RPSBLAST alignment of GI: 254780927 and protein with PDBid: 2pff

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 41.3 bits (96), Expect = 5e-04
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)

Query: 97   LVSKMRASFWVIGPLLAREGYARISLP-GGCAIGTRPVDLFVDSLKSLGVVIKIDGGYVD 155
             ++ M A  WV   L++  G   I  P G CA     VD+ V+++ S    I I GGY D
Sbjct: 1080 FINTMSA--WVNMLLISSSG--PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD 1135

Query: 156  ARVSSK----GLRGTSYTFPKVSVGATQVMMMVASLSHGDTSIYNAAREP-----EVVDL 206
             +         ++ TS T  +   G T      A +S   T+  N   E      +++  
Sbjct: 1136 FQEEGSFEFGNMKATSNTLEEFEHGRTP-----AEMSRPATTTRNGFMEAQGAGIQIIMQ 1190

Query: 207  AHCLNSMGAKISGM 220
            A     MG  I G+
Sbjct: 1191 ADLALKMGVPIYGI 1204