HHsearch alignment for GI: 254780928 and conserved domain: PRK12820
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional.
Probab=98.38 E-value=2.7e-06 Score=60.05 Aligned_cols=99 Identities=25% Similarity=0.393 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999859848016520228875202675543332216898699988999888838999999951120554
Q gi|254780928|r 25 IRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVF 104 (496)
Q Consensus 25 ~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~~aR~~~~~~~~~~~ 104 (496)
T Consensus 158 ~Rskv~~~iR~~l~~~gF~EVETP~L------~~stpEGAr--dflvPsr~~~~~fyaLpQ--SPQlyKQlLMv-gG~-- 224 (706)
T PRK12820 158 KRHRIIKCARDFLDSRGFLEIETPIL------TKSTPEGAR--DYLVPSRIHPKEFYALPQ--SPQLFKQLLMI-AGF-- 224 (706)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCEE------CCCCCCCCC--CCCCCEECCCCCEECCCC--CHHHHHHHHHH-CCC--
T ss_conf 99999999999998779889668704------456753245--750024458876500566--82999999986-286--
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 112331013330258764442111110001210
Q gi|254780928|r 105 PCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVG 137 (496)
Q Consensus 105 p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eiiG 137 (496)
T Consensus 225 -dRyFqIarcFRdEd~r~dRqPEFTqlDiEmSF 256 (706)
T PRK12820 225 -ERYFQLARCFRDEDLRPNRQPEFTQLDIEASF 256 (706)
T ss_pred -CEEEEEEEEECCCCCCCCCCCCEEEEEEEHHC
T ss_conf -61799600112899998879834068742134