HHsearch alignment for GI: 254780928 and conserved domain: PRK04173
>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=99.89 E-value=1.3e-20 Score=153.02 Aligned_cols=340 Identities=17% Similarity=0.180 Sum_probs=202.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCCEEEECCCHHHHHHHHCCCCCCCCC---------C-------------
Q ss_conf 9987658866899999999999999998--598480165202288752026755433---------3-------------
Q gi|254780928|r 12 PRGFADCPTKEIRIRNRILDSIRNIYEN--YGFDPIETPLLEYSDSLGKFLPDEDRP---------N------------- 67 (496)
Q Consensus 12 P~G~~D~~p~~~~~~~~i~~~l~~~f~~--~G~~~I~tP~lE~~~~~~~~~~~~~~~---------~------------- 67 (496)
T Consensus 29 ~ag~~DyGPlG~~LK~Ni~~~W~~~fv~~~~~~~~id~~ii~~~~V~~ASGH-v~~F~D~~v~c~~~~~r~RaD~Lie~~ 107 (460)
T PRK04173 29 LAGFWDYGPLGVELKNNIKKAWWKSFVQERPDVVGIDSPIIMPPEVWKASGH-VDNFSDPLVECKKCKKRYRADHLIEEY 107 (460)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCC-CCCCCCCEEECCCCCCEECHHHHHHHH
T ss_conf 1236155853599999999999999865258778861444489878544677-465676234757678363016776665
Q ss_pred --------------------------------------CCEEEEE----CCCCCEEEECCCCH----HHHHHHHHHHHHH
Q ss_conf --------------------------------------2216898----69998899988883----8999999951120
Q gi|254780928|r 68 --------------------------------------KGVFSLQ----DDDGQWISLRYDLT----APLARYVAENFDT 101 (496)
Q Consensus 68 --------------------------------------k~~y~f~----D~~g~~l~LRpDlT----~~~aR~~~~~~~~ 101 (496)
T Consensus 108 ~~~~~~~~~~~~l~~~i~~~~i~cP~cg~~~lt~~~~FNLMF~T~iG~~~~~~~~~YLRPETAQGiFvnFk~v~~~~--r 185 (460)
T PRK04173 108 LGIDAEGLSNEELEELIEENNIKCPECGGENWTEVRQFNLMFKTFIGPVEDSSSLGYLRPETAQGIFVNFKNVLRTA--R 185 (460)
T ss_pred HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHC--C
T ss_conf 32012335899999999970887999999677544312055575135566777502316044104566119999971--7
Q ss_pred CCCCHHHHHHHHHHCCC-CCCCC--CCCCCCCCCHHHHHCCCHHHH--HHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
Q ss_conf 55411233101333025-87644--421111100012100002457--88999999999751888777113036605589
Q gi|254780928|r 102 IVFPCRTYRIGPVFRNE-KHGPG--RFRQFIQCDVDNVGSSAETAD--AEMCMMMADTLEAVGIKRNDYHIGINNRKILD 176 (496)
Q Consensus 102 ~~~p~k~yy~g~vfR~e-~p~~G--r~REf~Q~g~eiiG~~~~~~D--aEii~l~~~~l~~lgl~~~~~~I~in~~~il~ 176 (496)
T Consensus 186 ~KlPFgiaQIGKaFRNEIsPr~~lfR~REFeQmEiE~F~~P~~~~e~~~yw~~~~~~fl~~lGi~~~~lR~r-~h~---- 260 (460)
T PRK04173 186 KKLPFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDEEWFAYWIALRKNFLLDLGIDPENLRFR-EHL---- 260 (460)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEE-ECC----
T ss_conf 788804310040012430655451223455552433105867458999999999999999839988994786-306----
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99998325603564334555333220012896789986210165003555304899977899888740478568899899
Q gi|254780928|r 177 GILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256 (496)
Q Consensus 177 ~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 256 (496)
T Consensus 261 ---------~~-elAH-----Ya----------------------------------~~~~D~E~~~~--~G-------- 281 (460)
T PRK04173 261 ---------PE-ELAH-----YS----------------------------------KATWDIEYKFP--FG-------- 281 (460)
T ss_pred ---------CH-HHCC-----CC----------------------------------HHHEEEEEECC--CC--------
T ss_conf ---------13-4200-----02----------------------------------20055899458--98--------
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 86035732588899999999998750888443001101001221234124899854666776766631011003232355
Q gi|254780928|r 257 ELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDG 336 (496)
Q Consensus 257 ~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~~~~~aI~~GGRYD~ 336 (496)
T Consensus 282 ------------w~E---------~~Gi-a~RtdyDL~~H---~~~Sg~~L~~~d~----------------~~~~k--- 317 (460)
T PRK04173 282 ------------WGE---------LEGI-ANRTDYDLSRH---SKHSGEDLSYFDQ----------------ETGEK--- 317 (460)
T ss_pred ------------EEE---------EEEE-CCCCHHHHHHH---HHHCCCCEEEEEC----------------CCCCE---
T ss_conf ------------288---------7664-06421027889---8744887179822----------------55856---
Q ss_pred CCCCCCCCCCCC-CEEEECCHHHHHHHHHCCC--------------CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 211123456774-2133110168999997368--------------7766555771489982697689999999999999
Q gi|254780928|r 337 LVSRFKGQNVPA-TGFSIGISRLIVALKSLES--------------STNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401 (496)
Q Consensus 337 L~~~f~~~~~pa-vGfaigverl~~~l~~~~~--------------~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~Lr 401 (496)
T Consensus 318 --------~iPhVIEpS~GvdR~~la~L~~ay~ee~~~~~e~R~vL~l~p~lAPikvaVlPL~kk~~l~~~a~~i~~~L~ 389 (460)
T PRK04173 318 --------YIPYVIEPSFGLDRLFLAFLEDAYTEEELGDGDKRTVLRLPPALAPVKVAVLPLVKKDKLSEKAREIYAELR 389 (460)
T ss_pred --------ECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf --------134056404671089999998765200047875058996266457716999965566125899999999998
Q ss_pred HCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHHHH
Q ss_conf 87983999718999988999999877998999988728748818997878883643311201443202335103079999
Q gi|254780928|r 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481 (496)
Q Consensus 402 ~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~~l 481 (496)
T Consensus 390 ~~~~~~~~D~-sg-sIGkRY~R~DeiGtPf~ITiD~~tled~tVTiR~RDt~~------------------Q~Rv~i~~l 449 (460)
T PRK04173 390 KDGFNVDYDD-SG-SIGKRYRRQDEIGTPFCVTVDFDTLEDNTVTIRDRDTME------------------QVRVKIDEL 449 (460)
T ss_pred HCCCEEEEEC-CC-CHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCC------------------EEEEEHHHH
T ss_conf 7797599968-99-854544531026898799976886768948978358753------------------489899999
Q ss_pred HHHHHHHHH
Q ss_conf 999999998
Q gi|254780928|r 482 VSTVKKILQ 490 (496)
Q Consensus 482 ~~~~~~~l~ 490 (496)
T Consensus 450 ~~~l~~~~~ 458 (460)
T PRK04173 450 EDYLAEKLK 458 (460)
T ss_pred HHHHHHHHC
T ss_conf 999999866