BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780930|ref|YP_003065343.1| nodulation protein (outer membrane efflux protein) [Candidatus Liberibacter asiaticus str. psy62] (452 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780930|ref|YP_003065343.1| nodulation protein (outer membrane efflux protein) [Candidatus Liberibacter asiaticus str. psy62] gi|254040607|gb|ACT57403.1| nodulation protein (outer membrane efflux protein) [Candidatus Liberibacter asiaticus str. psy62] Length = 452 Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/452 (100%), Positives = 452/452 (100%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS Sbjct: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL Sbjct: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI Sbjct: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP Sbjct: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY Sbjct: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE Sbjct: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA Sbjct: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP Sbjct: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 >gi|315122644|ref|YP_004063133.1| nodulation protein (outer membrane efflux protein) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496046|gb|ADR52645.1| nodulation protein (outer membrane efflux protein) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 452 Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/452 (74%), Positives = 398/452 (88%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MNIL+ FS+ +VLLAGC VGPEYTKP MP LPTQFSIG S + IN+DTLKWWESFNDT Sbjct: 1 MNILKINFSILVVLLAGCAVGPEYTKPQMPRLPTQFSIGKSNSPINVDTLKWWESFNDTC 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LNKLV IALQQNLTIL+ATERIN+AKENIL+V+ADLFPS S+S++ +P TNSTG++ Sbjct: 61 LNKLVNIALQQNLTILKATERINSAKENILAVKADLFPSLQTSVSYQIMPKSDTNSTGRV 120 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 SDWKIDLFGQ+R +ES+LAN DS YAQ +IAKL +I+KLI +YIDARHF+ERISIAH+I Sbjct: 121 HSDWKIDLFGQKRRMESALANFDSVYAQSEIAKLTIIAKLISTYIDARHFQERISIAHKI 180 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 LDLYK+N++L+ LK +GA SKL L+KLEAE+KSIES+IP LEK FR+NVHNISTLLG+ Sbjct: 181 LDLYKRNLKLTRLKLFEGAISKLPLIKLEAELKSIESEIPNLEKGFRVNVHNISTLLGHS 240 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 AT+FL Y+QKQ FQPNLY+ INIGIPADLIRNRPDIRY+EK +ADS+AKIGIAK+DLY Sbjct: 241 ATDFLAYIQKQKKPFQPNLYMKINIGIPADLIRNRPDIRYREKNIADSIAKIGIAKADLY 300 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 P++SLNG I+LTHDN PGY++ WSFGPKLY+PIFD KI+SNIRRAES A EQYI WQE Sbjct: 301 PAISLNGFISLTHDNISPGYHSGWSFGPKLYVPIFDGQKIRSNIRRAESFAHEQYIAWQE 360 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVLNA+KEVE+AL SIN+DKK+VT LQ+ VEL+K++MSLS I+YRQG+YSL+D+LDIE+ Sbjct: 361 TVLNAVKEVEDALISINQDKKVVTALQNTVELYKQAMSLSTISYRQGKYSLIDLLDIEKT 420 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 TAK EVDLSIAKRQLAKSYVDLY+AIGSGYNP Sbjct: 421 TAKAEVDLSIAKRQLAKSYVDLYVAIGSGYNP 452 >gi|86359005|ref|YP_470897.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli CFN 42] gi|86283107|gb|ABC92170.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli CFN 42] Length = 478 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/464 (41%), Positives = 289/464 (62%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K++ ++ T WW +FND Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHAPPEMPL-PAKFGEGGTKSVGDVATAAWWTAFNDPK 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 LN V+ L QNL++ QA ERINAA N+ + A P+ SH R + Sbjct: 60 LNGYVQAGLDQNLSVQQAIERINAASANVTTAGAGGLPNLTVGGSHTVSGQRGELRTQFD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + G + W +DLFG +R ES+LA+LDSAYA D+AKL ++ L+ SYID R++ Sbjct: 120 TRNTTAGDVQLSWLLDLFGLYKRSTESALASLDSAYASADVAKLTLVQDLVSSYIDVRYY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRVSA 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA+ + + K QP IN GIPADLIRNRPDIR E+ LA + A Sbjct: 240 HHIATLLGLPASALVDELLK--GRGQPVFRGGINSGIPADLIRNRPDIRVAERDLAAATA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ LYPS+SL+GSI+ ++ N G T WSFGP L LPIFD G++++N++ A+ Sbjct: 298 NIGVAEAQLYPSISLSGSISPSYINQRGIHGDLTPWSFGPTLNLPIFDGGRLRANVKSAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S+A Y+ W+ TVL A+++VENAL ++ D + V LQ V+ ++++ LS +Y+ G Sbjct: 358 STAATAYLNWKSTVLTAVEQVENALAAVRRDARTVAALQAQVKTTQETLELSTASYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ A +Q+AK YV L IA+G GY P Sbjct: 418 SSLLDVLDAQRQVSLAQASLAQAVQQMAKDYVSLNIAVGGGYAP 461 >gi|209550733|ref|YP_002282650.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536489|gb|ACI56424.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 480 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/449 (41%), Positives = 284/449 (63%), Gaps = 15/449 (3%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC VGP++ P MPL P +F G +K++ ++ T WW +FND LN VK L QNLT+ Sbjct: 17 SGCVVGPDHVPPEMPL-PAKFGEGGTKSVGDVATAAWWTAFNDPKLNGYVKAGLDQNLTV 75 Query: 76 LQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKI 126 QA ERINAA N+ + A P+ SH R + + S G++ W + Sbjct: 76 QQAIERINAASANVTTAGAGALPNLTVGGSHTVSGQRGELRTQFDTRNTSAGEVQLSWLL 135 Query: 127 DLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG +R ES+LA+LDSAYA D+AKL ++ L+ SYID R++++R++++ L + Sbjct: 136 DLFGLYKRSTESALASLDSAYASADVAKLTLVQDLVSSYIDVRYYQQRLALSRANLKSRQ 195 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + EL+ + GA S+L +V+ E ++S ++IP LE + R++ H+I+TLLG PA+ + Sbjct: 196 ETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRISAHHIATLLGLPASALV 255 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + K + QP IN GIPADLIRNRPD+R E+ LA + A IG+A++ LYPS+SL Sbjct: 256 DELLK--GHGQPVFRGGINSGIPADLIRNRPDVRVAERDLAAATANIGVAQAQLYPSISL 313 Query: 306 NGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 +GSI+ ++ N G T WSFGP L LPIFD G++++N++ A+S A Y+ W+ TVL Sbjct: 314 SGSISPSYINQRGIHGGLTPWSFGPTLNLPIFDGGRLRANVKSAQSDAATAYLNWKSTVL 373 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 ++++VENAL ++ D + V+ LQ V+ ++++ LS +Y+ G SLLD+LD +R + Sbjct: 374 TSVEQVENALAAVRRDARTVSALQAQVKTTQETLELSTASYKDGASSLLDVLDAQRQVSL 433 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ A +Q+AK YV L IA+G GY P Sbjct: 434 AQASLAQAVQQMAKDYVSLNIAVGGGYAP 462 >gi|190893232|ref|YP_001979774.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli CIAT 652] gi|190698511|gb|ACE92596.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli CIAT 652] Length = 478 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/464 (40%), Positives = 287/464 (61%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K++ ++ T WW +F D Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHAPPEMPL-PAKFGEGGTKSVGDVATAAWWTAFKDPR 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 LN V+ L+QNLT+ QA ERINAA N+ A PS SH R + Sbjct: 60 LNGYVQAGLEQNLTVQQAIERINAASANVTIAGAGALPSLNVGASHTVSGQKGELRTQFD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + S G + W +DLFG +R ES+ A+LDSAYA D+AKL ++ L+ SYID R + Sbjct: 120 TRNTSAGDVQLSWLLDLFGLYKRSTESAAASLDSAYASADVAKLTLVQDLVSSYIDVRFY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRISA 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA+ ++ + + QP + IN GIPADLIRNRPDIR E+ LA + A Sbjct: 240 HHIATLLGLPASALVNELLR--GGGQPVFHGGINSGIPADLIRNRPDIRVAERDLAAATA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ LYPS+SL+GSI+ ++ N G T WSFGP L LPIFD G++++N++ A+ Sbjct: 298 NIGVAEAQLYPSISLSGSISPSYINQRGVHGGLTPWSFGPTLNLPIFDGGRLRANVKSAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S A Y+ W+ TVL A+++VENAL ++ D + V LQ V+ ++++ LS +Y+ G Sbjct: 358 SDAATAYLNWKSTVLTAVEQVENALAAVRRDAQTVAALQAQVKTTQETLELSTASYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ + +Q+AK YV L IA+G GY P Sbjct: 418 SSLLDVLDAQRQVSLAQASLAQSVQQMAKDYVSLNIAVGGGYAP 461 >gi|58294348|gb|AAW70092.1| NodTch [Rhizobium etli] Length = 479 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/465 (41%), Positives = 290/465 (62%), Gaps = 16/465 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K++ ++ T WW +FND Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHAPPEMPL-PAKFGEGGTKSVGDVATAAWWTAFNDPK 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISH---------RFIP 110 LN V+ L QNL++ QA ERINAA N+ + A P+ + SH R Sbjct: 60 LNGYVQAGLDQNLSVQQAIERINAASANVTTAGAGPLPNLTVGGGSHMVSGQRGELRTQF 119 Query: 111 NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + + G + W +DLFG +R ES+LA+LDSAYA D+AKL ++ L+ SYID R+ Sbjct: 120 DTRNTTAGDVQLSWLLDLFGLYKRTTESALASLDSAYASADVAKLTLVQDLVSSYIDVRY 179 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 YQQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRVS 239 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H+I+TLLG PA+ + + K QP IN GIPADLIRNRPDIR E+ LA + Sbjct: 240 AHHIATLLGLPASALVDELLK--GRGQPVFRGGINSGIPADLIRNRPDIRVAERDLAAAT 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A IG+A++ LYPS+SL+GSI+ ++ N G T WSFGP L LPIFD G++++N++ A Sbjct: 298 ANIGVAEAQLYPSISLSGSISPSYINQRGIHGDLTPWSFGPTLNLPIFDGGRLRANVKSA 357 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +S+A Y+ W+ TVL A+++VENAL ++ D + V LQ V+ ++++ LS +Y+ G Sbjct: 358 QSTAATAYLNWKSTVLTAVEQVENALAAVRRDARTVAALQAQVKTTQETLELSTASYKDG 417 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ A +Q+AK YV L IA+G GY P Sbjct: 418 ASSLLDVLDAQRQVSLAQASLAQAVQQMAKDYVSLNIAVGGGYAP 462 >gi|327188981|gb|EGE56170.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli CNPAF512] Length = 478 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/464 (40%), Positives = 287/464 (61%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K++ ++ T WW +F D Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHAPPEMPL-PAKFGEGGTKSVGDVATAAWWTAFKDPR 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 LN V+ L+QNLT+ QA ERINAA N+ A PS SH R + Sbjct: 60 LNGYVQAGLEQNLTVQQAIERINAASANVTIAGAGGLPSLNVGASHTVSGQKGELRTQFD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + S G + W +DLFG +R ES+ A+LDSAYA D+AKL ++ L+ SYID R + Sbjct: 120 TRNTSAGDVQLSWLLDLFGLYKRSTESAAASLDSAYASADVAKLTLVQDLVSSYIDVRFY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRISA 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA+ ++ + + QP + IN GIPADLIRNRPDIR E+ LA + A Sbjct: 240 HHIATLLGLPASALVNELLR--GGGQPVFHGGINSGIPADLIRNRPDIRVAERDLAAATA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ LYPS+SL+GSI+ ++ N G T WSFGP L LPIFD G++++N++ A+ Sbjct: 298 NIGVAEAQLYPSISLSGSISPSYINQRGVHGGLTPWSFGPTLNLPIFDGGRLRANVKSAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S A Y+ W+ TVL A+++VENAL ++ D + V LQ V+ ++++ LS +Y+ G Sbjct: 358 SDAATAYLNWKSTVLTAVEQVENALAAVRRDAQTVAALQAQVKTTQETLELSTASYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ + +Q+AK YV L IA+G GY P Sbjct: 418 SSLLDVLDAQRQVSLAQASLAQSVQQMAKDYVSLNIAVGGGYAP 461 >gi|325293923|ref|YP_004279787.1| nodulation protein T precursor [Agrobacterium sp. H13-3] gi|325061776|gb|ADY65467.1| nodulation protein T precursor [Agrobacterium sp. H13-3] Length = 480 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/460 (41%), Positives = 285/460 (61%), Gaps = 17/460 (3%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +RA L ++LL+GC VGP++ P + L P +F+ + +I ++ WW +FND LN Sbjct: 4 IRATIPLTMLLLSGCVVGPDHKTPEIQL-PGKFAEAGKTSNGDISSVAWWTAFNDNRLNG 62 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKT 114 V L QNLT++QA ERIN A+ ++ A PS S SH R +P + Sbjct: 63 YVSTGLAQNLTVMQAIERINQAQAQVIVDGAGGLPSLTGSGSHTTSETKGSYRDVP-VTN 121 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S G L W +DLFG+ RR ES+ A+LD+AY+ VD+ +L +IS + +YID R+++ER Sbjct: 122 VSNGSLSVSWFLDLFGRYRRATESADASLDAAYSTVDVQRLTLISSVAAAYIDVRYYQER 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++IA Q L ++ ++L+ L+ GA S+L +V+ E + S S IP LE SFR + H I Sbjct: 182 LAIARQNLSSRRETLDLTKLQLEAGAASRLDVVQSEGLVNSTLSQIPGLETSFRKSAHRI 241 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG PA+ + +QK + QP GIPADLIRNRPDIR E+ LA +VA IG Sbjct: 242 ATLLGMPASSLIAELQKGAR--QPVARAVPRTGIPADLIRNRPDIRVAERNLAAAVATIG 299 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 + ++ LYPS+ L G+I +++ G WSFGP L LPI D G++++N+ A S Sbjct: 300 VTEAQLYPSIELGGAITPSYNFLSGGGRGTANSWSFGPSLTLPILDGGRLRANVDIANSQ 359 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+EQY+ W+ TVLNA++EVENAL +IN D++ V L+ V +++++ LS +YR G S Sbjct: 360 AREQYLVWKATVLNAVEEVENALAAINRDQRTVDALRKTVSSYQEALQLSTASYRDGASS 419 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LLD+LD +R+ + + +L+ A + A+ YV L +A+G GY Sbjct: 420 LLDVLDAQRSVSDAQANLATAIQTTAQDYVSLNVALGGGY 459 >gi|159185264|ref|NP_355492.2| nodulation protein T precursor [Agrobacterium tumefaciens str. C58] gi|9957271|gb|AAG09298.1|AF177860_1 NodT homolog [Agrobacterium tumefaciens] gi|9963889|gb|AAG09747.1|AF232237_5 outer membrane protein [Agrobacterium tumefaciens] gi|159140524|gb|AAK88277.2| nodulation protein T precursor [Agrobacterium tumefaciens str. C58] Length = 484 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 185/461 (40%), Positives = 286/461 (62%), Gaps = 17/461 (3%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +RA L ++LL+GC VGP++ P + L P +F+ + +I T+ WW +FND+ LN Sbjct: 4 IRATLPLTMLLLSGCVVGPDHQTPEIQL-PGKFAEAGKTSNGDISTVAWWNAFNDSRLNG 62 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF------IP----NLK 113 V L QNLT+LQA ERIN A+ NI A PS ++ H+ +P N+ Sbjct: 63 YVSTGLTQNLTVLQAIERINQAQSNITVAGAGSLPSLTSTFRHQTQGSGGSLPSTNDNVT 122 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 ++ + W +DLFGQ RR ES+ A+LD+AYA ++ +L +IS + +YID R+++E Sbjct: 123 NTTSNAFNVGWLLDLFGQYRRAQESAGASLDAAYATANVQRLTLISAVTSAYIDVRYYQE 182 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R++IA Q L ++ + L+ L+ GA S+L +V+ E + S + +P LE +FR H Sbjct: 183 RLAIARQNLGSRRETLSLTKLQLDAGAASRLDVVQSEGLVNSTLAQMPALETNFRRAAHR 242 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TLLG PA + +Q+ + QP GIPADLIRNRPDIR E++LA +VA I Sbjct: 243 IATLLGMPADSLVMELQRGAR--QPVARTIPRTGIPADLIRNRPDIRVAERQLAAAVADI 300 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A++ LYPS++L+GSI + N G + W FGP + LPI D G++++ + +S Sbjct: 301 GVAEAQLYPSITLSGSITPSFTKISNGASGTSNGWGFGPSITLPILDGGRLRAGVDIQKS 360 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A+EQY+ W+ TVLNA++EVENALT++N D++ V+ + V +++++SL+ +YR G Sbjct: 361 VAREQYLAWKATVLNAVEEVENALTALNRDQQTVSAYRRTVSSYQEALSLATASYRDGAS 420 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SLLD+LD +R + + L+ A +Q A+ YV L +A+G GY Sbjct: 421 SLLDVLDAQRNVSDAQSQLATAIQQAAQDYVALSVALGGGY 461 >gi|116254733|ref|YP_770569.1| nodulation protein NodT [Rhizobium leguminosarum bv. viciae 3841] gi|115259381|emb|CAK10516.1| putative outer membrane protein, similar to nodulation protein NodT [Rhizobium leguminosarum bv. viciae 3841] Length = 484 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 190/460 (41%), Positives = 286/460 (62%), Gaps = 16/460 (3%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LR S +LLAGC GP++ P MPL P +F G SK+ ++ +WW ++ D L+ Sbjct: 12 LRYAASAITLLLAGCVSGPDHAPPQMPL-PAKFQEGGSKSNGDVVAAQWWTAYRDKQLDG 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKT 114 LV L +NL +LQA ERIN+A N+ A PS SH R K Sbjct: 71 LVAHGLSENLDVLQALERINSASANVTVAGAGGLPSLDVGASHTVYGEKGSQRTTIGTKN 130 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + G+ W +D FGQ RR ES++A+L +AYA D AKL + L+ SY+DAR++++R Sbjct: 131 TTGGEASLSWLLDFFGQYRRSKESAIASLGAAYATADDAKLTFLKDLVSSYVDARYYQQR 190 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I+++ L ++ EL+ L+ GA S+L +V+ E ++S ++DIP LE+SF ++ H+I Sbjct: 191 IALSQANLKSRQETYELTQLQLKAGAASRLDVVQAEGLVQSTKADIPGLEQSFTVSAHHI 250 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG PA ++ +Q+ + QP I GIPADLIRNRPDIR E+ LA +VA IG Sbjct: 251 ALLLGMPAASLMNELQRSTG--QPVFRGDIRAGIPADLIRNRPDIRKAERDLAAAVADIG 308 Query: 294 IAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ LYPS+SL+GSI+ + + G T WSFGP L LPIFD GK+++N+ +S Sbjct: 309 AAEAQLYPSISLSGSISPSWVKSSGASGGTMTSWSFGPTLNLPIFDGGKLRANVDIEKSD 368 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ QY+ W+E VLN ++EVENAL+++ D + + L+ V+ ++S++LS +Y+ G S Sbjct: 369 AKAQYLAWKEAVLNGVEEVENALSAVRRDTQTLAPLRRQVQTAEESLALSTTSYKDGASS 428 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LLD+LD +R+ + + L+ +++AK YVDLY+AIG+GY Sbjct: 429 LLDVLDAQRSVSDAQASLAATVQEVAKDYVDLYVAIGAGY 468 >gi|241206136|ref|YP_002977232.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860026|gb|ACS57693.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 477 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 188/464 (40%), Positives = 287/464 (61%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K+ ++ T+ WW +F D Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHVPPEMPL-PAKFGEGGTKSDGDVTTVAWWSAFRDRK 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 L+ LV+ L QNL++ QA ERINAA N+ A P+ SH R + Sbjct: 60 LDGLVQSGLDQNLSVQQAIERINAASANVTVAGAGALPNLTVGASHTVSGQKGELRTQFD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + S G+ W +D+FG +R+ ES+LA+LDSAYA D+AKL ++ L+ SYID R++ Sbjct: 120 TRNTSGGEAQLTWLLDIFGLYKRNTESALASLDSAYASADVAKLTLVQDLVSSYIDVRYY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRISA 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA + + K QP I GIPADLIRNRPDIR E+ LA + A Sbjct: 240 HHIATLLGLPAATLVDDLLKGYG--QPVFRGGITSGIPADLIRNRPDIRVAERDLAAATA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IG+A++ LYPS+SL+GSI+ + N G T WSFGP L LPIFD G +++ ++ A+ Sbjct: 298 QIGVAQAQLYPSISLSGSISPAYINQRGIHGGLTPWSFGPTLNLPIFDGGTLRAGVKTAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S+A Y+ W+ TVL AI++VENAL+++ D + V+ LQ V+ ++++ LS +Y+ G Sbjct: 358 SNAAAAYLNWKSTVLTAIEQVENALSAVRRDARTVSALQAQVKTTQETLELSTASYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ A +Q+AK YV L IA+G G+ P Sbjct: 418 SSLLDVLDAQRQVSLAQASLAAAVQQMAKDYVSLNIAVGGGFAP 461 >gi|116253616|ref|YP_769454.1| nodulation protein [Rhizobium leguminosarum bv. viciae 3841] gi|115258264|emb|CAK09366.1| putative exported nodulation like protein [Rhizobium leguminosarum bv. viciae 3841] Length = 477 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 188/464 (40%), Positives = 287/464 (61%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP++ P MPL P +F G +K+ ++ T+ WW +F D Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDHVPPEMPL-PAKFGEGGTKSDGDVTTVAWWSAFKDRK 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 L+ LV+ L QNL++ QA ERIN+A N+ A P+ SH R + Sbjct: 60 LDGLVQSGLDQNLSVQQAIERINSASANVTVAGAGALPNLTVGASHTVSGQKGELRTQFD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + S G+ W +D+FG +R+ ES+LA+LDSAYA D+AKL ++ L+ SYID R++ Sbjct: 120 TRNTSGGEAQLTWLLDIFGLYKRNTESALASLDSAYASADVAKLTLVQDLVSSYIDVRYY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA S+L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLALSKANLKSRQETYELTKFQLEAGAASRLDVVQAEGLVQSTLAEIPGLETNIRISA 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA + + K QP I GIPADLIRNRPDIR E+ LA + A Sbjct: 240 HHIATLLGLPAATLVDDLLKGYG--QPVFRGGITSGIPADLIRNRPDIRVAERDLAAATA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IG+A++ LYPS+SL+GSI+ + N G T WSFGP L LPIFD G +++ ++ A+ Sbjct: 298 QIGVAQAQLYPSISLSGSISPAYINQRGIHGGLTPWSFGPTLNLPIFDGGTLRAGVKTAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S+A Y+ W+ TVL AI++VENAL+++ D + V+ LQ V+ ++++ LS +Y+ G Sbjct: 358 SNAAAAYLNWKSTVLTAIEQVENALSAVRRDARTVSALQAQVKTTQETLELSTASYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD +R + + L+ A +Q+AK YV L IAIG G+ P Sbjct: 418 SSLLDVLDAQRQVSLAQASLAAAVQQMAKDYVSLNIAIGGGFAP 461 >gi|450923|emb|CAA54418.1| unnamed protein product [Rhizobium leguminosarum] Length = 471 Score = 355 bits (911), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 190/464 (40%), Positives = 282/464 (60%), Gaps = 17/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M LR ++LL+GC VGP+ P MPL P +F G +K+ ++ T WW +F D+ Sbjct: 1 MVSLRFATPALLLLLSGCVVGPDLVPPEMPL-PAKFGEGGTKSDGDVATAAWWTAFKDSR 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 LN VK L QNLT+ QA ERINAA N+ + A PS S R + Sbjct: 60 LNGYVKAGLDQNLTVQQAIERINAASANVTTAGAGGLPSLTVGASQTVSGQKAELRTQLD 119 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + S G + W +DLFG +R+ ES+LA+LDSAYA D+A+L +I L+ SYID R + Sbjct: 120 TRNTSAGDVSLSWLLDLFGLYKRNTESALASLDSAYASADVARLTLIQDLVSSYIDVRFY 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++++ L ++ EL+ + GA L +V+ E ++S ++IP LE + R++ Sbjct: 180 QQRLAVSKANLKSRQETYELTKFQLEAGA-RPLDVVQAEGLVQSTLAEIPGLETNIRISA 238 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA+ + + K S QP I GIPADLIRNRPDIR +E+ LA + A Sbjct: 239 HHIATLLGLPASRLVDELLKGSG--QPVFRGGITSGIPADLIRNRPDIRSRERDLAAATA 296 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ LYPS+SL+GSI+ H N G WSFGP L LPIFD G++++N++ A+ Sbjct: 297 NIGVAQAQLYPSISLSGSISPLHVNQRGIHGGLDRWSFGPTLNLPIFDGGRLRANVKSAQ 356 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S A Y+ W+ TVL A+++VENAL+++ D + V LQ V+ +++ LS +Y+ G Sbjct: 357 SDAATAYLNWKSTVLTAVEQVENALSAVRRDAQTVAALQAQVKTTTETLELSTASYKDGA 416 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+LD ++ + + L+ + +Q+AK YV L IAIG G+ P Sbjct: 417 SSLLDVLDAQQVSL-AQASLAASVQQMAKDYVSLNIAIGGGFAP 459 >gi|241554290|ref|YP_002979503.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863596|gb|ACS61258.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 477 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 191/465 (41%), Positives = 287/465 (61%), Gaps = 18/465 (3%) Query: 1 MNI--LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 MN+ LR S +LLAGC GP + P MPL P +F G++K+ ++ +WW ++ D Sbjct: 1 MNLSSLRYAASAVTLLLAGCVSGPNHVPPEMPL-PAKFKEGSTKSNGDVVAAQWWTAYRD 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFI 109 L+ LV +NL +LQA ERIN+A N+ A PS SH R Sbjct: 60 KRLDGLVAHGRSENLDVLQALERINSASANVTVAAAGGLPSLDVGASHTVSGEKGSERTT 119 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + G+ W +D+FGQ RR ES++A+L +AYA D AKL + L+ SYIDAR Sbjct: 120 IGTTNETGGEASLSWLLDIFGQYRRSKESAIASLGAAYATADNAKLTFLKDLVESYIDAR 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++++RI+++ L ++ EL+ L+ GA S+L +V+ E ++S +SDIP LE+SF Sbjct: 180 YYQQRIALSQANLKSRQQTYELTQLQLKAGAASRLDVVQAEGLVQSTKSDIPGLEQSFTE 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + H+I+TLLG PA + +QK + QP I GIPADLIRNRPDIR E++LA + Sbjct: 240 SGHHIATLLGMPAASLMGELQKSAG--QPVFRGDIRAGIPADLIRNRPDIRKAERELAAA 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 VA IG A++ LYPS+SL+GSI+ + + G T W+FGP L LPIFD GK+++N+ Sbjct: 298 VADIGAAEAQLYPSISLSGSISPSWVKSSGASGGTLTSWTFGPTLNLPIFDGGKLRANVD 357 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +S A+ QY+ W+ VLN ++EVENAL+++ D + + L+ V+ ++S++LS +Y+ Sbjct: 358 IEKSDARTQYLAWKAAVLNGVEEVENALSAVRRDTQTLEPLRRQVQTAQESLALSTTSYK 417 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SLLD+L+ +R+ + + L+ +Q+AK YVDLY+AIG+GY Sbjct: 418 DGASSLLDVLEAQRSVSDAQESLADTVQQVAKDYVDLYVAIGAGY 462 >gi|209546453|ref|YP_002278371.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537697|gb|ACI57631.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 483 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 192/463 (41%), Positives = 284/463 (61%), Gaps = 16/463 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 ++ LR S +LL GC GP++ P MPL P +F G +K+ N+ T++WW ++ D Sbjct: 9 LSSLRYAASALTLLLTGCVSGPDHVPPQMPL-PAKFEEGGNKSNGNVVTVEWWTAYRDKR 67 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 L+ LV L +NL +LQA E INAA N+ A PS SH R Sbjct: 68 LDGLVAHGLSENLDVLQALESINAASANVTVAGAGGLPSLTVDASHTLSGEKGRLRTTVG 127 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + G+ W +D FGQ RR ES++A+L +AYA D AKL + L+ SYIDAR++ Sbjct: 128 TTNTTGGEASLSWLLDFFGQYRRSKESAIASLGAAYATADNAKLTFLKDLVESYIDARYY 187 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +ERI+++ + ++ EL+ L+ GA S+L +V+ E ++S ++DIP LEKSF + Sbjct: 188 QERIALSQASVKSRQQTYELTLLQLKAGAASRLDVVQAEGLVQSTKADIPGLEKSFTESA 247 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H+I+TLLG PA+ + +QK + QP + GIPADLIRNRPDIR E+ LA +VA Sbjct: 248 HHIATLLGMPASSLMGELQKSAG--QPVFRGDMRAGIPADLIRNRPDIRKAERDLAAAVA 305 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ LYPS+SL+GSI+ + S T WSFGP L LPIFD G +++N+ Sbjct: 306 DIGAAEAQLYPSISLSGSISPSWVKSSGAKGASLTSWSFGPSLNLPIFDGGTLRANVDIE 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +S A+ QY+ W+ VLN ++EVENALT++ D + + L+ V+ ++S++LS +Y+ G Sbjct: 366 KSDAKTQYLAWKAEVLNGVEEVENALTAVRRDTQTLEPLRRQVQTSQESLALSTASYKDG 425 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SLLD+L+ +R+ + E L+ +Q+AK YVDLY+AIG+GY Sbjct: 426 ASSLLDVLEAQRSVSDAEASLAATVQQVAKDYVDLYVAIGAGY 468 >gi|222084360|ref|YP_002542889.1| nodulation protein (outer membrane efflux protein) [Agrobacterium radiobacter K84] gi|221721808|gb|ACM24964.1| nodulation protein (outer membrane efflux protein) [Agrobacterium radiobacter K84] Length = 484 Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 178/448 (39%), Positives = 279/448 (62%), Gaps = 15/448 (3%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC GP++ P MPL P +FS G +K ++ +WW +F D+ LN L +NL I Sbjct: 17 GCVSGPDHKPPEMPL-PAKFSEGGTKINGDLAGSQWWTAFGDSKLNAFAAQGLAENLNIQ 75 Query: 77 QATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKID 127 QA ERIN A+ +++ A PS AS H R + ++TG W +D Sbjct: 76 QALERINQAQAAVITAGAGGLPSLTASGDHTTNGQKGSLRTQSETQNSTTGGASVSWLLD 135 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+GQ RR E ++A+LD+AY+ VD A+L + L SY++AR+++ RISIA L ++ Sbjct: 136 LWGQYRRAKEGAVASLDAAYSSVDTARLTYLQDLANSYVNARYYQARISIAQDNLKSRRE 195 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + L+ + GA S+L +V+ E + S S++P LE S+R +VH+I+TLL + + Sbjct: 196 TLALTKFQLEAGAASRLDVVQAEGLVNSTLSEVPGLEISYRQSVHHIATLLNVSSATVIA 255 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 MQ QP +N GIPADLIRNRPDIR E+ LA++ A+IG+A++ L+P+++L+ Sbjct: 256 QMQ--GGGRQPVFRGRVNSGIPADLIRNRPDIRVAERNLANATAQIGVAEAQLFPTITLS 313 Query: 307 GSIALT--HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 G+I+ + H +S G T WSFGP L LPIFD G +++N++ AESS++E YI WQ+TV + Sbjct: 314 GAISPSYVHTSSRSGSLTTWSFGPTLTLPIFDGGALRANVKTAESSSRELYIVWQQTVRS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A+++VENAL++++ D + V+ L+ V+ +++++ LS +Y+ G SLLD+LD +R + Sbjct: 374 AVEDVENALSAVSRDAQTVSALRAQVKSYQEALQLSTASYKDGASSLLDVLDAQRNVSTA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ A +Q A Y+ L + IG+GY P Sbjct: 434 QESLATAIQQSAIDYISLNVNIGAGYVP 461 >gi|86360104|ref|YP_471993.1| nodulation protein [Rhizobium etli CFN 42] gi|86284206|gb|ABC93266.1| nodulation protein [Rhizobium etli CFN 42] Length = 483 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 184/447 (41%), Positives = 276/447 (61%), Gaps = 16/447 (3%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC GP++ P MPL P F G K+ ++ T +WW ++ D L+ LV L++NL +L Sbjct: 25 GCVSGPDHVPPQMPL-PANFEEGGKKSNGHVVTAEWWTAYRDKPLDGLVTHGLRENLDVL 83 Query: 77 QATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKID 127 QA E IN+A N+ A PS SH R S G+ W +D Sbjct: 84 QALENINSASANVTIAGAGGLPSLTVGASHTLSGEKGRLRTTVGTTNTSGGEASLSWLLD 143 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FGQ RR ES++A+L +AYA D AKL + L+ SYIDAR+++ERI+++ L ++ Sbjct: 144 FFGQYRRSRESAIASLGAAYATADNAKLTFLKDLVESYIDARYYQERIALSQANLKSRQQ 203 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 EL+ L+ GA S+ +V+ E +KS +S+IP L++SF + H+I+TL+G PA+ + Sbjct: 204 TYELTQLQLRAGAASRPDVVQAEGLVKSTKSEIPGLQQSFTESAHHIATLIGMPASSLMG 263 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 +QK++ QP + GIPADLIRNRPDIR E++LA +VA IG A++ LYPS++L+ Sbjct: 264 ELQKRAG--QPVFRGDLRAGIPADLIRNRPDIRMAERELAAAVADIGAAEAQLYPSITLS 321 Query: 307 GSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 GSI+ + + G T WSFGP L LPIFD G +++N+ +S A+ QY+ W+ VL Sbjct: 322 GSISPSWVKSSGASGGSLTSWSFGPSLNLPIFDGGTLRANVEIEKSDAKAQYLAWKAAVL 381 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 N ++EVENALT++ D + + L+ V+ ++S++LS +Y+ G SLLDILD +R+ + Sbjct: 382 NGVEEVENALTAVRRDTQTLEPLRRQVQTAQESLALSTTSYKDGASSLLDILDAQRSVSD 441 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ +Q+AK YVDLY+AIG+GY Sbjct: 442 AQASLAATVQQVAKDYVDLYVAIGAGY 468 >gi|222106969|ref|YP_002547760.1| nodulation protein T precursor [Agrobacterium vitis S4] gi|221738148|gb|ACM39044.1| nodulation protein T precursor [Agrobacterium vitis S4] Length = 483 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 184/465 (39%), Positives = 289/465 (62%), Gaps = 21/465 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M +R ++LL+GC +GPE++ P L P +F+ G +K+ + T++WW +FND Sbjct: 1 MVSVRLAAPFAMLLLSGCVMGPEHSPPQTAL-PAKFTEGGTKSAQDTTTVQWWTAFNDAR 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN----- 115 LN L+ + QNL +LQA ERI A+ +++ A PS + S +TN Sbjct: 60 LNTLINQGVNQNLDVLQALERIEQARATVVTSSAGGLPSLTGTASES---GSQTNGGYNS 116 Query: 116 ------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 S G+L + W +DL+GQ RR +S+ A+LD+AYA VD ++L +S L +YIDAR Sbjct: 117 QPRAWESKGELSASWLLDLWGQYRRAKQSATASLDAAYASVDTSRLTYLSDLATAYIDAR 176 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +++ RI+IA++ + ++ + L+ L+ GA S+L +V+ E + S +DIP E +F Sbjct: 177 YYQARIAIANEAVKSRRETLALTKLQLEAGAASRLDVVQSEGLVNSQLADIPGFEANFYS 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 N ++ISTLLG PA+ ++ ++K + QP + GIPADLIRNRPDIR E+ LA + Sbjct: 237 NAYHISTLLGLPASTLINDLKKHAP--QPVARRVVLSGIPADLIRNRPDIRKAERDLAAA 294 Query: 289 VAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 V IG A++ L PS++L+GSI+ H N+ NT WSFGP L LPIFD G +++N++ Sbjct: 295 VYDIGNAQAQLLPSITLSGSISPSYVHSNTHGTANT-WSFGPSLNLPIFDGGTLRANVKN 353 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+S A+E+Y+ W++TVLN +++VE+AL + N D + V + V+ +K+++ LS +Y+ Sbjct: 354 AQSVAREKYLAWKQTVLNGVEDVESALAAYNRDARAVAANRAYVKSYKEALELSTASYKD 413 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G SLLD+LD +R + L+ + +Q+A YV L +AIG GYN Sbjct: 414 GASSLLDVLDAQRELTTAQASLAESIQQMANDYVTLNVAIGGGYN 458 >gi|128491|sp|P24145|NODT_RHILT RecName: Full=Nodulation protein T; Flags: Precursor gi|46245|emb|CAA35773.1| nodT protein (AA 1-467) [Rhizobium leguminosarum] Length = 467 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 186/464 (40%), Positives = 283/464 (60%), Gaps = 15/464 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M R F +LL+GC VGP Y P MPL P +FS G + ++ + WW +FND Sbjct: 1 MRFTRYTTPFFSLLLSGCVVGPNYAPPEMPL-PAKFSEGGVTSNGDVTVVAWWTAFNDPM 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPN 111 L V+ + QNL + QA ERI+ A N+ A P S SH R Sbjct: 60 LTSYVEQGISQNLDVQQAIERIDLAAANVTIAEASALPDLTLSGSHTVSGQKGKLRKQTY 119 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 STG+L W +D +R+ ES+ A LD+AYA VD+AKL I+ +I SY+DAR+++ Sbjct: 120 TSNTSTGELSLSWLLDFGVYKRNTESAEAALDAAYASVDMAKLAFINDIISSYVDARYYQ 179 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++++ L ++ EL+ KF GA +++ +V+ E ++S ++IP+L+ +FR++ H Sbjct: 180 RRLALSQANLKSRRETFELTKSKFAAGAVARMDVVRAEGLVQSTLAEIPSLDANFRISAH 239 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+TLLG PA + + K SN QP +N+GIPAD+IRNRPDIR E+ LADS A+ Sbjct: 240 RIATLLGKPAGSMVEEIAKGSN--QPAFRADVNVGIPADIIRNRPDIRKAERDLADSTAQ 297 Query: 292 IGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ L+PS++L+GSI+ + ++ G T WSFGPKL LPI D G +++++ A+ Sbjct: 298 IGVAEAKLFPSITLSGSISPSGGINERGVYGNLTPWSFGPKLKLPILDGGGLRADVDSAK 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S A Y+ W+ VLNAI++VENAL ++ + + V L+ VE+ ++++ LS +Y+ G Sbjct: 358 SKATVSYLKWKSRVLNAIEQVENALVAMQREGRTVRALKREVEIAQETLRLSTSSYKDGA 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SLLD+L+ +R+ + + L+ A ++ AK Y L IAIGSGYNP Sbjct: 418 SSLLDLLEAQRSLSVTQASLARAVQEWAKLYAVLNIAIGSGYNP 461 >gi|327190840|gb|EGE57905.1| nodulation protein [Rhizobium etli CNPAF512] Length = 447 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 187/435 (42%), Positives = 274/435 (62%), Gaps = 16/435 (3%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MPL P +F S + N+ +WW ++ D LN LV L++NL +LQA E IN+A N Sbjct: 1 MPL-PAKFEESGSTSNGNVVNDEWWTAYRDKQLNGLVTHGLRENLDVLQALESINSASAN 59 Query: 89 ILSVRADLFPSSYASISH-------RFIPNL-KTNSTGQLDS-DWKIDLFGQ-RRHIESS 138 + A PS SH R ++ TN+TG S W +D FGQ RR ES+ Sbjct: 60 VTVAGAGGLPSLTVGASHTLSGEKGRLRTSVGATNTTGGEASLSWLLDFFGQYRRSRESA 119 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 +A+L +AYA D AKL + L+ SYIDAR+++ERI+++ L ++ EL+ L+ G Sbjct: 120 IASLGAAYATADNAKLTFLKDLVESYIDARYYQERIALSRASLKSRQQTYELTQLQLKAG 179 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 A S+L +V+ E ++S +SDIP LEKSF + H+I+TL+G PA+ + +QK + QP Sbjct: 180 AASRLDVVQAEGLVQSTKSDIPGLEKSFTESAHHIATLIGMPASSLMGELQKSAG--QPV 237 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 + GIPADLIRNRPDIR E++LA +VA IG A++ LYPS+SL+GSI+ + S Sbjct: 238 FRSDLRAGIPADLIRNRPDIRKAERELAAAVANIGAAEAQLYPSISLSGSISPSWVKSSG 297 Query: 319 GYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 T WSFGP L LPIFD GK++SN+ +S A+ QY+ W+ VLN ++EVENALT+ Sbjct: 298 AKGASLTSWSFGPSLNLPIFDGGKLRSNVDIEKSDARTQYLAWKAAVLNGVEEVENALTA 357 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + D + + L+ V+ ++S++LS ++Y+ G SLLD+LD +R+ + + L+ +Q+ Sbjct: 358 VRRDTQALEPLRRQVQTAQESLALSTVSYKDGASSLLDVLDAQRSVSDAQASLATTVQQV 417 Query: 436 AKSYVDLYIAIGSGY 450 AK YVDLY+AIG+GY Sbjct: 418 AKDYVDLYVAIGAGY 432 >gi|71040804|gb|AAZ20314.1| putative outer membrane protein NodTpc [Rhizobium etli] Length = 483 Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 181/447 (40%), Positives = 268/447 (59%), Gaps = 16/447 (3%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC GP++ P MPL P F G K+ ++ T +WW ++ D L+ LV L++NL +L Sbjct: 25 GCVTGPDHVPPQMPL-PANFEEGGKKSNGHVVTAEWWTAYRDKPLDGLVTHGLRENLDVL 83 Query: 77 QATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKID 127 QA E IN+A N+ A PS SH R S G+ W +D Sbjct: 84 QALENINSASANVTIAGAGGLPSLTVGASHTLSGEKGRLRTTVGTTNTSGGEPSLSWLLD 143 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FGQ RR ES++A+L +AYA D AKL + L+ SYIDAR+++ERI+++ L ++ Sbjct: 144 FFGQYRRSRESAIASLGAAYATADNAKLTFLKDLVESYIDARYYQERIALSQANLKSRQQ 203 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 EL+ L+ GA S+ +V+ E +KS +S+IP L++SF + H+I+TL+G PA+ + Sbjct: 204 TYELTQLQLRAGAASRPDVVQAEGLVKSTKSEIPGLQQSFTESAHHIATLIGMPASSLMG 263 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 +QK++ QP + GIPADLIRNRPDIR E++LA +VA IG A++ LYPS++L+ Sbjct: 264 ELQKRAG--QPVFRGDLRAGIPADLIRNRPDIRMAERELAAAVADIGAAEAQLYPSITLS 321 Query: 307 GSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 GSI+ + + G T WSFGP L LPIFD G +++N+ +S A+ QY+ W+ VL Sbjct: 322 GSISPSWVKSSGASGGSLTSWSFGPSLNLPIFDGGTLRANVEIEKSDAKAQYLAWKAAVL 381 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 N ++EVENALT++ D + A ++LS +Y+ G SLLDILD +R+ + Sbjct: 382 NGVEEVENALTAVRRDTQTAGAAAPAGADGAGIVALSTTSYKDGASSLLDILDAQRSVSD 441 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ +Q+AK YVDLY+ IG+GY Sbjct: 442 AQASLAATVQQVAKDYVDLYVPIGAGY 468 >gi|218462910|ref|ZP_03503001.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli Kim 5] Length = 478 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 161/398 (40%), Positives = 244/398 (61%), Gaps = 15/398 (3%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MPL P +F G +K++ ++ T WW +FND LN V+ L+QNLT+ QA ERINAA N Sbjct: 1 MPL-PAKFGEGGTKSVGDVATAAWWTAFNDPKLNGYVQAGLEQNLTVQQAIERINAASAN 59 Query: 89 ILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESS 138 + A PS SH R + + S G + W +DLFG +R ES+ Sbjct: 60 VTIAGAGGLPSLNVGASHTISGQKGELRTQFDTRNTSAGDVQLSWLLDLFGLYKRSTESA 119 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A+LDSAYA D+AKL ++ L+ SYID R +++R++++ L ++ EL+ + G Sbjct: 120 AASLDSAYASADVAKLTLVQDLVSSYIDVRFYQQRLALSRANLKSRQETFELTKFQLEAG 179 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 A S+L +V+ E ++S ++IP LE + R++ H+I+TLLG PA+ ++ + + QP Sbjct: 180 AASRLDVVQAEGLVQSTLAEIPGLETNIRVSAHHIATLLGLPASALVNELLRGGG--QPV 237 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--S 316 IN GIPADLIRNRPDIR E+ LA + A IG+A++ LYPS+SL+GSI+ ++ N Sbjct: 238 YRGGINSGIPADLIRNRPDIRVAERDLAAATANIGVAEAQLYPSISLSGSISPSYINQRG 297 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 G T WSFGP L LPI D G++++N++ A+S A Y+ W+ TVL A+++VENA ++ Sbjct: 298 VHGALTPWSFGPTLNLPILDGGRLRANVKSAQSEAATAYLNWKSTVLTAVEQVENAFAAV 357 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 D + V L+ V+ ++++ LS +Y G SLLD+ Sbjct: 358 RRDARTVAALRAQVKTTQETLELSTASYNDGASSLLDV 395 >gi|116254620|ref|YP_770456.1| putative nodulation protein [Rhizobium leguminosarum bv. viciae 3841] gi|462727|sp|P15727|NODT_RHILV RecName: Full=Nodulation protein T; Flags: Precursor gi|581512|emb|CAA35177.1| unnamed protein product [Rhizobium leguminosarum] gi|115259268|emb|CAK10402.1| putative nodulation protein [Rhizobium leguminosarum bv. viciae 3841] Length = 482 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 174/458 (37%), Positives = 279/458 (60%), Gaps = 11/458 (2%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M+ R ++ +LL+ C +GP++ P PL P +FS G ++ ++ WW+SF+D + Sbjct: 1 MHSFRLAAAVLPLLLSSCMLGPDHAPPETPL-PEKFSEGAKQSAGDVAVSAWWDSFSDRT 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----IPNLKTN 115 LN+ V L +NL++ QA ER+NAA ++ A P + + S I + + Sbjct: 60 LNQYVASGLDENLSVQQALERVNAAAADVTIAGAGGLPKASHTTSGEIGKGGDITSTQNI 119 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S+ QL W +D+FGQ RR ES+LA+LDSA+A VD AKL +I L+ SYIDAR++++R+ Sbjct: 120 SSVQLSLTWLLDVFGQYRRSTESALASLDSAHAAVDAAKLALIKDLVSSYIDARYYQQRV 179 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 SI+ L ++ + ++L+ GA S+ +++ E ++S ++IP LE +FR++ H+I+ Sbjct: 180 SISRANLKSRQETYDFTNLQVEAGAASRQDVLQAEGLVRSTIAEIPRLELNFRVSAHHIA 239 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL P+ + +QK QP IN GIPADLIRNR DIR E+ LA + A+IG+ Sbjct: 240 ALLALPSETVIKQLQKSEG--QPVYRGKINAGIPADLIRNRFDIRQAERDLAAATAQIGV 297 Query: 295 AKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A++ LYP+++L+GSI ++ G WSFGP L LPI D G++++N+ ++S A Sbjct: 298 AEAQLYPAITLSGSITPSYIKQRGRHGGILKWSFGPSLDLPILDGGRLRANVETSKSDAA 357 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 YI+W+ TVL A++EVE+ALT++ D + VE ++++ LS +Y G SLL Sbjct: 358 AAYISWKLTVLTAVQEVEDALTAVRRDVHTENSRRRQVETIEEALKLSTASYTDGASSLL 417 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D+L+ +R + + L+ A +QLAK +V L +AI G+ Sbjct: 418 DVLEAQRQVSSAQASLAAAIQQLAKDHVRLNVAIRGGF 455 >gi|260425364|ref|ZP_05779344.1| RND efflux system, outer membrane lipoprotein, NodT family [Citreicella sp. SE45] gi|260423304|gb|EEX16554.1| RND efflux system, outer membrane lipoprotein, NodT family [Citreicella sp. SE45] Length = 620 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 140/461 (30%), Positives = 244/461 (52%), Gaps = 25/461 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M R + ++ L+ C VGP++ P P+ F+ G+++ + WW S+ND Sbjct: 161 MKPTRLVLVPMVLALSACAVGPDFRSPSQPVA-ANFAEGSAQPIGEASAQYWWRSYNDAM 219 Query: 61 LNKLVKIALQQNLTILQATERINAAKENIL----------SVRADLFPSSYASISHRFIP 110 LN+LV+ L QNL I A R+ A+ SV D + +IS Sbjct: 220 LNELVQTGLSQNLDIKTAISRVAEAQAAARATGLPAMISGSVSGDSIRAGGEAIS----- 274 Query: 111 NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T S + +DLFG +RR E++LA+L SA V A+L +S+L+ SYID R+ Sbjct: 275 GTTTTSGASFNPSLVLDLFGGERRSREAALASLQSAELSVGAARLTFLSQLVSSYIDLRY 334 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ ++I Q L ++ + L + GA + L + +A + + +P+LE F + Sbjct: 335 YQNALTITRQTLGTRRETLSLVQSQREAGAATALDEAQAQAALDESLASLPSLESGFYAS 394 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I+TLL P +Q+ + QP + G+PADL+RNRPD+R E+ A +V Sbjct: 395 SYAIATLLAQPVQTIEARLQRGAA--QPRPGGNASAGVPADLLRNRPDVRAAERDYAAAV 452 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A +G++++ +YPS+SL G+++ + WSFGPK+ LP+ ++G + + +A + Sbjct: 453 ANVGVSEAQMYPSVSLGGTVSTSEGVG------SWSFGPKVSLPVLNQGVLAAKRDQAIA 506 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A++ + W+ +VL A++EV+ + + +++ V Q +V +++ +SLS Y G Sbjct: 507 QAEQAELGWRSSVLGAVEEVQASQSDYIRNQRAVAAYQRSVNSYERVVSLSRETYNGGTT 566 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LLD LD++R+ A + L+ + R LA S+ L +A G G+ Sbjct: 567 TLLDFLDVQRSLASSRLTLASSVRDLAASWATLQVAAGKGW 607 >gi|118591601|ref|ZP_01548998.1| RND efflux system, outer membrane lipoprotein, NodT [Stappia aggregata IAM 12614] gi|118435929|gb|EAV42573.1| RND efflux system, outer membrane lipoprotein, NodT [Stappia aggregata IAM 12614] Length = 501 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 141/452 (31%), Positives = 241/452 (53%), Gaps = 13/452 (2%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIA 68 + LL+ C+VGP+Y +P + + P ++ + ++ L WW D LN L+ +A Sbjct: 30 MAATLLSACSVGPDYQRPDISV-PGKWRNATGETPASVPQLANWWTQLGDAQLNSLIALA 88 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL-----DSD 123 +Q NL + A ++ A+ + + LFPS + + ++S G L D+ Sbjct: 89 VQNNLDVRTAKAKVREARASYKQASSSLFPSLDGAAGVTRSKSSGSDSVGTLWNGGFDAA 148 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID+FG RR E++ LD+A + + L +I L +Y++AR ++R+ +A Sbjct: 149 WEIDIFGANRRAREAAKYGLDAAEEDLRASLLTLIGDLATNYVEARGLQQRLKLAQDTAR 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + +L +F G++S L + E + S E++IP L+ + ++H +S L G T Sbjct: 209 SQQSSADLIRKRFQAGSSSGLDVANAEGQAASTEANIPALKTALAASMHRLSVLTGQQPT 268 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 Q ++N P +PI +GIPA ++ RPD+R E++LA + AKIG A + YPS Sbjct: 269 ALTD--QLLASNRIPTPKLPIPVGIPASILLTRPDVRLAERQLAQATAKIGQATAARYPS 326 Query: 303 LSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL GSI D G N+ W+FGP L +PIF+ GK+ + + AE+ + ++ +Q Sbjct: 327 VSLTGSIGTAAADFGDLGKNSSISWAFGPSLSVPIFNAGKLAAGVEIAEAQRDQYFLAYQ 386 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +VL A+++VENAL +++K V + + E +K + LS Y+ G S LD LD ER Sbjct: 387 ASVLTALEDVENALVGFTQERKRVASQRRSAESYKSAAELSRSLYQTGAASFLDALDAER 446 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +T + L ++ +L Y+ L A+G G+ Sbjct: 447 STYSAQDTLIQSRVRLTTYYIALQKALGGGWT 478 >gi|146342522|ref|YP_001207570.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. ORS278] gi|146195328|emb|CAL79353.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. ORS278] Length = 495 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 143/458 (31%), Positives = 234/458 (51%), Gaps = 26/458 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 LLAGC VGP+Y P P ++S ++ + +WW + D L++L+ A+ NL Sbjct: 18 LLAGCAVGPDYVTPDFGT-PARWSSDRNQPAQQLRLAQWWRNLGDAPLDQLIGEAVSGNL 76 Query: 74 TILQATERINAAKENILSVRADLFP---------------SSYASISHRFIPNLKTNSTG 118 + A RI A+ LFP S+ A I+ P + Sbjct: 77 DVAAAKARIREARATQRQAVGALFPTVSGTSSATETRSAGSTTAGIA--IAPTTSSQFQA 134 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 DS W++DLFG RR +E++ +D+A + L +I + +YIDAR ++ R+++A Sbjct: 135 GFDSSWELDLFGANRRAVEAASYGVDAAKDDLRATLLTLIGDVASNYIDARAYQARVALA 194 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + ++ L+ K G+ S + K A S E+ IPT E S++ +H + LL Sbjct: 195 QRTAASQRETAALTARKQEAGSASAVDTAKASALAASTEATIPTYESSYQQALHRLGVLL 254 Query: 238 GYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G T Q+ S + P P+ GIPAD++ RPDIR E++LA AKIG A Sbjct: 255 GRDPTAL---SQRLSRSLPIPAPRRPLPKGIPADVLVMRPDIRKAERQLAQFTAKIGQAT 311 Query: 297 SDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + LYP +SL G++ AL + WS GP L +PIF+ GK+++ + AE+ E Sbjct: 312 AALYPDISLTGTVSTSALKLGDLGKSSTIGWSIGPSLSVPIFNGGKLQAAVEVAEAQRDE 371 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ W+ VL+A+++VENA+ ++ +++ + L + + ++ LS Y+ G + LD Sbjct: 372 YHVAWRSAVLSALEDVENAIVNLGQERLRIRSLTESARRYNEAARLSRGLYQTGSSTFLD 431 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER+ E L ++ LAK+YV L A+G G++ Sbjct: 432 VLDAERSQFTAEDSLLASRAALAKNYVALAKALGGGWS 469 >gi|90423378|ref|YP_531748.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] gi|90105392|gb|ABD87429.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 509 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 137/467 (29%), Positives = 242/467 (51%), Gaps = 26/467 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSL 61 A + +LAGC VGP+Y P + L PT ++ N+K D +WW ND L Sbjct: 25 ATLVVAATMLAGCAVGPDYGPPGIEL-PTAWA--NAKPPRTAPPVADLRQWWRRLNDPLL 81 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRF 108 ++L++ A++ NL++ A RI A+ LFP S+ ++ S + Sbjct: 82 SRLIEEAVESNLSVASAKARIREARATRRQAIGALFPLLNGTGSATRNQVSASSTTSGQA 141 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + D+ W++D+FG RR +E++ +D+A + L ++ + Y +A Sbjct: 142 LTSTYNQFQAGFDASWELDIFGANRRGVEATSYGVDAAEDDLRATLLTLVGDVAAYYAEA 201 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ RI++A + ++ L+ KF G++S + + K A+ + E++IPT + + Sbjct: 202 RGYQARIALARRTAASQRETAALTQRKFDAGSSSAVDVAKASAQAATTEANIPTYQVGYS 261 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 VH + LLG T + + + P L P+ GIPAD++ RPD+R E++LA Sbjct: 262 EAVHRLGVLLGREPTALEQQLARGTAIPSPRL--PLPKGIPADVLVMRPDVRKAERQLAQ 319 Query: 288 SVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 AKIG A++ LYPS+SL GS+ AL + WS GP L +PIF+ G++++ + Sbjct: 320 YTAKIGQAEAALYPSVSLTGSVSTSALKIGDLAKNSTIGWSVGPTLSVPIFNGGQLRAAV 379 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +E+ + Y+ W+ VL A+++VENA+ ++ +++ + L A ++ + LS Y Sbjct: 380 EISEAQRDQYYVAWRSAVLTALEDVENAIVALAQEQLRIRSLAEASRRYRDAARLSRSLY 439 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S LD+LD ER+ E L ++ +A S++ L +G G++ Sbjct: 440 ETGSSSFLDVLDAERSLYTAEDSLLQSRVTVATSFIALAKGLGGGWD 486 >gi|319407782|emb|CBI81433.1| putative outer membrane protein [Bartonella sp. 1-1C] Length = 494 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 147/461 (31%), Positives = 247/461 (53%), Gaps = 24/461 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFS---IGNSKNLINID----TLK-WWESFNDT 59 F LF +L GC VGP+Y K T FS I ++ + TL WW++FND Sbjct: 18 FCLFFFVLPGCVVGPDYHK-------TSFSVPEIWGQESFVQTSERPATLAGWWKNFNDP 70 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTN 115 L+KL+ A+ N +I A R+ A+ ++ L PS +SI S R + Sbjct: 71 ILDKLIHDAIAANNSIAVAKARVREARASLGQSIGRLSPSVSSSIVGTHSSRQSDTSLSQ 130 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G D+ W++DLFG +R +E++ LD+A + + ++ + +YI+ R +++++ Sbjct: 131 YRGGFDASWELDLFGGHKRAVEAARYGLDAAVEDLRATMVTLLGDIATNYIEMRGWQQKL 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 SIAH I +K +L K G S+L +A++ + E+DI +E + M++H +S Sbjct: 191 SIAHSIAASQRKTAQLIEAKLEAGDISELDNSNAQAQMINTEADILQMEVNLSMSIHRLS 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G ++QK + Q P PI++GIPAD++ RPD+R E++ A + A+IG Sbjct: 251 VLTGCVPIALQDFLQKSAKKKQIPRPKWPISVGIPADILLTRPDLRRAERQYAQATARIG 310 Query: 294 IAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +++ YPSLSL G+I+ T ++ G WSFGP + P F+ G++ ++I A + Sbjct: 311 QREAERYPSLSLTGNISTTAESMGQLAKGSTIGWSFGPSIRFPFFNGGQVVASIAVARAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +I ++ VL A++EVENAL + ++++ + KL A + S+ LS + G S Sbjct: 371 RDQAFIAYRAAVLGALEEVENALVRLYKEQQRLKKLLAANAAYSHSLKLSKDLFESGNTS 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L+ R+ ++ LS + LAK YV L A+G G+N Sbjct: 431 FLELLNAYRSYYSSQMSLSDSYIALAKHYVALMKALGGGWN 471 >gi|148257444|ref|YP_001242029.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. BTAi1] gi|146409617|gb|ABQ38123.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. BTAi1] Length = 504 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/452 (30%), Positives = 230/452 (50%), Gaps = 20/452 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC VGP+Y P + P +S + + +WW + D L++L+ A+ NL + Sbjct: 17 GCAVGPDYVTPDFGV-PNSWSSDRGRPAPALKLAQWWHNLADPQLDQLITEAVGGNLDVA 75 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-------------QLDSD 123 A RI A+ LFPS + S + +++ G DS Sbjct: 76 SAKARIREARATQRQAIGALFPSISGTGSATETRSASSSTGGVAIGPTTYSQYQAGFDSS 135 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++DLFG RR +E++ +D+A + L +I + +YIDAR ++ R+++A + Sbjct: 136 WELDLFGANRRAVEAASYGVDAADDDLRATLLTLIGDVASNYIDARAYQARVALAKRTAA 195 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ L+ K G+ S + K A S E+ IPT E S++ VH + LLG T Sbjct: 196 SQRETAALTERKQNAGSASAVDTAKANALAASTEATIPTYESSYQQAVHRLGVLLGRDPT 255 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + + + P+ +P+ GIPAD++ RPD+R E++LA AKIG A + LYP Sbjct: 256 ALSLRLSRAT--VIPSPRLPLPKGIPADVLVMRPDVRKAERQLAQYTAKIGQATAALYPD 313 Query: 303 LSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL+G++ AL + WS GP L +PIF+ GK+++ + AE+ + ++ WQ Sbjct: 314 VSLSGTVSTSALKLGDLGKNSTIGWSIGPSLSVPIFNGGKLQAAVEVAEAQRDQYHVAWQ 373 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 VL+A+++VENA+ ++ +++ + L + + ++ LS Y G + LD+LD ER Sbjct: 374 SAVLSALEDVENAIVNLAQERIRIRSLTESARRYSEAARLSRSLYETGSSTFLDVLDAER 433 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E L ++ LAK YV L A+G G+ Sbjct: 434 SQFTAEDSLLASRATLAKDYVALAKALGGGWT 465 >gi|192290998|ref|YP_001991603.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris TIE-1] gi|192284747|gb|ACF01128.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris TIE-1] Length = 501 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 138/470 (29%), Positives = 236/470 (50%), Gaps = 31/470 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L V+L GC VGP+Y P + P Q+S +WW D +L++LV A+ Sbjct: 5 LVAVMLGGCAVGPDYRTPLL-ATPAQWSGAGVATPAAPVLPRWWARLRDPTLDRLVVEAV 63 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------------PNLKTNST 117 NL + A+ R+ A+ + L P+ + S R PNL S+ Sbjct: 64 DGNLDVATASARVREARASYRQAVGALLPTIANTESARLAKGTGVASAAPGRPNLGGPSS 123 Query: 118 ------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 D+ W++DLFG RR +E++ +D++ + L ++ + SY Sbjct: 124 VVGSDGTSGLYQAGFDASWELDLFGANRRAVEAAAYGIDASDENLRAVLLTLVGDVASSY 183 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++AR ++ RI++A + + +++ + G S + L + + + IPTLE Sbjct: 184 VEARGYQARIALARRTATSQDETTKITRNRLAAGTGSAVDLATATGQAAATRAAIPTLET 243 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ VH +S L G P + + + P L P+ GIPAD++ RPD+R E++ Sbjct: 244 AYAQTVHRLSVLTGRPPSALSALLARPKPIPAPKL--PVPAGIPADVLLTRPDVRLAERR 301 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTH--WSFGPKLYLPIFDKGKIK 341 A S A+IG A++ LYPS+SL G+IA + G N+ WS GP L +PIF+ GK++ Sbjct: 302 YAQSTARIGQAEAALYPSVSLAGNIATSGTKLGDLGRNSSISWSLGPTLTVPIFNGGKLR 361 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + AE+ +Q++ +Q +VL A+K+VE+AL S++ + L + ++++ SLS Sbjct: 362 AAVEIAEAQRDQQFLAYQASVLTALKDVEDALVSLSNEHSRSRILATSTTAYRQAASLSQ 421 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S LD+L ER+ E L ++ ++ Y+ L A+G G++ Sbjct: 422 SLYRSGSSSFLDVLTAERSLYSAEDALLQSRVKIVSDYIALNKALGGGWD 471 >gi|319782575|ref|YP_004142051.1| RND efflux system, outer membrane lipoprotein, NodT family [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168463|gb|ADV12001.1| RND efflux system, outer membrane lipoprotein, NodT family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 496 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/456 (30%), Positives = 238/456 (52%), Gaps = 17/456 (3%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIA 68 L VLLAGC VGP+Y P + +P +S L KWW+ D LN LV+ A Sbjct: 19 LTAVLLAGCVVGPDYQTPIL-AMPANWSGQKPTKPAQPARLSKWWQRLRDPELNTLVEEA 77 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---------GQ 119 + NL + A +I A+ + L PS+ S S + +T S Sbjct: 78 VAGNLDVATAKAKIREARASYRQSAGTLLPSADGSGSASRNKSAETTSGSDATYSEYQAG 137 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG RR +E++ L+++ ++ L ++ + Y AR ++ RI++A Sbjct: 138 FDASWELDLFGANRRGVEAARYGLNASQEELRSTLLTLVGDVASYYTQARGYQARIALAR 197 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + ++ EL+ G + + K + S E+ +PTLE S+ VH ++ L G Sbjct: 198 RSAASQRQTAELTRTMAQAGTATAADVAKAMGQAASTEAAVPTLEASYAQAVHRLAVLAG 257 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P +++ + P L P+ GIPADL+ +RPD+R E++ A AKIG A++ Sbjct: 258 RPPASLNERLKRVAPIPAPRL--PMPTGIPADLLLSRPDLRMAERQYAQYTAKIGQAEAA 315 Query: 299 LYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPS+SL G I AL + + WSFGP L +P+F+ G++++ + A++ + + Sbjct: 316 RYPSVSLTGDISTAALKLGDLGKNSSIGWSFGPTLSVPLFNAGQLQAAVEFAKAQRDQYF 375 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I ++ +VL A+++VENAL +++++ + KL + + + ++ SL Y+ G SLLD+L Sbjct: 376 IAYRSSVLTALEDVENALVLLSQERIRIGKLASSAKSYGEAASLEGTLYKAGETSLLDVL 435 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R+ E L ++ LA +Y+ L A+G G++ Sbjct: 436 DAQRSLYSAEDSLLQSRVLLATNYIALNKALGGGWD 471 >gi|83943997|ref|ZP_00956454.1| hypothetical protein EE36_10140 [Sulfitobacter sp. EE-36] gi|83845244|gb|EAP83124.1| hypothetical protein EE36_10140 [Sulfitobacter sp. EE-36] Length = 452 Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/445 (31%), Positives = 252/445 (56%), Gaps = 19/445 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+AGC VG +Y +P + + T+F GN++ + + T +WW ++ D++L LV L QN Sbjct: 10 LLVAGCAVGTDYQRPEVAM-ETRFVGGNAEQIGAVATQQWWLNYKDSNLTSLVTRGLAQN 68 Query: 73 LTILQATERINAAKENI--LSVRADLFPSSYASISHRFIPNLKTNST---GQLDSDWKID 127 L ++ A ERI A+ + V A S S++ ST G L + ID Sbjct: 69 LDVIAAGERIRQAQAELRTTGVNAAADGSLTGSVTTSGGDGTSGTSTVESGSLGASLVID 128 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG RR E+++A+L +A A+ + +L +++LI +Y DAR+++E +++ + ++ Sbjct: 129 LFGGIRREREAAVASLTAARAEEETVRLAWLAELIAAYSDARYYQEAMALTRTAIATREE 188 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + ++ +F GA ++ + + +A + + +D+P F NV+ I+TLL PA Sbjct: 189 TVSITRSQFNAGAATEYEVAEAQALLSTARADLPQFAALFDANVYAIATLLNEPAGPIKA 248 Query: 247 YMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 MQK + P L P G+PADL+RNRPD+R E LA +VA +G+A++ LYP+LS Sbjct: 249 QMQKGA----PQLSSPGDARTGVPADLLRNRPDVRSAEADLAAAVANVGVAEAALYPALS 304 Query: 305 LNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 L+G++ T WSFGP+L LP+F++G +K++ S A++ I W+ ++ Sbjct: 305 LSGTVGRTDATD------AWSFGPQLSLPVFNQGLLKASRDAQLSVARQAEIAWRASINE 358 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A+++V+ ++++ ++ L+ A + ++++L+ NYR G +LL++L+ +R T Sbjct: 359 AVEDVQVTQSNLSRARQRAQLLRTAASDYSRALTLAQENYRNGAITLLNLLETDRNTNAA 418 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 + + A + A+++ L IA G+G Sbjct: 419 RISAASATNEAAQAWATLKIATGAG 443 >gi|222082588|ref|YP_002541953.1| nodulation protein (outer membrane efflux protein) [Agrobacterium radiobacter K84] gi|221727267|gb|ACM30356.1| nodulation protein (outer membrane efflux protein) [Agrobacterium radiobacter K84] Length = 502 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 136/464 (29%), Positives = 241/464 (51%), Gaps = 33/464 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L C VGP+Y KP++ LP+++S +SK + + +WW+ F D +LN L++ A Sbjct: 27 CCTTILTSCVVGPDYEKPNV-ALPSRWSGQASSKTATSPNLTEWWKQFRDPTLNALIEEA 85 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-----------------SYASISHRFIPN 111 +Q NL + A +I A+ + L P+ + AS+ + F P Sbjct: 86 VQTNLDVATAKAKIREARATYREQKGTLLPTVEGTASATRNRVAASDGAAASVYNEFQPG 145 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 D+ W++DLFG +R E++ +D+A + + ++ + Y+ AR + Sbjct: 146 F--------DASWELDLFGGNKRSAEAARYGVDAAEEDLRDTLVTLVGDVTTYYVQAREY 197 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +A + +K L+ +F G + + E S E+DIPT + S+ +V Sbjct: 198 QALRDLAKRTAVSQRKTAALTQEEFAAGTVTGVDAANANGEASSTEADIPTYQISYAQSV 257 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H ++ LLG P ++ + QP L + + GIPA+++ +RPD+R E++LA A Sbjct: 258 HKLAVLLGKPPAALDERLKATAAIPQPPLKV--STGIPANILTSRPDVRLAERQLAQYTA 315 Query: 291 KIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRA 347 KIG+A+++ YPS+SL GSI + D + G + W+FGP L +PIF G++K+ + A Sbjct: 316 KIGVAEANRYPSISLTGSITSSATDLADLGRKSTIGWAFGPTLTVPIFQGGQLKAAVDVA 375 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + YI +Q VL A+++VENA+ S+ ++K KL + ++ + LS + G Sbjct: 376 KAERDQYYIAYQAAVLTAMQDVENAIVSLTQEKIKNAKLVSSASSYRTAADLSRQLNKAG 435 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++LD ER+ E L +K +A Y+ L+ A+G G++ Sbjct: 436 ATDFLNVLDAERSLYSAESSLIQSKAAIATDYISLHKALGGGWD 479 >gi|312114769|ref|YP_004012365.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodomicrobium vannielii ATCC 17100] gi|311219898|gb|ADP71266.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodomicrobium vannielii ATCC 17100] Length = 512 Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 140/457 (30%), Positives = 238/457 (52%), Gaps = 20/457 (4%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L + L C VGP+Y + PL P+ ++ + + + +WW FND L+ L++ A+ Sbjct: 36 LLVSTLGACAVGPDY-QFSAPLTPSHWANASDRKAPRLS--RWWTRFNDRILDALMEEAV 92 Query: 70 QQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNS--TGQL--- 120 NL + A +I A+ LFP S A+ S + + T+S G L Sbjct: 93 AGNLDVATAKAKIREARATYRQTFGSLFPTLTNSESATRSQTSVASSGTSSPAVGSLYQA 152 Query: 121 --DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 D+ W++DLFG RR +E++ +D+A + L ++ + Y+ AR ++ RI++A Sbjct: 153 GFDASWELDLFGANRRAVEAAAYGVDAAEENLQATLLTLVGDVASYYVQARGYQARIALA 212 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + ++ +++ KF G+TS + + + S + IPT E S+ VH++S LL Sbjct: 213 RRTATSQEETAQITRNKFAAGSTSAVDVANATGQAASTRATIPTFETSYAEVVHSLSILL 272 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + P L +P GIPAD++ NRPD+R E++ A AK+G A++ Sbjct: 273 GKPPAALNERLAVVRPIPAPRLTVPA--GIPADVLLNRPDVRLAERQYAQYTAKVGQAEA 330 Query: 298 DLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS SL GSI+ + + + WSFGP L +PIF+ G++++ + AE+ + Sbjct: 331 ARYPSASLTGSISTSAAKTGDLGKSSSIGWSFGPTLTVPIFNAGQLEAAVAVAEAQRDQY 390 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +I ++ VLNA+ +VENAL S+ ++K+ L + ++++ SLS Y+ G LD+ Sbjct: 391 FIAYKSAVLNALGDVENALVSLAKEKRRTQSLDLSASSYRQASSLSRSLYQSGAAGFLDV 450 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L ER+ E L ++ +A Y+ L A+G G+N Sbjct: 451 LTAERSAFSAEDALIQSRVLIATDYIALNKALGGGWN 487 >gi|319409385|emb|CBI83029.1| putative outer membrane protein [Bartonella schoenbuchensis R1] Length = 482 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 140/461 (30%), Positives = 240/461 (52%), Gaps = 24/461 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLIN---IDTLKWWESFNDTS 60 F ++L+GC VGP+Y K T FS+ G I+ + WW FND Sbjct: 16 FLCVFLMLSGCAVGPDYHK-------TSFSVPAVWGRKSAQISDHSVALAGWWRRFNDPV 68 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFI--PNLK-TNS 116 LN+L+ A+ N + A R+ A+ ++ L PS SIS +RF P++ + Sbjct: 69 LNELIDDAISGNNNVAVAKARVREARASVGQTAGYLAPSVSGSISGNRFSEQPDVSLSQY 128 Query: 117 TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G D+ W++DLFG +R +E++ LDS + + ++ + +Y++ R +++++ Sbjct: 129 RGGFDASWELDLFGGHKRAVEAARYGLDSTVEDMRATMVTLLGDVATNYVEMRGWQQKLL 188 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA +I+ +K EL K G S+L +A++ + E+DI +E S M++H +S Sbjct: 189 IARRIVVSQRKTFELMRTKLAAGEASELDFSNAQAQMANTEADIFQIEASLAMSIHRLSV 248 Query: 236 LLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G T ++QK + P PI +GIPAD++ RPD+R E++ A + A+IG Sbjct: 249 LTGRVPTALEAFLQKSAKKEGAIPQPQWPIPVGIPADILLTRPDLRRAERQYAQATARIG 308 Query: 294 IAKSDLYPSLSLNGSIALTHDN-SFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++D YPSL+L G I+ T G ++ WSFGP L P FD G+ +++ A + Sbjct: 309 QREADRYPSLTLTGRISTTATQIGHLGESSTIGWSFGPGLQFPFFDGGQRAASVEMARAQ 368 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +IT++ VL A+++VENAL + ++ + + KL A +S+ LS + + G S Sbjct: 369 RDQAFITYRAEVLGALEDVENALVRLYKEHQRLEKLTVANTAALRSLKLSQLLFENGDIS 428 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD R+ ++ L + +A Y+ L A+G G++ Sbjct: 429 FFEFLDARRSYYSAQMALKNSYVNVALQYIALMKALGGGWD 469 >gi|114764657|ref|ZP_01443842.1| nodulation protein [Pelagibaca bermudensis HTCC2601] gi|114542857|gb|EAU45878.1| nodulation protein [Roseovarius sp. HTCC2601] Length = 453 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/452 (30%), Positives = 252/452 (55%), Gaps = 27/452 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++ L CTVGP++ P PL T F+ G+++ + + WW S++D L++LV+ L+Q Sbjct: 10 VLALCACTVGPDHEPPIQPLAAT-FAEGDAQPVGDAALQSWWRSYDDALLSELVQAGLRQ 68 Query: 72 NLTILQATERINAAKENIL----------SVRADLFPSSYASISHRFIPNLKTNSTGQL- 120 NL I A R+ A+ + AD + IS TN++G + Sbjct: 69 NLDIRTALSRVAEAQAAARATGLPAQVSGGLTADTIRAGGEEISG------TTNTSGAIF 122 Query: 121 DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +DLFG +RR E++LA+L +A V A+L ++S L+ +YID R+++ ++I+ + Sbjct: 123 APALMLDLFGGERRSREAALADLQAAELGVGTARLALLSALVSNYIDLRYYQNALAISRE 182 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + + L + GA + L + +A + ++ +P LE+ + + I+TLL Sbjct: 183 TVATRRDTLSLVQSQREAGAATALDEAQAQAALDEAQATLPGLEQGYYAATYAIATLLAQ 242 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 PA +Q+ QP + G+PADL+RNRPD+R E +LA + A+IG++++ L Sbjct: 243 PAQGLEARLQR--GAAQPRPGSSASAGVPADLLRNRPDLRAAEAELAAATARIGVSEAQL 300 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 YPSL L G++ ++F G N+ WS+GP+L +P+ ++G +++N A + AQ+ + W+ Sbjct: 301 YPSLRLGGTV-----STFEGVNS-WSYGPQLSIPVLNQGVLRANRDAAVAQAQQAELGWR 354 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 VL A++EV+ A + + D++ V + +V +++++LS Y G +LLD L+++R Sbjct: 355 GAVLGAVEEVQAAQSDVLRDRRAVAGYRRSVASFERAVALSRTTYEGGTTTLLDYLEVQR 414 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + A + L+ + R LA S+ L +A G G++ Sbjct: 415 SLAAARLTLASSVRDLAASWARLQVAAGKGWS 446 >gi|49476203|ref|YP_034244.1| hypothetical protein BH15480 [Bartonella henselae str. Houston-1] gi|49239011|emb|CAF28311.1| hypothetical protein BH15480 [Bartonella henselae str. Houston-1] Length = 494 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 132/457 (28%), Positives = 240/457 (52%), Gaps = 16/457 (3%) Query: 7 IFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +F FI +GC VGP Y K +P + + S S ++ + WW ND LN L Sbjct: 19 LFCFFI--FSGCMVGPNYQKTSFRVPAVWGEQSEKTSGRMVTL--AGWWRHLNDPVLNAL 74 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-----GQ 119 + A+ N + A R+ A+ + L PS +SIS + +++++ Sbjct: 75 MNDAISGNNNVAVAKARVREARAGLGQTVGSLLPSVSSSISGTRNGSEQSDASLSQYRSG 134 Query: 120 LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++D FG +R +E++ L++A + + ++ + +Y+ R +++++ I Sbjct: 135 FDASWELDFFGGHKRAVEAAHYGLEAAVEDMRATMVTLLGDVATNYVQVRGWQQKLLIVR 194 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 QI +K EL K T G S+L + +A++ + E+DI +E + M++H +S L G Sbjct: 195 QIAASQRKTYELMRAKLTAGDASELDISNAQAQVANTEADIAQMEANLAMSIHRLSVLTG 254 Query: 239 YPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + T +QK + + P + PI GIPAD++ RPD+R E++ A + A+IG ++ Sbjct: 255 HVPTALRDLLQKNAKQAKIPQPHWPIPAGIPADILLTRPDLRRAERQYAQATARIGQREA 314 Query: 298 DLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + YPSL+L GSI A D + WSFGP L P F+ G+I +++ A + + Sbjct: 315 ERYPSLTLTGSISTAATAIDQLWKNSTIGWSFGPGLRFPFFNGGQIVASVAVARAQRDQA 374 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +IT++ VL A+++VENAL + ++ + + KL A + ++S+ LS + G S L++ Sbjct: 375 FITYRAAVLGALEDVENALVRLTKEHQRLEKLIIANKAFQRSLQLSRSLFENGNTSFLEL 434 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ +R+ ++ L ++ L Y+ L A+G G++ Sbjct: 435 LNADRSYYSAQMALKDSRISLVTQYIALMKALGGGWD 471 >gi|227819849|ref|YP_002823820.1| NodT, RND efflux system, outer membrane lipoprotein [Sinorhizobium fredii NGR234] gi|227338848|gb|ACP23067.1| putative NodT, RND efflux system, outer membrane lipoprotein [Sinorhizobium fredii NGR234] Length = 515 Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 133/450 (29%), Positives = 230/450 (51%), Gaps = 18/450 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIALQQNLTI 75 GC VGP+Y +P LPT + + L +WW F D L+ L+ A++ NL + Sbjct: 40 GCVVGPDYEQPRF-ALPTHWGSKEEQKPARPPELSQWWRQFRDPLLDTLIAEAVEGNLDV 98 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFI----------PNLKTNSTGQLDSDWK 125 A +I A+ + L PS S S P++ G D+ W+ Sbjct: 99 ALAKAKIREARATYREQQGTLLPSVDGSASATRTRSTSSVAGSEPSVYNQYQGGFDASWE 158 Query: 126 IDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DLFG RR +E++ ++A ++ + ++ + YI AR ++ +++A + Sbjct: 159 LDLFGGNRRGLEAARYGAEAAEEELRDTLVTLVGDVTSYYIQAREYQSLLALARRSAASQ 218 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +L+ + G + + K +A+ S E+DIPT + S+ VH +S L+G P Sbjct: 219 RETAKLTREQLAAGEATGVDDAKADAQATSTEADIPTYQISYAQTVHRLSILIGQPPAAL 278 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 ++K P P+ GIPADL+ NRPD+R E++LA S AKIG A+++ YPS+S Sbjct: 279 EGRLKK--GGAVPLPKSPVAAGIPADLLVNRPDVRLAERQLAQSTAKIGQAEANRYPSIS 336 Query: 305 LNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G A L+ + + WSFGP L +PIF+ G++K+ + A++ + Y +Q Sbjct: 337 LTGDTATSALSTSDLGKKSSIGWSFGPTLTVPIFNGGQLKATVDVAKAQRDQYYAAYQAA 396 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL+A+++VENA+ S+++ + KL + ++++ LS G LD+LD ER+ Sbjct: 397 VLSAMEDVENAIVSLSQTRARYAKLTSSTASYRRAAELSRTLNEAGAVDFLDVLDAERSL 456 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E L ++ +A ++ L A+G G++ Sbjct: 457 YTAEEALIRSRADIAIYFIALNKALGGGWD 486 >gi|163869206|ref|YP_001610458.1| putative outer membrane protein [Bartonella tribocorum CIP 105476] gi|161018905|emb|CAK02463.1| putative outer membrane protein [Bartonella tribocorum CIP 105476] Length = 492 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 137/458 (29%), Positives = 242/458 (52%), Gaps = 23/458 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLIN---IDTLKWWESFNDTSLN 62 + LL+GC VGP Y K T FS+ G I+ I WW S ND LN Sbjct: 19 MLCFLLSGCMVGPNYHK-------TSFSVPARWGQQSAQISGHSIALAGWWRSLNDPVLN 71 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ--- 119 L+ A+ N + A RI A+ ++ V L P++ +IS + ++++ Q Sbjct: 72 TLMDEAVSGNNDVAVAKARIREARASLGQVVGSLLPNASNTISGTRSGSKQSDALNQYRS 131 Query: 120 -LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 LD+ W++D FG +R +E++ L++A + + ++ ++ +Y+ R +++++ I Sbjct: 132 GLDASWELDFFGGHKRGVEAAQYGLEAAVEDMRATMVILLGEVATNYVQMRGWQQKLLIV 191 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 QI +K EL K T G S+L + +A++ + E+DI +E + M++H +S L Sbjct: 192 RQIAATQRKTYELMQTKLTAGDISELDVSNAKAQMANTEADISQMEANVAMSMHRLSVLT 251 Query: 238 GYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G+ T +QK + + + P PI GIPAD++ RPD+R E++ A + A+IG + Sbjct: 252 GHVPTALKDLLQKNAKHVKIPQPQWPIPAGIPADILLTRPDLRRAERQYAQATARIGQRE 311 Query: 297 SDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 ++ YPSL+L G+I A D + WSFGP L P F+ G+I +++ A + + Sbjct: 312 AERYPSLTLTGNISTAATAMDQLWKSSTIGWSFGPNLRFPFFNGGQIVASVAMARAQRDQ 371 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +IT++ VL A+++VENAL + ++ + + KL A + S+ LS + G S L+ Sbjct: 372 AFITYRAAVLGALEDVENALVRLTKEHQRLEKLVVANKAFLHSLQLSRSLFENGNTSFLE 431 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R+ ++ L ++ LA Y+ L A+G G++ Sbjct: 432 LLNADRSYYSAQMALKDSRIALATQYIALMKALGGGWD 469 >gi|260466898|ref|ZP_05813081.1| RND efflux system, outer membrane lipoprotein, NodT family [Mesorhizobium opportunistum WSM2075] gi|259029294|gb|EEW30587.1| RND efflux system, outer membrane lipoprotein, NodT family [Mesorhizobium opportunistum WSM2075] Length = 497 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 135/453 (29%), Positives = 237/453 (52%), Gaps = 17/453 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIALQQ 71 VLLAGC VGP+Y P + +P +S + L +WW+ D L+ LV+ A+ Sbjct: 22 VLLAGCVVGPDYRTPIL-AMPANWSGERPTKSVQPAQLSRWWQRLRDPQLDTLVEEAVAG 80 Query: 72 NLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ-------LDS 122 NL + A +I A+ + A L PS S++ + T S D+ Sbjct: 81 NLDVATAKAKIREARASYRQTAATLLPSVDGSGSVTRNKSADTTTGSNATYTEYQAGFDA 140 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DLFG RR +E++ +D++ ++ L ++ + +Y AR ++ RI++A + Sbjct: 141 SWELDLFGANRRGLEAARYGVDASEQELRSTLLTLVGDVASTYTQARGYQARIALARRSA 200 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ EL+ G+ + + K + S E+ +PTLE S+ VH +S L G P Sbjct: 201 VSQRQTAELTRTMALAGSATAADVAKAMGQAASTEASVPTLEASYAEAVHRLSVLTGRPP 260 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +++ P L P+ GIPAD++ +RPD+ E++ A AK+G A++ YP Sbjct: 261 AALSERLKRSKPIPSPRL--PMPTGIPADILLSRPDVLMAERQYAQYTAKVGQAEAARYP 318 Query: 302 SLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S+SL G+I+ D G N+ WSFGP L +P+F+ G++++ A + + +I + Sbjct: 319 SVSLTGNISTAALDLGDLGKNSSIGWSFGPTLSVPLFNAGQLQAAADVARAQRDQYFIAY 378 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + +VL A+++VENAL + +++ + KL + + + ++ SL Y+ G SLLD+LD + Sbjct: 379 RASVLTALEDVENALVLMAQERIRIGKLASSAKSYGEAASLEGTLYKAGETSLLDVLDAQ 438 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ E L ++ LA +Y+ L A+G G++ Sbjct: 439 RSLYSAEDSLLQSRVLLATNYIALNKALGGGWD 471 >gi|86749360|ref|YP_485856.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] gi|86572388|gb|ABD06945.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] Length = 518 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 144/468 (30%), Positives = 234/468 (50%), Gaps = 29/468 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKL 64 A+ L L+GC VGP+Y P + L + K + L +WW ND LN+L Sbjct: 33 AVLLLCATALSGCAVGPDYVVPGIELPTAWRNARPPKTPPAVPQLSEWWRRLNDQLLNRL 92 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPN 111 ++ A+ NL + A RI A+ LFP+ S S I Sbjct: 93 IEEAVASNLDVASAKARIREARATRRQAIGALFPTLDGSGSATRNQVSASSTSGGSAITT 152 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G DS W++D+FG RR++E++ +D A + L +I + Y AR + Sbjct: 153 YNQFQAG-FDSSWELDIFGANRRNVEATTYGVDVAEDDLRATLLTLIGDVTSYYAQARGY 211 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + RI++A + ++ L+ KF G++S + + K A+ S E++IPT E S+ +V Sbjct: 212 QARIALARRTAASQRETAALTQRKFDAGSSSAVDVAKAAAQAASTEANIPTFEISYAESV 271 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H + LLG + + P L P+ GIPAD++ RPD+R E++LA A Sbjct: 272 HRLGVLLGREPSALSPLLAGVKPIPAPRL--PLPKGIPADVLVMRPDVRKAERQLAQYTA 329 Query: 291 KIGIAKSDLYPSLSLNGSIALT-------HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 IG A++ LYPS+SL GS++ T NS G WS GP L +PIF+ G++++ Sbjct: 330 LIGKAEAALYPSVSLTGSVSTTALKIGDLGKNSTIG----WSIGPSLSVPIFNGGQLRAA 385 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +E+ + Y+ W+ VL+A+++VENA+ S+++ +K + L + + ++ LS Sbjct: 386 VEISEAQRDQYYVAWRAAVLSALEDVENAIVSLSQQRKRIGNLSESARRYAEAARLSRSL 445 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S LD+LD ER+ E L + +A SY+ L +G G++ Sbjct: 446 YETGSSSFLDVLDAERSLYTAEDSLLDTRVSVATSYIALAKGLGGGWD 493 >gi|319899427|ref|YP_004159524.1| outer membrane protein [Bartonella clarridgeiae 73] gi|319403395|emb|CBI76963.1| putative outer membrane protein [Bartonella clarridgeiae 73] Length = 494 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 142/466 (30%), Positives = 251/466 (53%), Gaps = 23/466 (4%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPH--MPLLPTQ-FSIGNSKNLINIDTLKWWESFND 58 +L FS+F VL GC VGP+Y K +P + Q FS+ S++ + + WW +FND Sbjct: 13 GLLYPFFSVFFVL-PGCVVGPDYHKTSFSVPAIWGQHFSVQTSEHPVAL--AGWWRNFND 69 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-- 116 L++L+ A+ N ++ A R+ A+ ++ L PS +S + N ++ Sbjct: 70 LVLDELINDAIAANNSVAVAKARVREARASLGQATGYLSPS----VSSLILGNHSSSQPD 125 Query: 117 ------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G D+ W++DLFG +R +E++ LD+ + + ++ + +Y++ R Sbjct: 126 ISLRQYRGGFDASWELDLFGGHKRAVEAAGYGLDATVEDLRATMVTLLGDIATNYVEMRG 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +++++SIA I L K +L K G S+L +A++ + E+DI +E + M+ Sbjct: 186 WQQKLSIARSIAALQHKTAKLMGAKLEAGDISELDNSNAQAQMINTEADILQMEANLSMS 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +H +S L G ++QK + Q P PI++GIPAD++ RPD+R E++ A + Sbjct: 246 IHRLSVLTGRVPLALQDFLQKGAKKKQIPQPKWPISVGIPADILLTRPDLRRAERQYAQA 305 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIR 345 A+IG ++D YPSLSL G+I+ T + +T WSFGP L P F+ G++ +++ Sbjct: 306 TARIGQREADRYPSLSLTGNISTTAESIGQLAKSSTIGWSFGPNLRFPFFNGGQVVASVA 365 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + + +IT++ VL A++EVENAL + ++++ + KL A + S+ LS + Sbjct: 366 VARAQRDQAFITYRAAVLGALEEVENALVQLYKEQQRLKKLLAANSAYSHSLQLSQGLFE 425 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L++L+ R+ ++ L ++ LAK Y+ L A+G G+N Sbjct: 426 SGNTSFLELLNAYRSYYSSQMSLRDSRIALAKHYIALMKALGGGWN 471 >gi|319404822|emb|CBI78423.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 494 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 142/456 (31%), Positives = 243/456 (53%), Gaps = 14/456 (3%) Query: 8 FSLFIVLLAGCTVGPEYTKPH--MPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKL 64 F LF +L GC VGP+Y K +P + Q S + + L + TL WW +FND L+ L Sbjct: 18 FCLFFFVLPGCVVGPDYRKTSFSVPAIWGQHS--SVQTLEHSATLAGWWRNFNDPILDAL 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----TGQL 120 + A+ N +I A R+ A+ ++ L PS +SI + S G Sbjct: 76 IHDAIAANNSIAVAKARVREARASLGQSIGHLSPSISSSIVGTHGSSQSDTSLSQYRGGF 135 Query: 121 DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++DLFG +R +E++ LD+A + + ++ + +Y++ R +++++SIA Sbjct: 136 DASWELDLFGGHKRAVEAARYGLDAAVEDLRATMVTLLGDIATNYVEMRGWQQKLSIARS 195 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 I +K +L K G S+L A++ + E+DI +E + M++H +S L G Sbjct: 196 IAASQRKTAQLIEAKLKAGDISELDNSNARAQMINTEADILQMEVNLSMSIHRLSVLTGR 255 Query: 240 PATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++QK + Q P PI++GIPAD++ RPD+R E++ A + A+IG +++ Sbjct: 256 VPIALQDFLQKSAKKKQIPKPKWPISVGIPADILLTRPDLRRAERQYAQATARIGQREAE 315 Query: 299 LYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPSLSL G+I+ T ++ G WSFGP + P F+ G++ ++I A + + + Sbjct: 316 RYPSLSLTGNISTTAESVGQLAKGSTIGWSFGPNIRFPFFNGGQVVASIAVARAQRDQAF 375 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I ++ VL A++EVENAL + ++++ KL A + S+ LS + G S L++L Sbjct: 376 IAYRAAVLGALEEVENALVRLYKEQQRFKKLLAANAAYSHSLKLSQDLFESGNTSFLELL 435 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + R+ ++ LS + LAK Y+ L A+G G+N Sbjct: 436 NAYRSYYSSQMSLSDSSITLAKHYIALMKALGGGWN 471 >gi|316934461|ref|YP_004109443.1| RND efflux system outer membrane lipoprotein [Rhodopseudomonas palustris DX-1] gi|315602175|gb|ADU44710.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris DX-1] Length = 554 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 138/470 (29%), Positives = 236/470 (50%), Gaps = 31/470 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L VLL GC VGP+Y P + P Q+S + +WW D +L++LV A+ Sbjct: 58 LAAVLLGGCAVGPDYRTPLL-ATPAQWSRAGASTPAPPVLPRWWTRLRDPTLDRLVVEAV 116 Query: 70 QQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFI--------PNLKTNST 117 NL + A+ R+ A+ + L P S AS++ PNL + S+ Sbjct: 117 DGNLDVATASARVREARASYRQAVGALLPAITNSDSASLAKGMGVPSAAPGRPNLSSPSS 176 Query: 118 ------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 D+ W++DLFG RR +E++ +D++ + L ++ + SY Sbjct: 177 VAGSEGTSGLYKAGFDASWELDLFGANRRAVEAAAYGIDASDENLRAVLLTLVGDVASSY 236 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++AR ++ RI++AH+ + ++ + G S + L + + + IP LE Sbjct: 237 VEARAYQARIALAHRTALSQDETTTITRNRLAAGTASAVDLATATGQAAATRAAIPALET 296 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ VH +S L G P + + P L P+ GIPAD++ RPD+R E++ Sbjct: 297 AYAQTVHRLSVLTGRPPAALSALLARPKPVPTPKL--PVPAGIPADVLLTRPDVRLAERR 354 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTH--WSFGPKLYLPIFDKGKIK 341 A S A+IG A++ LYPS+SL G+IA + G N+ WS GP L +PIF+ GK++ Sbjct: 355 YAQSTARIGQAEAALYPSVSLAGNIATSGTRLGDLGRNSSISWSLGPTLTMPIFNGGKLR 414 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A++ Q++ +Q +VL A+K+VE+AL +++ ++ L + ++++ SLS Sbjct: 415 AAVEIAQAQRDAQFLAYQASVLTALKDVEDALVALSNERVRGRILATSTTAYRQAASLSQ 474 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S LD+L ER+ E L ++ ++ Y+ L A G G++ Sbjct: 475 SLYRSGSSSFLDVLTAERSLYSAEDALLQSRVRIVSDYIALNKAFGGGWD 524 >gi|218507899|ref|ZP_03505777.1| nodulation protein [Rhizobium etli Brasil 5] Length = 339 Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 134/315 (42%), Positives = 190/315 (60%), Gaps = 16/315 (5%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MPL P +F S + N+ +WW ++ D LN LV L++NL +LQA E IN+A N Sbjct: 1 MPL-PAKFEESGSTSNGNVVNDEWWTAYRDKQLNGLVTHGLRENLDVLQALESINSASAN 59 Query: 89 ILSVRADLFPSSYASISH-------RFIPNLK-TNSTGQLDS-DWKIDLFGQ-RRHIESS 138 + A PS SH R ++ TN+TG S W +D FGQ RR ES+ Sbjct: 60 VTVAGAGGLPSLTVGASHTLSGEKGRLRTSVGATNTTGGEASLSWLLDFFGQYRRSRESA 119 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 +A+L +AYA D AKL + L+ SYIDAR+++ERI+++ L ++ EL+ L+ G Sbjct: 120 IASLGAAYATADNAKLTFLKDLVESYIDARYYQERIALSRASLKSRQQTYELTQLQLKAG 179 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 A S+L +V+ E ++S +SDIP LEKSF + H+I+TL+G PA+ + +QK + QP Sbjct: 180 AASRLDVVQAEGLVQSTKSDIPGLEKSFTESAHHIATLIGMPASSLMGELQKSAG--QPV 237 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDN 315 I GIPADLIRNRPDIR E++LA +VA IG A++ LYPS++L+GSI+ + Sbjct: 238 FRGDIRAGIPADLIRNRPDIRKAERELAAAVADIGAAEAQLYPSMTLSGSISPSWVKSSC 297 Query: 316 SFPGYNTHWSFGPKL 330 + G T WSFGP L Sbjct: 298 ASGGSLTSWSFGPSL 312 >gi|319406307|emb|CBI79944.1| putative outer membrane protein [Bartonella sp. AR 15-3] Length = 470 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 134/448 (29%), Positives = 238/448 (53%), Gaps = 12/448 (2%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVKIALQQN 72 + GC VGP+Y K + PT + +S + WW +FND L++L+ A+ N Sbjct: 1 MPGCVVGPDYRKTSFSV-PTLWGQHSSAQISEHPAALAGWWRNFNDPVLDQLINDAIVAN 59 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----TGQLDSDWKIDL 128 I A R+ A+ ++ V L PS +SI + S G D+ W++DL Sbjct: 60 NNIALAKARVREARASLGQVIGHLLPSVSSSILGNHSSSQSDTSLRQYRGGFDASWELDL 119 Query: 129 FG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG +R +E++ +LD+ + + ++ + +YI+ R +++++ IAH I L +K Sbjct: 120 FGGHKRAVEAARYDLDATVEDLRATMVTLLGDIATNYIEMRGWQKKLLIAHSIAALQRKT 179 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +L K G S+L +A++ + E+DI +E + M++H +S L G + Sbjct: 180 AQLIKAKLEAGDISELDNSNAQAQMINTEADIIQMEVNLSMSIHRLSVLTGRVPVALQDF 239 Query: 248 MQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 +QK + Q P PI++GIPAD++ RPD+R E++ A + A++G +++ YPSLSL Sbjct: 240 LQKSAEKKQLPKPKWPISVGIPADILLTRPDLRRAERQYAQATARVGQREAERYPSLSLT 299 Query: 307 GSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G+I+ T ++ G WSFGP L P F+ G++ +++ + + +I ++ VL Sbjct: 300 GNISTTAESIGQLAKGSTIGWSFGPNLRFPFFNGGQVVASVAVGRAQRDQAFIAYRAAVL 359 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A++EVENAL + ++++ + KL A + S+ LS + G S L++L+ R+ Sbjct: 360 GALEEVENALVRLYKEQQRLKKLLAANAAYSHSLQLSQGLFESGNISFLELLNAYRSYYS 419 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS + LAK Y+ L A+G G++ Sbjct: 420 SQMSLSDSHIVLAKHYIALMKALGGGWD 447 >gi|77920683|ref|YP_358498.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] gi|77546766|gb|ABA90328.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] Length = 503 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/453 (28%), Positives = 244/453 (53%), Gaps = 21/453 (4%) Query: 18 C-TVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNLT 74 C VGP+Y P + P + G L+ T+ WW +F D L++ ++ A + NL Sbjct: 36 CIAVGPDYAPPDIKT-PDDWRSGQDPALVPDQSVTVDWWATFEDPLLDQYIEQAGRNNLD 94 Query: 75 ILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNSTGQ--------LDSD 123 I QA RI A+ ++ + R +P + A +I R N ++ G+ LD+ Sbjct: 95 IRQAVSRIREARASLGAARGAWWPEANAKGSAIRQRSSENGMYSTGGKTETLYNTGLDAS 154 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+IDLFG+ RR +E++ A+ ++ ++V +++ +Y D R ++ R++ A ++ Sbjct: 155 WEIDLFGRIRRSVEAAQADYQASEEDRRDVLISVFAEVARTYFDIRTYQARLAAAQGNIE 214 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ ++L+ +F G + L + + E + + +++IP L+ +V+ ++ LLG Sbjct: 215 SQQQVLKLTRSRFRNGLATGLDVAQAEQVLAASQAEIPPLQVGLTRSVNTLAVLLGQAPG 274 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 ++K + P + + G+PADL+R RPDIR E++LA A+IG+A +DLYPS Sbjct: 275 SLSEQLEKPAPIPVPPARVAV--GVPADLLRQRPDIRRAERQLAAQTARIGVATADLYPS 332 Query: 303 LSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 LSL+G+ A + N G + + FGP L +FD G++++ I ++ ++ ++++ Sbjct: 333 LSLSGTFAFEAIDAGNLLKGSSRAFGFGPTLRWMLFDGGRVRAQIAVQDAKTEQALLSYE 392 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++VL A+ EVENAL+ + ++ L+ +V+ ++S+ L+ YR G ++LD +R Sbjct: 393 QSVLEALNEVENALSQYLNQRNRLSALERSVQAAQRSLKLATRLYRDGLVDFQNVLDAQR 452 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + E L+ A+ + V LY +G G+NP Sbjct: 453 SLFDNENQLAAARGDTSIYLVQLYKTLGGGWNP 485 >gi|310778926|ref|YP_003967259.1| RND efflux system, outer membrane lipoprotein, NodT family [Ilyobacter polytropus DSM 2926] gi|309748249|gb|ADO82911.1| RND efflux system, outer membrane lipoprotein, NodT family [Ilyobacter polytropus DSM 2926] Length = 482 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 245/462 (53%), Gaps = 29/462 (6%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIA 68 +++ GCT VGP+Y P + + P +++ S N N + L +WWE F+D L++L+K A Sbjct: 21 VLVFTGCTAVGPDYVSPKVKV-PEKWNGEKSVNFNNENRLSEQWWELFDDPMLDELIKEA 79 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ 119 NL + +A R++ + + V + +PS S + + T Sbjct: 80 SVSNLDLKEAMARVDEYRSRLGVVTGERYPSIGVEGDLLRQKTSENAGYTGTTNTYKALG 139 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L++ W+IDLFG+ RR IE++ AN + + ++++ S++ +YI R ++ R+ ++ Sbjct: 140 LEAGWEIDLFGRVRRSIEAAKANYEVVQEDRNDVRISINSRIALNYIKIRTYQARLEASN 199 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L ++ + ++ +F G + L + + E + S E+ +P L ++ ++ LLG Sbjct: 200 SNIELQREVLRITESRFKYGLATALEVAQAEQALASSEATVPPLRIQLSEAINTMAVLLG 259 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPI-----NIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 E M ++ + IP+ IG+PAD++R RPDIR E++LA A++G Sbjct: 260 RNPGELNQLMSEKKS-------IPVPPADAAIGVPADILRQRPDIRSAERQLAVETARVG 312 Query: 294 IAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IAK+DLYP SL+GS ++ N F ++S GP L IF G I + I ++ Sbjct: 313 IAKADLYPQFSLSGSFGYQSVSSGNLFSSGGNYFSIGPSLRWNIFSGGSILNQIDVQDAI 372 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ + ++ VLNA+ E EN +T+ ED + L+ VE KK++ LS+ Y+QG Sbjct: 373 VRQKALQYESIVLNALNEAENTMTAYTEDSMRLKHLEKTVEASKKTVKLSLNLYKQGLVD 432 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++L+ + + E L+ A+ A+ +V LY A+G G+NP Sbjct: 433 FENVLNSQLSQFTSEDRLAQARGDSAEDFVRLYAALGGGWNP 474 >gi|90425980|ref|YP_534350.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] gi|90107994|gb|ABD90031.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 505 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 135/453 (29%), Positives = 236/453 (52%), Gaps = 17/453 (3%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L + LA C P LP +F+ G S N + WW + L++L++ L Sbjct: 15 LTVCALAACKTSDGRHPPEF-RLPDRFTTG-SVNPVPNPYQTWWRRVGNHELSQLIERGL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKTNSTGQLD 121 NL I +A +RIN A + + AD FP S+ +I T+S G L+ Sbjct: 73 ANNLDIARAVDRINVASQRVTIAGADAFPQVGVGATTQSFGTIPAGVTGTTSTHSAG-LN 131 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W +D G+ + +S A L +A +L ++ LI +YID +F I++ Sbjct: 132 VSWLLDFNGKIAKQKSASEAELRAAGYDFANVRLAYLADLIATYIDMNYFARTIAVTEGS 191 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + + + L G +S+L + + +A++ ++ + +P L++ + ++I+TL+G Sbjct: 192 IKNAEDTVTLVRNMKELGTSSELDIAQAQADLATLRASLPALQRDRTIAANHIATLIGVA 251 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A + S + +P L + GIPADLIRNRPDIR +E+ L + +IG+A++DL Sbjct: 252 AGSL---TLQGSRSLEPLLSADVGAGIPADLIRNRPDIRVKEQLLYAAAERIGVARADLL 308 Query: 301 PSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 PS++LNG+I + G W+F + P+FD + ++ IR A++ +Y+ W Sbjct: 309 PSVTLNGTINAALSPTIYGMLGGGTWAFASSILAPVFDGERRQATIRLAQADCHLRYLDW 368 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ VL A++EVEN LTSI ++ + L+ +V ++KS+SL+ G LL ++D + Sbjct: 369 RQNVLVAVEEVENLLTSIKRGQRELASLRDSVAANEKSLSLTRAAMTGGTGILLGVIDAQ 428 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ + + L+ ++RQLA+ + L IAIG+G + Sbjct: 429 RSLNRSRLALAQSQRQLARFQISLQIAIGAGAD 461 >gi|301064154|ref|ZP_07204601.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] gi|300441774|gb|EFK06092.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] Length = 518 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 132/462 (28%), Positives = 245/462 (53%), Gaps = 24/462 (5%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPT-QFSIGN-SKNLINIDTLKWWESFNDTSLNKLVK 66 + + +L+GC +GP + P PL P Q + G +++ +WWE FND LNKL++ Sbjct: 10 VVMAILSGCAMIGPNFNPPEAPLAPKWQETEGAYTRSDTKAYDSRWWEVFNDPVLNKLIE 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF--------IPNLKTNST 117 +A QQNLT+ A R+ A+ + V L+P A+ S+ + P S Sbjct: 70 LAYQQNLTLQIAGLRVLEARAQLGVVVGSLYPQVQQATGSYSYNRASGGGAEPYFSGASI 129 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G D+ W++D +G+ RR I+S+ ANL + A D A + + +++ +Y+ R F+ERI + Sbjct: 130 G-FDAGWELDFWGKFRRSIQSADANLMANMAGYDDALVTLTAEVARAYVQIRTFEERIRL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + + K+ +E+S +F GA S+L + + + + + +P + R H +S L Sbjct: 189 AEENIRIQKRALEISEARFKSGAVSELDVQQARTLLNTTRAAVPAFQILLRQTQHALSVL 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG P + + + P+ + + +G+PADL++ RPDIR E + ++IG+AK Sbjct: 249 LGMPPQDLDGLL--EGPRIIPDAPVQVAVGVPADLLKRRPDIRQAELQAVAQCSRIGVAK 306 Query: 297 SDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +DL+PS+SL GS+ + ++ F + +S GP +F+ G+I +++R + Sbjct: 307 ADLFPSISLLGSLGWSTTDAGRSSLGDLFQSSSFGFSVGPSFQWNLFNYGRITNSVRVQD 366 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + Q+ ++ TVLNA +EVE+A+T K + +V+ +++ +S+I Y G Sbjct: 367 ARFQQTLTLYRNTVLNAAREVEDAMTGFMRSKIQAVYQEESVKAAQRTSEISLIQYTAGT 426 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +L ++ ++ + + K +A + V +Y A+G G+ Sbjct: 427 IAYESVLTSTQSLSQQQDQYAQTKGNIALNLVAMYKALGGGW 468 >gi|87310416|ref|ZP_01092546.1| outer membrane efflux family protein [Blastopirellula marina DSM 3645] gi|87286915|gb|EAQ78819.1| outer membrane efflux family protein [Blastopirellula marina DSM 3645] Length = 530 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 135/457 (29%), Positives = 237/457 (51%), Gaps = 28/457 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI--DTLKWWESFNDTSLNKLVKIALQQNLT 74 GC +GP++ P P LP +S + L + D++ WW FND L++++ QQNLT Sbjct: 15 GCLIGPDHCDPGAPFLP-HWSRPLPEGLTDEPNDSVAWWTKFNDPVLSEMMVRTAQQNLT 73 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFI---------------PNLKTNSTGQ 119 + QA ERI A+ R LFP + +S+ I P+ S Sbjct: 74 LGQAYERIAEARAQRAIARGGLFPDFFMDMSYSRIKSSNNGSPIGLTFQTPSFNYWSASL 133 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +D+ W+ID++G RR+++++ A++D A + +++ + +Y+ AR + RI IA Sbjct: 134 VDASWEIDVWGAVRRNLQAANADIDVAIEDHNAILVSLQGDVGANYVQARTLQHRILIAQ 193 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + L +++++++ K G SKL + + + + S ES IP+L ++ + + ++ L G Sbjct: 194 RNVQLQRQSLQIAETKLEAGTVSKLDVYQARSNLYSTESLIPSLRQNLDIAYNRLAVLQG 253 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + + F+ IP NI G+P ++IR RPDIR E++LA ++IG+A Sbjct: 254 MPPQDLTNEVMGARQLFK----IPDNIAVGLPIEIIRQRPDIRMAERQLAAQASRIGVAM 309 Query: 297 SDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D+ P +LNG++ A + D F G + ++FGP + G++ NI + +E Sbjct: 310 ADMLPRFTLNGTLGVNATSIDQWFTGDSLAYNFGPTARWNVLSFGRVWGNIEFQRARWRE 369 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +Q+TVL A +EVENA+ S + +L AVE + + ++S + Y G Sbjct: 370 LVNNYQQTVLEASEEVENAMISYRFTQVRADQLYKAVEAAQGASAISEVQYEGGIIPFQT 429 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +R A +E A+ S V+LY A+G G+ Sbjct: 430 LLDAQRFQADLEDQYVAARGDTYTSLVNLYKALGGGW 466 >gi|310815785|ref|YP_003963749.1| Nodulation protein T [Ketogulonicigenium vulgare Y25] gi|308754520|gb|ADO42449.1| Nodulation protein T [Ketogulonicigenium vulgare Y25] Length = 454 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 129/447 (28%), Positives = 242/447 (54%), Gaps = 21/447 (4%) Query: 16 AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 A C VGP+ P +PT F G+ L + +W + D++L ++ L QNL Sbjct: 18 AACVAVGPDPQSTPAPAVPTTFVGGDGAALPAVAQTAFWADYRDSTLTAIITRGLSQNLD 77 Query: 75 ILQATERIN--AAKENILSVRADLFPSSYAS----ISHRFIPNLKTNSTGQLDSDWKIDL 128 +L A +RI+ A + A SS + S I + N T L + + DL Sbjct: 78 VLAANQRIDAARAAAAATGIMASQGSSSLGTQRTRTSGDGIATTEAN-TSTLSAAFVFDL 136 Query: 129 F-GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 F GQ R E++ A+L SA A +L ++++I +Y +AR+++E +++ + ++ Sbjct: 137 FGGQLRAREAASASLMSAEAGAQTTRLAWLAEVISAYGNARYYQEAMTLTRNTIATRERT 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +E++ K G + + ++EA + + +D+PT E +F + +++ LL PA + Sbjct: 197 VEVTRNKLNVGTATDFEVAQVEALLSASRADLPTQEAAFNAQIFSLAALLNEPAGPLMAQ 256 Query: 248 MQKQSNNFQPNLYIPI--NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 MQ+ ++ L +P +G+PADL+RNRPD+R E L ++A IG+A++ LYPSL+L Sbjct: 257 MQRGAS----MLRVPAAPRVGVPADLLRNRPDVRAAEHDLVAAMADIGVAEASLYPSLTL 312 Query: 306 NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 +G+ T +SFGP L LP+ ++G +++ + + A + W+ +V++A Sbjct: 313 SGTATATSGTDV------FSFGPSLSLPLLNQGTLRATRDQRIALADQAQTAWRASVVSA 366 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 I +V+ +++ ++ ++ L+ +V + ++ L+ N+ +G +LLD+L+++R+ A Sbjct: 367 IADVQTQNSNLQRYRQQLSALEASVAAYDRAFELAQRNFEEGSLALLDLLEVDRSLASAR 426 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ A+ A+S+ L IAIG+G NP Sbjct: 427 LSLAAARNTAAQSWASLNIAIGAGANP 453 >gi|256829692|ref|YP_003158420.1| NodT family RND efflux system outer membrane lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256578868|gb|ACU90004.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfomicrobium baculatum DSM 4028] Length = 531 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 242/478 (50%), Gaps = 34/478 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKL 64 AIFSL + ++AGC VGP+Y +P P + ++ + WW+ ND L++L Sbjct: 16 AIFSLALAVIAGCAVGPDYVRPQAPQMQEWLEKDDAGLKHGPAELAAWWKRLNDPVLDRL 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSY---ASISHRFIPNLKTNSTGQ-- 119 V +A ++N ++ A RI ++ + + FP S+S + N+T Sbjct: 76 VALAAERNPSLHVAALRILESRARLGIATGNQFPQLQQLQGSVSDTGLSRHNANTTPAID 135 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD+ W++D +G+ RR +ES ++D+A A D + + +++ Y+ R Sbjct: 136 RYYATASVALDAAWELDFWGRFRRAVESGAWSVDAAMAGYDDLLVTLTAEVARVYVTLRT 195 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++R+ IAH+ + L +++++++ + G ++L + + A + ++ IP LE R + Sbjct: 196 LEQRLFIAHENVALQERSLQIARVLHQGGDVTELDVTQAAALLAGTQASIPRLEAQLRQS 255 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LLG E + P + + +G+PA+L+R RPDIR E ++A Sbjct: 256 KNGLSALLGMLPGEADRILGGPGPV--PQVPSEVAVGVPAELLRRRPDIRLAEAQMAAQC 313 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN---SFPGY-------------NTHWSFGPKLYLP 333 A IG+A++DLYP SL G+I L+ N +F GY + +S G Sbjct: 314 ALIGVAQADLYPRFSLFGTIGLSASNAALTFAGYPGGSSLGDLWSGESLQYSGGLGFGWD 373 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G+I +N+R ++ Q+ ++ VL A +E E+ALT+ + ++ V L+ V Sbjct: 374 IFNYGRITNNVRVQDARFQQLVEQYKNIVLTAARETEDALTAFSRSREEVAFLEQGVAAA 433 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S+ +SMI YR+G +LD +R+ +V+ L+ + + + + Y A+G G+ Sbjct: 434 TRSVEISMIQYREGLADFQRVLDTQRSKVQVQDQLTATQGSVLTNLIATYKALGGGWE 491 >gi|83956107|ref|ZP_00964589.1| hypothetical protein NAS141_02901 [Sulfitobacter sp. NAS-14.1] gi|83839673|gb|EAP78852.1| hypothetical protein NAS141_02901 [Sulfitobacter sp. NAS-14.1] Length = 435 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 138/440 (31%), Positives = 233/440 (52%), Gaps = 17/440 (3%) Query: 18 CT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 CT VGP+YT P PL T F IG L + +WW+ ND +N+LV L QN+ I Sbjct: 4 CTAVGPDYTPPKTPL-ETSF-IGGGGALEEVARDEWWKRLNDRQMNRLVDRGLTQNIDIA 61 Query: 77 QATERINAAKENILSV-RADLFPSSYASISHRFIPNL---KTNSTGQLDSDWKIDLFGQ- 131 A +RI AA ++ A F + + R N + + +++ +D+FG Sbjct: 62 TALQRIKAANTDLRQTGTAGQFSGGLDAQAQRNNGNPISGDPSESATFGANYILDIFGGV 121 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 RR + + A +++A +L ++S ++ +YIDAR+F+E +++ Q + ++ L Sbjct: 122 RRDAQRAAAGVEAAKFDAGTVRLALVSGVVSNYIDARYFQEALALTRQNIASLRRTQSLI 181 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 + QGA S+L L + ++ + +D+P LE +F V I+TLL PA L M Sbjct: 182 RAQVEQGALSELDLARSAGQLDTAIADLPPLEAAFEARVFAIATLLAEPAQPLLKQMI-- 239 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + QP + G+PA+L+RNRPD+ E++LA +VA +G+A++ LYPS++L+GS+ Sbjct: 240 AGAPQPYPRSKGSTGVPANLLRNRPDVLAAERRLAAAVAGVGVAEAKLYPSVTLSGSVTA 299 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + + WSFGP L LPI ++G +++ A SA + W+ VL A+++V+ Sbjct: 300 ANP-------SEWSFGPALSLPILNQGPLRARRDAAIISATTAELEWRAQVLAAVEDVQK 352 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 + ++ V L+ A +++ LS + +G +L D+LD ER + L+ A Sbjct: 353 TQSEFTRKQREVAALRAAQRSRDRTLQLSRKVFERGELNLPDLLDAERFANAARISLAAA 412 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 R LA+S+ L +A G G+ Sbjct: 413 VRDLAQSWSALMVATGRGWG 432 >gi|240851282|ref|YP_002972685.1| putative outer membrane efflux protein [Bartonella grahamii as4aup] gi|240268405|gb|ACS51993.1| putative outer membrane efflux protein [Bartonella grahamii as4aup] Length = 493 Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/449 (28%), Positives = 232/449 (51%), Gaps = 18/449 (4%) Query: 17 GCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC VGP Y K +P + + S + + + WW ND L+ L+ A+ N Sbjct: 26 GCMVGPNYQKTSFRVPAVWGEKSAQTAGQPVAL--AGWWRRLNDPVLDALMDYAISGNNN 83 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-----TGQLDSDWKIDLF 129 + A R+ A+ + V L P+ SIS + ++++ D+ W++D F Sbjct: 84 VAVAKARVREARAGLGQVVGTLLPNVSNSISGTRSHSGQSDALLNQYRSGFDASWELDFF 143 Query: 130 G-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G +R +E++ LD+A + + ++ + +Y+ R +++++ I QI +K Sbjct: 144 GGHKRAVEAARYGLDAAVEDMRATMVTLLGDVATNYVQMRGWQQKLLIVRQIAVSQRKTY 203 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 EL + T G S+L + +A++ + E+DI +E + M+VH +S L G T + Sbjct: 204 ELMRARLTAGDVSELDVSNAQAQMANTEADISQMEANLAMSVHRLSVLTGCVPTALKDLL 263 Query: 249 QKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 QK + + + P PI GIPAD++ RPD+R E++ A + A+IG ++D YPSL+L G Sbjct: 264 QKNAKHAKIPQPRWPIPAGIPADILLTRPDLRRAERQYAQATARIGQREADRYPSLTLTG 323 Query: 308 SI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 +I A D + WSFGP L P F+ G+++++I A + + +IT++ VL Sbjct: 324 NISTAATAIDQLWKNSTIGWSFGPGLRFPFFNGGQVEASIAVARAQRDQAFITYRAAVLG 383 Query: 365 AIKEVENALTSINEDKKIVTKL--QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A+++VENAL + ++ + + KL + LH S+ LS + G S L++L+ +R+ Sbjct: 384 ALEDVENALVRLTKEYQRLEKLIIVNKASLH--SLKLSRSLFENGNTSFLELLNADRSYY 441 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L ++ L Y+ L A+G G++ Sbjct: 442 SAQMALKDSRVSLVTQYITLMKALGGGWD 470 >gi|116751340|ref|YP_848027.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] gi|116700404|gb|ABK19592.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] Length = 569 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 251/481 (52%), Gaps = 32/481 (6%) Query: 1 MNILRAIFSLFIVL-LAGCT-VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFN 57 M + A+ L L AGCT VGP++ KP P+ NSK + D +WW F Sbjct: 36 MRCVSALMLLAATLGAAGCTAVGPDFAKPSAPVAANWSEKDNSKVKTESGDYSQWWTVFE 95 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLK--T 114 D LN L++IA + N + A RI A+ + + FP + ++ + N + Sbjct: 96 DEVLNNLIRIAYENNPDLQVAGLRILEARAQLGIALGNQFPQKQQGNAAYTYTRNSENAA 155 Query: 115 NSTGQ-----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 N+ G +D+ W+ID +G+ +R IES+ A+L ++ A D A +++ + Sbjct: 156 NTAGGGDLRYGAYNYGIDASWEIDFWGKYKRGIESADASLTASVADYDSALVSLAGNVAS 215 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R ++ER+ +A + +++ K+++ L+ +++ GA ++L + + + ++ IP+L Sbjct: 216 TYVQIRTYEERLKVARENVEIQKESLRLTEVRYRNGAVTELDVQQARTLLYDTQAQIPSL 275 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E S + + ++++ LLG P + + + P + +GIPA+L+R RPDIR E Sbjct: 276 EISLQQSRNSLAVLLGMPPGDLAGLLGDKPGTI-PTPPAEVVLGIPAELLRRRPDIRSAE 334 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL---------THDNSFPGYNTHWSF----GPK 329 + A A+IG+AK++L+P +SL GS T + F T S+ GP Sbjct: 335 LQAAAQCAQIGVAKAELFPRISLLGSFGFLASDSRLTRTGGSGFTDLFTWSSYTMTTGPT 394 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + PI + G+I +N+R ++ ++ +T++ TVL A KEVE+AL + L+ + Sbjct: 395 IEWPILNYGRITNNVRVQDARFEQLMVTYRNTVLGAAKEVEDALVGFLRSQDKTALLEES 454 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ K+++ L+M+ YR+G +L+ +++ + + L+ ++ + + V LY +G G Sbjct: 455 VKAAKRAVDLAMLQYREGAVDFTTVLNSQQSLVQEQDSLTQSRGAVPTNLVALYKGLGGG 514 Query: 450 Y 450 + Sbjct: 515 W 515 >gi|327393269|dbj|BAK10691.1| Nodulation protein T precursor NodT [Pantoea ananatis AJ13355] Length = 508 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 133/476 (27%), Positives = 241/476 (50%), Gaps = 38/476 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLV 65 + + L GC+VGP+Y P P LP + +S+ T +WW +F D L+ L+ Sbjct: 15 MLLFALTGCSVGPDYQAPK-PQLPGSYHALDSQETSRPQTSAVDSRWWRNFGDPQLDSLI 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---LKTNSTGQL 120 A++ NL++ QA RI A+E + + LFPS A ++ + + LK N QL Sbjct: 74 ARAIEGNLSLQQAVLRIAGAREQLSQAQGGLFPSLNGSAKVTRQQLGLEGLLKANGADQL 133 Query: 121 DSD----------------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 DS+ W++DL+G+ RR IES+ A +A Q + A +++ Sbjct: 134 DSNVASQLNGLTQPVTLYQGSFDASWELDLWGKVRRQIESANAQQQAAIEQRNDALVSLE 193 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++++ +++ R + + Q + + + +L+ + G ++ A++ S+++ Sbjct: 194 AEVVRAWLQLRGAQATVKTLQQQIAVADQTWQLTESQQRNGLAPVTNVENARAQLSSLQA 253 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P + R ++ ++ LLG + + P L +++GIP+ L R RPD Sbjct: 254 QLPQYQAQTRQAMNGLAVLLGKTPGALDAELSE--PKALPALPAFVSVGIPSTLARRRPD 311 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKLYLPI 334 IR E L A+IG++ + L+PSLSL G + + T + +++H +S GP L +PI Sbjct: 312 IRQAEATLHAQTAEIGVSVAQLFPSLSLTGQLGVRNTDVSYLDNWSSHFYSVGPSLSIPI 371 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G++ S++R A + + +++TVL A+++VENAL S D++ VT L + Sbjct: 372 FQGGRLVSSVRLARAQQASAALNYRQTVLTALQDVENALVSYRADQQRVTALDETTGALQ 431 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ +YRQG + L++LD +R A+ + A+ Q V LY A+G G+ Sbjct: 432 RTFDLASDSYRQGLSTFLEVLDAQRQLAQAREQATQARMQSGLDLVALYKALGGGW 487 >gi|119385668|ref|YP_916723.1| RND efflux system outer membrane lipoprotein [Paracoccus denitrificans PD1222] gi|119376263|gb|ABL71027.1| RND efflux system, outer membrane lipoprotein, NodT family [Paracoccus denitrificans PD1222] Length = 482 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 121/404 (29%), Positives = 214/404 (52%), Gaps = 7/404 (1%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW +F D L+ L+ L +NL + A I A+ N V A P + A+ +R Sbjct: 55 WWAAFRDKRLDGLIAAGLNRNLDVQTAVATIREAQANARLVGASDLPQVEAQGAAARNRS 114 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + +S+ L W +DLFGQ R + + A LD+AY ++A+L V S + +Y+DA Sbjct: 115 ETGIVESSSATLGVSWLVDLFGQNRAARQGASARLDAAYLSAEVARLTVASAIASAYVDA 174 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R+++E +++ Q L K+ +E++ + G+ S+L +++ E + E+ +P LE F Sbjct: 175 RYYQEALALTRQSLTSRKRTLEMTRTQDAFGSVSRLEVLQAEQLVAQAEAALPGLEVGFD 234 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +V+ ++TL + + +++ QP ++G+PAD++R RPD+R E+ LA Sbjct: 235 QSVNRLATLTAGRSADLAAQLRQ--GGGQPRARYSASVGVPADVVRVRPDVRMAERNLAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + A +G A++ YP L+L+GSI T+ + P++ LP+F G ++ + A Sbjct: 293 AAADVGEAQAAFYPRLTLSGSITPTNIGGGGSSKSWGFG-PQISLPLFSGGANQAQLSAA 351 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ A++ + WQ +VL A++EVENAL N D + V VE +++++L+ +Y G Sbjct: 352 QARAEQARLAWQASVLGAVEEVENALAGYNRDARAVAAQSRLVENARETVNLTRSSYELG 411 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER+ +L+ A RQ A ++V L A G Sbjct: 412 EADFFPVLDAERSLLSARQELAAAVRQQALNFVALSAASAGGVG 455 >gi|116750235|ref|YP_846922.1| RND efflux system outer membrane lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116699299|gb|ABK18487.1| RND efflux system, outer membrane lipoprotein, NodT family [Syntrophobacter fumaroxidans MPOB] Length = 497 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 136/473 (28%), Positives = 238/473 (50%), Gaps = 43/473 (9%) Query: 14 LLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNKLV 65 LLAGC VGP++ +P P T + G ++ ++ T + WW++F+D L L+ Sbjct: 28 LLAGCMVGPDFHRPKSDPPGAYTGVTAGATRE-PSVTTGEPARLIDWWKAFDDPVLTSLI 86 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL----- 120 + A+ NL + QA RI A+ + LFP A S+ N S G + Sbjct: 87 ERAITANLDVRQAQARIRQARATRGVAASGLFPEIDAGASY----NYSRGSPGTVSSSGG 142 Query: 121 -------------------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 D+ W++D FG RR+IE+S A+L +A +++ +++ Sbjct: 143 GTTAAGAAATPRELFQVGFDASWELDFFGGTRRNIEASDADLKAAVEDRRDVLVSMAAEV 202 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ R + ++ IA + L K ++ ++ G S L + +A+ + E+ IP Sbjct: 203 GTEYVTLRGLQAQLLIARKNLASQKHTAGITRKRWQAGFVSALDVANADAQASTTEAQIP 262 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE S R ++++ LL P L + + P + + +G+P+DLIR RPDIR Sbjct: 263 ILESSIRATIYSLGLLLAQPPAALLDELS--DDGPIPPIPPEVPVGLPSDLIRRRPDIRR 320 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGY-NTHWSFGPKLYLPIFDK 337 E ++ + A+IG+A +DL+P +L GS+ L N+ N WS GP + PIF Sbjct: 321 TEAQVHAATARIGVATADLFPKFALTGSMGLMSADLNTLANLSNRFWSLGPTVSWPIFTA 380 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I+ NI + ++ + + +T+L A+K+VE ALT+ ++++ L AV ++K++ Sbjct: 381 GRIQCNIEVQNAVQEQTLLAYDKTILTALKDVETALTAYAKEQEHNRSLTEAVAHNRKAV 440 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LSM Y G+ L++L+ +R+ E L+++ R L + + LY A+G G+ Sbjct: 441 DLSMRLYLVGKIDFLNVLNAQRSLYLTEEGLALSNRTLTTNLIALYKALGGGW 493 >gi|254510865|ref|ZP_05122932.1| outer membrane efflux protein [Rhodobacteraceae bacterium KLH11] gi|221534576|gb|EEE37564.1| outer membrane efflux protein [Rhodobacteraceae bacterium KLH11] Length = 519 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 135/469 (28%), Positives = 244/469 (52%), Gaps = 35/469 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLL--------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 VL A VGP++ +P+ P++ P+ G + + ++WWE+FND +LNKL Sbjct: 18 VLTACAPVGPDFVRPNSPVVKQWIEVNSPSAGQSGLTSR--SAPVVRWWETFNDPTLNKL 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYA--------SIS---------HR 107 + A QNLT+ A R+ A+ + +L+P S A IS R Sbjct: 76 IAEAYAQNLTLQVAGARVLQARAQLGIAFGELYPQSQAIGGSLERRQISDNLGPIADVRR 135 Query: 108 FIPNLKTNSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 IP ST Q+ D+ W++DL+GQ RR ++++ +NL A D A + + + Y Sbjct: 136 IIPLDTEFSTSQVGFDAQWELDLWGQQRRGVQAARSNLALQVANYDDALVTLTGDVAALY 195 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I+ R +E +S+A + +D+ + + +L+ L+F G T++L + + A + + ++ +P LE Sbjct: 196 INIRSLQEALSVARENIDIQQVSADLTQLRFNNGVTTELDVQESTALLNNTKALVPQLES 255 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + ++ LLG ++ + P I +G+PA+L+R RPD+R E Sbjct: 256 DLAQAQNALAVLLGKTPSQMAGLLGNSGRI--PAARSNIAVGVPAELLRRRPDVRAAELA 313 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIK 341 A A++GIA +DLYP L+GSI L ++++ + G + + + G+IK Sbjct: 314 AATQSAQVGIALADLYPQFILSGSIGLQASGGRDLFSSNSTTGLASAGVVWNVLNYGRIK 373 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+R +++ Q +Q TVL A EVE+A+ + + +K VT Q +VE +K+ +++ Sbjct: 374 NNVRAQDAAYQALIANYQNTVLTAYSEVESAMVAYAQARKQVTFYQRSVEASRKAADIAV 433 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S IL+ + A + + +L A+++++ + V +Y +G G+ Sbjct: 434 DQYRDGIASYSRILNTQTALLRSQANLIEARQEVSSNLVAIYKGLGGGW 482 >gi|301057385|ref|ZP_07198502.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] gi|300448528|gb|EFK12176.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] Length = 514 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 136/472 (28%), Positives = 240/472 (50%), Gaps = 37/472 (7%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFN 57 L+A+F + LLA C VGP+Y P P P Q+ L+ D WW +F+ Sbjct: 9 LKALF--LMTLLAACAPVGPDYVPPE-PDAPKQWDTPLKGGLVEKDNDNNALSTWWNAFD 65 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFI 109 D L LV+ A+ NL + A R+ A+ A L P+ + S R+ Sbjct: 66 DPLLTDLVERAVSGNLDLKSARSRVREARAGRGISEAGLVPAVDVAASATRNRLSEDRYG 125 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + D+ W+ID+FG RR +E++ A+L++ + ++++S++ +Y+D R Sbjct: 126 GDEYNLYSAGFDAGWEIDVFGGIRRSVEAATADLEAEEETLRDVMVSLLSEVALNYLDVR 185 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + I +A L+ +++ L+ ++ G T++LS+ + ++S S IP L + Sbjct: 186 TIQLGIEVAVHNLEAQERSYRLALSRYEAGLTNELSVQQARYNMESTRSQIPLLRTALAA 245 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-------NIGIPADLIRNRPDIRYQ 281 ++ +S LLG +Q + N Q + PI ++G+PA+ +RNRPDIR Sbjct: 246 AMNRLSVLLG---------LQPGALNGQLKEHAPIPVPPLKVSVGVPAEALRNRPDIRRA 296 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKG 338 E++LA A++G A +DLYP SL GSI L + + F + GP + P+FD G Sbjct: 297 ERQLAAQTARVGTATADLYPKFSLVGSIGLETLSLGDVFSASGLAYLIGPSVTWPVFDAG 356 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 I+SNI+ ++ I ++ +L A++EVENAL + +++ + L+ + + ++++S Sbjct: 357 AIRSNIQVQTERQKQALIQYEYAILAALEEVENALVAYADEQNRMKALEASTDAAERAVS 416 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS YR G +LD +R+ + L+ +K + + V LY A+G G+ Sbjct: 417 LSQSQYRAGLTDFTSVLDAQRSLLSFQEQLAQSKGNVTSNLVRLYKALGGGW 468 >gi|78355447|ref|YP_386896.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217852|gb|ABB37201.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 494 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 142/478 (29%), Positives = 242/478 (50%), Gaps = 41/478 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTL--KWWESFN 57 N L A L IV GC VGP+YT P + P + + N T +WW+ Sbjct: 13 NGLLASALLTIVFAGGCAVGPDYTAPELDSPAAWRTEDVSGLRQTRNATTALSQWWKVLE 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D L+ L++ A+ NL + +A R+ AA+ + ADL+P+ AS S ST Sbjct: 73 DPMLDSLMQRAVTGNLDLKEARARVRAARARLGISEADLYPTLDASGSL---------ST 123 Query: 118 GQ------------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 GQ D+ W+ID+FG RR +E++ A L+++ A + +++++ Sbjct: 124 GQQSENAGYDGKERDLYKAGFDAGWEIDIFGGTRRAVEAAGAELEASEADLRDVYVSMLA 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+D R ++ R+S+A L+ K+ E+ ++ G + L + + ++S ++ Sbjct: 184 EIASTYVDVRTYQTRLSVAQANLEEQKETYEIVASRYDSGLSDALGVQQARYSLESTRAE 243 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP L+ ++ ++ LLG P T + ++ P + + +GIPAD +RNRPD Sbjct: 244 IPALQSKLDAAINRLALLLGQQPDTLHAELITRRPIPMPP---VSVAVGIPADALRNRPD 300 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 IR E+ LA A++G+A ++LYP L GSI L + F + +SFGP + PI Sbjct: 301 IRMAERTLAARTAEVGVATAELYPKFRLVGSIGLESFAQSSLFESGSQVYSFGPGISWPI 360 Query: 335 FDKGKIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 F G I+ NI AE + QEQY+ +Q TVL A+ E + A+T +++ LQ A Sbjct: 361 FRAGAIRRNIDVAE-AVQEQYLHRYQHTVLAALNEAQTAMTDYAKEQNRRDALQAATLAA 419 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++ L+ Y G D+L+ R+ E L+++K + S V +Y ++G G+ Sbjct: 420 REALELAQDKYLNGLVDFSDVLEARRSLLSYEDQLAVSKGAVVDSLVRIYKSMGGGWQ 477 >gi|330987296|gb|EGH85399.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 465 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 137/464 (29%), Positives = 239/464 (51%), Gaps = 30/464 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTG------- 118 +L N + A R+ AA+ ++R D+ + I+ R +L K G Sbjct: 67 RSLDGNRDLRVAFARLKAAR----AIRDDVANDAMPVITSRASSDLGKGQQPGVTERRVN 122 Query: 119 ------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + Sbjct: 123 SERYDLGLDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQ 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + Sbjct: 183 LREAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRN 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+TLLG + S + P + + IG P ++RNRPDIR E++LA S A+ Sbjct: 243 RIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTAR 299 Query: 292 IGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A +DL+P +SLNG + T S G + WS GP + FD G +++ IR A+ Sbjct: 300 IGVATADLFPRVSLNGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRSAD 359 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 360 ADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGT 419 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 420 ADFLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|39935443|ref|NP_947719.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39649295|emb|CAE27815.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 509 Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 118/400 (29%), Positives = 203/400 (50%), Gaps = 31/400 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L V+L GC VGP+Y +P + P Q+S +WW D +L++LV A+ Sbjct: 80 LVAVMLGGCAVGPDYRRPLL-ATPAQWSRAGVATPAPPVLPRWWTRLRDPTLDRLVVEAV 138 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------------PNLKTNST 117 NL + A+ R+ A+ + L P+ + S R PNL S+ Sbjct: 139 DGNLDVATASARVREARASYRQAVGALLPTIANTESARLAKGTGVASAAPGRPNLGGPSS 198 Query: 118 ------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 D+ W++DLFG RR +E++ +D++ + L ++ + SY Sbjct: 199 VVGSDGTSGLYQAGFDASWELDLFGANRRAVEAAAYGIDASDENLRAVLLTLVGDVASSY 258 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++AR ++ RI++A + + +++ + G S + L + + + IPTLE Sbjct: 259 VEARGYQARIALARRTATSQDETTKITRNRLAAGTGSAVDLATATGQAAATRAAIPTLET 318 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ VH +S L G P + + + P L P+ GIPAD++ RPD+R E++ Sbjct: 319 AYAQTVHRLSVLTGRPPSALSALLARPKPIPAPKL--PVPAGIPADVLLTRPDVRLAERR 376 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNT--HWSFGPKLYLPIFDKGKIK 341 A S A+IG A++ LYPS+SL G+IA + G N+ WS GP L +PIF+ GK++ Sbjct: 377 YAQSTARIGQAEAALYPSVSLAGNIATSGTKLGDLGRNSSISWSLGPTLTVPIFNGGKLR 436 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + + AE+ +Q++ +Q +VL A+K+VE+AL S++ + + Sbjct: 437 AAVEIAEAQRDQQFLAYQASVLTALKDVEDALVSLSNEHR 476 >gi|154246392|ref|YP_001417350.1| RND efflux system outer membrane lipoprotein [Xanthobacter autotrophicus Py2] gi|154160477|gb|ABS67693.1| RND efflux system, outer membrane lipoprotein, NodT family [Xanthobacter autotrophicus Py2] Length = 514 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 136/465 (29%), Positives = 229/465 (49%), Gaps = 22/465 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKL 64 A L ++L+GC VGP Y P + +P +S G ++ + +WW D L+ L Sbjct: 25 AAGPLAALVLSGCAVGPGYETPQL-AMPDHWSSGRGARAEVAPQLQRWWRRLGDGVLDGL 83 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----- 119 ++ A+ NL + A ++ AA+ LFP + S N +G Sbjct: 84 MEEAVAGNLDVATAKAKVRAARATYREQVGALFPQVTGNASATRGDNGGNVGSGGDVTVA 143 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD+ W+IDLFG RR +E++ D+A +D A + ++ + +YIDAR Sbjct: 144 STYGQYQAGLDASWEIDLFGANRRGVEAAAYGSDAAVDDLDAALVTLVGDVATNYIDARG 203 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ RI++A + ++ L+ K G S L + S E+DIP LE ++ + Sbjct: 204 YQARIALARRTASAQRETAALTRRKLDAGGASALDAANAAGQAASTEADIPELEAAYAQS 263 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 VH +S L G +++ P L P+ GIPA ++ RPD+R E++L S Sbjct: 264 VHRLSVLTGREPAALTGRLERPRAVPAPRL--PVPKGIPAQVLTARPDVRAAERRLGQST 321 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A +G A ++ YPS+SL G++ T + G + WSFGP L +PIF G++K+ Sbjct: 322 ALVGQATANRYPSISLAGTLNTTGTQLGDLARGSSISWSFGPTLTVPIFTGGQLKAAQEL 381 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+ + ++ ++ VL A+++VENA S+ + + +L + ++++ LS Y Sbjct: 382 AEAERDQSFLAYRAAVLTALEDVENASVSLGKQRLKAGRLAASAASYREAGRLSHALYGA 441 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S LD+L ER+ E L ++ +A YV L A+G G++ Sbjct: 442 GSSSFLDVLTAERSLYAAETALIESRVAVATYYVALNKALGGGWD 486 >gi|217976817|ref|YP_002360964.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] gi|217502193|gb|ACK49602.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] Length = 569 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 128/459 (27%), Positives = 239/459 (52%), Gaps = 26/459 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 C VGP++ P P+ P N + + D WW +F+D +L++L++IA QQNLT+L Sbjct: 51 CAVGPDFVPPGAPVAPKYLESRNKAVDSSRQDYRDWWRAFHDPALDRLIEIAYQQNLTLL 110 Query: 77 QATERINAAKENILSVRADLFP--------SSYASISHRFI---PNLKTNSTGQ----LD 121 A R+ A+ + +L+P ++Y SH P L+ N+ Q + Sbjct: 111 SAGTRVLQARAQLGVAIGELYPQQQQGLGLTTYNRPSHADAAANPQLQLNNFWQSQLGVR 170 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++D +G+ RR +ES+ A ++ A D + ++ + +YI R ++RI+IA Sbjct: 171 AAWELDFWGKFRRGVESADAAYLASIASYDEVLVTLLGDVARTYIGVRTLEKRIAIARAN 230 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + K+ ++++ +F GA++KL + + E + E+ +P L + + ++ + LLG Sbjct: 231 IVRQKEAVQVARDRFAGGASTKLDVYQAENVLGQTEASVPQLTQQLQQGLNALRVLLGL- 289 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E + + + S P I +GIPADL+R RPD+R E + A A+IG+A+++LY Sbjct: 290 TPEPIESLLRGSTGKIPVAPPKIFVGIPADLLRRRPDVRAAELQAAAQSAQIGVAQAELY 349 Query: 301 PSLSLNGSIALTHD--------NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 P+L+L G I + + F +SFGP I + G+I +N+R +++ Q Sbjct: 350 PALTLTGRIGGSASTINGAKLSSIFTPAGLAYSFGPSFQWNILNYGQITNNVRLQDATLQ 409 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +Q TVL A ++VEN ++ + + L+ +V ++ +S++ Y+QG Sbjct: 410 QYLVDYQNTVLKAQQDVENGISGYLQSRLATAALRRSVAAANGALGISLLEYQQGTRDFT 469 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L E+ + + DL+IA+ + + +Y A+G G+ Sbjct: 470 SVLTSEQNLLQAQNDLAIAEGDIPLAVTAVYAALGGGWQ 508 >gi|260434003|ref|ZP_05787974.1| outer membrane efflux protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417831|gb|EEX11090.1| outer membrane efflux protein [Silicibacter lacuscaerulensis ITI-1157] Length = 529 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 135/474 (28%), Positives = 249/474 (52%), Gaps = 35/474 (7%) Query: 9 SLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------KWWESFNDT 59 +L LL CT VGP++ +P+ P++ Q+ NS + L KWW+SFND Sbjct: 22 ALSAALLIACTPVGPDFVRPNSPVV-KQWMEANSPSASQTSGLTSRSAPVVKWWQSFNDP 80 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA--------SIS------ 105 +LNKLV A QNLT+ A R+ A+ + +L+P S A IS Sbjct: 81 TLNKLVAEAYAQNLTLQVAGARVLQARAQLGIAFGELYPQSQAVGGALEQRRISDNLGPI 140 Query: 106 ---HRFIPNLKTNSTGQL--DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 +R IP ST Q+ D+ W++D++G QRR ++++ +NL A D A + + Sbjct: 141 ADINRIIPLDTEFSTSQVGFDAQWELDVWGAQRRGVQAARSNLALQVANYDDALVTLTGD 200 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y++ R +E +++A + + L ++ +L+ L+F G T++L + + A + + ++ + Sbjct: 201 VAALYMNIRALQESLAVARENIKLQQEANDLTQLRFKNGVTTELDVQESTALLNNTKALV 260 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 PTLE + + ++ LLG + + ++ P + +G+PA+L+R RPD+R Sbjct: 261 PTLESDLQQAKNALAVLLGTTPSRMTGLLG--TSGRIPVARSNVAVGVPAELLRRRPDVR 318 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFD 336 E A A++GIA +DLYP L+GSI L ++++ + G + + + Sbjct: 319 AAELAAATQSAQVGIAMADLYPQFILSGSIGLQASGGRDLFSSNSTTGLASAGVVWNVLN 378 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+IK+N+R +++ Q +Q TVL A EVE+A+ + + +K VT Q + + +K+ Sbjct: 379 YGRIKNNVRAQDAAYQALIANYQNTVLTAYSEVESAMVAYAQARKQVTFYQRSADAARKA 438 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ Y+ G +L+ + A + +V+L A++Q++ + V +Y +G G+ Sbjct: 439 ADIAVSQYQDGIADYSRVLNTQTALLRAQVNLIEARQQVSSNLVAIYKGLGGGW 492 >gi|71736781|ref|YP_274480.1| outer membrane efflux protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557334|gb|AAZ36545.1| outer membrane efflux protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 465 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 144/476 (30%), Positives = 247/476 (51%), Gaps = 37/476 (7%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFN 57 M+ + F SL ++ LA C VGP+Y P +P Q + N +DT+ WW+ F Sbjct: 1 MSAFKLFFPSLLVMALAACAVGPDYKAPVT--VPAQLASAAQGNYDRSKVDTV-WWQQFE 57 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASIS 105 D +LNKLV +L N + A R+ AA+ +++ RA DL ++ Sbjct: 58 DPTLNKLVARSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVT 117 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 R + N + G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y Sbjct: 118 ERRV-NSERYDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAY 175 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIP 220 R + R +IA L KN + S TQ G ++L +V+ EA + ++E+ +P Sbjct: 176 GQLRGAQLREAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVP 231 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ + I+TLLG P + S + P + + IG P ++RNRPDIR Sbjct: 232 QLQAEQVRQRNRIATLLGERPGNLSVDL----SPSKLPAIAKALPIGDPTQVLRNRPDIR 287 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFD 336 E++LA S A+IG+A +DL+P +SL+G + T S G + WS GP + FD Sbjct: 288 AAERQLAASTARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFD 347 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + L + + + Sbjct: 348 LGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSA 407 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ + YR+G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 408 ARLASVQYREGTADFLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|282890149|ref|ZP_06298680.1| hypothetical protein pah_c013o060 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500000|gb|EFB42288.1| hypothetical protein pah_c013o060 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 475 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 148/478 (30%), Positives = 237/478 (49%), Gaps = 38/478 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFND 58 M +++A+F L V L GCTVGP+Y P M + PTQ+ + N +D WW+S ND Sbjct: 1 MKMIKALFFL-SVFLGGCTVGPKYEPPGMEM-PTQWHSTTEEGMNAEPLDCFLWWKSLND 58 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------------- 99 LN L++ A QNL + A RI A+ + A L+P Sbjct: 59 PLLNSLIEQASLQNLDVQIAISRILEARAAKKGISAQLYPHIDGTINYGHVQYNNKILKD 118 Query: 100 --SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 + I H N+ G D++W+IDLFG+ H + ++ A + S+ + +++ Sbjct: 119 ILGASCIDHHRKRNVNFFEIG-FDAEWEIDLFGKTTHELNAARAEIGSSIESLRDLMVSL 177 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +YI+ R + + IA + K+ L+ F G TS + + E ++ +E Sbjct: 178 TAEIAKNYIEIRGSQHLLDIAKSHIQTQKETTLLTTGLFEAGFTSIIDQWQTEEQLMLLE 237 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S+IP LE S +H +S LLG P E +++ + + Y P+ GIP+ L+RNRP Sbjct: 238 SEIPMLELSIEKGIHRLSILLGRPPAELFCVLREHHDLPELPHYKPL--GIPSALLRNRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTH--DNSFPGYNTHWSFGPKLYL 332 DIR E+ LA S K+G A +DL+P SL G I TH +SF W GP+L Sbjct: 296 DIRRAERNLAASTEKVGSAMADLFPRFSLRGFIGDVATHLSRSSFV-----WFAGPQLLA 350 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ I+ +I + Q+ +Q+TVL A++E EN + S + + + KL A++ Sbjct: 351 PIFNSKLIQQDIDLNKIKTQQALYQYQKTVLEALEETENTIASYHHELEHNRKLFSAMQF 410 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S + Y+ G L++L +R+ E +K QL Y+ LY A+G G+ Sbjct: 411 SGESYNQLFHLYQTGFKGYLEVLVSQRSLLSTENAFLKSKIQLLMHYISLYKALGGGW 468 >gi|330890399|gb|EGH23060.1| outer membrane efflux protein [Pseudomonas syringae pv. mori str. 301020] Length = 465 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 240/462 (51%), Gaps = 26/462 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 +L ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 TLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRSKVDTV-WWQQFEDPNLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASISHRFIPNLKT 114 +L N + A R+ AA+ +++ RA DL ++ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVTERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S N P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPNKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 302 VAPADLFPRVSLSGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRSADAD 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 362 AEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTAD 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 422 FLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|331010986|gb|EGH91042.1| outer membrane efflux protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 465 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 141/466 (30%), Positives = 241/466 (51%), Gaps = 34/466 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASISHRFIPNLKT 114 +L N + A R+ AA+ +++ RA DL ++ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVTERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +IA L KN + S TQ G ++L +V+ EA + ++E+ +P L+ Sbjct: 185 EAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQ 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I+TLLG + S + P + + IG P ++RNRPDIR E++LA S Sbjct: 241 RNRIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAAST 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +DL+P +SL+G + T S G + WS GP + FD G +++ IR Sbjct: 298 ARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRS 357 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+ Sbjct: 358 ADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYRE 417 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 418 GTADFLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|289646316|ref|ZP_06477659.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330869642|gb|EGH04351.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 465 Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 240/462 (51%), Gaps = 26/462 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASISHRFIPNLKT 114 +L N + A R+ AA+ +++ RA DL ++ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVTERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 302 VATADLFPRVSLSGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRSADAD 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 362 AEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTAD 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 422 FLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|49474725|ref|YP_032767.1| hypothetical protein BQ12400 [Bartonella quintana str. Toulouse] gi|49240229|emb|CAF26699.1| hypothetical protein BQ12400 [Bartonella quintana str. Toulouse] Length = 494 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 128/454 (28%), Positives = 229/454 (50%), Gaps = 14/454 (3%) Query: 10 LFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 L +L+GC VGP Y K +P + Q S +++ + + WW +D LN L+ Sbjct: 20 LCFFILSGCMVGPNYHKTFFRVPAVWGQKSAQIAEHPVAL--AGWWWRLDDPVLNVLINY 77 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTGQ----LDS 122 A+ N ++ A R+ A+ + L P+ SIS R S Q D+ Sbjct: 78 AISGNNSVAVAKARVREARAGLGQAVGFLLPNVSNSISGIRSASGQSDASLSQYRSGFDA 137 Query: 123 DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D FG +R +E+S ++ + + ++ + +Y+ R +++++ I QI Sbjct: 138 SWELDFFGGHKRAVEASHYGFEATVEDMRATMVTLLGDVATNYVQMRGWQQKLLIVQQIA 197 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 +K EL + G S+L + +A++ + E+DI +E + M++H +S L G Sbjct: 198 LSQRKTYELMCARLKAGDVSELDVSNSQAQMANTEADISQMEANLEMSIHRLSVLTGRVP 257 Query: 242 TEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 T +QK + + P PI GIPAD++ RPD+R E++ A + A+IG ++D Y Sbjct: 258 TALKDLLQKNAKQAKIPQPKWPIAAGIPADILLTRPDLRRAERQYAQATARIGQREADRY 317 Query: 301 PSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PSL+L G+I A D + WSFGP L P F+ G+I +++ A + + +IT Sbjct: 318 PSLTLTGTISTAATAIDQLWKNSTIGWSFGPGLRFPFFNGGQIVASVAVARAQRDQAFIT 377 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ VL A+++VENAL + + + + KL A + S+ L+ + G S L++L+ Sbjct: 378 YRAAVLGALEDVENALVKLKNEHQRLEKLIVANKASLHSLQLARRLFENGNTSFLELLNA 437 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ ++ L ++ L Y+ L A+G G++ Sbjct: 438 DRSYYSAQMALKDSRVSLVIQYIALMKALGGGWD 471 >gi|298486818|ref|ZP_07004874.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158685|gb|EFH99749.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 465 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 240/462 (51%), Gaps = 26/462 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRGKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASISHRFIPNLKT 114 +L N + A R+ AA+ +++ RA DL ++ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVTERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 302 VATADLFPRVSLSGFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRSADAD 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 362 AEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTAD 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 422 FLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|330959921|gb|EGH60181.1| RND efflux system outer membrane lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 469 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 129/471 (27%), Positives = 235/471 (49%), Gaps = 32/471 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT--QFSIGNSKNLINIDTLKWWESFNDTSLN 62 R + + + L C+VGP++ P P LP Q +I L +WW+ D+ L Sbjct: 3 RTLLFMALACLGACSVGPDFHAPR-PELPETWQANIQPGSTLTGKADSQWWQQLGDSQLT 61 Query: 63 KLVKIALQQNLTILQATERINAAK--------ENILSVRADLFPSSYASISHRFIPNLKT 114 LV+ A + N + A+ R+ ++ E + V A+ +Y + + NL Sbjct: 62 TLVERAAKANFDVRMASNRLEQSRLMRQVTGSEQLPGVSAN---GAYKRARNSSVGNLDE 118 Query: 115 NS----------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + +G +D+ W++DL+G RR+IE++ A + AQ D L++ ++ + Sbjct: 119 SGLEGQAPFELWSGAIDASWELDLWGHVRRNIEAADAEVALTQAQRDGVLLSIAAETASN 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + R+ +A Q L++ +++ +L+ +F G T+ L A++ +IE+ +P L Sbjct: 179 YIRLRGVQARLGVARQNLEIARQSYQLTKTRFDNGVTTNLDTANSAAQVATIEAQLPVLG 238 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ +S L+G P ++ ++ PN + +G+P++L + RPDI+ E Sbjct: 239 AQQDRLINVLSLLMGEAPRALRADLIEPKAI---PNPAPDVPVGLPSELAQRRPDIQQSE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 L + A IG+A++D YP +SL SI + +SF + + WS+GP LYLP+F G+ Sbjct: 296 AALHRATAAIGVAQADFYPRISLGASIGSQALNGSSFGDWGSRMWSYGPSLYLPVFQGGR 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + + QE I +Q VLNA EV+NA+T + +++ L AV + ++S Sbjct: 356 LTGTLELRKRQEQEAAIDYQRVVLNAWHEVDNAMTDYSAEQQHHIALAEAVRQNMIALST 415 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y QG +++L ++RA + +L + Q A V LY +G + Sbjct: 416 ARDRYSQGAADFINVLGVQRALLATQSELVDSATQAALDRVQLYRVLGGSW 466 >gi|153010881|ref|YP_001372095.1| RND efflux system outer membrane lipoprotein [Ochrobactrum anthropi ATCC 49188] gi|151562769|gb|ABS16266.1| RND efflux system, outer membrane lipoprotein, NodT family [Ochrobactrum anthropi ATCC 49188] Length = 493 Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 135/457 (29%), Positives = 236/457 (51%), Gaps = 20/457 (4%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + + LLA C TVGP+Y KP++ L P ++ K + WW++ D L++L+ Sbjct: 10 VLGSILPLLAACVTVGPDYQKPNV-LTPAGWNSKADKRAPQLG--DWWKNLKDPVLDQLI 66 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----LD 121 + + + A ++ + N S L+P S S + T ++ Q Sbjct: 67 ADGIAGSPDVATAKAKVRQTRANYTSAGGALYPQLDGSGSFTRSDSGTTLASNQSSMGFK 126 Query: 122 SDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLF G RR +E++ N++SA Q+ A + +I + +Y + R + I+IA + Sbjct: 127 TQWELDLFGGNRRGVEAAYYNVESANEQLRAALITLIGDIATNYANLRGAQANIAIAQRN 186 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ + L+ + G S++ L+ E + S E+ IP L S+ ++ +S L G Sbjct: 187 AASQRQTVALTRSQLEAGQISQVDLLSAETQAASTEAQIPGLRISYAQYLNQLSVLTGRS 246 Query: 241 ATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ + K +P IP I+ G+PADL+ +RPDIR E+ A S A IG ++ Sbjct: 247 SSALASVLDKS----RPIPAIPRKISAGLPADLLLSRPDIRAAERDYASSTASIGQKQAL 302 Query: 299 LYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 LYPS+SL G+I T +F W+FGP L +P+F G++ +++ A ++ + Sbjct: 303 LYPSVSLTGNIN-TGGANFGDLGKLSTISWAFGPSLSVPVFHGGQLNADVDAARAARDQA 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +I +++ +L A+ EVENA S+N+++ +LQ V +K L++ YR G S +D+ Sbjct: 362 FIAYRKIILTALSEVENASVSLNQNRLRTAQLQKIVGNSRKINELTLEQYRAGTKSFVDV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +R E +LS A+ L +YV L A+G G+N Sbjct: 422 LTAQRDLLSAETNLSQARTDLVLNYVALQKALGGGWN 458 >gi|329295867|ref|ZP_08253203.1| RND efflux system outer membrane lipoprotein [Plautia stali symbiont] Length = 511 Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 137/475 (28%), Positives = 243/475 (51%), Gaps = 49/475 (10%) Query: 17 GCTVGPEYTKP--HMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y P H P LP+Q + SK L + WW+SFND L+ L++ A+ Sbjct: 28 GCAVGPDYQPPQAHTPGSYRDLPSQEA---SKPLASATNPSWWKSFNDPQLDSLIERAIA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP------------------ 110 NLT+ Q+ RI A+E + R LFPS A ++ + + Sbjct: 85 GNLTLQQSVLRIAGAREQLAQARGGLFPSLNGSAKVTRQQLGLKGMLKSYGVYDQVDDDV 144 Query: 111 ----NLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 N T+S G D+ W++DL+G+ RR +E + A +A Q + A +++ +++ Sbjct: 145 ADQLNGLTHSVTLYQGSFDASWELDLWGKVRRQMEMADAQQQAAIEQRNDALVSLEAEVA 204 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R + ++ Q +++ ++ EL + G + A++ S+ + +P Sbjct: 205 RTYLQLRGAQAVLATLQQQINVAQQTWELMQSQQRNGLAPLTDVENARAQLASLNAQLPP 264 Query: 222 LEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + R ++ ++ LLG P + M ++ P L + +GIP+ L R RPDIR Sbjct: 265 YQAQERQAMNGLAVLLGKTPGSLDNELMSSKALPALPKL---VAVGIPSTLARRRPDIRQ 321 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTHW-SFGPKLYLPIFDK 337 E L A IG++ ++L+PSLSL G + + + ++ +++H+ S GP L +PIF Sbjct: 322 AEANLHAQTANIGVSVANLFPSLSLTGQLGVRNTDASYLDDWSSHFFSIGPALSIPIFQG 381 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++ S+++ A + + +++TVL A+++VENAL S D++ VT L +++ Sbjct: 382 GRLVSSVKLARAQQASAALDYRQTVLTALQDVENALVSYRADQQQVTVLDETTGALQRAF 441 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ +Y+QG + L++LD +R A+ + A+ Q A V LY A+G G+ P Sbjct: 442 DLASDSYKQGISTFLEVLDAQRQLAQS----TQARMQSALDLVALYKALGGGWEP 492 >gi|239833861|ref|ZP_04682189.1| RND efflux system, outer membrane lipoprotein, NodT family [Ochrobactrum intermedium LMG 3301] gi|239821924|gb|EEQ93493.1| RND efflux system, outer membrane lipoprotein, NodT family [Ochrobactrum intermedium LMG 3301] Length = 545 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 133/458 (29%), Positives = 238/458 (51%), Gaps = 22/458 (4%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKL 64 + + +LA C TVGP+Y P++ + P + NS+ I L WW+ D L++L Sbjct: 62 VLGSILPMLAACVTVGPDYQTPNV-VTPAGW---NSRADSRIPQLGDWWKKLKDPVLDQL 117 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----L 120 + + + + A ++ A+ N S L+P S++ T +T Q Sbjct: 118 IADGIAGSPDVATAKAKVRQARANYTSAGGALYPKLDGDGSYKRSDTPATFATNQSSMGF 177 Query: 121 DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++ W++DLFG +R +E++ N++SA Q+ A + +I + +Y R + I+IA + Sbjct: 178 NTTWELDLFGGNKRGVEAAYYNVESANEQLRAALVTLIGDIATNYARLRGAQADIAIAQR 237 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ + L+ + G S++ L+ E + ES +P L ++ ++ +S L G Sbjct: 238 NAASQRQTVALTRSQLEAGQISQVDLLNAETQASRTESQVPGLRINYAQYLNQLSVLTGR 297 Query: 240 PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 ++ + K +P IP I+ G+PADL+ +RPD+R E+ A S A +G ++ Sbjct: 298 SSSSLASVLDKP----RPVPAIPGKISAGLPADLLLSRPDVRAAERDYASSNASVGQKQA 353 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 LYPS+SL G+I T +F W+FGP L +PIF G++ +++ A ++ + Sbjct: 354 LLYPSVSLTGAIN-TGGANFGDLGKLSTISWNFGPSLTVPIFQGGRLSADVDAARAARDQ 412 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +I +++ +L A+ EVENA S+N+++ V +LQ V +K L++ YR G S +D Sbjct: 413 SFIAYRKVILTALSEVENASVSLNQNRLRVAQLQKIVSNSRKINELTLEQYRAGTKSFVD 472 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R E +LS A+ +L +YV L A+G G+N Sbjct: 473 VLTAQRDLLGAETELSQARTELVLNYVALQKALGGGWN 510 >gi|320324759|gb|EFW80833.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328866|gb|EFW84865.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 465 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 142/475 (29%), Positives = 245/475 (51%), Gaps = 35/475 (7%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFN 57 M+ + F SL ++ LA C VGP+Y P +P Q + N +DT+ WW+ F Sbjct: 1 MSAFKLFFPSLLVMALAACAVGPDYKAPVT--VPAQLASAAQGNYDRSKVDTV-WWQQFE 57 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASIS 105 D +LNKLV +L N + A R+ AA+ +++ RA DL ++ Sbjct: 58 DPTLNKLVARSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVT 117 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 R + N + G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y Sbjct: 118 ERRV-NSERYDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAY 175 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIP 220 R + R +IA L KN + S TQ G ++L +V+ EA + ++E+ +P Sbjct: 176 GQLRGAQLREAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVP 231 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L+ + I+TLLG + S + P + + IG P ++RNRPDIR Sbjct: 232 QLQAEQVRQRNRIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRA 288 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDK 337 E++LA S A+IG+A +DL+P +SL+ + T S G + WS GP + FD Sbjct: 289 AERQLAASTARIGVATADLFPRVSLSCFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDL 348 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + L + + + Sbjct: 349 GSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAA 408 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ + YR+G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 409 RLASVQYREGTADFLVLLDAERERLAAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|328954012|ref|YP_004371346.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] gi|328454336|gb|AEB10165.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] Length = 527 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 134/469 (28%), Positives = 233/469 (49%), Gaps = 26/469 (5%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKL 64 + +L +L AGCT VGP+Y P + + K +N + +WW FND +L++L Sbjct: 13 VCALIAILAAGCTKVGPDYLTPPVQVTDNWLETDGRKITPVNEEHREWWRVFNDKALDRL 72 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKTNSTGQL 120 ++ A Q NLT+ QA R+ AK + +L+P + ++ +R T L Sbjct: 73 IQQAYQDNLTLQQAGVRVLQAKAQLGIAIGELYPQTQQAVGSLEKNRLSAKGSTQGATAL 132 Query: 121 ---------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ W++D +G+ RR IES+ ANL + A D +++ +++ +YI R F Sbjct: 133 NYTTSKLGAEATWELDFWGKLRRTIESADANLQATVAGYDSVLVSLTAEVANTYIVLRTF 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R+ IA + + +++E++ +F G TS + + + S E+ IP LE R Sbjct: 193 EKRLDIARNNVQVQNESLEIARYRFEGGVTSMRDVEQALTVLGSTEATIPRLEALVRQAK 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +S LLG P + + P + +GIPADL+R RPD+R E + A A Sbjct: 253 NALSVLLGRPPMQLPELLP--GYGTVPVPPPTVAVGIPADLLRRRPDLREAEWQAAAQCA 310 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--------SFPGYNTHWSFGPKLYLPIFDKGKIKS 342 +IG+AK+DL+P+ L GS T + F + GP I + G+I + Sbjct: 311 RIGVAKADLFPAFYLRGSFGFTAADVGNIALADMFQWRSREGFGGPSFRWNILNYGRITN 370 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +R ++ QE + +Q VL A +EVE+ L + + + L + ++S+ L+MI Sbjct: 371 LVRVQDARFQELLLAYQNLVLKAQQEVEDNLIAFLKTEDQAKFLGESTAAAERSLKLAMI 430 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G +L ++ + +L+IA +A+S V +Y A+G G+ Sbjct: 431 QYREGMTDFTTVLTAQQNLLSQQDNLAIALGDIARSLVGIYRALGGGWQ 479 >gi|254235826|ref|ZP_04929149.1| hypothetical protein PACG_01767 [Pseudomonas aeruginosa C3719] gi|126167757|gb|EAZ53268.1| hypothetical protein PACG_01767 [Pseudomonas aeruginosa C3719] Length = 479 Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 239/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P ++S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDRPA-PGEWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGTYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPARAIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|15598033|ref|NP_251527.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|9948923|gb|AAG06225.1|AE004710_7 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] Length = 479 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 239/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P ++S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDRPA-PGEWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPARAIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|53804056|ref|YP_114045.1| multidrug efflux system outer membrane subunit [Methylococcus capsulatus str. Bath] gi|53757817|gb|AAU92108.1| multidrug efflux system outer membrane subunit [Methylococcus capsulatus str. Bath] Length = 520 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 138/480 (28%), Positives = 237/480 (49%), Gaps = 43/480 (8%) Query: 3 ILRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDT 59 ILR SL + C+ VGP+Y +P +P ++ +T+ WW++F D Sbjct: 38 ILRLFASLLGAVFTACSPVGPDYRRPDT-TMPERWHEAEPPPAAPSETVGADWWKAFGDP 96 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 LN+L++ A+ NL + Q RI AA+E + A+ P S+ S+S R N+ Sbjct: 97 VLNRLIREAMVANLDLKQTYTRIRAAREQRIVAIANGLPIVSNKESVSRRL------NNA 150 Query: 118 GQ----------------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 GQ D W+IDLFG RR IE++ ANL++ + Sbjct: 151 GQSGAGGQPGGVGFGNNIDIFQLGFDVQWEIDLFGGIRRSIEAAEANLEAEVENSRAVLV 210 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ + +YI+ R + ++++ L L + L +++ G + L V+ EA Sbjct: 211 TLLGDVARAYIEMRSNQHLLNVSQANLKLQLETARLMRIRYQAGLSDSLEAVQAEALAAQ 270 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLI 272 ++ +P E + + +H + LLG P + + QP P I + +P++L+ Sbjct: 271 TQAQLPVYETARKQAMHQLELLLGKPPGALQTLLDPE----QPVPSAPDRILLDLPSELL 326 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKL 330 R RPDIR E++LA + A++G+A +DLYP ++ + + + WS L Sbjct: 327 RRRPDIRLAERQLAAATAQVGVATADLYPKFNIAAFLGFQNMKITDVTALSKSWSAAGTL 386 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF+ G+I++NI ++ ++ ++ +Q VL A+K+VEN+L + ++K L+ AV Sbjct: 387 TTPIFNWGRIRANIDAKKAQQEQSFLAYQSAVLGALKDVENSLVAYAQEKDRRAALEQAV 446 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E ++ ++ LS YR G S L++LD ERA E DL ++ +A V LY A+G G+ Sbjct: 447 ESNRLALKLSKERYRSGLTSFLNVLDSERAVYSAESDLVRSQASVAADLVSLYKALGGGW 506 >gi|308270628|emb|CBX27240.1| hypothetical protein N47_A12690 [uncultured Desulfobacterium sp.] Length = 485 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 142/453 (31%), Positives = 240/453 (52%), Gaps = 21/453 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIALQQN 72 GC VGP+Y KP LP+ ++ K+ N T K WW +FND L LV A++ N Sbjct: 31 GCAVGPDY-KPIETTLPSTWAGPAPKSDTNTITEKDIACWWTAFNDPLLVSLVNRAIESN 89 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHR--FIPNLKTNSTG--------QLDS 122 L I QA RI A+ + P A S+R P + G D+ Sbjct: 90 LDIRQAEARIRQARAARGVSLSGFGPVLNAVSSYRRSHSPQSAAANDGITSSQYQAGFDA 149 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D+FG RR +E++ A+L+ + + + +++ +YID R +++R++IA L Sbjct: 150 AWELDIFGGVRRSVEAADADLNVVIEGRNDVLVTLAAEVAVNYIDLRAYQQRLNIARNNL 209 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 K EL+H T G + L +A+ + + IP LE S +++++S L+G Sbjct: 210 AAQKHTAELTHKIVTAGFANSLDAANADAQAATTAAQIPLLEASAEQSIYSLSLLIGREP 269 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 L +++ S+ + +P+ G+P+DL+R RPDIR E ++ + A+IG+A +DL+P Sbjct: 270 AALLTELKESSDIPAASPLVPV--GVPSDLLRRRPDIRRAEAQIHAATARIGVATADLFP 327 Query: 302 SLSLNGSIALTHD--NSF-PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S++GS +D NS+ N WSFGP + IF+ GK SNI ++ ++ IT+ Sbjct: 328 KFSISGSAGFQNDEFNSWMDRVNRFWSFGPSVSWQIFNTGKTISNIELQKALQEQSAITY 387 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T+L A+KEV+NAL + ++++ AV +KK++ L+ Y G+ L++L + Sbjct: 388 KQTILTALKEVDNALIASTKEEERKKAFSDAVAANKKAVDLAKQLYIHGQTDFLNVLLAQ 447 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ E L+ + R ++ + V LY AIG G+ Sbjct: 448 RSLYASEDALAQSTRTVSTNLVALYKAIGGGWG 480 >gi|313107979|ref|ZP_07794148.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|310880650|gb|EFQ39244.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 479 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 238/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P +S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDRPA-PGDWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQSR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPAREIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|218890965|ref|YP_002439831.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|218771190|emb|CAW26955.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 479 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 238/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP +T+P P P ++S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPNFTRPDRPA-PGEWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGTYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPARAIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|156934684|ref|YP_001438600.1| hypothetical protein ESA_02519 [Cronobacter sakazakii ATCC BAA-894] gi|156532938|gb|ABU77764.1| hypothetical protein ESA_02519 [Cronobacter sakazakii ATCC BAA-894] Length = 513 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 130/483 (26%), Positives = 240/483 (49%), Gaps = 54/483 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--------LKWWESFNDTSLNKLVKIA 68 GC VGP+Y +P P+ P F +N ++ + +WW +F L+ L++ A Sbjct: 20 GCAVGPDYQRPE-PVTPGAFGETARQNAPDVASKARSTAPDPRWWRTFKSPQLDSLIERA 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFIPNLKT 114 + NL++ Q RI A+E I FP+ ++ SH L Sbjct: 79 IAGNLSLQQTVLRIAGAREQINQAGGAFFPAVNGNVRATRQQLGLEGELKSHDVYGQLDA 138 Query: 115 NST-----------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 G D+ W+IDL+G+ RR +E++ A +A Q + A +++ Sbjct: 139 VDPQISSALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAADAQQKAAIEQRNDALVSL 198 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +++ R + ++ +Q + ++ +EL+ + G + +L + A++ +++ Sbjct: 199 EAEVARAWLQLRGAQSILATMNQQIASAQQTLELTESRQQSGLSPQLDVENARAQLGTLQ 258 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + +P + R ++ ++ LLG P +Q QP +P + +GIP+ L R Sbjct: 259 AQLPQYQAQERQAMNGLAVLLGKPPGALDAELQA----AQPLPPLPEIVPVGIPSTLARR 314 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK 329 RPD+R E +L + A+IG++ + L+PSLSL+G + NS Y T WS FGP+ Sbjct: 315 RPDVREAEARLHAATAQIGVSVAQLFPSLSLSGQFGMR--NSETSYLTDWSSHFYSFGPQ 372 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + +PIF G++ S+++ A + + +++TVL A+ +VENAL S D++ L+ Sbjct: 373 VSIPIFQGGRLVSSVKLARAEQGAAALQYRQTVLTALSDVENALVSYRTDQQREAGLEKT 432 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +E + S L+ +YR+G + +D+LD +R A+ E + A+ Q + V LY A+G G Sbjct: 433 LEALQTSFDLASDSYRKGIATFIDVLDAQRQLAQAEQQRAQARVQSSLDLVALYKALGGG 492 Query: 450 YNP 452 + P Sbjct: 493 WEP 495 >gi|254241504|ref|ZP_04934826.1| hypothetical protein PA2G_02202 [Pseudomonas aeruginosa 2192] gi|126194882|gb|EAZ58945.1| hypothetical protein PA2G_02202 [Pseudomonas aeruginosa 2192] Length = 479 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 238/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P +S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDHPA-PGDWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQSR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPAREIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|307823718|ref|ZP_07653946.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307735012|gb|EFO05861.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 526 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 134/471 (28%), Positives = 238/471 (50%), Gaps = 32/471 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLV 65 ++SL +LL+ C VGP+Y +P + + N + + WW+SFND LN+L+ Sbjct: 13 VWSLAFLLLSSCMVGPDYVRPATETATQWLEAEDRRLNTTSANDQTWWKSFNDPVLNQLI 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP-----------------SSYASISHRF 108 A +NL I A R+ A+ + +++P +S A+ S F Sbjct: 73 DRAYLENLNIRIAGVRVLEARAQLGIAIGNIYPQNQQLTGSLSKVHLSERASQAAFSKIF 132 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + G L + W+ID +G+ RR IES+ A +A A + A +++ + + +YI Sbjct: 133 --DYAQTQLG-LTASWEIDFWGKFRRAIESADAGFQAAVADYNNALVSLTADVAHAYITI 189 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++R+SIA Q +D K+++ ++ +++ G TS+ + + + + ++ IPTLE R Sbjct: 190 RTLEKRLSIARQNVDTQKESLNIAKIRYNGGTTSERDVEQARTVLANTQASIPTLEIGLR 249 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG + + P + + +GIPA+L+R RPD+R+ E + A Sbjct: 250 QQQNALSVLLGAAPGRISGLLAGTAQIPAPP--VQVAVGIPAELLRRRPDVRHAEWQAAA 307 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN--SFP-GYNTHW-----SFGPKLYLPIFDKGK 339 A IG+ K+ LYP+LSL G+ L + SF G W +FGP L IF+ G+ Sbjct: 308 QSASIGVTKAALYPALSLTGTFGLLSSDVGSFALGDVFLWKSRTANFGPALQWNIFNYGQ 367 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I + +R ++ Q I++Q TVL+A +EVE+ L + ++ L + ++S+ L Sbjct: 368 ITNQVRVQDARLQGLLISYQNTVLSAQREVEDNLVAFLRSQERAQSLGESTAAAQRSLDL 427 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + YRQG +L ++A + L+ ++ + V +Y A+G G+ Sbjct: 428 ATLQYRQGITDFTTVLTAQQALLSEQDSLANTLGDISNNLVGVYRALGGGW 478 >gi|323530267|ref|YP_004232419.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323387269|gb|ADX59359.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 507 Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 239/488 (48%), Gaps = 49/488 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMP----LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L V +AGCTVGP + +P TQ + SK + WW FND LN L Sbjct: 16 LACVAMAGCTVGPNFERPQSATPDVFERTQAAQSPSKAVEAQFGPDWWTLFNDPILNDLE 75 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--------------------------- 98 K QNL++ A+ R+ ++ V A +P Sbjct: 76 KRLADQNLSVAAASARLLQSRAERRVVGAAEYPTLGGAASYNRERGSENGILSLLGVTPS 135 Query: 99 -------SSYASISHRFIPNLKTNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSA 145 S A + +P K + D+ W++DL+G+ RR +E+ A ++ Sbjct: 136 QSQPLSASGSAPLGVAAMPGSKGSPAYNVYQAGFDASWELDLWGRVRRSVEAVTAQSQAS 195 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 Y + L+ ++L YI+ R ++ + IA + L + ++L+ + +G T+ L + Sbjct: 196 YEDRNAILLSARAELARDYIELRDTQDLLQIAKENLAIANGALKLTRDRAREGVTTDLDV 255 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI 265 A++++IES IPTLE ++ I LL + + + P L + I Sbjct: 256 SNAAAQVENIESLIPTLESQSETTINAIGLLLAQEPGALRQTLAEPRD--VPPLPAQVPI 313 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNT- 322 G P++L++ RPDIR E +L + AKIGIAK+D YP ++LNGS L +S + + Sbjct: 314 GFPSELVQRRPDIRKAEAELHAATAKIGIAKADFYPRITLNGSAGLQSLQLSSLGSWASG 373 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 + GP + LPIF+ G++K ++ E+ QE I +++TVLNA +EV++AL + + +++ Sbjct: 374 QFVAGPSITLPIFEGGRLKGMLQLREAQQQEAAIVYKQTVLNAWREVDDALVTYDGEQRR 433 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +L AV +++++++++ Y+ G LD+L+++R + +L +K A + + L Sbjct: 434 RDRLSLAVSMNERALAVARDRYKAGALDYLDVLNVQRQLLDAQSNLQKSKAAAATNLITL 493 Query: 443 YIAIGSGY 450 A+G G+ Sbjct: 494 CKALGGGW 501 >gi|328952703|ref|YP_004370037.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] gi|328453027|gb|AEB08856.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] Length = 491 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 146/483 (30%), Positives = 254/483 (52%), Gaps = 38/483 (7%) Query: 3 ILRAIFSLF-----IVLLAGCTVGPEYTKPHMPLLPTQF------SIGN-SKNLINIDTL 50 +R + SLF ++L GC VGP+Y P + P ++ + G SK TL Sbjct: 8 FVRYLISLFWTVSSLILAIGCAVGPDYQAPKTEV-PAEWNGQAFVTQGQASKTTTEPVTL 66 Query: 51 -KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-ISHRF 108 +WW FND +LN LV++A+ NL + Q RI A+ A L P+ AS I R Sbjct: 67 AQWWGIFNDRTLNSLVELAITANLDLKQVEARIRQARAARGVAGAGLGPTVDASVIYQRS 126 Query: 109 IPNLKTNSTGQ-----------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVD 150 + +T +G LDS W++D FG RR++E++ A+L +A Sbjct: 127 KSSSETVGSGGSPTVAATGAFRELFQVGLDSSWELDFFGGTRRNLEAATADLRAAMEDRR 186 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + +I + +Y++ R +++++IAH+ L++ +K + H +F G S+L + +A Sbjct: 187 DVLITLIGDVGSNYLNLRGLQQQLAIAHKNLEVQRKTAAIVHRRFETGFVSRLDVANADA 246 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + + E+ IP LE S + ++++ LLG + + + P I IG+P+D Sbjct: 247 QAAATEAQIPVLESSAQAAIYSLGVLLGQNPAALETTLVRPNPL--PPTPPKIPIGLPSD 304 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPGYNT--HWSFG 327 L+R RPDIR E +L + A+IG+A +DL+P L G ++ D + G + +WSF Sbjct: 305 LVRRRPDIRRAEAQLHAATARIGVATADLFPRFFLTGGFGVSARDLNRLGISNSRYWSFS 364 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + PIF G+I+ NI + ++ ++T+Q+TVL A+KEVE AL + ++++ L Sbjct: 365 PTVTWPIFASGRIRWNIEMQNALQEQAFLTYQKTVLTALKEVETALVAYAKEQEHRQSLA 424 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 AV+ +++++ L+M Y G+ L++L +R+ E L + ++L + + LY A+G Sbjct: 425 TAVDNNRQAVDLAMKLYVAGKTDFLNVLTAQRSLYVNEEALVQSTQRLTVNLITLYKALG 484 Query: 448 SGY 450 G+ Sbjct: 485 GGW 487 >gi|116050841|ref|YP_790336.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|115586062|gb|ABJ12077.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] Length = 479 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 238/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P+ P P +S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPNRPA-PGDWSLQAATGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQSR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ + ++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARHSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPAREIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|114763048|ref|ZP_01442478.1| nodulation protein T precursor [Pelagibaca bermudensis HTCC2601] gi|114544372|gb|EAU47380.1| nodulation protein T precursor [Roseovarius sp. HTCC2601] Length = 377 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/347 (32%), Positives = 202/347 (58%), Gaps = 10/347 (2%) Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + I N TNS G + +DLFG +RR E++L +L SA V A+L +S L+ +Y Sbjct: 24 NEMIDNTATNS-GSFNPAIVLDLFGGERRSREAALVSLQSAELSVGTARLAYLSSLVTNY 82 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ID R+F+ ++I Q ++ ++ + L + GA + L + +A + + + +P LE Sbjct: 83 IDMRYFQNALAINRQTIETRRETLSLVQSQREAGAATALDEAQAQASLDADLASLPGLES 142 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 F + I+TLL P +++ + QP ++G+PADL+RNRPD+R E+ Sbjct: 143 GFYSATYAIATLLAQPVQSIEDRLERGA--AQPRPASGADVGVPADLVRNRPDVRAAERN 200 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 LA + A+IGIA++ LYPSL+L G+I T G+N+ W+FGP + LP+ ++ +++ Sbjct: 201 LAAATAEIGIAEAALYPSLTLGGTITRTE-----GFNS-WTFGPSVVLPVLNQPALRAQR 254 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + + A++ + W+ +VL+A++EV++A TS +++ V Q +V +++ + LS Y Sbjct: 255 DQQAAQAEQSELQWRSSVLDAVEEVQSAQTSYLRNRRAVAGYQRSVASNERVVELSRETY 314 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G +LLD+L ++RA + + L+ + R LA S+ L +A G G++ Sbjct: 315 RGGTTTLLDLLTVQRALSSARLTLASSVRDLATSWASLQVAAGKGWS 361 >gi|167645051|ref|YP_001682714.