RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3ial
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Length = 518
Score = 87.8 bits (217), Expect = 5e-18
Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 19/189 (10%)
Query: 7 LRAEL------PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
AEL +G + N I+ Y G I P + L K
Sbjct: 33 DAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKES 92
Query: 61 PDEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVF 115
F ++ + ++LR + ++ P + ++ +F
Sbjct: 93 DHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIF 152
Query: 116 RNEKHGP---GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
R+E R R+ + ++AE A +++ + +
Sbjct: 153 RHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDEL-----CFKGQ 207
Query: 173 KILDGILEK 181
K+ ++
Sbjct: 208 KLRRVCWDR 216