HHsearch alignment of GI: 254780930 and MMDB domain: 1yc9_A_70-114_284-322
>1yc9_A (A:70-114,A:284-322) VCEC, multidrug resistance protein; outer membrane protein; HET: BOG; 1.80A {Vibrio cholerae}
Probab=97.25 E-value=0.0001 Score=48.22 Aligned_cols=39 Identities=36% Similarity=0.708 Sum_probs=34.3
Q ss_pred HHHHHHCCCCCCCCCCC---CCCCCCCCCEEEEECCCCCCCC
Q ss_conf 22221001122221122---3445445410443112234510
Q gi|254780930|r 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIF 335 (452)
Q Consensus 297 a~~~P~i~l~~~~~~~~---~~~~~~~~~~~~~g~~l~~Pif 335 (452)
-++||+|+|+|++|+.+ .+++...+..|++|++++||||
T Consensus 43 ~~~YPsISLTGslGfeS~~ls~LFss~S~~WSIGPSLSlPIF 84 (84)
T 1yc9_A 43 FDFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLF 84 (84)
T ss_dssp CCTSCEEEEEEEEEEEEESGGGTTSTTCEEEEEEEEEECCCC
T ss_pred HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 237134210110365554422224565321002431122211