HHsearch alignment for GI: 254780930 and conserved domain: COG1538

>COG1538 TolC Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].
Probab=99.80  E-value=3.5e-17  Score=130.08  Aligned_cols=183  Identities=18%  Similarity=0.176  Sum_probs=162.4

Q ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC--------CCCCCCCCCCCCCHHHHH
Q ss_conf             999999999708998999999999999999875420530111011245665554--------444432111011001234
Q gi|254780930|r   61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--------NSTGQLDSDWKIDLFGQR  132 (452)
Q Consensus        61 L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~~--------~~~~~~~~s~~ldl~G~~  132 (452)
T Consensus       257 p~~~~~~~l~~rpdi~aA~~~l~aA~a~i~~a~a~~~P~lsL~a~~~~~~~~~~~~~~~~~~~~~~g~~lslPif~gG~~  336 (457)
T COG1538         257 PDGLPSEALARRPDILAAEAQLAAANANIGAARAAFLPTLSLTASYGRSSTNLSGLFGSSSRSWSVGPGLSLPIFDGGRL  336 (457)
T ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCH
T ss_conf             23349999982988999999999999889999744268545751002135666534467654147745789863688531


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5-778888777655567999999999999987666677788999999999999999987876554323456777653222
Q gi|254780930|r  133 R-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE  211 (452)
Q Consensus       133 ~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~  211 (452)
T Consensus       337 ~a~v~~A~a~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~a~~~~v~~a~~~~~~~~~~y~~G~~t~ldvL~Aq~~  416 (457)
T COG1538         337 RARVRQAEAQYDAALAQYEQTVLTARQEVADALAALEAALEQLQALRQAVEAAQEALELARERYQAGVRTLLDVLDAQRT  416 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             68999999999999999999999999999999999999999999999999999999999999997586179999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             35579899999985688887687763999213
Q gi|254780930|r  212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATE  243 (452)
Q Consensus       212 ~~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~  243 (452)
T Consensus       417 l~~a~~~~~~a~~~~~~a~~~L~~alG~~~~~  448 (457)
T COG1538         417 LLQARQALLQARYDYLVALVNLYKALGGGWDE  448 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999999999999999999985688501