HHsearch alignment of GI: 254780930 and MMDB domain: 1yc9_A_1-69_115-283
>1yc9_A (A:1-69,A:115-283) VCEC, multidrug resistance protein; outer membrane protein; HET: BOG; 1.80A {Vibrio cholerae}
Probab=99.97 E-value=2.1e-28 Score=202.94 Aligned_cols=219 Identities=19% Similarity=0.339 Sum_probs=193.8
Q ss_pred CCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67686234366099879999999997089989999999999999998754205301110112456655544444321110
Q gi|254780930|r 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDW 124 (452)
Q Consensus 45 ~~~~~~~ww~~~~d~~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~s~ 124 (452)
..++..+||+.|+||.|+.+|+.|+.+||+|.+|..+++.|++....+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 68 (238)
T 1yc9_A 19 MDWPSANWWQRYQDAQLNHLIEEALQHSPSLCMAMARLKGAQGFARQAGA------------------------------ 68 (238)
T ss_dssp --CCCTTGGGGGCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHG------------------------------
T ss_pred CCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC------------------------------
T ss_conf 79981679876698889999999996399999999999999999999647------------------------------
Q ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 110012345-7788887776555679999999999999876666777889999999999999999878765543234567
Q gi|254780930|r 125 KIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 (452)
Q Consensus 125 ~ldl~G~~~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~ 203 (452)
.||+++ .++.+....+.++.+++.++.++..+|.++|++++..++.+++.++.++..++.++.++.+++.|.++..
T Consensus 69 ---~~Gk~~a~~~~A~~~~~~a~~~~~~~~~~l~~~v~~aY~~ll~~q~~l~i~~~~l~~~~~~~~~~~~r~~~G~~s~~ 145 (238)
T 1yc9_A 69 ---IWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLG 145 (238)
T ss_dssp ---GTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHH
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---47777788999999999999999999999999999999999999888999999999999999999988642101233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 77653222355798999999856888876877639992130001234554433100122104887899730234556555
Q gi|254780930|r 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 (452)
Q Consensus 204 d~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~ 283 (452)
|+.+++.++..++..+..++.++..++..|..++|.++.............+.+ .+....++..++.+||||+.++.
T Consensus 146 Dl~~aq~~l~~a~~~l~~ae~~~~~a~~~L~~LlG~~~~~~~~l~~~~~~~~~~---~~~~~~l~~~al~~rPdl~~a~~ 222 (238)
T 1yc9_A 146 SVSQAKAVAASVEAELLGIQESIQLQKNALAALVGQGPDRAASIEEPHITLTSR---YGLPSEAGVGLLGHRADITAARW 222 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCCCCCCCCCCC---C-------CGGGTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHCCHHHHHHH
T ss_conf 556554444346668999999999999889998477874112345543222344---46806667778862100224677
Q ss_pred HHHHHHHHHCCHHHHH
Q ss_conf 8999964301011222
Q gi|254780930|r 284 KLADSVAKIGIAKSDL 299 (452)
Q Consensus 284 ~~~~a~~~i~~a~a~~ 299 (452)
++++++.+++.++++|
T Consensus 223 ~i~aa~~~i~~aka~y 238 (238)
T 1yc9_A 223 RAEAAAQQVGIAQAQF 238 (238)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 8999998676777631