HHsearch alignment for GI: 254780930 and conserved domain: PRK11459
>PRK11459 multidrug resistance outer membrane protein MdtQ; Provisional.
Probab=99.66 E-value=6.1e-14 Score=108.90 Aligned_cols=99 Identities=14% Similarity=0.060 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 66567799999999999999999999999999999999999999999999999999999999998718832899999999
Q gi|254780930|r 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 (452)
Q Consensus 340 ~~a~i~~a~~~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~ 419 (452)
T Consensus 373 a~A~~~~A~~~Y~~tvl~A~~eVe~Al~~~~~~~~~~~~~~~~~~~a~~a~~la~~ry~~G~~~~l~vL~Aq~~~~~a~~ 452 (478)
T PRK11459 373 AKAQSNLSIASYNKAVVDAVNDVARAASQVETLAEKNQHQQQIERDALRVVGLAQARFNAGIIAGSRVSEAKIPALRERA 452 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999997533579999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999
Q gi|254780930|r 420 ATAKVEVDLSIAKRQLAKS 438 (452)
Q Consensus 420 ~~~~a~~~~~~a~~~~~~a 438 (452)
T Consensus 453 ~l~~~~~~~l~~~v~Ly~A 471 (478)
T PRK11459 453 NGLLLQGQWLDASIQLTGA 471 (478)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999997