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167347481|gb|ABZ70216.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 482 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 127/465 (27%), Positives = 231/465 (49%), Gaps = 20/465 (4%) Query: 4 LRAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 L+ LF ++LL+ C VGP+Y P + Q + + + N + +WW++F D L Sbjct: 20 LKVQLGLFASMLLLSACAVGPDYKTPVDAPVVVQNAPAGAFSTANPEA-QWWKAFGDPVL 78 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-- 119 + LV AL NL I A R++ A+ R D P A S+ + S GQ Sbjct: 79 DGLVTQALAGNLDIKVAVARVDEARALFKDARLDQLPRVTADGSYVKSDQQQPGSNGQRV 138 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 D+ W+IDLFG+ RR +ES+ A +A A + A++ + +++ +Y++ R Sbjct: 139 ESETYQGGFDAGWEIDLFGRVRRGVESARAEAGAAKADLRDAQVTIAAEVARNYLELRGA 198 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + R+++A++ LD ++ + L+ +++ GA + + + +A + + E+ IP+L + + Sbjct: 199 QARLAVANRNLDTQRETLRLTKVRYDAGAGNPIDVASAQARLNATEAAIPSLITAEKHAN 258 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L G + Q+ P L + IG ADL+R RPDI+ E++LA A Sbjct: 259 YRLCVLTGQRPGALDATLVVQNAEVTP-LITALPIGDAADLLRRRPDIQAAERRLAAQTA 317 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRR 346 K+G+A +DL+P + + G I S G+ WS P + P D G ++ Sbjct: 318 KVGVATADLFPRVRVTGFIGFLS-GSASGFGNSASQAWSVAPSVTWPALDLGGAHQRLKA 376 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ + +TVL A++++ENAL + + + L + +++ L+ I Y++ Sbjct: 377 AQARNDASLAVYDQTVLTALEDLENALVGYRQQQAQLVSLTNQAAASRRAAELARIQYKE 436 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD ER E L++A+ + + V +Y A+G G+ Sbjct: 437 GGIDFLVLLDAERTLLAAEDSLTVAETGVNTNVVAIYKALGGGWT 481 >gi|296388676|ref|ZP_06878151.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] Length = 479 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 121/462 (26%), Positives = 237/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P +S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDRPA-PGDWSLQAAAGNPSHLAAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQSR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ + ++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARHSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPAREIPRPPGSVPV--GLPSELAQRRPDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|222056600|ref|YP_002538962.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. FRC-32] gi|221565889|gb|ACM21861.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. FRC-32] Length = 504 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 239/470 (50%), Gaps = 21/470 (4%) Query: 1 MNILRAIFSLFIVLLAGC-TVGPEYTKPHM--PLLPTQFSIGNS--KNLINIDTLKWWES 55 ++++R + + + LAGC TVGP+Y KP + P + NS K D +WW + Sbjct: 26 VHLVRWLIIIATLALAGCVTVGPDYVKPELDVPANWNRLDQANSETKAAATGDLSRWWLA 85 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL 112 ND L+ L+ ALQ + + A R+ A+ A L+P+ AS S +R L Sbjct: 86 LNDPLLSGLIDDALQASPDLRSAKARLREARARGAVASAGLYPAVTASGSARRNRSSEEL 145 Query: 113 KTNSTGQL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ST L D+ W++DLFG RR IE++ A+++S+ A ++ +++++++ +Y++ Sbjct: 146 GGGSTQNLFRADFDAQWELDLFGGVRRGIEATRADVESSVASLENTRVSLVAETAQNYVE 205 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R+ IA L + ++L+ + G S + + + + + IP LE S Sbjct: 206 VRTLQLRLGIARDNLVSQTETLQLTDWRAQAGLVSSQDVDQARSNREQTRARIPGLEISL 265 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H + LLG P T L + P++ + I +GIPA+ +R RPD+R E+KL Sbjct: 266 AEAEHRLEVLLGKTPGT--LQGRLAVAGEL-PSVPMQIAVGIPAETLRQRPDVRAAERKL 322 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A A+IG A++ YPS S++GSI ALT S + PIF+ GK+++ Sbjct: 323 AAETARIGAAEAARYPSFSISGSIGFEALTVGALGSSGAATSSLLAGITAPIFNAGKLRN 382 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + ++ ++ + ++++VL A++EVENAL + + +++ L +A E + + + Sbjct: 383 QVVIQDAVREQALVAYEQSVLTALQEVENALVAFSRNRESSEALTNAAESARNAARSARQ 442 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G +LD ER VE L+ + + + LY A+G G++P Sbjct: 443 RYSAGLIDFQSVLDTERTVLSVEDSLASTRANQVAALIRLYKALGGGWSP 492 >gi|66046200|ref|YP_236041.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63256907|gb|AAY38003.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 465 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 144/467 (30%), Positives = 243/467 (52%), Gaps = 32/467 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I SL ++ LA C VGP+Y P P + GN + +D + WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYQAPVTAPAKLASAAQGN-YDRSKVDRV-WWQQFEDPTLNKLV 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLK 113 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 66 ARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSE 124 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD W++DLFG+ +R +E+S A+ D+A A + ++ +I++++ +Y R + Sbjct: 125 RYDLG-LDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRGAQL 183 Query: 173 RISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 R +IA L KN + S TQ G ++L +V+ EA + ++E+ +P L+ Sbjct: 184 REAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEASVPQLQAEQAR 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + I+TLLG + S + P + + IG P ++RNRPDIR E++LA S Sbjct: 240 QRNRIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAAS 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A +DL+P +SL+G + T S G + WS GP + FD G +++ IR Sbjct: 297 TARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIR 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR Sbjct: 357 SADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYR 416 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 417 EGTADFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|294676171|ref|YP_003576786.1| RND efflux system outer membrane lipoprotein [Rhodobacter capsulatus SB 1003] gi|294474991|gb|ADE84379.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodobacter capsulatus SB 1003] Length = 450 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 120/412 (29%), Positives = 206/412 (50%), Gaps = 17/412 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LAGC +Y P + P F + WW +F D +L++L+ +NL Sbjct: 17 LAGCAQ-VDYAAPAAKV-PATF---EAAAPGRAAAGPWWSAFRDPTLDQLIAAGRARNLD 71 Query: 75 ILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTNSTGQLDSDWKIDLFG 130 +LQA I A+ ++ A P ++ + + + +G L W DLFG Sbjct: 72 VLQAIAAIEEARASVSGAGAADLPQVSGTLKDTRGNTSGTGIAESRSGALAVGWTADLFG 131 Query: 131 QRRHIESSLANLDSA-YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 R ++ + A YA D+A+L + + +Y + R+ + I++ + L+ +K++E Sbjct: 132 ANRANRAAASARLDAAYASADVARLVMEGAIAQAYAELRYQQASIALTRKSLESRRKSLE 191 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ + G +L L++ E + E+ +P E +F + ++TL P + + Sbjct: 192 LTRAQVESGTAGRLELLQAEQLVAEGEAQLPGYETAFDQALVTLATLTAQPVSALRPQLS 251 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 + + QP ++G+PAD++R RPD+R E+ A +V IG+AK+ YPS++L+GS+ Sbjct: 252 RGAG--QPRPRFKASVGVPADVLRTRPDVRLAERNYAAAVYDIGVAKAAFYPSVTLSGSV 309 Query: 310 ALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 TH NT +W+ GP L LPIF G ++N+R AE+ A + + W++ VL AI Sbjct: 310 TPTHVRD---ANTIRYWAVGPSLNLPIFTGGANQANLRGAEARAVQAKLAWEKAVLTAID 366 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 EVE+AL + N D + + H V +++ LS NY G + +LD ER Sbjct: 367 EVESALAAYNRDGRNIAAQTHLVATSAETLELSRTNYSLGEGDFMTVLDAER 418 >gi|167035566|ref|YP_001670797.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166862054|gb|ABZ00462.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 483 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 25/465 (5%) Query: 10 LFIVLLAGCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L VL+AGCT+GP++ +P P P Q S+ L+WWESF+D L+ L+ Sbjct: 11 LLAVLMAGCTMGPDFRRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWESFHDAQLSALI 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------PNLKTNS 116 + ++NL + A+ R+ ++ +V AD PS A+ + P+ K Sbjct: 71 QRVAERNLDLQMASARLLQSRALRSTVAADEMPSVDANAGYSRARNSAEGLSDPSGKAGK 130 Query: 117 T------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + W++DL+G+ RR +E++ A+++ A L ++S+ +YI R Sbjct: 131 AAYNLWQGDLVAGWELDLWGRVRRQVEAADASVEVAENDRRGVLLALLSETAGNYIQLRA 190 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + +++LS + +G ++L + + A++ SIES +P+LE + R + Sbjct: 191 VQHTLDVTQDNLKVARHSLKLSEDRQAEGVATRLDVAQASAQVASIESRLPSLE-ARRDD 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + N +LL L Q P IG+P++L RPDIR E +L + Sbjct: 250 LINALSLLAAEPPRSLQAELLQGGEL-PAPQQKFAIGLPSELAERRPDIRQAEARLHAAT 308 Query: 290 AKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 A IG+AK+D YPS+ L+GS+ + F G+++ ++FGP+L LPIF+ G++K + Sbjct: 309 ASIGVAKADFYPSIRLSGSVGFQAMQLSDFGGWDSRRFAFGPQLSLPIFEGGRLKGTLEL 368 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ QE + +++ VL A E+++ L N + L AV ++ ++ + Y + Sbjct: 369 REAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVE 428 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++L ++ A E + ++++ V LY A+G G+ Sbjct: 429 GAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|77918426|ref|YP_356241.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] gi|77544509|gb|ABA88071.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] Length = 479 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 130/471 (27%), Positives = 240/471 (50%), Gaps = 22/471 (4%) Query: 1 MNILRAIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLKWW 53 MN +R + ++F++ G T VGP+Y P + +P +S+ + D +WW Sbjct: 1 MNTIRCVRTMFVLACLGLTACVAVGPDYVPP-VADVPATWSMATDNQGQAAEPGDLSRWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 E FND LN LV AL NL + A ++ A+ + L PS + S + + Sbjct: 60 EEFNDPVLNDLVTDALTANLDLATARAQLREARAQRALAGSQLGPSVDVATSASRSQSSE 119 Query: 114 TNS--------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + + D+ W+ D+FG RR +E++ A++D++ + +++++++++ +Y Sbjct: 120 ESGSGSTSELYSAGFDASWEADVFGGLRRGVEAAAADVDASVESLRDTQVSLVAEVVLNY 179 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 +D R + R+S+A + + L+ + G S+L + + E++S + +P L Sbjct: 180 VDLRTAERRLSVAENNIASLSETYRLAGWRLQAGLVSELDVAQARTELESTRASLPALRT 239 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ LLG E ++ S P +GIPAD++R RPD+R E++ Sbjct: 240 TRAEARNRLAVLLGSSPAELGSRLE--SAGAIPLAERAAAVGIPADILRQRPDVRAAERQ 297 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA A++G A+++ YPS L+GSI ALT G +S + PIFD G+I+ Sbjct: 298 LAAQTARLGEAEAERYPSFKLSGSIGLEALTLSALSNGGAAVYSLLGSITAPIFDSGRIR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +NI ++ ++ + ++ VL A+++VENAL ++N K L A + ++++ L+ Sbjct: 358 ANIETQDALLEQTRLAYKAAVLTALEDVENALVAVNNAGKRRETLTLAADSARETLQLAE 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G L +LD +R +E DL+ + LA + + LY A+G G++P Sbjct: 418 QRYAGGLVDFLTVLDSQRTLLGLEDDLASSAGDLAGAQIQLYKALGGGWSP 468 >gi|330950467|gb|EGH50727.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 465 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 144/467 (30%), Positives = 243/467 (52%), Gaps = 32/467 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I SL ++ LA C VGP+Y P P + GN + +D + WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYQAPVTAPAKLASAAQGN-YDRSKVDRV-WWQQFEDPTLNKLV 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLK 113 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 66 ARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSE 124 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD W++DLFG+ +R +E+S A+ D+A A + ++ +I++++ +Y R + Sbjct: 125 RYDLG-LDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRGAQL 183 Query: 173 RISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 R +IA L KN + S TQ G ++L +V+ EA + ++E+ +P L+ Sbjct: 184 REAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQAR 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + I+TLLG + S + P + + IG P ++RNRPDIR E++LA S Sbjct: 240 QRNRIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAAS 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A +DL+P +SL+G + T S G + WS GP + FD G +++ IR Sbjct: 297 TARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIR 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR Sbjct: 357 SADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYR 416 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 417 EGTADFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|303245959|ref|ZP_07332241.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio fructosovorans JJ] gi|302492742|gb|EFL52610.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio fructosovorans JJ] Length = 534 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 145/485 (29%), Positives = 242/485 (49%), Gaps = 43/485 (8%) Query: 4 LRAIFSLFIVL-LAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDT 59 R + F+ L L GC +GP++ +P L T G + L ++ WW++F D Sbjct: 8 FRLCATFFLALCLCGCMKLGPDFKRPDAQLYDTWAEDG-ADGLKQGQAVQNEWWKTFGDP 66 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--------YASISHRFIPN 111 L+KLV+ A +NLT+ A R+ + + L+P S Y+ SH P+ Sbjct: 67 ELSKLVRTAFDRNLTLRVAGLRVIEGRAQLGIAVGQLYPQSQAASGGYTYSRESH-LGPS 125 Query: 112 L-------KTNSTGQL-------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 KT S Q+ + W++D +G+ RR IES+ A + ++ A D A +++ Sbjct: 126 WPQPSTESKTTSPDQIWQNTVAFSAAWELDFWGKYRRGIESADAAMRASAADYDNALVSL 185 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + +Y+D R + ++ IAH+ ++L K+ ++++ +F GATS+ + + + + S E Sbjct: 186 AGDVARTYLDLRINQAQLKIAHENVELEKEGLKIAEARFRYGATSERDVQQAKTMLLSTE 245 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + IP + + + N H +S LLG P + + P I +G+PADL+R RP Sbjct: 246 ATIPGFQSAIKKNRHALSVLLGLPPDKAPEGLTDSEGIPAPPW--EIAVGVPADLLRRRP 303 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----------SFPGYNTHWSF 326 D+R E A+IG+AK+DL+PS SL GSI N S G+ F Sbjct: 304 DVRAAEYAAMAQCAQIGVAKADLFPSFSLTGSIGFLASNVGVFKLSELLSNNGFTAQ--F 361 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P+ +F+ G+I N+R ++ Q I +Q+TVL A++EVE+A+T+ V L Sbjct: 362 SPQFGWNLFNYGRIIDNVRVQDAKFQALLIQYQQTVLTALREVEDAMTAYIGASAQVVSL 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A + K+S L+ I Y +G+ +L ++ K + DL + Q+A S V LY A+ Sbjct: 422 AKAADAAKRSADLAFIQYSEGKTDYTTVLVAQQQLLKQQDDLVQMRGQVATSLVSLYRAL 481 Query: 447 GSGYN 451 G G+ Sbjct: 482 GGGWQ 486 >gi|114331918|ref|YP_748140.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Nitrosomonas eutropha C91] gi|114308932|gb|ABI60175.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Nitrosomonas eutropha C91] Length = 493 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 127/484 (26%), Positives = 246/484 (50%), Gaps = 44/484 (9%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNS------------------------K 42 F L ++ L GC VGP+Y P + P +F+ S K Sbjct: 9 FRLLVLFLTGCAAVGPDYVPPE-KITPEKFNAALSEDQKAKLSLPETGQEADEAKTEFTK 67 Query: 43 NLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA 102 + + WW + D L +L++ A++ NL + A R+ + + R+ LFP+ Sbjct: 68 QVTPAMLVDWWNTLEDPLLTRLIEWAIRGNLDLQLAQSRLREERASRGIARSGLFPTIEG 127 Query: 103 SISH-RFIPNLKTNSTGQLD-------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 + R NL++ ++D + W+ID+FG RR IES+ A++++ +++ Sbjct: 128 DAAFTRRKTNLQSGGISEIDLYSLSFDASWEIDMFGGIRRSIESAQASVEARQEELNDTL 187 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + +++++ +YI+ R F+ R+ A L+ + +++ + G T+ LSL + + ++ Sbjct: 188 VTLVAEVAINYIEIRAFQARLEAAVNNLESQEGTLQIVQDRLDAGLTTTLSLEQAKYNLE 247 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--PADL 271 + +S+IP L+ + ++ LLG EF + ++ +Q + + + + PADL Sbjct: 248 NSKSEIPMLQTGIEQGKNGLAVLLG----EFPGSLAEELEQYQKVPTVSVEVVVGVPADL 303 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP 328 +R RPD+R E++LA A++G+A +DLYP L L GS+ L + ++ F G + GP Sbjct: 304 LRRRPDVRRAERELAAQTARVGVATADLYPRLFLFGSVGLEYISAASFFTGPAAAFQIGP 363 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 ++ P+F+ G+I+ NI+ + + I ++ +VL A+K+VENAL ++ L Sbjct: 364 QIRWPVFNAGRIRQNIKIEDERQSQALIQYEASVLTAVKDVENALIDFANEQVRRQALIK 423 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + K ++SLS Y G + +LD ERA + L++++ ++ + + LY ++G Sbjct: 424 STQSAKSAVSLSRELYTAGLTDFIGVLDAERALFSFQDQLAVSEGKVTSNLIRLYKSLGG 483 Query: 449 GYNP 452 G+ P Sbjct: 484 GWKP 487 >gi|107102387|ref|ZP_01366305.1| hypothetical protein PaerPA_01003449 [Pseudomonas aeruginosa PACS2] Length = 479 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 120/462 (25%), Positives = 238/462 (51%), Gaps = 27/462 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINID-TLKWWESFNDTSLNKLVKIAL 69 L C++GP++T+P P P ++S+ GN +L +WW F+D LN L++ Sbjct: 14 LGACSLGPDFTRPDRPA-PGEWSLQAAAGNPSHLTAAPLAAQWWTLFDDAQLNALLQRVQ 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN----- 115 + NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 73 RANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGTYQRQRTTSAGLFDPSGKAGKGNYN 132 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 133 HALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNR 192 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +I L+ ++++EL+ + G + L + + A++ S+E+ +P +EK+ V+ + Sbjct: 193 AAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNAL 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G L + +P +P+ G+P++L + R DIR E +L + A IG Sbjct: 253 GYLVGASPGSLLAELGPARAIPRPPGSVPV--GLPSELAQRRTDIRRAEARLHAATASIG 310 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 311 VAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQ 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 371 QQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVD 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R + + ++ + V+LY A+G G++P Sbjct: 431 FLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSP 472 >gi|116747895|ref|YP_844582.1| Fis family transcriptional regulator [Syntrophobacter fumaroxidans MPOB] gi|116696959|gb|ABK16147.1| transcriptional regulator, Fis family [Syntrophobacter fumaroxidans MPOB] Length = 512 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/484 (27%), Positives = 248/484 (51%), Gaps = 45/484 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTS 60 R++ + ++ GC VGP Y P + P Q+S + + D +WW F D Sbjct: 14 RSLILGLVAVVGGCMVGPNYRTPPSEM-PGQWS--EEPKGVEVAAAPDISRWWTLFEDPK 70 Query: 61 LNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRF---------- 108 LN L++ A++ N L I A R A+ + + ADLFP+ A S+ + Sbjct: 71 LNDLIERAVRANKDLKIAAARVREARAQRGVTA--ADLFPTVNADGSYVYSQKSLTTTNP 128 Query: 109 ------------IPNLKTNSTG----QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 + + T ST D+ W++DL+G RR +E++ ANL ++ + Sbjct: 129 PLVSSGSSPAATVGGVSTGSTNLFQVGFDAGWELDLWGGTRRAVEAADANLAASVENLRG 188 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + ++S + SY+ R F+ R+ IA + ++ +EL+ +F G +S+L++ + +A+ Sbjct: 189 VLVTLVSDVAVSYMQIRGFQLRLGIARNNIASQRQTLELTEARFEAGLSSELAVAQQKAQ 248 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + E+ +P E R +H + LLG L + P + + G+P+DL Sbjct: 249 LAATEATVPAFESGMRQAIHQLGVLLG--GKPELLLEELLEEEPIPPVPPGVPAGLPSDL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFG 327 +R RPDIR E++LA + A IG+A + L+P SL G++ + PG N ++S G Sbjct: 307 LRQRPDIRASERQLAAATASIGVATAQLFPQFSLTGTVGQQSMFSSKWFTPGSN-YFSIG 365 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + IFD G+I+ NI+ ++ ++ + T+++T+L A+K+VE+AL + ++++ L+ Sbjct: 366 PSVSWAIFDAGRIRWNIKVQDARQEQAFHTYEKTILVALKDVEDALIAYSKEQDTRESLK 425 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 AV+ ++++ +S Y +G L++LD +R + + + +++ V LY A+G Sbjct: 426 LAVDSNRRAYDISYELYAKGLVDFLNVLDAQRNLFVTQDQYAQSTLRVSADLVALYKALG 485 Query: 448 SGYN 451 G++ Sbjct: 486 GGWD 489 >gi|116748527|ref|YP_845214.1| RND efflux system outer membrane lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116697591|gb|ABK16779.1| RND efflux system, outer membrane lipoprotein, NodT family [Syntrophobacter fumaroxidans MPOB] Length = 486 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/463 (28%), Positives = 246/463 (53%), Gaps = 24/463 (5%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLK-WWESFNDTSLN 62 +L I+++ GC VGP+Y +P +P+ T+ + ++ TL WW + +D L+ Sbjct: 18 MALAIMIVTGCAAVGPDYVRPEVPVYEAWNTRLDGDANTGETDVRTLAAWWTTLDDPKLS 77 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQ 119 +LV A++ NL + +A R+ A+ ADLFPS A+ S +R I + T++TG Sbjct: 78 ELVGRAVKGNLDLKKAKARVREARARRGIAEADLFPSLDAAGSATWNRIISDTGTDTTGD 137 Query: 120 L-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L D+ W++D+FG RR +E++ +L ++ + +++++++ +Y+D R +++R Sbjct: 138 LYTAGFDAAWELDVFGGVRRSVEAADRDLQASEEDLRNVLVSLLAEVGLNYLDVRIYQDR 197 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I++A L + L+ ++ G + +L++ + ++ S IP L ++ + Sbjct: 198 IAVAEDNLASQDETCRLTEWRYQAGLSDELAVQQARYNRENTRSQIPLLITGLEAALNRV 257 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG ++++ P L + + G+PADL+R RPD+R E++LA A++G Sbjct: 258 AVLLGEQPGRVHTELERREPIPVPPLQVAV--GVPADLLRRRPDVRQAERQLAAQTARVG 315 Query: 294 IAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +A +DLYP +LNGSI L D + + S GP + IF G I+ NI A+S Sbjct: 316 VATADLYPKFTLNGSIGLEALALKDPA--SASLLLSGGPAITWAIFKGGAIRQNI-EAQS 372 Query: 350 SAQEQ-YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + QEQ I ++ +L A++EVENAL + + + L A + +K+ L+ Y G Sbjct: 373 ALQEQALIQYEAVILGALEEVENALVAYAQVQLRRQALSEATQAARKAAELARHKYEAGL 432 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++LD +R+ + L+++ + + + LY A+G G+ Sbjct: 433 TDFTNVLDAQRSLLSFQEQLALSNGNVTGNLMRLYKALGGGWT 475 >gi|307822568|ref|ZP_07652799.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307736172|gb|EFO07018.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 482 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 131/462 (28%), Positives = 239/462 (51%), Gaps = 32/462 (6%) Query: 16 AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 +GC VGP+Y +P +P+ P Q++ + + +WW++FND L+KL+ A+ NL Sbjct: 15 SGCFAVGPDYQRPKIPI-PRQWT--ETPAVQGSQPEQWWKTFNDPILDKLISEAIASNLD 71 Query: 75 ILQATERINAAKENILSVRADLFPS--SYASISHRF------IPNLKTNSTGQ------- 119 + A ER+ A+ + A PS + +S S RF T+S G Sbjct: 72 LKLALERVKDARALRSATIAAGLPSLDAKSSASRRFNNSSSPASQTGTSSAGGGFGIGNQ 131 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 D+ W++D FG RR +ES+ A +D + ++ ++ +YI+ R Sbjct: 132 FINIFQMGFDAQWELDFFGGVRRAVESADATIDVEVENSRDVLVTLLGEVARNYIELRAN 191 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + I+I + L ++ EL+ ++ G L + + +A + E+ +P E + + ++ Sbjct: 192 QRLIAITRENLHAQQETQELTQIRQQTGLAGMLEVTQAQALAATTEAQLPNYETAVKQSI 251 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H +S LLG + + +Q P + + +P++L++ RPDIR E++LA + A Sbjct: 252 HALSVLLGKEPGALVVRLDQQGTI--PAIAANVITNLPSELLQRRPDIRRAERQLAVANA 309 Query: 291 KIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+A ++LYP ++L I L T F WS L LPIF+ GK+ +NI + Sbjct: 310 SVGVATAELYPKINLAAFIGLQNTTITDFTPVGKSWSAASSLTLPIFNWGKLNANIDSKK 369 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ ++T+Q TVL+A KEVE+AL + +++++ L AV ++ ++ L+ Y++G Sbjct: 370 AQFEQSFLTYQSTVLSAFKEVEDALIAYSKEQQRHKALAKAVAANQLAVQLANERYQKGL 429 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LD+L + A + + L ++ QLA + V LY A+G G+ Sbjct: 430 TAFLDVLTSQTALYQAQSLLVTSESQLAGNLVALYKALGGGW 471 >gi|257093349|ref|YP_003166990.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045873|gb|ACV35061.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 521 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 133/460 (28%), Positives = 235/460 (51%), Gaps = 26/460 (5%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINID--------TLKWWESFNDTSLNK 63 VLL GC VGP++ +P + LP G S + +N + T +WW +F+D L++ Sbjct: 20 VLLGGCAAVGPDFKRPAVSWLPGWS--GGSLDSLNAEQRGKPRAQTEEWWRNFSDPVLDQ 77 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG----- 118 L+ A + N + A RI A+ ++ + L+P I+ + + S+G Sbjct: 78 LIAEAQRVNPNVRTAGMRILEARAQLMIAGSLLYPQQQ-QITGTVLRTGEERSSGPDSAL 136 Query: 119 -----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L W+ID +G+ RR +E++ + ++ AQ D ++ + +++ Y R + Sbjct: 137 TAYNAGLAIGWEIDFWGKFRRSVEAADSGYFASIAQYDDLQVLMAAQVATFYCAIRTLEL 196 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R+ IAHQ L K+++E++ F G S+L + + +A+ + S IP LE S R + Sbjct: 197 RLQIAHQNAALQKRSLEITERLFKHGNDSELDVQQAKAQYLATLSTIPQLEGSLRQTQNA 256 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + +L P L M N P + + + +PADL+R RPD+R E +LA A I Sbjct: 257 LGVVLARPPGP-LSEMADGKNTI-PQAELGVIVDLPADLLRRRPDVRAVEMQLAAQSALI 314 Query: 293 GIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 G++ +DLYPS++L GS+ L+ + S W GP L +FD G++ + ++ Sbjct: 315 GVSVADLYPSIALLGSLGLSATSLSGSPRTLAWGVGPSLVWNVFDHGRLTGEVLVQDARF 374 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ Y + VL A +EV++A ++++ V L+ AV+ K+S++++ I YR+G + Sbjct: 375 QQLYEQYHGAVLQAAREVDDAAVGFAKNREQVPILEEAVKAAKRSLAIASIQYREGLANF 434 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R + L + +A+S V LY A+G G+ Sbjct: 435 ERVLDSQRTLFSQQERLVSNRGNVAQSLVALYKAMGGGWQ 474 >gi|254467519|ref|ZP_05080929.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodobacterales bacterium Y4I] gi|206684520|gb|EDZ45003.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodobacterales bacterium Y4I] Length = 465 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 133/451 (29%), Positives = 228/451 (50%), Gaps = 23/451 (5%) Query: 13 VLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 LL GCTV G +Y +P + P + S WW+ D +L++LV L Q Sbjct: 6 TLLCGCTVAGRDYQRPAFAV-PASYYQTRSYATAQGAAETWWQGLKDAALDRLVAAGLAQ 64 Query: 72 NLTILQATERINAAKE------NILSVRADLFPSSYASISHRFIPNLKTN-STGQLDSDW 124 NL I A +R+ AA+ VR DL SS + S R + T+ + ++ + + Sbjct: 65 NLDIKSARQRLKAAEAVRRASGRPEQVRGDLEGSS--AFSRRESQDGSTSLDSAEIGATY 122 Query: 125 KIDLFG--QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 DLFG QRR E ++A+ D+ + Q+ +L +I + +YI+AR F+ ++ + ++ Sbjct: 123 VFDLFGGFQRRS-ERAVADRDAQFYQMATTRLAIIDAITRTYIEARFFQRGAAVTRKTIE 181 Query: 183 LYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 L ++ + + LK + A L L + + ++ S ++D+P + V ++TLL A Sbjct: 182 LRQQILATVEELKAAR-AVLALDLERTKLQVASAKADLPGFISGYEAAVFALATLLDRDA 240 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +E MQ S QP+ +G+PA L+RNRPD+ E +L + A IG+ +++LYP Sbjct: 241 SEVFAMMQNSSG--QPHPSTQPELGVPASLLRNRPDVLLAEAQLRSATASIGVTEAELYP 298 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 SL + GSI +F G + GP L LP+F++ +++ RA + A+ ++ Sbjct: 299 SLEVTGSI-----EAFRGLPDLYQIGPSLRLPLFNRPVLRAFHERAIAEAKATEYDYRAE 353 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V A++EV+ +++ ++ AV L K L+ +R +L D+L+ E A Sbjct: 354 VRGAVEEVQAQQSALKAARERTAAQAQAVGLGGKVADLARETFRANEITLFDLLNTEEAL 413 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E+ L A+R LA ++ L IA+G G+ P Sbjct: 414 RDNELGLIAARRDLALAWSRLQIALGKGWAP 444 >gi|317047490|ref|YP_004115138.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316949107|gb|ADU68582.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 507 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 134/475 (28%), Positives = 238/475 (50%), Gaps = 47/475 (9%) Query: 18 CTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 C VGP+Y PH LP+Q + SK L WW+SFND L+ L+ A+ Sbjct: 21 CAVGPDYQPPHAQTPTSYRDLPSQEA---SKPLSAATNPLWWQSFNDPLLDSLITRAIAD 77 Query: 72 NLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP------------------- 110 NLT+ QA RI A+E + L P S A ++ + + Sbjct: 78 NLTLQQAVLRIAGAREQLAQAGGGLLPTLSGSAKVTRQQLGLKGLLESNGVYDKVDSDVA 137 Query: 111 ---NLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 N T+S G D+ W++DL+G+ RR IE + A +A Q + A +++ +++ Sbjct: 138 DQLNGLTHSVNLYQGSFDASWELDLWGKVRRQIEMANAQQQAAIEQRNDALVSLQAEVAR 197 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + + + + + ++ EL+ + G + A++ S+ + +P Sbjct: 198 AYLQLRGAQAVLQTLQEQIAIAQQTSELTQSQQRNGMAPLTDVENARAQLSSLNAQLPQY 257 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRY 280 + R ++ ++ LLG + + + + +P +P +++GIPA L R RPDIR Sbjct: 258 QAQERQAMNGLAVLLG----KTPGALDSELASVKPLPALPKLVSVGIPATLARRRPDIRQ 313 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKLYLPIFDK 337 E L A IG++ ++L+PSLSL G + + + ++ +++H +S GP L +PIF Sbjct: 314 AEATLHAQTANIGVSVAELFPSLSLTGQLGVRNTDASYLDNWSSHFYSIGPSLSIPIFQG 373 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++ SN++ A + + +++TVL A+++VENAL S D++ VT L +++ Sbjct: 374 GQLVSNVKLARAQQANAALAYRQTVLTALQDVENALVSYRADQQQVTALDETTGALQRAF 433 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ +YRQG + L++LD +R A+ + + + Q A V LY A+G G+ P Sbjct: 434 DLATDSYRQGISTFLEVLDAQRQLAQAQAQSTQVRMQTALDLVALYKALGGGWEP 488 >gi|145589051|ref|YP_001155648.1| RND efflux system outer membrane lipoprotein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047457|gb|ABP34084.1| RND efflux system, outer membrane lipoprotein, NodT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 526 Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 140/465 (30%), Positives = 240/465 (51%), Gaps = 40/465 (8%) Query: 20 VGPEYTKP-------HMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 VGP++++P + TQF S+G + N I +D ++WW+SFND +LN L+K A Sbjct: 2 VGPDFSRPSVKAGDQYQATAKTQFTESLGENSNQI-LDPVEWWQSFNDPTLNALLKQAAS 60 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTNSTGQL----- 120 QNLT+ QA RI + + A + P+ SYA+ + + + TNS G L Sbjct: 61 QNLTLQQAAIRIYQLQAQLGVTDATILPTVALSGSYANTRNSNLQEI-TNSPGNLVFNNA 119 Query: 121 --DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +W++D +G+ RR IESSL + S A A +++ + + +YI+ R+ +E I++A Sbjct: 120 VVQLNWELDFWGKARRGIESSLNSYMSGVAAFYSADVSISADVANTYINIRNNEELIAVA 179 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L L K+++ ++ +F GATS L L + +A+ + ++ IP L S + H +S LL Sbjct: 180 TTNLALQKESLRIAGARFKYGATSMLDLSQAQAQYEQTKAQIPALIASLKKTQHAMSILL 239 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G P Y +K N + +L P + +G+P DL+R RPD+ E A + IG+ Sbjct: 240 GEPP----DYYEKTYGNTKGSLKPPTELGVGMPRDLLRRRPDVLQAEFAAAAQSSLIGVN 295 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNT----HWS-----FGPKLYLPIFDKGKIKSNIRR 346 K+ L+P+ +L G+ + N F G +T W+ L LP+F +G I +R Sbjct: 296 KAQLFPTFTLGGNFGYANSN-FGGGSTGSLFSWANNSTGISAGLSLPLFYRGAIVDQVRV 354 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ Q+ + +Q VLNA KEVE++L +I+ K V V K + +++ Y+ Sbjct: 355 QDAVFQQSILAYQNLVLNAQKEVEDSLIAISTSKSSVEDYTRGVIAAKSAADMALERYKA 414 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G+ ++ +++ ++ L K YV + A+G G++ Sbjct: 415 GQNDYNTVIVAQQSLLSIQNSLVQTKSNELIGYVGAFKALGGGWS 459 >gi|254499031|ref|ZP_05111726.1| putative outer membrane protein [Legionella drancourtii LLAP12] gi|254351742|gb|EET10582.1| putative outer membrane protein [Legionella drancourtii LLAP12] Length = 481 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 129/459 (28%), Positives = 232/459 (50%), Gaps = 32/459 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ-QNLTIL 76 CTVGP Y KP PL P ++S+ + W +S D L + + AL+ NL I Sbjct: 26 CTVGPNYHKPETPL-PEKYSLAKQNSPAKKTNQFWMDSLGDPLLIRFINQALRGNNLDIQ 84 Query: 77 QATERINAAKENILSVRADLFPSSYAS-----------------ISHRFIPNLKTNSTGQ 119 +A I A+ + +AD FP AS + +P T+ Sbjct: 85 KAYANICQARAELGISKADYFPQLDASGKISRDRLSANSEILVAFPNGIVPLNYTDYKFG 144 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++D FG+ RR +E+S A SA ++ +++ Y R +++RI IA Sbjct: 145 FDASWELDFFGRIRRGVEASRARFQSAIENQANVIISTAAEVANIYTQYRVYQKRIIIAQ 204 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + Y + ++L L+ G+ + + L ++E+E+ S ++ + L+ + ++ ++ L+G Sbjct: 205 NTIKSYSETVKLVKLQMQAGSATGVDLSRVESEVLSAKATLMPLQAEAKASLAALAVLVG 264 Query: 239 -YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 YP + Q +P + IG+P+DL+ RPDI+ E+ LA + A IG+A+ Sbjct: 265 EYPESLLDKLTQTAPIPTIKPT---SLAIGLPSDLLLRRPDIKIAERDLAAATADIGVAR 321 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 ++ +P L G I D + PG + +WSFGP++ LPIF G++K+ +R E++ Sbjct: 322 ANQFPRFQLVGDIG--SDTTIPGAFFKAASGYWSFGPQVSLPIFQGGRLKNAVRAQEAAR 379 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++TVL A+ +VE++L N ++ K+Q + K + L + Y+ G+ SL Sbjct: 380 NNALANYKKTVLQALADVESSLIRYNRERLRKQKIQESYAKLKSAHRLIKLQYKTGQTSL 439 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD+ER ++E + + Q+ + + LY A+G G+ Sbjct: 440 IDVLDVERQLNQLEDQQAQSTGQVTINLIALYKALGGGW 478 >gi|77458882|ref|YP_348388.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382885|gb|ABA74398.1| outer membrane component of multidrug efflux system [Pseudomonas fluorescens Pf0-1] Length = 473 Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 29/466 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKL 64 SL ++ L+ C VGP+Y P + + N D K WW+ F+D +LN+L Sbjct: 9 SLLVLALSACAVGPDYKTPTTEAANITSATDGAAGQKNFDRSKFEGIWWQQFDDPTLNQL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTGQ---- 119 V +LQ N + A R AA+ ++R D+ + +I+ R +L K GQ Sbjct: 69 VTQSLQGNRELRVAFARWKAAR----AIRDDVSNDAMPTITSRASSDLAKGQIPGQTTKR 124 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD W++DLFG+ +R++E+S A+ +A A + ++ +I++L+ +Y R Sbjct: 125 VNSERYDLGLDMAWELDLFGRIQRNLEASDADQQAAEADLYQLQVTMIAELVDAYGQLRG 184 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R IA L+ +++ +++ G +L + + +A + S+E+ +P L+ Sbjct: 185 AQLREKIALANLNNQQESRKITISLRDAGVGDQLDVERADARLASVEASVPQLQAEQARQ 244 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I+TLLG + + S P + + IG P +L++ RPDI E+KLA + Sbjct: 245 KNRIATLLGERPDKLTVDL---SPKDLPAIAKALPIGDPGELLQRRPDILSAERKLASAT 301 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+AK+DL+P +SL+G + T W+ GP + FD G +++ +R Sbjct: 302 ARIGVAKADLFPRVSLSGFLGWTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRG 361 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ A+ T+++ VL A++E ENA + + ++ + L E +K+ L+ I YR+ Sbjct: 362 ADADAEGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRKAADLAEIRYRE 421 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G L +LD +R E + A+ L + V +Y A+G G+ P Sbjct: 422 GTTDFLVLLDAQRERLNAEDSQAQAEVDLYRGIVAIYKALGGGWQP 467 >gi|294055909|ref|YP_003549567.1| RND efflux system, outer membrane lipoprotein, NodT family [Coraliomargarita akajimensis DSM 45221] gi|293615242|gb|ADE55397.1| RND efflux system, outer membrane lipoprotein, NodT family [Coraliomargarita akajimensis DSM 45221] Length = 484 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 135/469 (28%), Positives = 246/469 (52%), Gaps = 31/469 (6%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLN 62 ++ LF L GC VG +Y +P + ++P + + + + T +WW FND L Sbjct: 5 SVLGLFG--LTGCKIVGTDYEEPEL-VMPDAWHQRLADEAEAQTVVTEQWWGQFNDPVLV 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN---- 115 LV AL NL + A ER+ A+E ++ L+PS A+ R N+ + Sbjct: 62 GLVDSALAANLDLAIAYERVVQAREAKDVSKSGLWPSVDATAGFSRERNSENVGLSPAAG 121 Query: 116 --------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 STG LD W++D+FG +R +ES+ ANL + + + +++ +YI+ Sbjct: 122 GGSTRNYYSTG-LDVAWELDVFGGVQRAVESADANLMATEESYRDFMVLLAAEVAGTYIE 180 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ER+ +A + +++++L+ +F G KL + + + + + ++ +P L++S Sbjct: 181 LRTINERMELAEANIANQEESLKLALDRFDAGLAPKLDVSQAQTNLSNTQAFLPQLKQSR 240 Query: 227 RMNVHNISTLLG-YPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ ++TLLG Y A E L + S PN + IP D++R RPDIR E+ Sbjct: 241 TAELNRLATLLGLYAADVELLLGEAEGSIPVPPNAALST---IPVDMVRARPDIRAAERS 297 Query: 285 LADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA A+IG+A +DLYP LNGS +A N + + +GP + +F+ G+++ Sbjct: 298 LAAQNARIGVAAADLYPRFFLNGSFNLLATDSSNWIDAGSRSFGWGPGVRWNLFNAGRVR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S + ES+ + Y +++ +VL A++EVEN+++ I ++ + L+ E ++++SL Sbjct: 358 SQVAIEESATRAAYYSYENSVLLAVEEVENSMSGIVNGRERLQALEQGTEAAREAVSLVK 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 NY +G ++LD ER + E + ++++ +A +YV L+ A+G G+ Sbjct: 418 ENYSRGLVDFQNVLDSERTLTQTEDNRALSQGSVASAYVGLFKALGGGF 466 >gi|330897820|gb|EGH29239.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 465 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 136/462 (29%), Positives = 238/462 (51%), Gaps = 22/462 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I SL ++ LA C VGP+Y P + S + +D WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYRAPVTAPAKLASAAQGSYDRSKVDR-AWWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKT 114 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 302 VATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADAD 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 362 AEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTAD 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L V +Y A+G G+ P Sbjct: 422 FLVLLDAERERLAAEDAQAQAEIELYHGIVAIYKALGGGWQP 463 >gi|302186718|ref|ZP_07263391.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 465 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 138/463 (29%), Positives = 241/463 (52%), Gaps = 24/463 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I SL ++ LA C VGP+Y P P + GN + +D + WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYQAPVTAPAKLASAAQGN-YDRSKVDRV-WWQQFEDPTLNKLV 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLK 113 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 66 ARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSE 124 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + Sbjct: 125 RYDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQL 183 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + Sbjct: 184 REAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQRNR 243 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TLLG + S + P + + IG P ++RNRPDIR E++LA S A+I Sbjct: 244 IATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARI 300 Query: 293 GIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 301 GVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADA 360 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 361 DAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTA 420 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L V +Y A+G G+ P Sbjct: 421 DFLVLLDAERERLAAEDAQAQAEIELYHGIVAIYKALGGGWQP 463 >gi|322832671|ref|YP_004212698.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321167872|gb|ADW73571.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 560 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 125/483 (25%), Positives = 240/483 (49%), Gaps = 52/483 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSI--------GNSKNLINIDTLKWWESFNDTSLNKLVKI 67 A C+VGP+Y KP+ P+ P+ ++ G S L + WW++FND L+ L+ Sbjct: 54 AACSVGPDYQKPN-PVTPSAYNDMTQPKDKDGASIALPSEPNPLWWKAFNDPQLDSLITR 112 Query: 68 ALQQNLTILQATERINAAKENILSVRA--------------------------------- 94 A+ N+++ QA RI A+E + Sbjct: 113 AIAGNISLQQAVLRIAGAREQVKQAEGAWLPSVQGSAKMTRQQLGLKGILDSSGASQQLD 172 Query: 95 DLFPSSYASISHRFIP-NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 DL P + +IS P NL G D+ W++DLFG RR +E++ A S+ Q + A Sbjct: 173 DLGPEASGAISTATRPVNLYQ---GNFDASWELDLFGGTRRQVEAANAQTQSSIEQRNDA 229 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +++ +++ +Y+ R + + +D+ ++ ++L+ + G + +L + A++ Sbjct: 230 LVSLEAEVARAYLQLRGAQSVTAAIQTQIDVAQQTLDLTQNRQQNGLSPQLDVENARAQL 289 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 S+ + +P + R ++ ++ LLG + + P L + +G+P+ L Sbjct: 290 GSLRAQLPQYQAQERQAMNGLAVLLGQTPGSLDAELS--APKPMPALPAAVPVGVPSQLA 347 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSF-PGYNTH-WSFGPK 329 R RPD+R E L + A IG++ + ++PS+SL G + + D S+ +++H +SFGP+ Sbjct: 348 RRRPDVRKAEADLHAATANIGVSVAQMFPSISLTGQFGMRNTDVSYLDNWSSHFYSFGPQ 407 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIF G++ S++ + + + +++TVL A+++V+NAL + D+ V+ L Sbjct: 408 ISLPIFQGGRLVSSVHLSRAQQANAALNYRQTVLTALQDVDNALVNYRTDQDQVSGLDQT 467 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + + L+ +YRQG + +++LD +R A+ + AK + + V LY A+G G Sbjct: 468 TKALQTAFDLASDSYRQGLSTFINVLDAQRQLAQAHQQSAEAKVKTSTDLVSLYKALGGG 527 Query: 450 YNP 452 + P Sbjct: 528 WEP 530 >gi|53802442|ref|YP_112818.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] gi|53756203|gb|AAU90494.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] Length = 518 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 126/460 (27%), Positives = 235/460 (51%), Gaps = 31/460 (6%) Query: 17 GCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC +GP++ +P + L T K D WW+ FND L++L++ A +QNL + Sbjct: 28 GCNKIGPDFHRPEIKLTDTWLD-APKKAAKAGDFRNWWKLFNDPVLDRLIEKAYRQNLDV 86 Query: 76 LQATERINAAKENILSVRADLFPSS--------YASISHRFIPNLKTNS--------TGQ 119 +A RI A+ + + LFP Y IS + P + + TG Sbjct: 87 QKAAIRIYQARAQLGIAKGYLFPQKQNVGMDTFYERISE-YSPYYQGSDFHTFTYFQTG- 144 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++D++G+ RR I+++ A L ++ Q D + + +++ +Y+ R F +R+++A Sbjct: 145 FDAMWELDIWGRFRRGIDAAGAELAASTLQYDDMVVTLTAEVAAAYVQIRTFNQRLALAK 204 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 DL +++ ++ +F G +++L + + +A ++ ++I LE R + + +S LLG Sbjct: 205 GNADLQERSFRVAESQFRNGLSTELDMQQAKALHQATLAEIANLEVGLRQSKNALSVLLG 264 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + S+ P I +GIP D++R RPD+R QE K A A+IGIA+S+ Sbjct: 265 MQPSHLEKELGPDSDI--PAARSEIAMGIPTDILRRRPDVRAQEYKAASQCAQIGIAESE 322 Query: 299 LYPSLSLNGSIALTHD--------NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 L P LSL G++ N+ FGP + PIF G++ +N+R ++ Sbjct: 323 LLPRLSLVGTVGFNSGSVDGLDVANAISPSGLAGKFGPTVIWPIFQYGRLTNNVRVQDAK 382 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE ++ TVL A++EVE+A+ + + ++ V L V +++ L++ Y+ G Sbjct: 383 FQELLTDYRSTVLRALREVEDAIIAFKKAEERVASLSDGVRASQRAAELALRQYQNGLED 442 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+ E + + L+ ++ +A+S + +Y A+G G+ Sbjct: 443 YTRVLNSELFLVQQQDRLTASRGDVARSVIAMYKALGGGW 482 >gi|160901087|ref|YP_001566669.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160366671|gb|ABX38284.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 501 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 130/478 (27%), Positives = 233/478 (48%), Gaps = 37/478 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS----IGNSKN---LINIDTLKWWESFNDT 59 +F + L AGC VGP+Y +P P LP + +G +K + D WW +F D Sbjct: 8 VFLMLASLCAGCAVGPDY-QPPAPALPQAYMGSRVLGETKPPSPASSTDLAAWWAAFGDP 66 Query: 60 SLNKLVKIALQQNLTILQATERI----------NAAKENILSVRADLFPSSYASISHRF- 108 + +LV ALQQNL + QA R+ AA + A SY S+ Sbjct: 67 QMARLVTAALQQNLDVAQAAGRVLQARAGLDAAAAALLPSAQISAQTA-RSYQSVETPLG 125 Query: 109 -----IPNLKTNSTGQ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +P + Q L + W++DLFG RR ++SLA ++ A +L V ++ Sbjct: 126 RVLDSMPGFDRYGSAQEANLGASWELDLFGGLRRARQASLAEYQASEAGATAVRLAVAAQ 185 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +YI R + R+++A + ++ + L+F +G + +L L ++E + ++ + Sbjct: 186 TADTYIQIRGLQARLAVARSQVQAQQQLRSIVELRFGKGLSPELQLRQVEGALARAQATV 245 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P LE + ++ + +L P T + P L + P DL+R RPD+ Sbjct: 246 PPLENALEAALNAMDVMLATAPGTHRAELADPRPVPVLPTLSL---AEAPGDLLRRRPDL 302 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPI 334 E++LA S A+IG+A ++ YP LS++G I ++ N F + S L + Sbjct: 303 IAAERRLAASNARIGVAIAEYYPKLSISGLIGSATSISAGNLFSAGASQASVVGGLRWRL 362 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+I + I +A++ E ++++VL A +EVENAL S+++ ++++T L + Sbjct: 363 FDFGRINAQIHQAQAQEAESLAAYRQSVLRATEEVENALVSLDKRQELMTVLARGADALT 422 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ + Y +G SL+++L + + V ++A+ + A+S V ++ A+G G+ P Sbjct: 423 RARQAAGAAYDKGVVSLIEVLQADESLLGVLDAQALARTESARSTVAIFKALGGGWTP 480 >gi|260597214|ref|YP_003209785.1| hypothetical protein CTU_14220 [Cronobacter turicensis z3032] gi|260216391|emb|CBA29452.1| hypothetical protein CTU_14220 [Cronobacter turicensis z3032] Length = 515 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 131/485 (27%), Positives = 242/485 (49%), Gaps = 58/485 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--------LKWWESFNDTSLNKLVKIA 68 GC VGP+Y +P P+ P F +N ++ + +WW +F L+ L++ A Sbjct: 22 GCAVGPDY-QPPSPVTPGAFGETARQNAPDVASKARNTAPDPRWWRTFKSPQLDSLIERA 80 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFIPNLKT 114 + NL++ Q RI A+E I FP+ ++ SH L Sbjct: 81 IAGNLSLQQTVLRIAGAREQINQAGGAFFPAVNGNLRATRQQLGLEGELKSHDVYGQLNN 140 Query: 115 NS-----------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 G D+ W+IDL+G+ RR +E++ A +A Q + A +++ Sbjct: 141 VDPQISSALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAADAQQKAAIEQRNDALVSL 200 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +++ R + ++ +Q + ++ +EL+ + G + +L + A++ +++ Sbjct: 201 EAEVARAWLQLRGAQSILATMNQQIASAQQTLELTESRQQSGLSPQLDVENARAQLGTLQ 260 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + +P + R ++ ++ LLG P +Q QP +P + +GIP+ L R Sbjct: 261 AQLPQYQAQERQAMNGLAVLLGKPPGALDAELQA----AQPLPALPEIVPVGIPSTLARR 316 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK 329 RPD+R E +L + A+IG++ + L+PSLSL+G + NS Y T WS FGP+ Sbjct: 317 RPDVREAEARLHAATAQIGVSVAQLFPSLSLSGQFGMR--NSETNYLTDWSSHFYSFGPQ 374 Query: 330 LYLPIFDKGKIKSNIR--RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + +PIF G++ S+++ RAE A + +++TVL A+ +VENAL S D++ L+ Sbjct: 375 VSIPIFQGGRLVSSVKLTRAEQGAAA--LQYRQTVLTALSDVENALVSYRTDQQREAGLE 432 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ + S L+ +YR+G + +++LD +R A+ E + A+ Q + V LY A+G Sbjct: 433 KTLDALQTSFELASDSYRKGIATFIEVLDAQRQLAQAEQQRAQARVQSSLDLVALYKALG 492 Query: 448 SGYNP 452 G+ P Sbjct: 493 GGWEP 497 >gi|53804520|ref|YP_113823.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] gi|53758281|gb|AAU92572.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] Length = 558 Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 127/463 (27%), Positives = 231/463 (49%), Gaps = 24/463 (5%) Query: 13 VLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIAL 69 VL GC+ +GP+Y P + P + + + D +WW F D LNKLV+ A Sbjct: 51 VLAGGCSTKIGPDYQTPETRVSPDWLESEDRRVSRKEGDFREWWRVFKDPVLNKLVETAY 110 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYA--SISHRF-IPNLKTNSTGQ------- 119 QNL + A RI ++ + +LFP S A + F +P L+ G Sbjct: 111 SQNLPLQIAAVRILGSRAELGIATGNLFPQSQAFQGQTEDFGMPLLRNLGLGDSLWYTRI 170 Query: 120 -LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + S+W+ID++G+ RR IES+ A L ++ A+ D + + + + +Y+ R ++R+ IA Sbjct: 171 GVMSNWEIDIWGKYRRAIESADAQLMASVAEYDDILVTLTADVANTYVQIRTLEKRLDIA 230 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 ++ +++ ++ KF G +++ + + + S ++ IP LE R + + LL Sbjct: 231 RHNVETQSESLRIADAKFHGGTSTQRDVEQARTVLASTQATIPVLEGQLRQAKNTLCYLL 290 Query: 238 GYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + + ++ Q P + + +GIPADL+R RPD+R E+ A A+IGIAK Sbjct: 291 GMTPEKLDEPLGGEAQFGQIPAPPVQVAVGIPADLLRRRPDVRRAERSAAAQSARIGIAK 350 Query: 297 SDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + LYP+ S++GS NS F +++FGP + +F+ G++ + +R + Sbjct: 351 ASLYPAFSISGSFGFIATNSQGHSLSDIFNWGQHYYAFGPSVQWNLFNYGQLTNQVRAQD 410 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + QE +++Q TVL A +E E+AL + + L + ++S+ L+ + YR+G Sbjct: 411 ARFQELALSYQNTVLKAQQEAESALIGFLKAQNSAQFLAESTAAAQRSLDLATLQYREGI 470 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L E+ K + + + +A + V +Y +G G+ Sbjct: 471 TDFTTVLTAEQDLLKQQDNFAQTLGNIATNLVGVYRTLGGGWQ 513 >gi|330980897|gb|EGH79000.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 465 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 135/462 (29%), Positives = 237/462 (51%), Gaps = 22/462 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I SL ++ LA C VGP+Y P + S + +D WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYRAPVTAPAKLASAAQGSYDRSKVDR-AWWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKT 114 +L N + A R+ + + V D+ P +S AS I+ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKSGRAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +SL+G + T S G + WS GP + FD G +++ IR A++ Sbjct: 302 VATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADAD 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G Sbjct: 362 AEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTAD 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L V +Y A+G G+ P Sbjct: 422 FLVLLDAERERLAAEDAQAQAEIELYHGIVAIYKALGGGWQP 463 >gi|295701080|ref|YP_003608973.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295440293|gb|ADG19462.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 504 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 127/465 (27%), Positives = 229/465 (49%), Gaps = 27/465 (5%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 R + S+ ++ L+GC +GP Y +P + + T +F+ G + + N WWE F D LN+ Sbjct: 8 RLLASVMLLALSGCLLGPNYQRPAVDVPATYRFAQGEAAGIANA---AWWEQFQDPVLNQ 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST---- 117 L+ ALQ N + A R++ + ++ R+ LFP S+ A S + + ++ + Sbjct: 65 LIATALQDNRDVKVAAARVDEFRGMFVTTRSGLFPQVSAGADASRQRVSQVEAVTVPKGV 124 Query: 118 ----GQLDS----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 Q D+ W++DLFG+ RR E++ ANL ++ L ++S + +YI+ R Sbjct: 125 SPVYNQFDATLAVSWELDLFGKVRRETEAARANLLASEEGRRATILTLVSSVASAYINLR 184 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ IA + + +++ + +F G S++ L + ++E ++ + +P LE Sbjct: 185 SLDRQLEIAKETVQSRAESVRVFEARFRYGEVSQMELAQSQSEYQAAQVTVPQLEAQIGQ 244 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +S L+G L ++ S P PI G+P++L+ RPD+ E+ L Sbjct: 245 QEDALSVLIGRNPGAILR-GRELSQMGTP----PIPEGLPSELLERRPDLLEAEQTLVAQ 299 Query: 289 VAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +PS+SL G S++ N F G WSF + PIF G I + Sbjct: 300 NALIGAARALYFPSISLTGLFGSVSAQFSNLFTGPARVWSFAGSVTQPIFTAGNITGQVH 359 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +AE+ QE ++++ + A +EVE++L S+ + + + VE L+ Y Sbjct: 360 QAEARQQEALYSYEKAIQVAFQEVEDSLISVQKTHQALDAQNLQVEALVTYARLARQRYE 419 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +++LD ER+ ++ + + + SYV LY A G G+ Sbjct: 420 GGYTSYIEVLDAERSLFNAQLSYAQTQGAVLTSYVTLYKATGGGW 464 >gi|224368738|ref|YP_002602899.1| RND efflux transporter, outer membrane lipoprotein [Desulfobacterium autotrophicum HRM2] gi|223691454|gb|ACN14737.1| RND efflux transporter, outer membrane lipoprotein [Desulfobacterium autotrophicum HRM2] Length = 513 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 239/465 (51%), Gaps = 18/465 (3%) Query: 3 ILRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFS--IGNSKNLINIDT---LKWWESF 56 +L + ++F+ L GC VGP+Y P +P +++ + + + +D+ WW Sbjct: 42 VLFVLVTVFMALSGGCVPVGPDYVAPGFNRMPGRWTPEMTGGMSAVPLDSKALASWWIVL 101 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKT 114 +D L L+ A+ NL + + + A+ +L D FP+ + AS R+ + Sbjct: 102 DDPVLTGLITRAIDVNLDLRKTRAVLREARARLLISGTDAFPTIKTDASAVRRYQDDESG 161 Query: 115 NS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +S D+ W++D+FG+ +R E++ A+L++ + ++++++++ +YI R F+ Sbjct: 162 SSYNAGFDAFWEMDVFGRVQRAREAATADLEADQESMGDVRVSLVAEVALNYIGVRSFQA 221 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R++IA + L + ++ ++L+ + G TS+L + + + ++ + +P L+ ++ Sbjct: 222 RLAIAQKSLAVQEETLQLTQWQRQAGLTSQLDVEQARSSLEETRASVPDLQTGLGQVMNQ 281 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LLG YP T + P + I +G+PA+++R P +R E++LA A+ Sbjct: 282 LALLLGQYPGTLYKALSVPAPVPVAP---MEIAVGVPAEVLRRIPTVRQAERQLAAQTAR 338 Query: 292 IGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A ++ YP +LNGSI HD F + +S GP +FD G+++ NI Sbjct: 339 VGVATAEQYPQFTLNGSIGFDALSIHDLLFESASRIFSIGPAFSWTLFDAGRLRQNIEVQ 398 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q+ I +++ VL A+K+VE+AL + ++ L A + ++ L+ Y G Sbjct: 399 NALTQQAAIEYEKAVLTALKDVEDALVAYGGEQVRRQSLLGASTAQQDALDLARDQYASG 458 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + +LD +R+ ++ L+++ + + LY A+G G+ P Sbjct: 459 MVNFQVVLDAQRSLLSLQNQLAVSNGAVTSDLIRLYKALGGGWTP 503 >gi|162147397|ref|YP_001601858.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785974|emb|CAP55555.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 482 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 136/472 (28%), Positives = 231/472 (48%), Gaps = 32/472 (6%) Query: 6 AIFSL-FIVLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A F+L + LAGCTVGP + +P + P + G+ IDT +WW SF+D L Sbjct: 9 AAFALPLAIALAGCTVGPAFHRPRIDAPPAWGAEPKAGSQTYAGAIDT-RWWRSFDDAEL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-------YASISHRFIPNLKT 114 LV +QNL + A +RI A+ + +V A P + Y +S I +L Sbjct: 68 TGLVDRLGRQNLDLQIAAQRIREARAQMKAVAAAGLPQANWSGSYAYRQLSTHGIFSLAE 127 Query: 115 NSTGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 S G L + W +DLFG RR +E+ A+ +A A A L +S L S Sbjct: 128 PSPGASLNFNLYSNVLSTSWDLDLFGAIRRGVEAQRADQSAALAARRAAALAAVSDLAAS 187 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R + + I + L + N++L +F G + L + + A++ S+ES +P LE Sbjct: 188 YMQLRGVQAQQVILQSNIALARTNLQLVRDRFANGVAANLDVSQAAAQLASMESGLPELE 247 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++ I LL P ++ +S QP L + + +G+P DL R RPDI E Sbjct: 248 NAEAALINAIGLLLSEPPRALEGELKNRSP--QPRLPVSVPVGLPLDLTRRRPDILEAEA 305 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 +L + A++G A + YP ++L G S A + S P +S GP L +P+F G Sbjct: 306 RLHAATAEVGAAIAAFYPDITLAGNMGTESFAASDFFSLPA--KQFSVGPTLNVPVFQGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + + +++ QE +TW+ TVLNA +E ++ALT+ + + + A+ + + + Sbjct: 364 RLIARLAFRKAAQQEAVLTWRNTVLNAWREADDALTAYAKSQSTHALTEQALLQDRAAYT 423 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y +G L+++ + A + L+ ++ + + V LY A+G G+ Sbjct: 424 AARQRYGEGATDYLNVVATQAALLSTQSALADSQTRSETTLVALYRALGGGW 475 >gi|332188540|ref|ZP_08390260.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332011445|gb|EGI53530.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 491 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/463 (28%), Positives = 232/463 (50%), Gaps = 34/463 (7%) Query: 17 GCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GCTVGP+Y L P Q+S+ + N D +WW SF+D L +LV+ A+ N Sbjct: 17 GCTVGPDYRPAASSELGVPDQWSV-PAANAQAQDLTRWWRSFDDPLLVELVEQAVVANTD 75 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK--------------------T 114 + QA R+ A+E+++ RA L P+ S ++ NL+ + Sbjct: 76 VAQAIARLRQARESLIQSRAALLPTVSGSTGYQRNENLRGGGRSFTLPDGTVVDTGGGGS 135 Query: 115 NS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 NS T L + +++ LFG+ RR +E++ A + A L V S+L +Y+ AR ++ Sbjct: 136 NSFTVGLSASYQVGLFGEVRRTVEATRATYEGAGFSYAATLLTVESELARNYMLARAYQA 195 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ A L L N+E++ + G S L + ++ + IP++E+ + V Sbjct: 196 QLANARASLALQDDNLEIAGFRVQAGLVSSLDAEQARSQRAQTAATIPSIEQQYNAAVSR 255 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVA 290 + L + ++ + +P P I +GIPAD++R RPD+R E+ LA + A Sbjct: 256 LGVLT----AQAPGALKSRLAAVRPIPRGPAAIGVGIPADILRRRPDVRAAERNLAAATA 311 Query: 291 KIGIAKSDLYPSLSLNGSI--ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IG+A++ LYP+L+++G+I A T S G S L IF+ G+++S +R A Sbjct: 312 RIGVAQAALYPALAISGNINTAATSLGSL-GDAITGSLFAGLTQAIFNGGRLRSQVRSAR 370 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + A++ Y +Q TVL A+++VENA+ ++N ++ + ++ + S L+ YR G Sbjct: 371 AVAEQNYAAYQGTVLLALEDVENAIVALNTARERERQFAIQLDAARNSAILARSQYRTGL 430 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E A + L A+ A + V L+ A+G G++ Sbjct: 431 TDFTTLSQQEAALLSAQNGLVQARSDAATAQVSLFAALGGGWD 473 >gi|78047099|ref|YP_363274.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035529|emb|CAJ23175.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 474 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 24/428 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ A Sbjct: 9 ALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAQSPVGNWWSQFDDPVLEQLVRDA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVARVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++R+ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKRL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L + +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 DVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + P P+ +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQQPDALDATLAARE---MPAFARPLPLGDTAGLLRQRPDVRGAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + LT D + G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLTGDAARLTEGNAKAWSVTPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+TVL A+++ ENAL + + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQTVLLALEDTENALIGYDRQQGRLAIVVEQANAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIER 419 L +LD +R Sbjct: 422 LTLLDAQR 429 >gi|85858611|ref|YP_460813.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] gi|85721702|gb|ABC76645.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] Length = 516 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 136/470 (28%), Positives = 226/470 (48%), Gaps = 36/470 (7%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++IF++ IVL LAGC VGP+Y +P + P + I + + WW+ ND +N Sbjct: 40 KSIFAILIVLVLAGCAVGPDYRRPVIES-PPAWRI-DEVEAQETANMAWWDQLNDPVMNS 97 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP---------------SSYASISHRF 108 L+ AL+QNL + AT RI+ R+ LFP A +S + Sbjct: 98 LIDEALKQNLDLKIATARIDEYIGRYWMGRSGLFPQIGVTAEAGRSRSSEEGAAPMSPQ- 156 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + N G W+IDL+G+ RR E+S A+L + L+++S + YI Sbjct: 157 VENPADFYQGFFSGSWEIDLWGKLRRATEASRADLLATQEARQAVILSLVSAVANGYITL 216 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R F ++ IA +++ +L +F G S+L L ++++E + + IP +EK Sbjct: 217 RDFDKQREIAVNTAKTREESYKLFKQRFEGGVISELELNQVKSEYEQALATIPQIEKQIV 276 Query: 228 MNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 + +S LLG P H + L +P + +G+P+DL+ NRPDIR E+ Sbjct: 277 FQENALSRLLGRNPGPIARGKHIDE---------LVLPAVPMGLPSDLLANRPDIRQAEQ 327 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A+IG+A++ +P+LSL G N F G WS+G + PIF G I Sbjct: 328 VLVAANARIGVARAQYFPALSLTGLFGQASADLSNLFTGSARVWSWGGSVAAPIFTGGAI 387 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + ++ AE+ Q+ +Q + A +EVE+AL ++ + Q V+ + + Sbjct: 388 RGQVKAAEAVRQQALFGYQRAIQTAFREVEDALVDQRRTREQLEAQQRQVDSLRDYTRFA 447 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G S +++LD ER+ E+ + L + V+LY A+G G+ Sbjct: 448 RLRYENGYTSYIEVLDAERSLFSAELTYVQTQGTLFGALVNLYKAMGGGW 497 >gi|294626586|ref|ZP_06705184.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599153|gb|EFF43292.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 474 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 214/428 (50%), Gaps = 24/428 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ A Sbjct: 9 ALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAQSPVGNWWSQFDDPVLEQLVRDA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVARVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++R+ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEMARNYFELRGTQKRL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L + +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 DVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + P P+ +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQQPDALDATLAARE---MPAFARPLPLGDTAGLLRQRPDVRGAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + LT D + G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLTGDAARLTEGNAKAWSVTPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+TVL A+++ ENAL + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQTVLLALEDTENALIGYGRQQARLAIVVEQATAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIER 419 L +LD +R Sbjct: 422 LTLLDAQR 429 >gi|325928731|ref|ZP_08189901.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325540899|gb|EGD12471.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 467 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/429 (28%), Positives = 214/429 (49%), Gaps = 24/429 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ Sbjct: 1 MALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAQSPVGNWWSQFDDPVLEQLVRD 59 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKT 114 AL N + A R+ A+ + R D P A S RF L Sbjct: 60 ALFANHDLRIAVARVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTE 116 Query: 115 NSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++R Sbjct: 117 QTTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKR 176 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + L + +L+ ++ GA S+L + A +K+IE+DIP LE + H + Sbjct: 177 LDVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRL 236 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG + + P P+ +G A L+R RPD+R E++LA + A++G Sbjct: 237 AVLLGQQPDALDATLAARE---MPAFARPLPLGDTAGLLRQRPDVRGAERRLAAATAQVG 293 Query: 294 IAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +S++G + LT D + G WS P + FD G +++ +R +++ Sbjct: 294 VATADLFPRISVSGFVGFLTGDAARLTEGNAKAWSVTPSISWAAFDLGTVRARLRASKAQ 353 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +Q+TVL A+++ ENAL + + + +++ L+ I YR+G Sbjct: 354 AEGALAQYQQTVLLALEDTENALIGYGRQQARLAIVVEQANAARRAEQLAQIRYREGSED 413 Query: 411 LLDILDIER 419 L +LD +R Sbjct: 414 FLTLLDAQR 422 >gi|294665675|ref|ZP_06730951.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604570|gb|EFF47945.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 474 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 214/428 (50%), Gaps = 24/428 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ A Sbjct: 9 ALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAQSPVGNWWSQFDDPVLEQLVRDA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVARVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++R+ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKRL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L + +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 DVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + P P+ +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQQPDALDATLAARE---MPAFARPLPLGDTAGLLRQRPDVRGAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + LT D + G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLTGDAARLTEGNAKAWSVTPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+TVL A+++ ENAL + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQTVLLALEDTENALIGYGRQQARLAIVVEQATAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIER 419 L +LD +R Sbjct: 422 LTLLDAQR 429 >gi|197117785|ref|YP_002138212.1| RND family efflux pump outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197087145|gb|ACH38416.1| efflux pump, RND family, outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 483 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/443 (27%), Positives = 229/443 (51%), Gaps = 31/443 (6%) Query: 36 FSIGNSKN--LINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 +S+G L+ +T WW +F D LN L+ AL+ N + A R+ A+ + Sbjct: 37 WSMGEEAGAPLVTAET-PWWTAFGDPLLNALIDRALRANPDVRLAEARVLEARARRGAAT 95 Query: 94 ADLFPSSYASIS------HRFIPN-LKTNSTGQL-------------DSDWKIDLFG-QR 132 L PS A S R PN + G++ D+ W++DLFG +R Sbjct: 96 GSLAPSLDARGSFTRERESRNAPNPVLVRPGGEVEPPGTENLFQAGFDASWELDLFGGKR 155 Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 R +E+ A+L+SA + L +++++ +Y + R + + +A + + + ++ L Sbjct: 156 RAVEAVQADLESALYERGGVVLTLVAEVSRNYFELRGIQRQSRLAATSVAVQRDSLALLR 215 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 +F G + L +V+ EAE++ S +P+L+ S+R +H + LLG F +Q +S Sbjct: 216 ARFAAGMATDLEVVRAEAEVERRASLLPSLDFSYRKALHRLGVLLGEAPGAFAGELQPES 275 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 P+ P+ G P+D++R RPD+R E++LA + A++G+AK+DLYP ++GS+AL Sbjct: 276 IIPVPSGMPPV--GAPSDILRQRPDLRRAERQLAAASARVGVAKADLYPRFVVSGSLALA 333 Query: 313 HDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + F ++ WS GP + PIF +G+I + I ++ Q+ I ++ +L+A+++ Sbjct: 334 SEE-FGDFSDRGSVLWSIGPSIIWPIFQRGRIVARIEVRDAQEQQALIAYRRVILDALED 392 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 +ENAL ++ L AV+ ++++ + Y+ G ++L E + + +L Sbjct: 393 MENALAGYRDEADRRAALIKAVDADRRNVVFARGRYQGGLTDFREVLVAESNLLQAQGEL 452 Query: 429 SIAKRQLAKSYVDLYIAIGSGYN 451 + ++ L + V LY A+G G++ Sbjct: 453 AQSETNLLLALVALYKALGGGWS 475 >gi|330958418|gb|EGH58678.1| outer membrane efflux protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 465 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 133/449 (29%), Positives = 236/449 (52%), Gaps = 24/449 (5%) Query: 21 GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 GP+Y P + + + + + ++TL WW+ F D +LNKLV +L N + A Sbjct: 22 GPDYKAPQTAPVKLESAAQGNYDRSKMNTL-WWQQFEDPTLNKLVARSLDGNRDLRVAFA 80 Query: 81 RINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKTNSTGQLDSDWKIDL 128 R+ +A+ V D+ P +S AS I+ R + N + G LD W++DL Sbjct: 81 RLKSARAIRDDVANDIMPVVTSRASSDIGKGQQPGITERRV-NSERYDLG-LDMAWEVDL 138 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ +R +E+S A+ D+A A + ++ +I++++ +Y R + R +IA L +K+ Sbjct: 139 FGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNLTNQQKS 198 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLH 246 +++ G ++L +V+ +A + ++E+ +P L+ + I+TLLG P T + Sbjct: 199 QDITTQLRDAGVGNELDVVRSDARLAAVEATVPQLQAEQTRQRNRIATLLGERPDTLSVD 258 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 S + P + + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL+ Sbjct: 259 L----SPSKLPAIAKALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSLS 314 Query: 307 GSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G + T S G + WS GP + FD G +++ IR A++ A+ +++ VL Sbjct: 315 GFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVL 374 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A++E ENA + N+ ++ + L E + + L+ + YR+G L +LD ER Sbjct: 375 LALEESENAFSDYNKRQQRLVALMRQSESSRAAARLASVQYREGTADFLVLLDAERERLA 434 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + A+ +L + V +Y A+G G+ P Sbjct: 435 AEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|187924110|ref|YP_001895752.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187715304|gb|ACD16528.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 513 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 137/493 (27%), Positives = 235/493 (47%), Gaps = 51/493 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ L +L GC VGP + P TQ + SK + + T +WW FND L Sbjct: 12 ALALLLCSMLTGCLVGPNFEPPQTATPDVFNRTQTAQAASKAVESGFTPQWWTLFNDPIL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN-----LK 113 + L + NL + A+ R+ ++ A+ +P+ + S+ R PN L Sbjct: 72 DSLEQQLSDANLDVAAASARLRQSRAQQRIAGAEEYPALNGAASYDRERGSPNGILSLLG 131 Query: 114 TNSTGQ-------------------------------LDSDWKIDLFGQ-RRHIESSLAN 141 TG D+ W++D +G+ RR +E++ A Sbjct: 132 VTPTGSQTQSASGSAPLGVAPLPGAKGSPAYDLYQFGFDASWELDFWGRVRRGVEAASAL 191 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 D++Y + L+ ++L YI R + + IA Q LD+ +L+ + +G T+ Sbjct: 192 SDASYEDRNAILLSARAELARDYIQLRDTQALLQIAKQNLDIAHDVTKLTQNRVHEGVTT 251 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY 260 L + A+ +SIES IPTLE ++ I LL P L M + ++ P L Sbjct: 252 DLDVANAMAQAESIESLIPTLESRNTTTINAIGVLLAKEPGA--LQQMLAEPHDV-PALP 308 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSF 317 + IG+P++L++ RPDIR E +L + A IG+AK+D YP +SLNGS L N Sbjct: 309 DQVPIGVPSELVQRRPDIRKAEAQLHAATATIGMAKADFYPRISLNGSAGFQSLQLSNLA 368 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + + GP + LPIF+ G++K + E+ QE I +Q TVL A +EV++AL + Sbjct: 369 DWASGQFVVGPSITLPIFEGGRLKGTLHLREAQQQEAAIVYQHTVLQAWREVDDALVVYD 428 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +++ +L+ V L+++++S++ Y+ G LD+L++++ + +L +K Sbjct: 429 AEQRRRDRLKTVVSLNQRALSIAQQRYKAGAVDFLDVLNVQKQLLDAQSNLEQSKADADA 488 Query: 438 SYVDLYIAIGSGY 450 + + L +G G+ Sbjct: 489 NLITLCKVLGGGW 501 >gi|30249104|ref|NP_841174.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30138721|emb|CAD85026.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 476 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 139/465 (29%), Positives = 238/465 (51%), Gaps = 30/465 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF-----SIGNSKNL----INIDTLK-WWESFNDT 59 L V+L+GC VGP+Y +P +P +P + I ++L I+ LK WW++FND Sbjct: 9 LIAVILSGCAVGPDY-RPPLPGIPDSWQAEKEEIVEQQSLSVQPIDQQVLKEWWKNFNDP 67 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHR----FIPN 111 L+ L+ AL N + A RI+ A+ ++RA LFP ++ A SH F P Sbjct: 68 RLDSLIDQALSDNFDLKIALSRIDQARAERSAIRAGLFPGVNATANAQRSHNPFPGFAPG 127 Query: 112 LKTN--STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 +K N G D+ W+IDLFG+ RR +E++ A+LD+ Q A + + + L SYI+ R Sbjct: 128 IKFNLFELG-FDALWEIDLFGRLRRQLEAASADLDAVNIQYSQALVTLTADLARSYIEYR 186 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 F+ ++ I L + EL+ F G ++ V+ A+ ++ + IP LE S Sbjct: 187 SFQNQLRITRANLAAQQTTQELTEKLFKAGVGTRYDAVRARAQTETTRAQIPDLEGSLVA 246 Query: 229 NVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L G P + + P I + P IR+RPD+ E++LA Sbjct: 247 ALRQLEMLTGQQPGALAAALSEPDAVPMAPGRTI---LASPVATIRHRPDLHIAERRLAA 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A G A ++L+P LSL+ + L + D F ++ L P+ + G+I++ I Sbjct: 304 ATALQGAAIAELFPRLSLSAFLGLRNTELDALFKSAAFSYNTAAGLLQPLLNFGRIRAGI 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A + QE Y+T+++TVL A++E E ALT +++ L +V ++++ LS + + Sbjct: 364 DLANARQQETYLTFEKTVLEALQETETALTRYLKEEIRRQALARSVMDLREAVRLSQLRF 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G S LD+LD +R E+DL+ ++ +++ + +Y +G G Sbjct: 424 QVGTVSFLDVLDAQRTLYSAEIDLARSETKVSTDLITVYKTLGGG 468 >gi|302341464|ref|YP_003805993.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301638077|gb|ADK83399.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 488 Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 27/458 (5%) Query: 16 AGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKLVKIAL 69 AGC VGP+Y P P P + + L +WW F+D L +L+ +L Sbjct: 21 AGCAAVGPDYQAPS-PQTPPAWRATMTGGLEAATPQAQALAQWWARFDDPLLTELIGQSL 79 Query: 70 QQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQ------- 119 NL I A ++ A+ +A L+P + A S R N ++ S GQ Sbjct: 80 AGNLDIKTARAKVRQARAARGLSQAALWPELSADGAFESRRASENSRSGSGGQYDLYSGG 139 Query: 120 LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W+ID+FG RR +E++ A+L++A A + +++ ++ +Y++AR ++ R++ Sbjct: 140 FDAGWEIDIFGGARRGVEAAQADLEAAQADLRDVWVSICAETARNYVEARTYQARLAAMR 199 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L+ K L + G +++L+L + ++S + +P L+ ++++++ L G Sbjct: 200 ANLEAQTKTHALIAARRAAGLSNELALRQAGYNLESSRAQLPGLQAGLESSLNSLAILAG 259 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P + LH + P + +G+PA+ +R RPDIR E++LA A++G+A + Sbjct: 260 RTPGS--LHQRLAEVRPI-PQCPPRVAVGVPAEALRQRPDIRAAERRLAAQTARVGVATA 316 Query: 298 DLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 LYP L L GSI L +S F + W GP + IFD G ++ NI +SS QEQ Sbjct: 317 ALYPKLRLLGSIGLESVSSGELFSAASQAWGIGPAVSWKIFDAGAVRQNI-AIQSSLQEQ 375 Query: 355 Y-ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +Q+ VL A+ EVE+ LT+ ++ L AVE +++ +++ YR G + Sbjct: 376 ALLAYQKAVLAALAEVEDNLTAYAREQLRAQSLAKAVEEARRAEAIAQDQYRAGLVDFNN 435 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R+ +++ L+ ++ + + +Y A+G G+N Sbjct: 436 VLEAQRSLLQLQDQLAQSRGAVTSDLITVYKALGGGWN 473 >gi|217978579|ref|YP_002362726.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] gi|217503955|gb|ACK51364.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] Length = 500 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 135/474 (28%), Positives = 235/474 (49%), Gaps = 39/474 (8%) Query: 10 LFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINI---------DTLKWWESFNDT 59 L + + GC +VGP++T P PLLP +G + WW +F+D Sbjct: 14 LACLTIGGCYSVGPDFTAPD-PLLPRTSFLGKPEPRAEPEPPRLSEQGSGADWWRTFHDK 72 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 +L L + NL I AT R+ ++ V + FPS S++ Sbjct: 73 TLTSLAERVAGANLDIASATVRLGESRAQRGVVASAAFPSINGQASYQRELYSKNGILSL 132 Query: 109 ------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLD-SAYAQVDIAKLNVISKL 160 P + TG D+ W++D++G+ RR +ES+ A+L+ S Y + DI ++ +++L Sbjct: 133 AGPNINAPPISVWQTG-FDASWELDIWGRVRRQVESADASLEASEYQRRDIL-VSTLAEL 190 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ R + +I+I + L +EL+ + +G TS L + A ++SI++ +P Sbjct: 191 ARDYVTLRGAQAQIAILTENLKSASDILELTRTRTAKGLTSDLDVQNAAALVESIKAQLP 250 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ +N + IS +L P + MQ +S P +G+P++L R RPDIR Sbjct: 251 ALQNDVDVNANAISFILDEQPGSLKGELMQAKSRIPAPPRP---PLGVPSELARRRPDIR 307 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG+A +D YPS+ LNG++ AL N + G + + FGP + LPIF+ Sbjct: 308 AAEAQLHATTADIGVAVADFYPSVKLNGNLVLNALDAKNLWKGSSLQYQFGPSVSLPIFE 367 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++KS + QE I + +TVL+A E+ NAL + + +++ L+ V+ ++ Sbjct: 368 AGRLKSTLDLRSQQQQEAAIAYHKTVLSAWHEIVNALNAYSSEQRRRDSLKAQVDHASQA 427 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++S Y G L +LD +R + + + ++ S + LY A+G G+ Sbjct: 428 LAISRTRYNNGVADFLTVLDAQRTVLQAMQQQAQSTTNVSISLIQLYKALGGGW 481 >gi|170720060|ref|YP_001747748.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169758063|gb|ACA71379.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 483 Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 131/467 (28%), Positives = 239/467 (51%), Gaps = 29/467 (6%) Query: 10 LFIVLLAGCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L VL+AGCT+GP++ +P P P Q S+ L+WWE+F+D L+ L+ Sbjct: 11 LLAVLMAGCTLGPDFKRPASQAPQQWAPLQGQAAPSQPQAEALELRWWETFHDARLSALI 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFI--PNLKTNS 116 + ++NL + A+ R+ ++ +V AD PS S A S + P+ K Sbjct: 71 QQVAERNLDLQIASARLLQSRALRSTVAADQAPSVDVDGGYSRARNSAEGLSDPSGKAGK 130 Query: 117 T------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R Sbjct: 131 SAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRA 190 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + +++LS + +G ++L + + A++ SIE+ +P+LE + R + Sbjct: 191 VQHTLDVTRDNLKVARHSLKLSQDRQAEGVATRLDVAQASAQVASIEARLPSLE-ARRDD 249 Query: 230 VHNISTLLGYPATEFLHYMQKQ--SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + N +LL A E +Q Q P IG+P++L RPDIR E +L Sbjct: 250 LINALSLL---AAEPPRSLQAQLLEGGELPAPQQQFAIGLPSELAERRPDIRQAEARLHA 306 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNI 344 + A IG+AK+D YPS+ L+GS+ + F +++ ++FGP+L LPIF+ G++K + Sbjct: 307 ATASIGVAKADFYPSIRLSGSVGFQAMQLSDFGAWDSRRFAFGPQLSLPIFEGGRLKGTL 366 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 E+ QE + +++ VL A E+++ L N + L AV ++ ++ + Y Sbjct: 367 ALREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQY 426 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G L++L ++ A E + ++++ V LY A+G G+ Sbjct: 427 VEGAVDFLNVLTVQSALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|104783518|ref|YP_610016.1| multidrug efflux MFS outer membrane protein [Pseudomonas entomophila L48] gi|95112505|emb|CAK17232.1| putative multidrug efflux MFS outer membrane protein [Pseudomonas entomophila L48] Length = 485 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 131/470 (27%), Positives = 238/470 (50%), Gaps = 35/470 (7%) Query: 10 LFIVLLAGCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L VLLAGCT+GP++ P P Q S+ + L+WW+SF+D L+ L+ Sbjct: 18 LLAVLLAGCTLGPDFQSPASEAPQDWASLQGEAAASQPVAEPLELRWWDSFHDPRLSALI 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------PNLKTNS 116 + ++NL + A+ R+ ++ +V AD PS A+ + P+ K Sbjct: 78 QKVTERNLDLRMASARLLQSRALRSTVAADEAPSVDANAGYSRARNSAEGLNDPSGKAGK 137 Query: 117 T------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R Sbjct: 138 SAYNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRA 197 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + +++LS + +G ++L + + A++ SIES +PTLE + R + Sbjct: 198 VQHTLDVTQDNLKVARHSLKLSEDRQAEGVATRLDVAQASAQVASIESRLPTLE-ARRDD 256 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-----INIGIPADLIRNRPDIRYQEKK 284 + N +LL A E +Q P +P IG+P++L RPDIR E + Sbjct: 257 LINALSLL---AAEPPRSLQ---GELLPTGELPAPRQRFAIGVPSELAERRPDIRQAEAR 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIK 341 L + A IG+AK+D YPS+ L+GS+ + F +++ ++FGP+L LPIF+ G++K Sbjct: 311 LHAATASIGVAKADFYPSIRLSGSVGFQAMQLSDFGAWDSRRFAFGPQLSLPIFEGGRLK 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + E+ QE + +++ VL A E+++ L N + L AV ++ ++ + Sbjct: 371 GTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQ 430 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y +G L++L ++ A E + ++++ V LY A+G G+ Sbjct: 431 RQYMEGAVDFLNVLTVQSALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 480 >gi|87310275|ref|ZP_01092406.1| outer membrane efflux family protein [Blastopirellula marina DSM 3645] gi|87287024|gb|EAQ78927.1| outer membrane efflux family protein [Blastopirellula marina DSM 3645] Length = 531 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 128/451 (28%), Positives = 225/451 (49%), Gaps = 22/451 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWE-SFNDTSLNKLVKIALQQNL 73 G VGP Y P +P+ + + K +I +D WW SFND LN+LV A QNL Sbjct: 44 GFKVGPNYRTPAVPVA-QDWIDSDDKRVIGDPVDAAAWWSTSFNDPVLNQLVTEAYNQNL 102 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---------TGQLDSDW 124 T+ QA RI A+ +FP S ++ NL T + +G W Sbjct: 103 TVRQAGARIMQARALRAIAVGSMFPQQQ-DFSAQYSHNLVTGAGFDRHFSSWSGSFGLAW 161 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++D +G+ RR +ES+ A+LD+A + +++ + +YID R + R+ + ++ Sbjct: 162 EVDFWGRYRRAVESADADLDAAVYDYGDVVVTLVADVAQTYIDIRTLQTRLELVKLNVEN 221 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K EL+ ++F G +S++ + + ++ + E+ +P LE S R + + + L G P Sbjct: 222 QRKTYELTEIRFVNGESSEVDVQQAKSSLVQTEALVPQLEISLRQSQNQLCVLFGAPPEW 281 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + PN+ I +GIPA + RPD+R E++LA A IG+A+S+LYP + Sbjct: 282 IVDMLGAGE---IPNVKPEIALGIPAATLLQRPDVRRSERQLASQSALIGVAESELYPHI 338 Query: 304 SLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L+G++ + + + F + S GP L I + G+I NI ++ QE +Q+ Sbjct: 339 TLSGTVGRSGNQFKDLFRTGSGFGSVGPSLDWNILNYGRIAGNIHFQDARFQELLAAYQQ 398 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG-RYSLLDILDIER 419 TVLNA E ENA+ + ++ + A E K+ L + + +G + ++ Sbjct: 399 TVLNANLEAENAIVGFLKAQEQLRLQLEAAEAADKTNQLITLQFEEGEEIDFNRVFSVQN 458 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + EV ++AK +A+ V +Y ++G G+ Sbjct: 459 TKTQQEVAAAVAKGNVAQGVVAIYRSLGGGW 489 >gi|52840899|ref|YP_094698.1| major facilitator superfamily multidrug-efflux transporter [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628010|gb|AAU26751.1| multidrug efflux MFS outer membrane protein (RND family) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 479 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 240/478 (50%), Gaps = 38/478 (7%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHM------PLLPTQFSIGNSKNLINIDTLKWWESFN 57 R + LF I L GCTVGP+Y +P + P + I +S + L WW++F+ Sbjct: 3 RKLALLFSISCLFGCTVGPDYQRPDIKIQEKWPTSKVEKKISSSAPV----HLTWWKAFH 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIP 110 D L++ + A NL I A RI A+ A+ +P S IS + Sbjct: 59 DPLLDRYINEAATNNLDIKAAEARIRQARAMKQISLANFYPQINGSASANSLQISKGTLE 118 Query: 111 NLKTNSTG-------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + NS D+ W++DLFG+ RR +E+S A+L+ AY L+ Sbjct: 119 GIFANSPTYTLIDRNQWIYNLGFDAQWELDLFGKTRRKVEASKASLEEAYESRRTILLST 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SYI+ R ++ IA + ++L +K + L ++ G +S++ + E ++K+ E Sbjct: 179 IAEIARSYIELRGAQQLYGIAQKNVELQRKTLALVRQRYKAGVSSEVDVSLAEGQLKNTE 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P ++N + I+ +LG L + K + +P +P+ G+ +D++R RP Sbjct: 239 SVLPNYITQIQVNAYQIAVMLGKDPQTILKDIAKMQSLPKPPQKVPM--GLRSDILRQRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHWSFGPKLYL 332 DIR E++LA +VA+IG+A +D +P +L+ S + + D F + W GP++ L Sbjct: 297 DIRATERQLASAVAEIGVAVADFFPQFNLSVSNLAFQSTSVDTLFQSSSGFWLMGPQVSL 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+I++N+ ++ AQ+ I +++ +L A++E ++AL ++ L+ A+ Sbjct: 357 PIFRGGQIRANVESKKAVAQQAAIQYKKIILQALQEAQSALARYSQSLDTNHSLRAAIIA 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+++ + ++ G L +L E A E ++ + + LY A+G G+ Sbjct: 417 NKRAVQFAKKRFQYGEDDYLSLLQSEAALLNAETQEVNSEVSSLTALISLYKALGGGW 474 >gi|209515073|ref|ZP_03263942.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209504699|gb|EEA04686.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 504 Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 227/465 (48%), Gaps = 27/465 (5%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 R + S+ ++ L+GC +GP Y +P + + T +F+ G + + N WWE F D L++ Sbjct: 8 RLLASVMLLALSGCLLGPNYERPAVDVPATYRFAQGEAAGIANA---TWWEQFQDPVLDQ 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI--------PNLK 113 L+ ALQ N + A R++ + ++ R+ LFP S+ A S + + P Sbjct: 65 LIAAALQDNRDVKVAAARVDEFRGQFVTTRSGLFPQVSAGADASRQRVSQDEGVPVPKGV 124 Query: 114 TNSTGQLDS----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + Q D+ W++DLFG+ RR E++ ANL ++ L ++S + SYI+ R Sbjct: 125 SPIFNQFDATLAVSWELDLFGKVRRETEAARANLLASEEGRRATILTLVSSVASSYINLR 184 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ IA + + +++ + +F G S++ L + ++E ++ IP LE Sbjct: 185 SLDRQLEIAKETVQSRAESVRVFEARFRYGEVSQMELAQSQSEYQAALVTIPQLEAQIAQ 244 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +S L+G L ++ + P PI G+P+DL+ RPD+ E+ L Sbjct: 245 QEDALSVLIGRNPGAILR-GRELAQMGTP----PIPEGLPSDLLERRPDLLEAEQTLVAQ 299 Query: 289 VAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +PS+SL G S++ N F G WSF + PIF G I + Sbjct: 300 NALIGAARALYFPSISLTGLFGSVSAQFSNLFTGPARVWSFAGSVTQPIFTAGNITGQVH 359 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +AE+ QE ++++ + A +EVE++L S+ + + + VE L+ Y Sbjct: 360 QAEARQQEALYSYEKAIQVAFQEVEDSLISVQKTHEALDAQNLQVEALITYAHLARQRYE 419 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +++LD ER+ ++ + + + SYV LY A G G+ Sbjct: 420 GGYTSYIEVLDAERSLFNAQLSYAQTQGAVLTSYVTLYKATGGGW 464 >gi|261341407|ref|ZP_05969265.1| RND efflux system, outer membrane lipoprotein, NodT [Enterobacter cancerogenus ATCC 35316] gi|288316724|gb|EFC55662.1| RND efflux system, outer membrane lipoprotein, NodT [Enterobacter cancerogenus ATCC 35316] Length = 507 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 242/482 (50%), Gaps = 41/482 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLV 65 + ++LL GC VGP+Y +P P G+ SK + +WW++F L+ LV Sbjct: 10 MIMMLLVGCAVGPDYQQPAPPPSGHWNDKGDGEVKSKTVSAATNPRWWKTFGSPQLDSLV 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFI-- 109 + A+ NL++ Q RI A+E I +P+ ++ SH Sbjct: 70 ERAIAGNLSLQQTVLRIAGAREQINQAGGAFYPAVNGNLQATRQQLGLEGELKSHGVYDQ 129 Query: 110 -----PNLKTN----------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 P L+ G D+ W+IDL+G+ RR +E++ A A Q + A Sbjct: 130 LDNVDPQLRGALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAAEAQQKVAIEQRNDAL 189 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +++ +++ +++ R + I+ + ++ ++ +EL+ + G + ++ + A++ Sbjct: 190 VSLEAEVARAWLQLRGAQSIIATLNTQIESAQQTLELTDSRQRGGLSPQMDVENARAQLG 249 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 ++E+ +P + R ++ ++ LLG P +Q S P L + GIP+ L R Sbjct: 250 NLEAQLPQYQAQERQAMNGLAILLGKPPGALDAELQ--SAQPMPTLPDIVQTGIPSTLAR 307 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKL 330 RPD+R E +L + A+IG++ ++L+PS +L+G L + N +++H +SFGP++ Sbjct: 308 RRPDVRQAEAQLHAATAEIGVSVAELFPSFTLSGQFGLRNSETNWLTDWSSHFYSFGPQV 367 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIF G++ S+++ A + + +++TVL A+ +VENAL S D++ L + Sbjct: 368 SIPIFQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVSYRTDQQREAGLAKTI 427 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ +YRQG S +D+LD +R A+ + + A+ Q A LY A+G G+ Sbjct: 428 DALQNAFDLASDSYRQGIASFIDVLDAQRQLAQAQQQRAQAQVQSALDLAALYKALGGGW 487 Query: 451 NP 452 P Sbjct: 488 EP 489 >gi|258543602|ref|YP_003189035.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256634680|dbj|BAI00656.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256637736|dbj|BAI03705.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256640790|dbj|BAI06752.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256643845|dbj|BAI09800.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256646900|dbj|BAI12848.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256649953|dbj|BAI15894.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256652943|dbj|BAI18877.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655997|dbj|BAI21924.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 529 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 127/488 (26%), Positives = 236/488 (48%), Gaps = 52/488 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN---LINIDTLK-----WWESFNDTSLN 62 + +LAGC VGP+Y KP P+Q+ K+ L+++ T + WW FND L Sbjct: 32 LVFMLAGCMVGPDYKKPDT-WSPSQWQRAADKDTSQLLSVPTTQAPDPQWWAIFNDPELT 90 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-----------FIPN 111 L K QNL + QATE+ ++ +L A+ FP AS S+R + Sbjct: 91 SLEKRLADQNLDVQQATEQFAVSRGQLLLAGAERFPDLAASGSYRRAQYSSKQLQRIVER 150 Query: 112 LKTNSTGQ------------------------LDSDWKIDLFGQ-RRHIESSLANLDSAY 146 + N+ G L + W+IDL+G+ RR E++ A + + Sbjct: 151 IGENAAGTGMGEMLSAQSSSISIPLLNQWQDGLQASWEIDLWGRVRRQYEAAKAYMKATM 210 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 + + ++L Y+ R+ +E++ I + D + ++LS ++ G S+L + Sbjct: 211 EERRGILIARQAELASDYMTLRNLQEQLRITKENRDAASEILQLSSSRYKSGLVSELDVD 270 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 +E++ + IP E+ M ++ I+ L+G P ++K + + + +G Sbjct: 271 SARSEVERTSALIPQFEQRIAMQINAINLLMGAPPGGLNTELEKTAGIP--PVPPQVPVG 328 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNT 322 +P++L RPDIR ++L + A++G A++D YP ++++ D F + Sbjct: 329 LPSELAERRPDIREAGEELHAATAEVGQAEADFYPKVTIDAGFGFQSFSFRDMGF-WSSR 387 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ GP + LPIF G++ + ++S + + +++TVLNA KEV+NALT+ ++K Sbjct: 388 MWNVGPAITLPIFQGGRLTGQLHMKKASQKAAALRYRKTVLNAWKEVDNALTAYQAEQKR 447 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +++ V +S+ L+ Y+ G S L +LD +R + + L+ + ++ + V L Sbjct: 448 NQNIRNQVAADARSLELAQSQYKHGLQSYLQVLDTQRRLLQSQTQLADSTATMSSNLVQL 507 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 508 YNALGGGW 515 >gi|149186298|ref|ZP_01864611.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. SD-21] gi|148829887|gb|EDL48325.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. SD-21] Length = 480 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 143/478 (29%), Positives = 241/478 (50%), Gaps = 44/478 (9%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 R I ++F LAGC TVGP+Y +P + T + S + + + WW + D L + Sbjct: 8 RWIAAVFSAGLAGCATVGPDYERPPIEATATDWIDRESVPVAEAEFIAWWRNLGDPVLTR 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIP 110 LV+ +LQ NLTI QA R+ A+ +RA PS A S IP Sbjct: 68 LVEASLQDNLTIRQALLRVEEARARRAQIRASALPSVGADASVTALQQSLNANPGFAQIP 127 Query: 111 NLKT-----NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + + G L W+IDL+GQ RR +E+ A ++ A A + A+L V + +Y Sbjct: 128 GFQRELEIYDVGGSLA--WQIDLWGQTRRALEAGDARIEGAIAAANGARLAVAIETASTY 185 Query: 165 IDARHFK-ER----ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + ++ ER SIA Q ++ + LS+++ +G S+ L+ +E+E+ IE+++ Sbjct: 186 LALIGYQSERGALLASIAAQ-----RELLALSNIQLREGEISRADLLLVESELARIEAEL 240 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P L+ R + L+G P E + + N L +P+ G+ ADL+R RPDI Sbjct: 241 PRLDVEIRAAALALGPLIGGLPEREI--ALATEDRNEVALLDVPV--GLRADLLRRRPDI 296 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLP 333 E++LA A+IG+A+++L+P L LN SIAL D F G +T +S P L Sbjct: 297 ARAERELAAETAEIGVARAELFPQLRLNAAGGFSSIAL--DTLFDGDSTSYSIVPFLSWR 354 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F+ G+I++ I A+ A+ + +++++L A++E E A+ + ++ + + A L Sbjct: 355 VFEGGRIRAEIDLAQLEARRAALAYEQSILTALEETETAIARYDLGREALALSERAATLS 414 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ I ++ G L + + ER E +IA RQ + + LY A+G G+ Sbjct: 415 AENYRLARIQFQYGAIDQLRLQEAERGLRNAERGRAIAYRQASLAMAGLYAALGGGWQ 472 >gi|187923686|ref|YP_001895328.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187714880|gb|ACD16104.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 512 Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 136/493 (27%), Positives = 235/493 (47%), Gaps = 51/493 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ L +L GC VGP + P T+ + SK + + T +WW FND L Sbjct: 12 ALALLLCSMLTGCLVGPNFEPPQTATPDVFNRTRSAQAASKAVESGFTPQWWTLFNDPIL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN-----LK 113 + L + NL + A+ R+ ++ A+ +P+ + S+ R PN L Sbjct: 72 DSLEQQLSDANLDVAAASARLRQSRAQQRIAGAEEYPTLNGAASYDRERGSPNGILSLLG 131 Query: 114 TNSTGQ-------------------------------LDSDWKIDLFGQ-RRHIESSLAN 141 TG D+ W++D +G+ RR +E++ A Sbjct: 132 VTPTGSQTQSASGSAPLGVAPLPGAKGSPAYDLYQFGFDASWELDFWGRVRRGVEAASAL 191 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 D++Y + L+ ++L YI R + + IA Q LD+ +L+ + +G T+ Sbjct: 192 SDASYEDRNAILLSARAELARDYIQLRDTQALLQIAKQNLDIAHDATKLTQNRVHEGVTT 251 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY 260 L + A+ +SIES IPTLE ++ I LL P L M + ++ P L Sbjct: 252 DLDVANAMAQAESIESLIPTLESRNTTTINAIGVLLAKEPGA--LQQMLAEPHDV-PALP 308 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSF 317 + IG+P++L++ RPDIR E +L + A IG+AK+D YP +SLNGS L N Sbjct: 309 DQVPIGVPSELVQRRPDIRKAEAQLHAATATIGMAKADFYPRISLNGSAGFQSLQLSNLA 368 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + + GP + LPIF+ G++K + E+ QE I +Q TVL A +EV++AL + Sbjct: 369 DWASGQFVVGPSITLPIFEGGRLKGTLHLREAQQQEAAIVYQHTVLQAWREVDDALVVYD 428 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +++ +L+ V L+++++S++ Y+ G + LD+L++++ + L +K Sbjct: 429 AEQRRRDRLKTVVSLNQRALSIAQQRYKAGAVNFLDVLNVQKQLLDAQSKLEQSKADADA 488 Query: 438 SYVDLYIAIGSGY 450 + + L +G G+ Sbjct: 489 NLITLCKVLGGGW 501 >gi|226941844|ref|YP_002796918.1| OprM [Laribacter hongkongensis HLHK9] gi|226716771|gb|ACO75909.1| OprM [Laribacter hongkongensis HLHK9] Length = 481 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 124/457 (27%), Positives = 225/457 (49%), Gaps = 18/457 (3%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +L+ GC +GP+Y +P M L P + + I + WW FND +LN L AL Sbjct: 13 LALLMTGCAIGPDYQRPVMEL-PDSYGTPAGSPELRI-SRDWWTQFNDPALNALEDRALN 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTG----------Q 119 N + A RI A+ + S ADL P A + R +L +++TG Sbjct: 71 YNRDLAAAVARIEQAQAQLTSATADLLPQLNAGADATRGRNSLYSSTTGTNPVMDSYQAS 130 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + +++DL+G+ RR+ E++LA+L ++ A D L+V S + +Y R + E++ I+ Sbjct: 131 LAASFELDLWGKLRRNREAALASLRASEAARDTVALSVTSSVADAYFQLRTYDEQLDISR 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L ++ +++ ++ G S+L + EAE + +P E++ + L+G Sbjct: 191 RTLKSREEALQIYAKRYHGGLISELDYRQAEAETATARVAVPRYEQAVSQAETALKVLVG 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 E + + P+ G P+ L+ RPD+ E++L + A+IG+A++ Sbjct: 251 ANPREVFEAEVPRGEELSRIVVPPVLPDGTPSTLLLARPDLVSAEQQLVAANARIGVARA 310 Query: 298 DLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS+SL G++ L F G W++G L +PIF+ GK + ++ A + +E Sbjct: 311 AYFPSISLTGAVGSASLALGELFTGPAALWNYGGALAMPIFNWGKTGAGVKAATAQQKEA 370 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ V NA ++ +ALT+ + + + V +++ L+ + Y G S LD+ Sbjct: 371 LANYELAVQNAFRDTRDALTAQQKSAEQLAAQDTQVNALQRTAHLARLRYENGYSSYLDV 430 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD ER+ E+D + A+ + V +Y A+G GY+ Sbjct: 431 LDAERSLFSSELDRANARLARLNAAVSVYRALGGGYD 467 >gi|148360684|ref|YP_001251891.1| multidrug efflux MFS outer membrane protein [Legionella pneumophila str. Corby] gi|296106251|ref|YP_003617951.1| multidrug efflux MFS outer membrane protein [Legionella pneumophila 2300/99 Alcoy] gi|148282457|gb|ABQ56545.1| multidrug efflux MFS outer membrane protein (RND family) [Legionella pneumophila str. Corby] gi|295648152|gb|ADG23999.1| multidrug efflux MFS outer membrane protein [Legionella pneumophila 2300/99 Alcoy] Length = 479 Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 240/478 (50%), Gaps = 38/478 (7%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHM------PLLPTQFSIGNSKNLINIDTLKWWESFN 57 R + LF I L GCTVGP+Y +P + P + I +S + L WW++F+ Sbjct: 3 RKLVLLFSISCLFGCTVGPDYQRPDIKIQEKWPTSKVEKKISSSAPV----HLTWWKAFH 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIP 110 D L++ + A NL I A RI A+ A+ +P S IS + Sbjct: 59 DPLLDRYINEAATNNLDIKAAEARIRQARAMQQISLANFYPQINGSASANSLQISKGTLE 118 Query: 111 NLKTNSTG-------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + NS D+ W++DLFG+ RR +E+S A+L+ AY L+ Sbjct: 119 GIFANSPTYTLIDRNQWIYNLGFDAQWELDLFGKTRRKVEASKASLEEAYESRRTILLST 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SYI+ R ++ IA + ++L +K + L ++ G +S++ + E ++K+ E Sbjct: 179 IAEIARSYIELRGAQQLYGIAQKNVELQRKTLALVRQRYKAGVSSEVDVSLAEGQLKNTE 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P ++N + I+ +LG L + K + +P +P+ G+ +D++R RP Sbjct: 239 SVLPNYITQIQVNAYQIAVMLGKDPQTILKDIAKIQSLPKPPQKVPM--GLRSDILRQRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHWSFGPKLYL 332 DIR E++LA +VA+IG+A +D +P +L+ S + + D F + W GP++ L Sbjct: 297 DIRATERQLASAVAEIGVAVADFFPQFNLSVSNLAFQSTSVDTLFQSSSGFWLMGPQVSL 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+I++N+ ++ AQ+ I +++ +L A++E ++AL ++ L+ A+ Sbjct: 357 PIFHGGQIRANVESKKAVAQQAAIQYKKIILQALQEAQSALVRYSQSLDTNHSLRAAIIA 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+++ + ++ G L +L E A E ++ + + LY A+G G+ Sbjct: 417 NKRAVQFAKKRFQYGEDDYLSLLQSEAALLNAETQEVNSEVSSLTALISLYKALGGGW 474 >gi|170696138|ref|ZP_02887273.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170138953|gb|EDT07146.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 512 Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 130/493 (26%), Positives = 235/493 (47%), Gaps = 53/493 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL------INIDTLKWWESFNDTS 60 + +L +LL+ C VGP + +P + P FS S D+ WW+ ND + Sbjct: 13 LATLLGMLLSACMVGPNFERPQTAV-PDVFSRTQSAQAPSRAIEAGFDS-DWWKLLNDPT 70 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF------------ 108 L+ L + NL + A+ R+ ++ V AD +P+ A+ S+ Sbjct: 71 LDSLEQRLTDANLDVAAASARLRQSRAQQRIVGADEYPTVSAAASYNRERGSMNGILSLL 130 Query: 109 ----------------------IPNLKTNSTGQL-----DSDWKIDLFGQ-RRHIESSLA 140 +P K + L D+ W++D +G+ RR +E++ A Sbjct: 131 GVTPTGSQSQSASGASPTGVAPLPGDKGSPAYDLYQFGFDASWELDFWGRVRRGVEAATA 190 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 +++Y + L+ ++L Y+ R + + IA Q L++ + +L+ + +G T Sbjct: 191 VSNASYEDRNFVLLSARAELARDYVQLRDTQALLEIAQQNLEIARDATKLTETRVREGVT 250 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + L + A+ SIES IPTLE + +++I LLG E + + P L Sbjct: 251 TNLDVANAAAQAASIESLIPTLEANCETTINSIGLLLGMQPGELQQTLS--ARGAVPKLP 308 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSF 317 + IG +++++ RPDIR E +L + A IG+AK+D YP +SLNGS L N Sbjct: 309 NNVPIGFASEVVQRRPDIRRAEAQLHAATAAIGMAKADFYPRISLNGSAGFQSLQLSNLA 368 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + + GP + LPIF+ G++K + E+ QE I ++ TVL A +EV++AL + Sbjct: 369 DWASGQFVIGPSITLPIFEGGRLKGTLHLREAQQQEAAIVYKRTVLAAWREVDDALVLYD 428 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +++ +LQ V L++ ++S++ Y+ G LD+L++++ + +L + A Sbjct: 429 AEQRRNERLQQVVRLNQSALSIARQRYKAGAVDFLDVLNVQKQLLDAQSNLERSTANAAT 488 Query: 438 SYVDLYIAIGSGY 450 + + L A+G G+ Sbjct: 489 NLITLCKALGGGW 501 >gi|259908973|ref|YP_002649329.1| RND efflux system, outer membrane lipoprotein, NodT [Erwinia pyrifoliae Ep1/96] gi|224964595|emb|CAX56108.1| RND efflux system, outer membrane lipoprotein, NodT [Erwinia pyrifoliae Ep1/96] Length = 515 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 240/480 (50%), Gaps = 50/480 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC +GP+Y P P +P F + +K L + WW++FND L+ L++ A+Q Sbjct: 22 LSGCVLGPDYQPPR-PAMPEVFNSMQAQQGAKPLASATRADWWKAFNDPQLDSLIERAVQ 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--------------------- 109 NL++ QA RI A++ + R PS S + RF Sbjct: 81 GNLSLQQAVLRIAGARQQLNQARGAWAPS--VSSNARFTRQQLGVKGELESQGIDDRLNG 138 Query: 110 --------PNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 P L + G D+ W++DL+G+ RR +E + A + + + A + Sbjct: 139 VDNADSVRPALDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSAEERNDALV 198 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ +Y+ R + +D+ ++ ++L+ + G + ++ A++ S Sbjct: 199 SLEAEVARAYLQLRGAQAITQTIETQIDVAQQTLDLTQSQQRNGLAPQTNVENARAQLSS 258 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P + ++ ++ L G P +++ P L +++G+P++L R Sbjct: 259 LRAQLPQYQAQIHQAMNGLAVLTGQVPGALDAELTARKA---LPVLPPAVSVGVPSELAR 315 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKL 330 RPD+R E L + A IG++ + L+PSLSL+G + + ++ +++H +SFGP + Sbjct: 316 RRPDVRAAEASLHAATASIGVSVAQLFPSLSLSGQFGMRNSDASYLDNWSSHFYSFGPSV 375 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF G++ SN++ A + + +++TVL A+++VENAL S D++ VT L +V Sbjct: 376 TLPIFQGGRLVSNVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDRQQVTGLDESV 435 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + +L+ YRQG S ++ LD +R A+V+ A+ Q V LY A+G G+ Sbjct: 436 QALQNAFNLASDGYRQGLSSFIEPLDAQRQLAQVQQQAEQARVQSRLDLVALYKALGGGW 495 >gi|224368667|ref|YP_002602829.1| multidrug efflux system, outer membrane subunit [Desulfobacterium autotrophicum HRM2] gi|223691383|gb|ACN14666.1| multidrug efflux system, outer membrane subunit [Desulfobacterium autotrophicum HRM2] Length = 546 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/465 (27%), Positives = 241/465 (51%), Gaps = 34/465 (7%) Query: 14 LLAGCTV-GPEY-----TKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVK 66 + GC+V GP+Y TK H Q G + ++ +WWE F+D L +LV Sbjct: 71 FVGGCSVVGPDYQTPDLTKAHGAGWLGQPGAGERTSFSMDAPVARWWEQFDDPELTRLVG 130 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP--------NLKTNSTG 118 ++ NL + +A ERI A AD P Y ++ + + N + S G Sbjct: 131 EVVEANLDLSKARERIVEAGLRRRLTGADRMP--YVNLDGKIVQAGTGEKAVNREGPSPG 188 Query: 119 QLD--------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + S W++DL+G+ R +E++ + ++ +++ ++L+ +YID R Sbjct: 189 EEATLFSAGGFSGWELDLWGRVARLVEAANRSYEAELETYRYVSVSLTAELVLAYIDVRT 248 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +ER+ + ++L K++EL L++ G +++L + ++ ++ + P L ++ + Sbjct: 249 LEERLGALEKNIELLTKSLELVELRYRTGTSTELEVKQIRRQLNQTRALGPELRRARSVA 308 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I+ L G E +++ + ++ P + + IG+P DL+ R D+R E++ A +V Sbjct: 309 ANTIAILRGQVPAE--NHLAEGTHMHVPEM---MGIGLPVDLLTRRADVRRLERQYAAAV 363 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG AK+D YP LS+ GSI D+ F + +S GP+L P+FD GK+++ + Sbjct: 364 AMIGSAKADKYPRLSITGSIYFQTDDLGILFQPESIVYSLGPRLSFPLFDAGKLQTKVEI 423 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 S A++ + ++T+L A+ EVEN++ I +++ V L A+E +S+ L+ YR Sbjct: 424 RGSQAEQARLELEKTLLTAVGEVENSVVGIVHNQERVGFLGAALENAIRSVRLADQLYRI 483 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G SL +++D +R KV+ +L +AK+ V LY A+G G++ Sbjct: 484 GLGSLFELIDAQREQIKVQDELILAKQFELGEIVRLYRALGGGWD 528 >gi|54296688|ref|YP_123057.1| hypothetical protein lpp0719 [Legionella pneumophila str. Paris] gi|53750473|emb|CAH11867.1| hypothetical protein lpp0719 [Legionella pneumophila str. Paris] Length = 479 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 131/478 (27%), Positives = 240/478 (50%), Gaps = 38/478 (7%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHM------PLLPTQFSIGNSKNLINIDTLKWWESFN 57 R + LF I L GCTVGP+Y +P + P + I +S + L WW++F+ Sbjct: 3 RKLALLFSISCLFGCTVGPDYQRPDIKIQEKWPTSKVEKKISSSAPV----HLTWWKAFH 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIP 110 D L++ + A NL I A RI A+ A+ +P S IS + Sbjct: 59 DPLLDRYINEAATNNLDIKAAEARIRQARAMKQISLANFYPQINGSASANSLQISKGTLE 118 Query: 111 NLKTNSTG-------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + NS D+ W++DLFG+ RR +E+S A+L+ AY L+ Sbjct: 119 GIFANSPTYTLIDRNQWIYNLGFDAQWELDLFGKTRRKVEASKASLEEAYESRRTILLST 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SYI+ R ++ IA + ++L +K + L ++ G +S++ + E ++K+ E Sbjct: 179 IAEIARSYIELRGAQQLYGIAQKNVELQRKTLALVRQRYKAGVSSEVDVSLAEGQLKNTE 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P ++N + I+ +LG L + K + +P +P+ G+ +D++R RP Sbjct: 239 SVLPNYITQIQVNAYQIAVMLGKDPQTILKDIAKIQSLPKPPQKVPM--GLRSDILRQRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHWSFGPKLYL 332 DIR E++LA +VA+IG+A +D +P +L+ S + + D F + W GP++ L Sbjct: 297 DIRATERQLASAVAEIGVAVADFFPQFNLSVSNLAFQSTSVDTLFQSSSGFWLMGPQVSL 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+I++N+ ++ AQ+ I +++ +L A++E ++AL ++ L+ A+ Sbjct: 357 PIFHGGQIRANVESKKAVAQQAAIQYKKIILQALQEAQSALVRYSQSLDTNHSLRAAIIA 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+++ + ++ G L +L E A E ++ + + LY A+G G+ Sbjct: 417 NKRAVQFAKKRFQYGEDDYLSLLQSEAALLNAETQEVNSEVSSLTALISLYKALGGGW 474 >gi|320353350|ref|YP_004194689.1| NodT family RND efflux system, outer membrane lipoprotein [Desulfobulbus propionicus DSM 2032] gi|320121852|gb|ADW17398.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobulbus propionicus DSM 2032] Length = 474 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 228/462 (49%), Gaps = 31/462 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVKI 67 L I+L+ GCTVGP+Y +P + P+ + + +S K+L N WW+ FND L L++ Sbjct: 9 LLILLVGGCTVGPDYNRPPIDA-PSDWRLIDSEAKDLANT---PWWQQFNDPVLTTLIET 64 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-----------RFIPNLKTNS 116 AL++N + A RI RADLFP S + R+ KT + Sbjct: 65 ALRENKELQIAAARIEEYAGRYGMARADLFPQVSGSAEYNRQRVTELGDNRYASGYKTTT 124 Query: 117 ---TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + W+ID++G+ RR E++ A L ++ L+++S + YI+ R Sbjct: 125 DTFAATLGASWEIDIWGRIRRGTEAARAELLASEEGRRAVVLSLVSSVASGYINLRDLDR 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ I+ ++ L +F G S L L + ++ + + IP+LEK+ + Sbjct: 185 QLEISRNTATSRGQSYALFKERFAGGIISDLELSQNRSQYEEALASIPSLEKAIAQQENG 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAK 291 +S LLG + N L +P + G+P+DL+ RPDIR E+ L + A+ Sbjct: 245 LSVLLGRNPGPI-----PRGRNID-QLTLPAVVAGLPSDLLERRPDIRQAEQTLIAANAR 298 Query: 292 IGIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+ +PS+SL G+ + D S F G + W++ + +P+F GKI +++ AE Sbjct: 299 IGVAKAAYFPSISLTGAFGSASGDLSDLFKGPSKVWNYSAPVTMPLFTAGKIAGSVKEAE 358 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + Q+ + +Q+ + N +EV +AL + + ++ V+ ++ ++ + Y G Sbjct: 359 AIQQQALLGYQQAIQNGFREVNDALADQQHTTRQLAAQKNQVDSLRQYADIARLRYDNGY 418 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +LD ER+ E+ + + L + ++LY A+G G+ Sbjct: 419 TDYLAVLDAERSLFNAELAYTQTQGALHLALINLYKAMGGGW 460 >gi|21242237|ref|NP_641819.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107660|gb|AAM36355.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 474 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 127/457 (27%), Positives = 225/457 (49%), Gaps = 24/457 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VG +Y +P P T + WW F+D L +LV+ A Sbjct: 9 ALAALVLSGCAVGLDY-RPDPPAAVTLQGAQDPAYSAQSPVGNWWSQFDDPVLEQLVRDA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVARVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++R+ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKRL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L + +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 DVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + P P+ +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQQPDALDATLAARE---MPAFARPLPLGDTAGLLRQRPDVRGAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + LT D + G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLTGDAARLTEGNAKAWSVTPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+TVL A+++ ENAL + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQTVLLALEDTENALIGYGRQQARLAIVVEQANAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L +LD +R + L+ A+ + V +Y A+G Sbjct: 422 LTLLDAQRTQLAADDALAQAETAVNVGVVGVYKALGG 458 >gi|283478983|emb|CAY74899.1| Outer membrane efflux protein precursor [Erwinia pyrifoliae DSM 12163] Length = 521 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 240/480 (50%), Gaps = 50/480 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC +GP+Y P P +P F + +K L + WW++FND L+ L++ A+Q Sbjct: 28 LSGCVLGPDYQPPR-PAMPEVFNSMQAQQGAKPLASATRADWWKAFNDPQLDSLIERAVQ 86 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--------------------- 109 NL++ QA RI A++ + R PS S + RF Sbjct: 87 GNLSLQQAVLRIAGARQQLNQARGAWAPS--VSSNARFTRQQLGVKGELESQGIDDRLNG 144 Query: 110 --------PNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 P L + G D+ W++DL+G+ RR +E + A + + + A + Sbjct: 145 VDNADSVRPALDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSAEERNDALV 204 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ +Y+ R + +D+ ++ ++L+ + G + ++ A++ S Sbjct: 205 SLEAEVARAYLQLRGAQAITQTIETQIDVAQQTLDLTQSQQRNGLAPQTNVENARAQLSS 264 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P + ++ ++ L G P +++ P L +++G+P++L R Sbjct: 265 LRAQLPQYQAQIHQAMNGLAVLTGQVPGALDAELTARKA---LPVLPPAVSVGVPSELAR 321 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKL 330 RPD+R E L + A IG++ + L+PSLSL+G + + ++ +++H +SFGP + Sbjct: 322 RRPDVRAAEASLHAATASIGVSVAQLFPSLSLSGQFGMRNSDASYLDNWSSHFYSFGPSV 381 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF G++ SN++ A + + +++TVL A+++VENAL S D++ VT L +V Sbjct: 382 TLPIFQGGRLVSNVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDRQQVTGLDESV 441 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + +L+ YRQG S ++ LD +R A+V+ A+ Q V LY A+G G+ Sbjct: 442 QALQNAFNLASDGYRQGLSSFIEPLDAQRQLAQVQQQAEQARVQSRLDLVALYKALGGGW 501 >gi|261855396|ref|YP_003262679.1| RND efflux system, outer membrane lipoprotein, NodT family [Halothiobacillus neapolitanus c2] gi|261835865|gb|ACX95632.1| RND efflux system, outer membrane lipoprotein, NodT family [Halothiobacillus neapolitanus c2] Length = 493 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 131/458 (28%), Positives = 231/458 (50%), Gaps = 22/458 (4%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPT-QFSIGNSK--NLINIDTLKWWESFNDTSLNKLVKIA 68 ++L+GC VGP+Y KP +P+ Q I N+ ++ + +WW F+D L++L++ A Sbjct: 27 LILSGCAAVGPDYQKPTVPVPKNWQSPIVNASPPSVDDAGLARWWREFHDPVLDRLIERA 86 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN--------LKTNSTGQL 120 L N + QA R+ A+ AD FP+ + S I + + T Sbjct: 87 LANNKNLKQAEARLLEARARRGFAEADRFPTLGTNASANRIGSSQELGSGLINNQYTAGF 146 Query: 121 DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++D+FG +RR +E++ A ++++ A + + ++ +++ +Y++ R F R+++A Sbjct: 147 DARWEMDIFGGKRRALEAASAQVEASEADLSAVQTSLTAEVGVNYLNLRAFAARLAVAEA 206 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L + + +L+ ++ G TS+L L + + ++ + IP LE + + I+ LLG Sbjct: 207 NLAIQTQTRDLAQWRYQAGLTSRLDLEQATSALEQTRAQIPVLETNLAQTKNQIAILLGI 266 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + + P +N GIPADL+R RPDIR E++LA A+IG+A + Sbjct: 267 NPEDLPPFATAPI----PQADAMMNTGIPADLLRRRPDIRRAERQLAAQTAQIGVATAAQ 322 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP SL GSI L N F +S G +FD G+I NI+ + + Sbjct: 323 YPDFSLAGSIGLASLASGNLFTAGAKTFSIGSNAAWTLFDAGRIHQNIQIQNALQAQALA 382 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ TVL A EVENAL S +++ L AV + + +L+ Y G +LD Sbjct: 383 QYESTVLTAFAEVENALISYAREQERRAALTRAVAAAQSAQALAQSQYAAGLIDFQSVLD 442 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 +R+ ++ L+ ++ ++ S + LY A+G G+ NP Sbjct: 443 TQRSLLTLQDLLTTSEAAVSTSLIQLYKALGGGWVANP 480 >gi|46581648|ref|YP_012456.1| RND efflux system outer membrane lipoprotein [Desulfovibrio vulgaris str. Hildenborough] gi|46451071|gb|AAS97716.1| RND efflux system, outer membrane protein, NodT family [Desulfovibrio vulgaris str. Hildenborough] gi|311235289|gb|ADP88143.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris RCH1] Length = 541 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 127/470 (27%), Positives = 233/470 (49%), Gaps = 44/470 (9%) Query: 16 AGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 A VGP+++ P +P + S + + ++D WW +FND L+ LV A NL Sbjct: 40 ACAKVGPDFSAPGGDVPDVWQDASHPVASSDADVDG-TWWNTFNDPVLDSLVTEARSANL 98 Query: 74 TILQATERINAAKENILSVRADLFPSS--------YASISHRFIPNLKTNSTGQ------ 119 ++ A R+ A+ + + +L+P + + S R P +TG+ Sbjct: 99 SLHLAALRVFEARARLGAAVGNLYPQTQQGTGGLTWTHPSDR-APTAPQPTTGRDNPDYV 157 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 LD W++D +G+ RR IE++ A+L ++ A A ++V +++ SYI R +++ Sbjct: 158 QTSAGLDVAWELDFWGKFRRGIEAADADLRASMADHQTALVSVSAEVARSYILYRTVQKQ 217 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++IA + + ++++ ++ +F GATS+ + + + ++ E+ IP L S R + + Sbjct: 218 LAIAETNVAIQRESLRIATARFNYGATSERDMRQALSLLRDTEARIPNLAHSLRETRNAL 277 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG + + + P + +GIPADL+R RPD+ A A++G Sbjct: 278 CVLLGKAPQDI---SARLGDAPIPTAPTHVAVGIPADLLRRRPDVHKALATAAGQCARLG 334 Query: 294 IAKSDLYPSLSLNGSIALT------------HDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 +AK+D YP+ +L G + T N F Y GP L LP+F+ G+I Sbjct: 335 VAKADFYPAFTLGGFVGFTASNVGAFGLGDTFSNGFTAYG-----GPGLSLPLFNYGRIV 389 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 SN+R ++ Q+ +++ETVL A++E E+A+ + + L + +SM L++ Sbjct: 390 SNVRAQDARFQQSLTSYRETVLVALRETEDAIDRFIQAQGRTALLTESASDAARSMQLAL 449 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 I Y++G +L R A E L+ AK ++ +S V ++ A+G G++ Sbjct: 450 IQYQEGSTDFTTVLTAARDLATREDALAAAKGEICQSLVAMFKALGGGWH 499 >gi|70730606|ref|YP_260347.1| multidrug efflux RND outer membrane protein OprN [Pseudomonas fluorescens Pf-5] gi|68344905|gb|AAY92511.1| multidrug efflux RND outer membrane protein OprN [Pseudomonas fluorescens Pf-5] Length = 473 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 130/462 (28%), Positives = 232/462 (50%), Gaps = 21/462 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKL 64 SL ++ L+ C VGP+Y P + + N D + WW+ F+D +LN+L Sbjct: 9 SLLVLALSACAVGPDYQTPTTEAAHISAATDGAAGQKNFDRARFEGIWWQQFDDPTLNQL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS--SYAS--ISHRFIPNLKTNSTGQ- 119 V +LQ N + A R+ AA+ D P+ S AS ++ IP T Sbjct: 69 VSKSLQGNRELRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQTTKRVNSE 128 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 LD W++DLFG+ +R++E++ A+ +A A + ++ +I++L+ +Y R + R Sbjct: 129 RYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQLRGAQLR 188 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA LD +++ +++ G +L +V+ +A + S+E+ +P L+ + I Sbjct: 189 EKIALANLDNQQESRKITESLRDAGVGDQLDVVRADARLASVEASVPQLQAEQTRQRNRI 248 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + + S P + + IG P +L++ RPDI E+KLA + A+IG Sbjct: 249 ATLLGERPDKLSVDL---SPAQLPAIAKALPIGDPGELLQRRPDILSAERKLAAATARIG 305 Query: 294 IAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+DL+P +SL+G + T W+ GP + FD G +++ +R A+++ Sbjct: 306 VAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGADAN 365 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A ++++ VL A++E ENA + + ++ + L E + + L+ I YR+G Sbjct: 366 ADGALASYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAEIRYREGTVD 425 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD +R E + A+ L + V +Y A+G G+ P Sbjct: 426 FLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWQP 467 >gi|295096495|emb|CBK85585.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 496 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 130/482 (26%), Positives = 242/482 (50%), Gaps = 45/482 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLVKI 67 ++LL GC VGP Y +P P G+S + +WW++F L+ L++ Sbjct: 1 MMLLVGCAVGPNYQQPAPPATTHWNDKGDSAVKSQTSSAATNPRWWKTFGSPQLDSLIER 60 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFI---- 109 A+ NLT+ Q RI A+E I FPS ++ SH Sbjct: 61 AIAGNLTLQQTVLRIAGAREQINQAGGAFFPSVNGNVQATRQQLGLEGELKSHGVYDQLN 120 Query: 110 ---PNLKTN----------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 P L+ G D+ W+IDL+G+ RR +E++ A +A Q + A ++ Sbjct: 121 NVDPELRGALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAAEAQQRAAIEQRNDALVS 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ +++ R + I+ + ++ ++ ++L+ + G + ++ + A++ ++ Sbjct: 181 LEAEVARAWLQLRGAQSIIATLNTQIESAQQTLDLTESRQRGGLSPQMDVENARAQLGNL 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 E+ +P + R ++ ++ LLG P +Q + QP +P + GIP+ L R Sbjct: 241 EAQLPQYQAQERQAMNGLAILLGKPPGALDAELQ----SVQPIPALPDIVQTGIPSTLAR 296 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKL 330 RPD+R E L + A+IG++ ++L+PS +L+G L + N +++H +SFGP++ Sbjct: 297 RRPDVREAEANLHAATAQIGVSVAELFPSFTLSGQFGLRNSESNWLTDWSSHFYSFGPQV 356 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIF G++ S+++ A + + +++TVL A+ +VENAL S D++ L + Sbjct: 357 SIPIFQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVSYRTDQQREAGLAKTI 416 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ +YRQG S +D+LD +R A+ E + A+ Q A V LY A+G G+ Sbjct: 417 DALQNAFDLASDSYRQGIASFIDVLDAQRQLAQAEQQRAQAQVQSALDLVALYKALGGGW 476 Query: 451 NP 452 P Sbjct: 477 EP 478 >gi|77456372|ref|YP_345877.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77380375|gb|ABA71888.1| putative ABC transport system, lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 483 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 128/470 (27%), Positives = 238/470 (50%), Gaps = 32/470 (6%) Query: 9 SLFIVL----LAGCTVGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTLKWWESFNDT 59 SL +VL LA CTVGP++ KP + P++ ++ S+ + +WWE F+D Sbjct: 6 SLTVVLSLSALAACTVGPDFQKPQATQIAEWAKPSKTAV--SQAVSEPLNERWWEVFHDA 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN----LKTN 115 L+ L + AL+ NL + A+ R+ ++ + AD +P++ A+ S+ N L Sbjct: 64 QLSALTQRALRSNLDLQLASSRLQQSRAARQVITADRYPTTAATGSYARKRNSGEGLNDP 123 Query: 116 STGQLDS-----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 S DS W++D +G+ RR E++ ANL+ A L V++ + Sbjct: 124 SGHNGDSAFNLWDAGFSASWELDFWGRVRRETEAADANLEVAENDRRGVLLAVLADTAQN 183 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + ++ Q LD+ + +++LS L+ G + L + + A++ +IES +P LE Sbjct: 184 YIQLRGVQNTRAVTEQNLDVARHSLKLSQLRLNDGVATDLDVAEAAAQVAAIESRLPALE 243 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++ IS L+G P + ++ P + + IG+P+ L RPDIR E Sbjct: 244 QRQAQLINAISLLMGEPPQTLAKELS--TDAPVPQSPLTVAIGLPSQLAERRPDIRQAEA 301 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 +L + A IG+AK D YP ++L+G++ + F + + + GP+ LP+FD G++ Sbjct: 302 RLHAATANIGVAKGDFYPRITLSGNLGSQAMQLSDFGSWGSRAFGIGPQFSLPLFDGGRL 361 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + ++ E+ QE I +Q+TVL A E+++ LT+ N ++ L AV ++ ++ + Sbjct: 362 RGVLQLREAQQQEAAIGYQQTVLRAWHEIDDQLTAYNASQRRRDSLAEAVRQNQIALRTA 421 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y +G +++L ++ A + + ++ + + LY A+G G+ Sbjct: 422 QQQYVEGVVDFVNVLTVQGALLATQEQWVESSTGVSLAMIGLYRALGGGW 471 >gi|186473792|ref|YP_001861134.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184196124|gb|ACC74088.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 515 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 130/481 (27%), Positives = 227/481 (47%), Gaps = 49/481 (10%) Query: 17 GCTVGPEYTKP--HMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP++ +P P + TQ + SK + WWE FND +LN L K N Sbjct: 23 GCLVGPDFERPASSTPDVFNRTQSAQAPSKAVEAGFNPDWWELFNDPTLNALEKQLADAN 82 Query: 73 LTILQATERINAAKENILSVRADLFP---------------------------------- 98 L + A+ R+ ++ A +P Sbjct: 83 LDVAAASARLRQSRAEQRVAGAAEYPTLTGAASYNRERGSENGILSLLGVTPTSTQPQSA 142 Query: 99 SSYASISHRFIPNLKTNSTGQL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 S A + +P K + L D+ W+ID++G+ RR +E++ A D+++ + + Sbjct: 143 SGSAPLGVSAMPGSKGSPAYDLYQFGFDASWEIDIWGRVRRSVEAASALTDASFEERNAV 202 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L+ ++L YI R + + IA Q LD+ + L+ + +G T+ L + A+ Sbjct: 203 LLSARAELARDYIQLRDTQALLQIARQNLDIARDATRLTQTRAHEGVTTDLDVANASAQA 262 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 +IES IPTLE ++ I LL + + P L + IG P++L+ Sbjct: 263 ANIESLIPTLESRRATTINAIGVLLAKEPGALGDMLADPGD--VPALPAQVPIGFPSELV 320 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPK 329 + RPDIR E +L + A IG+AK+D YP +SLNGS L N + + GP Sbjct: 321 QRRPDIRKAEAQLHAATAAIGMAKADFYPRISLNGSAGFQSLQLSNLADWASGQFVVGPS 380 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIF+ G++K ++ E+ QE I ++ TVL A +EV++AL + +++ +L+ Sbjct: 381 ITLPIFEGGRLKGTLQLREAQQQEAAIVYKRTVLQAWREVDDALIVYDAEQRRHERLEEV 440 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+L+ +++S++ Y+ G LD+L++++ + +L +K + + L +G G Sbjct: 441 VKLNLRALSIARQRYKAGAVDFLDVLNVQKQLLDAQSNLEQSKADADANLITLCKVLGGG 500 Query: 450 Y 450 + Sbjct: 501 W 501 >gi|224826361|ref|ZP_03699463.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224601462|gb|EEG07643.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 496 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 117/465 (25%), Positives = 233/465 (50%), Gaps = 22/465 (4%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI--GNSKNLI--NIDTLKWWESFNDTS 60 RA+F + +L C VGP+Y P + + P G + + +WWE +D Sbjct: 29 RAVF-VMPLLATACAVGPDYRAPALAVPPAWHGPLQGGLHTTVPPAAELARWWERLDDPL 87 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTG 118 L++L+ A+ NL + A R+ A+ A+ +P+ + A+++ + + G Sbjct: 88 LSRLIDEAVANNLDVKLAQARLREARARYGLAVAERYPALNARAAVNRNRSSDEMSQGNG 147 Query: 119 --------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QLD++W++DLFG RR E++ A LD+ + ++++++++ Y++AR Sbjct: 148 RAVETWSAQLDANWELDLFGGLRRAQEAAAATLDAEQEALRDTRVSLLAEVALGYVEARG 207 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 F+ R+++A L + +++ + G T++L + ++ + +P L++ + Sbjct: 208 FQARLALARGSLATQDETWQITRWRHQAGLTTQLDEDQARFNLEQTRAQLPALQQGLAQS 267 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ LLG E Q + P+L + +GIPAD +R RPD+R E++LA + Sbjct: 268 KQRLAVLLGRAPGELSELDQPAAI---PHLPATVAVGIPADTLRQRPDLRRAERQLAAAT 324 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A++G+A + YP +SL+G++ AL+ ++ G + +FD G+++ NI Sbjct: 325 AQVGVASAAAYPDVSLSGTLGLQALSGGRLLRSSAGLYALGASVGQVVFDAGRVRHNIEV 384 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + Q+ + +Q VL A+++VE AL + E++ L+ AV + + L+ Y+ Sbjct: 385 QNALQQQAQLNYQSAVLTALRDVEGALVAYAEEQNRGVALREAVTAAQGAADLASSQYQA 444 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LD +R+ ++ LS ++ + V LY A+G G++ Sbjct: 445 GLVDFQAVLDTQRSLLSLQDQLSQSEAAAVSNLVRLYKALGGGWD 489 >gi|54293646|ref|YP_126061.1| hypothetical protein lpl0699 [Legionella pneumophila str. Lens] gi|53753478|emb|CAH14933.1| hypothetical protein lpl0699 [Legionella pneumophila str. Lens] Length = 489 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 130/478 (27%), Positives = 239/478 (50%), Gaps = 38/478 (7%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHM------PLLPTQFSIGNSKNLINIDTLKWWESFN 57 R + LF I L GCTVGP+Y +P + P + I +S + L WW++F+ Sbjct: 3 RKLALLFSISCLFGCTVGPDYQRPDIKIQEKWPTSKVEKKISSSAPV----HLTWWKAFH 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIP 110 D L++ + A NL I A RI A+ A+ +P S IS + Sbjct: 59 DPLLDRYISEAATNNLDIKAAEARIRQARAMKQISLANFYPQINGSASANSLQISKGTLE 118 Query: 111 NLKTNSTG-------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + NS D+ W++DLFG+ RR +E+S A+L+ AY L+ Sbjct: 119 GIFANSPTYTLIDRNQWIYNLGFDAQWELDLFGKTRRKVEASKASLEEAYESRRTILLST 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SYI+ R ++ IA + ++L +K + L ++ G +S++ + E ++K+ E Sbjct: 179 IAEIARSYIELRGAQQLYGIAQKNVELQRKTLALVRQRYKAGVSSEVDVSLAEGQLKNTE 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P ++N + I+ +LG L + K + +P +P+ G+ +D++R RP Sbjct: 239 SVLPNYIAQIQVNAYQIAVMLGKDPQTILKDIAKIQSLPKPPQKVPM--GLRSDILRQRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHWSFGPKLYL 332 DIR E++LA +VA+IG+A +D +P +L+ S + + D F + W GP++ L Sbjct: 297 DIRATERQLASAVAEIGVAVADFFPQFNLSVSNLAFQSTSVDTLFQSSSGFWLMGPQVSL 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+I++N+ ++ Q+ I +++ +L A++E ++AL ++ L+ A+ Sbjct: 357 PIFHGGQIRANVESKKAVVQQAAIQYKKIILQALQEAQSALVRYSQSLDTNHSLRAAIIA 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+++ + ++ G L +L E A E ++ + + LY A+G G+ Sbjct: 417 NKRAVQFAKKRFQYGEDDYLSLLQSEAALLNAETQEVNSEVSSLTALISLYKALGGGW 474 >gi|120601194|ref|YP_965594.1| RND efflux system outer membrane lipoprotein [Desulfovibrio vulgaris DP4] gi|120561423|gb|ABM27167.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris DP4] Length = 541 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 129/466 (27%), Positives = 236/466 (50%), Gaps = 36/466 (7%) Query: 16 AGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 A VGP+++ P +P + S + + ++D WW +FND L+ LV A NL Sbjct: 40 ACAKVGPDFSAPGGDVPDVWQDASHPVASSDADVDG-TWWNTFNDPVLDSLVTEARSANL 98 Query: 74 TILQATERINAAKENILSVRADLFPSS--------YASISHRFIPNLKTNSTGQ------ 119 ++ A R+ A+ + + +L+P + + S R P +TG+ Sbjct: 99 SLHLAALRVFEARARLGAAVGNLYPQTQQGTGGLTWTHPSDR-APTAPQPTTGRDNPDYV 157 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 LD W++D +G+ RR IE++ A+L ++ A A ++V +++ SYI R +++ Sbjct: 158 QTSAGLDVVWELDFWGKFRRGIEAADADLRASMADHQTALVSVSAEVARSYILYRTVQKQ 217 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++IA + + ++++ ++ +F GATS+ + + + ++ E+ IP L S R + + Sbjct: 218 LAIAETNVAIQRESLRIATARFNYGATSERDMRQALSLLRDTEARIPNLAHSLRETRNAL 277 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG + + + P + +GIPADL+R RPD+ A A++G Sbjct: 278 CVLLGKAPQDI---SARLGDAPIPTAPTHVAVGIPADLLRRRPDVHKALATAAGQCARLG 334 Query: 294 IAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWS------FGPKLYLPIFDKGKIKSNIR 345 +AK+D YP+ +L G + T N SF G +S GP L LP+F+ G+I SN+R Sbjct: 335 VAKADFYPAFTLGGFVGFTASNVGSF-GLGDTFSNGFTAYGGPGLSLPLFNYGRIVSNVR 393 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ Q+ +++ETVL A++E E+A+ + + L + +SM L++I Y+ Sbjct: 394 AQDARFQQSLTSYRETVLVALRETEDAIDRFIQAQGRTALLTESASDAARSMQLALIQYQ 453 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G +L R A E L+ AK ++ +S V ++ A+G G++ Sbjct: 454 EGSTDFTTVLTAARDLATREDALAAAKGEICQSLVAMFKALGGGWH 499 >gi|94971098|ref|YP_593146.1| RND efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] gi|94553148|gb|ABF43072.1| RND efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] Length = 464 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 142/473 (30%), Positives = 239/473 (50%), Gaps = 32/473 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWESF 56 MN R + +L ++L+AGC VGP Y +P + +P + G N I++ KWW+ F Sbjct: 1 MNCKRILLALLLLLMAGCKVGPNYKRPAV-TVPDAYRGPTLDGGQANGISLGEQKWWDVF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKT 114 ND L KL++ AL N + A R+ A+ + RAD FP+ AS + IP +K Sbjct: 60 NDEQLQKLIRQALDANYDVKIAATRVLQAQAALGITRADQFPTIAGGASALNERIPRVKG 119 Query: 115 -----NSTGQLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 NS Q++ W++D +G+ RR E++ A+L S +VIS + Y Sbjct: 120 LPAYENSALQVNLSLVWQLDFWGKYRRATEAARADLLSTEWGKRAVINSVISNVANGYFQ 179 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + IA L ++++ L +++ G TS L + + E + + + IP LE+ Sbjct: 180 LLELDREMEIAKGTLASRQESLRLVNIRQKGGTTSLLDVRQSEQLLYTAAAAIPDLERRI 239 Query: 227 RMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + IS LLG P +Q+ + + + G+P+ L+ RPD++ E++L Sbjct: 240 EQEENFISILLGQNPGP-----IQRGKPLVEFAILPSVPPGLPSTLLERRPDLQSAEQQL 294 Query: 286 ADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + A+IG+AK+D +P +SL S ALT F G WSFG +L PIF GKI Sbjct: 295 VAANARIGVAKADYFPQISLTALGGYQSSALT--GLFSGPAGLWSFGGQLAQPIFTGGKI 352 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +SN+R E+ QE +Q+++ A +EV ++L + ++++ + + + L+ Sbjct: 353 RSNVRLTEAQQQEAVFRYQQSIQQAFREVSDSLVAYRKNQEFREQEANLAASAVDATRLA 412 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 I Y G S L++LD + T + ++S+A+ QL + + V LY A+G G+ Sbjct: 413 RIRYEGGVSSYLEVLDND--TRSFDAEISLAQAQLGERVALVQLYNALGGGWQ 463 >gi|188534326|ref|YP_001908123.1| RND efflux system, outer membrane lipoprotein, NodT precursor [Erwinia tasmaniensis Et1/99] gi|188029368|emb|CAO97245.1| RND efflux system, outer membrane lipoprotein, NodT precursor [Erwinia tasmaniensis Et1/99] Length = 515 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 128/480 (26%), Positives = 237/480 (49%), Gaps = 50/480 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L GC +GP+Y +PH P F G K L + WW++FND L+ L++ A++ Sbjct: 22 LGGCALGPDY-QPHAANTPAAFHGEQMPGGGKTLASAPRADWWKAFNDPQLDSLIERAVR 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--------------------- 109 NL++ QA RI A++ + VR PS S + RF Sbjct: 81 GNLSLQQAVLRIAGARQQLNQVRGGWAPS--VSGNARFTRQQLGVKGELESQGIDQRLNG 138 Query: 110 --------PNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 P L + G D+ W++DL+G+ RR +E + A + + + A + Sbjct: 139 IDNADGVRPALDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSVEERNDALV 198 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ Y+ R + +D+ ++ ++L+ + G + ++ A++ S Sbjct: 199 SLEAEVARVYLQLRGAQAITRTVETQIDVAQQTLDLTQSQQRNGLAPQTNVENARAQLNS 258 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P + + ++ ++ L G P +++ P L + +G+P++L R Sbjct: 259 LRAQLPQYQAQIHLAMNGLAVLTGRVPGALDAELTPRKA---LPLLPPTLRVGVPSELAR 315 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKL 330 RPD+R E L + A IG++ + L+PSLSL+G + + ++ +++H +SFGP + Sbjct: 316 RRPDVRAAEASLHAATANIGVSVAQLFPSLSLSGQFGMRNSDASYLDNWSSHFYSFGPSV 375 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF G++ S+++ A + + +++TVL A+++VENAL S D + VT L +V Sbjct: 376 TLPIFQGGRLVSSVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDLQQVTGLDESV 435 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ +YRQG S +D LD +R A+V+ A+ Q V LY A+G G+ Sbjct: 436 QALQNAFHLASDSYRQGLSSFIDALDAQRQLAQVQQQAEQARLQSRLDLVALYKALGGGW 495 >gi|307292939|ref|ZP_07572785.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306881005|gb|EFN12221.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 509 Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 132/482 (27%), Positives = 232/482 (48%), Gaps = 45/482 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-----INIDTL---KWWESFNDTS 60 SL + LAGCT+GP +TKP P P ++ S + I D WW +FND Sbjct: 19 SLMALALAGCTMGPNFTKP-APSAPADWTSWRSGDASLHGAIGTDATLPADWWRAFNDPV 77 Query: 61 LNKLVKIALQQN-------LTILQA-TERINAAKENILSVRADLFPSSYASISH------ 106 L++LV+ + L + QA +R +AA + + + A S H Sbjct: 78 LDELVRRGFAASPDLQTAALHVAQARVQRGSAAVQGLPQINASGQVSRQRQSEHGASTRL 137 Query: 107 -----------------RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQ 148 + + T LD+ W++DL+G+ RR +E++ A + A Sbjct: 138 LNVVSSSSSGSDRDALVKLLSEPFTLYQTGLDASWELDLWGKVRRSLEAADAGVAQQAAL 197 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 +D A+L++ S + +Y D R + +I++A + + K+ +L + T G + L + Sbjct: 198 LDHARLSLASDVARNYFDLRATQRKIALAREDITALKERTDLLSARTTGGINNHFDLERQ 257 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 +E++ IE+ +P L + I+ LLG ++ ++ +P L + +G+P Sbjct: 258 RSELQGIEAQLPALLAQEAAQANQIALLLGERPGALGDLLKPVADAGKPALP-DLALGLP 316 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +++ RPDIR E +L A IG+AK+D+YPS+ L G L +N F + WS Sbjct: 317 SEIALCRPDIRAAEARLHSVTANIGVAKADMYPSIRLGGGFNLESYRAENLFDWASRAWS 376 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP + LP+FD G+ K ++ E +E +++Q+TVL A +E+++AL +++ Sbjct: 377 IGPSVSLPLFDGGRRKRVVQLRELEQKEAAVSYQQTVLQAWQEIDDALNGYTAEQQQNAM 436 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L ++ + + L+ YR G + LD++D +R + DL+ + +LA Y L A Sbjct: 437 LAARLDSARAAFDLASARYRGGVITWLDVIDSQRTMLQASRDLADSNGRLATRYAALNKA 496 Query: 446 IG 447 IG Sbjct: 497 IG 498 >gi|167033513|ref|YP_001668744.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166860001|gb|ABY98408.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 471 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 135/472 (28%), Positives = 239/472 (50%), Gaps = 28/472 (5%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESF 56 MN+L+ + SL + LA C VGP+Y P P Q + + + ++L WW+ F Sbjct: 1 MNLLKPLTPSLLALALAACAVGPDYQAPATE--PAQLASDVQAKAYDRSRFESL-WWKQF 57 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS--ISHRFIPNL 112 +D LN+LV+ +L N + A R+ +A+ D FP +S AS I IP Sbjct: 58 DDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDQFPVVTSRASSDIGKGQIPGQ 117 Query: 113 KTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T LD W++DLFG+ +R IE+S A A A + ++++I++L+ +Y Sbjct: 118 TTQRVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYG 177 Query: 166 DAR--HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 R +E+I++A+ L +++ ++ G + L +V+ +A + +E+ +P L+ Sbjct: 178 QLRGAQLREKIALAN--LKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQ 235 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H I+TLLG + S P + + +G P +L+R RPDIR E+ Sbjct: 236 AEQARARHRIATLLGQRPDALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAER 292 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKI 340 +LA + A +G+A +DL+P +SL+G + T S G + W+ GP + FD G + Sbjct: 293 QLAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSV 352 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R A++ A+ +++ VL A++E NA + ++ ++ + L + +K+ L+ Sbjct: 353 RARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELA 412 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YR+G L +LD ER E + + +L + V +Y A+G G+ P Sbjct: 413 SIRYREGTVDYLVLLDAERERLSAEDAQAQGEVELYRGIVSIYKALGGGWQP 464 >gi|218885142|ref|YP_002434463.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756096|gb|ACL06995.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 538 Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 124/461 (26%), Positives = 234/461 (50%), Gaps = 36/461 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNLT--- 74 VGP+++ P +PT + + +WW +F+D +LN L+ A NL+ Sbjct: 40 VGPDFSAPDT-AMPTGWQDAAVLGATATREVSEEWWRTFDDATLNGLLAEARGGNLSLQV 98 Query: 75 ----ILQATERINAAKENILSVR------------ADLFPSSYASISHRFIPNLKTNSTG 118 +L+A R+ A N+ R +D P++ + R P+ S G Sbjct: 99 TALRVLEARARLGVAVGNLYPQRQQATGGLTWTHPSDRTPTAPQPGTGRGNPDYVQTSVG 158 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 LD+ W++D +G+ RR +E++ A+L +A A + A + V + + SY+ R +++++IA Sbjct: 159 -LDAAWELDFWGKYRRGVEAADADLRAAAADYEAAMVAVTANVAQSYVLYRTLQQQLAIA 217 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + ++++ ++ +F GATS+ + + + ++ E+ IP+L S R + + LL Sbjct: 218 DNNVAIQRESLRIATARFNYGATSERDMRQALSLLRDTEASIPSLAHSLREARNALCVLL 277 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + + P + +GIPADL+R RPD+R E A A++G+AK+ Sbjct: 278 GKPPQDLAAMLGTAPI---PTAPAGLALGIPADLLRRRPDVRKAEYAAAGQCARLGVAKA 334 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSF--------GPKLYLPIFDKGKIKSNIRRAES 349 D YPS+SL G + T N ++T +F GP L LP+F+ G+I +N+R ++ Sbjct: 335 DFYPSISLGGFVGFTASN-VGAFSTGDTFSHGFTAYGGPGLTLPLFNYGRIANNVRAQDA 393 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 Q+ ++ETVL+A++E E+ + + L + +S+ L+M+ Y++G Sbjct: 394 RFQQALTAYRETVLSALRETEDGIDRYLNAQGRAALLTESAADAARSLELAMVQYQEGST 453 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L R + + L+ A ++++S V ++ A+G G+ Sbjct: 454 DFTTVLTAARDLSTRQDALAQASGEISQSLVAVFKALGGGW 494 >gi|296103248|ref|YP_003613394.1| RND efflux system, outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057707|gb|ADF62445.1| RND efflux system, outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 495 Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 129/481 (26%), Positives = 242/481 (50%), Gaps = 45/481 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNS----KNLINIDTLKWWESFNDTSLNKLVKIA 68 +LLAGC VGP+Y P P + G+S + +WW++F L+ L++ A Sbjct: 1 MLLAGCAVGPDYQPPAPPAVTHWNDKGDSTVKSQTTSAATNPRWWKTFGSPQLDSLIERA 60 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFI----- 109 + NL++ Q RI A+E I +PS ++ SH Sbjct: 61 IAGNLSLQQTVLRIAGAREQINQAGGAFYPSVNGNLQATRQQLGLEGELKSHGVYDQLDN 120 Query: 110 --PNLKTN----------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P L+ G D+ W+IDL+G+ RR +E++ A +A Q + A +++ Sbjct: 121 VDPELRGALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAAEAQQKAAIEQRNDALVSL 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +++ R + I+ + + ++ ++L+ + G + ++ + A++ ++E Sbjct: 181 EAEVARAWLQLRGAQSIIATLNTQIKSAQQTLDLTESRQRGGLSPQMDVENARAQLGNLE 240 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + +P + R ++ ++ LLG P +Q + QP +P + GIP+ L R Sbjct: 241 AQLPQYQAQERQAMNGLAILLGKPPGALDAELQ----SAQPMPALPDIVQTGIPSTLARR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKLY 331 RPD+R E L + A+IG++ ++L+PS +L+G L + N +++H +SFGP++ Sbjct: 297 RPDVREAEANLHAATAQIGVSVAELFPSFTLSGQFGLRNSESNWLTDWSSHFYSFGPQVS 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF G++ S+++ A + + +++TVL A+ +VENAL S D++ L ++ Sbjct: 357 IPIFQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVSYRTDQQREAGLAKTID 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + L+ +YRQG S +D+LD +R A+ E + A+ Q A V LY A+G G+ Sbjct: 417 ALQNAFDLASDSYRQGIASFIDVLDAQRQLAQAEQQRAQAQVQSALDLVALYKALGGGWE 476 Query: 452 P 452 P Sbjct: 477 P 477 >gi|291616843|ref|YP_003519585.1| NodT [Pantoea ananatis LMG 20103] gi|291151873|gb|ADD76457.1| NodT [Pantoea ananatis LMG 20103] Length = 514 Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 131/477 (27%), Positives = 241/477 (50%), Gaps = 40/477 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLV 65 + + L GC+VGP+Y P P LP + +S+ T +WW +F D L+ L+ Sbjct: 21 MLLFALTGCSVGPDYQAPK-PQLPGSYHALDSQETSRPQTSAVDSRWWRNFGDPQLDSLI 79 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---LKTNSTGQL 120 A++ NL++ QA RI A+E + + LFPS A ++ + + LK N QL Sbjct: 80 ARAIEGNLSLQQAVLRIAGAREQLSQAQGGLFPSLNGSAKVTRQQLGLEGLLKANGADQL 139 Query: 121 DSD----------------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 DS+ W++DL+G+ RR IES+ A +A Q + A +++ Sbjct: 140 DSNVASQLNGLTHPVTLYQGSFDASWELDLWGKVRRQIESANAQQQAAIEQRNDALVSLE 199 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++++ +++ R + + Q + + + +L+ + G ++ A++ S+++ Sbjct: 200 AEVVRAWLQLRGAQATVKTLQQQIAVADQTWQLTESQQRNGLAPVTNVENARAQLSSLQA 259 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P + R ++ ++ LLG + + P L +++GIP+ L R RPD Sbjct: 260 QLPQYQAQTRQAMNGLAVLLGKTPGALDAELSE--PKALPALPAFVSVGIPSTLARRRPD 317 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKLYLPI 334 IR E L A+IG++ + L+PSLSL G + + T + +++H +S GP L +PI Sbjct: 318 IRQAEATLHAQTAEIGVSVAQLFPSLSLTGQLGVRNTDVSYLDNWSSHFYSVGPSLSIPI 377 Query: 335 FD-KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 F +G ++ R + +++ +++TVL A+++VENAL S D++ VT L Sbjct: 378 FQGEGWFPASGWRGRNRP-ARHLNYRQTVLTALQDVENALVSYRADQQRVTALDETTGAL 436 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ L+ +YRQG + L++LD +R A+ + + A+ Q V LY A+G G+ Sbjct: 437 QRTFDLASDSYRQGLSTFLEVLDAQRQLAQAQEQATQARMQSGLDLVALYKALGGGW 493 >gi|171912833|ref|ZP_02928303.1| outer membrane protein [Verrucomicrobium spinosum DSM 4136] Length = 479 Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 128/456 (28%), Positives = 232/456 (50%), Gaps = 20/456 (4%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIA 68 L + LL+ C VGP P + QF N + T+ +WW +ND LN LV A Sbjct: 12 LSLCLLSACAVGPNPKTPETQV-GAQFDNKNQGGYVTAPTVAQWWRRYNDPKLNSLVDRA 70 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------FIPNLKTNST--- 117 + NL + A R+ A+ +VR D FP+ ++ S+ P L S Sbjct: 71 IASNLDLKIAAARVEEARALRAAVRYDYFPTVTSAASYTNQRQSKAASSPGLDRTSELYD 130 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 LD+ W++D +G+ RR ++ A++ +A A V+ + V +++ +Y++ R + ++++ Sbjct: 131 AGLDASWELDFWGRVRRSNWAARADVRAAEAAVEDGLVLVTAEVASTYLELRGLQHQLAV 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + D ++ ++L+ G ++L + A++ S + IP +E ++H +S L Sbjct: 191 RRRNADNQQQTLKLTESLLQGGRGTELDTSRARAQLNSTLAAIPLIEGLIAQDIHRLSVL 250 Query: 237 LGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G P+T ++ + P L + IG P++L+R RPDIR E L + ++G+A Sbjct: 251 IGTTPSTLKPELIKPRP---IPTLPSIVRIGNPSELLRRRPDIRAVEADLEAATHRVGVA 307 Query: 296 KSDLYPSLSLNGSIALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +DL+P ++ NG+ +L D SF G ++ SFGP++ FD G++K+ I A + Q Sbjct: 308 TADLFPRVTFNGTASLQAD-SFSGPWSGANSFGPRISWAAFDLGRVKAQINAANARVDAQ 366 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 T+ +TVL A++E ENAL + + L + +++ +L+ Y+ G L + Sbjct: 367 VSTYYKTVLGALEETENALVTFGRQRARRNYLSESATASEQAANLARERYQNGVADFLTV 426 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD ER + + L+ ++ A S V +Y A+G G+ Sbjct: 427 LDAERVLLEAQSLLAESQTATATSQVAIYKALGGGW 462 >gi|149376918|ref|ZP_01894673.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter algicola DG893] gi|149358810|gb|EDM47279.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter algicola DG893] Length = 464 Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 112/433 (25%), Positives = 211/433 (48%), Gaps = 36/433 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL GC VGP+Y P P P FS G + D ++W+ F+D L +L+ AL Sbjct: 11 LALLTGCAVGPDYQAPATPE-PNAFSEGRTMVAGGTDQQRFWQGFDDPLLARLIDDALAT 69 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQ---------- 119 NLT+ A R A + D +PS AS S +++ +++ + G Sbjct: 70 NLTLEGAVARYERAAALLYGAERDQWPSVTASASGAEQYLADIEQSPPGAGPERVQRYQA 129 Query: 120 -LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + + W++DLFG+ RR E+ A L++ A + ++ + +L SY + R +E+ +A Sbjct: 130 GVAASWELDLFGRLRRATEAQRAELEAVGADLGAVQVAIAGQLASSYFELRGLQEQYQVA 189 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + L ++++++ + G ++ V+ +++ +++PTL+ R +H IS L Sbjct: 190 LQSVALQQQSLDIVEARVEAGRGTEFDQVRARVQLERTRAELPTLQAGIRGAMHRISVLT 249 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + + + IP++ P +++R RPDI E++LA S A+IG+A + Sbjct: 250 GQPPMALVETLSPLGALPETLPTIPVD--SPGEVLRRRPDIAAAERRLAASTARIGVATA 307 Query: 298 DLYPSLSLN---GSIALTHDNSFPG--------YNTHWSFGPKLYLPIFDKGKIKSNIRR 346 DL+P +L+ GS+A + F G W+F D ++K+ I Sbjct: 308 DLFPRFTLSGLIGSVAGDTSDLFTGPAETRRVALGIDWTF--------LDHDRVKARIEA 359 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + ++ ++Q+TVL A++E E L ++ +L+ A+ ++++ L+ Y + Sbjct: 360 AGADSRAALASYQQTVLEALEEAETRLVRYQRAQQREERLEQAMNNAEQAVELARARYEE 419 Query: 407 GRYSLLDILDIER 419 G ++L E+ Sbjct: 420 GFIGYFEVLTAEQ 432 >gi|19716262|gb|AAL95702.1|AF360362_4 TrpC [Pseudomonas putida] Length = 484 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 124/458 (27%), Positives = 231/458 (50%), Gaps = 25/458 (5%) Query: 17 GCTVGPEYTKPH----MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GCT+GP++ +P P Q S+ L+WWE+F+D L+ L++ ++N Sbjct: 18 GCTLGPDFQRPESQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALIQRVAERN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS-------SYASISHRFI--PNLKTNS------T 117 L + A+ R+ ++ ++ AD PS S A S + P+ K Sbjct: 78 LDLQMASARLLQSRALRSTLAADEVPSVDMNAGYSRARNSADGLSDPSGKAGKEAFNLWQ 137 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R + + + Sbjct: 138 GDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRAVQHTLDV 197 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L + + +++LS + +G ++L + + A++ SIE+ +P+LE + R ++ N +L Sbjct: 198 TQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIEARLPSLE-ARRDDLINALSL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L L QS P IG+P++L RPDIR E +L + A IG+AK Sbjct: 257 LAAEPPRSLQAELLQSGEL-PAPQQKFAIGLPSELAERRPDIRQAEARLHAATASIGVAK 315 Query: 297 SDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D YPS+ L+GS+ + F G+++ ++FGP++ LPIF+ G++K + E+ QE Sbjct: 316 ADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELREAQQQE 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ VL A E+++ L N + L AV ++ ++ + Y +G L+ Sbjct: 376 AALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGAVDFLN 435 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L ++ A E + ++++ V LY A+G G+ Sbjct: 436 VLTVQGALLTSEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|322419323|ref|YP_004198546.1| NodT family RND efflux system, outer membrane lipoprotein [Geobacter sp. M18] gi|320125710|gb|ADW13270.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M18] Length = 476 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 127/469 (27%), Positives = 232/469 (49%), Gaps = 24/469 (5%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINI------DTLKWWES 55 + RA+ + LAGC TVGP Y P + P ++ + K D +WW S Sbjct: 6 VARALILSAALGLAGCVTVGPHYLAPELKA-PAKWQQLDDKGATQTTAAEDYDLSRWWLS 64 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 D L+ L++ AL + +L A ++ ++ AD P+ AS S + + + Sbjct: 65 LKDPLLSDLIEQALSASPDLLSAQAKLRESRARRSVAAADRLPTVTASGSAARSRSSEKS 124 Query: 116 STGQ--------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +G D+ W++D FG RR +E++ A+LD++ A + ++ + +++ Y++ Sbjct: 125 GSGSTSNLFSAGFDASWELDAFGGVRRSVEAAAADLDASQATLQGVQVTLAAEVAQIYVE 184 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++R+ IA L + ++L+ + G S + + + + + IPTLE S Sbjct: 185 LRTLQKRLGIARDNLASQSETLQLTQWRAQAGLVSTQDVEQALSNSEQTRAQIPTLETSL 244 Query: 227 RMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H + LLG P T LH ++ P+L + +GIPA+++R RPD+R E+KL Sbjct: 245 FEAEHRLDLLLGQTPGT--LHERLSKAGEL-PSLPSQVAVGIPAEMLRQRPDVRGAERKL 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A A++G+A++ YPS L+GSI ALT +S + PIFD GK++S Sbjct: 302 AAETARVGVAEAARYPSFKLSGSIGLEALTLGGVAGASAAKYSLLGGIAAPIFDAGKLRS 361 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + ++ ++ + ++++VL A++EVENAL +++ +++ L+ A + + ++ Sbjct: 362 QVAIQDAVREQAQVAYEQSVLTALQEVENALVALSRNQEREKALKSASTAAQSAAEMARQ 421 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G ++D ER VE L+ + + + LY A+G G+ Sbjct: 422 RYSAGLIDFQSVVDTERNVLSVEDSLAGTRGDGVLALIALYKALGGGWR 470 >gi|319796323|ref|YP_004157963.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315598786|gb|ADU39852.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 477 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 223/464 (48%), Gaps = 24/464 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNK 63 A F L ++LAGC VGP YT P P S ++L D ++ WW +D L+ Sbjct: 9 APFVLSALVLAGCAVGPTYTAPSDA--PVAIS-APERSLFANDAVQRDWWRQLDDPQLDA 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPN----------- 111 LV+ AL N I A R+ A+ + D P S R I Sbjct: 66 LVERALAANHDIRIAEARLLEARASQTEAELDRLPVVTVGASKTRGIAQGNSGAQPDARA 125 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L +S D+ W+IDLFG+ +R E++ A +++ A ++ ++ +++L +Y + R Sbjct: 126 LAQSSRAGFDASWEIDLFGRLKRLNEAATARTEASAADLEQVRIVAVAELARNYYEMRGA 185 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R+++ + L+ + ++ ++ + G + L +A + + ES +PT E + R Sbjct: 186 EQRLAVTRRTLESLRSSLLVTEAQVQTGRGLEGDLASAQANLATTESQLPTFETTRRQAA 245 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ L G E ++ Q L + IG DL+R RPD+ E+ LA S A Sbjct: 246 YRVAVLAGLRPAELDPMLRPQQLRV---LDKRLPIGDVGDLLRRRPDVLRAERGLAASTA 302 Query: 291 KIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +G ++LYP + G IAL + + +S P + P F G +K+ +R A Sbjct: 303 DVGATTAELYPRFDIGGFLGFIALRGSDLGSSSSRAFSVTPGVSWPAFRLGSVKARVRGA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ A+ +++TVL AI++VE+ALT ++++ + L A ++ L+ + YR+G Sbjct: 363 EARAEGDRALYEQTVLRAIEDVESALTGYGQNQQRLQSLVQAAARSGRAAELAEVRYREG 422 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + + ++ A+ S V LY A+G G+ Sbjct: 423 AAPYLSVLDAQRTLLRAQDAVAEAETASYTSLVALYKALGGGWQ 466 >gi|91789298|ref|YP_550250.1| RND efflux system outer membrane lipoprotein NodT [Polaromonas sp. JS666] gi|91698523|gb|ABE45352.1| RND efflux system, outer membrane lipoprotein, NodT [Polaromonas sp. JS666] Length = 486 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 231/474 (48%), Gaps = 32/474 (6%) Query: 8 FSLFIV--LLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSL 61 ++FIV L AGC VGP+Y +P P+ P Q+ ++ + D + WW F D L Sbjct: 7 LAIFIVAGLSAGCAVGPDYVRPDTPM-PQQYLGQPAVDQRHATAHADLVTWWTGFGDPLL 65 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------ 114 + V +A++QNL + QA+ R+ A+ + + A L PS S + R +L+T Sbjct: 66 TRFVTLAVEQNLDLAQASARVTQARAELGAANAALLPSGNVSGQAARAYQSLETPLGKVL 125 Query: 115 -NSTG----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 S G L + W++D+FG RR E++LA ++ A +L V ++ Sbjct: 126 SASPGFDRHGSSYETNLGASWELDVFGGLRRGKEAALAGYQASEAGAAATRLAVAAQTAD 185 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI R + R+ +A + ++ + +L + +G ++L + + E + + + +P L Sbjct: 186 TYIIIRGLQTRLGVARGQVQTQQELLSTINLLYGKGLAAELQVRQAEGALAQVRASVPVL 245 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + ++ + +LG P H M+ P G P +L+R RPD+ E Sbjct: 246 EAGLDVAMNALDVMLGTPPGT--HRMELADAGVIPAAPQITAAGSPGELLRRRPDLIVAE 303 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 ++LA S A+IG+A ++ YP LSL+G I ++ N F + + L +FD G Sbjct: 304 RRLAASNARIGVAIAEYYPKLSLSGLIGSATSVSGGNLFTSGASQAAGVLGLRWRLFDFG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I + I +A E ++ VL A ++VENA +++ + ++ L V+ ++ S Sbjct: 364 RINAQIDQARGQEAEMLAAYRLAVLRATEDVENAFSALVKREEQAVVLAQGVDSLGRARS 423 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y++G SL+++L + + + A+ + A++ V + A+G G+ P Sbjct: 424 ASFAAYQKGVLSLIEVLQADDNLLRASDARAQAQTESARAAVATFKALGGGWQP 477 >gi|254502896|ref|ZP_05115047.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Labrenzia alexandrii DFL-11] gi|222438967|gb|EEE45646.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Labrenzia alexandrii DFL-11] Length = 497 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 128/467 (27%), Positives = 226/467 (48%), Gaps = 40/467 (8%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINID-----------TLKWWESFNDTSLNKLVKIA 68 VGP++ +P P+L S G NL ++D ++ WW F D +LN L+ A Sbjct: 2 VGPDFERPEAPVLD---SWGKGANL-SVDHRTGFTTRSAASVPWWHVFKDEALNGLIAEA 57 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYA----SISHRF------IPNLK----- 113 +QN+ + A R+ A+ + R +LFP S + RF I +L+ Sbjct: 58 YRQNVELQAAGVRVYQARAQLGIARGELFPQVQQLKGNSENIRFSTQDPIIRDLERAGLV 117 Query: 114 ----TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + D+ W+ID++G+ RR ++S+ ANL++ A D A + + + +Y+ R Sbjct: 118 DSHISRVSAGFDAAWEIDIWGKIRRDVQSAKANLNANLASYDDALVTLTGDIAATYVTIR 177 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ + + + L KK++ L+ L+ G S+L + + + + IP E Sbjct: 178 ELQQLAASSRKNAALQKKSLNLTQLRLENGVASQLDVHEATVLYNNTLAAIPGYEAELAQ 237 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + +S LL P + +S P + + IG+PAD++R RPDIR E Sbjct: 238 AYNAMSVLLSEPPGKMKARFSGRSGF--PRVPAEVAIGVPADMLRRRPDIRQAEYIAGAQ 295 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+AK+DL+P+ +++G+I + D N F G T F P + G+I++N+R Sbjct: 296 SAQIGVAKADLFPAFTISGAIGVRADDFSNLFTGGATTALFNPGFSWNFLNYGRIRNNVR 355 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ QE +T++ TVL+A EVENALT K+ L+ ++ + S+ Y Sbjct: 356 VQDAKFQEALLTYENTVLSAYAEVENALTGFLRSKQQALYLRRSLRAARSSVGEVEAQYE 415 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S ++D +++ E L A+ + + V +Y +G G+ P Sbjct: 416 DGTASYNRVVDAQKSLLVAEERLIAAEANVLTNLVAVYKGLGGGWAP 462 >gi|289670143|ref|ZP_06491218.1| outer membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 467 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 117/429 (27%), Positives = 211/429 (49%), Gaps = 24/429 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ Sbjct: 1 MALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAESPVGNWWSQFDDPVLEQLVRD 59 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKT 114 AL N + A R+ A+ + R D P A S RF L Sbjct: 60 ALFANHDLRIAVSRVKQARAVFVERRLDQAPHITAQSSFDRREQQQVVAGNQRF---LTE 116 Query: 115 NSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y R +++ Sbjct: 117 QTTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFQLRGTQKQ 176 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + L +L+ ++ GA S+L + A +K+IE+DIP LE + H + Sbjct: 177 LEVSKRTLANLHDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRL 236 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG + ++ P P+ +G A L+R RPD+R E++LA + A++G Sbjct: 237 AVLLGQQPDALDATLVART---MPAFARPLPLGDTAGLLRQRPDVRVAERRLAAATAQVG 293 Query: 294 IAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P +S++G + ++ G WS P + FD G +++ +R +++ Sbjct: 294 VATADLFPRISVSGFVGFLSGDAARLTEGNAKAWSITPSISWAAFDFGTVRARLRASKAQ 353 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ +Q+ VL A+++ ENAL + + + + +++ L+ I YR+G Sbjct: 354 AEGALAQYQQAVLLALEDTENALIGYGRQQARLAIVVEQAKAARRAEQLAQIRYREGSED 413 Query: 411 LLDILDIER 419 L +LD +R Sbjct: 414 FLTLLDAQR 422 >gi|289663002|ref|ZP_06484583.1| outer membrane protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 474 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 117/428 (27%), Positives = 211/428 (49%), Gaps = 24/428 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VGP+Y +P P T + WW F+D L +LV+ A Sbjct: 9 ALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDPAYSAESPVGNWWSQFDDPVLEQLVRDA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVSRVKQARAVFVERRLDQAPHITAQSSFDRREQQQVVAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++++ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKQL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 EVSKRTLANLHDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAQAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + ++ P P+ +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQQPDALDATLVART---MPAFARPLPLGDTAGLLRQRPDVRVAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + ++ G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLSGDAARLTEGNAKAWSITPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+ VL A+++ ENAL + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQAVLLALEDTENALIGYGRQQARLAIVVEQANAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIER 419 L +LD +R Sbjct: 422 LTLLDAQR 429 >gi|313500498|gb|ADR61864.1| TrpC_2 [Pseudomonas putida BIRD-1] Length = 484 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/458 (27%), Positives = 232/458 (50%), Gaps = 25/458 (5%) Query: 17 GCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GCT+GP++ +P P P Q S+ L+WWE+F+D L+ L++ ++N Sbjct: 18 GCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALIQRVAERN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS-------SYASISHRFI--PNLKTNS------T 117 L + A+ R+ ++ ++ AD PS S A S + P+ K Sbjct: 78 LDLQMASARLLQSRALRSTLAADEVPSVDMNAGYSRARNSADGLSDPSGKAGKEAFNLWQ 137 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R + + + Sbjct: 138 GDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRAVQHTLDV 197 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L + + +++LS + +G ++L + + A++ SIE+ +P+LE + R ++ N +L Sbjct: 198 TQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIEARLPSLE-ARRDDLINALSL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L L QS P IG+P++L RPDIR E +L + A IG+AK Sbjct: 257 LAAEPPRSLQAELLQSGEL-PAPQQKFAIGLPSELAERRPDIRQAEARLHAATASIGVAK 315 Query: 297 SDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D YPS+ L+GS+ + F G+++ ++FGP++ LPIF+ G++K + E+ QE Sbjct: 316 ADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELREAQQQE 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ VL A E+++ L N + L AV ++ ++ + Y +G L+ Sbjct: 376 AALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGAVDFLN 435 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L ++ A E + ++++ V LY A+G G+ Sbjct: 436 VLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|313498627|gb|ADR59993.