HHsearch alignment for GI: 254780928 and conserved domain: COG0442

>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=96.16  E-value=0.034  Score=33.46  Aligned_cols=90  Identities=17%  Similarity=0.010  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHH
Q ss_conf             99999999999998798399971899998899999987799899998872874881899787888364331120144320
Q gi|254780928|r  389 SLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWRE  468 (496)
Q Consensus       389 ~~~~~~~ia~~Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~  468 (496)
T Consensus       304 ~~~~~rd~~~~l~~~~~~~~~D~~~~~~~G~kl~~~e~ieVghif~lG~kyse~~~a~v~~r~g~~~~~-----------  372 (500)
T COG0442         304 VVNYGRDVAEPLEKLGIRVEGDDRSPDGPGFKLNIWEGIEVGHIFELGTKYSEAMNATVLDRDGKEQPK-----------  372 (500)
T ss_pred             HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHCEEEEEECCCCCCCE-----------
T ss_conf             430454445665430258842456899997211021024457799987412541804999248871441-----------


Q ss_pred             CCCCCEEECHHHHHHH-HHHHHHHHHH
Q ss_conf             2335103079999999-9999986420
Q gi|254780928|r  469 ARVAQITIPISELVST-VKKILQENKE  494 (496)
Q Consensus       469 ~~~~q~~v~~~~l~~~-~~~~l~~~~~  494 (496)
T Consensus       373 -----~mg~ygigvsr~v~a~ieq~~d  394 (500)
T COG0442         373 -----TMGCYGIGVSRLVAALLEQIHD  394 (500)
T ss_pred             -----EEECHHHHHHHHHHHHHHHHCC
T ss_conf             -----7870000034599999997362