HHsearch alignment for GI: 254780928 and conserved domain: PRK04483
>PRK04483 threonyl-tRNA synthetase; Validated.
Probab=100.00 E-value=1.4e-33 Score=237.20 Aligned_cols=362 Identities=14% Similarity=0.207 Sum_probs=233.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHH
Q ss_conf 79987658866899999999999999998598480165202288752026755433322168986999889998888389
Q gi|254780928|r 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90 (496)
Q Consensus 11 ~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~ 90 (496)
T Consensus 259 ~~pG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw-~~SGH~~~Y~e~Mf-~~~~~~~~~~lKPMNCP~ 336 (634)
T PRK04483 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLW-QKSGHWDNYQDAMF-FTESEKRTYAVKPMNCPG 336 (634)
T ss_pred CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHH-HHCCCHHHHHHCCC-EECCCCCEEEECCCCCHH
T ss_conf 7886438816689999999999999999829959988625137787-62561645530371-342554035515768564
Q ss_pred HHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHH-HH-HHHHHHHHHHHHCCCCCC
Q ss_conf 99999951-12055411233101333025876--44--42111110001210000245-78-899999999975188877
Q gi|254780928|r 91 LARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETA-DA-EMCMMMADTLEAVGIKRN 163 (496)
Q Consensus 91 ~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~-Da-Eii~l~~~~l~~lgl~~~ 163 (496)
T Consensus 337 H~~if~~~~rSYRdLPlR~aE~g~~~R~E~SG~L~GL~RvR~FtqdDaHIFc~~dQi~~Ei~~~l~~~~~vy~~fGf~-- 414 (634)
T PRK04483 337 HVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGFD-- 414 (634)
T ss_pred HHHHHHCCCCCHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_conf 879987177444434366554330220567765457456889988983356389999999999999999999863995--
Q ss_pred CCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 71130366055899999832560356433455533322001289678998621016500355530489997789988874
Q gi|254780928|r 164 DYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243 (496)
Q Consensus 164 ~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (496)
T Consensus 415 ~~~~~lStrpe-----k~~G~~~~--------------------W~~AE~~L~~al--------~~~g~~---------y 452 (634)
T PRK04483 415 DIQIKIALRPE-----KRLGDDAT--------------------WDKAEAALRSAL--------GVCGVE---------W 452 (634)
T ss_pred EEEEEECCCCC-----CCCCCHHH--------------------HHHHHHHHHHHH--------HHCCCC---------C
T ss_conf 38999635762-----34587556--------------------889999999999--------974987---------0
Q ss_pred HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC-CCCEEEEEEECCCCCCCCCCC
Q ss_conf 0478568899899860357325888999999999987508884430011010012212-341248998546667767666
Q gi|254780928|r 244 LSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEY-YTGCVYEAILGFPVMNEKQKP 322 (496)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdY-YTG~vFE~~~~~~~~~~~~~~ 322 (496)
T Consensus 453 ~~~~GegAFYG--PKID--~~v~Dalg---------R~~q--~~TiQlDf~lP~rF~l~Y~~----------~dg~~~rP 507 (634)
T PRK04483 453 QELPGEGAFYG--PKIE--YHLKDAIG---------RTWQ--LGTMQVDFMMPGRLGAEYVD----------ENSQKKHP 507 (634)
T ss_pred EECCCCCCEEC--CCEE--EEEEECCC---------CEEE--CCEEEEECCCCCCCCCEEEC----------CCCCCCCE
T ss_conf 77679701056--6228--99992799---------8674--11457621453436778985----------68983860
Q ss_pred CCE-EEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 310-1100323235521112345677421331101689999973-68776655577148998269768999999999999
Q gi|254780928|r 323 VVF-GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQML 400 (496)
Q Consensus 323 ~~~-~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~L 400 (496)
T Consensus 508 vmIHRAi--------------------lG---S~ERfi~iLiEh~~G~fP~WLaP~Qv~iipv--~~~~~~ya~~v~~~L 562 (634)
T PRK04483 508 VMLHRAI--------------------VG---SMERFIGILIEHHAGAFPAWLAPVQVVVANI--TDAQAEYVDSVRKTL 562 (634)
T ss_pred EEEEECC--------------------CC---CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC--CHHHHHHHHHHHHHH
T ss_conf 8999457--------------------67---7899999999973798985768735899955--804899999999999
Q ss_pred HHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHHH
Q ss_conf 98798399971899998899999987799899998872874881899787888364331120144320233510307999
Q gi|254780928|r 401 RTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480 (496)
Q Consensus 401 r~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~~ 480 (496)
T Consensus 563 ~~~g~rv~vD~~-~e~lg~KIR~a~~~kiPy~lVvG~kE~e~~~VsvR~r~~~~~------------------~~~~~~~ 623 (634)
T PRK04483 563 ANQGFRVSADLR-NEKIGYKIREHTLQRVPYLLVVGDREKENGAVAVRTRSGEDL------------------GTMTVSA 623 (634)
T ss_pred HHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECHHHHHCCEEEEEECCCCCC------------------CEEEHHH
T ss_conf 978978999789-985749999874338998999812566459789997789745------------------7156999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780928|r 481 LVSTVKK 487 (496)
Q Consensus 481 l~~~~~~ 487 (496)
T Consensus 624 fi~~l~~ 630 (634)
T PRK04483 624 FIERLQA 630 (634)
T ss_pred HHHHHHH
T ss_conf 9999998