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida BIRD-1] Length = 471 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 136/471 (28%), Positives = 233/471 (49%), Gaps = 26/471 (5%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWES 55 MN+L+ + SL + LA C VGP+Y P P Q +G+ D + WW+ Sbjct: 1 MNLLKPLTPSLLALALAACAVGPDYQAPATE--PAQ--LGSDVQAKAYDRSRFESLWWKQ 56 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS--ISHRFIPN 111 F+D LN+LV+ +L N + A R+ +A+ D FP +S AS I IP Sbjct: 57 FDDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDIGKGQIPG 116 Query: 112 LKTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T LD W++DLFG+ +R IE+S A A A + ++++I++L+ +Y Sbjct: 117 QTTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAY 176 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + R IA L +++ ++ G + L +V+ +A + +E+ +P L+ Sbjct: 177 GQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQA 236 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H I+TLLG + S P + + +G P +L+R RPDIR E++ Sbjct: 237 EQARARHRIATLLGQRPDALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQ 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIK 341 LA + A +G+A +DL+P +SL+G + T S G + W+ GP + FD G ++ Sbjct: 294 LAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVR 353 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R A++ A+ +++ VL A++E NA + ++ ++ + L + +K+ L+ Sbjct: 354 ARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELAS 413 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YR+G L +LD ER E + + L + V +Y A+G G+ P Sbjct: 414 IRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQP 464 >gi|26990140|ref|NP_745565.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida KT2440] gi|24985075|gb|AAN69029.1|AE016535_3 multidrug efflux RND outer membrane protein OprN [Pseudomonas putida KT2440] Length = 471 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 135/470 (28%), Positives = 234/470 (49%), Gaps = 24/470 (5%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESF 56 MN+L+ + SL + LA C VGP+Y P P Q S + + ++L WW+ F Sbjct: 1 MNLLKPLTPSLLALALAACAVGPDYQAPATE--PAQLSSDVQAKAYDRSRFESL-WWKQF 57 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS--ISHRFIPNL 112 +D LN+LV+ +L N + A R+ +A+ D FP +S AS + IP Sbjct: 58 DDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQ 117 Query: 113 KTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T LD W++DLFG+ +R IE+S A A A + ++++I++L+ +Y Sbjct: 118 TTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYG 177 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + R IA L +++ ++ G + L +V+ +A + +E+ +P L+ Sbjct: 178 QLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAE 237 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H I+TLLG + S P + + +G P +L+R RPDIR E++L Sbjct: 238 QARARHRIATLLGQRPDALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQL 294 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIKS 342 A + A +G+A +DL+P +SL+G + T S G + W+ GP + FD G +++ Sbjct: 295 AAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRA 354 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +R A++ A+ +++ VL A++E NA + ++ ++ + L + +K+ L+ I Sbjct: 355 RLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASI 414 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR+G L +LD ER E + + L + V +Y A+G G+ P Sbjct: 415 RYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQP 464 >gi|299769419|ref|YP_003731445.1| RND efflux system, outer membrane lipoprotein, NodT [Acinetobacter sp. DR1] gi|298699507|gb|ADI90072.1| RND efflux system, outer membrane lipoprotein, NodT [Acinetobacter sp. DR1] Length = 478 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/472 (27%), Positives = 236/472 (50%), Gaps = 30/472 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNK 63 + + +LA CTVGP Y +P + L P Q+ + + + D WW+SFND L + Sbjct: 8 LLPILTSILAACTVGPNYKRPSISL-PEQYLGARLNSPSDETKADIEVWWKSFNDPQLTR 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRF------ 108 V +AL+QNL + QA R+ A+ ++ +V A L P +Y S+ Sbjct: 67 YVTLALKQNLDLTQAYTRVTQAQASLSAVNASLRPIGSVDAQAAKAYQSVETPLGQVLNS 126 Query: 109 IPNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 IPN + + L + W++D+FG RR ES+LAN ++ A +L V ++ Y Sbjct: 127 IPNFDRHGSSYEANLSATWELDIFGGLRRDRESALANYQASNAGASAVRLMVAAQTANLY 186 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I+ R + R+ IA Q L +K + + L +++G S+ + + +A + +++ +P L Sbjct: 187 INIRGLQSRLDIAQQQLQTQQKLLSIIQLLYSKGLASEFQVKQAKANVAQVQAVVPALGM 246 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++ + +LG P T + + PN+ G P DL+R RPD+ E+ Sbjct: 247 NLDIAMNALDVMLGTVPGTHRAELAEVKPIPVIPNI---TETGTPRDLLRRRPDLIMAER 303 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +LA S A+IG A ++ YP +SL G S A N F + L +FD G+I Sbjct: 304 QLAASNARIGSAIAEYYPKVSLGGLIGSAATVSGNLFSSGANQAAGLLGLRWRLFDFGRI 363 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 S IR A+ E+ +Q VL+A ++VEN+L+++++ ++ + LQ + ++ Sbjct: 364 NSEIRLAKGQEAEKLAAYQLAVLHAAEDVENSLSTLSKRQEQLVALQDGENALHLAQKIA 423 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +I Y++G S +++L + + + A+ A + V +Y ++G G+ P Sbjct: 424 LIAYQKGINSRIEVLQADSSALQFTDRKVQAQTDSALAAVAIYKSLGGGWQP 475 >gi|307726120|ref|YP_003909333.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586645|gb|ADN60042.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 523 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/466 (28%), Positives = 228/466 (48%), Gaps = 26/466 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + S+ L A +VGP++ +P + L S+ WW++FND L+ L Sbjct: 17 VVSMSAALAACISVGPDFAEPELTLEKQWLESLPPLAQAAPPAQAAWWKAFNDPVLSALE 76 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYA-SISHRFIPNLKTNSTGQL---- 120 + A Q+NL++ A I A+ + +L P + + S+ I T+ G L Sbjct: 77 ERAYQRNLSLQVAGLHIFKARAQLAISAENLLPQTGSVSVGANHI---NTSGVGPLPPTH 133 Query: 121 --------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++ W++D +G+ RR IE+ A L + A D A +++ + + +YID R + Sbjct: 134 LWAEHFHANAGWELDFWGKYRRQIEADRAQLRVSEAAYDNALVSMFADVANAYIDLRALE 193 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +RI +A Q L + ++ L+ ++ +GA+S+L + + + E+ IP L K+ + Sbjct: 194 QRIVVAQQNLKSVQDSLALTQARYKRGASSQLDVEQAATLVAETEAQIPPLIKARAQDRD 253 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LL P Q + ++ P I++GIPADL+R RPD+R A A Sbjct: 254 TLAVLLADPPDAV--DAQLKGSSAIPVAPTQIDVGIPADLLRRRPDVREAALNAAAQSAL 311 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------FGPKLYLPIFDKGKIKSNIR 345 IG AK+ LYPSLSL G L+ + W F + LPIFD+G++K+ +R Sbjct: 312 IGAAKAKLYPSLSLTGLFGLSSGEQHGIGLSQWGSKTIGLFSAGISLPIFDRGQLKNAVR 371 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++S QE + +Q TVL A KEVE+A+ ++ + A + ++++ L+ YR Sbjct: 372 IQDASFQEAVLDYQNTVLQAQKEVEDAIAALRTSLDALAASVRASDASQRALRLANAQYR 431 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + +LD R+ + L+ + A + V LY A+G G+ Sbjct: 432 SGSVTYDSVLDASRSALRDGDALAQNQGIAALAAVSLYRALGGGWE 477 >gi|26988008|ref|NP_743433.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida KT2440] gi|24982726|gb|AAN66897.1|AE016318_4 multidrug efflux MFS outer membrane protein, putative [Pseudomonas putida KT2440] Length = 484 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 125/458 (27%), Positives = 230/458 (50%), Gaps = 25/458 (5%) Query: 17 GCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GCT+GP++ +P P P Q S+ L+WWE+F+D L+ L++ ++N Sbjct: 18 GCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALIQRVAERN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS-------SYASISHRFI--PNLKTNS------T 117 L + A+ R+ ++ ++ AD PS S A S + P+ K Sbjct: 78 LDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKAGKEAFNLWQ 137 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R + + + Sbjct: 138 GDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRAVQHTLDV 197 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L + + +++LS + +G ++L + + A++ SIES +P+LE R ++ N +L Sbjct: 198 TQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQ-RDDLINALSL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L L Q P IG+P++L RPDIR E +L + A IG+AK Sbjct: 257 LAAEPPRSLQAELLQGGEL-PAPQQKFAIGLPSELAERRPDIRQAEARLHAATASIGVAK 315 Query: 297 SDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D YPS+ L+GS+ + F G+++ ++FGP++ LPIF+ G++K + E+ QE Sbjct: 316 ADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELREAQQQE 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ VL A E+++ L N + L AV ++ ++ + Y +G L+ Sbjct: 376 AALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGAVDFLN 435 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L ++ A E + ++++ V LY A+G G+ Sbjct: 436 VLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|162149558|ref|YP_001604019.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161788135|emb|CAP57739.1| putative outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 558 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 128/505 (25%), Positives = 238/505 (47%), Gaps = 62/505 (12%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP---HMPLLPTQFSIGN--------SKNLINID----- 48 RA VL GC VGP++ KP P Q +G+ S+ ++ D Sbjct: 34 RAAIVGLSVLATGCAVGPDFHKPVAWAPPHWAGQHWVGSAPGSTSGASRPPVSSDISDAA 93 Query: 49 -TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH- 106 WW+ F+D L+ L + QNL++ AT R+ ++ + A+ +P A+ S+ Sbjct: 94 PDPAWWDVFHDPELSALERRVAGQNLSVAIATARLAQSRSQLRIAGAERYPGLSAAGSYT 153 Query: 107 ----------RFIPNLK------------TNSTGQ------------LDSDWKIDLFGQ- 131 R + ++ + +GQ +D+ W++DL+G+ Sbjct: 154 RSQYSTKELQRIVSDVGKSGNLPLGGVNLADQSGQFTIPLLDQWRDSIDATWEVDLWGRV 213 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 RR E++ A+L ++ + +++L Y+ R + ++ I D ++++LS Sbjct: 214 RRQYEAAGADLQASVEERRGVLTAQMAELARDYVALREAQAQLRILLDNRDTASRSLDLS 273 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 + G S+L + ++++ S+ + IP +E+ + V+ +S LLG P + + Sbjct: 274 RQRNQAGLVSELDVQSAQSQLDSVTARIPQMEQQIALQVNALSLLLGAPPSALAGELL-- 331 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 ++ P + + G+P++L R RPDIR E +L + A++G A ++ YP ++++ Sbjct: 332 TDRDIPPVPPRVPAGVPSELARRRPDIRQAEAQLHAATAQVGEAVAEFYPRVTIDAGFGF 391 Query: 312 T----HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 D F +N W+ GP + LPIF G+++ + ++ QE IT++ TVL A Sbjct: 392 QSLSFRDFGF--WNARAWNVGPSISLPIFQGGRLRGQLELRHAAEQEAAITYRRTVLGAW 449 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EV+NALT+ +++ L V ++S+ L+ YR G + L +LD ER + Sbjct: 450 HEVDNALTAYRDEQMRHDSLARQVADDQRSLDLARDQYRHGMVTFLTVLDAERRVLGSQT 509 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 DL+ + L+ V LY A+G G+ Sbjct: 510 DLTSSTASLSTDLVQLYSALGGGWE 534 >gi|329113779|ref|ZP_08242550.1| Antibiotic efflux pump outer membrane protein ArpC [Acetobacter pomorum DM001] gi|326696789|gb|EGE48459.1| Antibiotic efflux pump outer membrane protein ArpC [Acetobacter pomorum DM001] Length = 547 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/488 (25%), Positives = 237/488 (48%), Gaps = 52/488 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN---LINIDTLK-----WWESFNDTSLN 62 + +LAGC VGP+Y KP P+Q+ +K+ ++++ T + WW FND L Sbjct: 50 LVFMLAGCMVGPDYKKPDT-WSPSQWQRAANKDTSQMLSVPTTQAPDPQWWAIFNDPELT 108 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-----------FIPN 111 L K QNL + QATE+ ++ +L A+ FP AS S+R + Sbjct: 109 SLEKRLADQNLDVQQATEQFAVSRGQLLLAGAERFPDLAASGSYRRAQYSSKQLQRIVER 168 Query: 112 LKTNSTGQ------------------------LDSDWKIDLFGQ-RRHIESSLANLDSAY 146 + N+ G + + W++DL+G+ RR E++ A +++ Sbjct: 169 IGENAAGTGMGEMLSAQSSSISIPLLNQWQDGVQASWEVDLWGRVRRQYEAAKAYMNATM 228 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 + + ++L Y+ R+ +E++ I + D ++LS ++ G S+L + Sbjct: 229 EERRGILIARQAELASDYMTLRNLQEQLRITKENRDAASAILQLSSSRYKSGLVSELDVD 288 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 +E++ + IP E+ M ++ I+ L+G P +++ + + + +G Sbjct: 289 SARSEVERTSALIPQFEQRIAMQINAINLLMGAPPGGLNTELEQTAGIP--PVPPQVPVG 346 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNT 322 +P++L RPDIR ++L + A++G A++D YP ++++ D F + Sbjct: 347 LPSELAERRPDIREAGEELHAATAEVGQAEADFYPKVTIDAGFGFQSFSFRDMGF-WSSR 405 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ GP + LPIF G++ + ++S + + +++TVLNA KEV+NALT+ ++K Sbjct: 406 MWNVGPAITLPIFQGGRLTGQLHIKKASQKAAALRYRKTVLNAWKEVDNALTAYQAEQKR 465 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +++ V +S+ L+ Y+ G S L +LD +R + + L+ + ++ + V L Sbjct: 466 NQNIRNQVAADARSLELAQSQYKHGLQSYLQVLDTQRRLLQSQTQLADSTATISGNLVQL 525 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 526 YNALGGGW 533 >gi|209543964|ref|YP_002276193.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209531641|gb|ACI51578.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 482 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 133/472 (28%), Positives = 229/472 (48%), Gaps = 32/472 (6%) Query: 6 AIFSL-FIVLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A F+L + LA CTVGP + +P + P + G+ IDT +WW SF+D L Sbjct: 9 AAFALPLAIALASCTVGPAFHRPRIDAPPAWGAEPKAGSQTYAGAIDT-RWWRSFDDAEL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-------YASISHRFIPNLKT 114 LV +QNL + A +RI A+ + +V A P + Y +S I +L Sbjct: 68 TGLVDRLGRQNLDLQIAAQRIREARAQMKAVAAAGLPQANWSGSYAYRQLSTHGIFSLAE 127 Query: 115 NSTGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 S G L + W +DLFG RR +E+ A+ +A A A L +S L S Sbjct: 128 PSPGASLNFNLYSNVLSTSWDLDLFGAIRRGVEAQRADQAAALAARRAAALAAVSDLAAS 187 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R + I + L + N++L +F G + L + + A++ S+ES +P LE Sbjct: 188 YMQLRGVQAPQVILQSNIALARTNLQLVRDRFANGVAANLDVSQAAAQLASMESGLPELE 247 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++ I LL P ++ ++ QP L + + +G+P DL R RPD+ E Sbjct: 248 NAEAALINAIGLLLSEPPRALEGELKNRAP--QPRLPVSVPVGLPLDLTRRRPDVLEAEA 305 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 +L + A++G A + YP ++L G S A + S P +S GP L +P+F G Sbjct: 306 RLHAATAEVGAAIAAFYPDITLAGNMGTESFAASDFFSLPA--KQFSVGPTLNVPVFQGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + + +++ QE +TW+ TVLNA +E ++ALT+ + + + A+ + + + Sbjct: 364 RLIARLAFRKAAQQEAVLTWRNTVLNAWREADDALTAYAKSQSTHALTEQALLQDRAAYT 423 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y +G L+++ + A + L+ ++ + + V LY A+G G+ Sbjct: 424 AARQRYGEGATDYLNVVATQAALLSTQSALADSQTRSETTLVALYRALGGGW 475 >gi|114048311|ref|YP_738861.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-7] gi|113889753|gb|ABI43804.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-7] Length = 517 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 133/467 (28%), Positives = 233/467 (49%), Gaps = 28/467 (5%) Query: 3 ILRAIFSLFIVLLAGCTV-GPEYTKPHMPLLPTQ-------FSIGNSKNLINIDTLKWWE 54 + R + LL+GCTV GP+Y +P +P + T FS S + D +WW Sbjct: 7 VPRLVIGGACALLSGCTVLGPDYQQPEVPEIQTWQSASSQLFSAAPSAS----DYQQWWS 62 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 D L+ L+ AL +N + A RI A+ L + L + +++ +T Sbjct: 63 QLQDPVLSSLIDEALLKNPDVRIAGLRILEAQAQ-LGIAESLRNPQLTQATAQWLGAGQT 121 Query: 115 ---NST------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NST + W++D +G+ +R IES+ AN + AQ D ++ +I+++ Y Sbjct: 122 QSGNSTSGSSYGAAFNLGWELDFWGKFQRGIESADANYFATIAQYDDVQVLMIAQVAQLY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R + R+ IAH + K+++E++ +F G T++L + + + + S IPTLE Sbjct: 182 VTIRTLEARLQIAHDNAQIQKRSLEITQHQFHSGNTAELDVQQAKTQYLGTLSTIPTLET 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + R + + +STLL A L M + P + + +PADL+R RPD+R E++ Sbjct: 242 NLRQSQNALSTLLAR-APGPLPEMASNTGVL-PQGQLALVTEMPADLLRRRPDVRTAERQ 299 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSN 343 LA +IGIA+SDLYPS++L G++ L S G++ W GP + I D G++ + Sbjct: 300 LATQSGQIGIAESDLYPSITLAGTLGLNATGS--GHSIFSWGVGPSISWNILDSGRLTNQ 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I ++ ++ + ++ETV A +EV++A + +T L E +S+ ++ Sbjct: 358 ILVQDARFEQLHEVYRETVFKAAREVDDAAIAFANSATEITLLTQTGEAASRSLEIANTQ 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR+G +LD +RA + L ++ + + LY A+G G+ Sbjct: 418 YREGMADFQRVLDSQRALFSQQERLVNSRGAHIGNLITLYKALGGGW 464 >gi|209544795|ref|YP_002277024.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209532472|gb|ACI52409.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 532 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/505 (25%), Positives = 238/505 (47%), Gaps = 62/505 (12%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP---HMPLLPTQFSIGN--------SKNLINID----- 48 RA VL GC VGP++ KP P Q +G+ S+ ++ D Sbjct: 8 RAAIVGLSVLATGCAVGPDFHKPVAWAPPHWAGQHWVGSAPGSTSGASRPPVSSDISDAA 67 Query: 49 -TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH- 106 WW+ F+D L+ L + QNL++ AT R+ ++ + A+ +P A+ S+ Sbjct: 68 PDPAWWDVFHDPELSALERRVAGQNLSVAIATARLAQSRSQLRIAGAERYPGLSAAGSYT 127 Query: 107 ----------RFIPNLK------------TNSTGQ------------LDSDWKIDLFGQ- 131 R + ++ + +GQ +D+ W++DL+G+ Sbjct: 128 RSQYSTKELQRIVSDVGKSGNLPLGGVNLADQSGQFTIPLLDQWRDSIDATWEVDLWGRV 187 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 RR E++ A+L ++ + +++L Y+ R + ++ I D ++++LS Sbjct: 188 RRQYEAAGADLQASVEERRGVLTAQMAELARDYVALREAQAQLRILLDNRDTASRSLDLS 247 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 + G S+L + ++++ S+ + IP +E+ + V+ +S LLG P + + Sbjct: 248 RQRNQAGLVSELDVQSAQSQLDSVTARIPQMEQQIALQVNALSLLLGAPPSALAGELL-- 305 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 ++ P + + G+P++L R RPDIR E +L + A++G A ++ YP ++++ Sbjct: 306 TDRDIPPVPPRVPAGVPSELARRRPDIRQAEAQLHAATAQVGEAVAEFYPRVTIDAGFGF 365 Query: 312 T----HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 D F +N W+ GP + LPIF G+++ + ++ QE IT++ TVL A Sbjct: 366 QSLSFRDFGF--WNARAWNVGPSISLPIFQGGRLRGQLELRHAAEQEAAITYRRTVLGAW 423 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EV+NALT+ +++ L V ++S+ L+ YR G + L +LD ER + Sbjct: 424 HEVDNALTAYRDEQMRHDSLARQVADDQRSLDLARDQYRHGMVTFLTVLDAERRVLGSQT 483 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 DL+ + L+ V LY A+G G+ Sbjct: 484 DLTSSTASLSTDLVQLYSALGGGWE 508 >gi|322832624|ref|YP_004212651.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321167825|gb|ADW73524.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 483 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 131/467 (28%), Positives = 219/467 (46%), Gaps = 30/467 (6%) Query: 13 VLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 LLAGC VGP+Y +P PL Q ++ WW+ F D L++ V AL Sbjct: 14 ALLAGCAVGPDYHRPDAPLPERYQAQSAVQQRSASRPASFAVWWDGFGDPLLSQYVTDAL 73 Query: 70 QQNLTILQATERINAAKE-------------NILSVRADLFPSSYASISHRFIPNLKTNS 116 QNL + QAT R+ ++ N+ A + S+ + N Sbjct: 74 AQNLDLAQATARMAQSRAGLGAATAALLPSGNVSGQAARAYQSAETPLGQVLSATPDYNR 133 Query: 117 TG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G L++ W+ID+FG RR +++LA+ ++ A V +L V ++ +YI R Sbjct: 134 YGNSYETDLNASWEIDVFGGLRRGRQAALADYQASEAGVAATRLAVAAQTADTYITLRGL 193 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + R+SIA + + ++ +E L +G + + E E+ +++ +P L + Sbjct: 194 QTRLSIAEKQVSTQQELLEKVQLLNAKGLAPAYQVRQTEGELAQVQATVPVLRTGLDAAM 253 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + +LG P H Q P + G PADL+R RPDI E+ LA S A Sbjct: 254 NALDVMLGTP--PGTHRSQLALPGAIPQAPQITSTGTPADLLRRRPDIIVAERHLAASSA 311 Query: 291 KIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A S+ YP SL+ + A++ DN F G + + L +FD G+I + I + Sbjct: 312 RIGVAISEYYPKFSLSALLGSATAMSGDNLFSGGASQSAAVLGLRWRLFDFGRINAQIDQ 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ E ++ +VL A ++VENA ++ +N + + T + L S S I YR Sbjct: 372 AKGQEAEALAAYRLSVLRATEDVENAFSALVNRETQAATLTRGETALASARQS-SFIAYR 430 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 QG SL+D+L + + + A+ + A++ V + A+G G+ P Sbjct: 431 QGTASLMDVLHNDENLLQASDARAQAQTESARAAVATFRALGGGWQP 477 >gi|331016496|gb|EGH96552.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 465 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 233/449 (51%), Gaps = 24/449 (5%) Query: 21 GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 GP+Y P + + + ++TL WW+ F D +LNKLV +L N + A Sbjct: 22 GPDYKAPVTATATLASAAKGNYDRSKVNTL-WWQQFEDPTLNKLVAQSLDGNRDLRVAFA 80 Query: 81 RINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKTNSTGQLDSDWKIDL 128 R+ AA+ V D+ P +S AS I+ R + N + G LD W++DL Sbjct: 81 RLKAARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSERYDLG-LDMAWELDL 138 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA L +K+ Sbjct: 139 FGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNLTNQQKS 198 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLH 246 ++ G ++L +V+ +A + ++E+ +P L+ + I+TLLG P T + Sbjct: 199 QGITTQLRDAGVGNELDVVRADARLAAVEATVPQLQAEQARQRNRIATLLGERPDTLSVD 258 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 S + P + + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL+ Sbjct: 259 L----SPSKLPAIAKALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSLS 314 Query: 307 GSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G + T S G + WS GP + FD G +++ IR A++ A+ +++ VL Sbjct: 315 GFLGYTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVL 374 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A++E ENA + ++ ++ + L + + + L+ + YR+G L +LD ER Sbjct: 375 LALEESENAFSDYDKRQQRLVALMRQSDASRSAARLASVQYREGTADFLVLLDAERERLA 434 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + A+ +L + V +Y A+G G+ P Sbjct: 435 AEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|323529603|ref|YP_004231755.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323386605|gb|ADX58695.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 523 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 132/458 (28%), Positives = 226/458 (49%), Gaps = 27/458 (5%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LAGC +VGP++ +P L F S+ + WW++FND L L + A Q+N Sbjct: 24 LAGCASVGPDFKEPETTLEKQWFESLPPAAQAAPAAEAAWWKAFNDPVLTALEERAYQRN 83 Query: 73 LTILQATERINAAKENILSVRADLFPSSYA-SISHRFIPNLKTNSTGQL----------- 120 L++ A I A+ + S +L P + + S+ I T+ G L Sbjct: 84 LSLQVAGLHIFKARAQLASGVENLLPQTGSVSVGANHI---NTSGVGPLPPTHLWAEHFH 140 Query: 121 -DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ++ W++D +G+ RR IES A L + A D A +++ + + +YID R ++RI +A Sbjct: 141 ANAGWELDFWGKYRRQIESDRAQLRVSEAAYDNALVSMFADVANAYIDLRALEQRIVVAQ 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q L + ++ L+ ++T+GA+S+L + + + E+ IP L K+ + ++ LL Sbjct: 201 QNLKSVQDSLALTKARYTRGASSQLDVEQAATLVAETEAQIPPLIKARAQDRDTLAVLLA 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P Q + ++ P I++GIPADL+R RPD+R A A IG AK+ Sbjct: 261 DPPDAV--DAQLKGSSAVPVAPTQIDVGIPADLLRRRPDVRQAALNAAAQSALIGAAKAK 318 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWS------FGPKLYLPIFDKGKIKSNIRRAESSAQ 352 LYPS SL G L+ + W + LPIFD+ ++++ +R +++ Q Sbjct: 319 LYPSFSLTGLFGLSSGEQHGIGLSQWGSKTIGLLSAGVSLPIFDRAQLQNAVRIQDAAFQ 378 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E + +Q TVL A KEVE+A+ ++ + A + ++++ L+ YR G + Sbjct: 379 EAVLDYQNTVLQAQKEVEDAIAALRTSLDALAASARASDASQRALRLANAQYRSGSVTYD 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD R+ + L+ + A + V LY A+G G+ Sbjct: 439 SVLDASRSALRDGDSLAQNQGIAALAAVSLYRALGGGW 476 >gi|152984148|ref|YP_001347688.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150959306|gb|ABR81331.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 479 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 116/460 (25%), Positives = 233/460 (50%), Gaps = 25/460 (5%) Query: 15 LAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQ 70 L C++GP++T+P P Q + ++ + + L +WW F D L+ L++ + Sbjct: 14 LGACSLGPDFTRPAQDAPAAWPQPTAHDTPSRLAAAPLAAQWWTLFGDARLSALLERVQR 73 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN------ 115 NL + A R+ ++ S+ D PS AS +++ F P+ K Sbjct: 74 TNLDLRSAAARLQQSRAIRHSLGGDALPSVDASGTYQRQRTTSAGLFDPSGKAGKGNYNH 133 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + D+ W++D +G+ RR +E++ A ++++ ++ +++V+++ YI R + R Sbjct: 134 ALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNRE 193 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I L+ ++++EL+ + G + L + + A++ S+E+ +P LEK ++ + Sbjct: 194 RIVRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPELEKRQAHLLNALG 253 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G L + +P +P+ G+P++L + RPDIR E +L + A IG+ Sbjct: 254 YLVGASPGSLLAELGPAREIPRPPGSVPV--GLPSELAQRRPDIRIAEARLHAATASIGV 311 Query: 295 AKSDLYPSLSLNGSIALT--HDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+D YP ++LNG+ +S ++ ++ GP LPIF+ G+++ + E+ Sbjct: 312 AKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQQ 371 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 QE I +Q TVL A +EV++A+ +++ +L AV +++++ + YR G Sbjct: 372 QEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVMQNRRALESAREQYRAGAVDF 431 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + + ++ + V+LY A+G G++ Sbjct: 432 LSVLDSQRQLLDNQEQQVGSVEAVSLTLVNLYKALGGGWS 471 >gi|146311525|ref|YP_001176599.1| RND efflux system outer membrane lipoprotein [Enterobacter sp. 638] gi|145318401|gb|ABP60548.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter sp. 638] Length = 485 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 224/465 (48%), Gaps = 28/465 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+Y +P PL Q ++ WW+ F D L++ V AL Sbjct: 15 LLAGCAVGPDYQRPDAPLAERYQAQSAVQQRTASRPARFAVWWDGFGDPLLSQFVMDALA 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS----YASISHRFI-----------PNLK-- 113 QNL + QAT R+ ++ + + A L PS A+ +H+ + P+ Sbjct: 75 QNLDLAQATARMAQSRAGLGNATAALLPSGNISGQAARAHQSVETPLGQVLSSTPDYSRY 134 Query: 114 TNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 NS L++ W+ID+FG RR +++LA+ ++ A V +L V ++ YI R + Sbjct: 135 GNSYETDLNATWEIDVFGGLRRGRQAALADYQASEAGVVATRLAVAAQTADIYITLRGLQ 194 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++IA + + + +E L +G + + + E E+ +++ +P L ++ Sbjct: 195 ARLAIAEKKVRTQQALLEKVQLLHRKGLAPEYQVRQTEGELAQVQAIVPALRTGLDAAMN 254 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + +LG P H Q S P + G PADL+R RPDI E+ LA S A+ Sbjct: 255 ALDVMLGTPPGT--HRAQLDSPGVIPQAPQITSTGTPADLLRRRPDIIVAERHLAASSAR 312 Query: 292 IGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG+A S+ YP+ SL+ + A++ +N F G + + L +FD G+I + I +A Sbjct: 313 IGVAVSEYYPTFSLSALLGSATAISSNNLFSGSASQSAGVLGLRWRLFDFGRINAEIDQA 372 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E ++ +VL+A ++VENA +++ + T L + + S + ++QG Sbjct: 373 NGQEAEALAAYRLSVLHATEDVENAFSALVNSESQATTLTNGESALASARQSSFVAFQQG 432 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SL+D+L + + + A+ A++ V + A+G G+ P Sbjct: 433 TASLIDVLRNDETLLQASDARAQAQTDSARAAVATFRALGGGWQP 477 >gi|330875376|gb|EGH09525.1| outer membrane efflux protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 465 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/450 (29%), Positives = 235/450 (52%), Gaps = 26/450 (5%) Query: 21 GPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 GP+Y P P + GN + ++TL WW+ F D +LNKLV +L N + A Sbjct: 22 GPDYKAPVTAPATLASAAKGN-YDRSKVNTL-WWQQFEDPTLNKLVAHSLDGNRDLRVAF 79 Query: 80 ERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKTNSTGQLDSDWKID 127 R+ AA+ V D+ P +S AS I+ R + N + G LD W++D Sbjct: 80 ARLKAARAIRDDVANDVMPVVTSRASSDLGKGQQPGITERRV-NSERYDLG-LDMAWELD 137 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA L +K Sbjct: 138 LFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNLTNQQK 197 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFL 245 + ++ G ++L +V+ +A + ++E+ +P L+ + I+TLLG P T + Sbjct: 198 SQGITTQLRDAGVGNELDVVRADARLAAVEATVPQLQAEQARQRNRIATLLGERPDTLSV 257 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S + P + + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL Sbjct: 258 DL----SPSKLPAIVKALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSL 313 Query: 306 NGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 +G + T S G + WS GP + FD G +++ IR A++ A+ +++ V Sbjct: 314 SGFLGYTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQV 373 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A++E ENA + ++ ++ + L + + + L+ + YR+G L +LD ER Sbjct: 374 LLALEESENAFSDYDKRQQRLVALMRQSDASRSAARLASVQYREGTADFLVLLDAERERL 433 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + A+ +L + V +Y A+G G+ P Sbjct: 434 AAEDSQAQAQIELYRGIVAIYKALGGGWQP 463 >gi|152984713|ref|YP_001348103.1| outer membrane protein OprN precursor [Pseudomonas aeruginosa PA7] gi|150959871|gb|ABR81896.1| outer membrane protein OprN precursor [Pseudomonas aeruginosa PA7] Length = 472 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 233/461 (50%), Gaps = 20/461 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +FSL L+ CTVGP+Y P + + ++L WW+ F+D +LN+LV Sbjct: 16 GLFSLLA--LSACTVGPDYRTPDTAAAKIDATASEPYDRSRFESL-WWKQFDDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ-- 119 + +L N + A R+ AA+ V D FP + A I P + + Sbjct: 73 EQSLTGNRDLRVAFARLRAARALRDDVANDRFPVVTSRASADIGKGQQPGVTEDRVNSER 132 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LD+ W++DLFG+ RR +ESS A ++A A + ++++I++L+ +Y R + R Sbjct: 133 YDLGLDTAWELDLFGRIRRQLESSDALSEAAEADLQQLQVSLIAELVDAYGQLRGAQLRE 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA L+ K++ +L+ G ++L +++ +A + + + +P L+ + H I+ Sbjct: 193 KIALSNLENQKESRQLTEQLRDAGVGAELDVLRADARLAATAASVPQLQAQAERSRHRIA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TLLG E + S P + + IG P +L+R RPDIR E++LA S A++G+ Sbjct: 253 TLLGQRPEELTVDL---SPRDLPAISKALPIGDPGELLRRRPDIRAAERRLASSTAEVGV 309 Query: 295 AKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +SL+G + T S G N WS GP + FD G +++ +R A + A Sbjct: 310 ATADLFPRVSLSGFLGFTAGRGSQIGSNAARAWSVGPSISWAAFDLGSVRARLRGARADA 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++++ VL A++E NA + + ++ + L E + + + I YR+G Sbjct: 370 DAALASYEQQVLLALEESANAFSDYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTDF 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y ++G G+ P Sbjct: 430 LVLLDAEREQLSAEDAQAQAEVELYRGIVAIYRSLGGGWQP 470 >gi|148547556|ref|YP_001267658.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148511614|gb|ABQ78474.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 471 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 135/471 (28%), Positives = 233/471 (49%), Gaps = 26/471 (5%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWES 55 MN+L+ + SL + LA C VGP+Y P P Q +G+ D + WW+ Sbjct: 1 MNLLKPLTPSLLALALAACAVGPDYQAPATE--PAQ--LGSDVQAKAYDRSRFESLWWKQ 56 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS--ISHRFIPN 111 F+D LN+LV+ +L N + A R+ +A+ D FP +S AS + IP Sbjct: 57 FDDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPG 116 Query: 112 LKTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T LD W++DLFG+ +R IE+S A A A + ++++I++L+ +Y Sbjct: 117 QTTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAY 176 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + R IA L +++ ++ G + L +V+ +A + +E+ +P L+ Sbjct: 177 GQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQA 236 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H I+TLLG + S P + + +G P +L+R RPDIR E++ Sbjct: 237 EQARARHRIATLLGQRPDALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQ 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIK 341 LA + A +G+A +DL+P +SL+G + T S G + W+ GP + FD G ++ Sbjct: 294 LAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVR 353 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R A++ A+ +++ VL A++E NA + ++ ++ + L + +K+ L+ Sbjct: 354 ARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELAS 413 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YR+G L +LD ER E + + L + V +Y A+G G+ P Sbjct: 414 IRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQP 464 >gi|114328120|ref|YP_745277.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] gi|114316294|gb|ABI62354.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] Length = 521 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 128/485 (26%), Positives = 230/485 (47%), Gaps = 46/485 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHM-----PLLPTQFSIGN----SKNLINIDTLKWWESFNDT 59 +L ++ LAGC +GP + P P P S + WW SF D Sbjct: 18 TLIVLALAGCKIGPTFVPPRQDEAAKPWAPRAGHFEAQPIASHVVPEPTEASWWSSFTDP 77 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS--- 116 L L + NL + AT R+ ++ + RA LFPS + S++ + + S Sbjct: 78 VLTSLEQRVAANNLDVQTATVRLAESRAQLGGTRAALFPSLNGAASYQRLKPVSDRSLQV 137 Query: 117 -------------TGQ-------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQV 149 +GQ +D+ W+IDL+G+ RRHIE+ A + Sbjct: 138 GLGKAGLNGLLAESGQKIEVPPIDYFRYGIDASWEIDLWGRVRRHIEAGEAQIQQNQEAR 197 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 ++ ++++ Y+ R+ + I I + ++ ++N+ L+ + T G S L + Sbjct: 198 RATLVSAMAEVALDYMRLRNVQADIDIVRRNAEVARQNLNLARQRQTGGLGSDLDVQNAR 257 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A++ ES +P LE ++ +S LLG + + + +G+P+ Sbjct: 258 AQLALTESALPALETQQTALINALSLLLGQAPQALSGELIVPRPVPP--VPPRVPVGLPS 315 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTH-DNSFPGYNTHWS 325 DL+R RPD+R E L ++ A IG+A++ P + +N ++ ALT D G NT+ Sbjct: 316 DLVRRRPDVRQAEATLHEATANIGVAEASFLPRVIINANLMMSALTFADMGNWGSNTY-G 374 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP + LPIF+ G++K+N+ A +E I +++TVL A +V NA+ + ++++ Sbjct: 375 IGPMITLPIFEGGRLKANLDMATQQQKEAAIAYRKTVLQAFHDVSNAMAAYEDEQRRNEA 434 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L+ +V+ ++++ L+ YR G + LD+L+ ER E DL+ + ++ + V LY A Sbjct: 435 LRQSVDADRRAVGLAQNAYRNGLVTFLDVLNAERQLLAAERDLADSDAAISTNLVQLYKA 494 Query: 446 IGSGY 450 +G G+ Sbjct: 495 LGGGW 499 >gi|317484498|ref|ZP_07943407.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] gi|316924216|gb|EFV45393.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] Length = 458 Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 121/461 (26%), Positives = 226/461 (49%), Gaps = 25/461 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + L ++ LAGC+ P+Y +P M L G + L +WW+ F+D++LN LV+ Sbjct: 5 VVGLMMLGLAGCSFAPDYQRPQMELPQAWKDPGKGEQLDE----QWWKRFDDSTLNALVQ 60 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQ----- 119 AL N I A R++ A+ + RA+L P S A + ++ N K + Q Sbjct: 61 EALIANRDIAAAVARVDYARAQLGVARAELLPLLSGQAQGTQTWVDNTKITNGSQSPFSA 120 Query: 120 -LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++DL+G+ R+ E+++ + A +L++ ++ +Y R ++S A Sbjct: 121 GFGATWELDLWGKLRNAKEAAMYQVLGTEAAQRGMRLSIAAQTSNAYFLLRSLDLQLSTA 180 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + + + ++ QG S+L L + + E+++ ++ + S + LL Sbjct: 181 ERTVKTRTDALRIYTARYEQGLISELDLSRAKTEVETAKTALYQTRISRDAAESALEALL 240 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + + ++ + P I G+P+DL+ RPDI+ E + + A IG+AK Sbjct: 241 GRSPKDIMDGTVQRGMTLESIPTPPVIPAGVPSDLLERRPDIQQAEMSVKSANANIGVAK 300 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFGPKLYLPIFDKGKIKSNIRRAES 349 + +P++SL G + P +T WS+G +P+ D G++K + AE+ Sbjct: 301 AAWFPAISLTGLFGVVS----PELHTLMSNPLQTWSYGGAASVPLLDFGRVKYGVEAAEA 356 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E T+++TV A KE+ +ALT E +V L+ V+ + S+ L+ Y G Sbjct: 357 KQRESLATYEKTVQGAFKEMRDALTRQQEMSNVVASLERMVKELRLSVELANTRYDNGYS 416 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L++LD ER+ E+ L+ A+ + S V++ +A+G G+ Sbjct: 417 SYLEVLDAERSLFDSEMQLAAARSERLSSIVNVCLALGGGW 457 >gi|28870274|ref|NP_792893.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|301381179|ref|ZP_07229597.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302058554|ref|ZP_07250095.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302132592|ref|ZP_07258582.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28853521|gb|AAO56588.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 465 Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 134/450 (29%), Positives = 235/450 (52%), Gaps = 26/450 (5%) Query: 21 GPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 GP+Y P P + GN + ++TL WW+ F D +LNKLV +L N + A Sbjct: 22 GPDYKAPVTAPATLASAAKGN-YDRSKVNTL-WWQQFEDPTLNKLVAQSLDGNRDLRVAF 79 Query: 80 ERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKTNSTGQLDSDWKID 127 R+ AA+ V D+ P +S AS I+ R + N + G LD W++D Sbjct: 80 ARLKAARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSERYDLG-LDMAWELD 137 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA L +K Sbjct: 138 LFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNLTNQQK 197 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFL 245 + ++ G ++L +V+ +A + ++E+ +P L+ + I+TLLG P T + Sbjct: 198 SQGITTQLRDAGVGNELDVVRADARLAAVEATVPQLQAEQARQRNRIATLLGERPDTLSV 257 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S + P + + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL Sbjct: 258 DL----SPSKLPAIAKALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSL 313 Query: 306 NGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 +G + T S G + WS GP + FD G +++ IR A++ A+ +++ V Sbjct: 314 SGFLGYTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQV 373 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A++E ENA + ++ ++ + L + + + L+ + YR+G L +LD ER Sbjct: 374 LLALEESENAFSDYDKRQQRLVALMRQSDASRSAARLASVQYREGTADFLVLLDAERERL 433 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + A+ +L + V +Y A+G G+ P Sbjct: 434 AAEDSQAQAEIELYRGIVAIYKALGGGWQP 463 >gi|308186189|ref|YP_003930320.1| RND efflux system, outer membrane protein [Pantoea vagans C9-1] gi|308056699|gb|ADO08871.1| RND efflux system, outer membrane protein [Pantoea vagans C9-1] Length = 509 Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 130/469 (27%), Positives = 237/469 (50%), Gaps = 39/469 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLVKIALQQNL 73 C VGP+Y P P +P ++ +S+ T +WW SFND L+ L++ A+ NL Sbjct: 23 CAVGPDYQAPK-PAVPGSYNTLDSQEASKPQTAAINSRWWRSFNDPQLDSLIERAIAGNL 81 Query: 74 TILQATERINAAKENILSVRADLFPSSYASI--------------SHRFIPNLKTNSTGQ 119 ++ Q RI A+E + + LFPS S S+ L +N Q Sbjct: 82 SLQQTVLRIAGAREQLTQAQGSLFPSLSGSAKVTRQQLGLKGLLESNGATDQLDSNVASQ 141 Query: 120 L--------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L D+ W++DL+G+ RR +E++ A +A Q + A +++ +++ ++ Sbjct: 142 LNGLTQPVNLYQGSFDASWELDLWGKVRRQVEAANAQQQAAIEQRNDALVSLEAEVARAW 201 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R + I Q +++ ++ EL+ + G + A++ ++++ +P + Sbjct: 202 LQLRGAQSTIQTLQQQIEVAQQTTELTQSQQQNGLAPLTDVENARAQLSTLQAQLPQYQS 261 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R ++ ++ LLG T + + P L + +GIP+ L R RPDIR E Sbjct: 262 QARQAMNGLAVLLG--KTPGALDAELSTPKALPPLPQFVPVGIPSTLARRRPDIRQAEAT 319 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKLYLPIFDKGKIK 341 L A+IG++ + L+PSLSL G + + T + +++H +S+GP L +PIF G++ Sbjct: 320 LHAQTAEIGVSVAQLFPSLSLTGQLGVRNTDVSYLDNWSSHFYSYGPSLSIPIFQGGQLV 379 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S+++ A + + +++TVL A+++VENAL S D++ VT L +++ L+ Sbjct: 380 SSVKLARAQQASAALDYRQTVLTALQDVENALVSYRADQQRVTALDETTGALQRAFDLAS 439 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +YRQG + L++LD +R A+ + + A+ Q A V LY A+G G+ Sbjct: 440 DSYRQGLSTFLEVLDAQRQLAQAQEQATQARMQSALDLVALYKALGGGW 488 >gi|21230898|ref|NP_636815.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769103|ref|YP_243865.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|188992250|ref|YP_001904260.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. B100] gi|21112509|gb|AAM40739.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574435|gb|AAY49845.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734010|emb|CAP52216.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris] Length = 474 Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 116/421 (27%), Positives = 209/421 (49%), Gaps = 24/421 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC VGP+Y +P P T ++ WW F+D L +LV+ AL N + Sbjct: 16 SGCAVGPDY-RPEPPAAVTLQGAQDAAYSAESPVGNWWSQFDDPVLEQLVRDALFANHDL 74 Query: 76 LQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTNSTGQLDS 122 A R+ A+ + R D P A S RF L +T LD+ Sbjct: 75 RIAVSRVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQTTLGLDA 131 Query: 123 DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DLFG QRR E++ A+L++ A + ++ V +++ +Y + R ++++ ++ + L Sbjct: 132 AWELDLFGRQRRASEAARADLEAEQAGLQDVQVTVAAEVARNYFELRGTQKQLDVSKRTL 191 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + +L+ ++ GA S+L + A +K+IE+DIP LE + H I+ LLG Sbjct: 192 TNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRIAVLLGQQP 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + ++ P + +G A L+R RPD+R E++LA + A++G+A +DL+P Sbjct: 252 NALDATLVARTA---PPFARALPLGDTASLLRQRPDVRTAERRLAAATAQVGVATADLFP 308 Query: 302 SLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +S++G + ++ G WS P + FD G +++ +R +++ A+ + Sbjct: 309 RISVSGFVGFLSGDAARLTQGNAKAWSITPSISWAAFDFGTVRARLRASKAQAEGALAQY 368 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+TVL A+++ ENALT + + + +++ L+ I YR+G L +LD + Sbjct: 369 QQTVLLALEDTENALTGYGRQQARLAIVVDQANAARRAEQLAQIRYREGSEDFLTLLDAQ 428 Query: 419 R 419 R Sbjct: 429 R 429 >gi|50121856|ref|YP_051023.1| putative outer membrane efflux lipoprotein [Pectobacterium atrosepticum SCRI1043] gi|49612382|emb|CAG75832.1| putative outer membrane efflux lipoprotein [Pectobacterium atrosepticum SCRI1043] Length = 490 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 133/474 (28%), Positives = 234/474 (49%), Gaps = 41/474 (8%) Query: 14 LLAGCTVGPEYTKPHMPLL-------PTQFSI---GNSKNLINIDTLKWWESFNDTSLNK 63 ++AGC VGP+Y +P PL Q S GN+ NI WWESFND L++ Sbjct: 15 VMAGCAVGPDYHRPDAPLADRYQAQSAAQQSFAKQGNANQTANIAV--WWESFNDPLLSE 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 LV AL QNL + QA+ R+ A+ + + A L PS ++S + ++ T Q Sbjct: 73 LVSRALAQNLDLAQASARMTQARAGLGAATAALLPS--GNVSGQATRAYQSVETAQGRLL 130 Query: 120 ----------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L++ W+ID+FG RR +++LA+ ++ A V +L V ++ Sbjct: 131 NSVPGYNRYGNAYETDLNASWEIDVFGGLRRDRQAALADYQASEAGVTATRLAVAAQTAD 190 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 YI R + R+ IA++ ++ ++ +E L ++G ++ + + E + +++ +P L Sbjct: 191 IYIALRGLQTRLKIANRQVNTQQELLEKVQLLHSKGLAAEYQVRQTEGSLSQVQATVPVL 250 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + ++ + +LG P + + + QP I + G PADL+R RPDI E Sbjct: 251 QTGIDAAMNALDVMLGTPPGTYRNQLASSGPIPQPPQLI--STGTPADLLRRRPDIIVAE 308 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + LA S A+IG+A S+ YP SLN + +++ N F + + L +FD G Sbjct: 309 RHLAASNARIGVAISEYYPKFSLNALLGSATSVSSGNLFSNGASQSAGVLGLRWRLFDFG 368 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I + I +A+ E ++ +VL+A ++VENAL+++ + T L + Sbjct: 369 RINAQIDQAKGQEAEALAAYRLSVLSATEDVENALSALLNRETQTTTLTAGETALASARQ 428 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S I Y++G SL+D+L + + + A+ + A++ V + A+G G+ P Sbjct: 429 SSFIAYQKGTASLIDVLHNDETLLQTSDARAQAQTESARAAVATFRALGGGWQP 482 >gi|113971077|ref|YP_734870.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-4] gi|113885761|gb|ABI39813.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-4] Length = 517 Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 133/467 (28%), Positives = 233/467 (49%), Gaps = 28/467 (5%) Query: 3 ILRAIFSLFIVLLAGCTV-GPEYTKPHMPLLPTQ-------FSIGNSKNLINIDTLKWWE 54 + R + LL+GCTV GP+Y +P +P + T FS S + D +WW Sbjct: 7 VPRLVIGGACALLSGCTVLGPDYQQPEVPEIQTWQSASSQLFSAAPSAS----DYQQWWS 62 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 D L+ L+ AL +N + A RI A+ L + L + +++ +T Sbjct: 63 QLQDPVLSSLIDEALLKNPDVRIAGLRILEAQAQ-LGIAESLRNPQLTQATAQWLGAGQT 121 Query: 115 ---NST------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NST + W++D +G+ +R IES+ AN + AQ D ++ +I+++ Y Sbjct: 122 QSGNSTSGSSYGAAFNLGWELDFWGKFQRGIESADANYFATIAQYDDVQVLMIAQVAQLY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R + R+ IAH + K+++E++ +F G T++L + + + + S IPTLE Sbjct: 182 VTIRTLEARLQIAHDNAQIQKRSLEITQHQFHSGNTAELDVQQAKTQYLGTLSTIPTLET 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + R + + +STLL A L M + P + + +PADL+R RPD+R E++ Sbjct: 242 NLRHSQNALSTLLAR-APGPLPEMASNTGVI-PQGQLALVTEMPADLLRRRPDVRTAERQ 299 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSN 343 LA +IGIA+SDLYPS++L G++ L S G++ W GP + I D G++ + Sbjct: 300 LATQSGQIGIAESDLYPSITLAGTLGLNATGS--GHSIFSWGVGPSISWNILDSGRLTNQ 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I ++ ++ + ++ETV A +EV++A + +T L E +S+ ++ Sbjct: 358 ILVQDARFEQLHEVYRETVFKAAREVDDAAIAFANSATEITLLTQTGEAASRSLEIANTQ 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR+G +LD +RA + L ++ + + LY A+G G+ Sbjct: 418 YREGMADFQRVLDSQRALFSQQERLVNSRGAHIGNLITLYKALGGGW 464 >gi|299137787|ref|ZP_07030968.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298600428|gb|EFI56585.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 480 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 127/476 (26%), Positives = 235/476 (49%), Gaps = 41/476 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-----INIDTLKWWESF 56 +IL +FSL L GC+VGP Y +P + +LP QF+ ++ ++ + D ++W SF Sbjct: 6 SILATVFSLG---LTGCSVGPHYKQPTL-VLPQQFTAPDTASVDVSPHADADDPEFWHSF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL- 112 ND L+ LV+ +L N + A ++A + + D +P+ S S +F N Sbjct: 62 NDPELSSLVQRSLTANNDLRVALAHYDSANALLREAKFDRYPTVTMSTSVGRQKFGANQA 121 Query: 113 ----KTNS--TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + N T +++ W++D FG+ RH IE+ + + + ++ V+ ++ +YI Sbjct: 122 FGYPRNNRFFTPGINASWELDFFGRVRHNIEAQRQQTLADASNLAAMQVTVVGEVASTYI 181 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R +E + IA + ++ ++ + L ++ G ++ + A +++ S IP L + Sbjct: 182 DLRGRQELLRIARENVENEQETVRLVEAAYSAGRGTEFDTSRARALLETTTSRIPELLSA 241 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ H ++ L G + ++ P+L I++G PADL+R RPD+ E++L Sbjct: 242 IALDEHRLAVLCGLSPEALVSELEVAKP--LPDLPQRIDLGTPADLVRRRPDVSASEERL 299 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGY--------NTHWSFGPKLYLPI 334 + +IGIA +DL+P ++ G + L D F G N WSF Sbjct: 300 HAATEQIGIATADLFPRVNFAGLLGLNEFHGDTPFDGVSAVNLAALNIDWSF-------- 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 D+G++++ I + Q +Q++VL A+++VENAL S + +LQ A K Sbjct: 352 LDRGRVRARIAAKRADGDAQLAQYQQSVLLALEDVENALVSYARSQDRDVQLQLAANDSK 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ + ++ G LLD+LD +R + E + + A S V LY ++ G+ Sbjct: 412 RAADLASVRFKNGATGLLDLLDAQRVQLQAEDAYAESHSNSAISAVLLYKSLAGGW 467 >gi|330809923|ref|YP_004354385.1| outer membrane component of multidrug efflux system, OprN precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378031|gb|AEA69381.1| outer membrane component of multidrug efflux system, OprN precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 473 Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 232/471 (49%), Gaps = 23/471 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 M++ + SL ++ L+ C VGP+Y P + + N D + WW+ F Sbjct: 1 MSLKAFVPSLLVLALSACAVGPDYKAPQTEAANITTATDGAAGQKNFDRARFEGIWWQQF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNL 112 +D +LN LV +L+ N + A R+ AA+ D P+ + +++ IP Sbjct: 61 DDPTLNALVTRSLEGNRELRVAFARLRAARAIRDDASNDAMPTITSRASSNLGKGQIPGQ 120 Query: 113 KTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T+ LD W++DLFG+ +R++E++ AN + A + ++ +I++L+ +Y Sbjct: 121 TTDRVNTERYDLGLDMAWELDLFGRIQRNLEATDANQQAIEADLYQLQVTMIAELVDAYG 180 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + R IA L + + +++ G +L +V+ +A + S+E+ +P L+ Sbjct: 181 QLRGAQLREKIALANLKNQQDSRKITESLRDAGVGDQLDVVRADARLASVEASVPQLQAE 240 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + I+TLLG P + KQ P + + IG P +L++ RPDI E++ Sbjct: 241 QVRQRNRIATLLGERPDKLSVDLSPKQL----PAIAKALPIGDPGELLQRRPDILSAERQ 296 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIK 341 LA + A+IG+AK+DL+P +SL+G + T W+ GP + FD G ++ Sbjct: 297 LAAATARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVR 356 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R A++ A T+++ VL A++E ENA + + ++ + L E + + L+ Sbjct: 357 ARLRGADAEADGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAE 416 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YR+G L +LD +R E + A+ L + V +Y A+G G+ P Sbjct: 417 IRYREGTVDFLVLLDAQRERLAAEDTQAQAEVDLYRGIVAIYKALGGGWKP 467 >gi|149912533|ref|ZP_01901067.1| nodulation protein [Roseobacter sp. AzwK-3b] gi|149812939|gb|EDM72765.1| nodulation protein [Roseobacter sp. AzwK-3b] Length = 470 Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 131/448 (29%), Positives = 233/448 (52%), Gaps = 28/448 (6%) Query: 13 VLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 +LLAGC E H PL LP ++S+ + +WW +FND L++LV + Sbjct: 11 ILLAGCA---EIGMAHRPLEADLPDRYSVLAPVKAPTREDTEWWRNFNDPVLDQLVVRGM 67 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF 129 NL++ +A R+ A+ N A++ S A+ S R N+ + T + + +I+L Sbjct: 68 SDNLSVAEARARLREAEANARG--ANVPVSGNANASVRAPSNV--SETSEFSINGQINLA 123 Query: 130 GQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G+ ++ A L++A A+ V+S++ +Y D R F+ S A + DL + Sbjct: 124 GETGFRSRAAQARLEAAEFNTIEARRTVLSEVAQAYADLRFFQS--SRAFRARDLRSRQR 181 Query: 189 ELSHL--KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF-- 244 L+ + + GA ++L L++ ++ + ++IP L+ + +STLLG P Sbjct: 182 TLTDIETQLGAGAATRLDLLRAQSLLAETRAEIPQLDARIIQMRNRLSTLLGVPVGSLGI 241 Query: 245 -LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L Y +Q P I+ G+PADL+R RPDIR E+ A +V+ +G A + YPSL Sbjct: 242 DLGYRGQQ-----PMPKGTIDAGVPADLLRARPDIRRAEQLYAAAVSDVGAADAARYPSL 296 Query: 304 SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 +L+G I+ + G + + L +P+F++ + + A + ++ Y+ W+ VL Sbjct: 297 NLSGLISAPTN----GGSRTETLLAGLVMPVFNQPALLAEKDAAAARVEQTYLQWRIAVL 352 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM-INYRQGRYSLLDILDIERATA 422 +A++EVENA T + +K V + AV L+++++ LS + G ++LD+LD ERA + Sbjct: 353 DAVEEVENAQTLLTSARKSVAAAREAVTLNRQALDLSRELLSSGGNITVLDVLDRERALS 412 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ R +A +++ LY+A+G G+ Sbjct: 413 SSRTALAQNTRDVASAFIQLYVALGRGH 440 >gi|325914021|ref|ZP_08176377.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] gi|325539790|gb|EGD11430.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] Length = 470 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 116/421 (27%), Positives = 207/421 (49%), Gaps = 24/421 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC VGP+Y +P P T ++ WW F+D L +LV+ AL N + Sbjct: 12 SGCAVGPDY-RPDPPASVTLQGAQDASFSAESPVGNWWSQFDDPVLEQLVRDALFANHDL 70 Query: 76 LQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTNSTGQLDS 122 A R+ A+ + R D P A S RF L +T LD+ Sbjct: 71 RIAVSRVKQARAVFVERRLDQAPHITAQSSFDRREQQQVIAGNQRF---LTEQTTLGLDA 127 Query: 123 DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DLFG QRR E++ A+LD+ A + ++ V +++ +Y + R ++++ ++ + L Sbjct: 128 AWELDLFGRQRRASEAARADLDAEQANLQDVQVTVAAEVARNYFELRGTQKQLDVSKRTL 187 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ LLG Sbjct: 188 TNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEADIPLLETAEAQYRHRLAVLLGQQP 247 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + +S P P+ +G A L+R RPD+R E++LA + A++G+A +DL+P Sbjct: 248 NALDATLVARS---MPAFARPLPLGDTAGLLRQRPDVRSAERRLAAATAQVGVAMADLFP 304 Query: 302 SLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +S++G + ++ G WS P + FD G +++ +R +++ A + Sbjct: 305 RISVSGFVGFLSGDAARLTQGNAKAWSITPSISWAAFDFGTVRARLRASKAQADGALAQY 364 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+ VL A+++ ENAL + + + +++ L+ I YR+G L +LD + Sbjct: 365 QQAVLLALEDTENALIGYGRQQARLAIVVDQANAARRAEQLAQIRYREGSEDFLTLLDAQ 424 Query: 419 R 419 R Sbjct: 425 R 425 >gi|330965812|gb|EGH66072.1| outer membrane efflux protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 465 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 132/450 (29%), Positives = 235/450 (52%), Gaps = 26/450 (5%) Query: 21 GPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 GP+Y P P + GN + ++TL WW+ F+D +LNKLV +L N + A Sbjct: 22 GPDYKAPVTAPATLASAAKGN-YDRSKVNTL-WWQQFDDPTLNKLVAQSLDGNRDLRVAF 79 Query: 80 ERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKTNSTGQLDSDWKID 127 R+ A + V D+ P +S AS ++ R + N + G LD W++D Sbjct: 80 ARLKAVRAIRDDVANDIMPVVTSRASSDLGKGQQPGVTERRV-NSERYDLG-LDMAWELD 137 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA L +K Sbjct: 138 LFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNLTNQQK 197 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFL 245 + ++ G ++L +V+ +A + ++E+ +P L+ + I+TLLG P T + Sbjct: 198 SQGITTQLRDAGVGNELDVVRADARLAAVEATVPQLQAEQARQRNRIATLLGERPDTLSV 257 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S + P + + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL Sbjct: 258 DL----SPSKLPAIAKALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSL 313 Query: 306 NGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 +G + T S G + WS GP + FD G +++ IR A++ A+ +++ V Sbjct: 314 SGFLGYTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQV 373 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A++E ENA + ++ ++ + L + + + L+ + YR+G L +LD ER Sbjct: 374 LLALEESENAFSDYDKRQQRLVALMRQSDASRSAARLASVQYREGTADFLVLLDAERERL 433 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + A+ +L + V +Y A+G G+ P Sbjct: 434 AAEDSQAQAQIELYRGIVAIYKALGGGWQP 463 >gi|78222875|ref|YP_384622.1| RND efflux system, outer membrane lipoprotein, NodT [Geobacter metallireducens GS-15] gi|78194130|gb|ABB31897.1| RND efflux system, outer membrane lipoprotein, NodT [Geobacter metallireducens GS-15] Length = 546 Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 234/492 (47%), Gaps = 56/492 (11%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLIN-IDTLKWWESFNDTS 60 +L A+F +L+GC VGP++ +P + + G ++ D WW FND Sbjct: 18 VLAAVF-----ILSGCIKVGPDFHRPDVAVPSDWTEAGENQGETGPADYRSWWRVFNDPI 72 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG 118 L++L+ +A ++NLT+ A R+ A+ + V + FP + H + + TG Sbjct: 73 LDRLIDLAYRENLTLRIAGARVLEARALLGIVVGEYFPQTQQGFGSVHYNRTSRGSVQTG 132 Query: 119 Q--------------------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 L + W++D +G+ RR IES+ A+ ++ A D Sbjct: 133 TQQSSASQSSASLGGGSGLSFWQSQIGLTASWELDFWGKYRRAIESADASWLASVADYDN 192 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A + + + + SYI R + R+ IA + ++N+ ++ +F G ++L L + E Sbjct: 193 ALVALTADVANSYITIRTLETRLDIARRNTQTQRENLNIAEARFKYGTATQLDLDQAETS 252 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IG 266 + + + P+LE R H +S LLG + Y+ + IP++ G Sbjct: 253 LNTTLATTPSLEAQLRQTKHGLSVLLGMAPGDLSGYLNGPAT-------IPVSPPQVVFG 305 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNT--H 323 IPADL+R RPDIR E + A A+IG+AK+DLYP+ SL+G+ L+ D + + Sbjct: 306 IPADLLRRRPDIRAAEHRAAAQSAQIGVAKADLYPAFSLSGTFGFLSTDIGGASLSDMFN 365 Query: 324 WS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 WS GP I + G+I +N+R ++ QE IT+Q VL A +EVE+ L + Sbjct: 366 WSSRFIQAGPSFQWNILNYGRISNNVRLQDARLQELLITYQNMVLTAQQEVEDNLVAFLR 425 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + L + +S++L+++ Y+QG +L +++ + L+ +A S Sbjct: 426 ARDRAEFLARSTAAAARSLNLAVLQYQQGIKDFTTVLIAQQSLLNEQDSLATTMGSIASS 485 Query: 439 YVDLYIAIGSGY 450 V +Y A+G G+ Sbjct: 486 LVGVYRALGGGW 497 >gi|206890101|ref|YP_002249206.1| RND efflux system, outer membrane lipoprotein, NodT [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742039|gb|ACI21096.1| RND efflux system, outer membrane lipoprotein, NodT [Thermodesulfovibrio yellowstonii DSM 11347] Length = 434 Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 127/422 (30%), Positives = 223/422 (52%), Gaps = 18/422 (4%) Query: 45 INIDT---LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-- 99 IN DT KWWESFND +L++L++IA++ NL + QA RI AK A LFPS Sbjct: 6 INNDTENLAKWWESFNDKTLSQLIEIAIKNNLDLKQAQARIKEAKARREVAGAKLFPSID 65 Query: 100 --SYASISHRFIPNLKTNSTGQL-----DSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 S AS S ++ N+ L D+ W+ D+FG +R+ +E+ A +++ Sbjct: 66 AKSSASYSKTRGTKIEDNTVEHLYSAGIDASWEADIFGGKRKSLEAYQAEFEASQWDFKA 125 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 +++IS++ +YI+ + ++ RI IA + L+ + L+ K+ G + + + E Sbjct: 126 TIVSLISEVALNYIELKTYQNRIEIAEKNLNSQTETYNLTKWKYMAGLNDAIDVTQAEYS 185 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +++ + +P+L + ++ I+ LLG + ++K ++ +P + I++ IPAD+ Sbjct: 186 MENTRAQLPSLRTAIEEKINTIAVLLGKQPQQISEELKK--SHTKPLISEKISLRIPADV 243 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSFGPK 329 ++ RPDIR E++LA A++ A + YP +L+GS + NS T G Sbjct: 244 LKMRPDIRKAERQLAAQSARVDEAIAGFYPKFTLSGSFGIEALSLNSLVKAATKIITGDF 303 Query: 330 LY-LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIF +I+ N+ + ++ + ++ TVLNAIKEVENAL + E++K L+ Sbjct: 304 LISLPIFHADEIRQNVEIQTALQEQALLNYEATVLNAIKEVENALVAYAEEQKRKQALEK 363 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 AVE + S +L++ Y G +L+ +R+ ++ L +K + + LY A G Sbjct: 364 AVEASQLSFALALQKYEVGLTDFSTVLETQRSLLNLQDQLEQSKGNIFIYLIKLYKAFGG 423 Query: 449 GY 450 G+ Sbjct: 424 GW 425 >gi|330503451|ref|YP_004380320.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] gi|328917737|gb|AEB58568.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] Length = 462 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 125/459 (27%), Positives = 228/459 (49%), Gaps = 20/459 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-TLKWWESFNDTSLNKLVKI 67 +L + L+ C VGP+Y P P + + + + WW+ F+D +LN+LV+ Sbjct: 7 ALLTLALSACAVGPDYRAPATD--PARIAALEAADYDRSRFEAAWWQQFDDPTLNQLVQR 64 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-------- 119 +LQ N + A R+ AA+ V D P+ + S F + +T + Sbjct: 65 SLQDNRELRVAFNRLRAARAIRDDVANDRLPTVTSRASGEFGKAQQPPTTDERVRQERYD 124 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 LD W++DLFG+ +R +E+S A ++ A A ++++I++L+ +Y R + R SI Sbjct: 125 LGLDMAWEVDLFGRIQRQLEASEARIEVAEADYYQLQVSLIAELVDAYGTLRGAQLRESI 184 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + + ++ G ++L +++ +A + + E+ +P L+ + I+TL Sbjct: 185 ARENLKNQQDSRAITEQLRDAGVGTELDVLRADARLAATEASLPQLQAQQVRAQNRIATL 244 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + + + P + + IG PA+L+R RPDI+ E++LA + A +G+A Sbjct: 245 LGQRPEQLQVDLAPRP---LPVIAKALPIGNPAELLRRRPDIQAAERQLAAATADVGVAT 301 Query: 297 SDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +DL+P +SL+G + T S G + W P + FD G +++ +R AE+ A Sbjct: 302 ADLFPRVSLSGFLGFTAGRGSQLGASAARAWGVAPSISWAAFDLGSVRARLRGAEAQADG 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ VL A++E ENA + + ++ + L E + + + I YR+G L Sbjct: 362 ALAQYEQQVLLALEESENAFSDYAKRQQRLVSLVRQAEASRAAADQAAIRYREGTVDFLV 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LD ER E + A+ +L V +Y A+G G+ P Sbjct: 422 LLDAERERLAAEDAQASAETELYSGIVAIYKALGGGWQP 460 >gi|253689056|ref|YP_003018246.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755634|gb|ACT13710.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 490 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 132/474 (27%), Positives = 235/474 (49%), Gaps = 43/474 (9%) Query: 15 LAGCTVGPEYTKPHMPLL---PTQFSI-------GNSKNLINIDTLKWWESFNDTSLNKL 64 +AGC VGP+Y +P PL TQ +I GN N+ WWESFND L++L Sbjct: 16 IAGCAVGPDYHRPDAPLADRYQTQSAIKSSLAEQGNVTQAANLAV--WWESFNDPLLSEL 73 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----- 119 V AL QNL + QA+ R++ A+ + + L PS +IS + ++ T Q Sbjct: 74 VSRALTQNLDLAQASARMSQARAGLGTATTALLPSG--NISGQAARAYQSVETAQGQLLN 131 Query: 120 ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L++ W+ID+FG RR +++LA+ ++ A V +L + ++ + Sbjct: 132 AVPGYNRYGNAYETDLNASWEIDVFGGLRRDRQAALADYQASEAGVTATRLAIAAQTADT 191 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + R++IA+ ++ ++ ++ ++G ++ + + E + +++ +P ++ Sbjct: 192 YITLRGLQTRLAIANMQVNTQQELLDKVQRLHSKGLAAEYQVRQTEGALSQVQATVPAIQ 251 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + +LG P H +Q ++ P I G PADL+R RPDI E+ Sbjct: 252 TGIDAAMNALDVILGTP--PGTHQVQLSASGDIPQPPSLIATGTPADLLRRRPDIIVAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 LA S A+IG+A S+ YP SLN + +++ N F + + L +FD G+ Sbjct: 310 HLAASNARIGVAISEYYPKFSLNALLGSATSVSSGNLFSSGASQSAGVLGLRWRLFDFGR 369 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKKSMS 398 I + I RA+ E ++ +VL A ++VENAL++ +N + + T L S Sbjct: 370 INAQIDRAKGQEAEALAAYRLSVLRATEDVENALSAVVNREAQSATLTAGETALTSARQS 429 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S I Y++G SL+D+L + + + A+ + A++ + + A+G G+ P Sbjct: 430 -SFIAYQKGTASLIDVLHADETLLQASDARAQAQTEAARAAIAAFKALGGGWQP 482 >gi|304397008|ref|ZP_07378887.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] gi|304355157|gb|EFM19525.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] Length = 509 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 127/469 (27%), Positives = 238/469 (50%), Gaps = 39/469 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLVKIALQQNL 73 C VGP+Y P P +P ++ +S+ +WW SFND L+ L++ A+ NL Sbjct: 23 CAVGPDYQAPK-PAVPGSYNTLDSQEASKPQNAAINSRWWRSFNDPQLDSLIERAIAGNL 81 Query: 74 TILQATERINAAKENILSVRADLFPSSYASI--------------SHRFIPNLKTNSTGQ 119 ++ Q RI A+E + + LFPS S S+ L +N Q Sbjct: 82 SLQQTVLRIAGAREQLTQAQGSLFPSLSGSAKVTRQQLGLKGLLESNGATDQLDSNVASQ 141 Query: 120 L--------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L D+ W++DL+G+ RR +E++ A +A Q + A +++ +++ ++ Sbjct: 142 LNGLTQPVNLYQGSFDASWELDLWGKVRRQVEAANAQQQAAIEQRNDALVSLEAEVARAW 201 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R + + + +++ ++ EL+ + G + A++ ++++ +P + Sbjct: 202 LQLRGAQSTVQTLQEQINVAQQTTELTQSQQRNGLAPLTDVENARAQLSTLQAQLPQYQS 261 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R ++ ++ LLG T + + P L + +GIP+ L R RPDIR E Sbjct: 262 QARQAMNGLAVLLG--KTPGALDAELSTPKALPPLPQFVPVGIPSTLARRRPDIRQAEAT 319 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKLYLPIFDKGKIK 341 L A+IG++ + L+PSLSL G + + + ++ +++H +S+GP L +PIF G++ Sbjct: 320 LHAQTAEIGVSVAQLFPSLSLTGQLGVRNTDASYLDNWSSHFYSYGPSLSIPIFQGGQLV 379 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S+++ A + + +++TVL A+++VENAL S D++ VT L +++ +L+ Sbjct: 380 SSVKLARAQQASAALDYRQTVLTALQDVENALVSYRADQQRVTALDETTGALQRAFNLAS 439 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +YRQG + LD+LD +R A+ + + A+ Q A V LY A+G G+ Sbjct: 440 DSYRQGLSTFLDVLDAQRQLAQAQEQATQARMQSALDLVALYKALGGGW 488 >gi|91203027|emb|CAJ72666.1| similar to multicomponent efflux pump (outer membrane subunit, RND family of ABC transporters) [Candidatus Kuenenia stuttgartiensis] Length = 493 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 234/466 (50%), Gaps = 31/466 (6%) Query: 10 LFIVLLAGCT-VGPEYTKPHMP---LLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKL 64 L LLA CT VGP+Y KP Q G ++ ++ +TL +WW+S D L+ Sbjct: 27 LLFTLLASCTTVGPDYKKPDRASPEAWVGQLEGGLTQQQLDPETLSQWWKSLGDPVLSGF 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNSTGQL- 120 V+ A+ NL + A ++ A+ + + FP+ A +I N ST +L Sbjct: 87 VERAIAANLDLRTAEAQLCQARAQRGIIGSTRFPTIDAEGFAIRTGSSENTGAGSTSELY 146 Query: 121 ----DSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 D+ W++D+FG R R +E++ A+ +A ++V++++ +YI+ R F+ + + Sbjct: 147 SSSFDAAWELDIFGGRHRALEAAEADFQAAQEARRDVLVSVLAEVAVNYIELRTFQAQYA 206 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + +E+ +F GA +L L + + ++ S++P L ++ + ++ Sbjct: 207 VAKQNLLVQLDTLEIVQAQFDAGAVLELDLERAVSNAETTRSELPRLNQAITQAKNRLAV 266 Query: 236 LLGY-PAT-----EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 L+G P T + L M S + I +G+PA+ +R RPD+R E++LA Sbjct: 267 LIGQTPGTVDKELDGLRLMSTPS--------VQIAVGVPAETLRRRPDVRRAERQLAAET 318 Query: 290 AKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A + LYP +L G+I L + N + W GP + IFD G+ + I Sbjct: 319 ARIGVATAVLYPKFTLAGTIGLESLSPSNLIASDSRTWGIGPSVQWNIFDGGRTRQKIAV 378 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + ++ + ++ ++LNA++EVENA+T+ +++ L + +++ +++ Y Sbjct: 379 QNALQEQAMVQYEASILNALEEVENAITAFTQEQLRYRSLVESAAAAERAANIAQTRYEA 438 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G + L +LD +R + + ++ + + V LY ++G G+ P Sbjct: 439 GASNFLTVLDTQRTLLSTQNRQAASQGAIMSNLVRLYKSLGGGWTP 484 >gi|300716019|ref|YP_003740822.1| RND efflux system, outer membrane lipoprotein, NodT [Erwinia billingiae Eb661] gi|299061855|emb|CAX58971.1| RND efflux system, outer membrane lipoprotein, NodT [Erwinia billingiae Eb661] Length = 517 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 135/497 (27%), Positives = 239/497 (48%), Gaps = 52/497 (10%) Query: 1 MNI----LRAIFSLFIVLLA--GCTVGPEYTKPHMPLLPTQF-SIGN---SKNLINIDTL 50 MN+ LR+ S + LA C+VGP+Y P P P F SI N S + Sbjct: 1 MNVYLPFLRSRLSAVVATLALSACSVGPDYQAPK-PSTPAAFNSIKNDSGSNPQASATNA 59 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--- 107 WW+SFND L+ L+ A+ NL++ QA RI A++ + R +PS A+ S + Sbjct: 60 NWWKSFNDPQLDSLIDRAIAGNLSLQQAVLRIAGARQQLNQARGAWYPSVNANASAKREQ 119 Query: 108 --FIPNLKTNST--------------------------GQLDSDWKIDLFGQ-RRHIESS 138 L++N G D+ W++DL+G+ RR +E + Sbjct: 120 LGLKGELESNGVYDQADNVDPQVSSALNGLTKPVALYQGSFDASWELDLWGKVRRQVEMA 179 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A + + A +++ +++ +Y+ R + +D+ ++ EL+ + G Sbjct: 180 DAQQQESVESRNDALVSLEAEVARTYLQLRGAQSVSQTLQTQIDVAQQTFELTQSQQRNG 239 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 ++ + A++ S+ + +P E ++ ++ L+G P + ++ P Sbjct: 240 LAPQMDVENARAQLNSLRAQLPQYESQVHQALNGLAVLIGKPPGALDAELI--ASKPLPP 297 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 L + +G+P+ L R RPD+R E KL + A IG++ + L+P LSL G + NS Sbjct: 298 LPKVVPVGLPSTLARRRPDVRQAEAKLHAATANIGVSVAQLFPDLSLTGQFGMR--NSDI 355 Query: 319 GYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 Y +WS FGP + +PIF G++ S+++ A + + +++TVL A+++VENAL Sbjct: 356 SYLDNWSSNFYSFGPSVSIPIFQGGRLISSVKLARADQASAALGYRQTVLTALQDVENAL 415 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 S D++ V L VE + + L+ +Y+QG + +D LD +R A+ + + A+ Sbjct: 416 VSYRTDQQQVEGLDRTVEAMQNAFDLASDSYKQGLSTFIDALDAQRQLAQAKQQAAQARV 475 Query: 434 QLAKSYVDLYIAIGSGY 450 Q + V LY A+G G+ Sbjct: 476 QSSLDLVALYKALGGGW 492 >gi|301058955|ref|ZP_07199924.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] gi|300446951|gb|EFK10747.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] Length = 468 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 121/434 (27%), Positives = 218/434 (50%), Gaps = 32/434 (7%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASIS 105 D WW FND LN LV+ AL QNLT+ A RI A+ + L+P + + Sbjct: 10 DVTNWWTVFNDPVLNSLVEKALNQNLTLQVAGLRIFEARAELGFTTGLLYPQQQRLQAGA 69 Query: 106 HRFIPNLKTNSTGQLDSD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 R + +T LD+D W++D +G+ RR +E++ A+L ++ A D A Sbjct: 70 SRVKSSKNAANTMLLDTDYVDYDVGFDAAWELDFWGRYRRAVEAADASLHASIADYDNAM 129 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + +++++ +Y+ R F++RI++A + + ++++E++ +F G ++L + + A +K Sbjct: 130 VTLVAEVARTYVLIRTFEKRIALARENTGIQQRSLEIAQRRFKGGIVTELDVQQATALLK 189 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + ++ +P K+ + H +S LLG P E + P + + +G+PA+L+R Sbjct: 190 NTQALVPRFTKNLQEAKHALSVLLGLPPGELPESLVDSRK--VPMVLPQVVVGVPAELLR 247 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-------THDNSFPGYNTHWSF 326 RPDIR E A IG+AK+DLYP L GSI L T G N F Sbjct: 248 RRPDIRRAEMMAAAQCDLIGVAKADLYPHFILIGSIGLRTSTSLFTKAGGIDGSNFSDLF 307 Query: 327 ---------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 GP + IF+ G++K+ +R ++ Q+ + +Q TVLNA +EVE+A+ Sbjct: 308 SSDSFQLFAGPSIRWDIFNYGRLKNKVRVQDARFQQLIVQYQNTVLNAAREVEDAIVGFL 367 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + L+ V+ K+++ +S++ YR+G +L + + + + +A Sbjct: 368 RSQDENAFLKSGVQASKRAVDISLLQYREGLVDYQRVLSAQSFLTQQQDQQTSTSSLVAL 427 Query: 438 SYVDLYIAIGSGYN 451 + + LY A+G G++ Sbjct: 428 NLISLYKALGGGWD 441 >gi|148549654|ref|YP_001269756.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148513712|gb|ABQ80572.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 484 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 126/463 (27%), Positives = 236/463 (50%), Gaps = 35/463 (7%) Query: 17 GCTVGPEYTKP--HMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GCT+GP++ +P P P Q S+ L+WWE+F+D L+ L++ ++N Sbjct: 18 GCTLGPDFLRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALIQRVAERN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS-------SYASISHRFI--PNLKTNS------T 117 L + A+ R+ ++ ++ AD PS S A S + P+ K Sbjct: 78 LDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKAGKEAFNLWQ 137 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + W++DL+G+ RR +E++ A ++ A L ++S+ +YI R + + + Sbjct: 138 GDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRAVQHTLDV 197 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L + + +++LS + +G ++L + + A++ SIE+ +P+LE + R ++ N +L Sbjct: 198 TQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIEARLPSLE-ARRDDLINALSL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-----INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L A E +Q + P +P IG+P++L RPDIR E +L + A Sbjct: 257 L---AAEPPRSLQAE---LLPGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAATAS 310 Query: 292 IGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+D YPS+ L+GS+ + F G+++ ++FGP++ LPIF+ G++K + E Sbjct: 311 IGVAKADFYPSIRLSGSVGFQAMQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELRE 370 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + QE + +++ VL A E+++ L N + L AV ++ ++ + Y +G Sbjct: 371 AQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGA 430 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L ++ A E + ++++ V LY A+G G+ Sbjct: 431 VDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473 >gi|325922880|ref|ZP_08184600.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325546634|gb|EGD17768.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 474 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 115/428 (26%), Positives = 211/428 (49%), Gaps = 24/428 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++L+GC VGP+Y +P P T ++ WW F+D L +LV+ Sbjct: 9 ALAALVLSGCAVGPDY-RPDPPAAVTLQGAQDAAYSAESPVGNWWSQFDDPVLEQLVRDG 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTN 115 L N + A R+ A+ + R D P A S RF L Sbjct: 68 LFANHDLRIAVSRVKQARAVFVERRLDQAPHITAQGSFDRREQQQVIAGNQRF---LTEQ 124 Query: 116 STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T LD+ W++DLFG QRR E++ A+L++ A + ++ V +++ +Y + R ++++ Sbjct: 125 TTLGLDAAWELDLFGRQRRASEAARADLEAEQAGLLDVQVTVAAEIARNYFELRGTQKQL 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L +L+ ++ GA S+L + A +K+IE+DIP LE + H ++ Sbjct: 185 DVSKRTLTNLHDTQKLTQTRWDLGAGSELEVQSSLARLKAIEADIPLLETAEAQYRHRLA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + ++ P + +G A L+R RPD+R E++LA + A++G+ Sbjct: 245 VLLGQAPDALDATLVPRTT---PAFARALPLGDTAGLLRQRPDVRSAERRLAAATAQVGV 301 Query: 295 AKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +S++G + ++ G WS P + FD G +++ +R +++ A Sbjct: 302 ATADLFPRISVSGFVGFLSGDAARLTEGSGKAWSITPSISWAAFDFGTVRARLRASKAQA 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +Q+ VL A+++ ENALT + + + +++ L+ I YR+G Sbjct: 362 EGALAQYQQAVLLALEDTENALTGYGRQQARLAIVVEQANAARRAEQLAQIRYREGSEDF 421 Query: 412 LDILDIER 419 L +LD +R Sbjct: 422 LTLLDAQR 429 >gi|328954054|ref|YP_004371388.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] gi|328454378|gb|AEB10207.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] Length = 477 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/471 (24%), Positives = 234/471 (49%), Gaps = 33/471 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLKWWESFNDTSL 61 + L +L+ GCT+GP+Y +P P+ PT G ++ LKW+E F D L Sbjct: 4 CLIMLLFMLVCGCTLGPDYQRPGYPVPPTFRGAGPDLSKQPAEVSFGDLKWFEVFKDQKL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL- 120 +L+ IALQ+N + A +R+ AA+E + R+ LFP+ ++ + +L+T+ G Sbjct: 64 QELIHIALQENYDVQIAAQRVMAAREQVTIQRSYLFPTLN---TNGQLESLRTSERGFSV 120 Query: 121 --------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 D W++D FG+ RR E++ A ++ +++ L +YI Sbjct: 121 LAPQQERMAGLIFGDLSWELDFFGRIRRATEAARAEFYASEENRKFVIQTLVTDLARAYI 180 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R +++ I+++ + + +++++L +F G S+ ++ E + + +P L+++ Sbjct: 181 ELRALDQQLDISNRTVKVREESLKLVKARFDYGWDSQTPVLMTENLVYGARAVVPDLQRA 240 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + I+TLLG P + + + L + I G+ + L+ RPD+R+ E+ Sbjct: 241 IEQQENRITTLLGRNPGP-----VSRGKPLLKQKLSVTIPPGMTSALLERRPDVRFAEES 295 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDKGKI 340 L + A+IG AK+ L+P++ + G ++ H SF P + PIF+ G++ Sbjct: 296 LVAANARIGEAKALLFPNIRITGVAGWESAALKSLFSAHASFWDVISPGITQPIFNAGRL 355 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++N+R E+ QE + +++++ A +EV +AL + +++ + + V+ K L+ Sbjct: 356 RANVRATEALQQEALLNYKKSIQQAFREVSDALVGVRRLREVRLEAEKQVQALTKQTDLA 415 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G L++LD +R + E+ L+ + + + LY A+G G+ Sbjct: 416 NQRYFGGVTPYLEVLDSDRQLFEAELRLTQVQANELLAVIALYRALGGGWQ 466 >gi|330809913|ref|YP_004354375.1| outer membrane component of multidrug efflux system [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378021|gb|AEA69371.1| putative outer membrane component of multidrug efflux system [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 486 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 137/471 (29%), Positives = 235/471 (49%), Gaps = 40/471 (8%) Query: 14 LLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L+ GCTVGP+Y +P H L Q S+ + + WWE F D L+ L+ A Sbjct: 15 LMTGCTVGPDYQRPDAAPGHRYL--GQASVEQRSAATSASLVAWWEGFADPVLSDLIAQA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ 119 L+QNL + QA+ R+ A+ + + A L PS SY S+ L NST Sbjct: 73 LEQNLDLAQASARVTQARAGLGAANAALLPSGNINGQAARSYQSVETPLGQVL--NSTPG 130 Query: 120 LD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 D + W+IDLFG RR E++LA ++ A V +L V ++ YI A Sbjct: 131 YDRYGNAYELNVGASWEIDLFGGLRRGREAALAQYQASEAGVAATRLVVAAQTADLYITA 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R+ IA+Q + + +E L +++G + + ++E + +++ +P L+ Sbjct: 191 RGLQARLDIANQQVKTQQDLLEKVQLLYSKGLAANYQVHQVEGALSQVQATVPVLQTGLD 250 Query: 228 MNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + +LG P T + +S P + +G PADL+R RPD+ E++LA Sbjct: 251 AAMNALDVMLGTPPGTHRTQLVNGRSIPLAPQI---TAMGTPADLLRRRPDLIVAERRLA 307 Query: 287 DSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 S A+IG A ++ YP SL+ + A++ N F G ++ + L +FD G+I + Sbjct: 308 ASNARIGEAVAEYYPKFSLSALLGSATAVSGGNLFTGDSSQAAGALGLRWRLFDFGRINA 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKKSMSLSM 401 I +A+ E ++++VL A ++VENA ++ +N + + T Q L + S S Sbjct: 368 QIDQAKGQEAEALAAYRQSVLRATEDVENAFSALVNRESQASTLTQGETSLTQARQS-SF 426 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I Y++G SL+D+L+ + +V + A+ + A++ V + A+G G+ P Sbjct: 427 IAYQKGTASLIDVLNADATLLQVSDARAQARMESARAAVAAFRALGGGWQP 477 >gi|46578479|ref|YP_009287.1| RND efflux system outer membrane lipoprotein [Desulfovibrio vulgaris str. Hildenborough] gi|46447890|gb|AAS94546.1| RND efflux system, outer membrane protein, NodT family [Desulfovibrio vulgaris str. Hildenborough] gi|311232407|gb|ADP85261.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris RCH1] Length = 504 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 30/464 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L LL+GC +GP+Y +P M L P+ + S + + KWW F D +L+ L + AL Sbjct: 10 LGAALLSGCAIGPDYQRPGMDL-PSAWR-AESADAGMVAGEKWWTLFGDATLDALEEEAL 67 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI-----PNLKTNSTGQLD 121 N + A ++A++ + + L PS +S+ R P ++ L Sbjct: 68 AANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGSERGQNPPVEGREVTDLH 127 Query: 122 -----SDWKIDLFGQ-RRHIESSLANL---DSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +++DL+G+ RR E++ A L ++AYA V +L V+S++ SY R Sbjct: 128 KASALASFELDLWGKYRRAHEAARAGLLGTEAAYATV---RLAVVSQVAQSYFGLRAADR 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IA Q L ++++++ +F G TS+L + +AE S + + LE++ Sbjct: 185 QLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAAAETA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S+LLG + + ++ + + P I G+PA L+ RPD+ E L + A Sbjct: 245 LSSLLGRSPRDIVERSPERGLDIETFAVPPQIPAGLPAGLLARRPDVARAEADLHYATAS 304 Query: 292 IGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+AK+DL P++SL G SI LT S + WS+G +P+ D G+ +NI Sbjct: 305 IGVAKADLLPAISLTGLMGYESIDLTRLVS--SSSGTWSYGASATMPLLDFGRTLANIDM 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ + +++ V +A +E ++AL + + +++V V ++S++L+ + Y Sbjct: 363 ADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERSLTLARLRYEN 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L++LD ER+ + +++L A+R + V + ++G G+ Sbjct: 423 GYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGGW 466 >gi|120603937|ref|YP_968337.1| RND efflux system outer membrane lipoprotein [Desulfovibrio vulgaris DP4] gi|120564166|gb|ABM29910.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris DP4] Length = 504 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 30/464 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L LL+GC +GP+Y +P M L P+ + S + + KWW F D +L+ L + AL Sbjct: 10 LGAALLSGCAIGPDYQRPDMDL-PSAWR-AESADAGMVAGEKWWTLFGDATLDALEEEAL 67 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI-----PNLKTNSTGQLD 121 N + A ++A++ + + L PS +S+ R P ++ L Sbjct: 68 AANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGSERGQNPPVEGREVTDLH 127 Query: 122 -----SDWKIDLFGQ-RRHIESSLANL---DSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +++DL+G+ RR E++ A L ++AYA V +L V+S++ SY R Sbjct: 128 KASALASFELDLWGKYRRAHEAARAGLLGTEAAYATV---RLAVVSQVAQSYFGLRAADR 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IA Q L ++++++ +F G TS+L + +AE S + + LE++ Sbjct: 185 QLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAAAETA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S+LLG + + ++ + + P I G+PA L+ RPD+ E L + A Sbjct: 245 LSSLLGRSPRDIVERSPERGLDIETFAVPPQIPAGLPAGLLARRPDVARAEADLHYATAS 304 Query: 292 IGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+AK+DL P++SL G SI LT S + WS+G +P+ D G+ +NI Sbjct: 305 IGVAKADLLPAISLTGLMGYESIDLTRLVS--SSSGTWSYGASATMPLLDFGRTLANIDM 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ + +++ V +A +E ++AL + + +++V V ++S++L+ + Y Sbjct: 363 ADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERSLTLARLRYEN 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L++LD ER+ + +++L A+R + V + ++G G+ Sbjct: 423 GYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGGW 466 >gi|296389086|ref|ZP_06878561.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa PAb1] Length = 472 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 232/461 (50%), Gaps = 20/461 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +FSL L+ CTVGP+Y P + + ++L WW+ F+D +LN+LV Sbjct: 16 GLFSLLA--LSACTVGPDYRTPDTAAAKIDATASKPYDRSRFESL-WWKQFDDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ-- 119 + +L N + A R+ AA+ V D FP + A I P + + Sbjct: 73 EQSLSGNRDLRVAFARLRAARALRDDVANDRFPVVTSRASADIGKGQQPGVTEDRVNSER 132 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LDS W++DLFG+ RR +ESS A ++A A + ++++I++L+ +Y R + R Sbjct: 133 YDLGLDSAWELDLFGRIRRQLESSDALSEAAEADLQQLQVSLIAELVDAYGQLRGAQLRE 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA L+ K++ +L+ G ++L +++ +A + + + +P L+ H I+ Sbjct: 193 KIALSNLENQKESRQLTEQLRDAGVGAELDVLRADARLAATAASVPQLQAEAERARHRIA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TLLG E + S P + + IG P +L+R RPDIR E++LA S A +G+ Sbjct: 253 TLLGQRPEELTVDL---SPRDLPAITKALPIGDPGELLRRRPDIRAAERRLAASTADVGV 309 Query: 295 AKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +SL+G + T S G + WS GP + FD G +++ +R A++ A Sbjct: 310 ATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSVGPSISWAAFDLGSVRARLRGAKADA 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++++ VL A++E NA + + ++ + L E + + + I YR+G Sbjct: 370 DAALASYEQQVLLALEESANAFSDYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTDF 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y ++G G+ P Sbjct: 430 LVLLDAEREQLSAEDAQAQAEVELYRGIVAIYRSLGGGWQP 470 >gi|116050439|ref|YP_790742.1| multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|313107389|ref|ZP_07793580.1| multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa 39016] gi|115585660|gb|ABJ11675.1| multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|310880082|gb|EFQ38676.1| multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa 39016] Length = 472 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 232/461 (50%), Gaps = 20/461 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +FSL L+ CTVGP+Y P + + ++L WW+ F+D +LN+LV Sbjct: 16 GLFSLLA--LSACTVGPDYRTPDTAAAKIDATASKPYDRSRFESL-WWKQFDDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ-- 119 + +L N + A R+ AA+ V D FP + A I P + + Sbjct: 73 EQSLSGNRDLRVAFARLRAARALRDDVANDRFPVVTSRASADIGKGQQPGVTEDRVNSER 132 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LDS W++DLFG+ RR +ESS A ++A A + ++++I++L+ +Y R + R Sbjct: 133 YDLGLDSAWELDLFGRIRRQLESSDALSEAAEADLQQLQVSLIAELVDAYGQLRGAQLRE 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA L+ K++ +L+ G ++L +++ +A + + + +P L+ H I+ Sbjct: 193 KIALSNLENQKESRQLTEQLRDAGVGAELDVLRADARLAATAASVPQLQAEAERARHRIA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TLLG E + S P + + IG P +L+R RPDIR E++LA S A +G+ Sbjct: 253 TLLGQRPEELTVDL---SPRDLPAITKALPIGDPGELLRRRPDIRAAERRLAASTADVGV 309 Query: 295 AKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +SL+G + T S G + WS GP + FD G +++ +R A++ A Sbjct: 310 ATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSVGPSISWAAFDLGSVRARLRGAKADA 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++++ VL A++E NA + + ++ + L E + + + I YR+G Sbjct: 370 DAALASYEQQVLLALEESANAFSDYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTDF 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y ++G G+ P Sbjct: 430 LVLLDAEREQLSAEDAQAQAEVELYRGIVAIYRSLGGGWQP 470 >gi|15597691|ref|NP_251185.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa PAO1] gi|107101941|ref|ZP_01365859.1| hypothetical protein PaerPA_01002988 [Pseudomonas aeruginosa PACS2] gi|218891527|ref|YP_002440394.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa LESB58] gi|254235493|ref|ZP_04928816.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa C3719] gi|254240926|ref|ZP_04934248.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa 2192] gi|9948547|gb|AAG05883.1|AE004676_15 Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa PAO1] gi|126167424|gb|EAZ52935.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa C3719] gi|126194304|gb|EAZ58367.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa 2192] gi|218771753|emb|CAW27527.1| Multidrug efflux outer membrane protein OprN precursor [Pseudomonas aeruginosa LESB58] Length = 472 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 232/461 (50%), Gaps = 20/461 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +FSL L+ CTVGP+Y P + + ++L WW+ F+D +LN+LV Sbjct: 16 GLFSLLA--LSACTVGPDYRTPDTAAAKIDATASKPYDRSRFESL-WWKQFDDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ-- 119 + +L N + A R+ AA+ V D FP + A I P + + Sbjct: 73 EQSLSGNRDLRVAFARLRAARALRDDVANDRFPVVTSRASADIGKGQQPGVTEDRVNSER 132 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LDS W++DLFG+ RR +ESS A ++A A + ++++I++L+ +Y R + R Sbjct: 133 YDLGLDSAWELDLFGRIRRQLESSDALSEAAEADLQQLQVSLIAELVDAYGQLRGAQLRE 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA L+ K++ +L+ G ++L +++ +A + + + +P L+ H I+ Sbjct: 193 KIALSNLENQKESRQLTEQLRDAGVGAELDVLRADARLAATAASVPQLQAEAERARHRIA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TLLG E + S P + + IG P +L+R RPDIR E++LA S A +G+ Sbjct: 253 TLLGQRPEELTVDL---SPRDLPAITKALPIGDPGELLRRRPDIRAAERRLAASTADVGV 309 Query: 295 AKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DL+P +SL+G + T S G + WS GP + FD G +++ +R A++ A Sbjct: 310 ATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSVGPSISWAAFDLGSVRARLRGAKADA 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++++ VL A++E NA + + ++ + L E + + + I YR+G Sbjct: 370 DAALASYEQQVLLALEESANAFSDYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTDF 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y ++G G+ P Sbjct: 430 LVLLDAEREQLSAEDAQAQAEVELYRGIVAIYRSLGGGWQP 470 >gi|302343867|ref|YP_003808396.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301640480|gb|ADK85802.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 495 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 124/453 (27%), Positives = 231/453 (50%), Gaps = 24/453 (5%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y P P + + + K + D +WWE F D LN+L+ A Q N Sbjct: 25 GCLKVGPDYKTPETKT-PASWDLPDDK-FLKPDPAAIQRWWEVFGDPQLNELIVRAGQSN 82 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPNLKTNSTGQLDSD- 123 L + A R+ A NI VR ++ P+ AS S+ P T Q+ ++ Sbjct: 83 LDLRTAHARVKEAWANIGVVRGEIMPALSASGSYARQRGSEYAPTPGGVTFDNYQIGANA 142 Query: 124 -WKIDLFGQ-RRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W+IDLFG+ R IE++ A+ ++ +VD+ +++ +++ +Y R + +++ ++ Sbjct: 143 SWEIDLFGRISRSIEAATADYQASEEDRVDV-MVSLYAQVATTYFTIRATQAQLAATNEN 201 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + K+ + L+ +F G + L + + E + S ++++P L+ + + LLG P Sbjct: 202 IQSQKQVLALTQSRFRNGLANDLDVSQAETVLASTQAEVPPLKITLAKAYSAMDLLLGQP 261 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + QP + +G PAD++R RPDIR E++LA + A++G + LY Sbjct: 262 PGASAKLLGEVEPIAQPPRMV--AVGAPADILRQRPDIRRAERQLAAATARVGQDTARLY 319 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS SL G+I L N+ F + +S GP+ +F G I++ I+ ++ ++ + Sbjct: 320 PSFSLLGNIGLASTNASDLFRSGSYLFSLGPQFNWNVFQGGAIRAQIQVRDAQTEQALLN 379 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++TVL+A+KE ++A T+ + V L V ++++ L + Y++G +LD Sbjct: 380 YEQTVLSALKEAQDAQTAYVQQLARVEHLARTVSASRRTLKLGLELYKEGLTDFQSVLDA 439 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R + + L+ A+ + A + V LY A+G G+ Sbjct: 440 QRTLFQYDNQLAQARGEAAGNLVGLYKALGGGW 472 >gi|70733651|ref|YP_257291.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68347950|gb|AAY95556.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 493 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 120/460 (26%), Positives = 224/460 (48%), Gaps = 32/460 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLT 74 C VGP++ +P + + + +D+ +WWE FND L+ L L NL Sbjct: 28 CNVGPDFRRPQATQVQAWSAPAQAAASQAVDSAMQERWWEVFNDPQLSALSHRVLSDNLD 87 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------------- 121 + AT R+ ++ + A+ +PS+ A+ + K NS L+ Sbjct: 88 LQLATSRLQQSRAARQVITAERYPSTSANGGY----GRKRNSAEGLNDPSGNNGKSAFNL 143 Query: 122 ------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + W++D +G+ RR E++ A L+ A L+V+++ YI R + Sbjct: 144 WEAGFSASWELDFWGRVRRETEAADATLEVAENDRRGVLLSVLAETAQDYIQLRGVQSTR 203 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ Q L++ + +++LS L+ G + L + + A++ +IE+ +P L++ ++ +S Sbjct: 204 AVTEQNLEVARHSLKLSQLRLADGVATDLDVAEAAAQVATIEAQLPELQQRQAQLINALS 263 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG P + LH + S+ P + IG+P+ L RPDIR E +L + A IG+ Sbjct: 264 LLLGEP-PQALH-QELASDAPVPQPPSQVAIGLPSQLAERRPDIRQAEARLHAATASIGV 321 Query: 295 AKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK D YP ++L+G S AL + + + GP+ LP+FD G+++ ++ E+ Sbjct: 322 AKGDFYPRITLSGNFGSQALQLADFGSWSSRQFGIGPQFSLPLFDGGRLRGMLQLREAQQ 381 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 QE + +Q+TVL A E+++ LT N + L AV ++ ++ + Y +G Sbjct: 382 QEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQQYIEGVVDF 441 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L ++ A + L + ++ + V LY A+G G+ Sbjct: 442 VNVLTVQGALLATQEQLVESSAGVSLAMVGLYKALGGGWQ 481 >gi|310767124|gb|ADP12074.1| RND efflux system, outer membrane lipoprotein, NodT [Erwinia sp. Ejp617] Length = 515 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 125/478 (26%), Positives = 238/478 (49%), Gaps = 46/478 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC +GP+Y P P +P F + +K L + WW++FND L+ L++ A+Q Sbjct: 22 LSGCVLGPDYQPPR-PAMPEVFNSMQAQQGAKPLASATRADWWKAFNDPQLDSLIERAVQ 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI------------------- 109 NL++ QA RI A++ + R PS A S + + Sbjct: 81 GNLSLQQAVLRIAGARQQLNQARGAWAPSLSGNARFSRQQLGVKGELESQGIDDRLNGVD 140 Query: 110 ------PNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P L + G D+ W++DL+G+ RR +E + A + + + A +++ Sbjct: 141 NADSVRPALDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSVEERNDALVSL 200 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+ R + +D+ ++ + L+ + G + ++ A++ S+ Sbjct: 201 EAEVARAYLQLRGAQAITQTIETQIDVAQQTLVLTQSQQHNGLAPQTNVENARAQLSSLR 260 Query: 217 SDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + +P + ++ ++ L G P +++ P L +++G+P+ L R R Sbjct: 261 AQLPQYQAQIHQAMNGLAVLTGQVPGALDAELTPRKA---LPVLPPAVSVGVPSVLARRR 317 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTH-WSFGPKLYL 332 PD+R E L + A IG++ + L+PSLSL+G + + ++ +++H +SFGP + L Sbjct: 318 PDVRAAEASLHAATASIGVSVAQLFPSLSLSGQFGMRNSDASYLDNWSSHFYSFGPSVTL 377 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G++ S+++ A + + +++TVL A+++VENAL S D++ VT L +V+ Sbjct: 378 PIFQGGRLVSSVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDRQQVTGLDESVQA 437 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + +L+ YRQG S ++ LD +R A+V+ A+ Q V LY A+G G+ Sbjct: 438 LQNAFNLASDGYRQGLSSFIEPLDAQRQLAQVQQQAEQARVQSRLDLVALYKALGGGW 495 >gi|91778867|ref|YP_554075.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91691527|gb|ABE34725.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 486 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 216/460 (46%), Gaps = 27/460 (5%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + L+GC +GP+Y +P + P F +S +DT WW F D LN+L+ AL Sbjct: 16 LCLCLSGCLMGPDYVRPSVET-PATFRFSDSTQAQIVDT-AWWAQFGDPVLNELISTALA 73 Query: 71 QNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQLDSD---- 123 QN + A R++ + ++ R+ LFP + + + R P +++ + +D Sbjct: 74 QNRDLKIAAARVDEFRGQFVTTRSQLFPQISAGFNAGRQRVSPLAQSSLPAGIGTDYTSF 133 Query: 124 -------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W+ID+FG+ RR E++ ANL ++ L +++ + SYI+ R +++ Sbjct: 134 NATLPISWEIDVFGRVRRQTEAARANLLASEEGQRATLLTLVASVATSYINLRSLDQQLE 193 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA ++++ L+F G S++ L + ++E ++ +DIP +E +S Sbjct: 194 IARATAASRASSVKVFELRFKGGQISQVELAQSQSEYEASLADIPAIEAQIGQQEDALSV 253 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG L L P + G+P++L+ RPD+ E+ L + A IG Sbjct: 254 LLGRNPGPILR------GRTLDELQAPGVPAGLPSELLARRPDVLQAEQNLVAANALIGA 307 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL G + + F G W+F L PIF G I + +A++ Sbjct: 308 ARALYFPQISLTGLLGSSSTQLSRLFSGPANTWAFAGALTQPIFSAGNIAGQVEQAKARQ 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ +Q+ V +A +EV +AL + + ++ + + V+ L+ Y G S Sbjct: 368 QQALYAYQKAVQSAFQEVSDALLGVGKSRERLAAQERQVDALSTYAKLARQRYEGGYTSY 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++LD ER+ ++ + + S V LY A+G G+ Sbjct: 428 MEVLDAERSLFSAQLAYTQTRGNEYTSLVTLYKALGGGWG 467 >gi|227327455|ref|ZP_03831479.1| putative outer membrane efflux lipoprotein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 500 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 134/483 (27%), Positives = 236/483 (48%), Gaps = 49/483 (10%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFS------------------IGNSKNLINI-DTLKWWE 54 L+AGC VGP+Y +P PL P ++ + S N D WWE Sbjct: 15 LMAGCAVGPDYHRPDAPL-PARYQAQSAAERSVSKQPVSKQPVTTSGNAAQAADVAVWWE 73 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLK 113 SFND L++LV AL QNL + QA+ R+N A+ + + A L PS + R +++ Sbjct: 74 SFNDPLLSQLVSSALAQNLDLAQASARMNQAQAGLGAATAALLPSGNISGQGARAYQSVE 133 Query: 114 TNSTGQL------------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 T S GQL ++ W++D+FG RR +++LA+ ++ A V +L Sbjct: 134 T-SQGQLLNAVPGYSRYGNAYEADLNASWELDVFGGLRRGRQAALADYQASEAGVAATRL 192 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ YI R + R++IA + ++ ++ ++ L ++G ++ + + E + Sbjct: 193 AVAAQTADIYITLRGLQTRLAIATRQVNTQQQLLDKVQLLHSKGLAAEYQIRQTEGTLSQ 252 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++++P L+ ++ + +LG P H Q ++ P I G PADL+R Sbjct: 253 VQANVPVLQTGIDAAMNALDVMLGTP--PGTHRAQLSTSQAIPQSPTLIATGTPADLLRR 310 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKL 330 RPDI E+ LA S A+IG+A S+ YP SL+ + +++ N F + + L Sbjct: 311 RPDIIVAERHLAASNARIGVAISEYYPKFSLSALLGSATSVSSGNLFSNGASQSAGVLGL 370 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHA 389 +FD G+I + I +A+ E ++ +VL A ++VENA ++ +N + + T Sbjct: 371 RWRLFDFGRINAQIDQAKGQEAEALAAYRLSVLRATEDVENAFSALVNRETQATTLTAGE 430 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L S S I Y++G SL+D+L + + + A+ + A++ V + A+G G Sbjct: 431 TSLASARQS-SFIAYQKGTSSLIDVLHADETLLQTSDARAQAQTESARAAVATFKALGGG 489 Query: 450 YNP 452 + P Sbjct: 490 WQP 492 >gi|226946648|ref|YP_002801721.1| Outer membrane protein [Azotobacter vinelandii DJ] gi|226721575|gb|ACO80746.1| Outer membrane protein [Azotobacter vinelandii DJ] Length = 479 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 121/465 (26%), Positives = 229/465 (49%), Gaps = 35/465 (7%) Query: 15 LAGCTV-GPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L GC++ GP++ P P + + + L +D +WW+ F+D L+ L + A Sbjct: 14 LGGCSMLGPDFVAPDRGAEERWERPAEPGVYSRPTLQPLDP-QWWKLFDDPLLSSLQERA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ--------- 119 + NL + A+ R+ ++ ++ + P A+ F+ + +++G+ Sbjct: 73 MAGNLDLRTASARLRQSRAIFQTLSGEALPEVGANA---FVQRQRNSNSGRVDQSGREGK 129 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD+ W++D +G+ R IES+ A+++++ + +++ YI R Sbjct: 130 EAYNHGYASLDATWEMDFWGRVGRQIESAEASVEASEELRRSVLVLILADTASHYIRLRG 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP-TLEKSFRM 228 + ++ L++ ++N+EL+ ++F G ++L + + EAE+ ++E+ +P T E+ R+ Sbjct: 190 EQAFEAVIRDNLEIARRNLELTGIRFDNGVATRLEVAQAEAEVATVEARLPATRERQARL 249 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ +S LLG +Q + P +P+ G+P++L RPDIR E +L + Sbjct: 250 -INALSFLLGAGPNALRAELQASRDIPVPPKAVPL--GLPSELALRRPDIRAAEARLHAA 306 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG+A++D YP ++LNG P N + G LYLPIF+ G++K + Sbjct: 307 TASIGVAQADFYPRITLNGGFGFESSQFLPFEWQNRLFLLGSSLYLPIFEGGRLKGRLAL 366 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ QE + ++ TVL A EV++ALT ++ KL AV +++ + + Y Sbjct: 367 REAEQQEAAVAYRHTVLKAWHEVDDALTDYGTRQQRRVKLNEAVRQNEEVLGNARQQYLA 426 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++L +R VE + +A VDLY A+G G+ Sbjct: 427 GTVDFLNVLGAQRELLSVEEQRVRSDEAVALGIVDLYRALGGGWE 471 >gi|282891183|ref|ZP_06299686.1| hypothetical protein pah_c048o007 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498876|gb|EFB41192.1| hypothetical protein pah_c048o007 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 472 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 125/439 (28%), Positives = 228/439 (51%), Gaps = 41/439 (9%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--- 106 +WWE F D L + +++A N I A + A+ + A LFP A + Sbjct: 28 CEWWEVFEDPLLIEYIRMAALHNNDIRVAEANVCRARATRMVAAAPLFPQLSADFNGSRT 87 Query: 107 ---------------------------RF---IPNLKTNSTGQLDSDWKIDLFGQ-RRHI 135 +F +P +T LD W++DLFG+ RR++ Sbjct: 88 MFSKNGPLFQIPAPNAPTTPGATTPNAQFTIQVPQFQTLYNATLDMTWELDLFGKTRRNV 147 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 ES+ A + ++ Q++ ++V +++ +Y++AR +E+IS+ + +++ +K+ ++ + Sbjct: 148 ESADAKVSASIEQMNDRLISVFAEVARNYLEARTAQEKISLTKENINVLEKSADIIGRRV 207 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNN 254 G +++L L ++EAE+ + + IP E +++ +S L G P T + +S Sbjct: 208 KAGLSNQLDLERIEAEVAQVYATIPNFEALLFQSIYALSVLTGNLPETLVAELLPYRS-- 265 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIAL 311 P + ++IGI +D++R RPDIR E++LA + A IG+A ++ +P++SL G +L Sbjct: 266 -LPPIPSEVSIGIRSDILRRRPDIRAAERQLASATADIGVAVANFFPTISLFGDEGFQSL 324 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 N F G + WS+G + LPIF GK+ N+R AE+SA T+++TVL A++E E+ Sbjct: 325 MFSNLFQGASNTWSYGGDINLPIFQGGKLVGNLRVAEASATAAAYTYRQTVLQALQETES 384 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 ++ + ED K + + +V ++K + LS Y +G S+ D+LD ER ++ + A Sbjct: 385 SMVTFLEDLKTMRRYGDSVGRNEKIVQLSNERYVKGLVSITDLLDSERQLISIQQNRLDA 444 Query: 432 KRQLAKSYVDLYIAIGSGY 450 + V LY A+G G+ Sbjct: 445 ESAALLDLVRLYKALGGGW 463 >gi|21241209|ref|NP_640791.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|21106520|gb|AAM35327.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 503 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 30/446 (6%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWES 55 M+ LR + +L + L+ GC VGP+Y +P PL P Q + + + + W + Sbjct: 1 MSSLRTLAALVVASLVTGCAVGPDYARPEAPL-PDRYIGQADVAQRQAAVPTELSTWRDG 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKT 114 FND L++ V AL QNL + QA R++ A+ + + A L P+ S S R +L+T Sbjct: 60 FNDPDLSRYVNAALAQNLDLAQAGARVDPARAGLSAATAALLPAGNVSGSATRAYQSLET 119 Query: 115 ------NSTGQLD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 NST D + W++DLFG RR +++LA+ + A V +L V Sbjct: 120 PLGQVLNSTPNFDRHASVYEANLGASWELDLFGGLRRGRQAALADYQATEAGVAATRLAV 179 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ YI R + R+ +A + + + + + L +G ++L L + + + + Sbjct: 180 AAQTADIYIGVRGLQARLDVAQRQVATQQGLLSMVTLLHGKGLAAELQLQQAQGALAQAQ 239 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + +P LE ++ + +LG P + P I + G P DL+R RP Sbjct: 240 AGVPGLEAGLVAAMNALDAMLGVPPGTHRAELSAAIKPIPPAPQI-ADSGAPGDLLRRRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYL 332 D+ E++LA S A+IG+A ++ YP SL+G + A++ N F G S L Sbjct: 299 DLIVAERRLAASNARIGVAMAEYYPKFSLSGLLGSATAISGANLFTGDAAQSSGVLGLRW 358 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G+I + I +A+ EQ ++ VL A ++VENA T++ + ++ L V+ Sbjct: 359 RLFDFGRINAQIAQAKGQQAEQLAAYRLAVLRATEDVENAFTALIKREQQAVVLTQGVDA 418 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE 418 K+ S + Y +G SL+++L+ + Sbjct: 419 LGKARGASALAYEKGTVSLIEVLNAD 444 >gi|114320563|ref|YP_742246.1| RND efflux system outer membrane lipoprotein [Alkalilimnicola ehrlichii MLHE-1] gi|114226957|gb|ABI56756.1| RND efflux system, outer membrane lipoprotein, NodT family [Alkalilimnicola ehrlichii MLHE-1] Length = 488 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 126/479 (26%), Positives = 241/479 (50%), Gaps = 41/479 (8%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +AI +L VL LAGC VGP+Y P M L P + + + +D WW+ F+D + Sbjct: 3 KAITALAAVLILAGCAVGPDYQAPEMDLPEAWPESSLLADGERAAWVD---WWKRFDDPT 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFI 109 LN+LV+ A+ NL I R+ A+ + A+ P+ A++ F Sbjct: 60 LNQLVERAVANNLDIRLQAARLEEARARLGMASAEQLPTVDLQAEAARERGPATLQPAFP 119 Query: 110 ---PNLKTNS----TGQLDSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVIS 158 P +T++ +G L ++IDLFG +R E+ L L++ ++Q D +LN+I+ Sbjct: 120 GVEPRARTDNLFSVSGVLG--YEIDLFGRLAREREAAEAFL--LENVFSQ-DAVRLNLIA 174 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y D R +++++I L ++ L +++ G T +L+L + EAE++S ++ Sbjct: 175 DVVTTYFDLRAAQQQLAITENTLVSREETYALERVRYEAGETDELTLRQAEAELQSTRAE 234 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--NLYIPINI--GIPADLIRN 274 IP ++ + L+G E + + + P +++P ++ +P++L+ Sbjct: 235 IPLRQEQVSTLEGVLGVLVGMSPAELMTLDEMDLGEYTPLEAIHLPEDLPATLPSELLER 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E +L + A IG+A+++ P L+L G+ A + F G W G + Sbjct: 295 RPDVRAAEAELMAATAAIGVAQAERLPRLNLTALLGTAATDTSDLFTGAAETWGLGSSVA 354 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+FD G+ ++ + AE+ A + +Q TV++A EV +AL+ + ++ V Sbjct: 355 GPLFDFGRGRAGVEAAEAMAAQSRARYQATVISAFNEVRDALSLYRTSSQRAQAIRAQVA 414 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ L+ + Y++G +++LD +R+ E+ L+ A R + L+ A+G G+ Sbjct: 415 AVERTSQLAELRYQEGFIGFIEVLDAQRSLLAAELALAEAVRDQLNATATLFKALGGGW 473 >gi|172062825|ref|YP_001810476.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171995342|gb|ACB66260.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 495 Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 123/478 (25%), Positives = 223/478 (46%), Gaps = 44/478 (9%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LLAGCTVGP+Y P P PT + G N WW + D L+ L+ A Sbjct: 19 CLLAGCTVGPDYRGAPAAPDAPTFVRAPATGVDSNTPAPSA--WWHALGDRQLDDLIAAA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRFIPNLKTNS 116 L N + A R+ A++ + RA P S A+++ +P +N Sbjct: 77 LAHNPDLQAAQARLRASRAQLSQRRAAQLPKSSATVAAIRAREPDVSALGSLLPPGNSNQ 136 Query: 117 T-----------------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 + D+ W+IDLFG RR +E++ A ++ A + ++++ + Sbjct: 137 SDGSSPSLGGSGPLQLYSASFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQVSIAA 196 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+D R ++R++++ + +L ++ +EL+ + +G + + + +L ++++ + Sbjct: 197 EVATAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRARGVAADVDIERLTTQVETTRAS 256 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + L+ ++ ++ L G A L S P L + +G PA L++ RPDI Sbjct: 257 VIPLDAQVTESLDRLAILTGR-APGALDAALSASGAPLPTLPGSVPVGDPAALLKQRPDI 315 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLP 333 R E++LA S A+IG +D +P ++L G + + + PG+ N W P L Sbjct: 316 RAAERRLASSNAQIGEHIADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQWN 373 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 I D G+ + IR AE+S E +++ VL A+++ AL ++ V L Sbjct: 374 ILDFGRTRGAIRAAEASRDEAEANYRKAVLGALQDANTALQRYGHQREHVVALTKVQTSA 433 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ K +L K YV L ++G G+ Sbjct: 434 THSATLMDQRYRAGVASIIDLLDTQREALAAQQNVIAGKAELVKDYVSLQKSLGLGWQ 491 >gi|296155956|ref|ZP_06838795.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295893462|gb|EFG73241.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 486 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 214/460 (46%), Gaps = 27/460 (5%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + L+GC +GP+Y +P + P F +S +DT WW F D LN+L+ AL Sbjct: 16 LCLCLSGCLMGPDYVRPSIET-PATFRFSDSTQAQIVDT-AWWAQFGDPVLNELISTALA 73 Query: 71 QNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQLDSD---- 123 QN + A R++ + ++ R+ LFP + + + R P +++ + +D Sbjct: 74 QNRDLKIAAARVDEFRGQFVTTRSQLFPQISAGFNAGRQRVSPLAQSSLPAGIGTDYTSF 133 Query: 124 -------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W+ID FG+ RR E++ ANL ++ L +++ + SYI+ R +++ Sbjct: 134 NATLPISWEIDAFGRVRRQTEAARANLLASEEGQRATLLTLVASVATSYINLRSLDQQLE 193 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA ++++ L+F G S++ L + ++E ++ +DIP +E +S Sbjct: 194 IARATAASRAGSVKVFELRFKGGQISQVELAQSQSEYEASLADIPAIEAQIGQQEDALSV 253 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG L L P + G+P++L+ RPD+ E+ L + A IG Sbjct: 254 LLGRNPGPILR------GRTLDELQSPSVPAGLPSELLARRPDVLQAEQNLVAANALIGA 307 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL G + + F G W+F L PIF G I + +A++ Sbjct: 308 ARALYFPQISLTGLLGSSSTQLSRLFSGPANTWAFAGALTQPIFSAGNIAGQVEQAQARQ 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ +Q+ V +A +EV +AL + + + + + V+ L+ Y G S Sbjct: 368 QQTLYAYQKAVQSAFQEVSDALLGVGKSCERLVAQERQVDALNAYARLARQRYEGGYTSY 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++LD ER+ ++ + + S V LY A+G G+ Sbjct: 428 MEVLDAERSLFSAQLAYAQTRGNEYTSLVTLYKALGGGWG 467 >gi|94497417|ref|ZP_01303987.1| RND efflux system outer membrane lipoprotein NodT [Sphingomonas sp. SKA58] gi|94423048|gb|EAT08079.1| RND efflux system outer membrane lipoprotein NodT [Sphingomonas sp. SKA58] Length = 506 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 233/474 (49%), Gaps = 35/474 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 A S + L+ C GP+Y P + L P +S G+ L +WW ND +L+ Sbjct: 29 AWISGTALTLSACAAGPDYRAPQIGALGVPAAYSAGDGAALSEAQLGQWWTRLNDPALSA 88 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD 121 L+ A+ NL ++QA R+ A+E+++ A L P S A+ + ++ G+LD Sbjct: 89 LIDQAVANNLDVVQAQARLRQARESLIQSNASLLPQLSGSATGGRNYS---SQDAGGRLD 145 Query: 122 ----------------------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + W++DLFG+ RR E++ A+L+++ + ++ VIS Sbjct: 146 ANGNPIGGGGGNWSSSYSARINASWQLDLFGELRRGREAARADLEASGFDLATVRMTVIS 205 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +L+ +Y+ AR + ++ +A + + + N +++ + G S L + A++ + Sbjct: 206 ELVNNYVQARLAQAQLKVARETQAVQRDNYQIASWRLQAGLVSSLDEQQARAQLAQTNAT 265 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 IP LE S + +++ I+ L G + ++ + QP+ I GIPAD +R RPD+ Sbjct: 266 IPQLEASLKGSLNRIAVLTGQAPGDATRTLETPAPIPQPS--TDIATGIPADTLRQRPDV 323 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFD 336 R E+ LA + A+IG+A++ LYPSL ++G+I T N+F + G + IFD Sbjct: 324 RSAERALAAATARIGVAQAQLYPSLGISGNIGTTS-NAFSQLFELITGGVFANVAQTIFD 382 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ S +R +++ + + +++ VL+A+++VENA+ S+ + + A + + Sbjct: 383 GGRLASQVRAQKAATEAAFAAYKQNVLSALEDVENAMASLTSARARKAEFAIAYDASNNA 442 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ Y+ G + + E L+ A+ A + LY A+G G+ Sbjct: 443 AILARSQYQAGLIDFQTLSNSENTLLNARNSLASAQADEALAIAQLYNALGGGW 496 >gi|301061715|ref|ZP_07202456.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] gi|300444175|gb|EFK08199.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] Length = 498 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 233/465 (50%), Gaps = 39/465 (8%) Query: 16 AGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINID--TLK-WWESFNDTSLNKLVKIALQQ 71 +GC VGP Y KP + + P + SK + TL+ WW F+D LN L++ A Q Sbjct: 34 SGCAPVGPNYQKPEIKI-PDAWHEAISKEMARQPGATLQTWWRIFDDPVLNDLIEQARQS 92 Query: 72 NLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNS-----TGQ-- 119 NL I A I A++ + V P S++ H K + GQ Sbjct: 93 NLDIKIALSGIAASRARLGVVSGKELPNANVFGSFSRFKHSDQGPFKQMAPPGGFEGQNM 152 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +D+ W++D+FG+ RR IE++ A +++ + + +++ Y++ R + RI Sbjct: 153 FMVGVDALWEVDVFGRIRRQIEAAGAEYEASIEDYRDVMVTLFAEVALVYVEIRSCQRRI 212 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 A + KK +EL+ +F G +SKL + + + + E+ +P L ++ ++ Sbjct: 213 QCAEANAAIQKKMLELTRARFHSGISSKLDTAQATSNLANTEAAVPPLTIRLNTMINRLA 272 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPI-----NIGIPADLIRNRPDIRYQEKKLADSV 289 LL +Q++ ++ IPI IG+PADL+R RPD+R EK+LA Sbjct: 273 VLLDTNQ----ETLQRKLGG---SVSIPIAKENIGIGVPADLLRQRPDVRMAEKQLAAQT 325 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A +DLYP +++G L SF G + W + F GK +SNI Sbjct: 326 ARIGVATADLYPRFTISGFFGL-ETGSFSDIGGGSSLAWGIRSPVKWNFFSGGKTRSNIT 384 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 + A+++ + +++TVL A++EV NA+ + ++K +L+ AVE ++++ L ++ Y Sbjct: 385 FHKEIARQELLKYRDTVLKAMEEVRNAIVAHAQEKLRRNRLREAVEATREAVDLVIVQYE 444 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + ++LD +R+ + + L +++ + + + LY A+G G+ Sbjct: 445 TGLTNFNNVLDTQRSLFEQQDQLVVSEGDVVFNLIRLYKALGGGW 489 >gi|83649547|ref|YP_437982.1| outer membrane protein [Hahella chejuensis KCTC 2396] gi|83637590|gb|ABC33557.1| Outer membrane protein [Hahella chejuensis KCTC 2396] Length = 480 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 119/464 (25%), Positives = 224/464 (48%), Gaps = 27/464 (5%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNK 63 + S + +AGC TVGP+Y P P Q N + + ++ WW FND + K Sbjct: 8 LVSSLTLAMAGCMTVGPDYQAPEAP--AAQLQTFNQQQF-DFQRMEENWWGQFNDPRIEK 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNL------ 112 LV +AL N I +A + AA R D FP + Y++ + P Sbjct: 65 LVDLALADNHDIAKARANVKAAYAAFDDSRDDRFPKGGVGAEYSASRAKSAPTFSDAAKV 124 Query: 113 -KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + ++ G L W +D FG+ R IE++ A S+ A + ++ +I++++ Y D R Sbjct: 125 EQYSAGGNLS--WNLDFFGRVTRLIEAAEAEALSSDAALRNVQVEIIAEVVRVYADLRGA 182 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++ +A + L+ K ++L+ K+ G ++L +V+ +A+ ++ + L+ + Sbjct: 183 QAQVQVAQRNLENLKSVVDLTEAKYKSGVGAELDVVRSKAQYAGAQATLAPLQARIARDE 242 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ L G + + Q P + + IG PA L+R RPD+R E++LA + A Sbjct: 243 YRLAVLTGAEPGKLAVDLSYQPI---PQVATTLAIGDPAALLRRRPDVRVAERRLASASA 299 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A +DL+P + + G + + + WS P L +FD +K+ +R A Sbjct: 300 RIGVATADLFPKVEMTGFLGFISGSGSELLKSSSGAWSVAPTLNWAVFDWASLKARVRVA 359 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + +Q+TVL A+++ + + + ++ + LQ VE ++ ++ Y++G Sbjct: 360 EAHNEAALEDYQQTVLRALEDAQLSFVNYHQSQLRYLHLQAQVESSARAQEIAQAQYKEG 419 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LL +LD ER E A+ + K V++Y ++G G+ Sbjct: 420 FIDLLVLLDTERTRLAAEDAAMQAETDIMKGVVEIYRSLGGGWE 463 >gi|262278475|ref|ZP_06056260.1| RND efflux system outer membrane lipoprotein [Acinetobacter calcoaceticus RUH2202] gi|262258826|gb|EEY77559.1| RND efflux system outer membrane lipoprotein [Acinetobacter calcoaceticus RUH2202] Length = 478 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 129/472 (27%), Positives = 233/472 (49%), Gaps = 30/472 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNK 63 + + +LA CTVGP Y +P + L P + + + + D WW+SFND L + Sbjct: 8 LLPILTSILAACTVGPNYKRPSISL-PEHYLGARLNSPSDETKADIEVWWKSFNDPQLTR 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSS---------YASISHRF------ 108 V +AL+QNL + QA R+ A+ + +V A L P Y S+ Sbjct: 67 YVTLALKQNLDLAQAYTRVTQAQAGLSAVNASLRPIGTVDAQAAKVYQSVETPLGQVLNS 126 Query: 109 IPNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +PN + + L + W++D+FG RR ES+LAN ++ A +L V ++ Y Sbjct: 127 MPNFDRHGSSYEANLSATWELDIFGGLRRDRESALANYQASNAGASAVRLMVAAQTANLY 186 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I+ R + R+ IA Q L +K + + L +++G S+ + + +A + +++ +P L Sbjct: 187 INIRGLQSRLDIAQQQLQTQQKLLSIIQLLYSKGLASEFQVKQAKANVAQVQAVVPALGM 246 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++ + +LG P T + + PN+ G P+DL+R RPD+ E+ Sbjct: 247 NLDIAMNALDVMLGTVPGTHRAELAEVKPIPVIPNI---TETGTPSDLLRRRPDLIMAER 303 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +LA S A+IG A ++ YP +SL G S N F + L +FD G+I Sbjct: 304 QLAASNARIGSAIAEYYPKVSLGGLIGSATTASGNLFSSGANQAAGLLGLRWRLFDFGRI 363 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + IR A+ E+ +Q VL+A ++VEN+L+++++ ++ + LQ + ++ Sbjct: 364 NAEIRLAKGQEAEKLAAYQLAVLHAAEDVENSLSTLSKRQEQLVALQDGENALHHAQKIA 423 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +I Y++G S +++L + T + A+ A + V +Y ++G G+ P Sbjct: 424 LIAYQKGINSRIEVLQADSNTLQFTDKKVQAQTDSALAAVAVYKSLGGGWQP 475 >gi|78063040|ref|YP_372948.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77970925|gb|ABB12304.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 495 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 128/480 (26%), Positives = 227/480 (47%), Gaps = 48/480 (10%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVK 66 LLAGCTVGP+Y P P PT S DT WW + ND L+ L+ Sbjct: 19 CLLAGCTVGPDYRGAPAAPDAPTFVRAPAS----GFDTAAPAPSAWWHALNDRQLDDLIT 74 Query: 67 IALQQNLTILQATERINAAKENILSVRA------------------------DLFPSSYA 102 AL N + A R+ A++ + RA L PS+ + Sbjct: 75 AALAYNPDLHAAQARLRASRAQLSQQRAAQLPKSSATVAAIRMREPDVSALGSLLPSNGS 134 Query: 103 SISHRFIPNLKTNSTGQL-----DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 S S P+L + QL D+ W+IDLFG RR +E++ A ++ A + ++++ Sbjct: 135 SQSGGTSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQVSI 194 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+D R ++R++++ + +L ++ +EL+ + +G + + + +L ++++ Sbjct: 195 AAEVANAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRVRGVAADVDIERLTTQVETTR 254 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + L+ ++ ++ L G A L S+ P L + IG PA L++ RP Sbjct: 255 ASLIPLDAQVTESLDRLAILTGR-APGALDATLSTSDAPLPTLPGSVAIGDPATLLKQRP 313 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLY 331 DIR E++LA S A+IG +D +P ++L G + + + PG+ N W P L Sbjct: 314 DIRAAERRLASSNAQIGEHVADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQ 371 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 I D G+ + +R AE+S E +Q+ VL A+++ AL ++ V L Sbjct: 372 WNILDFGRTRGAVRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVVALTKVQT 431 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ + +L K YV + ++G G+ Sbjct: 432 SAVHSRTLMDERYRAGVASMIDLLDTQREALSAQQNVIAGQAELIKDYVSVQKSLGLGWQ 491 >gi|307822818|ref|ZP_07653049.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307736422|gb|EFO07268.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 471 Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 41/466 (8%) Query: 10 LFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L + L GC +GP+Y KP P+ P + ++ + DT +WWE F D L +L++ A Sbjct: 9 LLPLALTGCFMIGPDYQKPTAPI-PDAWRFAPAETVAASDT-RWWEQFGDPRLTQLIEQA 66 Query: 69 LQQNLTILQATERINAAKENILSV----RADLFPSSYASISHR----------FIPNLKT 114 L N + AT A E L + RADLFP S S++ +P + Sbjct: 67 LLHNKDLQIAT----ATVEEFLGLYSVTRADLFPQISGSASYQRQQISGVTAGALPTPAS 122 Query: 115 -NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARH 169 N L+ W+ID++G+ RR E++ ANL Y Q + + L +++ + SY+ Sbjct: 123 DNIQAALNLSWEIDVWGRLRRATEAARANL---YGQEETRRTVVLTLVTSVARSYVQLCE 179 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +R+ IA + L ++ ++ +F S + + E+E+ + + +P LE Sbjct: 180 LDQRLEIAKRTLVDRREAYRIARARFEGELNSSAEVRQAESEVHNTAASVPQLESLVAQK 239 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 H +S LLG+ PA Q L++P I G+P++L+ RPDIR E+ L Sbjct: 240 EHELSVLLGHNPAA-------VQRGLALTELHLPSIPAGLPSELLTRRPDIRKAEQDLIA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG+AK+ +P ++ GS + D S G W++G L +P+F GKI + Sbjct: 293 ANANIGVAKAAYFPKFTVTGSFGGASADFSQLLSGPAGAWNYGLGLAMPLFTAGKIAGQV 352 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + +E+ QE ++Q+T+L A +E ENAL ++ ++ V L V ++ L+ + Y Sbjct: 353 KASEAREQESLFSYQKTLLQAFQETENALIDNSKIQEQVQALNRQVIALREYRRLAWLRY 412 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G L +LD +R +E+ L+ A+ ++ +++Y A G + Sbjct: 413 NNGLTDYLVVLDAQRNLFNIELALATAQSNSLQAVINVYKAFGGSW 458 >gi|212633911|ref|YP_002310436.1| RND efflux system, outer membrane lipoprotein, NodT [Shewanella piezotolerans WP3] gi|212555395|gb|ACJ27849.1| RND efflux system, outer membrane lipoprotein, NodT [Shewanella piezotolerans WP3] Length = 501 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 23/456 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ +AGC +GP+Y +P + + P Q+ + ++ L N W E + D L L++ AL Sbjct: 37 VLFIAGCAMGPDYQRPDIDI-PEQYLEELQQTEGL-NAGLKHWREFYLDPELQLLIEHAL 94 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD------ 123 QNL + R+ AA+ N+ ADLFP + S + ST + D Sbjct: 95 DQNLDLEGVRSRLLAARANVTVTDADLFPVVGLNASGERALDSALTSTDPVKEDTFYVAG 154 Query: 124 ---WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DL+G RR E+ AN S+ +++A +++IS + Y + ++R I+ Sbjct: 155 TVSWELDLWGANRRRSEAEFANFISSQEALNLATISLISDVASRYYEWLDIEQRYQISLN 214 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 L KK +L+ L+ G S L + + E E +S + +P L+ + + LLG Sbjct: 215 TAQLRKKERDLARLRKQNGVISGLQVRQAEVEYQSAKVTLPDLDYERSEKANQLRILLGE 274 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 YP T K P+ + +GIP+ ++ RPD++ E+ L + A +G+AK Sbjct: 275 FKYPLTPKTEAQLKAEGPLFPDSFA---VGIPSQMLSQRPDVKTAEQALVAANANVGVAK 331 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P +++GS + F WS + PIF+ GKI + A+ A++ Sbjct: 332 TAFFPKFTISGSYGSESESLSDIFDSEGVTWSLLAGITAPIFNSGKISAQYDVAKEEAKQ 391 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++++ TVL A EV +A+ S + + Q VE + L+M+ YR G S LD Sbjct: 392 AMLSYRSTVLAAYFEVNDAMNSFRRSELAIEAQQELVEASTEYTRLAMLRYRNGVSSSLD 451 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++D +R ++ LS KR S + LY A+G G Sbjct: 452 LMDAQRNLFSAQLTLSQVKRDRLLSMITLYRALGGG 487 >gi|330720755|gb|EGG98977.1| outer membrane protein OprN precursor [gamma proteobacterium IMCC2047] Length = 468 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 124/460 (26%), Positives = 233/460 (50%), Gaps = 33/460 (7%) Query: 16 AGCT-VGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLK----------WWESFNDTSL 61 AGC VGP+Y P P F+ G S +L +D+ WW D +L Sbjct: 14 AGCAAVGPDYQAPAQP----DFAAGQTFASASLQRLDSQAMYLSNQPVNAWWLQLKDPTL 69 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNL 112 +LV+ AL N + A ++AA+ + L PS S AS + P Sbjct: 70 TRLVEQALVANTDLRVALANLSAARAVLRESATGLQPSLDLSAGSERSRASAVNSAQPEA 129 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T ++ L W++D+FG+ RR IE++ +N++ + A D + VI+ + +Y D R + Sbjct: 130 RTVNSASLGLAWELDVFGRVRRSIEAARSNIERSEALRDDVQRIVIADVASAYFDLRGAQ 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + ++ +EL+ +G +++L V+ A++ + ++ +PT+ ++ Sbjct: 190 ERRRVVERNIGNQQETLELTVTLAREGLSTELDTVRARAQLAATQALLPTIISDQNAALN 249 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G +QK+ + P + I +G A LIR RPDIR E+ LA VA+ Sbjct: 250 RLARLTGRVPGPLDVSLQKRGS--LPTMPAFIAVGDAASLIRRRPDIREAERGLASLVAQ 307 Query: 292 IGIAKSDLYPSLSLNGSI--ALTHDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+ +DL+P+++ S+ A +S ++ T+++ GP + +F++G I++ I +A Sbjct: 308 VGVVTADLFPTVNFTASVGVAAASGSSLSDHSATNYAVGPGIVWNLFNRGAIRARIEQAR 367 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + A+ Q + VL A++EV +AL +++++ L+ + ++++ L + Y G Sbjct: 368 AGAEAQLARYDGVVLQALEEVNSALMRHSQERERNRVLRESAAASREAVELVKLRYNAGV 427 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S LD+LD ER + E L+ + A+ ++LY A+G Sbjct: 428 ESFLDVLDAERTLLEAERQLTASNIDFAQQTINLYRALGG 467 >gi|77918705|ref|YP_356520.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] gi|77544788|gb|ABA88350.1| outer membrane protein [Pelobacter carbinolicus DSM 2380] Length = 470 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 226/470 (48%), Gaps = 22/470 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESF 56 M + AIF L ++L+GC+V +YT P P+ Q + S + WW+ F Sbjct: 1 MKSITAIF-LCTLVLSGCSVFRDYTPPENPVGAEQTDLTVSDAVRYKAAQEPVAAWWQKF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 +D L LV+ AL NL + A + A+ V D FP+ + ++ + N + S Sbjct: 60 DDPQLVALVEEALDTNLDVRIALANLGEARAMAREVGLDRFPTVTGNAAYFRLLNSRETS 119 Query: 117 TGQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 G D+ W++DLFG+ + I + A D+A V + V ++ + Sbjct: 120 AGNSVERDVNSYTAGFDALWELDLFGRVSQRIAAQKALTDAALNDVRQIYVTVSAEAART 179 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI+ R + R++IA + EL+ F G + L + + + S IP L+ Sbjct: 180 YIELRGAQYRLNIAERNARNQAGTYELTQKLFDGGRGTALDVSRAITQRDLARSRIPPLQ 239 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ +S L G L + + P+L + + +G L++ RPDIR E+ Sbjct: 240 AEVTAAINRLSVLTGRVPDALLEALS--GSKPLPSLPVTVAVGDAEGLLKRRPDIRTAER 297 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIK 341 +LA SVA+ +A +DL+P++S+ GSI + + SF S GP ++ FD G+++ Sbjct: 298 QLAASVARYNVAATDLFPTVSILGSIGFSATDLGSFGASALAGSLGPSIHWRAFDLGRVR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A++ + +++TVL A++E + AL++ + +++ LQ A + S L+ Sbjct: 358 AQMAQADARSIAALAAYEKTVLKALEETQTALSNFSREEERRGTLQQAARSARHSAQLAK 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y QG + LD+LD ER + E L+ ++ A + +Y A+G G+ Sbjct: 418 QRYEQGMDAFLDVLDAERTQLQTEDALAASETTAALDLIAIYKALGGGWQ 467 >gi|115358025|ref|YP_775163.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115283313|gb|ABI88829.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 495 Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 122/477 (25%), Positives = 224/477 (46%), Gaps = 42/477 (8%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 LLAGCTVGP+Y P P PT F + + + WW + D L+ L+ AL Sbjct: 19 CLLAGCTVGPDYRGAPAAPDAPT-FVRAPATGVDSTAPAPSAWWHALGDRQLDDLIAAAL 77 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRFIPNLKTNS- 116 N + A R+ A++ + RA P S A+++ +P+ +N Sbjct: 78 AHNPDLQAAQARLRASRAQLSQQRAAQLPKSSATVAAIRAREPDVSALGSMLPSGNSNQS 137 Query: 117 ----------------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 + D+ W+IDLFG RR +E++ A ++ A + ++++ ++ Sbjct: 138 GGSSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQVSIAAE 197 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+D R ++R++++ + +L ++ +EL+ + +G + + + +L ++++ + + Sbjct: 198 VATAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRARGVAADVDIERLTTQVENTRASL 257 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ ++ ++ L G A L S P L + +G PA L++ RPDIR Sbjct: 258 IPLDAQVTESLDRLAILTGR-APGALDAALSASGTPLPTLPGSVPVGDPAALLKQRPDIR 316 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPI 334 E++LA S A++G +D +P ++L G + + + PG+ N W P L I Sbjct: 317 AAERRLASSNAQVGEHIADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWIGAPYLQWNI 374 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 D G+ + IR AE+S E +Q+ VL A+++ AL ++ V L Sbjct: 375 LDFGRTRGAIRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVIALAKVQTSAT 434 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S +D+LD +R + ++ K +L K YV L ++G G+ Sbjct: 435 HSATLMDQRYRAGVASTIDLLDTQREALAAQQNVIAGKAELVKDYVSLQKSLGLGWQ 491 >gi|330818240|ref|YP_004361945.1| outer membrane efflux protein [Burkholderia gladioli BSR3] gi|327370633|gb|AEA61989.1| outer membrane efflux protein [Burkholderia gladioli BSR3] Length = 514 Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 120/467 (25%), Positives = 222/467 (47%), Gaps = 36/467 (7%) Query: 17 GCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLT 74 GCTVGP Y P P T + + T WW+S ND L++L+ AL N Sbjct: 22 GCTVGPNYKGAPTAPSAATFVRAPQTGVAVATPTPAAWWQSLNDPRLDELIAAALAHNPD 81 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNS---------------- 116 + A R+ A+ + RA+ P + A ++ P++ S Sbjct: 82 LHAAQARLREARAQLSQQRANALPKTSADLAAIRTRAPDMNALSALTGANNANGGNSQAG 141 Query: 117 -------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T D+ W+IDLFG RR IE++ A ++ A + ++++ +++ +Y+D R Sbjct: 142 TGPIQLYTASFDATWEIDLFGGTRRAIEAASAQAEAVDADLADTQVSIAAEVANAYVDLR 201 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++R++++ + DL ++ ++L+ + +G + + +L ++++ + + L+ Sbjct: 202 DQQQRLALSRRTADLQQQQLDLTRQRRGRGVAADADIERLTTQVENTRASLIPLDAQVTE 261 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ ++TL G A L +N P+L + IG PA +++ RPD+R E++LA S Sbjct: 262 SLDRLATLTGR-APGALDAQLSGANPALPSLPASVPIGDPAAMLKQRPDVRAAERRLASS 320 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGKIKSN 343 A+IG +D +P ++L G + + + PG+ N W P L +FD G+ + Sbjct: 321 NAQIGEHIADYFPKVTLLGDLGFSAGD--PGHLFRKQNWTWVGAPYLQWNLFDFGRTRGA 378 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE+S E + + VL A+++ AL+ + V L S +L Sbjct: 379 VRAAEASRDEAEANYTKAVLGALQDANTALSRYGHQRDHVVALDKVQTSAVHSATLMDQR 438 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G SL+D+LD +R + ++ + +L K YV L ++G G+ Sbjct: 439 YRAGVSSLIDLLDTQRDALSAQQNVIAGQAELIKDYVSLQKSLGLGW 485 >gi|74317433|ref|YP_315173.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] gi|74056928|gb|AAZ97368.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] Length = 520 Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 124/464 (26%), Positives = 227/464 (48%), Gaps = 20/464 (4%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINI-----DTLKWWESFNDT 59 A+F+ ++ L GC TVGP + P P LP ++ +++ D +WW S D Sbjct: 50 ALFAFVVLALTGCVTVGPGHVAPE-PSLPAHWATPDAQPHAGYVARQSDLGQWWRSLGDP 108 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L LV AL+ + A R+ AA+ AD FPS AS S R + +G Sbjct: 109 LLVTLVDEALRTGPDVRSAEARLRAARARRAVAGADRFPSVNASGSARHSDSNAQVGSGS 168 Query: 120 L--------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + D+ W++D+FG+ RR +E++ A+ +S+ A++ A++++ +++ +Y++ R Sbjct: 169 MQDLYSVGFDASWELDVFGRVRRSVEAAGADHESSQAELANARVSLAAEVALTYVEVRVL 228 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + R+ IA L + ++L+ + G S + A ++ + IP+LE S Sbjct: 229 QIRLGIARANLASQTETLQLTDWRAQAGLVSSQDSEQARANLEQTRAQIPSLETSLAEAA 288 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + LLG P + + P L + +GIPAD +R RPD+R E+ LA A Sbjct: 289 YRLDLLLGVPPGTLTPRLA--TGGELPALPAEVAVGIPADTLRQRPDVRAAERMLAAETA 346 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 ++G+A++ +PS SL+GSI L S + PIFD G++++ + + Sbjct: 347 RVGVAQAARFPSFSLSGSIGLEALTLGGLSDSGATRSLLAGITAPIFDAGRLRAQVDVQD 406 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + ++ TVL A++EVE+AL ++ +++ L + + + Y G Sbjct: 407 AVREQARVAYERTVLTALQEVESALVALARNRERSEALAKGAAAARNAADFARQRYSTGL 466 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LD ER+ +E L+ + + + LY A+G G++P Sbjct: 467 IDFQSVLDTERSVLALEDSLASTRADGVLALIRLYKALGGGWSP 510 >gi|261820853|ref|YP_003258959.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium wasabiae WPP163] gi|261604866|gb|ACX87352.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium wasabiae WPP163] Length = 495 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/475 (27%), Positives = 232/475 (48%), Gaps = 38/475 (8%) Query: 14 LLAGCTVGPEYTKPHMPLL------------PTQFSIGNSKNLINIDTLK-WWESFNDTS 60 L+AGC VGP+Y +P PL Q SI N I + WWE FND Sbjct: 15 LMAGCAVGPDYHRPDAPLSDRYQAQSVAKQSAAQQSIEKQGNAIQSTNIAVWWEGFNDPL 74 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKT----- 114 L++LV AL QNL + QA+ R+ ++ + + A L PS S + R +++T Sbjct: 75 LSELVSSALSQNLDLAQASARVIQSRAGLGAATAALLPSGSISGQGARAYQSVETPQGRL 134 Query: 115 -NSTG-----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 NST L++ W++D+FG RR +++LA+ ++ A V +L V ++ Sbjct: 135 LNSTSGYNRYGNAYETDLNASWELDIFGGLRRDRQAALADYQASEAGVTATRLAVAAQTA 194 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 YI R + R+ IA++ ++ ++ + L ++G ++ + + E + +++ +P Sbjct: 195 DIYITLRGLQARLEIANRQVNTQQELRDKVQLLHSKGLAAEYQVRQAEGTLSQVQATVPV 254 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ ++ + +LG P + QP +IP G PADL+R RPDI Sbjct: 255 LQTGIDSAMNALDVMLGTPPGTHRTQLASPGAIPQPPQFIPT--GTPADLLRRRPDIIVA 312 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ LA S A+IG+A S+ YP SL+ + +++ N F + + L +FD Sbjct: 313 ERHLAASNARIGVAISEYYPKFSLSALLGSTTSVSSGNLFSNGASQSAGVLGLRWRLFDF 372 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I + I +A+ E ++ +VL+A ++VENA +++ + T L + Sbjct: 373 GRINAQIDQAKGQEAEALAAYRLSVLSATEDVENAFSALLNRETQTTTLTAGETALASAR 432 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S I Y++G SL+D+L + ++ + A+ + A++ V + A+G G+ P Sbjct: 433 QSSFIAYQKGTASLIDVLHNDETLLQISDARAQAQTESARATVAAFKALGGGWQP 487 >gi|317053210|ref|YP_004118977.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] gi|316952949|gb|ADU72421.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 498 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 123/473 (26%), Positives = 238/473 (50%), Gaps = 43/473 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTL------KWWESFNDTSLNKLVK 66 ++GCTVGP++ KP P ++ S + L+N+ +WW+ ++D +LN LV+ Sbjct: 25 VSGCTVGPDFKKPEQKA-PADWTSWRSADPALLNVPGAAAVADNQWWKRYDDPTLNMLVE 83 Query: 67 IAL------------------QQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 AL QQ +T Q T +NA + +++ PS+ A Sbjct: 84 KALTASPDIRTAALRFASARAQQRITSSQQTPNVNATASITRNQQSENSPSTRAL--KEV 141 Query: 109 IPN------LKTNS----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 +PN L T+ G LD W+ID +G RR IE++ A+ + AQ++ A+L+++ Sbjct: 142 LPNPDELITLMTDPYNWYQGGLDFSWEIDFWGHVRRAIEAAEADSAAQQAQLEFARLSIV 201 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ SY + R +++I +A + + L + GA L + +E+ + + Sbjct: 202 GDVVNSYWNLRGIQQQIRLAKDDERALDERLSLIRARTLSGAQDNTDLERQRSELAATRA 261 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ L+ + + + LL +Q + ++ Q P+ +GIP+ + NRPD Sbjct: 262 NLIELQAQEGVTTNQLLLLLNERPGALKTLLQFKPDSLQAGNLPPLPLGIPSVVASNRPD 321 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPI 334 I+ E L + A+IG+A+++LYPS+++ I + +F + + WS GP L LPI Sbjct: 322 IKAAEAHLHAATARIGVAEAELYPSITIGARIGMDTYSAGNFGEWGSRSWSVGPSLNLPI 381 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD+G+ K+ + E+ Q+ + +Q+TVL A +E+++AL+ + ++ + + Q E Sbjct: 382 FDRGRRKATVVLRETDQQQAAVDYQKTVLRAWQEIDDALSRYSAAQQKLAEQQTRAESSA 441 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++++L Y G S +++LD +R+ + L++ +R L ++ + A+G Sbjct: 442 QALALIEARYNGGLTSFINVLDAQRSDIQARQALAMGQRDLKTAWAAVNRAVG 494 >gi|190573812|ref|YP_001971657.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] gi|190011734|emb|CAQ45354.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] Length = 472 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 129/460 (28%), Positives = 235/460 (51%), Gaps = 28/460 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIAL 69 ++LAGC +VGP Y P + Q G + + + + WW F+D L +LV AL Sbjct: 12 LVLAGCVSVGPNYKAPVQEPVVLQ---GAQQPVFSTTSPVASWWAQFDDPVLEELVHGAL 68 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQ-------- 119 NL + A R++ A+ + R D P ++ S R P+ + GQ Sbjct: 69 SDNLDLRVAVARVSQARAVFVESRFDQAPHITAGGSYDRRKQPDPQLG--GQRVFSESYQ 126 Query: 120 --LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++DLFG++R + +LD+ A + A++ V +++ +Y + R ++RI++ Sbjct: 127 LGFDAGWELDLFGRKRRAAEAARADLDAEQANLADAQVLVAAEVARNYFELRGTQKRIAV 186 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A L + +L+ ++ GA S+L + A +K+IE+DIP LE + + + ++ L Sbjct: 187 AQHTLVNLRDTQKLTEARWELGAGSELDVQSSRARLKAIEADIPLLEVAETQSRNRLAVL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG E L M + P + +G +L+R R D+R E++LA + A++G+A Sbjct: 247 LGQ-RPETLTAMLAPHDV--PAFAKALPLGDTRELLRQRADVRVAERRLAAATARVGVAT 303 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +DL+P LSL+G + + G N WS P L FD G +++ +R +++ A+ Sbjct: 304 ADLFPRLSLSGFVGFLGGEASGLVNGNNKAWSLTPSLSWAAFDFGTVRARLRASKAEAEG 363 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ VL A+++ ENALT ++ + + + + +++ SL+ I YR+G L Sbjct: 364 VAAQYEQAVLLALEDTENALTRYSKQQARLAIVVEQAQAARRAESLAQIRYREGSEDFLT 423 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS-GYNP 452 +LD +R + L+ A+ ++ S V +Y A+G G +P Sbjct: 424 LLDAQRTQLAADDALAAAESEVNVSVVGVYKALGGWGQSP 463 >gi|188989847|ref|YP_001901857.1| outer membrane exporter [Xanthomonas campestris pv. campestris str. B100] gi|167731607|emb|CAP49782.1| outer membrane exporter [Xanthomonas campestris pv. campestris] Length = 490 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 132/479 (27%), Positives = 235/479 (49%), Gaps = 32/479 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESF 56 M LR + L LAGC VGPEY +P PL P ++ ++ +D +WW F Sbjct: 1 MPSLRTLTVLLAASLAGCAVGPEYARPDAPL-PDRYLAQDAAEQRSAAAPVDLSRWWAGF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTN 115 D +L++ V AL QNL + QA R+ A+ + + A L PS S + R +L+T Sbjct: 60 GDPALDRYVTAALAQNLDLAQAAARVTQARAGLGAANAALLPSGSINGQATRAYQSLET- 118 Query: 116 STGQL------------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 GQ+ ++ W+ID+FG RR +++LA+ ++ A +L V Sbjct: 119 PLGQVLRNTPDFDRYVSVYEATANASWEIDVFGGLRRGRQAALADYQASAAGAAATRLAV 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R + R+++A + + ++ + + L +G + L + + + + + Sbjct: 179 AAQTADTYISIRGLQARLAVAQRQVATQQQLLAMVTLLQGKGLAADLQVHQAQGALTQAQ 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + +P LE + ++ + +LG AT H + ++ P P DL+R RP Sbjct: 239 AGVPALETALTAAMNALDVMLG--ATPGTHRAELVASTPIPTAPQVTGAASPGDLLRRRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI----ALTHDNSFPGYNTHWSFGPKLYL 332 D+ E++LA + A+IG+A ++ YP SL+G I A++ N F G + L Sbjct: 297 DLIVAERRLAVANARIGVAMAEYYPKFSLSGLIGSATAISGANLFTGDAAQSAGVLGLRW 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G+I + I +A+ EQ ++ VL A ++VENALT++ + ++ T L V+ Sbjct: 357 RLFDFGRINAQIAQAKGQEAEQLAAYRLAVLRATEDVENALTALVKREQQATVLAQGVDA 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ S Y +G SL+++L+ + A + A+ + A+S V + A+G G+ Sbjct: 417 LGKARGASAAAYEKGVVSLIEVLNADDALLRTSDAQLQAQTEAARSAVAAFKALGGGWE 475 >gi|187918872|ref|YP_001887903.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187717310|gb|ACD18533.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 472 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 132/469 (28%), Positives = 225/469 (47%), Gaps = 34/469 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLN 62 R + ++ AGCTVGP+Y +P + P+ F + +++ ++WW FND L+ Sbjct: 6 CRLLAAVCACWFAGCTVGPDYHRPAVDT-PSSFRYASPDAEVVDQGAVQWWSQFNDPVLD 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNL----KTN 115 L++ AL QN + A R++ +++ RA LFP +++ R +P Sbjct: 65 GLIQRALDQNKDLAIAAARVDEFYGRLMTTRAGLFPQVGANFGGGRGRSVPAPGFAPAVG 124 Query: 116 STGQLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + QLD + W+IDLFG+ RR E++ A+ A ++ +IS + SY+ R + Sbjct: 125 NQVQLDVMASWEIDLFGRLRRLTEAARADYLGTQAAQQATRIALISSVATSYLLLRDLDQ 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R+ IA L + L +FT G S+L + + ++E +S ++ + ++ + Sbjct: 185 RLEIAKSTLASRADALSLFQERFTGGVVSQLQVSQAKSEYESAQASVYAFQQQIAQQENA 244 Query: 233 ISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +S LLG P + L + + I G+P+ L+ RPDI E+ L Sbjct: 245 LSLLLGDNPGPIPRGKPLTQLSAPA----------IPAGLPSSLLERRPDILQAEQALVS 294 Query: 288 SVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +PS+SL G S AL+ + G WSF + PIF G I Sbjct: 295 ANASIGAARAQYFPSISLTGMFGAASTALS--GLWTGPARIWSFAGAISQPIFTGGAITG 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++R AE+ QE ++++ + +A +VENAL + + + VE + SL+ Sbjct: 353 SVRTAEAQQQEALFSYEQAIQSAFADVENALVGVARVRDQLQATNRQVEALAQYASLARD 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S L++LD ER+ ++ S + Q V LY A+G G+N Sbjct: 413 LYEGGYTSYLEVLDAERSLFNAQLQQSQLQDQQLAEIVALYKALGYGWN 461 >gi|113866641|ref|YP_725130.1| outer membrane protein [Ralstonia eutropha H16] gi|113525417|emb|CAJ91762.1| outer membrane protein [Ralstonia eutropha H16] Length = 518 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 117/426 (27%), Positives = 200/426 (46%), Gaps = 30/426 (7%) Query: 17 GCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC VGP+Y KP +P Q + + D WWE F D L + V++AL QNL Sbjct: 47 GCAVGPDYRKPEVPTADRFLGQRDVEQRRAATRADLEVWWEGFGDPQLTRFVRLALDQNL 106 Query: 74 TILQATERINAAKENILSVRADLFPSSYASIS------------HRFI---PNLKTNST- 117 + A+ R+ A + A L PS S R + PN + + Sbjct: 107 NLAVASARVTQAGAGLRFATAALLPSGAVSAQAAKQYQSLETPLGRVLNATPNFDRHGSL 166 Query: 118 --GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + W+ID+FG RR E+S A ++ A + ++ V ++ +Y+ R + R+ Sbjct: 167 YEADLTASWEIDIFGGLRREREASQAEYQASEAGLAATRVEVAAQAADTYVTIRGLQARL 226 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 SIA Q +D +K + L + +G + L + + E + +E+ IP LE ++ + Sbjct: 227 SIARQQVDTQQKLVSTVRLLYAKGLAAALEVQQAEGALAQVEATIPELEAGLDAALNAMD 286 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG P T ++ P + G PADL+R RPD+ E++LA S A+IG Sbjct: 287 VLLGSQPGTYRAELADIKAIPAAPRIEA---TGTPADLLRRRPDLIVAERRLAASNARIG 343 Query: 294 IAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A ++ YP +SL+G + + N F + L +FD G+I + I +A+ Sbjct: 344 AAIAEYYPKVSLSGLLGSATTVASGNLFSASANQAAGVAGLRWRLFDFGRIGAQIDQAKG 403 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 E ++ VL+A ++VENA T++ + ++ L+ + +++ + S Y +G Sbjct: 404 QEAEALAGYRLAVLHASEDVENAFTALVKREEQTNALERGEQALRQARNSSFAAYEKGVV 463 Query: 410 SLLDIL 415 L+++L Sbjct: 464 RLIEVL 469 >gi|78060838|ref|YP_367413.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77965388|gb|ABB06769.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 499 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 229/465 (49%), Gaps = 45/465 (9%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+YT P PL N L++ D + WW+ ++D LN LV+ AL Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANG-TLVSRDAVPGNWWQLYDDPVLNGLVRDAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALEVASQQGGFSGGAEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y+++ Sbjct: 134 PVVNEGTVG-INVSYEIDLFGKLRRGVEAARADSEAVRAAGDLARITVVADVVRAYVESC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + +++A Q L L K+ + LS G ++ + + +++++ +DIP E ++ Sbjct: 193 SAGDELAVAKQSLALQKQRVALSQRLRDAGRGNQTDVTRGVTQVRTLAADIPRFEGRRKV 252 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LL + + + P L PI IG A L+R RPD+R E++LA + Sbjct: 253 AQYQLAALLARSPADLPKAVAE--CEHLPKLRQPIPIGDGAALLRRRPDVRAAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTEALRTAYESARNSADETHRLYL 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R V+ ++ A+ Q+A V L++A+G G+ Sbjct: 429 AGRESFISDLDATRTLTSVQAQVAAAEGQVATDQVRLFLALGGGW 473 >gi|182415620|ref|YP_001820686.1| RND efflux system outer membrane lipoprotein [Opitutus terrae PB90-1] gi|177842834|gb|ACB77086.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutus terrae PB90-1] Length = 476 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 131/472 (27%), Positives = 235/472 (49%), Gaps = 28/472 (5%) Query: 1 MNILRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESF 56 M IL F+ + A VGP+Y +P +P L + G K D L WW F Sbjct: 1 MKILALFFAFTTLGFAALPKVGPDYYRPDLPPLASYRDAGGWKTADPADALPRGAWWNLF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASI--------SH 106 D L+ L AL N + A R+ A+ R D +P +++ ++ + Sbjct: 61 GDPVLDGLETRALAANQDLRAAAARVEQARAAAGIARGDYWPQLAAHGAVIREQTSQTTE 120 Query: 107 RFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKLIPSY 164 P+ +T + L + W++DLFG+ R + S ++ +A A + +L++ + + +Y Sbjct: 121 NVFPDPRTTTYRAPLTAAWELDLFGRVRRLNESARDVAAASEATFESVRLSLTADVAANY 180 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + + + L ++ +EL+ + G + L + E E+ S E++ TL Sbjct: 181 FALRATERELVLLDDTVRLRRRALELATARVRSGTAADLDAARAETELASTEAERATLAN 240 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + ++TL+G PA+ F+ + + +P L ++P G+P++L+ RPDI E+ Sbjct: 241 QRSALANALATLVGEPASGFVLAVVEH----EPVLPHVPA--GLPSELLERRPDIAAAER 294 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 LA + A+IG+AK+ +P++SL GS D + WS GP+LYLPIF G+ Sbjct: 295 SLAAANARIGVAKAAFFPAISLTGSAGYASADIDRLTESDSRIWSIGPQLYLPIFQGGRN 354 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++N+ R+ ++ E +++ VL A++EV++ALT+ + Q A+E +++ L+ Sbjct: 355 RANLARSRAAYDEAVAAFRQRVLVALREVQDALTASRLIGEEAAAQQRALESSRRAQRLA 414 Query: 401 MINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 I Y G S L+++D +R A A + RQLA + V L A+G G++ Sbjct: 415 QIRYDAGYVSYLEVIDAQRTALATERATARLIGRQLA-TRVALIKALGGGWH 465 >gi|95930203|ref|ZP_01312941.1| Hydrophobe/amphiphile efflux-1 HAE1 [Desulfuromonas acetoxidans DSM 684] gi|95133666|gb|EAT15327.1| Hydrophobe/amphiphile efflux-1 HAE1 [Desulfuromonas acetoxidans DSM 684] Length = 1503 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 125/455 (27%), Positives = 228/455 (50%), Gaps = 30/455 (6%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 ++ GC TVGP+Y +P ++ F +D WW FND L +LV+ AL N Sbjct: 1053 IMNGCITVGPDYQRPDPVVIEGAFEQA-------VDVGDWWTQFNDPLLTELVQQALANN 1105 Query: 73 LTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ-------LDSD 123 + A R+ A+ + +A L+P+ + S+S + + G+ +++ Sbjct: 1106 RDLKTAVARVREARATLARSKAALWPTLDALGSVSRSKTSENASENAGESTLYDTGVNAA 1165 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID+FG RR +E++ A+ S + +++V ++ +YI R + ++ +A L Sbjct: 1166 WEIDVFGGTRRSVEAANADWQSMLIDLGDVQVSVAAETALAYIALRTVQYQLVVARDNLA 1225 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 + ++ + + G + L+L + ++S S IPTLE + + L+G P Sbjct: 1226 IQQETHAILADRRQAGLDNDLALQQATYNLESTRSSIPTLEAKVESAYNALCVLIGVLPG 1285 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L + + P + + GIPADL+R RPD++ E++LA A+IG+A +DLYP Sbjct: 1286 SVALEPLSQI-----PRSTVEVE-GIPADLLRRRPDVQRAERQLAAQTARIGVATADLYP 1339 Query: 302 SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI-T 357 +L GSI L N+ + +S P + PIF G I++NI+ + + +EQY+ Sbjct: 1340 RFTLTGSIGLESLNTSDLLTSESERYSIIPGVQWPIFYFGSIRNNIK-VQQAVREQYLQA 1398 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ VL A++EV NAL ++++ L AV + + L+ YR G +LD Sbjct: 1399 YESAVLTAVEEVRNALMDYRKEQERYVALNRAVTAAQTAEFLAKDQYRNGLTDFNAVLDA 1458 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +R+ + +++ ++++ V LY A+G G+ P Sbjct: 1459 QRSLLSFQEQRVVSEGAVSQNIVRLYRAMGGGWTP 1493 >gi|182678989|ref|YP_001833135.1| RND efflux system outer membrane lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634872|gb|ACB95646.1| RND efflux system, outer membrane lipoprotein, NodT family [Beijerinckia indica subsp. indica ATCC 9039] Length = 525 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 238/492 (48%), Gaps = 51/492 (10%) Query: 6 AIFSL--FIVLLAGC-TVGPEYTKPHMPLLPTQ---------------FSIGNSKNLIN- 46 AIF++ L GC +VGP+Y P P+LP + S G +K ++ Sbjct: 10 AIFAIVSLSTGLGGCLSVGPDYVGPD-PMLPAKSFYGPPEPAAAVAALPSQGPAKGPVSP 68 Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--- 103 +D L WW +F D +L LV+ A NL + A+ R+ ++ A P+ + Sbjct: 69 VDPL-WWRTFRDPTLTSLVQRAAGANLDVRTASMRLAQSRFERGVTAAAALPTGNGNASY 127 Query: 104 ----ISHRFIPNLKTNSTGQL-----------------DSDWKIDLFGQ-RRHIESSLAN 141 IS++ + L QL D+ W++D++G RR IE++ A Sbjct: 128 NRQQISNQGVVTLVNPLVQQLGVGAFTVPPINVWSPTFDASWELDIWGHVRRQIEAADAQ 187 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +D+A Q ++ +++L YI R + +I I + + ++L+ + +G T+ Sbjct: 188 MDAAEEQRRAMLVSTMAELARDYIQLRGVQAQIGILKDNIVSSEDILKLTRTRAEKGMTT 247 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 L + A+++S ++ +P+LE ++ +S LL P + K + P + Sbjct: 248 GLDVENAAAQVESEKAQLPSLEDQQIELINALSLLLDSPPGALNDELIK--SKPIPPVPP 305 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFP 318 + +GIP++L R RPDIR E +L + A IG+A ++ YP++ LNGS+ AL N + Sbjct: 306 QVPLGIPSELARRRPDIRQAEAQLHSATANIGVAVAEFYPTVKLNGSVGANALDFKNLWK 365 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 ++FGP +P+FD G++K+ + E+ QE I + +TVL A EV N LT+ + Sbjct: 366 PSALQYNFGPSFAVPLFDGGRLKATLHLREAQQQEAAIAYHKTVLGAWHEVVNTLTAYQK 425 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 +++ +L V+ ++ +SLS Y G + +LD ER + + + ++ Sbjct: 426 EQQRRARLNAQVDHARQVLSLSRTRYNTGVTDFITVLDAERTLLGAQQQYAQSTTNVSTD 485 Query: 439 YVDLYIAIGSGY 450 V LY A+G G+ Sbjct: 486 LVALYKALGGGW 497 >gi|330953402|gb|EGH53662.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 487 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 129/470 (27%), Positives = 222/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRAATPSDGMAKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNLKTNST 117 LV+ N T+ Q + A+ + S RA P+ S N T+++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNTGTSAS 138 Query: 118 G-------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQY 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPVTTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD GK + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGKRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G+N Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWN 478 >gi|309779682|ref|ZP_07674441.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] gi|308921623|gb|EFP67261.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] Length = 498 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 128/479 (26%), Positives = 220/479 (45%), Gaps = 45/479 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKLV 65 + +LLAGC VG +Y P PL T+ G L + + WWE F+D L +LV Sbjct: 1 MLALLLAGCAVGRDYHTP--PLSGTEAPQGWHATLPHHGSRMALAHWWEQFHDPVLTQLV 58 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFI------------ 109 + A + TI QA R+ A+ ++ + RA L P S A+ F Sbjct: 59 EHADATSPTIAQAVGRVREARASVSTSRAALLPQLKGSGSATRQGGFGGSQFAGGAGGLS 118 Query: 110 -----PNLK----TNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLNVISK 159 P L T Q D+ W+IDLF G+RR +E + A L ++ A A++++ ++ Sbjct: 119 AGALNPTLGLGTITTLAAQADASWEIDLFGGKRRSLEGADARLTASEADWHDARVSLAAE 178 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R + + I L ++ ++L+ KF G + + +A + + + Sbjct: 179 VANTYLQQRECEALVDIGAATLSSRQETLQLTERKFRAGFVAPADFAQAQATVGDAVNAL 238 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF--QPNLYIPINIGIPADLIRNRPD 277 + + L G + K S P+ +P +PA ++ RPD Sbjct: 239 EGQRAQCAQGIDKLVALTGLDHDALNGLLSKASAQIPAPPDAGVPD---VPAQVLSQRPD 295 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNT----HWSFGPKLYL 332 + E+ +A + A +G+A + PS++L GSI + NS+ G + WSFGP + L Sbjct: 296 VSSAERAVAGASADVGVAVASRLPSITLAGSIGI---NSYRLGGQSLTSKSWSFGPSVSL 352 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD G + + A + + +++ V A++EVE+AL ++ ++ V A Sbjct: 353 PIFDGGAGAARVETARARYDQALASYRSKVRQAVQEVEDALVRLDASERRVDAATMADAQ 412 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + K + S YR G SLL + D+ R + L+ K + A+++V LY A+G G+ Sbjct: 413 YAKVLEASNARYRLGAGSLLQLEDVRRTALQASQSLAAVKLERAQAWVALYKAVGGGWR 471 >gi|292487766|ref|YP_003530639.1| outer membrane efflux protein [Erwinia amylovora CFBP1430] gi|292898995|ref|YP_003538364.1| efflux pump outer membrane protein [Erwinia amylovora ATCC 49946] gi|291198843|emb|CBJ45953.1| putative efflux pump outer membrane protein [Erwinia amylovora ATCC 49946] gi|291553186|emb|CBA20231.1| Outer membrane efflux protein precursor [Erwinia amylovora CFBP1430] Length = 515 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 127/482 (26%), Positives = 230/482 (47%), Gaps = 54/482 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L GC GP+Y P P+ P F+ G +K L + WW++F D LN L++ A+Q Sbjct: 22 LGGCAPGPDYQPPR-PVTPEVFNSMPPQGGAKILPSAPRADWWKAFGDPQLNSLIERAVQ 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------PNLKTNST------ 117 NL++ Q RI A++ + R PS AS + RF L++ Sbjct: 81 GNLSLQQTVLRIAGARQQLDQARGAWAPS--ASGNARFSRQQLGIKGELESQGVDDRLNG 138 Query: 118 ----------------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 G D+ W++DL+G+ RR +E + A + + + A + Sbjct: 139 MGNADSLRPVLDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSVEERNDALV 198 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ +Y+ R + +D+ + +EL+ + G + ++ A++ S Sbjct: 199 SLEAEVARAYLQLRGAQAITRTIETQIDVAQLMLELTRSQQQNGLAPQTNVENARAQLSS 258 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P + ++ ++ L G P +++ P + +G+P++L R Sbjct: 259 LRAQLPHYQAQIHQAMNGLAVLTGKVPGALDAELTPRKALTLLPPA---VPVGVPSELAR 315 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP 328 RPD+R E L + A IG++ + L+PSLSL+G + NS Y WS FGP Sbjct: 316 RRPDVRAAEASLHAATASIGVSVAQLFPSLSLSGQFGVR--NSDASYLDRWSSNFYSFGP 373 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF G++ S ++ A + + +++TVL A+++VENAL S D + VT L Sbjct: 374 SITLPIFQGGRLVSGVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDLQQVTGLDD 433 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + + + +L+ ++YRQG S ++ LD +R A+++ A+ Q V LY A+G Sbjct: 434 SAQALQNACNLASVSYRQGLSSFIEPLDAQRQLAQLQQQAEQARVQSLLDLVALYKALGG 493 Query: 449 GY 450 G+ Sbjct: 494 GW 495 >gi|94310211|ref|YP_583421.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354063|gb|ABF08152.1| Outer membrane efflux family protein precursor [Cupriavidus metallidurans CH34] Length = 512 Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 226/465 (48%), Gaps = 24/465 (5%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L VLL C +VGP+Y +P + + +S+ + + D +WW + +D L++L+ Sbjct: 27 LALSCVLLTACASVGPDYREPPPVDVGSGWSLPLASESQSADLSQWWSALDDPILDRLMA 86 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHR-----------FIPNLK 113 AL QNL + QA RI+ A+ V + P++ A S++ R IP L Sbjct: 87 TALAQNLDLRQAAARIDEARALRDRVAGEALPTAAAGASVNRRRQSENGPLPVGSIPGLD 146 Query: 114 TNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T D+ W+ DLFG +RR +E + A L + A+ ++ +++++ ++ A Sbjct: 147 ATQTIYDAGFDAAWEADLFGAKRRALEGANARLQATEAEAQGIRMRIVAEVARTWFTAVG 206 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + LD ++ EL L+ G S + A+ ++ + IP ++ R Sbjct: 207 ARYELHAQQATLDTLQQTWELVRLRHALGDASTADVEAAYAQWTAVNALIPDIQARQRAA 266 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V ++ LLG P L + P+ + +G AD++R RPD+ E++LA S Sbjct: 267 VLSLGVLLGAPPERELALLD---GPLTPSTLRALPVGERADMLRRRPDVLAAERRLAASS 323 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG+A ++L+P LS+ G AL+ + F ++ +S P + +FD G++++ IR Sbjct: 324 ADIGVATAELFPKLSIGVGGGFQALSTGDWFDASSSRFSILPLISWRLFDGGRVRAEIRA 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ ++ + +++ VL A+ + E AL + + + A++ + S + Y Sbjct: 384 REAGQRQAALAYEQAVLAALGDAERALGDYHGGLDTLERRGMALDAARTSYGHAKARYAA 443 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++L +R+ + E + A A V LY A+G G++ Sbjct: 444 GDIALVELLAAQRSLHEAETAAARAHTNAAVQLVALYKALGGGWD 488 >gi|294627198|ref|ZP_06705785.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598437|gb|EFF42587.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 498 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 124/445 (27%), Positives = 216/445 (48%), Gaps = 29/445 (6%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESF 56 M+ LR + +L + L+ GC VGP+Y +P PL Q I + + + WW+ F Sbjct: 1 MSSLRTLAALVVASLVTGCAVGPDYARPEAPLQDRYIGQADIAQRRAAVPAELSTWWDGF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKT- 114 ND L++ V AL QNL + QA R+ A+ + + A L P+ S S R +L+T Sbjct: 61 NDPDLSRYVNAALAQNLDLAQAGARVAQARAGLSAATAALLPAGNVSGSATRAYQSLETP 120 Query: 115 -----NSTGQLD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 +ST D + W++DLFG RR +++LA+ + A +L V Sbjct: 121 LGQVLDSTPNFDRHASVYEANLGASWELDLFGGLRRGRQAALADYQATEAGAAATRLAVA 180 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ YI R + R+ +A + + + + + L ++G ++L L + + + ++ Sbjct: 181 AQTADIYISVRGLQARLDVAQRQVATQQGLLSMVTLLHSKGLAAELQLRQAQGALAQAQA 240 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P LE + + +LG P H + + P + G P DL+R RPD Sbjct: 241 GVPGLEAGLVAATNALDVMLGVPPGT--HRAELSAIKPIPPAPQIADSGTPGDLLRRRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLP 333 + E++LA S A+IG+A ++ YP SL+G + A++ N F G S L Sbjct: 299 LIVAERRLAASNARIGVAMAEYYPKFSLSGLLGSATAISGANLFTGDAAQSSGVLGLRWR 358 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+I + I +A+ EQ ++ VL A ++VENA T++ + ++ L V+ Sbjct: 359 LFDFGRINAQIAQAKGQQAEQLAAYRLAVLRATEDVENAFTALIKREQQAAVLTQGVDAL 418 Query: 394 KKSMSLSMINYRQGRYSLLDILDIE 418 K+ S + Y +G SL+++L+ + Sbjct: 419 GKARGASALAYEKGTVSLIEVLNAD 443 >gi|289673890|ref|ZP_06494780.