HHsearch alignment for GI: 254780928 and conserved domain: KOG0554

Probab=96.49  E-value=0.0047  Score=38.98  Aligned_cols=114  Identities=18%  Similarity=0.250  Sum_probs=70.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEE---CCCCCEEEECCCCHHHHHH
Q ss_conf             5886689999999999999999859848016520228875202675543332216898---6999889998888389999
Q gi|254780928|r   17 DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQ---DDDGQWISLRYDLTAPLAR   93 (496)
Q Consensus        17 D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~---D~~g~~l~LRpDlT~~~aR   93 (496)
T Consensus       126 ~~~~av~RvRs~~~~a~h~ffq~~~F~~i~tPiiTtnDC----EGa-----GE~F~Vtt~~d~~~~fFgrp~fLTVSgQL  196 (446)
T KOG0554         126 AKVGAVLRVRSALAFATHSFFQSHDFTYINTPIITTNDC----EGA-----GEVFQVTTLTDYSKDFFGRPAFLTVSGQL  196 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCC----CCC-----CCEEEEEECCCCCCCCCCCCEEEEEECEE
T ss_conf             578999999989999999999875946733867634577----787-----40589874686543314885079971321


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHCCCCCCCC-CCCCCCCCCHHHHHCCCHH
Q ss_conf             999511205541123310133302587644-4211111000121000024
Q gi|254780928|r   94 YVAENFDTIVFPCRTYRIGPVFRNEKHGPG-RFRQFIQCDVDNVGSSAET  142 (496)
Q Consensus        94 ~~~~~~~~~~~p~k~yy~g~vfR~e~p~~G-r~REf~Q~g~eiiG~~~~~  142 (496)
T Consensus       197 hlEa~a~a--L-srvyt~gP~FRAE~s~t~rHLaEFwmlE~E~af~~sl~  243 (446)
T KOG0554         197 HLEAMACA--L-SRVYTFGPTFRAENSHTSRHLAEFWMLEAELAFAESLD  243 (446)
T ss_pred             HHHHHHHH--H-CCEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             59988755--2-32376166132267875467765652427887888888