RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3od1

>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Length = 400

 Score =  239 bits (611), Expect = 9e-64
 Identities = 94/436 (21%), Positives = 171/436 (39%), Gaps = 46/436 (10%)

Query: 1   MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
           M K      E P G  D   +  + +  I D +      +G+D IETP LEY +++G   
Sbjct: 4   MSKPFMF--EKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVS 61

Query: 61  PDEDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKH 120
              D+    +F L D  G  + LR D+TAP+AR VA +     +P R      V+R +++
Sbjct: 62  AILDQQ---LFKLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQN 118

Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
             G+  +F Q  V+ +G    +AD E+  +M   L+  G   +++ + I +   ++ +L 
Sbjct: 119 EGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAG--LSEFKVAIGHVGYVNALLM 176

Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
            +  +       R    R + + +  G +     L     D                  +
Sbjct: 177 DVVGNEQRADRLR----RFLYEKNYVGYREHVKSLNLSTID---------------KSRL 217

Query: 241 VSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLE 300
           ++ LS+   ++  E    +  T  G+    E+  + E++   G  S  +K   T+V  + 
Sbjct: 218 MNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKLYEVLESYGA-SEYVKFDLTLVLHMS 276

Query: 301 YYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIV 360
           YYTG V+E               +   +  GGRYD L+S+F  +   ATGF + I  L+ 
Sbjct: 277 YYTGVVFEGY----------GNRLGVPLCSGGRYDELLSKF-HRPAQATGFGVRIDLLVE 325

Query: 361 ALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQ 420
           AL     S  + +      I   +   +   +     +  R  G    +   +       
Sbjct: 326 ALNGEIISNGHEQ----TCILFSN---ERRFEAIELARKKRANGEAVVLQDLAGVTD-VD 377

Query: 421 LKYADRRNCPLAIIQG 436
              ++ ++    I   
Sbjct: 378 AMSSNYQDVIYCIGTA 393