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 487 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 221/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRAATPSDGMAKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S RA P+ + S S Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSAS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQY 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPATTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G+N Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWN 478 >gi|77458708|ref|YP_348214.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382711|gb|ABA74224.1| putative RND efflux system, outer membrane lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 486 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 133/481 (27%), Positives = 239/481 (49%), Gaps = 33/481 (6%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSIGNS----KNLINIDTL-KWWE 54 M LR I L L++GC VGP+Y +P P+ + +G S ++ D L WW+ Sbjct: 1 MPPLRPIALLVTAGLMSGCAVGPDYHRPDAPI--SDHYVGQSAVEPRSESTPDNLVAWWK 58 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLK 113 +FND L + ALQQNL + QA+ R+ A+ + + A L PS S ++ + R +++ Sbjct: 59 NFNDPLLTDFINQALQQNLDLAQASARVTQARAGLGAANAALLPSASISAQAARAYQSVE 118 Query: 114 T------NST-----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 T NST L++ W++D+FG RR E++LA S+ A +L Sbjct: 119 TPLGQVLNSTPGYDRYGNAYEANLEAGWEVDVFGGLRRGREAALAEYQSSAAGFTATRLA 178 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ YI R + R+ IA++ ++ + +E L + +G ++ + + E E+ + Sbjct: 179 IAAQTADIYITLRGLQARLEIANRQVETRRALLEKVRLLYGKGLAAEYQVRQAEGELSQV 238 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ +P L+ ++ + LLG P H Q P++ +G PADL+R R Sbjct: 239 QATVPVLQSGLEAAMNAMDVLLGTPPG--THRTQLAREGEIPDVPSLNRLGTPADLLRRR 296 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLY 331 PD+ E++LA S A+IG A ++ YP SL+ + A++ N F + + L Sbjct: 297 PDLIVAERRLAASNARIGEAIAEYYPKFSLSALLGSATAVSGGNLFTSGASQSAGVLGLR 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD +I + I +A+ E ++++VL A ++VENAL+S+ + T L E Sbjct: 357 WRLFDFARINARIDQAKGQESEALAAYRQSVLRATEDVENALSSLVNRQTQTTTLTGGEE 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ S Y +G SL+D+L + + + A+ + A++ V ++ ++G G+ Sbjct: 417 ALTQARQSSFTAYEKGTASLIDVLHADETLLQASDARAQARTESARAAVAVFKSLGGGWQ 476 Query: 452 P 452 P Sbjct: 477 P 477 >gi|330900291|gb|EGH31710.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 487 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 220/470 (46%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRTATPSDGMAKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S RA P+ + S S Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSTS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQY 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPATTSIPQLPHIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EFDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G+N Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWN 478 >gi|209517826|ref|ZP_03266661.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209501772|gb|EEA01793.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 522 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 129/462 (27%), Positives = 228/462 (49%), Gaps = 29/462 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 V L GC VGP YT P L+ P + + + +N+ T+ WW+ ++D LN L Sbjct: 27 VALNGCINVGPNYTLPKQALVNAPHANGPIEGADPRLTSTLNVPTV-WWKLYDDPVLNGL 85 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRF-----IPN 111 V AL+ N + A + ++E + +A S AS+S +F +P Sbjct: 86 VDQALKSNTDLRVAAANLARSREALSIAQAQGGFSGDASVSIERAQESAEQFLLTEKLPV 145 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ SY++ Sbjct: 146 ANLGDMG-INVSYEIDLFGKLRRGVEAAAADTEAVEAAGDLARITVVADVVRSYVEQCSA 204 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E + IA Q L L K+ ++LS G ++ ++ + +I+++ +DIP ++ Sbjct: 205 AEELRIAEQSLALQKERVDLSRRLRDAGRGNQTAVTSGQTQIENLRADIPRYTARRKIAQ 264 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LL ++ + + + P + PI IG A L+R RPD+ E++LA S A Sbjct: 265 YRLAMLLAQSPSQLPPAV--LACDRLPQIRQPIPIGDGAALLRRRPDVHEAERQLAASTA 322 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IG+A LYPS+S+ S T P T W+FGP + F + + AE Sbjct: 323 RIGVATGALYPSISIGASAGFTGILEDIPTSPTARWAFGPLISW-TFPTNGARQRVHEAE 381 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +S+Q + VL A++E E +L + D L+ A++ KS + YR GR Sbjct: 382 ASSQVALAHFDGVVLTALRETETSLATYTYDYARAESLRAALQSAAKSADETHRLYRAGR 441 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + LD R + L+ A+ Q+A V+L++++G G+ Sbjct: 442 ESFISDLDATRTLTAAKSQLAAAEGQVAVDQVNLFLSLGGGW 483 >gi|294011589|ref|YP_003545049.1| putative outer membrane protein [Sphingobium japonicum UT26S] gi|292674919|dbj|BAI96437.1| putative outer membrane protein [Sphingobium japonicum UT26S] Length = 489 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 120/466 (25%), Positives = 218/466 (46%), Gaps = 33/466 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++L+GC GP+Y P L P + G L + WW +D +L+ L+ A+ Sbjct: 20 LVLSGCAAGPDYRAPAPAALGVPAAYIQGAGAPLDEAELAAWWTRLDDPALSGLIDRAIA 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD--------- 121 NL I+QA R+ A+E++ RA P + S S + + ++ G+LD Sbjct: 80 HNLDIVQAQARLRQARESLRQARAAFLPQANGSASGGRNYSSR-DAGGRLDPSGNPIGGG 138 Query: 122 -------------SDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + W++DLFG+ R + S Y ++ + ++S+L+ +Y+ Sbjct: 139 GSNWSSSYSVGANASWQVDLFGELSRSAEAARADLAASGYDLANV-RATIVSELVANYVQ 197 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 AR +E++ IA + + + N +++ + G S L + A++ + +P LE Sbjct: 198 ARLAQEQLRIARETQAIQQDNYNIANWRLQAGLVSSLDAEQARAQLAQTNATVPQLEAGL 257 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 R +++ I+ L G E ++ + P I GIPAD +R RPD+R E+ LA Sbjct: 258 RGSLNRIAVLTGQAPGEATRSLE--TPAPIPAAPARIATGIPADTLRQRPDVRSTERALA 315 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSNI 344 + A+IG+A++ LYPSL ++G+I T NSF + + G + IFD G++ S + Sbjct: 316 AATARIGVAQAQLYPSLGISGNIGTTS-NSFKDLFSLVTGGVFANVAQVIFDGGRLASQV 374 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R ++ + +++ VL A+++VENA+ S++ + + A E + L+ Y Sbjct: 375 RSQRAATDAAFAAYKQAVLTALEDVENAMASLSSARARKAEFATAYEASNNAAILARSQY 434 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G + E + L+ A+ LY A+G G+ Sbjct: 435 QAGLIDFQTLSQSENSLLNARNSLAGAQSDEVLGLAQLYNALGGGW 480 >gi|254522205|ref|ZP_05134260.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] gi|219719796|gb|EED38321.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] Length = 473 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 132/461 (28%), Positives = 239/461 (51%), Gaps = 30/461 (6%) Query: 13 VLLAGC-TVGPEYTKP-HMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++LAGC +VGP Y P P++ Q + S + + WW F+D L +LV A Sbjct: 13 LVLAGCVSVGPNYKAPVQEPVVLQGAQQPVFTSTSPVA----SWWAQFDDPVLEELVHGA 68 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQ------- 119 L NL + A R++ A+ + R D P ++ S R P+ + GQ Sbjct: 69 LSDNLDLRVAVARVSQARAVFVESRFDQAPHITAGGSYDRRKQPDPQLG--GQRVFSESY 126 Query: 120 ---LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 D+ W++DLFG++R + +LD+ A + A++ + +++ +Y + R ++RI+ Sbjct: 127 QLGFDAGWELDLFGRKRRAAEAARADLDAEQANLADAQVLIAAEVARNYFELRGTQKRIA 186 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A L + +L+ ++ GA S+L + A +K+IE+DIP LE + + + ++ Sbjct: 187 VAQHTLVNLRDTQKLTEARWELGAGSELDVQSSRARLKAIEADIPLLEVAETQSRNRLAV 246 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG E L M + + P + +G +L+R R D+R E++LA + A++G+A Sbjct: 247 LLGQ-RPEVLTAML--APHEVPAFAKALPLGDTRELLRQRADVRVAERRLAAATARVGVA 303 Query: 296 KSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +DL+P LSL+G + L D S G N WS P L FD G +++ +R +++ A+ Sbjct: 304 TADLFPRLSLSGFVGFLGGDASGLVNGNNKAWSLTPSLSWAAFDFGTVRARLRASKAEAE 363 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++ VL A+++ ENALT ++ + + + + +++ SL+ I YR+G L Sbjct: 364 GVAAQYEQAVLLALEDTENALTRYSKQQARLAIVVEQAQAARRAESLAQIRYREGSEDFL 423 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS-GYNP 452 +LD +R + L+ A+ ++ S V +Y A+G G +P Sbjct: 424 TLLDAQRTQLAADDALAAAEAEVNVSVVGVYKALGGWGQSP 464 >gi|254883855|ref|ZP_05256565.1| outer membrane protein oprM [Bacteroides sp. 4_3_47FAA] gi|254836648|gb|EET16957.1| outer membrane protein oprM [Bacteroides sp. 4_3_47FAA] Length = 460 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 29/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 17 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 75 Query: 72 NLTILQATERIN--AAKENILSVRADLFP------------SSYASISHRFIPNLKTNST 117 N + A R+ AA + I A+LFP S+Y +++ P L Sbjct: 76 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGSAYAQKEGSNYGGDNYKNDPEL----G 129 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G+L W++DL+G R + S+A + K++++S++ +Y + ++I Sbjct: 130 GKLTVTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNI 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 190 VRQTLYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFL 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA Sbjct: 250 AG----EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAY 305 Query: 297 SDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++++P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ Sbjct: 306 TNMFPRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLKAKKAAYEQE 364 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++VL A KE NA+ N+ K I K +M L+ + Y G LD+ Sbjct: 365 CYSYEKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDV 424 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++ LS A R + V LY A+G G+ Sbjct: 425 LDAQRSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 460 >gi|319641471|ref|ZP_07996162.1| outer membrane protein oprM [Bacteroides sp. 3_1_40A] gi|317386904|gb|EFV67792.1| outer membrane protein oprM [Bacteroides sp. 3_1_40A] Length = 457 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 29/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 14 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 72 Query: 72 NLTILQATERIN--AAKENILSVRADLFP------------SSYASISHRFIPNLKTNST 117 N + A R+ AA + I A+LFP S+Y +++ P L Sbjct: 73 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGSAYAQKEGSNYGGDNYKNDPEL----G 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G+L W++DL+G R + S+A + K++++S++ +Y + ++I Sbjct: 127 GKLTVTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNI 186 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 187 VRQTLYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA Sbjct: 247 AG----EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAY 302 Query: 297 SDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++++P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ Sbjct: 303 TNMFPRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLKAKKAAYEQE 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++VL A KE NA+ N+ K I K +M L+ + Y G LD+ Sbjct: 362 CYSYEKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++ LS A R + V LY A+G G+ Sbjct: 422 LDAQRSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 457 >gi|157375420|ref|YP_001474020.1| outer membrane efflux protein [Shewanella sediminis HAW-EB3] gi|157317794|gb|ABV36892.1| outer membrane efflux protein [Shewanella sediminis HAW-EB3] Length = 501 Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 126/458 (27%), Positives = 220/458 (48%), Gaps = 29/458 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LLAGC +GP+Y +P + L P Q+ G N I +W + + D L L+ A Sbjct: 33 TLLAGCAMGPDYQQPELDL-PGQYHNELQQGEGDN---IGKTQWRDFYLDPQLQPLINHA 88 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQLDSD---- 123 L QNL + R+ AA++ I A L+P + R + + TN+ + + Sbjct: 89 LAQNLDLEAMRSRLIAARQRITVTDAALYPKVGIDAYGERSLDSGLTNTEPSSEDEFNLS 148 Query: 124 ----WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++D++G RR E+ AN SA +++A +++IS + Y + ++R I+ Sbjct: 149 GVVSWELDIWGANRRRSEAEYANFLSAQESLNLATISLISDVASRYYEWLDIEQRYQIST 208 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L KK ++L+ L+ G S L + + E E +S + +P L+ + + LLG Sbjct: 209 NTVALRKKELDLARLRKENGVISGLEVRQAEVEFQSAKVTLPDLDFERGEKANQLRILLG 268 Query: 239 YPATEFLHYMQKQSN---NFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 EF + +Q Q+ + L+ N+G+P++++ RPD++ E+ L AK+G+ Sbjct: 269 ----EFGYPLQLQTEAELRVEDALFPAQFNVGVPSEMLSQRPDVKAAEQALIAMNAKVGV 324 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ +P +++GS D N WS + PIF+ G I + A+ + Sbjct: 325 AKTAFFPKFTISGSFGRESDELSNLLDSEGVTWSLLGGITAPIFNAGSISAQYEIAKEES 384 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ + ++ TVL A EV +A+ S + + Q V + L+ + YR G S Sbjct: 385 KQALLAYRNTVLRAYFEVNDAMNSFRRSELAINAQQELVAASSEYNRLAGLRYRNGVASS 444 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD++D +R ++ LS KR S + LY A+G G Sbjct: 445 LDLMDAQRKLFSAQLALSQIKRDRLLSMITLYRALGGG 482 >gi|269120097|ref|YP_003308274.1| RND efflux system, outer membrane lipoprotein, NodT family [Sebaldella termitidis ATCC 33386] gi|268613975|gb|ACZ08343.1| RND efflux system, outer membrane lipoprotein, NodT family [Sebaldella termitidis ATCC 33386] Length = 491 Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 119/415 (28%), Positives = 220/415 (53%), Gaps = 17/415 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 WW +D +L +L+ ++L N +++A R+N A+ + +A+L P A I Sbjct: 69 WWNILDDDTLTQLITLSLNNNKNLMEARARVNEARAALGISQAELLPWLDSNNFWGRAKI 128 Query: 105 SHRFIPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLI 161 S P + +L D+ W+ID+FG R+ ++++ ++L + A + +++ S++ Sbjct: 129 SDNITPEIGITDIYRLGIDASWEIDIFGGNRYKVKAAESDLLAQNALLHSTWVSISSEVA 188 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R +ER++IA L L + +I+L K G T +L+L + + ++ IP Sbjct: 189 VNYLSLRTLQERLAIAESNLALQETSIKLLQSKNKAGLTDELNLNQAKYTANQTKAAIPA 248 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ S ++N++ L G + ++ P++ I +GIPA+ +R RPDI+ Sbjct: 249 IKISIEEILNNLAILTGQVPGSLEKTLSERKE--LPDVNEMIYVGIPAEALRQRPDIQAA 306 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E KL +A+ A++DL P LSL GSI +LT + G + +S P++ PIF+ G Sbjct: 307 EYKLESQIARTKSARTDLLPKLSLFGSIGLESLTSGSLLSGASKGFSLLPQISFPIFNAG 366 Query: 339 KIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 I+ NI +S+ +EQY+ ++ TVLNA EV NALT++ ++ + T L+ V ++ Sbjct: 367 AIRKNIN-VQSAREEQYLAAYENTVLNAAAEVRNALTAVAQESEKNTSLKDGVANASAAL 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ Y G +LD +R+ ++ +I+K Q + V L+ A+G G+ P Sbjct: 426 KIAQNKYNNGLTDYQSVLDAQRSLLSLQDQYAISKGQKVSNLVGLFKALGGGWKP 480 >gi|194365348|ref|YP_002027958.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194348152|gb|ACF51275.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 473 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 129/460 (28%), Positives = 237/460 (51%), Gaps = 28/460 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIAL 69 ++LAGC +VGP Y P + Q G + + + + WW F+D L +LV AL Sbjct: 13 LVLAGCVSVGPNYKAPVQEPVVLQ---GAQQPVFSTTSPVASWWAQFDDPVLEELVHGAL 69 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQ-------- 119 NL + A R++ A+ + R D P ++ S R P+ + GQ Sbjct: 70 SDNLDLRVAVARVSQARAVFVESRFDQAPHVTAGGSYDRRKQPDPQLG--GQRVFSESYQ 127 Query: 120 --LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++DLFG++R + +LD+ A + A++ V +++ +Y + R ++RI++ Sbjct: 128 LGFDAGWELDLFGRKRRAAEAARADLDAEQANLADAQVLVAAEVARNYFELRGTQKRIAV 187 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A L ++ +L+ ++ GA S+L + A +K+IE+DIP LE + + + ++ L Sbjct: 188 AQHTLVNLRETQKLTEARWELGAGSELDVQSSRARLKAIEADIPLLEVAETQSRNRLAVL 247 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + + + P + +G +L+R R D+R E++LA + A++G+A Sbjct: 248 LGQRPETLTAML---APHEVPAYAKALPLGDTRELLRQRADVRVAERRLAAATARVGVAT 304 Query: 297 SDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +DL+P LSL+G + L D S G N WS P L FD G +++ +R +++ A+ Sbjct: 305 ADLFPRLSLSGFVGFLGGDASGLVNGNNKAWSLTPSLSWAAFDFGTVRARLRASKAEAEG 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ VL A+++ ENALT ++ + + + + +++ SL+ I YR+G L Sbjct: 365 VAAQYEQAVLLALEDTENALTRYSKQQARLAIVVEQAQAARRAESLAQIRYREGSEDFLT 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS-GYNP 452 +LD +R + L+ A+ ++ S V +Y A+G G +P Sbjct: 425 LLDAQRTQLSADDALAAAEAEVNVSVVGVYKALGGWGQSP 464 >gi|312171882|emb|CBX80139.1| Outer membrane efflux protein precursor [Erwinia amylovora ATCC BAA-2158] Length = 515 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 230/482 (47%), Gaps = 54/482 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L GC GP+Y P P P F+ G +K L + WW++F D LN L++ A+Q Sbjct: 22 LGGCAPGPDYQPPR-PATPEVFNSMPPQGGAKILPSAPRADWWKAFGDPQLNSLIERAVQ 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------PNLKTNST------ 117 NL++ Q RI A++ + R PS AS + RF L++ Sbjct: 81 GNLSLQQTVLRIAGARQQLDQARGAWAPS--ASGNARFSRQQLGIKGELESQGVDDRLNG 138 Query: 118 ----------------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 G D+ W++DL+G+ RR +E + A + + + A + Sbjct: 139 VGNADSLRPVLDSLEKPIGLYQGSFDASWELDLWGKVRRQVEMADARQQQSVEERNDALV 198 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ +Y+ R + +D+ + +EL+ + G + ++ A++ S Sbjct: 199 SLEAEVARAYLQLRGAQAITRTIETQIDVAQLMLELTRSQQQNGLAPQTNVENARAQLSS 258 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P + ++ ++ L G P +++ P L + +G+P++L R Sbjct: 259 LRAQLPHYQAQIHQAMNGLAVLTGKVPGALDAELTPRKA---LPLLPPAVPVGVPSELAR 315 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP 328 RPD+R E L + A IG++ + L+PSLSL+G + NS Y WS FGP Sbjct: 316 RRPDVRAAEASLHAATASIGVSVAQLFPSLSLSGQFGVR--NSDASYLDRWSSNFYSFGP 373 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF G++ S ++ A + + +++TVL A+++VENAL S D + VT L Sbjct: 374 SITLPIFQGGRLVSGVKLARAQQASAALQYRQTVLTALQDVENALVSYRSDLQQVTGLDD 433 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + + + +L+ ++YRQG S ++ LD +R A+++ A+ Q V LY A+G Sbjct: 434 SAQALQNACNLASVSYRQGLSSFIEPLDAQRQLAQLQQQAEQARVQSLLDLVALYKALGG 493 Query: 449 GY 450 G+ Sbjct: 494 GW 495 >gi|325272469|ref|ZP_08138850.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324102397|gb|EGB99862.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 471 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 135/469 (28%), Positives = 233/469 (49%), Gaps = 22/469 (4%) Query: 1 MNILRAIF-SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFN 57 MN+L+ + SL + LA C VGP+Y P P Q + + WW+ F+ Sbjct: 1 MNLLKPLTPSLLALALAACAVGPDYQAPATA--PAQLGADAQAKAYDRSHFESLWWKQFD 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYAS--ISHRFIPNL- 112 D LN+LV+ +L N + A R+ +A+ D FP +S AS I +P Sbjct: 59 DPVLNQLVQASLTGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDIGKGQVPGQT 118 Query: 113 --KTNSTG---QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + NS LD W++DLFG+ +R IE+S A +A A + ++++I++L+ +Y Sbjct: 119 EQRVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAAAAADLQQLQVSLIAELVDAYGQ 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R IA L +++ ++ G + L +V+ +A + +E+ +P L+ Sbjct: 179 LRGAQLREKIALANLKTQQQSRSITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQ 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H I+TLLG + S P + + +G P +L+R RPDIR E++LA Sbjct: 239 ARARHRIATLLGQRPDALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQLA 295 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIKSN 343 + A +G+A +DL+P +SL+G + T S G + W+ GP + FD G +++ Sbjct: 296 AATANVGVATADLFPRVSLSGFLGFTAARGSQLGSSAANAWALGPSITWAAFDLGSVRAR 355 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R A++ A+ +++ VL A++E NA + + ++ + L E +K+ L+ I Sbjct: 356 LRGAKADAEGAMANYEQQVLLALEESANAFSDYAKTQQRLLSLMRQSEASRKAAQLASIR 415 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR+G L +LD ER E + + +L + V +Y A+G G+ P Sbjct: 416 YREGTVDYLVLLDAERERLSAEDAQAQGEVELYRGIVSIYKALGGGWQP 464 >gi|265756231|ref|ZP_06090560.1| outer membrane protein oprM [Bacteroides sp. 3_1_33FAA] gi|263233822|gb|EEZ19431.1| outer membrane protein oprM [Bacteroides sp. 3_1_33FAA] Length = 457 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 29/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 14 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 72 Query: 72 NLTILQATERIN--AAKENILSVRADLFP------------SSYASISHRFIPNLKTNST 117 N + A R+ AA + I A+LFP S+Y +++ P L Sbjct: 73 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGGAYAQKEGSNYGGNNYKNDPEL----G 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G+L W++DL+G R + S+A + K++++S++ +Y + ++I Sbjct: 127 GKLTVTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNI 186 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 187 VRQTLYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA Sbjct: 247 AG----EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAY 302 Query: 297 SDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++++P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ Sbjct: 303 TNMFPRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLKAKKAAYEQE 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++VL A KE NA+ N+ K I K +M L+ + Y G LD+ Sbjct: 362 CYSYEKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++ LS A R + V LY A+G G+ Sbjct: 422 LDAQRSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 457 >gi|289209080|ref|YP_003461146.1| RND efflux system, outer membrane lipoprotein, NodT family [Thioalkalivibrio sp. K90mix] gi|288944711|gb|ADC72410.1| RND efflux system, outer membrane lipoprotein, NodT family [Thioalkalivibrio sp. K90mix] Length = 482 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 226/460 (49%), Gaps = 27/460 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLVKIAL 69 LL GC VGP+Y +P L P + L++ + +WW + D L+ LV AL Sbjct: 13 LLGGCAVGPDYERPDFDL-PEDWP---EHVLLSAEEQEAWQQWWTRYQDPQLDALVARAL 68 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLDSD---- 123 NL + +RI ++ + A+ P+ + A + P + G +D Sbjct: 69 DDNLDVRLQVQRIQESRARLGLAEANRLPTLDAQAEAARERQPEGLSPIPGGGGTDNLFS 128 Query: 124 ------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 +++DL+G+ R E++ A L + + +LNV++ ++ +Y++ R +E+++I Sbjct: 129 ITGILGYELDLWGRLARQEEAAEAFLQQSRFSHEAVRLNVVADVVATYVNLRSAQEQLAI 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + ++ ++ +EL +++ G T L L + AE+++ + IP+L + + ++ L Sbjct: 189 AEKTVESRERTLELEQIRYEGGQTDALVLRQSVAELETTRARIPSLRQQVQTLEGALAVL 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIRYQEKKLADSVAKIGI 294 +G E L + +L +P ++ +P++L+R RPDIR E +L S A+IG+ Sbjct: 249 VGMSPRELLDELDFGDRRL-ADLELPAHVPAVMPSELLRRRPDIRAAEAELMASTAEIGV 307 Query: 295 AKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++D P L+L G + A + F W G + P+FD G+ ++ + AE+ Sbjct: 308 AEADRLPRLNLMGFLGTAATETSDLFTRSAETWGVGATVAGPLFDFGRARARVETAEALR 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + T+ A +EV +AL + V ++ V+ +++ L+ I Y +G Sbjct: 368 DQAETRYAMTMTQAFREVRDALVLYEATDERVGAVRRQVQAIQETRDLAEIRYEEGFTGF 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++LD ERA E+ LS A R + L+ A+G G++ Sbjct: 428 IELLDAERALLDAELALSEALRDRLNATATLFKAMGGGWD 467 >gi|269122646|ref|YP_003310823.1| RND efflux system, outer membrane lipoprotein, NodT family [Sebaldella termitidis ATCC 33386] gi|268616524|gb|ACZ10892.1| RND efflux system, outer membrane lipoprotein, NodT family [Sebaldella termitidis ATCC 33386] Length = 492 Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 24/444 (5%) Query: 23 EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI 82 EY P+ F+ NL WW +D +L +L+ ++L N +++A R+ Sbjct: 47 EYDSPY-------FNTKTQNNLSPDALADWWNILDDDTLTQLITLSLNNNKNLMEARARV 99 Query: 83 NAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQL--DSDWKIDLFGQRR 133 N A+ + +A+L P A IS P + +L D+ W+ID+FG R Sbjct: 100 NEARAALGISQAELLPWLDSNNFWGRAKISDNITPEIGITDIYRLGIDASWEIDIFGGNR 159 Query: 134 H-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 + ++++ ++L + A + +++ S++ +Y+ R +ER++IA L L + +I+L Sbjct: 160 YKVKAAESDLLAQNALLHSTWVSISSEVAVNYLSLRTLQERLAIAESNLALQETSIKLLQ 219 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 K G T +L+L + + ++ IP ++ S ++N++ L G + ++ Sbjct: 220 SKNKAGLTDELNLNQAKYTANQTKAAIPAIKISIEEILNNLAILTGQVPGSLEKTLTERK 279 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--- 309 P++ I +GIPA+ +R RPDI+ E KL +A+ A++DL P LSL GSI Sbjct: 280 E--LPDVNEMIYVGIPAEALRQRPDIQAAEYKLESQIARTKSARTDLLPKLSLFGSIGLE 337 Query: 310 ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKE 368 +LT + G + +S P++ PIF G I+ NI +S+ +EQY+ ++ TVLNA E Sbjct: 338 SLTSGSLLSGASKGFSLLPQISFPIFHAGAIRKNIN-VQSAREEQYLAAYENTVLNAAAE 396 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 V NALT++ ++ + T L+ V ++ ++ Y G +LD +R+ ++ Sbjct: 397 VRNALTAVAQESEKNTSLKDGVSNASAALKIAQNKYNNGLTDYQSVLDAQRSLLSLQDQY 456 Query: 429 SIAKRQLAKSYVDLYIAIGSGYNP 452 +I+K Q + V L+ A+G G+ P Sbjct: 457 AISKGQKVSNLVGLFKALGGGWKP 480 >gi|330981343|gb|EGH79446.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 487 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 128/470 (27%), Positives = 221/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRAATPSDGMAKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNLKTNST 117 LV+ N T+ Q + A+ + S RA P+ S N T+++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSAS 138 Query: 118 G-------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GTRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQY 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPATTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EFDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G+N Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWN 478 >gi|78046019|ref|YP_362194.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034449|emb|CAJ22094.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 502 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 124/447 (27%), Positives = 218/447 (48%), Gaps = 33/447 (7%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWE 54 M+ LR ++F+ L+AGC VGP+Y +P +PL P Q I + + D WW+ Sbjct: 1 MSSLR-TLAVFVAASLVAGCAVGPDYARPEVPL-PDRYIGQADIAQRQAAVPADLSTWWD 58 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASIS 105 FND L++ V AL QNL + QA R+ A+ + + A L P+ +Y S+ Sbjct: 59 GFNDPDLSRYVTAALAQNLDLAQAGARVAQARAGLSAATAALLPAGNVSGSATRAYQSLE 118 Query: 106 HRF------IPNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 PN +++ L + W++DLFG RR +++LA+ + A +L Sbjct: 119 TPLGQVISSTPNFDRHASVYEANLGASWELDLFGGLRRGRQAALADYQATEAGAAATRLA 178 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V ++ YI R + R+ +A + + + + + L +G ++L L + + + Sbjct: 179 VAAQTADIYISIRGLQARLDVAQRQVATQRGLLSMVTLLHGKGLAAELQLQQAQGALAQA 238 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ +P LE ++ + +LG P H + + P + G P DL+R R Sbjct: 239 QAGVPGLEAGLVAAMNALDVMLGVP--PGTHRAELSATKPIPPAPQIADSGTPGDLLRRR 296 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLY 331 PD+ E++LA S A+IG+A ++ YP SL+G + A++ N F G S L Sbjct: 297 PDLIVAERRLAASNARIGVAMAEYYPKFSLSGLLGSATAISGANLFTGDAAQSSGVLGLR 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD G+I + I +A+ EQ ++ VL A ++VENA T++ + ++ L V+ Sbjct: 357 WRLFDFGRINAQIAQAKGQQAEQLAAYRLAVLRATEDVENAFTALIKREQQAAVLTQGVD 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIE 418 K+ S + Y +G SL+++L+ + Sbjct: 417 ALGKARGASALAYEKGTVSLIEVLNAD 443 >gi|171911892|ref|ZP_02927362.1| RND efflux system, outer membrane lipoprotein, NodT family [Verrucomicrobium spinosum DSM 4136] Length = 473 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 115/413 (27%), Positives = 205/413 (49%), Gaps = 14/413 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-- 108 KWWE F+D LN+LV ALQ + I A ++ ++ A LFP+ A S R Sbjct: 62 KWWERFHDPVLNQLVSTALQNSTDIRTAVSKVRESRARRGVQAAGLFPTVDAGFSARGER 121 Query: 109 IPNLKT------NSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 N T N +D W++DLFG QR++I+++ +L A + A++++ +++ Sbjct: 122 TDNRNTGVSSSENYGASIDMTWEVDLFGKQRQNIKAATEDLREAGENLYAAQVSLAAEVA 181 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R + ++++ + L + +++ K T + + + ++ + +P+ Sbjct: 182 DTYVSLRQAEAQLAVVERTLASRTETTQIARWKEEAKITGSVDTQQAISTLEQARAQVPS 241 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+++ + +S L P + + ++ P+ I IGIPAD +R RPDIR Sbjct: 242 LKQTISQTQNQLSLLASLPPGALDKLLAR--SDKMPSPPARIAIGIPADTLRQRPDIRAA 299 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+++ +VA+ A ++ YP LSL+GSI AL F N S L PIFD G Sbjct: 300 ERRVDAAVARTKSAVAERYPDLSLSGSIGVDALKAGRIFSPENVAASIAGSLAAPIFDAG 359 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I+ +I + I W+ TVL ++ EVENAL I + + L+ A++ +++ Sbjct: 360 RIRQDINIQSELESQALIGWEATVLTSLSEVENALIGIQRTAERLVILEQALKAARQAEE 419 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS Y G LL +L+ +R +E + A +++ LY A+G G++ Sbjct: 420 LSTQQYEAGLVDLLVVLEAQRTLLSLEDQEVTTRANQASAHIQLYKALGGGWS 472 >gi|330971257|gb|EGH71323.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 487 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 125/470 (26%), Positives = 222/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTL---KWWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRTATPSDGMGKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S RA P+ + S S Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSAS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQF 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G++ Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWD 478 >gi|212691876|ref|ZP_03300004.1| hypothetical protein BACDOR_01371 [Bacteroides dorei DSM 17855] gi|237708081|ref|ZP_04538562.1| outer membrane protein oprM [Bacteroides sp. 9_1_42FAA] gi|212665548|gb|EEB26120.1| hypothetical protein BACDOR_01371 [Bacteroides dorei DSM 17855] gi|229457909|gb|EEO63630.1| outer membrane protein oprM [Bacteroides sp. 9_1_42FAA] Length = 457 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 29/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 14 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 72 Query: 72 NLTILQATERIN--AAKENILSVRADLFP------------SSYASISHRFIPNLKTNST 117 N + A R+ AA + I A+LFP S+Y +++ P L Sbjct: 73 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGGAYAQKEGSNYGGNNYKNDPEL----G 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G+L W++DL+G R + S+A + K++++S++ +Y + ++I Sbjct: 127 GKLTVTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNI 186 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 187 VRQTLYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA Sbjct: 247 AG----EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAY 302 Query: 297 SDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++++P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ Sbjct: 303 TNMFPRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLQAKKAAYEQE 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++VL A KE NA+ N+ K I K +M L+ + Y G LD+ Sbjct: 362 CYSYEKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++ LS A R + V LY A+G G+ Sbjct: 422 LDAQRSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 457 >gi|170690255|ref|ZP_02881422.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170144690|gb|EDT12851.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 491 Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 122/464 (26%), Positives = 222/464 (47%), Gaps = 25/464 (5%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 R + L + L GC +GP Y +P + P F + +T+ WWE F D LN+L Sbjct: 8 RLLAVLVLTSLYGCLLGPNYERPKTEV-PATFRFSMEQTAETANTV-WWEQFQDPVLNEL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF-------IPNLKT 114 + AL NL + A R+ + ++ R+ LFP +++ + R +P Sbjct: 66 IAAALADNLDVKIAAARVEEFRGQFVTTRSGLFPQVGANFDASRQRASQSGAVPLPAGVG 125 Query: 115 NSTGQLDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 Q+D+ W+IDLFG+ RR E++ ANL ++ L++++ + SYI+ R Sbjct: 126 AVYNQVDASVSASWEIDLFGKIRRQSEAARANLLASEEGRRGTILSLVASVASSYINLRS 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +++ IA + ++ + L+F G S+L L + ++E ++ + +P LE + Sbjct: 186 LDKQLDIAKATVQSRADSVNVFTLRFKGGEVSQLELAQSQSEYQAARATLPQLEAQIAVQ 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ LLG + ++ I G+P+DL+ RPD+ E+ L Sbjct: 246 EDALAVLLGRNPEPIVR-----GHDLDALAAPTIPSGLPSDLLERRPDLLQAEQNLVAQN 300 Query: 290 AKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +PS+SL G S++ + F G WSF + LPIF G I+ + + Sbjct: 301 ALIGAARALYFPSISLTGLFGSLSTDFASLFSGPARIWSFAGAVSLPIFTAGNIEGQVHQ 360 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+ QE +++ + A +EV +AL ++ + + ++ V L+ + Y Sbjct: 361 AEARQQEALFAYRKAIQVAFQEVSDALINLQKSGEQLSVQGDQVNALAMYAHLARLRYEG 420 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +++LD ER+ ++ + + S+V+LY A+G G+ Sbjct: 421 GYTSYIEVLDAERSLFNAQLSYTQTQGVQLTSFVNLYKAMGGGW 464 >gi|51245973|ref|YP_065857.1| outer membrane lipoprotein [Desulfotalea psychrophila LSv54] gi|50877010|emb|CAG36850.1| related to outer membrane lipoprotein [Desulfotalea psychrophila LSv54] Length = 476 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 134/469 (28%), Positives = 232/469 (49%), Gaps = 29/469 (6%) Query: 4 LRAIFSLFIVLLA--GCTVGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLKWWESFN 57 +R +F ++LLA CT+G +Y +P L+P QF G ++ + WWE ++ Sbjct: 7 IRNLFFGGVLLLALSACTLGQDYQRPET-LVPIQFKNGAPWKEARPSDAVAKGNWWELYH 65 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISH 106 D LN L + ALQ N + A R++ + N+ R++ P + AS++ Sbjct: 66 DPVLNGLEENALQANQNLRAAYARLSQVQANLGISRSNQLPRLDLNANGGRQRTAASLTS 125 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T L +++DL+G+ RR IE+S A+++SA A L + ++L +Y Sbjct: 126 PGQDQLSTQLNLPLVLSYEVDLWGRVRRSIEASTADVESARADYQSLMLTLQAELARNYF 185 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + Q ++L + + L KF G S+L L + E+E+ ++E++ L+K Sbjct: 186 TLRAVDNETRLLQQTIELRRSTLSLVKSKFENGRVSQLDLSQAESELATVEAEAIGLKKR 245 Query: 226 FRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R + N I+ L+G PA+ F + + S P P G+P+DL+ RPD+ E+K Sbjct: 246 -RGELENLIAVLMGLPASNF--SLAQVSLRLSPPTIAP---GLPSDLLERRPDVAAAERK 299 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIK 341 +A + A+IG+AK+ +P++SL GS + + F N W GP + LPIFD G+ Sbjct: 300 MAAASARIGVAKTAFFPAISLTGSTGFASNETSSLFNWDNRTWGLGPAISLPIFDYGRNS 359 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + ++ + +E +++ VL A +EVEN L + + LQ A + +S Sbjct: 360 AKLDKSRAVYEEAIANYRQQVLVAFQEVENGLNGLQVLHEQGKALQRATTTATLAWEISE 419 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S L+++D +R+ E L + + + V L A+G + Sbjct: 420 KRYRSGLVSYLEVVDTQRSALLRERALVQLRGEQMSTSVLLIKALGGSW 468 >gi|218887249|ref|YP_002436570.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758203|gb|ACL09102.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 529 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 126/488 (25%), Positives = 229/488 (46%), Gaps = 54/488 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------------------- 50 ++ L+GC VGP+Y +P P PT++S ++ I+ D Sbjct: 14 VLALSGCAVGPDYDRPAPPAAPTEWSAAKTRPEISGDVSGSGAPAESAGSVAPRAAVSAA 73 Query: 51 ----KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 +WWE D L++LV +A+ N L A + A+ ++ V + A+ Sbjct: 74 TPDGQWWERMGDPQLSELVAMAVGHNNDALIAAANLREAR-AVVGVARGALLPAAAAGGS 132 Query: 107 RFIPNLKTNS-TGQ-----------------LDSDWKIDLFG-QRRHIESSLANLDSAYA 147 + TN+ TGQ D+ W+ID+FG RR +E++ A +A A Sbjct: 133 FERSRVSTNTLTGQSLEMARMPIESDLYQAGFDARWEIDIFGGARRGVEAARARQQAAEA 192 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + L+V ++ +Y + R + R+ +A + + ++ +EL L+ G S +++++ Sbjct: 193 GLSDVLLSVAAETARAYAELRGAQARLDVAERNAEAQRRTLELVRLRRDVGVASDMNVLQ 252 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INI 265 EA+++ E+ +P L + +H + L G P + ++ P +P + + Sbjct: 253 AEAQLQRTEALVPPLRAATDAAIHRLGVLCGLPPAALRDRLAPRA----PLPAVPDLVPV 308 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNT 322 G+P+DL+ RPDIR E +L + A IG ++DL+P SL GS L + F + Sbjct: 309 GLPSDLLLRRPDIRRVEHELHAATADIGQREADLFPKFSLTGSYGLNSIHFSDLFRDDSR 368 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ P + IF+ G+ ++ + E+ + W++TVL A +EVE +L E Sbjct: 369 AWTIMPGVRWAIFEGGRTRAAVAALEARREATLERWRKTVLVAFEEVETSLARYAEAFVE 428 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +L ++E ++ L+ + Y +G LL +LD ER +VE L+ ++ + V L Sbjct: 429 RERLSRSLEAQAEATRLAKVRYTEGVDDLLTVLDAERRQLEVEEALARSRSGVLLHLVSL 488 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 489 YKALGGGW 496 >gi|302186200|ref|ZP_07262873.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 487 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 124/470 (26%), Positives = 221/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRAATPSDGMAKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S R P+ + S S + Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRGAFLPTLDLTTGKTRSGQGTGTSNSGTSVS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQY 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPATTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G++ Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWD 478 >gi|296116876|ref|ZP_06835481.1| putative outer membrane protein oprJ [Gluconacetobacter hansenii ATCC 23769] gi|295976569|gb|EFG83342.1| putative outer membrane protein oprJ [Gluconacetobacter hansenii ATCC 23769] Length = 515 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 129/515 (25%), Positives = 237/515 (46%), Gaps = 90/515 (17%) Query: 4 LRAIFSLFIVLLA--GCTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWW 53 +RA S I LLA GC VGP+Y KP H + P Q ++ + +D +WW Sbjct: 1 MRARLSGGIALLALAGCAVGPDYHKPRNIAPHDWHQSMPPAQSAVAET----GMDA-RWW 55 Query: 54 ESFNDTSLNKLVKIALQQNLTILQAT---------ERINAAKE----------------- 87 F+D +LN L ++ NL + A RI +A + Sbjct: 56 SIFHDPTLNALEAEVVRANLDLRAAAYRFAQSMAERRIASAAQFPHAQANASYARERAST 115 Query: 88 ----NILSVRADLFPSSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RR 133 +L V + AS + F P G +++ W++D +G RR Sbjct: 116 NGVLGLLGVMEQQGAGTIASGTQGFGPTALPGRVGNPSFNLPQYGMNASWEVDFWGHVRR 175 Query: 134 HIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 +E++ A + +A D+ + ++++++ YI+ R + RI+I +D+ K +++L Sbjct: 176 QVEAATAAM---HATEDMRRDVLVSLMAETAQDYIELRGVQARIAIVEHNIDIAKHSVDL 232 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN------------ISTLLG 238 + ++ QGA ++L + ++ + ES +P L KS +++ N ++ LLG Sbjct: 233 TTQRYAQGAATRLDVADSTGQLHTFESHLPVL-KSQEIHLLNALSFLVAREPGALTALLG 291 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 PA P + + +G+P++L+ RPDIR E++L + A IG+A +D Sbjct: 292 APAA-------------IPPVPDSVPVGLPSELVDRRPDIRMAEERLHAATANIGVAVAD 338 Query: 299 LYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P ++L+GS+ AL + + FGP PIF+ G++ +R + +E Sbjct: 339 FFPRVTLSGSLDVQALQFSGLGSWASRQYGFGPTATFPIFEGGRLTGQLRLRRAQQKEAA 398 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I Q T+L A +EV++A+ + + +L AV ++ ++ + Y QG L++L Sbjct: 399 IMLQRTILKAWQEVDDAMADFSAAQGQRDRLAEAVAENQIAVDTAQAQYVQGASDFLNVL 458 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ A + +L A ++ S LY A+G G+ Sbjct: 459 TMQNALLATQSELVQATTHVSTSVARLYRALGGGW 493 >gi|104781428|ref|YP_607926.1| multidrug efflux RND outer membrane protein OprN [Pseudomonas entomophila L48] gi|95110415|emb|CAK15123.1| multidrug efflux RND outer membrane protein OprN [Pseudomonas entomophila L48] Length = 471 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 125/457 (27%), Positives = 228/457 (49%), Gaps = 33/457 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTI 75 C VGP+Y P P + G + + WW+ F+D LN+LV+ +L+ N + Sbjct: 19 CAVGPDYKTPDTA--PARLDSGLEAKAFDRSRFESVWWKQFDDPVLNQLVQASLEGNRDL 76 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTGQ-------------LD 121 A R+ AA+ ++R D+ ++ R +L K GQ LD Sbjct: 77 RVAFARLKAAR----AIREDVSNDQIPVVTSRASSDLGKGQIPGQTERRVNSERYDLGLD 132 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR--HFKERISIAH 178 W++DLFG+ +R IE+S A +A A + ++++I++L+ +Y R +E+I++A+ Sbjct: 133 MAWELDLFGRIQRQIEASEAQEAAAEADLQQLQVSLIAELVDAYGQLRGAQLREQIAVAN 192 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++I ++ L+ T G ++L +V+ +A + +E+ +P L+ + + I+TLLG Sbjct: 193 LKTQQQSRDITVT-LRDT-GVGNELDVVRADARLAGVEATVPQLQAAQVRAKNRIATLLG 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + S P + + +G P +L+R RPDIR E++LA + A +G+A +D Sbjct: 251 QRPDAMTVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATANVGVATAD 307 Query: 299 LYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+P +SL+G + T + W+ GP + FD G +++ +R A++ A Sbjct: 308 LFPRVSLSGFLGFTAARGSQIGSAASNAWALGPSITWAAFDLGSVRARLRGAKADADGAL 367 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ VL A++E NA + + ++ + L E +K+ L+ I YR+G L +L Sbjct: 368 ANYEQQVLLALEESANAFSDYGKRQQRLLALMRQSEASRKAAELASIRYREGTVDYLVLL 427 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 D ER E + + +L V +Y A+G G+ P Sbjct: 428 DAERERLSAEDAQAQGEVELYSGIVAIYKALGGGWQP 464 >gi|294669169|ref|ZP_06734250.1| outer membrane multidrug efflux protein OprB [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308913|gb|EFE50156.1| outer membrane multidrug efflux protein OprB [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 477 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 226/448 (50%), Gaps = 19/448 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GCT+ P+Y +P + + T F N+++ I +L W + F D L++L++IAL++N + Sbjct: 21 GCTMIPKYEQPQVAVSET-FKYDNAQSSIQAASLGWQDYFADPRLHRLIEIALERNTDLR 79 Query: 77 QATERINAAKENILSVRADLFPSSYASIS---HRFIPNL--------KTNSTGQLDSDWK 125 A A +E RA+LFP+ S R +L ++ S G S ++ Sbjct: 80 TAALNAEALREQYRITRANLFPTVAGKGSGTRQRTAADLAGGRAAITESYSVGLGVSAYE 139 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DLFG+ R + ++L + ++ A D L +++ + +Y + R+ +E + +A +L Sbjct: 140 LDLFGKARSNNRAALESYFNSTAARDAVHLTIVASVAKAYFNERYAEEAMKLAQNVLKTR 199 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ LS LK G S + L + EA I S ++D T K+ + +S L+ P + Sbjct: 200 EQTYRLSQLKHKAGVISAVDLRQQEALIASAQADYETAVKNREQARNALSVLINQPLPDD 259 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L S F+ + +P G+ ++++ NRPDIR E L + A IG A++ +PS++ Sbjct: 260 LPAGLPLSRQFKVS-RLPA--GLTSEVLLNRPDIRAAEHSLKQANANIGAARAAFFPSIT 316 Query: 305 LNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L GS+ + N F N W+F P + +PIF G +K+++ A+ Q Q + ++ Sbjct: 317 LTGSVGSASNELNNLFKSGNGTWAFAPSINVPIFTWGALKASLDAAKIRQQIQVVNYEAA 376 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V +AL + + +K + + + L + Y+ G S LD+LD ER++ Sbjct: 377 VQSAFRDVADALVAREQLEKAHAAKAKQSKAYTDQLRLIQLRYKHGVSSALDLLDAERSS 436 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L + ++ DLY A+G G Sbjct: 437 YAADSALLASSLTRLENMADLYKALGGG 464 >gi|301058705|ref|ZP_07199705.1| putative outer membrane efflux protein OprM [delta proteobacterium NaphS2] gi|300447190|gb|EFK10955.1| putative outer membrane efflux protein OprM [delta proteobacterium NaphS2] Length = 488 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 227/465 (48%), Gaps = 27/465 (5%) Query: 7 IFSLFIVLLAGCT-VGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 I + +L+ GC +GP++ KP + P +F K + + +WWE FND +N+L Sbjct: 10 ILAASCLLMGGCVKMGPDFKKPDSVVAAPERFQYAPRKPMATLPEDRWWEVFNDPEINRL 69 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-------FIPNLKTNS 116 V+ L+ N + QA RI + ++ RAD FPS + + + R P + Sbjct: 70 VEKVLKNNPDLEQAAARILELEYQVVQTRADRFPSLGFKAGAQRQHEPKSIVGPGISVGG 129 Query: 117 T-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T L + +++DL+G+ R E+S A L A +++S+ I Y+ + Sbjct: 130 TVDQYSFSLPASYEMDLWGKYARAEEASRAQLLQAEENRLTLSQSLVSEAISLYLQIQSL 189 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + RI I Q L Y+ ++ ++ +G TS L L + + + ++P L + Sbjct: 190 ERRIQITVQSLKNYEDSVTFVEQRYKRGLTSILDLRQARRTLNQAKGNLPQLRQELGTAQ 249 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ LLG YP T + Q ++ L I G+P++L+ RPD+R E +L Sbjct: 250 QALAVLLGEYPKTRKPY---PQPEDYYRKLRA-IPPGLPSELLLRRPDVRAAEAQLKTLN 305 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD---NSF-PGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+AK+ +PS+SL GS + N F PG WS L P+FD G++K+N R Sbjct: 306 AQIGVAKASRFPSISLTGSYGYASEELSNLFDPG--GIWSLAAGLVQPLFDAGRLKANQR 363 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE+ ++ + +++TVL A +EVENAL + + + +Q V + + ++ Y Sbjct: 364 AAEARYEQGFAAYRKTVLGAFREVENALLTRRKQLERRGDVQSFVVEARATQRVAETRYM 423 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G L +L+ ++ + E L + + + V L+ A+G G+ Sbjct: 424 RGLVDYLTVLNAQQTRFQAEDQLLRVELTILANRVTLHRALGGGW 468 >gi|21229896|ref|NP_635813.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766774|ref|YP_241536.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|21111402|gb|AAM39737.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572106|gb|AAY47516.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 490 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 129/478 (26%), Positives = 233/478 (48%), Gaps = 30/478 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESF 56 M LR + L LA C VGPEY +P PL P ++ ++ +D +WW F Sbjct: 1 MPSLRTLTVLLTASLASCAVGPEYARPDAPL-PDRYLAQDAAEQRSAAAPVDLSRWWAGF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISH- 106 D +L++ V AL QNL + QA R+ A+ + + A L PS +Y S+ Sbjct: 60 GDPALDRYVTAALAQNLDLAQAAARVTQARAGLGAANAALLPSGSINGQATRTYQSLETP 119 Query: 107 -----RFIPNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 R P+ ++ ++ W+ID+FG RR +++LA+ ++ A +L V Sbjct: 120 LGQVLRNTPDFDRYASVYDATANASWEIDVFGGLRRGRQAALADYQASAAGAAATRLAVA 179 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ +YI R + R+++A + + ++ + + L +G + L + + + + ++ Sbjct: 180 AQTADTYISIRGLQARLAVAQRQVATQQQLLAMVTLLQGKGLAADLQVHQAQGALTQAQA 239 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P LE + ++ + +LG AT H + ++ P P DL+R RPD Sbjct: 240 GVPALETALTAAMNALDVMLG--ATPGTHRAELVASTPIPTAPQVTGAASPGDLLRRRPD 297 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI----ALTHDNSFPGYNTHWSFGPKLYLP 333 + E++LA + A+IG+A ++ YP SL+G I A++ N F G + L Sbjct: 298 LIVAERRLAVANARIGVAMAEYYPKFSLSGLIGSATAISGANLFTGDAAQSAGVLGLRWR 357 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+I + I +A+ EQ ++ VL A ++VENALT++ + ++ T L V+ Sbjct: 358 LFDFGRINAQIAQAKGQEAEQLAAYRLAVLRATEDVENALTALVKREQQATVLAQGVDAL 417 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ S Y +G SL+++L+ + A + A+ + A+S V + A+G G+ Sbjct: 418 GKARGASAAAYEKGVVSLIEVLNADDALLRTSDAQLQAQTEAARSAVAAFKALGGGWE 475 >gi|146298670|ref|YP_001193261.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146153088|gb|ABQ03942.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 455 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 128/457 (28%), Positives = 228/457 (49%), Gaps = 12/457 (2%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDT 59 + IL AIF L V GC VGP+Y KP P + ++S ++ + ++ T+KW FND Sbjct: 4 LKILLAIF-LIAVFPYGCMVGPKYAKPEQPQTDSFRYSNQSADSTKSVTTIKWSSIFNDD 62 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L L++ +Q N + A R+ + N+ +ADLFP+ S S+ Sbjct: 63 VLIGLIEKGIQNNYDLKIAIARLEQVQANLGMAKADLFPAFQYSGQVNSAETFMQPSSVF 122 Query: 120 LDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++D +G+ RH +L N L S A+ + N++S + SY + R F ++ I Sbjct: 123 ANMSWELDFWGKYRHQTKALQNELLASDEAR-KVVLSNIVSTIATSYFELRDFDNQLEIT 181 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L+ +K ++ + +F G ++L V++E ++ E++IP +++ ++IS L+ Sbjct: 182 IHTLETRQKAYDIINERFISGYVAELDKVQIEQQVAIAEANIPLIKRQITALENSISILV 241 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G + + + N + + +P+ L+ NRPD++ QE + +IG+A++ Sbjct: 242 G----QVPQPIPRGKTNSELLILTEFPTSVPSALLENRPDVKRQEYLYKAAFERIGVAQA 297 Query: 298 DLYPSL---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS +L G ++T + F + + G + PIF+ GK K + A+E Sbjct: 298 LRYPSFNIGALAGFASITVGDLFNDGSYTQNVGAGVAGPIFNFGKNKRRVEVNRQIAEEM 357 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +Q+T L AI EVEN+L ++ K+ T V +K+ LS Y G S L++ Sbjct: 358 KFNFQKTYLTAISEVENSLQNVAMFKEEWTARNRQVVAAQKNYDLSNARYYNGYVSYLEV 417 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R+ + ++ LS ++ S V LY A+G G++ Sbjct: 418 LDAQRSLFEAQLSLSQLTQKQLSSMVQLYKALGGGWS 454 >gi|294776525|ref|ZP_06741999.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] gi|294449654|gb|EFG18180.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] Length = 457 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 227/452 (50%), Gaps = 21/452 (4%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 14 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 72 Query: 72 NLTILQATERIN--AAKENILSVRADLFP----SSYASI--SHRFIPNLKTN--STGQLD 121 N + A R+ AA + I A+LFP S+YA S+ N K + G+L Sbjct: 73 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGSAYAQKEGSNYGGDNYKNDPEQGGKLT 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G R + S+A + K++++S++ +Y + ++I Q Sbjct: 131 VTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNIVRQT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L G Sbjct: 191 LYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFLAG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA ++++ Sbjct: 249 --EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAYTNIF 306 Query: 301 PSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ ++ Sbjct: 307 PRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLKAKKAAYEQECYSY 365 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++VL A KE NA+ N+ K I K +M L+ + Y G LD+LD + Sbjct: 366 EKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDVLDAQ 425 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R+ ++ LS A R + V LY A+G G+ Sbjct: 426 RSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 457 >gi|150006273|ref|YP_001301017.1| outer membrane protein oprM precursor [Bacteroides vulgatus ATCC 8482] gi|149934697|gb|ABR41395.1| outer membrane protein oprM precursor [Bacteroides vulgatus ATCC 8482] Length = 460 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 227/452 (50%), Gaps = 21/452 (4%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 17 MTLLTSCQLGKHYTRPDLHL-PQQLDTLRQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 75 Query: 72 NLTILQATERIN--AAKENILSVRADLFP----SSYASI--SHRFIPNLKTN--STGQLD 121 N + A R+ AA + I A+LFP S+YA S+ N K + G+L Sbjct: 76 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGSAYAQKEGSNYGGDNYKNDPEQGGKLT 133 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G R + S+A + K++++S++ +Y + ++I Q Sbjct: 134 VTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNIVRQT 193 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L G Sbjct: 194 LYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFLAG-- 251 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA ++++ Sbjct: 252 --EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAYTNIF 309 Query: 301 PSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ ++ Sbjct: 310 PRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLKAKKAAYEQECYSY 368 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++VL A KE NA+ N+ K I K +M L+ + Y G LD+LD + Sbjct: 369 EKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDVLDAQ 428 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R+ ++ LS A R + V LY A+G G+ Sbjct: 429 RSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 460 >gi|94987437|ref|YP_595370.1| outer membrane efflux protein [Lawsonia intracellularis PHE/MN1-00] gi|94731686|emb|CAJ55049.1| outer membrane efflux protein [Lawsonia intracellularis PHE/MN1-00] Length = 459 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 117/451 (25%), Positives = 227/451 (50%), Gaps = 15/451 (3%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 V+++ C+ P+Y +PH+ L S S +++WW+ FND++L+ LV ALQ Sbjct: 11 CVIVSSCSFAPDYNRPHLELPEVWVS---SPETGVPASMQWWKRFNDSTLDILVAEALQH 67 Query: 72 NLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTNSTGQLDSDW 124 N ++ A R++ A+ + R+DLFP ++ + H+ + + ++ + + W Sbjct: 68 NRDLIAAVARVDYAQAQLGVARSDLFPHFSGNAQATPVWVDHKRVTDGQSPYSANFSASW 127 Query: 125 KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +ID++G+ R+ +++ + L + A+ + L++ ++ +Y R + SIA + + Sbjct: 128 EIDIWGKIRNAKDAAFSQLMATEAEKEGVFLSIAAQTANAYFLLRSLDLQCSIAERTVKT 187 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + + ++ +G +KL L + + E+++ + + + +S LLG Sbjct: 188 REDALSIYTAQYQKGFINKLDLTRAKTEVETARTALYQKRIAQENAETALSVLLGRSPRL 247 Query: 244 FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + ++ + + IP I GIP++L+ RPDIR E L + A IG+A++ PS Sbjct: 248 IMDTAIERGVSMKDLSCIPVIPQGIPSELLERRPDIRQAEYTLKATSANIGVARAAWLPS 307 Query: 303 LSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL G + + WS+G +PI D G++ N+ A++ +E ++ Sbjct: 308 ISLTGLFGIVSPHLSDLLKNPLKTWSYGETGTVPILDFGQVYYNVEAAQAKEREALANYE 367 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +TV NA K++ +AL E K IV L+ V+ + ++ L+ Y G S LD+LD ER Sbjct: 368 KTVQNAFKDIHDALIRQYESKNIVNSLERMVKELRIAVHLARTLYDNGYTSYLDVLDAER 427 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A + E+DL+ A S V + +A+G + Sbjct: 428 ALFQSELDLASAWSDRLSSIVQVCLALGGSW 458 >gi|224825602|ref|ZP_03698707.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224602523|gb|EEG08701.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 496 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 126/471 (26%), Positives = 225/471 (47%), Gaps = 34/471 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 L + +L GCTVGP+Y +P + L PT Q + + + D WW +F+D L V Sbjct: 12 LSVGVLTGCTVGPDYRRPEIALSPTFIGQEGVDHRQVKHKADLTIWWAAFDDPLLTHFVA 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NST-- 117 +AL QNL I QA R+ ++ ++ A L P++ SI + R +++T N+T Sbjct: 72 LALDQNLDIAQAAARVAQSRASLRYADAALLPAANVSITAARGYQSVETPLGQVLNATPG 131 Query: 118 ---------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDA 167 L++ W+ID+FG R + A +A +L V ++ Y+ Sbjct: 132 FDRSGSSYEANLNASWEIDMFGGLRRGREAARAAYEASEAGAVATRLAVAAQTADVYVTI 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + RI+IA Q ++ ++ + L++ +G ++L + + E + E+ IP LE Sbjct: 192 RGLQARIAIARQQVETRRQLFAMVRLQYGKGVAAELQMNQAEGSLTQAEAQIPVLEAGLD 251 Query: 228 MNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKK 284 ++ + LLG P T + + + P +P G PA+LIR RPD+ E++ Sbjct: 252 SAMNALDVLLGVQPGT-----YRTELASVAPVPVVPGLAETGTPAELIRRRPDLIAAERR 306 Query: 285 LADSVAKIGIAKSDLYPSLS----LNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 LA + A+IG+ S+ YP LS L + A+ N F G + L +FD G++ Sbjct: 307 LAAANARIGVVVSEYYPKLSLAALLGSATAIASGNLFTGAASQAQGVLGLRWRLFDFGRV 366 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + I A E ++ VL A ++VENA+ ++ + + V L ++ S Sbjct: 367 DAQIAAARGQEAEALAAYRLAVLRATEDVENAIEALVKREAQVGILTRGESSLARARENS 426 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y+ G SL+++LD + + + A+ + A++ + + A+G G++ Sbjct: 427 LAAYKGGVVSLIEVLDADGKLLEARDAKAQAETEAARAAIASFRALGGGWD 477 >gi|295691161|ref|YP_003594854.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295433064|gb|ADG12236.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 469 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 125/469 (26%), Positives = 223/469 (47%), Gaps = 29/469 (6%) Query: 4 LRAIFSLFIVLLAG-CTVGPEYTKPHMPLL------PTQFSIGNSKNLINIDTLKWWESF 56 LRA + L A C VGP Y P P P F+ N + WW++F Sbjct: 8 LRAALIAGVALTAAACAVGPNYRAPATPPAAFQNADPAVFTAANPEA-------AWWKAF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA----SISHRFIPNL 112 D L++LV AL NL + A R+ A+ + D+ P A + S + P L Sbjct: 61 GDPVLDQLVGQALSANLDLRIALARVAEARALFTEQKLDVLPHVTADGTYTKSKQQQPGL 120 Query: 113 KTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T+ D+ W+IDLFG+ RR +E++ A +A A + A++ V +++ +Y+ Sbjct: 121 TTDRIESQTYQAGFDARWEIDLFGRVRRGVEAAGAEAGAAQADLRDAQVTVAAEVARNYL 180 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R +ER+ +A++ L ++ + L+ ++F GA S + + +A + + E+ IP+L + Sbjct: 181 ELRGAQERLKVANRNLATQRETLRLTKVRFDAGAGSPIDVASAQARLNATEAAIPSLITA 240 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ L G + + + +P L + IG +R RPD++ E++L Sbjct: 241 ATRANYRLAVLTGQRPGALDALLVAREADTRP-LVAALPIGEAGQFLRRRPDVQAAERRL 299 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKS 342 A S A++G+A +DL+P +S+ G + S N+ WS P + P D G + Sbjct: 300 AASTAQVGVATADLFPRVSVTGFVGFLSGTSTGFGNSASQAWSVAPTVSWPALDLGSAHA 359 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +R A + + VL A++++ENAL + + + + L +++ L+ I Sbjct: 360 RLRAARARDDAALAAYDRAVLLALEDLENALVAYRQQQAQLKSLADQAAASRRAAELARI 419 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G L +LD ER E L++A+ + V +Y A+G G+ Sbjct: 420 QYREGGIDFLVLLDAERTLLAAEDALTVAETGVNTDVVAIYKALGGGWT 468 >gi|296156033|ref|ZP_06838872.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295893539|gb|EFG73318.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 547 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 126/509 (24%), Positives = 238/509 (46%), Gaps = 76/509 (14%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF----------SIGNSKNLINIDTL------KWWESF 56 +LL+ CTVGP++ P + P Q+ + ++ N+ ++ TL +WW +F Sbjct: 28 MLLSACTVGPDFHAPKADV-PDQWHDTQRSTATATGASAANVASVPTLDTDPDPRWWRNF 86 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------F 108 ND +L+ LV A + NL + +A RI A+ + S A P+ A+ S++ F Sbjct: 87 NDPTLDALVGRAARGNLDLQEAVLRIVEARTQVQSAAAQGLPNVRATGSYQREQLGVKGF 146 Query: 109 I--------------PNLKTNSTG---------------------------QLDSDWKID 127 + PN N+ D+ W++D Sbjct: 147 LESDGVYDKVDQLGAPNSPVNAVAPGAGATLQNGANNLLNQLTAPVNLWQAGFDASWELD 206 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ RR +E++ A ++A + A L++ +++ +Y+ R + +I ++D ++ Sbjct: 207 LFGRVRRSVEAANAQTEAAVESRNDALLSLEAEVAQTYMQLRGAQALHAITASLVDEQRE 266 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + L+ + G TS+L + A++ ++ +P E+ ++ ++ L+G P Sbjct: 267 IVTLTQSQAKVGLTSELDVKSATAQLAQTQAQLPQYEQQIAQALNGLAYLVGEPPGALEA 326 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + + + + +G+P+ L R RPD+R E L + A +G+A + YP +SL Sbjct: 327 ELDAPAAVP--PVPPVVPVGLPSTLARRRPDVRRAEASLHSATANVGVAVAQFYPDVSLT 384 Query: 307 GSIALTHDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 G + N+ + WS FGP + LPIF G + SN+R +++ E + +++T Sbjct: 385 GQVGTRATNA--SDLSRWSHLFYSFGPSISLPIFQGGALVSNLRLSKAQEAEAALDYRKT 442 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL A+++V+NAL D+ L +V + + L+ +YR+G S +++LD ER Sbjct: 443 VLMALRDVDNALAVYRTDQARRDSLSESVAAEQAAFDLARDSYRKGITSFINVLDAERQL 502 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A+ + Q++ V LY A+G G+ Sbjct: 503 AQARQQYAQGTMQVSTDLVSLYKALGGGW 531 >gi|186474286|ref|YP_001861628.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|186475415|ref|YP_001856885.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184191874|gb|ACC69839.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] gi|184196618|gb|ACC74582.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 496 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 124/468 (26%), Positives = 222/468 (47%), Gaps = 30/468 (6%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSL 61 +L + + + L+GC +GP+Y++P + + T +F + ++ N + WW+ F+D L Sbjct: 6 VLGPLCAFCALTLSGCLLGPDYSRPQVEVPATYRFPENYASDVANTE---WWKQFDDPVL 62 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---TG 118 N L+ AL N + A R++ ++ RA LFP A + + T+S TG Sbjct: 63 NDLITAALANNNDVKIAAARVDQFLGQFVTTRAALFPQVSAGLDAAR-ERVSTSSPLFTG 121 Query: 119 -----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 L + W+IDLFG RR E++ A+L S L ++S + SYI+ Sbjct: 122 VQNPVFNSYQLALSASWEIDLFGHNRRLTEAARASLLSTEEARRGTILTLVSSVASSYIN 181 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ IA +++ + L+F G S++ L + ++E + + IP +E Sbjct: 182 LRSLDRQLEIAKATTASRAESVHVFELRFQGGEVSQMELAQSQSEYEDSRARIPQIESQI 241 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 +S LLG + L L P + G+P++L+ RPD+R E+ L Sbjct: 242 AQQEDALSVLLGRNPGDILR------GRALGELAAPAVPAGLPSNLLERRPDLRQAEQDL 295 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A+IG AK+ +P +S+ G + F G WSF + PIF+ G I Sbjct: 296 VAANAQIGAAKALYFPQISITGLLGTQSGQFSRLFTGPARVWSFAGSVTQPIFEGGAIAG 355 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +++AE+ Q+ T+++ + A +EV++AL S + ++ V+ L+ + Sbjct: 356 QVKQAEAVQQQALYTYRKAIQVAFQEVDDALISSQKLREQFEVQGRQVQALATYAHLARL 415 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G S +++LD ER+ ++ + + + SYV LY A+G G+ Sbjct: 416 RYEGGYTSYIEVLDAERSLFNAQLSETQTQAGVLVSYVSLYKAMGGGW 463 >gi|220903590|ref|YP_002478902.1| NodT family RND efflux system outer membrane lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867889|gb|ACL48224.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 531 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 123/475 (25%), Positives = 230/475 (48%), Gaps = 29/475 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDT 59 M + A+F L + +L+ C++ P Y +P M + P Q+ ++ +N D WW FND Sbjct: 10 MRLTGAVFVLSVFMLSACSLAPRYERPEMDM-PAQWRTVDMGAAPLNTD---WWNRFNDP 65 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNL- 112 L LV AL+ N I ++ +I++A + ADL PS S A + PN Sbjct: 66 VLTALVDEALKNNQDIAESLAKIDSAASQVGIATADLLPSVSGSASSMAQGASEKTPNTM 125 Query: 113 --------KTNSTGQ--LDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLI 161 +T +T Q L + W++DL+G+ R+ + L++ L S + +L+V + Sbjct: 126 PFDKSGLSRTTATNQAALSASWELDLWGKNRNNYTMLSDVLMSTVIGHEALRLSVAGQTA 185 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY ++ A + L + + ++ QG ++L + AE++ + + T Sbjct: 186 QSYFALLALDMQLDTARRTLKTREDAFSIYSSRYKQGDITELDWQRARAEVEIARAQVHT 245 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + ++ LLG + + + Q+ P+ + + G+P+DL++ RPD+R Sbjct: 246 STVAVDRAEAGLAVLLGRSPRDIMERGMPRGQAIGMLPSPPV-LPEGLPSDLLQRRPDVR 304 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E L + A IG+A++ +PS+SL G +++ + F G WS+G +P+ D Sbjct: 305 AAEFMLMANNANIGVARAQFFPSVSLTGMLGTVSAAVGSLFTGPAGAWSYGVTGSMPLLD 364 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ N++ AE+ + +++TV A +++ +LT+ E IV +Q VE +++ Sbjct: 365 FGRTWYNVKDAEARKKASVAVYRKTVQTAFEDMRTSLTAQREADAIVRSMQIQVESLRRA 424 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + Y G L +LD ER E+ L+ A R + V + +A+G G+N Sbjct: 425 TTIARLQYDNGYTDYLTVLDAERQLFAAELQLASALRDRLDNVVSVCMALGGGWN 479 >gi|161523168|ref|YP_001586097.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189348010|ref|YP_001941206.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346721|gb|ABX19805.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189338148|dbj|BAG47216.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 502 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 130/477 (27%), Positives = 233/477 (48%), Gaps = 45/477 (9%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFN 57 A + L C +VGP+YT P PL N L++ D + WW+ ++ Sbjct: 10 ATLAPLAFALGACKSVGPDYTLPQQAYVNAPLANHALDDANG-TLVSHDAVPGNWWQLYD 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF- 108 D +LN LV+ AL N + R+ AA N+ RA L F + R Sbjct: 69 DPALNDLVRSALTSNTDL-----RVAAA--NLARSRAALEVANQQGGFSGRTEAAVQRAQ 121 Query: 109 -----------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 +P + S G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V Sbjct: 122 ESAEQYLLENKLPVVNEGSVG-INVSYEIDLFGKLRRGVEAARADSEAVQAAADLARITV 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ ++ +Y++A E + IA Q + L ++ + LS G ++ + + +++++ Sbjct: 181 VADVVRAYVEACSAGEELEIAKQSVALQRQRVALSQRLRDVGRGNQTEVTRGVTQVRTLA 240 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +DIP E ++ + ++ LL + + + + P L PI IG A L+R RP Sbjct: 241 ADIPRFESRRKIAQYQLAALLARAPADLPKAVTECAR--LPKLRRPIPIGDGAALLRRRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 D+R E++LA + A+IG+A + LYPS+S+ GS+ + D F WSFGP + Sbjct: 299 DVREAERQLAAATARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWT 357 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 G+ ++ +R AE++ + VLNA++E ++++ + D + +L+ A E Sbjct: 358 FPVNGQ-RARVREAEAATGGALAHFDGVVLNALRETQSSVAAYAADVQRADELRTAYESA 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S + YR GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 417 RSSADETHRLYRAGRESFIADLDATRTLTSVHAQVAAAEGQVAADQVRLFLALGGGW 473 >gi|225076295|ref|ZP_03719494.1| hypothetical protein NEIFLAOT_01336 [Neisseria flavescens NRL30031/H210] gi|224952419|gb|EEG33628.1| hypothetical protein NEIFLAOT_01336 [Neisseria flavescens NRL30031/H210] Length = 474 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 125/445 (28%), Positives = 214/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 25 LSACTMMPKYEQPQVAVADT-FKYDTVDDGIRAAELGWQDYFADPRLHRLIDIALERNTD 83 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLKTNSTGQLDSDWKIDL 128 + A ++ + R +L P+ AS + S G + +++DL Sbjct: 84 LRTAALNAEIYRKQYMIARNNLLPTVNASGTGSRQGSLSGGSVSSQYSVGLGAASYELDL 143 Query: 129 FGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L + A D A L +IS + +Y + R+ +E +++A ++L + Sbjct: 144 FGRVRSTSEAALQGYFNVAANRDAAHLTLISTVAKAYFNERYAEETMALAQRVLQTREAT 203 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L+ G S + L + EA I+S ++D + K+ ++++ L+ P E L Sbjct: 204 YKLSQLRHKAGVISAVDLRQQEALIESAKADYASAVKNREQARNSLAMLINQPLPEDLPA 263 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 S F+ + G+ +D++ NRPDIR E L + A IG A++ +P +SL G Sbjct: 264 GLPLSKQFK---MTKLPAGLSSDVLLNRPDIRAAEHALKQANANIGAARAAFFPRISLTG 320 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIFD G K+N+ A+ Q Q + ++ V + Sbjct: 321 SVGTASGELSGLFKSGTGIWAFAPSITLPIFDWGTNKANLDVAKLRQQAQIVAYEAAVQS 380 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A K+V NAL + + K L + S+ L + Y+ G S LD+LD ER++ Sbjct: 381 AFKDVSNALVAREQLDKSYAALSKQSRAYNDSLRLISLRYKHGVSSALDLLDAERSSYSA 440 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 441 ETALLANQLTRLENLADLYKALGGG 465 >gi|66045721|ref|YP_235562.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63256428|gb|AAY37524.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 487 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTL---KWWESFNDTSLNK 63 L +VLL+ C VGP+Y KP M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQKPSMAA-PAQFKAAQGWRTATPSDGMGKGAWWEVYKDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S RA P+ + S S Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSAS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQF 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+A++ YP +L G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 EVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G++ Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWD 478 >gi|91784639|ref|YP_559845.1| MFS efflux system, outer membrane porin [Burkholderia xenovorans LB400] gi|40019161|emb|CAE92885.1| putative outer membrane protein or channel-forming component [Pseudomonas putida] gi|91688593|gb|ABE31793.1| MFS efflux system, outer membrane porin [Burkholderia xenovorans LB400] Length = 511 Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 122/472 (25%), Positives = 229/472 (48%), Gaps = 35/472 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQ------FSIGNSKNLINIDTLKWWESFNDTSLN 62 +L + L GC VGP++ KP L Q ++ + N + WW FND L Sbjct: 17 ALCTISLVGCAVGPDFVKPDDRLAAVQLSPRADYAQAQETSAANFPS-SWWTLFNDDVLA 75 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFIPNLKT 114 L A NL + A+ERI ++ + + L PS AS H L Sbjct: 76 DLQARAQAGNLNLQMASERIEQSRAQLGIASSLLLPSVGASAGYSREAISEHGKFAALGA 135 Query: 115 NSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ D+ W++DL+G+ RR ES+ A ++ + + A++ + +++ +Y+ Sbjct: 136 PTSASDFWQLGFDASWELDLWGRARRSRESAAAAFEATVYEREAARVALSAEVARTYLQL 195 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL--EKS 225 R + ++ I Q L++ + + L+ + G ++ A++ ++E+ +P L ++ Sbjct: 196 RGTQAQLDITRQNLEVADRTLRLAESRERNGVATRFETASARAQLATVEALVPELVQRRN 255 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEK 283 MNV ++ LLG E + Q P +P N+ G+P++L RPDI+ E Sbjct: 256 TLMNV--LALLLG----EQPRALDAQLLEAMPLPSLPSNVPVGLPSELAHRRPDIQRAEA 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHW-SFGPKLYLPIFDKGKI 340 +L + A IG+AK+D YP + L G + + N +++ + S GP +YLPIF G++ Sbjct: 310 QLHAATAAIGVAKADFYPRIGLKGRVGVEAFEFNDLDSWDSRFFSVGPTVYLPIFQGGRL 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K + E+ + I +++TVL A EV+NAL + + +L + E +++++ + Sbjct: 370 KQRLALNEARQRTAAIGYRQTVLQAWHEVDNALDAWAAQQNRHAELVVSYEQNQQALHAA 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y++G L++L +R + L+ + A + V+LY ++G G++P Sbjct: 430 ERGYQEGAADYLNVLAAQRGVLASQTSLNASATNAALTLVNLYKSLGGGWDP 481 >gi|223938971|ref|ZP_03630857.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223892398|gb|EEF58873.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 1392 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 143/464 (30%), Positives = 232/464 (50%), Gaps = 32/464 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTL---KWWESFNDTSLNKLV 65 + L A VGP Y +P +P ++ +GN K +D L KWWE + D +LN+L Sbjct: 913 VALSAKAAVGPNYVRP-TNAVPQEYKAEELGNWKEGKPLDHLPKGKWWEVYEDATLNELE 971 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPN-------LKTN 115 + A N + A R+ A+ R +L PS + I RF PN + N Sbjct: 972 ENASAGNQGLKGAVARVEQARATARVARGELLPSLNFDPSFIRQRFSPNQDPSFGAITAN 1031 Query: 116 S-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S + LD ++IDL+G+ RR ES+ ++ A L + S + +Y R Sbjct: 1032 SFSVPLDLSYEIDLWGRVRRGFESARDQAAASLASYYSVLLTLQSDVAQNYFGLRSLDAE 1091 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN- 232 I+ + ++L K+ ++L H ++ G S+L + + E E+ + E++ L K R + N Sbjct: 1092 IATVARTVELRKEQVQLVHGRYEGGIGSELDMARAETELANAEAEAAGLAKR-RAELENA 1150 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G +EF H + N+ P P I G+PADL++ RPD+ E+ LA + A Sbjct: 1151 IAILVGKIPSEF-HLAAGTAPNWNPQ---PPTIPAGLPADLLQRRPDVATAERNLASANA 1206 Query: 291 KIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+AK+ +P +SL S ++ + F + WS GP + LPIF G+ K+N RR+ Sbjct: 1207 QIGVAKAAFFPVVSLTASGGYLSGDIETLFNWSSRTWSIGPSISLPIFAGGRNKANYRRS 1266 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ QE T+++ VL A +VEN+L I K AV +++ L+ YR G Sbjct: 1267 KAAYQEAIATYRQQVLVAFGDVENSLAGIYHLAKQSEAQNRAVASAQRAADLATERYRSG 1326 Query: 408 RYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGY 450 S LD++D +R E +A ++L S V L A+G G+ Sbjct: 1327 LVSYLDVVDADREALTAERARAQLAGQRLVAS-VQLIKALGGGW 1369 >gi|197295316|ref|YP_002153857.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|195944795|emb|CAR57400.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 533 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 126/522 (24%), Positives = 230/522 (44%), Gaps = 80/522 (15%) Query: 4 LRAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--------------INI 47 +R ++F ++A CTVGP+Y PH + T ++ ++ Sbjct: 1 MRRAATIFTGCAVVASCTVGPDYQPPHADVPDTWHAMRADGQAASPASDAAARSSPTVDA 60 Query: 48 DT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 D +WW +F D L++LV+ A NL + A RI A+ + + A P A+ S+ Sbjct: 61 DPDPRWWRAFGDPLLDRLVERAAHDNLDVQAAVLRIAQARAQVRAAAAQGLPDVRATASY 120 Query: 107 -------------------------------RFIPNLKTNST------------------ 117 RF P Sbjct: 121 QREQLGLKGIVEEQGIDQRVDRLGAPGSPLDRFGPGTGARVQQGARSAIDALEAPVNLWQ 180 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++DLFG+ RR +E++ A +A A D A L++ +++ +Y+ R + + ++ Sbjct: 181 AGFDASWELDLFGRVRRSVEAAGAQTSAAIASRDDALLSLEAEVAQTYLQLRGAQAQRAL 240 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + ++ ++L+ + G S L + +A + I + +P ++ + + ++ L Sbjct: 241 ADDLQRAQRELLDLTREQAAHGLASDLDVRSADARLAQIRAQLPQFDQQIVLLRNGLAYL 300 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G ++ + P++ + +G+P+ L R RPDIR E +L + A +G+A Sbjct: 301 VGGAPGALDDWLA--APRALPDVPPAVPVGLPSTLARRRPDIRRAEAELHAATADVGVAV 358 Query: 297 SDLYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAES 349 + YP +SL G + L +H HWS FGP + LPIF G++ SN+R +++ Sbjct: 359 AQFYPDISLTGQVGLRASHVREL----AHWSHLFYSFGPAISLPIFSGGQLVSNLRLSQA 414 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 E + +++ VL A+++V+NAL D+ L AV+ + ++ L+ YR+G Sbjct: 415 RQAEAALAYRQAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGALDLARDRYRKGLS 474 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD ER ++ Q V LY A+G G+ Sbjct: 475 PFLDVLDAERQWSEGRQQAQQGALQTTTDLVALYKALGGGWQ 516 >gi|170703516|ref|ZP_02894275.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170131577|gb|EDT00146.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 499 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 125/467 (26%), Positives = 229/467 (49%), Gaps = 49/467 (10%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 C +VGP+YT P PL N S+N + + WW+ ++D L+ LV+ Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANGALVSRNAVPGN---WWQLYDDPVLDALVRS 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF----------- 108 AL+ N + R+ AA N+ RA L F S + R Sbjct: 79 ALKSNTDL-----RVAAA--NLARSRAALEVANEQGGFSGSAEAAVQRAQESAEQYLLEN 131 Query: 109 -IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + + G + +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++ Sbjct: 132 KLPVVNEGAVG-ISVSYELDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVE 190 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E Sbjct: 191 SCSAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEGRR 250 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + ++ LL + + + P L PI IG A L+R RPD+R E++LA Sbjct: 251 KIAQYQLAALLARSPADLPKAVAECER--LPKLRQPIPIGDGAALLRRRPDVREAERQLA 308 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ Sbjct: 309 AATARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RAR 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE++ + VLNA++E +++L + D + L+ A E + S + Sbjct: 367 VREAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRL 426 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 427 YAAGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVKLFLALGGGW 473 >gi|116748519|ref|YP_845206.1| RND efflux system outer membrane lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116697583|gb|ABK16771.1| RND efflux system, outer membrane lipoprotein, NodT family [Syntrophobacter fumaroxidans MPOB] Length = 496 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/453 (26%), Positives = 220/453 (48%), Gaps = 27/453 (5%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GCT+GP+Y +P + ++P+ +F +++ N D WW+ F D L+ L+ AL N + Sbjct: 15 GCTLGPDYRRPAVDVMPSYRFEERETRDTANTD---WWKEFQDPVLDSLIAEALANNRNV 71 Query: 76 LQATERINAAKENILSVRADLFPS-SYASISHR-------------FIPNLKTNSTGQLD 121 A I+ A ++ RA LFP SY+ + R F+ N + + Sbjct: 72 RIAAANIDQAAGVLMQTRAPLFPQVSYSGSATRRRASERGSDVLSGFVSNPRNSFELLAG 131 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++W+IDL+G+ RR E++ ANL ++ L++++ + +YI R +++ I+ + Sbjct: 132 ANWEIDLWGRIRRLSEAARANLLASEEARRGVVLSLVASVAGTYIQLRGLDDQLEISRRT 191 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L +Y +++ L L+F G S++++ + ++ ++ + IP +E + +STLLG Sbjct: 192 LAVYGESLRLFELQFAHGQVSQMTVEQARSQYETAAATIPQIESQIAQTENGLSTLLGRN 251 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 K P I G+P+ L+ RPD+ E+ L + A+IG AK+ + Sbjct: 252 PGPVDR--GKSIRELTPPA---IPSGLPSQLLERRPDLAQAEQNLIAANAQIGAAKALYF 306 Query: 301 PSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P++SL ++ + F G WS+ PIF G I +++AE+ + + Sbjct: 307 PAISLTAALGTQSSELSDLFKGPARTWSYAGSFTGPIFTAGAIAGQVKQAEAMQKAALES 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +Q +LNA +VE+AL + + + + + V K+ L+ + Y G L +L Sbjct: 367 YQNAILNAFSDVESALVARRKLSEQLEAQEALVRTLKEYDRLAWLQYNGGYTPYLTVLTA 426 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E E+ S + L +YV++Y +G G+ Sbjct: 427 ETQLFPAELTTSEVRTALMAAYVNIYKVMGGGW 459 >gi|148556611|ref|YP_001264193.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148501801|gb|ABQ70055.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 485 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 121/470 (25%), Positives = 218/470 (46%), Gaps = 26/470 (5%) Query: 4 LRAIFSLF-IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 LR LF + L C VGP+Y P + ++ + D ++WW + D L Sbjct: 9 LRLAVVLFSCISLTACVVGPDYHAPPSVDTGSGWTQAAAGASAPADLVRWWSTLGDPELE 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR-----------FI 109 +LV AL QNL I QA RI+ A+ P S+ AS++ R I Sbjct: 69 RLVDTALAQNLDIRQAAARIDEARALRDRAAGQQLPAVSAGASVNRRRQSENGPLPVGSI 128 Query: 110 PNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 P L + T D+ W++DLFG RR +E + A L + A+ ++ + +++ ++ Sbjct: 129 PGLDASQTIYDAGFDAAWEVDLFGANRRALEGASARLQATQAEAQGVRMRIAAEVARTWF 188 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +A E + + ++ ++L + G S+ + + + +P + Sbjct: 189 EATGAGEELLTQQATVATLQQTLDLMRSRAALGDVSRADVDAAYERWAAANAMLPGIAAR 248 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 R V + LLG P L + + P +P + +G AD++R RPD+ E++ Sbjct: 249 QRGAVLGLGVLLGAPPERELKLL----DTAAPARVLPALPVGERADILRRRPDVLAAERR 304 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA S A IG+A ++L+P LS+ G AL+ + F +T +S P + +FD G+++ Sbjct: 305 LAASTADIGVATAELFPKLSIGAGGGFQALSPGDWFDSSSTRYSILPLISWRLFDGGRVR 364 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + IR E++ ++ + +++ VL A+ + E L N +T+ Q A++ ++S + Sbjct: 365 AEIRVREAAQRQAALGYEQAVLAALGDAERTLGDYNASLDTLTRHQAALDASRRSFDHAE 424 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + +++L +R + E A+ A V LY AIG G+N Sbjct: 425 ARFAAGDITRIELLAAQRLLHEAETANLRARTTAAVQMVALYKAIGGGWN 474 >gi|319638633|ref|ZP_07993395.1| MtrE protein [Neisseria mucosa C102] gi|317400382|gb|EFV81041.1| MtrE protein [Neisseria mucosa C102] Length = 474 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 125/445 (28%), Positives = 214/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 25 LSACTMMPKYEQPQVAVADT-FKYDTVDDGIRAAELGWQDYFADPRLHRLIDIALERNTD 83 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLKTNSTGQLDSDWKIDL 128 + A ++ + R +L P+ AS + S G + +++DL Sbjct: 84 LRTAALNAEIYRKQYMIARNNLLPTVNASGTGSRQGSLSGGSVSSQYSVGLGAASYELDL 143 Query: 129 FGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L + A D A L +IS + +Y + R+ +E +++A ++L + Sbjct: 144 FGRVRSTSEAALQGYFNVAANRDAAHLTLISTVAKAYFNERYAEETMALAQRVLQTREAT 203 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L+ G S + L + EA I+S ++D + K+ ++++ L+ P E L Sbjct: 204 YKLSQLRHKAGVISAVDLHQQEALIESAKADYASAVKNREQARNSLAMLINQPLPEDLPA 263 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 + F+ + G+ +DL+ NRPDIR E L + A IG A++ +P +SL G Sbjct: 264 GLPLNKQFK---MTKLPAGLSSDLLLNRPDIRAAEHALKQANANIGAARAAFFPRISLTG 320 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIFD G K+N+ A+ Q Q + ++ V + Sbjct: 321 SVGTASGELSGLFKSGTGIWAFAPSITLPIFDWGTNKANLDVAKLRQQAQIVAYEAAVQS 380 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A K+V NAL + + K L + S+ L + Y+ G S LD+LD ER++ Sbjct: 381 AFKDVSNALVAREQLDKSYAALSKQSRAYNDSLRLISLRYKHGVSSALDLLDAERSSYGA 440 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 441 ETALLANQLTRLENLADLYKALGGG 465 >gi|197123995|ref|YP_002135946.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter sp. K] gi|196173844|gb|ACG74817.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter sp. K] Length = 483 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/452 (27%), Positives = 228/452 (50%), Gaps = 17/452 (3%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNK 63 + SL LA C VGP Y +P +P P + D WW +F+D L Sbjct: 11 VTSLASFALAACAVGPRYVRPELPERPAWAAAAPGTRAAGADEALLASWWSAFDDPLLAS 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQ--- 119 LV+ A NL +LQA R+ A+ + A+L PS AS S R P+ ++ G Sbjct: 71 LVERAATSNLGLLQARARVREARARRGAAVAELAPSVTASTSASRSWPSEQSGGGGAADL 130 Query: 120 ----LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LD+ W++DLFG +RR E++ A+ ++A ++++++++ SY+ R + R+ Sbjct: 131 FQAGLDASWELDLFGGKRRASEAAAASAEAALEDARDVRVSLVAEVGLSYLGLRTTEARL 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A + L ++ +L+ + G T++L + + A ++ + +P LE++ + + ++ Sbjct: 191 AVARRNLAALQETADLTRWRAEAGLTTQLDVEQARASLEQQRAAVPQLERTAASDRNALA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + ++ P + + +G+PAD +R RPD+R E++LA A++G+ Sbjct: 251 VLLGLQPGALDAELA--ASRPVPAVSREVALGVPADALRRRPDVRRAERELAAQTAQVGV 308 Query: 295 AKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PSL+L+GSI AL + G S G L PIFD G++ + + Sbjct: 309 AQAARFPSLTLSGSIGLEALAAGDLVAGNAVTSSLGAGLLAPIFDAGRLARAVEVQAAVL 368 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E + ++ VL A++EVE+AL + + ++ L A ++ +L+ Y+ G + Sbjct: 369 DESLLAYRAAVLTALQEVEDALYAFDREQARRAALAEAEGAASQAAALARDQYQAGLVAF 428 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 +LD ER V+ L+ + ++A V L+ Sbjct: 429 TAVLDAERTLLGVQDSLAASDGEVASDLVRLF 460 >gi|326385330|ref|ZP_08206975.1| putative outer membrane protein oprJ [Novosphingobium nitrogenifigens DSM 19370] gi|326210136|gb|EGD60908.1| putative outer membrane protein oprJ [Novosphingobium nitrogenifigens DSM 19370] Length = 527 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 134/501 (26%), Positives = 232/501 (46%), Gaps = 60/501 (11%) Query: 4 LRAIFS--LFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFN 57 LR + S L + +L GCTVGP Y P P Q+ +S T +WWE + Sbjct: 11 LRRLLSATLSLAVLGGCTVGPNYHHTVQPA-PAQWHESLPAADSHVTTQPITARWWELYG 69 Query: 58 DTSLNKLVKIALQQNLTILQATERINA--AKENILSVRADLFP-----SSYASISHRFIP 110 D L L + + NL + A+ R++ A+ NI RA P +SYA R P Sbjct: 70 DPELTSLEEQVVAGNLDLRIASSRLDQSLAERNI--ARAARLPHVDGAASYA--RERASP 125 Query: 111 N-----LKTN---STGQLDSD----------------------------WKIDLFGQ-RR 133 N L T STG + S W++DL+G RR Sbjct: 126 NGVMSLLGTGVNQSTGTIASGQQGFGPAAASGSSGSSDFDLPQYGVSASWEVDLWGHVRR 185 Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 IE + A L +A Q ++++++ YI R + +I++ Q LD K+ ++L+ L Sbjct: 186 QIEVANATLQAAQDQRRDILVSLMAETASDYIALRSVQAQIALTGQNLDTAKRLVDLTRL 245 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + +GA+++ ++ E+ +P L ++ +S L+G + K Sbjct: 246 REREGASARFETAAANGQMHDFEARLPALRSQEAHLLNALSFLVGREPGALTAELGK--V 303 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---A 310 P + + +G+P+ L RPD+R E+KL + A IG+A S+ +P L+L+GS+ A Sbjct: 304 KAVPPVPKDLPVGLPSQLAERRPDVRMAEEKLHAATASIGVAISEFFPRLTLSGSLDIQA 363 Query: 311 LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 L N + + FGP + LP+F+ GK+K +R + +E I Q T+L A +E++ Sbjct: 364 LQFGNLGTWASRQYGFGPTMTLPLFEGGKLKGQVRLRRAEQREAAIALQRTMLKAWQEID 423 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 +A+ ++ + +L VE ++ ++ ++ Y G L +L ++ E+ L+ Sbjct: 424 DAMADLSAAQTRRGRLADEVEANRVALDMAQRQYEAGSGDFLRVLTMQATLQTNEITLTE 483 Query: 431 AKRQLAKSYVDLYIAIGSGYN 451 A +A + LY A+G G++ Sbjct: 484 AGADIASASTRLYRALGGGWD 504 >gi|284800004|ref|ZP_05985449.2| multiple transferable resistance system protein MtrE [Neisseria subflava NJ9703] gi|284796353|gb|EFC51700.1| multiple transferable resistance system protein MtrE [Neisseria subflava NJ9703] Length = 474 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 25 LSACTMMPKYEQPQVAVADT-FKYDTVDDGIRAAELGWQDYFADPRLHRLIDIALERNTD 83 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLKTNSTGQLDSDWKIDL 128 + A ++ + R +L P+ AS + S G + +++DL Sbjct: 84 LRTAALNAEIYRKQYMIARNNLLPTVNASGTGSRQGSLSGGSVSSQYSVGLGAASYELDL 143 Query: 129 FGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L + A D A L +IS + +Y + R+ +E +++A ++L + Sbjct: 144 FGRVRSTSEAALQGYFNVAANRDAAHLTLISTVAKAYFNERYAEETMALAQRVLQTREAT 203 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L+ G S + L + EA I+S ++D + K+ ++++ L+ P E L Sbjct: 204 YKLSQLRHKAGVISAVDLRQQEALIESAKADYASAVKNREQARNSLAMLINQPLPEDLPA 263 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 S F+ + G+ +D++ NRPDIR E L + A IG A++ +P +SL G Sbjct: 264 GLPLSKQFK---MTKLPAGLSSDVLLNRPDIRAAEHALRQANANIGAARAAFFPRISLTG 320 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIFD G K+N+ A+ Q Q + ++ V + Sbjct: 321 SVGTASGELSGLFKSGTGIWAFAPSITLPIFDWGTNKANLDVAKLRQQAQIVAYEAAVQS 380 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A K+V NAL + + K L + S+ L + Y+ G S LD+LD ER+ Sbjct: 381 AFKDVSNALVAREQLDKSYDALSKQSRAYNDSLRLISLRYKHGVSSALDLLDAERSNYSA 440 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 441 ETALLANQLTRLENLADLYKALGGG 465 >gi|121595243|ref|YP_987139.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120607323|gb|ABM43063.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 511 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 121/470 (25%), Positives = 229/470 (48%), Gaps = 31/470 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSI------GNSKNLINIDTLKWWESFNDTSLN 62 +L + L GC VGP++ KP L Q S N + N + WW FND L Sbjct: 17 ALCTISLVGCAVGPDFVKPDDRLATVQLSPRADYAQPNETSAANFPS-SWWTLFNDPVLA 75 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASIS-HRFIPNLKT 114 L A NL + A+ERI ++ + + L PS S +IS H L Sbjct: 76 GLQSRAQAGNLNLQIASERIEQSRAQLGIASSLLLPSVGVSAGYSREAISEHGKFAALGA 135 Query: 115 NSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ ++ W++DL+G+ RR E + A ++ + + A++ + +++ +Y+ Sbjct: 136 PTSASDFWQLGFEASWELDLWGRARRSREGAAAAFEATVYEREAARVALSAEVARAYLQL 195 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + ++ I Q L++ + + L+ + G ++ A++ ++E+ +P L + Sbjct: 196 RGAQAQLDITRQNLEVADRTLRLAESRERNGVATRFETSSARAQLATVEALVPELVQRRN 255 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKL 285 ++ ++ LLG E + Q P +P N+ G+P++L RPDI+ E +L Sbjct: 256 TLMNALALLLG----EEPRALDAQLLEAMPLPSLPSNVPVGLPSELAHRRPDIQRAEAQL 311 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHW-SFGPKLYLPIFDKGKIKS 342 + A IG+AK+D YP + L G + + N +++ + S GP +YLPIF G++K Sbjct: 312 HAATAAIGVAKADFYPRIGLRGRVGVEAFEFNDLDSWDSRFFSVGPTVYLPIFQGGRLKQ 371 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + E+ + I +++TVL A EV+NAL + + +L+ + E +K+++ + Sbjct: 372 RVALNEARQRTAAIAYRQTVLQAWHEVDNALDAWAAQQNRHAELRVSYEQNKQALHAAER 431 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y++G L++L +R + L+ + A + V+LY ++G G++P Sbjct: 432 GYQEGAADYLNVLAAQRGVLASQTSLNASATNAALTLVNLYKSLGGGWDP 481 >gi|115360753|ref|YP_777890.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115286081|gb|ABI91556.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 499 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 125/467 (26%), Positives = 231/467 (49%), Gaps = 49/467 (10%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 C +VGP+YT P PL N S+N + + WW+ ++D L+ LV+ Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANGALVSRNAVPGN---WWQLYDDPVLDALVRS 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF----------- 108 AL+ N + R+ AA N+ RA L F S + R Sbjct: 79 ALKSNTDL-----RVAAA--NLARSRAALEVANEQGGFSGSAEAAVQRAQESAEQYLLEN 131 Query: 109 -IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + + G ++ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++ Sbjct: 132 KLPVVNEGTVG-INVSYELDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVE 190 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E Sbjct: 191 SCSAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEGRR 250 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + ++ LL + + + P L PI IG A L+R RPD+R E++LA Sbjct: 251 KIAQYQLAALLARSPADLPKAVAECER--LPKLRQPIPIGDGAALLRRRPDVREAERQLA 308 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+A + LYPS+S+ GS+ + D P N WSFGP + G+ ++ Sbjct: 309 AATARIGVATAALYPSISIGASAGSVGVAADLFSPTTN-RWSFGPLISWSFPVNGQ-RAR 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE++ + VLNA++E +++L + D + L+ A E + S + Sbjct: 367 VREAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRL 426 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 427 FVAGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVKLFLALGGGW 473 >gi|222102783|ref|YP_002539822.1| nodulation protein T precursor [Agrobacterium vitis S4] gi|221739384|gb|ACM40117.1| nodulation protein T precursor [Agrobacterium vitis S4] Length = 490 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 125/469 (26%), Positives = 234/469 (49%), Gaps = 41/469 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLN 62 SL +V L+ C V + + L ++ G++ L++ WW +FND +L+ Sbjct: 21 LSLIVVPLSAC-VAVTQSNVDISKLANRWHATLPHSGSTAQLVD-----WWNTFNDPALS 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SY------ASISHRFIPN 111 +L++ A + T+ A I A+ + S +AD FPS SY S ++R P+ Sbjct: 75 ELLRTAEANSPTLESAVAEIEEARATLASSKADYFPSLTGSGSYDRSGTRGSKANRVAPS 134 Query: 112 LKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T TG+LD+ W++D FG+ R+ +E++ + A A++ + +++ Y+ + Sbjct: 135 --TTGTGELDASWELDFFGKTRNTVEAARQRVAEETADWYDARVTLAAEVADDYVQYKGC 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAE-----IKSIESDIPTLE 223 ++ I L ++ ++ + + G ++S L+L+K A +KS +D L Sbjct: 193 RQLQGIYAAELVSQQQTVKATEVSTASGLKSSSDLALIKASAASTSSSLKSQVADCEVLI 252 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 KS I+ L+ + + K S+ + ++ IPA++IR RPD+ EK Sbjct: 253 KS-------ITELVAVDEDKVRDILNKSSSKIPRPAKLSVD-AIPANVIRQRPDVNALEK 304 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A S+A + AK+DLYPS SL+G++ +H S G + WSFGP + +PIFD G +++ Sbjct: 305 EAAASLADVATAKADLYPSFSLSGTLTASHSTS-SGTSLPWSFGPAVSIPIFDGGSLRAT 363 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ E++ + +++ VL AI VE A+ +++ ++ + A + ++ N Sbjct: 364 VKYKEAAYKAAIASYKSGVLTAINAVETAMVNVDSTERQIGDAVVAAKNYRAYFKAIDTN 423 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ G S+LD D R E+ L +R + ++ LY A+G G+ P Sbjct: 424 WKAGGASVLDREDARRELQAAELTLVENQRDAVRDWIALYKAMGGGWTP 472 >gi|221212236|ref|ZP_03585214.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221168321|gb|EEE00790.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 501 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 230/465 (49%), Gaps = 45/465 (9%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+YT P PL N L++ D + WW+ ++D +LN LV+ AL Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANG-TLVSHDAVPGNWWQLYDDPALNDLVRSAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 N + R+ AA N+ RA L F + R + Sbjct: 81 TSNTDL-----RVAAA--NLARSRAALEVANQQGGFSGRTEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + S G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGSVG-INVSYEIDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E + IA Q + L ++ + LS G ++ + + +++++ +DIP E ++ Sbjct: 193 SAGEELEIAKQSVALQRQRVALSQRLRDVGRGNQTEVTRGVTQVRTLAADIPRFESRRKI 252 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LL + + + + P L PI IG A L+R RPD+R E++LA + Sbjct: 253 AQYQLAALLARAPADLPKAVTECAR--LPKLRRPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWTFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + +L+ A E + S + YR Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLAAYAADVQRADELRTAYESARSSADETHRLYR 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 429 AGRESFIADLDATRTLTSVHAQVAAAEGQVAADQVRLFLALGGGW 473 >gi|119386161|ref|YP_917216.1| RND efflux system outer membrane lipoprotein [Paracoccus denitrificans PD1222] gi|119376756|gb|ABL71520.1| RND efflux system, outer membrane lipoprotein, NodT family [Paracoccus denitrificans PD1222] Length = 458 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 129/437 (29%), Positives = 234/437 (53%), Gaps = 16/437 (3%) Query: 20 VGPEY-TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQA 78 VGP+ +P +P+ P F G + + + + +W + D LN L+ L+QNL A Sbjct: 22 VGPDPDARPAIPV-PATFVEGEAASAGKLASRAFWAEYRDPVLNDLIARGLKQNLDEAAA 80 Query: 79 TERINAAKENI--LSVRADLFPSSYASISHRFIPN---LKTNSTGQLDSDWKIDLFG-QR 132 ERI AA ++ V A + ++ R ++T L +++ DLFG R Sbjct: 81 RERIRAAAADLRGTGVLAGQVSGTASAARERGASAGGAVQTAGNSSLGANFVFDLFGGAR 140 Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 R + + A+L+SA A + A+L I++LI +Y DAR++++ +++ + + ++ + ++ Sbjct: 141 RERQGAAASLESAKAGLGTARLAWIAELIDAYGDARYYRQALALTRKTVSTREETVRITR 200 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 + G S+ + + EA + + ++IP + + V I+TLL PA+ M++ S Sbjct: 201 DQREFGVVSEFDMAQAEALLAAARAEIPGYQAQYDAQVFAIATLLNEPASSVQAQMRRGS 260 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 QP + G+PADL+RNRPD+R E LA ++A +G+A +DL PSLSL GS+ Sbjct: 261 G--QPRIPGSARAGVPADLLRNRPDLRSAEYDLAAALATVGVATADLLPSLSLTGSV--- 315 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 S G W FGP + P+ ++G +++ R + A+E I W+ V A+++V+ A Sbjct: 316 ---SESGGAKSWGFGPAISFPVLNQGALQATRARRIAEAREAEIAWRAAVSQAVEDVQVA 372 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 +++ ++ L+ A + ++ L+ ++ +G +LLD+LD +R+TA + + A+ Sbjct: 373 QSNLRRYREQAAALEGAAAAYDRAYQLARTSFAEGELALLDLLDSDRSTASARLSAASAR 432 Query: 433 RQLAKSYVDLYIAIGSG 449 Q AK + L IA G+G Sbjct: 433 NQAAKEWAALQIATGAG 449 >gi|302343075|ref|YP_003807604.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301639688|gb|ADK85010.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 500 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 123/451 (27%), Positives = 227/451 (50%), Gaps = 24/451 (5%) Query: 20 VGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 VGP++ P + P ++S + ++ N+D WW +F+D L L++ A+ N + Sbjct: 32 VGPDFQPPQVET-PAKWSAEQAAKPQSDQNVDLTAWWRAFDDPLLESLIQRAVAANPDLK 90 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-------------LDSD 123 A R+ A A L PS AS S+ + +T+S GQ D+ Sbjct: 91 LAEARVRQAMAQRGVSLAALGPSLDASGSYSRGQS-RTSSGGQYAGSNIGDQYVAGFDAS 149 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++D+FG RR +ES+ A + + + + +++ +Y+ R ++RI +A L Sbjct: 150 WELDIFGGARRGLESADAQIRANVEDRRDVLVTLTAEVASNYLALRTTQQRIDVAQNNLA 209 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ +++ ++ G + L + +A++ S + IP LE + R +HNI+ LLG P Sbjct: 210 AQQRTAQITIKRYQAGFANGLESAQAQAQVASTAAQIPALEATARQTMHNIAILLGQPPA 269 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + + + P+ + PADL+R RPDIR E ++ + A IG+A ++L+P Sbjct: 270 ALVAELSAAAPAPLTPPTPPLGL--PADLLRRRPDIRRAEAEIHVATANIGVATAELFPK 327 Query: 303 LSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +++ GS + + F N WSFGP + +F G+ K+ I + ++ I ++ Sbjct: 328 INIIGSSGYSASQAASWFTPANLIWSFGPSVSWNLFGSGRTKAQIEVQKMLEEQAVIAYR 387 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +TVL A++EVE+AL ++ + L AV+ ++K+++LS+ Y QG L +L+ +R Sbjct: 388 QTVLTAMREVEDALIVSGKEVQRRALLAQAVQANQKAVALSLELYTQGHGDFLSVLEAQR 447 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L+ + A V LY A+G G+ Sbjct: 448 SLYSAQDSLAQSAGGAATDMVALYKALGGGW 478 >gi|301058945|ref|ZP_07199914.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] gi|300446941|gb|EFK10737.1| efflux transporter, outer membrane factor lipoprotein, NodT family [delta proteobacterium NaphS2] Length = 496 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 120/483 (24%), Positives = 234/483 (48%), Gaps = 45/483 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNK 63 L +V L GC +GP+YT+P + P + G+ I + +WW+ ++D L+ Sbjct: 13 LLLVSLGGCALGPDYTRPDVAAPDSWDDWHSGDDALHAKIGSGPLHTEWWKDYHDPVLDD 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------ 117 LV AL + I A R A+ + + FP A+ S + L + T Sbjct: 73 LVARALGASPDIETAALRFVQARIQMQVTSSRQFPELKATGSATY-NRLSEHGTATRLYD 131 Query: 118 -------------------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 G LD W+ID +G R++E++ A A +++ Sbjct: 132 EIGDEIGFDKDIVVDILSDPFAWYQGGLDFSWEIDFWGHVARNVEAAGAGAAEQAAMLEV 191 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L+VI L+ +Y R + +I ++ + + + ++ + + + + G + + +A Sbjct: 192 ARLSVIGDLVNAYWSLRRVQRQIQLSREDIRVVEERLAIQQAQASGGLINHGEIADQKAG 251 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPAT--EFLHYMQKQSNNFQPNLYIPINIGIP 268 + +I++ +P L+ +++ I L+G +P + L ++S+ Q + +N+G+P Sbjct: 252 LAAIQAGLPALQAGESRDMNRILLLVGEHPGALQDLLKARGRESDKVQEDNLPALNMGLP 311 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WS 325 + + RPD+R E +L + AKIG+A+++LYP ++L S+ L F + + WS Sbjct: 312 STVALRRPDVRAAEARLHQATAKIGVARAELYPGITLGASLGLDSYQGKDFVDWGSRVWS 371 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LP+F+ G++K+ + E + QE I + +TVL A E+++ L+ ++ + K Sbjct: 372 IGPSLSLPLFNHGRLKNTVLLREKAQQEAAIAFHQTVLGAWHEIDDGLSRYEAARQALIK 431 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q + +++ +L +R G S L +LD R + E DL+ ++ L ++ + +A Sbjct: 432 QQKRMHNAREACTLLNARFRGGNGSYLSVLDGRRNVLRAERDLAESRENLCTAFAAVNMA 491 Query: 446 IGS 448 IG+ Sbjct: 492 IGN 494 >gi|332308345|ref|YP_004436196.1| RND efflux system, outer membrane lipoprotein, NodT family [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175674|gb|AEE24928.1| RND efflux system, outer membrane lipoprotein, NodT family [Glaciecola agarilytica 4H-3-7+YE-5] Length = 460 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/471 (26%), Positives = 222/471 (47%), Gaps = 40/471 (8%) Query: 2 NILR-AIFSLFIVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLKWWESF 56 NIL+ + I LA C VGP+Y P ++ L T ++ L N WW +F Sbjct: 3 NILKIGTLAGLISALAACAVGPDYQAPTKANNIELAST---YEQAEKLTN-----WWHAF 54 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 D LN+L+ AL++N T+ QA + A DL P + + N+ Sbjct: 55 GDEDLNQLIDQALKENRTLFQAQANVLRAYAIFRDSDNDLLPKGSLNAGYEAGKNITL-- 112 Query: 117 TGQLDSD---------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 L+SD W +DLFG+ RR IE+SLA + A A+L +IS++ Sbjct: 113 ---LESDDDTIARGYNAGANLTWDVDLFGKVRRAIEASLAEAEQADILWHDAQLQIISQV 169 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y D R + R+ +A Q L ++ + +F G S+L + +++A++ +E+ +P Sbjct: 170 AATYGDYRGAQFRLKVAEQNLANLRQTRTIVKARFQAGFASELEMARIDAQVFQVEASVP 229 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + +S LL E + + P L P+ + + +R R D+ Sbjct: 230 QMRNLLARADATLSALLAKKPGELALSTEPEL----PQLSKPVALVPGENYLRYRADVAS 285 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKG 338 E+ LA S A+IG+A +DLYP++S++G + + G WS P + D G Sbjct: 286 SERALAASTARIGVATADLYPNVSVSGFLGFLSGPGLTLGGDTKSWSVAPTISWQAADLG 345 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 IK+ IR+AE+++ +++ V +A+ +++ +L S N ++ +H + +++M+ Sbjct: 346 SIKARIRQAEANSDIALAQFEQQVFDALADMQFSLQSYNFSRQQQQSTEHQWQASERAMT 405 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + G L++L+ +R + L++ ++Q VD+Y A G G Sbjct: 406 LARQRFEAGSGEFLELLEAQRDALQSREQLAVQEQQSFNRLVDIYRAFGGG 456 >gi|170721627|ref|YP_001749315.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169759630|gb|ACA72946.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 471 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/453 (27%), Positives = 227/453 (50%), Gaps = 25/453 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTI 75 C VGP+Y P P + + + + WW+ F+D LN+LV+ +L N + Sbjct: 19 CAVGPDYKAPDTE--PARLASDVQAKAFDRSRFESVWWKQFDDPVLNQLVQASLDGNRDL 76 Query: 76 LQATERINAAKENILSVRADLFP--SSYAS--ISHRFIP---NLKTNSTG---QLDSDWK 125 A R+ +A+ D P +S AS I +P + + NS LD W+ Sbjct: 77 RVAFARLKSARAIRDDAANDQLPVVTSRASSEIGKGQVPGQTDQRVNSERYDLGLDMAWE 136 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR--HFKERISIAHQILD 182 +DLFG+ +R IE+S A +A A + ++++I++L+ +Y R +E+I++A+ L Sbjct: 137 LDLFGRIQRQIEASDAQAAAAQADLQQLQVSLIAELVDAYGQLRGAQLREKIAVAN--LK 194 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +++ ++ G ++L +V+ +A + +E+ +P L+ H I+TLLG Sbjct: 195 TQQESRSITVTLRDAGVGNELDVVRADARLAGVEATVPQLQAEQARARHRIATLLGQRPD 254 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + S P + + +G P +L+R RPDIR E++LA + A +G+A +DL+P Sbjct: 255 ALSVDL---SPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATANVGVATADLFPR 311 Query: 303 LSLNGSIALTH-DNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL+G + T S G + W GP + FD G +++ +R A++ A+ ++ Sbjct: 312 VSLSGFLGFTAARGSQIGSSAANAWGLGPSITWAAFDLGSVRARLRGAKADAEGALANYE 371 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + VL A++E NA + ++ ++ + L + +K+ L+ + YR+G L +LD ER Sbjct: 372 QQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAADLASVRYREGTVDYLVLLDAER 431 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E + + L + V +Y A+G G+ P Sbjct: 432 ERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQP 464 >gi|307725976|ref|YP_003909189.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586501|gb|ADN59898.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 486 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 121/481 (25%), Positives = 231/481 (48%), Gaps = 42/481 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMP--------LLP--TQFSIGNSKNLINIDTLK-- 51 ++A+ + + L+GC VGP++ P P LP T S G + DT + Sbjct: 1 MKALLVVCAIALSGCAVGPDFKAPGAPDTQTYTPNALPERTVSSDGPNGASQTFDTARGV 60 Query: 52 ---WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSYASISHR 107 WW F +LN+LV AL QN T+ QA R+ A++N ++ FP A++S Sbjct: 61 MPMWWHEFKSDALNRLVDEALHQNPTLAQARARLIQAQQNYTALAGTTQFPGIDATLSGA 120 Query: 108 ---------FIPNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 IP++++ + + D+FG RR +E+S+A +D ++D A Sbjct: 121 RQKVDPAAFGIPHVESAGPFSLFGASVSVSYVFDIFGGNRRALEASMAQVDYESYELDAA 180 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L++ ++ + + +E+I++ ++ D + + ++ +F G S+L + + Sbjct: 181 RLSIAGNIVSTAVQRASLREQIALTERLADAQAQQLSITEARFAAGGVSQLDVRSQRTLL 240 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATE--FLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +P L H ++ LLG ++ F H ++ Q L+IP+ + P+ Sbjct: 241 AQTRALLPPLATQLAAADHQLAILLGRAPSQADFEHLT---FDSLQLPLHIPLTL--PSA 295 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFG 327 L R RPDI+ E L ++ A +G+A ++LYP +L+ I + G N W+ G Sbjct: 296 LARARPDIKAAEALLHEASANVGVATANLYPQFALSAGIGSQRTRVGDIVNGLNI-WNVG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L PIF G++ + R AE++ + +++ VL A+++V ++L+++ D + + Sbjct: 355 LNLTQPIFHGGELHAKKRAAEAAHDGAFANYRQVVLQALQQVADSLSAVQNDARELQART 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + + S++++ Y G S L +LD ER + + +D + A+ L+ A+G Sbjct: 415 EAAQEAQASLNVATERYAAGGISQLALLDAERQSLQTTLDRTRAQANRFSDTAALFQALG 474 Query: 448 S 448 S Sbjct: 475 S 475 >gi|325525698|gb|EGD03454.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 505 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 51/483 (10%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKLVK 66 +LAGCTVGP+Y P P PT F + + +D +WW + ND L++L+ Sbjct: 26 CVLAGCTVGPDYRGAPAAPDAPT-FVRAPA---VGVDAGAPAPSEWWRALNDRQLDELIV 81 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------------------- 105 AL N + A R+ A+ + RA P S A+++ Sbjct: 82 AALAFNPDMHAAQARLREARAQLTQQRAAQLPKSSATVAAIRMREPDISALGSLLPSSSS 141 Query: 106 ----HRFIPNLKTNSTGQL-------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 P +G L D+ W+IDLFG RR +E++ A ++ A + + Sbjct: 142 GQSGTSGSPASSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQ 201 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +++ +++ +Y+D R ++R++++ + L ++ +EL+ + +G + + +L +++ Sbjct: 202 VSLAAEVATAYVDLRDQQQRLALSQRTAALQQRMLELTQQRRARGVAADADIERLTTQVE 261 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + + L+ ++ ++ L G A L +N P L + IG PA L++ Sbjct: 262 NTRASLIPLDAQVTESLDRLAILTGR-APGALDAELSSANAPLPTLPATVPIGDPAALLK 320 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGP 328 RPDIR E++LA S A+IG +D +P ++L G + + + PG+ N W P Sbjct: 321 QRPDIRSAERRLAASNAQIGEHIADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWIGAP 378 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L I D G+ + +R AE+S E +++ VL A+++ AL ++ V L Sbjct: 379 YLQWNILDFGRTRGAVRAAEASRDEAEANYRKAVLGALQDANTALQRYGHQREHVVALTK 438 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S SL YR G S++D+LD +R + ++ + +L K YV L ++G Sbjct: 439 VQASATHSASLMDERYRAGVASMIDLLDTQREALSAQQNVIAGQAELLKDYVSLQKSLGL 498 Query: 449 GYN 451 G+ Sbjct: 499 GWQ 501 >gi|270158445|ref|ZP_06187102.1| NodT family efflux transporter [Legionella longbeachae D-4968] gi|289166717|ref|YP_003456855.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269990470|gb|EEZ96724.1| NodT family efflux transporter [Legionella longbeachae D-4968] gi|288859890|emb|CBJ13876.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 517 Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 122/472 (25%), Positives = 225/472 (47%), Gaps = 36/472 (7%) Query: 7 IFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 IF+L I ++L+ C VGP Y +P P+ S WW+ F+D L L+ Sbjct: 4 IFTLAISLMLSACMVGPNYKEPIKPVAAHWPQKNASVKETPFKDTNWWQVFHDPVLTSLI 63 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-------------RFIPNL 112 NLT+ R+ + + +L+P A++S P Sbjct: 64 YQGYHNNLTLQATGVRVLQTRALLAQSVGELYPQQQAAVSSFNYYKIGGSELQTVLPPTF 123 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T S G ++W+ID +G+ RR I+++ A S+ A D A + + + + +YI+ R ++ Sbjct: 124 ETLSLG-FSANWEIDFWGKYRRAIQANDAVFLSSLAAYDNALVTLTADVATTYINIRMYE 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +I + Q + + ++ + ++ ++ G T+ + + + + E+ E+ +P LE S + Sbjct: 183 TKIKVTKQNIVVQREGLNIARARYNAGQTNLIDVEQAQTELSQTEASLPPLESSLEQQKN 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLA 286 ++ LLG + ++K IPI +GIP + + RPDI + Sbjct: 243 ALALLLGTVPNGVDNQLRKSRG-------IPIAPSTVAVGIPKETLARRPDIYEARLEAV 295 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--------NTHWSFGPKLYLPIFDKG 338 AKIG K++L+PSL+LNG+ + + +N P N + + GP L PI + G Sbjct: 296 SESAKIGEIKANLFPSLALNGTFSFSSNNIGPNSLSDLFQPSNRNITAGPSLTWPILNYG 355 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I + +R +++ Q+ + + VL A +EV+N++T+ E KK L A K++ Sbjct: 356 QITNAVRAQDAAYQQSLLRYVNLVLKAQQEVQNSITAYIEAKKAERALTTANIAAVKTLK 415 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++I Y +G +L+ E+ V+ L A+ + + V LY A+G G+ Sbjct: 416 LAIIRYMEGETDFTPVLNAEQQQLSVQTSLVSAQANIPAALVSLYRALGGGW 467 >gi|85860352|ref|YP_462554.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] gi|85723443|gb|ABC78386.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] Length = 503 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 135/474 (28%), Positives = 239/474 (50%), Gaps = 40/474 (8%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTL-KWWESFNDT 59 RA+ L ++L+GC TVGP+YT P L T G + +L KWW + ND Sbjct: 18 RALM-LAALILSGCATVGPDYTPPATELSKSWHTPLKSGLTAEETGPASLEKWWTNLNDP 76 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L+ L+ A+ N + +A R+ A+ + RA LFP+ S S + + G Sbjct: 77 ELSSLMTRAIAGNRDLRKARARVRQARASRGVTRAGLFPTLDVSSSATRSRSSEETGGGT 136 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 LD+ W++DLFG RR +E++ A+L ++ + A +++++++ +Y++ R + Sbjct: 137 TSSFYVAGLDAGWELDLFGGVRRSVEAAEADLQASQEDLRDALVSLLAEVALNYVEVRKY 196 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ +++A L ++ EL+ + G + +L++ + ++ S IPTL Sbjct: 197 QDLLTVAESNLATQQETFELTRWRQQAGLSDELAVQQARYNLERTRSQIPTLRTGLEEAK 256 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +N++ LLG P T LH ++ P + G+PAD++ RPD+R E++LA Sbjct: 257 NNLAVLLGEQPGT--LHGELEERKPV-PVANPAVAAGVPADVLLQRPDVRRAERELAAQT 313 Query: 290 AKIGIAKSDLYPSLSLNGSIAL-----------THDNSFPGYNTHWSFGPKLYLPIFDKG 338 A+IG+A ++LYP +L+GSI L + G W IFD Sbjct: 314 ARIGVATAELYPKFTLSGSIGLEAFSSSNLFSSGSRTAGGGAGVTWR--------IFDAR 365 Query: 339 KIKSNIRRAESSAQEQYITWQET-VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 I+ NI +++ QEQ +T ET VLNA+KEVENALT+ E+++ L AV +++ Sbjct: 366 AIRQNIE-VQTALQEQALTGYETAVLNALKEVENALTAYAEEEQRRQALSEAVSAAQQAA 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y+ G +L+ +R+ ++ +L+ + + + + LY A+G G+ Sbjct: 425 RQAGYKYQSGLADFDSVLEAQRSLLILQEELAQSNGAVLSNLIRLYKALGGGWT 478 >gi|299069037|emb|CBJ40286.1| putative outer membrane chanel lipoprotein [Ralstonia solanacearum CMR15] Length = 524 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 118/471 (25%), Positives = 213/471 (45%), Gaps = 43/471 (9%) Query: 18 CTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C VGP+Y P + + P + + + +WWE F+D +L +L++ A + T+ Sbjct: 33 CAVGPDYRAPRLAGVEAPAGWHATLPHHGSRMMLARWWEQFHDPALTQLIEQADVDSPTL 92 Query: 76 LQATERINAAKENILSVRADLFPS---------------------------SYASISHRF 108 QA R+ A+ ++ S RA LFP S S+S Sbjct: 93 AQAVGRVREARASVSSSRAALFPQLKGSGSAVRQGGFGGSQVLGGAGGTGVSATSVSPTL 152 Query: 109 IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 T D W++DLFG +RR +E + A LD++ A A++ + +++ +Y+ Sbjct: 153 GLGTFTTLAATADVSWELDLFGGKRRSLEGADARLDASLADWHDARVTLSAEVASTYLQQ 212 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + ++I L ++ ++L+ KF G + L + +A + + + + Sbjct: 213 RECEALVAIGETTLASRQETLQLTERKFGAGFVAPADLAQAQATVADATNALESQRAQCA 272 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + TL G + + P+ +P +PA ++ RPD+ E+ + Sbjct: 273 QGLDRLVTLTGLDHAALAALLASGTGRMPAPPDAAVPD---VPAQVLSQRPDVSSAERAV 329 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYN---THWSFGPKLYLPIFDKGKI 340 A + A IG+A + PSL+L GSI + N+F G + WSFGP + LP+FD G Sbjct: 330 AGASADIGVAVASRLPSLTLAGSIGI---NTFRISGQSLTSKSWSFGPSVSLPLFDGGSG 386 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + A + + ++ V A +EVE+AL ++ + + A + K + + Sbjct: 387 AARVETARARYDQALAAYRAKVRQAAQEVEDALVRLDAAGRRLDAAAVADAQYAKVLQAA 446 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G SLL + D+ RAT L+ + + A+++V LY A+G G+ Sbjct: 447 SARYRLGAGSLLQLEDVRRATLSASQSLAAVRLERAQAWVALYKAVGGGWR 497 >gi|312961194|ref|ZP_07775699.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] gi|311284852|gb|EFQ63428.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] Length = 471 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 132/470 (28%), Positives = 228/470 (48%), Gaps = 41/470 (8%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKL 64 SL ++ L+ C VGP+Y K P + ++K D K WW+ F+D +LN+L Sbjct: 9 SLLVLALSACAVGPDY-KTQTPEAANITAAADAKQ---YDHAKFEGIWWQQFDDPTLNQL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----- 119 V +LQ N + A R+ AA+ D P+ + +S K GQ Sbjct: 65 VTQSLQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRVSS---DQGKGQVPGQTSRRI 121 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR-- 168 LD W++DLFG+ +R++E++ A+ +A A + ++ +I++L+ +Y R Sbjct: 122 KTERYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQLRGA 181 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFT---QGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +ERI+ LD K E + + G +L + + +A + ++E+ +P L+ Sbjct: 182 QLRERIA-----LDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAE 236 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + I+TLLG + + S P + + IG P L++ RPDI E+KL Sbjct: 237 QVRERNRIATLLGQRPDKLSVGL---SPKDLPAIAKALPIGDPGQLLQRRPDILSAERKL 293 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 A + A+IG+AK+DL+P +SL+G + T WS GP + FD G +++ Sbjct: 294 AAATARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSAAANAWSLGPSITWAAFDLGSVRA 353 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +R A++ A T+++ VL A++E ENA + + ++ + L E + + L+ I Sbjct: 354 RLRGADAEADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAI 413 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR+G L +LD +R E + A+ L + V +Y A+G G+ P Sbjct: 414 RYREGTVDFLVLLDAQRERLAAEDTQAQAEVDLYRGIVAIYKALGGGWQP 463 >gi|302038615|ref|YP_003798937.1| efflux transporter outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] gi|300606679|emb|CBK43012.1| Efflux transporter, outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] Length = 506 Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 126/487 (25%), Positives = 226/487 (46%), Gaps = 48/487 (9%) Query: 6 AIFSLFIVL---LAGCTVGPEYTKPHMP-------LLPTQFSIGNSKNLINIDTLKWWES 55 AI ++ ++L +GC GP Y +P + + + G ++ + D WW++ Sbjct: 11 AISTVLVMLSLSASGCLQGPNYHRPPVDTPADWTRMASGPLAAGATETMPEAD---WWQA 67 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASI--SHRF 108 F++ L + V+ AL QN + +A R+ + ++ + A L+P SY++I S Sbjct: 68 FHNQELTQFVERALAQNHDVRRAVSRVLEGRASVTTAGAGLYPQLNVQGSYSNIVVSKNT 127 Query: 109 IPNL--------------KTNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQ 148 + L K S+ G D W++D++G+ RR +E++ A+ + Sbjct: 128 LAGLGLATGQQPGPQVFAKPGSSFDLWNGAADLRWELDVWGRIRRGMEAASADAQAIEQD 187 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 L ++ + SY R E+I IA + L L + ++++ + + G S L + + Sbjct: 188 ARAIALTLVGDVGQSYFRIRELDEQIEIAQRALTLRRDSLDIITKRASVGLASDLDVKRT 247 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGI 267 E + IP L + + +H + L G P + L + QP I +G+ Sbjct: 248 EVLVAESAGQIPDLTRLRAVELHRLEVLTGSAPGSVVLAPTSLRKVIVQPE----IPVGL 303 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHW 324 P+ L+ RPDI E L + A+IG A++ +P+LS+ G L N F G + ++ Sbjct: 304 PSQLLERRPDILQAEASLVAANARIGQARAYFFPTLSITGQGGLQSAEFVNWFSGNSANF 363 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S GP + LPIF G + + AES Q+ +Q+T+L A +EV + L SI + + Sbjct: 364 SIGPSVTLPIFLGGTNVARLEAAESRYQQMLEGYQQTILLAFREVADLLVSIQSRSEQLA 423 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + + ++ L+ + YR+G + LD+LD +R E L+ +R V LY Sbjct: 424 RQREQATAATAAVGLAEVRYRKGLVNYLDVLDAQRTMLAAETQLAQTERARLTDMVGLYK 483 Query: 445 AIGSGYN 451 A+G G+ Sbjct: 484 ALGGGWQ 490 >gi|221199116|ref|ZP_03572161.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221205374|ref|ZP_03578390.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221175165|gb|EEE07596.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221181567|gb|EEE13969.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 501 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 129/465 (27%), Positives = 230/465 (49%), Gaps = 45/465 (9%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+YT P PL N L++ D + WW+ ++D +LN LV+ AL Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANG-TLVSHDAVPGNWWQLYDDPALNDLVRSAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 N + R+ AA N+ RA L F + R + Sbjct: 81 TSNTDL-----RVAAA--NLARSRAALEVANQQGGFSGRTEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + S G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGSVG-INVSYEIDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E + IA Q + L ++ + LS G ++ + + +++++ +DIP E ++ Sbjct: 193 SAGEELEIAKQSVALQRQRVALSQRLRDVGRGNQTEVTRGVTQVRTLAADIPRFESRRKI 252 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LL + + + + P L PI IG A L+R RPD+R E++LA + Sbjct: 253 AQYQLAALLARAPADLPKAVTECAR--LPKLRRPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWTFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + +L+ A E + S + YR Sbjct: 369 EAEAATGGALAHFDGVVLNALREPQSSLAAYAADVQRADELRTAYESARSSADETHRLYR 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 429 AGRESFIADLDATRTLTSVHAQVAAAEGQVAADQVRLFLALGGGW 473 >gi|146307206|ref|YP_001187671.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina ymp] gi|145575407|gb|ABP84939.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas mendocina ymp] Length = 462 Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 126/459 (27%), Positives = 228/459 (49%), Gaps = 20/459 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-TLKWWESFNDTSLNKLVKI 67 +L + L+ C VGP+Y P P + + + + WW+ F+D +LN+LV+ Sbjct: 7 ALLTLALSACAVGPDYRAPVTE--PARIAALEAADYDRSRFEAAWWQQFDDPTLNQLVQR 64 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----IPNLKTNSTGQ---- 119 +LQ N + A R+ AA+ V D P+ + S F P + Q Sbjct: 65 SLQDNRELRVAFNRLRAARAIRDDVANDRLPTVTSRASGEFGKAQQPPVSEERIRQERYD 124 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 LD W++DLFG+ +R +E+S A ++ A A ++++I++L+ +Y R + R SI Sbjct: 125 LGLDMAWELDLFGRIQRQLEASEARIEVAEADYYQLQVSLIAELVDAYGTLRGAQLRESI 184 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + + ++ G ++L +++ +A + + E+ +P L+ + I+TL Sbjct: 185 ARENLKNQQDSRGITEQLRDAGVGNELDVLRADARLAATEASLPQLQAQQVRAQNRIATL 244 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + + S P + + IG P++L+R RPDI+ E++LA + A++G+A Sbjct: 245 LGQRPEQLQIDL---SPKPLPVIAKALPIGNPSELLRRRPDIQAAERQLAAATAEVGVAT 301 Query: 297 SDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +DL+P +SL+G + T S G + W P + FD G +++ +R AE+ A Sbjct: 302 ADLFPRVSLSGFLGFTAGRGSQLGSSAARAWGVAPSISWAAFDLGSVRARLRGAEAEADG 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ VL A++E ENA + + ++ + L E + + + I YR+G L Sbjct: 362 ALSQYEQQVLLALEESENAFSDYAKRQQRLVSLVRQAEASRAAADQAAIRYREGTVDFLV 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LD ER E + A+ +L V +Y A+G G+ P Sbjct: 422 LLDAERERLAAEDAQAAAEVELYSGIVAIYKALGGGWQP 460 >gi|170699453|ref|ZP_02890497.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170135653|gb|EDT03937.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 495 Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 226/476 (47%), Gaps = 40/476 (8%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGCTVGP+Y P P PT + S + WW + +D L++L+ AL Sbjct: 19 CLLAGCTVGPDYRGAPAAPDAPTFVRAPATSVDPTAPAPSAWWHALDDRQLDELIAAALA 78 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKT--------NST--- 117 N + A R+ A++ + RA P S A+++ P++ NST Sbjct: 79 HNPDLQAAQARLRASRAQLSQQRAAQLPKSSATVAAIRTREPDVSALGSLLPSGNSTQSG 138 Query: 118 ----------------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 D+ W++DLFG RR +E++ A ++ A + ++++ +++ Sbjct: 139 GSSPSLGGSGPLQLYSAGFDATWEVDLFGGTRRAVEAASAQAEAVDADLADTQVSIAAEV 198 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+D R ++R++++ + +L ++ +EL+ + +G + + + +L ++++ + + Sbjct: 199 ATAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRARGVAADVDIERLTTQVENTRASLI 258 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L+ ++ ++ L G A L S P L + + +G PA L++ RPDIR Sbjct: 259 PLDAQVTESLDRLAILTGR-APGALDAALSASAAPLPTLPVSVPVGDPAALLKQRPDIRA 317 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIF 335 E++LA S A+IG +D +P ++L G + + + PG+ N W P L I Sbjct: 318 AERRLASSNAQIGEHIADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQWNIL 375 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + +R AE+S E +++ VL A+++ AL ++ V L Sbjct: 376 DFGRTRGAVRAAEASRDEAEANYRKAVLGALQDANTALQRYGHQREHVVALTKVQTSATH 435 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S +D+LD +R + ++ K +L K YV L ++G G+ Sbjct: 436 SATLMDQRYRAGVASTIDLLDTQREALAAQQNVIAGKAELIKDYVSLQKSLGLGWQ 491 >gi|218891325|ref|YP_002440192.1| outer membrane channel protein [Pseudomonas aeruginosa LESB58] gi|218771551|emb|CAW27319.1| outer membrane channel protein [Pseudomonas aeruginosa LESB58] Length = 502 Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 119/487 (24%), Positives = 228/487 (46%), Gaps = 41/487 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK---------NLINIDTLKW 52 +LR + L + + CTVGP+Y +P + P ++ +S + W Sbjct: 17 GVLRGLVLLLSLSSSACTVGPDY-QPPQSVSPQRWGDWHSGPEALRSTQHEGERLRDQAW 75 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------S 100 W+ F D L+ L A+Q N + A R A+ V + P S Sbjct: 76 WKVFGDPVLDDLQARAIQANPELHGAILRFAQARMQRRIVSSAYLPEVTLEGGVSRQKQS 135 Query: 101 YASISHRFIPNLKTNSTGQL---------------DSDWKIDLFGQ-RRHIESSLANLDS 144 +++R + + + L D+ W+ DL+G+ R +E++ A + Sbjct: 136 LYGMNNRLLEATEPGNREALEKALGDPFTLYQAGFDASWEPDLWGRVGRSVEAARAEIGM 195 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A A +D L++ S++ SYI+ R + +I + + + + ++ + L ++ +G T +L Sbjct: 196 AAAALDDTLLSISSEVARSYIEVRTAQRQIRLLEEDIRMLEERLRLVRVRAGEGLTDELY 255 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 + + +AE++++ +P + S + I+ LLG ++ + N Sbjct: 256 VERQKAELEALRGRLPAWQASETEATNRIAVLLGERPGALARALEAKPGNVLERALPDFR 315 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNT 322 +G+P++L+R RPDIR E+ L + A IGIAK+ LYPS++L D F + + Sbjct: 316 LGVPSELVRQRPDIRAAEQSLHRATADIGIAKAALYPSIALGARFGYESYRDGKFGEWGS 375 Query: 323 H-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 WS GP L LP+FD G+ ++ +R E QE +T+Q TVL A +EV++AL+ + + + Sbjct: 376 RAWSIGPTLDLPLFDAGRRRTVVRLRELEQQEAAVTFQRTVLGAWQEVDDALSRYHAEYQ 435 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 ++ +++ + + Y QG+ L+ +D +R + + + +L ++ L + Sbjct: 436 RNLHMRDKAASSRQAYEWTQVKYAQGQVDFLEEIDAQRTSMQAQRELIDSEALLRTQLIA 495 Query: 442 LYIAIGS 448 LY +G Sbjct: 496 LYKTLGG 502 >gi|73539464|ref|YP_299831.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72122801|gb|AAZ64987.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 481 Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 38/474 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 L ++AGC VGP+Y P +PL Q + + + + WWE F D L +LV Sbjct: 11 LSAAVVAGCAVGPDYHAPDVPLSERYLGQPQVEQRRAASTAELVNWWEGFGDPQLTRLVS 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---------SYASIS------------ 105 +AL QNL + QAT R+ A+ + + A L PS SY SI Sbjct: 71 VALDQNLDLAQATARVAQARAGLGAATAALLPSAGVSAQAARSYQSIETPLGRLQSATQG 130 Query: 106 -HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 R+ N + N L + W++D+FG RR E++LA+ ++ A +L V ++ Sbjct: 131 FDRYGNNYEAN----LGASWELDVFGGLRRGREAALADYRASEAGAMATRLAVAAQTADL 186 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + R++IA + + +K + L + +G ++L + + E + +++ IP LE Sbjct: 187 YITVRGLQARLAIATRQAETQQKLVSTVGLLYGKGLAAELEVRQAEGALAEVQATIPVLE 246 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQK-QSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + +LG P + +Q Q P + G PADL+R RPD+ E Sbjct: 247 AGLDAALNALDVMLGVPPGTYRAELQGVQDIPAAPEI---TGSGSPADLLRRRPDLVVAE 303 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 ++LA + A+IG+A ++ YP SL + + N F + + L +FD G Sbjct: 304 RRLAAANARIGVAIAEYYPKFSLGALLGSATTVASGNLFSAGASQAAGVAGLRWRLFDFG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I + I +A+ E +++ VL+A ++VENA +++ + + L ++ Sbjct: 364 RINAQIEQAQGQEAESLAAYRQAVLHATEDVENAFSALVKRENQAQTLARGEASLSQARD 423 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y++G L+++L + + + A+ + A++ V + A+G G+ P Sbjct: 424 ASFAAYQKGVVRLIEVLHADERLLQTSDARAQARTESARAAVAAFKALGGGWQP 477 >gi|325280866|ref|YP_004253408.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] gi|324312675|gb|ADY33228.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] Length = 451 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 233/456 (51%), Gaps = 16/456 (3%) Query: 3 ILRAIFSLFIVLL----AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +++ I++L IVLL + C +G Y++P + L P Q G + ++ ++W + + D Sbjct: 1 MMKKIYTLAIVLLVLGVSSCKLGKHYSRPELRL-PEQIE-GTVPDSVSAGDIRWTDLYTD 58 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNS- 116 L +L++ L+ N ++ A ++ + E +ADLFP + A++S R N+ Sbjct: 59 PVLRQLIRKTLEGNKDLMIAAAKVKESMELRRIAKADLFPKAEATVSAEREYDETPGNTF 118 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G++ + W++DL+G+ R +++LA + + +++++ +Y + + ++ Sbjct: 119 EGKVLASWEVDLWGKLRWAGQAALAEYLQSVEGRQALQSALVAQVAQAYFELIALDQELA 178 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I Q L ++ + L+ L+F G TS+ L + + E+ ++ +P LE+ R+ + I+ Sbjct: 179 IVRQTLAARQEGVRLAKLRFEGGLTSENPLRQAQVELARTQTLVPGLEREIRLKENQITL 238 Query: 236 LLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G YP + + + Q L + +G+ + ++ RPDIR E +L + AK+G+ Sbjct: 239 LAGEYPGE-----VARGKSIGQQQLMTALPVGLSSRILERRPDIRQAEYRLKAAHAKVGV 293 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQE 353 A + ++P +L G L + + F G +L P+F+ GK ++ ++ + + ++ Sbjct: 294 AYTSMFPKFTLTGHYDLESSDLTDFLKAPYFFVGGELLAPVFNLGKNRARLKASRAVQEQ 353 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +Q+ VL A EV NAL + + ++I +H + + ++ L+ + Y G S LD Sbjct: 354 ETYNYQKVVLQAFTEVSNALVNSRKSREIRESREHLEQSARSNLDLATLQYINGVISYLD 413 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R ++ L+ A R + V LY +G G Sbjct: 414 VLDAQRGYFDAQIGLNTAIRDELLATVQLYQVLGGG 449 >gi|218887252|ref|YP_002436573.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758206|gb|ACL09105.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 489 Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 125/457 (27%), Positives = 229/457 (50%), Gaps = 31/457 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC+ GP++ +P M L P + G + D WW+ F D +L+ LV AL N + Sbjct: 13 GCSFGPDHARPAMDL-PDAWRPGTADTGTVQD--GWWKGFGDPALDALVASALDHNRDLA 69 Query: 77 QATERINAAKENILSVRADLFP---SSYASISHRF-------------IPNLKTNSTGQL 120 +A ++ A+ + RA+ P + AS R+ + +L N+ G L Sbjct: 70 KAIANVDEARAQLGLARANQMPRVDAQGASQRQRYSLEGFNSFDESTRVQDLH-NAGGVL 128 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DL+G+ RR E++ A+L S A D +L + +++ +Y D R + +++ +A Sbjct: 129 S--YEMDLWGRYRRASEAARADLLSTMAARDTVRLALTAQVARTYFDLRAYDQQLQVARD 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L + EL ++F G TS+L + AE + S + TL+ + + + L G Sbjct: 187 TLASRESTQELRKVRFELGLTSELDYRQAIAEAAAARSTVHTLQYNVSASEAALGVLTGK 246 Query: 240 PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + ++ P + G+P+ L+ RPDI E++LA + A IG+AK+ Sbjct: 247 SPRDIVTGTVERGLAVDAVPVPPSVPAGLPSALLERRPDIVQAEQQLAAASANIGVAKAA 306 Query: 299 LYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +PS+SL G L +++S F G W + + +PIFD G+IK+ + AE+ + Sbjct: 307 YFPSISLTG--LLGYESSDLTRLFTGPAGTWRYAGSVSMPIFDFGRIKAGVEAAEARQRA 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ V +A +E ++AL + + + +V V ++S+ L+ + Y G S L+ Sbjct: 365 ALAGYEKAVQDAFREAQDALVANRKARGVVEAQTTQVTALRRSLHLAKLRYDNGYSSYLE 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER+ VE+ L+ A+R + V++Y A+G G+ Sbjct: 425 VLDAERSLFDVEISLASAQRDQLVAVVEVYRALGGGW 461 >gi|296156856|ref|ZP_06839693.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295892742|gb|EFG72523.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 484 Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 129/470 (27%), Positives = 223/470 (47%), Gaps = 34/470 (7%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSL 61 + R + ++ AGCTVGP Y +P + P+ F + +++ ++WW F+D L Sbjct: 5 LFRLLPAMCACWFAGCTVGPNYQRPAVDT-PSSFRYASPDAEVVDQGVVQWWSQFDDPVL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTG 118 + L++ AL QN + A R++ +++ RA LFP +++A R +P T Sbjct: 64 DSLIERALVQNRDLAIAAARVDEFYGRLMTTRAGLFPQIGANFAGSRSRGVPAPGFAPTV 123 Query: 119 ----QLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 QLD + W+IDLFG+ RR E++ A+ A ++ +I+ + SY+ R Sbjct: 124 GNQVQLDVMASWEIDLFGRLRRMTEAARADYLGTQAVQQATRIALIASVATSYLLLRDLD 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +R+ IA L + L +F G S+L + + ++E +S ++ + ++ + Sbjct: 184 QRLDIAKSTLASRADALALFQERFGGGVVSQLQVSQAKSEYESAQASVYAFQQQIAQQEN 243 Query: 232 NISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +S LLG P + L + + I G+P+ L+ RPDI E+ L Sbjct: 244 ALSLLLGDNPGPIPRGKPLTQLSAPT----------IPAGLPSSLLERRPDILQAEQALV 293 Query: 287 DSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG A++ +P++SL G S AL+ + G WSF + PIF G I Sbjct: 294 SANASIGAARAQYFPTISLTGVFGAASTALS--GLWTGPARVWSFAGAIAQPIFTGGAIT 351 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++R AE+ QE +++T+ +A +VENAL + + + VE + SL+ Sbjct: 352 GSVRIAEAQQQEALFGYEQTIQSAFADVENALVGVARVRDQLQATNRQVEALAQYASLAR 411 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S L++LD ER+ ++ S + V LY A+G G+ Sbjct: 412 DLYEGGYTSYLEVLDAERSLFAAQLQQSQLQDLELAQIVALYKALGYGWT 461 >gi|256839349|ref|ZP_05544858.1| outer membrane efflux protein oprM [Parabacteroides sp. D13] gi|256738279|gb|EEU51604.1| outer membrane efflux protein oprM [Parabacteroides sp. D13] Length = 468 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/417 (24%), Positives = 218/417 (52%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------S 100 WW +F D L+ L+++A++QN ++ A +RI AK N+ S + P+ S Sbjct: 55 WWRNFKDPLLDSLIEVAVKQNYSVQMAMDRIAMAKANLRSAQGSYSPTLGLSAGWTRQQS 114 Query: 101 YASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 +I+ +P T S+ +D +W++D+FG R +++ N ++ + + A +++ + Sbjct: 115 SGNINQ--VPKAITQYSSATVDMNWEVDVFGSIRNRVKAEKENFAASKEEYNAAMVSLCA 172 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ SYI+ R ++ + +A Q + ++++ ++ G SKL + + ++ S ++ Sbjct: 173 QVASSYINMRELQQEVKVAQQNCRSQQTVVQITQKRYETGLVSKLDVAQAQSVYYSTKAS 232 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE ++++ LLG ++ M+ +++ P P+ +G+PA+L+ RPD+ Sbjct: 233 LPMLEAGIIQYANSLAILLGLYPSDLQKIMETEAS--LPEYIEPVGVGLPANLLLRRPDV 290 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNT-HWSFGPKLYLPIF 335 R E+++ A +G +KSD +P + + GS+ +HD + +N+ + P L F Sbjct: 291 RAAERQVNALAASLGASKSDWWPKVFVKGSVGFASHDFDKLANHNSLTYEIAPTLTWNFF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + R A++ E + +TVL +++EV+NA++S K + L+ V K+ Sbjct: 351 QGTQKIQATRLAKAQLDESIRQFNQTVLTSVQEVDNAMSSYKNSIKQIVALREVVNQGKQ 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ LS+ Y+QG ++LD +R+ + L+ A+ + + LY ++G G+NP Sbjct: 411 TLDLSLDLYKQGLTPFQNVLDAQRSLLTYQNQLTQAQGSSLLNLIQLYQSLGGGWNP 467 >gi|82701981|ref|YP_411547.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] gi|82410046|gb|ABB74155.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] Length = 504 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 114/452 (25%), Positives = 220/452 (48%), Gaps = 27/452 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C GP Y +P + + ++ G K +I WWE F D LN+L++IAL +N I Sbjct: 21 CMFGPNYRRPEIETM-EKYRFGE-KVARDIADTAWWEQFGDPILNELIRIALVENKDIRI 78 Query: 78 ATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD-----------SD 123 AT RI + + R++LFP S R + G +D ++ Sbjct: 79 ATARIEEFQGRYGATRSELFPQIGGDASAERLRSTAFVWPRGLGGIDPYYSYYQVSINAN 138 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID++G+ RR E++ L ++ A L +++ + SYI+ ++ IA Sbjct: 139 WEIDIWGRIRRLSEAARHQLFASEAARRATILTLVTSVASSYINLLILDRQLEIARATAA 198 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + +E+ +++ G S+L L ++E++ ++ + IP LE S + ++ LLG Sbjct: 199 TRRDTLEVFRMRYEGGVISQLELAQIESQYETAVAAIPPLESSIAQQENALAVLLGRNPG 258 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L +P ++ G+P++L+ RPD+R E+ L + A+IG A++ +P Sbjct: 259 PIARGREL------AKLELPMVSAGLPSELLMRRPDLREAEQNLISANAQIGAARALYFP 312 Query: 302 SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +SL G + + F G +FG +PIF G I +++AE+ ++ + + Sbjct: 313 RISLTGVLGVASTQLATLFTGPAYMAAFGVLTSVPIFTAGGIAGQVKQAEARHEQALVGY 372 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q + A +EVE++L ++ +++ + VE + + ++ + Y +G S +++LD + Sbjct: 373 QRAIQIAFREVEDSLIAVQKNRAELAAQTRRVEASRTYLEMAQLRYDEGYISFIEVLDAQ 432 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R + E + + ++ S VDLY ++G G+ Sbjct: 433 RTLFEAETTQAQTRGRVFNSLVDLYKSLGGGW 464 >gi|237748510|ref|ZP_04578990.1| outer membrane efflux protein [Oxalobacter formigenes OXCC13] gi|229379872|gb|EEO29963.1| outer membrane efflux protein [Oxalobacter formigenes OXCC13] Length = 485 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 129/467 (27%), Positives = 225/467 (48%), Gaps = 31/467 (6%) Query: 10 LFIVL-LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTS 60 LF+ + + GCT VGP+Y P + P F+ K + D L WW+ ++D Sbjct: 13 LFVCVGMVGCTTVGPDYKIPENADINKPGAAEPFAAAQEK-VFKSDALPDHWWKLYDDPV 71 Query: 61 LNKLVKIALQQNLTI------------LQATERINAAKENILSVRADLFPSSYAS--ISH 106 LN L++ +L N + + + +S SS AS + Sbjct: 72 LNSLIEKSLSNNTDLRVASANLARARAALEEAAMGTIPQVSVSAEPAFGRSSAASHGFGN 131 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 RF K + G L+ +++DLFGQ R IE++ A+ D+A A +D+ ++ V + +Y Sbjct: 132 RFSDAWKFD--GGLNVSYQLDLFGQIARGIEAASADTDAAQAALDVTRITVAADTAKAYA 189 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 DA +RI IA +L ++ ++ + G + + + + A+ +S+ + +P L+ Sbjct: 190 DACSSAQRIGIAEHSAELQRQFLDTTQQLTRGGRGTAMDVSRARAQYESLRAAVPPLQAQ 249 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ ++ ++ L G + + + P L I +G A L++ RPDIR E+KL Sbjct: 250 QKIALYKLAVLTGELPNALVATIGQCKT--APKLSQAIPVGDGAALLKRRPDIRQAERKL 307 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH-WSFGPKLYLPIFDKGKIKSN 343 A + A+IG+A +DLYP ++L S T N F N + WS GP + I D G +S Sbjct: 308 AATSARIGVATADLYPKINLGLSGGFTGRMNGFDQNNGYRWSIGPLISWTIPDTGTARSR 367 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I++A++ Q + + +VLNA+KE E+ALTS + L+ A + + + Sbjct: 368 IKQAKAEHQAAFARFDASVLNALKETESALTSYARELDRNALLKAARDQSALAADQAHRL 427 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ GR L LD ER A E + + +L + +++A+G G+ Sbjct: 428 YKHGRIDFLATLDAERTLANDESAYAASSAKLVNDQIGVFLALGGGW 474 >gi|187920527|ref|YP_001889559.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187718965|gb|ACD20188.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 523 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 126/433 (29%), Positives = 213/433 (49%), Gaps = 35/433 (8%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC +VGP++ +P L Q+ S+ + WW +FND L L + A ++ Sbjct: 24 LSGCVSVGPDFKQPEA-TLENQWLESLPRAAQATPAAQAAWWTAFNDPVLTALEQRAYER 82 Query: 72 NLT-------ILQATERINAAKENIL------SVRADLFPSSYASI---SHRFIPNLKTN 115 NL+ I +A ++ + EN+L SV AD +S +H + +L+ N Sbjct: 83 NLSLQVAGLHIFKARAQLATSAENLLPQSGSVSVGADHINTSGVGPIPPAHLWAEHLRAN 142 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 W+ID +G+ RR IES A L + A D + +++ + +YID R ++RI Sbjct: 143 V------GWEIDFWGKYRRQIESDRAQLRVSEAAYDNSLVSLFGDVANAYIDLRALEQRI 196 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A Q L ++++ L+ ++ GA+S+L + + + E+ IP L K+ + ++ Sbjct: 197 VVAQQNLKSVQQSLTLTQARYKHGASSQLDVEQAATLVAETEAQIPPLIKARAQDRDTLA 256 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL P Q + ++ P I++GIPADL+R RPD+R A A IG Sbjct: 257 VLLADPPDAV--DAQLKGSSAIPVPPTQIDVGIPADLLRRRPDVRQAALNAAAQSALIGA 314 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------FGPKLYLPIFDKGKIKSNIRRAE 348 AK+ LYPSLSL G L+ T W F + LPI D+G++K+ +R + Sbjct: 315 AKAKLYPSLSLTGLFGLSSGEQHGIGLTQWGSKTIGLFSAGITLPILDRGQLKNAVRIQD 374 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ QE + +Q TVL A K+VE+A+ + + A + ++++ L+ YR G Sbjct: 375 ATFQEAVLDYQNTVLQAQKDVEDAIAGLRTSLDALAASARASDASQRALRLANAQYRSGS 434 Query: 409 YSLLDILDIERAT 421 + +LD R+ Sbjct: 435 VTYDTVLDASRSA 447 >gi|167621647|ref|YP_001672155.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167351770|gb|ABZ74496.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 482 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 127/475 (26%), Positives = 226/475 (47%), Gaps = 39/475 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLV 65 +F+L VL A CTVGP+Y P + ++F +I + +WWE+ +D L+ + Sbjct: 8 LFALLPVLSA-CTVGPDYVGPPDKGISSRFVRMEDTAVIATPLVARWWETLDDPILDGIE 66 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQL--- 120 + AL+ N + + R+ A+ + RA+ P ++ A H +P + + G + Sbjct: 67 ERALRANPNMAASQARLRQARAMLRIERANAAPNVAAGALAGHGRVPESGSGAAGAMIPA 126 Query: 121 ----------------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D+ W+IDLFG +RR +E++ A +A A + A++++ +++ + Sbjct: 127 LVGTDERSFDLYTAAFDASWEIDLFGGRRRGVEAATATAQAAEATLADAQVSLTAEVAHA 186 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R ++RI +A + ++L ++ ++L+ +F +G S L + +L + ++ + + L Sbjct: 187 YIGLRDTQKRIVLAKRSVELQQQMLDLTRQQFERGVASALDVERLSMQFENTNARVAPLV 246 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ ++ L G + P + IG P ++R RPD+R E+ Sbjct: 247 AQAEGFMNALAWLCGEQPGALDAILDPPRPAPLPPPAV--AIGDPEAMLRRRPDVRAAER 304 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYLPIF 335 +LA A+IG+A++ +P LS G I LTH + F P L + Sbjct: 305 RLAADTARIGVAEAARFPRLSWMGVIGIGGTQPSDLTHLDDFVALGA-----PTLQWSVL 359 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+++ IR+ ES+ E + VL A+++ E+AL + V L A + Sbjct: 360 NFGRVQGQIRQRESARDEAEALYDAAVLGALRDTEDALARFRAGRATVAILARAKASADR 419 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S +L+ NYR GR SL+D L ER E LS A L YV L A+G G+ Sbjct: 420 SANLTQQNYRAGRASLIDALGAERHRIDAEDGLSAATAGLTADYVALQKALGLGW 474 >gi|187926717|ref|YP_001893062.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|241665049|ref|YP_002983408.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] gi|187728471|gb|ACD29635.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|240867076|gb|ACS64736.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 525 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 124/487 (25%), Positives = 218/487 (44%), Gaps = 48/487 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTS 60 R + + L+AGC VGP+Y+ P L T+ G L + + +WWE F D Sbjct: 17 RCVLAALTALVAGCAVGPDYSPPQ--LSGTEAPRGWHATLPHHGSRLALARWWEQFQDPV 74 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-------------- 106 L +LV+ A + T+ QA R+ A+ + S +A L P S S S Sbjct: 75 LAQLVEQADASSPTVAQAVGRVREARAVVSSSQAALLPQSKGSGSATRQGGFGGSQFGTG 134 Query: 107 ----------RFIPNLK----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 P L T Q D+ W+IDLFG +RR +E + A L ++ A Sbjct: 135 AGFGGLSSGAALGPALGLGTITTLAAQADASWEIDLFGGKRRSLEGADARLAASEADWHD 194 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++++ +++ +Y+ R + + I L ++ ++L+ KF G + + +A Sbjct: 195 ARVSLAAEVASTYLQQRQCEALVGIDAATLASRQETLQLTERKFRAGFAAPADDAQAQAS 254 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPA 269 + + + + + TL G + K + P+ +P +PA Sbjct: 255 VADAINVLEGQRAQCAQGIDKLVTLTGLDHDALNGLLAKANAQIPAPPDAGVPD---VPA 311 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHW 324 ++ RPD+ E+ +A + A IG+A + PS++L GSI + N+F W Sbjct: 312 RVLSQRPDVASAERAVAGASADIGVAVASRLPSITLAGSIGI---NAFRFSGQSATTKSW 368 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SFGP + LPIFD G + + A + + +++ V A++EVE+AL ++ + + Sbjct: 369 SFGPSVSLPIFDGGAGAARVETARARYDQALASYRAKVRQAVQEVEDALVRLDAADRRLD 428 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 A + K + + YR G SLL + D+ R + L+ + + A+++V LY Sbjct: 429 AATKADAQYAKVLDAASARYRLGAGSLLQLEDVRRTALQASQSLAAVRLERAQAWVALYK 488 Query: 445 AIGSGYN 451 A+G G+ Sbjct: 489 AVGGGWR 495 >gi|172065051|ref|YP_001815763.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997293|gb|ACB68210.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 499 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 124/467 (26%), Positives = 229/467 (49%), Gaps = 49/467 (10%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 C +VGP+YT P PL N S+N + + WW+ ++D L+ LV+ Sbjct: 22 CKSVGPDYTLPQQAYVNAPLANHALDDANGALVSRNAVPGN---WWQLYDDPVLDALVRS 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF----------- 108 AL+ N + R+ AA N+ RA L F S + R Sbjct: 79 ALKSNTDL-----RVAAA--NLARSRAALEVANEQGGFSGSAEAAVQRAQESAEQYLLEN 131 Query: 109 -IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + + G + +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++ Sbjct: 132 KLPVVNEGTVG-ISVSYELDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVE 190 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E Sbjct: 191 SCSAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQSDVTRGVTQVRTLSADIPRFEGRR 250 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + ++ LL + + + P L PI IG A L+R RPD+R E++LA Sbjct: 251 KIAQYQLAALLARSPADLPKAVAECER--LPKLRRPIPIGDGAALLRRRPDVREAERQLA 308 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ Sbjct: 309 AATARIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RAR 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE++ + VLNA++E +++L + D + L+ A E + S + Sbjct: 367 VREAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRL 426 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 427 FVAGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVKLFLALGGGW 473 >gi|150008362|ref|YP_001303105.1| outer membrane efflux protein oprM [Parabacteroides distasonis ATCC 8503] gi|149936786|gb|ABR43483.1| outer membrane efflux protein oprM precursor [Parabacteroides distasonis ATCC 8503] Length = 468 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/417 (25%), Positives = 217/417 (52%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------S 100 WW +F D L+ L+++A++QN ++ A +RI AK N+ S + P+ S Sbjct: 55 WWRNFKDPLLDSLIEVAVKQNYSVQMAMDRIAMAKANLRSAQGSYSPTLGLSAGWTRQQS 114 Query: 101 YASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 +I+ +P T S+ +D +W++D+FG R +++ N ++ + + A +++ + Sbjct: 115 SGNINQ--VPKAITQYSSATVDMNWEVDVFGSIRNRVKAEKENFAASKEEYNAAMVSLCA 172 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ SYI+ R ++ + +A Q + ++++ ++ G SKL + + ++ S ++ Sbjct: 173 QVASSYINMRELQQEVKVAQQNCRSQQTVVQITQKRYETGLVSKLDVAQAQSVYYSTKAS 232 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE ++++ LLG ++ M+ ++ P P+ +G+PA+L+ RPD+ Sbjct: 233 LPMLEAGIIQYTNSLAILLGLYPSDLQKIMETDAS--LPEYIEPVGVGLPANLLLRRPDV 290 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNT-HWSFGPKLYLPIF 335 R E+++ A +G +KSD +P + + GSI +HD + +N+ + P L F Sbjct: 291 RAAERQVNALAASLGASKSDWWPKVFVKGSIGFASHDFDKLANHNSLTYEIAPTLTWNFF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + R A++ E + +TVL +++EV+NA++S K + L+ V K+ Sbjct: 351 QGTQKIQATRLAKAQLDESIRQFNQTVLTSVQEVDNAMSSYKNSIKQIVALREVVNQGKQ 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ LS+ Y+QG ++LD +R+ + L+ A+ + + LY ++G G+NP Sbjct: 411 TLDLSLDLYKQGLTPFQNVLDAQRSLLTYQNQLTQAQGSSLLNLIQLYQSLGGGWNP 467 >gi|241759782|ref|ZP_04757882.1| outer membrane protein OprM [Neisseria flavescens SK114] gi|241319790|gb|EER56186.1| outer membrane protein OprM [Neisseria flavescens SK114] Length = 468 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 123/445 (27%), Positives = 214/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 19 LSACTMMPKYEQPQVAVADT-FKYDTVDDSIRAAELGWQDYFADPRLHRLIDIALERNTD 77 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLKTNSTGQLDSDWKIDL 128 + A ++ + R +L P+ AS + S G + +++DL Sbjct: 78 LRTAALNAEIYRKQYMIARNNLLPTVNASGTGSRQGSLSGGSVSSQYSVGLGATSYELDL 137 Query: 129 FGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L + A + A L +IS + +Y + R+ +E +++A ++L + Sbjct: 138 FGRVRSTSEAALQGYFNVAANRNAAHLTLISTVAKAYFNERYAEESMALAQRVLQTREAT 197 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L+ G S + L + EA I+S ++D + K+ ++++ L+ P E L Sbjct: 198 YKLSQLRHKAGVISAVDLRQQEALIESAKADYASAVKNREQARNSLAMLINQPLPEDLPV 257 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 S F+ + G+ +D++ NRPDIR E L + A IG A++ +P +SL G Sbjct: 258 GLPLSKQFK---MTKLPAGLSSDVLLNRPDIRAAEHALKQANANIGAARAAFFPRISLTG 314 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIFD G K+N+ A+ Q Q + ++ V + Sbjct: 315 SVGTASGELSGLFKSGTGIWAFAPSITLPIFDWGTNKANLDVAKLRQQAQIVAYEAAVQS 374 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A K+V NAL + + K L + S+ L + Y+ G + LD+LD ER++ Sbjct: 375 AFKDVSNALVAREQLDKSYAALSKQSRAYNDSLRLINLRYKHGVSNALDLLDAERSSYGA 434 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 435 ETALLANQLTRLENLADLYKALGGG 459 >gi|73538313|ref|YP_298680.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72121650|gb|AAZ63836.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 512 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 121/483 (25%), Positives = 231/483 (47%), Gaps = 51/483 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINID-TLKWWESFNDTSLNKLVKIALQQ 71 GC VGP++ +P P P F S S ++ + ++WW ND LN L + Sbjct: 23 GCAVGPDFERP-TPSAPDVFHRIQSAQASSKAVDAEFNVEWWTLLNDPLLNNLESRLVDA 81 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN-----LKTNSTGQ---- 119 NL + A+ R+ ++ V A P + S+ R PN L + TG Sbjct: 82 NLDVAAASARLRQSRSTQQVVGAAQLPRLDGAASYYRERGSPNGIVSLLGVSPTGSPPQP 141 Query: 120 ---------------------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 D+ W+ID++G+ RR +E++ A ++++ + Sbjct: 142 ASGSSPLGVAPVPGSSGSPPFDLYQFGFDASWEIDIWGRVRRSVEAAGALTEASFEDRNA 201 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 L+ ++L Y++ R + + I Q L++ + L+ ++ +G T+ L + A+ Sbjct: 202 ILLSARAELARDYVELRDLQSLLEITKQNLEIARDTARLTQVRAREGVTTDLDVANAAAQ 261 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + SIES +PTLE ++ I LL + ++ P L + +G P+++ Sbjct: 262 VASIESLMPTLEARLEAAINAIGLLLAEEPGALRQELAERREV--PELPERVPVGFPSEI 319 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNT-HWSFGP 328 ++ RPDIR E +L + A IG+AK+D YP +SLNGS +S + + + GP Sbjct: 320 VQRRPDIRRAEAQLHAATASIGMAKADFYPRISLNGSAGFQSLQLSSLADWASRQFVVGP 379 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + PIF+ G++K + E+ QE I ++ TVL+A +EV++AL + + +++ +L Sbjct: 380 SITFPIFEGGRLKGTLHLREAQQQEAAIAYKRTVLDAWREVDDALVAYDAEQRRRDRLVT 439 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V ++++++++ Y+ G LD+L+++R + + +L ++ A + + L +G Sbjct: 440 VVSENQRALAIAQRRYKAGAVDYLDVLNVQRQLLRSQSNLEQSRATAATNLITLCKVLGG 499 Query: 449 GYN 451 G+ Sbjct: 500 GWE 502 >gi|187921263|ref|YP_001890295.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187719701|gb|ACD20924.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 508 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 121/457 (26%), Positives = 221/457 (48%), Gaps = 27/457 (5%) Query: 17 GC-TVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTLK--WWESFNDTSLNKLVKIAL 69 GC VGP Y+ P L+ + G +L ++ WW+ ++D LN LV AL Sbjct: 24 GCMNVGPNYSLPQQALVNAPLANAPIEGADTSLTTRQSVPPVWWKLYDDPVLNGLVDQAL 83 Query: 70 QQNLTILQATERINAAKENILSVRA-DLFPSSYASISHRF------------IPNLKTNS 116 Q N + A + ++E + +A F +++ R +P + Sbjct: 84 QSNTDLRVAAANLARSREALGVAQAQGGFSGKSSAVIERAQESAEQYLLTEKLPVVNEGD 143 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G + ++IDLFG+ RR +E++ A+ +S A D+A++ V++ ++ SY++ E + Sbjct: 144 IG-ISISYEIDLFGKLRRGVEAAQADTESVQAAADLARITVVADVVRSYVEQCSAAEELR 202 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA Q L L K+ +++S G ++ + + + ++ ++ +DIP ++ + ++ Sbjct: 203 IAQQSLALQKQRVDVSRRLRDAGRGNQPDVTRGQTQVDTLSADIPRYMARRKIAQYRLAA 262 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LL ++ + + + P L PI IG A L++ RPD+R E++LA S A+IG+A Sbjct: 263 LLARAPSDLPPAVL--ACDRLPQLRQPIPIGDGAALLKRRPDVREAERELAASTARIGVA 320 Query: 296 KSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 LYP++S+ S LT ++ W FGP + F + +R A++S+Q Sbjct: 321 TGALYPTVSIGASAGLTGVLEDLGTSPTARWGFGPLISWQ-FPTNGARGRVREAQASSQV 379 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + VL A++E E L + + D L+ AV+ +S + YR GR S + Sbjct: 380 ALAKFDGVVLTALRETETNLATYSSDYARADALRAAVKSASESADETHRLYRAGRESFIS 439 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD R + + A+ Q+A V+L++A+G G+ Sbjct: 440 DLDATRTLTSTKSQAAAAEGQVAIDQVNLFLALGGGW 476 >gi|255015609|ref|ZP_05287735.1| outer membrane efflux protein oprM precursor [Bacteroides sp. 2_1_7] gi|262384502|ref|ZP_06077636.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_33B] gi|298375022|ref|ZP_06984979.1| outer membrane efflux protein OprM [Bacteroides sp. 3_1_19] gi|262293795|gb|EEY81729.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_33B] gi|298267522|gb|EFI09178.1| outer membrane efflux protein OprM [Bacteroides sp. 3_1_19] Length = 468 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/417 (25%), Positives = 217/417 (52%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------S 100 WW +F D L+ L+++A++QN ++ A +RI AK N+ S + P+ S Sbjct: 55 WWRNFKDPLLDSLIEVAVKQNYSVQMAMDRIAMAKANLRSAQGSYSPTLGLSAGWTRQQS 114 Query: 101 YASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 +I+ +P T S+ +D +W++D+FG R +++ N ++ + + A +++ + Sbjct: 115 SGNINQ--VPKAITQYSSATVDMNWEVDVFGSIRNRVKAEKENFAASKEEYNAAMVSLCA 172 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ SYI+ R ++ + +A Q + ++++ ++ G SKL + + ++ S ++ Sbjct: 173 QVASSYINMRELQQEVKVAQQNCRSQQTVVQITQKRYETGLVSKLDVAQAQSVYYSTKAS 232 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE ++++ LLG ++ M+ ++ P P+ +G+PA+L+ RPD+ Sbjct: 233 LPMLEAGIIQYANSLAILLGLYPSDLQKIMETDAS--LPEYIEPVGVGLPANLLLRRPDV 290 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNT-HWSFGPKLYLPIF 335 R E+++ A +G +KSD +P + + GSI +HD + +N+ + P L F Sbjct: 291 RAAERQVNALAASLGASKSDWWPKVFVKGSIGFASHDFDKLANHNSLTYEIAPTLTWNFF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + R A++ E + +TVL +++EV+NA++S K + L+ V K+ Sbjct: 351 QGTQKIQATRLAKAQLDESIRQFNQTVLTSVQEVDNAMSSYKNSIKQIVALREVVNQGKQ 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ LS+ Y+QG ++LD +R+ + L+ A+ + + LY ++G G+NP Sbjct: 411 TLDLSLDLYKQGLTPFQNVLDAQRSLLTYQNQLTQAQGSSLLNLIQLYQSLGGGWNP 467 >gi|17548890|ref|NP_522230.1| outer membrane CHANEL lipoprotein [Ralstonia solanacearum GMI1000] gi|17431140|emb|CAD17820.1| probable outer membrane chanel lipoprotein [Ralstonia solanacearum GMI1000] Length = 522 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 123/485 (25%), Positives = 221/485 (45%), Gaps = 43/485 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 RA+ +L + LA C VGP+Y P + + P + + + +WWE F+D +L Sbjct: 17 CRAVPTLLALALAACAVGPDYRAPRLAGVEAPAGWHATLPHHGSRMMLARWWEQFHDPAL 76 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------------- 99 +L++ A + T+ QA R+ A+ ++ S RA LFP Sbjct: 77 TQLIEQADADSPTLAQAVGRVREARASVSSSRAALFPQLKGSGSAVRQGGFGGSQVLGGA 136 Query: 100 -----SYASISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 S S+S T D W++DLFG +RR +E + A LD++ A A+ Sbjct: 137 AGTGVSATSVSPTLGLGTFTTLAATSDVSWELDLFGGKRRSLEGADARLDASLADWHDAR 196 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + + +++ +Y+ R + ++I L ++ ++L+ KF G + L + +A + Sbjct: 197 VTLSAEVASTYLQQRECEALVAIGETTLASRQETLQLTERKFGAGFVAPADLAQAQATVA 256 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADL 271 + + + + + TL+G + + P+ +P +PA + Sbjct: 257 DATNALESQRAQCAQGLDRLVTLIGLDHAALAALLASGTGRMPAPPDAAVPD---VPAQV 313 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYN---THWSF 326 + RPD+ E+ +A + A IG+A + PSL+L GSI + N+F G + WSF Sbjct: 314 LSQRPDVSSAERAVALASADIGVAVASRLPSLTLAGSIGI---NTFRISGQSLTSKSWSF 370 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 GP + LPIFD G + + A + + ++ V A +EVE+AL ++ + + Sbjct: 371 GPSVSLPIFDGGSGAARVETARARYDQALAGYRAKVRQAAQEVEDALVRLDAAGRRLDAA 430 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A + K + + YR G SLL + D+ R T L+ + + A+++V LY A+ Sbjct: 431 AVADAQYAKVLQAASARYRLGAGSLLQLEDVRRTTLSASQSLAAVRLERAQAWVALYKAV 490 Query: 447 GSGYN 451 G G+ Sbjct: 491 GGGWR 495 >gi|171315901|ref|ZP_02905130.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171098904|gb|EDT43694.