HHsearch alignment for GI: 254780928 and conserved domain: PRK00484

Probab=98.94  E-value=1e-07  Score=69.31  Aligned_cols=98  Identities=27%  Similarity=0.375  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECC---CCCEEEECCCCHHHH--HHHHHH
Q ss_conf             999999999999999985984801652022887520267554333221689869---998899988883899--999995
Q gi|254780928|r   23 IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDD---DGQWISLRYDLTAPL--ARYVAE   97 (496)
Q Consensus        23 ~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~---~g~~l~LRpDlT~~~--aR~~~~   97 (496)
T Consensus       171 f~~Rs~ii~~iR~~l~~~gF~EVeTPiL~~~----~-gGA~Ar------pF~t~~n~l~~~~yL~~--SPqLylk~l~vg  237 (491)
T PRK00484        171 FRKRSKIISAIRRFLDNRGFLEVETPMLQPI----P-GGAAAR------PFITHHNALDIDLYLRI--APELYLKRLIVG  237 (491)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEEECCCCCCC----C-CCCCCC------CCCCCCCCCCCCEEECC--CHHHHHHHHHHC
T ss_conf             9999999999999998676899867877666----8-875667------65564456685544206--878987778762


Q ss_pred             HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf             112055411233101333025876444211111000121000
Q gi|254780928|r   98 NFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSS  139 (496)
Q Consensus        98 ~~~~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eiiG~~  139 (496)
T Consensus       238 G-----~-ervfeI~r~FR~E~~~~rH~pEFT~lE~e~af~d  273 (491)
T PRK00484        238 G-----F-ERVFEIGRNFRNEGIDTRHNPEFTMIEFYQAYAD  273 (491)
T ss_pred             C-----C-HHHEEHHHHHHCCCCCCCCCCCEEEEEEEEECCC
T ss_conf             7-----2-0222248766257554341840102136772479