RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3ial

>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Length = 518

 Score = 62.8 bits (152), Expect = 2e-10
 Identities = 32/258 (12%), Positives = 77/258 (29%), Gaps = 19/258 (7%)

Query: 247 DLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCV 306
           D    + + ++++    + E  F    +      +             +  G    T  +
Sbjct: 182 DAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPCGRVLQTAGI 241

Query: 307 YE--------AILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRL 358
           +           + +     +         G   R         G +         I+ +
Sbjct: 242 HNLGQRFSSTFDILYANKANESVHPYLTCAGISTRVLACALSIHGDS-GGLVLPPLIAPI 300

Query: 359 IVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFG 418
            V +  +     N +E    ++  ++         ++   +    G+R  +    SK+ G
Sbjct: 301 HVVIIPIGCGKKNNQESDQQVLGKVN---------EIADTLKSKLGLRVSIDDDFSKSMG 351

Query: 419 NQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPI 478
           ++L Y + +  PL I  G  + + G   +     GK+  R I   E  + +         
Sbjct: 352 DKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEVMKVSS-HTTENHE 410

Query: 479 SELVSTVKKILQENKEEI 496
             + + +K  L   K  +
Sbjct: 411 LVVKNVIKDELDAYKARL 428