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 492 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 124/467 (26%), Positives = 228/467 (48%), Gaps = 49/467 (10%) Query: 18 C-TVGPEYTKPHM-----PLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 C +VGP+Y P PL N S+N + + WW+ ++D L+ LV+ Sbjct: 22 CKSVGPDYKLPQQAYVNAPLANHALDDANDALVSRNAVPGN---WWQLYDDPVLDALVRS 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF----------- 108 AL+ N + R+ AA N+ RA L F S + R Sbjct: 79 ALKSNTDL-----RVAAA--NLARSRAALEVANEQGGFSGSAEAAVQRAQESAEQYLLEN 131 Query: 109 -IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + + G + +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++ Sbjct: 132 KLPVVNEGTVG-ISVSYELDLFGKLRRGVEAARADSEAVQAAADLARITVVADVVRAYVE 190 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E Sbjct: 191 SCSAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEGRR 250 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + ++ LL + + + P L PI IG A L+R RPD+R E++LA Sbjct: 251 KIAQYQLAALLARSPADLPKAVAECER--LPKLRQPIPIGDGAALLRRRPDVREAERQLA 308 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ Sbjct: 309 AATAQIGVATAALYPSISIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RAR 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE++ + VLNA++E +++L + D + L+ A E + S + Sbjct: 367 VREAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRL 426 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 427 YAAGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVKLFLALGGGW 473 >gi|261392066|emb|CAX49559.1| outer-membrane lipoprotein MtrE [Neisseria meningitidis 8013] Length = 467 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/448 (27%), Positives = 221/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L GS+ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NALT+ + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALTAREQLDKAYAALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|163748954|ref|ZP_02156205.1| Outer membrane efflux protein [Shewanella benthica KT99] gi|161331330|gb|EDQ02218.1| Outer membrane efflux protein [Shewanella benthica KT99] Length = 482 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 124/454 (27%), Positives = 222/454 (48%), Gaps = 21/454 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL+GC +GP+Y +P + + P Q+ +++ +NI W E + D L L++ AL + Sbjct: 24 ILLSGCAMGPDYQQPDLKI-PGQYHHDLAQDSGLNIGMTPWREFYLDPDLQVLIEHALSK 82 Query: 72 NLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPN--LKTNSTGQLDSD----- 123 NL + R+ AA+ I A +P + R I + TN + + + D Sbjct: 83 NLDLETVRSRLIAARSRITVTDAAFYPVLGMNANGERSIDSGITSTNPSHENEFDLVGTV 142 Query: 124 -WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D++G RR E+ A+ SA +++A +++IS + Y + ++R I+ + Sbjct: 143 SWELDIWGANRRRSEAEYAHFLSAQESLNLAVISLISDVASRYYEWLDIEQRYQISLNTV 202 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--- 238 +L KK L+ L+ G S L + + E E +S +P L+ + + + LLG Sbjct: 203 ELRKKERNLARLRKENGVISGLEVRQAEVEYQSARVTLPDLDFERQEKANQVRILLGEFS 262 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 YP K P+L+ +G+P+ ++ RPD++ E+ L + A +G+AK+ Sbjct: 263 YPLAVKTETDIKAEGKLFPDLFA---VGVPSQMLSQRPDVKAAEQGLIAANANVGVAKTA 319 Query: 299 LYPSLSLNGSIAL-THDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS ++ GS + D S F WS + PIF+ G I + A+ +++ Sbjct: 320 FFPSFTITGSYGRESADLSSIFDSQGVTWSLLGGITAPIFNAGSIAAQYDIAQEESKQAL 379 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + ++ TVL A EV +A+ S + + Q V + L+M+ YR G S LD++ Sbjct: 380 LAYRSTVLRAYFEVNDAMNSFRRSELAIEAQQELVAASTEYNRLAMLRYRNGVSSSLDLM 439 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D +R+ ++ LS+ KR S + LY A+G G Sbjct: 440 DAQRSLFGAQLSLSLVKRDRLLSMITLYRALGGG 473 >gi|301309122|ref|ZP_07215066.1| outer membrane efflux protein OprM [Bacteroides sp. 20_3] gi|300832804|gb|EFK63430.1| outer membrane efflux protein OprM [Bacteroides sp. 20_3] Length = 468 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/417 (24%), Positives = 217/417 (52%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------S 100 WW +F D L+ L+++A++QN ++ A +RI AK N+ S + P+ S Sbjct: 55 WWRNFKDPLLDSLIEVAVKQNYSVQMAMDRIAMAKANLRSAQGSYSPTLGLSAGWTRQQS 114 Query: 101 YASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 +I+ +P T S+ +D +W++D+FG R +++ N ++ + + A +++ + Sbjct: 115 SGNINQ--VPKAITQYSSATVDMNWEVDVFGSIRNRVKAEKENFAASKEEYNAAMVSLCA 172 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ SYI+ R ++ + +A Q + ++++ ++ G SKL + + ++ S ++ Sbjct: 173 QVASSYINMRELQQEVKVAQQNCRSQQTVVQITQKRYETGLVSKLDVAQAQSVYYSTKAS 232 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE ++++ LLG ++ M+ ++ P P+ +G+PA+L+ RPD+ Sbjct: 233 LPMLEAGIIQYANSLAILLGLYPSDLQKIMETDAS--LPEYIEPVGVGLPANLLLRRPDV 290 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNT-HWSFGPKLYLPIF 335 R E+++ A +G +KSD +P + + GS+ +HD + +N+ + P L F Sbjct: 291 RAAERQVNALAASLGASKSDWWPKVFVKGSVGFASHDFDKLANHNSLTYEIAPTLTWNFF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + R A++ E + +TVL +++EV+NA++S K + L+ V K+ Sbjct: 351 QGTQKIQATRLAKAQLDESIRQFNQTVLTSVQEVDNAMSSYKNSIKQIVALREVVNQGKQ 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ LS+ Y+QG ++LD +R+ + L+ A+ + + LY ++G G+NP Sbjct: 411 TLDLSLDLYKQGLTPFQNVLDAQRSLLTYQNQLTQAQGSSLLNLIQLYQSLGGGWNP 467 >gi|237746058|ref|ZP_04576538.1| outer membrane protein oprM [Oxalobacter formigenes HOxBLS] gi|229377409|gb|EEO27500.1| outer membrane protein oprM [Oxalobacter formigenes HOxBLS] Length = 477 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/456 (25%), Positives = 232/456 (50%), Gaps = 29/456 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+GC +GP+Y +P +P+ T + +S + ID+ +WWE F D LN +V+ A+ N Sbjct: 16 LSGCMMGPDYRRPDLPVPETYRFVPDSASQQAIDS-RWWEDFGDPVLNGMVEEAIVNNRD 74 Query: 75 ILQATERINAAKENILSVRADLFP-------SSYASISHR------FIPNLKTNSTGQLD 121 + A A I+ R+DLFP + +S R +PN ++ L Sbjct: 75 LRAALANAEKAAAAIMMARSDLFPQISLNARTGRERLSERDAEPVIGVPNPQSAREASLG 134 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+IDL+G+ RR ES+ A+ S A L+V+S ++ YI+ E++ IA Sbjct: 135 ATWEIDLWGRIRRLTESAEADAKSVEQARRAALLSVVSSVVTQYINLLALDEQLKIAQNT 194 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D Y +++ + L+F G TS++++ + ++ ++ +S IP + ++ + ++ L+G Sbjct: 195 SDNYAESLRIIELQFQYGVTSRMTVAQAASQYETAQSQIPQIRQNITQTENALNILMGKN 254 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + N +P + +P + +P++L+ RPD+ E+ L + A IG ++ + Sbjct: 255 PGPVMRGLSL--NRLKPPV-VPAD--LPSNLLLRRPDVLEAEQDLVSANAMIGATRAMYF 309 Query: 301 PSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P++SL G+ + + N + G WSF + +P+F G I S +++AE+ + Sbjct: 310 PTISLTGAFGSSSESLKNLWKGDAKTWSFAGVVSMPVFQGGSIYSQVKQAEAEQRAALAR 369 Query: 358 WQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ TV +A +V+NAL+ +NE +L + + + + L+ + Y +G + + Sbjct: 370 YEGTVQSAFADVDNALSMRMRVNEQLDREIRLVNQLSDYSR---LAKLQYDEGYSAYSVV 426 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +++ ++ L+ K S V++Y ++G G+ Sbjct: 427 LQADQSLFPRQLTLAQLKASSLTSVVNVYKSLGGGW 462 >gi|209518429|ref|ZP_03267252.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209501150|gb|EEA01183.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 490 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 121/471 (25%), Positives = 222/471 (47%), Gaps = 35/471 (7%) Query: 12 IVLLAGCTVGPEY----TKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLV 65 I LL+ CTVGP+Y F +K ++ +WW + D LN L+ Sbjct: 20 ISLLSACTVGPDYRGAPAVAPEAASAATFVRTPAKGIVTSGPAPSQWWLALGDPQLNALI 79 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS------- 116 A N + A R+ A++ + RA P S+ A+ P+L S Sbjct: 80 TAAFTHNPDLQAAQARLRASRAQLQQQRAAELPKLSADAAAVRLRQPSLSGLSSSSSQSS 139 Query: 117 ----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T D+ W+IDLFG RR IE++ A ++ A + A++++ +++ +YI Sbjct: 140 SSGRGPLQLYTAGFDASWEIDLFGGTRRAIEAASAQSEAVDADLADAQVSLAAEVAQAYI 199 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++R++IA + DL ++ + L+ + G + + + +L +++S S + L Sbjct: 200 GLRDQQQRLAIAQRTADLQQQMLTLTEQRRAGGTAADVDVERLVTQVESTRSTLTPLAAQ 259 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +++ ++ L G + + P + +++ PA ++ RPDIR E++L Sbjct: 260 VEISLDQLAVLTGRAPGALDAELAEM--GALPTMPTSLSVVDPATMLAQRPDIRAAERRL 317 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGKI 340 A S A+IG +D +P L+L G ++ T + PG+ N W P L +FD G+ Sbjct: 318 ASSNAQIGEHIADFFPKLTLYGDLSFTAGD--PGHLFRKANASWLGAPYLSWNVFDFGRT 375 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R AE+S E +++TVL A+++ + L+ ++ + LQ S L+ Sbjct: 376 QGAVRGAEASRDEAIANYEKTVLAALQDANDGLSRFGYQREHLATLQKVQASAVHSADLT 435 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G SL+D+LD +R + D+ + +L K +V L ++G G++ Sbjct: 436 RQRYRAGTTSLIDLLDTQRTEFAAQQDVVAGQAELLKDFVSLQKSLGLGWH 486 >gi|300022444|ref|YP_003755055.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomicrobium denitrificans ATCC 51888] gi|299524265|gb|ADJ22734.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomicrobium denitrificans ATCC 51888] Length = 510 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 126/481 (26%), Positives = 228/481 (47%), Gaps = 35/481 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDT------LKWWES 55 L+ + + L+GC +GP+Y P + P + T SI + +ID ++WW Sbjct: 7 LKFLLTTLAGALSGCALGPDYLLPRIGAPGMFTTSSIADQGAARSIDQSSSPEIVRWWTL 66 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA---DLFPSSYA--------SI 104 D L L++ A+ N I A I AA+ N ++VR LF ++ A S Sbjct: 67 LKDPQLGSLIERAIAANPDIEIAANHIRAARANEVAVRGLALPLFEANAAAARGTGTNST 126 Query: 105 SHRFIP--NLKTNSTG--------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 R N TN+ G D+ W++D FG+ RR E++ + D A Q Sbjct: 127 KGRVAGPLNAATNTAGLKEITHVAGFDAGWELDFFGKDRRAYEAAQYSTDVAIEQRHAVL 186 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 ++V++++ +YI+ R + +I + + + ++ +L +F +G T++L ++ Sbjct: 187 VSVVAEVAKAYIETRGVQAKIKASKENVARAQRTYDLMKTRFDRGLTNELDFKLASRQLA 246 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 ++++ + L I+ LLG + ++ S N P + G+P D+IR Sbjct: 247 TLKAQLAPLSAVEYAGCARIAVLLGTYSGGICQELK--SVNRIPATPDHLKTGLPVDVIR 304 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---YNTHWSFGPKL 330 RPD+R E++LA A+IG+A +DL+P L + L + +S GP + Sbjct: 305 RRPDVRAAERQLAVETARIGVAVADLFPRLQITAGGGLQGQGLGVVPVVTKSIYSVGPSV 364 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 Y P+ D G + S + + A QY+T++ ++++I+E+ AL+ + + L AV Sbjct: 365 YWPLLDFGTLDSLVHIQQLQADAQYLTYKRVIISSIEEINVALSRYRAAMETLQSLAKAV 424 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + K ++ LS Y +G L +LD ER ++E+ AK A ++V +Y A+G G+ Sbjct: 425 KESKGAVDLSTARYDRGVTDSLYVLDAERQDDELELQYLQAKADAAIAFVAVYKALGGGW 484 Query: 451 N 451 Sbjct: 485 E 485 >gi|261251644|ref|ZP_05944218.1| putative outer membrane protein [Vibrio orientalis CIP 102891] gi|260938517|gb|EEX94505.1| putative outer membrane protein [Vibrio orientalis CIP 102891] Length = 549 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 135/488 (27%), Positives = 254/488 (52%), Gaps = 49/488 (10%) Query: 6 AIFSLFIVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSL 61 AI SL + L+ CTV GP++T P LP+ +S+ + + K WW+ FND +L Sbjct: 11 AILSL--LGLSACTVVGPDFTLPEQRPLPSDWSVEQTDSDSQKSQQKLHLWWQQFNDPTL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSYA---SISHRFIPNLKTNST 117 N+LV++A QQNL + A RI A+ ++L + L +P A +++ ++ + N+ Sbjct: 69 NQLVEMASQQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQAVSGNLTRAYVNDQGVNNA 127 Query: 118 G-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G D+ W++D++G+ R IES+ A+ ++ A + + S++ +YI+ R F+ER+ Sbjct: 128 GLSFDAGWEMDVWGKYARGIESAEASYYASVASYHDIMVTITSEVARNYINYRTFQERLL 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + +++ ++ + ++ ++F G ++L + + + ++ + ++ +P+LE + + + +S Sbjct: 188 LSRRNIEIQQRVVNITQVQFDSGNVTELDVQQAKNQLFNTKAAMPSLEIAMKQSRMALSM 247 Query: 236 LLGYPATE---------FLHYM-----QKQSNNFQPNL-------YIP----INIGIPAD 270 LLG +E F M Q +S+N +P L +P ++ + A+ Sbjct: 248 LLGVLPSEIEALLSSERFNQQMADYEAQFKSSNRKPALSGNNDRSIVPHPPMLDKQVDAN 307 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF---- 326 L+ RPD+ E + AKIG+A++ LYP+ SL GSI + D++ P N+ +SF Sbjct: 308 LVMRRPDLLVSEMQARAQSAKIGVAETALYPNFSLFGSIGI--DSTVPDGNS-FSFSDSL 364 Query: 327 ----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 GP IF G++K+NIR ++ QE + + VL A+ EV NAL + + K Sbjct: 365 TMAIGPTFQWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNALDAYDLYLKQ 424 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + +V ++ ++SM Y G+ S +L + E + K +A + L Sbjct: 425 QSLRLQSVNSSIRAYNISMTQYENGQISFQRLLSSVEKMTRAEDSYASIKGNVANQVIAL 484 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 485 YKALGGGW 492 >gi|187734619|ref|YP_001876731.1| RND efflux system, outer membrane lipoprotein, NodT family [Akkermansia muciniphila ATCC BAA-835] gi|187424671|gb|ACD03950.1| RND efflux system, outer membrane lipoprotein, NodT family [Akkermansia muciniphila ATCC BAA-835] Length = 457 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 126/451 (27%), Positives = 221/451 (49%), Gaps = 14/451 (3%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L L C VGP++ P L P + + + D WW F D LN+LV +L Sbjct: 11 LAACFLGSCMVGPDFRTPTNDL-PATWEANRPPHSSDKDLRSWWNIFGDPQLNRLVSTSL 69 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-TNSTGQ-----LDSD 123 N + A RI A+E + +A L PS+ AS P+ +ST Q + Sbjct: 70 NNNPDMKVALLRIREAREKLRVSQASLLPSADASAGWSLSPDRGFRSSTSQNFSLGASTS 129 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++DLFG RR IE+S A+L S A + +++ + +Y D E++ IA + L+ Sbjct: 130 WELDLFGGNRRSIEASRASLMSTEASAGAVRTALLADVATAYFDWITACEQLRIAREQLE 189 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + + ++ ++ +L + + + + S ES IP LE + + ++ LLG + Sbjct: 190 IQRSTLTIAEKRYKTEFAPRLDVEQATSTVASTESRIPQLEAQVASSKNQLAVLLGTYNS 249 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + K S F+ +P+ G+P++L+R RPD+ E L +VA +G+A +DLYP Sbjct: 250 RVELTLPKASV-FEKTPTVPV--GLPSELLRRRPDVIAAEADLHAAVANVGVAVADLYPR 306 Query: 303 LSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 SL GS++ + F N WS G L P+F G +++ +R +++A++ T++ Sbjct: 307 FSLTGSLSSRGGDFGQLFRENNNAWSLGGNLLQPLFRGGALRATVRAQKAAAEQAAETYR 366 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +T++ A+ EVE+AL + + L ++++ LS Y G L+++ +R Sbjct: 367 KTLITAVSEVEDALIAYGSYTSQMQYLHKENNANREAFQLSRTLYINGETDFLNVITAQR 426 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + E L K+ + K+ V L A+G G+ Sbjct: 427 SWLSSEESLVTMKQNIRKAVVQLARALGGGW 457 >gi|167624092|ref|YP_001674386.1| RND efflux system outer membrane lipoprotein [Shewanella halifaxensis HAW-EB4] gi|167354114|gb|ABZ76727.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella halifaxensis HAW-EB4] Length = 512 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 124/455 (27%), Positives = 214/455 (47%), Gaps = 21/455 (4%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 I+LL+GC +GP+Y +P + + P QF + N+ W E + D L L++ AL Sbjct: 37 ILLLSGCAMGPDYQRPDLEI-PEQFHHELQQTDEQNVGLKHWREFYLDPELQVLIEHALD 95 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD------- 123 QNL + R+ AA+ + A LFP + + ST + D Sbjct: 96 QNLDLEGVRSRLLAARAGVTVTDAALFPVVGLDANGERALDSALTSTDPVKEDTFYVAGT 155 Query: 124 --WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G RR E+ AN S+ +++A +++IS + Y + ++R I+ Sbjct: 156 VSWELDLWGANRRRSEAEFANFISSQEALNLATISLISDVASRYYEWLDIEQRYQISLNT 215 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 ++L KK +L+ L+ G S L + + E E +S +P L+ + + LLG Sbjct: 216 VELRKKERDLARLRKQNGVISGLQVRQAEVEYQSARVTLPDLDYERSEKANQLRILLGEF 275 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 YP K P+ + +G+P+ ++ RPD++ E+ L + A +G+AK+ Sbjct: 276 KYPLIPKTEAQLKAEGALFPDSFA---VGVPSQMLSQRPDVKSAEQALVAANANVGVAKT 332 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P +++GS + F WS + PIF+ GKI + A+ A++ Sbjct: 333 AFFPKFTISGSYGSESESLSDIFDSQGITWSLLGGITAPIFNAGKITAQYDIAQEDAKQA 392 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++++ TVL A EV +A+ S + + Q V + L+ + YR G S LD+ Sbjct: 393 MLSYRSTVLGAYFEVNDAMNSFRRSELAIDAQQELVVASTEYTRLATLRYRNGVSSSLDL 452 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +D +R+ E+ LS KR S + LY A+G G Sbjct: 453 MDAQRSLFSAELTLSQVKRDQLLSMITLYRALGGG 487 >gi|300698004|ref|YP_003748665.1| RND efflux transporter outer membrane lipoprotein [Ralstonia solanacearum CFBP2957] gi|299074728|emb|CBJ54286.1| RND efflux transporter, outer membrane lipoprotein [Ralstonia solanacearum CFBP2957] Length = 507 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 125/470 (26%), Positives = 220/470 (46%), Gaps = 60/470 (12%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C + P Y P + Q + + ++ ++ + WW FND ++ +L++ A + T+ Sbjct: 38 ACALQPPYQAPQTAIATRWQAELPHGASVASL--VDWWSRFNDPAVAELIRRAEADSPTL 95 Query: 76 LQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSDW 124 +A +IN+A+ ++S AD +P+ S + + +L T +G LD+ W Sbjct: 96 AKAVAQINSARATLVSNGADAWPALTGSASVTRAKSATATGDTAVSSLSTTRSGALDASW 155 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +IDLFG+ R A+ SA AQ++ + ID H R+S+A ++ D Y Sbjct: 156 EIDLFGKVR------ASRQSAQAQLE------------ARIDDWH-DARVSLAAEVADDY 196 Query: 185 KKNIELSHLK--FTQGATSKLSLVKLE----------------AEIKSIESDIPTLEKSF 226 + L + Q A S+ K A+ + ++ ++S Sbjct: 197 VQYRACRQLAKAYAQSAASRAQTAKATRAAVAAGMSAASDGYLADGSTASANATATQQSV 256 Query: 227 RMN--VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI---PADLIRNRPDIRYQ 281 V ++ L G + + P+L P + PADL+R RPD+ Sbjct: 257 ACETLVKSLVALTGTDEPTLRGIIDRPGA---PDLPQPDTFSVTSVPADLVRQRPDLASA 313 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 E++L+ + A I A++D +PSLSL+GSIA++ S + WSFGP L LP+FD G+ K Sbjct: 314 ERELSAAYASIAKARADRFPSLSLSGSIAVSA-TSLVAPMSSWSFGPSLSLPLFDAGQRK 372 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A++S Q T++ V A+KEVE AL ++ + + A E +++ + Sbjct: 373 AAVDSAQASYDAQLATYRSAVRTAVKEVEQALVDLDGAARRSDDARQAAEQYRRYVGAIE 432 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 N+R G +LL + + R+ E+ L +R + +V LY A+G G+ Sbjct: 433 TNWRAGLDTLLTLEEARRSATTAEITLIELQRDRVRDWVSLYKALGGGWQ 482 >gi|237724772|ref|ZP_04555253.1| outer membrane protein oprM [Bacteroides sp. D4] gi|229436967|gb|EEO47044.1| outer membrane protein oprM [Bacteroides dorei 5_1_36/D4] Length = 457 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 29/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL C +G YT+P + L P Q ++ ++I ++WWE + DT+L L++ L Sbjct: 14 MTLLTSCQLGKHYTRPDLHL-PQQLDTLQQQDTLSIADMQWWEIYTDTTLQSLIEKTLDN 72 Query: 72 NLTILQATERIN--AAKENILSVRADLFP------------SSYASISHRFIPNLKTNST 117 N + A R+ AA + I A+LFP S+Y +++ P L Sbjct: 73 NKDMKIAAARVKELAAMKRI--DFANLFPQLNGGAYAQKEGSNYGGNNYKNDPEL----G 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G+L W++DL+G R + S+A + K++++S++ +Y + ++I Sbjct: 127 GKLTVTWELDLWGNLRWAKDKSIAQFLGSIEAQRALKMSIVSEVAQAYFELVALDNELNI 186 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 187 VRQTLYARKEGVRLAKLRFEGGLTSETSYQQAQVEYARTATLVPELERKISLKENDIAFL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E+ H +Q+ + L + +G+P+ L+ RPD+R E+KL + A +GIA Sbjct: 247 AG----EYPHRIQRSILPEEVKLPETLPVGLPSTLLERRPDVREAEQKLIAANASVGIAY 302 Query: 297 SDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++++P LSL + + + F H+ G L P+F GK ++ ++ +++ +++ Sbjct: 303 TNMFPRLSLTAQYGVESEEFSDFFKSPIHYISG-NLLTPLFAMGKYRATLQAKKAAYEQE 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++VL A KE NA+ N+ K I K +M L+ + Y G LD+ Sbjct: 362 CYSYEKSVLTAFKEARNAIVDFNKIKDIYESRLQLERSSKATMELAQLQYINGVIGYLDV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++ LS A R + V LY A+G G+ Sbjct: 422 LDAQRSYFDAQIGLSNAIRDKQITLVKLYKALGGGW 457 >gi|207725051|ref|YP_002255448.1| outer membrane lipoprotein [Ralstonia solanacearum MolK2] gi|206590281|emb|CAQ37242.1| outer membrane lipoprotein [Ralstonia solanacearum MolK2] Length = 494 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 127/469 (27%), Positives = 216/469 (46%), Gaps = 58/469 (12%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 C + P Y P + TQ+ + WW FND ++ +L++ A + T+ Sbjct: 25 ACALQPPYQAPQTAIA-TQWQAELPHGASVTGLVDWWSRFNDPAVAELIRRAEADSPTLA 83 Query: 77 QATERINAAKENILSVRADLFPSSYASIS-----------HRFIPNLKTNSTGQLDSDWK 125 +A +IN+A+ ++S AD +P+ S S + +L T +G LD+ W+ Sbjct: 84 KAVAQINSARATLVSNGADAWPALTGSASVTRAKSATASGDTAVSSLSTTRSGALDASWE 143 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 IDLFG+ R A+ SA AQ++ + ID H R+S+A ++ D Y Sbjct: 144 IDLFGKVR------ASRQSAQAQLE------------ARIDDWH-DARVSLAAEVADDYV 184 Query: 186 KNIELSHLK--FTQGATSKLSLVKLE----------------AEIKSIESDIPTLEKSFR 227 + L + Q A S+ K AE + ++ E+S Sbjct: 185 QYRACRQLAKAYAQSAASRAQTAKATRAAVAAGMTAASDGYLAEGSTASANATATEQSVA 244 Query: 228 MN--VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI---PADLIRNRPDIRYQE 282 V ++ L G + + P+L P + PADL+R RPD+ E Sbjct: 245 CETLVKSLVALTGTDEPTLRGIIDRPGA---PDLPRPDTFSVTSVPADLVRQRPDLASAE 301 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 ++L+ + A I A+++ +PSLSL+GSIA++ S + WSFGP L LP+FD G+ K+ Sbjct: 302 RELSAAYASIAKARANRFPSLSLSGSIAVSA-TSLVAPMSSWSFGPSLSLPLFDAGQRKA 360 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A++S Q T++ V A+KEVE AL ++ + + A E +++ + Sbjct: 361 AVDSAQASYDAQLATYRSAVRTAVKEVEQALVDLDGAARRSDDARQAAEQYRRYVGAIET 420 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 N+R G +LL + + R+ E+ L +R + ++ LY A+G G+ Sbjct: 421 NWRAGLDTLLTLEEARRSATTAEITLIELQRDRVRDWISLYKALGGGWQ 469 >gi|299069838|emb|CBJ41119.1| RND efflux transporter, outer membrane lipoprotein [Ralstonia solanacearum CMR15] Length = 503 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 116/463 (25%), Positives = 224/463 (48%), Gaps = 38/463 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 ++L+ C + P Y P + TQ+ + WW FND ++ +L++ A + Sbjct: 34 LVLSACALQPPYQAPQTAIA-TQWQAERPHGASVASLVDWWSRFNDPAVAELIRRAEADS 92 Query: 73 LTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLD 121 ++ +A +IN+A+ ++S AD +PS S + I +L T +G LD Sbjct: 93 PSLAKAVAQINSARATLVSNGADAWPSLTGSASVTRAKSATATGDTTISSLSTTRSGGLD 152 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+IDLFG+ R +S+ A L++ A++++ +++ Y+ R ++ + Q Sbjct: 153 ASWEIDLFGKVRASRQSAQAQLEARIDDWHDARVSLAAEVADDYVQYRACRQLATAYAQA 212 Query: 181 LDLYKKNIELSHLK------------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + +G+T+ + E + S E+ + +L Sbjct: 213 AASRAQTAKSTRAAVAAGMTAASDGYLAEGSTASANATATEQSV-SCETLVKSLVALTGT 271 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + ++ P L QP+ + ++ PADL+R RPD+ E+ LA Sbjct: 272 DEPTLRGIIDRPGAPDLP---------QPDTFSVTSV--PADLVRQRPDLASAERDLAAD 320 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A I A+++ +PSLSL+GSIA++ + + WSFGP L +P+FD G+ K+ + A+ Sbjct: 321 YASIAKARANRFPSLSLSGSIAISA-TTLAAPMSSWSFGPSLSVPLFDAGQRKAAVDSAQ 379 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ Q T++ +V A+KEVE AL +++ + + A E +++ +S N+R G Sbjct: 380 ATYDAQLATYRSSVRTAVKEVEQALVALDGAARRSDDARQAAEQYRRYVSAIETNWRAGL 439 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LL + + R++ E+ L +R + ++ LY A+G G+ Sbjct: 440 DTLLTLEEARRSSTTAEITLIELQRDRVRDWITLYKALGGGWQ 482 >gi|229587708|ref|YP_002869827.1| putative ABC transporter lipoprotein [Pseudomonas fluorescens SBW25] gi|229359574|emb|CAY46416.1| putative ABC transport system, lipoprotein [Pseudomonas fluorescens SBW25] Length = 481 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 123/475 (25%), Positives = 236/475 (49%), Gaps = 39/475 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPT------QFSIGNSKNLINIDTLKWWESFNDT 59 A +L ++ L+ CTVGP++ KP LP Q S+ + + +WW+ F+D Sbjct: 5 AWLTLSLISLSACTVGPDFHKPQS--LPVSQWNEPQGRQATSRAVSDPLQERWWDVFHDA 62 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L+ L + AL NL + A+ R+ ++ A+ +P+ A+ + L+ ++G+ Sbjct: 63 QLSALTRRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNLSANADY-----LRQRNSGK 117 Query: 120 LDSD--------------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 SD W++D +G+ +R E++ A L A L+V++ Sbjct: 118 GLSDPSGNNGRSAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAEDDRRAVLLSVLA 177 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + YI R + ++ Q LD+ + +++LS L+ G + L + + A++ +IE+ Sbjct: 178 ETAQDYIQLRGVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEAR 237 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P L++ ++ +S L+G P + LH Q + P + IG+P++L RPDI Sbjct: 238 LPDLQQRQDQLINALSLLMGEP-PQALH-AQLSKDAAVPQTQRQVAIGLPSELAERRPDI 295 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E +L + A IG+AK D YP ++L+GS+ A+ + + ++FGP+ LP+F Sbjct: 296 RQAEARLHAATASIGVAKGDFYPRITLSGSLGSQAMQLSDLGSWGSRAFAFGPQFSLPLF 355 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+++ + E+ QE + +Q+TVL A E+++ LT N + L AV ++ Sbjct: 356 NGGRLQGMLNLREAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQI 415 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S + Y +G +++L ++ A + + ++ + V LY A+G G+ Sbjct: 416 ALSTAQQQYVEGVVDFVNVLTVQSALLATQEQWVESSTGVSLAMVGLYKALGGGW 470 >gi|295689163|ref|YP_003592856.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295431066|gb|ADG10238.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 466 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 216/465 (46%), Gaps = 27/465 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWES 55 M+ L A+ +F +L++ C GP Y +P P + + G+S L L WW Sbjct: 1 MDRLLAVAPVFALLVSACAAGPNYNRPP-PAVAAAWQAPVPHGGDSGKL-----LAWWSG 54 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------- 107 F+D L L A + + ++ QA I+ A+ + + RA P+ S S Sbjct: 55 FDDPILTSLQASAEKTSPSLDQAIANIDKARATLTTQRAAALPNLTGSTSRTKSRQESAA 114 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + S LD+ W+IDLFG+ RR++E++ A +++ A++++ +++ Y+ Sbjct: 115 GGATISKVSQAALDASWEIDLFGKARRNVEAARARIEARTDDWHEARISLAAEVADDYVQ 174 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + Q + + + L L G + +A S S Sbjct: 175 LRGCEQLAEVLRQATESQETSARLIRLNADAGFSPASDAALADASAASTRSSFTDQRGQC 234 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + V ++++L G MQ + + + +PADL+R RPD+ E++LA Sbjct: 235 DLLVKSLASLTGLEEPALRTLMQPSAGVLPAPRKLDVT-SVPADLVRQRPDVASSERELA 293 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 + A+IG A +DLYPSL+L+GSI+ + G WSFGP L LPIFD G+ +++R Sbjct: 294 ATSAEIGAAVADLYPSLTLSGSISTSA-----GLQ-QWSFGPSLSLPIFDGGQRLASVRS 347 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A +S Q +++ V +A+ +VE AL +N ++ + A ++ S + YR Sbjct: 348 ARASYAYQLAAYRQAVRDAVLDVEQALVQLNVARQQQGDAETAARGYQASFKATDQLYRA 407 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LLD R E L + + ++ LY A+G G++ Sbjct: 408 GASDLLDRESARRNALDAEQSLINVRLTEIRQWIALYKALGGGWD 452 >gi|312958232|ref|ZP_07772754.1| RND efflux system [Pseudomonas fluorescens WH6] gi|311287498|gb|EFQ66057.1| RND efflux system [Pseudomonas fluorescens WH6] Length = 481 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 235/469 (50%), Gaps = 27/469 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS-----IGNSKNLINIDTLKWWESFNDTS 60 A +L ++ L CTVGP++ +P P + TQ+S +S+ + + +WW+ F+D Sbjct: 5 AWLTLSLISLNACTVGPDFQRPQTPQV-TQWSEPQGRQADSRAVSDPLQERWWDVFHDEQ 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---TNST 117 L+ L + AL NL + A+ R+ ++ A+ +P A+ +++ N ++ + Sbjct: 64 LSALTRRALTDNLDLKLASSRLEQSRAVRQVTTAERYPEVNATGAYQRKRNSGKGLSDPS 123 Query: 118 GQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 G+ + W++D +G+ +R E++ A L A L+V+++ Y Sbjct: 124 GENGRAAFNQWDMGFSAAWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQDY 183 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I R + ++ Q LD+ + ++ LS L+ G + L + + A++ +IE+ +P L++ Sbjct: 184 IQLRGVQNTRAVTEQNLDVARHSLRLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQ 243 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ +S L+G P + LH Q + P + IG+P+ L RPDIR E + Sbjct: 244 RQDQLINALSLLMGEP-PQALH-AQLSKDAAVPQAPRQVAIGLPSQLAERRPDIRQAEAR 301 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIK 341 L + A IG+AK D YP ++L+G++ F + + ++FGP+L LP+F+ G++K Sbjct: 302 LHAATASIGVAKGDFYPRITLSGNLGSQAMQLADFGSWGSRAFAFGPQLSLPLFNGGRLK 361 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + E+ QE + +Q TVL A E+++ LT N + L AV ++ ++ + Sbjct: 362 GMLNLREAQQQEAALAYQHTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALVTAQ 421 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y +G +++L ++ A + + ++ + V LY A+G G+ Sbjct: 422 HQYVEGVADFVNVLTVQSALLATQEQWVESSTGVSLAMVGLYKALGGGW 470 >gi|331014325|gb|EGH94381.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 490 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 128/481 (26%), Positives = 229/481 (47%), Gaps = 41/481 (8%) Query: 1 MNILRAI-FSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWES 55 + +LR + L I LL+ C VGP+Y KP P QF + + D + WWE Sbjct: 12 LELLRPLGLGLCIALLSACAVGPDYQKPSSAT-PAQFKAAAGWRAATPSDAMAKGAWWEV 70 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------- 99 + D LN LV N T+ Q + A+ + S R FP+ Sbjct: 71 YGDAQLNTLVARLNTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGAGT 130 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 S + S+ ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S Sbjct: 131 SSSGTSNTSASGIRNSYNAQLGVSWEADVWGKLRRVLEADTANAQASLADLAAMRLSLQS 190 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +L+ +Y+ R E+ + +D Y++++ L+ ++ G ++ + + ++KS ++D Sbjct: 191 ELVQNYMQLRVIDEQKRLLESTVDAYQRSLTLTRNQYRAGIAGTDAVAQAQTQLKSTQAD 250 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRN 274 + L + I+ L+G +F N P IP I G+P+ L+ Sbjct: 251 LIDLVWQRAQFENAIAVLMGVAPADF---------NLPPTTTIPQLPQIPPGVPSQLLER 301 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYP--SLSLNGSI-ALTHDNSFPGYNTHWSFGPKLY 331 RPDI E+ + + A IG+AK+ YP +LS++G + T N N WS GP+L Sbjct: 302 RPDIAAAERSVMGANANIGVAKAAYYPDFTLSMSGGYNSSTFANWISLPNRFWSVGPQLA 361 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 L +FD G+ + + R E+ + +++TVLN +EVEN L + ++ Q A+ Sbjct: 362 LTLFDGGRRSAEVDRTEALYDQTVAQYRQTVLNGFQEVENYLIQLKVYEEEAAVRQEALV 421 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S+ L+ Y+ G LD+++++ A + L++ + +L S V L A+G G+ Sbjct: 422 AARDSLRLTNNQYKAGLIGYLDVVNVQATALSNERTVLNVLQSRLIAS-VQLIAALGGGW 480 Query: 451 N 451 N Sbjct: 481 N 481 >gi|270262706|ref|ZP_06190977.1| hypothetical protein SOD_c03280 [Serratia odorifera 4Rx13] gi|270043390|gb|EFA16483.1| hypothetical protein SOD_c03280 [Serratia odorifera 4Rx13] Length = 485 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 134/468 (28%), Positives = 232/468 (49%), Gaps = 34/468 (7%) Query: 14 LLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+Y +P PL Q ++ + WWE F+D L+ LV AL Sbjct: 15 LLAGCAVGPDYHRPDAPLSDRYQAQSAVQHRSAARPASFAVWWEGFDDPLLSDLVSSALA 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKT----NST 117 QNL + QA+ R+ A+ + + A L PS +Y S+ L + N Sbjct: 75 QNLDLAQASARMAQARAALGAATAALLPSGNISGQATRAYQSVETPLGQVLSSTPDYNRY 134 Query: 118 G-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 G L++ W+ID+FG RR +++LA+ ++ A V +L V ++ YI R + Sbjct: 135 GNAYEADLNASWEIDIFGGLRRGRQAALADYQASEAGVAATRLAVAAQTADIYITLRGLQ 194 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++IA++ + ++ +E L ++G ++ + + E + +++ +P L+ ++ Sbjct: 195 TRLAIANKQVSTQQELLEKVQLLHSKGLAAEYQVRQTEGALAQVQATVPILQTGLDAAMN 254 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + +LG P H Q + P + G PADL+R RPDI E+ LA S A+ Sbjct: 255 ALDVMLGTPPGT--HRAQLTTPGAIPQAPQLTSTGTPADLLRRRPDIIVAERHLAASSAR 312 Query: 292 IGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG+A S+ YP SL+ + A+ N F + + L +FD G+I + I +A Sbjct: 313 IGVAVSEYYPKFSLSALLGSATAVASGNLFSSGASQSAGVLGLRWRLFDFGRINAQIDQA 372 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTS-INEDKK--IVTKLQHAVELHKKSMSLSMINY 404 + E ++ +VL A ++VENA ++ IN + + I+T + A+ ++S S + Y Sbjct: 373 KGQEAEALAAYRLSVLRATEDVENAFSALINRETQAAILTGGETALASARQS---SFVAY 429 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 RQG SL+D+L + + + A+ + A++ V + A+G G+ P Sbjct: 430 RQGTASLIDVLRNDETLLQASDARAQAQTESARAAVAAFRALGGGWQP 477 >gi|91778779|ref|YP_553987.1| major facilitator superfamily efflux pump outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91691439|gb|ABE34637.1| MFS efflux pump, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 547 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 126/509 (24%), Positives = 239/509 (46%), Gaps = 76/509 (14%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF----------SIGNSKNLINIDTL------KWWESF 56 +LLA C VGP++ P + P Q+ + ++ N+ ++ TL +WW +F Sbjct: 28 MLLAACAVGPDFHAPKADV-PDQWRDPQRSAAIATGASAANVASVPTLDTDPDPRWWRNF 86 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------F 108 ND +L+ L+ A + NL + +A RI A+ + S + P+ A+ S++ F Sbjct: 87 NDPTLDALIGRAARGNLDLQEAVLRIVEARTQVQSAASQGLPNVRATGSYQREQLGVKGF 146 Query: 109 I--------------PNLKTNS---------------------------TGQLDSDWKID 127 + PN N+ D+ W++D Sbjct: 147 LESDGVYGKVDQLGAPNSPVNAIAPGAGATLQNGANNLLNQLTAPVNLWQAGFDASWELD 206 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ RR +E++ A ++A + A L++ +++ +Y+ R + +I ++D ++ Sbjct: 207 LFGRVRRSVEAANAQTEAAVESRNDALLSLEAEVAQTYMQLRGAQALHAITASLVDEQRE 266 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + L+ + G TS+L + A++ ++ +P E+ ++ ++ L+G Sbjct: 267 IVTLTQSQAKVGLTSELDVKSATAQLAQTQAQLPQYEQQIAQALNGLAYLVGEAPGAL-- 324 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 ++ + P + + +G+P+ L R RPDIR E L + A +G+A + YP +SL Sbjct: 325 EVELAAPAAVPPVPPVVPVGLPSTLARRRPDIRRAEASLHSATANVGVAVAQFYPDVSLT 384 Query: 307 GSIALTHDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 G + N+ + WS FGP + LPIF G + SN+R +++ E + +++T Sbjct: 385 GQVGTRATNA--SDLSRWSHLFYSFGPSISLPIFQGGALVSNLRLSKAQEAEAALDYRKT 442 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL A+++V+NALT D+ L +V + + L+ +YR+G S +++LD ER Sbjct: 443 VLMALRDVDNALTVYRTDQARRDSLGESVAAEQAAFDLARDSYRKGITSFINVLDAERQL 502 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A+ + Q++ V LY A+G G+ Sbjct: 503 AQARQQYAQGTMQVSTDLVSLYKALGGGW 531 >gi|325204671|gb|ADZ00125.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M01-240355] Length = 467 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 22/449 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L GS+ TH G WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVD-THSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYES 369 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER+ Sbjct: 370 AVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERS 429 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + E A+ A++ DLY A+G G Sbjct: 430 SYSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|330965336|gb|EGH65596.1| outer membrane efflux protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 490 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 225/472 (47%), Gaps = 46/472 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I LL+ C VGP+Y KP P QF + + D + WWE + D LN LV+ Sbjct: 24 IALLSACAVGPDYQKPSSAA-PEQFKAAAGWRAATPSDAMAKGAWWEVYGDAQLNTLVER 82 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS----------------SYASISHRFIPN 111 N T+ Q + A+ + S R FP+ S + S+ Sbjct: 83 LNTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGAGTSSSGTSNTGASG 142 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 143 IRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYMQLRVI 202 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ + +D Y++++ L+ ++ G ++ + + ++KS ++D+ L Sbjct: 203 DEQKRLLESTVDAYQRSLTLTRNQYRAGIAGTDAVAQAQTQLKSTQADLIDLVWQRAQFE 262 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLA 286 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 263 NAIAVLMGVAPADF---------NLPATTSIPQLPQIPPGVPSQLLERRPDIAAAERSVM 313 Query: 287 DSVAKIGIAKSDLYP--SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKI 340 + A IG+AK+ YP +LS++G + ++F + N WS GP+L L +FD G+ Sbjct: 314 GANANIGVAKAAYYPDFTLSMSGGY---NSSTFANWISLPNRFWSVGPQLALTLFDGGRR 370 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 371 SAEVDRTEALYDQTVAQYRQTVLNGFQEVENYLIQLKVYEEEAAVRQEALVAARDSLRLT 430 Query: 401 MINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ A + L++ + +L S V L A+G G+N Sbjct: 431 NNQYKAGLIGYLDVVNVQATALSNERTVLNVLQSRLIAS-VQLIAALGGGWN 481 >gi|256829950|ref|YP_003158678.1| NodT family RND efflux system outer membrane lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256579126|gb|ACU90262.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfomicrobium baculatum DSM 4028] Length = 479 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 122/455 (26%), Positives = 223/455 (49%), Gaps = 22/455 (4%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LL+GC ++ P Y P +P+ P ++ N+++ + + W + F D SL L++ AL Sbjct: 18 MILLSGCASMAPRYEAPALPVAPI-YAPDNAQDGASASAIGWRDYFIDPSLQNLIQRALD 76 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQL--------- 120 N + A R+ A+ R++LFP+ + R N TG+ Sbjct: 77 NNRDLRTAVLRVEEARAVHGIQRSELFPTVGIQAGEDRSRTPADLNMTGKTLFASQFQAG 136 Query: 121 --DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++D +G+ R ++ ++L N + A A L +++++ SY F ERI++A Sbjct: 137 LGMASWELDFWGRVRSLQDAALENFLATDAARRAAALGLVAQVADSYFRLLEFDERIALA 196 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 HQ + ++ + + G+TS+ SL +++ + ++ LE+ H ++ L+ Sbjct: 197 HQTIASRTESFRIFTRRVEVGSTSRFSLTQVQTLLTQAQALGAQLEQEREAQFHALTLLV 256 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G AT + +Q + N + + G+P+DL+ RPDI E +L + A IG A++ Sbjct: 257 G--AT--IDPPPEQDQPGERNTLVRVRPGLPSDLLFQRPDIVAAEHRLKAANANIGAARA 312 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P ++L GS+ + F + W F P + LPIFD G +N+ AE Sbjct: 313 AFFPRIALTGSLGTASAELGDLFAAGSLAWIFSPSISLPIFDGGLRSANLSLAEIRLDMN 372 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TV A ++V +AL++ + + V+ Q A+E + LS + Y G + L++ Sbjct: 373 VANYEKTVQAAFRDVADALSARHWLARQVSIAQAALETQTERARLSQLRYDNGASAYLEV 432 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD +R E L +R L S+V LY A+G G Sbjct: 433 LDAQRDLLDTEQRLVQMRRALLTSHVSLYAALGGG 467 >gi|304386805|ref|ZP_07369070.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis ATCC 13091] gi|304339114|gb|EFM05203.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis ATCC 13091] Length = 483 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 125/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYEQPKVEVAET-FKNDTADSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +KI Sbjct: 93 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSL---SGGNVSSSYKIGLGAASYE 149 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 150 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 209 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 210 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 269 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 270 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 326 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 327 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYEAA 386 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 387 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 446 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 447 YSAEGAALSAQLTRAENLADLYKALGGG 474 >gi|254673966|emb|CBA09750.1| RND efflux system, outer membrane lipoprotein, NodT family [Neisseria meningitidis alpha275] gi|325130756|gb|EGC53492.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis OX99.30304] Length = 467 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 22/449 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L GS+ TH G WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVD-THSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYEA 369 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER+ Sbjct: 370 AVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERS 429 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + E A+ A++ DLY A+G G Sbjct: 430 SYSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|157962015|ref|YP_001502049.1| RND efflux system outer membrane lipoprotein [Shewanella pealeana ATCC 700345] gi|157847015|gb|ABV87514.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella pealeana ATCC 700345] Length = 518 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 124/455 (27%), Positives = 215/455 (47%), Gaps = 21/455 (4%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 I+LL+GC +GP+Y +P + + P QF + N+ W + + D L L++ AL Sbjct: 42 ILLLSGCAMGPDYQRPDLEI-PEQFHHELQQTDEQNVGLKHWRDFYLDPDLQVLIEHALD 100 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD------- 123 QNL + R+ AA+ + A LFP + + ST + D Sbjct: 101 QNLDLEGVRSRLLAARAGVTVTDAALFPVVGLDANGERALDSALTSTDPVKEDTFYVAGT 160 Query: 124 --WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G RR E+ AN S+ +++A +++IS + Y + ++R I+ Sbjct: 161 VSWELDLWGANRRRSEAEFANFISSQEALNLATISLISDVASRYYEWLDVEQRYQISLNT 220 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 ++L KK +L+ L+ G S L + + E E +S +P L+ + + LLG Sbjct: 221 VELRKKERDLARLRKQNGVISGLQVRQAEVEYQSARVTLPDLDYERSEKANQLRILLGEF 280 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 YP K P+ + +GIP+ ++ RPD++ E+ L + A +G+AK+ Sbjct: 281 TYPLIPKTEAQLKAEGALFPDSFA---VGIPSQMLSQRPDVKSAEQALVAANANVGVAKT 337 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P +++GS + F WS + PIF+ GKI + A+ +A++ Sbjct: 338 AFFPKFTISGSYGSESESLSDIFDSQGLTWSLLGGVTAPIFNAGKISAQYDIAQENAKQA 397 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++++ TVL A EV +A+ S + + Q V + L+ + YR G S LD+ Sbjct: 398 MLSYKSTVLGAYFEVNDAMNSFRRSELAIDAQQELVVASTEYTRLATLRYRNGVSSSLDL 457 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +D +R+ E+ LS KR S + LY A+G G Sbjct: 458 MDAQRSLFSAELTLSQVKRDRLLSMITLYRALGGG 492 >gi|312960658|ref|ZP_07775164.1| RND efflux transporter, outer membrane protein [Pseudomonas fluorescens WH6] gi|311285184|gb|EFQ63759.1| RND efflux transporter, outer membrane protein [Pseudomonas fluorescens WH6] Length = 476 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 126/482 (26%), Positives = 236/482 (48%), Gaps = 47/482 (9%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESF 56 M +L + +F LL+ C VGP+Y +P + + P QF + D+L WWE + Sbjct: 1 MKVL--VMVMFGALLSACAVGPDYKRPEV-VEPAQFKEAQGWRQATPSDSLARGAWWELY 57 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------- 106 D LN LV N T+ QA R A+ + S R +P+ S Sbjct: 58 GDRQLNDLVVRLNNANQTVAQAEARFRQAQALVRSSRGAFYPTVDLSAGKTRASQGTGSS 117 Query: 107 -----RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 ++ QL W+ D++G+ RR +E++ A+ +++ A + +L+ S+L Sbjct: 118 SASLSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSEL 177 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + SY+ R E+ + LD Y+++++++ ++ G + K ++ + + ++K+ ++ + Sbjct: 178 VQSYLQLRVMDEQTRLLQATLDTYQRSLQMTENQYRAGVSCKDAVAQAQTQLKTTQASLI 237 Query: 221 TLEKSFRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNR 275 L R + N I+ L+G F N + IP I + +P+ L+ R Sbjct: 238 DLIWQ-RAQLENAIAVLIGEAPANF---------NLAVSKDIPALPQIPVSLPSQLLERR 287 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDI E+ + + A IG+AK+ YP L+L+ G + T+ + N WS GPKL + Sbjct: 288 PDIASAERSVIAANANIGVAKAAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGPKLAM 347 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAV 390 +FD G+ + + R +S E +++TVL+ +EVEN + + ED+ +V+ A+ Sbjct: 348 TLFDGGQRSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSN--EAL 405 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E ++S+ L+ Y+ G + LD++ ++ A + L++ + +L S V L A+G G Sbjct: 406 EAARESLRLTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQSRLVAS-VQLIAALGGG 464 Query: 450 YN 451 ++ Sbjct: 465 WD 466 >gi|257093126|ref|YP_003166767.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045650|gb|ACV34838.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 472 Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 124/458 (27%), Positives = 227/458 (49%), Gaps = 37/458 (8%) Query: 16 AGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 +GC VGP+Y +P + + S ++++L N WWE F D LN LV AL++N Sbjct: 15 SGCMVGPDYVRPPVDTPAAWRLSEQDARDLANT---AWWEQFGDPVLNDLVATALRENKD 71 Query: 75 ILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQ---------LDS 122 ++ A R+ N VR+ LFP + Y R I + + G L++ Sbjct: 72 LMIAAARVEQFAGNYGIVRSGLFPQVGAGYEVRRQRDISAVVVGAGGDETYNSYNAVLNA 131 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+ID++G+ RR E++ A L ++ L+++ + +YI+ R ++ IA Sbjct: 132 SWEIDIWGRIRRQTEAARAQLMASEEGRRAVILSLVGSVSGAYINLRDLDRQLDIARATA 191 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-- 239 ++ E+ L+F G S L L + ++ + + IP LEK+ + +S LLG Sbjct: 192 KSRGESYEIFKLRFAGGIISVLELSQNRSQYEEALASIPPLEKAIAQQENGLSVLLGRNP 251 Query: 240 ---PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 P + + + L +P I G+P+DL+ RPDIR E+ L + A+IG A Sbjct: 252 GPIPRGKDIDH-----------LALPAIPAGLPSDLLERRPDIRRTEQDLIAANAQIGAA 300 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ +P++SL G N F + W++G + +PIF G I ++ AE++ Q Sbjct: 301 KAAYFPTISLTGLFGYASTSLSNLFDSQSKVWNYGAPITMPIFTAGAIAGQVQAAEAAQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +Q+ + A +EV ++L S + ++ + + VE ++ + + + Y G S + Sbjct: 361 QALFAYQKAIQEAFREVNDSLVSRDRTREQLKAQRRQVEALQQYAATARLRYDNGYTSYI 420 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER+ V++ + ++ +S ++LY+A+G G+ Sbjct: 421 EVLDAERSLFNVQLQYTQTQQVEFQSMINLYLAMGGGW 458 >gi|325128747|gb|EGC51610.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis N1568] gi|325205574|gb|ADZ01027.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M04-240196] Length = 467 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAALNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|307825958|ref|ZP_07656172.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307732933|gb|EFO03796.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 497 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 120/453 (26%), Positives = 232/453 (51%), Gaps = 29/453 (6%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 VGP+Y P +IG+ + + WW+ F D L +LV ++ N + A Sbjct: 41 VGPDYKTPATDAGQAFANIGHPEFSEQGVEVVWWKLFEDKGLTELVDQTVRHNRNLQAAR 100 Query: 80 ERINAAKENILSVRADLFPS--SYASISHR-----------FIP-NLKTNSTGQLDSDWK 125 + A+ L +L P+ S+A+ + + + P LK S G D+ W+ Sbjct: 101 ANLREARALYLDAGLNLAPTVTSHANYTEQKRSVGALNNLTYAPRELKLYSAG-FDAFWE 159 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D FG+ RR++E+S +D+ A + +++I+++ +Y + R ++++++A + Sbjct: 160 VDFFGRVRRNVEASSDEVDAQEANLRDLGVSLIAEVARNYFELRGLQQQLAVAKKNAGNQ 219 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATE 243 + +E++ ++ G ++L + A++ S S IP L+ + +H +S L G P T Sbjct: 220 AQTLEITRVRLEGGRGTELDTSRATAQLDSTLSTIPPLDNAIHQAMHRLSVLTGQLPGT- 278 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + ++ + P IP INIG PA+L+R RPDIR E+ LA + A+IG+A +DL+P Sbjct: 279 ----LTEKLSQPAPLPKIPKTINIGRPAELLRRRPDIRIAERGLAAATARIGVATADLFP 334 Query: 302 SLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 ++ G+++L + G +S GPK+ D G++ + I+ A++ A+ Sbjct: 335 RVTFVGTLSL-EATTLSGIGAVGSDAYSVGPKISWAALDLGRVYARIKAADARAEASLAQ 393 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++TVL+A++E ENAL + N ++ L A + +++ L+ + + +G L +LD Sbjct: 394 YEQTVLSALEETENALVNYNRERSRRELLTSAAQASERAHELAHLRFAEGVSDFLTVLDT 453 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + + L+ ++ A + LY A+G G+ Sbjct: 454 ELRLLQDQDRLAQSQTATATALAALYKALGGGW 486 >gi|224371895|ref|YP_002606061.1| outer membrane protein [Desulfobacterium autotrophicum HRM2] gi|223694614|gb|ACN17897.1| outer membrane protein [Desulfobacterium autotrophicum HRM2] Length = 499 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 220/451 (48%), Gaps = 22/451 (4%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLK-WWESFNDTSLNKLVKIALQQN 72 VGP+Y P P P ++ K L + TL WW +FND +L KL++ A+ N Sbjct: 38 AVVGPDYMVPD-PGAPKGWNTALPKGLTAAPPDARTLAGWWSTFNDPALTKLIERAVAGN 96 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ--------LDSDW 124 L + R+ A+ RAD+FP+ S + + G D+ W Sbjct: 97 LDLGLGRARVREARARRGIARADVFPTMNVSGAAARVHTSSETDLGTANDLYDAGFDAGW 156 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG RR +E + A+ +++ + +++++++ +Y++ R F+ R+S+A Sbjct: 157 ELDLFGGVRRSVEVAEASFEASQEGLHDVMVSLLAEVALNYVEVRSFQTRLSLAEANQRA 216 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PAT 242 ++ + + G TS L L + ++ S IP L + ++ L+G P + Sbjct: 217 QEQTYGMVATRSQTGMTSNLDLEQARYNLEETRSQIPLLHAGLEQAKNRLAVLVGQNPGS 276 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 ++++ P + +G+PAD +R RPDIR E++LA A +G+A + LYP Sbjct: 277 LKDELAERKAIPTPPPT---VAVGVPADALRRRPDIRKAERELAAQTAVVGVATARLYPR 333 Query: 303 LSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L GSI AL+ N F + + GP +FD G+I+ NI + ++ + ++ Sbjct: 334 FTLAGSIGLEALSLANLFERESGTFGLGPSFQWNLFDAGRIRQNIEVQNAIQEQALLRYE 393 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +VL A+ EVE+ LT E++ L A ++++ ++ YR G ++L+ +R Sbjct: 394 ASVLKALAEVEDTLTGYAEEQTRQRSLTAASGAAQRAVEIAQDQYRSGLTDFQNVLNGQR 453 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A ++ L+ ++ +A + LY A+G G+ Sbjct: 454 ALLSLQDQLAQSQGAVASDLISLYKALGGGW 484 >gi|297568606|ref|YP_003689950.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfurivibrio alkaliphilus AHT2] gi|296924521|gb|ADH85331.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfurivibrio alkaliphilus AHT2] Length = 471 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 130/474 (27%), Positives = 244/474 (51%), Gaps = 32/474 (6%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------NIDTLKWWE 54 + R LF +LLAGC++GPEY +P + P ++ I + +WW Sbjct: 1 MFRYSLMLFAILLAGCSLGPEYHRPEVAA-PVEYRYAEGYEEIWQQGEPADELPKGQWWR 59 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPN 111 + D +LN+L + A N + A R++ A+ RADLFP ++ R + Sbjct: 60 IYQDPALNELQERAAANNQQLRAAVARLDQARAVAGLSRADLFPRLDLQPSAQRGRTADD 119 Query: 112 LKTNSTGQ--------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L GQ LD +++D+ G+ RR E++ A +D++ A+++ +L + S++ Sbjct: 120 LSPLGEGQTTTTINLPLDLGYELDIRGRLRRLNEAAAAEVDASAAEMESFRLTLHSEVAR 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y ++ + L ++N L ++ G + KL L + E E+ + E+++ L Sbjct: 180 TYFTLLTLDRETALLEKTAQLRRQNQRLISSRYQHGLSDKLDLSRAETELAAAEAEVIML 239 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + H ++ LLG PA+ F H ++ FQ +P + G+PA+L++ RPD+ Sbjct: 240 RQRRSEVEHALALLLGEPASNFAHAA-NEAEEFQ----VPEVKPGLPAELLQRRPDVAAA 294 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKG 338 E++L + A+IG AK+ +PS+ L G+ + + N W+FGP++ LPIFD G Sbjct: 295 ERRLMAANARIGAAKAAFFPSIRLTGAAGFGSNELSSLLASGNRFWNFGPQISLPIFDGG 354 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++ + +A ++ +E +Q+T+L A++EVE+AL ++ + Q A+ ++++ Sbjct: 355 RNRAQLEQARAAHEEALADYQQTLLQAMQEVEDALATLALLHQQQQAQQRALRHARETVG 414 Query: 399 LSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G S L+I++ ER A + L + +QL ++ + L A+G G++ Sbjct: 415 LAHQRYRAGLVSYLEIIESERSALTQERAALQTSNQQL-QANIALIKALGGGWD 467 >gi|66957908|gb|AAY59070.1| outer membrane channel protein [Pseudomonas sp. M18] Length = 480 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 116/471 (24%), Positives = 221/471 (46%), Gaps = 41/471 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLI---------NIDTLKWWESFNDTSLNKLVKIA 68 CTVGP+Y +P + P ++ +S + WW+ F D L+ L A Sbjct: 11 CTVGPDY-QPPQSVSPQRWGDWHSGPEALRSTRHEGERLRDQAWWKVFGDPVLDDLQARA 69 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLKTNS 116 +Q N + A R A+ V + P S +++R + + + Sbjct: 70 MQANPELHGAILRFAQARMQRRIVSSAYLPEVTLEGGVSRQKQSLYGMNNRLLEATEPGN 129 Query: 117 TGQL---------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 L D+ W+ DL+G+ R +E++ A + A A +D L++ S++ Sbjct: 130 REALEKALGDPFTLYQAGFDASWEPDLWGRVGRSVEAARAEIGMAAAALDDTLLSISSEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 SYI+ R + +I + + + + ++ + L ++ +G T +L + + +AE++++ +P Sbjct: 190 ARSYIEVRTAQRQIRLLEEDIRMLEERLRLVRVRAGEGLTDELYVERQKAELEALRGRLP 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + S + I+ LLG ++ + N +G+P++L+R RPDIR Sbjct: 250 AWQASETEATNRIAVLLGERPGALARTLEAKPGNVLERALPDFRLGVPSELVRQRPDIRA 309 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDK 337 E+ L + A IGIAK+ LYPS++L D F + + WS GP L LP+FD Sbjct: 310 AEQSLHRATADIGIAKAALYPSIALGARFGYESYRDGKFGEWGSRAWSIGPTLDLPLFDA 369 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++ +R E QE +T+Q TVL A +EV++AL+ + + + ++ +++ Sbjct: 370 GRRRTVVRLRELEQQEAAVTFQRTVLGAWQEVDDALSRYHAEYQRNLHMRDKAASSRQAY 429 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + Y QG+ L+ +D +R + + + +L ++ L + LY +G Sbjct: 430 EWTQVKYAQGQVDFLEEIDAQRTSMQAQRELIDSEALLRTQLIALYKTLGG 480 >gi|254805463|ref|YP_003083684.1| probable outer membrane lipoprotein [Neisseria meningitidis alpha14] gi|254669005|emb|CBA07385.1| probable outer membrane lipoprotein [Neisseria meningitidis alpha14] Length = 467 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 22/449 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L GS+ TH G W F P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVD-THSAELGGLFKSGTGVWLFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYES 369 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A ++V NALT+ + K L K+++ L + Y+ G LD+LD ER+ Sbjct: 370 AVQSAFQDVANALTAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERS 429 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + E A+ A++ DLY A+G G Sbjct: 430 SYSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|325145096|gb|EGC67379.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M01-240013] Length = 483 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 93 LRTAALNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 149 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 150 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 209 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 210 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 269 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 270 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 326 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 327 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 386 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 387 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 446 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 447 YAAEGAALSAQLTRAENLADLYKALGGG 474 >gi|304321871|ref|YP_003855514.1| multidrug efflux system outer membrane subunit [Parvularcula bermudensis HTCC2503] gi|303300773|gb|ADM10372.1| multidrug efflux system outer membrane subunit [Parvularcula bermudensis HTCC2503] Length = 452 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 213/452 (47%), Gaps = 14/452 (3%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I ++ L C VGP+ T P + L P +S +L D WW F D +L+ L+ Sbjct: 6 CILGGALLSLTACAVGPDPTAPTVDL-PATYSAALPADLAGQDEEVWWAGFEDETLSTLM 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF---IPNLKTNSTGQLDS 122 L NL I A ++ A +VR+DLFP A S + I + T L S Sbjct: 65 VDVLAGNLDIATALATLSEAAALRGAVRSDLFPRLDAQGSAEYADLISGEGESETTTLLS 124 Query: 123 D---WKIDLFG--QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DL G +RR ++ + + + +L + + YID R R+++ Sbjct: 125 GVLAFEVDLAGGNRRRLEAAAADLEAAGFGVREAQRLATGTAAL-QYIDLRRSGARLALL 183 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 LDL + +++ +F G T L + + A++ +D L+ + + ++ L Sbjct: 184 ETSLDLQARTLDVVQARFDAGLTPALDVDRAAADLARTRADRGILQANRQAAAFTLAVLA 243 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P E + Q +++ P+ I +G PA L+R RPD+ E++L +A IG ++ Sbjct: 244 GRP-PERAQFGQS-TDDILPDYRGEITLGAPAMLLRQRPDVAQAEQRLIADLALIGAEQA 301 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 DLYPSL L I+ D F ++ + +P+ D G+ ++ +R + A+ Sbjct: 302 DLYPSLRLPAQISGDPDTDF--EPLLFTLSAIVDIPLLDAGRRRAEVRAQIARAEASLAE 359 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 WQ+TVL A+ EVE ALT I + + L AV+ +++ YR+G S +D+LD Sbjct: 360 WQQTVLVALTEVETALTRIEALRSRLENLDLAVQRSEEAYRQLDALYREGLTSFIDVLDA 419 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R + A+ LA + V L+I +G+G Sbjct: 420 QRTLIGSREAVVEARADLAVAIVQLHIGMGTG 451 >gi|218768728|ref|YP_002343240.1| putative outer membrane lipoprotein [Neisseria meningitidis Z2491] gi|121052736|emb|CAM09079.1| putative outer membrane lipoprotein [Neisseria meningitidis Z2491] gi|319410961|emb|CBY91357.1| outer-membrane lipoprotein MtrE [Neisseria meningitidis WUE 2594] Length = 467 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 22/449 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L GS+ TH G W F P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVD-THSAELGGLFKSGTGVWLFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYEA 369 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A ++V NALT+ + K L K+++ L + Y+ G LD+LD ER+ Sbjct: 370 AVQSAFQDVANALTAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERS 429 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + E A+ A++ DLY A+G G Sbjct: 430 SYSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|330824183|ref|YP_004387486.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329309555|gb|AEB83970.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 505 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 226/470 (48%), Gaps = 45/470 (9%) Query: 18 CTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVKIAL 69 C VGP++ KP P P T + G++ I + + WW +FND +L+ L + A Sbjct: 26 CAVGPDFVKP-TPAAPDDWTSWRSGDASLRIPTEATQALPAQWWLAFNDATLDALQQRAF 84 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFI------PN 111 + + A R A+ +V A P AS S R I P+ Sbjct: 85 DASPDLRTAALRFAQARAQRNTVAAQRGPEINASGSATRQRQSQSGAGTRMIGIMGADPS 144 Query: 112 LK-------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L T D+ W++DL+G+ RR +E++ A++ A +D+A+L + S + + Sbjct: 145 LTELLAEPFTLYQAGFDASWELDLWGRVRRSVEAADADVGHQAALLDLARLGLTSDVARN 204 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + R + +I + + + + L + G L + AE+ ++++ +P L Sbjct: 205 YFELRTAQRQIRLMREDIAALEDRAALLQARVEGGVLDHTDLQRQRAELAALKAQLPPLL 264 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + + I+ LLG P ++++ +P + +G+P+++ RPDIR Sbjct: 265 AQEAASANQIALLLGERPGALRAELAPREADA---GTSLPDLALGLPSEVALRRPDIRAA 321 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E +L + A IGIA++DLYPS+ L + L+ + S G T WS GP L LPIFD Sbjct: 322 EARLHSATASIGIARADLYPSIRLGATFGYESYLSGEFSDWGSRT-WSVGPSLGLPIFDH 380 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ ++ E QE I +Q+TVL A +E++++L++ + +++ +LQ + + Sbjct: 381 GRRKATVQLRELQQQEAAINYQQTVLKAWQEIDDSLSAYSAEQRQARELQTRSDAAGDAY 440 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ Y G +LD +R+ + DL+ ++ +L+ YV + AIG Sbjct: 441 QLAQARYDGGVTDFTAVLDAQRSYLQARRDLAASEGRLSTRYVTVNKAIG 490 >gi|254495971|ref|ZP_05108879.1| putative outer membrane transport protein involved in copper (silver) tolerance (cusC) [Legionella drancourtii LLAP12] gi|254354849|gb|EET13476.1| putative outer membrane transport protein involved in copper (silver) tolerance (cusC) [Legionella drancourtii LLAP12] Length = 479 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 121/466 (25%), Positives = 221/466 (47%), Gaps = 28/466 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +F V+L GC+ P+Y +P +P+ + NI W F D +L +L+ Sbjct: 21 CLFYCLSVILFGCSFAPKYIRPPIPVAEEYPRGTGPQKYTNIRQFGWNVFFTDPALKQLI 80 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSS-------YASISHRFIPNLK----T 114 ++L N + A ER+ A+ +ADLFPS A + +PN+ + Sbjct: 81 ALSLNNNRDLRTAIERMGEARAMYGLQKADLFPSLNANALGLKAGVPGNLLPNMNPFVFS 140 Query: 115 NSTGQLD-SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 G L S W+ID +G+ R++ E LA D+ +A +++I ++ +Y+ Sbjct: 141 AYLGALSVSSWEIDFWGRLRNLKDAALEHYLATEDAEHATF----ISLIEQVANTYLTEH 196 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E I I + + K + L +F +G++SK +V+ E ++ S++ LE+ + Sbjct: 197 ELNELIHITLKTIKSRKHSYHLMKRRFEEGSSSKFEVVQAETLLQQANSELTVLERKREL 256 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 N + ++ L+G + Q + P+ I+ G+P++L+ NRPD+ E +L + Sbjct: 257 NWNAMTLLVGTQ----IPINQSRLARVAPSYIKEISPGLPSELLYNRPDVIAAEHRLKAA 312 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P ++L G+ T +N F W++ P + LPIFD G+ S++ Sbjct: 313 NANIGAARAAFFPRITLTGAYGTTSSELNNLFSPGTKIWTYFPNITLPIFDWGRNMSDLG 372 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ ++ T+ A +EV +AL + K + A+ K+ L+ Y+ Sbjct: 373 LAKARQNLAITEYEHTIQVAFREVADALANRTWLAKQIIVQNKALASQKERTHLAWARYK 432 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++LD ER E L + +L S ++LY+A+G G+ Sbjct: 433 VGSSPYLEVLDAERDKFVAEQSLVQTRYELLASQINLYVALGGGHG 478 >gi|121635350|ref|YP_975595.1| putative outer membrane lipoprotein [Neisseria meningitidis FAM18] gi|120867056|emb|CAM10820.1| putative outer membrane lipoprotein [Neisseria meningitidis FAM18] gi|325132797|gb|EGC55477.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M6190] Length = 483 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 93 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 149 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 150 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 209 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 210 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 269 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 270 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 326 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 327 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 386 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 387 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 446 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 447 YSAEGAALSAQLTRAENLADLYKALGGG 474 >gi|325138700|gb|EGC61252.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis ES14902] Length = 467 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|325198807|gb|ADY94263.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis G2136] Length = 467 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|330875077|gb|EGH09226.1| outer membrane efflux protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 490 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 225/472 (47%), Gaps = 46/472 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I LL+ C VGP+Y KP P QF + + D + WWE + D LN LV+ Sbjct: 24 ISLLSACAVGPDYQKPSSAA-PEQFKAAAGWRAATPSDAMAKGAWWEVYGDAQLNTLVER 82 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS----------------SYASISHRFIPN 111 N T+ Q + A+ + S R FP+ S + S+ Sbjct: 83 LNTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGAGTSSSGTSNTGASG 142 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 143 IRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYMQLRVI 202 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ + +D Y++++ L+ ++ G ++ + + ++KS ++D+ L Sbjct: 203 DEQKRLLESTVDAYQRSLTLTRNQYRAGIAGTDAVAQAQTQLKSTQADLIDLVWQRAQFE 262 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLA 286 + I+ L+G +F N IP I G+P+ L+ RPDI E+ + Sbjct: 263 NAIAVLMGVAPADF---------NLPATTSIPQLPQIPPGVPSQLLERRPDIAAAERSVM 313 Query: 287 DSVAKIGIAKSDLYP--SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKI 340 + A IG+AK+ YP +LS++G + ++F + N WS GP+L L +FD G+ Sbjct: 314 GANANIGVAKAAYYPDFTLSMSGGY---NSSTFANWISLPNRFWSVGPQLALTLFDGGRR 370 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 371 SAEVDRTEALYDQTVAQYRQTVLNGFQEVENYLIQLKVYEEEAAVRQEALVAARDSLRLT 430 Query: 401 MINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ A + L++ + +L S V L A+G G+N Sbjct: 431 NNQYKAGLIGYLDVVNVQATALSNERTVLNVLQSRLIAS-VQLIAALGGGWN 481 >gi|307293684|ref|ZP_07573528.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306879835|gb|EFN11052.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 493 Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 126/456 (27%), Positives = 212/456 (46%), Gaps = 48/456 (10%) Query: 1 MNILRAIFSLFIVL--LAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWE 54 M IL +I ++ L GC VGP Y P + P G + +D + WW Sbjct: 11 MRILSSILTVVATAGWLGGCAVGPSYVAPEVAASPAFMGSLAVEGATGQAAKVDLVNWWR 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 SF+D L LV+ AL QNL + QA+ R+ A+ + +ADL PS +S + N ++ Sbjct: 71 SFDDPLLASLVESALAQNLDLQQASARVVQARAALRHAKADLLPSG--QVSGQASENYQS 128 Query: 115 NSTGQ--------------------LDSDWKIDLFGQRRHIESSLANL-DSAYAQVDIAK 153 T Q L + W++DLFG + + ++ A A+ Sbjct: 129 LETPQGRIASALPGFDREAQSYDLNLGASWEVDLFGGKDAARDAARADWQASAAGAAAAR 188 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L V ++ +Y+ R + R+ +A L + ++ ++L L++ +G ++L L + E + Sbjct: 189 LAVAAQTADTYVAIRSLQARLDVARDQLRVQQQLVDLVALQYRKGVAAELQLRQAEGALA 248 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-------NIG 266 +++ +P LE++ ++ + LLG +Q S + +PI + G Sbjct: 249 QVKASVPELEQNLDTAMNALDVLLG---------LQPGSTRSELAAVVPIPNVPAVSDAG 299 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH 323 PA L+R RPDI E+ LA S A+IG+A S+ YP SL+ G+ + F G T Sbjct: 300 GPAALLRRRPDIIAAERTLAASNARIGVAISEYYPKFSLSGLLGTATMGVGGLFSGNATQ 359 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S L +FD G+I + I A E ++ VL A ++VENA +++ + + Sbjct: 360 ASGVLGLRWRLFDFGRIDAEIAAARGRNAEALAGYRLAVLRASEDVENAFSALVKQQARA 419 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 L V K+ + S+ Y+ G SLLD+LD ++ Sbjct: 420 RILDQGVSSLTKARASSLAAYKGGVSSLLDVLDADQ 455 >gi|161870560|ref|YP_001599732.1| outer membrane lipoprotein [Neisseria meningitidis 053442] gi|161596113|gb|ABX73773.1| outer membrane lipoprotein [Neisseria meningitidis 053442] Length = 467 Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|240014611|ref|ZP_04721524.1| MtrE [Neisseria gonorrhoeae DGI18] gi|240017056|ref|ZP_04723596.1| MtrE [Neisseria gonorrhoeae FA6140] gi|240113515|ref|ZP_04728005.1| MtrE [Neisseria gonorrhoeae MS11] gi|240116132|ref|ZP_04730194.1| MtrE [Neisseria gonorrhoeae PID18] gi|240121133|ref|ZP_04734095.1| MtrE [Neisseria gonorrhoeae PID24-1] gi|240126161|ref|ZP_04739047.1| MtrE [Neisseria gonorrhoeae SK-92-679] gi|240128638|ref|ZP_04741299.1| MtrE [Neisseria gonorrhoeae SK-93-1035] gi|254494152|ref|ZP_05107323.1| outer membrane lipoprotein [Neisseria gonorrhoeae 1291] gi|260440056|ref|ZP_05793872.1| MtrE [Neisseria gonorrhoeae DGI2] gi|268599582|ref|ZP_06133749.1| outer membrane lipoprotein [Neisseria gonorrhoeae MS11] gi|268601800|ref|ZP_06135967.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID18] gi|268684750|ref|ZP_06151612.1| outer membrane lipoprotein [Neisseria gonorrhoeae SK-92-679] gi|268687029|ref|ZP_06153891.1| outer membrane lipoprotein [Neisseria gonorrhoeae SK-93-1035] gi|291043344|ref|ZP_06569067.1| tetrahydromethanopterin S-methyltransferase subunit E [Neisseria gonorrhoeae DGI2] gi|226513192|gb|EEH62537.1| outer membrane lipoprotein [Neisseria gonorrhoeae 1291] gi|268583713|gb|EEZ48389.1| outer membrane lipoprotein [Neisseria gonorrhoeae MS11] gi|268585931|gb|EEZ50607.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID18] gi|268625034|gb|EEZ57434.1| outer membrane lipoprotein [Neisseria gonorrhoeae SK-92-679] gi|268627313|gb|EEZ59713.1| outer membrane lipoprotein [Neisseria gonorrhoeae SK-93-1035] gi|291012950|gb|EFE04933.1| tetrahydromethanopterin S-methyltransferase subunit E [Neisseria gonorrhoeae DGI2] Length = 467 Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|316985725|gb|EFV64670.1| outer membrane protein oprM [Neisseria meningitidis H44/76] gi|325140825|gb|EGC63335.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis CU385] Length = 483 Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 93 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 149 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 150 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 209 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 210 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 269 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 270 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 326 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 327 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQVQIVAYESA 386 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 387 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 446 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 447 YAAEGAALSAQLTRAENLADLYKALGGG 474 >gi|254670148|emb|CBA05174.1| RND efflux system, outer membrane lipoprotein, NodT family [Neisseria meningitidis alpha153] Length = 467 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F WSF P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTRSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|330991755|ref|ZP_08315705.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329761223|gb|EGG77717.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 538 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 126/500 (25%), Positives = 239/500 (47%), Gaps = 72/500 (14%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFS---------------IGNSKNLINIDTLKWWESFN 57 V+ AGC VGP + KP P P Q+ + + + DT WW F+ Sbjct: 6 VMTAGCAVGPNFHKP-TPWAPKQYGGPARIAPDGTNSPAQVASQTTQDDPDT-AWWTLFH 63 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----------- 106 D L +L + NL + R+ ++ + A+ +P AS S+ Sbjct: 64 DAELTRLEQRVATDNLDVRAYAYRMAQSRAELRIAGAERYPGLSASGSYARQQYSTKMLQ 123 Query: 107 RFIPNLKT-----NSTG---------------------QLDSDWKIDLFGQ-RRHIESSL 139 R + ++++ N+ G +D+ W++DL+G+ RR E++ Sbjct: 124 RIVTDVESDPQLANTPGFSQFAPTPGEAKIPLFNQWRDSVDATWELDLWGRVRREYEAAA 183 Query: 140 ANLDSAYAQVDIAKLNVI----SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 AN + V+ A+ ++ S++ Y+D R+ +E++ I + D+ K ++L+ ++ Sbjct: 184 ANTQA----VNEARRGMLISRQSEVARDYMDLRNTQEQLRIVMENRDVAKSMLDLNQQRY 239 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 T+G S L + + A+ +S + IP LE+ + V+ +S L+G P + + Sbjct: 240 TKGLASNLEVEQARAQYESTLAQIPQLEQQLVLQVNALSLLMGEPPRALSDELLTAAAIP 299 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--- 312 + + +G+P++L R RPDIR E L ++A++G A ++ YP +++N Sbjct: 300 --PVPPRVPVGVPSELARRRPDIRRAEASLHAAIAQVGEAVAEFYPRVTINAGFGFESLS 357 Query: 313 -HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 D F +N W+ GP + LP+F G+++ + +++ +E I +Q+TVL A +V+ Sbjct: 358 FRDLGF--WNAKAWNVGPSITLPLFQGGRLRGQLELRKAAQKEAAINYQKTVLGAWHDVD 415 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 NALT+ ++++ +L VE ++ L+ YR G + L +LD +R E DL+ Sbjct: 416 NALTAYTDEQRRHDELARRVEASHHALQLAQDQYRNGMVTYLTVLDTQRQYLGAESDLTT 475 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 + ++ + V LY A+G G+ Sbjct: 476 STATISGNLVRLYNALGGGW 495 >gi|325142863|gb|EGC65230.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis 961-5945] Length = 467 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L GS+ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGSVGTRSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|229590215|ref|YP_002872334.1| putative outer membrane efflux protein [Pseudomonas fluorescens SBW25] gi|229362081|emb|CAY48983.1| putative outer membrane efflux protein [Pseudomonas fluorescens SBW25] Length = 494 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 123/475 (25%), Positives = 231/475 (48%), Gaps = 43/475 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLN 62 + L VLL+ C +GP+Y +P + + P QF + D+L WWE + D LN Sbjct: 24 VMVLCGVLLSACAIGPDYKRPDV-IEPAQFKEAQGWRQATPSDSLARGAWWELYGDRQLN 82 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------------R 107 LV N T+ QA R A+ + S R +PS S+ Sbjct: 83 DLVLRLNTSNQTVAQAEARFRQAQALVRSSRGAFYPSVDLSVGKTRASQGTGSSSASLSS 142 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ QL W+ D++G+ RR +E++ A+ +++ A + +L+ S+L+ SY+ Sbjct: 143 SSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQ 202 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R E+ + L+ Y+++++++ ++ G + K ++ + + ++K+ ++ + L Sbjct: 203 LRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLIWQR 262 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQE 282 + I+ L+G F N + IP I + +P+ L+ RPDI E Sbjct: 263 AQLENAIAVLIGEAPANF---------NLAVSKDIPALPQIPVSLPSQLLERRPDIASAE 313 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + + + A IG+AK+ YP LSL+ G + T+ + N WS GPKL + +FD G+ Sbjct: 314 RSVIAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQ 373 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSM 397 + + R +S E +++TVL+ +EVEN + + ED+ +V+ A+E ++S+ Sbjct: 374 RSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSN--EALEAARESL 431 Query: 398 SLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G + LD++ ++ A + L++ + +L S V L A+G G++ Sbjct: 432 RLTQNQYEAGLIAYLDVVTVQATALSNERTVLTLLQTRLVAS-VQLIAALGGGWD 485 >gi|261364144|ref|ZP_05977027.1| multiple transferable resistance system protein MtrE [Neisseria mucosa ATCC 25996] gi|288567731|gb|EFC89291.1| multiple transferable resistance system protein MtrE [Neisseria mucosa ATCC 25996] Length = 472 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 122/447 (27%), Positives = 217/447 (48%), Gaps = 14/447 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 V L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 17 VALSACTMIPKYEQPQVEVAET-FKYDTFDDGIRAADLGWQDFFADLRLHRLIDIALERN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN------STGQLDSDWKI 126 + A ++ + R DL PS AS + + +L S G + +++ Sbjct: 76 TDLRTAALNAEIYRKQYMIARNDLLPSINASGTGTRVGSLSGGVTRSEYSVGLGAAAYEL 135 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ R + +++L S A D A L +I+ + ++ + + +E +++A ++L + Sbjct: 136 DLFGRVRSNSQAALQGYFSVAANRDAAHLALIAAVAKAHFNELYAQESMALAQRVLKTRE 195 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +LS ++ G S + L + EA I+S ++D K+ + ++TL+ P E L Sbjct: 196 TTYKLSQMRHKAGVISAVDLRQQEALIESAKADYANAVKNREQARNALATLINQPLPEDL 255 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S F+ + G+ ++++ NRPDIR E L + A IG A++ +P++SL Sbjct: 256 PAALPLSKQFK---ITRLPAGLSSEVLLNRPDIRAAEHSLKQANANIGAARAAFFPTISL 312 Query: 306 NGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 GS+ F WSF P + LPIF+ G K+N+ A + Q +T++ V Sbjct: 313 TGSVGTASGELSGLFKSGTGIWSFAPSITLPIFNWGTNKANLDVATLRKEAQIVTYEAAV 372 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 +A ++V NA + + K L + S+ L + Y+ G + LD+LD ER++ Sbjct: 373 QSAFQDVSNAFVAREQLDKSYAALSKQSRAYNDSLRLISLRYKHGVSNALDLLDAERSSY 432 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 433 GAETALLANQLTRLENLADLYKALGGG 459 >gi|197294866|ref|YP_002153407.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|195944345|emb|CAR56946.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 495 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 125/465 (26%), Positives = 223/465 (47%), Gaps = 45/465 (9%) Query: 18 C-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+YT P PL N L++ D + WW+ ++D L+ LV+ AL Sbjct: 22 CKSVGPDYTLPQHAYVNAPLANHALDDANGA-LVSRDAVPGNWWQLYDDPVLDGLVRDAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALVVANEQGGFSGGAEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGTVG-INVSYELDLFGKLRRGVEAARADSEAVKAAGDLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E R Sbjct: 193 SAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEG--RR 250 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 V P L PI IG A L+R RPD+R E++LA + Sbjct: 251 KVAQYQLAALLARAPADLPKAAAECERLPKLRQPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSVSIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSAAETHRLYA 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R V+ ++ A+ Q+A V L++A+G G+ Sbjct: 429 AGRESFIADLDATRTLTSVQAQVAAAEGQVAADQVRLFLALGGGW 473 >gi|325134753|gb|EGC57390.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M13399] Length = 467 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 123/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAALNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|71734548|ref|YP_275460.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555101|gb|AAZ34312.1| outer membrane efflux lipoprotein, NodT family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 477 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQVVGPDYQPPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + S N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+S Q + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASVQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|46446186|ref|YP_007551.1| putative outer membrane protein, componenet of multidrug efflux systems [Candidatus Protochlamydia amoebophila UWE25] gi|46399827|emb|CAF23276.1| putative outer membrane protein, componenet of multidrug efflux systems [Candidatus Protochlamydia amoebophila UWE25] Length = 489 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/480 (26%), Positives = 234/480 (48%), Gaps = 46/480 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 S ++ L+ C + P Y +P + + P ++ + + +WWE+F+D L KL+ + Sbjct: 3 SCLLLALSSCVLHPPYQQPCLEI-PKKWRTPFEETSTAAN-FRWWEAFDDPILKKLIFES 60 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS--------------------SYASISHRF 108 L+ N + A R K + VR+ FP + + +S + Sbjct: 61 LENNKDLKLALARTAEFKARLGIVRSQFFPQISGVGLASRQRTPTELSGGKTSSGVSSQG 120 Query: 109 IPNLKTNSTGQL------------DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK--- 153 P L T + ++ +++DL+G R SS A L QV + Sbjct: 121 QPGLTPVGTNLIPSPYTNNYRVVAEAAYELDLWG--RVYSSSEAALADLLGQVQARRALV 178 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L+++S + SYI R F +++ ++ Q + K++ EL+ L+F G TS+L + + AE+ Sbjct: 179 LSIVSSVATSYIQMRQFDQQLIVSKQTVTSRKESYELAKLRFEGGLTSELEVKQAAAEVD 238 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 +++ LE + IS L+G+ E + N + L +P G+P++L+ Sbjct: 239 EAIAEVFRLEVLIPQQENLISILIGHSPREIERGL--NINEWPTPLAVP--AGLPSELLE 294 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPDI E+ L + A+IG A++ +PS+SL GS +L + F W + L Sbjct: 295 QRPDIIQAEQGLIAANARIGEARAQYFPSISLTGYFGSESLQLHHLFTSPTRAWQYAANL 354 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF GKI S I A++ + Y +Q+TVLNA KEV+NAL + + ++++ +++V Sbjct: 355 LQPIFTGGKISSGIDVAKAQKRIAYYNYQQTVLNAFKEVDNALIAHQKSRELLEVQKNSV 414 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + K + L+ + Y G+ L++LD ER +++L+ A+ + + V++Y +G G+ Sbjct: 415 VVLKDYLHLAKLQYDNGQTDYLNVLDAERKLFTAQLNLAQAEADVFLTLVNVYKVLGGGW 474 >gi|15677561|ref|NP_274717.1| multidrug efflux pump channel protein [Neisseria meningitidis MC58] gi|7226969|gb|AAF42061.1| multidrug efflux pump channel protein [Neisseria meningitidis MC58] gi|325199694|gb|ADY95149.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis H44/76] Length = 467 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPED 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQVQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|330824330|ref|YP_004387633.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329309702|gb|AEB84117.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 512 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 228/466 (48%), Gaps = 24/466 (5%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + +L VLL C +VGP+Y +P + + +S+ + + D +WW + +D L++L+ Sbjct: 26 VLALSCVLLTACASVGPDYREPPPVDVGSGWSLPLASESQSADLSQWWSALDDPILDRLM 85 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHR-----------FIPNL 112 AL QNL + A RI+ A+ V + P++ A S++ R IP L Sbjct: 86 ATALAQNLDLRHAAARIDEARALRDRVAGEALPTAAAGASVNRRRQSENGPLPVGSIPGL 145 Query: 113 KTNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T D+ W+ DLFG +RR +E + A L + A+ ++ +++++ ++ A Sbjct: 146 DATQTIYDAGFDAAWEADLFGAKRRALEGASARLQATEAEAQGIRMRIVAEVARTWFTAV 205 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + LD ++ +EL L+ G S + A+ ++ + IP ++ R Sbjct: 206 GARYELHAQQATLDTLQQTLELVRLRHALGDASAADVEAAYAQWTAVNALIPDIQARQRA 265 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LLG P L + P+ + +G A+++R RPD+ E++LA S Sbjct: 266 AILSLGVLLGAPPERELALLD---GPLTPSTLRALPVGERAEMLRRRPDVLAAERRLAAS 322 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A ++L+P LS+ G AL+ + F ++ +S P + +FD G++++ IR Sbjct: 323 SADIGVATAELFPKLSIGVGGGFQALSTGDWFDASSSRFSILPLISWRLFDGGRVRAEIR 382 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 E++ ++ + +++ VL A+ + E AL + + + A++ + S + Y Sbjct: 383 AREAAERQAALAYEQAVLAALGDAERALGDYHGGLDTLERRGMALDAARTSYGHAKARYA 442 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++L +R+ + E + A A V LY A+G G++ Sbjct: 443 AGDIALVELLAAQRSLHEAETAAARAHTNAAVQLVALYKALGGGWD 488 >gi|217969441|ref|YP_002354675.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|217506768|gb|ACK53779.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 512 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 118/465 (25%), Positives = 225/465 (48%), Gaps = 24/465 (5%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L VLL C TVGP+Y +P + + +++ + + D +WW + +D L++L+ Sbjct: 27 LALSCVLLTACATVGPDYREPPPVDVGSGWTLPLASESQSADLSQWWSALDDPVLDRLMA 86 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHR-----------FIPNLK 113 AL NL + QA RI+ A+ V + P++ A S++ R IP L Sbjct: 87 TALALNLDLRQAAARIDEARALRERVAGEALPTAAAGASVNRRRQSENGPLPVGSIPGLD 146 Query: 114 TNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T D+ W+ DLFG +RR +E + A L + A+ ++ +++++ ++ A Sbjct: 147 ATQTIYDAGFDAAWEADLFGAKRRALEGASARLRATEAEAQGVRMRIVAEVARTWFTAVG 206 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + LD ++ EL L+ G S + A+ ++ + IP ++ R Sbjct: 207 ARYELHAQRATLDTLQQTFELVRLRHALGDASAADVEAAYAQWTAVNALIPDIQARQRTA 266 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V ++ LLG P L + P+ + +G AD++R RPD+ E++LA S Sbjct: 267 VLSLGVLLGAPPERELALLD---GPLTPSTLRALPVGERADMLRRRPDVLAAERRLAASS 323 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG+A ++L+P LS+ G AL+ + F ++ +S P + +FD G++++ IR Sbjct: 324 ADIGVATAELFPKLSIGVGGGFQALSTGDWFDASSSRFSILPLISWRLFDGGRVRAEIRA 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E++ ++ + +++ VL A+ + E AL + + + A++ + + + Y Sbjct: 384 REAAERQAALAYEQAVLTALGDAERALGDYHGGLDTLERRGMALDAARTTYGHTRTRYAA 443 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++L +R+ + E + A A V LY A+G G+ Sbjct: 444 GDIALVELLAAQRSLHEAETAAARAHTNAAVQLVALYKALGGGWE 488 >gi|194099136|ref|YP_002002221.1| MtrE [Neisseria gonorrhoeae NCCP11945] gi|193934426|gb|ACF30250.1| MtrE [Neisseria gonorrhoeae NCCP11945] Length = 467 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + + L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSVRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|237800664|ref|ZP_04589125.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023523|gb|EGI03580.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. oryzae str. 1_6] Length = 487 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 124/477 (25%), Positives = 229/477 (48%), Gaps = 38/477 (7%) Query: 2 NILRAI-FSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESF 56 ++R I L IVLL+ C VGP+Y KP P F + + D + WWE + Sbjct: 13 GLIRPIGLGLCIVLLSACAVGPDYQKPSAAA-PVHFKAAAGWRAATPSDAMVKGAWWEVY 71 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYAS 103 D LN LV+ N T+ Q + A+ + S R FP+ + S Sbjct: 72 GDPQLNALVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGTGTS 131 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 S + ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ Sbjct: 132 NSGNSVSGIRNSYNAQLGVSWEADIWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQ 191 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R E+ + ++ Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 192 NYLQLRVIDEQKRLLESTVEAYQRSLNLTRNQYRAGISGSDAVAQAQTQLKSTQADLIDL 251 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDI 278 + I+ L+G EF + IP I G+P+ L+ RPDI Sbjct: 252 AWQRAQFENAIAVLMGMAPAEF---------SLAATTSIPQLPQIPPGLPSQLLERRPDI 302 Query: 279 RYQEKKLADSVAKIGIAKSDLYP--SLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIF 335 E+ + + A IG+AK+ YP +LS++G + T N N WS GP+L + +F Sbjct: 303 AAAERSVMAANANIGVAKAAYYPDFTLSMSGGYNSSTFANWISLPNRFWSVGPQLAMTLF 362 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + + R+E+ + +++TVLN +EVEN L + ++ Q A+ + Sbjct: 363 DGGRRTAEVDRSEAVYDQTVAQYRQTVLNGFQEVENYLIQLKVYEQEAAVRQEALVSARD 422 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 S+ L+ Y+ G LD+++++ E LS+ + +L S V L A+G G++ Sbjct: 423 SLRLTSNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWD 478 >gi|319763533|ref|YP_004127470.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|317118094|gb|ADV00583.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] Length = 549 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 221/465 (47%), Gaps = 24/465 (5%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L VLL C VGP+Y +P + + +++ + + D +WW + +D L++L+ Sbjct: 27 LALSCVLLTACAAVGPDYREPPPVDIGSGWTLPLASESQSADLARWWSALDDPILDRLMG 86 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRF-----------IPNLK 113 AL QNL + QA RI+ A+ V D P S+ S++ R IP + Sbjct: 87 TALAQNLDLRQAAARIDEARALRDRVAGDQMPTVSAGTSVNRRGQSKNGPLPVGSIPGMD 146 Query: 114 TNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T D+ W+ DLFG +RR +E + A L + + ++ +++++ ++ A Sbjct: 147 ATQTIYDAGFDAAWEADLFGAKRRALEGASARLQATEVEAQGVRMRIVAEVARTWFTAVG 206 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + LD ++ +EL L+ G S + A+ ++ + +P ++ R Sbjct: 207 AGYELHAQQATLDTLQQTLELVRLRHALGDASAADVEAAYAQWTAVNALLPDIQARQRAA 266 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V + LLG P H + P + +G ADL+R RPD+ E++LA S Sbjct: 267 VLGLGVLLGAPPE---HELALLDGPLAPCTLRALPVGERADLLRRRPDVLAAERRLAASS 323 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG+A ++L+P LS+ G AL+ N F ++ +S P + +FD G++++ IR Sbjct: 324 ADIGVATAELFPKLSIGVGGGFQALSTGNWFDASSSRFSILPLISWRLFDGGRVRAEIRA 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E++ Q+ + +++ VL A+ + E AL + + + A++ + S + Y Sbjct: 384 REAAEQQAALAYEQAVLAALGDAERALGDYHGGLDTLERRAMALDAARTSYGYAKARYAA 443 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++L +R+ + E + A A V LY A+G G+ Sbjct: 444 GDVALVELLAAQRSLHEAETAAARAHTSAAVQLVALYKALGGGWE 488 >gi|295700862|ref|YP_003608755.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295440075|gb|ADG19244.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 522 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 125/470 (26%), Positives = 226/470 (48%), Gaps = 44/470 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-------INIDTLKWWESFNDTSLNKL 64 + L A VGP YT P L+ + G + +N T+ WW+ ++D LN L Sbjct: 27 VALNACINVGPNYTLPKQALVNAPLATGAIEGADPTLTSNLNTPTV-WWKLYDDPVLNSL 85 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFI-----PN 111 V+ AL+ N + A + ++E + +A S AS++ +F+ P Sbjct: 86 VEQALKSNTDLRVAAANLARSREALGVAQAQGGFSGNASVAIQRAQESAEQFLLFEKLPV 145 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G ++ ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ SY++ Sbjct: 146 ANLGDMG-INVSYEIDLFGKLRRGVEAAAADTEAVEAAGDLARITVVADVVRSYVEQCSA 204 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E + IA Q L L K+ ++LS G ++ ++ + +++++ +DIP ++ Sbjct: 205 AEELRIAQQSLALQKQRVDLSRRLRDAGRGNQTAVTSGQTQVETLTADIPRYTARRKIAQ 264 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LL ++ + + + P ++ PI IG A L+R RPD+ E++LA + A Sbjct: 265 YRLAMLLAQAPSQLPPAVL--ACDRLPQIHQPIPIGDGAGLLRRRPDVHEAERQLAAATA 322 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IG+A LYPS+S+ S T P T W FGP + F + +R AE Sbjct: 323 RIGVATGALYPSISIGASAGFTGILEDIPTQPTARWGFGPLISWN-FPANGARQRVREAE 381 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINED--------KKIVTKLQHAVELHKKSMSLS 400 +S+Q + VL A++E E L + D + + +Q A E H+ Sbjct: 382 ASSQVALAKFDGVVLGALRETETNLATYASDYARAEALRAALKSAVQSADETHRL----- 436 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR GR S + LD R + L+ A+ Q+A V+L++++G G+ Sbjct: 437 ---YRAGRESFIADLDATRTLTAAKSQLAAAEGQVAVDQVNLFLSLGGGW 483 >gi|117920439|ref|YP_869631.1| outer membrane efflux protein [Shewanella sp. ANA-3] gi|117612771|gb|ABK48225.1| outer membrane efflux protein [Shewanella sp. ANA-3] Length = 495 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 232/461 (50%), Gaps = 36/461 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF-------SIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +AGC +GP+Y +P + +LP Q+ + N+ + L W + D L L++ Sbjct: 41 VAGCAMGPDYQRPEL-VLPNQYQAQMLSQTTAEQGNVKEVSALSWRHFYQDPVLISLIEH 99 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS----- 122 AL NL + A R+ AA+ + V + L+P S+ + +L + +T S Sbjct: 100 ALANNLDLQMAQSRLLAARSKMTVVDSALWPE--VSVKAGYERSLDSGATSTNPSPSTTL 157 Query: 123 ------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G RR E+++A+ S ++ + +++IS + Y + ++R S Sbjct: 158 DLGGAVSWELDLWGANRRASEAAMADYLSEVEKLRLTYVSLISDIASRYYEWLDIEQRYS 217 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + L +K ++++ L+ G S L + + E E++S + +PTL+ + ++ + Sbjct: 218 VSIDTVGLRQKELDIAKLRHANGVISGLDVRQAEVELQSTKVTLPTLDYERKYKINQLHI 277 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG E+ Y N+ +P +N G+P++L+ RPD++ E+++ + A++G Sbjct: 278 LLG----EY-DYALPSPQGLPENMGLPYELNTGVPSELLTLRPDVKIAEQQMIAANAEVG 332 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IAK+ +P +++G +D + F WS + PIF++GKI + A + Sbjct: 333 IAKAAFFPKFTISGVYGRENDHLKDIFDSNGVTWSLLGGISAPIFNRGKIAAEYDIATEA 392 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A++ ++++ VL A +V +AL ++ ++ + + VE L+ + Y+ G + Sbjct: 393 AKQSMLSYRNVVLTAYFDVNDALNNLKRAQEAIKAQKELVESSSAYARLARLRYQNGVAT 452 Query: 411 LLDILDIERATAKVEVDLS--IAKRQLAKSYVDLYIAIGSG 449 LD++D +R ++ S + +QLAK + LY A+G G Sbjct: 453 SLDLMDAQRQLFSAQLAYSEILRDKQLAK--IALYRALGGG 491 >gi|307726430|ref|YP_003909643.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586955|gb|ADN60352.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 503 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 220/458 (48%), Gaps = 27/458 (5%) Query: 17 GC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIAL 69 GC VGP Y+ P + PL ++ D WW+ ++D LN+LV AL Sbjct: 27 GCMNVGPNYSLPKDALVNAPLANAPIEGADTALTSRADVPAVWWKLYDDPVLNRLVDEAL 86 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------IPNLKTNS 116 Q N + A + ++E + +A S AS + + +P + Sbjct: 87 QSNTDLRVAAANLARSREALGVAQAQGGFSGKASAAFQRAQESAEQYLLTEKLPVVNEGD 146 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G + ++IDLFG+ RR +E++ A+ ++ A D+A+ V++ ++ +Y++ E ++ Sbjct: 147 VG-ISVAYEIDLFGKLRRGVEAAQADAEAVQAAGDLARTTVVADVVRAYVEQCSAAEELN 205 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA Q L L ++ +++S G ++ + + + ++ ++ +DIP ++ + ++ Sbjct: 206 IAQQSLALQRQRVDVSRRLRDAGRGNQTEVTRGQTQVDTLSADIPRYTARRKIAQYRLAA 265 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LL ++ + + P + PI +G A L++ RPD+R E++LA S A+IG+A Sbjct: 266 LLARAPSDLPPAVL--ACEKLPRIRQPIPVGDGAALLKRRPDVREAERQLAASTARIGVA 323 Query: 296 KSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 LYP++S+ S LT ++ W FGP L F + +R A++S+Q Sbjct: 324 TGALYPTVSIGASAGLTGVLEDLGTSPTARWGFGP-LISWTFPANGARGRVREAQASSQV 382 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + VL A++E E +L + D L+ A++ +S + YR GR S + Sbjct: 383 ALARFDGVVLTALRETETSLATYASDYARAESLRAALKSATQSADETHRLYRAGRESFIS 442 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD R + ++ A+ Q+A V+L++A+G G+ Sbjct: 443 DLDATRTLTSTKAQVAAAEGQVAIDQVNLFLALGGGWE 480 >gi|257487819|ref|ZP_05641860.1| outer membrane efflux protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985322|gb|EGH83425.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008534|gb|EGH88590.1| outer membrane efflux protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 489 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 121/472 (25%), Positives = 223/472 (47%), Gaps = 39/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQTPSMAA-PAQFKAAEGWRAATPSDAMAKGAWWEVYRDPQLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+AK+ YP +L+ G + T N N WS GP+L L +FD G+ Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRR 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ T Q A+ + S+ L+ Sbjct: 370 TAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEATVRQEALVSARDSLRLT 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G+N Sbjct: 430 NNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIAS-VQLIAALGGGWN 480 >gi|325136642|gb|EGC59242.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M0579] Length = 483 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 123/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 93 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSL---SGGNVSSSYKVGLGAASYE 149 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 150 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 209 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 210 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 269 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 270 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 326 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 327 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 386 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 387 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 446 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 447 YAAEGAALSAQLTRAENLADLYKALGGG 474 >gi|229590388|ref|YP_002872507.1| outer membrane component of multidrug efflux system [Pseudomonas fluorescens SBW25] gi|229362254|emb|CAY49156.1| outer membrane component of multidrug efflux system [Pseudomonas fluorescens SBW25] Length = 471 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 133/467 (28%), Positives = 230/467 (49%), Gaps = 35/467 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKL 64 SL ++ L+ C VGP+Y K P + ++K D K WW+ F D +LN+L Sbjct: 9 SLLVLALSACAVGPDY-KTQTPEAANITAAADAKQ---YDHAKFEGIWWQQFEDPTLNQL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHR--FIPNLKTNSTGQ- 119 V +LQ N + A R+ AA+ D P+ S AS IP T Sbjct: 65 VTQSLQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDQGKGQIPGQTTRRVKTE 124 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR--HFK 171 LD W++DLFG+ +R++E++ A+ +A A + ++ +I++L+ +Y R + Sbjct: 125 RYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTLIAELVDAYGQLRGAQLR 184 Query: 172 ERISIAHQILDLYKKNIELSHLKFT---QGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ERI+ LD K E + + G +L + + +A + ++E+ +P L+ Sbjct: 185 ERIA-----LDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQVR 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + I+TLLG + + + P + + IG P L++ RPDI E+KLA + Sbjct: 240 ERNRIATLLGQRPDKLSVDLGPKD---LPAIAKALPIGDPGQLLQRRPDILSAERKLAAA 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIR 345 A+IG+AK+DL+P +SL+G + T S G + W+ GP + FD G +++ +R Sbjct: 297 TARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLR 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ A ++++ VL A++E ENA + + ++ + L E + + L+ I YR Sbjct: 357 GADAEADGALASYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYR 416 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +G L +LD +R E + A+ L + V +Y A+G G+ P Sbjct: 417 EGTVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWKP 463 >gi|239999435|ref|ZP_04719359.1| hypothetical protein Ngon3_08116 [Neisseria gonorrhoeae 35/02] gi|240081308|ref|ZP_04725851.1| hypothetical protein NgonF_08375 [Neisseria gonorrhoeae FA19] gi|240123961|ref|ZP_04736917.1| hypothetical protein NgonP_08483 [Neisseria gonorrhoeae PID332] gi|268595255|ref|ZP_06129422.1| multidrug efflux pump channel protein [Neisseria gonorrhoeae 35/02] gi|268597412|ref|ZP_06131579.1| multidrug efflux pump channel protein [Neisseria gonorrhoeae FA19] gi|268682590|ref|ZP_06149452.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID332] gi|293398651|ref|ZP_06642829.1| OMF family outer membrane factor [Neisseria gonorrhoeae F62] gi|268548644|gb|EEZ44062.1| multidrug efflux pump channel protein [Neisseria gonorrhoeae 35/02] gi|268551200|gb|EEZ46219.1| multidrug efflux pump channel protein [Neisseria gonorrhoeae FA19] gi|268622874|gb|EEZ55274.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID332] gi|291611122|gb|EFF40219.1| OMF family outer membrane factor [Neisseria gonorrhoeae F62] gi|317164683|gb|ADV08224.1| hypothetical protein NGTW08_1257 [Neisseria gonorrhoeae TCDC-NG08107] Length = 467 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 122/445 (27%), Positives = 218/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER + Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERISYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|313667900|ref|YP_004048184.1| outer membrane efflux protein [Neisseria lactamica ST-640] gi|313005362|emb|CBN86796.1| outer membrane efflux protein [Neisseria lactamica 020-06] Length = 483 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 122/453 (26%), Positives = 216/453 (47%), Gaps = 30/453 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 34 LSACTMIPQYGQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 92 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------------- 121 + A ++ + R +L P+ N + G LD Sbjct: 93 LRTAVLNSEIYRKQYMIERNNLLPT--------LAANANGSRQGSLDGGNVSSSYNVGLG 144 Query: 122 -SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +++DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A + Sbjct: 145 AASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQR 204 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +L + +LS L++ G S ++L + EA I+S ++D +S + ++TL+ Sbjct: 205 VLKTREATYKLSELRYKAGVISAVALRQQEALIESAKADYANAVRSREQARNALATLINQ 264 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P + L F + G+ ++++ +RPDIR E L + A IG A++ Sbjct: 265 PIPDDLPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAF 321 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS+ L GS+ F WSF P + LPIF G K+N+ A+ Q Q + Sbjct: 322 FPSIRLTGSVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDAAKLRRQAQIV 381 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ V +A ++V NAL + + K L K+++ L + Y+ G LD+LD Sbjct: 382 AYEAAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLD 441 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER++ E A+ A++ DLY A+G G Sbjct: 442 AERSSYSAEGAALSAQLTRAENLADLYKALGGG 474 >gi|325923516|ref|ZP_08185166.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325546013|gb|EGD17217.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 486 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 135/476 (28%), Positives = 225/476 (47%), Gaps = 42/476 (8%) Query: 8 FSLFIVL--LAGCT-VGPEYTKP-----HMPLLPTQFS-IGNSKNLINID-TLKWWESFN 57 F L VL L CT VGP Y P P F GN + +WW + Sbjct: 9 FGLAAVLTALTACTTVGPNYAVPDDSAYQRPAANAAFGDTGNDQVHPGAPLPARWWALYQ 68 Query: 58 DTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYA 102 D L+ L++ AL+ N+ + A R A E L RA + S+ A Sbjct: 69 DPMLDGLIEQALRDNVELKVAGANLRRAAAVYEQALDAGGFDYEVEAGVSRAQV--SAEA 126 Query: 103 SISHRFIP--NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 + +P NL + G+ ++ DLFG+ +R E++ AN A A +D+A++NV ++ Sbjct: 127 FLQEEKLPVFNL---ADGKFGVSYQFDLFGKLQRGAEAAQANTQVAQAAIDLARVNVAAQ 183 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + SY++ H + +A L L +++ +++ G + L + A++ +E+ + Sbjct: 184 VAGSYVEICHANHELHVAEHSLQLQQRSRDITQRLIDAGRGTPPDLARATAQVAMLEAAL 243 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 P L + + ++ LLG E + S P L PI IG L+ RPD+R Sbjct: 244 PPLHARRQAAGYQLAALLGKTPGEVPAGVD--SCAHAPALQQPIPIGDGRALLARRPDVR 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIF 335 E++LA + A+IG+A ++LYP + L GSI T D P TH WSFGP + + Sbjct: 302 QAERRLAAATARIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSFGPLISWTLP 359 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G ++ IR E+ A + TVL A++EV+ L+ +D + L+ A + + Sbjct: 360 SSGA-RARIRATEAGADAALAQFDHTVLQALREVQTTLSRYAQDLDRLHLLEQAQQQAEL 418 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + S + Y+ GR L LD ER A ++ L+ A+ Q+++ + L++A+G G+ Sbjct: 419 ASSQNRRLYQGGRTPYLSSLDAERTLATADMTLANAQAQVSQDQLQLFLALGGGWE 474 >gi|308389832|gb|ADO32152.1| multidrug efflux pump channel protein [Neisseria meningitidis alpha710] gi|325201634|gb|ADY97088.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis M01-240149] gi|325208631|gb|ADZ04083.1| multiple transferable resistance system protein MtrE [Neisseria meningitidis NZ-05/33] Length = 467 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 123/448 (27%), Positives = 220/448 (49%), Gaps = 20/448 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKI-------- 126 + A ++ + R +L P+ A+ + +L S G + S +K+ Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSL---SGGNVSSSYKVGLGAASYE 133 Query: 127 -DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L Sbjct: 134 LDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTR 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P + Sbjct: 194 EETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDD 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L F + G+ ++++ +RPDIR E L + A IG A++ +PS+ Sbjct: 254 LPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIR 310 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G++ F WSF P + LPIF G K+N+ A+ Q Q + ++ Sbjct: 311 LTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA 370 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V +A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 371 VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSS 430 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 431 YAAEGAALSAQLTRAENLADLYKALGGG 458 >gi|71907785|ref|YP_285372.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] gi|71847406|gb|AAZ46902.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] Length = 475 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 30/459 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIAL 69 L+GC +GP+Y +P LLP+ F + I +WW FND +LN LV AL Sbjct: 18 LSGCAIGPDYLRPSA-LLPSLFGEAKPAETVAIAPNPAIDPRWWTLFNDATLNDLVDQAL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFI----------PNLKTNS 116 N ++ QA R+ A+ A FP S AS + + P ++ Sbjct: 77 SNNASLRQAIARVEQAEAVAREAGASFFPEIDGSAASSNTKASTKTATYVASQPAIRHAR 136 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + L + +++D++G+ RR E++ A L ++ D ++ V + +Y+ R + +++ Sbjct: 137 SAGLSTSFELDVWGRVRRANEAAQATLLASQYSRDSIRITVAGLVASNYLALRAYDAQLA 196 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + L + +++L + G S L + E + + + I + + H ++ Sbjct: 197 LTSETLKSREDSLKLVKTRVDAGLVSPLDGYQAEGALAAAQVQIAEQRRQRALAEHQLAL 256 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G P + +Q + DLI RPD+R E +L + A IGIA Sbjct: 257 LTGNPELKLAAGDLRQLPLPPLPPAGLPS-----DLIEGRPDVRQAEAELIATNAGIGIA 311 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ +P +L GSI + F + WS G +PI D G+ + + +A++ Q Sbjct: 312 KAGYFPKFTLTGSIGSESKILSDLFSAGSGTWSLGLSALMPILDFGRTSARVDQAKALNQ 371 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + I WQ ++ A KEV +AL S+ ED + T V+ +K++ +S + Y G L Sbjct: 372 QSLIAWQNSLQTAYKEVRDALVSLREDGEAETAQNIRVDSARKALDVSRLRYEAGHAGYL 431 Query: 413 DILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGY 450 ++LD +R T V I RQ + +DL+ A+G G+ Sbjct: 432 EVLDAQR-THNDAVTTMITMRQARLGAAIDLFKALGGGW 469 >gi|182679452|ref|YP_001833598.1| RND efflux system outer membrane lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635335|gb|ACB96109.1| RND efflux system, outer membrane lipoprotein, NodT family [Beijerinckia indica subsp. indica ATCC 9039] Length = 533 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 129/491 (26%), Positives = 223/491 (45%), Gaps = 66/491 (13%) Query: 15 LAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQ 70 L GC+VGP++ P P Q + G+ ++ WW + D LNKL + + Sbjct: 27 LGGCSVGPDFQSPAFDAPKSWPQTAAGHGDGRPTPQQIEPDWWLIYRDPVLNKLENMVAE 86 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN--------LKTNSTGQ 119 NL I A R+ ++ + FPS ++ S+ R PN L+ + GQ Sbjct: 87 ANLDIKAAAHRLAQSRAARQVAASSQFPSINSNASYARERASPNGVLGLLGTLEQETPGQ 146 Query: 120 L---------------------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 + D+ W++DL+G RR +E + A+ + V Sbjct: 147 IANGTQGFGPARLPGLAGQPFNLFQYGIDASWEVDLWGHVRRQVEGADADTAAMADHVRD 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + ++ YI R + +I + Q +D+ + +EL+ ++FT GAT+ L + A+ Sbjct: 207 VLVTIFAETAHDYIQLRSIQAQIVLTKQNIDIARHGLELTRMRFTNGATTTLDVANASAQ 266 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL----YIP----- 262 + +IE+ +P LE R H I+ L FL + ++ P L IP Sbjct: 267 LATIEAYLPALE---REEGHLINAL------SFL--VDEEPRALSPMLGARRQIPMAPPK 315 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG 319 I +G+PA+L RPDIR ++L +VA IG+A ++ YP ++L+GS+ ALT Sbjct: 316 IPMGVPAELAERRPDIRMATERLHAAVANIGVAVAEFYPRITLSGSLDIQALTFSGLGTW 375 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + + GP + +PIF G+++ + +E I ++ TVLNA E++NAL + Sbjct: 376 ASRQYGLGPTVSIPIFQGGRLRGQLELRNEQQKEAAILYRRTVLNAWHEIDNALIDYHVA 435 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + L A + ++ +++ S Y QG L++L + + L A A + Sbjct: 436 QARRASLAEATKQNEIALTASQTQYTQGSSDFLNVLTAQNRLLSTKSQLLQASADTAIAV 495 Query: 440 VDLYIAIGSGY 450 LY A+G G+ Sbjct: 496 AQLYKALGGGW 506 >gi|300693554|ref|YP_003749527.1| rnd efflux transporter, outer membrane lipoprotein [Ralstonia solanacearum PSI07] gi|299075591|emb|CBJ34884.2| RND efflux transporter, outer membrane lipoprotein [Ralstonia solanacearum PSI07] Length = 482 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 121/453 (26%), Positives = 208/453 (45%), Gaps = 22/453 (4%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 L C + P Y P + Q + + + N+ + WWE F+D ++ +LV++A + Sbjct: 20 LCACALQPSYQAPQAVAATGWQAELPHGGKVDNL--VGWWEHFDDPAVAELVRMAEAGSP 77 Query: 74 TILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDS 122 T+ +A RIN A+ + S A +PS S ++ + L T + D+ Sbjct: 78 TLAKAVARINGARATLASSNAGAWPSLTGSGSVTRAKSAVALGGATVSGLTTTRSASADA 137 Query: 123 DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+IDLFG QR ESS A LD+ A++++ +++ Y+ R ++ Q Sbjct: 138 SWEIDLFGKQRSARESSQAQLDARIDDWHDARVSLAAEVADDYVQYRACRQLARAYAQSA 197 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y + + G +S +A S + + V ++ L G Sbjct: 198 ASYAQTENATRAAVGAGMSSASDGYLAQASTASARATATQQNVACEELVKSLVALTGADE 257 Query: 242 TEFLHYMQKQSNNFQPNLYIPINI---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + P L P +PADL+R RPD+ E+ LA + A IG A++D Sbjct: 258 PTLRGVIDR---TGAPELPEPAAFRVTSLPADLVRQRPDLASSERALASTYADIGQARAD 314 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +PSLSL+GS+ ++ N + WSFGP L +P+FD GK ++ + A++S Q + Sbjct: 315 RFPSLSLSGSLTISATN-LAAPTSSWSFGPSLSVPLFDAGKRRAAVDSAQASYDAQLAAY 373 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + VL A+KEVE AL ++ + + A E ++ + N+R G +LL + Sbjct: 374 RSAVLTAVKEVEVALVDLDGAARRSDDARRAAEQYRLYERAAQANWRAGFDTLLTLEQAR 433 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ E+ +R +S++ LY A+G G+ Sbjct: 434 RSLTSAEITHIELQRDRVRSWIALYKALGGGWQ 466 >gi|163801369|ref|ZP_02195268.1| putative outer membrane protein [Vibrio sp. AND4] gi|159174858|gb|EDP59658.1| putative outer membrane protein [Vibrio sp. AND4] Length = 550 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 133/491 (27%), Positives = 255/491 (51%), Gaps = 53/491 (10%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSL 61 ++ +L ++ L+ CT +GP+Y P LP+ +S+ NS K WW+ FND +L Sbjct: 9 SLATLSVLGLSACTTLGPDYIHPKQSTLPSNWSVENSAQDTQQSDQKLQQWWQQFNDPTL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSY---ASISHRFIPNLKTNST 117 N+LVK+A QQNL + A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 69 NQLVKMASQQNLDLEAAGLRIVQAR-SLLGISTGLQYPQAQTVSGNVARAYVNDQGVNNA 127 Query: 118 G-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 D+ W++D++G+ R+IES+ A ++ A + + +++ +YI+ R F+ERI Sbjct: 128 ALSFDAGWEMDIWGKYARNIESAEAGYYASIASYHDIMVTIAAEVARNYINYRTFQERIL 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + +++ ++ + ++ ++F G ++L + + + ++ + ++ +P+LE + + + ++ Sbjct: 188 LSRRNIEIQQRVVNITQVQFDSGNVTELDVQQAKNQLFNTKATLPSLEIAMKQSRTALAL 247 Query: 236 LLGYPATEFLHYMQKQ--------------SNNFQPNL-------YIP----INIGIPAD 270 LLG E +Q + S+ +P L +P ++ I A+ Sbjct: 248 LLGTLPEEMERLLQSEGFAQRMANYESHFKSSGRKPALSGGDERSIVPRPPQLDKKIDAN 307 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF---- 326 L+ RPD++ E + AKIGIA++ LYPS SL GSI + D++ P + +SF Sbjct: 308 LVMRRPDLQVSEMQARAQSAKIGIAETALYPSFSLFGSIGI--DSTVP-EGSSFSFSDSL 364 Query: 327 ----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---ED 379 GP IF G++K+NIR ++ QE + + VL A+ EV +AL + N E Sbjct: 365 TMVAGPAFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTSALEAYNLYLEQ 424 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 K + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A Sbjct: 425 KSL--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQV 481 Query: 440 VDLYIAIGSGY 450 V LY ++G G+ Sbjct: 482 VALYKSLGGGW 492 >gi|189424457|ref|YP_001951634.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] gi|189420716|gb|ACD95114.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] Length = 461 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 124/456 (27%), Positives = 228/456 (50%), Gaps = 24/456 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F ++L+ GC+VGP+Y +P + P Q+++ K ++ +WW+ F D L+ L++ Sbjct: 5 MFVTMLLLVCGCSVGPDYVRPDVKA-PDQWNV-EYKAAADLANTQWWKLFGDKVLDDLIE 62 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK--TNSTGQ----- 119 A++ NL + AT +++ + + R+ FP IS F P +ST Q Sbjct: 63 TAVRGNLDLKSATAKVDQYLGVLDTTRSQYFPQ----ISAGFNPGATHTGSSTTQSYQAT 118 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +++ W++DL+G+ RR E++ A + + A + V+S + YI R ++ IA Sbjct: 119 VNATWELDLWGKIRRSSEAAQAQIVGSEAGRRAVIMTVVSNVASGYITLRGMDRQLEIAR 178 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Y ++++L L+F G S+L L + E+ ++ IP+ E R + IS LLG Sbjct: 179 DTEKAYAESLKLFQLRFKYGTISQLELSQAESNYEAARQAIPSYESLVRQQENLISLLLG 238 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 K + P I G+P+ L+ RPDI E+ L + A+IG+AK+ Sbjct: 239 RAPGPIPR--GKTIDELIPP---GIPAGLPSLLLERRPDIIQAEQNLIAANAEIGVAKAA 293 Query: 299 LYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P +SL G++ ++ + PG WS G +L P+F+ G+ +++AE+ Q+ Sbjct: 294 YFPKISLTGALGVSSGDISRLFVPGAGI-WSAGAQLAQPLFNFGQTAGQVKQAEAQQQQA 352 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +Q+T+L A +EVE+AL + ++ + + V L+ + + G S L + Sbjct: 353 LYQYQQTILTAFREVEDALIKTTKGREQLEAQRRQVASLSDYDRLARLQFEAGTSSYLQV 412 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ ++D + L S + +Y A+G G+ Sbjct: 413 LDADRSLFTGKLDKTKTHYDLLVSLISVYKAMGGGW 448 >gi|307296067|ref|ZP_07575898.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306878238|gb|EFN09460.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 466 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 125/461 (27%), Positives = 218/461 (47%), Gaps = 37/461 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC GP Y +P + L QF+ S D WW FND L+++V AL QNL + Sbjct: 14 GGCATGPAYHRPDVRL-TEQFAGQTSFQEAKKD---WWREFNDPLLDRIVDRALAQNLDL 69 Query: 76 LQATERINAAKENILSVRADLFP----------------SSYASISHRF-IP-NLKTNST 117 R+ A+ + A L P SS ++ R +P N + Sbjct: 70 AVVAARVAQARAAAGAAGAALLPTLNGGASAAANRQSTHSSIGGVAQRLGMPRNYEQYDV 129 Query: 118 GQLDSDWKIDLFG----QRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G + W+IDLFG +RR + A NL A + A+L+V+++++ +Y++ R + Sbjct: 130 GA-QASWEIDLFGGLSGERRAARAEYAGNL----ADQEAARLSVVAEVVDAYLNMRGLQA 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++++A + + + ++L + QG ++ L ++ E + +E+ I L S ++ Sbjct: 185 QLAVAEKQVGIESSLVDLIRQRVGQGIAAERELNRVLGEQRGVEASIAPLRASIAAQMNR 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G A + P +P PA+L+R RPDI E++L + A+I Sbjct: 245 LDILMGQQAGTGRAELSVAVAT--PGALLPRGDANPAELLRRRPDIVAAERRLVAANARI 302 Query: 293 GIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A ++ YP L+L+G I+L N F G + S G + +FD G+I +++ +A Sbjct: 303 GAAMAEYYPHLTLSGLFDVISLGTGNLFTGGSVQASGGAGIRWRLFDFGRIDADVAQARG 362 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 E ++ +VL A ++VE AL ++E + + KL+ V + + Y G Sbjct: 363 REAEALARYRSSVLRATEDVETALVQLSEGRVQIDKLEQQVAALTIARDQARHAYENGAV 422 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LLD+LD ++A L A+ +A++ V A+G GY Sbjct: 423 ALLDVLDADQAVLNASSRLEQARAGVARASVAAIRALGGGY 463 >gi|148547646|ref|YP_001267748.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148511704|gb|ABQ78564.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 487 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 129/471 (27%), Positives = 226/471 (47%), Gaps = 45/471 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTL-KWWESFNDTSLNKLVKIALQQN 72 AGC VGP+Y +P+ PL S + D L WW+ F D L+ LV A+ QN Sbjct: 17 AGCMVGPDYKQPNAPLAHHYISSAGLAATPGARADKLDNWWDGFGDPLLSTLVTEAIGQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--GQ----------- 119 L + QA R+ A+ + S A L PS AS++ + + ++ T GQ Sbjct: 77 LELAQAQARVVQARATLGSATAALVPS--ASVNGQAARSRQSIETPLGQVLNSTPGYDRY 134 Query: 120 -------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD+ W+IDLFG RR+ E+++A + A +L + ++ YI R + Sbjct: 135 GSSYELNLDASWEIDLFGGLRRNREAAMAQYQAYEAGAVATRLAIAAQTADIYITVRGLQ 194 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++IA ++ + L +G + + + E E+ +++ IP L + ++ Sbjct: 195 ARLAIAQAQARTQRELLGKVKLLNQKGLAADYEVRQTEGELSQVDATIPGLRANLDAALN 254 Query: 232 NISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +LG P T H Q + + P +IG PA L+R RPD+ E+++ + A Sbjct: 255 ALDVVLGSSPGT---HRTQMAAPSHIPKAPQLSDIGEPAQLLRRRPDLIAAERRVMSANA 311 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A S+ YP+ SL G+ + + F G + + L +FD G+I + I++A Sbjct: 312 LIGSAISEYYPTFSLGALVGAASTSGGQFFTGGASQSAAFLGLRWRLFDFGRINAEIQQA 371 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL------SM 401 + E +++ VL A ++VE AL+++ V + Q A L + SL S Sbjct: 372 KGREAEALAYYRQAVLGASQDVETALSAL------VNRQQQAQSLGEGEASLAQARQSSF 425 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y++G SLL++L+ ++ + ++A+ + A++ + Y A+G G++P Sbjct: 426 AAYQKGAASLLNVLNADQQLLRASDSRAVAQTEAARAAIATYRALGGGWSP 476 >gi|223938890|ref|ZP_03630777.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223892443|gb|EEF58917.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 502 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 115/475 (24%), Positives = 227/475 (47%), Gaps = 34/475 (7%) Query: 7 IFSLF--IVLLAGCTVGPEYTKPHMPLLPTQFSIGN------SKNLINIDTLKWWESFND 58 +F+L ++L GC VGP+Y +P +P ++ ++ ++ WWE F D Sbjct: 16 LFALMGATLVLGGCMVGPDYKRPEATRIPATYAGATNHEWKVAEPRAHLPKGNWWEMFGD 75 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPN---- 111 LN+L A N + A R+ A+ R+ LFP+ S R PN Sbjct: 76 PELNRLEAEAASANQQLKAAFSRLEEARAITDITRSGLFPNVALSGEYTRQRTSPNQPSV 135 Query: 112 LKTNSTGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 L N+ G+ L+ ++++DL+G+ RR +ES+ A + + +L + +++ Sbjct: 136 LSGNAIGKPSTFNDFLVPLNLNYEVDLWGRVRRSVESARAQESATADDLGTIQLIIQAEV 195 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ R +I + +++K+++L+ + G S L + + E ++ + +P Sbjct: 196 AADYVSLRSLDTEYAIVRSTIGVFRKSLDLTLDRRAGGIVSDLDVAQAETVYRTARAQLP 255 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + H ++ L+G PA+ F + +++ P + P G+P++L+ RPDI Sbjct: 256 AIALQRAQFQHALAVLIGKPASSFA--IPERALRATPPVIPP---GLPSELLERRPDIAA 310 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN---THWSFGPKLYLPIFDK 337 E+++A + A IG+AK+ +P++ LNG L N+ +N WS GP L LPIF+ Sbjct: 311 TERRMAAANASIGVAKAAFFPTVRLNGMAGLESVNAGTVFNWSSRFWSVGPSLTLPIFEG 370 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +++N+R +++ E +++ VL A ++VE+ L++ + A++ + + Sbjct: 371 GALRANLRFTKATYDETVADYRQIVLTAFRDVEDNLSAQTLLASEYEEQAGALQSANRQL 430 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ Y G + L++ + +E + + Q + V L A+G G+ P Sbjct: 431 EIANDRYHGGLVTYLEVATAQNLVLGLERTVVQLRGQQLVTAVALVQALGGGWQP 485 >gi|326385759|ref|ZP_08207388.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] gi|326209738|gb|EGD60526.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] Length = 478 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 223/459 (48%), Gaps = 30/459 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLVKI 67 C VGP+Y H + ++ T +WW + D L++LV+ Sbjct: 23 CAVGPDY---HASRPAPAAAAPFRGAALDTGTGPAFAAAPVEERWWSLYKDPMLDRLVED 79 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKT---------NS 116 AL N + A R++ A+ + A P++ +S +P+++T Sbjct: 80 ALAANTDLRVAAARVDRARALLRDAHAAQLPTTGIDVSAQRERVPSIQTIPGLPRERWAY 139 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L +++DLFG+ RR IE++ + +A A D +L VI+ + +Y D ER+ Sbjct: 140 DGGLSLSYEVDLFGRVRRGIEAARGDAQAAQADADAMRLAVIADTVRAYFDVTTSAERVK 199 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + + L ++I ++ + G + +L L+++ A + IP+L+ + ++T Sbjct: 200 VAEETVALLDRSIRITGARVDVGRSDRLDLIRVTALRDQQAATIPSLKADREAALLRLAT 259 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G E + ++ P+L PI +G A L+ RPD+R E++LA A+IG+A Sbjct: 260 LTGRAPQELPADVGTRTET--PHLAQPIPVGDGAALLARRPDVRAAERRLAADTARIGVA 317 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 SDLYP +SL GS + + + W+ GP + ++ +++ I A++ A+ Sbjct: 318 VSDLYPRISLGGSGGFSSLGAMDVLGAGASRWAVGPLISWAFPNQAAVRARIGAAKADAK 377 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 T+ TVL A++E E AL++ ++ V L A + +++ +S+ R+G+ L Sbjct: 378 ASLATFDGTVLTALEETERALSAYARAEERVETLARARDEAERAARISLARQREGQIDFL 437 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER A E DL A+R A + VD++ A+G G+ Sbjct: 438 TVLDAERTLAGAEADLVAARRAGAFAQVDVFRALGGGWQ 476 >gi|16126029|ref|NP_420593.1| efflux system protein [Caulobacter crescentus CB15] gi|221234800|ref|YP_002517236.1| outer membrane efflux protein [Caulobacter crescentus NA1000] gi|13423215|gb|AAK23761.1| efflux system protein [Caulobacter crescentus CB15] gi|220963972|gb|ACL95328.1| outer membrane efflux protein [Caulobacter crescentus NA1000] Length = 478 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 128/466 (27%), Positives = 216/466 (46%), Gaps = 32/466 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+Y P P ++ WW FND L++LV AL Sbjct: 16 ALLAGCAVGPDYVAPPAPSADAFMGQPAVAARAAAPAPADAWWRGFNDPVLDRLVDRALA 75 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------------- 117 QNL + QA R+ A+ + + A L PS ASI + + N + T Sbjct: 76 QNLDLAQAAARVTQARAGLGAATAALLPS--ASIQAQGVANHASTQTPTGRLLAATPGFD 133 Query: 118 -------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + W++D+FG RR E++LA D+A A V A+L V ++ +YI R Sbjct: 134 RDGSLYEGNLVAGWELDVFGGTRRDREAALARYDAAKAGVAAARLAVAAQTADTYILVRG 193 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +ER+++A ++ + ++ L++ GA + L L + + + + IP LE+ Sbjct: 194 LQERLAVARGQVETQARLVDTVRLQYDHGAAADLQLQQAQGALAQTRAGIPVLEEGLEAA 253 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ + + G P T + + P L G PA L+R RPD+ E++L S Sbjct: 254 LNAMDVIQGAQPGTYRAELVTTTAIPVAPGL---TEAGGPAGLLRRRPDLVVAEQRLRAS 310 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A++G A S +P +SL+G + +S F G T L +FD G++ + ++ Sbjct: 311 NAEVGSALSQYFPKVSLSGLVGTATTSSATLFEGSATQAQGVLGLRWRLFDFGRVGAEVK 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A E +Q+ VL A ++VENA S+ + + L K+ + S + Y Sbjct: 371 AARGRKAEALAAYQQAVLRASEDVENAFVSLVKREVQARALSGGEASLAKARTASQVAYE 430 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G SL+++LD + V + A+ + A++ + + A+G G++ Sbjct: 431 AGAVSLVEVLDADARLLAVRDARAQARTEAARAAIRSFQALGGGWS 476 >gi|227112235|ref|ZP_03825891.1| putative outer membrane efflux lipoprotein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 505 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 131/486 (26%), Positives = 232/486 (47%), Gaps = 50/486 (10%) Query: 14 LLAGCTVGPEYTKPHMPLL------------PTQFSIGNS----KNLINIDTLK------ 51 L+AGC VGP+Y +P PL Q S+ S +L+ ++ Sbjct: 15 LMAGCAVGPDYHRPDAPLADRYQVQSAAQRSSAQPSVAKSPLAEPSLVEQESAAQVANLA 74 Query: 52 -WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 WWESFND L++LV AL QNL + QA+ R++ A+ + + A L PS +Y Sbjct: 75 VWWESFNDPLLSQLVSRALAQNLDLAQASARMSQARAGLGAATAALLPSGNISGQGTRAY 134 Query: 102 ASISH------RFIPNLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 SI +P L++ W++D+FG RR +++LA+ ++ A V Sbjct: 135 QSIETPQGQLLNSVPGYSRYGNAYEADLNASWELDVFGGLRRGRQAALADYQASEAGVAA 194 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 L V ++ YI R + R++IA+ + ++ ++ L ++G ++ + + E Sbjct: 195 THLAVAAQTADIYITLRGLQTRLAIANSQVKTQQELLDKVQLLHSKGLAAEYQVRQTEGA 254 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +++ +P L+ ++ + +LG P H Q ++ P I G PADL Sbjct: 255 LSQVQATVPALQTGIDAAMNALDVMLGTP--PGTHRAQLSTSQAIPQPPALIATGTPADL 312 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFG 327 +R RPDI E+ LA S A+IG+A S+ YP SL+ + +++ N F + + Sbjct: 313 LRRRPDIIVAERHLAASNARIGVAISEYYPKFSLSALLGSATSVSSGNLFSNGASQSAGV 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKL 386 L +FD G+I + I +A+ E ++ +VL A ++VENA ++ +N + + T Sbjct: 373 LGLRWRLFDFGRINAQIDQAKGQEAEALAAYRLSVLRATEDVENAFSALVNRETQSATLA 432 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 L S S I Y++G SL+++L + + + A+ + A++ V + A+ Sbjct: 433 AGETALASARQS-SFIAYQKGTSSLIEVLHADETLLQTSDARAQAQTESARAAVATFKAL 491 Query: 447 GSGYNP 452 G G+ P Sbjct: 492 GGGWQP 497 >gi|218259564|ref|ZP_03475264.1| hypothetical protein PRABACTJOHN_00923 [Parabacteroides johnsonii DSM 18315] gi|218225009|gb|EEC97659.1| hypothetical protein PRABACTJOHN_00923 [Parabacteroides johnsonii DSM 18315] Length = 456 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 119/461 (25%), Positives = 230/461 (49%), Gaps = 30/461 (6%) Query: 10 LFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +F+VL L+ C +G +Y +P + L P + G + +ID++ W + DT+L +L Sbjct: 7 VFMVLSLTLALSSCKIGKKYARPELDL-PEEIVAG--ADTASIDSIPWQSLYADTTLQRL 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASI---SHRF-----IPNLK 113 + IAL N + A +I KE I + R A+ FP A I R P Sbjct: 64 ITIALDNNKDMKIAAAKI---KEMIATKRITFAEQFPEIGARIYGQKERLNYGGDDPKPD 120 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +L W++DL+G R E+ +A + ++ +++++ +Y + + Sbjct: 121 PEYGAKLTLSWELDLWGNLRWANEAGIAAYLQSVEARRALQMTLVAEVAAAYYELCALDQ 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +I L ++ + L+ L+F G TS+ S + + E+ E+ +P+LE+ ++ ++ Sbjct: 181 EQAIVRHTLAARREGVRLAKLRFEGGLTSETSYSQAQVELARTETLLPSLEQKIKIKEND 240 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +S LLG + + + + + L +G+P+ L+ RPD+R E+KL ++ A++ Sbjct: 241 LSFLLGQYSGDVPRGLSLREQHLPATL----PVGLPSSLLERRPDMRQAEQKLREANARV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A++DL+P +SL G++ ++ +F + W L P+F GK K+ ++ A + Sbjct: 297 GVAQTDLFPKISLTGNLGFENEELTNFIK-SPAWFLAGDLLQPLFAMGKNKAKLKAARAR 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ +Q++VL A KEV NA+ +I + K++ + + + L+ + Y G S Sbjct: 356 YEQEVYNYQKSVLGAFKEVGNAIITIRKAKEVRLSYERLLNAADTYLQLAQLQYINGVTS 415 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 416 YMDVLDAQRGLLDAQLSLNKAMLDELLSTVYLYKALGGGWE 456 >gi|213967019|ref|ZP_03395169.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] gi|301385204|ref|ZP_07233622.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302062772|ref|ZP_07254313.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302130145|ref|ZP_07256135.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928341|gb|EEB61886.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] Length = 490 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 121/471 (25%), Positives = 223/471 (47%), Gaps = 44/471 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIA 68 I LL+ C VGP+Y KP + + D + WWE++ D LN LV Sbjct: 24 IALLSACAVGPDYQKPSSAAPAQFKAAAGWRAATPSDAMAKGAWWEAYGDAQLNTLVARL 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----------------SYASISHRFIPNL 112 N T+ Q + A+ + S R FP+ S + S+ + Sbjct: 84 NTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGAGTSSSGTSNTSASGI 143 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 144 RNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYMQLRVID 203 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+ + +D Y++++ L+ ++ G ++ + + ++KS ++D+ L + Sbjct: 204 EQKRLLESTVDAYQRSLTLTRNQYRAGIAGTDAVAQAQTQLKSTQADLIDLVWQRAQFEN 263 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLAD 287 I+ L+G +F N P IP I G+P+ L+ RPDI E+ + Sbjct: 264 AIAVLMGVAPADF---------NLPPTTTIPQLPQIPPGVPSQLLERRPDIAAAERSVMG 314 Query: 288 SVAKIGIAKSDLYP--SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIK 341 + A IG+AK+ YP +LS++G + ++F + N WS GP+L L +FD G+ Sbjct: 315 ANANIGVAKAAYYPDFTLSMSGGY---NSSTFANWISLPNRFWSVGPQLALTLFDGGRRS 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 372 AEVDRTEALYDQTVAQYRQTVLNGFQEVENYLIQLKVYEEEAAVRQEALVAARDSLRLTN 431 Query: 402 INYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ A + L++ + +L S V L A+G G+N Sbjct: 432 NQYKAGLIGYLDVVNVQATALSNERTVLNVLQSRLIAS-VQLIAALGGGWN 481 >gi|240118416|ref|ZP_04732478.1| MtrE [Neisseria gonorrhoeae PID1] gi|268604132|ref|ZP_06138299.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID1] gi|268588263|gb|EEZ52939.1| outer membrane lipoprotein [Neisseria gonorrhoeae PID1] Length = 467 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 121/445 (27%), Positives = 218/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY +G G Sbjct: 434 EGAALSAQLTRAENLADLYKVLGGG 458 >gi|311108510|ref|YP_003981363.1| efflux transporter outer membrane factor lipoprotein 8 [Achromobacter xylosoxidans A8] gi|310763199|gb|ADP18648.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 8 [Achromobacter xylosoxidans A8] Length = 488 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 124/478 (25%), Positives = 234/478 (48%), Gaps = 33/478 (6%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESF 56 +++ A + + LAGC VGP++ P P LP Q+ + N ++ + WW+SF Sbjct: 5 HLIHATLACTLSALAGCAVGPDFKAPQ-PQLPAQWRMANESAAGSVPVPQEVNRSWWDSF 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK--- 113 D++L L+ A NL I A ER+ ++ + AD P A S++ N + Sbjct: 64 GDSTLTTLIAEATGANLDIRIAHERLLQSRAALRVTEADGLPGIGAGASYKRGQNSEVGL 123 Query: 114 TNSTGQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + +G+ +D+ W++DL+G+ RR +E + A ++A L + ++ Sbjct: 124 ADPSGRGGKSSFNLWQAGMDASWELDLWGRVRREVEQAGAQSEAALEAQRGVVLAIRAET 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI R + ++ + + L + N+ L+ L+ +G ++L + + +A+ +IE+ +P Sbjct: 184 ARNYILLRGAQNQLDVLRKTLANAEHNLALTRLRQREGVATELDVSQADAQTAAIEARVP 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L ++ ++ LL P + L +P+ G+P++L RPDIR Sbjct: 244 PLALRIDQLMNALALLLEQPPGTLQERLAAIGPIPGGPLQVPV--GLPSELAGRRPDIRR 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPI 334 + L +VA +G+A+ D YP ++L+G++ L D G + GP L +PI Sbjct: 302 AQANLHAAVAAVGVAEGDFYPRITLSGNLGLQALQLRDLDTDNAGI---FGVGPALQIPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G+++ +R ES AQE + +Q+TVLNA EV+NA+T+ + L+ A E + Sbjct: 359 FQGGRLRGRLRLRESQAQEAALLYQKTVLNAWHEVDNAMTAYQAQQLTRASLERASESAR 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +++ + Y G +++L + A + + + ++ VDLY ++G G+ P Sbjct: 419 QALLNAQRQYAAGASDFVNVLSAQNAVLASDQERVSTQAAVSLVLVDLYRSLGGGWEP 476 >gi|187478307|ref|YP_786331.1| outer membrane efflux protein [Bordetella avium 197N] gi|115422893|emb|CAJ49421.1| outer membrane efflux protein [Bordetella avium 197N] Length = 472 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 23/459 (5%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F+L LL+GC ++ P+Y + +P+ P F+ + + + L W + D L L++ Sbjct: 8 FALAAGLLSGCLSLAPKYERGPLPV-PASFAHSTADS-TPVAALAWPSFYTDPQLRSLIE 65 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTN 115 +L N + A R+ A+ RAD FP+ + A +S P + + Sbjct: 66 RSLANNRDLRLAVLRVAEARAAFGIQRADQFPTLGLTAEGGRQRTPADLSITGQPMVASQ 125 Query: 116 -STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G + W++D +G+ R + +++L N + A A L++IS++ +Y+ R ER Sbjct: 126 YQVGVGLASWELDFWGRVRDLKDAALENYLATDAARQAATLSLISQVADAYLSLRALDER 185 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++ + ++ + +F GATSKL L ++E + LE++ + Sbjct: 186 LALTRATIASRAASLHIFQRRFEVGATSKLDLTQVETLWQQATVLGAELEQTRAAQAQVL 245 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P L Q + + L + G+P+DL+ NRPDI E L A IG Sbjct: 246 QQLVGEP----LDLPQARGGLNEVTLMHELPPGLPSDLLSNRPDIVAAEHTLKAGNANIG 301 Query: 294 IAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P ++L G D F G + W F P L LPIFD G+ ++N+ A + Sbjct: 302 AARAAFFPRITLTGLFGTASNELDGLFGGGSRAWQFVPNLNLPIFDAGRREANLDLARAR 361 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 Q+ +++T+ A +EV +AL++ + + V L V+ + L+ + Y G Sbjct: 362 QQQALAQYEKTIQTAFREVADALSARHWLTEQVDVLAATVQAQAERKRLAQLRYDHGASP 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ERA + + +R L S V LY A+G G Sbjct: 422 FLEVLDAERALLEAQQQWVRTRRALLASQVALYAALGGG 460 >gi|255065770|ref|ZP_05317625.1| multiple transferable resistance system protein MtrE [Neisseria sicca ATCC 29256] gi|255050088|gb|EET45552.1| multiple transferable resistance system protein MtrE [Neisseria sicca ATCC 29256] Length = 472 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 122/447 (27%), Positives = 216/447 (48%), Gaps = 14/447 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 V L+ CT+ P+Y +P + + T F + I L W + F D L++L+ IAL++N Sbjct: 17 VALSACTMIPKYEQPQVEVAET-FKYDTFDDGIRAADLGWQDFFADPRLHRLIDIALERN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN------STGQLDSDWKI 126 + A ++ + R DL PS AS + +L S G + +++ Sbjct: 76 TDLRTAALNAEIYRKQYMIARNDLLPSINASGTGTRTGSLSGGVTRSEYSVGLGAAAYEL 135 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ R + +++L S A D A L +I+ + ++ + + +E +++A ++L + Sbjct: 136 DLFGRVRSNSQAALQGYFSVAANRDAAHLALIAAVAKAHFNELYAQESMALAQRVLKTRE 195 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +LS ++ G S + L + EA I+S ++D K+ + ++TL+ P E L Sbjct: 196 ATYKLSQMRHKAGVISAVDLRQQEALIESAKADYANAVKNREQARNALATLINQPLPEDL 255 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S F+ + G+ ++++ NRPDIR E L + A IG A++ +P++SL Sbjct: 256 PAALPLSKQFK---ITRLPAGLSSEVLLNRPDIRAAEHSLKQANANIGAARAAFFPTISL 312 Query: 306 NGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 GS+ F WSF P + LPIF+ G K+N+ A+ + Q + ++ V Sbjct: 313 TGSVGTASGELSGLFKSGTGIWSFAPSITLPIFNWGTNKANLDVAKLRKEAQIVAYEAAV 372 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A ++V NAL + + K L + S+ L + Y+ G + LD+LD ER++ Sbjct: 373 QAAFQDVSNALVAREQLDKSYAALNKQSRAYNDSLRLINLRYKHGVSNALDLLDAERSSY 432 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + ++ DLY A+G G Sbjct: 433 GAETALLANQLTRLENLADLYKALGGG 459 >gi|21245018|ref|NP_644600.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] gi|21110745|gb|AAM39136.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] Length = 486 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 41/481 (8%) Query: 2 NILR--AIFSLFIVLLAGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKW 52 ILR + +L +L A TVGP Y P P F GN++ +W Sbjct: 4 TILRPLGVAALLSMLTACSTVGPNYAVPAESAYRRPAANAAFLDTGNAQVQPGAALPARW 63 Query: 53 WESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RADLF 97 W + D L+ L++ AL+ N+ + A R A E + RA + Sbjct: 64 WALYQDPMLDGLIEQALRDNIELKVAGANLRRAAAVYEQAMDAGGFDYEVEAGVSRAQV- 122 Query: 98 PSSYASISHRFIP--NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 S+ A + +P NL + G+ ++ DLFG+ +R E++ A+ A A +D+A++ Sbjct: 123 -SAEAFLQEEKLPVFNL---ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARV 178 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V +++ SY++ H + +A L L + + +++ G + L + A++ Sbjct: 179 SVAAQVAGSYVEICHANHELQVAEHSLQLQQHSRQITQRLIAAGRGTPPDLARATAQVAM 238 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +E+ +P L + + ++ LLG E + S P L PI IG L+ Sbjct: 239 LEASLPPLRARRQAAGYQLAALLGKTPGEVPAGVD--SCAHAPALQQPIPIGDGRALLAR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKL 330 RPD+R E++LA + A+IG+A ++LYP + L GSI T D P TH WSFGP + Sbjct: 297 RPDVRQAERRLAAATARIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSFGPLI 354 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 + G ++ +R E+ A + TVL A++EV+ L+ +D + L+ A Sbjct: 355 SWTLPSSGA-RARVRATEAGADAALAQFDNTVLQALREVQTTLSRYAQDLDRLHLLEQAQ 413 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + + + Y+ GR L LD ER A ++ L+ A+ Q+++ + L++A+G G+ Sbjct: 414 QQAELASAQNRRLYQGGRTPYLSSLDAERTLATADMTLATAQAQVSQDQIQLFLALGGGW 473 Query: 451 N 451 + Sbjct: 474 D 474 >gi|295689433|ref|YP_003593126.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295431336|gb|ADG10508.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 478 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 135/468 (28%), Positives = 224/468 (47%), Gaps = 36/468 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIA 68 LL+GC +GP+Y P P +G I T WW FND L++LV A Sbjct: 16 TLLSGCAIGPDYVAPPAP--KAGAFMGQPAIAARIATPAPAETWWRGFNDPVLDRLVGRA 73 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSS---------YASI---SHRFI---PNLK 113 L QNL + QAT R+ A+ + + A L PS+ +AS + R + P Sbjct: 74 LAQNLDLAQATARVTQARAGLGAATAALLPSASIQGQAATVHASTQTPTGRLLSATPGFD 133 Query: 114 TNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + G L + W++D+FG RR E++LA D+A A V A+L V ++ +Y+ R Sbjct: 134 RDGSSYEGNLVAGWELDVFGGARRDREAALARYDAAEAGVAAARLTVAAQTADTYMLVRG 193 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +ER++IA + + + +E L + +GA + L L + + + + IP LE Sbjct: 194 LQERLAIARRQAETQSRLVETVRLLYERGAAADLQLRQAQGGLAQTLASIPVLETGLEAA 253 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ + + G P T + + P L + G PA+L+R RPD+ E++L S Sbjct: 254 LNAMDVIQGAQPGTYRAELVTPSAIPAAPGL---ADAGGPAELLRRRPDLIVAEQRLRAS 310 Query: 289 VAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A++G A S +P LSL+G + + D F G T L +FD G++ + ++ Sbjct: 311 NAEVGSALSQYFPKLSLSGLVGTATTSRDTLFEGPATQAQGVLGLRWRLFDFGRVNAEVK 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSI--NEDKKIVTKLQHAVELHKKSMSLSMIN 403 A+ E +Q+ VL A ++VENA S+ ED+ V L K+ + S Sbjct: 371 AAKGRKAEALAAYQQAVLRASEDVENAFVSLVKREDQSRV--LSDGETSLAKARAASQAA 428 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G SL+++LD + V + AK + A++ + + A+G G++ Sbjct: 429 YEAGAVSLVEVLDADARLLAVRDARAQAKTEAARAAIRSFQALGGGWS 476 >gi|261399980|ref|ZP_05986105.1| multiple transferable resistance system protein MtrE [Neisseria lactamica ATCC 23970] gi|269210443|gb|EEZ76898.1| multiple transferable resistance system protein MtrE [Neisseria lactamica ATCC 23970] Length = 467 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 122/453 (26%), Positives = 216/453 (47%), Gaps = 30/453 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYGQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------------- 121 + A ++ + R +L P+ N + G LD Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPT--------LAANANGSRQGSLDGGNVSSSYNVGLG 128 Query: 122 -SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +++DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A + Sbjct: 129 AASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQR 188 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +L + +LS L++ G S ++L + EA I+S ++D +S + ++TL+ Sbjct: 189 VLKTREATYKLSELRYKAGVISAVALRQQEALIESAKADYAHAVRSREQARNALATLINQ 248 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P + L F + G+ ++++ +RPDIR E L + A IG A++ Sbjct: 249 PIPDDLPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAF 305 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS+ L GS+ F WSF P + LPIF G K+N+ A+ Q Q + Sbjct: 306 FPSIRLTGSVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDAAKLRQQAQIV 365 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ V +A ++V NAL + + K L K+++ L + Y+ G LD+LD Sbjct: 366 AYEAAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLD 425 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER++ E A+ A++ DLY A+G G Sbjct: 426 AERSSYSAEGAALSAQLTRAENLADLYKALGGG 458 >gi|212704780|ref|ZP_03312908.1| hypothetical protein DESPIG_02844 [Desulfovibrio piger ATCC 29098] gi|212671742|gb|EEB32225.1| hypothetical protein DESPIG_02844 [Desulfovibrio piger ATCC 29098] Length = 511 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 117/471 (24%), Positives = 227/471 (48%), Gaps = 30/471 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +L+A +L + L + GC++ P+Y +P + S+ + +N D WW FND L Sbjct: 4 LLKAGLTLVLCLAVTGCSLAPDYKRPEQDIPKEWRSVDLGPSPLNTD---WWTRFNDPVL 60 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---- 117 N LV+ AL+ N + ++ +I++A + + L PS +S ++NST Sbjct: 61 NALVEEALKNNQDLAESLAKIDSAAAKLGVGTSQLAPS----VSGAGAATSQSNSTKIAN 116 Query: 118 -------------GQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPS 163 GQL + W++D +G+ R+ + L++ L + + +L+V S+ S Sbjct: 117 YNDVADRSYVNYQGQLSASWELDFWGKYRNNYTMLSDVLLNTVVSHEALRLSVASQTAQS 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y +++ A + L + + ++ QG ++L + AE+++ S + + Sbjct: 177 YFALLALDMQLATAKRTLRTREDAFGIYTSRYRQGDITELDWQRARAEVETARSQVHSST 236 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQE 282 + +++ LLG + + + + + P+ G+P++L+ RPD+R E Sbjct: 237 VAVDSAEASLAVLLGRSPRDIMSAVMPRGGDISKLPAPPVLPAGLPSELLERRPDVRAAE 296 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + A IG+A+++ +PS+SL G +++ + N F G WS+G +P+ D G+ Sbjct: 297 YMIMAYNANIGVARAEFFPSISLTGMLGTLSASVVNLFSGPAGAWSYGVTGSMPLLDFGR 356 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 N++ AE+ + +++TV NA K+V +LTS E IV Q V+ +++ + Sbjct: 357 TWYNVKDAEAQKEAAIAVYRKTVQNAFKDVRTSLTSQREADAIVAASQAQVDSLRRAAEI 416 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + Y G L +LD ER E+ L+ A R + V + +A+G G+ Sbjct: 417 ARLQYDNGYTDYLTVLDAERQLFSAELSLANALRDRLNAVVSVCMALGGGW 467 >gi|226940349|ref|YP_002795423.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] gi|226715276|gb|ACO74414.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] Length = 467 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 118/450 (26%), Positives = 217/450 (48%), Gaps = 22/450 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC VGP+Y +P + + P+ F + +DT +WW+ F D L+ V AL+ N + Sbjct: 16 GCAVGPDYRRPAVDV-PSGFRFQQPDASDAALDT-EWWKDFGDPVLDGYVSEALEHNRNL 73 Query: 76 LQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKTNSTGQL--DSDWK 125 A ++AA + RA LFP+ S S + +P + +++ +L + W+ Sbjct: 74 AIAVANVDAAAAQLTIARASLFPTLDYQASASRGRSSSQQLLPGSQASNSFELLGSTSWQ 133 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 IDL+G RR E++ A L ++ +L+V+S + Y+ R ++++IA + + Y Sbjct: 134 IDLWGALRRQTEAAQALLKASEQARRGVRLSVVSSTVQGYLQLRGLDQQLAIARRTANSY 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++L L++ GA ++++L ++ ++ +S + IP +E S + +S LLG Sbjct: 194 ADTVKLFELQYQYGAIARITLEQVRSQYQSALASIPPIEASIVQTENALSLLLGRNPGPV 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + P+ +P+ L+ RPDI E +L + AKIG+A++ +P L+ Sbjct: 254 VR-----GKPLAELRLPPVPGALPSSLLTRRPDILEAEARLVSANAKIGVARAQYFPQLT 308 Query: 305 LN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 LN GS+A + WS L +F G +R AE+S + T+ +T Sbjct: 309 LNAGIGSLATRTGSLLTAGAGIWSVAGALAGSVFSGGATVGAVRSAEASTRAAEQTYLQT 368 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + A +VENAL+ + + L+ ++ L+M+ Y+ G + L +LD R Sbjct: 369 IQQAFADVENALSGWQTSSQRLKSLEDLQASSREYADLAMLQYQGGIANYLTVLDARRQL 428 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E+D + A+ + V +Y+A+G + Sbjct: 429 YSAEIDAASARTGYLSNAVAVYLALGGDWG 458 >gi|254248759|ref|ZP_04942079.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124875260|gb|EAY65250.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 495 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 123/479 (25%), Positives = 223/479 (46%), Gaps = 46/479 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSLNKLVKI 67 LLAGCTVGP+Y P P + + +DT WW + ND L+ L+ Sbjct: 19 CLLAGCTVGPDYRG--APAAPDASTFVRAPA-TGVDTALPAPSAWWHALNDRQLDALIVA 75 Query: 68 AL---------------------QQNLTILQATERINAA---KENILSVRADLFPSSYAS 103 AL QQ + + AA +E +S L PS+ + Sbjct: 76 ALVYNPDLHAAQARLRAARAQLSQQRAAQMPKSSATVAAIRMREPDVSALGSLLPSNGSE 135 Query: 104 ISHRFIPNLKTNSTGQL-----DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 S P+L + QL D+ W+IDLFG RR +E++ A ++ A + ++++ Sbjct: 136 QSGGTSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQVSIA 195 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +Y+D R ++R++++ + L ++ +EL+ + +G + + +L ++++ + Sbjct: 196 AEVANAYVDLRDQQQRLALSKRTAQLQQQMLELTQQRRARGVAADADIERLTTQVENTRA 255 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + L+ ++ ++ L G A L + P L + IG PA L++ RPD Sbjct: 256 SLIPLDAQVTESLDRLAILTGR-APGALDAALSTPDAALPTLPASVAIGDPATLLKQRPD 314 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYL 332 IR E++LA S A+IG +D +P ++L G + + + PG+ N W P L Sbjct: 315 IRAAERRLASSNAQIGEHVADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQW 372 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 I D G+ + +R AE+S E +Q+ VL A+++ AL ++ V L Sbjct: 373 NILDFGRTRGAVRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVVALTKVQTS 432 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ + +L K+YV + ++G G+ Sbjct: 433 AVHSRALMDQRYRAGVASMIDLLDTQREALAAQQNVIAGQAELIKNYVSVQKSLGLGWQ 491 >gi|190575811|ref|YP_001973656.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] gi|190013733|emb|CAQ47368.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] Length = 470 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 120/468 (25%), Positives = 219/468 (46%), Gaps = 27/468 (5%) Query: 7 IFSLFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +F F+ LA CT+GP++ +P L S + N I+ D WW F+D L Sbjct: 6 VFRTFVAASLCTALAACTMGPDFVRPQAELPSHWQSEAVAGNAIDQDA-AWWAGFDDPLL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---NSTG 118 +L L NL + A R+ ++ AD PS AS S N + + +G Sbjct: 65 GQLANQVLAANLDLQLAANRVQQSRAARGITAADRLPSVSASASGVRARNSEVGLNDPSG 124 Query: 119 QLDSD------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 D W++DL+G+ RR +E++ A + A ++ ++++ Y+ Sbjct: 125 NGGRDDYGLFQAGIGLSWELDLWGRVRRQVEAADARVQMAEEDAHAVRIALLAETARDYL 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++ ++I L + L+ + QG S L + A++ S+++ I L Sbjct: 185 QLRATRQLLAITEDNLSIAHDIKRLTEARQRQGVASTLQVSSAAAQVASLQARIAPLRHR 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ LL P +Q ++ P L + +G+P++L RPDIR E L Sbjct: 245 ESQLRNALAFLLAQPPQALDAQLQDARRDW-PALP-AVAVGLPSELAERRPDIRRAEAAL 302 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ P ++LNG + G+N H +S GP + LPIF G++K+ Sbjct: 303 HAATAGIGVAKASFLPRITLNGDAGFQAKQLDDLDGWNAHRFSIGPSISLPIFQGGRLKA 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ + Q+ + ++ TVL A EV++A+ + +++ +L AV+ + ++ + Sbjct: 363 NLALSRLQQQQSALQFRRTVLQAWHEVDDAMDGYSAEQQRTVQLHVAVDESETALGAARR 422 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G +LD+L +R + L+ ++ A + V+LY A+G G+ Sbjct: 423 QYQAGVVDMLDVLTTQRIALDNQAALANSQATAAIARVELYRALGGGW 470 >gi|91777793|ref|YP_553001.1| efflux ABC transporter outer membrane protein [Burkholderia xenovorans LB400] gi|91690453|gb|ABE33651.1| ABC efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 470 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 121/456 (26%), Positives = 223/456 (48%), Gaps = 35/456 (7%) Query: 19 TVGPEYTKPHMPLLPTQFSIGNSKN-LINIDT------LKWWESFNDTSLNKLVKIALQQ 71 ++ P Y +P +P+ P ++ G+S + ++ D + W F D L L++ AL Sbjct: 2 SLAPHYVRPALPV-PDTWATGSSADGTLSADATPAASRIDWRSYFPDAQLQALIEQALTG 60 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISH-RF------IPNLKTNS----TGQL 120 N + A +R+ A+ RAD P+ A S+ RF +P + G + Sbjct: 61 NRELRIAVQRVEEARATYGIRRADTLPTISAGGSYVRFRSPGGLLPGGSFDGEAYQVGLM 120 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +S+W++D +G+ R++ +++L ++ A A ++VI+ + +Y+ R ERI++A + Sbjct: 121 ESNWELDFWGRVRNLKDAALEEFLASDAARRAATISVIANVADNYLLLRELDERIAVARE 180 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + +++ + +F GA SKL L + E + ++ + LE+S H ++ L+G Sbjct: 181 TIASRAESLRIFRRRFEVGAISKLDLRQSEILFQQAQTLVAQLEQSRATQAHALAVLVGA 240 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 PA L + P+L+ G+P+ L+ RPDI E +L + A IG A++ Sbjct: 241 PAP--LQPAPLDDASVCPDLHA----GLPSSLLERRPDIVAAEHRLRAANANIGAARAAF 294 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P ++L G++ T N F + W F P + LPIFD G+ +SN+ A++ E Sbjct: 295 FPRITLTGAVGSTSTDLQNLFASGSGAWIFTPNISLPIFDAGRNRSNLELAKAREGEAVA 354 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE---LHKKSMSLSMINYRQGRYSLLD 413 ++ET+ +A ++V +AL++ + T++Q + + L+ Y G L+ Sbjct: 355 QYEETIQDAFRDVADALSA---RVWLATQVQAETDTLVAQSERARLARQRYDNGATPFLE 411 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R L +R L S V LY A+G G Sbjct: 412 VLDAQRDLLDARQQLIQTRRALLTSRVALYAALGGG 447 >gi|109900424|ref|YP_663679.1| RND efflux system outer membrane lipoprotein [Pseudoalteromonas atlantica T6c] gi|109702705|gb|ABG42625.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas atlantica T6c] Length = 460 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 219/464 (47%), Gaps = 26/464 (5%) Query: 2 NILR-AIFSLFIVLLAGCTVGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 N+L+ + I L+ C VGP+Y P+ + + + ++ L N WW++F D Sbjct: 3 NMLKIGTLTGLIFALSACAVGPDYQAPNKVNDIELTGTYEQAEKLTN-----WWQAFGDE 57 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------- 111 LN L+ AL++N T+ QA + A + DL P + N Sbjct: 58 DLNHLIDEALKENRTLFQAQANVLRAYAIFRDSQNDLLPKGTLDAGYSASKNQTMLESDD 117 Query: 112 ---LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L+ +TG + W +DLFG+ RR +E+SLA + A A+L +IS++ SY D Sbjct: 118 DTILRGYNTG-ANLTWDVDLFGKVRRAVEASLAEAEQADILWHDAQLQIISQVAASYGDY 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R+ +A Q L ++ + ++ G S+L + ++ A++ +E+ +P + Sbjct: 177 RGAQFRLKVAEQNLANLRQTRTIVKARYQAGFASELEMARINAQVFEVEATVPQMRTLLA 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +S LL E + Q + P L P+ + + +R R D+ E+ LA Sbjct: 237 RADATLSALLAKKPGELVLNAQPEL----PQLSQPVALVPGENYLRYRADVASSERALAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 S A+IG+A +DLYP++S++G + + G WS P + D +K+ IR Sbjct: 293 STARIGVATADLYPNVSVSGFLGFLSGPGLTLGGDTKSWSVAPTISWQAADLASVKARIR 352 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A +S +++ V +A+ +++ +L S N ++ H + +K+M+++ + Sbjct: 353 QANASTDIALAQFEQQVFDALADMQFSLQSYNFSRQQEQSTHHQWQASEKAMTIARQRFE 412 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++L+ +R + L++ ++Q VD+Y A G G Sbjct: 413 AGSGEFLELLEAQRDALQSRDQLALLEQQSFNRLVDVYRAFGGG 456 >gi|320324624|gb|EFW80701.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328996|gb|EFW84995.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880698|gb|EGH14847.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 489 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 39/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQTPSMAA-PAQFKAAEGWRAATPGDAMAKGAWWEVYRDPQLNS 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+AK+ YP +L+ G + T N N WS GP+L L +FD G+ Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRR 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 TAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLT 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G+N Sbjct: 430 NNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIAS-VQLIAALGGGWN 480 >gi|119713716|gb|ABL97766.1| outer membrane RND efflux family transporter [uncultured marine bacterium EB0_41B09] Length = 489 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 228/465 (49%), Gaps = 26/465 (5%) Query: 7 IFSLFIVLLAGC-TVGPEYT-KPHMPLLPTQFSIGNSKNLI-NIDTLK-WWESFNDTSLN 62 ++ L + GC VGP+Y P M + P ++ S + DT K WW +D LN Sbjct: 17 LYLLVFSAITGCKAVGPDYEGSPEMDV-PENWNNDLSNEFVEQSDTQKQWWTLLDDPILN 75 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQ- 119 L+ A NL A R+ A+ N V A FP + +S + N K+ +TG+ Sbjct: 76 DLIDRAAIDNLDAKIALSRVEEARANYGVVEAAKFPQIDAVGDVSRK--SNSKS-ATGEK 132 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD W+ID+FG RR IE++ A LD+ + + +++ +YI R Sbjct: 133 NTDNYTSIGLDLSWEIDIFGYVRRSIEAADAQLDATIENYRDVMVILYAEIARNYIALRT 192 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R+ A + + ++ + + + +++ S++ +++ E + + ES +P Sbjct: 193 SQLRLQFALENVKSQRETLNIVNARYSAELVSEVDVLQSEQNLAAAESYVPLFYADIDEL 252 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++++ LLG ++ N P++ + +P +++R RPDIR E +L Sbjct: 253 FNSLAVLLGKNPGSLNQELK--GNKGIPHIPEKTIVMLPREILRQRPDIRKAESRLVQET 310 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A++GIA ++ YP +LNG+ A D+ F + +WSFGP +FD G +S I+ Sbjct: 311 AEVGIATAEQYPRFNLNGTFGYDARGSDSQFSSNSRYWSFGPNFRWDLFDAGAEESAIKV 370 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ ++ + +++TVL A +EVENAL S E+K+ L+ +V+ KK +++ Y Sbjct: 371 QDAQLEQARVNYEKTVLTAFEEVENALKSYKEEKQRNASLRASVKAAKKVNKITVARYTS 430 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G ++ D ER E +L+ + L + + LY A+G G++ Sbjct: 431 GLIDFQEVQDAERVIFFQEDELAKSDGSLVQFIIQLYKAMGGGWD 475 >gi|289625136|ref|ZP_06458090.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648695|ref|ZP_06480038.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868008|gb|EGH02717.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 488 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 39/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQTPSMAA-PAQFKAAEGWRAATPGDAMAKGAWWEVYRDPQLNS 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+AK+ YP +L+ G + T N N WS GP+L L +FD G+ Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRR 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 TAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLT 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G+N Sbjct: 430 NNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIAS-VQLIAALGGGWN 480 >gi|170691192|ref|ZP_02882358.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170144441|gb|EDT12603.