HHSEARCH alignment of GI: 254780927 and SCOP domain: d1p88a_

Alignment
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]}
Probab=99.55  E-value=1.7e-14  Score=111.00  Aligned_cols=189  Identities=19%  Similarity=0.200  Sum_probs=118.0

Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-EEECCCCCCCCCCCEECCCCHHCCH--HHHHCCCC
Q ss_conf             66504444687332332220159989987501454432024432-1202554222234200143100001--00000124
Q gi|254780927|r  181 MMMVASLSHGDTSIYNAAREPEVVDLAHCLNSMGAKISGMGSST-ITIQGVTSLSGTRHRILPDRIEAGT--YAMAVAMT  257 (430)
Q Consensus       181 lLlaA~~a~G~t~I~~~~~~P~i~~t~~~L~~~Gv~I~~~~~~~-i~I~g~~~l~~~~~~V~~D~ssAa~--fl~Aaalt  257 (430)
                      .||+|.+++|+|+|+|+..++++..|+++|++||++|++.+++. +.+.+.............+..+.++  ++.++.+.
T Consensus         4 ali~AaLa~g~t~I~n~~~~~Dv~~~i~~L~~lG~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (216)
T d1p88a_           4 ALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALC   83 (216)
T ss_dssp             HHHHHHSEESEEEEESCCCSHHHHHHHHHHHHHTCEEEECSSSCCEEEECCSSSCCCSSCEEEECSSCHHHHHHHHHHTT
T ss_pred             HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEECCCC
T ss_conf             99999976998899689975899999999998499799837630357502333443223201012332201110110112


Q ss_pred             --CCCEEEECCCCC---CCCCHHHHHHHCCCCEEEECCCE--EEEEC-CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             --442010023456---42104688975267436744512--67532-67643157621535666421013466763135
Q gi|254780927|r  258 --GGDVILKMTDSS---LLKTVFKVMRQTGVDIDIIDEGI--RVRWN-GEKLRPVDVITAPFPGFPTDLQAQFMAMMCCA  329 (430)
Q Consensus       258 --~g~i~i~n~~~~---~~~~~l~iL~~mGa~i~~~~~~i--~V~~~-~~~l~~~di~~~~~pg~~~D~~p~la~laa~A  329 (430)
                        ...+.+.+-..-   +....++.|++||++++..++..  -+... ......++++....+    .....++.+|+++
T Consensus        84 ~~~~~~~~~~~~~~~~r~~~~~~~~l~~~G~~i~~~~~~~~~p~~~~g~~~~~~i~i~~~~Ss----q~~s~lllaa~~~  159 (216)
T d1p88a_          84 LGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS----QFLTALLMTAPLA  159 (216)
T ss_dssp             SSCCCEEEECCGGGGGSCCHHHHHHHHHTTCCEECSSSTTSSCCEECCCCCCCCEEEESSSCH----HHHHHHHHHSTTS
T ss_pred             CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCH----HHHHHHHHHHHHC
T ss_conf             456324430353323321013344454168589963675313577558876852998478871----8886899999755


Q ss_pred             CCCEEEEE--ECCHH--HHHHHHHHHHCCCEEEEEC-CEEEEECCCCCE
Q ss_conf             66416732--04656--7566788974885899978-969998889851
Q gi|254780927|r  330 AGISHITE--TIFEN--RFMHVQELVRLGARISLSG-QTARVEGVQGLR  373 (430)
Q Consensus       330 ~G~s~I~e--~i~e~--R~~~~~eL~klG~~v~~~~-d~l~I~G~~~l~  373 (430)
                      +|.+.|+.  .+.+.  |-....-|++||++|+.++ +.+.|.|+++++
T Consensus       160 ~~~t~I~~~~~~~s~~~v~~t~~~L~~~Ga~I~~~~~~~i~I~G~~~~~  208 (216)
T d1p88a_         160 PEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQ  208 (216)
T ss_dssp             SSCEEEEEESSCSCHHHHHHHHHHHHTTTCCEEECSSSCEEECSSCCEE
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCC
T ss_conf             8964899535457876399999999988996996689889990997445


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase
species: Escherichia coli [TaxId: 562]