HHsearch alignment for GI: 254780930 and conserved domain: pfam02321
>pfam02321 OEP Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.
Probab=99.93 E-value=1.7e-23 Score=171.38 Aligned_cols=179 Identities=26% Similarity=0.364 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC--CCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 8997302345565558999964301011222210011222211223445--44541044311223451012456656779
Q gi|254780930|r 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 (452)
Q Consensus 269 ~~~l~~RPdi~~a~~~~~~a~~~i~~a~a~~~P~i~l~~~~~~~~~~~~--~~~~~~~~~g~~l~~Pif~gg~~~a~i~~ 346 (452)
T Consensus 6 ~~Al~nnp~l~~a~~~~~~a~~~~~~a~~~~~P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~g~~~~~~~~ 85 (186)
T pfam02321 6 ALALENNPDLKAAEAEIEAARANIKLAKSEFLPDLSLSGGYGYNGNNSNGGGDDPRNGSVGLGLSQPLFDGGKRRARVKA 85 (186)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH
T ss_conf 99998099999999999999999999861438865678631014566666667776504788998760343243379999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999987188328999999999999999
Q gi|254780930|r 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 (452)
Q Consensus 347 a~~~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~ 426 (452)
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~G~~~~~dl~~a~~~~~~a~~ 165 (186)
T pfam02321 86 AKAQLEAAEAQLEQARRQLRLEVAQAYLNLLAAKEQLELAKQALELAEEALELAEARYEAGLISLLDVLQAEVELLEARL 165 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999998679999999999999999999999999999999999999999999997699758899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999999849
Q gi|254780930|r 427 DLSIAKRQLAKSYVDLYIAIG 447 (452)
Q Consensus 427 ~~~~a~~~~~~a~~~L~~AlG 447 (452)
T Consensus 166 ~~~~a~~~~~~a~~~L~~~~G 186 (186)
T pfam02321 166 ELLEAEADLELARAQLEYLLG 186 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999998549