RPSBLAST alignment of GI: 254780928 and protein with PDBid: 1nj8
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Length = 459
Score = 48.3 bits (114), Expect = 4e-06
Identities = 29/156 (18%), Positives = 48/156 (30%), Gaps = 16/156 (10%)
Query: 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGV 70
LP GF +IR + IRN+ + G D P+L D L K V
Sbjct: 34 LPYGF--------KIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEV 85
Query: 71 FSL----QDDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHGPG-- 123
+ + + ++LR P+ + P + Y+I FR E
Sbjct: 86 YWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPL 145
Query: 124 -RFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAV 158
R R+ + + S + +
Sbjct: 146 IRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKF 181