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 513 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 30/473 (6%) Query: 4 LRAIFSL--FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLK-WWE 54 LRA F+L LL GC VGP Y+ P + PL +S + D WW+ Sbjct: 14 LRA-FALVPLAALLNGCMNVGPNYSLPKDALVNAPLANAPIEGADSALTSHADVPAVWWK 72 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA-DLFPSSYASISHRF----- 108 ++D LN LV ALQ N + A + ++E + +A F +++ R Sbjct: 73 LYDDPVLNGLVDEALQSNTDLRVAAANLARSREALGVAQAQGGFSGKTSAVFERAQESAE 132 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 +P + G + ++IDLFG+ RR +E++ A+ D+ A D+A+++V++ + Sbjct: 133 QYLLTEKLPVVNEGDVG-ISVAYEIDLFGKLRRGVEAAQADADAVQAAGDLARISVVADV 191 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y++ E + IA Q L L ++ +++S G ++ + + + ++ ++ +DIP Sbjct: 192 VRAYVEQCSAAEELKIAQQSLALQRQRVDVSRRLRDVGRGNQTEVTRGQTQVDTLSADIP 251 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ + ++ LL ++ + + P + PI +G A L+R RPD+R Sbjct: 252 RYTARRKIAQYRLAALLARAPSDLPPAVL--ACEKLPQIRQPIPVGDGAALLRRRPDVRE 309 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKG 338 E++LA S A+IG+A LYP++S+ S LT ++ W FGP + F Sbjct: 310 AERQLAASTARIGVATGALYPTVSIGASAGLTGVLEDLGTSPTARWGFGPLISW-TFPAN 368 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + +R A++S+Q + VL A++E E +L + D LQ A++ +S Sbjct: 369 GARGRVREAQASSQVALARFDGVVLTALRETETSLATYASDYARTEALQAALKSAAQSAD 428 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR GR S + LD R + ++ A+ Q+A V+L++A+G G+ Sbjct: 429 ETHRLYRAGRESFISDLDATRTLTSTKAQVAAAEGQVAIDQVNLFLALGGGWE 481 >gi|59801711|ref|YP_208423.1| hypothetical protein NGO1363 [Neisseria gonorrhoeae FA 1090] gi|59718606|gb|AAW90011.1| multidrug efflux pump channel protein [Neisseria gonorrhoeae FA 1090] Length = 467 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 121/445 (27%), Positives = 218/445 (48%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ ++ +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEKAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +LS L++ G S ++L + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER + Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERISYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|269214056|ref|ZP_05983494.2| multiple transferable resistance system protein MtrE [Neisseria cinerea ATCC 14685] gi|269144619|gb|EEZ71037.1| multiple transferable resistance system protein MtrE [Neisseria cinerea ATCC 14685] Length = 445 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 119/438 (27%), Positives = 215/438 (49%), Gaps = 14/438 (3%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P+Y +P + + T F + + I L W + F D L KL+ IAL++N ++ A Sbjct: 3 PQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLN 61 Query: 82 INAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDLFGQ-RRH 134 ++ + R +L P+ A+ +L + G + +++DLFG+ R Sbjct: 62 SEIYRKQYMIERNNLLPTLAANAGGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSS 121 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L + +LS L+ Sbjct: 122 SEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREATYKLSELR 181 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 + G S ++L + EA I+S ++D +S + ++TL+ P + L Sbjct: 182 YKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDNLPAGLPLDKQ 241 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH- 313 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L GS+ Sbjct: 242 F---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSA 298 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 F WSF P + LPIF G K+N+ A+ Q Q + ++ V +A ++V N Sbjct: 299 ELSGLFKSGTGVWSFAPSITLPIFTWGTNKANLDAAKLRQQAQIVAYESAVQSAFQDVAN 358 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 ALT+ + K L +K+++ L + Y+ G LD+LD ER++ E + A Sbjct: 359 ALTAREQLDKAYAALSKQSRAYKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAVLSA 418 Query: 432 KRQLAKSYVDLYIAIGSG 449 + A++ DLY A+G G Sbjct: 419 QLTRAENLADLYKALGGG 436 >gi|1707646|emb|CAA67865.1| hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 472 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 227/462 (49%), Gaps = 22/462 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +FSL L+ CTVGP+Y P + + ++L WW+ F+D +LN+LV Sbjct: 16 GLFSLLA--LSACTVGPDYRTPDTAAAKIDATASKPYDRSRFESL-WWKQFDDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ-- 119 + +L N + A R+ AA+ V D FP + A I P + + Sbjct: 73 EQSLSGNRDLRVAFARLRAARALRDDVANDRFPVVTSRASADIGKGQQPGVTEDRVNSER 132 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 LDS W++DLFG+ RR +ESS A ++A A + ++++I++L+ +Y R + R Sbjct: 133 YDLGLDSAWELDLFGRIRRQLESSDALSEAAEADLQQLQVSLIAELVDAYGQLRGAQLRE 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA L+ K++ +L+ G ++L +++ +A + + + +P L+ H I+ Sbjct: 193 KIALSNLENQKESRQLTEQLRDAGVGAELDVLRADARLAATAASVPQLQAEAERARHRIA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TLLG E + S P + + IG P +L+R RP+IR E+++A S A +G+ Sbjct: 253 TLLGQRPEELTVDL---SPRDLPAITKALPIGDPGELLRRRPNIRAAERRVAASTADVGV 309 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESS 350 A +DL+P+ + H + + WS GP + FD G +++ +R A++ Sbjct: 310 ATADLFPAGQPQ-RLPRLHRRAGSQIGSSAARAWSVGPSISWAAFDLGSVRARLRGAKAD 368 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A ++++ VL A++E NA + + ++ + L E + + + I YR+G Sbjct: 369 ADAALASYEQQVLLALEESANAFSDYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTD 428 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y ++G G+ P Sbjct: 429 FLVLLDAEREQLSAEDAQAQAEVELYRGIVAIYRSLGGGWQP 470 >gi|17549675|ref|NP_523015.1| putative outer membrane lipoprotein [Ralstonia solanacearum GMI1000] gi|17431929|emb|CAD18607.1| putative outer membrane lipoprotein [Ralstonia solanacearum GMI1000] Length = 490 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 123/469 (26%), Positives = 217/469 (46%), Gaps = 58/469 (12%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 C + P Y P + TQ+ + WW FND ++ +L++ A + ++ Sbjct: 25 ACALQPPYQAPQTAIA-TQWQAERPHGASVTSLVDWWSRFNDPAVAELIRRAEADSPSLA 83 Query: 77 QATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSDWK 125 +A +IN+A+ ++S AD +P+ S + + +L T +G LD+ W+ Sbjct: 84 KAVAQINSARATLVSNGADAWPALTGSASVTRAKSATAAGDTTVSSLSTTRSGGLDASWE 143 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 IDLFG+ R A+ SA AQ++ + ID H R+S+A ++ D Y Sbjct: 144 IDLFGKVR------ASRQSAQAQLE------------ARIDDWH-DARVSLAAEVADDYV 184 Query: 186 KNIELSHL---------------KFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFR 227 + L K T+ A + + AE + ++ E+S Sbjct: 185 QYRACRQLAKAYAQAAASRAQTAKSTRAAVAAGMTAASDGYLAEGSTASANATATEQSVA 244 Query: 228 MN--VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI---PADLIRNRPDIRYQE 282 V ++ L G + + P+L P + PADL+R RPD+ E Sbjct: 245 CETLVKSLVALTGTDEPTLRGIIDRPGA---PDLPQPDTFSVTSVPADLVRQRPDLASAE 301 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + LA A I A+++ +PSLSL+GSIA++ + + WSFGP L +P+FD G+ K+ Sbjct: 302 RDLAADYASIAKARANRFPSLSLSGSIAISA-TTLAAPMSSWSFGPSLSVPLFDAGQRKA 360 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A+++ Q T++ +V A+KEVE AL +++ + + A E +++ +S Sbjct: 361 AVDSAQATYDAQLATYRSSVRTAVKEVEQALVALDGAARRSDDARQAAEQYRRYVSAIET 420 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 N+R G +LL + + R+ E+ L +R + ++ LY A+G G+ Sbjct: 421 NWRAGLDTLLTLEEARRSATTAEITLIELQRDRVRDWITLYKALGGGWQ 469 >gi|28869942|ref|NP_792561.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853187|gb|AAO56256.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 490 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 121/471 (25%), Positives = 222/471 (47%), Gaps = 44/471 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIA 68 I LL+ C VGP+Y KP + + D + WWE + D LN LV Sbjct: 24 IALLSACAVGPDYQKPSSAAPAQFKAAAGWRAATPSDAMAKGAWWEVYGDAQLNTLVARL 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----------------SYASISHRFIPNL 112 N T+ Q + A+ + S R FP+ S + S+ + Sbjct: 84 NTSNQTVAQYDAQYRQAQALVRSSRGAFFPTLDLTTGKTRSGQGAGTSSSGTSNTSASGI 143 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 144 RNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYMQLRVID 203 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+ + +D Y++++ L+ ++ G ++ + + ++KS ++D+ L + Sbjct: 204 EQKRLLESTVDAYQRSLTLTRNQYRAGIAGTDAVAQAQTQLKSTQADLIDLVWQRAQFEN 263 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLAD 287 I+ L+G +F N P IP I G+P+ L+ RPDI E+ + Sbjct: 264 AIAVLMGVAPADF---------NLPPTTTIPQLPQIPPGVPSQLLERRPDIAAAERSVMG 314 Query: 288 SVAKIGIAKSDLYP--SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIK 341 + A IG+AK+ YP +LS++G + ++F + N WS GP+L L +FD G+ Sbjct: 315 ANANIGVAKAAYYPDFTLSMSGGY---NSSTFANWISLPNRFWSVGPQLALTLFDGGRRS 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 372 AEVDRTEALYDQTVAQYRQTVLNGFQEVENYLIQLKVYEEEAAVRQEALVAARDSLRLTN 431 Query: 402 INYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ A + L++ + +L S V L A+G G+N Sbjct: 432 NQYKAGLIGYLDVVNVQATALSNERTVLNVLQSRLIAS-VQLIAALGGGWN 481 >gi|283779057|ref|YP_003369812.1| RND efflux system, outer membrane lipoprotein, NodT family [Pirellula staleyi DSM 6068] gi|283437510|gb|ADB15952.1| RND efflux system, outer membrane lipoprotein, NodT family [Pirellula staleyi DSM 6068] Length = 541 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 231/465 (49%), Gaps = 37/465 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSK----NLINIDTLKWWESFNDTSLNKLVKIALQQN 72 G VGP Y KP P+ N K +++ D WW+ FND L+ +++IA QQN Sbjct: 35 GFKVGPNYAKPAAPVSNDWIDSYNPKVQRGEMLSAD---WWKVFNDKRLDAVIEIAYQQN 91 Query: 73 LTILQATERINAAKENILSVRADLFPSS------YASISHR----------------FIP 110 ++I +A RI ++ +V +L+P S YA + + Sbjct: 92 ISIREAGFRIAESQAMRSAVAGNLWPQSQQLTGDYARLQRSQQTATFPQGGALPPGLLVT 151 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N S G W++D +G+ RR IE++ ANLD++ D A + +I++ +YID R Sbjct: 152 NYDNWSLGGAIG-WELDFWGRYRRSIEAADANLDASIEAYDDALVLLIAETASAYIDYRT 210 Query: 170 FKERISIAHQILDLYKKNIELS-HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 F++RI A + K++ ++ K + S++ + A + E+ + LE + R Sbjct: 211 FEQRIDYALTNIQQQKRSADIRVARKKAEAINSEIDAPQSLANLTRTEAAVHLLELAKRQ 270 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LLG P + L Y+ S P + + + +PA L+R RPD+R E+ +A Sbjct: 271 TQNRLAVLLGMPPHD-LSYILGPSRGV-PKVGDTVTLDVPASLLRRRPDVRRAERLVAAQ 328 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IGIA++DLYP++S+NG++ + N F S GP + + G++++ + Sbjct: 329 SEQIGIAQTDLYPTISINGALTMEASQFPNLFAPNAWQGSVGPGFRWNVLNYGRLRNLVS 388 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ +++ +Q+TVL A +E ENA+ S + KL+ +V ++++ + Sbjct: 389 VQDAILEQRIAAYQQTVLVANEEAENAIVSFLRYQMQRDKLEESVGYAQEAVRVVNQKED 448 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G+ + D+E + + + + ++ +AKS V +Y A+G G+ Sbjct: 449 KGQVDYTQVFDLETLLVQQQDEYATSQGNVAKSMVQIYKAMGGGW 493 >gi|148554076|ref|YP_001261658.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148499266|gb|ABQ67520.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 473 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 125/474 (26%), Positives = 215/474 (45%), Gaps = 35/474 (7%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------KWW 53 +LR + LL GP+Y +P P G I WW Sbjct: 1 MLRKLLLAGSALLTVAAAGPDYVRPAAP-------AGAEGPFIKAPAAPVTPAEPDQAWW 53 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPN 111 + D L++L+ AL N + A ++ A+ + RA P + S + +P Sbjct: 54 RLYQDPVLDRLIADALAANTDLRIAVANLDRARALLRESRAGRLPRTDVSAGANYGRLPA 113 Query: 112 LKTNSTGQLDSDW----------KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + G DW ++DLFG+ R IE++ + +A A D K+ + ++ Sbjct: 114 TQ-RPAGAEREDWSFDAGLSVSYEVDLFGRVGRSIEAARGDAQAAEAARDAVKVAIAAET 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y DA ER+++A + L L + + L+ +F G TSKL L + A + + + Sbjct: 173 ARAYADASSAVERLAVAERTLGLLDQVVGLTAKRFEAGRTSKLDLSRASALREQQRATLS 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L + ++TL G + + ++ + L PI +G L+ RPDIR Sbjct: 233 PLRAQRDAALFRLATLTGRTPVDLPPEVGARALTLR--LDRPIPVGDGRGLLARRPDIRE 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E+KLA A+IG+A +DLYP ++L GSI T + F G W GP L ++ Sbjct: 291 AERKLAAETARIGVATADLYPRIALGGSIGSTGPSLGDMFGGGPLRWLLGPLLSWNFPNQ 350 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 ++ I +A++S + + TVL A++E E AL++ + + L+ A + + Sbjct: 351 EAGRAKIAQAKASTRAALAGFDGTVLRALEETETALSAYGHELERSEALREAAAQAQTAA 410 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S R+GR L +LD ER +A + DL+ + ++ + VDL+ A+G G+ Sbjct: 411 TISRAQLREGRVDFLTVLDAERTSASADADLAESDARVTNAQVDLFRALGGGWQ 464 >gi|186472339|ref|YP_001859681.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194671|gb|ACC72635.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 500 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 130/493 (26%), Positives = 238/493 (48%), Gaps = 59/493 (11%) Query: 3 ILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI------------DT 49 + R+I + I L AGC VGP+Y +P + ++P F NS + ++ D+ Sbjct: 12 VQRSIVAAAIATLCAGCAVGPDYKRPDV-VVPAAFKEANSSDAGDVWQQAKPDPAASLDS 70 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF 108 +WW F D +L+ L + AL+ N T+ Q +A+ + S RA LFP+ S+A R Sbjct: 71 -RWWTVFGDGTLDDLCERALKANQTLAQYEAAYRSARAQVASSRASLFPTVSFAGSGTRS 129 Query: 109 IPNLKTNST-----------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVD 150 +N+T +L++ W+ DL+G RR +E S A+ ++ AQ+ Sbjct: 130 RTGTGSNTTPISSGSSTSSYASKSVSAELEASWEPDLWGSVRRSVEVSEASAQASDAQLA 189 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +L+V++ L Y R ++I + + + + L+ K+ QG +S + Sbjct: 190 GERLSVLATLAVDYFTVRAADADLAILEEERRIDAELLALTEAKYKQGVSSYDDVRTAHN 249 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 +++I+ I + + + R H I+ LLG P F +Q P L + +P+ Sbjct: 250 TLQAIDESIASAQLTRRQYEHAIAVLLGEPPAAFSLPVQADYRFDLPAL----PVALPST 305 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWS 325 L++ RPD+ E+ +A AKIG+AK+ +P+++L + H S P WS Sbjct: 306 LLQRRPDVVQAERTVAQYNAKIGVAKAGYFPTITLTADGGWSGTSFAHLISLP--TRFWS 363 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G + +FD G +++R A ++ ++ +++TVL+A ++VE+ L+++ +I ++ Sbjct: 364 LGLDVAQTVFDAGATSASVRAARANYDQEVAAYRQTVLSAFQDVEDYLSAV----QIASR 419 Query: 386 LQHAV-ELHKKSMSLSMI---NYRQGRYSLLDILDIERATA---KVEVDLSIAKRQLAKS 438 A E+ ++S L+ N+ G S +D+LD + K+ +D S Q A Sbjct: 420 QAAASNEVARRSGELAASQQRNFAAGTASRIDMLDTQLTQVEDRKIALDYSSTTLQNA-- 477 Query: 439 YVDLYIAIGSGYN 451 V L A+G G++ Sbjct: 478 -VLLVKALGGGWD 489 >gi|186474240|ref|YP_001861582.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184196572|gb|ACC74536.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 493 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 131/483 (27%), Positives = 226/483 (46%), Gaps = 45/483 (9%) Query: 1 MNILRAIFSLFIVLLA--GCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTL-- 50 +N +R ++ ++ A CT VGP YT P + P T G K + + Sbjct: 7 LNTVRTGWAWLPIMFALNACTTVGPNYTLPDNAAVNAPYANTTID-GADKAPVTQQAVPS 65 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSYASISHR-- 107 KWW ++D L++LV AL N + A N+ RA L F + S + Sbjct: 66 KWWRLYDDPVLDQLVTQALSSNTDL-------RVAASNLARSRAQLDFANEQGGFSGKTS 118 Query: 108 --------------FIPNLKTNSTGQLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVD 150 L + G LD ++IDLFG+ RR +E++ A+ ++ A +D Sbjct: 119 AAFQRAQESAEQYLLTEKLPVINEGALDLSVSYEIDLFGKLRRGVEAAKADDEAIEAALD 178 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +A++ V++ ++ +Y+++ + + IA Q L L K+ ++L+ G ++ + + + Sbjct: 179 LARITVVADVVRAYVESCSASQELEIAQQSLSLQKQRVKLTQRLRDAGRGNQPDVTRGQT 238 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + ++ +DIP R + ++ LL + S P L PI +G A Sbjct: 239 QADTLAADIPRFVARRRAAQYRLAMLLARAPSALPPAALACSK--LPQLKQPIPVGDGAA 296 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPD+R E+ LA S A+IG+A + LYPS+S+ GSI + D P N W+FG Sbjct: 297 LLRRRPDVRQAERLLAASTARIGVATAALYPSVSIGASAGSIGVAEDLFGPATN-RWAFG 355 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + G+ ++ + AE++ + VLNA++E + +L++ D L+ Sbjct: 356 PLISWTFPINGQ-RARVHEAEAATSGALAHFDGVVLNALRETQTSLSTYASDTTRADALR 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + +S + Y GR S L LD R V +S A+ Q+A V+L++A+G Sbjct: 415 TAYKSAIQSADETHRLYAAGRESFLSDLDATRTLTSVAAQVSAAEGQVALDQVNLFLALG 474 Query: 448 SGY 450 G+ Sbjct: 475 GGW 477 >gi|71735550|ref|YP_274834.1| outer membrane efflux protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556103|gb|AAZ35314.1| outer membrane efflux protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 489 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 39/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQTPSMAA-PAQFKAAEGWRAATPGDAMAKGAWWEVYRDPQLNS 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLVGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+AK+ YP +L+ G + T N N WS GP+L L +FD G+ Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRR 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 TAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLT 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G+N Sbjct: 430 NNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIAS-VQLIAALGGGWN 480 >gi|326385744|ref|ZP_08207373.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] gi|326209723|gb|EGD60511.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] Length = 506 Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 123/478 (25%), Positives = 231/478 (48%), Gaps = 49/478 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN------LINIDTL--KWWESFNDTSLNKL 64 + L GCTVGP+Y KP + P ++ +S + L + L WW+ F+D L++L Sbjct: 23 LCLGGCTVGPDYHKP-TAVAPADWTSWHSGSDALRPALADAAPLPPDWWQGFHDPVLDEL 81 Query: 65 VKIA------------------LQQNLTILQATERINAAKENILSVRADLFPSS---YAS 103 + A +Q+++T Q +++A+ + R F +S + Sbjct: 82 ERRAFAASPDLRTAALHFAQARVQRDVTASQGLPQVDASA-TVQGQRQSEFGASTRLFDE 140 Query: 104 ISH-------RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 I + + T G D+ W+ID +G+ RR +E++ A++ A +D A+L Sbjct: 141 IGGANRNALAKLLGEPYTLYKGGFDASWEIDFWGKVRRSVEAANADIAQQGALLDQARLT 200 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + S + +Y R + +++A +D ++ + + G + L + +++S Sbjct: 201 LASDVAQAYFSLRSAQRDLAMARADIDDLRERTRILAERTKGGLANHFDLERQHIDLRSA 260 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPAT--EFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E+ +P LE ++ I+ LLG P + + LH + + P+L +G+P+ + Sbjct: 261 EAQLPALEAQEASQINRIALLLGDRPGSLSDLLHPQESEVAGALPDL----TLGLPSAVA 316 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 RPDIR E +L ++ AKIG+A++DLYP++ L G+ L N F + W GP Sbjct: 317 LRRPDIRAAEARLHEATAKIGVARADLYPAIKLGGNFDLESYRASNLFEWGSHSWGIGPS 376 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LP+FD + + IR E +E +++++TVL A +E+++AL + ++ KL Sbjct: 377 VDLPLFDGARRRRTIRLRELEQKEAAVSFEQTVLRAWQEIDDALNAYQAERVENAKLAER 436 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 E ++++ L+ Y G + +D+LD RA + + + +L YV + AIG Sbjct: 437 REAARQALDLAQARYAGGIVTWIDVLDARRAYHQARRESWDSDARLGTRYVVVNKAIG 494 >gi|218512212|ref|ZP_03509052.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli 8C-3] Length = 164 Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 2/163 (1%) Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 QP IN GIPADLIRNRPDIR E+ LA + A IG+A++ LYPS+SL+GSI+ ++ N Sbjct: 1 QPVFRGGINSGIPADLIRNRPDIRVAERDLAAATANIGVAEAQLYPSISLSGSISPSYIN 60 Query: 316 --SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 G T WSFGP L LPIFD G++++N++ A+S A Y+ W+ TVL A+++VENAL Sbjct: 61 QRGIHGGLTPWSFGPTLNLPIFDGGRLRANVKSAQSDAATAYLNWKSTVLTAVEQVENAL 120 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ D + V LQ V+ ++++ LS +Y+ G SLLD+LD Sbjct: 121 AAVRRDAQTVAALQAQVKTTQETLELSTASYKDGASSLLDVLD 163 >gi|226944951|ref|YP_002800024.1| RND efflux system, outer membrane lipoprotein, NodT family [Azotobacter vinelandii DJ] gi|226719878|gb|ACO79049.1| RND efflux system, outer membrane lipoprotein, NodT family [Azotobacter vinelandii DJ] Length = 512 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 122/483 (25%), Positives = 229/483 (47%), Gaps = 43/483 (8%) Query: 5 RAIFSLFIVL---LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFN 57 R +S+ + L L GCT+GP+Y +P + P F G L + WWE + Sbjct: 12 RLAWSMTLALGLALGGCTLGPDYQRPQLSA-PDSFREGEGWKLATPADEAERGPWWEMYG 70 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNS 116 D L+ L++ + N T+ Q+ + AK + + +AD FP+ ++ R + Sbjct: 71 DPILDDLMRRLDESNQTVAQSIAQYLQAKATVRTAKADFFPTGRVTVDETRSATASGSGG 130 Query: 117 TGQLDS-----------------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 T +L W++D +G+ RR +ES A L ++ A + Sbjct: 131 TSRLPDGSTVSSGGGGGTISNSYNAVSNISWELDFWGKMRRQLESDRAGLQASAADLAAV 190 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L+ S L SY+ R + + ++ Y + + L+ ++ G +K + + + ++ Sbjct: 191 RLSQQSTLAQSYLQLRVLDGQRRLLKATVEAYARTLRLTENQYRAGMVTKADVTQAQTQL 250 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 KS E+ L+ H I+ L+G P +E ++ + P+L I +P+ LI Sbjct: 251 KSTEAQAIDLDYQRAQLEHAIAVLIGVPPSE----LELAELDSLPDL-PEIPTLLPSQLI 305 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGPK 329 RPD+ E+++ + A IG+AK+ +P+ SL+ G TH D F N W+ P+ Sbjct: 306 ERRPDVAAAEREVMSANALIGVAKAARFPTFSLSAAGGYRATHTDYWFEKDNRFWNISPE 365 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + L +FD G +++ + +A ++ Q+ T+++TVL++ +EVE+ L ++ ++ Q A Sbjct: 366 MALTLFDGGLLRAQVDQARATHQQAVATYRQTVLDSFREVEDYLVQLSVLERETRAQQEA 425 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGS 448 VE ++S L Y+ G ++D++ A E L++ +L S V L A+G Sbjct: 426 VEAAQESRRLMENQYKAGTVDYSSVVDVQTAALSNERTVLTLLSNRLTAS-VQLIAALGG 484 Query: 449 GYN 451 G++ Sbjct: 485 GWD 487 >gi|237752859|ref|ZP_04583339.1| cation efflux system protein cusC [Helicobacter winghamensis ATCC BAA-430] gi|229375126|gb|EEO25217.1| cation efflux system protein cusC [Helicobacter winghamensis ATCC BAA-430] Length = 474 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 121/460 (26%), Positives = 223/460 (48%), Gaps = 25/460 (5%) Query: 11 FIVLLA----GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F+ +LA GC++ P+Y+KP L + + NS+ ++ I KWWE F DT LN V+ Sbjct: 12 FVAILALGFGGCSLSPKYSKPTTNLPDIKEGLQNSE-VLEIKE-KWWEDFGDTQLNVFVE 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS---- 122 AL N +L A ERI A+ R+D +PS S N K + GQ ++ Sbjct: 70 EALVNNYDLLVAMERIEQARAQWGYARSDRYPS--LSAQGEATRNRKNLNLGQRENYNNF 127 Query: 123 ------DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 +++DL+G+ R + S+LA L + A D+ +L++++ ++ SY ++ Sbjct: 128 SLSAVLSFELDLWGRARDADRSALAKLLAIKANGDMVRLSLVANIMQSYFGVLTLNNQVQ 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I+ L +N E +F G S++ + + ++E+ S+++ + +L Sbjct: 188 ISQNTLKSRTENYEYRKKEFEAGKISEIDMQQAKSEMASVQAQLQSLLMEQNSAQSAFLI 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG K Q + P I G+P+ +++ RPDI E+ L + IG+ Sbjct: 248 LLGRDGKGMFE--NKIPTKPQALVSAPSIKAGLPSSILQKRPDIEAAEQNLKAANFSIGV 305 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A+S +P++SL G + F N+ W+FG + D G+ +N+ A+S Sbjct: 306 ARSVYFPTISLTGLFGYASPQLNELFRTSNSTWNFGGNFIGNLLDFGRTSANVDLAKSQY 365 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +E +T+ +T+ A EV +L ++ + + L+ VE ++++ L+ + Y +G S Sbjct: 366 REMLLTYGQTLRTAFGEVRESLFNVQMTNQRLNSLKEQVEALQRTLELANLRYAEGYVSY 425 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + A E++ A+ + + + LY A G G++ Sbjct: 426 LEVLSTQSALFAAELEQEGARLESLSATISLYKAFGGGWD 465 >gi|83747315|ref|ZP_00944356.1| OprM [Ralstonia solanacearum UW551] gi|207739107|ref|YP_002257500.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] gi|83726015|gb|EAP73152.1| OprM [Ralstonia solanacearum UW551] gi|206592480|emb|CAQ59386.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] Length = 522 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 215/465 (46%), Gaps = 37/465 (7%) Query: 20 VGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 VGP+Y P + + P + + + +WWE F+DT+L +L++ A + T+ Q Sbjct: 33 VGPDYRTPRLAGVEAPAGWHATLPHHGSRMMLARWWEQFHDTALTQLIEQAGADSPTLAQ 92 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---------HRFI--------------PNLK- 113 A R+ A+ ++ S RA L P S S +F+ P L Sbjct: 93 AVGRVREARASVSSSRAALLPQLKGSGSAVRQGGFGGSQFLGGAGGTGVSSTSVSPTLGL 152 Query: 114 ---TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T D+ W++DLFG +RR +E + A L+++ A A++ + +++ +Y+ R Sbjct: 153 GTFTTLAASADASWELDLFGGKRRGLEGADARLEASLADWHDARVTLSAEVANTYLQQRE 212 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++I L ++ ++L+ KF G + L + +A + + + + Sbjct: 213 CEALVAIGETTLASRRETLQLTERKFGAGFVAPADLAQAQATVADATNALESQRAQCEQG 272 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + TL G + A L K P+ P +PA ++ RPD+ E+ +A Sbjct: 273 LDQLVTLTGLDHAALAALLAPGKGRMPAPPDAGAPD---VPAQVLSQRPDVSSAERAVAG 329 Query: 288 SVAKIGIAKSDLYPSLSLNGSIAL-THDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIR 345 + A IG+A + PSL+L GSI + T S T WSFGP + LP+FD G + + Sbjct: 330 ASADIGVAVASRLPSLTLAGSIGINTFQISGQSLTTKSWSFGPSVSLPVFDGGSGAARVE 389 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + + ++ V A++EVE+AL ++ + + A + K + + YR Sbjct: 390 TARARYDQALAGYRAKVRQAVQEVEDALVRLDAAGRRLDAATVADAQYIKVLEAASARYR 449 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SLL + D+ R T L+ + + A+++V LY A+G G+ Sbjct: 450 LGAGSLLQLEDVRRTTLSASQALAAVQLERAQAWVALYKAVGGGW 494 >gi|107026811|ref|YP_624322.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116691996|ref|YP_837529.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|170736010|ref|YP_001777270.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|105896185|gb|ABF79349.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116649996|gb|ABK10636.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] gi|169818198|gb|ACA92780.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 495 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 123/479 (25%), Positives = 223/479 (46%), Gaps = 46/479 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVKI 67 LLAGCTVGP+Y P P + + +DT WW + ND L+ L+ Sbjct: 19 CLLAGCTVGPDYHG--APAAPDASTFVRAP-ATGVDTASPAPSAWWHALNDRQLDALIVA 75 Query: 68 AL---------------------QQNLTILQATERINAA---KENILSVRADLFPSSYAS 103 AL QQ + + AA +E +S L PS+ + Sbjct: 76 ALVYNPDLHAAQARLRAARAQLSQQRAAQMPKSSATVAAIRMREPDVSALGSLLPSNGSE 135 Query: 104 ISHRFIPNLKTNSTGQL-----DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 S P+L + QL D+ W+IDLFG RR +E++ A ++ A + ++++ Sbjct: 136 QSGGTSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADLADTQVSIA 195 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +Y+D R ++R++++ + L ++ +EL+ + +G + + +L ++++ + Sbjct: 196 AEVANAYVDLRDQQQRLALSKRTAQLQQQMLELTQQRRARGVAADADIERLTTQVENTRA 255 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + L+ ++ ++ L G A L + P L + IG PA L++ RPD Sbjct: 256 SLIPLDAQVTESLDRLAILTGR-APGALDAALSTPDAALPTLPGSVAIGDPATLLKQRPD 314 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYL 332 IR E++LA S A+IG +D +P ++L G + + + PG+ N W P L Sbjct: 315 IRAAERRLASSNAQIGEHVADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQW 372 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 I D G+ + +R AE+S E +Q+ VL A+++ AL ++ V L Sbjct: 373 NILDFGRTRGAVRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVVALTKVQTS 432 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ + +L K+YV + ++G G+ Sbjct: 433 AVHSRALMDQRYRAGVASMIDLLDTQREAFAAQQNVIAGQAELIKNYVSVQKSLGLGWQ 491 >gi|330809644|ref|YP_004354106.1| outer membrane efflux protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377752|gb|AEA69102.1| putative outer membrane efflux protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 493 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 225/472 (47%), Gaps = 43/472 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKLV 65 L + +L+ C VGP+Y +P P Q+ N + WWE + D LN LV Sbjct: 26 LCVAMLSACAVGPDYQRPQAAA-PVQYKEAQGWRQANPSDAMARGAWWELYGDAQLNGLV 84 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------------RFIP 110 N T+ QA + A+ + + R FP+ ++ Sbjct: 85 NQLNASNQTVAQADAQYRQARALVRNARGAFFPTVDLTVGKTRSSQGTGSSSSSLSSSSS 144 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ Q W+ D++G+ RR +E+ A+ +++A + +L+ S+L+ +Y+ R Sbjct: 145 GIRDTYNAQAGVSWEADVWGKLRRTLEADEASAQASFADLAAMRLSQQSELVQNYLQLRV 204 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y+++++++ ++ G + K ++ + + ++K+ + D+ L Sbjct: 205 IDEQKRLLQTTVDNYQRSLKMTENQYRAGVSGKDAVAQAQTQLKTTQGDLIDLIWQRAQF 264 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G P EF N IP I + +P+ L+ RPDI E+ + Sbjct: 265 ENAIAVLIGLPPAEF---------NLAETQDIPSLPQIPVALPSQLLERRPDIASAERSV 315 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP L+L+ S T+DN N WS GP+L + +FD G+ + Sbjct: 316 MAANANIGVAKAAYYPDLTLSLSGGYSSSTYDNWVSVPNRFWSVGPQLAMTLFDGGQRSA 375 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLS 400 + R ++ + T+++TVL+ ++EVEN + + ED+ V Q A++ ++S+ L+ Sbjct: 376 EVDRTVAAYDQTVATYRQTVLDGLREVENYMIQLKVLEDEARVR--QEALDAARESLRLT 433 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G + LD++ ++ E L + + +L S V L A+G G++ Sbjct: 434 QNQYKAGLIAYLDVVTVQATALSNERSVLGLQQSRLIAS-VQLIAALGGGWD 484 >gi|300309818|ref|YP_003773910.1| drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300072603|gb|ADJ62002.1| drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 483 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 20/454 (4%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 +L GC++ P Y +P P+ + + + + L W + F D L +L+ AL+ N Sbjct: 24 VLGGCSLAPTYERPQAPVESSYPADAAGRAELQAVNLGWRQFFPDQRLQQLIAAALENNR 83 Query: 74 TILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTN-STGQLD 121 + A I A+ RADL P+ + AS S P + + G Sbjct: 84 DLRTAVLNIEEARAQYQIARADLLPNLNLSGNAARTRTAASQSLTGQPTISNSYQVGLAV 143 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ R++ +++LA+ S A++++++++ +Y+ R + E++ +A + Sbjct: 144 PAYELDFFGRVRNLKDAALASYLSTEEAQKSAQISLVAQVAQAYLAERSYAEQLKLADET 203 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + N++L+ + GA++ L + ++S LE+ R N TLL Sbjct: 204 LKSRQSNLDLAQKRLDVGASTALDFRLTQTLVESARVAKTQLERQ-RAQAENALTLLVGK 262 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L Q S+ + I G+P+DL+ NRPDIR E+ L + A IG A++ + Sbjct: 263 KIGELPPAQLLSDE---KIVTDIPAGLPSDLLTNRPDIRSAEQSLLAANANIGAARAAFF 319 Query: 301 PSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P +SL G S + T F + WSFGP L LPIFD G+ +N+ AE + +T Sbjct: 320 PRISLTGNFGSASSTLGGLFESGSGAWSFGPSLSLPIFDFGRNSANLDLAEVRKNKAVVT 379 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + A +EV +AL + + V + + ++ + L+ + ++ G S LD LD Sbjct: 380 YEKAIQTAFREVADALVARGSLDEQVKAQEAFLAAQQERLKLTDLRFKNGIASSLDQLDA 439 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R + L A++ + +DLY A+G G N Sbjct: 440 QRDLFSAQQALIQARQLRLNNAIDLYKALGGGLN 473 >gi|209521511|ref|ZP_03270214.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498041|gb|EDZ98193.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 503 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 121/465 (26%), Positives = 229/465 (49%), Gaps = 28/465 (6%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGN----SKNLINIDTLKWWESFNDTS 60 ++ I LLAGC ++ P + +P MP+ P F + GN +N + W + F D + Sbjct: 20 LAVLIALLAGCVSLAPPFERPPMPV-PATFPDAHGNPTTGGENAPGAAAVGWQDYFIDPT 78 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN------- 111 L +L+ AL+ N + A +R+ A+ RAD FP+ A ++ +P Sbjct: 79 LQRLIGEALEYNRDLRLAIQRVEEARAMYGIRRADQFPTIGMEADLARARVPADLSGVGR 138 Query: 112 -LKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + N G + W++D +G+ ++ E++L N ++ A L VI ++ +Y++ Sbjct: 139 AVTANQFQVGVGLASWELDFWGRVANLKEAALQNYLASDAARQAVTLTVIEQVANNYLNL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ERI + ++ + +K+ + ++ G+TS+L L ++E + + L++ Sbjct: 199 RELDERIMLMNETIASREKSYRIFKHRYEVGSTSRLDLKQVETLWRQAVALGTQLQQERA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ + L+G P + H + ++N + + G+P+DL+ NRPDI E +L Sbjct: 259 TRLNALQVLVGKP-VDLPHEDIRLNDN---AVMADLPAGLPSDLLVNRPDIVSAEYQLRA 314 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A+++ +P ++L GS DN F G + WSFGP + LPIFD G+ ++N+ Sbjct: 315 ANANIGAARAEFFPKITLTGSFGTASTQLDNLFTGPSRAWSFGPSVSLPIFDMGRREANL 374 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ + +++ V +A ++V +A+ + + V L+ E + L+ + Y Sbjct: 375 DVTKAQRDQAVTSYELAVQSAFRDVADAIAARQWLAEQVDALRATEEAQAERARLAQMRY 434 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++LD +R + L +R L S V L+ A+G G Sbjct: 435 DHGASPFLEVLDAQRDLLAAQQQLVETRRALLSSRVSLFSALGGG 479 >gi|154491095|ref|ZP_02031036.1| hypothetical protein PARMER_01017 [Parabacteroides merdae ATCC 43184] gi|154088515|gb|EDN87559.1| hypothetical protein PARMER_01017 [Parabacteroides merdae ATCC 43184] Length = 456 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 119/460 (25%), Positives = 228/460 (49%), Gaps = 30/460 (6%) Query: 10 LFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +FIVL L C +G +Y +P + L P + G + +ID++ W + DT+L +L Sbjct: 7 IFIVLSLALALPSCKIGKKYARPELDL-PEEIVAG--ADTASIDSISWQSLYVDTTLQRL 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASI---SHRFI-----PNLK 113 + IAL N + A ++ KE I S R AD FP A I R P Sbjct: 64 ITIALDNNKDMKIAVAKV---KEMIASKRITFADQFPEIGARIYGQKERLNYGGDNPKPD 120 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +L W++DL+G R E+ +A + ++ +++++ +Y + + Sbjct: 121 SEYGAKLALSWELDLWGNLRWANEAGIAAYLQSVEARHALQMTLVAEVAAAYYELCALDQ 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 I L ++ + L+ L+F G TS+ S + + E+ E+ +P+LE+ ++ ++ Sbjct: 181 EQDIVRHTLAARREGVRLAKLRFEGGLTSETSYSQAQVELARTETLLPSLEQKIKIKEND 240 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ LLG + + + + + L +G+P+ L+ RPD+R E+KL ++ A + Sbjct: 241 LAFLLGQYSGDIPRGLPLREQHLLETL----PVGLPSSLLERRPDMRQAEQKLREANAGV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A++DL+P +SL G++ ++ +F + W L P+F GK K+ ++ A + Sbjct: 297 GVAQTDLFPKISLTGNLGFENEELTNFIK-SPAWFLAGDLLQPLFAMGKNKAKLKAARAR 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ +Q++VL+ KEV NA+ +I + K++ + + + L+ + Y G S Sbjct: 356 YEQEVYNYQKSVLSVFKEVNNAIVTIRKAKEVRMSYEKLLNAADTYLQLAQLQYINGVTS 415 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 416 YMDVLDAQRGLLDAQLSLNKAMLDELLSTVYLYKALGGGW 455 >gi|91774525|ref|YP_544281.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91708512|gb|ABE48440.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 493 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 116/453 (25%), Positives = 224/453 (49%), Gaps = 29/453 (6%) Query: 17 GC-TVGPEYTKPHMPLLP--TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC ++ P+Y +P P+ Q G + + +L W + F DT+L L++ AL N Sbjct: 30 GCQSMAPDYERPAAPVAEHFPQAGTGTA----DAPSLAWQDYFADTTLQDLIQEALANNR 85 Query: 74 TILQATERINAAKENILSVRADLFPS--SYASISHRFIPN----------LKTNSTGQLD 121 + A +R+ A+ RADLFP + S P L G Sbjct: 86 DLRSAIQRVEGARALYGVQRADLFPGLNAQGSFGRSRTPEDMSLIGRPMVLSEYRVGFGI 145 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++W++D +G+ R + +++L +A + + +++++++ SY++ R +RI IA + Sbjct: 146 TNWELDFWGRIRSLRDAALETFLAAESAQRASAISLVAQVANSYLNLRELDQRILIAEKT 205 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ ++++ + +F G+TSKL L +++A + ++ L++S + ++ ++ L+G P Sbjct: 206 IESRQESVRIFQRRFDVGSTSKLDLKQVQALLAQAQTLRYQLQQSRAIELNALTLLVGKP 265 Query: 241 ATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + S+ F + + + G+P+D++ RPDI E L + A IG A++ Sbjct: 266 VD-----LPPASHAFSETKMLHQLKPGLPSDVLTQRPDIIAAEHILKSANANIGAARAAF 320 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P ++L S+ D F + WSF P + LPIFD + +SN+ A Sbjct: 321 FPRVTLTTSLGTASRELDGLFDTGSHAWSFAPSISLPIFDGWRNRSNLELANVRRDLAVT 380 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++++T+ A +EV +AL + + ++ + Q ++ + L+ + Y G S ++LD Sbjct: 381 SYEQTIQTAFREVADALAAQHSIRQQLVSQQEMLDAQAERARLAKLRYDHGATSYFEVLD 440 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER+ +VE L +R L S V LY A+G G Sbjct: 441 AERSLLEVEQQLVQMQRALFSSQVSLYAALGGG 473 >gi|237748467|ref|ZP_04578947.1| RND efflux system outer membrane lipoprotein [Oxalobacter formigenes OXCC13] gi|229379829|gb|EEO29920.1| RND efflux system outer membrane lipoprotein [Oxalobacter formigenes OXCC13] Length = 487 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 37/468 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I + F L GC +GP+Y +P MP + + + + +D+ +WWE F D LN +V+ Sbjct: 10 IVAAFSASLGGCMMGPDYRRPDMPTPQSYRFMPDQASQQALDS-RWWEDFGDPVLNGMVE 68 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR-----------FIPNLK 113 A+ N + A A I+ RA LFP ++ A + +PN + Sbjct: 69 EAIANNRDLKAALANSEKAAAAIMQTRAGLFPQINATAQVGRERLSEMDAEPVIGVPNPQ 128 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + L + W+IDL+G+ RR E++ A+ + A L+++S ++ Y++ E Sbjct: 129 NAKSASLGASWEIDLWGKIRRMTEAAEADAKAMEQTRRAALLSIVSNVVTQYVNLLALDE 188 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IA Y++++ + L+F G TS++++ + ++ ++ +S IP + + + Sbjct: 189 QLKIAQNTSANYRESLRIIDLQFKYGVTSQMTVAQAASQYETAQSQIPQIRHNITQTENA 248 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN----RPDIRYQEKKLADS 288 I+ L G + + L P+ +PADL N RPDI E+ L + Sbjct: 249 INILRGRNPGAV------ERGSTLATLKTPV---VPADLPSNLLLRRPDILSAEQDLVAA 299 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG ++ +P++SL G+ + + N F G + WSF + LPIF G I S ++ Sbjct: 300 NAMIGATRAMYFPTISLTGAFGTSSEHLRNLFKGPSKAWSFAGGISLPIFQGGSIYSQVK 359 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMI 402 +AE+ + ++ V +A +V+NAL+ +NE T+L + ++ + + L+ + Sbjct: 360 QAEAGQRAALARYEGAVQSAFADVDNALSYRQRVNEQLDKETRLVNQLKDYSR---LAKL 416 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y +G + +L +++ ++ L+ + S V +Y ++G G+ Sbjct: 417 QYDEGYSAYSVVLQADQSLFPRQLTLAQLRASSLTSVVGVYKSMGGGW 464 >gi|237801370|ref|ZP_04589831.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024229|gb|EGI04286.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 364 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/337 (29%), Positives = 183/337 (54%), Gaps = 7/337 (2%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD W++DLFG+ +R +E+S A+ D+A A + ++ +I++++ +Y R + R +IA Sbjct: 29 LDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIAK 88 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L +K+ +++ G ++L +++ +A + ++E+ +P L+ H I+TLLG Sbjct: 89 DNLTNQQKSQDITTQLRDAGVGNELDVMRSDARLAAVEATVPQLQAEQARQTHRIATLLG 148 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + S + P + + IG ++RNRPD+R E++LA S A+IG+A +D Sbjct: 149 ERPESLSVDL---SPSKLPAIAKALPIGDATQVLRNRPDVRAAERQLAASTARIGVATAD 205 Query: 299 LYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+P +SL+G + T S G + WS GP + FD G +++ IR A++ A+ Sbjct: 206 LFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGAL 265 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ VL A++E ENA + N+ ++ + L E + + L+ + YR+G L +L Sbjct: 266 ANYEQQVLLALEESENAFSDYNKRQQRLVALMRQSESSRAAARLASVQYREGTADFLVLL 325 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 D ER E + A+ L + V +Y A+G G+ P Sbjct: 326 DAERERLAAEDSQAQAEIDLYRGIVAIYKALGGGWQP 362 >gi|288573271|ref|ZP_06391628.1| RND efflux system, outer membrane lipoprotein, NodT family [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569012|gb|EFC90569.1| RND efflux system, outer membrane lipoprotein, NodT family [Dethiosulfovibrio peptidovorans DSM 11002] Length = 525 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 116/425 (27%), Positives = 208/425 (48%), Gaps = 33/425 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW S D +L +L+ +L+ N + A A+ + +A L P + + F N Sbjct: 69 WWNSLGDETLTRLILASLENNRDMASARSSFAEARAALGISKAALLP--WLDSAGSFT-N 125 Query: 112 LKTNSTGQL---------------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +KT L D+ W+IDLFG Q I++S A+L + Y + + ++ Sbjct: 126 MKTGENASLTGSQVGPIDLYKLGIDASWEIDLFGGQALKIKASAADLQARYGALHNSWVS 185 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + S++ +YI R ++R+ +A + L L +EL ++ G +L+L + + ++ Sbjct: 186 LSSEVALNYISLRTLQKRLMVAEKNLGLQNATLELLQSQYDSGLADELALSQAKYTMEQT 245 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YP---ATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 S IP ++ ++ ++ L+G P A E Y + P+ +GIPAD Sbjct: 246 RSSIPPIKTGIEEAMNRLAILVGQVPGSLAEELFDYEE------LPDPEKIDLVGIPADF 299 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFG 327 IR RPDI E++LA +A+ ++ D P SL GSI L +S G + +S G Sbjct: 300 IRQRPDIYMAERQLAAQIARKDASRKDFLPKFSLFGSIGLESYSSAGGLSVSDGGVYSIG 359 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 PK+ PIF G I+ NI+ ++ +++TVLNA+ EV NALT+ +++ L Sbjct: 360 PKISWPIFHGGAIRKNIKVQTEKQKQALANYEQTVLNAVAEVRNALTAETQERLRNESLG 419 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE +M+++ Y G +++ +RA +E L++++ ++ + V ++ A+G Sbjct: 420 RGVESAASAMAVAEDQYVNGLTDFNNVIIAQRALLDLEEQLAVSEGEMLSNLVRIFKALG 479 Query: 448 SGYNP 452 G+ P Sbjct: 480 GGWAP 484 >gi|253995459|ref|YP_003047523.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera mobilis JLW8] gi|253982138|gb|ACT46996.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera mobilis JLW8] Length = 498 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 134/470 (28%), Positives = 234/470 (49%), Gaps = 38/470 (8%) Query: 14 LLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 +L+ C VGPEY K L P Q ++ N K N D KWWE F D L + V +AL Sbjct: 15 ILSSCAVGPEYKKVDASL-PDHYLGQVALDNRKATTNADFAKWWEGFGDPQLTQFVALAL 73 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NSTGQL------- 120 QN I QA RI AK + + A L PS +IS + I N ++ + GQL Sbjct: 74 AQNFDIAQAQARIQQAKSGLSAAHAALIPSG--NISAQTIRNHQSLESPLGQLLNATPGY 131 Query: 121 -----------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ W++D+FG +R ++LA +A A +L V ++ +YI R Sbjct: 132 NRDANLYEANFNASWELDIFGGLKREQNAALAEYQAAKAGAVATRLAVAAQTADTYITIR 191 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + R+ IA + L+ ++ + ++ ++G KL + + EA + +E+ IP LE + Sbjct: 192 GLQSRLDIAKKQLETQQQLVTKVNILHSRGLAPKLQVQQAEAAVAQVEATIPVLEAGLDV 251 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 ++ + +LG ++ + + + F+P P ++G PADL++ RPD+ E+KLA Sbjct: 252 AMNALDVMLGAAPGKY----RSELSTFKPIPAAPQIASVGSPADLLQRRPDLIVAERKLA 307 Query: 287 DSVAKIGIAKSDLYP----SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + AKIG A S+ YP SL + + A++ N F + L +FD G+I + Sbjct: 308 IANAKIGQAISEYYPKVALSLLIGSATAISGGNLFSSAANQAAGVIGLRWRLFDFGRIDA 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I A+ E ++++ L A ++VENA++++ + ++ L + ++ S I Sbjct: 368 QIDHAKGQEAETLAAYRQSTLRAAEDVENAISALVKREQQTASLARGEQSMSQARESSFI 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y++G SL+++L + K+ + A+ + A+S V + A+G G+ P Sbjct: 428 AYQRGVVSLIEVLHADENLLKISDAKAQAQTESARSAVAAFKALGGGWLP 477 >gi|223934898|ref|ZP_03626817.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223896351|gb|EEF62793.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 489 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 121/468 (25%), Positives = 228/468 (48%), Gaps = 33/468 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNK 63 L + +AGC VGP+Y +P ++P + G ++ +I WWE F D+SLN Sbjct: 19 GLVTLFVAGCAVGPDYKRPEATVIPPAYKEGTNGWKLAEPQAHIPRGAWWEIFQDSSLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASIS-HRFIPNLKTN--STG 118 L A + N + A E A+ + R+ +P + S++ R N N S G Sbjct: 79 LETEAAKANQELQVALESFEQARALLSVARSGYYPHIEAIPSVTRERDSANRPINGVSIG 138 Query: 119 Q----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + LD +++D++G+ RR +ES+ A + ++ + KL++ +++ Y + Sbjct: 139 RADTFNTFSFPLDLSYELDVWGRVRRSVESAKATMQASADDLATVKLSIQAEVANDYFNL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R IS+ + ++ K++EL+ + G S L + + E +K+ E+ +P + Sbjct: 199 RALDSEISLLRSNVVVFGKSLELTRNRRAGGVASDLDVSQAETILKTTEAQLPAIALQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKL 285 H ++ L G PA+ F S P L P N+ G+P+DL+ RPDI E+ + Sbjct: 259 KAEHALAVLTGKPASSF-------SVPEMPFLAQPPNVPSGLPSDLLERRPDIATAERLM 311 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A + A IG+AK+ YP++ +NG ++ F + W+ GP + LPIF+ G+ ++ Sbjct: 312 AAANAGIGVAKAAFYPTIKINGLAGFESVSAGTLFDWPSRFWAVGPSIKLPIFEGGENRA 371 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A+++ +E ++++VL A EVE+ L + + A++ +K++ ++ Sbjct: 372 NLTHAQAAYRENVARYRQSVLVAFSEVEDNLAAQHLLWSQQEAENAALKAAEKTLEIANN 431 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G + L++ + A E + + + S V L ++G G+ Sbjct: 432 RYRAGLVTYLEVATAQNAALDRERENVRLRGERLLSTVSLIKSLGGGW 479 >gi|325272589|ref|ZP_08138951.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324102273|gb|EGB99757.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 496 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 132/481 (27%), Positives = 231/481 (48%), Gaps = 58/481 (12%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + +L+ CT+ P+Y +P + QF I WWE + D LN L Sbjct: 27 GLCVAMLSACTLSPDYQRPALDSTAAQFKHAEGWTQATPSDAIARGAWWEIYGDAGLNAL 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q+ + + A+ + S RA LFPS S S N TG Sbjct: 87 VEELNRSNQTVAQSEAQYHQAQALVRSSRASLFPSLDLSASK----NRSAQGTGSSSSSL 142 Query: 119 -------------QLDSDWKIDLFGQRRHIESSLANLDSAYAQV-DIA--KLNVISKLIP 162 QL W+IDL+G+ R S AN SA A + D+A +L+ S+L+ Sbjct: 143 SNNSSGIRDTYNAQLGVSWEIDLWGKLRETLS--ANQASAQASLADLASIRLSQQSELVQ 200 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R E+ + + Y++++ ++ ++ G ++ + ++KS ++D+ L Sbjct: 201 NYLQLRVLDEQKRLLEATVAAYQRSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDL 260 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDI 278 + I+ LLG P +F N + IP I + +P+ L+ RPDI Sbjct: 261 IWQRAQFENAIAVLLGKPPADF---------NLADSKAIPALPRIPVSLPSQLLERRPDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYP--SLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLP 333 E+ + + A IG+A++ +P SLS+NG + + N++ P N +WS GP+L L Sbjct: 312 AAAERNVMAANANIGVARAAYFPDLSLSMNGGYSSSSFNNWIELP--NRYWSVGPQLALT 369 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVE 391 +FD GK + + R + + +++TVL++ KEVEN L + D+ +V Q A++ Sbjct: 370 LFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDSFKEVENLLVQLKVYGDEAVVR--QEALD 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGY 450 ++S+ L+ YR G LD+++++ E L++ + +L S V L A+G G+ Sbjct: 428 AARESLRLTENQYRAGLIGYLDVVNVQATALSNERSVLNLLQGRLVAS-VQLVAALGGGW 486 Query: 451 N 451 + Sbjct: 487 D 487 >gi|254521806|ref|ZP_05133861.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] gi|219719397|gb|EED37922.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] Length = 470 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 120/471 (25%), Positives = 221/471 (46%), Gaps = 27/471 (5%) Query: 4 LRAIFSLFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +R++F F+ LA CT+GP++ +P L ++N I+ D WW F D Sbjct: 3 VRSVFQTFVAATLCTGLAACTMGPDFVRPQAELPSHWQGEAVARNAIDQDA-AWWAGFYD 61 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK----- 113 L +L L NL + A R+ ++ AD PS AS S N + Sbjct: 62 PLLGQLASQVLAANLDLQLAANRVQQSRAARGVSAADRLPSVSASASGLRARNSEVGLSD 121 Query: 114 -TNSTGQLDSD---------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + + G+ D W++DL+G+ RR +E++ A + A ++ ++++ Sbjct: 122 PSGNGGREDYGLFQAGIGLSWELDLWGRVRRQVEAADARVQMAEEDAHAVRIALLAETAR 181 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ R ++ +I L + L+ + QG S L + A++ S+++ I L Sbjct: 182 DYLQLRATRQLRAITEDNLSIAHDIKRLTEARQRQGVASTLHVSSAAAQVASLQARIAPL 241 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ LL P +Q ++ P L + +G+P++L RPDIR E Sbjct: 242 QHRESQLRNALAFLLAQPPQALDAQLQDARRDW-PALP-AVAVGVPSELAERRPDIRRAE 299 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGK 339 L + A IG+A++ P ++LNG + G+N H +S GP + LPIF G+ Sbjct: 300 AALHAATAGIGVAQASFLPRITLNGDAGFQARQLDDLDGWNAHRFSIGPSISLPIFQGGR 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +K+N+ + Q+ + ++ TVL A EV++A+ +++ +L AVE + ++ Sbjct: 360 LKANLALSRLQQQQSALQFRRTVLQAWHEVDDAIDGYAAEQQRTVQLHVAVEESEMALGA 419 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ G +LD+L +R + L+ ++ A + V+LY A+G G+ Sbjct: 420 ARRQYQAGVVDMLDVLTTQRIALDNQAALANSQATAAIARVELYRALGGGW 470 >gi|329118132|ref|ZP_08246844.1| outer membrane efflux protein OprM [Neisseria bacilliformis ATCC BAA-1200] gi|327465792|gb|EGF12065.1| outer membrane efflux protein OprM [Neisseria bacilliformis ATCC BAA-1200] Length = 481 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 116/447 (25%), Positives = 217/447 (48%), Gaps = 19/447 (4%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 CT+ P+Y +P + + P F ++ I L W + F D L++L++IAL++N + Sbjct: 21 CTMIPKYQEPQVAV-PETFRYDDTPATIRAAALGWQDYFADPRLHRLIEIALERNTDLRT 79 Query: 78 ATERINAAKENILSVRADLFPS---SYASISHRFIPNL--------KTNSTGQLDSDWKI 126 A A +E RA LFP+ S + R +L ++ S G + +++ Sbjct: 80 AALNAEAMREQYRISRAALFPTLSGSGSGTRQRTAADLSGGSPAISESYSVGLGVTSYEL 139 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ R + +++L ++ A D L++I+ + +Y + R +E +++A ++L + Sbjct: 140 DLFGKARSNKQAALEGYFNSTATRDATHLSLIASVAKAYFNERVAEENMALAQKVLKSRE 199 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + LS ++ G S + L + EA I++ ++ + +S + ++ L+ P L Sbjct: 200 QTYRLSEIRHKAGVISAIDLRQQEALIEAAKASYESAVQSREQARNALAVLINRPIPADL 259 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 F + + G+ +D++ NRPDIR E L + A IG A++ +PS++L Sbjct: 260 PAGLPLDKQF---TFDGLTAGLTSDVLLNRPDIRAAEHALKQANANIGAARAAFFPSITL 316 Query: 306 NGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 GS+ + N F N WSF P + +PIF G +K ++ A+ + Q + ++ V Sbjct: 317 TGSVGTASNELNNLFKAGNGTWSFAPGINIPIFTWGSLKGSLNAAKIRKEIQVVNYEAAV 376 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 +A ++V NAL + + K + + L + Y+ G S LD+LD ER++ Sbjct: 377 QSAFQDVSNALVAREQLDKTYQANARQSTAYADQLRLVRLRYKHGVSSALDLLDAERSSY 436 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L + ++ DLY A+G G Sbjct: 437 TADTTLLANQLTRLENMADLYKALGGG 463 >gi|222110502|ref|YP_002552766.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221729946|gb|ACM32766.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 514 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 220/465 (47%), Gaps = 24/465 (5%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 ++ VLL C TVGP+Y +P + + +++ + + D +WW +D L++L+ Sbjct: 27 LAMSCVLLTACATVGPDYREPPPVDIGSGWTLPLASESQSADLARWWSVLDDPILDRLMN 86 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HR------------FIPNLK 113 AL QNL + QA RI+ A+ V + P+ A +S +R IP L Sbjct: 87 TALAQNLDLRQAAARIDEARALRDRVAGERLPTVGAGVSVNRRRQSENGPLPVGSIPGLD 146 Query: 114 TNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T D+ W+ DLFG +RR +E + A L + + ++ V +++ ++ A Sbjct: 147 ATQTIYDAGFDAAWEADLFGAKRRALEGASARLQATEVEAQGVRMRVAAEVARTWFTAVG 206 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + LD ++ +EL L+ G S + A+ ++ + +P ++ R Sbjct: 207 AGYELHAQQATLDTLQQTLELVRLRHALGDASAADVEAAYAQWTAVNALLPDIQARQRAA 266 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V + LLG P L + P + +G ADL+R RPD+ E++LA S Sbjct: 267 VLGLGVLLGSPPERELALLD---GPLAPCTLRALPVGERADLLRRRPDVLAAERRLAASS 323 Query: 290 AKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG+A ++L+P LS+ G AL+ + F ++ +S P + +FD G++++ IR Sbjct: 324 ADIGVATAELFPKLSIGVGGGFQALSTGDWFDASSSRFSILPLISWRLFDGGRVRAEIRA 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E++ Q+ + +++ VL A+ + E AL + + + A++ + S + Y Sbjct: 384 REAAEQQAALAYEQAVLAALGDAERALGDYHGGLDTLERRAMALDAARTSYGYAKARYAA 443 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++L +R+ E + A A V LY A+G G++ Sbjct: 444 GDVALVELLAAQRSLHDAETAAARAHTSAAVQLVALYKALGGGWD 488 >gi|209516917|ref|ZP_03265766.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209502586|gb|EEA02593.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 489 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 220/469 (46%), Gaps = 34/469 (7%) Query: 14 LLAGCTVGPEY-----TKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKI 67 LL+ CTVGP Y P T N+ + + WW + +D LN LV Sbjct: 22 LLSACTVGPNYRGAPAVAPEAASAATFVRTPAKGNVTSAPAPRQWWLALDDPQLNTLVAA 81 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNS-------- 116 A N + A R+ A++ + RA FP + A++ R P+L S Sbjct: 82 AFAHNPDLRAAQARLRASRAQLQQQRAAEFPKLTADAAAVRTR-EPDLSAFSSGSGSSAA 140 Query: 117 ----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T D+ W+IDLFG RR IE++ A ++ A + A++++ +++ +YI Sbjct: 141 SSGRGPLSLYTAGFDASWEIDLFGGTRRAIEAASAQSEAVDADLADAQVSLAAEVAEAYI 200 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++R++IA + DL ++ L+ + G + + + +L ++++ + + L Sbjct: 201 SLRDQQQRLAIAQRTADLQQQMFALTEQRRAGGTAADVDVERLTTQVENTRATLMPLAAQ 260 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +++ ++ L G A L S+ P + + + PA ++ RPDIR E++L Sbjct: 261 VEISLDQLAVLTGK-APGALDAELAGSHAL-PTVPASVPVSDPASMLSQRPDIRAAERRL 318 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 A S A+IG +D +P L+L G ++ T + F N W P L +FD G+ Sbjct: 319 ASSNAQIGEHIADFFPKLTLYGDLSFTAGDPAHLFRKANATWLGAPYLSWNVFDFGRTLG 378 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + AE+S E ++++VL A+++ + L+ ++ + LQ +S L+ Sbjct: 379 AVHGAEASRDEAIANYEKSVLAALQDANDGLSRFGHQREHLATLQKVQASAVRSADLTRQ 438 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G SL+D+LD +R + D+ + +L K +V L ++G G++ Sbjct: 439 RYRAGTTSLVDLLDTQRVEFAAQQDVVSGQAELLKDFVSLQKSLGLGWS 487 >gi|307609461|emb|CBW98955.1| hypothetical protein LPW_07401 [Legionella pneumophila 130b] Length = 445 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 112/388 (28%), Positives = 198/388 (51%), Gaps = 38/388 (9%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHM------PLLPTQFSIGNSKNLINIDTLKWWESFN 57 R + LF I L GCTVGP+Y +P + P + I +S + L WW++F+ Sbjct: 3 RKLALLFSISCLFGCTVGPDYQRPDIKIQEKWPTSTVEKKISSSAPV----HLTWWKAFH 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIP 110 D L++ + A NL I A RI A+ A+ +P S IS + Sbjct: 59 DPLLDRYISEAATNNLDIKAAEARIRQARTMKQISLANFYPQINGSASANSLQISKGTLE 118 Query: 111 NLKTNSTG-------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + NS D+ W++DLFG+ RR +E+S A+L+ AY L+ Sbjct: 119 GIFANSPTYTLIDRNQWIYNLGFDAQWELDLFGKTRRKVEASKASLEEAYESRRTILLST 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SYI+ R ++ IA + ++L +K + L ++ G +S++ + E ++K+ E Sbjct: 179 IAEIARSYIELRGAQQLYGIAQKNVELQRKTLALVRQRYKAGVSSEVDVSLAEGQLKNTE 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P ++N + I+ +LG L + K + +P +P +G+ +D++R RP Sbjct: 239 SVLPNYITQIQVNAYQIAVMLGKDPQTILKDIAKIQSLPKPPQKVP--MGLRSDILRQRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHWSFGPKLYL 332 DIR E++LA +VA+IG+A +D +P +L+ S + + D F + W GP++ L Sbjct: 297 DIRATERQLASAVAEIGVAVADFFPQFNLSVSNLAFQSTSVDTLFQSSSGFWLMGPQVSL 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQE 360 PIF G+I++N+ ++ AQ+ I +++ Sbjct: 357 PIFHGGQIRANVESKKAVAQQAAIQYKK 384 Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 22/117 (18%) Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 G++ W L +F GK + + +++S +E Y + + +L+ I E+ + + Sbjct: 140 GFDAQWE------LDLF--GKTRRKVEASKASLEEAYESRRTILLSTIAEIARSYIELRG 191 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 +++ Q VEL +K+++L Y+ G S EVD+S+A+ QL Sbjct: 192 AQQLYGIAQKNVELQRKTLALVRQRYKAGVSS--------------EVDVSLAEGQL 234 >gi|298487211|ref|ZP_07005260.1| Heavy metal RND efflux outer membrane protein, CzcC family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158235|gb|EFH99306.1| Heavy metal RND efflux outer membrane protein, CzcC family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 489 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 221/472 (46%), Gaps = 39/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQAPSMAA-PAQFKAAEGWRAATPGDAMAKGAWWEVYRDPQLNS 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLSAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTRNQYRAGISGSDAVAQALTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLMGMAPADF---------NLPASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+AK+ YP +L+ G + T N N WS GP+L L +FD G+ Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRR 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 370 TAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLT 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G+N Sbjct: 430 NNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIAS-VQLIAALGGGWN 480 >gi|94312521|ref|YP_585731.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93356373|gb|ABF10462.1| multidrug/solvent efflux outer membrane protein, RND family [Cupriavidus metallidurans CH34] Length = 491 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 127/474 (26%), Positives = 212/474 (44%), Gaps = 53/474 (11%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGNSKN--LINIDTLKWWESFNDTSLNKLV 65 +L+GCT+ P Y +P P+ P ++ K+ + W E F D L L+ Sbjct: 14 VLSGCTMAPHYDRPAAPVAGGYPAAPEGYASAEVKSGETRRATEIGWREFFTDPRLQGLI 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--------------SYASISHRFIPN 111 + AL+ N + A RI A+ RADL P+ + + I F N Sbjct: 74 EAALENNRDLRTAALRIEEARAQYQIQRADLLPTVNANAGFQRGRFSGASSGIDQSFTGN 133 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + G + W++D FG+ R + ++LA + A ++++S++ +Y+ R F Sbjct: 134 VY--QVGLSVTQWELDFFGRVRSLSNAALAQYLATEEAHRAAYISLVSEVAKAYLAERAF 191 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ +A + EL+ +F+ GATS L L E+ + L + Sbjct: 192 AEQYDLARDTYKARQSTYELAQKRFSAGATSALDLRDNESLVAQARVAAAQLARQRAQAQ 251 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-----------GIPADLIRNRPDIR 279 + + L+G P E PNL P+ + G+P++L+ RPDIR Sbjct: 252 NALEVLVGKPIAEI------------PNLPAPMRLSDEHIISDIPEGLPSELLTQRPDIR 299 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E++L + A IG A++ +P +++ G+I+ + N F WSF P+L LPIFD Sbjct: 300 QAEQQLLSANANIGAARAAFFPRITMTANAGTISTSFTNLFDSGAHVWSFAPQLVLPIFD 359 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ SN+ + Q +++T+ A EV +AL + + V + + Sbjct: 360 YGRNMSNLDLSNVRKNIQIANYEKTIQTAFSEVADALVARGTLEDQVAGQEQQRDAEAAR 419 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSG 449 L+ + +R G S LD LD +R E DL +A RQL + +DLY A+G G Sbjct: 420 YELARMRFRSGVASYLDELDAQRQLFSAEQDL-VAARQLRLVNSIDLYRALGGG 472 >gi|77458749|ref|YP_348255.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382752|gb|ABA74265.1| putative outer membrane efflux protein [Pseudomonas fluorescens Pf0-1] Length = 489 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 119/473 (25%), Positives = 224/473 (47%), Gaps = 41/473 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKL 64 SL + +L+ C VGP+Y +P + + D+L WWE + D LN+L Sbjct: 20 LSLCVAMLSACAVGPDYQRPQTAEIAQYKEAEGWRQANPSDSLARGAWWELYGDRQLNQL 79 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------------RFI 109 ++ N T+ Q+ + A+ + S R +PS S Sbjct: 80 IEKLNSSNQTVAQSEAQYRQAQALVRSARGAFYPSVDLSAGKTRSSQGTGSSSSSLSSSS 139 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ QL W+ D++G+ RR +E++ A+ ++YA + +L+ S+L+ +Y+ R Sbjct: 140 SGIRDTYNAQLGVSWEADVWGKLRRGLEANEASAQASYADLAAMRLSQQSELVQNYLQLR 199 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ + + Y+++++++ ++ G + + ++ + + ++K+ + D+ L Sbjct: 200 VIDQQKRLLESTVAAYERSLKMTMNQYNAGVSGRDAVAQAQTQLKTTQGDLVDLIWQRAQ 259 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKK 284 + I+ L G P EF N IP I + +P+ L+ RPDI E+ Sbjct: 260 FENAIAVLTGQPPAEF---------NIAETQDIPKLPQIPLSLPSQLLERRPDIASAERS 310 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + + A IG+AK+ YP SL+ G + T N N WS GPK+ LP+FD G Sbjct: 311 VIAANANIGVAKAAYYPDFSLSMSGGYSSSTSQNLISLPNRFWSVGPKMTLPLFDGGIRS 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSL 399 + + R E+ + +++TVL+ +EVEN L + ED+ V Q A++ + S+ L Sbjct: 371 AEVDRTEAVYDQTVAKYRQTVLDGFREVENYLVQLKVYEDEAAVR--QEALDAARDSLRL 428 Query: 400 SMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y+ G + LD++ ++ A + L+I + +L S V L A+G G++ Sbjct: 429 TENQYKAGVIAYLDVVTVQATALSNERTVLNILQSRLIAS-VQLIAALGGGWD 480 >gi|297250450|ref|ZP_06864330.2| multiple transferable resistance system protein MtrE [Neisseria polysaccharea ATCC 43768] gi|296838948|gb|EFH22886.1| multiple transferable resistance system protein MtrE [Neisseria polysaccharea ATCC 43768] Length = 445 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 119/438 (27%), Positives = 216/438 (49%), Gaps = 14/438 (3%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P+Y +P + + T F + + I L W + F D L KL+ IAL++N ++ A Sbjct: 3 PQYEQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLN 61 Query: 82 INAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDLFGQ-RRH 134 ++ + R +L P+ A+ + +L + G + +++DLFG+ R Sbjct: 62 SEIYRKQYMIERNNLLPTLAANANGSRQGSLDGGNVSSSYNVGLGAASYELDLFGRVRSS 121 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ +LS L+ Sbjct: 122 SEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELR 181 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 + G S ++L + EA I+S ++D +S + ++TL+ P + L Sbjct: 182 YKAGVISAVALRQQEALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQ 241 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH- 313 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L GS+ Sbjct: 242 F---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSA 298 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 F WSF P + LPIF G K+N+ A+ Q Q + ++ V +A ++V N Sbjct: 299 ELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDIAKLRQQAQIVAYEAAVQSAFQDVAN 358 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 ALT+ + K L +K+++ L + Y+ G LD+LD ER++ E A Sbjct: 359 ALTAREQLDKAYAALSKQSRAYKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSA 418 Query: 432 KRQLAKSYVDLYIAIGSG 449 + A++ DLY A+G G Sbjct: 419 QLTRAENLADLYKALGGG 436 >gi|329954864|ref|ZP_08295881.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] gi|328526968|gb|EGF53979.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] Length = 477 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 206/416 (49%), Gaps = 20/416 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 KWW++F+D L+ L+ A +N ++L A +R++ AK N R FPS Sbjct: 61 KWWKAFDDPMLDSLITTASTKNFSVLSAIDRMDMAKTNWRIERGSFFPSVSLNGGWARQQ 120 Query: 100 SYASISHRFIPNLKTNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 S ++S +P T + + L++ W++D+FG R+ +++ N ++ + +++ Sbjct: 121 SSGNVSE--VPQSITGAYSASLNASWELDIFGNIRQRVKAQRENFAASKEEYTSVMISLC 178 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI R ++ +++ + +E++ +++ G SKL + + ++ S ++ Sbjct: 179 AQIASAYIGLRELQQELNVVTHNCNTQAAVLEITRVRYKTGLVSKLDVSQAKSVYYSTKA 238 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP LE + ++ LLG + +++ N P+ P+ +GIPADL+ RPD Sbjct: 239 SIPQLESGINQYITTLAILLGTYPQDIRPTLEQ--NGKLPDYMEPVGVGIPADLLLRRPD 296 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HD--NSFPGYNTHWSFGPKLYLPI 334 IR E+++ A +G +KSD P + L GS+ + HD N + + P L + Sbjct: 297 IRQAERQVNAQAALLGASKSDWLPQVFLKGSVGYSSHDLKNLTKRNSMTFEIAPSLSWTV 356 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F K+ + R A + E + +TVL A++E +NA+ K + L+ + Sbjct: 357 FSGTKLVNATRLARAQLDESIHQFNQTVLTAVQETDNAMNGYRNSIKQIVALREVCNQGE 416 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD R+ + L+ A+ + + LY A+G GY Sbjct: 417 ETLKLSLDLYKQGLTPFQNVLDALRSLLTYQNQLTHAQGNSLQELISLYKALGGGY 472 >gi|167763086|ref|ZP_02435213.1| hypothetical protein BACSTE_01453 [Bacteroides stercoris ATCC 43183] gi|167699426|gb|EDS16005.1| hypothetical protein BACSTE_01453 [Bacteroides stercoris ATCC 43183] Length = 479 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/446 (24%), Positives = 213/446 (47%), Gaps = 30/446 (6%) Query: 32 LPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLVKIALQQNLTILQATER 81 LP + G + + D L KWW++F D L+ L+ A N ++L A +R Sbjct: 32 LPQGWGTGTAHTIPGDDNLFGSQIQPVDDKWWKAFGDPMLDSLIATASAGNFSVLSAIDR 91 Query: 82 INAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNS-TGQLDSDWKIDLF 129 ++ AK N R FPS S ++S P T + + L++ W++D+F Sbjct: 92 MDMAKANWRIERGSFFPSVSLNGGWARQQSSGNVSE--APQSITGAYSASLNASWELDIF 149 Query: 130 GQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G R+ +++ N ++ + +++ +++ +YI R ++ + + + + + Sbjct: 150 GSIRQRVKAQRENFAASKEEYTSVMISLCAQVASAYIGLRELQQELKVVIRNCNTQAAVL 209 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 E++ +++ G SKL + + ++ S ++ +P LE + ++ LLG + + Sbjct: 210 EITQVRYKTGLVSKLDVSQAKSVYYSTKASVPQLEAGINQYITTLAILLGTYPQDLRPTL 269 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 ++ N P+ P+ IGIPADL+ RPDIR E+++ A +G +KSD P + L GS Sbjct: 270 EQ--NGKLPDYMEPVGIGIPADLLLRRPDIRQAERQINAQAALLGASKSDWLPQVFLKGS 327 Query: 309 IALT-HD-NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 + + HD F N+ + P L +F+ K+ + R A + E + +TVL A Sbjct: 328 VGYSSHDLKDFTKRNSMTFEIAPSLSWTLFNGTKLVNATRLARAQLDESIHQFNQTVLTA 387 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 ++E +NA+ K + L+ ++++ LS+ Y+QG ++LD R+ + Sbjct: 388 VQETDNAMNGYRNSIKQIVALREVCNQGEETLKLSLDLYKQGLTPFQNVLDALRSLLAYQ 447 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ A+ + + LY A+G GY Sbjct: 448 NQLTQAQGNSLQELISLYKALGGGYG 473 >gi|329113930|ref|ZP_08242697.1| Outer membrane protein OprM [Acetobacter pomorum DM001] gi|326696677|gb|EGE48351.1| Outer membrane protein OprM [Acetobacter pomorum DM001] Length = 529 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 121/494 (24%), Positives = 227/494 (45%), Gaps = 58/494 (11%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKL 64 L +++L+GCTVGP Y KPH+ P + I T +WW F+D L KL Sbjct: 30 GLSVLVLSGCTVGPNYHKPHVKA-PADWRTTQPPAESQITTASADPQWWTLFHDPVLTKL 88 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------------------- 98 NL I A+ R+ ++ A FP Sbjct: 89 ENEVAASNLDIKAASLRLMQSQAERRIASAAQFPHAEANASYGRERASINGVLGLLGTME 148 Query: 99 ----SSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANL-D 143 S AS S F P S G +++ W++D +G RR +E++ A + + Sbjct: 149 REQAGSIASGSQGFGPTALPGSVGNPSFNLPQYGMNASWEVDFWGHVRRQVEAATAAMHE 208 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 + + DI ++++++ YID R + +I I + + K +++L+ L+F QGA ++L Sbjct: 209 TEEMRRDIL-VSLMAETAQDYIDLRATQTQIGILQHNIQVAKDSVKLTILRFEQGAATRL 267 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP 262 + + ++ + ++ +P L+ ++ +S L+ P + + P +P Sbjct: 268 DVAEATGQLHTFDARLPPLQAQATHMLNALSFLVAREPGA-----LDAELGAPGPIPLVP 322 Query: 263 --INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 + +G+P++L +RPDIR L + A IG+A +D +P ++L+GS+ AL Sbjct: 323 ALVPVGLPSELAEHRPDIRMAADHLHAATASIGVAIADFFPRVTLSGSLDVQALQFSGLG 382 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + + FGP LP+F+ G++ + ++ +E +Q TVL A +E+++A+ Sbjct: 383 SWASRQYGFGPTATLPLFEGGRLTGQLHLRKAQQKEAATMFQRTVLKAWQEIDDAMADFT 442 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 ++ +L AV ++ ++ + Y QG L++L ++ A + L+ A ++A Sbjct: 443 AAQRRRDELAEAVHENEIAVDTAKAQYVQGSSDFLNVLTLQNALLSSQSALADATARVAG 502 Query: 438 SYVDLYIAIGSGYN 451 S LY A+G G+ Sbjct: 503 SVTHLYRAVGGGWE 516 >gi|319787265|ref|YP_004146740.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoxanthomonas suwonensis 11-1] gi|317465777|gb|ADV27509.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoxanthomonas suwonensis 11-1] Length = 482 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/430 (25%), Positives = 209/430 (48%), Gaps = 15/430 (3%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I + ++ +L+ C VGP+Y P P + + G + + +WW F+D Sbjct: 1 MVIRTLVVAVATAVLSACAVGPDYRVPVPPDVNLHNATGEA-FAPGVAVAQWWAQFDDPV 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTG 118 L KLV +L N + A R++AA+ R D +P + A+ P+ Sbjct: 60 LEKLVSDSLLANPDLRLAMTRVSAARAVFSERRLDPWPHVGAAATGDRTRQPDAAGGGID 119 Query: 119 QL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 ++ D+ W++DLFG+ RR E++ A+L + A +D ++++ +++ +Y R ++ Sbjct: 120 EVYTLGFDAAWELDLFGRLRRGAEAARADLQAEQAGLDDVQVSIAAEVARNYFLLRGTQK 179 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI +A + L + L+ + GA S L + A +K+IE+DIP L + Sbjct: 180 RIEVAERTLRNLDQTQRLTETRRDLGAGSALDVHSSRARLKAIEADIPLLRSMEATARYR 239 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L G + + + +G +L+R+RPD+R E++LA + A++ Sbjct: 240 LAVLQGLQPGALDELLAPRPVAAYAR---ELPLGDTRELLRSRPDVRAAERRLASATARV 296 Query: 293 GIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A +DL+P +S+ G L+ + S G N W P + FD G +++ +R AE+ Sbjct: 297 GVATADLFPRISIRGFAGFLSGEFSSLVAGRNEAWQVSPSISWAAFDMGSVRARLRAAEA 356 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A + ++ VL A+++ ENAL ++ + + E +++ L+ + YR+G Sbjct: 357 GADAAAVQYEMAVLAALEDAENALQDYARRQERLRIVVDQAEAAREAERLAQVGYREGGT 416 Query: 410 SLLDILDIER 419 L +LD +R Sbjct: 417 DFLTLLDAQR 426 >gi|330820535|ref|YP_004349397.1| Outer membrane protein [Burkholderia gladioli BSR3] gi|327372530|gb|AEA63885.1| Outer membrane protein [Burkholderia gladioli BSR3] Length = 516 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 40/463 (8%) Query: 19 TVGPEYTKPHMPLLPTQFS------IGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQ 70 TVGP Y P L+ + G+ +L++ + WW ++D L+ LV++ALQ Sbjct: 29 TVGPNYRLPKQALVNAPLANAPIDGAGDGSSLVSHGAVPANWWRLYDDPVLDGLVQLALQ 88 Query: 71 QNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFIPNLKTNSTGQ--------- 119 N + R+ AA N+ RA D+ + + + + Sbjct: 89 SNTDL-----RVAAA--NLARSRAALDVANAQGGFSGGFAGGAQRAQESAEQYLLTEKLP 141 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ ++ DLFG+ +R +E++ A+ D+ A D+A++ V++ ++ +Y+++ Sbjct: 142 VVNEGAFNINVSYEFDLFGKLKRGVEAARADTDAVKAAGDLARITVVADVVRAYVESCSA 201 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E + IA Q L L ++ + LS G S+ + +++++ +DIP E R V Sbjct: 202 AEELEIAKQSLALQQQRVSLSRRLRDAGRGSQTDVTTGTTQVRTLAADIPRFEG--RRKV 259 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + P L PI +G L+R RPD+R E+KLA S A Sbjct: 260 AQYQLAALLARAPAELPPAALACQRLPRLNQPIPVGDGIALLRRRPDVREAERKLAASTA 319 Query: 291 KIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 ++G+A D+YPS+S S+ T + F WSFGP + G+ ++ +R AE Sbjct: 320 RVGVAIGDMYPSVSFGASVGTTGIFGDLFSPTTNRWSFGPLISWTFPANGQ-RARVREAE 378 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ + VLNA++E +++L + D + L+ A + + S + Y GR Sbjct: 379 AATGGALAQFDGVVLNALRETQSSLATYAADTQRADALRTAYQSARDSADETHRLYAAGR 438 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + LD R V ++ A+ Q+A V L++A+G G++ Sbjct: 439 ESFISDLDATRTLTSVHAQVAAAEGQVAADQVRLFLALGGGWD 481 >gi|311108821|ref|YP_003981674.1| outer membrane protein OprM 5 [Achromobacter xylosoxidans A8] gi|310763510|gb|ADP18959.1| outer membrane protein OprM 5 [Achromobacter xylosoxidans A8] Length = 494 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 122/465 (26%), Positives = 228/465 (49%), Gaps = 32/465 (6%) Query: 9 SLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKL 64 +L +L +GC ++ P+Y +P +P+ + G+ + + W F D +L L Sbjct: 18 ALLTLLASGCVSMAPDYNRPALPVPAAYMAPGSEATAASAAAAAEIGWRTYFPDPALQTL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQL-- 120 + AL N + +A R+ A+ RAD FP+ A S +P N TGQ Sbjct: 78 ISSALANNRDLRRALLRVEEARALYGIQRADQFPTIGVQADGSRARVPG-DLNLTGQPLV 136 Query: 121 ---------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + W++D +G+ R + +++L N ++ A A L++I+++ SY+ R Sbjct: 137 SSQYQVGLGMASWELDFWGRVRSLKDAALQNYLASDAAARAATLSLIAEVADSYLSLREL 196 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA---EIKSIESDIPTLEKSFR 227 ER+++ + + ++++ + +F +GA SKL L ++E + K++ +D LE++ Sbjct: 197 DERLALTRETIASREESLRIFRRRFEEGAISKLDLTQVETLWQQAKALGAD---LEQTRA 253 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G P L+ + ++ ++ + G+P+DL+ NRPDI E +L Sbjct: 254 AQANALELLVGAP----LNLPRLPTHLDDDSVMRELPAGLPSDLLVNRPDIVAAEHQLKA 309 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ P+++L G+ D F G + W+F P + LPIFD G+ SN+ Sbjct: 310 ANANIGAARAAFLPTITLTGAFGTASSELDGLFSGGSRAWNFAPSISLPIFDAGRRSSNL 369 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 E+ + +++T+ A K+V +AL++ + V L+ V + L+ + Y Sbjct: 370 DLTEARRDQAVAAYEQTIQTAFKDVSDALSARYWLAEQVDVLRATVAAQSERARLAQLRY 429 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++LD +R + L+ +R L S V LY A+G G Sbjct: 430 DHGASPYLEVLDAQRDLLAAQQKLAQTRRALLSSRVRLYAALGGG 474 >gi|253999404|ref|YP_003051467.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253986083|gb|ACT50940.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 471 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 119/469 (25%), Positives = 228/469 (48%), Gaps = 37/469 (7%) Query: 7 IFSLFIVLLAGCTV-GPEYTKPHMPLLPTQFS-IGNSKNLINIDTLKWWESFNDTSLNKL 64 I L +LL GC + GP+Y +P MP+ P +F+ ++ N I + WW+ +ND LN L Sbjct: 10 IAVLAAILLPGCAMMGPDYQRPEMPV-PAKFAEQADATNQAEI-SRTWWQLYNDPVLNDL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRFIPN--- 111 V AL N I A R+ A + V A LFP S + +P+ Sbjct: 68 VAKALANNTDIKLAVARVEEADAYLREVGAALFPQIDLNSSAARSRITQLGATPLPSGVD 127 Query: 112 -LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ N +L + +++D +G+ RR ES+ A + + D L++ + +Y+ R Sbjct: 128 PIRENYNIRLGTSFELDFWGKLRRAKESARAQAMATHYARDTVDLSLQGLVASNYLLLRS 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +I+++ L ++++ L+ + G +S L + + + ++ + + L + + Sbjct: 188 LESQIALSQDSLHSRQESLALTQRRLEGGVSSALDVHQAQVSTSNLTAQLADLVRQRAIV 247 Query: 230 VHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H ++ L G PA +F N P +P +G+P+ L+ +RPD+R E+ Sbjct: 248 EHQLAVLTGDLALTIPAADF---------NQLPTPPVP-PVGLPSSLLESRPDVRQAEQN 297 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + + A IG+AK+ L+P++SL G + + W+ G L LPIFD G++ Sbjct: 298 MIAANANIGVAKAALFPTISLTANYGGESAELGDILKSAARIWTGGLSLNLPIFDAGRLN 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S + +A + ++ +++ + A KEV +AL ++ + + L+ + E KK++ ++ Sbjct: 358 SRVDQATAQQKQTLASYESAIQTAFKEVNDALVNLRQQSEREAALEASKESSKKALDIAE 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G LD+LD +R + +++ + VDL+ A+G G+ Sbjct: 418 NRYKAGYSGYLDVLDSQRVYNDAALAYVQSRQARLTASVDLFKALGGGW 466 >gi|163855508|ref|YP_001629806.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163259236|emb|CAP41536.1| outer membrane efflux protein [Bordetella petrii] Length = 499 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 119/459 (25%), Positives = 230/459 (50%), Gaps = 23/459 (5%) Query: 14 LLAGC-TVGPEYTKPHMPL-----LPTQFSIGNSKNLINID-TLKWWESFNDTSLNKLVK 66 LL C +VGP+Y P +P +F + L + +WWE ++D+ LN L+ Sbjct: 31 LLCACASVGPDYMTPALPAGLSLQADNEFEASGTAGLSSSPLPARWWELYSDSRLNALIG 90 Query: 67 IALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFIPNLKTNST----GQL 120 AL+ N + A + A+ + VRA + P++ S+S L + G + Sbjct: 91 EALRANADLRVAAANLEHARAVVQEVRAAYGVQPNAQTSVSLAQSSTLGIGAADGSHGLV 150 Query: 121 DSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 D+ ++ID+ G+ RR +E++ A+ ++ A D+A++ V + + +Y DA R+ Sbjct: 151 DAGLGVSYEIDVVGRIRRSVEAATASEEAQIAAYDLAQITVAANVAGAYTDACAAGARLV 210 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q ++L ++++ L+ G + + V+ +A + + S +P+L + R ++ ++ Sbjct: 211 VARQSVELQRQSLALTAKGVRAGIYAPIDQVRSQALLAQLSSAVPSLSGARRAALYGLAV 270 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G+ T+F + + S P + + +G A LIR RPDIR E++LA + A IG+ Sbjct: 271 LTGHAPTDFDPALAQCS--IIPTITKALPVGDGAALIRRRPDIRQAERELAAATASIGVE 328 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + LYP+++L I T G ++S GP + ++ + I +A + A+ Sbjct: 329 TAALYPTITLGADIGTTFRTGGKPLSGSAFNYSLGPLISWTFPNRQVAHARIDQAGADAR 388 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + VL +++E E+ALT ++ + +L+ A + ++++++L G S L Sbjct: 389 AALAKFDGVVLASLREAESALTMYSQHMQENRQLREARDRNREALNLQKKLAIGGTISSL 448 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD+ER A E L+ + LA V +++A+G G+ Sbjct: 449 ETLDVERTLATAESALATSDTALATDRVRIFLALGGGWE 487 >gi|300693582|ref|YP_003749555.1| outer membrane chanel lipoprotein [Ralstonia solanacearum PSI07] gi|299075619|emb|CBJ34913.1| putative outer membrane chanel lipoprotein [Ralstonia solanacearum PSI07] Length = 522 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 212/469 (45%), Gaps = 45/469 (9%) Query: 21 GPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQA 78 GP+Y P + + P + + + +WWE F+DT+L +L++ A + T+ QA Sbjct: 34 GPDYRAPQLAGVEAPAGWHATLPHHGSRMMLARWWEQFHDTALTQLIEQADAGSPTLAQA 93 Query: 79 TERINAAKENILSVRADLFPSSYASIS-----------------------HRFIPNLK-- 113 R+ A+ ++ S +A LFP S S P L Sbjct: 94 VGRVREARASVSSSQAALFPQLKGSGSAVRQGGFGGSQALGGTGGTGVSSTSLSPTLGLG 153 Query: 114 --TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T D+ W++DLFG +RR +E + A L+++ A A++ + +++ +Y+ R Sbjct: 154 TFTTLAASADASWELDLFGGKRRSLEGADARLEASLADWHDARVTLSAEVANTYLQQREC 213 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++I L ++ ++L+ KF G + L + +A + + + + + Sbjct: 214 EALVAIGETTLASRQETLQLTERKFGAGFVAPADLAQAQATVADATNALESQRAQCAQGL 273 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---IPADLIRNRPDIRYQEKKLAD 287 + L G ++ + P + G +PA ++ RPD+ E+ +A Sbjct: 274 DRLVALTGLDHAALAAWLAPGKGR----IPAPPDAGAPDVPAQVLSQRPDVSSAERAVAG 329 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYN---THWSFGPKLYLPIFDKGKIKS 342 + A IG+A + PSL+L GSI + N+F G + WSFGP + LPIFD G + Sbjct: 330 ASADIGVAVASRLPSLTLAGSIGI---NAFRISGQSLTSRSWSFGPSVSLPIFDGGSGAA 386 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A + + ++ V A++EVE+AL ++ + + A + K + + Sbjct: 387 RVETARARYDQALAGYRAKVRQAVQEVEDALVRLDAAGRRLDAAAVADAQYAKVLQAASA 446 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G SLL + D+ R T L+ + + A+++V LY A+G G+ Sbjct: 447 RYRLGAGSLLQLEDVRRTTLSASQSLAAVQLERAQAWVALYKAVGGGWR 495 >gi|313201427|ref|YP_004040085.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312440743|gb|ADQ84849.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 471 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 119/469 (25%), Positives = 228/469 (48%), Gaps = 37/469 (7%) Query: 7 IFSLFIVLLAGCTV-GPEYTKPHMPLLPTQFS-IGNSKNLINIDTLKWWESFNDTSLNKL 64 I L +LL GC + GP+Y +P MP+ P +F+ ++ N I + WW+ +ND LN L Sbjct: 10 IAVLAAILLPGCAMMGPDYQRPEMPV-PAKFAEQADATNQAEI-SRTWWQLYNDPVLNDL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRFIPN--- 111 V AL N I A R+ A + V A LFP S + +P+ Sbjct: 68 VAKALANNTDIKLAVARVEEADAYLREVGAALFPQIDLNSSATRSRITQLGATPLPSGVD 127 Query: 112 -LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ N +L + +++D +G+ RR ES+ A + + D L++ + +Y+ R Sbjct: 128 PIRENYNIRLGTSFELDFWGKLRRAKESARAQAMATHYARDTVDLSLQGLVASNYLLLRS 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +I+++ L ++++ L+ + G +S L + + + ++ + + L + + Sbjct: 188 LESQIALSQDSLHSRQESLALTQRRLEGGVSSALDVHQAQVSTSNLTAQLADLVRQRAIV 247 Query: 230 VHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H ++ L G PA +F N P +P +G+P+ L+ +RPD+R E+ Sbjct: 248 EHQLAVLTGDLALTIPAADF---------NQLPTPPVP-PVGLPSSLLESRPDVRQAEQN 297 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + + A IG+AK+ L+P++SL G + + W+ G L LPIFD G++ Sbjct: 298 MIAANANIGVAKAALFPTISLTANYGGESAELGDILKSAARIWTGGLSLNLPIFDAGRLN 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S + +A + ++ +++ + A KEV +AL ++ + + L+ + E KK++ ++ Sbjct: 358 SRVDQATAQQKQTLASYESAIQTAFKEVNDALVNLRQQSEREAALEASKESSKKALDIAE 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G LD+LD +R + +++ + VDL+ A+G G+ Sbjct: 418 NRYKAGYSGYLDVLDSQRVYNDAALAYVQSRQARLTASVDLFKALGGGW 466 >gi|76804017|gb|ABA55960.1| putative outer membrane efflux protein [Vibrio sp. DAT722] Length = 556 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 127/486 (26%), Positives = 242/486 (49%), Gaps = 51/486 (10%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 L ++ L+ CT +GP+Y P LP+ +S+ + K WW+ FND +LN+LV Sbjct: 14 LSVLGLSACTTLGPDYVHPEQTALPSDWSVEKAAQDTQQSEQKLQQWWQQFNDPTLNQLV 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG-QL 120 ++A QQNL + A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 74 EMASQQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAALSF 132 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI ++ + Sbjct: 133 DAGWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILLSRR 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ LLG Sbjct: 193 NIEIQERVVNITQVQFDSGNVTELDVQQAKNQLFNTKAAQPSLEIAMKQSRTALALLLGV 252 Query: 240 PATE---------FLHYMQKQSNNFQPNLYIPINIG----------------IPADLIRN 274 E F M N F+ + P G + A L+ Sbjct: 253 LPEEMEKLLQSEGFAQRMADYENQFKSSGRKPALSGSDERSIVPRPPRLDDKVDASLVMR 312 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-------FG 327 RPD++ E + AKIG+A++ LYPS SL GSI + D++ P ++ G Sbjct: 313 RPDLQVSEMQARAQSAKIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTMVVG 370 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVT 384 P IF G++K+NIR ++ QE + + VL A+ EV NAL + + E K + Sbjct: 371 PTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNALEAYDLYLEQKSL-- 428 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V LY Sbjct: 429 RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQVVALYK 487 Query: 445 AIGSGY 450 ++G G+ Sbjct: 488 SLGGGW 493 >gi|153832194|ref|ZP_01984861.1| putative outer membrane efflux protein [Vibrio harveyi HY01] gi|148871505|gb|EDL70360.1| putative outer membrane efflux protein [Vibrio harveyi HY01] Length = 555 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 127/486 (26%), Positives = 242/486 (49%), Gaps = 51/486 (10%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 L ++ L+ CT +GP+Y P LP+ +S+ + K WW+ FND +LN+LV Sbjct: 13 LSVLGLSACTTLGPDYVHPEQTALPSDWSVEKAAQDTQQSEQKLQQWWQQFNDPTLNQLV 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG-QL 120 ++A QQNL + A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 73 EMASQQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAALSF 131 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI ++ + Sbjct: 132 DAGWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILLSRR 191 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ LLG Sbjct: 192 NIEIQERVVNITQVQFDSGNVTELDVQQAKNQLFNTKAAQPSLEIAMKQSRTALALLLGV 251 Query: 240 PATE---------FLHYMQKQSNNFQPNLYIPINIG----------------IPADLIRN 274 E F M N F+ + P G + A L+ Sbjct: 252 LPEEMEKLLQSEGFAQRMADYENQFKSSGRKPALSGSDERSIVPRPPRLDDKVDASLVMR 311 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-------FG 327 RPD++ E + AKIG+A++ LYPS SL GSI + D++ P ++ G Sbjct: 312 RPDLQVSEMQARAQSAKIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTMVVG 369 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVT 384 P IF G++K+NIR ++ QE + + VL A+ EV NAL + + E K + Sbjct: 370 PTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNALEAYDLYLEQKSL-- 427 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V LY Sbjct: 428 RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQVVALYK 486 Query: 445 AIGSGY 450 ++G G+ Sbjct: 487 SLGGGW 492 >gi|311280808|ref|YP_003943039.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] gi|308750003|gb|ADO49755.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] Length = 507 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 118/456 (25%), Positives = 228/456 (50%), Gaps = 25/456 (5%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++L CT +GP+YT P P L TQ+ + G + + +WW ND +L LV Sbjct: 17 CLVLTACTKLGPDYTPPKTPEL-TQWQPATRGVTPHAAQASYDRWWTQLNDPTLTALVNE 75 Query: 68 ALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNSTG 118 AL++N L +L++ ++ A E++L +A + + T+ Sbjct: 76 ALRKNPDVKIAGLRLLESRAQLGIA-ESLLGPQATVGSGEIVRTGQVRDHHSSTATSYGA 134 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W+ID +G+ +R +ES+ A+ + AQ D ++ + +++ Y++ R + R++I Sbjct: 135 GFNLGWEIDFWGKFQRGVESADASYFATLAQYDDIQVLMAAQVAQLYVNIRTLEARLNIT 194 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 D+ K++++++ F G +++L + + + + S S IP LE S R + + +S LL Sbjct: 195 RNNADIQKRSLQITERLFLSGNSAELDVQQAKTQYLSTLSSIPQLETSLRQSQNALSVLL 254 Query: 238 GY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P E + P + + +PADL+R RPD+R E++LA A IG+ Sbjct: 255 ARKPGPLPEM-----ASNTGVIPQGDLSLVSEVPADLLRRRPDVRTAERQLAAQSALIGV 309 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 A+S+LYPS+SL GS+ ++ + W GP + D+G++ + + ++ + Sbjct: 310 AESELYPSISLIGSVGISA-RTGSSSTLSWVAGPTFSWNLLDQGRLGNQVLVQDARFLQL 368 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++TV A +EV++A + DK +T L + +S+ ++ YR+G + Sbjct: 369 HERYRDTVFQAAREVDDAAIAYANDKDEITLLIETGQAATRSLEIANTQYREGMADFQRV 428 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +RA + L ++ + + + LY A+G G+ Sbjct: 429 LDSQRALFNQQERLVNSRGAMMRDLITLYKALGGGW 464 >gi|154251553|ref|YP_001412377.1| RND efflux system outer membrane lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154155503|gb|ABS62720.1| RND efflux system, outer membrane lipoprotein, NodT family [Parvibaculum lavamentivorans DS-1] Length = 460 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 20/449 (4%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIAL 69 ++L C++ P+Y +P P +S + + DT +WW SF D L L+++AL Sbjct: 21 LALMLGACSMVPDYARPETGT-PDAWSGPRVAGMDVAADT-QWWNSFGDPELTLLMQVAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----PNLKTNSTGQLDSDWK 125 NL I QA R+ A+ + + L P S S ++ +S L + + Sbjct: 79 ANNLDIEQALARVEQARGAARAAGSSLLPQVSGSGSASSRSVDGGSMSDSSQIGLSASYA 138 Query: 126 IDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +D++G+ R S A+L ++ D A L V S++ +Y K+RI+IA + L Sbjct: 139 LDIWGRYRAQAQS-ADLSLVASEFDGYSAALIVQSQVATTYFTILALKDRIAIAEESLAA 197 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + + ++ G+ S L L + + +IE+ +P+L N + ++ LL Sbjct: 198 ARDTLRIVEARYNAGSISGLDLAQQRNAVATIEASLPSLRAQEAANENALAILLARVPGR 257 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 F + P I G P++L+ RPDIR E +L + A IG A++ +PSL Sbjct: 258 FAVEGETLDKIALP----AIAAGQPSELLERRPDIRSAEARLLAANANIGAARAAFFPSL 313 Query: 304 SLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L+ S+ SF G T + G L PIF G ++ N++ AE E +++T Sbjct: 314 DLSASV----TRSFAGGVAETASALGASLLAPIFSGGSLEGNLQSAEGRQVELAANYKQT 369 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL + EVENAL + + + L A + +++ L+ YR G LL +LD +R+ Sbjct: 370 VLTSFAEVENALVNADANALREASLAVAADEARRAYDLAQARYRSGASDLLSVLDAQRSW 429 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + A+ S VDL++A+G G+ Sbjct: 430 LSARDSAAQARLNRYSSAVDLFVALGGGW 458 >gi|329959989|ref|ZP_08298485.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|328533123|gb|EGF59892.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 475 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 118/479 (24%), Positives = 231/479 (48%), Gaps = 34/479 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 MNI +L IV L + + + LP + G S + D L Sbjct: 1 MNIKSWSTALLIVCLCPAAIAQKTDRYLEKPLPQGWGTGLSHAIPEEDNLFSGQIPPVDD 60 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW++FND L+ L+ +A +N ++L A +R++ AK N+ R + FP+ Sbjct: 61 QWWKAFNDPMLDSLITVASTRNYSVLSAIDRMDMAKANLRIERGNFFPAVSLNGGWTRQQ 120 Query: 100 SYASISHRFIP-NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 S ++S +P ++ + L++ W++D+FG R+ +++ N ++ + +++ Sbjct: 121 SSGNVSD--LPQSISGAYSASLNASWELDVFGSIRQRVKARRENFAASKEEYTSVMISLC 178 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++L +YI+ R ++ +S+ + + ++ ++ G SKL + + ++ S ++ Sbjct: 179 AQLASAYINLRELQQELSVVANNCNTQAAVLSITETRYKTGLVSKLDVAQAKSVYYSTKA 238 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 IP LE + ++ LLG YP +++ + +++ P+ P+ +GIPADL+ RP Sbjct: 239 SIPQLEAGINQYITALAILLGTYP--QYVRPVLERAGKL-PDYMEPVGMGIPADLLLRRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYL 332 DIR +++ A +G +KSD P + L GS+ + D + G T + P + Sbjct: 296 DIRQAGRQVNAQAALLGASKSDWLPQVFLKGSVGYSSRDMKDIAKRGSMT-FEIAPSISW 354 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +F K+ S+ R A + E + +TVL A++E +NA+ S + + L+ Sbjct: 355 TLFSGTKLVSSTRLARAQLDESIHQFNQTVLTAVQETDNAMNSYRNSIQQIVALREVCNQ 414 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++ LS+ Y+QG ++LD R+ E L A+ + + LY A+G GY Sbjct: 415 GEETLKLSLDLYKQGLSPFQNVLDALRSLLSYENQLVQARGGSLLNLISLYRALGGGYG 473 >gi|90425084|ref|YP_533454.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] gi|90107098|gb|ABD89135.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 501 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 132/474 (27%), Positives = 226/474 (47%), Gaps = 42/474 (8%) Query: 15 LAGCTVGPEYTKPHM--PLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L GC VGP+Y P + PL T +G+S + + WW + D L +L++ AL Sbjct: 18 LGGCLVGPDYAGPPLAAPLAETGQGFRRLGSSARALE-PSADWWRAIRDPMLTELIERAL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP------NLKTNSTGQ-- 119 + +I R+ A+ + A+L PS + + H IP L+ + GQ Sbjct: 77 ADSPSIQIVEARVRQARASAREQYANLLPSGSVAGAYLHNRIPLGDARRGLENVAGGQAI 136 Query: 120 ----------------LDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 D+ W+ID+FG R R E ++A D+A A+ A++ + +++ Sbjct: 137 ASQIPDGTNLDLYDTNFDASWEIDIFGGRQRAAEQAVAQADAAVARFADAQVQLAAQVAQ 196 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SY+ R + R+ + Q + L ++ I+L+ + G TS L L +L ++ S E+ L Sbjct: 197 SYVGLRDAQHRLDLTLQSVKLQQEAIDLTAQRLGGGTTSDLDLERLRTQLASTEAMADPL 256 Query: 223 EKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + N ++ L+G P T Q + P+ IG PA ++R RPDIR Sbjct: 257 RATIDRNRGQLAVLVGLEPGTLDSQLRQPRPVP---VPPRPLRIGDPAGMLRRRPDIREA 313 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDK 337 E+ LA + A+IG A + +P ++L G++ + S + T S GP L + D Sbjct: 314 ERNLAATNAQIGQAVAGYFPRVTLLGNVG-SVSTSTAVFGTAGSLIGNVGPTLQWNVLDF 372 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + IR+AE+ + +Q TVL A+++ E++L+ + + V KL A K+ Sbjct: 373 GRTLARIRQAEAGSDAAIAQYQNTVLTALQDAESSLSRFSHQRSQVAKLARASASADKAA 432 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L R G S++D+LD+ER + L+ A+ QL Y+ L ++G G++ Sbjct: 433 ELMRQRNRAGTVSVIDLLDVERQRLQTVQSLAQAQAQLMNDYIALQKSLGLGWS 486 >gi|237745963|ref|ZP_04576443.1| outer membrane efflux protein [Oxalobacter formigenes HOxBLS] gi|229377314|gb|EEO27405.1| outer membrane efflux protein [Oxalobacter formigenes HOxBLS] Length = 489 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 135/471 (28%), Positives = 233/471 (49%), Gaps = 33/471 (7%) Query: 7 IFSLFIVL-LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTL--KWWESFN 57 + LF+ L GCT VGP+YT P + P FS KN+ + L +WW+ ++ Sbjct: 10 LLPLFVCTGLVGCTTVGPDYTIPENATINKPEAAEPFSAAE-KNVYRQEPLPDRWWKLYD 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--------------SYAS 103 D L L++ AL N + A + A+ + V P+ + Sbjct: 69 DPVLTSLIEKALLANTDLRVAAANLARARAVLEEVEMGTVPTVDLNAQPAFGRKSAAADG 128 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + R+ P+ ++ +G ++ ++IDLFG+ R IE++ A+ ++A A D+A++ + + Sbjct: 129 LPDRY-PDRWSHDSG-INISYQIDLFGKIARGIEAATADTEAAQAAYDLARVTIAADTAK 186 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y DA R+ IA DL K ++ + G + + + + A+ +++ + IP L Sbjct: 187 AYADACSSAYRVGIAEHSADLQAKFLDTTRQLTRAGRGTAMDVARASAQHEALRAAIPPL 246 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + ++ ++ ++ L G P T Q + P L PI +G A L+R RPDIR Sbjct: 247 QAQQKLALYRLAVLTGELPNTLVGTVGQCRQ---PPRLSQPIPVGDGAALLRRRPDIREA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNT-HWSFGPKLYLPIFDKGK 339 E++LA S A+IG+A +DLYPS+SL S +T +SF NT W GP + + + G Sbjct: 304 ERRLAASSAQIGVATADLYPSISLGLSGGMTSRFSSFGDTNTFRWGIGPLISWTLPNTGT 363 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +S I++A++ Q + + TVLNA++E E+ALTS + L+ A + + Sbjct: 364 ARSRIKQAKAENQAAFARFDATVLNALRETESALTSYARELDRNAALKAARDQSALANDQ 423 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR GR L LD ER A E + + +L + +++A+G G+ Sbjct: 424 AHRLYRHGRIDFLATLDAERTLAVDESAYAASTAKLVDDQISVFLALGGGW 474 >gi|34495888|ref|NP_900103.1| outer membrane efflux protein [Chromobacterium violaceum ATCC 12472] gi|34101743|gb|AAQ58111.1| outer membrane efflux protein [Chromobacterium violaceum ATCC 12472] Length = 466 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 121/465 (26%), Positives = 230/465 (49%), Gaps = 26/465 (5%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 RA+ + + L ++ C VGP+Y++P + L TQ G ++ WW+ F+D LN+ Sbjct: 4 RALIPVAVALAVSACAVGPDYSRPKVELPETQ--AGARAPAVDAG---WWKRFDDPVLNQ 58 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-----------FIPNL 112 L++ A++ NL + A R++ A RA L P A+ ++ P + Sbjct: 59 LIEEAVKSNLDLQAAAARVDQAAAQAGIARAALLPQLNANAGYQRGRSSTELATPGAPLV 118 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + L + W++DL+G+ RR E++ A+ ++ D A+L + +++ +Y R Sbjct: 119 SDARSANLTASWELDLWGKLRRSNEAARASYQASRYDRDAAQLALAAQVAQTYFQMRALD 178 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ IA + L +++++L +F G S+L + E E S + +P +S Sbjct: 179 AQLDIAKRTLQSREESLKLQTKRFHGGLISELDQRQAEVEAASARAAVPQFARSLEQTET 238 Query: 232 NISTLLGYPATEFLH---YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LLG+ + + K N+ +P ++ P+ L+ RPD+ E++L + Sbjct: 239 ALGVLLGHSPKQLVDGGLARGKDINSLASPPEVPADL--PSSLLERRPDVAASEQQLIAA 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+AK+ +PS+SL+G++ L+ D+ F G WSF L PIF+ G N+ Sbjct: 297 NARIGVAKAAYFPSISLSGALGSQSLSLDSLFTGPTRAWSFAGNLAAPIFNFGATGYNVD 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + ++ +Q+TV +A K+ +AL + + I+ +++ L+ + Y Sbjct: 357 AATAGQKQALAQYQKTVQSAFKDALDALAANGAARDILQAQTTQSTALNRTLKLAGLRYD 416 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S LD+LD +R + + E++L AK + + +Y A+G G+ Sbjct: 417 NGYASYLDVLDAQRNSFQAELNLVNAKLDKLNTTIGVYKALGGGW 461 >gi|325298454|ref|YP_004258371.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] gi|324318007|gb|ADY35898.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] Length = 461 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 227/459 (49%), Gaps = 26/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 ++S+ ++ AGC +G YT+P + L T S+ S + ++I W + DT+L L++ Sbjct: 12 LWSILVISTAGCQIGKHYTRPELNLPETLDSL--SVDSVSIGDYAWETLYTDTTLQALIR 69 Query: 67 IALQQNLTILQATERIN--AAKENI----------LSVRADLFPSSYASISHRFIPNLKT 114 L N ++ A R+ AA++ I L V A+ ++Y S+ Sbjct: 70 KTLTYNKDMMIAAARVREMAARKRIDIGNMLPQIGLRVYAERERTNYGGDSYSQDDEFDL 129 Query: 115 NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 T W+IDL+G+ R + S+A+ + K+++I+++ +Y + Sbjct: 130 KGT----MSWEIDLWGKLRWARDKSVADFLGSVENQRAMKMSLIAEVAQTYFELVALDNE 185 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++I Q ++ ++++ L+ +++ G TS+ + + + E+ + +P LE+ + ++I Sbjct: 186 LAIVRQTVEARRESLHLARIRYEGGLTSETAFRQAQVELARTATLVPDLERQITLKENDI 245 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP H++++ L + + +G+P+ L+ RPD+R E+ L + A++ Sbjct: 246 AFLTGDYP-----HHIKRTVLPEDVLLPVSLPVGLPSSLLERRPDVRQAEQALIAANAEV 300 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSA 351 GIA + L+PSL+LN S D + W L P+F GK ++ ++ +++ Sbjct: 301 GIAFTSLFPSLTLNASYGGESDVLDELLKSPWHLLSANLLQPVFSWGKNRARLKAQKAAL 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +++ VLNA +E NA+ N+ K+I + K ++ L+ + Y G Sbjct: 361 EGATHEYEKVVLNAFREAYNAIADFNKTKEIYETRLRLEQASKSTLDLAQLQYLNGVIGY 420 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD +R ++ LS A R + V+LY A+G G+ Sbjct: 421 MDLLDAQRGYLDAQISLSNAVRDKQITMVNLYKALGGGW 459 >gi|207724325|ref|YP_002254722.1| drug efflux lipoprotein [Ralstonia solanacearum MolK2] gi|206589541|emb|CAQ36502.1| drug efflux lipoprotein [Ralstonia solanacearum MolK2] Length = 486 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 119/473 (25%), Positives = 230/473 (48%), Gaps = 33/473 (6%) Query: 9 SLFIVLLA-GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNK 63 +LF+ +A GC VGP+Y KP +P+ P +F ++ D WW F+D L + Sbjct: 9 ALFVASVATGCAVGPDYVKPDVPV-PERFLGQAAVEQRATNAEADLSAWWAGFSDPQLTR 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKT 114 V +AL+QNL + QA R+ A+ + + A L PS +Y S+ L + Sbjct: 68 FVHLALEQNLDLAQAFARVTQARAGLGAANAALLPSGNVTGQAARAYQSVETPLGRVLSS 127 Query: 115 NST---------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +++ W++D+FG RR E++LA+ ++ A +L V ++ Y Sbjct: 128 RPGFDRYGNAFEADVNASWELDVFGGLRRGREAALADYQASKAGAVATRLAVAAQTADIY 187 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I R + R+ +A + ++ + +L + +G ++L + + E + + + IP LE Sbjct: 188 IAVRGLQTRLKVARHQVQTQEELLSTVNLLYGKGLAAELQVRQAEGALAQVRASIPQLEV 247 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + +LG P T + P + I G P +L+R RPD+ E+ Sbjct: 248 GLDAAMNALDVMLGSLPGTHRTELAEGGDIPAAPQIAIS---GSPGELLRRRPDLIVAER 304 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +LA S A+IG+A ++ YP SL+G + ++ + F G + ++ L +FD G+ Sbjct: 305 RLAASNARIGVAIAEYYPKFSLSGLLGSATSVGAGSLFGGGASQFAGVLGLRWRLFDFGR 364 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I + I +A+ E ++ VL A ++VE+A +++ + ++ L V+ ++ + Sbjct: 365 INAQIDQAKGQEAEMLAAYRLAVLRATEDVEDAFSALVKREEQTAMLTQGVDSLGRARNA 424 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y++G SL+++L + + + + A+ + A++ V + A+G G+ P Sbjct: 425 SFAAYQKGVVSLIEVLQADESLLRASDARAQAQTESARAAVAAFKALGGGWQP 477 >gi|187251320|ref|YP_001875802.1| outer membrane protein [Elusimicrobium minutum Pei191] gi|186971480|gb|ACC98465.1| Outer membrane protein [Elusimicrobium minutum Pei191] Length = 487 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 232/462 (50%), Gaps = 27/462 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ IF L +L AGC + P L P Q+ I ++ D KWWE F D +LN Sbjct: 6 VLKKIFILLFLLAAGCNFAAKNKLPETDL-PNQYKI---EDYSVFDNEKWWEIFEDPTLN 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISHRFIPNLKTNS 116 L + AL+ N ++ A ER+N A+ + A+ P S +R ++TN+ Sbjct: 62 MLEETALEYNKNLVIAFERVNMARAEAGIISANSMPQIGFNVGGMRSGGYR----VRTNN 117 Query: 117 --TGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + + + ++IDL+G++R++++++ A L S AQ D+ +L + + + +Y + Sbjct: 118 RFSAGVGASYEIDLWGRQRNLQAAMKARLLSREAQKDVVRLTITADVAKTYFTILAYDSI 177 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++ + NI L KF + A+++LSL +LEAE ++++ + N + Sbjct: 178 LAKIDAAIKDKDDNIALHKSKFLKNASTELSLRRLEAEKDNMKAIYLEYRIALSANETAL 237 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKI 292 STL+G A E + + + + + +P+ ++ NRPDIR E L ++ A I Sbjct: 238 STLIGGSAREIIEESIPRERPLEKMAVVEKMLSQVPSSILHNRPDIRVAEMDLYEAGANI 297 Query: 293 GIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+ ++ +PS+SL + L ++ F G W+F + PIF G+ + + E Sbjct: 298 GVIRAGFFPSISLTTATVLVSESMKRLFSG--GTWNFAGIITGPIFQGGR--NRFKLEEL 353 Query: 350 SAQEQYI--TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 AQ++ + T++ TV A KE +A+TS N + +I+ + V +S++L+ +Y Sbjct: 354 QAQQRILVSTYELTVQKAFKETYDAITSNNINHEILATREREVVTLNRSVTLARKSYLSK 413 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +L D+L+I+R ++DLS+ R VD+ +G G Sbjct: 414 KITLTDLLEIQRRALDADIDLSLTLRNQLYFIVDICKTLGGG 455 >gi|326319139|ref|YP_004236811.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375975|gb|ADX48244.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 500 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 129/486 (26%), Positives = 233/486 (47%), Gaps = 53/486 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF------SIGN-SKNLINIDTLKWWESFND 58 A+ + L+AGCTVGP Y P + + P + + G + + D WW F+D Sbjct: 16 ALLLVLTGLVAGCTVGPAYRSPAVDV-PHAYRGHKVLAAGTPAAPAVRTDLAAWWTRFDD 74 Query: 59 TSLNKLVKIALQQNLTILQATERIN-------------------AAK--------ENILS 91 L + V+ ALQQNL + QA R+ AA+ E L Sbjct: 75 PRLGRFVEAALQQNLDLAQAFARVQQARAGLAAANAALAPSAGVAAQGARNYSSLETPLG 134 Query: 92 VRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVD 150 D P +A R+ + N+T + W++DLFG RR E+++A+ ++ A Sbjct: 135 RVLDTMPG-FA----RYGSAYEANAT----ASWELDLFGGLRRTREAAVADYQASDAAAA 185 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +L V +++ +YI R + R+ +A + + ++ E L++ +G +L L + E Sbjct: 186 AVRLAVAAQVADTYIQIRGLQARLGVAREQVRTQQQLRETVALRWKKGLAPELQLRQAEG 245 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + ++ +P LE++ ++ + +LG P T H + P L + G PA Sbjct: 246 ALHRAQATVPPLEQALEAAMNALDVMLGTAPGT---HRAELADPRPVPGLPVLALNGTPA 302 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWS 325 DL++ RPD+ E++LA S A+IG A ++ YP +SL G I ++ N F G Sbjct: 303 DLLKERPDLIAAERRLAASNARIGAAMAEYYPKISLTGLIGSATSVSSGNLFSGGAAQAG 362 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G L +FD G+I + I +A + E +++ VL A ++VENAL +++ + +++ Sbjct: 363 AGAGLRWRLFDFGRIDAQIDQARAQEAETLAAYRQAVLRATEDVENALIALDRKQALLSV 422 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L + ++ S Y +G SL+++L + + V+ ++A+ + A++ V L+ A Sbjct: 423 LDQGADSLARARRSSGAAYDRGVVSLIEVLQADESLLGVQDAQAVARTESARAVVALFKA 482 Query: 446 IGSGYN 451 +G G+ Sbjct: 483 LGGGWT 488 >gi|134290900|ref|YP_001114669.1| Fis family transcriptional regulator [Burkholderia vietnamiensis G4] gi|134134089|gb|ABO58414.1| transcriptional regulator, Fis family [Burkholderia vietnamiensis G4] Length = 503 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 228/465 (49%), Gaps = 45/465 (9%) Query: 18 C-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+YT P PL + L++ D + WW+ ++D LN LV+ AL Sbjct: 22 CKSVGPDYTLPQHAYVNAPLANHALDDADGA-LVSRDAVPGNWWQLYDDPVLNALVQSAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALEVANEQGGFSGHAEAGVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ +++DLFG+ RR +E++ A+ D+ A D+A++ V++ ++ +Y+++ Sbjct: 134 PVVNEGAVG-INVSYELDLFGKLRRGVEAAHADSDAVQAAADLARITVVADVVRAYVESC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E ++ Sbjct: 193 SAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEGRRKI 252 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LL + + + P L PI IG A L+R RPD+R E++LA + Sbjct: 253 AQYQLAALLARAPADLPKAVAECER--LPQLRQPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ + Sbjct: 311 TARIGVATAALYPSVSIGLSAGSVGVAAD-LFSSTTNRWSFGPLISWAFPINGQ-RARVH 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARSSADETHRLYT 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 429 AGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVRLFLALGGGW 473 >gi|296117237|ref|ZP_06835829.1| putative outer membrane protein [Gluconacetobacter hansenii ATCC 23769] gi|295976190|gb|EFG82976.1| putative outer membrane protein [Gluconacetobacter hansenii ATCC 23769] Length = 593 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 124/495 (25%), Positives = 237/495 (47%), Gaps = 67/495 (13%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----------------INIDTLKWWESF 56 V+ AGC VGP + KP P P ++ G N+ ++ WW+ F Sbjct: 51 VVTAGCAVGPNFHKP-TPWTPKKY--GGPTNMHTETKAGEKPVASQVTSDMPDPAWWDCF 107 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------- 106 +D L+ L + NL + + R+ ++ + A+ FP+ AS S+ Sbjct: 108 HDPILSDLERRVATDNLDVRRFAYRMAESRAELRIAGAERFPAMSASGSYARQQYSTKML 167 Query: 107 -RFIPNLKTN---------STGQ------------LDSDWKIDLFGQ-RRHIESSLANLD 143 R + +++ S GQ +D+ W++DL+G+ RR E++ A Sbjct: 168 QRIVTDIEQEHPELQGLAPSPGQAKIPLFNQWRDSIDATWEVDLWGRVRRQYEAAAA--- 224 Query: 144 SAYAQVDIAKLNVISK---LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 SA + + +IS+ + Y+D R +E++ I + D+ ++ ++L+ ++ G + Sbjct: 225 SAQVTQEARRGMLISRQAEVARDYMDLRATQEQLRIVMENRDVAQRMLDLNQQRYAHGMS 284 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S L++ + A++++ + +P LE+ V+ +S L+G P + S + Sbjct: 285 SDLNVERARAQLEATVARMPQLEQQLASQVNALSMLMGEPPRALSDRLLVASAIP--PVP 342 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNS 316 + IG+P++L R RPDIR E L + A++G A ++ YP +++N D Sbjct: 343 PAVPIGVPSELARRRPDIRRAEANLHAATAQVGEAVAEFYPRVTINAGFGFESLSFRDMG 402 Query: 317 FPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F +N W+ GP + LP+F G+++ + +S +E + +Q+TVL A +V+NALT+ Sbjct: 403 F--WNAKAWNVGPSITLPLFQGGRLRGQLELRKSEQKEAALAYQQTVLQAWHDVDNALTA 460 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 ++++ L VE + S+ L+ Y QG + L +LD +R + +L+ + + Sbjct: 461 YTDEQRHHDFLAAQVEATRASLRLAQDQYAQGLVTYLSVLDAQRQLLSSQSELTTSTAAI 520 Query: 436 AKSYVDLYIAIGSGY 450 + + V LY A+G G+ Sbjct: 521 SANLVRLYNALGGGW 535 >gi|294506371|ref|YP_003570429.1| efflux pump outer membrane protein [Salinibacter ruber M8] gi|294342699|emb|CBH23477.1| efflux pump outer membrane protein [Salinibacter ruber M8] Length = 496 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 115/483 (23%), Positives = 222/483 (45%), Gaps = 36/483 (7%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLI--------NIDTLKW 52 +L A F L ++ +AGC++ PE + P LP +F + D +W Sbjct: 5 RLLIASFLLGMLTVAGCSMTPEMSTPEAEQDLPDRFEAAPGDTTLPAAAADTAAYDATRW 64 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF---- 108 W ++ D SL LV AL NL + +A R+ RA LFPS A+ + Sbjct: 65 WAAYEDPSLTALVDTALAANLNLEEAQGRVEELAAQFRIARAPLFPSVTANGQGNYQNQP 124 Query: 109 -------------IPNL--KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 P+ T+ L +++D +G+ R ++L+ + A + A Sbjct: 125 ANTGIGGAIGGGQGPDRFEFTDYQATLGLSYELDFWGRVRSQRTAALSQYFATAADLQTA 184 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L+VIS+ I +Y + ++ + + + L ++ + ++ ++ +G L + + Sbjct: 185 RLSVISQTISTYAQIASLRRQVRLGERTVGLLEERVAVTEDRYARGLVPSFQLYTVRQSL 244 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ ++D P LE+ +TLLG A E + P P+ G+PADL+ Sbjct: 245 QAAQADQPDLERRLYEAQSRFATLLGRFAGEQRALLPDSMTV--PLAPEPVPAGLPADLL 302 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGP 328 RPD+R +L + +IG+A++++ PSLSL G D PG SF Sbjct: 303 MQRPDVRGAALRLEAARQEIGVARAEMLPSLSLTGQGGTQSSELADLVDPG-QVFASFAG 361 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L P+F G++++N+ AE+ ++Q +++TVL A +EV+ +L + + ++ +++ Sbjct: 362 QLTAPLFQGGQLRANLNAAEARYKQQAARYEQTVLTAFQEVKASLVAYEKQRQRYREVER 421 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V+ + + Y +G +L ++D ER + L+ +R + + + L+ A+G Sbjct: 422 QVDTARDAFQAQRDRYERGVGDVLSLIDAERTLLQARTRLAGVRRAVTNARLALHRALGG 481 Query: 449 GYN 451 + Sbjct: 482 PWT 484 >gi|170695525|ref|ZP_02886669.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170139512|gb|EDT07696.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 477 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 119/471 (25%), Positives = 222/471 (47%), Gaps = 44/471 (9%) Query: 15 LAGCTVGPEYTKPHMP--------LLPTQFS-------IGNSKNLINIDTLKWWESFNDT 59 L GC VGP++ P P LP Q + + N WW F Sbjct: 12 LTGCAVGPDFHAPAAPDTQNYTQRALPGQTASSEGPAGAAQTFNAAPGPIPMWWRQFQSD 71 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVR-ADLFPSSYASISHR---------FI 109 +LN+LV AL+ N T+ QA R+ A+EN ++ A FPS A++S I Sbjct: 72 ALNRLVDEALRHNPTLGQARARLIEARENYTALAGATQFPSIDATLSGSRQKVDPAAFGI 131 Query: 110 PNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P++++ + + + D+FG RR +E+S+A +D ++D A+L++ ++ + Sbjct: 132 PHVESPGPFSLFSASVSVSYVFDIFGGNRRALEASMAQVDYESYELDAARLSLAGNIVAT 191 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + +++I++ ++ D + + +F G S+L + + + + +P L Sbjct: 192 AVRRASLQQQIALTQRLADAQAHQLSIVEARFAAGGVSQLDVHRQRTLLAQTRASLPPLA 251 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRY 280 H ++ LLG P+ + + L++P++I +P+ L R RPDI+ Sbjct: 252 SQLAAADHQLAILLGRVPSQADFDELTFDA------LHLPLDIPLALPSTLARARPDIKA 305 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E L ++ A +G+A ++LYP SL+ I + G N W+ G L PIF Sbjct: 306 AEALLHEASANVGVATANLYPQFSLSAGIGSERTRIGDIVNGLNV-WNIGLNLTQPIFRG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++ + R AE++ + +++TVL A+++V ++LT++ D + + A + + S+ Sbjct: 365 GELHAKKRAAEAAYDAAFENYRQTVLQALQQVADSLTAVQNDARELQARTEAAQQAQASL 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ Y G S L +LD ER + + +D + A+ L+ A+GS Sbjct: 425 DVATRQYAAGGISQLALLDAERDSLQTAIDRTQAQANRFSDTAALFQALGS 475 >gi|323529361|ref|YP_004231513.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323386363|gb|ADX58453.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 511 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 121/464 (26%), Positives = 219/464 (47%), Gaps = 41/464 (8%) Query: 17 GC-TVGPEYTKP-----HMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC VGP Y+ P + PL P + + N+ + WW+ ++D LN LV A Sbjct: 31 GCMNVGPNYSLPKDALVNAPLANAPIEGADAALTTRANVPAV-WWKLYDDPVLNSLVDEA 89 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------IPNLKTN 115 LQ N + A + ++E + +A S AS + + +P + Sbjct: 90 LQSNTDLRVAAANLARSREALGVAQAQGGFSGKASAAFQRAQESGEQYLLTEKLPVVNEG 149 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G + ++IDLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++ E + Sbjct: 150 DVG-ISVAYEIDLFGKLRRGVEAAQADAEAVQAAGDLARIAVVADVVRAYVEQCSAAEEL 208 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA Q L L K+ +E+S G ++ + + + ++ ++ +DIP ++ + ++ Sbjct: 209 KIAQQSLALQKQRVEVSRRLRDAGRGNQTEVTRGQTQVDTLSADIPRYTARRKIAQYRLA 268 Query: 235 TLLGY------PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LL PA + P + PI +G A L++ RPD+R E++LA S Sbjct: 269 ALLARAPSDLPPAALACEKL--------PQIRQPIPVGDGAALLKRRPDVREAERQLAAS 320 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A LYP++S+ S LT ++ W FGP + F + +R Sbjct: 321 TARIGVATGALYPTVSIGASAGLTGVLEDLGTSPTARWGFGPLISW-TFPANGARGRVRE 379 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A +S+Q + VL A++E E L + D L+ A++ +S + YR Sbjct: 380 AAASSQVALARFDGVVLTALRETETNLATYASDYARAEALRAALKSAAQSADETHRLYRA 439 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R + ++ A+ Q+A V+L++A+G G+ Sbjct: 440 GRESFISDLDATRTLTSTKSQVAAAEGQVAIDQVNLFLALGGGW 483 >gi|17547927|ref|NP_521329.1| drug efflux lipoprotein [Ralstonia solanacearum GMI1000] gi|17430233|emb|CAD16996.1| putative drug efflux lipoprotein [Ralstonia solanacearum GMI1000] Length = 486 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 232/476 (48%), Gaps = 31/476 (6%) Query: 5 RAIFSLFIVLLA-GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R++ +LF+ LA GC VGP+Y KP +P+ L Q ++ D WW F D Sbjct: 5 RSLAALFVASLATGCAVGPDYVKPDVPVPQRLQGQTAVEQRTANAAADLSAWWAGFGDPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLKT----- 114 L + V ++L+QNL + QA R+ A+ + + A L PS + R +++T Sbjct: 65 LTRFVLLSLEQNLDLAQAFARVTQARAGLGAANAALLPSGNVTGQAARAYQSVETPLGRV 124 Query: 115 -NSTGQLD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 NS D + W++D+FG RR E++LA+ ++ A +L V ++ Sbjct: 125 LNSRPGFDRYGNAFEADVNASWELDVFGGLRRGREAALADYQASQAGAVATRLVVAAQTA 184 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 YI R + R+ +A + ++ + +L + +G ++L + + E + + + IP Sbjct: 185 DIYITIRGLQTRLKVARHQVQTQEELLSTVNLLYGKGLAAELQVRQAEGALAQVRASIPQ 244 Query: 222 LEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE ++ + +LG P T + P + I IG P +L+R RPD+ Sbjct: 245 LEAGLDAAMNALDVMLGSLPGTHRAKLAEGGDIPAAPQVAI---IGSPGELLRRRPDLIV 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E++LA S A+IG+A ++ YP SL+G + ++ + F + ++ L +FD Sbjct: 302 AERRLAASNARIGVAIAEYYPKFSLSGLLGSATSVGAGSLFGSGASQFAGVLGLRWRLFD 361 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+I + I +A+ E ++ VL A ++VE+A +++ + ++ L V+ ++ Sbjct: 362 FGRINAQIDQAKGQEAEMLAAYRLAVLRATEDVEDAFSALVKREEQAAVLTQGVDSLGRA 421 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + S Y++G SL+++L + + + + A+ + A++ V + A+G G+ P Sbjct: 422 RNASFAAYQKGVVSLIEVLQADESLLRASDARAQAQTESARAAVAAFKALGGGWQP 477 >gi|269960290|ref|ZP_06174664.1| hypothetical protein VME_10480 [Vibrio harveyi 1DA3] gi|269834901|gb|EEZ88986.1| hypothetical protein VME_10480 [Vibrio harveyi 1DA3] Length = 561 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 126/486 (25%), Positives = 243/486 (50%), Gaps = 51/486 (10%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 L ++ L+ CT +GP+Y P LP+ +S+ + K WW+ FND +LN+LV Sbjct: 14 LSVLGLSACTTLGPDYVHPEQTALPSDWSVEKAAQDTQQSEQKLQQWWQQFNDPTLNQLV 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG-QL 120 ++A QQNL + A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 74 EMASQQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAALSF 132 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++D++G+ R IES+ A ++ A + + S++ +YI+ R F+ERI ++ + Sbjct: 133 DAGWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITSEVARNYINYRTFQERILLSRR 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ LLG Sbjct: 193 NIEIQERVVNITQVQFDSGNVTELDVQQAKNQLFNTKAAQPSLEIAMKQSRTALALLLGV 252 Query: 240 ---------PATEFLHYMQKQSNNFQPNLYIPINIG----------------IPADLIRN 274 + F M N F+ + P G + A+L+ Sbjct: 253 LPEDVEKLLQSDGFAQRMADYENQFKSSGRKPALSGNDERSIVPRPPLLDDKVDANLVMR 312 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-------G 327 RPD++ E + A+IG+A++ LYPS +L GSI + D++ P ++ G Sbjct: 313 RPDLQVSEMQARAQSAQIGVAETALYPSFTLFGSIGI--DSTVPDGSSFSFSDSLTMVAG 370 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVT 384 P IF G++K+NIR ++ QE + + VL A+ EV NAL + + E K + Sbjct: 371 PSFSWNIFQYGRVKNNIRFEDARFQETITNYNKKVLQAVNEVTNALEAYDLYLEQKSL-- 428 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V LY Sbjct: 429 RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQVVALYK 487 Query: 445 AIGSGY 450 A+G G+ Sbjct: 488 ALGGGW 493 >gi|170734657|ref|YP_001773771.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169820695|gb|ACA95276.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 560 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 132/535 (24%), Positives = 235/535 (43%), Gaps = 95/535 (17%) Query: 5 RAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQF-------------------------- 36 R I ++ +LAGCTVGP++ KP P + Sbjct: 16 RGIAAMLAACAVLAGCTVGPDF-KPPQADAPANWHDLQAADAASPASGASAASAASAASA 74 Query: 37 --SIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 + S + + D +WW +F D L++LV+ A NL + A RI A+ + + Sbjct: 75 PGAHAPSSPVTSADPDPRWWRAFGDPLLDQLVERAAHDNLDVQAAVLRIAQARAQVRAAA 134 Query: 94 ADLFPSSYASISH-------------------------------RFIPN----LKTNSTG 118 A P A+ S+ RF P ++ + G Sbjct: 135 AQGLPDVRATASYQREQLGLKGIVEEQGIDQRVDRLGAPGSPLDRFGPGTGASVQQGARG 194 Query: 119 QLDS--------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 LD+ W++DLFG+ RR +E++ A +A A D A L++ +++ + Sbjct: 195 ALDALEAPVNLWQAGFDASWELDLFGRVRRSVEAAGAQASAAIASRDDALLSLEAEVAQT 254 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R + + ++A + ++ ++L+ + G S L + EA + I + +P + Sbjct: 255 YLQLRGAQAQRALADDLQRAQRELLDLTREQAAHGLASDLDVRSAEARLAQIRAQLPQFD 314 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + ++ L+G ++ + P++ + +G+P+ L R RPDIR E Sbjct: 315 QQIVLLRNGLAYLVGGAPGALDDWLD--APRALPDVPPTVPVGLPSTLARRRPDIRRAEA 372 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFD 336 +L + A IG+A + YP +SL G + L +H HWS FGP + LPIF Sbjct: 373 ELHAATADIGVAVAQFYPDISLTGQVGLRASHVREL----AHWSHLFYSFGPAVSLPIFS 428 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ SN+R +++ E + +++ VL A+++V+NAL D+ L AV+ + + Sbjct: 429 GGQLVSNLRLSQARQAEAALAYRQAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGA 488 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR+G LD+LD ER ++ Q V LY A+G G+ Sbjct: 489 LDLARDRYRKGLSPFLDVLDAERQWSEGRQQAEQGALQKTTDLVALYKALGGGWE 543 >gi|78049962|ref|YP_366137.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038392|emb|CAJ26137.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 486 Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 226/474 (47%), Gaps = 39/474 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKWWESFNDT 59 + +L +L A TVGP Y P P F GN++ +WW + D Sbjct: 11 VAALLSMLSACSTVGPNYAVPAESAYQRPAANAAFLDTGNAQVQPGAALPARWWALYQDP 70 Query: 60 SLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASI 104 L+ L++ AL+ N+ + A R A E + RA + S+ A + Sbjct: 71 MLDGLIEQALRDNVELKVAGANLRRAAAVYEQAMDAGGFDYDVEAGVSRAQV--SAEAFL 128 Query: 105 SHRFIP--NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 +P NL + G+ ++ DLFG+ +R E++ A+ A A +D+A+++V +++ Sbjct: 129 QEEKLPVFNL---ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARVSVAAQVA 185 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY++ H + +A L L + + +++ G + L + A++ +E+ +P Sbjct: 186 GSYVEICHANHELQVAEHSLQLQQHSRQITQRLIAAGRGTPPDLARATAQVAMLEAALPP 245 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L + + ++ LLG E + S P + PI IG L+ RPD+R Sbjct: 246 LRARRQAAGYQLAALLGKTPGELPPGVD--SCAHAPAVQQPIPIGDGRALLARRPDVRQA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDK 337 E++LA + A+IG+A ++LYP + L GSI T D P TH WS GP + + Sbjct: 304 ERRLAAATARIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSLGPLISWTLPSS 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++ +R E+ A + TVL A++EV+ +L+ +D + L+ A + + + Sbjct: 362 GA-RARVRATEAGADAALAQFDNTVLQALREVQTSLSRYAQDLDRLHLLEQAQQQAELAS 420 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y+ GR L LD ER A E+ L+ A+ Q+++ + L++A+G G++ Sbjct: 421 AQNRRLYQGGRTPYLSSLDAERTLASAEMTLANAQAQVSQDQIQLFLALGGGWD 474 >gi|330876552|gb|EGH10701.1| outer membrane efflux protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 477 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 124/471 (26%), Positives = 220/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFSAVLSACQMVGPNYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + ++ +A +S A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRSRYQTSEAQAAGGFTSGAKIGAQRVQESGEAY 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L++ ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTEKVPVSNVGDVG-LNTAYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + L L ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELGIARESLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + S N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGVS--SCNELPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L + G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTVPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + +++ Sbjct: 360 -RARIHQAEASAQASLARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAREAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A ++A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTEVAMGQINLFLALGGGW 469 >gi|258406459|ref|YP_003199201.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfohalobium retbaense DSM 5692] gi|257798686|gb|ACV69623.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfohalobium retbaense DSM 5692] Length = 502 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 117/462 (25%), Positives = 223/462 (48%), Gaps = 29/462 (6%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINI---DTL--KWWESFNDTSLNKLVK 66 LL GC VGP+Y + P ++ K L DT WW++F+D LN++ + Sbjct: 25 ALLCGCAAVGPDYKGASLEA-PQGWNAEMEKGLQATRPQDTTLSTWWKTFDDPVLNQVAQ 83 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI------PNLKTNS-- 116 A+ NL + A R+ A+ A +P S + I PN Sbjct: 84 KAVSGNLDLKSAVSRLRQARLKRGISSAGRYPTLSGNGQFQRQHIRENAGPPNGGDEVDY 143 Query: 117 -TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 Q D+ W++D+FG RR +E++ A L++ A V+ ++++++ +YI+ R ++ R+ Sbjct: 144 YNAQFDAGWELDIFGGIRRSVEAAQAELEANRADVNDVLTSLLAEVALNYIEVRTYQHRL 203 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 SI + +K EL+ ++ G ++L++ + ++ + + LE + + ++ Sbjct: 204 SITKANIATQEKTYELNSSRYEAGLINELAVQQALRNLERTRAQVARLENGLQAAKNRLA 263 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 LLG + +P +P + +GIPA+ +R RPDI+ E++LA A+I Sbjct: 264 VLLGQSPGSLSALL----TPVRPMPEVPAQVAVGIPAEAMRRRPDIQRAERELAAQTARI 319 Query: 293 GIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A + LYP L G+I L + + + W+ GP + IF +++ NI Sbjct: 320 GVATAQLYPQFHLLGTIGLEALLSGSDFLTSQSMFWNIGPGVSWNIFRGRELRLNIDLQT 379 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + ++ T+L A E+E ALT+ +++ LQ AV+ K++ +++ Y G Sbjct: 380 EQQHQALLAYKATILQAQSEIETALTAYAKEQIRHNSLQKAVQAAKRAEAVARDQYAAGL 439 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD +R+ ++ +L ++ +A + LY A+G G+ Sbjct: 440 VDFYNVLDAQRSLLSLQDELLQSQGAVASNLARLYKALGGGW 481 >gi|325919457|ref|ZP_08181482.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325550077|gb|EGD20906.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 486 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 126/463 (27%), Positives = 223/463 (48%), Gaps = 32/463 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGPEYT+P PL P ++ + + D WW F+D L++ V AL QN Sbjct: 18 GCAVGPEYTRPSAPL-PDRYLGQAAAEQRQAATQADLSTWWTGFDDPDLSRYVTQALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA+ R+ A+ + + A L PS S + R +L+T NST D Sbjct: 77 LDLAQASARVTQARAGLTAATAALLPSGNISGNATRAYQSLETPLGQVLNSTPNFDRYAS 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++DLFG RR +++LA+ ++ A +L V ++ YI R + R Sbjct: 137 TYEANLGASWELDLFGGLRRGRQAALADYQASEAGAAATRLAVAAQTADIYISIRGLQAR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + + + L +G +L L + + + ++ +P +E ++ + Sbjct: 197 LEVAQRQVATQQGLLSMVTLLHGKGLAPELQLHQAQGALAQAQASVPGIESGLVAAMNAL 256 Query: 234 STLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P DL+R RPD+ E++LA S A+I Sbjct: 257 DVMLGVAPGTHRAELATSKPIPLAPRI---AETGTPGDLLRRRPDLIVAERRLAASNARI 313 Query: 293 GIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL+G + A++ N F + + L +FD G+I + I +A+ Sbjct: 314 GVAMAEYYPKFSLSGLLGSATAISGANLFTSDASQSAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 EQ ++ +VL A ++VENALT++ + ++ L V+ K+ S + Y +G Sbjct: 374 GQEAEQLAAYRLSVLRATEDVENALTALVKREQQAAVLSQGVDALGKARGASALAYEKGV 433 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL+++L+ + + + A+ A+S V + A+G G+ Sbjct: 434 VSLIEVLNADDSLLRASDAQVQARTDAARSAVATFKALGGGWQ 476 >gi|313201698|ref|YP_004040356.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312441014|gb|ADQ85120.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 482 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 123/458 (26%), Positives = 219/458 (47%), Gaps = 22/458 (4%) Query: 9 SLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +L LLAGC VGP+Y KP + P + + + T WW FND L ++ Sbjct: 12 ALMASLLAGCQGWPMVGPDYQKPKT-VTPDTWQVQTP--VPAAQTADWWRQFNDDVLLEI 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI-----PNLKTNST 117 + A + + ++ A + I +A+ N+++ RA F S+ SIS + P L T Sbjct: 69 ITAAERNSASVADAYKNIASARANLVAARAMGFDGLSATPSISRKAFSFGGDPTLLTQQQ 128 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W+IDLFG RR ESSLA+ D+ + A+L+V ++ +Y D R ++++ + Sbjct: 129 ISFDTSWEIDLFGGLRRERESSLADYDAKRNLLQDARLSVAAESAKAYNDYRFCQQKVRL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + L+ ++ EL+ G S +A SD+ + + + + L Sbjct: 189 YERYLESKTRSAELTASATAHGFKSDSDNALAQATQAQAASDLNDQQMQCELQIKAMVAL 248 Query: 237 LGYPATEFLHYMQKQS-NNFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G + + + QP + +P +PA L+ RPD+ E+ LA + A++G+ Sbjct: 249 TGMAEPQLRERLAPRDFTVLQPGSFDVP---SVPAVLLEQRPDLLAAERDLAAASAQVGV 305 Query: 295 AKSDLYPSLSLNGSIA-LTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++D YP ++L+G+I + + NS N WSFGP + +P+FD G+ K+N+ A S + Sbjct: 306 KEADRYPKITLSGNITPVRYLNSGVTNNALTWSFGPTIDIPLFDMGQRKANVSAAWESLR 365 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ AIKEVE L ++ LQ A + + +++ Y G + + Sbjct: 366 AADSNYRSKARTAIKEVEQKLLTLQSYNARQPSLQQAADNYAQALQAISQRYEAGFDNAI 425 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D+ R + + L+ + + ++LYIA+G G+ Sbjct: 426 DLETTRRNALEADYALTQLNQNRITTLIELYIAVGGGW 463 >gi|296159757|ref|ZP_06842579.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295889971|gb|EFG69767.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 509 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 119/465 (25%), Positives = 220/465 (47%), Gaps = 35/465 (7%) Query: 13 VLLAGC-TVGPEYTKPHM----------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 V L GC VGP Y P P+ ++ +N+ + WW+ ++D L Sbjct: 20 VALDGCMNVGPNYALPQQALVNAPLANTPIEGADAALTTGRNVPPV----WWKLYDDPVL 75 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRA-DLFPSSYASISHRF------------ 108 N LV ALQ N + A + ++E + +A F +++ R Sbjct: 76 NGLVDEALQSNTDLRVAAANLARSREALGVAQAQGGFSGKTSALIERAQESAEQYLLTEK 135 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +P + G + ++IDLFG+ RR +E++ A+ +S A D+A++ V++ ++ SY++ Sbjct: 136 LPVVNEGDIG-ISVSYEIDLFGKLRRGVEAAQADSESVQAAADLARITVVADVVRSYVEQ 194 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + + IA Q L L K+ +++S G ++ + + + ++ ++ +DIP + Sbjct: 195 CSAADELRIAQQSLALQKQRVDVSRRLRDAGRGNQPDVTRGQTQVDTLSADIPRYTARRK 254 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + ++ LL ++ + + + P + PI IG A L++ RPD+R E++LA Sbjct: 255 IAQYRLAALLARAPSDLPPAVL--ACDTLPQIRQPIPIGDGAALLKRRPDVREAERQLAA 312 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 S A+IG+A LYP++S+ S LT ++ W FGP + F + +R Sbjct: 313 STARIGVATGALYPTVSIGASAGLTGILEDLGTSPTARWGFGPLISW-TFPANGARGRVR 371 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++S+Q + VL A++E E +L + D L+ AV+ S + Y Sbjct: 372 EAQASSQVALAKFDGVVLTALRETETSLATYASDYARADALRAAVKSAAASADETHRLYL 431 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S + LD R + + A+ Q+A V+L++A+G G+ Sbjct: 432 AGRESFISDLDATRTLTSTKSQAAAAEGQVAIDQVNLFLALGGGW 476 >gi|320105434|ref|YP_004181024.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319923955|gb|ADV81030.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 498 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 224/474 (47%), Gaps = 34/474 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-------NIDTLKWWESFND 58 A+ L +++ GC VGP Y +P M P + + + ++ +W F D Sbjct: 31 ALAGLLTLMIVGCRVGPNYARP-MGTTPQSYRGALAPEIAPATQAGASLGDRQWAAVFQD 89 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN-LKTN 115 L +LV ALQ NL + A +R+ A+ + R+ P+ S S IP+ L N Sbjct: 90 PVLQRLVAEALQNNLDLRVAAQRVLEAQAQVGITRSQQMPTINGGGSYSALQIPSSLAGN 149 Query: 116 -----------STGQLDSD--WKIDLFGQ-RRHIESSLANL-DSAYAQVDIAKLNVISKL 160 S G + W +D +G RR E++ A L SA+ Q ++ ++ ++ Sbjct: 150 KSDGTPANSFFSGGGFSASAAWNLDFWGMYRRQTEAARAELLASAWGQ-RATRVTLVQEV 208 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y R E++ I + + + +++L+ G S+ + E + S +++P Sbjct: 209 AEAYFRLRSLDEQLEITNNTIKARQDSLQLTQSLEKYGFGSRADTRQAEELLHSALANLP 268 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + + IS LLG+ + + K ++ P + G+P+ L+ RPDI+ Sbjct: 269 EIRRQIAVQENTISILLGHN-PDGVERGLKVADQPHPE---EVPTGVPSQLLERRPDIQR 324 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A+IG+AK+ +P +SL GS + N F N +W L PIFD Sbjct: 325 AEATLIAANARIGVAKAQFFPQISLTSMGGSASNQLQNIFSSKNAYWYAAGSLSEPIFDG 384 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I+SN +++ QE + +++T+L A+KEV N+L + E ++ + V ++ Sbjct: 385 GRIRSNYHYSQAQQQEMLLEYRKTILTALKEVSNSLVAYKETRERRAEQTALVVSATDAV 444 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + Y G S L++L + ++ L++++ Q A S V LY A+G G+ Sbjct: 445 RLARLRYSGGNTSYLEVLTNDTNLYDAQLQLALSQEQEAVSLVQLYAALGGGWQ 498 >gi|271499955|ref|YP_003332980.1| RND efflux system outer membrane lipoprotein [Dickeya dadantii Ech586] gi|270343510|gb|ACZ76275.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya dadantii Ech586] Length = 494 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 29/466 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+YT+P + + Q ++ + + L WWE F D L + V ALQ Sbjct: 15 LLAGCAVGPDYTRPAVSMQEKYLGQEAVNQRHAATHAELLTWWEGFGDPQLTRFVTQALQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLKT------NST------ 117 QNL++ QA+ R+ A+ + + A L PS + + R +++T NST Sbjct: 75 QNLSLAQASARVAQARAGLGAANAALLPSGNLSGQAGRAYQSVETPLGRVLNSTPGFDRY 134 Query: 118 -----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 L + W++D+FG RR E++LA ++ A V +L V ++ YI R + Sbjct: 135 GNTYEADLGASWELDVFGGLRRGREAALAEYQASEAGVAATRLAVAAQTADIYITIRGLQ 194 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++A + + + + + + +G ++L + + E + +++ +P L+ + ++ Sbjct: 195 ARLNVARRQVQTQQDLLATINRLYGKGLAAELQVKQAEGALAQVQASVPVLQTALDTAMN 254 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +LG P T + + S G P +L+R RPD+ E++LA S A Sbjct: 255 ALDVMLGSAPGTNRAVLVAETSAIP--AAPQIAATGTPGELLRRRPDLIVAERRLAASNA 312 Query: 291 KIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A ++ YP SL+G + ++ N F + S L +FD G+I + I + Sbjct: 313 RIGVAIAEYYPKFSLSGLLGSATTVSSGNLFSNGASQSSGVIGLRWRLFDFGRINAQINQ 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ E ++ VL A ++VENA +++ ++ L V+ ++ + Y+ Sbjct: 373 AKGQEAEMLAAYRLAVLQATEDVENAFSALVNHEEQARVLTQGVDSLSRARDAAFAAYQH 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G SL+++L + + + A+ + A++ V + A+G G+ P Sbjct: 433 GTLSLIEVLQADESMLRASDARLQAQAESARAAVAAFNALGGGWQP 478 >gi|257093303|ref|YP_003166944.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045827|gb|ACV35015.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 478 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 116/462 (25%), Positives = 220/462 (47%), Gaps = 34/462 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LLAGC VGP+Y +P L ++G +WW FND +LN+LV AL N Sbjct: 21 LLLAGCVVGPDYVRPASTLPEHYPTVGTESRATAPVNPEWWTLFNDATLNQLVDQALAAN 80 Query: 73 LTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLK-TNSTGQ 119 + A R+ A++ +V A L+P+ S + S + +L+ N Sbjct: 81 QDLQAAVARLEASEAAARAVGAALYPAVGLEASASRNRISGETASGKESGSLRYNNHRAA 140 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L +++DL+G+ +R E++ A + S+ D +L +I ++ Y+ R ++ + Sbjct: 141 LTLSYEVDLWGRVQRSNEAARAEVLSSRFGRDSIRLALIGQVANEYLALRSHDAQLEVTR 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q L+ ++++++ + G+ S L L + E+ + + +++ + + + L G Sbjct: 201 QTLESRRESLKIVQARLEAGSASGLELAQAESALSGAQGQWSQVKRLRALAENQLGLLTG 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P +Q IP+ G+P+ L+ RPD+R E+ L + A+IG+ Sbjct: 261 QPGLRIAAASLEQ---------IPLPPTPPAGLPSSLLAARPDVRQAEENLVAANARIGV 311 Query: 295 AKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 AK+ +PS+ L G S+AL + F G WS L +PIF+ GK + + +A + Sbjct: 312 AKAAYFPSIGLTGLYGGESVALA--DLFSGSAGIWSAAIGLAMPIFNAGKTGAGVDQATA 369 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 QE T+++T+ A +EV +A+ ++ + V ++++ L+ Y G Sbjct: 370 IQQESVATYRKTLQTAFREVSDAIVNLGDYADEEAAFAAQVAASRRALDLAQTRYASGYA 429 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD+LD +R ++ +++ + VDL+ A+G G+ Sbjct: 430 AYLDVLDSQRTLNAAQLLYLASRKNRLSAAVDLFKALGGGWQ 471 >gi|330960969|gb|EGH61229.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. maculicola str. ES4326] Length = 487 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 120/470 (25%), Positives = 224/470 (47%), Gaps = 37/470 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTSLNK 63 ++ I LL+ C VGP+Y +P M P QF ++ + D + WW+ + D LN Sbjct: 20 LAVCIALLSACAVGPDYQRPTMAA-PQQFKAVQGWRAATPGDAMAKGAWWQVYGDKDLNA 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIP 110 LV+ N T+ Q + A+ + S RA P+ + S + Sbjct: 79 LVERLNTSNQTVAQYEAQYRQAQALVRSSRAAFLPTLDLTTGKTRSGQGTGTSSTGTSAS 138 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ + QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R Sbjct: 139 GIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRV 198 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + +D Y++++ L+ ++ G + + S+ + + ++KS ++D+ L Sbjct: 199 IDEQKRLLESTVDAYQRSLTLTQNQYRAGISGRDSVAQAQTQLKSTQADLIDLAWQRAQF 258 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKL 285 + I+ L+G +F + IP I G+P+ L+ RPDI E+ + Sbjct: 259 ENAIAVLMGMAPADF---------SLPAIATIPHLPDIPPGLPSQLLERRPDIAAAERSV 309 Query: 286 ADSVAKIGIAKSDLYP--SLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ YP +LS++G + T N N WS GP+L L +FD G+ + Sbjct: 310 MGANANIGVAKAAYYPDFTLSMSGGYNSSTFANWISLPNRFWSVGPQLALTLFDGGRRSA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + R E + +++TVLN +EVEN L + + A+ + S+ L+ Sbjct: 370 EVERTEDLYDQTVAQYRQTVLNGFQEVENYLIQLKVYGDEAAVREEALVFARDSLRLTNN 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 430 QYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLLAS-VQLIAALGGGWD 478 >gi|46446853|ref|YP_008218.1| putative outer membrane protein of AcrAB(MexAB)-OprM multidrug efflux pump [Candidatus Protochlamydia amoebophila UWE25] gi|46400494|emb|CAF23943.1| putative outer membrane protein of AcrAB(MexAB)-OprM multidrug efflux pump [Candidatus Protochlamydia amoebophila UWE25] Length = 486 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 240/474 (50%), Gaps = 35/474 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNKLV 65 F +F LL C Y P + + P +++ + + + + L WWES ND LN+L+ Sbjct: 8 FLIFTSLLTSCCSHRSYVPPSLDI-PYEWNSPLSDGMHTNSPKHLIWWESLNDPILNRLI 66 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------------- 111 K+A QNL + A RI A+ +DL+P S S+ I + Sbjct: 67 KLAAFQNLDLYLAGTRILEARLQRKGKNSDLYPHVDMSCSYSHIESHQNVVLNRILKHSQ 126 Query: 112 --LKTNSTG------QLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIP 162 LKTNS+ D+DW+IDLF ++ ++L A +++ + + + +++ Sbjct: 127 NKLKTNSSKLNLFEIGFDADWEIDLFQSNQYEMNALEAQIEANEENFNDIWVTLSAEIGR 186 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI+ RH + ++ + ++ ++ + L+ G + + ++ ++ ++++ P + Sbjct: 187 NYIELRHLQHKLILLNKQIESQADILHLTEELLQIGMANSIDILTATQQLATLKARKPVI 246 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 E S + ++++S LLG +P + + + SN P L + IGIP++L+R RPDIR Sbjct: 247 EFSIQKTIYHLSILLGQFPGE--VEGLLEFSN--LPCLPVEKPIGIPSELLRRRPDIRRA 302 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSF--PGYNTHWSFGPKLYLPIFDK 337 E++LA + IG A++ L+P LSL G + + H S P + W P+L +PIF+ Sbjct: 303 ERQLATATESIGSAEAALFPKLSLKGFVGMVTPHLKSILNPTMVSTWFANPQLLMPIFNS 362 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 +K ++ + ++ +Q+TVL A++E ENA+ S + + + +L A +++ Sbjct: 363 RLLKRDVDYHKLKTKQALFEYQKTVLEALEETENAIASFHYELERHQQLSVAYSAAQETQ 422 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Y +G + L++ RA ++E + ++ QL Y+ LY ++G G+N Sbjct: 423 RGTLELYLKGFKNYLEVQFTNRALIELEEAFNESQMQLILHYIALYKSLGGGWN 476 >gi|194367150|ref|YP_002029760.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194349954|gb|ACF53077.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 470 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 118/468 (25%), Positives = 217/468 (46%), Gaps = 27/468 (5%) Query: 7 IFSLFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +F F+ LA CT+GP++ +P L + N I+ D WW F+D L Sbjct: 6 LFRTFVAASLCTALAACTMGPDFVRPQAELPSHWQGEAVAGNAIDQDA-AWWAGFDDPLL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---NSTG 118 +L L NL + A R+ ++ AD PS AS S N + + +G Sbjct: 65 AQLAGQVLAANLDLQLAANRVQQSRAARGITAADRLPSVSASASGVRSRNSEVGLNDPSG 124 Query: 119 QLDSD------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 D W++DL+G+ RR +E++ A + A ++ ++++ Y+ Sbjct: 125 NGGRDDYGLFQAGIGLSWELDLWGRVRRQVEAADARVQMAEEDAHAVRIALLAETARDYL 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++ ++I L + L+ + QG S L + A++ S+++ I L Sbjct: 185 QLRATRQLLAITEDNLSIALDMKRLTEARQQQGVASTLQVSSASAQVASLQARIAPLRHR 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ LL P +Q ++ P L + +G+P++L RPDIR E L Sbjct: 245 ESQLRNALAFLLAQPPQALDAQLQDARRDW-PALP-AVAVGVPSELAERRPDIRRAEAAL 302 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKS 342 + A IG+AK+ P ++LNG + G+N H +S GP + +PIF G++K+ Sbjct: 303 HAATAGIGVAKASFLPRITLNGDAGFQAKQLDDLDGWNAHRFSIGPSISVPIFQGGRLKA 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ + Q+ + ++ TVL A EV++A+ +++ +L AV+ + ++ + Sbjct: 363 NLALSRLQQQQSALQFRRTVLQAWHEVDDAIDGYAAEQQRTVQLHVAVDESESALGAARR 422 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G +LD+L +R + L+ ++ A + V+LY A+G G+ Sbjct: 423 QYQAGVVDMLDVLTTQRIALDNQAALANSQATAAIARVELYRALGGGW 470 >gi|116626859|ref|YP_829015.1| RND efflux system outer membrane lipoprotein [Candidatus Solibacter usitatus Ellin6076] gi|116230021|gb|ABJ88730.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Solibacter usitatus Ellin6076] Length = 467 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 121/472 (25%), Positives = 235/472 (49%), Gaps = 33/472 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL---INIDTLKWWESFNDTSL 61 R + L + + GC GP Y +P + L P +F ++I KW + F D L Sbjct: 4 RIVLVLAALAMCGCIQGPNYKRPQLEL-PGEFRGAPPPGADFSVSIADTKWQDLFPDQVL 62 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----------SSYASISHRFIP 110 N++V AL+QN + A +R+ A+ + RA+ +P ++ ++ F+P Sbjct: 63 NQMVTTALKQNFDLRIAAQRVEEARAQLGVTRANQYPLLQGQAGFTATRPSSAGANTFVP 122 Query: 111 ---NLKTNSTG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL ++ T L W++D++G+ +R E++ A ++ ++++S ++ +Y Sbjct: 123 PGTNLSSSYTSLGLPLSWELDIWGRLKRQTEAARARYLASEEGRRAVGVSLVSDVMEAYF 182 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + I+ + + K ++ + L+ +GA S L + + E + + I E++ Sbjct: 183 QLLEQDLELDISRKTQGIAKDSLNIVELRRQRGAASGLDVSQAEQLLYTAGVQIAAAERA 242 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQE 282 + +S L G PA Q + + + +P + G+PA L+ RPDIR E Sbjct: 243 IAQSEDLLSLLQGAAPAG------QARGRKLE-EIPMPAQLPPGLPATLLERRPDIRQAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + L + A+IG A++ +P LSL+ G+ + N G ++ P IFD G+ Sbjct: 296 QNLVAANAEIGAARALYFPQLSLSAFAGAQSRGLSNIVTGPARVFTVAPSALQTIFDAGQ 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I+SN+R E+ +E +T+Q+++ +A++EV +AL + + ++ T+ ++ V ++++ L Sbjct: 356 IRSNVRFTEAQKRELLVTYQKSIYSAMREVADALIAFDRLREQRTQEENLVHTLEETVRL 415 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + YR G S L +LD +R +++L+ + Q S V LY A+G G++ Sbjct: 416 SELRYRGGLDSYLQVLDAQRNLFNGQLNLAQLRLQERVSVVQLYRALGGGWS 467 >gi|303257121|ref|ZP_07343135.1| RND efflux system, outer membrane protein, NodT family [Burkholderiales bacterium 1_1_47] gi|331000924|ref|ZP_08324561.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Parasutterella excrementihominis YIT 11859] gi|302860612|gb|EFL83689.1| RND efflux system, outer membrane protein, NodT family [Burkholderiales bacterium 1_1_47] gi|329569883|gb|EGG51640.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Parasutterella excrementihominis YIT 11859] Length = 504 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 221/460 (48%), Gaps = 40/460 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC VGP+Y +P++P+ I + + + + +WW +ND +L+ V A+ N T+ Sbjct: 19 GCAVGPDYDRPYVPVPKDYRHIQSEEADLGLLKARWWTEYNDPNLDFFVSKAIANNRTLQ 78 Query: 77 QATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQL------------DSD 123 Q + A + R++LFP +Y+ + +L T + + + Sbjct: 79 QTMANVERAAAQLTVARSNLFPQLNYSGDLGKSKASLNTPTGAAMGDKPIKSYETLASAS 138 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+IDL+G+ RR ES+ A L + A A +VI +I +Y+ +E+ IA + + Sbjct: 139 WEIDLWGKIRRQTESARATLRATEAAHRAAISSVIGSVISTYLSILTTEEQYKIAVETAE 198 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y K +L L+F G S++ + + ++ +S IP + ++ +++S L G P Sbjct: 199 SYHKTYQLFLLRFKHGNVSEMEVAQAWSQWESAMVQIPQIRQNNTELKNSLSVLTGVPVD 258 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +F + L +P + GIP+ L+ RPD+ E++L + A IG AK+ +P Sbjct: 259 DFPKFKTLD------ELNVPAVVAGIPSQLLEERPDVIQAEEQLRAANADIGAAKALYFP 312 Query: 302 SLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S+SL+G + + D F G + W + + PIF G + + +R AE+ + + Sbjct: 313 SISLSGGLGFSSDQLKELFKGPSKVWQYAGNISGPIFHWGAVTAGVRSAEAQQKALLAAY 372 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR-------QGRYS- 410 Q V A +V+NAL+ + ++ +L+ K+S+ +S+ +Y QG Y+ Sbjct: 373 QLAVSTAFADVDNALS---RRQNVIEELR-----SKRSLVMSLEDYSRLANAQYQGGYTG 424 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L E++ ++ L+ K + S +Y A+G G+ Sbjct: 425 YFTVLQAEQSLLPQQISLAEVKSRALNSVAQVYQALGGGW 464 >gi|209544446|ref|YP_002276675.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209532123|gb|ACI52060.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 517 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 226/504 (44%), Gaps = 67/504 (13%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFN 57 + R + + F L L GCTVGP++ KP + TQ + ++D WW FN Sbjct: 11 MTRRLLAGFSCLALVGCTVGPDFHKPRVTAASGWRSTQPPAESRVTTASVDP-AWWTLFN 69 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------------- 98 D L +L NL + A R ++ RA FP Sbjct: 70 DPILTRLEAEVAASNLDLRAAGLRFMQSEAERRIARAAQFPHAEANASYARERASTNGIL 129 Query: 99 -----------SSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIES 137 S AS + F P S G + + W++D +G RR +E+ Sbjct: 130 GLLGTMEREGAGSVASGTQGFGPTALPGSVGNPSFNLPQYGMSASWEVDFWGHVRRQVEA 189 Query: 138 SLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 + A + ++ + DI ++++++ YID R + +I I + +D+ +++L+ ++F Sbjct: 190 ATAAMHETEEMRRDI-LVSLMAETAQDYIDLRAVQTQIGILNHNIDVAANSVKLTGMRFQ 248 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 QGA ++L + + ++ + S + L+ H ++ L FL Q + + + Sbjct: 249 QGAATRLDVAEATGQLHTFTSRLAPLKA---QATHLLNAL------SFLVARQPGALDAE 299 Query: 257 -------PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 P++ I +G+P++L RPDIR +L + A IG+A +D +P ++L+GS+ Sbjct: 300 LGPARDIPSVPATIPVGLPSELAERRPDIRMAADRLHAATASIGVAIADFFPRITLSGSL 359 Query: 310 ---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 AL + + FGP LPIF+ G++ +R + QE +Q TVL A Sbjct: 360 DVQALQFSGLGSWASRQYGFGPTATLPIFEGGRLTGQLRLRRAQQQEAATMFQRTVLKAW 419 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +E+++A+ ++ +L AV ++ ++ + Y QG L++L ++ A + Sbjct: 420 QEIDDAMADFTAAQQRRDELAEAVRENEIAVDTARAQYVQGSSDFLNVLTLQNALLSSQS 479 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGY 450 L+ A +A S LY A+G G+ Sbjct: 480 ALADATATVAGSVTHLYRAVGGGW 503 >gi|170721972|ref|YP_001749660.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169759975|gb|ACA73291.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 495 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 230/474 (48%), Gaps = 45/474 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L LL+ CT+ P+Y +P + P QF N I WWE + D+ LN L Sbjct: 27 GLCAALLSACTLSPDYHRPELST-PAQFKQAEGWTQANPSDAIARGAWWEIYGDSGLNAL 85 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N ++ QA + A+ + S RA LFPS + S N TG Sbjct: 86 VEELNRSNQSVAQAEAQYRQAQALVRSSRASLFPSLDLTTSK----NRSAQGTGSSSSSL 141 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ ++++A + +L+ S+L+ +Y Sbjct: 142 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETMNANEASAEASFADLAAIRLSQQSELVQNY 201 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y++++ ++ ++ G + ++ + ++K+ ++D+ L Sbjct: 202 LQLRVIDEQKRLLEATVATYERSLRMTENQYRAGVSGPDAVAQARTQLKTTQADLIDLVW 261 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ LLG EF K P L IP+++ P+ L+ RPDI E+ Sbjct: 262 QRAQFENAIAVLLGKAPAEFALADSKSI----PALPQIPVSL--PSQLLERRPDIASAER 315 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG+A++ +P LSL+ G + T ++ N +WS GP+L L +FD GK Sbjct: 316 NVMAANANIGVARAAYFPDLSLSMSGGYSSSTFNDWIQLPNRYWSVGPQLALTLFDAGKR 375 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 + + R + + +++TVL+ KEVEN L + D+ +V Q A++ ++S+ Sbjct: 376 SAEVDRTVAVYDQTVAQYRQTVLDGFKEVENYLVQLKVYGDEAVVR--QEALDAARESLR 433 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 434 LTDNQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLIAALGGGWD 486 >gi|94310643|ref|YP_583853.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354495|gb|ABF08584.1| Cation/multidrug efflux system outer membrane porin [Cupriavidus metallidurans CH34] Length = 486 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 25/452 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC VGP+Y +P + + P + + ++ WW ND L+ L+ A N + Sbjct: 19 GCAVGPDYVRPPVDV-PQAYRFADEGISVPQTPATYWWSQMNDPVLDGLIATARANNKDL 77 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------------QLDSD 123 L A R+ +++ R+ LFP TN T + Sbjct: 78 LIAAARVEEYYGRVMTTRSGLFPQVGIEAGGGRQRISTTNGTALPINNPFNQTHVAATAS 137 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+IDLFG+ RR E++ A+ ++ +++V++ +YI R R+ I+ + L+ Sbjct: 138 WEIDLFGRIRRLTEAAKADWQASELARRSTEISVVAATASAYITLRDLDNRLRISQETLE 197 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + +EL +F G S++ + +E S + + + + ++ LLG Sbjct: 198 SRRGALELFRERFQGGVVSEVEFAQARSEYASALTSVEQFRQQVALQEDLLAGLLGENPR 257 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E L +P + +G+P+ L+ RPD+ E+ L + A+IG A+++ +P Sbjct: 258 EIPR------GKSISELTLPGVPVGLPSTLLEQRPDVLLAEQNLVAANARIGAARAEYFP 311 Query: 302 SLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 ++SL G+ + G WSF + +PIF G I ++++AE+ + + Sbjct: 312 TISLTGAFGAASTALSGLWTGPARAWSFAGLISMPIFTGGAIAGDVKQAEAIQTQSLQAY 371 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+++ A +EV +AL S+ + + V+ + SL+ Y G S L++LD E Sbjct: 372 QQSIQTAFREVADALVSVQRTRDQLNAKTDQVDALGRYASLARDRYEGGYTSYLEVLDSE 431 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 RA ++D S V LY A+G G+ Sbjct: 432 RALFAAQLDQSTLIGSEFGQLVQLYKALGGGW 463 >gi|37964197|gb|AAR06180.1| putative multidrug efflux pump [Neisseria lactamica] Length = 437 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 30/447 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F + + I L W + F D L KL+ IAL++N + Sbjct: 3 LSACTMIPQYGQPKVEVAET-FKNDTADSGIRAVDLGWHDYFADPRLQKLIDIALERNTS 61 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------------- 121 + A ++ + R +L P+ N + G LD Sbjct: 62 LRTAVLNSEIYRKQYMIERNNLLPT--------LAANANGSRQGSLDGGNVSSSYNVGLG 113 Query: 122 -SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +++DLFG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A + Sbjct: 114 AASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAEEAMSLAQR 173 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +L + +LS L++ G S ++L + EA I+S ++D +S + ++TL+ Sbjct: 174 VLKTREATYKLSELRYKAGVISAVALRQQEALIESAKADYANAVRSREQARNALATLINQ 233 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P + L F + G+ ++++ +RPDIR E L + A IG A++ Sbjct: 234 PIPDDLPAGLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAF 290 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS+ L GS+ F WSF P + LPIF G K+N+ A+ Q Q + Sbjct: 291 FPSIRLTGSVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDAAKLRRQAQIV 350 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ V +A ++V NAL + + K L K+++ L + Y+ G LD+LD Sbjct: 351 AYEAAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLD 410 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLY 443 ER++ E A+ A++ DLY Sbjct: 411 AERSSYSAEGAALSAQLTRAENLADLY 437 >gi|237709689|ref|ZP_04540170.1| outer membrane efflux protein oprM [Bacteroides sp. 9_1_42FAA] gi|265754321|ref|ZP_06089510.1| outer membrane efflux protein oprM [Bacteroides sp. 3_1_33FAA] gi|229456325|gb|EEO62046.1| outer membrane efflux protein oprM [Bacteroides sp. 9_1_42FAA] gi|263235030|gb|EEZ20585.1| outer membrane efflux protein oprM [Bacteroides sp. 3_1_33FAA] Length = 465 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/419 (25%), Positives = 208/419 (49%), Gaps = 27/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ S+ R+ Sbjct: 54 WWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPA--LSLDARWNRQ 111 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +TG ++ W++D+FG R+ +++ N ++ + + +++ Sbjct: 112 QTSGNTGTGQPQSRVGYYDATVNMSWQVDVFGSIRQRVKAQKENFAASREEYNATMVSLC 171 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +Y + R ++ +S+ + K ++++ +++ G SKL + + ++ S + Sbjct: 172 AEVASAYFNLREAQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAKSVYYSTLA 231 Query: 218 DIPTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 IP E ++ ++ LLG YP T L ++ P+ P+ +G+P L+ Sbjct: 232 SIPATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVGLPGQLLLR 286 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLY 331 RPD+R E+++ A +G +K+D PS LNGS +HD F ++ WS P + Sbjct: 287 RPDVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTKRSSMTWSIAPSMS 346 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 IF+ G+ +N+R + E + TVL A++EV+NA++S K + + + Sbjct: 347 WTIFNGGQRANNVRLQRAQLDETINQFNTTVLTAVQEVDNAMSSYKNSIKQIVACREMLN 406 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K++ LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G+ Sbjct: 407 QGKEAFKLSLDLYKQGLSPFQNVLDAQRSLLSYENSLVQAQGYSLLCLIQMYQALGGGW 465 >gi|162146069|ref|YP_001600527.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161784643|emb|CAP54180.1| putative outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 507 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 226/504 (44%), Gaps = 67/504 (13%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFN 57 + R + + F L L GCTVGP++ KP + TQ + ++D WW FN Sbjct: 1 MTRRLLAGFSCLALVGCTVGPDFHKPRVTAASGWRSTQPPAESRVTTASVDP-AWWTLFN 59 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------------- 98 D L +L NL + A R ++ RA FP Sbjct: 60 DPILTRLEAEVAASNLDLRAAGLRFMQSEAERRIARAAQFPHAEANASYARERASTNGIL 119 Query: 99 -----------SSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIES 137 S AS + F P S G + + W++D +G RR +E+ Sbjct: 120 GLLGTMEREGAGSVASGTQGFGPTALPGSVGNPSFNLPQYGMSASWEVDFWGHVRRQVEA 179 Query: 138 SLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 + A + ++ + DI ++++++ YID R + +I I + +D+ +++L+ ++F Sbjct: 180 ATAAMHETEEMRRDI-LVSLMAETAQDYIDLRAVQTQIGILNHNIDVAANSVKLTGMRFQ 238 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 QGA ++L + + ++ + S + L+ H ++ L FL Q + + + Sbjct: 239 QGAATRLDVAEATGQLHTFTSRLAPLKA---QATHLLNAL------SFLVARQPGALDAE 289 Query: 257 -------PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 P++ I +G+P++L RPDIR +L + A IG+A +D +P ++L+GS+ Sbjct: 290 LGPARDIPSVPATIPVGLPSELAERRPDIRMAADRLHAATASIGVAIADFFPRITLSGSL 349 Query: 310 ---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 AL + + FGP LPIF+ G++ +R + QE +Q TVL A Sbjct: 350 DVQALQFSGLGSWASRQYGFGPTATLPIFEGGRLTGQLRLRRAQQQEAATMFQRTVLKAW 409 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +E+++A+ ++ +L AV ++ ++ + Y QG L++L ++ A + Sbjct: 410 QEIDDAMADFTAAQQRRDELAEAVRENEIAVDTARAQYVQGSSDFLNVLTLQNALLSSQS 469 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGY 450 L+ A +A S LY A+G G+ Sbjct: 470 ALADATATVAGSVTHLYRAVGGGW 493 >gi|257091812|ref|YP_003165453.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044336|gb|ACV33524.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 484 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 119/463 (25%), Positives = 220/463 (47%), Gaps = 27/463 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + + +LLAGC +GP+Y +P + P F DTL WW+ F D L++L+ Sbjct: 6 VLAATAILLAGCLLGPDYRRPQVAA-PEAFQYAPKDAADTADTL-WWKQFQDPVLDQLIA 63 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-------FI------PNL 112 L N I A + A + R+ LFP Y + R F PN Sbjct: 64 EGLAHNSNIAIAAANVEQAAAVLTQTRSQLFPQLGYGASGERQRSLEPAFAALLRDYPNP 123 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T L + W+IDL+G+ RR E++LANL + L++++ + SY+ R Sbjct: 124 STAYQAGLSASWEIDLWGRIRRQSEAALANLLATDEARRGVVLSLVASVANSYLQLRGLD 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++++A + L Y ++++L L++ G SK+++V+ +++ +S + IP +E + Sbjct: 184 AQLAVAKKTLSAYGESVKLFELQYKYGQVSKMNVVQAQSQYESAAAQIPLIESQIAQTQN 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 +++ L+G +L +P + G+P+ L+ RPD+ E+ L + A Sbjct: 244 SLAVLIGRDPGPIAR------GKSVDDLVLPQVPAGVPSALLERRPDLLQAEQTLIAANA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG AK+ +PS+SL G+ N F G + W++ + PIF G + + +A Sbjct: 298 QIGAAKALYFPSISLTGAFGGASSDLSNLFKGSSRVWNYTGSIVGPIFTFGAVSGQVAQA 357 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + +Q ++ NA +V+NAL + + ++ + + V + L+ + Y G Sbjct: 358 EAGQAAALLNYQLSIRNAFADVDNALVANQKLQEQLAAQKRLVVALSEYSRLARLQYEGG 417 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L E+ E++L+ + L S V++Y A+G G+ Sbjct: 418 YTGYSTVLQAEQTLFPAELNLASIRASLFASSVNIYKAMGGGW 460 >gi|161520480|ref|YP_001583907.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189353329|ref|YP_001948956.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160344530|gb|ABX17615.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189337351|dbj|BAG46420.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 491 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 115/468 (24%), Positives = 215/468 (45%), Gaps = 43/468 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSI--------GNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 C VGP++ +P + +F+ G+ + +W F D +L+ L++ AL Sbjct: 19 CAVGPDFVRPDT-VTAARFARDAHPATQDGSPPDASADADAAFWRGFGDPALSALIEAAL 77 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP------------NLKTN 115 N + A R +A+ + R D +P+ AS I H+ + + Sbjct: 78 AANQDLALAVSRYDASNALLSQARFDRYPTVTASGRIGHQLTSKDQAFGAPRSERDTSIS 137 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S G +++ W++DLFG+ RR IES A ++ A V ++ + +++ +Y+D R +ER+ Sbjct: 138 SVG-INAGWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAAEVAATYVDLRGSQERL 196 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA ++ + L + + G S+L + A+ ++ S I E + ++ H ++ Sbjct: 197 RIARDNAANQQQTLALINARVAAGRGSELDAARARAQYEATTSRIAVYEAAIGVDEHRLA 256 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G + + P L ++ G P DL+R RPD+ E +L + A+IG+ Sbjct: 257 VLTGQRPDALVGRFDVPAGAPLPTLAADVDPGTPGDLLRRRPDVAAAEARLHAATARIGV 316 Query: 295 AKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGPKLYLPIFDKGKIKSNI 344 A +DL+P +L+G + T F G +T+ WSF D G++++ I Sbjct: 317 ATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDWSF--------LDVGRVRARI 368 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +++ A Q +++TVL A++E ENAL + + L A ++ L+ + Sbjct: 369 AASDAEAAGQLAQYRQTVLGALEETENALLRVARTRDEAAHLTRAAADSARAAQLAQTRF 428 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G ++LD +R + + + + + A S V LY A+ G+ P Sbjct: 429 SAGAIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYKALAGGWPP 476 >gi|254426774|ref|ZP_05040481.