HHsearch alignment for GI: 254780928 and conserved domain: PRK12304
>PRK12304 thrS threonyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=4e-33 Score=234.25 Aligned_cols=367 Identities=17% Similarity=0.236 Sum_probs=241.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHH
Q ss_conf 37998765886689999999999999999859848016520228875202675543332216898699988999888838
Q gi|254780928|r 10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89 (496)
Q Consensus 10 ~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~ 89 (496)
T Consensus 226 ~~g~G~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw-~~SGH~~~Y~e~Mf-~~~~d~~~y~lKPMNCP 303 (604)
T PRK12304 226 EIGAGLPIWLPKGARLRSKLEHLLYKAHRLRGYEPVRGPEILKSDVW-KISGHYANYKENMY-FTTIDEQEYGIKPMNCV 303 (604)
T ss_pred CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHH-HCCCHHHHHCCCCC-EEECCCCEEECCCCCCH
T ss_conf 45887536837754999999999999999829968038654558887-30551532105764-45057743303677957
Q ss_pred HHHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHHH-H-HHHHHHHHHHHHCCCCC
Q ss_conf 999999951-12055411233101333025876--44--421111100012100002457-8-89999999997518887
Q gi|254780928|r 90 PLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETAD-A-EMCMMMADTLEAVGIKR 162 (496)
Q Consensus 90 ~~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~D-a-Eii~l~~~~l~~lgl~~ 162 (496)
T Consensus 304 ~H~~if~~~~rSYRdLPlR~aEfg~~hR~E~SG~L~GL~RvR~FtqDDaHIFc~~dQi~~Ei~~~l~~~~~vy~~fGf~- 382 (604)
T PRK12304 304 GHIKVYQSDLRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEEVLEILDFVDKIMKAFDFS- 382 (604)
T ss_pred HHHHHHHCCCCCHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCE-
T ss_conf 4999986277444435555454353202677766346455778977884465489999999999999999999745961-
Q ss_pred CCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 77113036605589999983256035643345553332200128967899862101650035553048999778998887
Q gi|254780928|r 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242 (496)
Q Consensus 163 ~~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (496)
T Consensus 383 --~~~~lstrpe-----k~~G~de~W~~A----------------e~~L~~aL~~~g~----~y~~~~GegAFYGPKID- 434 (604)
T PRK12304 383 --YEMEISTKPA-----KAIGDDEVWEKA----------------TKALKEALDENGL----KYGIDEGGGAFYGPKID- 434 (604)
T ss_pred --EEEEECCCCC-----CCCCCHHHHHHH----------------HHHHHHHHHHCCC----CCCCCCCCCCCEECCEE-
T ss_conf --9999768863-----347988999999----------------9999999996499----86657485520321101-
Q ss_pred HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC-CCCCEEEEEEECCCCCCCCCC
Q ss_conf 4047856889989986035732588899999999998750888443001101001221-234124899854666776766
Q gi|254780928|r 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE-YYTGCVYEAILGFPVMNEKQK 321 (496)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLd-YYTG~vFE~~~~~~~~~~~~~ 321 (496)
T Consensus 435 --------------------~~v~DalgR~wq-----------~~TIQlDf~lPeRF~l~Y~~----------~dg~~~r 473 (604)
T PRK12304 435 --------------------IKITDALKRKWQ-----------CGTIQVDFNLPERFKLEYTD----------ENNEKKQ 473 (604)
T ss_pred --------------------EEEECCCCCHHH-----------HHHHHHHHHCHHHCCCEEEC----------CCCCCCC
T ss_conf --------------------798622488988-----------77888876364315738988----------8998367
Q ss_pred CCCE-EEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 6310-1100323235521112345677421331101689999973-6877665557714899826976899999999999
Q gi|254780928|r 322 PVVF-GSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQM 399 (496)
Q Consensus 322 ~~~~-~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~ 399 (496)
T Consensus 474 PVmIHRAilG-----------------------S~ERfiaiLiEh~~G~~P~WLaP~Qv~IipV--~~~~~~YA~~v~~~ 528 (604)
T PRK12304 474 PVMIHRAILG-----------------------SFERFIGILTEHFAGEFPFFIAPTQVAIVPI--NEAHHVYAKELQKE 528 (604)
T ss_pred CEEEEEECCC-----------------------CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC--CHHHHHHHHHHHHH
T ss_conf 7899720357-----------------------7899999999980899985757616899960--77789999999999
Q ss_pred HHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHH
Q ss_conf 99879839997189999889999998779989999887287488189978788836433112014432023351030799
Q gi|254780928|r 400 LRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPIS 479 (496)
Q Consensus 400 Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~ 479 (496)
T Consensus 529 L~~~girv~~D~~-~e~l~~KIR~a~~~kiPy~lVvGdkE~~~~~vsvR~r~~~~------------------~~~~~~~ 589 (604)
T PRK12304 529 LLKLDIDSEVYDK-NESLNKKIRTAEKQRVPMILVLGDEEVENRSVAIRDRRARE------------------QYNLSLD 589 (604)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEEEHH
T ss_conf 9988987997389-99776999997643899899984467655968899778874------------------5706299
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999864
Q gi|254780928|r 480 ELVSTVKKILQEN 492 (496)
Q Consensus 480 ~l~~~~~~~l~~~ 492 (496)
T Consensus 590 efi~~l~~eI~~~ 602 (604)
T PRK12304 590 EFLNLVKEKMSEV 602 (604)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999997442