HHsearch alignment for GI: 254780930 and conserved domain: TIGR01844

>TIGR01844 type_I_sec_TolC type I secretion outer membrane protein, TolC family; InterPro: IPR010130 Members of group of are outer membrane proteins from the TolC family within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT family, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (Escherichia coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa).; GO: 0015031 protein transport, 0019867 outer membrane.
Probab=100.00  E-value=0  Score=373.26  Aligned_cols=387  Identities=17%  Similarity=0.238  Sum_probs=337.4

Q ss_pred             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC---------------CCCCCCCCCCC
Q ss_conf             799999999970899899999999999999987542053011101124566555---------------44444321110
Q gi|254780930|r   60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---------------TNSTGQLDSDW  124 (452)
Q Consensus        60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~---------------~~~~~~~~~s~  124 (452)
T Consensus         4 ~L~~a~~~A~~~NP~l~~a~~~~~a~~e~~~~AraallP~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~Q   83 (437)
T TIGR01844         4 TLLDAVELALANNPELRAARAQRDAGEEKVAQARAALLPQLGLTANIGYSNTNVTETRRRADGKIKRDLNSRSSTLTLSQ   83 (437)
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEE
T ss_conf             78899999974396589999875777643444311687435533316643454554421057655540046158888764


Q ss_pred             CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             11001234-57788887776555679999999999999876666777889999999999999999878765543234567
Q gi|254780930|r  125 KIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL  203 (452)
Q Consensus       125 ~ldl~G~~-~~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~  203 (452)
T Consensus        84 ~lfdG~~~~~~~~~~~~~~~~~~~~l~~~~q~~~~~~~~aY~~v~~~q~~l~l~~~n~~a~~~ql~~~~~R~~~G~~~~t  163 (437)
T TIGR01844        84 PLFDGGSTFNDVRAAEAAALAARENLRATAQDLILRVAEAYVEVLRAQEILALAEANLAALKEQLDLARARFDVGEGTRT  163 (437)
T ss_pred             EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             01646999999999889999999999988879999999999999999999999999999999999999999854687503


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             7765322235579899999985688887687763999--21300012345544331001221048878997302345565
Q gi|254780930|r  204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ  281 (452)
Q Consensus       204 d~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a  281 (452)
T Consensus       164 DV~q~eAR~~~A~a~l~~a~~~l~~a~~~l~~l~G~pL~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~A~~~~P~llaa  242 (437)
T TIGR01844       164 DVLQAEARYASARAQLIQAQANLDDAKAQLRRLVGQPLEISELAPLAVPSLPAELPAPTSDLD-QLLEIAEASNPALLAA  242 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHH-HHHHHHHHHHHHHHHH
T ss_conf             689999999999999999999899999999996589988357653676672010342248989-9999999854899999


Q ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC-------------CCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             5589999643010112222100112222112234454-------------454104431122345101245665677999
Q gi|254780930|r  282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-------------GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE  348 (452)
Q Consensus       282 ~~~~~~a~~~i~~a~a~~~P~i~l~~~~~~~~~~~~~-------------~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~  348 (452)
T Consensus       243 ~~~~~~A~~~~~~~~A~~~PTl~l~As~~~~~~~~~~~~~~g~~~~~~~D~~~~~~s~~l~~~~PlY~GG~~~a~~rqA~  322 (437)
T TIGR01844       243 QAAVNAARYEVEQARAGHLPTLSLTASTGKSDTASGGSGNSGAATTQQYDDYSDTDSIGLNVSIPLYQGGATSAQVRQAK  322 (437)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHH
T ss_conf             99999999999986167874132001024125543433121234433356401000356777520223766189999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999999999998718832899999999999999999
Q gi|254780930|r  349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL  428 (452)
Q Consensus       349 ~~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~  428 (452)
T Consensus       323 ~~~~~s~~~~e~~~r~v~~~~~~a~~~~~~~~~~~~a~~~~v~sa~~~~~~~~~~~~vG~Rt~LDvLna~~eLy~A~~~l  402 (437)
T TIGR01844       323 HQLNQSRSTLESQKRTVRQQVRNAWSQLEAAAASVQAYEDQVASAQKALDAYRQEYQVGTRTLLDVLNAENELYQARQAL  402 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999998789999999999999998779999999999999999999999988347531004475589999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999849
Q gi|254780930|r  429 SIAKRQLAKSYVDLYIAIG  447 (452)
Q Consensus       429 ~~a~~~~~~a~~~L~~AlG  447 (452)
T Consensus       403 ~~ary~~~~a~~~l~~A~G  421 (437)
T TIGR01844       403 VQARYDYLLAQLRLLSATG  421 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHC
T ss_conf             8668999999999998716