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] gi|196192943|gb|EDX87902.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] Length = 486 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 112/464 (24%), Positives = 216/464 (46%), Gaps = 43/464 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-------LKWWESFNDTSLNKL 64 + LLAGC VGP+Y P P P FS ++ + +W+ F+D L +L Sbjct: 19 LALLAGCAVGPDYQVPETPE-PDSFSAPHASATSSTTAGDFAQAEQDFWQGFDDPLLAQL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQ--- 119 ++ L N T+ A R + A + + + +PS AS S + + +++ G Sbjct: 78 IEQTLTANQTLQAALARYDRAAALLYGAKREQWPSVTASASGAEQHLADVERTPAGGGRE 137 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + W++D+FG+ RR ES A L + A + ++ + ++ SY + R Sbjct: 138 RVELYQAGIAAQWELDMFGRLRRATESQAAQLQAVGADLGALQVALAGQVASSYFELRGL 197 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R+ +A Q + + + +++ + G ++ V+ A+++ + +P+LE R + Sbjct: 198 QQRLQVAEQNVAIQTQTLDIVSARVNAGRGTEFDSVRARAQLERTRAALPSLEADIRAAM 257 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H I+ L G P + + N P I + P D++R RPD+ E++LA + A Sbjct: 258 HRIAVLTGQPPAALVDTL--AVNTGLPGSLPVIPVDSPGDVLRRRPDVAAAERRLAAATA 315 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPG--------YNTHWSFGPKLYLPIFDKGK 339 +IG+A +DL+P +L+ GS+A + F G W+F D GK Sbjct: 316 RIGVATADLFPRFTLSGLLGSVATDGGDLFTGPAESRRVALGVDWTF--------LDYGK 367 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +K+ I ++S++E +Q+ VL A++E E L ++ +L A + +++ +L Sbjct: 368 VKARIEAEDASSREALANYQQAVLVALEETETRLVRYQRSRQRAARLVRASDDAQRAAAL 427 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + Y QG ++L E+ ++ + ++ VD+Y Sbjct: 428 ARTRYEQGFIGYFEVLAAEQELTTTRDAQVRSQAAVTQAMVDVY 471 >gi|150002917|ref|YP_001297661.1| outer membrane efflux protein oprM precursor [Bacteroides vulgatus ATCC 8482] gi|149931341|gb|ABR38039.1| outer membrane efflux protein oprM precursor [Bacteroides vulgatus ATCC 8482] Length = 465 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/417 (24%), Positives = 204/417 (48%), Gaps = 23/417 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ Sbjct: 54 WWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPALSLDAGWNRQQT 113 Query: 112 LKTNSTGQ-----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 TGQ ++ +W++D+FG R+ +++ N ++ + + +++ ++ Sbjct: 114 SGNTGTGQPQSRVGYYDATVNMNWQVDVFGSIRQRVKAQKENFAASREEYNATMVSLCAE 173 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y + R ++ +S+ + K ++++ +++ G SKL + + ++ S + I Sbjct: 174 VASAYFNLREAQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAKSVYYSTLASI 233 Query: 220 PTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 P E ++ ++ LLG YP T L ++ P+ P+ +G+P L+ RP Sbjct: 234 PATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVGLPGQLLLRRP 288 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLYLP 333 D+R E+++ A +G +K+D PS LNGS +HD F ++ WS P + Sbjct: 289 DVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTRRSSMTWSIAPSMSWT 348 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G+ +N+R + E + TVL A++EV+NA++S K + + + Sbjct: 349 IFNGGQRANNVRLQRAQLDETINQFNTTVLTAVQEVDNAMSSYKNSIKQIVACREMLNQG 408 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K++ LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G+ Sbjct: 409 KEAFKLSLDLYKQGLSPFQNVLDAQRSLLSYENSLVQAQGYSLLCLIQMYQALGGGW 465 >gi|154250988|ref|YP_001411812.1| RND efflux system outer membrane lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154154938|gb|ABS62155.1| RND efflux system, outer membrane lipoprotein, NodT family [Parvibaculum lavamentivorans DS-1] Length = 475 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 223/472 (47%), Gaps = 29/472 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS------KNLINIDTLKWWE 54 MN +L + L CT+ P+Y +P P+ P+ + G + K+ + + L W + Sbjct: 1 MNRFSPALALSFLFLGACTLAPDYVRPAAPI-PSGWPTGAAYEDAAAKDGVEVADLGWQD 59 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNL 112 F + L+ AL N + +A + A+ RADL PS +++ +P Sbjct: 60 FFLSDEMRNLIAQALANNRDMREAVLNVEQARALYRVQRADLLPSISGDGTMTRERVPG- 118 Query: 113 KTNSTGQLDSD-----------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + TGQ + +++DLFG+ R + E +L + A++ +I+++ Sbjct: 119 DISGTGQAQTGTSYRVQANIASYELDLFGRVRSLNEQALQEYFATDEARRAAQIALIAEV 178 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R + +++ + L +K++EL + F +G +SKL LV+ + +++ + Sbjct: 179 ANAYLTLRADQRLLALTEETLQTQEKSLELVQMTFDRGISSKLDLVQSQTAVETARVNRY 238 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + ++ + ++ L+G P + + ++F +L G+P+DL+RNRPDIR Sbjct: 239 AFIRQVALDRNALTLLVGAPIDDDALDRAENIDSFVADL----PAGLPSDLLRNRPDIRQ 294 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS++L G+ + + F + WSF P++ LPIF Sbjct: 295 AEHVLQGANANIGAARAAFFPSITLTAAGGTASGSLSGLFEPGSGAWSFMPQISLPIFQG 354 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ AE ++ T+ A +EV +AL V Q V+ +S Sbjct: 355 GRNLANLEVAEIQKDINIARYEGTIQTAFREVADALAGRGTYDAQVAAQQALVDATDESY 414 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +L+ YR G S L +LD +R+ E +L + + V+LY +G G Sbjct: 415 ALAERRYRSGIDSFLTLLDAQRSLYAAEQELIRTRLARVSNTVNLYKVLGGG 466 >gi|167621752|ref|YP_001676537.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167351493|gb|ABZ74223.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 502 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 125/467 (26%), Positives = 218/467 (46%), Gaps = 35/467 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI--------DTLKWWESFNDTSLNKLVKI 67 AGC VGP Y +P + P F + + + D WW F+D L +LV + Sbjct: 18 AGCAVGPNYVRPTL-AAPAAFMGQAALDQRHAPAPVEQVADQTAWWRQFDDPVLTRLVGV 76 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH--------RFI---PNL 112 AL QNL + Q+ R++ A+ ++ S A L P S+ + +H R + P Sbjct: 77 ALDQNLDLAQSVARVSQARASLRSANAALLPSGNISAQGTKAHLSTQTPLGRLLNADPGF 136 Query: 113 KTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N + +D+ W+ID+FG RR E++ A +A A V A+L + ++ +Y+ R Sbjct: 137 DRNGSLYEANIDASWEIDVFGGLRRDQEAARAEYQAAQADVAAARLAIAAQTADTYVVIR 196 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + R+ IA + K + + +F +G ++L + + E + ++ +P LE Sbjct: 197 GLQSRLKIARDQVQTQTKLLSTVNYQFGKGVAAELQVRQAEGALAETQAGVPMLENGLEA 256 Query: 229 NVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ + LLG P T P + N PADLIR RPD+ E++LA Sbjct: 257 ALNALDVLLGAQPGTYRAELSAASPVPIAPTI---ANASGPADLIRRRPDLVVAERRLAA 313 Query: 288 SVAKIGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNI 344 S A IG A S+ YP SL+G A T + + + G L +FD G++ + + Sbjct: 314 SNAMIGSALSEYYPKFSLSGLAGTATTARSGVFDNGANQAQGVLGLRWRLFDFGRVGAEV 373 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + A+ E+ +Q+ VL A ++VENA +S+ + + L K+ S+ Y Sbjct: 374 KAAKGRNAEELARYQQAVLQATEDVENAFSSLVKRESQEQTLAGGETSLTKARDASLAAY 433 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G SL+++LD + + A+ + A++ + + A+G G++ Sbjct: 434 KGGVVSLIEVLDADNRLLATRDARAQAQTESARAAIASFRALGGGWD 480 >gi|209515382|ref|ZP_03264248.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209504102|gb|EEA04092.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 486 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 124/477 (25%), Positives = 232/477 (48%), Gaps = 33/477 (6%) Query: 5 RAIFSLFIVLL-AGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDT 59 R I +L + L AGC VGP+Y +P +P+ P +F ++ + + + D WW F D+ Sbjct: 5 RTIATLIVASLSAGCAVGPDYVRPGVPM-PERFQGQAAVDHRQATASADLATWWTGFGDS 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKT---- 114 L + V +AL QNL + QA R+ A+ + + A L PS S + + R +++T Sbjct: 64 QLTRYVTLALDQNLDLAQAAARVAQARAGLGAANAALLPSGSVSGQAARVYQSVETPLGQ 123 Query: 115 --NS-----------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 NS L + W++DLFG RR E++LA ++ A +L V ++ Sbjct: 124 VLNSRPGFDRYGNDYEANLSASWELDLFGGLRRGREAALAEYQASEAGAAATRLAVAAQT 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 YI R + R+ +A + + + + +L + +G ++L + + E + + + +P Sbjct: 184 ADIYITIRGLQTRLDVARRQVQTQQDLLSTVNLLYGKGLAAELQVRQAEGALAQVRASVP 243 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ ++ + +LG P T ++ P + G P +L+R RPD+ Sbjct: 244 ELQAGLDAAMNALDVMLGSQPGTHRAELVEAGHIPAAPQIG---TTGSPGELLRRRPDLI 300 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIF 335 E++LA S A+IG+A ++ YP LSL+G I + N F G + + L +F Sbjct: 301 VAERRLAASNARIGVAVAEYYPKLSLSGLIGSATSMASGNLFTGDASQAAGVLGLRWRLF 360 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+I + I +A+ E ++ L+A ++VE A +++ ++ + L V+ + Sbjct: 361 DFGRINAQINQAKGQQAEMLAAYRLAALHATEDVEKAFSALVNREEQASVLAGGVDSLGR 420 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + S Y++G SL+++L + + + + A+ A + VD + A+G G+ P Sbjct: 421 ARAASFAAYQKGVVSLIEVLQADESLLRASDARAQAQTASALAAVDAFKALGGGWQP 477 >gi|307129544|ref|YP_003881560.1| outer membrane protein [Dickeya dadantii 3937] gi|306527073|gb|ADM97003.1| Outer membrane protein [Dickeya dadantii 3937] Length = 492 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 120/466 (25%), Positives = 225/466 (48%), Gaps = 30/466 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+YT+P + + Q ++ + L WWE F D L + + ALQ Sbjct: 15 LLAGCAVGPDYTRPAVSMQEKYLGQEAVNQRHAAARAELLTWWEGFGDPQLTRFITQALQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLKT------NST------ 117 QNL + QA+ R+ A+ + + A L PS + + R +++T NST Sbjct: 75 QNLDLAQASARVVQARAGLGAANAALLPSGNISGQAGRAYQSVETPLGKVLNSTPGFDRY 134 Query: 118 -----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 L + W++D+FG RR E++LA ++ A V +L V ++ YI R + Sbjct: 135 GNSYEANLGASWELDVFGGLRRGREAALAEYQASEAGVVATRLAVAAQTADIYITIRGLQ 194 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++A + + + + + + +G ++L + + E + +++ +P L+ + ++ Sbjct: 195 ARLNVARRQVQTQQDLLATINRLYDKGLAAELQVRQAEGALAQVQASVPVLQTALDTAMN 254 Query: 232 NISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +LG P T H + P G P +L+R RPD+ E++LA S A Sbjct: 255 ALDVMLGAAPGT---HRAVLAETSAIPAAPQIAATGTPGELLRRRPDLIVAERRLAASNA 311 Query: 291 KIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A ++ YP SL+G + ++ N F + S L +FD G+I + I + Sbjct: 312 RIGVAVAEYYPKFSLSGLLGSATTVSSGNLFSNGASQSSGVIGLRWRLFDFGRINAQINQ 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ E ++ VL A ++VENA +++ +++ L V+ ++ + Y+ Sbjct: 372 AKGQEAEMLAAYRLAVLRATEDVENAFSALVNNEEQARVLTQGVDSLSRARDAAFAAYQH 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G SL+++L + + + A+ + A++ V + A+G G+ P Sbjct: 432 GTLSLIEVLQADESMLRASDARLQAQAESARAAVAAFKALGGGWQP 477 >gi|320107813|ref|YP_004183403.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319926334|gb|ADV83409.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 471 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 123/465 (26%), Positives = 228/465 (49%), Gaps = 38/465 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT------QFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 ++LAGC VGP+Y +P P P + +G +KN +I +W + F + L L+ Sbjct: 19 LVLAGCNVGPKYKRPVYPAPPAFRGADDEAIVGEAKN--SIADQQWTQIFKEPELQALIT 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS-------- 116 AL N + A +RI + + R+ FP S+ + + IP++ +S Sbjct: 77 QALANNYDLRIAAQRILEQQAQVQITRSQQFPTISAGGTGAGAEIPSIGGSSITSPLVVG 136 Query: 117 TGQLDSDWKIDLFG-QRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + L + W D +G R+ E++ L +AQ + +L ++ +++ +YI R ++ Sbjct: 137 SFNLSAAWNPDFWGLYRKQTEAARDQLLAQTWAQRAV-RLTLVQQVVTAYIQLRALDHQL 195 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA Q + + ++ L+ T G+ + + E + + S IP LE+ + + I Sbjct: 196 EIARQTYKIRQDSVGLTRQLETGGSVPLSDVRQAEQLLYTASSQIPQLEQQVQQQENAIK 255 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 LLG P T ++ P +P N +G+P++L+ RPDI+ E +L + A Sbjct: 256 FLLGDNPGT----IIRSSPTALSP---VPQNLPVGLPSELLERRPDIQQTEAQLKAANAN 308 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +P LS++ S + D SFP G T + G L P+F GK++ +R Sbjct: 309 IGVARAQFFPQLSISASGGVGGD-SFPDIFKSGAQTVYGIG-SLSQPLFAGGKLRGQLRL 366 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ + +E + +Q+T+ A ++V NAL ++N+ + + Q V+ K + L+ I Y+ Sbjct: 367 SQQTEKEMVLNYQKTIAGAFRDVSNALIAVNKQRAYREQQQLLVDAAKDATRLARIRYQG 426 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++L + ++ L A++ A + V LY A+G G+ Sbjct: 427 GSTGYLEVLTTDSNLFSAQLSLVTAQQNEALTLVQLYAALGGGWQ 471 >gi|113970279|ref|YP_734072.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-4] gi|113884963|gb|ABI39015.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-4] Length = 497 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 112/461 (24%), Positives = 232/461 (50%), Gaps = 36/461 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF-------SIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +AGC +GP+Y +P + L P+Q+ + N+ ++ L W + D L L++ Sbjct: 43 VAGCAMGPDYQRPELAL-PSQYQAQILSQTTAEQGNIKDVSALSWRHFYQDPVLISLIEH 101 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS----- 122 AL NL + A R+ AA+ + V + L+P A++ + +L + +T + S Sbjct: 102 ALANNLDLQMAQSRLLAARSKMTVVDSALWPEVSANLGYE--RSLDSGATSKDPSPTTAV 159 Query: 123 ------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G RR E++ A+ S ++ + +++IS + Y + ++R S Sbjct: 160 DLAGTVSWELDLWGANRRASEAAKADYLSEVEKLRLTYVSLISDIASRYYEWLDIEQRYS 219 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + + +K ++++ L+ G S L + + E E++S + +PTL+ + ++ + Sbjct: 220 VSIDTVGIRQKELDIAKLRHANGVISGLDVRQAEVELQSTKVTLPTLDYERKYKINQLHI 279 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG E+ Y N+ +P ++ G+P++L+ RPD++ E+ + + A++G Sbjct: 280 LLG----EY-DYAFPSPQGLPENVGLPYELSAGVPSELLTLRPDVKMSEQAMIAANAQVG 334 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IAK+ +P +++G ++ + F WS + PIF++GKI + A Sbjct: 335 IAKAAFFPKFTISGQYGRENNHLKDIFDSNGVTWSLLGGISAPIFNRGKIAAEYDIATEE 394 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A++ ++++ VL A +V +AL ++ ++ + + V+ L+ + Y+ G + Sbjct: 395 AKQSMLSYRNVVLTAYFDVNDALNNLKRAQEAIKAQRELVQSSSAYARLARLRYQNGVAT 454 Query: 411 LLDILDIERATAKVEVDLS--IAKRQLAKSYVDLYIAIGSG 449 LD++D +R ++ S + +QLAK + LY A+G G Sbjct: 455 SLDLMDAQRQLFSAQLAYSEILRDKQLAK--IALYRALGGG 493 >gi|119477619|ref|ZP_01617769.1| RND efflux system, outer membrane lipoprotein, NodT [marine gamma proteobacterium HTCC2143] gi|119449122|gb|EAW30362.1| RND efflux system, outer membrane lipoprotein, NodT [marine gamma proteobacterium HTCC2143] Length = 531 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 128/472 (27%), Positives = 236/472 (50%), Gaps = 36/472 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL----PTQFS-IGNSKNLINIDTLKWWESFNDTS 60 AI FI L + TVGP Y +P + L P + + N+ + + WW+ F+D S Sbjct: 18 AILCGFI-LCSCTTVGPSYQEPDVKWLSSWQPDLYGQLNNTSSQYQHELSFWWQLFDDES 76 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLK 113 LN+L+ A Q+N+ + A R+ ++ + + L+P S+ A+ + R L Sbjct: 77 LNQLILEAYQENIDLQLAGLRVLESRAQLGVAGSLLYPQLQQVNGSAIAAETRRRGGALS 136 Query: 114 TN-------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + TG + W++D +G+ +R +ES+ A ++ A ++ + +++ Y Sbjct: 137 SQDQSLISYQTG-FNLGWELDFWGKFKRSVESADAAFFASVANQQNMQVLITAQIADLYF 195 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + RI+IA++ + + K++ E++ + G S+L L + +A+ + S +P LE S Sbjct: 196 AYRTIEHRIAIANRNIQIQKRSYEITEKVYQAGQDSELDLQQAKAQYLATLSTVPLLELS 255 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + +S LL P ++ + +N+ P ++ IPA+L+ RPDIR ++ Sbjct: 256 LINTRNALSLLLARPPG-YIPELNAPNNSTLPTVHSIDLQDIPANLLIRRPDIRAAAWQV 314 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKG 338 A A+IGIA++D YPS+SL G+I+ + DNS G GP IFD G Sbjct: 315 ASQSAQIGIAEADYYPSISLIGNISWSGSTVDDAADNSLIG------IGPGFTWNIFDYG 368 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I NIR ++ Q+ +Q++VL A +EV++A +I + + + L AV ++ ++ Sbjct: 369 RIADNIRVQDARFQQLVERYQQSVLVAAREVDDAAVAIVKTAEKIDILSQAVHASERGLT 428 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ Y++G +LD +R+ + + ++ V LY A+G G+ Sbjct: 429 LANARYKEGYSGFQRVLDAQRSVFAQTEQAVVNQGNHIRAVVGLYKALGGGW 480 >gi|330964382|gb|EGH64642.1| outer membrane efflux protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 477 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 122/464 (26%), Positives = 216/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FSAVLSACQMVGPNYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + ++ +A +S A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRSRYQTSEAQAAGGFTSGAKIGAQRVQESGEAYLLTEKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VSNVGDVG-LTTAYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + L L ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELGIARESLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLPAGVS--SCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L + G ++ I + Sbjct: 308 AEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTVPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + +++ + Y+ Sbjct: 366 AEASAQASLARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAREAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A +A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTDVAMGQINLFLALGGGW 469 >gi|71909530|ref|YP_287117.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] gi|71849151|gb|AAZ48647.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] Length = 489 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 121/464 (26%), Positives = 215/464 (46%), Gaps = 31/464 (6%) Query: 14 LLAGCT----VGPEYTKPH--MP--LLPTQFSIGNSKNLINIDTLK----WWESFNDTSL 61 LL+ CT +GP+Y P MP L + + NS +D LK WW D +L Sbjct: 24 LLSACTGLPSLGPDYQAPAWTMPNRWLAAKPAATNSALKQGVD-LKIDSVWWRQLGDPAL 82 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---- 117 + L+ +A +L + A R+ A+ + V + FP AS N ST Sbjct: 83 DALIAVAQSGSLDLKAAQARLRQARASRAQVVSGYFPQVSASTGASRTKNATAVSTLPTR 142 Query: 118 ----GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 D+ W++DLFG RR +E++ A+L ++ A ++ ++++++++ +Y++ R ++ Sbjct: 143 TLYDAGFDASWELDLFGGTRRAVEAASADLAASEASLENVQVSLLAEVAQNYVEFRAYQS 202 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R+ IA L + +++ + G S + + + + + +P LE + Sbjct: 203 RLVIARANLASQTETAQITEWREQAGLASNADVEQARTSREQMRAGMPDLEVGLAAAENR 262 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++TLLG P + QS P + GIPAD++R RPD+ E+ LA A+ Sbjct: 263 LATLLGRQPGALHEQLLAAQSRPVAPPT---VATGIPADVLRQRPDLIVAERTLAAETAR 319 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNIRRA 347 IG ++ +PSLSL GS S S L +FD GK++S + Sbjct: 320 IGQRQAARFPSLSLGGSFGW-QAYSLGALGGSASLVRAASGTLAATLFDGGKLRSAVELQ 378 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + + ++ VL A++EVENALT+ + + V + A + + +LS Y G Sbjct: 379 TAVQEAALVAYESAVLTALEEVENALTAHAQARDRVVAREAAAFSARNAATLSRQMYEAG 438 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R E L+ A+ + + + LY A+G G++ Sbjct: 439 LADFQKVLETQRTQLTAEDSLATAQSAVLTTLIQLYKALGGGWS 482 >gi|254517039|ref|ZP_05129097.1| RND efflux system, outer membrane lipoprotein, NodT [gamma proteobacterium NOR5-3] gi|219674544|gb|EED30912.1| RND efflux system, outer membrane lipoprotein, NodT [gamma proteobacterium NOR5-3] Length = 520 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 137/480 (28%), Positives = 237/480 (49%), Gaps = 38/480 (7%) Query: 2 NILRA-IFSLFIVLLAGCT-VGPEYTKPH-------MPLLPTQFSIGNSKNLINIDTLKW 52 +ILR + +L L GCT +GP+Y +P P L Q N+ + + W Sbjct: 7 SILRTTVIALAGAALVGCTTLGPDYQEPEPSWLAQWQPDLYGQLDKTNADS--GAELAHW 64 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISH 106 W F+D +LN L++ L QNL + A I A+ + +A FP +S A I Sbjct: 65 WLRFDDPALNSLIQQVLGQNLGLQVAGLSILEARARLGGAQALRFPQSQQLGASAAYIRQ 124 Query: 107 R----FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESS-LANLDSAYAQVDIAKLNV 156 R +P N + G L + W++D +G+ R IES+ A L S Q D+ L + Sbjct: 125 RRSDGLLPASEDNFGSYDVG-LSAGWELDFWGRFARGIESADAAFLASVANQRDLQVL-L 182 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ Y R + RI+IA + + K++ +++ F G S+L L + + + Sbjct: 183 VAQTANIYYSYRTVQLRIAIAEKNAAIQKRSFDITRQLFDSGQQSELDLQQARTQYLATL 242 Query: 217 SDIPTLEKSFRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRN 274 + IP LE+S R+ + N ++ LL P L + + P + P+ + GIPA L+ Sbjct: 243 ATIPDLERS-RVQLRNALAVLLARPPGP-LRELGGEVEAL-PTME-PLALRGIPAQLVLR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLP 333 RPD+R + A+IG+AK++LYP+LSL GS D+ ++ GP + Sbjct: 299 RPDVRASAWQAGAQSAQIGVAKAELYPALSLFGSFGWNGDSLGVTRDGVTFAAGPAISWN 358 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+I+SN+R ++ Q+ + TVL A +E+++A ++ + + L + Sbjct: 359 IFDYGRIRSNVRVQDARLQQALTAFDATVLQAAREIDDAAVAVVKTAEAGDVLSESRTAA 418 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++++ L+ YR+G +LD +R+ A+ E +L A + ++ + LY A+G G+ P Sbjct: 419 ERALELANRRYREGYADFQRVLDAQRSLFAQAEKELVNAGAHI-QAVITLYQALGGGWQP 477 >gi|332883873|gb|EGK04153.1| hypothetical protein HMPREF9456_01181 [Dysgonomonas mossii DSM 22836] Length = 459 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 124/477 (25%), Positives = 224/477 (46%), Gaps = 46/477 (9%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MN L I + L + C +G +Y +P M + P F N N + W + D+ Sbjct: 1 MNKLTYILLISTALFSSCKIGRKYEQPEMNI-PQTFD-AKITNQGNASDIGWSALYQDSV 58 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRF 108 L L+ AL N +L A RI N A+LFP +Y S ++ Sbjct: 59 LQGLITKALDHNKDMLIAAARIKEMAANKRISFANLFPEIGAEVAGQKEYLNYGGDSKKY 118 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAK----LNVISKLIPS 163 P L+ N L+ W++D++G+ R E+ +A AY Q A+ L +++++ + Sbjct: 119 SPELRAN----LNVSWELDIWGKLRWANEAGVA----AYLQTVEAQRAMHLTIVAQVAQA 170 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + + + I Q LD ++ + + L++ G TS++ + E+ E+ IP LE Sbjct: 171 YFELKALDKELVIVKQTLDARREGVRFAKLRYEGGLTSEIPYRQSLVELARTETLIPNLE 230 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ +++ L+G + + ++ Q +PI++ P+ L++ RPD+ E+ Sbjct: 231 NEIKLKENDLFVLVGEFPIGNIPRGKDDISHLQVPASLPIDL--PSSLLKRRPDMIQAEQ 288 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPKLYLPI 334 KL ++ AK+G+A +D++PSL L G + G NT W L PI Sbjct: 289 KLIEANAKVGMAYTDMFPSLRLTGRLG--------GENTELTDFLKSPTWFISGVLTGPI 340 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ GK K+ A+++ +++ +++++VLN KEV N++ + N+ K++ + Sbjct: 341 FNMGKNKAKHNAAKATYEQEVYSYEKSVLNVFKEVNNSIITFNKMKEVYLSQEALYNSAN 400 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + Y G +D+LD +R E+ L+ A S V LY A+G G N Sbjct: 401 SYHELAKLQYVNGAVKYIDVLDAQRQLFDAEIALNNATLNELYSLVALYKALGGGLN 457 >gi|212690647|ref|ZP_03298775.1| hypothetical protein BACDOR_00134 [Bacteroides dorei DSM 17855] gi|237725159|ref|ZP_04555640.1| outer membrane efflux protein oprM [Bacteroides sp. D4] gi|212666747|gb|EEB27319.1| hypothetical protein BACDOR_00134 [Bacteroides dorei DSM 17855] gi|229436425|gb|EEO46502.1| outer membrane efflux protein oprM [Bacteroides dorei 5_1_36/D4] Length = 465 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/419 (25%), Positives = 208/419 (49%), Gaps = 27/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ S+ R+ Sbjct: 54 WWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPA--LSLDARWNRQ 111 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +TG ++ W++D+FG R+ +++ N ++ + + +++ Sbjct: 112 QTSGNTGTGQPQSRVGYYDATVNMSWQVDVFGSIRQRVKAQKENFAASREEYNATMVSLC 171 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +Y + R ++ +S+ + K ++++ +++ G SKL + + ++ S + Sbjct: 172 AEVASAYFNLREAQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAKSVYYSTLA 231 Query: 218 DIPTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 IP E ++ ++ LLG YP T L ++ P+ P+ +G+P L+ Sbjct: 232 SIPATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVGLPGQLLLR 286 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLY 331 RPD+R E+++ A +G +K+D PS LNGS +HD F ++ WS P + Sbjct: 287 RPDVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTKRSSMTWSIAPSMS 346 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 IF+ G+ +N+R + E + TVL A++EV+NA++S K + + + Sbjct: 347 WTIFNGGQRANNVRLQRAQLDETINQFNITVLTAVQEVDNAMSSYKNSIKQIVACREMLN 406 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K++ LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G+ Sbjct: 407 QGKEAFKLSLDLYKQGLSPFQNVLDAQRSLLSYENSLVQAQGYSLLCLIQMYQALGGGW 465 >gi|170694875|ref|ZP_02886025.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170140235|gb|EDT08413.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 557 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 217/477 (45%), Gaps = 57/477 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L C VGP+Y P L+P + S ++DT WW F+D L +V+ AL Sbjct: 79 LGACAVGPDYAAPTTQLVPFHNRVETSTQQAARPSPHLDT--WWTGFDDPMLVTVVQRAL 136 Query: 70 QQNLTILQATERINAAKENILSVRADLFP----------------SSYASISHRFIPNLK 113 QNL + A R+ A+ A L P S +I+ F P Sbjct: 137 AQNLDLAAAFARVQQARAVAAGAGAQLLPTLDFDATGTAEHQSLLSPVGTIAKTF-PGYS 195 Query: 114 TN----STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + G S W+IDL G RR ++ + +A A+ ++ V + +Y+ R Sbjct: 196 RDQREYNVGATAS-WEIDLAGGLRRSAAAARDEVQAAEAEQLGTRITVAADAADAYLQVR 254 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 F+ R+++A +D + +EL ++ GA + + + EA +K S +P L S Sbjct: 255 GFQTRLAVAQDQIDTDGRLLELVRVRRRAGAADEREIAQAEALLKQARSTVPILRTSLEA 314 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-----PADLIRNRPDIRYQEK 283 ++ + L+G + H + S IP I P D++R RPDI E+ Sbjct: 315 QLNRLDVLMGAQPGTYAHELSVSST-------IPAIPKIDDNDQPLDVLRRRPDIIAAER 367 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI--------- 334 ++A S +IG A S YP +SL+G++ F +T+ F + P+ Sbjct: 368 RVAASSERIGAAISGYYPKISLSGAL------GFDSVSTNHLFTAAAFQPVGTGALRWRL 421 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK+ + +++A + E +++ VL A ++VENA T++++ + +LQ V Sbjct: 422 FDFGKVDAEVKQARGANAEALALYRQAVLKAAEDVENAFTALSQTEARRQELQDEVASLT 481 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +LS YR G +L D+LD +R DL ++ A++ V + A+G G++ Sbjct: 482 RARNLSERAYRAGAITLTDVLDADRQLLVARDDLDSSRADAARAAVGAFRALGGGWD 538 >gi|294777942|ref|ZP_06743378.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] gi|294448206|gb|EFG16770.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] Length = 465 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 106/427 (24%), Positives = 208/427 (48%), Gaps = 24/427 (5%) Query: 42 KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY 101 + L+ +D WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ Sbjct: 45 QQLLPVDD-HWWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPALS 103 Query: 102 ASISHRFIPNLKTNSTGQ-----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQV 149 TGQ ++ W++D+FG R+ +++ N ++ + Sbjct: 104 LDAGWNRQQTSGNTGTGQPQSRVGYYDATVNMSWQVDVFGSIRQRVKAQKENFAASREEY 163 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + +++ +++ +Y + R ++ +S+ + K ++++ +++ G SKL + + + Sbjct: 164 NATMVSLCAEVASAYFNLREAQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAK 223 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIG 266 + S + IP E ++ ++ LLG YP T L ++ P+ P+ +G Sbjct: 224 SVYYSTLASIPATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVG 278 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH- 323 +P L+ RPD+R E+++ A +G +K+D PS LNGS +HD F ++ Sbjct: 279 LPGQLLLRRPDVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTRRSSMT 338 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS P + IF+ G+ +N+R + E + TVL A++EV+NA++S K + Sbjct: 339 WSIAPSMSWTIFNGGQRANNVRLQRAQLDETINQFNTTVLTAVQEVDNAMSSYKNSIKQI 398 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + + K++ LS+ Y+QG ++LD +R+ E L A+ + +Y Sbjct: 399 VACREMLNQGKEAFKLSLDLYKQGLSPFQNVLDAQRSLLSYENSLVQAQGYSLLCLIQMY 458 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 459 QALGGGW 465 >gi|319642386|ref|ZP_07997040.1| outer membrane efflux protein oprM [Bacteroides sp. 3_1_40A] gi|317386001|gb|EFV66926.1| outer membrane efflux protein oprM [Bacteroides sp. 3_1_40A] Length = 465 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 104/417 (24%), Positives = 203/417 (48%), Gaps = 23/417 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ Sbjct: 54 WWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPALSLDAGWNRQQT 113 Query: 112 LKTNSTGQ-----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 TGQ ++ W++D+FG R+ +++ N ++ + + +++ ++ Sbjct: 114 SGNTGTGQPQSRVGYYDATVNMSWQVDVFGSIRQRVKAQKENFAASREEYNATMVSLCAE 173 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y + R ++ +S+ + K ++++ +++ G SKL + + ++ S + I Sbjct: 174 VASAYFNLRETQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAKSVYYSTLASI 233 Query: 220 PTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 P E ++ ++ LLG YP T L ++ P+ P+ +G+P L+ RP Sbjct: 234 PATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVGLPGQLLLRRP 288 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLYLP 333 D+R E+++ A +G +K+D PS LNGS +HD F ++ WS P + Sbjct: 289 DVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTRRSSMTWSIAPSMSWT 348 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G+ +N+R + E + TVL A++EV+NA++S K + + + Sbjct: 349 IFNGGQRANNVRLQRAQLDETINQFNTTVLTAVQEVDNAMSSYKNSIKQIVACREMLNQG 408 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K++ LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G+ Sbjct: 409 KEAFKLSLDLYKQGLSPFQNVLDAQRSLLSYENSLVQAQGYSLLCLIQMYQALGGGW 465 >gi|148264704|ref|YP_001231410.1| RND efflux system outer membrane lipoprotein [Geobacter uraniireducens Rf4] gi|146398204|gb|ABQ26837.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter uraniireducens Rf4] Length = 496 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 128/470 (27%), Positives = 222/470 (47%), Gaps = 34/470 (7%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R +F L + L GC +GP+Y +P + + P F + ++T WW+ F D L+ Sbjct: 1 MRRLFMLALAASLTGCMMGPDYRRPVVDI-PQSFQYEDKDARDTVNT-PWWQQFQDPVLD 58 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQLD 121 L+ AL N ++ A I A + RA LFP SYA + R + +TN+T D Sbjct: 59 GLIAEALANNKSVKIAAANIEQAAGVLTQTRAPLFPQVSYAGSASRQRVS-ETNATPFPD 117 Query: 122 S--------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W++DL+G+ RR ES+ A++ ++ L++++ + Y+ Sbjct: 118 GVSNPFNSLQLFGGVTWELDLWGRVRRLSESARASMFASLEARRGVILSLVASVAGDYLQ 177 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R E++ IA + L Y ++++L L+F G S+L++ + + ++ S IP LE Sbjct: 178 LRGLDEQLVIAKRNLSAYAESVKLFELQFQYGQISQLNVEQARTQYETAASTIPQLESQI 237 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + +S LLG + ++ + G+P+ L+ RPDI E+ L Sbjct: 238 VQLENALSILLGRNPGPI-----ARGKTIYELVFPAVPAGLPSQLLERRPDIAQAEQNLI 292 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG AK+ +P++SL GS ++ F G + WSF PIF G I Sbjct: 293 AANALIGAAKALYFPTISLTGSYGYESEDLSKLFRGPSRAWSFAGSFTGPIFTAGAISGQ 352 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS---LS 400 + ++E+ I+++ + +A +VENAL I E K+ ++Q L K S L+ Sbjct: 353 VHQSEAGQDAALISYEAAIQSAFADVENALI-IRE--KLAGQIQAQERLVKASREYERLA 409 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G L +L ++ E+ L+ + + SY +LY A+G G+ Sbjct: 410 KLQYDGGYAPYLTVLSAQQQLFPAELTLAQLRASVFTSYANLYKAMGGGW 459 >gi|300697158|ref|YP_003747819.1| outer membrane lipoprotein, efflux system [Ralstonia solanacearum CFBP2957] gi|299073882|emb|CBJ53412.1| outer membrane lipoprotein, efflux system [Ralstonia solanacearum CFBP2957] Length = 486 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 223/464 (48%), Gaps = 32/464 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y KP P+ P +F ++ D WW F D L + V++ALQQN Sbjct: 18 GCAVGPDYVKPDAPV-PERFLGQAAVEQRTAHATADLSVWWAGFGDPQLTQFVQLALQQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNST------ 117 L + QA R+ A+ + + A L PS +Y S+ L + Sbjct: 77 LDLAQAFARVTQARAGLGAANAALLPSGNVTGQAARAYQSVETPLGRVLSSRPGFDRYGN 136 Query: 118 ---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +++ W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 137 AFEADVNASWELDVFGGLRRGREAALADYQASKAGAVATRLAVAAQTADIYIAVRGLQAR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + ++ + +L + G ++L + + E + + + IP LE ++ + Sbjct: 197 LKVARHQVQTQEELLSTVNLLYGNGLAAELQVRQAEGALAQVRASIPQLEVGLDAAMNAL 256 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + I G P +L+R RPD+ E++LA S A+I Sbjct: 257 DVMLGSLPGTHRAELAEGGDIPAAPQIAIS---GSPGELLRRRPDLIVAERRLAASNARI 313 Query: 293 GIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL+G + ++ + F + ++ L +FD G+I + I +A+ Sbjct: 314 GVAIAEYYPKFSLSGLLGSATSVGAGSLFGSGASQFAGVLGLRWRLFDFGRINAQIDQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ VL A ++VE+AL+++ + ++ T L V+ ++ + S Y++G Sbjct: 374 GQEAEMLAAYRLAVLRATEDVEDALSALVKREEQATVLTQGVDSLGRARNASFAAYQKGV 433 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SL+++L + + + + A+ + A++ V + A+G G+ P Sbjct: 434 VSLIEVLQADESLLRASDARAQAQTESARAAVAAFKALGGGWQP 477 >gi|21673389|ref|NP_661454.1| ABC-type export system, outer membrane channel protein [Chlorobium tepidum TLS] gi|21646487|gb|AAM71796.1| ABC-type export system, outer membrane channel protein [Chlorobium tepidum TLS] Length = 500 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 121/463 (26%), Positives = 218/463 (47%), Gaps = 37/463 (7%) Query: 16 AGCTVGPEYTKPHMPL--------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +GC GP++ KP P LP G + WW+SF T ++ +V+ Sbjct: 35 SGCAAGPDFVKPEAPAVKSYDQQPLPKPVDGGQRFDEGVGPAAYWWKSFGSTQIDSIVEE 94 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FIPNLKT 114 L N + A + A++EN+ + +P + A+ S I NL T Sbjct: 95 GLVGNPGLQAAEASLKASRENLRAGAGIFYPQASATFSQTRETSSPATTAGSGAIVNLST 154 Query: 115 NSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S + +DLFG QRR +E+ A +D AQ + + ++ + I ++E Sbjct: 155 LSA---SVSYALDLFGGQRRSVEALGAQVDVQRAQTLGVYMTLTGNIVNTSIAIAAYREE 211 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + Q++ L K + ++ ++ G S++ L ++I S+E+ +P + + H + Sbjct: 212 LDEYEQLIALEKDQLSIATKQYQAGVAPYSSVLALRSQIASLEASVPPVRQKLSQAEHLL 271 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TL G E++ + S P +P+++ P++L+R RPDI E +L + A+IG Sbjct: 272 ATLAGKTPGEWVRPDLRLSGISLPE-RVPLSL--PSELVRQRPDILAAEAELHAANAEIG 328 Query: 294 IAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +A + L+PS +L GS T H+ S P N WS G + PIF+ G +++ R A + Sbjct: 329 VATAALFPSFTLTGSYGRTASQPHELSDP-LNRFWSIGGNIAAPIFNGGSLRAKRRAAIA 387 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG-- 407 + + +++TVL A +V + + ++ D + + AVE K S+ L NY+ G Sbjct: 388 TRNQALALYRQTVLAAFAQVADLIRALEHDAQQAEAEKQAVESAKLSLDLVQANYKAGMV 447 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y + + DI+ AK+ A+ Q + +Y+A+G G+ Sbjct: 448 NYEQVILADIQYRQAKI--GYLQARAQQLQDTAAMYVALGGGW 488 >gi|298487739|ref|ZP_07005780.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157831|gb|EFH98910.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 477 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 127/464 (27%), Positives = 218/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP+Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + A+ A ++ A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTDKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL K+++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQKQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I + Sbjct: 308 AQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKQAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|313147141|ref|ZP_07809334.1| outer membrane efflux protein oprM [Bacteroides fragilis 3_1_12] gi|313135908|gb|EFR53268.1| outer membrane efflux protein oprM [Bacteroides fragilis 3_1_12] Length = 468 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/422 (24%), Positives = 208/422 (49%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN +IL A +RIN AK N+ R + FP+ ++ + Sbjct: 51 QWWKAFQDPVLDSLISVAVKQNYSILTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 108 Query: 111 NLKTNSTGQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T + L+ W++DLFG R +++ N ++ + +++ Sbjct: 109 QQSSGNTSELPQSTQHYYDASLNMSWELDLFGSIRNRVKAQKENFAASKEEYTGTMVSLC 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 169 AQVASAYINLRELQQELAVIQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 228 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + +S P+ PI +G+PADL+ RPD Sbjct: 229 SIPQIESGINQYITTLAILLGTYPQEIRPTL--ESPGILPDYMEPIGVGLPADLLLRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 287 IRSAERSVNAQAALVGASKSDWLPQIFLKGSLGYAAKDLKDLTHHKSM-----TYEIAPA 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL A++E +NA+ + K + L+ Sbjct: 342 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREV 401 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 402 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 461 Query: 450 YN 451 ++ Sbjct: 462 WS 463 >gi|330826934|ref|YP_004390237.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329312306|gb|AEB86721.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 484 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 115/455 (25%), Positives = 213/455 (46%), Gaps = 25/455 (5%) Query: 17 GCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GCT + P Y P +P+ + + N D + W + F D +L +++ AL N + Sbjct: 25 GCTSLAPPYEAPALPVPAHYAGVAEAGNAQAAD-MAWRDYFTDPALQAVIEQALANNRDL 83 Query: 76 LQATERINAAKENILSVRADLFPSSYAS--------------ISHRFIPNLKTNSTGQLD 121 +AT R+ A+ RA+ PS AS ++ L + S Sbjct: 84 RRATLRVAEARAAYGIQRAEELPSVGASAGLMRIGLPDNLTSLASSLPATLTSYSAFAGI 143 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 S W++DL+G+ R++ E++L +A A ++++++ +++ R ER+++A Q Sbjct: 144 SSWELDLWGRVRNLSEAALHQYFAAEWTQRGAAVSLVAQTANAWLALRETDERLALARQA 203 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 LD +++ + + GATS+L L ++ + S + LE+ H + ++G P Sbjct: 204 LDNRAESLRIFSRRMEVGATSRLDLTQVRMLHQQARSLVAQLEQQRATQQHALDLIVGAP 263 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 ++ +P + G+P+DL+ RPDI+ E++L + A+IG+A++ Sbjct: 264 TPVAAGARLPATDALRP-----LPAGLPSDLLTRRPDIQAAEQQLRAAHAQIGVARAAFL 318 Query: 301 PSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL GS + + F W F P + +P+F GK+++N+ AE + Sbjct: 319 PSISLTAMAGSASGELSDLFGSGTGAWLFRPAISVPLFTAGKLQNNLNLAEVRRDAAVVQ 378 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + A ++V +AL + + V L + + LS + Y G L++LD Sbjct: 379 YEQAIQGAFRDVSDALATQAGLTQQVQVLDDMLATQVERARLSRLRYDNGAARFLEVLDA 438 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ER L+ +R L S V LY A+G G +P Sbjct: 439 ERDLLATAQQLTQTRRALLSSRVALYAALGGGADP 473 >gi|251790894|ref|YP_003005615.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya zeae Ech1591] gi|247539515|gb|ACT08136.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya zeae Ech1591] Length = 492 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 228/470 (48%), Gaps = 38/470 (8%) Query: 14 LLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+YT+P + + Q ++ + L WWE F D L + + ALQ Sbjct: 15 LLAGCAVGPDYTRPAVSMQEKYLGQEAVNQRHAATRAELLTWWEGFGDPQLTRFITQALQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASIS-------------HRF 108 QNL++ QA+ R+ A+ + + A L PS +Y S+ R+ Sbjct: 75 QNLSLAQASARVVQARAGLGAANAALLPSGNISGQAGRAYQSVETPLGKVLSSAPGFDRY 134 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + +T+ L + W++D+FG RR E++LA ++ A V +L V ++ YI Sbjct: 135 GNSYETD----LGASWELDVFGGLRRGREAALAEYQASEAGVAATRLAVAAQTADIYITI 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R+++A + + + + + + +G ++L + ++E + +++ +P L+ + Sbjct: 191 RGLQARLNVARRQVQTQQDLLATINRLYDKGLAAELQVRQVEGALAQVQASVPVLQTALD 250 Query: 228 MNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + +LG P T + + P G P +L+R RPD+ E++LA Sbjct: 251 TAMNALDVMLGAAPGTNRAVLAE---TSAIPAAPQIAATGTPGELLRRRPDLIVAERRLA 307 Query: 287 DSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 S A+IG+A ++ YP SL+G + ++ N F + S L +FD G+I + Sbjct: 308 ASNARIGVAVAEYYPKFSLSGLLGSATTVSSGNLFSNGASQSSGVIGLRWRLFDFGRINA 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I +A+ E ++ +VL A ++VENA +++ +++ L V+ ++ + Sbjct: 368 QINQAKGQEAEMLAAYRLSVLQATEDVENAFSALVNNEEQARVLTQGVDSLSRARDAAFA 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y+ G SL+++L + + + A+ + A++ V + A+G G+ P Sbjct: 428 AYQHGTLSLIEVLQADESLLRASDARLQAQAESARAAVAAFKALGGGWQP 477 >gi|172065546|ref|YP_001816258.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997788|gb|ACB68705.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 558 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 125/511 (24%), Positives = 225/511 (44%), Gaps = 80/511 (15%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----------------KWWESFN 57 + GCTVGP++ PH + + S + + +WW +F Sbjct: 29 ITGCTVGPDFKPPHADVPANWHDLQASAAAASPASAAGAHAPSSPTTRADPDPRWWRAFG 88 Query: 58 DTSLNKLVKIALQQNLTILQATERI--------------------NAA------------ 85 D L++LV+ A + NL + A RI NA+ Sbjct: 89 DPLLDRLVERAARDNLDVQAAVLRIAQARAQVRAAAAQGLPNVRANASYQREQLGLKGII 148 Query: 86 KENILSVRADLF-----------PSSYASI---SHRFIPNLKTNST---GQLDSDWKIDL 128 +E + R D P + AS+ +H I +L+ D+ W++DL Sbjct: 149 EEQGIDQRVDRLGAPGSPLDRFGPGTGASVQQGAHAAIDSLEAPVNVWQAGFDASWELDL 208 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ RR +E++ A +A A D A L++ +++ +Y+ R + + ++A + + Sbjct: 209 FGRVRRSVEAAGAQASAAVASRDDALLSLQAEVAQTYLQLRGAEAQRALADDLQRAQRDL 268 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 ++L+ + G S L + +A + I + +P ++ + + ++ L+G + Sbjct: 269 LDLTREQAAHGLASDLDVRSADARLAQIRAQLPQFDQQIVLLRNGLAYLVGGAPGALDDW 328 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 + + P + + +G+P+ L R RPDIR E +L + A +G+A + YP +SL G Sbjct: 329 LD--APRALPGVPPTVPVGLPSTLARRRPDIRRAEAELHAATADVGVAVAQFYPDISLTG 386 Query: 308 SIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 + L H HWS FGP + LPIF G++ SN+R +++ E + ++ Sbjct: 387 QVGLRAAHVREL----AHWSHLFYSFGPAVSLPIFSGGQLVSNLRLSQARQAEAALAYRR 442 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 VL A+++V+NAL D+ L AV+ + ++ L+ YR+G LD+LD ER Sbjct: 443 AVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGALELARDRYRKGLSPFLDVLDAERQ 502 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Q V LY A+G G+ Sbjct: 503 WSEGRQQAVQGALQTTTDLVALYKALGGGWQ 533 >gi|294146580|ref|YP_003559246.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292676997|dbj|BAI98514.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 469 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 125/454 (27%), Positives = 226/454 (49%), Gaps = 19/454 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQN 72 L C GP+Y P P IG + +++ WW ++D L+ LV+ AL+ N Sbjct: 16 LTACAAGPDYKAPATPTAAAGAFIGAASPAVSVAQADDHWWRLYSDPVLDGLVQDALKAN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPNL-KTNST--GQLD 121 I A R+ A+ + R+D P + S S + +P + N T L+ Sbjct: 76 TDIRVAVARLEKARAQLRGARSDRLPQTTLSGSPSYGRASAAQSLPGADRENWTIDAGLN 135 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++DLFG+ +R IE++ ++++A A D ++ V++ + +Y+DA ER+++A Q Sbjct: 136 VAYEVDLFGRVKRSIEAAKGDVNAASADADAVRVAVVADTVRAYVDATSSAERLAVARQT 195 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + L +I +++ +F G + +L ++++ A S + IP+L + ++TL G Sbjct: 196 VALLDNSIRITNARFEVGRSDRLDVIRVTALRDSQAAVIPSLVADRDGALFRLATLTGRT 255 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + +++++ P L PI +G L+ RPD+R E++LA A+IG+A +DLY Sbjct: 256 PRDLPGTVRERT--VTPGLSQPIPVGDGRALLARRPDVRAAEQRLAADTARIGVATADLY 313 Query: 301 PSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P ++L GSI T + W GP + ++ ++ I A + A + Sbjct: 314 PRITLGGSIGTTAIGGGDIFGGGPFRWLLGPLINWAFPNQEANRARIAAARADADGSLAS 373 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + TVL A++E E AL+ + L+ A E ++ +S+ R+G+ L +LD Sbjct: 374 FDGTVLRALEETETALSVYAHALERRDTLKAAREAADRAARISLARQREGQIDFLTVLDA 433 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R A E DL+ A R +A + VDL+ A+G G+ Sbjct: 434 QRTLAAAESDLATANRAVAFAQVDLFRALGGGWT 467 >gi|331015889|gb|EGH95945.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 477 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 122/471 (25%), Positives = 220/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFSAVLSACQMVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + ++ +A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRSRYQTSEAQAAGGFTNGAKIGAQRVQESGEAY 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTEKVPVSNVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + L L ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELGIARESLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGVS--TCNELPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L + G Sbjct: 301 RHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTLPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + +++ Sbjct: 360 -RARIHQAEASAQASLARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAREAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A ++A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTEVAMGQINLFLALGGGW 469 >gi|113869666|ref|YP_728155.1| outer membrane efflux protein [Ralstonia eutropha H16] gi|113528442|emb|CAJ94787.1| outer membrane efflux protein [Ralstonia eutropha H16] Length = 495 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 128/465 (27%), Positives = 211/465 (45%), Gaps = 33/465 (7%) Query: 14 LLAGCTVGPEYTKP------HMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLN 62 +L GCT+ P Y +P P+ P ++ G ++ ++I W E F D L Sbjct: 14 VLTGCTLAPHYDRPAPPVADSFPVAPEGYATAEAKSGETRRAVDI---GWREFFRDPRLQ 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNST--GQ 119 L+ +L N + A RI A+ RADL P+ A+ ++ R N ST GQ Sbjct: 71 SLIATSLDNNRDLRTAALRIEEARALYQVQRADLLPTVNANAAYTRASTNAAGTSTVLGQ 130 Query: 120 LD-----------SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 S +++D FG+ R + ++LA S A ++++S++ +Y+ Sbjct: 131 PGVTQVYQANLGISSYELDFFGRVRSLSNAALAQYFSTEEAHRSAYISLVSEVAKAYLSE 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R F E+ IA L + L+ +F GATS L L E+ + L + Sbjct: 191 RSFAEQYEIARDTLKARESTYGLAKQRFDVGATSALDLRDNESLVAQARVAAAQLARQRA 250 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G P + + + + + I G+P+DL+ RPDIR E++L Sbjct: 251 QAQNALEVLVGKPIGSIGNLPEPMRLSDE-RIISDIPAGLPSDLLEQRPDIRQAEQQLLS 309 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +P ++L G+I+ T N F WSF P+L LPIFD G+ KSN+ Sbjct: 310 ANANIGAARAAFFPRITLTTSVGTISPTFSNLFDAGTKAWSFAPQLTLPIFDYGRNKSNL 369 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A Q +++T+ A EV +AL + + V+ + L+ + + Sbjct: 370 DLANVRKNIQIANYEKTIQTAFAEVADALVARGTLEDQVSGQEEVRNAEAARYELARLRF 429 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 R G S LD LD +R E L A++ + +DLY ++G G Sbjct: 430 RSGVASYLDELDAQRQLFTAEQALIQARQLRLNNAIDLYRSLGGG 474 >gi|255009384|ref|ZP_05281510.1| outer membrane efflux protein oprM precursor [Bacteroides fragilis 3_1_12] Length = 460 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 102/422 (24%), Positives = 208/422 (49%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN +IL A +RIN AK N+ R + FP+ ++ + Sbjct: 43 QWWKAFQDPVLDSLISVAVKQNYSILTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 100 Query: 111 NLKTNSTGQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T + L+ W++DLFG R +++ N ++ + +++ Sbjct: 101 QQSSGNTSELPQSTQHYYDASLNMSWELDLFGSIRNRVKAQKENFAASKEEYTGTMVSLC 160 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 161 AQVASAYINLRELQQELAVIQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 220 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + +S P+ PI +G+PADL+ RPD Sbjct: 221 SIPQIESGINQYITTLAILLGTYPQEIRPTL--ESPGILPDYMEPIGVGLPADLLLRRPD 278 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 279 IRSAERSVNAQAALVGASKSDWLPQIFLKGSLGYAAKDLKDLTHHKSM-----TYEIAPA 333 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL A++E +NA+ + K + L+ Sbjct: 334 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREV 393 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 394 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 453 Query: 450 YN 451 ++ Sbjct: 454 WS 455 >gi|320323971|gb|EFW80055.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. B076] Length = 477 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 220/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQVVGPDYQPPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVH 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + S N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAQANTQVAMGQINLFLALGGGW 469 >gi|213968936|ref|ZP_03397076.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] gi|301382828|ref|ZP_07231246.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302062984|ref|ZP_07254525.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302134603|ref|ZP_07260593.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926235|gb|EEB59790.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] Length = 477 Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 125/471 (26%), Positives = 219/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFSAVLSACQMVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + ++ +A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRSRYQTSEAQAAGGFTNGAKIGAQRVQESGEAY 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTEKVPVSNVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + L L ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELGIARESLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P E L N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKP-VEQLPVGVSTCNEL-PHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L + G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTLPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQASLARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A ++A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTEVAMGQINLFLALGGGW 469 >gi|70730229|ref|YP_259968.1| RND efflux transporter, outer membrane protein [Pseudomonas fluorescens Pf-5] gi|68344528|gb|AAY92134.1| RND efflux transporter, outer membrane protein [Pseudomonas fluorescens Pf-5] Length = 497 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 224/466 (48%), Gaps = 43/466 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-IDTLK---WWESFNDTSLNKLVKIALQQ 71 + C +GP+Y +P + P + N D L WWE + D LN L++ Sbjct: 36 SACAIGPDYQRPQVAE-PVHYKEAEGWRQANPSDALARGAWWELYGDAQLNGLIEKLNSS 94 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISH---------------RFIPNLKTNS 116 N ++ QA + A+ + S R FPS S ++ Sbjct: 95 NQSVAQAEAQFRQARALVRSSRGSFFPSVDLSAGKTRASQGTGSSSSALSSSSSGIRDTY 154 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 QL W+ D++G+ RR +E++ A+ ++++A + +L+ S+L +Y+ R E+ Sbjct: 155 NTQLGVSWEADVWGKLRRDLEANEASAEASFADLAAMRLSQQSELAQNYLQLRVIDEQKR 214 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + Y++++ ++ ++ G + K ++ + + ++KS ++D+ L + I+ Sbjct: 215 LLEATVAAYQRSLTMTQNQYQAGVSGKDAVAQAQTQLKSTQADLIDLIWQRAQFENAIAV 274 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G P EF N + IP+ +G+P+ L+ RPDI E+ + + AK Sbjct: 275 LIGVPPAEF---------NLAESKTIPVLPQVPLGVPSQLLERRPDIASAERSVIAANAK 325 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+ YP L+L+ G + T+ + N WS GPKL + +FD G+ + + R E Sbjct: 326 IGVAKAAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTE 385 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + + +++TVL+ +EVEN + + ED+ V Q A++ ++++ L+ Y+ Sbjct: 386 AVYDQTVAKYRQTVLDGFREVENYMVQLKVMEDEAGVR--QQALDSAREALRLTENQYKA 443 Query: 407 GRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD++ + E LS+ + +L S V L A+G G++ Sbjct: 444 GLIAYLDVVTSQTTALSNERSVLSLLQSRLIAS-VQLIAAMGGGWD 488 >gi|317405605|gb|EFV85906.1| outer membrane efflux protein [Achromobacter xylosoxidans C54] Length = 485 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 118/461 (25%), Positives = 218/461 (47%), Gaps = 25/461 (5%) Query: 9 SLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESFNDTSLNKLV 65 +L ++L GC ++ P+Y +P P+ + + L + + W F D L L+ Sbjct: 1 ALAVLLAQGCVSMAPQYVRPTAPVAAAYPGQAAAPDASLPSAARVDWRGYFTDPVLQGLI 60 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLD-- 121 AL N + A R+ A+ RAD FP+ + A S P N TGQ Sbjct: 61 GDALAHNRDLRTALLRVEEARALYGIQRADQFPTIGAQADGSRGRTPG-DLNLTGQPQVA 119 Query: 122 ---------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + W++D +G+ R + +++L N ++ A + A L++I+++ SY+ R Sbjct: 120 SQYQVGVGMAAWELDFWGRVRSLKDAALENYLASDAAAEAATLSLIAQVADSYLTLRELD 179 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER+++ + ++++ + ++ G+ SKL L ++E + + LE++ H Sbjct: 180 ERLALTRATIASREESLRIFRRRYEVGSISKLDLTQVETLWQQARALGADLEQARATQAH 239 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L G P + L ++ +L G+P+DL+ NRPDI E +L + A Sbjct: 240 ALELLTGQPLAQPLPRTGLDDDSVMRDL----PAGLPSDLLTNRPDIVAAEHQLRAANAN 295 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P ++L G+ D F G + W+F P + LPIFD G+ +N+ AE Sbjct: 296 IGAARAAFFPRITLTGAFGSASAELDGLFGGGSRAWNFAPSINLPIFDAGRRGANLDLAE 355 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++++ + A K+V +AL++ + V L+ V+ + L+ + Y G Sbjct: 356 VRRDQAVVSYERAIQGAFKDVADALSARRWLAEQVQVLRATVDAQSERARLAKLRYDHGA 415 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R + L+ +R L + V LY A+G G Sbjct: 416 SPYLEVLDAQRDLLAAQQTLAQTRRALLSARVGLYAALGGG 456 >gi|149189966|ref|ZP_01868245.1| putative outer membrane protein [Vibrio shilonii AK1] gi|148836281|gb|EDL53239.1| putative outer membrane protein [Vibrio shilonii AK1] Length = 540 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 124/483 (25%), Positives = 237/483 (49%), Gaps = 44/483 (9%) Query: 9 SLFIVL----LAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 S FI L + CT +GP++T LP+ ++ +++ ++ T+KWWE FND +LNK Sbjct: 8 SCFIALATLSMTACTTLGPDFTPSQETQLPSSWNDSDTQASMD-STVKWWEQFNDPTLNK 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-----NSTG 118 LV IA QQNL + A RI A+ ++L + L SIS N+T Sbjct: 67 LVDIASQQNLDVEAAGFRILQAR-SVLGIADGLQYPQLQSISGNLAKAYANESSFNNATL 125 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 D+ W++D++G+ R IES+ A ++ A + + + S++ +YI+ R F+ERI ++ Sbjct: 126 SFDAGWEMDVWGKYARGIESAQAGYYASIASYNDILVTITSEVARNYINYRTFQERILLS 185 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + +++ ++ + ++ ++F G ++L + + ++ + ++ +P L + ++++ LL Sbjct: 186 QRNIEIQERVVNITRVQFESGNVTELDVQQARNQLFTTKAALPGLTVAMLQAKNSLAVLL 245 Query: 238 GYPATE------------FLHYMQ-------------KQSNNFQPNLYIPINIGIPADLI 272 G E + + Q K + P + N+ + A L+ Sbjct: 246 GTLPEEIEPILKSDMEQKLVQFEQRFKASGSKSAISEKGDGSIVPETPVLTNL-VDASLV 304 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---YNTHWSF--G 327 RPD++ E + A+IG+A++ LYPS SL GSI + +N + G Sbjct: 305 MRRPDLQVAELQAHAQSAQIGVAETALYPSFSLFGSIGINSSVPSGSSFSFNDSLTLVAG 364 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + IF G++K+NIR ++ QE + + VL A++EV NA+ + + ++ + Sbjct: 365 PAMSWNIFQYGRVKNNIRFEDAKFQETLTNYNKKVLQAVQEVTNAMEAYDLYREQKSLRL 424 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V ++ ++S+ Y G+ S +L+ + E + K +A V LY ++G Sbjct: 425 ESVNASVRAFNISLTQYENGQISFERLLNSVEKMTRSEDSYAQIKGNVANQVVALYKSLG 484 Query: 448 SGY 450 G+ Sbjct: 485 GGW 487 >gi|332880523|ref|ZP_08448197.1| RND transporter, HAE1 family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681511|gb|EGJ54434.1| RND transporter, HAE1 family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 1489 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 118/456 (25%), Positives = 231/456 (50%), Gaps = 36/456 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ C +G YT+P MPL P + +++ +I L WWE +NDT+L +L+ AL N Sbjct: 1049 LSSCQIGKSYTRPDMPL-PVRLDT-LTQDTASIGDLSWWELYNDTTLQQLIHRALTYNKD 1106 Query: 75 ILQATERIN--AAKENILSVRADLFPSSYASISHRFIPNLKTNSTG--QLDSD------- 123 + A+ R+N AA + I A++FP + A R N +T + G + D+D Sbjct: 1107 LKIASARMNELAALKRI--DFANMFPQATA----RLNGNRETTNYGGDKFDADPELSLTA 1160 Query: 124 ---WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DL+G R + S A ++ K+ +++++ SY + ++I + Sbjct: 1161 SISWELDLWGNLRWARDHSTAEFLASVENCRAVKMGLVAQVAQSYFELMALDNELTIVRR 1220 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L+ ++ + L+ ++F G TS++ + + E+ + +P LE+ + I+ L G Sbjct: 1221 TLEARREGVRLAEIRFKGGLTSEIVFQQAKVELAKTATMVPDLERRISLKESEIALLTG- 1279 Query: 240 PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 +F + + + N + +P + +G+P+ L+ RPDIR E++L + A++G+A + Sbjct: 1280 ---DFPYAVNR--NVLPEEIQLPDALPLGLPSTLLERRPDIRKAERELIAAHAEVGLAYT 1334 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +++P L+L ++ + + +S+ L P+F GK ++ ++ ++ + Sbjct: 1335 NMFPRLALTATLGAESETLRDLLKSPYSYLAGNLLSPLFAMGKNRAALKAKRAAYEGAVA 1394 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++TVL A KE NA+ + N+ K I + E + ++ L+ + Y G LD+LD Sbjct: 1395 EYEKTVLTAFKETHNAIINFNKIKDIYESRRQLAEASRTAVELAQLQYINGVIGYLDLLD 1454 Query: 417 IERATAKVEVDLS--IAKRQLAKSYVDLYIAIGSGY 450 +R +V LS + +QL ++LY A+G G+ Sbjct: 1455 AQRNYFDAQVSLSNAVCDKQLM--IINLYKALGGGW 1488 >gi|206562787|ref|YP_002233550.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198038827|emb|CAR54789.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 495 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 223/480 (46%), Gaps = 48/480 (10%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVK 66 LLAGCTVGP+Y P P PT +DT WW + ND L++L+ Sbjct: 19 CLLAGCTVGPDYRGAPAAPDAPTFVR----APATGVDTAAPAPSAWWHALNDRQLDELII 74 Query: 67 IAL---------------------QQNLTILQATERINAA---KENILSVRADLFPSSYA 102 AL QQ + + AA +E + L PS+ + Sbjct: 75 AALVYSPDLHAAQARLRAARAQLSQQRAAQMPKSSATVAAIRMREPDVGAAGSLLPSNGS 134 Query: 103 SISHRFIPNLKTNSTGQL-----DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 S P+L + QL D+ W+IDLFG RR +E++ A + A + ++++ Sbjct: 135 GQSGGASPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAAAVDADLADTQVSI 194 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+D R ++R++++ + L ++ ++L+ + +G + + +L ++++ Sbjct: 195 AAEVANAYVDLRDQQQRLALSRRTAQLQQQMLDLTQQRRARGVAADTDIERLTTQVENTR 254 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + L+ ++ ++ L G A L ++ P L + IG PA L++ RP Sbjct: 255 ASLIPLDAQVTESLDRLAILTGR-APGALDAALSTADAALPTLPASVAIGDPATLLKQRP 313 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLY 331 DIR E++LA S A+IG +D +P ++L G + + + PG+ N W P L Sbjct: 314 DIRAAERRLASSNAQIGEHVADYFPKVTLLGDLGFSATD--PGHLFRKQNFTWVGAPYLQ 371 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 I D G+ + +R AE+S E +Q+ VL A+++ AL ++ V L Sbjct: 372 WNILDFGRTRGAVRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVVALTKVQT 431 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ + +L K+YV + ++G G+ Sbjct: 432 SAVHSRTLMDQRYRAGVASMIDLLDTQREALSAQQNVIAGQAELIKNYVSVQKSLGLGWQ 491 >gi|332524604|ref|ZP_08400807.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] gi|332107916|gb|EGJ09140.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] Length = 477 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 121/453 (26%), Positives = 219/453 (48%), Gaps = 22/453 (4%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLKWWESFNDTSLNKLVKIAL 69 +LAGC T+ P+Y +P P+ G + + L W + F D L +LV IAL Sbjct: 16 AVLAGCGTLAPDYQRPAAPVAGAFPEAGGTTAPGAVAAADLPWQQFFRDERLKRLVGIAL 75 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLD---SDWK 125 N + A I A+ RADLFP+ +S +R + NST Q S ++ Sbjct: 76 ANNRDLRVAVLNIEQARAQYGVQRADLFPTLGVGVSGNRVSTDSGINSTYQAGLAVSSYE 135 Query: 126 IDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DLFG+ R + ++LA+ + ++ +I+ + Y+ + E + + + L Sbjct: 136 LDLFGRVRSLNNAALASYLATEEARKAVQIGLIASVANGYLALQADDELLRVTRETLATR 195 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++++L+ L+F GA+S+L L + ++ ++ + L + + + + LLG P Sbjct: 196 AESLKLTQLRFDVGASSQLDLRQAQSLYEAARATHAQLLRQRAQDENALVLLLGQPLPGD 255 Query: 245 LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L S +P + G+P+ ++ RPD+ E++L + A+IG A++ +P + Sbjct: 256 LPAALPLSEQ----AALPELPAGLPSQVLTRRPDVLQAEQQLIAANARIGAARAAFFPQI 311 Query: 304 SLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L GS + F G +T W+F P+L +PIFD G+ ++N+ A + + + Sbjct: 312 TLTATAGSASSELSGLFKGGSTGWTFAPQLLMPIFDAGRNRANLDSANAGRDIAVAQYDK 371 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER- 419 V A +EV +AL + + LQ V+ + + L+ + YR G S LD+LD +R Sbjct: 372 AVQAAFREVADALAGRATLGEQLAALQAQVKAEQGRVELAELRYRNGAASYLDLLDAQRS 431 Query: 420 --ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A + EV + + A++ V LY +G G+ Sbjct: 432 LFAAQQSEVQVRALQ---AQNLVTLYRVLGGGW 461 >gi|94309292|ref|YP_582502.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93353144|gb|ABF07233.1| RND efflux system, outer membrane lipoprotein, NodT family [Cupriavidus metallidurans CH34] Length = 488 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 228/484 (47%), Gaps = 44/484 (9%) Query: 4 LRAIFSLFIVL----LAGCTVGPEYTKPHMPL--------LPTQFSIGN--SKNLINIDT 49 +RAI +L + LAGC VGP++ P P P + + S++L+ D Sbjct: 1 MRAIPTLLMCAAAMSLAGCAVGPDFRTPDAPADARYTSGPQPERLDAKDYPSQSLVEGDV 60 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASI-SH 106 +WW F + L++ +++AL + T+ QA ++ A+EN+ + A FP A+ + Sbjct: 61 PAQWWTLFRNPQLDETIRVALANSPTLTQAQAKLREAQENLAARTGATRFPQVDANFNAT 120 Query: 107 RFIPNLKTNSTGQLDS-------------DWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 R NL++ Q S + +DLFG QRR +E A +D + + A Sbjct: 121 RQQVNLQSVGITQFPSPGPFTLYNASVQVSYALDLFGGQRRELEGLQAAVDYQRYEFEAA 180 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L++ + + + I + +++ + D K+ + + + QG +++ + + +AE+ Sbjct: 181 RLSLAANVATAAIREAGLRAQLADTVALADAQKRQLAIMQQRLGQGGVARVDVQRQQAEL 240 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 ++ IP L + H ++ G PA L + + ++ +P + + +P+ Sbjct: 241 AQTQALIPGLSQQIDATRHQLAVYTGQTPAAAQLPEFRLE------DMQLPETLPVSLPS 294 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSF 326 +L R RPDIR E L + A IG+A ++LYP ++L G+ A+ + F +N WS Sbjct: 295 ELARRRPDIRAAEALLHQASADIGVATANLYPQITLTASGGTQAMRMSDLFNSFNV-WSL 353 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + P+F G++++ R E++ + +++ VL ++ V + L +++ D + Sbjct: 354 AAGVVQPVFHGGELRAQKRAKEAAYEASLGAYRQAVLQGLQNVADTLRALDADAGTLQAR 413 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + + ++++ YR G S +LD ER + +DL+ A+ L A+ Sbjct: 414 ADNAKQTRDTLAIVNEQYRLGGVSQFAVLDAERQARQAALDLAQARATRLADSAALMQAL 473 Query: 447 GSGY 450 G G+ Sbjct: 474 GGGW 477 >gi|146282477|ref|YP_001172630.1| outer membrane efflux protein [Pseudomonas stutzeri A1501] gi|145570682|gb|ABP79788.1| outer membrane efflux protein [Pseudomonas stutzeri A1501] Length = 484 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 125/473 (26%), Positives = 234/473 (49%), Gaps = 37/473 (7%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------WWESFNDTS 60 L + LLA C+ VGP+Y P ++ + L N + + WW+ ++D Sbjct: 9 LPLLVTLLAACSAVGPDYRVPDQAVVRQAAAQAPFDTLGNPEVEQTPLPDGWWQLYDDPL 68 Query: 61 LNKLVKIALQQNLTILQATERINAA----------KENILS-----VRADLFPSSYASIS 105 L++LV+ AL N I QA + A +E ++ R L SS A Sbjct: 69 LDRLVREALAGNRDIRQAHHNLRQAYQGFQMAHHAQEVVVGGDGSLARGQL--SSEALAL 126 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +P + G L +++DLFG+ RR E++ A DS+ + ++ A+++ ++ ++ SY Sbjct: 127 EEKLPVMNLADAG-LAVSYQLDLFGRLRRGAEAAGATADSSASLLEAARISAVAGVVRSY 185 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + A H E ++IA L + ++ +E++ G +++ + + A+++++ +++P E Sbjct: 186 MTACHAGEELAIAEHSLAIQQRQLEVASRLLAGGRGNEVDVARARAQVETLRAELPPFEA 245 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ ++ LLG+ E + N P L PI +G A L+R RPDIR E+ Sbjct: 246 KKAAALYRLAALLGHTPGELPE--AAAACNHAPQLSQPIPLGDGAALLRRRPDIRAAERS 303 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKL--YLPI-FDKGK 339 LA + A+IG+A + +YP +SL G+ T ++ W+FGP + ++P D+ + Sbjct: 304 LAAATAQIGVATAMMYPQISLGGTAGYTGMLEHLGDAVTQRWAFGPSISWHVPTQVDRAR 363 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ E+ A + VL A++E + L+ D + L A + + + Sbjct: 364 VRAM----EAGADAALARFDGVVLEALRETQTLLSRYAHDLQRDQALHEARDAARNAADH 419 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y++GR LD LD ER A + L+ ++ QL++ VDL++A+G G+ P Sbjct: 420 TRRLYQEGRLGYLDSLDAERTLATAQAALAASQAQLSQDQVDLFLALGGGWRP 472 >gi|330809458|ref|YP_004353920.1| outer membrane protein precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377566|gb|AEA68916.1| putative outer membrane protein precursor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 425 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 110/424 (25%), Positives = 204/424 (48%), Gaps = 28/424 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--- 107 +WW FND L L AL NL + A ERI ++ + + L PS A+ S+ Sbjct: 4 QWWTLFNDAVLTGLQARALAGNLDLQMAAERIEQSRAQLGIAASQLLPSVGANASYTREA 63 Query: 108 FIPNLKTNSTGQ-----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 N K + G D+ W+IDL+G+ +R E + A L++ + A++ Sbjct: 64 LSENGKFAALGAPTGPNNFWQLGFDASWEIDLWGRAQRAREGAAATLEATVYDREAAQVA 123 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ +Y+ R + ++ I Q L + ++ + L+ + G ++ A++ +I Sbjct: 124 LAAEVARTYLQLRGTQAQLDITRQNLTVAERTLGLAESRERNGVGTRFETSSARAQLATI 183 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 ++ +P L++ ++ ++ L+G E + Q P +P + +G+P++L Sbjct: 184 KAMVPELDQRRNAQMNALALLMG----EQPRALDGQLGKALPLPALPSGVPVGVPSELAH 239 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-----SFGP 328 RPDI E +L + A IG+AK+D YP + L G I + +S G W S GP Sbjct: 240 RRPDILRAEAQLHAATAAIGVAKADFYPRIGLKGQIGVEAFDS--GDLASWDSRFFSIGP 297 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +YLPIF G++ + ES + + +++TVL A EV+NAL + ++ +L Sbjct: 298 TVYLPIFQGGRLMQRLALNESRQKTAALAYRQTVLRAWHEVDNALDAWGAQQRQHDELLM 357 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + E +K+++ + Y+QG L +L + + L+ + V+LY ++G Sbjct: 358 SYEQNKQALHAAERGYQQGAADYLSVLTAQSNLLASQTRLNANATDATLTVVNLYKSLGG 417 Query: 449 GYNP 452 G+NP Sbjct: 418 GWNP 421 >gi|161522556|ref|YP_001585485.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189348569|ref|YP_001941765.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346109|gb|ABX19193.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189338707|dbj|BAG47775.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 576 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 211/474 (44%), Gaps = 78/474 (16%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------------KWWESFNDTSLN 62 CTVGP++T P L ++ + +WW +F D L+ Sbjct: 38 CTVGPDFTPPRADLPAGWHALQRADAAAPASGASAPASTPTTDADPDPRWWRAFGDPLLD 97 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------------- 106 +LV+ A + NL + A RI A+ + + A P AS S+ Sbjct: 98 RLVERAARDNLDVQAAVLRIAQARAQVRAAAAQGLPDVRASASYQREQLGLKGFVEDQGL 157 Query: 107 ---------------RFIPN----LKTNSTGQLDS--------------DWKIDLFGQ-R 132 R P ++ + G LD+ W++DLFG+ R Sbjct: 158 DRQIDRLGAPGSPLDRLGPGTGAAVQQRARGALDALESPVNLWQAGFDASWELDLFGRVR 217 Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 R +E++ A +A A D A L++ +++ +Y+ R + + ++A +++D ++ +L+ Sbjct: 218 RTVEAADAQAGAAVASRDDALLSLEAEVAQTYLQLRGAQTQRALADELVDAQRELRDLTR 277 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 + G S L + +A + + + +P ++ + + ++ L+G ++ + Sbjct: 278 EQAAHGLASDLDVRSADARLAQLRAQLPQFDQQIVLLKNGLAYLVGGAPGALDDWLD--T 335 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL- 311 P + + +G+P+ L R RPDIR E L + A +G+A + YP +SL G + L Sbjct: 336 PRALPGVPPAVPVGLPSTLARRRPDIRRAEADLHAATADVGVAVAQFYPDVSLTGQVGLR 395 Query: 312 -THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 TH HWS FGP + LPIF G + SN+R ++ E + +++TVL A Sbjct: 396 ATHVREL----AHWSHLFYAFGPAVSLPIFSGGALVSNLRLTQARQAEAALAYRQTVLVA 451 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++V+NAL D+ L AV + ++ L+ YR+G LD+LD ER Sbjct: 452 LRDVDNALAVCRTDQTRAAALDDAVRAEQGALELARDRYRKGLSPFLDVLDAER 505 >gi|82701823|ref|YP_411389.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] gi|82409888|gb|ABB73997.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] Length = 474 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 114/452 (25%), Positives = 221/452 (48%), Gaps = 22/452 (4%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 A C +GP+Y +PH+ +F + ++ +I L WWE +D L +L+++AL QN + Sbjct: 29 ASCAMGPDYIRPHVET-SERFRLAQTEGQ-SIANLSWWELLHDNQLQQLIRLALAQNKDL 86 Query: 76 LQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKTNST--GQLDSDWK 125 QA + + + + R D P ++ ++ P T + GQ +W+ Sbjct: 87 KQAVASVEELEARLATARMDFLPKMDTNANAPAFGTLGGFKFPGFPTPYSYFGQATLNWE 146 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ID++G+ RR E++LA+L + L ++S + +Y D F ++ IA L + Sbjct: 147 IDIWGRIRRSNEAALADLMAREENRRAVVLTLVSSVAQAYFDLLQFDMQMGIARNALHSW 206 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++++ L+ + G S+L L + EAE + + + L++ + +S LLG Sbjct: 207 EESVALARAQLRGGVISRLDLDQFEAERANAATRVAELQRLTAQKENELSVLLGRNPVSI 266 Query: 245 LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 ++ + L IP + G+P++L++ RPDI E+ LA + A+IG A++ +P L Sbjct: 267 -----ERGRSLTEQLLIPEVPAGLPSELLQRRPDILQAEQTLAAATARIGAAQAARFPKL 321 Query: 304 SLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++ G + + N + G L +P+ + + R AE+ A++ +++ Sbjct: 322 NITGFLGVASPALSNLLLSGSEFGVGGLGLAVPLINAQALGMEQRAAEAQARQMLAQYEQ 381 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+L A +EVE+AL +++ + + V+ + ++ ++ + Y+ G S +D+L +R Sbjct: 382 TILLAFREVEDALVAVSTANEQRKAQEQQVDALRSALHIADLRYKGGITSYVDVLLAKRN 441 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E L+ R S V LY A+G G+ P Sbjct: 442 LFDAEFALAATHRLHLISVVQLYKALGGGWTP 473 >gi|186472393|ref|YP_001859735.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194725|gb|ACC72689.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 486 Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 114/443 (25%), Positives = 210/443 (47%), Gaps = 32/443 (7%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDT 59 R + + IV L GC VGP+Y +P + + Q ++ + + + D WW F D Sbjct: 4 RHLLAAVIVTSLSTGCAVGPDYVRPAVAMPDSFQGQAAVDHRQAAASADLATWWTGFGDP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-SISHRFIPNLKT---- 114 L + V +AL+QNL + QA R++ A+ + + A L PS + R +++T Sbjct: 64 QLTRFVTLALEQNLDLAQAAARVSQARAGLGAANAALLPSGNVNGQAARVYQSVETPLGR 123 Query: 115 --NSTGQLD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 NST D + W++D+FG RR E++LA+ ++ A +L V ++ Sbjct: 124 VLNSTPGFDRYGNDYEANFSASWELDVFGGLRRGREAALADYQASEAGEVATRLAVAAQT 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 YI R + R+ +A + L + + L + +G + L + + E + +++ IP Sbjct: 184 ADIYITIRGLQARLQVARKQLQTQQDLLSTIKLLYGKGLAADLQVSQAEGALAQVQASIP 243 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 LE ++ + +LG P T ++ P + G P L+R RPD+ Sbjct: 244 VLEAGLDAAMNALDVMLGSQPGTHRAELLEGGDIPTAPQI---AGTGSPGTLLRRRPDLI 300 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIF 335 E++LA S A+IG+A ++ YP +SL+G I + DN F + + L +F Sbjct: 301 VAERRLAASNARIGVAIAEYYPKVSLSGLIGSATSVASDNLFSSGASQGAGVLGLRWRLF 360 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+I + I+ A+ E ++ L+A ++VEN+ +++ + + L V + Sbjct: 361 DFGRINAQIKEAKGQEAEMLAAYRLAALHATEDVENSYSALVKREDQAAILAQGVSSLGR 420 Query: 396 SMSLSMINYRQGRYSLLDILDIE 418 + + S Y++G SL+++L + Sbjct: 421 ARAASFAAYQKGVVSLIEVLQAD 443 >gi|91775944|ref|YP_545700.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91709931|gb|ABE49859.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 481 Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 224/470 (47%), Gaps = 36/470 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLNK 63 I++ + L GC VGP+Y +P L P FS + ++D WWESF D LN Sbjct: 8 IYAAVALALTGCMVGPDYHRPATKL-PASFSAAEATPASEQASLDLDAWWESFEDPVLND 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF-----------I 109 L+K A N+ I +A RI A + A LFP + +I + + Sbjct: 67 LMKKAFADNVDIAKAVARIEEADAALREAGAALFPQIDMTGNAIRQKVTETGAFPIFPGV 126 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDAR 168 P ++ QL + +++D +G+ R + Y D L++ + +Y+ R Sbjct: 127 PVIRETYNLQLGTSFELDFWGRLRRAREAARAQALATYFAKDTVSLSLSGLVASNYLLLR 186 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + +I+++ + L ++++ L+ + G S L + + E ++ + + L + + Sbjct: 187 SLEAQIAVSRETLKSREESLALTKRRLDGGVASILDVHQAEVSHSNLVAQLADLVRQREV 246 Query: 229 NVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H ++ L G P + +H + P+ +P G+P+ L+ RPDIR E+ Sbjct: 247 IQHQLAVLTGDLELNVPVSGDIHQL--------PSPPVP-PAGLPSTLLEARPDIREAEQ 297 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L A+IG+AK+ L+PS++L G + + + W+ G L LPIF+ G++ Sbjct: 298 ALISENAQIGVAKAALFPSITLTANYGGESANLNRLLESPSRVWTTGLGLNLPIFNAGRL 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + +A + ++ T+Q ++ A KEV++AL ++ + ++ L+ + E KK++ +S Sbjct: 358 SARVDQATARQKQALSTYQSSIQTAFKEVKDALVAVRQSREREEALKVSQESAKKALEVS 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G + LD+LD +R + +++ + VDL+ A+G G+ Sbjct: 418 ENRYKSGYSAYLDVLDSQRVYNDAVLAFIQSRQARLTATVDLFKALGGGW 467 >gi|83594567|ref|YP_428319.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] gi|83577481|gb|ABC24032.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] Length = 461 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 18/458 (3%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 A+F + L L GC++ P+ +P + + + + WW F L+ L Sbjct: 4 AVFPAALALFLGGCSLVPDSERPALAMPAAFGDAAPAPAATPLADATWWRRFGSPELSAL 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNL--------KTN 115 + A+ N + A R+ A+ ++ RA FP+ S +S ++R + N KT Sbjct: 64 MSDAMTGNQDLEAAFRRVAQARASLAGTRAGWFPTLSASSNANRSLHNTARTAAATEKTT 123 Query: 116 STGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 D W++DLFG+ R + S+ A S D L++ ++ +Y+ A K+R+ Sbjct: 124 YDVGGDLSWEVDLFGKTRASVLSAEATAQSQALARDALALSIQGEVATAYVTALAAKDRL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +IA + L ++ + L + + G+ + L + + + IE+ +P LE +++ Sbjct: 184 AIARENLATAREILALIETQVSIGSQAPLEQAQQRSTVAGIEASLPQLEADLAAAQTSLA 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG F +Q N L +P I G P+DL+ RPDIR E L + A IG Sbjct: 244 VLLGRAPQGF--RIQAPGLN---ALALPAIAPGQPSDLLERRPDIREAEATLIAANADIG 298 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A+S +P+L+L+ S +L+ S G T S L IFD GK ++++ A E Sbjct: 299 AARSAFFPTLTLSASASLSGALSG-GTTTAGSLAGNLLGTIFDAGKREADLEVARQRWAE 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T++ TVL A+KE E+AL + + + L AV +++ ++ Y+ G L Sbjct: 358 LAATYRTTVLTALKEAEDALVTEDTGARREVALAEAVVQSTEALRIARTQYQVGDGDFLA 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L ++ L+ A+ +S +DL A+GSG+ Sbjct: 418 VLTAQQTVLSSRDSLAQARGDRFQSAIDLVKALGSGWR 455 >gi|83814367|ref|YP_444621.1| putative outer membrane efflux protein [Salinibacter ruber DSM 13855] gi|83755761|gb|ABC43874.1| putative outer membrane efflux protein [Salinibacter ruber DSM 13855] Length = 482 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 111/473 (23%), Positives = 217/473 (45%), Gaps = 36/473 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLI--------NIDTLKWWESFNDTSLN 62 ++ +AGC++ PE + P LP +F + D +WW ++ D SL Sbjct: 1 MLTVAGCSMTPEMSTPEAEQDLPDRFEAAPGDTTLPAAAADTAAYDATRWWAAYEDPSLT 60 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------- 108 LV AL NL + +A R+ RA LFPS A+ + Sbjct: 61 ALVDTALAANLNLEEAQGRVEELAAQFRIARAPLFPSVTANGQGNYQNQPANTGIGGAIG 120 Query: 109 ---IPNL--KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P+ T+ L +++D +G+ R ++L+ + A + A+L+VIS+ I Sbjct: 121 GGQGPDRFEFTDYQATLGLSYELDFWGRVRSQRTAALSQYFATAADLQTARLSVISQTIS 180 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + ++ + + + L ++ + ++ ++ +G L + +++ ++D P L Sbjct: 181 TYAQIASLRRQVRLGERTVGLLEERVAVTEDRYARGLVPSFQLYTVRQSLQAAQADQPDL 240 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E+ +TLLG A E + P P+ G+PADL+ RPD+R Sbjct: 241 ERRLYEAQSRFATLLGRFAGEQRALLPDSMTV--PLAPEPVPAGLPADLLMQRPDVRGAA 298 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFDKG 338 +L + +IG+A++++ PSLSL G D PG SF +L P+F G Sbjct: 299 LRLEAARQEIGVARAEMLPSLSLTGQGGTQSSELADLVDPG-QVFASFAGQLTAPLFQGG 357 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++N+ AE+ ++Q +++TVL A +EV+ +L + + ++ +++ V+ + + Sbjct: 358 QLRANLNAAEARYKQQAARYEQTVLTAFQEVKASLVAYEKQRQRYREVERQVDTARDAFQ 417 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y +G +L ++D ER + L+ +R + + + L+ A+G + Sbjct: 418 AQRDRYERGVGDVLSLIDAERTLLQARTRLAGVRRAVTNARLALHRALGGPWT 470 >gi|330888978|gb|EGH21639.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 477 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP+Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + A+ A ++ A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTNKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLSAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I + Sbjct: 308 AQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|254489778|ref|ZP_05102973.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Methylophaga thiooxidans DMS010] gi|224464863|gb|EEF81117.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Methylophaga thiooxydans DMS010] Length = 481 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 118/469 (25%), Positives = 218/469 (46%), Gaps = 27/469 (5%) Query: 5 RAIFSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESFND 58 R I +L V L + C +YT P P + S + + WW F D Sbjct: 4 RLITTLICVALTTSACASFRDYTAPSAPETVERIEFEQSDDSRFKSASQPVADWWREFTD 63 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------------SH 106 +L +LV+ A+ N I A + A+ D +PS AS S Sbjct: 64 PALTQLVEAAMAANPDIRIAFSNLQEARALSREAGYDRYPSVDASADYSRNLNSQETESG 123 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + +P N D+ W++DLF + IE+ A +SA A + + + +++ +Y+ Sbjct: 124 QALPRTNNNYQAGFDASWELDLFNRVSSQIETQAALAESAEANLQYMYVTIAAEVARTYV 183 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + R+ IA + + EL+ + G + L + + + ++ + IP LE Sbjct: 184 ELRGAQHRLDIAVRNQKNQAETHELTQVLLDGGRATALDVARAKTQMTLTAATIPPLEAQ 243 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ +S L G + + ++ P L + + +G L++ RPDIR E+ L Sbjct: 244 MTAAINRLSVLTGQVPDTLRNQLSDKAP--LPELPVTVAVGDAESLLKRRPDIRAAERTL 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A SV+ +A +DL+P++ L GS+ N SF S GP + +F++ +++ Sbjct: 302 AASVSAYNVATADLFPTVRLLGSLGFVATNLSSFGTSALAGSLGPSVEWQVFNRDSVRAR 361 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I +A++ +Q Q T+ +TVL A++E + AL++ +++ LQ A + K S L+ Sbjct: 362 IDQADARSQAQLATYDKTVLAALEETQTALSNFAREEERRATLQLAAQSAKHSGDLAKQR 421 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + +G LD+LD ER +E + ++A ++A + + +Y A+G G+ Sbjct: 422 FDEGYDDFLDVLDAERTL--LETEDTLANSEIASVLNLIGIYKALGGGW 468 >gi|330953831|gb|EGH54091.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae Cit 7] Length = 477 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 129/471 (27%), Positives = 219/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F LL+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTALLSACQMVGPDYRLPKEGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P + I +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--SACNQLPQIAQVIPVGDGAALLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALREAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|320353442|ref|YP_004194781.1| NodT family RND efflux system, outer membrane lipoprotein [Desulfobulbus propionicus DSM 2032] gi|320121944|gb|ADW17490.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobulbus propionicus DSM 2032] Length = 491 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 130/465 (27%), Positives = 229/465 (49%), Gaps = 28/465 (6%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKL 64 +F L + LL C VGP+Y P + P+Q+S G TL WW F D L+ L Sbjct: 13 LFLLSVALLTACAPVGPDYQPPQTAM-PSQWSEGTGSGNTPATTLSHWWSLFRDPLLDSL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASI--------SHRFIPN 111 + AL N + A R+ A+ A L PS SY + S R+ Sbjct: 72 IARALTANPDLRIAETRVVEARAARRIATASLLPSVDLGGSYTTSRRSERVQSSDRYQDV 131 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +T D+ W++DLFG RR E++ ANL + +++ +++ +YI+ R Sbjct: 132 FETG----FDAGWELDLFGGVRRQAEAAEANLAATVEDWRGVCVSLAAEVARNYIELRSS 187 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R++IA + + ++ +E+ KF G S L + + E + +++P LE S + Sbjct: 188 QQRLAIARENSRIQEQTVEVVRNKFHLGLGSDLEVAQAETLLAQTRAEMPLLESSAAQAM 247 Query: 231 HNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H ++ LLG P T L + P + ++L+R RPDIR E++LA + Sbjct: 248 HQLALLLGQQPQTLKLELTAEAPLPPVPPHLPHVLP---SELLRQRPDIRSAERRLAVAT 304 Query: 290 AKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A +G A +DL+P SL+ I L + + + WS GP + P+FD G ++ + Sbjct: 305 ATVGAATADLFPRFSLSALIGLQSTSLGDLIASGSRFWSAGPAVRWPLFDGGTARAAVDA 364 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +E+ + +T+++TVL A+ E ENAL ++ ++ LQ AV+ ++++ ++ Y+ Sbjct: 365 SEAQRRRAELTYEQTVLTALTETENALVTLERERTTHAILQEAVKASQRAVVIAHGQYQA 424 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++L + A + + L+ + ++LA + LY A+G G+ Sbjct: 425 GITPFLNVLQSQNALYQSQDKLAQSGQRLAIGMLTLYKALGGGWQ 469 >gi|269798425|ref|YP_003312325.1| RND efflux system, outer membrane lipoprotein, NodT family [Veillonella parvula DSM 2008] gi|269095054|gb|ACZ25045.1| RND efflux system, outer membrane lipoprotein, NodT family [Veillonella parvula DSM 2008] Length = 566 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 116/444 (26%), Positives = 213/444 (47%), Gaps = 28/444 (6%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P + + K + + WW+ FND L++L+ + L+ N + A R+ + + Sbjct: 108 PLPYEVVEGKAVSEEELAHWWKVFNDPVLDQLIDLTLKNNRQLEVARSRVRQGRLQLGIA 167 Query: 93 RADLFP------------------SSYASISHRFIPNLKTNS--TGQL--DSDWKIDLFG 130 A P S +I++ IP+ T + TG+L D+ W+ID+FG Sbjct: 168 EAQRLPWLDASGSWSANRGQGEWDSDQEAINNLPIPDKMTRNVETGKLGIDARWEIDIFG 227 Query: 131 QRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 +++ + +N L ++ A + +++ ++ Y+ R +E++ I + + ++ +E Sbjct: 228 RQKAKSRAASNSLQASQADLYSTWVSLSAETALQYMSLRTLQEQLRITEEDVKRQQEALE 287 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L + + G ++L + + + +++IP+L+K+ + +S L G E + Sbjct: 288 LIKINYQSGIINELPVQQATYALSQTQAEIPSLKKNIASTMSALSILTGTVPGEIDGLLM 347 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 + N P + + IGIPA+ +R RPDI+ E+++A K AKSDL P SLNGSI Sbjct: 348 E--NTSLPTVDPHMFIGIPAEALRQRPDIQAAERRIAAQQQKTKAAKSDLKPRFSLNGSI 405 Query: 310 ALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 L +S GP + +PIF+ G I+ NI+ QE ++ETVL A+ Sbjct: 406 GLESFSSGGLISAIGKMIGIGPSITMPIFNAGAIRKNIKVQTEKEQEYLALYEETVLKAV 465 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EV NA+T ++D +L+ AVE +++ SL+ N+ G L +LD R Sbjct: 466 GEVRNAVTDASQDHIKSEELKSAVESAQQAESLAQTNFDSGLSDYLSVLDARRNVLSARR 525 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGY 450 +++ Q V L+ ++G G+ Sbjct: 526 QYIMSRGQEFADTVRLFKSLGGGW 549 >gi|114047530|ref|YP_738080.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-7] gi|113888972|gb|ABI43023.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-7] Length = 486 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 116/467 (24%), Positives = 232/467 (49%), Gaps = 37/467 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF--------SIGNSKNLINIDTLKWWESFNDTSL 61 L + +AGC +GP+Y +P + L P+Q+ S +L + L W + D L Sbjct: 26 LTALTVAGCAMGPDYERPELTL-PSQYQAQILSQTSAEQGSSLKEVSALSWRHFYQDPVL 84 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 L++ AL NL + A R+ AA+ + V + L+P AS F +L + +T + Sbjct: 85 ILLIEHALSSNLDLQMAQSRLLAARSKMTVVDSALWPEISASAG--FERSLDSGTTSKDP 142 Query: 122 S-----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S W++DL+G RR E++ A+ S ++ + +++IS + Y + Sbjct: 143 SPGTTLDLAGTVSWELDLWGANRRASEAAKADYLSEVEKLRLTYVSLISDIASRYYEWLD 202 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++R S++ + + +K ++++ L+ G S L + + E E++S + +PTL+ + Sbjct: 203 IEQRYSVSIDTVGIRQKELDIAKLRHANGVISGLDVRQAEVELQSTKVTLPTLDYERKYK 262 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLAD 287 ++ + LLG E+ Y N+ +P ++ G+P++L+ RPD++ E+ + Sbjct: 263 INQLHILLG----EY-DYALPSPQGLPENVGLPYELSAGVPSELLTLRPDVKMSEQAMIA 317 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A++GIAK+ +P +++G ++ + F WS + PIF++GKI + Sbjct: 318 ANAQVGIAKAAFFPKFTISGQYGRENNHLKDIFDSNGVTWSLLGGISAPIFNRGKIAAEY 377 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A A++ ++++ VL A +V +AL ++ ++ + + V+ L+ + Y Sbjct: 378 DIATEEAKQSMLSYRNVVLTAYFDVNDALNNLKRAQEAIKAQRELVQSSSAYARLARLRY 437 Query: 405 RQGRYSLLDILDIERATAKVEVDLS--IAKRQLAKSYVDLYIAIGSG 449 + G + LD++D +R ++ S + +QLAK + LY A+G G Sbjct: 438 QNGVATSLDLMDAQRQLFSAQLAYSEILRDKQLAK--IALYRALGGG 482 >gi|223935014|ref|ZP_03626933.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223896467|gb|EEF62909.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 495 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 125/458 (27%), Positives = 211/458 (46%), Gaps = 24/458 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-IDTLKWWESFNDTSLNKLVKIALQQ 71 V+L GC VGP Y +P + P F N L WWE F D +L L+KIAL Sbjct: 37 VILVGCAVGPNYKRPTVNS-PNNFRSATGPPTTNSFGDLPWWEIFQDDTLQNLIKIALTN 95 Query: 72 NLTILQATERINAAKENILSVRADLFPS-SYASISHR---------FIPNLKTNS--TGQ 119 N I A R+ A+ RA FP Y + R F N + S G Sbjct: 96 NYDIRVAATRVEQARAIYAENRAAFFPQLGYQVGASRGKNALFTTPFFNNGRVTSDYIGA 155 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W+IDL+G+ RR E++ A ++ + +I+ L SY+ + I Sbjct: 156 GNVSWEIDLWGRIRRLNEAAQAQYFASQEARRNVMITLIADLAQSYLQLLALDRELEITR 215 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + ++++ + + QG SKL + A + S + IP LE+ + + IS LLG Sbjct: 216 QNTASFSDSLKIFNQRLEQGVASKLETSRAAAALASTAASIPDLERQIVIQENQISVLLG 275 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P F + N Q L + G+P+ L++ RPDIR ++ + A+IG+A + Sbjct: 276 QNPGPVF-----RNKNLLQLTLPPDVPAGLPSSLLQRRPDIREADQLFRSANAQIGVAVA 330 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 D P L L G+++ G + WS L PIF G++ A++ ++ Sbjct: 331 DFLPVLDLTALLGAVSPELSAITSGKSGLWSVAGSLTGPIFQGGRLVGQYHAAQAVREQA 390 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++Q+T L A +EV NAL + + ++I + +V +++++ +S Y G+ S ++ Sbjct: 391 RLSYQQTALIAFQEVSNALIARQKFQEIRVQQTLSVSAYEEAVRVSTQRYLVGQASYYEL 450 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ ++ ++ L + + V LY A+G G+ P Sbjct: 451 LEAQQQLFPAQISLVQTQLNQFLAVVQLYRALGGGWQP 488 >gi|289646485|ref|ZP_06477828.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] Length = 477 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP+Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + A+ A ++ A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTDKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I + Sbjct: 308 AQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|254489429|ref|ZP_05102632.1| RND efflux system, outer membrane lipoprotein, NodT family [Roseobacter sp. GAI101] gi|214041936|gb|EEB82576.1| RND efflux system, outer membrane lipoprotein, NodT family [Roseobacter sp. GAI101] Length = 446 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 173/331 (52%), Gaps = 29/331 (8%) Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI------------------L 181 A L SA + V +A L++ I S ID IS+ + + Sbjct: 121 ATLSSANSAVTVADLDLTGTEICSPIDGISSVAAISVGAVVTANQTDALATVTRLDPIYI 180 Query: 182 DLYKKNIELSHLKFTQ--GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 D+ + + + ++ + GA S+L V+ +A ++ + +P LE F V+ I+TLL Sbjct: 181 DMTESSARMLRVRAQENAGAASELDRVQAQALLEEARASLPALETGFENAVYGIATLLAE 240 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 PA + ++K + QP G+PADL RNR D+R E+KLA +VA +GIA++DL Sbjct: 241 PAGPLMADLRKGAP--QPYPKGGSAAGVPADLFRNRSDVRASERKLAAAVANVGIAEADL 298 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 YPS+SL G++ + S W FGP L LP+ + +++++ +A S A++ + W+ Sbjct: 299 YPSVSLTGTVTAAGNGS-------WGFGPSLSLPVASQSRLRASRAQAISQAKQAELDWR 351 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +LNA+++ ++A ++ +++ + + + +++ LS Y G LL++LD E Sbjct: 352 AQILNAVEDTQSAQSAYRRNQRALATFRSTSASYARALELSRATYSAGTTDLLNLLDAEM 411 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + V + ++ + L S+++L ++ G G+ Sbjct: 412 SRSTVRLSVAGDAQNLTNSWINLQVSTGRGW 442 >gi|331011140|gb|EGH91196.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 477 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 220/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARVTVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPLY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + S N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|330986571|gb|EGH84674.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 477 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP+Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + A+ A ++ A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTNKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I + Sbjct: 308 AQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|28870779|ref|NP_793398.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854028|gb|AAO57093.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 477 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 124/471 (26%), Positives = 218/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFSAVLSACQMVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + ++ +A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRSRYQTSEAQAAGGFTNGAKIGAQRVQESGEAY 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTEKVPVSNVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + L L ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELGIARESLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P E L N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKP-VEQLPVGVSTCNEL-PHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L + G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTLPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + +++ Sbjct: 360 -RARIHQAEASAQASLARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAREAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y GR S L L R V ++ A ++A ++L++A+G G+ Sbjct: 419 THRFYEAGRASFLADLQATRTYTDVRAQMAEANTEVAMGQINLFLALGGGW 469 >gi|94495981|ref|ZP_01302560.1| probable outer membrane efflux protein [Sphingomonas sp. SKA58] gi|94424673|gb|EAT09695.1| probable outer membrane efflux protein [Sphingomonas sp. SKA58] Length = 498 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 132/464 (28%), Positives = 231/464 (49%), Gaps = 25/464 (5%) Query: 11 FIVLLAG------CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLN 62 FI LL G C GP+Y P P IG + + + WW ++D L+ Sbjct: 35 FITLLLGASALTACAAGPDYRPPAPPASAAAPFIGAADPAVAQSPAQDHWWRLYDDPLLD 94 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-------YASISH-RFIPNL-K 113 LV+ AL N I A R+ A+ + R++ PS+ Y +S + +P + + Sbjct: 95 TLVRDALAANTDIRVAVARLERARAQLRGARSNRLPSTTLSGSPTYGRVSQAQTLPGMDR 154 Query: 114 TNST--GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N T LD +++DLFG+ +R IE++ + +A A D ++ V++ + +Y+DA Sbjct: 155 ENWTIDMGLDVAYEVDLFGRVKRSIEAARGDAAAAAADADAVRVAVVADTVRAYVDATAS 214 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ERI++A Q +DL +++ ++ +F G + +L +V++ + + IP+LE + Sbjct: 215 AERIAVARQTVDLLDRSLRITQARFDVGRSDRLDVVRVTSLRDQQAALIPSLEADRNAAL 274 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++TL G + ++ P+L PI +G L+ RPD+R E++LA A Sbjct: 275 FRLATLTGRTPQDLPDAVRAARQT--PDLTQPIPVGDGRALLARRPDVRAAERRLAADTA 332 Query: 291 KIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A +DLYP ++L GS+ A+ + F G +W GP + ++ ++ I A Sbjct: 333 RIGVATADLYPRITLGGSVGTTAIGGGDLFGGGPLNWLLGPLISWAFPNQEANRARIAAA 392 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + ++ TVL A++E E AL++ + T LQ A + ++ +S R+G Sbjct: 393 RADGDVALASFDGTVLRALEETETALSNYAQALSRRTALQTARDEAARAARISTARQREG 452 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R L +LD R A + DL+ A R +A + VDL+ A+G G+ Sbjct: 453 RIDFLTVLDALRTQAAADADLASADRNVAFAQVDLFRALGGGWR 496 >gi|116686558|ref|YP_839805.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|116652273|gb|ABK12912.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 498 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 45/459 (9%) Query: 18 C-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+Y P PL N L++ D + WW+ ++D L+ LV+ AL Sbjct: 22 CKSVGPDYKLPQHAYVNAPLANHALDDANGA-LVSRDAVPGNWWQLYDDPVLDGLVRDAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F S + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALVVANEQGGFSGSAEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGTVG-INVSYELDLFGKLRRGVEAARADSEAVKAAGDLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E R Sbjct: 193 SAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEG--RR 250 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 V P L PI IG A L+R RPD+R E++LA + Sbjct: 251 KVAQYQLAALLARAPADLPKAAAECERLPKLRQPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GSI + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSVSIGASAGSIGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRLYA 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 GR S + LD R V ++ A+ Q+A V L++ Sbjct: 429 AGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVRLFL 467 >gi|330996773|ref|ZP_08320645.1| RND transporter, HAE1 family [Paraprevotella xylaniphila YIT 11841] gi|329572495|gb|EGG54146.1| RND transporter, HAE1 family [Paraprevotella xylaniphila YIT 11841] Length = 1489 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 114/454 (25%), Positives = 226/454 (49%), Gaps = 32/454 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ C +G YT+P MPL P + +++ +I L WWE +NDT+L +L+ AL N Sbjct: 1049 LSSCQIGKSYTRPDMPL-PARLDT-LTQDTASIGDLSWWELYNDTTLQQLIHRALTYNKD 1106 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ--LDSD--------- 123 + A+ R+N A++FP + A R N +T + G D+D Sbjct: 1107 LKIASARMNELAALKRVDFANMFPQATA----RLNGNRETTNYGDDNFDADSELSLTASI 1162 Query: 124 -WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DL+G R + S A ++ K+ +++++ SY + ++I + L Sbjct: 1163 SWELDLWGNLRWARDRSTAEFLASVENCRAVKMGLVAQVAQSYFELMALDNELAIVRRTL 1222 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + ++ + L+ ++F G TS++ + + E+ + +P LE+ + I+ L G Sbjct: 1223 EARREGVRLAEIRFKGGLTSEIVFQQAKVELAKTATMVPDLERRISLKESEIALLTG--- 1279 Query: 242 TEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 +F + + + N + +P + +G+P+ L+ RPDIR E++L + A++G+A +++ Sbjct: 1280 -DFPYAVNR--NILPEEIQLPDALPLGLPSTLLERRPDIRKAERELMAAHAEVGLAYTNM 1336 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +P L+L ++ + + +S+ L P+F GK ++ ++ ++ + + Sbjct: 1337 FPRLALTATLGTESETLRDFLKSPYSYLAGNLLSPLFAMGKNRAALKAKRAAYEGAVAEY 1396 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++TVL A KE +A+ + N+ K I + E + ++ L+ + Y G LD+LD + Sbjct: 1397 EQTVLTAFKETHDAIINFNKIKDIYESRRQLAEASRTAVELAQLQYINGVIGYLDLLDAQ 1456 Query: 419 RATAKVEVDLS--IAKRQLAKSYVDLYIAIGSGY 450 R +V LS + +QL ++LY A+G G+ Sbjct: 1457 RNYFDAQVSLSNAVCNKQLM--IINLYKALGGGW 1488 >gi|15597721|ref|NP_251215.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|107101972|ref|ZP_01365890.1| hypothetical protein PaerPA_01003019 [Pseudomonas aeruginosa PACS2] gi|116050469|ref|YP_790712.1| putative outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218891496|ref|YP_002440363.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|296389052|ref|ZP_06878527.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] gi|313107423|ref|ZP_07793613.1| putative outer membrane protein [Pseudomonas aeruginosa 39016] gi|9948581|gb|AAG05913.1|AE004680_1 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|25137485|dbj|BAC24096.1| outer membrane efflux protein [Pseudomonas aeruginosa] gi|115585690|gb|ABJ11705.1| putative outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218771722|emb|CAW27496.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|310880115|gb|EFQ38709.1| putative outer membrane protein [Pseudomonas aeruginosa 39016] Length = 498 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 231/474 (48%), Gaps = 52/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 GC +GP+Y +P + +P +F + D + WWE + D +LN L + Sbjct: 17 GGCAIGPDYQRPDL-AVPAEFKEAEGWRRAEPRDVFQRGAWWELYGDQTLNDLQMHLERS 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASI-----------SHRFIPN--------- 111 N T+ Q+ + A+ + RA FPS ++ S +P Sbjct: 76 NQTLAQSVAQFRQAEALVRGARAAFFPSITGNVGKTRSGQGGGDSTVLLPGGSTVSSGGS 135 Query: 112 --LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + T+ + L W++DL+G+ RR +E++ A+L ++ A + +L+ S+L +Y+ R Sbjct: 136 GAISTSYSTNLSVSWEVDLWGKLRRQLEANQASLHASAADLAAVRLSQQSQLAQNYLQLR 195 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+I + + + Y+++++++ K+ G ++ + + ++KS ++ L+ Sbjct: 196 VMDEQIRLLNDTVTAYERSLKVAENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRAQ 255 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKK 284 H I+ L+G P +F N P +P + +P+ L+ RPDI E+K Sbjct: 256 LEHAIAVLVGLPPAQF---------NLPPVASVPKLPDLPAVVPSQLLERRPDIASAERK 306 Query: 285 LADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + + A+IG+AK+ +P L+L+ S +L++ S P N WS GP+ + +FD G Sbjct: 307 VISANAQIGVAKAAYFPDLTLSAAGGYRSGSLSNWISTP--NRFWSIGPQFAMTLFDGGL 364 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I S + +AE++ + T+++TVL+ +EVE+ L ++ + + A+E ++++ L Sbjct: 365 IGSQVDQAEATYDQTVATYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREALRL 424 Query: 400 SMINYRQGRYSLLDILDIERATA--KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y+ G D++ +ATA L++ +L S V L A+G G++ Sbjct: 425 AENQYKAGTVDYTDVV-TNQATALSNERTVLTLLGSRLTAS-VQLIAAMGGGWD 476 >gi|221064714|ref|ZP_03540819.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220709737|gb|EED65105.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 495 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 223/464 (48%), Gaps = 26/464 (5%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLN 62 A +L V+L GC ++ P P +P+ P + +G+ + + L W F D L Sbjct: 16 ASLALSAVVLTGCMSLAPAPDTPPLPV-PEAWPAHLGSGTDGAHAGELAWQAYFTDPLLQ 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ 119 +L++ AL+ N + A R+ A R+D FP+ R +L + Q Sbjct: 75 RLIETALENNRDLRVAALRVEEASATFRIQRSDRFPAMGVGAQGGRARVPGDLNMSGRSQ 134 Query: 120 LDSD---------WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + W++DL+G+ R++E ++L ++ A L +I+++ Y+ R Sbjct: 135 VGGEYRAEVGLTTWELDLWGRIRNLEDAALQTWLASDAARQAVHLALIAQVADGYLGLRE 194 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ER++IA Q + +++ + + G+TSKL L +++ + ++ + LE++ Sbjct: 195 IDERVAIARQTVTTREESYRIFRRRVEVGSTSKLDLTQVQTLLNQAQALLTQLEQARTTQ 254 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +H ++ L+G P + ++ + + + G+P++L+ +RPDI E +L S Sbjct: 255 LHALALLVGADPGP-----LPAKAPFDETTVLAELRAGLPSELLVSRPDIISAEHQLRAS 309 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ P ++L GS + F + W+F P L LPIFD G+ ++N+ Sbjct: 310 NAHIGAARAAFLPRIALTGSFGTASSDLNGLFDSGSRAWTFMPTLSLPIFDGGRRRANLE 369 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +E +++T+ A +EV +AL++ + + +T + +E + L+ + Y Sbjct: 370 LSEVRRDIAVAGYEKTIQTAFREVADALSAKHWLAEQLTIQRANLEAQSERARLAKLRYD 429 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++LD +R + L A+R L S V LY A+G G Sbjct: 430 NGSAAFLEVLDAQRDLLGAQQQLVQARRALLSSQVALYAALGGG 473 >gi|253565630|ref|ZP_04843085.1| outer membrane efflux protein oprM [Bacteroides sp. 3_2_5] gi|251945909|gb|EES86316.1| outer membrane efflux protein oprM [Bacteroides sp. 3_2_5] Length = 468 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/422 (23%), Positives = 206/422 (48%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN ++L A +RIN AK N+ R + FP+ ++ + Sbjct: 51 QWWKAFQDPVLDSLISVAVKQNYSVLTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 108 Query: 111 NLKTNST------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T L+ +W++DLFG R +++ N ++ + +++ Sbjct: 109 QQSSGNTSDLPQSTQHYYDASLNMNWELDLFGSIRNRVKAQKENFAASKEEYTGTMISLC 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 169 AQVASAYINLRELQQELAVVQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 228 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + P+ PI +G+PADL+ RPD Sbjct: 229 SIPQIESGINQYITTLAILLGTYPQEVRPALTAPGT--LPDYMEPIGVGLPADLLLRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 287 IRSAERSVNAQAALVGASKSDWLPQVFLKGSVGYAAKDLKDLTHHKSM-----TYEIAPA 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL A++E +NA+ + K + L+ Sbjct: 342 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREV 401 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 402 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 461 Query: 450 YN 451 ++ Sbjct: 462 WS 463 >gi|107022833|ref|YP_621160.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|105893022|gb|ABF76187.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] Length = 561 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/535 (24%), Positives = 235/535 (43%), Gaps = 95/535 (17%) Query: 5 RAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQF-------------------------- 36 R I ++ +LAGCTVGP++ KP P + Sbjct: 17 RGIAAMLAACAVLAGCTVGPDF-KPPQADAPANWHDLQAADAASPASGASAASAASAASA 75 Query: 37 --SIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 + S + + D +WW +F D L++LV+ A NL + A RI A+ I + Sbjct: 76 PGAHAPSSPVTSADPDPRWWRAFGDPLLDQLVERAAHDNLDVQAAVLRIAQARAQIRAAA 135 Query: 94 ADLFPSSYASISH-------------------------------RFIPN----LKTNSTG 118 A P A+ S+ RF P ++ + G Sbjct: 136 AQGLPDVRATASYQREQLGLKGIVEEQGIDQRVDRLGAPGSPLDRFGPGTGASVQQGARG 195 Query: 119 QLDS--------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 LD+ W++DLFG+ RR +E++ A +A A D A L++ +++ + Sbjct: 196 ALDALEAPVNLWQAGFDASWELDLFGRVRRSVEAAGAQASAAIASRDDALLSLEAEVAQT 255 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R + + ++A + ++ ++L+ + G S L + EA + I + +P + Sbjct: 256 YLQLRGAQAQRALADDLQRAQRELLDLTREQAAHGLASDLDVRSAEARLAQIRAQLPQFD 315 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + ++ L+G ++ + P++ + +G+P+ L R RPDIR E Sbjct: 316 QQIVLLRNGLAYLVGGAPGALDDWLD--APRALPDVPPAVPVGLPSTLARRRPDIRRAEA 373 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFD 336 +L + A +G+A + YP +SL G + L +H HWS FGP + LPIF Sbjct: 374 ELHAATADVGVAVAQFYPDISLTGQVGLRASHVREL----AHWSHLFYSFGPAVSLPIFS 429 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ SN+R +++ E + +++ VL A+++V+NAL D+ L AV+ + + Sbjct: 430 GGQLVSNLRLSQARQAEAALAYRQAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGA 489 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR+G LD+LD ER ++ Q V LY A+G G+ Sbjct: 490 LDLARDRYRKGLSPFLDVLDAERQWSEGRQQAEQGALQKTTDLVALYKALGGGWE 544 >gi|330970779|gb|EGH70845.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 477 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 128/471 (27%), Positives = 218/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQMVGPDYQVPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA LDL K+++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARASLDLQKQSVSLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P + + +G A L++ RPD+R E Sbjct: 243 EARRQAAIFRLSMLLAKPVEQLPAGV--STCNQLPQIAQVMPVGDGAALLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|91782927|ref|YP_558133.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91686881|gb|ABE30081.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 516 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 232/480 (48%), Gaps = 50/480 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------------NIDTLKWWESFN 57 +++L+GC++ P Y P P T F + L ++ +WW+ F+ Sbjct: 20 LMVLSGCSLAPTYEVPSTPTTAT-FKEAPQQPLSAQEAGTWKTAQPSEDVARGEWWKVFD 78 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR------F 108 D LN L + AL N + A R+N A+ + RA LFPS + R F Sbjct: 79 DAKLNDLEQQALDANQNLKAAAARVNEARAMNQAARAGLFPSLDAGFGPTRQRVSAASLF 138 Query: 109 IPN-----LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P+ +T Q + +++DLFG+ ++++ A+ + A L + + + Sbjct: 139 EPDGTNVPQRTFWRAQASASYEVDLFGRVASTVDAARADTQRSEALFRSVMLALQADVAQ 198 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y R + ++L + ++L ++T+G ++L L + +AE+ S +SD T+ Sbjct: 199 NYFALRELDAESEVFRNAVELRQHALKLVQRRYTEGEITELDLSRAKAELASAQSDAMTV 258 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQ 281 ++ + H+++ LLG EF ++ +P NL +P G+P+ L+ RPDI Sbjct: 259 QRLRAASEHSLAVLLGKAPAEF----SMAADPIRPVNLRVPP--GLPSSLLERRPDIAAA 312 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGP----KLYLPI 334 E+ +A + ++IGIAK+ +PSL++ G+ T + F + + GP L +PI Sbjct: 313 ERAMAAANSRIGIAKAAFFPSLTITGTGGFESATIGDLFKWSSRAFLLGPLAGTALNIPI 372 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQH-AVE 391 FD G+ K N+ A + +E +++ VL A +EVE+ L+ + ED+ T+ Q+ AV+ Sbjct: 373 FDGGRRKGNLANARAVYEEDVANYRQQVLVAFREVEDNLSDMRILEDQ---TRTQNEAVK 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ LS Y +G + LD++D ER + + A S V+L A+G G+ Sbjct: 430 ASQRAADLSRSQYTEGAVNYLDVIDAERTVLQARRAAVQLQGVQAASTVNLIRALGGGWG 489 >gi|254250345|ref|ZP_04943664.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] gi|124879479|gb|EAY66835.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] Length = 498 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/459 (26%), Positives = 216/459 (47%), Gaps = 45/459 (9%) Query: 18 C-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+Y P PL N L++ D + WW+ ++D L+ LV+ AL Sbjct: 22 CKSVGPDYKLPQHAYVNAPLANHALDDANGA-LVSRDAVPGNWWQLYDDPVLDGLVRDAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F S + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALVVANEQGGFSGSAEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGTVG-INVSYELDLFGKLRRGVEAARADSEAVKAAGDLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E R Sbjct: 193 SAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEG--RR 250 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 V P L PI IG A L+R RPD+R E++LA + Sbjct: 251 KVAQYQLAALLARAPADLPKAAAECERLPKLRQPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSVSIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVNGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRLYA 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 GR S + LD R V ++ A+ Q+A V L++ Sbjct: 429 AGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVRLFL 467 >gi|163857895|ref|YP_001632193.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163261623|emb|CAP43925.1| probable outer membrane efflux protein [Bordetella petrii] Length = 495 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 125/473 (26%), Positives = 229/473 (48%), Gaps = 30/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTL--KWWESFN 57 RA+ + GC VGP++ P M L P + G + ++ D + +WW N Sbjct: 10 RAVLLGMLAAAGGCAVGPDFVTPEADLAQMTLRPRE---GQPRQALSADPVPREWWHLLN 66 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIP----- 110 D L+ LV A NL + A R+ ++ A LFP AS++ I Sbjct: 67 DPVLDALVARAWDGNLDLQAAAARVEQSRARAGVALAQLFPRVDLDASLTRGAISENGPM 126 Query: 111 ---NLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 T++T +DW+IDL+G+ RR E ++A L + + A++ + +++ Sbjct: 127 AALGAPTSTTDLWRAGFQADWEIDLWGRLRRQREGAVATLQATLYEQRSAQVALSAEIAR 186 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ R + R+ IA + ++ + L+ + G ++ L A+ SI++ IP L Sbjct: 187 QYVALRGVQTRLDIARRNQEIAAHLLRLTETRLRNGVATRFDLSSARAQKASIDALIPPL 246 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ ++ L+G P Q + P+ + + +G+P++L RPDI+ Sbjct: 247 REQQNVLLNALALLVGQPPRSL--DAQLSTPRPLPDAALELPVGLPSELALRRPDIQSAS 304 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L + A IG A++D YP +SL G AL + +T +S GP++YLPIF G+ Sbjct: 305 ARLHAATAAIGAAQADFYPRISLAGGFGTRALQASDLGLWSSTEFSIGPRIYLPIFQGGR 364 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + +E+ +E I +++TVL A EV++AL ++ ++ L+ A+ + ++ Sbjct: 365 LVRMLELSEAKQREAAIAYRQTVLRAWHEVDDALNAMVTQQQRQQALRQAMMQSRDALRA 424 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + +Y+QG + +L +RA + E+ LS A + V LY A+G G+ P Sbjct: 425 AQSSYKQGAADYVTVLAAQRAVLESELHLSNAATGSVLAVVYLYKALGGGWAP 477 >gi|320328107|gb|EFW84112.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 477 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 127/471 (26%), Positives = 220/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQVVGPDYQPPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ +++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITLVADVVH 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + S N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAQANTQVAMGQINLFLALGGGW 469 >gi|116686926|ref|YP_840173.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|116652641|gb|ABK13280.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 561 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/535 (24%), Positives = 235/535 (43%), Gaps = 95/535 (17%) Query: 5 RAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQF-------------------------- 36 R I ++ +LAGCTVGP++ KP P + Sbjct: 17 RGIAAMLAACAVLAGCTVGPDF-KPPQADAPANWHDLQAADAASPASGASAASAASAASA 75 Query: 37 --SIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 + S + + D +WW +F D L++LV+ A NL + A RI A+ I + Sbjct: 76 PGAHAPSSPVTSADPDPRWWRAFGDPLLDQLVERAAHDNLDVQAAVLRIAQARAQIRAAA 135 Query: 94 ADLFPSSYASISH-------------------------------RFIPN----LKTNSTG 118 A P A+ S+ RF P ++ + G Sbjct: 136 AQGLPDVRATASYQREQLGLKGIVEEQGIDQRVDRLGAPGSPLDRFGPGTGASVQQGARG 195 Query: 119 QLDS--------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 LD+ W++DLFG+ RR +E++ A +A A D A L++ +++ + Sbjct: 196 ALDALEAPVNLWQAGFDASWELDLFGRVRRSVEAAGAQASAAIASRDDALLSLEAEVAQT 255 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R + + ++A + ++ ++L+ + G S L + EA + I + +P + Sbjct: 256 YLQLRGAQAQRALADDLQRAQRELLDLTREQAAHGLASDLDVRSAEARLAQIRTQLPQFD 315 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + ++ L+G ++ + P++ + +G+P+ L R RPDIR E Sbjct: 316 QQIVLLRNGLAYLVGGAPGALDDWLD--APRALPDVPPAVPVGLPSTLARRRPDIRRAEA 373 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFD 336 +L + A +G+A + YP +SL G + L +H HWS FGP + LPIF Sbjct: 374 ELHAATADVGVAVAQFYPDISLTGQVGLRASHVREL----AHWSHLFYSFGPAVSLPIFS 429 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ SN+R +++ E + +++ VL A+++V+NAL D+ L AV+ + + Sbjct: 430 GGQLVSNLRLSQARQAEAALAYRQAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGA 489 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR+G LD+LD ER ++ Q V LY A+G G+ Sbjct: 490 LDLARDRYRKGLSPFLDVLDAERQWSEGRQQAEQGALQKTTDLVALYKALGGGWE 544 >gi|170737896|ref|YP_001779156.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169820084|gb|ACA94666.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 503 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 119/482 (24%), Positives = 219/482 (45%), Gaps = 53/482 (10%) Query: 13 VLLAGCTVGPEYTKPHM-----------PLLPTQFSIGNSKNLINIDT-LKWWESFNDTS 60 V LA C VGP++ +P P + +++ + D +W F D + Sbjct: 14 VTLAACAVGPDFKRPDTATAARFARDVRPATQRDAAPADTRTDTSPDADAAFWRGFGDPT 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP-------- 110 L +L+ AL N + A R +A+ + D +P+ AS I H+ + Sbjct: 74 LTRLIDAALAANQDLQVAVSRYDASNALLSQATFDRYPTITASGQIGHQLMSKDQAFGAP 133 Query: 111 ----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + T+S G +++ W++DLFG+ RR IES A ++ A V ++ + ++ +Y+ Sbjct: 134 RSQRDTPTSSVG-INAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAGEVASTYV 192 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R +ER+ IA + D K+ + L + + G S+L + A+ +S S I E + Sbjct: 193 DLRGSQERLRIARENADNQKQTLALINARVGAGRGSELDAARARAQYESTTSRIAVYEAA 252 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------INIGIPADLIRNRPDI 278 ++ H ++ L G + + +P I+ G P DL+R RPD+ Sbjct: 253 IGVDEHRLAVLTGQTPDALIGRFDLPKTGTPTGMPVPLPALAADIDPGTPGDLLRRRPDV 312 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGP 328 E +L + A++G+A +DL+P +L+G + T F G +T+ WSF Sbjct: 313 AAAEARLHAATARVGVATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDWSF-- 370 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 D G++++ I +++ A Q +++TVL A++E ENAL + + L Sbjct: 371 ------LDVGRVRARIAASDAEAAGQLAQYRQTVLGALEETENALLRVARTRDETAHLVR 424 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A + ++ L+ + G ++LD +R + + + + + A S V LY A+ Sbjct: 425 AADDSARAAQLAQARFSAGAIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYKALAG 484 Query: 449 GY 450 G+ Sbjct: 485 GW 486 >gi|170735155|ref|YP_001774269.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169821193|gb|ACA95774.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 498 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/459 (26%), Positives = 216/459 (47%), Gaps = 45/459 (9%) Query: 18 C-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 C +VGP+Y P PL N L++ D + WW+ ++D L+ LV+ AL Sbjct: 22 CKSVGPDYKLPQHAYVNAPLANHALDDANGA-LVSRDAVPGNWWQLYDDPVLDGLVRDAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------------I 109 + N + R+ AA N+ RA L F S + R + Sbjct: 81 KSNTDL-----RVAAA--NLARSRAALVVANEQGGFSGSAEAAVQRAQESAEQYLLENKL 133 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + + G ++ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y++A Sbjct: 134 PVVNEGTVG-INVSYELDLFGKLRRGVEAARADSEAVKAAGDLARITVVADVVRAYVEAC 192 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++IA Q L L ++ ++LS G ++ + + +++++ +DIP E R Sbjct: 193 SAGDELAIAKQSLALQQQRVKLSQRLRDAGRGNQTDVTRGVTQVRTLSADIPRFEG--RR 250 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 V P L PI IG A L+R RPD+R E++LA + Sbjct: 251 KVAQYQLAALLARAPADLPKAAAECERLPKLRQPIPIGDGAALLRRRPDVREAERQLAAA 310 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A + LYPS+S+ GS+ + D F WSFGP + G+ ++ +R Sbjct: 311 TARIGVATAALYPSVSIGASAGSVGVAAD-LFSSTTNRWSFGPLISWSFPVTGQ-RARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ + VLNA++E +++L + D + L+ A E + S + Y Sbjct: 369 EAEAATGGALAHFDGVVLNALRETQSSLATYAADVQRTDALRTAYESARNSADETHRLYA 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 GR S + LD R V ++ A+ Q+A V L++ Sbjct: 429 AGRESFISDLDATRTLTSVRAQVAAAEGQVAADQVRLFL 467 >gi|282850662|ref|ZP_06260041.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Veillonella parvula ATCC 17745] gi|282580155|gb|EFB85559.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Veillonella parvula ATCC 17745] Length = 566 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 112/426 (26%), Positives = 204/426 (47%), Gaps = 30/426 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------- 103 WW+ FND L++L+ + L+ N + A R+ + + A P AS Sbjct: 127 WWKVFNDPVLDQLIDLTLKNNRQLEVARSRVRQGRLQLGIAEAQRLPWLDASGSWSANRG 186 Query: 104 ---------------ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYA 147 IS + N++T G +D+ W+ID+FG+++ + +N L ++ A Sbjct: 187 QGEWDSDREAIKNLPISDKMTRNVETGKLG-IDARWEIDIFGRQKAKSRAASNSLQASQA 245 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + +++ ++ Y+ R +E++ I + + ++ +EL + + G ++L + + Sbjct: 246 DLYSTWVSLSAETALQYMSLRTLQEQLRITEEDVKRQQEALELIKINYQSGIINELPVQQ 305 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + +++IP+L+K+ + +S L G E + + N P + + IGI Sbjct: 306 ATYALSQTQAEIPSLKKNIASTMSALSILTGTVPGEIDGLLME--NTSLPTVDPHMFIGI 363 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHW 324 PA+ +R RPDI+ E+++A K AK+DL P SLNGSI L +S Sbjct: 364 PAEALRQRPDIQAAERRIAAQQQKTKAAKADLKPRFSLNGSIGLESFSSGGLISAIGKMI 423 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP + +PIF+ G I+ NI+ QE ++ETVL A+ EV NA+T ++D Sbjct: 424 GIGPSITMPIFNAGAIRKNIKVQTEKEQEYLALYEETVLKAVGEVRNAVTDASQDHIKSE 483 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L+ AVE +++ SL+ N+ G L +LD R +++ Q V L+ Sbjct: 484 ELKSAVESAQQAESLAQTNFDSGLSDYLSVLDARRNVLSARRQYIMSRGQEFADTVRLFK 543 Query: 445 AIGSGY 450 ++G G+ Sbjct: 544 SLGGGW 549 >gi|300691259|ref|YP_003752254.1| outer membrane lipoprotein, efflux system [Ralstonia solanacearum PSI07] gi|299078319|emb|CBJ50968.1| outer membrane lipoprotein, efflux system [Ralstonia solanacearum PSI07] Length = 490 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 221/464 (47%), Gaps = 32/464 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y KP P P +F ++ D WW F D L + V++AL+QN Sbjct: 22 GCAVGPDYVKPDAPA-PERFQGQTAVEQRTANAAADLSAWWAGFGDQQLTQFVQLALEQN 80 Query: 73 LTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS + R +++T NS D Sbjct: 81 LDLAQAFARVTQARAGLGAANAALLPSGNVTGQAARAYQSVETPLGRVLNSRPGFDRYGN 140 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 141 AFEADANASWELDVFGGLRRGREAALADYQASQAGAVATRLAVAAQTADIYITIRGLQTR 200 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + +L + +G ++L + + E + + + IP LE ++ + Sbjct: 201 LEVARHQVKTQEDLLSTVNLLYGKGLAAELQMRQAEGALAQVRASIPQLEAGLDAAMNAL 260 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + Q P + I G P +L+R RPD+ E++LA S A+I Sbjct: 261 DVMLGSLPGTHRVELAQGGDIPAAPQIAIS---GSPGELLRRRPDLIVAERRLAASNARI 317 Query: 293 GIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL G + ++ + F + ++ L +FD G+I + I +A+ Sbjct: 318 GVAIAEYYPKFSLGGLLGSATSVGAGSLFGSGASQFAGVLGLRWRLFDFGRINAQIDQAK 377 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ VL A ++VE+A +++ + ++ L V+ ++ + S Y++G Sbjct: 378 GQEAEMLAAYRLAVLRATEDVEDAFSALVKREEQAAVLTQGVDSLGRARNASFAAYQKGV 437 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 SL+++L + + + + A+ + A++ V + A+G G+ P Sbjct: 438 VSLIEVLQADESLLRASDARAQAQTESARAAVAAFKALGGGWQP 481 >gi|162146815|ref|YP_001601276.1| outer membrane protein oprJ [Gluconacetobacter diazotrophicus PAl 5] gi|161785392|emb|CAP54940.1| putative outer membrane protein oprJ [Gluconacetobacter diazotrophicus PAl 5] Length = 513 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 117/485 (24%), Positives = 226/485 (46%), Gaps = 58/485 (11%) Query: 18 CTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 CTVGP+Y KP + P + S + + +WW + D L L + NL Sbjct: 13 CTVGPDYHKPDLASAPHWRRGMADAESHPVESPADPQWWTIYRDPVLTALEQQVASANLD 72 Query: 75 ILQATERINAAKENILSVR---ADLFP-----SSYA------------------------ 102 + + R+ E+I R A FP +SYA Sbjct: 73 LRASAYRL---AESIAERRIASAAQFPHMEGNASYARERASTNGILGLLGTLERAGAGDV 129 Query: 103 -SISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 S + F P + G + + W++DL+G RR +E++ A + + Sbjct: 130 ASGAQGFGPVAVPGTVGNPSFNLPQYGMSASWEVDLWGHVRRQVEAANAAVQATQDMQRD 189 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 ++++++ Y+D R + +I+I + +D+ + +++L+ ++FTQGA+++L + + Sbjct: 190 VLVSLMAETAQDYLDLRGVQAQIAIVDRNIDIARHSVDLTAMRFTQGASTQLDVADSRGQ 249 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 + +S +P L VH I+ L A E ++ Q P +P + +G+P+ Sbjct: 250 LSEFQSRLPILRS---QEVHLINALSFLVARE-PGALRAQLGTPAPIPPVPDAVPVGLPS 305 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSF 326 +L RPDIR E++L + A IG+A +D +P ++L+GS+ AL + + F Sbjct: 306 ELAERRPDIRMAEEQLHVATASIGVAVADFFPRVTLSGSLDVQALQFSGLGSWASRQYGF 365 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 GP + LP+F+ G++ +R + +E IT Q T+L A +E+++A+ + ++ +L Sbjct: 366 GPTMTLPLFEGGRLTGQLRLRRAQQKEAAITLQRTILKAWQEIDDAMADFSAAQQQRDRL 425 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + V ++ ++ L+ Y QG L++L ++ A + L + ++ + LY A+ Sbjct: 426 KETVAQNETAVRLAQQQYVQGASDFLNVLTLQNALLASQNQLVQSTTAVSVAVARLYRAL 485 Query: 447 GSGYN 451 G G+ Sbjct: 486 GGGWE 490 >gi|58040530|ref|YP_192494.1| Outer membrane channel protein [Gluconobacter oxydans 621H] gi|58002944|gb|AAW61838.1| Outer membrane channel protein [Gluconobacter oxydans 621H] Length = 503 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 119/490 (24%), Positives = 219/490 (44%), Gaps = 67/490 (13%) Query: 18 CTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 CTVGP+Y +P H L P + + ID +WW ++D +L L + Sbjct: 22 CTVGPDYHRPDPHAPAHWHQSLAP---EASHPQETSAIDA-QWWRIYHDPTLTALEEDVA 77 Query: 70 QQNL---------TILQATERINAAKE---------------------NILSVRADLFPS 99 + NL T QA RI +A + +L P Sbjct: 78 RNNLDLREAALHFTESQAERRIASAAQMPHMEGAASYARERASTNGILGLLGTTQQAGPG 137 Query: 100 SYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQV 149 AS F P + G L + W++D +G RR IE++ A A + Sbjct: 138 EIASGEQGFGPAAADGAKGNPSFNLPQYGLSASWEVDFWGHVRRQIEAATA----AMHET 193 Query: 150 DIAKLNVISKLIPS----YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 D + +V+ L+ Y++ R+ + +I I Q +D+ + +++L+ L+F QG +KL + Sbjct: 194 DELRRDVLVSLMAETAQDYLNLRNIQTQIGITQQSIDIARHSVKLTELRFAQGTATKLDV 253 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK-QSNNFQPNLYIPIN 264 ++ E+ +P L+ VH ++ L A E ++ S P + I Sbjct: 254 AYSRGQMHGFEARLPVLKS---QEVHLVNALSFLTAREPGALKERLGSRQTIPPVPDIIP 310 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYN 321 +G+P++L RPD+R E L + A IG+A +D +P ++L+GS+ AL + Sbjct: 311 VGLPSELAERRPDVRAAEDHLHAATASIGVAVADFFPRVTLSGSLDIQALQFSGLGSWAS 370 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + FGP + LP+F+ G++ + + +E I Q T+L A +EV++++ ++ ++ Sbjct: 371 RQYGFGPTMTLPLFEGGRLTGQLHLRRAQQKEAAIALQRTLLKAWEEVDDSMADLSAAQE 430 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 +L+ V + ++ ++ + Y QG L++L + A L+ + ++ S Sbjct: 431 RRKRLEETVSEDETAVHIAQLQYSQGAGDFLNVLTTQNALLASRSALAESSAGVSVSVAH 490 Query: 442 LYIAIGSGYN 451 LY A+G G+ Sbjct: 491 LYRALGGGWT 500 >gi|241665000|ref|YP_002983360.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12D] gi|240867027|gb|ACS64688.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 514 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 123/465 (26%), Positives = 223/465 (47%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ P +++ +N L W E F D L Sbjct: 22 VLSGCSMAPTYERPDAPITSAYPQAPAGYAVPADSAKPGENAPRATELGWREFFPDARLQ 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKT----- 114 KL+ +AL+ N + A + AA+ ADL P AS ++ P++ T Sbjct: 82 KLIGLALENNRDLRVAMLNVEAARAQYRLQIADLLPPVNASATYTRSHTPPSISTTGGDI 141 Query: 115 -NSTGQLD---SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N QL S+++++LF S+ A+ + A++++IS++ +Y++ R + Sbjct: 142 YNKQYQLGVGISNYQVNLFSVGDVTSSARASYLATDEGRRAAQISLISQVAKAYLNERAY 201 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ +A Q L + +L+ +F GA+S L L + E ++S+ + L + + Sbjct: 202 AEQLDLAQQTLKGREDYYKLAKQRFDVGASSALDLRQTETLVESVRVSVAQLTRQYAQAT 261 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P L S+ + I G+P++L+ RPDIR E+KL + A Sbjct: 262 NALVLLVGAPLPADLPAPTTVSSE---KIVADIPPGLPSELLEQRPDIRQAEQKLIAANA 318 Query: 291 KIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +PS+ L ++ HD F WSF P L LPIF+ G N+ Sbjct: 319 NIGVARAAFFPSIGLTSNVGTASGALHD-LFKSGTQFWSFVPNLTLPIFNWGTNIFNLDL 377 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + +++T+ A +EV +AL + ++ V + + ++LS YR Sbjct: 378 TKTNQKIAVANYEKTIQTAFREVSDALVARGTLEEQVAAQKRFRDATADRLTLSDQRYRN 437 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 438 GVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 480 >gi|221198722|ref|ZP_03571767.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221204984|ref|ZP_03578000.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221174775|gb|EEE07206.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221181173|gb|EEE13575.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 568 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 119/479 (24%), Positives = 216/479 (45%), Gaps = 78/479 (16%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN--------------SKNLINIDT-LKWWESFN 57 LL CTVGP++T P + ++ S + D +WW +F Sbjct: 29 TLLGACTVGPDFTPPRADVPAGWHALQRADAAAPASGARAPASTPTTDADPDPRWWRAFG 88 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------FI 109 D L++LV+ A + NL + A RI A+ + + A P AS S++ F+ Sbjct: 89 DPLLDRLVERAARDNLDVQAAVLRIAQARAQVRAAAAQGLPDVRASASYQREQLGLKGFV 148 Query: 110 PN---------------------------LKTNSTGQLDS--------------DWKIDL 128 + ++ + G LD+ W++DL Sbjct: 149 EDQGLDRQIDRLGAPGSPLDRLGAGTGAAVQQRARGALDALESPVNLWQAGFDASWELDL 208 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ RR +E++ A +A A D A L++ +++ +Y+ R + + ++A +++ ++ Sbjct: 209 FGRVRRAVEAADAQAGAAVASRDDALLSLEAEVAQTYLQLRGAQTQRALADELVGAQREL 268 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +L+ + G S L + +A + + + +P ++ + + ++ L+G + Sbjct: 269 RDLTREQAAHGLASDLDVRSADARLAQLRAQLPQFDQQIVLLKNGLAYLVGGAPGALDDW 328 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 + + P + + +G+P+ L R RPDIR E L + A +G+A + YP +SL G Sbjct: 329 LD--TPRALPGVPPAVPVGLPSTLARRRPDIRRAEADLHAATADVGVAVAQFYPDVSLTG 386 Query: 308 SIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 + L TH HWS FGP + LPIF G + SN+R ++ E + +++ Sbjct: 387 QVGLRATHVREL----AHWSHLFYAFGPAVSLPIFSGGALVSNLRLTQARQAEAALAYRQ 442 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 TVL A+++V+NAL D+ L AV + ++ L+ YR+G LD+LD ER Sbjct: 443 TVLVALRDVDNALAVYRTDQTRAAALDDAVRAEQGALELARDRYRKGLSPFLDVLDAER 501 >gi|265764006|ref|ZP_06092574.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_16] gi|263256614|gb|EEZ27960.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_16] gi|301163394|emb|CBW22944.1| putative outer membrane exported protein [Bacteroides fragilis 638R] Length = 468 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/422 (23%), Positives = 205/422 (48%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN ++L A +RIN AK N+ R + FP+ ++ + Sbjct: 51 QWWKAFQDPVLDSLISVAVKQNYSVLTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 108 Query: 111 NLKTNST------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T L+ W++DLFG R +++ N ++ + +++ Sbjct: 109 QQSSGNTSDLPQSTQHYYDASLNMSWELDLFGSIRNRVKAQKENFAASKEEYTGTMISLC 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 169 AQVASAYINLRELQQELAVVQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 228 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + P+ PI +G+PADL+ RPD Sbjct: 229 SIPQIESGINQYITTLAILLGTYPQEVRPALTAPGT--LPDYMEPIGVGLPADLLLRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 287 IRSAERSVNAQAALVGASKSDWLPQVFLKGSVGYAAKDLKDLTHHKSM-----TYEIAPA 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL A++E +NA+ + K + L+ Sbjct: 342 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREV 401 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 402 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 461 Query: 450 YN 451 ++ Sbjct: 462 WS 463 >gi|209543857|ref|YP_002276086.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209531534|gb|ACI51471.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 521 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 120/490 (24%), Positives = 229/490 (46%), Gaps = 56/490 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++LL+ CTVGP+Y KP + +P S + +WW + D L L + Sbjct: 15 MLLLSACTVGPDYHKPDLASVPHWHRGLPDAESHPEESPADPQWWTIYRDPVLTALEQQV 74 Query: 69 LQQNLTILQATERI--NAAKENILSVRADLFP-----SSYA------------------- 102 NL + + R+ + A+ I S A FP +SYA Sbjct: 75 ASANLDLRASAYRLAESLAERRIAS--AAQFPHVEGNASYARERASTNGILGLLGTLERA 132 Query: 103 ------SISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAY 146 S + F P + G + + W++DL+G RR +E++ A + + Sbjct: 133 GAGDVASGAQGFGPVAVPGTVGNPSFNLPQYGMSASWEVDLWGHVRRQVEAANAAVKATQ 192 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 ++++++ Y+D R + +I+I + +D + ++ L+ L+F QGA+++L + Sbjct: 193 DMQRDVLVSLMAETAQDYLDLRGVQAQIAIVGRNIDTARHSVVLTGLRFAQGASTQLDVA 252 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--IN 264 ++ +S +P L+ VH I+ L A E ++ Q P +P + Sbjct: 253 DSRGQLSEFQSRLPILQS---QEVHLINALSFLVARE-PGALRAQLATPAPIPPVPDAVP 308 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYN 321 +G+P++L RPDIR E++L + A IG+A +D +P ++L+GS+ AL + Sbjct: 309 VGLPSELAERRPDIRMAEEQLHVATASIGVAVADFFPRVTLSGSLDVQALQFSGLGSWAS 368 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + FGP + LP+F+ G++ +R + +E IT Q T+L A +E+++A+ + ++ Sbjct: 369 RQYGFGPTMTLPLFEGGRLTGQLRLRRAQQKEAAITLQRTILKAWQEIDDAMADFSAAQQ 428 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 +L+ V ++ ++ L+ Y QG L++L ++ A + L + ++ S Sbjct: 429 QRDRLKETVAQNETAVRLAQQQYVQGASDFLNVLTLQNALLASQNQLVRSTTAVSVSVAR 488 Query: 442 LYIAIGSGYN 451 LY A+G G+ Sbjct: 489 LYRALGGGWE 498 >gi|209543957|ref|YP_002276186.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209531634|gb|ACI51571.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 507 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 120/479 (25%), Positives = 223/479 (46%), Gaps = 50/479 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTS 60 L +LAGCTVGP Y M L P T I + N + WW F D Sbjct: 17 LAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIART----NAELKDWWHRFGDAE 72 Query: 61 LNKLVKIALQQNLTILQATERINAAK---------------------ENILSVRADLFPS 99 L++LV A+ N + A +RI A + ++ S+ D +P Sbjct: 73 LDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPL 132 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 ++R P S G + + W+ID+FG+ RR +E+S ++ + + ++S Sbjct: 133 RPGDPANR--PGASYLSYG-VSASWQIDVFGRIRRAVEASEHAVEENVEERRAVLMTMLS 189 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ Y+ R + R+ I+++ + + ++ +L+ + +G + L + + +AE+ + ++ Sbjct: 190 SLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAKAELDAQQAA 249 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 L H I L+G P T + + +P +P +P+ ++ NRP Sbjct: 250 REPLRTHIAQITHAIDVLMGQVPGT-----TEAELKVARPLPQVPEFPATVPSIVLGNRP 304 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 DIR E+ A++ A+IG+A + +YP+ L+ N + + + F W F L Sbjct: 305 DIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMY-QVFEAGALSWQFFMLASL 363 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ GK+ IR A+++A+ +T+++TVL A +EVE+A+ + ++D + L A E Sbjct: 364 PLMHGGKLTGQIRTAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRAAED 423 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Y G L++L ER E ++A+ + + +DLY A+G+G+ Sbjct: 424 SRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAGWQ 482 >gi|218779293|ref|YP_002430611.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfatibacillum alkenivorans AK-01] gi|218760677|gb|ACL03143.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfatibacillum alkenivorans AK-01] Length = 514 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 125/485 (25%), Positives = 219/485 (45%), Gaps = 52/485 (10%) Query: 7 IFSLFIVLLAGC-TVGPEY-------TKPHM-----PLLPTQFSIGNSKNLINIDTLKWW 53 +F+L + GC GP+Y P + PL P + S+ D+ WW Sbjct: 26 VFALIFICFCGCIKAGPDYQSGSGAAVAPGLYVNQEPLRPEK-----SEKTPYTDS--WW 78 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 N+ LN LV+ AL N I A R+ + + RA LFPS S + Sbjct: 79 TGLNNPELNALVEEALANNPDIRAAAARVLEYRAVLAQARAGLFPSVSLSGEGSWSEATS 138 Query: 114 TNSTGQLDSD-----------------------WKIDLFGQ-RRHIESSLANLDSAYAQV 149 T+ST L S +++DL+G+ R E++ A+L + Sbjct: 139 TSSTPVLTSQGISYVRRERDVHSTSLDLTAAASYELDLWGRIARSNEAARADLLAVEENA 198 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + ++ + +Y++ + + RI+I + ++ +K+N+ ++ G S L L + Sbjct: 199 RTVAQTIAAETVSAYLEIENLRRRIAITQESIEDFKRNLSFIQRRYEGGIASVLDLRQAR 258 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + ES +P L + + ++ L G YP EF + K P P+ G+P Sbjct: 259 RLLAQAESLLPPLRRDMKAKAAALAVLAGKYPNLEFTRKIPKDYYKALP----PVPPGLP 314 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ RPD+R E L + A+IG+A++ +PS+SL G++ + ++ F N W+ Sbjct: 315 SDLLLRRPDVRQAEAGLQAASARIGVARAARFPSISLTGALGTSSPDLEDLFSPENRFWN 374 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L PI+D G++K+ A + + + +TVL+A EVE+AL + E ++ Sbjct: 375 LAAGLLAPIYDAGELKAAEEAARARFAREEAAYAKTVLSAFAEVESALAAQKEQREYREL 434 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L VE + + Y QG + LD+LD ++A + L ++ + + V LY A Sbjct: 435 LLKLVEESAATRETAQSRYEQGLSTYLDVLDAQQALYSAQQTLINSELAIYLNRVTLYRA 494 Query: 446 IGSGY 450 +G G+ Sbjct: 495 LGGGW 499 >gi|78066239|ref|YP_369008.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77966984|gb|ABB08364.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 485 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 114/456 (25%), Positives = 215/456 (47%), Gaps = 27/456 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSK------NLINIDTLKWWES-FNDTSLNKLVKIAL 69 GCT+ P Y +P P+ T + S + N L W + F D +L + AL Sbjct: 24 GCTLAPRYERPAAPVPATYAPVDGSAAPAAEVSPANAALLDDWRTYFTDAALQAWIDAAL 83 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNS------TGQ 119 N + A R+ A+ RADL PS A++ + ++ P ++ ++ G Sbjct: 84 ANNRDLRVAAGRLEEARALYGVQRADLMPSVDANLGYDRARQYDPVVRESAISGLYRAGV 143 Query: 120 LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S +++DLFG+ R + +++LA +A AQ + ++ VI+ + +Y+ R E++++A Sbjct: 144 GVSAYELDLFGRVRSLSDAALAEYFATANAQRTV-RIGVIADVAGAYVSERSLHEQLALA 202 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + LD ++ L+ ++ G + + L E + S + LE+ +V + L Sbjct: 203 QRTLDARQRMAALTQRRYAAGTSDAIELRSAEMLVASARASQAALEREHAQSVRALQLLA 262 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G +F+ + P+ G P+ L+ RPDIR E +L + A+IG A++ Sbjct: 263 G----DFVRNVPDDMTALDTLSIAPVAPGAPSTLLERRPDIRQAEARLKAANAQIGAARA 318 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P ++L GS++ + F G + W+F P+L LPIF G+ ++N+ A + Sbjct: 319 AFFPRITLTSDYGSVSDAFSSLFTGGTSVWTFAPRLTLPIFAGGRNRANLDVANARKHIA 378 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TV A +EV +A + + + + Q + L+ Y G + L++ Sbjct: 379 VADYEKTVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVATYLEL 438 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+T + +L K+ + + LY A+G G+ Sbjct: 439 LDAQRSTYESGQELIRLKQLRLANAITLYRALGGGW 474 >gi|66046610|ref|YP_236451.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63257317|gb|AAY38413.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 477 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 127/471 (26%), Positives = 218/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQMVGPDYQVPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA LDL K+++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARASLDLQKQSVSLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P + + +G A L++ RPD+R E Sbjct: 243 EARRQAAIFRLSMLLAKPVEQLPAGV--STCNQLPQIAQVMPVGDGAALLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + +++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAREAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|317483787|ref|ZP_07942728.1| outer membrane efflux protein [Bilophila wadsworthia 3_1_6] gi|316924980|gb|EFV46125.1| outer membrane efflux protein [Bilophila wadsworthia 3_1_6] Length = 532 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 128/490 (26%), Positives = 223/490 (45%), Gaps = 76/490 (15%) Query: 32 LPTQFSIGNSKNLI--NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI 89 +P ++ G+ ++ + N+ WW+SFND +LN+LV A + TI A +I + Sbjct: 4 MPEKWDAGDPQHPLVGNVSLDTWWQSFNDPALNQLVTRARLSSPTIEAALLKIVQYRAQY 63 Query: 90 LSVRADLFP------SSYAS--ISHRFIPNLKTNSTGQ----------LDSDWKIDLFGQ 131 FP +Y+S S R + Q + W+ID++G+ Sbjct: 64 AIAIGSFFPQTQELTGTYSSEHPSRRSADAPQPGEPSQPGTIQQLNLGFQATWEIDIWGK 123 Query: 132 -RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 RR+ E++ A L A+A ++A + + + + Y R ++++ IA + K+++ L Sbjct: 124 YRRNAEAAKAALQGAHAGYELALVTLSADVAQQYFSYRMTEKQLEIARRNSLAQKESVRL 183 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP---------- 240 + F GA+S + A K+ E+DIP LE N + + LLG P Sbjct: 184 TEAMFRLGASSGRDYDQAVAMQKNTEADIPQLEAQLITNRNALCVLLGIPPGPIPELAPG 243 Query: 241 ----------------------------ATEFLHYMQKQSNNFQPNLYIPINI--GIPAD 270 AT + QS +IP++I G+PAD Sbjct: 244 WVPQPPQTASGAALASSVSTAGKTLPQGATPYAAERTAQS-------FIPLDIAIGVPAD 296 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--------ALTHDNSFPGYNT 322 L+R RPD+R E++ A A+IGI K+ L+PS S++G + A T ++F Sbjct: 297 LLRRRPDVRQAEQEAAAQCARIGINKAALFPSFSISGFLGFQGSDVGAFTLGDTFSHNAF 356 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 S P L LP + G++ + +R ++ Q+ +T+++TVL A++E ENA++S ++ Sbjct: 357 TASASPSLVLPFLNYGRLYNAVRAQDAVFQQSLVTYKQTVLQALQEAENAMSSFIRSRQR 416 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +T LQ A E +S L++ Y G ++ + + E ++ A A V L Sbjct: 417 LTLLQQAAEAAGRSTKLALEQYNAGSTDFTTVVSAQTTQYQQENSVAAAAGNTALQAVAL 476 Query: 443 YIAIGSGYNP 452 + A+G G+ P Sbjct: 477 FRALGGGWQP 486 >gi|94309456|ref|YP_582666.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93353308|gb|ABF07397.1| Cation/multidrug efflux system outer membrane porin [Cupriavidus metallidurans CH34] Length = 497 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 131/480 (27%), Positives = 229/480 (47%), Gaps = 55/480 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS---------IGNSKNLINIDTLK---WWE 54 + +L LL GC VGP+Y +P P+ P F G+ K D + WW Sbjct: 15 VVALACALLTGCAVGPDYQRPDAPV-PKAFKEASEDMPAWTGDWKTAEPQDIMARPDWWR 73 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F+D L+ L+ N I A + A ++ + RA FP+ A+ + T Sbjct: 74 VFDDPVLDALMSQVKISNQNIKAAEAQYRQATASLSAARAGYFPTVGANAG---VSRGAT 130 Query: 115 NSTGQ--------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +S GQ L ++W+ID++G+ RR +ES+ A ++ A + L+ + L SY Sbjct: 131 SSNGQIINGQNLTLSANWEIDVWGRVRRQVESAQAGAQASEADLASILLSTQATLAQSY- 189 Query: 166 DARHFKERISIA-HQILDL----YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 F R++ A H +LD Y K+++L ++ G + +++ E ++KS ++ Sbjct: 190 ----FLLRVADAQHALLDRTVADYAKSLQLVQNQYKAGTAQRSDVLQSETQLKSAQAQQL 245 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIR 279 ++ + + H I+ L+G P + + IP + + +P+ L+ RPDI Sbjct: 246 DIQITRQQLEHAIAVLVGKPPADLTVATVDNRD------AIPRVPVAVPSQLLERRPDIS 299 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPI 334 E+++A + A IG+A++ YP+LSL+ + LT S P + WS G L + Sbjct: 300 AAERRMASANANIGVAEAAYYPTLSLSATGGLTASTLARWLSLP--DRVWSIGAGLAGTV 357 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVEL 392 FD G ++N A + + +++TVL A +EVE+ L S + E + IV A+ Sbjct: 358 FDGGLRRANTAIAVAQYDQTVANYRQTVLGAFQEVEDNLASARVLEQESIVQN--DALRS 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++SL Y+ G +LLD+L + A E L+I RQ + + L A+G G++ Sbjct: 416 AREALSLVNNRYKAGTAALLDVLTAQTAAYTAENTTLTIMGRQYTAA-ITLIKALGGGWH 474 >gi|330951883|gb|EGH52143.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 490 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 130/480 (27%), Positives = 235/480 (48%), Gaps = 36/480 (7%) Query: 4 LRAIFSLFIV----LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWE 54 +R I + +V LL+GC VGP+Y +P PL P ++ + + NI + WW+ Sbjct: 1 MRPICTYVLVMSTGLLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPPVSAAWWD 58 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-YASISHRFIPNLK 113 F+D L+ V AL QNL + QA R A+ + A L PS + + R +++ Sbjct: 59 GFDDPLLSSFVSRALAQNLDLAQARARFAQARAGADAATAALLPSGNIDAQTARAQQSVE 118 Query: 114 T------NST-----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 T NST L + W++D+FG RR +++LA ++ A V A+L Sbjct: 119 TPLGQVLNSTPGYDRYGNSYEANLTASWELDVFGGLRRSRQAALAEYQASQAGVAAARLA 178 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V ++ +YI R + R++IA++ + + +E L +G + + ++EAE+ + Sbjct: 179 VAARTADTYITVRGLQARLAIANRQVKTRQDLLEKVQLLHERGLSPEYEARQIEAELLQV 238 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ +P L+ ++ + +LG P H P+ + G PADL+R R Sbjct: 239 QATVPILQTGLDATMNALDVMLGVPPGT--HRSSLAETGRIPHAPELTSTGTPADLLRRR 296 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLY 331 PD+ E++LA S A+IG+A S+ YP LSL+ + A++ N F + + L Sbjct: 297 PDLIVAERRLAASNARIGVAISEYYPKLSLSALLGSATAVSSSNLFTDGASQSAGILGLR 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD G++ + IR+A+ E ++++VL A ++VENA +S+ + L Sbjct: 357 WRLFDFGRVNARIRQAKGQEAEALAAYRQSVLRATEDVENAFSSLTSRETQAAMLGKGET 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + S +Y +G SL+++L + +V + A+ + A++ V ++ A+G G+ Sbjct: 417 ALASARQSSFASYSKGAASLIEVLRADEKMLQVADAKAQAQVESAQAAVAVFKALGGGWQ 476 >gi|326402785|ref|YP_004282866.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] gi|325049646|dbj|BAJ79984.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] Length = 519 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 234/497 (47%), Gaps = 62/497 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFS-IGNSKNLINIDT-------LKWWESFNDTSL 61 L + L GC +GP + H P T S + N L + DT L WW+SF+D +L Sbjct: 21 LAALALGGCELGPNF---HAPRTRTAASFLANRPALTSPDTVSQGKVDLAWWQSFDDPAL 77 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTG-- 118 L A+ +NL + ATER+ A+ A L+P+ S S+ R P+ K T Sbjct: 78 TTLEHEAIARNLDVKAATERLAEAEAQAQIEGAALYPNLNFSGSYTREKPSNKGVFTALS 137 Query: 119 ----------------------------------------QLDSDWKIDLFGQ-RRHIES 137 S + DL+G+ RR +E+ Sbjct: 138 GGGSTSTSTNAGSTASGSSTSIGGGGLPGSELQPFNLFQYGFSSVFDFDLWGKNRRAVEA 197 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 SLA + ++ LN +++ YI+ R + ++I + L + L+ + Sbjct: 198 SLAAVQASRDARRAVLLNTEAEVAHDYINLRAQQAVLAITRRNLASAEHIANLTRQREQA 257 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G + L + +A+ +S+ + IPTL + +++ +S LLG E L Q + P Sbjct: 258 GLANALDVADAQAQAESVRAQIPTLRTAIAADINQLSLLLG-EGPEALR-AQLVTAKPIP 315 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + + IG+P+ L++ RPDIR +L + A+IG+A + +P +SL GS++L F Sbjct: 316 PVPPVVPIGLPSQLLQRRPDIREATARLHQATAEIGVATASFFPDISLAGSVSL-QALQF 374 Query: 318 PGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 N ++ GP++ +P+F+ G+++ + ++ +E + + +TVL A +V+NAL Sbjct: 375 SNLNQLSAVTYAIGPQITMPLFEGGRLRGELHLRKAQQREAAVNYAKTVLTAFHQVDNAL 434 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 T+ +E++K LQ V ++++SL+ YR+G L +L +++ E + ++ Sbjct: 435 TAYDEEQKTQAALQADVTQTRRALSLAQERYREGLIDYLQVLTAQQSELAAEQAQAQSQA 494 Query: 434 QLAKSYVDLYIAIGSGY 450 +++ V LY A+G G+ Sbjct: 495 KISTDLVSLYQALGGGW 511 >gi|134291288|ref|YP_001115057.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134477|gb|ABO58802.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 647 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 220/505 (43%), Gaps = 73/505 (14%) Query: 14 LLAGCTVGPEYTKPHMPL--------------LPTQ------------FSIGNSKNLINI 47 + GCTVGP++T P + PT S + Sbjct: 28 MFGGCTVGPDFTAPKADVPANWHDVQGGAAASTPTSTPTPGASAAAPPAERARSSPVTGA 87 Query: 48 DT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 D +WW +F D L++LV A NL + A RI A+ + + A P+ AS S+ Sbjct: 88 DPDPRWWRTFGDPLLDRLVARAAHDNLGLQAAVLRIAQARAQVHAAAAQGLPNVRASASY 147 Query: 107 RF-----------------IPNLKTNST---------------GQLDSDWKIDLFGQ-RR 133 + I L D+ W++DLFG+ RR Sbjct: 148 QREQLGLRGIIDEQGVEQRIAGLGGPGARGAIDALEAPVNLWQAGFDASWELDLFGRVRR 207 Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 +ES+ A +A A D A L++ +++ +Y+ R + + ++A ++ + ++L+ Sbjct: 208 SLESADAQASAAVASRDDALLSLEAEVAQTYLQLRGAESQRALADELERAQRDLLDLTRE 267 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G S L + +A + I + +P ++ + + ++ L+G ++ + Sbjct: 268 QAAHGLASDLDVRSADARLAQIRAQLPQFDQQIVLLRNALAYLVGGAPGALDDWLA--AP 325 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-- 311 + P + + +G+P+ L R RPDIR E L + A +G+A + YP +SL G + L Sbjct: 326 HALPQVPPIVPVGLPSTLARRRPDIRRAEADLHAATADVGVAVAQFYPDISLTGQVGLRA 385 Query: 312 THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 H HWS FGP + LPIF G++ SN+R +++ E + +++ VL A+ Sbjct: 386 AHVREL----AHWSHLFYSFGPAVSLPIFAGGQLVSNLRLSQARQAEAALAYRQAVLVAL 441 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 ++V+NAL D+ L AV + ++ L+ YR+G LD+LD ER ++ Sbjct: 442 RDVDNALAVYRTDQTRAAALDDAVRAEQGALELARDRYRKGLSPFLDVLDAERQWSEGRQ 501 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 Q V LY A+G G+ Sbjct: 502 QAVQGALQTTTDLVALYKALGGGWQ 526 >gi|148259579|ref|YP_001233706.1| RND efflux system outer membrane lipoprotein [Acidiphilium cryptum JF-5] gi|146401260|gb|ABQ29787.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidiphilium cryptum JF-5] Length = 519 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 129/497 (25%), Positives = 234/497 (47%), Gaps = 62/497 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFS-IGNSKNLINIDT-------LKWWESFNDTSL 61 L + L GC +GP + H P T S + N L + DT L WW+SF+D +L Sbjct: 21 LAAMALGGCELGPNF---HAPRTRTAASFLANRPALTSPDTVSQGKVDLAWWQSFDDPAL 77 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTG-- 118 L A+ +NL + ATER+ A+ A L+P+ S S+ R P+ K T Sbjct: 78 TTLEHEAIARNLDVKAATERLAEAEAQAQIEGAALYPNLNFSGSYTREKPSNKGVFTALS 137 Query: 119 ----------------------------------------QLDSDWKIDLFGQ-RRHIES 137 S + DL+G+ RR +E+ Sbjct: 138 GGGSTSTSTNAGSTASGSSTSIGGGGLPGSELQPFNLFQYGFSSVFDFDLWGKNRRAVEA 197 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 SLA + ++ LN +++ YI+ R + ++I + L + L+ + Sbjct: 198 SLAAVQASRDARRAVLLNTEAEVAHDYINLRAQQAVLAITRRNLASAEHIANLTRQREQA 257 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G + L + +A+ +S+ + IPTL + +++ +S LLG E L Q + P Sbjct: 258 GLANALDVADAQAQAESVRAQIPTLRTAIAADINQLSLLLG-EGPEALR-AQLVTAKPIP 315 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + + IG+P+ L++ RPDIR +L + A+IG+A + +P +SL GS++L F Sbjct: 316 PVPPVVPIGLPSQLLQRRPDIREATARLHQATAEIGVATASFFPDISLAGSVSL-QALQF 374 Query: 318 PGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 N ++ GP++ +P+F+ G+++ + ++ +E + + +TVL A +V+NAL Sbjct: 375 SNLNQLSAVTYAIGPQITMPLFEGGRLRGELHLRKAQQREAAVNYAKTVLTAFHQVDNAL 434 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 T+ +E++K LQ V ++++SL+ YR+G L +L +++ E + ++ Sbjct: 435 TAYDEEQKTQAALQADVTQTRRALSLAQERYREGLIDYLQVLTAQQSELAAEQAQAQSQA 494 Query: 434 QLAKSYVDLYIAIGSGY 450 +++ V LY A+G G+ Sbjct: 495 KISTDLVSLYQALGGGW 511 >gi|255691896|ref|ZP_05415571.1| outer membrane efflux protein OprM [Bacteroides finegoldii DSM 17565] gi|260622449|gb|EEX45320.1| outer membrane efflux protein OprM [Bacteroides finegoldii DSM 17565] Length = 465 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 221/468 (47%), Gaps = 23/468 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLKWWESFND 58 MNI SLF+ L VG LP ++ + + +D WW+SF D Sbjct: 1 MNIRMWGISLFMFLSTVSAVGQTANCYLKAPLPDEWEESGQVFQQTLPVDDY-WWKSFRD 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHR 107 T L+ L+ +A+ +N ++ A RI+AA+ N+ R++ FPS + +IS Sbjct: 60 TKLDSLITLAVDRNFSVAMAINRISAARANLWMERSNFFPSVGLNAGWTREETSGNISA- 118 Query: 108 FIPNLKTNSTG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 P + G L W++D+FG R+ +++ N ++ + +++ +++ +YI Sbjct: 119 -APQSTEHYYGASLSMSWEVDVFGSIRKRVKAQKENFAASKEEYTGVMISMAAEVASAYI 177 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R F++++ + + + ++ ++++ +++ G +KL + + ++ + S + IP LE Sbjct: 178 NLREFQQQLEVVKKNVASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTRASIPQLEAG 237 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ LLG E ++ + P+ PI +G+P DL+ RPD+R E+ + Sbjct: 238 INQYITTLAVLLGMYPQEIRPVLE--TVGILPDYMEPIGVGMPVDLLLRRPDVRSAERNV 295 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A +G +K+D P + L GS + + + P L IF G++ + Sbjct: 296 NAQAALLGASKADWLPKVFLKGSFGYAARDLKDLVKSKSMTYEIAPALSWTIFSGGQLVN 355 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R A+ E + +TVL A++E +NA+ + K + L+ +++ LS+ Sbjct: 356 ATRLAKVQLDETINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREVRNQGVETLKLSLE 415 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 416 LYKQGLSPFQNVLDAQRSLLSYENQLVQAEGSSLLQLITLYKALGGGW 463 >gi|53713682|ref|YP_099674.1| outer membrane efflux protein oprM [Bacteroides fragilis YCH46] gi|52216547|dbj|BAD49140.1| outer membrane efflux protein oprM precursor [Bacteroides fragilis YCH46] Length = 468 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 100/422 (23%), Positives = 205/422 (48%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN ++L A +RIN AK N+ R + FP+ ++ + Sbjct: 51 QWWKAFQDPVLDSLISVAVKQNYSVLTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 108 Query: 111 NLKTNST------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T L+ W++DLFG R +++ N ++ + +++ Sbjct: 109 QQSSGNTSDLPQSTQHYYDASLNMSWELDLFGSIRNRVKAQKENFAASKEEYTGTMISLC 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 169 AQVASAYINLRELQQELAVVQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 228 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + P+ PI +G+PADL+ RPD Sbjct: 229 SIPQIESGINQYITTLAILLGTYPQEVRPALTVPGT--LPDYMEPIGVGLPADLLLRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 287 IRSAERSVNAQAALVGASKSDWLPQVFLKGSVGYAAKDLKDLTHHKSM-----TYEIAPA 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL A++E +NA+ + K + L+ Sbjct: 342 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLTAVQETDNAMNAYRNSIKQIVALREV 401 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 402 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 461 Query: 450 YN 451 ++ Sbjct: 462 WS 463 >gi|294794155|ref|ZP_06759292.1| RND efflux system, outer membrane lipoprotein, NodT [Veillonella sp. 3_1_44] gi|294455725|gb|EFG24097.1| RND efflux system, outer membrane lipoprotein, NodT [Veillonella sp. 3_1_44] Length = 472 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 113/426 (26%), Positives = 203/426 (47%), Gaps = 30/426 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------- 103 WW+ FND L++L+ + L+ N + A R+ + + A P AS Sbjct: 33 WWKVFNDPVLDQLIDLTLKNNRQLEVARSRVRQGRLQLGIAEAQRLPWLDASGSWSANRG 92 Query: 104 ---------------ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYA 147 IS + N++T G +D+ W+ID+FG+++ + +N L ++ A Sbjct: 93 QGEWDSDREAIKNLPISDKMTRNVETGKLG-IDARWEIDIFGRQKAKSRAASNSLQASQA 151 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + +++ ++ Y+ R +E++ I + ++ +EL + G ++L + + Sbjct: 152 DLYSTWVSLSAETALQYMSLRTLQEQLRITEDDVKRQQEALELIKINNQSGIINELPVQQ 211 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + +++IP+L+K+ + +S L G E + + N P + I IGI Sbjct: 212 ATYALSQTQAEIPSLKKNIASTMAALSILTGTVPGEIDGLLME--NTSLPTVNPHIFIGI 269 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHW 324 PA+ +R RPDI+ E+++A K AK+DL P SLNGSI L +S Sbjct: 270 PAEALRQRPDIQAAERRIAAQQQKTKAAKADLKPRFSLNGSIGLESFSSGGLISAIGKMI 329 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP + +PIF+ G I+ NI+ QE ++ETVL A+ EV NA+T ++D Sbjct: 330 GIGPSITMPIFNAGAIRKNIKVQTEKEQEYLALYEETVLKAVGEVRNAVTDASQDHIKSE 389 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L+ AVE +++ SL+ N+ G L +LD +R +++ Q V L+ Sbjct: 390 ELKSAVESAQQAESLAQTNFDSGLSDYLSVLDAQRNVLSARRQYIMSRGQEFADTVRLFK 449 Query: 445 AIGSGY 450 ++G G+ Sbjct: 450 SLGGGW 455 >gi|89901953|ref|YP_524424.1| RND efflux system outer membrane lipoprotein NodT [Rhodoferax ferrireducens T118] gi|89346690|gb|ABD70893.