HHsearch alignment for GI: 254780928 and conserved domain: PRK00476

Probab=98.13  E-value=1.6e-05  Score=55.04  Aligned_cols=96  Identities=29%  Similarity=0.546  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEE--EECCCCCEEEECCCCHHHH-HHHH-HHH
Q ss_conf             99999999999999998598480165202288752026755433322168--9869998899988883899-9999-951
Q gi|254780928|r   23 IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFS--LQDDDGQWISLRYDLTAPL-ARYV-AEN   98 (496)
Q Consensus        23 ~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~--f~D~~g~~l~LRpDlT~~~-aR~~-~~~   98 (496)
T Consensus       142 fr~Rs~i~~~iR~fl~~~gFiEVeTPiL~------~s~~eGA~---~-F~vpsr~~~~~fyaL~q--SPQLykq~L~vg-  208 (587)
T PRK00476        142 LKLRSKVTSAIRNFLDDNGFLEIETPILT------KSTPEGAR---D-YLVPSRVHPGKFYALPQ--SPQLFKQLLMVA-  208 (587)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEECCCCCC------CCCCCCCC---C-CCCCCCCCCCCEECCCC--CHHHHHHHHHHC-
T ss_conf             99999999999999997597400475432------56866664---4-30131057885513567--979999998851-


Q ss_pred             HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             12055411233101333025876444211111000121
Q gi|254780928|r   99 FDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNV  136 (496)
Q Consensus        99 ~~~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eii  136 (496)
T Consensus       209 --G--~-erVyeig~~FRnE~~~t~r~pEFt~lE~E~a  241 (587)
T PRK00476        209 --G--F-DRYYQIARCFRDEDLRADRQPEFTQIDIEMS  241 (587)
T ss_pred             --C--C-CEEEEECCCCCCCCCCCCCCCHHHEEEHHHH
T ss_conf             --7--5-5279964312388887666823423111111