HHsearch alignment for GI: 254780928 and conserved domain: PRK12420
>PRK12420 histidyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=732.51 Aligned_cols=417 Identities=31% Similarity=0.528 Sum_probs=356.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCC
Q ss_conf 71037998765886689999999999999999859848016520228875202675543332216898699988999888
Q gi|254780928|r 7 LRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYD 86 (496)
Q Consensus 7 ~~~~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpD 86 (496)
T Consensus 2 m~~q~~rG~rD~lp~e~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~~elf~~~~g~~~~i~kemy~f~D~~gr~l~LRPe 81 (421)
T PRK12420 2 MEMKNVKGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYTLQDQGKRDLALRYD 81 (421)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCHHHHHEEEEECCCCCEEEECCC
T ss_conf 98889998887899999999999999999999859947247650118764244788442241107888189987985677
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 83899999995112055411233101333025876444211111000121000024578899999999975188877711
Q gi|254780928|r 87 LTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYH 166 (496)
Q Consensus 87 lT~~~aR~~~~~~~~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eiiG~~~~~~DaEii~l~~~~l~~lgl~~~~~~ 166 (496)
T Consensus 82 ~Ta~iaR~~a~~-~~~~~P~k~~y~g~vfR~erpq~GR~ReF~Q~GvEiiG~~~~~aDaEiI~la~~~l~~lgl---~~~ 157 (421)
T PRK12420 82 LTIPFAKVVAMN-PNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRTLNL---EVT 157 (421)
T ss_pred CCHHHHHHHHHC-CCCCCCEEEEEECCEEECCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCC---CEE
T ss_conf 658999999977-5777874588876778538987885551343575420788778899999999999996598---659
Q ss_pred EECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 30366055899999832560356433455533322001289678998621016500355530489997789988874047
Q gi|254780928|r 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSI 246 (496)
Q Consensus 167 I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (496)
T Consensus 158 i~i~~~~l~~~ll~~~~~~~e~----~~~~~~~ldk~~k~~~~~~~~~l~~~------------~~~~~~~~~~~~~~~~ 221 (421)
T PRK12420 158 IQYNNRKLLNGILQAINIPTEL----TSDVILSLDKIEKIGIDGVRKDVLER------------GISEEMADTICNTVLS 221 (421)
T ss_pred EEECCHHHHHHHHHHCCCCHHH----HHHHHHHHHHHHHHCHHHHHHHHHHC------------CCCHHHHHHHHHHHHC
T ss_conf 9955299999888870999999----99999998876531678899998866------------8888999879998735
Q ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEE
Q ss_conf 85688998998603573258889999999999875088844300110100122123412489985466677676663101
Q gi|254780928|r 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFG 326 (496)
Q Consensus 247 ~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~~~~~ 326 (496)
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~e~~~~l~~l~~~L~~~gi~-~~i~~D~~lVRGLdYYTg~VFE~~~~~--------~~~~~ 291 (421)
T PRK12420 222 CLQLSIADFKEAFN-NPLVADGVNELQQLQQYLIALGIN-ENTIFNPFLARGLTMYTGTVYEIFLKD--------GSITS 291 (421)
T ss_pred CCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHCCCC-CEEEECHHHHCCCCCEEEEEEEEEECC--------CCCCC
T ss_conf 68013899863205-855599999999999999976999-518776767416664200589999558--------76443
Q ss_pred EECCCCCCCCCCCCCCCCC--CCCCEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHC-
Q ss_conf 1003232355211123456--7742133110168999997368776655577148998269768999999999999987-
Q gi|254780928|r 327 SVGGGGRYDGLVSRFKGQN--VPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA- 403 (496)
Q Consensus 327 aI~~GGRYD~L~~~f~~~~--~pavGfaigverl~~~l~~~~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~Lr~~- 403 (496)
T Consensus 292 ~i~gGGRYD~Li~~fgg~~~~~PavGfa~Gierl~~~L~~~~~~----~~~~~v~v~~~~~~----~~a~~ia~~LR~~~ 363 (421)
T PRK12420 292 SIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQKETI----SSTADVFIIPLGTE----LQCLQIAQQLRSTT 363 (421)
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCC----CCCCCEEEEECCCH----HHHHHHHHHHHHCC
T ss_conf 44356650548988189989997479985199999998550457----98898899978778----99999999998459
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCC
Q ss_conf 98399971899998899999987799899998872874881899787888364331120
Q gi|254780928|r 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKN 462 (496)
Q Consensus 404 Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~ 462 (496)
T Consensus 364 gi~~~~~~~-~~~lkkqlk~A~k~~~~~~iiiG~~E~~~~~v~lK~l~tg~q~~v~l~s 421 (421)
T PRK12420 364 SLKVELELA-GRKLKRALNYANKENIPYVLIIGEEELSTETVMLRNMKEGSEVKVPLSS 421 (421)
T ss_pred CCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEECCCCCEEEEECCC
T ss_conf 966999659-9999999999988799999998763887897899988999737982889