HHsearch results for GI: 254780930 and protein with PDBid: 1ek9_A

>1ek9_A Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli} SCOP: f.5.1.1 PDB: 1tqq_A 2vde_A 2vdd_A
Probab=99.83  E-value=4.9e-18  Score=134.23  Aligned_cols=180  Identities=17%  Similarity=0.199  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC------------------CCCCCCCCCCC
Q ss_conf             999999999708998999999999999999875420530111011245665------------------55444443211
Q gi|254780930|r   61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN------------------LKTNSTGQLDS  122 (452)
Q Consensus        61 L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~------------------~~~~~~~~~~~  122 (452)
                      +..++..++.+||+++.+...++.++..++.+++.++|++++.+++++...                  .....+.++++
T Consensus       209 ~~~~~~~a~~~~p~l~~~~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~  288 (428)
T 1ek9_A          209 VNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSF  288 (428)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGSCEEEEEEEEEEECCEEESTTSSSSCCSTTSCCCCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             36788999874055554279999999999999981499668998641345554444455556644344455442799999


Q ss_pred             CCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             10110012345-77888877765556799999999999998766667778899999999999999998787655432345
Q gi|254780930|r  123 DWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS  201 (452)
Q Consensus       123 s~~ldl~G~~~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~  201 (452)
                      +|+|..+|+.+ .++.++.....++.+++..+.++..++..+|..+..+.+.+++.++.++..++.++..+.+|+.|..+
T Consensus       289 ~~plf~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~s  368 (428)
T 1ek9_A          289 SLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRT  368 (428)
T ss_dssp             EEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             87413206677788899999999999999999999999999999999999999999999999999999999999869971


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             677765322235579899999985688887687763999
Q gi|254780930|r  202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP  240 (452)
Q Consensus       202 ~~d~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~~  240 (452)
                      ..|++.++..+.+++.++.+++.++..+...|..++|.-
T Consensus       369 ~~dll~a~~~~~~a~~~~~~a~~~~~~a~~~l~~~~G~L  407 (428)
T 1ek9_A          369 IVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTL  407 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999999999999999999999999999986899