HHsearch alignment for GI: 254780930 and conserved domain: PRK09465

>PRK09465 tolC outer membrane channel protein; Reviewed.
Probab=99.85  E-value=5.6e-19  Score=141.84  Aligned_cols=185  Identities=17%  Similarity=0.176  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC--------------CCCCCCCCCCCCCC
Q ss_conf             7999999999708998999999999999999875420530111011245665--------------55444443211101
Q gi|254780930|r   60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN--------------LKTNSTGQLDSDWK  125 (452)
Q Consensus        60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~--------------~~~~~~~~~~~s~~  125 (452)
T Consensus       230 ~~~~~~~~A~~~~p~l~~a~~~~~~A~~~~~~aka~~~P~l~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ls~P  309 (446)
T PRK09465        230 SVNALLKEAEKRNLSLLTARLSQDIAREQIRLAQAGHLPTLDLTASYNISDTSYSGSKTNSQYDDSDMGQNKVGLNLSLP  309 (446)
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf             89999999986699999999999999999999972769859999764013555666556665666776754899999987


Q ss_pred             CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             10012345-77888877765556799999999999998766667778899999999999999998787655432345677
Q gi|254780930|r  126 IDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS  204 (452)
Q Consensus       126 ldl~G~~~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d  204 (452)
T Consensus       310 if~Gg~~~a~v~~A~~~~~~a~~~l~~~~~~v~~~v~~a~~~~~~a~~~i~a~~~~v~~A~~~l~~~~~~y~~G~~t~ld  389 (446)
T PRK09465        310 LYSGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYEQSVVSAQSALDATEAGFEVGTRTIVD  389 (446)
T ss_pred             EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             33787335899999999999999999999999999999999999999999999999999999999999999779964999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             7653222355798999999856888876877639992130
Q gi|254780930|r  205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF  244 (452)
Q Consensus       205 ~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~  244 (452)
T Consensus       390 vLdAq~~l~~A~~~l~~A~yd~~~a~~~L~~a~G~L~~~~  429 (446)
T PRK09465        390 VLDATRTLYDAKRQLSNARYNYIINQLNLKQALGTLNEQD  429 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             9999999999999999999999999999999858999999