HHSEARCH alignment of GI: 254780930 and SCOP domain: d1wp1a_

Alignment
>d1wp1a_ f.5.1.1 (A:) Outer membrane protein OprM {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.77  E-value=5.3e-16  Score=119.37  Aligned_cols=117  Identities=18%  Similarity=0.181  Sum_probs=47.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             45101245665677999999999999999999999999999999999999999999999999999999999987188328
Q gi|254780930|r  332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL  411 (452)
Q Consensus       332 ~Pif~gg~~~a~i~~a~~~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~  411 (452)
                      |++|.+|++...++.++...+.+...++.+..+...+|..+|.++..+.+.+...++.++.+++.++.++.+|+.|.++.
T Consensus       124 ~~l~~~g~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~~G~~~~  203 (456)
T d1wp1a_         124 WELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASA  203 (456)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             23343356777888888888888999999999999999999999999877789999999999999999988863785201


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999999999999999999999999998499
Q gi|254780930|r  412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS  448 (452)
Q Consensus       412 ~dll~a~~~~~~a~~~~~~a~~~~~~a~~~L~~AlGG  448 (452)
                      .|++.++..+.+++..+..++.++..+...|..-+|.
T Consensus       204 ~d~~~a~~~l~~~~~~l~~~~~~~~~a~~~L~~llg~  240 (456)
T d1wp1a_         204 LDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGS  240 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             0004788999999889999999999999999998289


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Outer membrane efflux proteins (OEP)
superfamily: Outer membrane efflux proteins (OEP)
family: Outer membrane efflux proteins (OEP)
domain: Outer membrane protein OprM
species: Pseudomonas aeruginosa [TaxId: 287]