HHsearch alignment for GI: 254780928 and conserved domain: PRK05431
>PRK05431 seryl-tRNA synthetase; Provisional.
Probab=98.44 E-value=2.1e-06 Score=60.79 Aligned_cols=145 Identities=18% Similarity=0.228 Sum_probs=102.4
Q ss_pred CCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHH
Q ss_conf 98765--8866899999999999999998598480165202288752026755433322168986999889998888389
Q gi|254780928|r 13 RGFAD--CPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAP 90 (496)
Q Consensus 13 ~G~~D--~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~ 90 (496)
T Consensus 158 SGsRF~~Lkg~~A~LerALi~f~ld~~~~~Gy~~v~~P~lv~~~~~~gtGqlP-kfe~~~Y~i~~---~dl~Li~TAEvp 233 (422)
T PRK05431 158 SGSRFYVLKGDGARLERALIQFMLDLHTEEGYTEVIPPYLVNEESMYGTGQLP-KFEEDLFKIED---DDLYLIPTAEVP 233 (422)
T ss_pred CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCC-CCHHHHHHHCC---CCEEEECCCCCC
T ss_conf 07870460048999999999999999998799799673763678874453797-44877541058---871760565321
Q ss_pred HHHHHHHH-HHHCCCCHHHHHHHHHHCCCCC-----CCCCCCCCCCCC-HHHHHCCCH----HHHHHHHHHHHHHHHHCC
Q ss_conf 99999951-1205541123310133302587-----644421111100-012100002----457889999999997518
Q gi|254780928|r 91 LARYVAEN-FDTIVFPCRTYRIGPVFRNEKH-----GPGRFRQFIQCD-VDNVGSSAE----TADAEMCMMMADTLEAVG 159 (496)
Q Consensus 91 ~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p-----~~Gr~REf~Q~g-~eiiG~~~~----~~DaEii~l~~~~l~~lg 159 (496)
T Consensus 234 L~~~~~~eil~~~~LPik~~~~S~CFR~EAGs~GkdtrGl~Rv-HQF~KVE~f~~~~pe~S~~~~e~~~~~~e~i~~~L~ 312 (422)
T PRK05431 234 LTNLHRDEILDEEELPIKYTAYSPCFRSEAGSAGRDTRGLIRQ-HQFDKVELVKFTKPEDSYAELEELTGNAEEILQKLE 312 (422)
T ss_pred HHHHHHCCCCCHHHCCHHHEEECCHHHHCCCCCCCCCCCCEEE-EEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 2334401133654398445278836530313367556761244-300003433535867799999999999999998759
Q ss_pred CCC
Q ss_conf 887
Q gi|254780928|r 160 IKR 162 (496)
Q Consensus 160 l~~ 162 (496)
T Consensus 313 lpy 315 (422)
T PRK05431 313 LPY 315 (422)
T ss_pred CCC
T ss_conf 850