HHsearch alignment for GI: 254780930 and conserved domain: pfam02321
>pfam02321 OEP Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.
Probab=99.89 E-value=6.8e-21 Score=154.35 Aligned_cols=178 Identities=24% Similarity=0.352 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC-------CCCCCCCCCCCCCHHHHHH
Q ss_conf 999999999708998999999999999999875420530111011245665554-------4444321110110012345
Q gi|254780930|r 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-------NSTGQLDSDWKIDLFGQRR 133 (452)
Q Consensus 61 L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~~-------~~~~~~~~s~~ldl~G~~~ 133 (452)
T Consensus 1 l~~~i~~Al~nnp~l~~a~~~~~~a~~~~~~a~~~~~P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~g~~~ 80 (186)
T pfam02321 1 LDELLALALENNPDLKAAEAEIEAARANIKLAKSEFLPDLSLSGGYGYNGNNSNGGGDDPRNGSVGLGLSQPLFDGGKRR 80 (186)
T ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHH
T ss_conf 98999999980999999999999999999998614388656786310145666666677765047889987603432433
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -7788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r 134 -HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 (452)
Q Consensus 134 -~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~ 212 (452)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~G~~~~~dl~~a~~~~ 160 (186)
T pfam02321 81 ARVKAAKAQLEAAEAQLEQARRQLRLEVAQAYLNLLAAKEQLELAKQALELAEEALELAEARYEAGLISLLDVLQAEVEL 160 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 79999999999999986799999999999999999999999999999999999999999999976997588999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 55798999999856888876877639
Q gi|254780930|r 213 KSIESDIPTLEKSFRMNVHNISTLLG 238 (452)
Q Consensus 213 ~~~~~~l~~~~~~~~~a~~~L~~l~G 238 (452)
T Consensus 161 ~~a~~~~~~a~~~~~~a~~~L~~~~G 186 (186)
T pfam02321 161 LEARLELLEAEADLELARAQLEYLLG 186 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999998549