HHsearch alignment for GI: 254780930 and conserved domain: COG1538
>COG1538 TolC Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].
Probab=99.80 E-value=3.5e-17 Score=130.08 Aligned_cols=183 Identities=18% Similarity=0.176 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC--------CCCCCCCCCCCCCHHHHH
Q ss_conf 999999999708998999999999999999875420530111011245665554--------444432111011001234
Q gi|254780930|r 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--------NSTGQLDSDWKIDLFGQR 132 (452)
Q Consensus 61 L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~~--------~~~~~~~~s~~ldl~G~~ 132 (452)
T Consensus 257 p~~~~~~~l~~rpdi~aA~~~l~aA~a~i~~a~a~~~P~lsL~a~~~~~~~~~~~~~~~~~~~~~~g~~lslPif~gG~~ 336 (457)
T COG1538 257 PDGLPSEALARRPDILAAEAQLAAANANIGAARAAFLPTLSLTASYGRSSTNLSGLFGSSSRSWSVGPGLSLPIFDGGRL 336 (457)
T ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCH
T ss_conf 23349999982988999999999999889999744268545751002135666534467654147745789863688531
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5-778888777655567999999999999987666677788999999999999999987876554323456777653222
Q gi|254780930|r 133 R-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 (452)
Q Consensus 133 ~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~ 211 (452)
T Consensus 337 ~a~v~~A~a~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~a~~~~v~~a~~~~~~~~~~y~~G~~t~ldvL~Aq~~ 416 (457)
T COG1538 337 RARVRQAEAQYDAALAQYEQTVLTARQEVADALAALEAALEQLQALRQAVEAAQEALELARERYQAGVRTLLDVLDAQRT 416 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 68999999999999999999999999999999999999999999999999999999999999997586179999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 35579899999985688887687763999213
Q gi|254780930|r 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 (452)
Q Consensus 212 ~~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~ 243 (452)
T Consensus 417 l~~a~~~~~~a~~~~~~a~~~L~~alG~~~~~ 448 (457)
T COG1538 417 LLQARQALLQARYDYLVALVNLYKALGGGWDE 448 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999985688501