HHsearch results for GI: 254780930 and protein with PDBid: 1ek9_A
>1ek9_A Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli} SCOP: f.5.1.1 PDB: 1tqq_A 2vde_A 2vdd_A
Probab=100.00 E-value=0 Score=356.43 Aligned_cols=385 Identities=14% Similarity=0.168 Sum_probs=340.5
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC-------CCCCCCCCCCCCCCCHHHHH
Q ss_conf 79999999997089989999999999999998754205301110112456655-------54444432111011001234
Q gi|254780930|r 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-------KTNSTGQLDSDWKIDLFGQR 132 (452)
Q Consensus 60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~-------~~~~~~~~~~s~~ldl~G~~ 132 (452)
.|.++++.|++|||+|+.++.+++++++.+..+++.++|++++++++++.... ...++.+++++|+|..||+.
T Consensus 2 ~L~~~~~~Al~nnp~l~~a~~~~~~a~~~~~~a~~~~~P~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~q~l~~~g~~ 81 (428)
T 1ek9_A 2 NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKW 81 (428)
T ss_dssp CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGSCEEEEEEEEEEEEECSSSTTCEEEEEEEEEEEEEEEECHHHH
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCHHH
T ss_conf 88999999997199999999999999999999734648836899766533577777777766425889999885356346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 (452)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~ 212 (452)
+.++.+....+.+...+..++.+++.+|..+||+++.+++.+++.++.++..++.++.++.+++.|.++..|+.+++.++
T Consensus 82 ~~~~~a~~~~~~a~~~~~~~~~~~~~~v~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~d~~~~~~~~ 161 (428)
T 1ek9_A 82 RALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQY 161 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999998889999998999999999999999975887611477787766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55798999999856888876877639992130001234554433100122104887899730234556555899996430
Q gi|254780930|r 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 (452)
Q Consensus 213 ~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~~~~~a~~~i 292 (452)
..++..+..++.++..++..|..++|.++...............+.... .+...++.+|||++.++..++.+..++
T Consensus 162 ~~~~~~l~~~~~~~~~~~~~L~~l~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~a~~~~p~l~~~~~~~~~~~~~~ 237 (428)
T 1ek9_A 162 DTVLANELTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVN----ALLKEAEKRNLSLLQARLSQDLAREQI 237 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSEEEEECTTTCCCCCCCCHH----HHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7789889999988999999999883898411112354445667863036----788999874055554279999999999
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCC-------------CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 101122221001122221122344-------------5445410443112234510124566567799999999999999
Q gi|254780930|r 293 GIAKSDLYPSLSLNGSIALTHDNS-------------FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 (452)
Q Consensus 293 ~~a~a~~~P~i~l~~~~~~~~~~~-------------~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~~~~a~~~~~ 359 (452)
+.+++.++|+|++++++++...+. .......|++|++++||||+||+.+++++.++...+.+..+++
T Consensus 238 ~~~~~~~~P~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~plf~g~~~~~~~~~a~~~~~~~~~~~~ 317 (428)
T 1ek9_A 238 RQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLE 317 (428)
T ss_dssp HHHHGGGSCEEEEEEEEEEECCEEESTTSSSSCCSTTSCCCCEEEEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998149966899864134555444445555664434445544279999987413206677788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999871883289999999999999999999999999999
Q gi|254780930|r 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 (452)
Q Consensus 360 ~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~ 439 (452)
+....+..++++++..+....+++..+++.+..+++.++.++.+|+.|..+++||+++++++++++.+++++++++..+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~s~~dll~a~~~~~~a~~~~~~a~~~~~~a~ 397 (428)
T 1ek9_A 318 SAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQ 397 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999986997199999999999999999999999999999
Q ss_pred HHHHHHHCC
Q ss_conf 999998499
Q gi|254780930|r 440 VDLYIAIGS 448 (452)
Q Consensus 440 ~~L~~AlGG 448 (452)
++|++++|.
T Consensus 398 ~~l~~~~G~ 406 (428)
T 1ek9_A 398 LNIKSALGT 406 (428)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHCC
T ss_conf 999998689