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodoferax ferrireducens T118] Length = 475 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 16/458 (3%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTL---KWWESFNDTSL 61 AIF LFI L+GC T + +PT +S S N +WW+ FND L Sbjct: 22 AIFPLFI--LSGCASWSARTADTPAVDVPTHWSTAVSSNNAQAPATSLAQWWQRFNDPLL 79 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNS-T 117 + LV ALQ N +IL A + A+ A L P AS S + N +NS Sbjct: 80 STLVTQALQANTSILSAQAALQQARALRDVRTAGLLPGVNASGSAQRSKSGDNDASNSFR 139 Query: 118 GQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 LD+ W+ D+FG +R + +S A+ +A + ++++ +++ +YI R + ++ I Sbjct: 140 AGLDASWEPDIFGGKRSALNASEADAQAAQTTLADVQVSIAAEVALAYIQLRGQQAQLLI 199 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A L + ++++ + G + L + + A + + IP LE S H+++ L Sbjct: 200 ARNNLASQTETLQITDWRAQAGLITSLEVEQSRASTEQTRAQIPALEASIAKTRHSLAVL 259 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G P + + P + + IPA +R RPD+R E +++ ++A++ A Sbjct: 260 TGQPPDSLQALINDPT--AVPQAAPDLALSIPAQTLRQRPDVRTAEHRISAALAQVSAAD 317 Query: 297 SDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YP S+ GS+ ALT G + + +P+FD G +S + E++ ++ Sbjct: 318 AARYPGFSIGGSLGLNALTLAGLGSGATVATALLASVSVPLFDGGAARSQVLAQEAALEQ 377 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +Q VL A+K+VE+AL ++ D+ + LQ A + ++ Y G Sbjct: 378 ARVNYQAVVLTALKDVEDALVALQGDRARLIHLQGAATAAGNADLMAQQRYSSGLIDFQT 437 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R + ++ + ++ +V LY A+G G+N Sbjct: 438 VLQTQRTLLSAQDSVASTEADVSADHVRLYKALGGGWN 475 >gi|154253877|ref|YP_001414701.1| RND efflux system outer membrane lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154157827|gb|ABS65044.1| RND efflux system, outer membrane lipoprotein, NodT family [Parvibaculum lavamentivorans DS-1] Length = 495 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 117/464 (25%), Positives = 222/464 (47%), Gaps = 26/464 (5%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLN 62 A +L V+L GC ++ P P +P+ P + +G+ + + L W F D L Sbjct: 16 ASLALSAVVLTGCMSLAPAPDTPPLPV-PEAWPAHLGSGTDGAHAGELAWQAYFTDPLLQ 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ 119 +L++ AL+ N + A R+ A R+D FP+ R +L + Q Sbjct: 75 RLIETALENNRDLRLAALRVEEASATFRIQRSDRFPAVGVGAQGGRARVPGDLNMSGRSQ 134 Query: 120 LD---------SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + S W++DL+G+ R++E ++L + ++ A L +I+++ Y+ R Sbjct: 135 VGGEYRAEVGLSTWELDLWGRVRNLEDAALQSWLASDAARQAVHLALIAQVADGYLGLRE 194 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ER++IA Q + +++ + + G+TSKL L +++ + ++ + LE++ Sbjct: 195 IDERVAIARQTVATREESYRIFRRRVEVGSTSKLDLTQVQTLLNQAQALLTQLEQARATQ 254 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H ++ L+G P + + + + + G+P++L+ +RPDI E +L S Sbjct: 255 RHALAMLVGADPGP-----LPTKVPFDETTVLAELRAGLPSELLVSRPDIIAAEHQLRAS 309 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ P ++L GS + F + W+F P L LPIFD G+ ++N+ Sbjct: 310 DAHIGAARAAFLPRIALTGSFGTASSDLNGLFDSGSRAWTFMPTLSLPIFDGGRRRANLE 369 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +E +++T+ A +EV +AL++ + + +T + +E + L+ + Y Sbjct: 370 LSEVRRDIAVAGYEKTIQTAFREVADALSAKHWLAEQLTIQRANLEAQSERARLAQLRYD 429 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++LD +R + L A+R L S V LY A+G G Sbjct: 430 NGSAAFLEVLDAQRDLLGAQQQLVQARRALLSSQVALYAALGGG 473 >gi|254497412|ref|ZP_05110211.1| outer membrane efflux protein (RND multidrug efflux) [Legionella drancourtii LLAP12] gi|254353368|gb|EET12104.1| outer membrane efflux protein (RND multidrug efflux) [Legionella drancourtii LLAP12] Length = 501 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 116/458 (25%), Positives = 215/458 (46%), Gaps = 35/458 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINI------DTLKWWESFNDTSLNKLVKIALQQNL 73 VGP Y +P P Q ++ +K ++ DT KWW+ F+D L ++ NL Sbjct: 2 VGPNYKEP-----PKQVAMHWAKKNASVKEKSFKDT-KWWQEFHDPVLTSIIYQGYHNNL 55 Query: 74 TILQATERINAAKENILSVRADLFPS--------SYASIS----HRFIPNLKTNSTGQLD 121 ++ A ++ A+ + L+P +Y I + +P+ ++ Sbjct: 56 SLQAAGVKVLRARAQLAQAVGGLYPQQQLISGSYNYTRIGGTSFQQILPSSFDTASLGFS 115 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++W++D +G+ RR I+++ A + A D A + + S + +YI R ++E+I I Sbjct: 116 ANWELDFWGKYRRAIQANDAAFLESLAAYDNALVTLTSDVATTYIKIRTYEEQIRITKAN 175 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + + K + ++ ++ G S + + + E+ E+ +P + + ++ LLG Sbjct: 176 IIVQKMGLRIARARYNAGQASLVDVEQALTELAQTEATLPANVANLQKQKDALAVLLGTI 235 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 +QK P + +GIP + + RPDI + A IG K+DLY Sbjct: 236 PNGIDSVIQKSQGI--PKAPSSVAVGIPKEALARRPDIHQARLEAVGQSASIGATKADLY 293 Query: 301 PSLSLNGSIALTHDNSFPGYNT---HWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQ 352 P+LSL+G+ A + +N T HW+ GP L PI + G+I + +R ++S Q Sbjct: 294 PALSLSGAFAFSSNNIGQSSITDIFHWANRNIVAGPSLSWPILNYGQITNAVRAQDASFQ 353 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + + VL A +EV++ +T+ E KK L A KS+ L++I Y++G Sbjct: 354 QALLNYMNVVLKAQQEVQDNITAYIEAKKAAHFLTQANTAAIKSLQLALIRYKEGETDFT 413 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+ E+ V+ L A+ + ++ V LY A+G G+ Sbjct: 414 PVLNAEQQQLSVQTSLVKAQGDIPQALVALYRALGGGW 451 >gi|114777271|ref|ZP_01452282.1| ABC-type export system, outer membrane channel protein [Mariprofundus ferrooxydans PV-1] gi|114552416|gb|EAU54899.1| ABC-type export system, outer membrane channel protein [Mariprofundus ferrooxydans PV-1] Length = 501 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 121/484 (25%), Positives = 232/484 (47%), Gaps = 51/484 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL-------------PTQFSIGNSKNLINIDTL--K 51 + + +L AGCTVGP++ +P P + + G +++ ++ + + Sbjct: 10 LMAGICLLFAGCTVGPDFRRPDAPAVSGYTREKLAEHTAAADVAGGQAQSFLSGADIPSQ 69 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI 109 WW F+ LN++V+ AL N + A + A+EN + + +PS + AS S + Sbjct: 70 WWTLFHSQQLNQMVEDALNNNPDLAAAKAALVQAQENTYAAQGVYYPSLDANASASRKKT 129 Query: 110 PNLKTNSTG-----------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 + + G +D + DLFG +RR++E+ A +S Q++ A+L + Sbjct: 130 TGSQYGNPGGRGTQFNLFNASVDVAYVFDLFGGERRNVEALAAVAESEGYQLEAARLTLT 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ + I+ + +I+ +I++ ++ +E+ +F G SK ++ + + + Sbjct: 190 SNVVTAAIEEASLRGQIAATEEIIESEQQQLEMLQKQFELGGISKSDVLAGKTRLAQTRA 249 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIR 273 +P L K + + ++ L G +P Q+ + F L +P + + +P++L+R Sbjct: 250 TLPALHKKLALIRNQLTALAGRFPE-------QESGSAFTLSALQLPQQLPLSLPSELVR 302 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSF-PGYNTHWSFGPK 329 RPDIR E +L + A++G+A + +P +S++GS +A T N F PG WS G Sbjct: 303 QRPDIRAAEAQLHTASAQVGVATAKFFPQISISGSFGSVATTTANLFSPGTGV-WSIGTN 361 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L PI G N R A ++ + +Q TVL A + V + L S+ D + + HA Sbjct: 362 LLQPILHGGSSIHNRRAAVAAYNKAAAQYQSTVLAAFQNVADVLRSLQSDAEGLQAQTHA 421 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAI 446 V+ + + ++ + G + L +LD +R+ + + L A+ A Y D L+ A+ Sbjct: 422 VQAASEQLDMARAQFSAGAINNLLLLDAQRSYEQARISLVQAQ---ASRYADTAALFQAL 478 Query: 447 GSGY 450 G G+ Sbjct: 479 GGGW 482 >gi|332828972|gb|EGK01650.1| hypothetical protein HMPREF9455_02061 [Dysgonomonas gadei ATCC BAA-286] Length = 458 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 123/464 (26%), Positives = 232/464 (50%), Gaps = 36/464 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I + ++LL+ C +G +Y +P M + P F G S + + W ++DT L L+ Sbjct: 7 ILIISVILLSSCKIGQKYEQPEMNM-PKAFDAG-SMATGDASDIGWSTLYSDTVLQGLIT 64 Query: 67 IALQQNLTILQATERIN--AAKENILSVRADLFPS------------SYASISHRFIPNL 112 AL N +L A RI AAK+ I A+LFP +Y + ++ P L Sbjct: 65 KALGHNKDMLVAVARIKEMAAKKRI--SFANLFPEIGGELAGQKEHLNYGGDNSKYTPEL 122 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK----LNVISKLIPSYIDAR 168 + N L+ W++D++G+ R + +AY Q A+ L +++++ SY + + Sbjct: 123 RAN----LNVSWELDVWGKLRWANDAGV---AAYMQTVEAQRALHLTIVAQVAQSYFELK 175 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + I Q L+ ++ + + L++ G TS++ + E+ E+ IP LE ++ Sbjct: 176 ALDRELEIVKQTLEARREGVRFAKLRYEGGLTSEIPYRQSLVELARTETLIPNLENEIKL 235 Query: 229 NVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +++ L+G +P+ ++ P +P+++ P+ L++ RPD+ E+KL + Sbjct: 236 KENDLFVLVGEFPSGSIPRVGGDINHQLIPQ-SLPVDM--PSSLLKRRPDMIQAEQKLIE 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A++GIA ++++PSL+L G + +D ++F T W L PIF+ GK K+ Sbjct: 293 TNARVGIAYTEMFPSLNLTGRLGGENDELSNFLKSPT-WFISGVLTGPIFNMGKNKAAHN 351 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+++ +++ T++++VL A KEV N++ + N+ K++ + K L+ + Y Sbjct: 352 AAKAAYEQEVYTYEKSVLEAFKEVNNSIVTFNKMKEVYRSQEALYNSAKSYHELAKLQYV 411 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S +D+LD +R E+ L+ A S V LY +G G Sbjct: 412 NGVISYIDLLDAQRQFFDAEIALNTAILNELSSMVGLYKVLGGG 455 >gi|187930810|ref|YP_001901297.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12J] gi|309780194|ref|ZP_07674945.1| outer membrane multidrug efflux protein OprB [Ralstonia sp. 5_7_47FAA] gi|187727700|gb|ACD28865.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|308920897|gb|EFP66543.1| outer membrane multidrug efflux protein OprB [Ralstonia sp. 5_7_47FAA] Length = 514 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 121/465 (26%), Positives = 221/465 (47%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ P +++ +N L W E F D L Sbjct: 22 VLSGCSLAPTYERPDAPITGTYPQAPAGYAVPADSAKPGENAPRATELGWREFFPDARLQ 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNST-- 117 KL+ +AL+ N + A + AA+ ADL P AS ++ P++ T Sbjct: 82 KLIGLALENNRDLRVAMLNVEAARAQYRLQIADLLPPVNASATYTRSHTPPSISTTGGDI 141 Query: 118 -------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G S+++++LF S+ A+ + A++++IS++ +Y++ R + Sbjct: 142 HTKQYQLGVGISNYQVNLFSVGDVTSSARASYLATDEGRRAAQISLISQVAKAYLNERAY 201 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ +A Q L + +L+ +F GA+S L L + E ++S+ + L + + Sbjct: 202 AEQLDLAQQTLKGREDYYKLAKQRFDVGASSALDLRQTETLVESVRVSVAQLTRQYAQAT 261 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P L S+ + I G+P++L+ RPDIR E+KL + A Sbjct: 262 NALVLLVGAPLPADLPAPTMVSSE---KIVADIPPGLPSELLEQRPDIRQAEQKLIAANA 318 Query: 291 KIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +PS+ L ++ HD F WSF P L LPIF+ G N+ Sbjct: 319 NIGVARAAFFPSIGLTSNVGTASGALHD-LFKSGTQFWSFVPNLTLPIFNWGTNIFNLDL 377 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + +++T+ A +EV +AL + ++ V + + ++LS YR Sbjct: 378 TKTNQKIAVANYEKTIQTAFREVSDALVARGTLEEQVAAQKRFRDATADRLTLSDQRYRN 437 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 438 GVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 480 >gi|60681955|ref|YP_212099.1| putative outer membrane exported protein [Bacteroides fragilis NCTC 9343] gi|60493389|emb|CAH08175.1| putative outer membrane exported protein [Bacteroides fragilis NCTC 9343] Length = 468 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/422 (23%), Positives = 205/422 (48%), Gaps = 30/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ L+ +A++QN ++L A +RIN AK N+ R + FP+ ++ + Sbjct: 51 QWWKAFQDPVLDSLISVAVKQNYSVLTAIDRINMAKANLRMERGNFFPT--IGLNAGWTR 108 Query: 111 NLKTNST------------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +T L+ W++DLFG R +++ N ++ + +++ Sbjct: 109 QQSSGNTSDLPQSTQHYYDASLNMSWELDLFGSIRNRVKAQKENFAASKEEYTGTMISLC 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +YI+ R ++ +++ + + ++++ +++ G SKL + + ++ S ++ Sbjct: 169 AQVASAYINLRELQQELAVVQKNCASQEAVLKITEVRYNTGLVSKLDVAQAKSVFFSTKA 228 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 IP +E + ++ LLG E + P+ PI +G+PADL+ RPD Sbjct: 229 SIPQIESGINQYITTLAILLGTYPQEVRPALTAPGT--LPDYMEPIGVGLPADLLLRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 IR E+ + A +G +KSD P + L GS+ LTH S + P Sbjct: 287 IRSAERSVNAQAALVGASKSDWLPQVFLKGSVGYAAKDLKDLTHHKSM-----TYEIAPA 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +F ++ + + A++ E + +TVL AI+E +NA+ + K + L+ Sbjct: 342 LSWTLFKGTQLVNATKLAKAQLDEAINQFNQTVLIAIQETDNAMNAYRNSIKQIVALREV 401 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++LS+ Y+QG ++LD +R+ E L A+ + +Y A+G G Sbjct: 402 RNQGQETLTLSLELYKQGLTPFQNVLDAQRSLLSYENQLVQARGYSLLQLIAMYQALGGG 461 Query: 450 YN 451 ++ Sbjct: 462 WS 463 >gi|258543424|ref|YP_003188857.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256634502|dbj|BAI00478.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256637560|dbj|BAI03529.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256640612|dbj|BAI06574.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256643669|dbj|BAI09624.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256646724|dbj|BAI12672.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256649777|dbj|BAI15718.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256652765|dbj|BAI18699.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655821|dbj|BAI21748.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 507 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 119/496 (23%), Positives = 219/496 (44%), Gaps = 62/496 (12%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKL 64 L ++ L+GCTVGP Y KP + P + I T +WW F+D L KL Sbjct: 8 GLSVIALSGCTVGPNYHKPQVKA-PADWRAMQPPAESQITTASTDPQWWTLFHDPVLTKL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------------------- 98 NL + A+ R+ ++ A FP Sbjct: 67 ENEVAASNLDLKAASLRLMQSQAERRIASAAQFPHAEANASYGRERASTNGVLGLLGTME 126 Query: 99 ----SSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANL-D 143 S AS S F P S G +++ W++D +G RR +E++ A + + Sbjct: 127 REQAGSIASGSQGFGPTALPGSVGNPSFNLPQYGMNASWEVDFWGHVRRQVEAATAAMHE 186 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 + + DI ++++++ YID R + +I I + + K +++L+ L+F QGA ++L Sbjct: 187 TEEMRRDIL-VSLMAETAQDYIDLRATQTQIGILQHNIQVAKDSVKLTTLRFEQGAATRL 245 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP- 262 + + ++ + ++ +P L+ ++ +S L+ P IP Sbjct: 246 DVAEATGQLHTFQARLPPLQAQATHMLNALSFLVAREPGAL-------DAELGPPGPIPL 298 Query: 263 ----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDN 315 + IG+P++L RPDIR L + A IG+A +D +P ++L+GS+ AL Sbjct: 299 VPALVPIGLPSELAERRPDIRMAADHLHAATASIGVAIADFFPRVTLSGSLDVQALQFSG 358 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + + FGP LP+F+ G++ + ++ +E +Q TVL A +E+++A+ Sbjct: 359 LGSWASRQYGFGPTATLPLFEGGRLTGQLHLRKAQQKEAATMFQRTVLKAWQEIDDAMAD 418 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + +L AV ++ ++ + Y QG L++L ++ A + L+ A + Sbjct: 419 FTAAQHRRDELAEAVHENEIAVDTAKAQYVQGSSDFLNVLTLQNALLSSQSALADATACV 478 Query: 436 AKSYVDLYIAIGSGYN 451 A + LY A+G G+ Sbjct: 479 AGAVTHLYRAVGGGWE 494 >gi|91777520|ref|YP_552728.1| aromatic acid efflux system NodT family outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91690180|gb|ABE33378.1| aromatic acid efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 510 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 216/458 (47%), Gaps = 29/458 (6%) Query: 17 GC-TVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC VGP Y P L+ P + + N+ + WW+ ++D LN LV A Sbjct: 24 GCMNVGPNYALPQQALVNAPLANTPIEGADAALTTRRNVPPV-WWKLYDDPVLNGLVDEA 82 Query: 69 LQQNLTILQATERINAAKENILSVRA-DLFPSSYASISHRF------------IPNLKTN 115 LQ N + A + ++E + +A F +++ R +P Sbjct: 83 LQSNTDLRVAAANLARSREALGVAQAQGGFSGKTSALIERAQESAEQYLLTEKLPVANEG 142 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G + ++IDLFG+ RR +E++ A+ +S A D+A++ V++ ++ SY++ + + Sbjct: 143 DIG-ISVSYEIDLFGKLRRGVEAAQADSESVQAAADLARITVVADVVRSYVEQCSAADEL 201 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA Q L L K+ +++S G ++ + + + ++ ++ +DIP ++ + ++ Sbjct: 202 RIAQQSLSLQKQRVDVSRRLRDAGRGNQPDVTRGQTQVDTLSADIPRYTARRKIAQYRLA 261 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL ++ + + + P + PI IG A L++ RPD+R E++LA S A+IG+ Sbjct: 262 ALLARAPSDLPPAVL--ACDTLPQIRQPIPIGDGAALLKRRPDVREAERQLAASTARIGV 319 Query: 295 AKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A LYP++S+ S LT ++ W FGP + F + + A++S+Q Sbjct: 320 ATGALYPTVSIGASAGLTGILEDLGTSPTARWGFGPLISW-TFPANGARGRVGEAQASSQ 378 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + VL A++E E +L + D L+ AV+ S + Y GR S + Sbjct: 379 VALAKFDGVVLTALRETETSLATYASDYARADALRAAVKSAAASADETHRLYLAGRESFI 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD R + + A+ Q+A V+L++A+G G+ Sbjct: 439 SDLDATRTLTSTKSQAAAAEGQVAIDQVNLFLALGGGW 476 >gi|330990922|ref|ZP_08314877.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329762068|gb|EGG78557.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 522 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 49/484 (10%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLP------TQFSIGNSKNLINIDTLKWWESF 56 I +++F+ + L C VGP Y P + L+P T FSI +S+N ++ WW+SF Sbjct: 52 IRQSVFAAVMSCLTACAVGPNYRTPQISLIPFHNVSKTAFSISSSENAVS-----WWKSF 106 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYAS 103 +DT L+K+ L QNL + A R+ + S A + P S Sbjct: 107 HDTELDKIESRVLTQNLDLKAAYARVLQGRAIARSAAAQMLPTLDFSPQVSATRLSEEGL 166 Query: 104 ISH--RFIPNLKTN----STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 I H R IP+ + + G + S W++D+ G RR E++ +A A+ D +L++ Sbjct: 167 IGHIVREIPHFNRDYREYNVGGVAS-WELDIAGGLRRAHEAARDEFQAAEAEGDGTRLSL 225 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ R + R+ IA + +K ++L + ++ L +++ Sbjct: 226 AAEAADTYLRIRGDQARLRIARDVFTSNQKMMDLIRQRRSRNVADDRELSSATVVVEAAR 285 Query: 217 SDIPTLEKSFRMNVHNISTLLG-YPAT---EFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ +EK + + L+G P T E Y + P + P P +++ Sbjct: 286 QNMIDIEKDEETQSNRLDVLMGTQPGTYAVELRIYAEL------PAVPAPSANAQPLEVL 339 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFG 327 R RPD+ E++LA S A+IG A ++ YP +SL G++ + + PG+ + Sbjct: 340 RRRPDVIASERRLAASNARIGEALANYYPKISLQGALGFESMSPQQLFTAPGFQP--TAT 397 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L IFD GKI S++ RA S E ++Q T+L A ++VE+A +++ ++ + Sbjct: 398 GALRWRIFDFGKISSDVSRARGSYAEALASYQATMLRAAEDVEDAFFHLSQTRQAIASQM 457 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 H VE + +L+ +Y G +L D L + L+ + + ++ V+ + A+G Sbjct: 458 HNVEALHHAAALTWQSYTAGTLALNDALQANITLLNAQDRLASMRAEEDRAAVECFRALG 517 Query: 448 SGYN 451 G+ Sbjct: 518 GGWQ 521 >gi|119899202|ref|YP_934415.1| outer membrane efflux protein [Azoarcus sp. BH72] gi|119671615|emb|CAL95528.1| probable outer membrane efflux protein [Azoarcus sp. BH72] Length = 469 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 113/462 (24%), Positives = 216/462 (46%), Gaps = 25/462 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKL 64 +F L + +A C++ P Y P +P+ + DT W + F D +L +L Sbjct: 5 VFGLALTGVAACSLAPPYELPALPVESRYPADAPVAPAAQRAADT-SWQDYFADPALRRL 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTN----ST 117 + AL + + A R+ A+ RAD FP+ + + R +L ++ Sbjct: 64 IGQALDNSRDLRAAVLRVEEARAAFGIRRADRFPTVGLGFEGVRGRTPADLSITGEAVTS 123 Query: 118 GQLD-----SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 GQ + W++DL+G+ R +E ++L + A ++V++++ +Y+ R Sbjct: 124 GQYQMGISLASWELDLWGRVRSLEGAALEEFLATEAARRAVTVSVVAQVADAYLTLRELD 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ERI +A + +D +++ + + GATS+L L ++E + ++ LE++ + H Sbjct: 184 ERIVLAQRTIDTRQESFRIFSRRVEVGATSRLDLAQVETLLTQAQALGAQLEQARALQAH 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ L+G P + + +L + ++ G+P++L+ RPDI E +L + A Sbjct: 244 ALAVLVGAPLD-----LPAAATRLDDDLILHELDAGLPSELLTGRPDIVAAEHRLKAAHA 298 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P ++L S D F + W F P + LPIFD G+ ++ + A Sbjct: 299 SIGAARAAFFPRIALTASAGSASAALDGLFEPGSGAWRFAPTISLPIFDAGRNRAGLDLA 358 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E ++++TV A +EV +AL + + + + + A+ + L+ + Y G Sbjct: 359 EVRRDLAVASYEKTVQQAFREVADALAARHWLEAQLGIQRAALATQVERARLAKLRYDNG 418 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R E + +R L S V LY A+G G Sbjct: 419 AARYLEVLDAQRDLLAAEQQVVQTRRALLSSRVALYAALGGG 460 >gi|289625620|ref|ZP_06458574.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869065|gb|EGH03774.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 477 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 125/464 (26%), Positives = 217/464 (46%), Gaps = 30/464 (6%) Query: 11 FIVLLAGC-TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F +L+ C VGP+Y P + P L + + G S N ++ WW + D L++ Sbjct: 12 FTAVLSACQVVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLYQDARLDE 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-------------P 110 LV+ A+ N + A + A+ A ++ A I + + P Sbjct: 71 LVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTDKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A +D A++ V++ + +Y Sbjct: 131 VANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAALDTARITVVADAVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I + Sbjct: 308 AQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|288353357|ref|YP_003422654.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] gi|285026758|gb|ADC33851.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 494 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 129/474 (27%), Positives = 226/474 (47%), Gaps = 47/474 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESFNDTSLNKLVKI 67 ++ L CTVGP+Y PH L+ SI + L ++D WWE F+D L ++ + Sbjct: 30 VLSLEACTVGPDYKAPHSDLVQFHNSISVERRAGEPLPSLD--HWWEEFHDLELVRIEQR 87 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTG- 118 L QNL + A RI A + A + P S+Y + I + N G Sbjct: 88 VLMQNLDLKAAIGRIQQAHGAAEAAAAQMLPTLDFAPQVSAYRLSNEGLIGRMARNFPGY 147 Query: 119 ---------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + W+IDLFG RR E++ ++A AQ +++V +Y R Sbjct: 148 NRDQRAYDVHGAASWEIDLFGGLRRGHEAARDEAEAAIAQSAGVRVSVAGDAADAYFQIR 207 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ R+ +A++ + ++L + +G +S+ + + A ++S IP L + + Sbjct: 208 GYQARLLVANERVATDSHLLDLVQQRRIRGVSSQREVDQAIALLQSARETIPVLRAALEV 267 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIRYQEKKLA 286 ++ + L+G + H + S+ + I +IG PAD++R RPD+ E++LA Sbjct: 268 QLNRLDVLMGVQPGTYAHELALPSS-----VAIIPSIGNVTPADVLRRRPDVIAAERRLA 322 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP---------IFDK 337 S A+IG A +D YP LSL+G++ F + + F P + P IFD Sbjct: 323 ASNARIGAALADYYPKLSLSGALG------FQSLSVNKMFTPAGFQPASSGILRWRIFDF 376 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 GKI + + +A+ + EQ ++ TVL+A ++VENA S+ + +K L+ V ++ Sbjct: 377 GKIDAEVHQAKGAYAEQLAQYRSTVLHAAEDVENAFMSLAQSEKRAEDLRTEVASLAEAR 436 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS +Y+ G SL D+L +R + + + + + A++ V + AIG G+ Sbjct: 437 DLSSQSYKAGIISLTDVLAADRQLLEAKDRQAENQSETARAAVRSFRAIGGGWE 490 >gi|221067758|ref|ZP_03543863.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220712781|gb|EED68149.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 468 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 111/462 (24%), Positives = 212/462 (45%), Gaps = 23/462 (4%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ +L V+LAGC+ P Y +P P+ P +S ++ +++ +L W + D L + Sbjct: 10 AVLTLIAVVLAGCSFAPTYDRPAAPI-PGSWSAASAATPVSVQSLHWKDFVIDERLRSRI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDS 122 + AL N + Q + A+ RAD P A S R +L ++ S Sbjct: 69 ETALANNRDLRQTLLNVQTARAAYRVQRADQLPGLEAQASGNRQRLPADLSGTGAARVQS 128 Query: 123 DWK---------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +++ +DLFG+ R + E++L + ++++++++I + + ++ Sbjct: 129 NYQAGVGLMAFELDLFGRMRSLSEAALMEYLATEETARSVQISLVAEVIQASLAHDSARQ 188 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R +A + L K +L + G +L + + +++ +++ L + R + Sbjct: 189 RQVLALRTLQARDKEWQLMSERRKTGTAGRLDEQEAQGQLELARAEVERLSRELRQAANA 248 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G + +Q ++ L I G+P+DL+ RPDIR E +L A I Sbjct: 249 LDWLVGDGS------VQAAADLSAAPLVQEIGAGLPSDLLELRPDIRAAEYQLRSRNASI 302 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL GS + F G WSF P+L LPIFD G+ ++N+ A+ Sbjct: 303 GAARAAFFPRISLTGSYGSASAELSDLFAGGQRSWSFMPQLSLPIFDGGRNRANLEIAQL 362 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++ ++ A +EV +AL S+ ++ Q V+ ++ L+ + YR G Sbjct: 363 RKDMAIASYERSIQTAFREVSDALASVETLRREELARQRLVQTSANTLKLAELRYRAGLD 422 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R ++ L Q + L+ A+G G+ Sbjct: 423 SHLRYLDAQRTDFAQQMALIEVSTQRQMALATLFKALGGGWG 464 >gi|254240956|ref|ZP_04934278.1| hypothetical protein PA2G_01636 [Pseudomonas aeruginosa 2192] gi|126194334|gb|EAZ58397.1| hypothetical protein PA2G_01636 [Pseudomonas aeruginosa 2192] Length = 499 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 117/475 (24%), Positives = 228/475 (48%), Gaps = 53/475 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 GC +GP+Y +P + +P +F + D + WWE + D +LN L + Sbjct: 17 GGCAIGPDYQRPDL-AVPAEFKEAEGWRRAEPRDVFQRGAWWELYGDQTLNDLQMHLERS 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS--------- 122 N T+ Q+ + A+ + RA FPS ++ +ST +L Sbjct: 76 NQTLAQSVAQFRQAEALVRGARAAFFPSITGNVGKTRSGQGGGDSTVRLPDGSTVSSGGG 135 Query: 123 --------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 W++DL+G+ RR +E++ A+L ++ A + +L+ S+L +Y+ Sbjct: 136 SGAISNSYSTSLGVSWEVDLWGKLRRQLEANQASLHASAADLAAVRLSQQSQLAQNYLQL 195 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+I + + + Y+++++++ K+ G ++ + + ++KS ++ L+ Sbjct: 196 RVMDEQIRLLNDTVTAYERSLKVAENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRA 255 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 H I+ L+G P +F N P +P + +P+ L+ RPDI E+ Sbjct: 256 QLEHAIAVLVGLPPAQF---------NLPPVASVPKLPDLPAVVPSQLLERRPDIASAER 306 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 K+ + A+IG+AK+ +P L+L+ S +L++ S P N WS GP+ + +FD G Sbjct: 307 KVISANAQIGVAKAAYFPDLTLSAAGGYRSGSLSNWISTP--NRFWSIGPQFAMTLFDGG 364 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 I S + +AE++ + T+++TVL+ +EVE+ L ++ + + A+E ++++ Sbjct: 365 LIGSQVDQAEATYDQTVATYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREALR 424 Query: 399 LSMINYRQGRYSLLDILDIERATA--KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G D++ +ATA L++ +L S V L A+G G++ Sbjct: 425 LAENQYKAGTVDYTDVV-TNQATALSNERTVLTLLGSRLTAS-VQLIAAMGGGWD 477 >gi|253999657|ref|YP_003051720.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253986336|gb|ACT51193.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 482 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 119/450 (26%), Positives = 214/450 (47%), Gaps = 22/450 (4%) Query: 17 GCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y KP + P + + + T WW FND L +++ A + + Sbjct: 20 GCQGWPMVGPDYQKPKT-VTPDTWQVQTP--VPAAQTADWWRQFNDDVLLEIITAAERNS 76 Query: 73 LTILQATERINAAKENILSVRADLFP--SSYASISHRFI-----PNLKTNSTGQLDSDWK 125 ++ A + I +A+ N+++ RA F S+ SIS + P L T D+ W+ Sbjct: 77 ASVADAYKNIASARANLVAARAMGFDGLSATPSISRKAFSFGGDPTLLTQQQISFDTSWE 136 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 IDLFG RR ESSLA+ D+ + A+L+V ++ +Y D R ++++ + + L+ Sbjct: 137 IDLFGGLRRERESSLADYDAKRNLLQDARLSVAAESAKAYNDYRFCQQKVRLYERYLESK 196 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ EL+ G S +A SD+ + + + + L G + Sbjct: 197 TRSAELTASATAHGFKSDSDNALAQATQAQAASDLNDQQMQCELQIKAMVALTGMAEPQL 256 Query: 245 LHYMQKQS-NNFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + + QP + +P +PA L+ RPD+ E+ LA + A++G+ ++D YP Sbjct: 257 RERLAPRDFTVLQPGTFDVP---SVPAVLLEQRPDLLAAERDLAAASAQVGVKEADRYPK 313 Query: 303 LSLNGSIA-LTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++L+G+I + + NS N WSFGP + +P+FD G+ K+N+ A S + ++ Sbjct: 314 ITLSGNITPVRYLNSGVTNNALTWSFGPTIDIPLFDMGQRKANVSAAWESLRAADSNYRS 373 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 AIKEVE L ++ LQ A + + +++ Y G + +D+ R Sbjct: 374 KARTAIKEVEQKLLTLQSYNARQPSLQQAADNYAQALQAISQRYEAGFDNAIDLETTRRN 433 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L+ + + ++LYIA+G G+ Sbjct: 434 ALEADYALTQLNQNRITTLIELYIAVGGGW 463 >gi|302038779|ref|YP_003799101.1| RND efflux system, outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] gi|300606843|emb|CBK43176.1| RND efflux system, outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] Length = 481 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 108/455 (23%), Positives = 218/455 (47%), Gaps = 20/455 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIALQQ 71 VLL C +GP+Y++P + + P +F + ++ + L WW+ D L +L+++AL + Sbjct: 11 VLLGACAIGPDYSRPDLAV-PDRFRMAATQQETESFANLPWWDLLQDEQLRRLIRVALAE 69 Query: 72 NLTILQATERINAAKENILSVRADLFPSS--------YASISHRFIPNLKT--NSTGQLD 121 N + +A + + +L + D P + + ++ P N Q + Sbjct: 70 NKDLKRAVASVEDFQARMLIAKMDFAPKADLTSNAPLFGRKANFLFPGFPNPFNYYLQGN 129 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W+ID++G+ RR E++ +L S L ++S + +Y D F ++++A + Sbjct: 130 LSWEIDIWGRIRRSNEAARGDLLSREEARRAVVLQLVSGVAEAYFDMLQFDMQLAVAQRT 189 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + +++ ++ + +G SK+ + AE + + L + + +S LLG Sbjct: 190 LKSWDESVRIAEARLREGMISKIDADQFAAERANAAARAAELSRQMVQKENQLSVLLGRV 249 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + P + G+P++L++ RPD+ E++LA + A+IG+AK+D + Sbjct: 250 PGQIPRGRSLTDQVMPPE----VPAGLPSELLQRRPDLVQAEQELAAATARIGVAKADRF 305 Query: 301 PSLSLNG--SIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P LS+ G +A + T + GP L P+ + + AE+ ++E Sbjct: 306 PKLSITGILGVASPQLSRLVANETAFGVAGPGLTGPLLNAQILGFQQDAAEAQSREALAR 365 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++++L A +EVE+AL ++ ++ T V+ + ++ L+ + Y+ G + LD+L Sbjct: 366 YEQSLLVAFREVEDALVAVRTVREQRTAQVEQVDALRSALRLANLRYKGGLANYLDVLVA 425 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +R E+ L+ R S V LY A+G G++P Sbjct: 426 QRNLFDAELALTSTHRLQLVSVVQLYKALGGGWSP 460 >gi|307292613|ref|ZP_07572459.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306880679|gb|EFN11895.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 468 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 125/450 (27%), Positives = 221/450 (49%), Gaps = 19/450 (4%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTI 75 C GP++ P P IG+ + WW +ND L+ LV+ AL+ N I Sbjct: 18 CAAGPDFKAPVAPAAAGGAFIGSVGPAVVAAQADDHWWRLYNDPVLDGLVQDALKANTDI 77 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRF--------IPNL-KTNST--GQLDSDW 124 A R+ A+ + R+D P + S S + +P + + N T L+ + Sbjct: 78 RVAVARLEKARAGLRGARSDKLPQTTLSGSPSYGRTSAAQSLPGVDRENWTVDAGLNVAY 137 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ +R IE++ ++ +A D ++ V++ + +Y+DA ERI++A Q + L Sbjct: 138 EVDLFGRVKRSIEAAKGDVGAAAGDADAVRVAVVADTVRAYVDATSSAERIAVARQTVAL 197 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 K+I +++ +F G + +L ++++ A + IP+L + ++TL G + Sbjct: 198 LDKSIRITNARFEVGRSDRLDVIRVTALRDQQAAVIPSLIADRDGALFRLATLTGRVPQD 257 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 +++Q P L PI +G L+ RPD+R E++LA A+IG+A +DLYP + Sbjct: 258 LPGAVREQ--RVTPGLSQPIPVGDGRALLARRPDVRAAEQRLAADTARIGVATADLYPRI 315 Query: 304 SLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L GSI T + W GP + + ++ I A++ A + Sbjct: 316 TLGGSIGTTAVGGGDIFGGGPFRWLLGPLINWAFPNSQANQARIAAAKADADGSLAAFDG 375 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVL A++E E AL+ + L+ A E +++ +S+ R+G+ L +LD +R Sbjct: 376 TVLRALEETETALSVYAHALERRDTLKAAREAAERAARISLARQREGQIDFLTVLDAQRT 435 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 A E DL+ A R +A + VDL+ A+G G+ Sbjct: 436 LAAAESDLASANRAVAFAQVDLFRALGGGW 465 >gi|160889590|ref|ZP_02070593.1| hypothetical protein BACUNI_02016 [Bacteroides uniformis ATCC 8492] gi|317480080|ref|ZP_07939191.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] gi|156861107|gb|EDO54538.1| hypothetical protein BACUNI_02016 [Bacteroides uniformis ATCC 8492] gi|316903757|gb|EFV25600.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] Length = 477 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 106/420 (25%), Positives = 203/420 (48%), Gaps = 28/420 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 KWW++F+D L+ L+ +A QN ++L A R++ AK N+ R FPS Sbjct: 61 KWWKAFDDPMLDSLITVASTQNYSVLSAMARMDMAKSNLRIERGSFFPSISLDGGWARQQ 120 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +S + +P T + + L++ W++D+FG R+ +++ ++ + +++ ++ Sbjct: 121 SSGNVNALPQSITGAYSASLNASWELDVFGSIRQRVKAQRETFMASKEEYTSVMVSLCAQ 180 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI R ++ +S+ + ++ +++ G SKL + + ++ S ++ I Sbjct: 181 IASAYIGLRELQQELSVVTHNCHTQAAVLNITEVRYKTGLVSKLDVSQAKSVYYSTKASI 240 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P LE + ++ LLG YP + + + ++ P+ PI IG+PADL+ RPDI Sbjct: 241 PQLEAGINQYITTLAILLGTYP--QHIRPILEKPGKL-PDYMEPIGIGVPADLLLRRPDI 297 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKL 330 R E+++ A +G ++SD P + L GSI LT NS + P + Sbjct: 298 RQAERQVNAQAATLGASQSDWLPQVFLKGSIGYSSHDLKDLTKRNSMT-----FEIAPNI 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +F K+ + R A + E + +TVL A++E +NA+ S + + ++ Sbjct: 353 SWTLFSGTKLVNATRLARAQLDESIHQFNQTVLTAVQETDNAMNSYRNSIQQIVAMREVC 412 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++++ LS+ Y+QG ++LD R+ E L A+ + LY A+G GY Sbjct: 413 NQGEETLKLSLDLYKQGLTPFQNVLDALRSLLTYENQLVQAQGSSLLHLIALYQALGGGY 472 >gi|224538024|ref|ZP_03678563.1| hypothetical protein BACCELL_02913 [Bacteroides cellulosilyticus DSM 14838] gi|224520371|gb|EEF89476.1| hypothetical protein BACCELL_02913 [Bacteroides cellulosilyticus DSM 14838] Length = 457 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 117/460 (25%), Positives = 228/460 (49%), Gaps = 34/460 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++L + C +G Y +P + L P Q ++ +++ +WWE + DT+L L++ L+ Sbjct: 13 LVLLFSSCQLGKHYVRPELNL-PQQLD-STEQDTLSLADRQWWELYTDTTLQALIERTLE 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG--QLDSD----- 123 N + A R+ KE R D F + + +S + + + + G DSD Sbjct: 71 YNKDMKIAAARV---KELAAMKRID-FANLFPQVSGKLYADKEAENYGGDNYDSDRSYEA 126 Query: 124 -----WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W++DL+G R + S+A+ L S AQ + K+++++++ +Y + ++I Sbjct: 127 KAIVSWEVDLWGNLRWAKDKSMADFLGSIEAQRAL-KMSLVAEVAQAYFELVALDNELAI 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L+ K+ + L+ L+F G TS+ S + + E + +P LE+ + ++I+ L Sbjct: 186 VRQTLNARKEGVRLAKLRFEGGLTSETSYQQAQVEFARTATLVPDLERKISIKENDIAFL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPN-LYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G Y +K + P + +P N +G+P+ L+ RPD+R E+KL + A +G Sbjct: 246 AG-------EYPRKIERSVLPEEVKLPENLPVGLPSTLLERRPDVRQAEQKLIAANATVG 298 Query: 294 IAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +A ++++P L+L L + F H+ G L P+F GK ++ ++ +++ Sbjct: 299 LAYTNMFPRLALTAHYGLESAEFSDFLKSPYHFLSGS-LLTPLFAMGKNRAMLKAKKAAY 357 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ +++++VL A K+ NA+ N+ K I + + ++ L+ + Y G Sbjct: 358 EQEVYSYEKSVLTAFKDARNAIVDFNKIKDIYESRLQLEQAAQTNVELAQLQYINGVIGY 417 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD +R ++ LS A R + V LY A+G G+ Sbjct: 418 LDVLDAQRGYFDAQIGLSNAIRDKQITLVRLYKALGGGWQ 457 >gi|91775098|ref|YP_544854.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91709085|gb|ABE49013.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 477 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 115/463 (24%), Positives = 223/463 (48%), Gaps = 31/463 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLKWWESFNDTSLNKLVKIA 68 +LL C VGP+Y +P + P F ++ +I +WW+ + D LN+LV Sbjct: 15 LLLPACMVGPDYRRPQT-VAPAAFKHQEGWSIAAPADDIPKGEWWKRYGDAELNQLVARL 73 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF---------------IPNLK 113 NLT+ Q + A S R L+P A++ + ++ Sbjct: 74 NNSNLTLAQYEAQYRQAFALAQSARGALWPQLNATLGKTRAGQGAGSSTSSQAVQVSGIR 133 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T L++ W+ID++G+ RR +E++ A+ +++ A + +L++ S+L+ +Y+ R + Sbjct: 134 TTYNAALNASWEIDIWGRLRRTLEANRASAEASLATLAAMRLSMQSELVQNYLQLRVMDQ 193 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + D Y++ ++L+ ++ +G + + ++K+ E+++ L R + N Sbjct: 194 QKRLLTETADTYRRVVQLTESQYKRGVVASADVAAATTQLKNTEAELVDLVWQ-RAQLEN 252 Query: 233 -ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L+G F + P L + +P+ L+ RPD+ E+ + + A Sbjct: 253 AIAVLIGEAPANF----SLAEADTMPQL-PAVPAAVPSQLLERRPDVAAAERSVMAANAN 307 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AKS YPSL+L+ G + T D+ N +WS GP+L + +F+ + K N+ +AE Sbjct: 308 IGVAKSAYYPSLTLSATGGYRSRTFDDWMTMPNRYWSVGPQLAMTLFNGLQNKYNVVQAE 367 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +S +++TVL A +EVE+ L +++ + T + +V +K++ YR G Sbjct: 368 ASYDAAVAGYRQTVLTAFQEVEDYLVALHTLGEEATLREESVAAARKALRQYTNQYRVGL 427 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD++ + E L ++ S V L A+G G++ Sbjct: 428 IGFLDVVTAQTTALNSERTLLTLQQSRLISSVQLIAALGGGWD 470 >gi|302038761|ref|YP_003799083.1| RND efflux system, outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] gi|300606825|emb|CBK43158.1| RND efflux system, outer membrane factor lipoprotein [Candidatus Nitrospira defluvii] Length = 477 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 119/459 (25%), Positives = 219/459 (47%), Gaps = 28/459 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIALQQ 71 LL C VGP++TKP P F + + N +I WWE D L KL++ AL++ Sbjct: 11 TLLTACAVGPDFTKPDA-TTPEAFRMAEAGGNTASIANTPWWELLKDQELQKLIRTALEE 69 Query: 72 NLTILQATERINAAKENILSVRADLFPSS--------YASISHRFIPNLKT--NSTGQLD 121 N + +A + + + + D P + ++ P N Q + Sbjct: 70 NKDLQRAAAAVEEFQARLFIAKTDFAPQMNVTTNAPLFGRKTNFLFPGFPNPFNYYLQGN 129 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W+ID++G+ RR E++ +L S L ++S + +Y + F ++ IA + Sbjct: 130 LSWEIDIWGRIRRSNEAARGDLLSREENRRAIVLQLVSGVAEAYFELLQFDMQLDIARRT 189 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L +++++ ++ + QG SKL + EAE + + E+ + +S LLG Sbjct: 190 LKSWEESVRIAQARLRQGMISKLDADQFEAERANAAAKAAEFERQKVQKENQLSVLLGRN 249 Query: 241 ATEFL--HYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 H + +Q +P ++ G+P++L++ RPDI E+ LA + A+IG+AK Sbjct: 250 PGRIARGHSLTEQ--------VMPPDVPPGLPSELLQRRPDILQAEQDLAAATARIGMAK 301 Query: 297 SDLYPSLSLNG--SIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D +P LS+ G +A H + T + GP P+ + + + AE+ A++ Sbjct: 302 ADRFPKLSITGILGVASPHLSRLVANETAFGVAGPGFAGPLLNAQILGFQQKAAEAQARQ 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++++VL A KEVE++L +++ ++ T V+ + ++SL+ + Y+ G + LD Sbjct: 362 AVAQYEQSVLVAFKEVEDSLVAVSTVREQRTAQLQQVDALRSALSLANLRYKGGLANYLD 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +L +R + E+ L R S V LY A+G G+ P Sbjct: 422 VLIAQRNLFEAELALMGTHRLHLVSIVQLYKALGGGWTP 460 >gi|298384617|ref|ZP_06994177.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. 1_1_14] gi|298262896|gb|EFI05760.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. 1_1_14] Length = 457 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 230/465 (49%), Gaps = 27/465 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +N L LF +L C VG Y +P + L P S+ ++ ++ W E + D++ Sbjct: 3 LNKLYIAILLFAGILTSCKVGKSYVRPELHL-PD--SLAQHQDTVSFGDQDWEEIYTDST 59 Query: 61 LNKLVKIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNST 117 L L+ AL+ N +L A RI AA++ I + A L P ++ R + N ++ Sbjct: 60 LRNLIDRALEHNKDMLIAAARIKEMAAQKRIST--AALLPDIKGEVTVERELENHGGDAF 117 Query: 118 GQLDS-------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDAR 168 + D+ W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 118 RKSDTFEAQFLVSWELDLWGNLRWARSASIAEYLQSIEAQRAL-RMTIVAEVAQAYYELV 176 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + Sbjct: 177 ALDTELNIVKQTLKAREEGVRLARIRFEGGLTSETSYRQAQVELARTATLVPDLERKISL 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++I+ L G Q NF L +G+P+ L+ RPDIR E+KL + Sbjct: 237 KENDIAFLAGEYPNRIARSRLLQEFNFPETL----PVGMPSTLLERRPDIRQAEQKLIAA 292 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRR 346 AK+G+A ++++P L+L G + S + + L PIF GK ++ ++ Sbjct: 293 NAKVGVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKG 351 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYR 405 +++ + + ++++TVL A KE NA+ + N+ K++ L+ +E KS M L+ + Y Sbjct: 352 KKAAYEAEIHSYEKTVLTAFKETRNAIVNFNKIKEVYA-LRANLERSAKSYMDLAQLQYI 410 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + LD+LD +R ++ LS A R + V LY A+G G+ Sbjct: 411 NGVINYLDVLDAQRGYFDAQIGLSNAIRDELITVVQLYKALGGGW 455 >gi|225025202|ref|ZP_03714394.1| hypothetical protein EIKCOROL_02099 [Eikenella corrodens ATCC 23834] gi|224941960|gb|EEG23169.1| hypothetical protein EIKCOROL_02099 [Eikenella corrodens ATCC 23834] Length = 498 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 47/469 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F +LL+ CT+ P Y +P + + P F + G S + W + F D L L+ Sbjct: 15 FSLLLSACTLAPRYQQPEVNV-PASFRYDTAAGQSSRAADTG---WEDYFADPRLKSLIT 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTN-------- 115 +ALQ N + A A + RA P AS + R +L Sbjct: 71 LALQNNPDLRMAALNAEAVRAQYAITRAASLPGINASGTGQRARVAQDLSATGRSYIAES 130 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S G + +++DLFG+ R + +++L S+ A D A L ++S + +Y + R+ +E Sbjct: 131 YSVGLGIASYELDLFGKARSNNQAALQGYFSSTAARDSAHLALVSAVAKAYFNERYAEES 190 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN- 232 + +A ++L ++ L+ ++ G S ++L ++EA I+S ++D ++ R HN Sbjct: 191 MKLAQRVLQTREQTYRLNQIQHNAGVISAVNLREMEALIESAKADYAAALRA-REQAHNA 249 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN---------IGIPADLIRNRPDIRYQEK 283 ++ L+ P NN L P+N G+ +DL++NRPDIR E Sbjct: 250 LAVLINQPVP----------NNLPAGL--PLNKQFRITQLPAGLSSDLLQNRPDIRAAEH 297 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNS-FPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +PS+S+ SI T N F G N W F P + +PIF+ G + Sbjct: 298 NLRQANANIGAARAAFFPSISITSSIGTGSTEMNRLFDGINRTWVFSPTIKVPIFNWGSL 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++++ A+ Q +++ V +A ++V NAL + ++ + + + L Sbjct: 358 RASLDVAKLRQQSAVAAYEKAVQSAFQDVSNALVARETLQQQYNARVQTQKAYNDRLRLI 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + YR G S L++LD ER++ + + + + ++ DLY A+G G Sbjct: 418 NLRYRHGVSSSLEVLDAERSSYSADAAVLATQLSMLENLADLYKALGGG 466 >gi|229587717|ref|YP_002869836.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229359583|emb|CAY46425.1| putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 480 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 128/475 (26%), Positives = 227/475 (47%), Gaps = 33/475 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDT-LKWWE 54 M L A +L ++L A VGP+YT P L Q + G N+++ WW+ Sbjct: 1 MKQLLATAALGVLLSACQVVGPDYTLPEKSAINRGDLQGQLA-GEGHNVVSAPVPADWWK 59 Query: 55 SFNDTSLNKLVKIALQQNLTILQA----------TERINAAKENILSVRAD---LFPSSY 101 + D L++LV+ A+ N + A T++ +A + +A+ L S Sbjct: 60 LYKDPRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSVGAKAEAQRLQESGE 119 Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 A + +P S G + + ++ DLFG +R IES+ A+ D+A A DIA++ +++ + Sbjct: 120 AFLLSEKVPVGNIGSVG-ITTSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADV 178 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + SY E ++IA++ LDL ++ +L+ G + + + + + KS+ +D+P Sbjct: 179 VRSYTQVCAANEELAIANESLDLQAQSTKLTQRLRDAGRGDETQVTRSQTQYKSLRADMP 238 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDI 278 + + + +S LL P L + + P++ + +G A L++ RPD+ Sbjct: 239 RYQALRQAGLFRLSMLLAKP----LDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDV 294 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E++LA + A+IG+A LYP +S+ G++ L + P N W FGP + + Sbjct: 295 RQAERQLAAATARIGVATGALYPDISIGATVGTVGLLDNLGTPATN-RWGFGPMISWTVP 353 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G ++ I AE++ Q + VLNAI+E + L + L A E K+ Sbjct: 354 TNGA-RARIHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAKE 412 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ GR S L L R V L+ A Q+A S +DL++A+G G+ Sbjct: 413 AAGQTHRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGW 467 >gi|289662044|ref|ZP_06483625.1| outer membrane efflux protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 482 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 219/465 (47%), Gaps = 39/465 (8%) Query: 16 AGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKWWESFNDTSLNKLVKIA 68 A TVGP Y P P F GN + +WW + D L+ L++ A Sbjct: 20 ACSTVGPNYAVPAESAYQRPAANAAFLDTGNDQVQPGAALPARWWALYQDPMLDGLIEQA 79 Query: 69 LQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASISHRFIP--N 111 L+ N+ + A R A E + RA + S+ A + +P N Sbjct: 80 LRDNVELKVAGANLRRAAAVYEQAMDAGGFDYEVEAGVSRAQV--SAEAFLQEEKLPVFN 137 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L + G+ ++ DLFG+ +R E++ A+ A A +D+A+++V +++ SY++ + Sbjct: 138 L---ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARVSVAAQVAGSYVEICNA 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +A L L + + E++ G + L + A++ +E+ +P L + Sbjct: 195 NHELQVAEHSLQLQQHSREITQRLIAAGRGTPPDLARATAQVAMLEASLPPLRARRQAAG 254 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LLG E + ++ P + PI IG L+ RPD+R E++LA + A Sbjct: 255 YQLAALLGKTPGEVPTGVDNCAHA--PAVQQPIPIGDGRALLARRPDVRQAERRLAAATA 312 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A ++LYP + L GSI T D P TH WSFGP + + G + +R Sbjct: 313 RIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSFGPLISWTLPSSGA-HARVRA 369 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ A + TVL A++EV+ L+ +D + L+ A + + + S + Y+ Sbjct: 370 TEAGADAALAQFDNTVLQALREVQTTLSRYAQDMDRLHLLEQAQQQAELASSQNRRLYQG 429 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 GR L LD ER A ++ L+ A+ Q+++ + L++A+G G+ Sbjct: 430 GRTPYLSSLDAERTLATADMTLANAQAQVSQDQIQLFLALGGGWE 474 >gi|29345716|ref|NP_809219.1| outer membrane protein oprM [Bacteroides thetaiotaomicron VPI-5482] gi|253567704|ref|ZP_04845115.1| outer membrane protein oprM [Bacteroides sp. 1_1_6] gi|29337609|gb|AAO75413.1| outer membrane protein oprM precursor [Bacteroides thetaiotaomicron VPI-5482] gi|251841777|gb|EES69857.1| outer membrane protein oprM [Bacteroides sp. 1_1_6] Length = 457 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 126/466 (27%), Positives = 228/466 (48%), Gaps = 29/466 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +N L LF +L C VG Y +P H+P S+ ++ ++ W E + D Sbjct: 3 LNKLYIAILLFAGILTSCKVGKSYVRPDLHLP-----DSLAQHQDTVSFGDQDWEEIYTD 57 Query: 59 TSLNKLVKIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTN 115 ++L L+ AL N +L A RI AA++ I + A L P ++ R + N + Sbjct: 58 STLRSLIDRALDHNKDMLIAAARIKEMAAQKRIST--AALLPDIKGKVTAERELENHGGD 115 Query: 116 STGQLDS-------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYID 166 + + D+ W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 116 AFKKSDTFEAQFLVSWELDLWGNLRWARSASIAEYLQSVEAQRAL-QMTIVAEVAQAYYE 174 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ Sbjct: 175 LVALDTELDIVKQTLKAREEGVRLARIRFEGGLTSETSYRQAQVELARTATLVPDLERKI 234 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++I+ L G Q NF L IG+P+ L+ RPDIR E+KL Sbjct: 235 SLKENDIAFLAGEYPNRIARSRLLQEFNFPETL----PIGMPSTLLERRPDIRQAEQKLI 290 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIR 345 + AK+G+A ++++P L+L G + + ++ L PIF GK ++ ++ Sbjct: 291 AANAKVGVAYTNMFPRLALTGGFGSESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALK 350 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINY 404 +++ + + ++++TVL A KE NA+ + N+ K++ L+ +E KS M L+ + Y Sbjct: 351 GKKAAYEAEIHSYEKTVLTAFKETRNAIVNFNKIKEVYA-LRANLERSAKSYMDLAQLQY 409 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + LD+LD +R ++ LS A R + V LY A+G G+ Sbjct: 410 INGVINYLDVLDAQRGYFDAQIGLSNAIRDELITVVQLYKALGGGW 455 >gi|237799351|ref|ZP_04587812.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806265|ref|ZP_04592969.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022207|gb|EGI02264.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027379|gb|EGI07434.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 477 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 125/464 (26%), Positives = 219/464 (47%), Gaps = 30/464 (6%) Query: 11 FIVLLAGCT-VGPEYTKPH-----MPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 F LL+ C VGP+Y P P L + + G S N ++ WW + D L++ Sbjct: 12 FGTLLSACQMVGPDYQVPQDGAINRPDLQGELA-GRSVNAVSAPVPAHWWRLYQDPRLDQ 70 Query: 64 LVKIALQQNLTILQATERINAAK-ENILSVRADLFPSSYASISHRF------------IP 110 LV+ A+ N + A + ++ +N + A F S + R +P Sbjct: 71 LVRQAMASNTDLRVAAANLQRSRYQNAEAEAAGGFTSGAKIGAQRVQESGEAYLLTDKVP 130 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y Sbjct: 131 VSNVGDVG-LTTAYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICA 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 190 ANEELDIARESLDLQQQSLTLNRRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAA 249 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LL P + + + N P++ + +G A L++ RPD+R E+ LA S Sbjct: 250 MFRLSMLLAKPVDQLPTGV--STCNALPHIAQVMPVGDGAALLKRRPDVRQAERHLAMST 307 Query: 290 AKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +LYP +S+ SI T + P N W FGP L + G ++ I + Sbjct: 308 AEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTVPSNGS-RARIHQ 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+SAQ + VLNAI+E + L L+ A + K++ + Y+ Sbjct: 366 AEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFYQA 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR S L L R V ++ A ++A ++L++A+G G+ Sbjct: 426 GRASFLADLQATRTYTDVRAQMAEANTEVAMGQINLFLALGGGW 469 >gi|298369531|ref|ZP_06980848.1| outer membrane multidrug efflux protein OprB [Neisseria sp. oral taxon 014 str. F0314] gi|298282088|gb|EFI23576.1| outer membrane multidrug efflux protein OprB [Neisseria sp. oral taxon 014 str. F0314] Length = 479 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 217/451 (48%), Gaps = 25/451 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 CT+ P+Y +P + + P F I +L W + F D L +L+ IAL++N + Sbjct: 22 CTMIPKYEQPAVNV-PETFKYDTQAGTGIQAASLGWQDYFADPRLYRLIDIALERNTDLR 80 Query: 77 QATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLDS---------DW 124 A ++ + RADL P A+ S R +L + + S + Sbjct: 81 TAALNAEGLRKQYMISRADLLPGINATGSGSRGRTAKDLSSTGNSYVSSAYNVGLGVTSY 140 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ R + +++L S+ A D A L++I+ + +Y + + ++ + +A +L Sbjct: 141 ELDLFGKVRSNTQAALQTYFSSLAARDSAHLSLIASVAKAYFNELYAQDSMKLAQNVLKS 200 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ +L+ LK G S + L + +A I+S ++D K+ + ++ L+ P E Sbjct: 201 RERTFKLTQLKHKAGVISAVDLSQQQALIESAKADYENAVKNREQARNALAVLINGPIPE 260 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L F+ + G+ ++++ NRPDIR E L + A IG A++ +PS+ Sbjct: 261 DLPAPLPLDKQFK---ITKLPAGLSSEVLLNRPDIRAAEFDLKKANANIGAARAAFFPSI 317 Query: 304 SLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL +I F G N W+F P + LPIF+ G K+N+ A+ Q Q + ++ Sbjct: 318 SLTSTIGTGSTELSGLFKGGNRTWAFAPTINLPIFNWGSNKANLDYAKIQQQVQIVNYEA 377 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A ++V +AL + + K + + + ++ L + Y+ G S LD+LD ER+ Sbjct: 378 AVQSAFRDVSDALVAREQLDKTYAANRRQSKAYADALRLVRLRYKHGVSSALDLLDAERS 437 Query: 421 TAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 + D ++ QL + + DLY A+G G Sbjct: 438 S--YGADTALLSNQLTRLENLADLYKALGGG 466 >gi|329960884|ref|ZP_08299163.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|328532170|gb|EGF58974.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 459 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 119/461 (25%), Positives = 235/461 (50%), Gaps = 37/461 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L I + C VG Y +P MPL P S+ + ++ ++I +W + D++L L+ AL Sbjct: 12 LSIFMFTSCKVGKNYVRPEMPL-PD--SLVHRQDSVSIADQQWQAVYTDSTLRNLIDRAL 68 Query: 70 QQNLTILQATERI-NAAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDSD---- 123 + N +L A R+ A + +SV A+L P +S +R + N +S D D Sbjct: 69 EYNKDMLIAAARVKEMAAQKRISV-ANLLPQLNGKVSANREMENYGGHSR---DVDNTYE 124 Query: 124 ------WKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G R + + L S AQ + ++ +++++ +Y + + Sbjct: 125 AKALLSWELDLWGNLRWKQVAAVADYLQSVEAQRAL-RMTIVAEVAQAYYELVALDTELE 183 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I Q ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ Sbjct: 184 IVRQTQKAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERRISLKENDIAF 243 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G EF ++++ + F L +P + +G+P+DL+ RPDIR E++L A++ Sbjct: 244 LAG----EFPTHIER--SRFLQELDVPQSLPVGLPSDLLERRPDIRAAEQQLKAEHARVK 297 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +A ++++P L+L G L D + +S + P+F GK ++ ++ ++S + Sbjct: 298 VAYTNMFPRLALTGQFGLESDVLSNFLQSPYSLLNGAVLTPLFGWGKNRAALKAQKASYE 357 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS---MSLSMINYRQGRY 409 + ++++TVLNA KE +NA+ N+ K++ Q V+L + + + L+ + Y G Sbjct: 358 AEIHSYEKTVLNAFKEAKNAIVDFNKIKEV---YQLRVKLERSARNYVDLAQLQYINGVI 414 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +D+LD +R ++ +S A R + V++Y A+G G+ Sbjct: 415 NYMDVLDAQRGYFDAQIGVSNAIRDELIAVVNVYKALGGGW 455 >gi|121592755|ref|YP_984651.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120604835|gb|ABM40575.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 480 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/450 (24%), Positives = 213/450 (47%), Gaps = 11/450 (2%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 VLLAGC+ P Y +P P+ PT + ++ + ++ W + F D L +L+ IAL Sbjct: 22 VLLAGCSFIPHYERPAAPVPPTYPLASASAAAPQSAASIDWKDYFTDPRLQRLIGIALDN 81 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWK 125 N + A + A+ RA+ FP+ A S P++ T S G S W+ Sbjct: 82 NRDLRMAMLNVEQARAQFQIQRANQFPTVNAIASGTRQPSVTTGSYANQFQVGLGISAWE 141 Query: 126 IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ID FG+ + E +LA + A++++++ + ++ +E + I+ + L+ Sbjct: 142 IDFFGRVAALKEQALAQYLATDEARKSAQISLVAAVASGWLTLMADEELLDISRRTLETR 201 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++++L+ L+ G +S+L + E+ ++ + ++ ++ + + LLG P + Sbjct: 202 DESVKLTRLRLENGVSSELDNRQAESLAQAARATYAQQQRQRMLDENALVLLLGQPLPDD 261 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + S + G+P+DL+ RPD+R E++L + A IG A++ +P +S Sbjct: 262 IRASLPSSRLADATPMQALPAGLPSDLLVRRPDVRMAEQQLIGANANIGAARAAFFPRIS 321 Query: 305 LNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L D F + +S P+L LPIFD G+ ++ + A + + ++++ Sbjct: 322 LTAQFGTVSDELSGLFKSGSWAFSLAPQLALPIFDAGRNQAGLESARAGREIAVAQYEKS 381 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + A +EV +AL ++ V + + K LS + YR G S LD+LD +R+ Sbjct: 382 IQTAFREVSDALAGQATLQEQVDAQRAQAQADAKRFELSDLRYRNGVASYLDLLDAQRSL 441 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L + + Q ++ V LY +G G+ Sbjct: 442 FATQQSLVVTRLQQLQNQVTLYKVLGGGWT 471 >gi|152987794|ref|YP_001348071.1| outer membrane lipoprotein precursor [Pseudomonas aeruginosa PA7] gi|150962952|gb|ABR84977.1| probable outer membrane lipoprotein precursor [Pseudomonas aeruginosa PA7] Length = 499 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 117/475 (24%), Positives = 228/475 (48%), Gaps = 53/475 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 GC +GP+Y +P + +P +F + D + WWE + D +LN L + Sbjct: 17 GGCAIGPDYQRPDL-AVPAEFKEAEGWRRAEPRDVFQRGAWWELYGDQTLNDLQMHLERS 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS--------- 122 N T+ Q+ + A+ + RA FPS ++ +ST +L Sbjct: 76 NQTLAQSVAQFRQAEALVRGARAAFFPSITGNVGKTRSGQGGGDSTVRLPDGSTVSSGGG 135 Query: 123 --------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 W++DL+G+ RR +E++ A+L ++ A + +L+ S+L +Y+ Sbjct: 136 SGAISNSYSTSLGVSWEVDLWGKLRRQLEANQASLQASAADLAAVRLSQQSQLAQNYLQL 195 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+I + + + Y+++++++ K+ G ++ + + ++KS ++ L+ Sbjct: 196 RVMDEQIRLLNATVAGYERSLKVAENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRA 255 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 H I+ L+G P +F N P +P + +P+ L+ RPDI E+ Sbjct: 256 QLEHAIAVLVGLPPAQF---------NLPPVASVPKLPELPAMVPSQLLERRPDIASAER 306 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 K+ + A+IG+AK+ +P L+L+ S +L++ S P N WS GP+ + +FD G Sbjct: 307 KVISANAQIGVAKAAYFPDLTLSAAGGYRSGSLSNWISTP--NRFWSIGPQFAMTLFDGG 364 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 I S + +AE++ + T+++TVL+ +EVE+ L ++ + + A+E ++++ Sbjct: 365 LIGSQVDQAEATYDQTVATYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREALR 424 Query: 399 LSMINYRQGRYSLLDILDIERATA--KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G D++ +ATA L++ +L S V L A+G G++ Sbjct: 425 LAENQYKAGTVDYTDVV-TNQATALSNERSVLTLLGSRLTAS-VQLIAAMGGGWD 477 >gi|85710951|ref|ZP_01042012.1| outer membrane protein OprN precursor [Idiomarina baltica OS145] gi|85695355|gb|EAQ33292.1| outer membrane protein OprN precursor [Idiomarina baltica OS145] Length = 460 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 120/467 (25%), Positives = 214/467 (45%), Gaps = 41/467 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-TLKWWESFNDTSLNKL 64 + +L + L+ C+ GP+Y KP SI S+ + L WW++F+D LN+L Sbjct: 8 STLALLVASLSACSAGPDYQKPEKV-----ESINLSQPYQQAEQALSWWQAFDDAELNQL 62 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD- 123 V+ AL++N T+ QA ++ A D +P ++ N N+ D D Sbjct: 63 VERALEENRTLAQARANVDRAYAVFRDADNDSWPKGTLETGYQASEN---NTLSADDDDV 119 Query: 124 ------------WKIDLFGQRRHIESSLANLDSAYAQVDI----AKLNVISKLIPSYIDA 167 W +DLFG+ R + + Q DI A++ +IS++ SY + Sbjct: 120 ITRGYSSGANLSWDLDLFGKLRRASEAAE---AQAQQADILWRDAQVQLISQVATSYGEY 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R+ +A + LD +++ + + G S+L L +++ ++ +++ +P ++ Sbjct: 177 RGAQLRLKVAEENLDNLQQSRAIVLARLEVGMASELELAQIDVQLHRVKASVPAYREALL 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +S LL + ++ + P L P+ + + +R+R D+ E+ LA Sbjct: 237 TVDATLSALLALEPGQ----LELSAEPELPGLKRPVAVVEGENYLRHRADVASSERLLAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-----THWSFGPKLYLPIFDKGKIKS 342 A IG+A +DLYP+LS+ G + S PG WS P L D +K+ Sbjct: 293 RTANIGVATADLYPNLSVRGFLGFL---SGPGLTLGSETQSWSVAPSLSWQAADLSSVKA 349 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 IR+AE+SAQ +++ V +AI E++ +L S N ++ + + KK++ ++ Sbjct: 350 RIRQAEASAQMALAQFEQQVFDAINEMQLSLNSYNLSREQQLNTEQQWQASKKAVEIARQ 409 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y G LD+LD ER + L+ + Q VD+Y G G Sbjct: 410 RYEAGSNEFLDLLDAERELLRSRDQLAQLQEQSFVRLVDIYRNFGGG 456 >gi|294792293|ref|ZP_06757441.1| RND efflux system, outer membrane lipoprotein, NodT [Veillonella sp. 6_1_27] gi|294457523|gb|EFG25885.1| RND efflux system, outer membrane lipoprotein, NodT [Veillonella sp. 6_1_27] Length = 566 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 113/426 (26%), Positives = 202/426 (47%), Gaps = 30/426 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------- 103 WW+ FND L++L+ + L+ N + A R+ + + A P AS Sbjct: 127 WWKVFNDPVLDQLIDLTLKNNRQLEVARSRVRQGRLQLGIAEAQRLPWLDASGSWSANRG 186 Query: 104 ---------------ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYA 147 IS + N++T G +D+ W+ID+FG+++ + +N L ++ A Sbjct: 187 QGEWDSDREAIKNLPISDKMTRNVETGKLG-IDARWEIDIFGRQKAKSRAASNSLQASQA 245 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + +++ ++ Y+ R +E++ I + ++ +EL + G ++L + + Sbjct: 246 DLYSTWVSLSAETALQYMSLRTLQEQLRITEDDVKRQQEALELIKINNQSGIINELPVQQ 305 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + +++IP+L+K+ + +S L G E + + N P + I IGI Sbjct: 306 ATYALSQTQAEIPSLKKNIASTMAALSILTGTVPGEIDGLLME--NTSLPTVNPHIFIGI 363 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHW 324 PA+ +R RPDI+ E+++A K AK+DL P SLNGSI L +S Sbjct: 364 PAEALRQRPDIQAAERRIAAQQQKTKAAKADLKPRFSLNGSIGLESFSSGGLISAIGKMI 423 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP + +PIF+ G I+ NI+ QE ++ETVL A+ EV NA+T ++D Sbjct: 424 GIGPSITMPIFNAGAIRKNIKVQTEKEQEYLALYEETVLKAVGEVRNAVTDASQDHIKSE 483 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L+ AVE +++ SL+ N+ G L +LD R +++ Q V L+ Sbjct: 484 ELKSAVESAQQAESLAQTNFDSGLSDYLSVLDARRNVLSARRQYIMSRGQEFADTVRLFK 543 Query: 445 AIGSGY 450 ++G G+ Sbjct: 544 SLGGGW 549 >gi|209517861|ref|ZP_03266695.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209501694|gb|EEA01716.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 508 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 115/480 (23%), Positives = 225/480 (46%), Gaps = 55/480 (11%) Query: 15 LAGCTVGPEYTKPHM---------PLLPTQFSI----GNSKNLINIDTLK--WWESFNDT 59 L C VGP++ +P + PL + + G +++ + D WW +F Sbjct: 36 LCACAVGPDFHRPDVTSVSSYTAAPLAASTVASDGPGGAAQHFVPTDLPGDGWWRAFGSP 95 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASIS------------- 105 +LN LV+ AL ++ T+ QA +++ A+++ + L+P + A++S Sbjct: 96 ALNALVQQALDESPTLAQARAKLDEAQQDYRAQAGGTLWPKADANLSATREKIDPEALGF 155 Query: 106 ------HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 F P T + Q+ + +DLFG RR +E+ A +D +++ A+L V Sbjct: 156 GQLAQGRSFAPF--TLYSAQVTVSYTLDLFGANRRALEAVAAQVDYQQYELEAARLTVAG 213 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + I +I++ +L + ++++ ++ G S++ L+ ++ + Sbjct: 214 NVVTAAIRRASLARQIALTEALLANQMQQLDIAEHRYRAGGISEVDLLSQRTLVQQTRAT 273 Query: 219 IPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL 271 +P L H ++ LG PAT L + + L +P ++ +P+ L Sbjct: 274 LPPLRTQLAQTDHQLAIYLGRAPADLPATTELAALDLDT------LVLPADLPLTLPSTL 327 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP 328 + RPDIR E L + A +G+A ++LYP ++L+GS A N G+N W+FG Sbjct: 328 AQQRPDIRASEALLHQASANVGVATANLYPRITLSGSAATERVNVSDLLTGFNV-WNFGA 386 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F G++ + R +E++ + +++TVL +++V +AL ++++D + L Sbjct: 387 GLTQPLFHGGELLARKRSSEAAYEAALAVYKQTVLQGLQQVADALRALDQDAIALQALDA 446 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A ++S ++ Y G S L +LD +R + +D + A Q LY A+G+ Sbjct: 447 AQRSAQRSADIASQRYAAGGISQLTLLDTQRQELQTGLDRTKAAAQRYADTAALYQALGA 506 >gi|148263365|ref|YP_001230071.1| RND efflux system outer membrane lipoprotein [Geobacter uraniireducens Rf4] gi|146396865|gb|ABQ25498.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter uraniireducens Rf4] Length = 523 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/486 (22%), Positives = 223/486 (45%), Gaps = 48/486 (9%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINID----------- 48 M L + + +V LAGC VGP++ +P P + Q++ G + I D Sbjct: 28 MRALIVVGGIALVSLAGCAVGPDFVRPAPPTV-EQYTHGTAPTTTIPADGQTQHFAKGAR 86 Query: 49 -TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASI 104 WW FN +N +V+ + N ++ A + +++N+ + FP +S+ + Sbjct: 87 IAADWWRLFNSAKINAVVQEVIANNPSLQAAQASLRQSQDNLRAGYGVFFPQVDASFDAA 146 Query: 105 SHRFIPNLKTNS--------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +F P S T Q + +D+FG +RR +E A +D A V L Sbjct: 147 RQKFSPARFGGSNPSIFNLFTLQASVSYALDVFGGERRAVEGLQAQVDVQRAAVLGTYLT 206 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ + I ++E I Q++D+ ++ + ++ + G +++ L +++ ++ Sbjct: 207 LSGNVVNTLIAQAAYREEIRATEQLIDMQREQVAITEAQTQAGTVPYANVLSLRSQLAAV 266 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 E+ +P L + H ++TL G ++ + ++ L +P + + +P++L+R Sbjct: 267 EATLPPLRQKLDQAGHLLATLAGRAPAQWAPPQLELAD-----LTLPRDLPVTLPSELVR 321 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---------DNSFPGYNTHW 324 RPDI E +L + A IG+A + L+PS +LNG + D+SF W Sbjct: 322 QRPDILAAEAELHGANADIGVATAALFPSFTLNGGYGFNNSTIGNLLKIDSSF------W 375 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S G + P+F G + A+ ++ +++TVL+A +V + L ++ D + + Sbjct: 376 SLGANVTAPLFRGGTLWFQREAAKERYRQSLAGYRQTVLSAFAQVADTLRALEHDAESLH 435 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +++ +++ L NYR G + L IL + ++ A+ Q + V L++ Sbjct: 436 AQSQSLDTADEALRLIQANYRAGTVNYLQILIANGQYHQAKIGWLRAQAQRFQDTVALFV 495 Query: 445 AIGSGY 450 A+G G+ Sbjct: 496 ALGGGW 501 >gi|107025977|ref|YP_623488.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116692838|ref|YP_838371.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105895351|gb|ABF78515.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116650838|gb|ABK11478.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 503 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 119/482 (24%), Positives = 218/482 (45%), Gaps = 53/482 (10%) Query: 13 VLLAGCTVGPEYTKPHM-----------PLLPTQFSIGNSKNLINIDT-LKWWESFNDTS 60 V LA C VGP++ +P P + +++ + D +W F D + Sbjct: 14 VTLAACAVGPDFKRPDTATAARFARDVRPATQRDAAPADTRTDTSPDADAAFWRGFGDPT 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP-------- 110 L +L+ AL N + A R +A+ + D +P+ AS I H+ + Sbjct: 74 LTRLIDAALAANQDLQVAVSRYDASNALLSQATFDRYPTITASGQIGHQLMSKDQAFGAP 133 Query: 111 ----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + T++ G +++ W++DLFG+ RR IES A ++ A V ++ + ++ +Y+ Sbjct: 134 RSQRDTPTSNVG-INAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAGEVASTYV 192 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R +ER+ IA + D K+ + L + + G S+L + A+ +S S I E + Sbjct: 193 DLRGSQERLRIARENADNQKQTLALINARVGAGRGSELDAARARAQYESTTSRIAVYEAA 252 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-------PNLYIPINIGIPADLIRNRPDI 278 ++ H ++ L G + P L I+ G P DL+R RPD+ Sbjct: 253 IGVDEHRLAVLTGQTPDALIGRFDLPKTGTPTGTPVPLPALAADIDPGTPGDLLRRRPDV 312 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGP 328 E +L + A++G+A +DL+P +L+G + T F G +T+ WSF Sbjct: 313 AAAEARLHAATARVGVATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDWSF-- 370 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 D G++++ I +++ A Q +++TVL A++E ENAL + + L Sbjct: 371 ------LDVGRVRARIAASDAEAAGQLAQYRQTVLGALEETENALLRVARTRDETAHLVR 424 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A + ++ L+ + G ++LD +R + + + + + A S V LY A+ Sbjct: 425 AADDSARAAQLAQARFSAGAIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYKALAG 484 Query: 449 GY 450 G+ Sbjct: 485 GW 486 >gi|73543124|ref|YP_297644.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72120537|gb|AAZ62800.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 496 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 127/467 (27%), Positives = 210/467 (44%), Gaps = 37/467 (7%) Query: 14 LLAGCTVGPEYTKP------HMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLN 62 +L GCT+ P+Y +P P P ++ G ++ +I W E F D L Sbjct: 14 VLTGCTLAPKYERPVPPVAAGFPGAPEGYATAEVKSGETRRATDIG---WREFFRDPRLQ 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNST--GQ 119 L+ +L+ N + QA RI A+ RADL P+ A+ + R + +T GQ Sbjct: 71 TLIATSLENNRDLRQAALRIEEARSLYQIQRADLLPTVNANAGYTRARTSAAQTATVLGQ 130 Query: 120 LD-----------SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 S +++D FG+ R + ++LA + A ++++S++ +Y+ Sbjct: 131 PSVSDLYSVGLGISSYELDFFGRVRSLSNAALAQYFATEEAHRSAYISLVSEVAKAYLSE 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R F E+ IA L + L+ +F GATS L L E+ + L + Sbjct: 191 RSFAEQYEIARDTLKARESTYALAKQRFDVGATSALDLRDNESLVAQARVSAAQLARQRA 250 Query: 228 MNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + L+G P + E L + S+ + I G+P+DL+ RPDIR E+ L Sbjct: 251 QAQNALEVLVGKPIGSIENLPEPMRLSDE---RIISDIPEGLPSDLLEQRPDIRQAEQLL 307 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P ++L G+I+ T F WSF P+L LPIFD G+ KS Sbjct: 308 LSANANIGAARAAFFPRITLTTNIGTISPTFSGLFDAGTKAWSFAPQLTLPIFDYGRNKS 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A + +++T+ A EV +AL + + V + L+ + Sbjct: 368 NLDLANVRKNIEVANYEKTIQTAFAEVADALVARGTLEDQVAGQEQVRNAEAARYELARL 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R G S LD LD +R E L A++ + +DLY ++G G Sbjct: 428 RFRSGVASYLDELDAQRQLFTAEQALIQARQLRLNNSIDLYRSLGGG 474 >gi|73540275|ref|YP_294795.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72117688|gb|AAZ59951.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 486 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 131/471 (27%), Positives = 224/471 (47%), Gaps = 41/471 (8%) Query: 1 MNILRAIFSLFIV------LLAGCTVGPEYTKPHMPLLPT--------QFSIGNSKNLIN 46 MN L SL V LLAGC VGP+Y +P P P + G K Sbjct: 4 MNPLSRFLSLGAVPLACALLLAGCAVGPDYQRPDAPTSPAFKEAPADAEGWTGEWKTAEP 63 Query: 47 IDT---LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS 103 D +WW+ F D+ L+ L+ N I A + A+ ++ + RA FP+ A Sbjct: 64 QDAHARPQWWQVFGDSQLDGLMSQVQISNQNIKAAEAQYRQAQASLQAARAGFFPTVDAQ 123 Query: 104 ISHRFIPNLKTNS-TGQ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 N+ +GQ L + W++D++G+ RR +ESS AN ++ A + L+ + Sbjct: 124 AGVSRARGASGNTISGQSVTLGATWELDVWGRVRRQVESSEANAQASQADLASTLLSTQA 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L SY R + ++ + + Y K+++L ++ G + +++ E ++KS ++ Sbjct: 184 TLAQSYFLLRIADAQKALLDRTVADYAKSLQLVQNQYKAGTAQRSDVLQSETQLKSAQAQ 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 ++ + H I+ L+G P E L Q + P + + +P+ L+ RPDI Sbjct: 244 QLDIQITRAQLEHAIAVLIGKPPAE-LSVGQADFASTPPR----VPVAVPSQLLERRPDI 298 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLP 333 E+++A + A+IG+A++ YP+LSL+ S LT S P + WS G L Sbjct: 299 GAAERRMASANAQIGVAQAAYYPTLSLSASGGLTASTLARWVSLP--DRIWSVGAGLAGT 356 Query: 334 IFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTS--INEDKKIVTKLQHAV 390 +FD G ++S + +A +Q + +++TVL A +EVE+ L + + E + +V AV Sbjct: 357 LFD-GGLRSAAKAQAVAAYDQTVANYRQTVLGAFQEVEDNLAAQRLLEQESVVQN--DAV 413 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYV 440 +++++L YR G SLLD+L + E L++ RQ S V Sbjct: 414 RAAREALALVNNRYRAGTASLLDVLVAQTTAYTAERTALTLMGRQYTASVV 464 >gi|302187948|ref|ZP_07264621.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. syringae 642] Length = 477 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 127/471 (26%), Positives = 218/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQMVGPDYQLPKEGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 64 QDAHLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A + V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTAHITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P + + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGV--STCNELPQIAQVMPVGDGAALLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|302343610|ref|YP_003808139.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301640223|gb|ADK85545.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 489 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 120/479 (25%), Positives = 227/479 (47%), Gaps = 45/479 (9%) Query: 6 AIFSLFIVLL--AGCT-VGPEYTKPHMPL-LPTQFSIGNSKNLINIDTL-KWWESFNDTS 60 A+ +VL AGC +GP+Y +P P +P + +++ I I +WWE+F D Sbjct: 10 ALAGALVVLGLNAGCMKLGPDYQRPEPPAKIPAAYDQAANQSAIAIAQPDRWWEAFGDPE 69 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN----- 115 LN+LV++A+ +NL + +AT R+ + RA+ +P AS + + + Sbjct: 70 LNRLVELAVARNLDLAKATARVQELQALFSQSRAERYPQISASGTGQRQRAKSMSLEQGG 129 Query: 116 -STGQLDSD---------WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSY 164 S G +++D +++DL+G+ +E ++ +L +A VI+ ++ S+ Sbjct: 130 ISVGAVETDSYNLAVAASYEVDLWGRLARLEQAARGDLLAAQETRRTVAQTVIASVVTSH 189 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + R+ +A ++ Y++++E ++ +G TS+L+L + + + ++ +P+L + Sbjct: 190 LTIQTLERRLQVAQSSIEAYQRSMEFVEGRYRRGLTSELALRQARRALANAKAGLPSLRQ 249 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRY 280 N++ L+G Y + Q QP Y + G+P++L+ RPD+R Sbjct: 250 DLGQAQQNLAVLVG-------AYPKVQPARAQPADYFKQLPAVPAGLPSELLLRRPDLRA 302 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDK 337 E L A+IG AK+ +P++SL D + N W+ L P+FD Sbjct: 303 AEHTLQALSARIGAAKAARFPTISLTAQGGYASDQLESLIRPDNALWNAALGLTAPLFDA 362 Query: 338 GKIKSNIRRA-ESSAQEQY----ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 G +RRA + +AQ +Y W + VL A EVE AL + E +Q A+ Sbjct: 363 G-----LRRAKQDAAQARYDQGVADWAKQVLTAFSEVEGALLTRREQLTRRELVQKALAE 417 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y +G LD+L+ + +E L + + + V L+ A+G G++ Sbjct: 418 AVATQEAAQRRYMRGLSDYLDVLEAQYTRYNLEDQLVLTDYAILSNRVSLHRALGGGWD 476 >gi|94314509|ref|YP_587718.1| NodT family outer membrane lipoprotein [Cupriavidus metallidurans CH34] gi|93358361|gb|ABF12449.1| RND efflux system, outer membrane lipoprotein, NodT family [Cupriavidus metallidurans CH34] Length = 485 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 128/472 (27%), Positives = 228/472 (48%), Gaps = 42/472 (8%) Query: 13 VLLAGCTVGPEY-TKPHMP---LLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + AGCTVGP+Y P + + +F G + WW + DT L+ L++ Sbjct: 16 MFAAGCTVGPDYRGAPQVAGNAIDTGKFPRAGEGTDSQTPRVADWWHALGDTQLDGLIES 75 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ----- 119 AL+Q+ I A R+ A+ + +A+LFP+ A++ R PNL S GQ Sbjct: 76 ALKQSPDIRVARARVRQARAGLAGNKANLFPTVAVDAATLRTRS-PNLSALS-GQGSSNA 133 Query: 120 -----------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 D+ W+IDLFG RR IE++ A D+A AQ+ A + + +++ +YI Sbjct: 134 GRGPLSLYIAAFDASWEIDLFGGTRRSIEAASAEADAADAQLADAHVQLAAEVAQAYITL 193 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R +E ++ L + EL+ + +G S+L + +L ++ + + + ++ S Sbjct: 194 REQQESLAHLTSSEQLEAEMFELTQQRRARGVASQLEVERLMTQLDNTRAQMSPVQASIA 253 Query: 228 MNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKK 284 ++ ++ L G P T + + + +P +P + +G P L+++RPDIR E++ Sbjct: 254 ESLDQLAMLTGRSPGT-----LDAELSAPKPLPGVPETVAVGDPGALLKSRPDIRAAERR 308 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGK 339 LA S A+IG+ K+D +P LSL GS+ + P + N W P+L I D G+ Sbjct: 309 LASSTAQIGVRKADWFPKLSLLGSLGFAATD--PSHLARKENGTWMTLPRLQWNILDFGR 366 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + + AE E +++ VL A+++ + AL+ ++ V L+ +++ +L Sbjct: 367 VAAGVEGAEGGRDEAEASYESVVLKALRDADVALSRYGHQREHVVVLRRVEASAERASTL 426 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S+L+ LD+ER + L K +V L ++G G+ Sbjct: 427 QQQRYRAGTASMLEWLDVERTRVVAQQSRISGDADLLKDFVSLQKSLGLGWQ 478 >gi|330976074|gb|EGH76140.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 472 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 30/471 (6%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESF 56 LR F +L+ C VGP+Y P + P L + + G S N ++ WW + Sbjct: 5 LRVAALGFTAVLSACQMVGPDYQLPKDGAINRPDLQGELA-GRSVNTVSAPVPAHWWRLY 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------- 109 D L++LV A+ N + A + A+ A ++ A I + + Sbjct: 64 QDARLDELVGQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAF 123 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ Sbjct: 124 LLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVR 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E + IA + L+L K+++ L+ G + + + + + KS+ +++P Sbjct: 183 AYTQICAANEELDIARESLELQKQSVSLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRY 242 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + +S LL P + + + N P++ + +G A L++ RPD+R E Sbjct: 243 EARRQAAMFRLSMLLAKPVEQLPAGVS--TCNQLPHIAQVMPVGDGAALLKRRPDVRQAE 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA S A+IG+A +LYP +S+ SI T + P N W FGP L I G Sbjct: 301 RHLAMSTAEIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +AE+SAQ + VLNAI+E + L L+ A + K++ Sbjct: 360 -RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKDAEQSAKEAADQ 418 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 419 THRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 469 >gi|218261701|ref|ZP_03476436.1| hypothetical protein PRABACTJOHN_02104 [Parabacteroides johnsonii DSM 18315] gi|218223835|gb|EEC96485.1| hypothetical protein PRABACTJOHN_02104 [Parabacteroides johnsonii DSM 18315] Length = 467 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 204/414 (49%), Gaps = 16/414 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 +WW++FND +L+ L+++A++QN +IL A +RI AK N+ + P+ Sbjct: 52 QWWKNFNDPTLDSLIEVAVKQNYSILMAADRIAMAKANLRIQQGSYSPTLGLAAGWTRQQ 111 Query: 102 ASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +S +P T S L +W+ID+FG R +++ N ++ + +++ ++ Sbjct: 112 SSGHTSNLPQTITQYSDAALSMNWEIDVFGSIRNRVKAQKENFAASKEDYNAVMVSLCAQ 171 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI+ R ++ + + + + ++++ ++ G SKL + + + ++ + Sbjct: 172 VASAYINLRELQQEVEVVKKNCLSQQAVVKITEKRYETGLVSKLDVAQALSVYYDTKASL 231 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 P LE + + L+G + M+ + P I IGIPA+L+ RPDIR Sbjct: 232 PMLEAGIIQYTNALGVLMGLYPWDVREIMETRKP--LPEYIETIGIGIPANLLLRRPDIR 289 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLYLPIFD 336 E+ + A +G +KSD +P + + GS+ +HD + +N+ + P + F Sbjct: 290 AAERLVNARAASLGASKSDWWPKVFVKGSVGFASHDLDKLVNHNSFTYEIAPAISWNFFQ 349 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 K+ R A++ E + + VL A++EV+NA+ S K + L+ V K++ Sbjct: 350 GTKLAQATRLAKAQLDESIRQFNQDVLTAVQEVDNAMNSYKNSIKQIVALREVVNQGKQT 409 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS+ Y+QG ++LD +R+ E +L+ A+ S + LY A+G G+ Sbjct: 410 LELSLDLYKQGLTPFQNVLDAQRSLLSYENELTQARGSSLLSLIQLYQALGGGW 463 >gi|94310650|ref|YP_583860.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354502|gb|ABF08591.1| outer membrane heavy metal efflux protein [Cupriavidus metallidurans CH34] Length = 519 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 127/465 (27%), Positives = 225/465 (48%), Gaps = 24/465 (5%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFS---IGNSKNLIN-IDTLKWWESFNDTSL 61 + L +LAGC VGP++ +P Q++ IG + + D +WW+ FND L Sbjct: 10 CWMLAATMLAGCARVGPDF-QPQHETWSGQWTSEAIGQASEAGDQPDMRQWWQVFNDPVL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ- 119 L+ A + + A R+ A+ + A +P A ++ + ++ T Q Sbjct: 69 EHLITEADANDAGVRIAGLRVMEARAQLGMALAGRYPQMQQAGADAMYVHSRQSGPTAQT 128 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +D W++D +G+ R IES+ A +A A + + + ++L +Y R Sbjct: 129 ARVWEYSAGVDVGWELDFWGKFARAIESADAAYFAAQANHENVLVLLHAQLAQTYYALRT 188 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R+ IA + L K++ E++ F G + +L L + + + S IP LE+ ++ Sbjct: 189 AEARVRIARENARLQKRSYEITERLFKAGESDELDLQQAKTQYFGTLSSIPELERQIALS 248 Query: 230 VHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LLG P + P + I +PA+L+ RPDIR E ++A Sbjct: 249 RNAVAILLGRPPGPIPELGEASGKEGVLPRIDRAILQDVPANLLLRRPDIRAAEFQIAAQ 308 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRR 346 A+IG+AK+DLYPS++L GSI + S PG GP L IFD G+I +N+R Sbjct: 309 SAQIGVAKADLYPSVTLVGSIGWSA-TSLPGTQNGLLLVGGPSLRWNIFDYGRIHNNVRV 367 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ Q+ +T+Q V A +E ++A + + + + L+ A ++S++L+ +++ Sbjct: 368 QDARLQQLILTYQNDVRVAAREADDAASGLLKALEREEILREAAYSAERSLTLANTLFKE 427 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSY-VDLYIAIGSGY 450 G +LD +RA + D + R A Y +DLY A+G G+ Sbjct: 428 GYSDFQRVLDAQRALF-AQQDAYLVNRSNAVGYLIDLYKALGGGW 471 >gi|330819211|ref|YP_004348073.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|327371206|gb|AEA62561.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] Length = 556 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 132/510 (25%), Positives = 233/510 (45%), Gaps = 79/510 (15%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF---------------SIG-NSKNLINIDT-LKWWESFN 57 LA CTVGP++ KP P Q+ + G S +++ D +WW +F+ Sbjct: 29 LAACTVGPDF-KPPQANAPAQWHDLQAASAAAATSASAPGVTSSPVVDADPDPRWWRAFH 87 Query: 58 DTSLNKLVKIALQQNLTILQATERI--------NAAKENILSVRADL------------- 96 D L++LV A + NL + A RI AA + + +VRA Sbjct: 88 DPLLDQLVDRAARDNLDVQTAVMRIAEAREQLHQAAAQGLPNVRATASYQREQLGIKGIL 147 Query: 97 -------------FPSSYASI------------SHRFIPNLKTNST---GQLDSDWKIDL 128 P S + + + I +L + + D+ W++DL Sbjct: 148 QDEGVNDQIDRLSAPGSALAGAVPGGGAAIRQGADKAIDSLSSPTNLWQAGFDASWELDL 207 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ RR +E++ A +A A D A L++ +++ +Y+ R + ++ ++ + Sbjct: 208 FGRVRRSVEAAGAETGAAVAGRDDALLSLEAEVAQTYLQYRGAQALRALTLELAQSQQDF 267 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPAT--EF 244 ++L+ + G TS+L + +A + I + +P ++ M + ++ L+G P T E Sbjct: 268 LDLTRDRAAHGLTSQLDVRSADARLAQIRAQLPQYDQQLAMLRNGLAYLVGGAPGTLDEL 327 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L ++ P L + +G+P+ L R RPD+R E +L + A++G+A + YP +S Sbjct: 328 L-----EAPAALPGLPPTVPVGLPSTLARRRPDVRRAELELHAATAQVGVAVAQFYPDIS 382 Query: 305 LNGSIAL--THDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G I L TH ++ +S GP + LPIF G + SN+R +++ QE + ++ Sbjct: 383 LTGQIGLRSTHVRELAQWSHLFYSAGPAISLPIFQGGALVSNLRLSKAQQQEAALAYRRA 442 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL A+++V+NAL D+ L A ++ L+ +YR+G LD+LD ER Sbjct: 443 VLVALRDVDNALAVYRTDQSRHAALDDAARAEGGALDLARDSYRKGIVPYLDVLDAERQW 502 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Q V LY A+G G+ Sbjct: 503 SEARQQALQGAVQTTTDLVSLYKALGGGWQ 532 >gi|261339746|ref|ZP_05967604.1| RND efflux system, outer membrane protein, NodT family [Enterobacter cancerogenus ATCC 35316] gi|288318576|gb|EFC57514.1| RND efflux system, outer membrane protein, NodT family [Enterobacter cancerogenus ATCC 35316] Length = 459 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 33/468 (7%) Query: 3 ILRAIFSLFIV-LLAGCT---VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 ILR + L I LL GC V P + H +P Q+ + WW +F+D Sbjct: 2 ILRPLVGLLIAALLGGCQSVDVKPAQSTLH---IPAQWRAATGPG--SATEQLWWRNFHD 56 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FI 109 + LN+ V +AL+ N +L A ERIN + + + LFPS AS++ + Sbjct: 57 SYLNRYVDLALENNSDVLIARERINEYQARVYAADGSLFPSLDASVTGTRARSQSAATGL 116 Query: 110 PNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + G L + + +D++G R ++ A+L++ A A L V S + Y+ Sbjct: 117 PVYGSLYKGSLTASYDVDIWGVNRSTANAAEASLEAQKAAAAAADLTVASSVASGYVTLL 176 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ + L ++ L+ +F G +S+L L++ ++E+++ + +P ++ Sbjct: 177 SLDAQLQVTQSTLKSREEAFNLARRQFETGYSSRLELMQSDSELRATRAQVPLIKHQIAQ 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLA 286 + +S LLG E +S +F ++ P + +P+ L+ RPDI E+ L Sbjct: 237 QENALSVLLGTQPGEV-----ARSESF--DVLTPPKLPSQLPSTLLNRRPDIVQAERALV 289 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 S A + +++ L PS++L + ++ D + G + WS G + P+ ++ + + Sbjct: 290 ASDATLAASRASLLPSINLTATGSV-QDRTLSGLLDNPLQLWSAGGSILAPLLNRQALNA 348 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + ++S + T+++TV NA EV ++L +I ++ +T+L + ++++ ++ Sbjct: 349 QVDISQSQRNQALYTYEKTVRNAFVEVNDSLDAITRYQEQLTELLAQQAVSQETLRIAQN 408 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S LD+LD +R V+ ++ K L + +DLY A+G G+ Sbjct: 409 RYRNGYSSYLDVLDAQRTLYSVQTNVVQVKNNLLLAQIDLYKALGGGW 456 >gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] gi|112800533|gb|EAT97877.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter concisus 13826] Length = 460 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/461 (25%), Positives = 225/461 (48%), Gaps = 23/461 (4%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +A + LAGC+ +P MP + T F+ + +I L WW+ F D +LN L Sbjct: 4 KAFILITAAFLAGCSF-----RPDMPNVDTNFTSTYTFETSDIRDL-WWKEFKDENLNIL 57 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----- 119 V+ AL++N + A + AK ++ A L P ++S+ TGQ Sbjct: 58 VESALEKNTNLRIAYLNLEKAKASLGVAEASLLPGVNLNVSYTKAKTSGETYTGQPQTRY 117 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L +++IDL+G+ R + ++ NL+++ D A+L++ S + SY Sbjct: 118 RSSSINLGLNYEIDLWGRVRNSVLAANENLNASKFDYDSARLSLSSSVAKSYFALVSLNM 177 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + ++ + L Y+ + L + G ++++ ++ +AE++ ++ + ++ S + + Sbjct: 178 QEAVLKETLKTYEDTLALRKTQLDLGGINEMTYLQSKAEVERAKTSLTSVLNSKSQALTS 237 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L G E L + N + I GI +D++ R D+ L + A + Sbjct: 238 LAILTGKSNDEILKGAVASAQNLPSS--PEIKAGISSDVLLRRSDVAKALADLKATNALV 295 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+AK+D +P++SL G + T +N F G W+ G L IFD G+ K+N+R AE+ Sbjct: 296 GVAKADYFPTISLTGLLGFTSIDFENIFVGNANTWNIGGSLAQKIFDYGRTKNNVRVAET 355 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + Q +T++ TV +A+ EV +AL S K + ++++ ++ +K SL+ Y G Sbjct: 356 NEQIAAVTYEATVRSALGEVRDALISRQNAKLSLDQVKNLLQSQQKIYSLAKDQYNAGYI 415 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD +R + ++ AK S V++Y A+G G+ Sbjct: 416 GHLELLDAQRNLLQAKLQDISAKLDEVDSAVEVYRALGGGF 456 >gi|270296711|ref|ZP_06202910.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272698|gb|EFA18561.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 477 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/420 (25%), Positives = 202/420 (48%), Gaps = 28/420 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 KWW++F+D L+ L+ +A QN ++L A R++ AK N+ R FPS Sbjct: 61 KWWKAFDDPMLDSLITVASTQNYSVLSAMARMDMAKSNLRIERGSFFPSISLDGGWARQQ 120 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +S + +P T + + L++ W++D+FG R+ +++ ++ + +++ ++ Sbjct: 121 SSGNVNALPQSITGAYSASLNASWELDVFGSIRQRVKAQRETFMASKEEYTSVMVSLCAQ 180 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI R ++ +S+ + ++ +++ G SKL + + ++ S ++ I Sbjct: 181 IASAYIGLRELQQELSVVTHNCHTQAAVLNITEVRYKTGLVSKLDVSQAKSVYYSTKASI 240 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P LE + ++ LLG YP + + + ++ P+ PI IG+PADL+ RPDI Sbjct: 241 PQLEAGINQYITTLAILLGTYP--QHIRPILEKPGKL-PDYMEPIGIGVPADLLLRRPDI 297 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKL 330 R E+++ A +G ++SD P + L GSI LT NS + P + Sbjct: 298 RQAERQVNAQAATLGASQSDWLPQVFLKGSIGYSSHDLKDLTKRNSM-----TFEIAPSI 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +F K + R A + E + +TVL A++E +NA+ S + + ++ Sbjct: 353 SWTLFSGTKQVNATRLARAQLDESIHQFNQTVLTAVQETDNAMNSYRNSIQQIVAMREVC 412 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++++ LS+ Y+QG ++LD R+ E L A+ + LY A+G GY Sbjct: 413 NQGEETLKLSLDLYKQGLTPFQNVLDALRSLLTYENQLVQAQGSSLLHLIALYQALGGGY 472 >gi|224539974|ref|ZP_03680513.1| hypothetical protein BACCELL_04886 [Bacteroides cellulosilyticus DSM 14838] gi|224518400|gb|EEF87505.1| hypothetical protein BACCELL_04886 [Bacteroides cellulosilyticus DSM 14838] Length = 490 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/455 (23%), Positives = 217/455 (47%), Gaps = 40/455 (8%) Query: 27 PHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLVKIALQQNLTIL 76 P+ +PT NS D L +WW++FND L+ L+ +A +N ++L Sbjct: 42 PNSKTVPTSTGTANSTTASADDNLFSGQILPVDDQWWKAFNDPVLDSLISVASGENYSVL 101 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL------------DSDW 124 A +R+ A+ ++ R++ FPS S++ ++ + +T +L ++ W Sbjct: 102 AAIDRMEQARASLRMERSNFFPS--ISLNGGWLRQQSSGNTTELPQSITHYYDASLNASW 159 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++D+FG R+ +++ ++ + ++++ +++ +YI+ R ++ + + Sbjct: 160 ELDIFGSIRQRVKAQRETFQASREEYISVQVSLCAQVASAYINLRELQQELQVVMHNCRT 219 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + ++ +++ G SKL + + ++ S ++ +P LE +++++ LLG E Sbjct: 220 QEEVLNITEVRYNTGLVSKLDVAQAKSVYFSTKASVPQLESGISQYINSLAILLGTYPQE 279 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 +++ P+ P+ +G+PADL+ RPD+R E+ + A +G +KSD P + Sbjct: 280 IRPTLERIGK--LPDYMEPVGVGLPADLLLRRPDVRQAERLVNAQAALLGASKSDWLPQV 337 Query: 304 SLNGSIA--------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L GS+ LT S + P L +F K+ + ++A + E Sbjct: 338 FLKGSVGYAARDLKDLTRRKSM-----TFEIAPTLSWTLFSGTKLVNATKQARAQLDEAV 392 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + ETVL A++E +NA+ + K + L+ ++++ LS+ Y+QG ++L Sbjct: 393 HNFNETVLTAVQETDNAMNNYRNSIKQIVALREVRNQGQETLKLSLELYKQGLSPFQNVL 452 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D R+ E L+ A+ V LY A+G GY Sbjct: 453 DALRSLLTYENQLTQAEGSSLLYLVSLYQALGGGY 487 >gi|291614458|ref|YP_003524615.1| RND efflux system, outer membrane lipoprotein, NodT family [Sideroxydans lithotrophicus ES-1] gi|291584570|gb|ADE12228.1| RND efflux system, outer membrane lipoprotein, NodT family [Sideroxydans lithotrophicus ES-1] Length = 488 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 228/468 (48%), Gaps = 28/468 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKN-----LINIDTLKWWESFNDTSL 61 L +LA C GP+Y +P M L P + + N ++ + + +WW + DT+L Sbjct: 15 LTACVLAACASGPDYKRPDMVLPESWPAKQAGQNDQDEKAAVKTSSASEQWWHLYADTTL 74 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRF---- 108 ++L AL N I A R+ + AD +P+ A +++ F Sbjct: 75 DQLEDEALAHNSDIQVAAARVLEMQAQAGITGADQYPTVSAHVLQSRTENTLAGAFPRPA 134 Query: 109 -IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + S LD+ +++DL+G+ RR E++ A+L SA + D +L + +++ Y Sbjct: 135 TLPRTQNLSHASLDASYELDLWGKLRRASEAARADLLSAESARDTVRLTLTTQVAQQYFS 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + ++L ++ I L+ + G S+ L + EA++ +++S + +L+ + Sbjct: 195 LVSLDAQEVALQRLLASRQERIGLNRKQLEVGVISEYDLHQAEADVAAVQSQLSSLDLAR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ LLG + + ++ + P +P G+P+DL+ RPD++ E++L Sbjct: 255 NKQETALTLLLGRSPRDVMSSSVQRGSPLLPATTVPD--GLPSDLLLRRPDLKDAEQRLV 312 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A+IG+A++ +PS+SL G ++ + F G + F + PIF+ G++ Sbjct: 313 SLNARIGVARAQYFPSISLTSYVGGESVAFSDLFTGPARIFQFAANVTQPIFNAGRLGYL 372 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + AE+ + I +++ V NA +V NAL + + +++++ E + + + + Sbjct: 373 VDAAEARRDQALIQYKQAVANAFGDVRNALAAQDSARQVLSYETARSEALESAYKQAELR 432 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S L++LD+ER + +++ A+R + DL+ A+G G+ Sbjct: 433 YKAGIASRLELLDVERNYLQAQLNRLDAERAQRSAVADLFKALGGGWQ 480 >gi|323527225|ref|YP_004229378.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323384227|gb|ADX56318.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 506 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/463 (25%), Positives = 218/463 (47%), Gaps = 34/463 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN--------------SKNLINIDTLKWWESFNDTSLN 62 GCT+ P+Y +P P+ T F G S N + + W + F D + Sbjct: 17 GCTMAPKYERPAAPVTST-FPTGGVYDAQPGAAQPGARSANGMAAADIGWRDFFVDPRMQ 75 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-------NLK 113 +L++IAL+ N + + + A++ VRA LFP+ + AS + + P N Sbjct: 76 RLIEIALKNNRDLRVSVLNMQASQAQFRIVRAGLFPTLDAAASQTKQRTPKNLSVFGNTI 135 Query: 114 TNS-TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +NS + L++ W+ID FG+ + + + +LA + A+++++S++ Y+ Sbjct: 136 SNSYSVGLNASWEIDFFGRVQSLKDQALAQYLATTQARKAAEISLVSQVANQYLTVLELD 195 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + + + L +++ ++ L+F G S+L L + + ++ +++ + E+ R Sbjct: 196 DLLKVTQGTLKTAEESYRITKLQFDNGTGSELDLRQAQTVVEQAGANLQSQER-LRAQAE 254 Query: 232 N-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 N + LLG P L S+ NL I G+P+DL+ RPDI E+ L + A Sbjct: 255 NALVLLLGEPLPADLPPGLTLSDQ---NLLTDIPAGLPSDLLTRRPDIMEAEENLLAANA 311 Query: 291 KIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL GS T F + WSF P + LPIF+ G+ K+N+ A Sbjct: 312 NIGAARAAFFPKVSLTGSFGTLSPTLGGLFKPGSAAWSFAPSITLPIFEGGQNKANLDLA 371 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 Q T+++ + A +EV +AL + + + L+ ++ + LS + Y G Sbjct: 372 NIQKNAQIATYEKAIQTAFREVADALAARGTYDQQIQSLERNTFAQQRRLDLSNLRYTNG 431 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + + L A+ + ++ V LY A+G G+ Sbjct: 432 VDSYLSVLTAQTDLYSSQQSLITARMERLQNLVTLYQALGGGW 474 >gi|333031282|ref|ZP_08459343.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides coprosuis DSM 18011] gi|332741879|gb|EGJ72361.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides coprosuis DSM 18011] Length = 459 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 119/460 (25%), Positives = 233/460 (50%), Gaps = 39/460 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 I+ L+ C VG YT+P + L P G ++ I++ L WW+ + D L L++ AL+ Sbjct: 18 IITLSSCKVGKSYTRPDVAL-PDSLIAG--QDSISMSDLAWWQIYTDPLLVSLIEQALEY 74 Query: 72 NLTILQATERIN--AAKENILSVRADLFPS--SYASISHRFIPNLKTNST------GQLD 121 N +L A R+ AAK+ I + A+LFP + AS+ + + N+T G + Sbjct: 75 NKDVLIAATRVKELAAKKRIDT--ANLFPQLDAGASVYTKATRDEDGNTTNSHSYSGNIA 132 Query: 122 SDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DL+G R + S+A L S AQ I +L +IS++ +Y + + I Q Sbjct: 133 LSWELDLWGNLRWSRQVSIAEYLQSIEAQRAI-QLTIISEVAQAYYELIALDAEMEILQQ 191 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 L+ K +I L+ ++F G TS++ + + E+ + IP E++ + + ++ L+G Sbjct: 192 TLEDRKASIRLARIRFEGGLTSEIPYQQAQVELARTATMIPEQERAITLKENELAFLIGS 251 Query: 239 YP-------ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 YP + E L+ +++ + G+P+ L+ RPDIR E+ L + A Sbjct: 252 YPKKINRSKSLESLYSIEE------------LPYGLPSQLLERRPDIRGAEQSLIAAHAS 299 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESS 350 +G++ ++++P +SL G + + T +S L P+F GK ++ + +++ Sbjct: 300 VGVSYTNMFPRISLTGKVGSDNSELSSFLKTPYSLIEGALVTPLFQMGKNRAAWKAQKAA 359 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ ++++TVLNA E +N++ + N+ +++ + H +K + + + Y G + Sbjct: 360 YEQELYSYEKTVLNAFIETQNSIVNYNKQREVHSLKSHLERSAQKYVEFARLQYINGAIN 419 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD +R ++ L+ A R + + LY +G G+ Sbjct: 420 YMDVLDAQRGYLDAQIGLNNAVRDELLAVIQLYKTLGGGW 459 >gi|170693463|ref|ZP_02884622.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170141618|gb|EDT09787.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 509 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 121/472 (25%), Positives = 215/472 (45%), Gaps = 41/472 (8%) Query: 13 VLLAGCTVGPEYTKPHMPL---LPTQF-------------SIGNSKNLINIDTLKWWESF 56 + AGCT+ P+Y +P P+ PT S S N + + W + F Sbjct: 13 LFAAGCTMAPKYERPAAPVTSNFPTGGVYETQPGATQPGQSGARSANGVAAADIGWRDFF 72 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-------------S 103 D + +L+ IAL+ N + + + A++ VRA LFP+ A S Sbjct: 73 VDPRMQRLIDIALKNNRDLRVSVLNMQASQAQFRIVRAGLFPTLDAAASQSKSRTPENLS 132 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 ++ R I N + S G L++ W+ID FG+ + + + +LA + A++ ++S++ Sbjct: 133 VAGRTISN--SYSVG-LNASWEIDFFGRIQSLKDQALAQYLATAQARKAAEIALVSQVAN 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ + + + L +++ ++ L+F G S+L L + + ++ +++ Sbjct: 190 QYLTVLELDDLLKVTQGTLKTAEESYRITKLQFDNGTGSELDLRQAQTVVEQAGANLQAQ 249 Query: 223 EKSFRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 E+ R N + LLG P L S+ NL I G+P+DL+ RPDI Sbjct: 250 ER-LRAQAENALVLLLGEPLPADLPPGLTLSDQ---NLLTDIPAGLPSDLLTRRPDIMEA 305 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+ L + A IG A++ +P +SL GS T F + WSF P + LPIF+ G Sbjct: 306 EENLLAANANIGAARAAFFPRVSLTGSFGTLSPTLGGLFKPGSAAWSFAPSITLPIFEGG 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K+N+ A Q T+++ + A +EV + L + + + L+ ++ + Sbjct: 366 QNKANLDLANIQKNAQIATYEKAIQTAFREVADGLAARGTYDQQIRSLERNAFAEQRRLD 425 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y G S L +L + + L A+ Q ++ V LY A+G G+ Sbjct: 426 LSTLRYTNGVDSYLSVLTAQTDLYSAQQSLITARMQRLQNLVTLYQALGGGW 477 >gi|323528939|ref|YP_004231091.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385941|gb|ADX58031.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 486 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 116/446 (26%), Positives = 217/446 (48%), Gaps = 34/446 (7%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESF 56 +L F++ IV L AGC VGP+Y +P + + P +F ++ + D WW F Sbjct: 2 LLTRTFAMLIVAGLAAGCAVGPDYVRPEVAM-PARFEGQAAVDQRQAAATADLATWWAGF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT- 114 D L + V +AL+ NL + QA+ R+ A+ + + A L PS S + R +++T Sbjct: 61 GDPQLTRYVALALETNLDLAQASARVAQARAGLGAANAALLPSGNVSGQAARAYQSIETP 120 Query: 115 -----NST-----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 N+T L++ W++D+FG RR E++LA+ +++ A +L V Sbjct: 121 LGRLQNATPGFDRYGNDYEANLNASWELDVFGGLRRGREAALADYEASEAGAAATRLAVA 180 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ YI R + R+++A + + + + L + +G ++L + + E + +++ Sbjct: 181 AQTADIYISIRGLQARLNVARRQVQTQQDLLSTIKLLYGKGLAAELQVRQAEGALAQVKA 240 Query: 218 DIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +P LE ++ + +LG P T ++ P + G P +L+R RP Sbjct: 241 SVPVLETGLDAAMNALDVMLGAQPGTHRAELLEGGDIPAAPRIGA---TGSPGELLRRRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYL 332 D+ E++LA S A+IG+A ++ YP LSL+G I + N F + L Sbjct: 298 DLIVAERRLAASNARIGVAIAEYYPKLSLSGLIGSATSVASGNLFSSGANQAAGVLGLRW 357 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G+I + I A+ E ++ T L+A ++VENA +++ + ++ L V+ Sbjct: 358 RLFDFGRINAQIDEAKGQKAEMLAAYRLTALHATEDVENAFSALVKREEQAALLADGVDS 417 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE 418 ++ + S Y+ G SL+++L + Sbjct: 418 LSRARAASFAAYQHGVVSLIEVLQAD 443 >gi|224417824|ref|ZP_03655830.1| putative outer membrane channel protein [Helicobacter canadensis MIT 98-5491] gi|253827164|ref|ZP_04870049.1| putative TolC-like outer membrane protein channel [Helicobacter canadensis MIT 98-5491] gi|313141365|ref|ZP_07803558.1| cation efflux system protein cusC [Helicobacter canadensis MIT 98-5491] gi|253510570|gb|EES89229.1| putative TolC-like outer membrane protein channel [Helicobacter canadensis MIT 98-5491] gi|313130396|gb|EFR48013.1| cation efflux system protein cusC [Helicobacter canadensis MIT 98-5491] Length = 466 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 225/466 (48%), Gaps = 23/466 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MN + ++ +L+ GC++ P+Y +P L P F + SK I + WW+ F D Sbjct: 1 MNKIILVWIGLGLLIGGCSLSPKYEQPKANL-PKDFGVEYSKETI---SQTWWKDFGDEY 56 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN +V+ AL+ N + A ER++ A+ + R+D +PS S N K G+ Sbjct: 57 LNGIVEEALKNNYDLAVAMERVSQARSSWSYARSDRYPS--LSAQGEATRNKKNPRQGEF 114 Query: 121 DS----------DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D+ +++DL+G+ R + S+ A L ++ A D +L++I+ ++ SY Sbjct: 115 DNYNNFSLSGILSFELDLWGRARDADRSAYATLLASKANRDTIRLSLIASVVESYFGILT 174 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ I+ L +++ + +F G S++ + + +E+ S+ + + +L Sbjct: 175 LNNQVQISQNTLVSREESYQYRKKEFEAGKISEIDMQQARSEMASVRAQLQSLLMERNAA 234 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LLG P F + +S +P+ G+P+ L+ NRPDI E+ L + Sbjct: 235 QTALMILLGRDPQGIFNIALPVESQMLPKAPKVPV--GLPSTLLENRPDIEAAEQNLKAA 292 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG+A++ +P++SL G I + F ++ W++G + D G+ +N+ Sbjct: 293 NFSIGVARAAYFPTISLTGLIGYASPELNELFNNSSSTWNYGGNFVGNVIDFGRTSANVE 352 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +S +E + + +T+ A EV ++L + + + ++ L VE ++++ L+ + YR Sbjct: 353 LTKSQYREMLLNYGQTLRQAFGEVRDSLYNYSMSFERLSSLNEQVEALRRTLVLAELRYR 412 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G + L++L + E+ A + S +++Y A G G++ Sbjct: 413 EGYTNYLEVLTTQSNLFAAELTQQSANLENLSSVINIYKAFGGGWD 458 >gi|221211921|ref|ZP_03584899.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221168006|gb|EEE00475.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 572 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 117/474 (24%), Positives = 214/474 (45%), Gaps = 78/474 (16%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGN--------------SKNLINIDT-LKWWESFNDTSLN 62 CTVGP++T P + ++ S + D +WW +F D L+ Sbjct: 38 CTVGPDFTPPRANVPAGWHALQRADADSAASGVRAPASTPTTDADPDPRWWRAFGDPLLD 97 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------FIPN--- 111 +LV+ A + NL + A RI A+ + + A P AS S++ F+ + Sbjct: 98 RLVERAARDNLDVQAAVLRIAQARAQVRAAAAQGLPDVRASASYQREQLGLKGFVEDQGL 157 Query: 112 ------------------------LKTNSTGQLDS--------------DWKIDLFGQ-R 132 ++ + G LD+ W++DLFG+ R Sbjct: 158 DRQIDRLGAPGSPLDRLGAGTGAAVQQRARGALDALESPVNLWQAGFDASWELDLFGRVR 217 Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 R +E++ A +A A D A L++ +++ +Y+ R + + ++A +++ ++ +L+ Sbjct: 218 RAVEAADAQAGAAVASRDDALLSLEAEVAQTYLQLRGAQTQRALADELVGAQRELRDLTR 277 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 + G S L + +A + + + +P ++ + + ++ L+G ++ + Sbjct: 278 EQAAHGLASDLDVRSADARLAQLRAQLPQFDQQIVLLKNGLAYLVGGAPGALDDWLD--T 335 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL- 311 P + + +G+P+ L R RPDIR E L + A +G+A + YP +SL G + L Sbjct: 336 PRALPGVPPAVPVGLPSTLARRRPDIRRAEADLHAATADVGVAVAQFYPDVSLTGQVGLR 395 Query: 312 -THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 TH HWS FGP + LPIF G + SN+R ++ E + +++TVL A Sbjct: 396 ATHVREL----AHWSHLFYAFGPAVSLPIFSGGALVSNLRLTQARQAEAALAYRQTVLVA 451 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++V+NAL D+ L AV + ++ L+ YR+G LD+LD ER Sbjct: 452 LRDVDNALAVYRTDQTRAAALDDAVRAEQGALELARDRYRKGLSPFLDVLDAER 505 >gi|329954448|ref|ZP_08295539.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] gi|328527416|gb|EGF54413.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] Length = 459 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 119/456 (26%), Positives = 230/456 (50%), Gaps = 31/456 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 VL A C VG Y +P M L P S+ ++ I+I +W + D +L L+ AL+ N Sbjct: 15 VLFASCKVGKSYVRPEMAL-PD--SLAQQQDSISIADEQWQAVYTDHTLRSLIARALEYN 71 Query: 73 LTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS-------D 123 +L A R+ A + +SV A+L P I + R + N +S +S Sbjct: 72 KDMLIAAARVKEMAAQKRISV-ANLLPQLNGKIGAEREVENYGGHSRDVGNSYEAKALLS 130 Query: 124 WKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DL+G R + + L S AQ + ++ ++S++ +Y + + I Q Sbjct: 131 WELDLWGNLRWKKVAAVADYLQSVEAQRAL-RMTIVSEVAQAYYELVALDTELEIVRQTQ 189 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G Sbjct: 190 KAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERKISIKENDIAFLAG--- 246 Query: 242 TEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 EF +++ + F L +P + +G+P+DL+ RPDIR E++L A++ +A +++ Sbjct: 247 -EFPTRIER--SRFLQELDVPESLPVGLPSDLLERRPDIRAAEQQLIAEHARVKVAYTNM 303 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +P +SL G L D + +S + P+F+ GK ++ ++ ++S + + ++ Sbjct: 304 FPRISLTGQFGLESDVLSNFLQSPYSLLNGAVLTPLFNWGKNRAALKAQKASFEAEVHSY 363 Query: 359 QETVLNAIKEVENALTSINEDKKI---VTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++VLNA KE +NA+ N+ K++ KL+ + K + L+ + Y G + +D+L Sbjct: 364 EKSVLNAFKEAKNAIVDFNKIKEVYQLCLKLERSA---KTYVDLAQLQYINGVINYMDVL 420 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R ++ +S A R + V++Y A+G G+ Sbjct: 421 DAQRGYFDAQIGVSNAIRDELIAVVNVYKALGGGWQ 456 >gi|322831527|ref|YP_004211554.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321166728|gb|ADW72427.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 482 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%) Query: 20 VGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTI 75 VGP+Y +P + +PT F + G + + + K WW + D L+ L+ N + Sbjct: 41 VGPDYKRPDV-TMPTAFKEAKGWTAAIPKDNQAKGDWWAVYQDPELSSLLTQVQISNQNV 99 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---GQLDSDWKIDLFGQ- 131 Q + A+ + R+DL+PS A++ + S QL + W++DL+G+ Sbjct: 100 AQYAAQYREAQALVTQARSDLYPSVDATVGSTRSGTSTSTSNSQSAQLSASWELDLWGKL 159 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 RR E A+ ++ A + A L+ S+L Y R ++I++ Q +D Y++ + + Sbjct: 160 RRTAEEQDASAQASKADLADATLSAQSELAQDYFQLRVMDQQIALYKQSIDSYQRYLTVI 219 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 ++ G TS+ +L + + +++S ++ L+ H I+ L+G P +F Sbjct: 220 QNQYEGGNTSRATLAQAQTQLESTKASALDLQWQRAQLEHAIAVLIGKPPAQF----SLA 275 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + + + NL + IP+ L++ RPDI E+ +A + A +G+A + YP L+L+ S Sbjct: 276 ARDVKLNL-PAMPDAIPSQLLQRRPDIAAAERTMASANAAVGVATAAYYPDLTLSASGGF 334 Query: 312 THD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 N F N WS GP+L + D G + + +AE++ +++++VL A++E Sbjct: 335 ASSAFHNLFSLPNRVWSLGPELSQTVLDFGSTRGKVAQAEAAYDADVASYRQSVLTAMQE 394 Query: 369 VENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKVEV 426 VE+ L ++ D ++V + Q+A + K+S ++ Y+ G LD+ E + + + Sbjct: 395 VEDYLVELHTLDSELVAR-QNAADSAKESARVTYNQYQAGMIDYLDVATTENTSLTQQQS 453 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 LS+ Q+ S V L A+G G+N Sbjct: 454 VLSLLSTQMVTS-VKLIAALGGGWN 477 >gi|296161645|ref|ZP_06844449.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295888122|gb|EFG67936.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 470 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 120/454 (26%), Positives = 219/454 (48%), Gaps = 29/454 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDT------LKWWESFNDTSLNKLVKIALQ 70 ++ P Y +P +P+ P +S G+S + ++ D + W F D L L++ AL Sbjct: 1 MSLAPHYVRPALPV-PDTWSTGSSADGTLSADATSAASQIDWRSYFPDAQLQALIEQALT 59 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH-RF------IPNLKTNS----TGQ 119 N + A +R+ A+ RAD P+ A S+ RF +P + G Sbjct: 60 GNRELRIAVQRVEEARATYGIRRADTLPTISAGGSYVRFRAPGVLLPGGSIDGEAYQVGL 119 Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +S+W++D +G+ R++ +++L ++ A A ++VI+ + +Y+ R ERI++A Sbjct: 120 TESNWELDFWGRVRNLKDAALEEFLASDAARRAATISVIANVADNYLLLRELDERIAVAR 179 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + +++ + +F GA SKL L + E ++ ++ + LE+S H ++ L+G Sbjct: 180 ETIASRSESLRIFRRRFEVGAISKLDLRQSEILLQQAQTLVAQLEQSRAAQAHALAVLVG 239 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A + S P+L+ G+P+ L+ RPDI E +L + A IG A++ Sbjct: 240 AAAPLLPAPLNDAS--VGPDLHA----GLPSSLLERRPDIVAAEHRLRAANANIGAARAA 293 Query: 299 LYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P ++L G+I T + F + W F P + LPIFD G+ +SN+ A++ E Sbjct: 294 FFPRVTLTGAIGSTSTDLQHLFASGSGAWIFTPNVSLPIFDAGRNRSNLELAKAREGEAV 353 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ET+ +A ++V +AL++ V + + L+ + Y G L++L Sbjct: 354 AQYEETIQDAFRDVADALSAREWLAAQVQAETDTLVAQSERARLARLRYDNGATPFLEVL 413 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D +R L +R L S V LY A+G G Sbjct: 414 DAQRDLLNARQQLIQTRRALLTSRVALYAALGGG 447 >gi|332283401|ref|YP_004415312.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7] gi|330427354|gb|AEC18688.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7] Length = 489 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 126/476 (26%), Positives = 225/476 (47%), Gaps = 47/476 (9%) Query: 13 VLLAGCTVGPEYTKPHM------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +LLAGC VGP+Y +P + P Q+ + + + +WW FND Sbjct: 16 LLLAGCAVGPDYQRPDVDVPNAFKEASLSPEAAKQWKMAQPADALARG--RWWAIFNDPI 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPN 111 L+ L A+ N + A R+ A+ + A L PS A S + + +P Sbjct: 74 LDGLEDQAMSANQDLKVAAARVKQARALRQNAEAGLLPSLDAGFGPTRQRQSSAAQGLPE 133 Query: 112 LKTNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +S Q ++ DLFG+ ++++ A+ + + A +L + + + +Y Sbjct: 134 DTGSSAQTLWRAQAGISYEADLFGRIASDVDAATADAEQSAALFQSVRLALQADVAQAYF 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + + +DL K +EL ++ +G S+L L + ++ + S S +++ Sbjct: 194 RIRRLDAEQDLYRRTVDLRGKTLELVQQRYDEGEISELDLARAKSALSSASSQALGIKRE 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + H ++TLLG +F + + + I G+P+ L+ RPDI E+ + Sbjct: 254 RAVAEHALATLLGKTPAQFALAPEPLGR-----VSVDIPAGLPSSLLERRPDIAAAERAM 308 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFD 336 A + A++G+AK+ +P L+L G A +++S G WS G L LPIFD Sbjct: 309 AAANARVGVAKAAFFPRLTLTG--AFGYESSELGNLLEWSSRTFLLGPLVGTMLTLPIFD 366 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ ++ + RA + +E +++TVL+A +EVE+ L+S+ K AV+ ++ Sbjct: 367 GGRREAGLERARALYEEDVAAYRQTVLSAFREVEDGLSSLRILKDQTQVQDAAVQQASRA 426 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA-KRQLAKSYVDLYIAIGSGYN 451 LS I YR+G S LD++D +R V+ S+A + A++ V L AIG G++ Sbjct: 427 AELSQIQYREGSVSYLDVIDADRQVL-VQQRASLALDGERAQTAVALIRAIGGGWD 481 >gi|149189714|ref|ZP_01867996.1| putative outer membrane protein [Vibrio shilonii AK1] gi|148836526|gb|EDL53481.1| putative outer membrane protein [Vibrio shilonii AK1] Length = 501 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 124/475 (26%), Positives = 227/475 (47%), Gaps = 43/475 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + LAGC VGP+YT+P M L T + G++K D WW SFND SLN++V+ +QN Sbjct: 23 ITLAGCAVGPDYTEPTMTLSNT-YLYGSNKQQAEND--YWWTSFNDDSLNQMVQDVQRQN 79 Query: 73 LTILQATERINAAKE-------------NI-------------------LSVRADLFPSS 100 + + A ERI A NI L+ D P+ Sbjct: 80 IPLKMAAERIKMANSYQSVVSSFKVPTVNIGAGYFNYQLSKNDSLLGPALNPIGDSLPTG 139 Query: 101 YASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VIS 158 S + N + W++DLFG R +S+ A + A++ + LN + + Sbjct: 140 TPLDSTTLLNNQHDGVFAGANIGWEMDLFG-RIDRQSNAAKIRVEQAEIYRSGLNTLITA 198 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ +Y+ R +ER+++ L K +EL G S+L L + + + + ES Sbjct: 199 DLVHNYLQYRGAQERMALIDANLADQTKTLELVKKLVKSGYGSELDLAQAQTMLAATESV 258 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 IP LE + +++ ++TLLG P T+ ++ S+ P+L I +G+P+DL++ RPDI Sbjct: 259 IPQLEIAQQVHKQRMATLLGEPLTQV--DIRLASSAGLPSLEGVIPVGLPSDLLKRRPDI 316 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + ++ YP L G+ ++ D+ F + W+ + +F Sbjct: 317 RIAEREMAALNEEVAASIANRYPKFFLTGTPGVSASSFDDLFDSDSVGWAGAVGVSWNVF 376 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ + E+ + ++ +V AI EV++ L + ++ ++Q A+ Sbjct: 377 DGGRGEALVELNEARFDAAVLGYEHSVNTAITEVDSMLFAYGRSQQNEQRIQEALNASDN 436 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S + Y+ G + L +LD +R +E L A+ Q A+ V ++ ++G + Sbjct: 437 ALSKAQSLYKAGLTNHLALLDAQRQQRIMEDRLLAARLQTAQVTVGVFKSLGGDW 491 >gi|312879380|ref|ZP_07739180.1| RND efflux system, outer membrane lipoprotein, NodT family [Aminomonas paucivorans DSM 12260] gi|310782671|gb|EFQ23069.1| RND efflux system, outer membrane lipoprotein, NodT family [Aminomonas paucivorans DSM 12260] Length = 477 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 17/446 (3%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 +GP TKP + +P +S S +LI T WW F + L++ V+ A + N + QA Sbjct: 20 MGPAMTKP-VTDVPVSWSGPVSGDLITPRT-AWWTLFREPVLDRCVEEAFRNNRNLEQAL 77 Query: 80 ERINAAKENILSVRADLFPS---SYASISHRFI--PNLKTNSTGQLDS----DWKIDLFG 130 R+ A+ + R+ P + R I N +N T D ++ DL+ Sbjct: 78 ARVEQARAVLGETRSQQSPEVNLQVEAARARVIEGANGSSNPTNTNDVLGAVSYEADLWS 137 Query: 131 Q-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 + R+ ++ L S+ A D +L++ ++ +Y R +++ IA + L K+ + Sbjct: 138 KLRKATTAAKLQLLSSEAARDTVRLSLAGQVAKAYFSLRGQDQQLQIAQETLQTRKEALA 197 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L L + +G TS+L + ++E + +E + + H + L+G E + Sbjct: 198 LRKLLYEKGRTSELDYRQDQSETAVAAVKVRQMENAVARSEHALLVLMGRNPQEQVANQV 257 Query: 250 KQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG- 307 + + P I G+P+ L+ RPDIR E+ ++AKIG AK+ +P+LSL G Sbjct: 258 TRGVSLDALPQPPEIPPGLPSQLLERRPDIRQSEQDYLAALAKIGEAKAAQFPTLSLTGL 317 Query: 308 --SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 S + ++ F G T W KL P+ D GK KS +++AE++A+E + +TV A Sbjct: 318 FGSASPELEDLFTG-PTAWELAGKLLAPLVDGGKRKSRVKKAEAAARESLGIYDQTVRTA 376 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 +E +AL + ++I+T + ++ L+ Y G S LD+LD +R +V+ Sbjct: 377 FQETLDALVGNTKAQEILTLQTEQEKAQSRAYELAKAKYEGGYASHLDLLDAQRQLFQVQ 436 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYN 451 +DL ++ + VDL +A+G G++ Sbjct: 437 LDLEGSRTDRLNAVVDLCLALGGGWD 462 >gi|297622034|ref|YP_003710171.1| putative outer membrane efflux protein [Waddlia chondrophila WSU 86-1044] gi|297377335|gb|ADI39165.1| putative outer membrane efflux protein [Waddlia chondrophila WSU 86-1044] Length = 478 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 121/466 (25%), Positives = 232/466 (49%), Gaps = 40/466 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + ++ +AGCT+GP YT P++ P + S+ + + IN D WW F+D L +L+ Sbjct: 8 VLLLSMAGCTLGPHYTPPYVDNPEY-WRVSLEDVRGSINAD---WWYQFDDDVLVQLIGN 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR----------FIPNLKT-NS 116 +L+ N ++ A R+ R++L+P S + +P +K N Sbjct: 64 SLEGNQDLIAAKYRVEEFLGLYRVTRSNLYPQIGGSAEYSRQKLSLGPAPLLPGMKNPND 123 Query: 117 TGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 QL + W+ID++G+ RR E++ +L +A + ++S + +YI+ + Sbjct: 124 LYQLMLNGSWEIDVWGKLRRATEAACRDLLAAEENRLVVVQTLVSSVALAYINLLRLDRQ 183 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + IA + K +EL +F G S++ L ++E++ + + IP E+ + I Sbjct: 184 LEIAIETAKSRGKTLELFQKRFAAGVISEIDLSQIESQYREALATIPDFEQRIERQENAI 243 Query: 234 STLLGY-----PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 S LLG P + LH L +P I IP+ L+ RPD+R E++LA Sbjct: 244 SVLLGRNPGPIPRGKTLH-----------TLTLPEIPSEIPSHLLLQRPDLRAAEQELAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A+I +A++ +PS+SL G+ + + + F + W++G + +PIF G+I + Sbjct: 293 ATARIAVARAAYFPSISLTGAYGTSSNELSSLFTAGTSLWNYGVPITMPIFTAGRISGEV 352 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + AE+ + T+++ +L A ++V ++L + ++ + + VE + L+ + Y Sbjct: 353 KAAEAFRNQLLATYRQRILEAFQDVNDSLIVFQKRREQEEEQRKQVESLQVYARLARLRY 412 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G S L++LD ER+ V+++ S L ++ V LY ++G G+ Sbjct: 413 DEGYASYLEVLDAERSLFNVQLEYSEVYANLFQALVALYRSLGGGW 458 >gi|53719634|ref|YP_108620.1| putative drug-resistance related outer-membrane protein [Burkholderia pseudomallei K96243] gi|52210048|emb|CAH36021.1| putative drug-resistance related outer-membrane protein [Burkholderia pseudomallei K96243] Length = 526 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 63/458 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 45 RWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQREQ 104 Query: 107 ---------------------------RFIPN----LKTNSTGQLD-------------- 121 R P L+ + LD Sbjct: 105 LGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAGFD 164 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A + Sbjct: 165 ASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAVAL 224 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 225 ADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG-D 283 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Y Sbjct: 284 APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQFY 342 Query: 301 PSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P +SL G + TH HWS FGP + LPIF+ G + +N+R +++ + Sbjct: 343 PDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQAQ 398 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S +D Sbjct: 399 AALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSFID 458 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER ++ QL V LY A+G G+ Sbjct: 459 VLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 496 >gi|317049347|ref|YP_004116995.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316950964|gb|ADU70439.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 468 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 123/461 (26%), Positives = 226/461 (49%), Gaps = 27/461 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK--WWESFNDTSLNKLV 65 + +LLAGCTVGP+Y +P M + PT F + G ++ D K WW ++D +L+ L+ Sbjct: 11 VMALLLAGCTVGPDYQRPTMAM-PTHFKEAKGWTQATPQDDKSKGEWWSVYHDATLDSLL 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ----- 119 + N + + A+ RA+LFPS SY + S R + ++TGQ Sbjct: 70 RQVSISNQNVANYAAQYREAQALAGQSRAELFPSVSYDASSTR--SGSRASTTGQRSVSN 127 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L + W++DL+G+ RR +E + A+ ++ A++ L+ S+L Y R E+ Sbjct: 128 SHQAELSASWELDLWGKLRRTLEENKASAQASAAELANITLSAQSELAQDYFQLRIMDEK 187 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I++ + +D Y++ + + K+ G+ S+ +L + + +++S + + H I Sbjct: 188 IALYQRSVDAYQRYLTVIQNKYQAGSESRATLAQAQMQLESARASAQDYQWQRAQLEHAI 247 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G +F + K P+ IP ++ P+ L++ RPDI Y E+ +A + A +G Sbjct: 248 ALLMGRAPADFSLPVAKLEATL-PD--IPNSV--PSQLLQRRPDIAYAERNVAAANAAVG 302 Query: 294 IAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A + YP L+L+ S + T N F N WS GP+L + D G + + +A +S Sbjct: 303 VAIAGYYPDLTLSASGGVSSSTFSNLFSLPNRVWSLGPELSGTLLDFGATSAKVEQARAS 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++++ VL ++EVE+ L +N K + LQ + ++S ++ Y G Sbjct: 363 YDASVASYRQAVLEGMQEVEDYLVELNTLKGELVSLQLSTAAAQESARVTRNQYEAGMID 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+ E + + L + + V+L A+G G+ Sbjct: 423 YLDVATTENTSLSEQQSLLTTQSTQWVTSVELIAALGGGWQ 463 >gi|217423633|ref|ZP_03455134.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|217393491|gb|EEC33512.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 563 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 127/519 (24%), Positives = 227/519 (43%), Gaps = 93/519 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 21 CTVGPDFHPPRADV-PAQWHDVTATSTSSASSAASPPAARSGAPNAGAPPRSLPTVEADP 79 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 80 DPRWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQR 139 Query: 107 -----------------------------RFIPN----LKTNSTGQLD------------ 121 R P L+ + LD Sbjct: 140 EQLGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 199 Query: 122 --SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 200 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAV 259 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 260 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 319 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 320 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 377 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 378 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 433 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 434 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 493 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 494 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 532 >gi|146282521|ref|YP_001172674.1| outer membrane protein OprN precursor [Pseudomonas stutzeri A1501] gi|145570726|gb|ABP79832.1| outer membrane protein OprN precursor [Pseudomonas stutzeri A1501] Length = 462 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 221/462 (47%), Gaps = 24/462 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPH---MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 SL + + GC VGP+Y P LL + + + WW+ F D +L+ L Sbjct: 6 LSLLALTITGCAVGPDYRAPQPEPARLLQAERGVHDRSRF----EAAWWQQFEDPTLDAL 61 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQ- 119 V AL +N + A R+ AA+ V D P+ + A I P Sbjct: 62 VGEALAENRELRIAYARLRAARAIRDDVGNDRLPTVTAGARADIGKAQQPGFSEERVNAE 121 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 LD W++DLFG+ +R +E+S A ++A A++ ++++I++L+ +Y R + R Sbjct: 122 RYDLGLDMAWELDLFGRIQRSLEASEAQAEAAEAELYQLQVSLIAELVDAYGQLRGAQLR 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA L + + EL+ G S+L +++ +A + + E+ +P L+ + I Sbjct: 182 ERIARDNLANQRNSHELTEQLREAGVGSELDVLRADARLAATEASLPQLQAQQTRARNRI 241 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG A + + S P + + IG P +L+R RPDIR E++LA + A +G Sbjct: 242 ATLLGQRADQLSVDL---SPRELPAIAKALPIGDPGELLRRRPDIRAAERQLAAATANVG 298 Query: 294 IAKSDLYPSLSLNGSIA-LTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DL+P ++L+G + + S G + W P + FD G +++ +R AE+ Sbjct: 299 VATADLFPRVNLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLGSVRARLRGAEAD 358 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A +++ VL A++E ENA + + + L + + + I YR+G Sbjct: 359 ADAALAGYEQQVLLALEESENAFSDYARAQDRLLSLLRQSTASRAAAQQAEIRYREGTAD 418 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 419 FLVLLDAERERLLAEDAQAQAEVELYRGVVAIYKALGGGWRP 460 >gi|294625615|ref|ZP_06704239.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665814|ref|ZP_06731084.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600090|gb|EFF44203.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604421|gb|EFF47802.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 486 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 222/465 (47%), Gaps = 39/465 (8%) Query: 16 AGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKWWESFNDTSLNKLVKIA 68 A TVGP Y P P F GN++ +WW + D L+ L++ A Sbjct: 20 ACSTVGPNYAVPAESAYRRPAANAAFLDTGNAQVQPGAALPARWWALYQDPMLDGLIEQA 79 Query: 69 LQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASISHRFIP--N 111 L+ N+ + A R A E + RA + S+ A + +P N Sbjct: 80 LRDNIELKVAGANLRRAAAVYEQAMDAGGFDYDVEAGVSRAQV--SAEAFLQEEKLPVFN 137 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L + G+ ++ DLFG+ +R E++ A+ A A +D+A+++V +++ SY++ H Sbjct: 138 L---ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARVSVAAQVAGSYVEICHA 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +A L L + + +++ G + L + A++ +E+ +P L + Sbjct: 195 NHELQVAEHSLQLQQHSRQITQRLIAAGRGTPPDLARATAQVAMLEASLPPLRARRQAAA 254 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LLG E + S P + PI IG L+ RPD+R E++LA + A Sbjct: 255 YQLAALLGKTPGEVPAGVD--SCAHAPAVQQPIPIGDGRALLARRPDVRQAERRLAAATA 312 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A ++LYP + L GSI T D P TH WSFGP + + G ++ +R Sbjct: 313 RIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSFGPLISWTLPSSGA-RARVRA 369 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ A + TVL A++EV+ +L+ +D + L+ A + + + + + Y+ Sbjct: 370 TEAGADAALAQFDNTVLQALREVQTSLSRYAQDLDRLHLLEQAQQQAELASAQNRRLYQG 429 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 GR L LD ER A ++ L+ A+ Q+++ + L++A+G G++ Sbjct: 430 GRTPYLSSLDAERTLATADMTLATAQAQVSQDQIQLFLALGGGWD 474 >gi|187927064|ref|YP_001893409.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|241665393|ref|YP_002983752.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] gi|187728818|gb|ACD29982.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|240867420|gb|ACS65080.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 484 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 119/477 (24%), Positives = 219/477 (45%), Gaps = 44/477 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM----------PLLPTQFSIGNSKNLINIDTLKWWES 55 A+ + IV LAGC++ P Y +P + P Q + K WW+ Sbjct: 11 ALAASLIVSLAGCSLAPTYERPALDVPAHWQTEAPWRAAQPADAAPKG-------PWWQR 63 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYA 102 FND L+KL+ AL N ++ A + A+ RA L P SS Sbjct: 64 FNDPQLDKLITQALAHNQSLKVALSNLEQAQAQTRVARASLLPTITANNNDSRTRTSSER 123 Query: 103 SISHRFIPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 +S P + T + + D+ ++ DLFG+ R+ + ++ A+ + A A + +L + + Sbjct: 124 PLSSYTSPTMSTIQSDLVLRADASYEADLFGRVRNTVANAAASEEQAGANFENFRLLLAA 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ ++ + R I++ + L L +K ++ + G S L L + +A + S + Sbjct: 184 QVATTWYNLRETDAEIAVVQEGLALQRKALDFVTSRHQDGVASGLDLAQQQALVDSTATQ 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 L K H ++TL+G PA F H P I + +P+D+I RPD+ Sbjct: 244 AELLTKQRAQYEHALATLVGTPAPAF-HIDPTPLKGTAPQ----IPVALPSDVIERRPDV 298 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 E+ A + A++G+A++ +PS+ LNG + F WSFG ++ +F Sbjct: 299 AAAERGAAAANAQVGVARAAFFPSVMLNGGAGWESRDLALLFSAPTLLWSFGTQIAQTVF 358 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + + A ++ Q +++TVL A++EVE+ L + + + +HAVE +K Sbjct: 359 DAGRTRGRVDIANAAYQGAIANYRQTVLGALQEVEDGLAGLQSLDRAANQARHAVESARK 418 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y G + LD++ +++ + + I +Q+ S V L A+G +N Sbjct: 419 VYDIASVRYEGGLATSLDVITAQQSLLNNQRTAVQILGQQMTTS-VFLVKAVGGDWN 474 >gi|315123337|ref|YP_004065343.1| putative outer membrane protein oprM precursor of a metabolite export system [Pseudoalteromonas sp. SM9913] gi|315017097|gb|ADT70434.1| putative outer membrane protein oprM precursor of a metabolite export system [Pseudoalteromonas sp. SM9913] Length = 469 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 236/472 (50%), Gaps = 38/472 (8%) Query: 4 LRAI-FSLF-IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 LRAI FS F + +L+GC + P+ ++P+ P ++ + +L+W + FND L Sbjct: 3 LRAISFSAFTLAILSGCQLAPQQEALNLPV-PDAYASETGDE--QVSSLQWQQFFNDEKL 59 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR-------ADLFPS--SYASISHRFIP-N 111 L+ +L+ N + + A N+ VR + L+PS AS S + +P + Sbjct: 60 KTLISQSLEHN-------KDLQIAALNVQRVRGLYQIEDSALYPSLDFNASGSRQRLPSD 112 Query: 112 LKTNSTGQLDSDW---------KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L + Q+ S + ++DL+G+ R E +L L S ++++I++L Sbjct: 113 LSASGQPQISSQYSATVGMTAYELDLWGKVRNQSEQALQTLYSTQLSQYTMQVSLITELA 172 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 ++++ ++ +++A + L + ++ L+ GA SK++L +L++ + + + DI Sbjct: 173 NAWLNYATDQQLLALAQETLSSQQASLSLTQKSVDLGAASKITLEQLKSTVATAKVDIAK 232 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ + + + + L+G E L + +S N+ +L + +G+P+DL+ RPDI+ Sbjct: 233 YQRLVKRDKNALDLLVGKTVGEDL--LPSKSLNYLLDL-PSVPVGLPSDLLTQRPDIKAA 289 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E +L + A IGIA++ YPS+SL G+ + N F + WSF P + LPIF+ G Sbjct: 290 EHQLLAANANIGIARAAFYPSISLTANAGTASRDLSNLFDAGSGTWSFMPSVNLPIFNMG 349 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++N+ A + Q T+Q+ + A +EV + L + L+ ++ K + Sbjct: 350 RNQANLDVANAEQQVAVATYQQKIQQAFREVADVLADREGYNAQLMALEELLQSRKTTFE 409 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS Y +G S L +LD +R L ++ + S ++LY A+G G+ Sbjct: 410 LSQARYDKGVDSFLQVLDAQRTWYSARQQLITGQQAVLASQINLYKAVGGGW 461 >gi|327480778|gb|AEA84088.1| outer membrane protein OprN precursor [Pseudomonas stutzeri DSM 4166] Length = 462 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/460 (28%), Positives = 220/460 (47%), Gaps = 20/460 (4%) Query: 8 FSLFIVLLAGCTVGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 SL + + GC VGP+Y P P Q G+ + WW F D +L+ LV Sbjct: 6 LSLLALTITGCAVGPDYRAPQPEPARLLQAERGDHDR--SRFEAAWWRQFEDPTLDALVG 63 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQ--- 119 AL +N + A R+ AA+ V D P+ + A I P Sbjct: 64 EALAENRELRIAYARLRAARAIRDDVGNDRLPTVTAGARADIGKAQQPGFSEERVNAERY 123 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD W++DLFG+ +R +E+S A ++A A++ ++++I++L+ +Y R + R Sbjct: 124 DLGLDMAWELDLFGRIQRSLEASEAQAEAAEAELYQLQVSLIAELVDAYGQLRGAQLRER 183 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA L + + EL+ G S+L +++ +A + + E+ +P L+ + I+T Sbjct: 184 IARDNLANQRNSHELTEQLREAGVGSELDVLRADARLAATEASLPQLQAQQTRARNRIAT 243 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG A + + S P + + IG P +L+R RPDIR E++LA + A +G+A Sbjct: 244 LLGQRADQLSVDL---SPRELPAIAKALPIGDPGELLRRRPDIRAAERQLAAATANVGVA 300 Query: 296 KSDLYPSLSLNGSIA-LTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +DL+P +SL+G + + S G + W P + FD G +++ +R AE+ A Sbjct: 301 TADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLGSVRARLRGAEADAD 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++ VL A++E ENA + + + L + + + I YR+G L Sbjct: 361 AALAGYEQQVLLALEESENAFSDYARAQDRLLSLLRQSTASRAAAQQAEIRYREGTADFL 420 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 421 VLLDAERERLLAEDAQAQAEVELYRGVVAIYKALGGGWRP 460 >gi|330823035|ref|YP_004386338.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329308407|gb|AEB82822.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 481 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 117/456 (25%), Positives = 220/456 (48%), Gaps = 21/456 (4%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSI-GN-----SKNLINIDTLKWWESFN 57 RA+ L I LLAGC+ P+Y +P P+ P F++ GN ++ +ID W + F Sbjct: 13 RALSPLVIAALLAGCSFIPKYERPAAPV-PEAFALAGNDVPATARAAADID---WKDYFT 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS- 116 D L +L+ IAL N + A + A+ RA FP+ A S P++ Sbjct: 69 DPRLQRLIGIALGNNRDLRVAMLNVEQARAQFQIQRAGQFPTVNAIASGTRQPSIVNGQY 128 Query: 117 -----TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G S W+ID FG+ + E +LA + A++++++ + ++ Sbjct: 129 ANQFQAGLGISAWEIDFFGRIGALKEQALAQFLATEEARKSAQISLVAAVASGWLTLMAD 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + I+ + L+ +++++L+ L+ G +S+L + E+ ++ + ++ ++ Sbjct: 189 EELLDISRRTLETREESVKLTRLRLEHGVSSELDSHQAESLAQAARATYAQQQRQRLLDE 248 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LLG P + + L P+ G+P+DL++ RPDIR E+ L + A Sbjct: 249 NALALLLGQPLPDDIRASLPSMRLADAALMQPLPAGLPSDLLQRRPDIRQAEQLLIGANA 308 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL GS++ F + +S P+L LPIFD G+ ++ + A Sbjct: 309 NIGAARAAFFPRISLTAQFGSVSDELSGLFKSGSWAFSLAPQLALPIFDAGRNQAGLESA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++++ A +EV +AL ++ + + + K + LS + YR G Sbjct: 369 RAGREIAVAQYEKSIQTAFREVSDALAGQATLQQQIDAQRAQTQADAKRLDLSDLRYRNG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 S LD+LD +R+ E L + Q ++ V LY Sbjct: 429 VASYLDLLDAQRSLYATEQALVQTRLQQLQNQVTLY 464 >gi|226192939|ref|ZP_03788551.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|225935029|gb|EEH31004.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] Length = 572 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 63/458 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 91 RWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQREQ 150 Query: 107 ---------------------------RFIPN----LKTNSTGQLD-------------- 121 R P L+ + LD Sbjct: 151 LGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAGFD 210 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A + Sbjct: 211 ASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAVAL 270 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 271 ADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLGD- 329 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Y Sbjct: 330 APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQFY 388 Query: 301 PSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P +SL G + TH HWS FGP + LPIF+ G + +N+R +++ + Sbjct: 389 PDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQAQ 444 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S +D Sbjct: 445 AALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSFID 504 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER ++ QL V LY A+G G+ Sbjct: 505 VLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 542 >gi|134095881|ref|YP_001100956.1| outer membrane transport protein involved in copper (silver) tolerance [Herminiimonas arsenicoxydans] gi|133739784|emb|CAL62835.1| Outer membrane protein oprM [Herminiimonas arsenicoxydans] Length = 474 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 119/453 (26%), Positives = 220/453 (48%), Gaps = 21/453 (4%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+ C++ P+YT+P P+ + + + W F D L L+ AL N Sbjct: 14 VLSACSMAPKYTRPDAPVAADYPAASAAADKQQRAHETGWRNFFPDQRLQALIGAALANN 73 Query: 73 LTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTN-STGQL 120 + A RI A+ ADL P+ + ASIS I ++ + G Sbjct: 74 RDLRVAALRIEEARAQYNIQSADLLPNLNGTFTGSRARTPASISPTGIDSVSSAYQVGLS 133 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +++D FG+ + +++LA+ + A +++++++ +Y+ R F E++++A Sbjct: 134 LASFELDFFGRVHSLNDAALASYLATEEAQRAAHISLVAEVAKAYLAERAFAEQLALAQS 193 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L +L+ +F GA+S L L + EA ++S TL + ++ ++ L+G Sbjct: 194 TLKSRGTAYDLAKQRFEVGASSALDLRQNEALLQSARVAQVTLARQRAQALNALTLLVGQ 253 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P T F + Q + Q N+ I G+P+DL+ RPDIR E+ L + A IG A++ Sbjct: 254 PLTGF---PEAQPLSAQ-NIVTDIPAGLPSDLLTQRPDIRSAEQSLLAANANIGAARAAF 309 Query: 300 YPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P +SL G+ + T N F W+F P+L LPIFD G+ +N+ +E Sbjct: 310 FPRISLTAGIGTASSTLSNLFDSGTRAWTFAPQLVLPIFDAGRNSANLTLSEVRKNIAIA 369 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +A +EV +AL + + ++ + + E + + L+ ++ G S LD+LD Sbjct: 370 NYEKSIQSAFREVSDALVARDLLEEQIDAQRRVQEAQAERLKLADQRFQNGIASSLDVLD 429 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R E DL A+ + +DLY ++G G Sbjct: 430 AQRELFSAEQDLVQARLLRLTNAIDLYRSLGGG 462 >gi|171317846|ref|ZP_02907024.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171096966|gb|EDT41835.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 490 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 224/472 (47%), Gaps = 34/472 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +L + + GC VGP+Y P L+ S S++ ++D +WW +F+D L ++ Sbjct: 16 ALLGLAVTGCAVGPDYVAPKPGLVAFHNTAAASKSQSRSEPSLD--QWWRAFDDPMLVEV 73 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRF-----------I 109 V+ AL QNL + + R+ A+ A+L P+ A+ H+ + Sbjct: 74 VQRALAQNLDLAASLARVQQARAAAAGAGANLLPTVDFGGSATTEHQSTRSPIGKLASSL 133 Query: 110 PNLKTNS---TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 P S T + W+IDLFG RR ++ +A A +++V + +Y+ Sbjct: 134 PGYSRTSHEYTLGPSASWEIDLFGGLRRDATAAREEAQAAEADQAGVRISVAADAADAYL 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++ R+ + ++ + ++L ++ G+ + + + +A +K + +P L Sbjct: 194 QIRGYQARLGVVEDQIETDSRLLQLVRDRYNAGSATGREVAQADALLKQALTTVPPLRIG 253 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEK 283 ++ + L+G P T Y + PI + P D++R RPDI E+ Sbjct: 254 LEKQLNRLDVLMGVQPGT----YASELGTPHDVPAVPPIPSDSSPTDMLRRRPDIIAAER 309 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +LA S IG A SD YP +SL+G++ L ++ F G L +FD GK+ Sbjct: 310 RLAASNEHIGAAISDYYPKISLSGALGLDSVGTNHMFSASAFQAVGGGALRWRLFDFGKV 369 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +++A + E ++++VL+A ++VENAL ++++ + V ++Q +E K+ LS Sbjct: 370 DAEVKQANGANAEALAIYRQSVLHAAEDVENALVTLSQTQIRVAEIQDQIEALTKARDLS 429 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR G +L D+LD + + +L + A++ V +Y A+G G+ P Sbjct: 430 QQAYRAGSITLTDVLDADSQLLSAKDELDSNRADAARAAVGVYRALGGGWEP 481 >gi|76810724|ref|YP_333199.1| hypothetical protein BURPS1710b_1798 [Burkholderia pseudomallei 1710b] gi|126451768|ref|YP_001065912.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|242316190|ref|ZP_04815206.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254188509|ref|ZP_04895020.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|254257952|ref|ZP_04949006.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76580177|gb|ABA49652.1| TrpC [Burkholderia pseudomallei 1710b] gi|126225410|gb|ABN88950.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|157936188|gb|EDO91858.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|242139429|gb|EES25831.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254216641|gb|EET06025.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 569 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 63/458 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 88 RWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQREQ 147 Query: 107 ---------------------------RFIPN----LKTNSTGQLD-------------- 121 R P L+ + LD Sbjct: 148 LGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAGFD 207 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A + Sbjct: 208 ASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAVAL 267 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 268 ADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLGD- 326 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Y Sbjct: 327 APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQFY 385 Query: 301 PSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P +SL G + TH HWS FGP + LPIF+ G + +N+R +++ + Sbjct: 386 PDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQAQ 441 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S +D Sbjct: 442 AALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSFID 501 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER ++ QL V LY A+G G+ Sbjct: 502 VLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 539 >gi|330992510|ref|ZP_08316458.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329760709|gb|EGG77205.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 512 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 119/504 (23%), Positives = 220/504 (43%), Gaps = 62/504 (12%) Query: 2 NILRAIFS--LFIVLLAGCTVGPEYTKPHM----PLLPTQFSIGNSKNLINIDTLKWWES 55 N +R +F+ L + LAGCTVGP Y KP + TQ ++ + D +WW+ Sbjct: 5 NAVRRLFAGGLSALALAGCTVGPTYHKPQVSAPAAWRETQPPAESTPGTASADP-QWWKL 63 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------------- 98 FND L +L NL + A+ R+ ++ A FP Sbjct: 64 FNDPLLTRLENEVAASNLDLKAASLRLMQSQAERRIASAAQFPHAEANASYGRERASTNG 123 Query: 99 -------------SSYASISHRFIPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHI 135 S AS + F P S G +++ W++DL+G RR + Sbjct: 124 VLGLLGTMEREGTGSIASGTQGFGPTALPGSVGNPSFNLPQYGMNASWEVDLWGHVRRQV 183 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 E++ A + + ++++++ YID R + +I I + + ++ L+ L+ Sbjct: 184 EAATAAMHATEEMRRDILVSLMAETAQDYIDLRATQTQIGILEHNIAIATNSVRLTTLRL 243 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 QGA ++L + + ++ + + + L+ ++ +S L+ Sbjct: 244 QQGAATRLDVAEATGQLHTFTARLAPLKAQATHLLNALSFLVAREPGAL-------DAGL 296 Query: 256 QPNLYIP-----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 P IP I +G+P++L RPDIR +L + A IG+A +D +P ++L+GS+ Sbjct: 297 GPVAPIPVVPATIPVGLPSELAERRPDIRMAADRLHAATASIGVAIADFFPRITLSGSLD 356 Query: 310 --ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 AL + + FGP LPIF+ G++ + + +E +Q TVL A + Sbjct: 357 VQALQFSGLGSWASRQYGFGPTATLPIFEGGRLTGQLHLRRAQQKEAATMFQRTVLKAWQ 416 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 E+++A+ +K +L AV ++ ++ + Y QG L++L ++ A + Sbjct: 417 EIDDAMADFTAAQKRRDELTEAVHENEIAVETAKAQYVQGSSDFLNVLTLQNALLSSQSA 476 Query: 428 LSIAKRQLAKSYVDLYIAIGSGYN 451 + A+ +A + LY A+G G+ Sbjct: 477 QADAEAHVADAVTRLYRAVGGGWQ 500 >gi|126440818|ref|YP_001058662.1| Outer membrane protein [Burkholderia pseudomallei 668] gi|126220311|gb|ABN83817.1| outer membrane protein [Burkholderia pseudomallei 668] Length = 565 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 127/519 (24%), Positives = 227/519 (43%), Gaps = 93/519 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 24 CTVGPDFHPPRADV-PAQWHDVTATSASSASSAASPPAAGSGAPNAGAPPRSLPTVEADP 82 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 83 DPRWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQR 142 Query: 107 -----------------------------RFIPN----LKTNSTGQLD------------ 121 R P L+ + LD Sbjct: 143 EQLGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 202 Query: 122 --SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 203 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAV 262 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 263 ALTDEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 322 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 323 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 380 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 381 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 436 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 437 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 496 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 497 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 535 >gi|189468204|ref|ZP_03016989.1| hypothetical protein BACINT_04600 [Bacteroides intestinalis DSM 17393] gi|189436468|gb|EDV05453.1| hypothetical protein BACINT_04600 [Bacteroides intestinalis DSM 17393] Length = 458 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/463 (25%), Positives = 232/463 (50%), Gaps = 36/463 (7%) Query: 10 LFIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + +V+LA C +G Y +P + L P Q ++ ++I +WWE + DT+L L++ Sbjct: 11 IMVVVLAFSSCQLGKHYARPELNL-PQQLD-STEQDTLSIADRQWWELYTDTTLQALIER 68 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG--QLDSD-- 123 L+ N + A R+ KE R D F + + +S + + + + G SD Sbjct: 69 TLEYNKDMKIAAARV---KELAAMKRID-FANLFPQVSGKLYADKEAENYGGDNYSSDRS 124 Query: 124 --------WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++DL+G R + S+A+ L S AQ + K+++++++ +Y + Sbjct: 125 YEAKAIVSWEVDLWGNLRWAKDKSMADFLGSIEAQRAL-KMSLVAEVAQAYFELVALDNE 183 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++I Q L+ K+ + L+ L+F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 184 LAIVRQTLNARKEGVRLAKLRFEGGLTSETSYQQAQVELARTATLVPDLERKISIKENDI 243 Query: 234 STLLGYPATEFLHYMQKQSNNFQPN-LYIP--INIGIPADLIRNRPDIRYQEKKLADSVA 290 + L G Y QK + + P + +P + +G+P+ L+ RPD+R E+KL + A Sbjct: 244 AFLAG-------DYPQKIARSVLPEEVKLPESLPVGLPSTLLERRPDVRQAEQKLIAANA 296 Query: 291 KIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+A ++++P L+L L + F H+ G L P+F GK ++ ++ + Sbjct: 297 SVGLAYTNMFPRLALTAHYGLESAEFSDFLKSPYHFLSGS-LLTPLFAMGKNRAMLKAKK 355 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ +++ +++++VL A K+ NA+ ++ K+I + + ++ L+ + Y G Sbjct: 356 AAYEQEVYSYEKSVLTAFKDARNAIVDFSKIKEIYESRLQLEQAARSNVELAQLQYINGV 415 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD +R ++ LS A R + V LY A+G G+ Sbjct: 416 IGYLDVLDAQRGYFDAQIGLSNAIRDKQITLVRLYKALGGGWQ 458 >gi|120553520|ref|YP_957871.1| RND efflux system outer membrane lipoprotein [Marinobacter aquaeolei VT8] gi|120323369|gb|ABM17684.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter aquaeolei VT8] Length = 477 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/471 (25%), Positives = 230/471 (48%), Gaps = 26/471 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESFN 57 M + + +L ++ L GC++ P KP P +P ++ ++ D L WW + Sbjct: 1 MTVKVLLTTLMVLSLGGCSLAPTVKKPE-PSMPENWTSAR----LSADEKLPLDWWRGYG 55 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L LV+ AL N + A R+ A+ + +A+ +P S + N Sbjct: 56 DPALVTLVEEALDANNDLQLAAARVAEARALLTGQQAERYPLLEVEGSAVRQGPSEESVN 115 Query: 116 STG-------QLDS--DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 STG Q+ +++DL+G+ + E++ A L ++ A + +L VI ++ Y Sbjct: 116 STGGQPFNDIQVGGVLSYELDLWGRLANASEAARARLLASAANREAVRLAVIGEVANGYF 175 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R +I IA + + ++++ L +F G ++L+L + E+E+ + ES++P L + Sbjct: 176 NLRALDRQIDIAERTVSSRRESVALQRARFEGGEINELALRQAESELAAAESELPRLRQQ 235 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEK 283 + + ++ LLG + +N + +P +I G PADL+ RPDI E+ Sbjct: 236 RSLQRNALAVLLGRDPQRIVRSDISVANTI-GEMDVPASIPAGRPADLMVRRPDIAAAEQ 294 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +L + A+IG+A++ P +S G + L + + F G + W G L P+ D G+ Sbjct: 295 ELIAANAEIGVARAAFLPRISFEGLLGLRSASGGDLFQGSASTWQLGGSLVGPLLDFGRS 354 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ + +AE+ ++ I +++ + A +EV +A+ + + + V + + L+ Sbjct: 355 EALVNQAEARQRQALIAYRQAIQVAFREVLDAMAGVRGTEDRLEAQARQVAALRSTAKLA 414 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + G S L++LD ER+ E+DL +R +S V+LY A+G G+ Sbjct: 415 RLRFEGGASSYLEVLDAERSLFTTELDLVETRRDHLQSTVNLYRALGGGWQ 465 >gi|160888975|ref|ZP_02069978.1| hypothetical protein BACUNI_01395 [Bacteroides uniformis ATCC 8492] gi|317479262|ref|ZP_07938397.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] gi|156861442|gb|EDO54873.1| hypothetical protein BACUNI_01395 [Bacteroides uniformis ATCC 8492] gi|316904550|gb|EFV26369.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] Length = 458 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 232/460 (50%), Gaps = 27/460 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I L + L C VG Y +P M L P S+ ++ ++I +W + D++L L+ Sbjct: 9 ILLLSMFALTSCKVGKSYVRPEMAL-PD--SLAQQQDSMSIADEQWQAVYTDSTLRALID 65 Query: 67 IALQQNLTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS-- 122 AL+ N +L A R+ A + +SV A+L P + + R + N +S ++ Sbjct: 66 RALEYNKDMLIAASRVKEMAAQKRISV-ANLLPQLTGKVEAEREVENYGGHSRDVGNTYE 124 Query: 123 -----DWKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G R + + L S AQ + ++ +++++ +Y + + Sbjct: 125 AKALLSWELDLWGNLRWKKVAAVAEYLQSVEAQRAL-RMTIVAEVAQAYYELVALDTELE 183 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I Q ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++IS Sbjct: 184 IVRQTQKAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERRISLKENDISF 243 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G EF +++ NF L +P + +G+P+DL+ RPD+R E++L A++ Sbjct: 244 LVG----EFPTRIKRV--NFLQELDVPESLPVGLPSDLLERRPDVRVAEQQLRAEHARVK 297 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQ 352 +A ++++P L+L G L D + +S + P+F GK ++ + ++S + Sbjct: 298 VAYTNMFPRLALTGQFGLESDVLSNFLESPYSLLNGAVLAPLFGWGKNRAALNAQKASFE 357 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSL 411 + ++++TVLNA KE +NA+ N+ K+ V +L+ +E K + L+ + Y G + Sbjct: 358 AEVHSYEKTVLNAFKEAKNAIVDFNKIKE-VYQLRAKLERSAKGYVDLAQLQYINGVINY 416 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD +R ++ +S A R + V++Y A+G G+ Sbjct: 417 MDVLDAQRGYFDAQIGVSNAIRDELIAMVNVYKALGGGWQ 456 >gi|297621928|ref|YP_003710065.1| putative outer membrane efflux protein [Waddlia chondrophila WSU 86-1044] gi|297377229|gb|ADI39059.1| putative outer membrane efflux protein [Waddlia chondrophila WSU 86-1044] Length = 475 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 118/480 (24%), Positives = 226/480 (47%), Gaps = 42/480 (8%) Query: 4 LRAIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R + +FI+L A GC VGP ++ P + + + + L L+ E F+D LN Sbjct: 1 MRIRYVIFILLAAAGCRVGPRHSVPEVEI-SENWQSDSLSTLSCGSLLEVGELFDDCLLN 59 Query: 63 KLVKIALQQNLTILQATERI---------NAAK-----------ENILSVRADLFPSSYA 102 ++ L N + +A+ +I +AAK + L P ++ Sbjct: 60 TYLEQLLHDNYDLKRASIKICEAFALRDISAAKLLPFIDGRIAYNSAKPAGGILQPGDFS 119 Query: 103 SISHRFIPNLKTNS-TGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKL 160 S S N+K + D+ W+IDLFG+R R +ES+ A++ A +++ ++ Sbjct: 120 SGSVGIPLNIKQQTFISDFDAFWEIDLFGRRQREVESATASIQMERASYHDLIVSLTAEF 179 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R ++ + + + D+ K+ +E + QG S+ L+ E + + + +++P Sbjct: 180 SRTYLKLRERQKCLELVRKERDVLKEIVEEYQKRLDQGLDSEFFLLDSEKDYEQLAAEVP 239 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE ++++S LLG P + + + P + I +G P+DL+R RPDIR+ Sbjct: 240 MLEGEILSLIYHLSILLGKPPEALVKELSSAAE--LPQMISVIPVGFPSDLLRRRPDIRF 297 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+++A + A +G+A +DL+P +L G+ H + G W +G L P F G Sbjct: 298 AERQIAKATADVGVAVADLFPKFTLTGNYGFQNLHLGNTRGNGESWGYGGNLITPFFHGG 357 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +K+N++R + E + +++ VL A++E E+ + S + ++ + + + Sbjct: 358 SLKANVKRFQFIRMESLMAYEQAVLRALEESESTIASFLKSRESTQNREKGWMRADQLFA 417 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD-------LYIAIGSGYN 451 Y G L +L+ +R + A+R+ A SYV+ LY ++GSG+ Sbjct: 418 HGERLYEMGLSDTLRLLERKRRAIQ-------AEREWATSYVETEIQLIALYKSLGSGWQ 470 >gi|170701690|ref|ZP_02892631.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170133412|gb|EDT01799.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 486 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 109/430 (25%), Positives = 200/430 (46%), Gaps = 32/430 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P +F + + D WW F D L + V +AL QN Sbjct: 18 GCAVGPDYVRPDVAM-PQRFLGQAGVDQRHAAADADLATWWTGFGDPQLTRFVTLALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T NS D Sbjct: 77 LDLAQAAARVAQARAGLSAANAALLPSGEVSGQAARVYQSVETPLGRVLNSAPGFDRHGS 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 137 DYEADFNASWELDVFGGLRRGREAALADYQASEAGAVATRLAVAAQTADIYIAIRGLQGR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + L + +G ++L + + E + + + +P LE + ++ + Sbjct: 197 LKVARHQVQTEQDLLSTISLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDTAMNAL 256 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A + A+I Sbjct: 257 DVMLGSQPGTHRAELLDGGDVPVAPRIAA---TGTPGELLRRRPDLIVAERRVAAANARI 313 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A S+ YP SL+G I + N F G + L +FD G+I + I +A+ Sbjct: 314 GVAISEYYPKFSLSGLIGSATTMGAGNLFTGGANQAAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 374 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAVLAGGVDSLGRARAASFAAYQKGV 433 Query: 409 YSLLDILDIE 418 SL+++L + Sbjct: 434 VSLIEVLQAD 443 >gi|254255154|ref|ZP_04948470.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124900891|gb|EAY71641.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 504 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 121/456 (26%), Positives = 227/456 (49%), Gaps = 30/456 (6%) Query: 19 TVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQ 71 +VGP+Y P PL N L+ D + WW+ ++D L+ LV+ AL+ Sbjct: 24 SVGPDYRPPQQAYVNAPLANHALDDANG-TLVTHDAVPGNWWQLYDDPVLDDLVRSALKS 82 Query: 72 NLTILQATE---RINAA-----KENILSVRADLFPSSYASISHRFI-----PNLKTNSTG 118 N + A R AA +++ S RA+ + +++ P + + G Sbjct: 83 NTDLRVAAANLARSRAALEVANEQSGFSGRAEAAVQRAQESAEQYLLENKLPVVNEGTVG 142 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L+ +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ +Y+++ + ++IA Sbjct: 143 -LNVSYELDLFGKLRRGVEAARADSEAVQAAGDLARITVVADVVRAYVESCSAGDELAIA 201 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L L ++ + LS G ++ + + +++++ +DIP E ++ + ++ LL Sbjct: 202 KQSLALQRQRVALSQRLRDVGRGNQTDVTRGVTQVRTLSADIPRFESRRKIAQYQLAALL 261 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + + + P L PI IG A L+R RPD+R E++LA + A+IG+A + Sbjct: 262 ARAPADLPKAVVECER--LPKLRQPIPIGDGAALLRRRPDVREAERQLAAATARIGVATA 319 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 LYPS+S+ GS+ + D F WSFGP + G+ ++ +R AE++ Sbjct: 320 ALYPSVSIGASAGSVGVAAD-LFSSTTNRWSFGPLISWTFPVNGQ-RARVREAEAATGGA 377 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + VLNA++E +++L + D + L+ A E + S + Y GR S + Sbjct: 378 LAHFDGVVLNALRETQSSLATYAADVQRADALRTAYESARSSADETHRLYVAGRESFISD 437 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD R V ++ A+ Q+A V L++A+G G+ Sbjct: 438 LDATRTLTSVRAQVAAAEAQVAADQVRLFLALGGGW 473 >gi|21233587|ref|NP_639504.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770553|ref|YP_245315.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. 8004] gi|188993779|ref|YP_001905789.1| putative outer membrane efflux protein [Xanthomonas campestris pv. campestris str. B100] gi|21115451|gb|AAM43386.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575885|gb|AAY51295.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. 8004] gi|167735539|emb|CAP53754.1| putative outer membrane efflux protein [Xanthomonas campestris pv. campestris] Length = 483 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 128/467 (27%), Positives = 224/467 (47%), Gaps = 47/467 (10%) Query: 19 TVGPEYTKP----------HMPLLPTQFSIGNSKNLINID-TLKWWESFNDTSLNKLVKI 67 TVGP+Y P + P L T GN++ +WW + D L+ LV+ Sbjct: 23 TVGPDYALPREAVYNRPAANAPFLDT----GNAQVQPGAPLPARWWALYQDPMLDGLVEQ 78 Query: 68 ALQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASISHRFIP-- 110 AL+ N+ + A+ R A E L RA + S+ A + +P Sbjct: 79 ALRDNVELKVASANLRRAAAVYEQALDAGGFDYEVEAGVSRAQI--SAEAFLQEEKLPVF 136 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 NL + G+ ++ DLFG+ +H E++ A+ +A A +D+A+++V +++ SY++ + Sbjct: 137 NL---ADGKFGVSYQFDLFGKLQHGAEAAHADTQAAQAAIDLARVSVAAQVAGSYVEICN 193 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +A L L +++ ++ + G + L + A++ +E+ +P L + Sbjct: 194 ANHELHVAEHSLQLQQRSRTVTQRLISAGRGTPPDLARATAQVAMLEAALPPLRARRQAA 253 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ LLG E + S P L PI IG L+ RPD+R E++LA + Sbjct: 254 GYALAALLGKTPGELPAGVD--SCAHAPALQQPIPIGDGRTLLARRPDVRQAERRLAAAT 311 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A ++LYP + L GSI T D P TH WS GP + + G + +R Sbjct: 312 ARIGVATAELYPDIRLGGSIGATGLLADIGEPA--THAWSIGPLISWTLPSSGA-HARVR 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 E+ A + TVL A++EV+ L+ +D + L+ A + + + S + Y+ Sbjct: 369 ATEAGADAAVAQFDHTVLQALREVQTTLSRYAQDLDRLRLLEQAQQQAELASSQNRRLYQ 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 GR L LD ER A ++ L+ A+ Q++K + L++A+G G+ P Sbjct: 429 GGRTPYLSSLDAERTLATADMTLADAQAQVSKDQIQLFLALGGGWEP 475 >gi|225159130|ref|ZP_03725436.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] gi|224802285|gb|EEG20551.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] Length = 506 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 123/481 (25%), Positives = 227/481 (47%), Gaps = 62/481 (12%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKN------------------LINIDTLKWWESFND 58 GC VGP+Y P + P + +S + + WW+ + D Sbjct: 40 GCAVGPDYQPPVIKSPPAFRTADDSTDGSTLTGTGQPELTAPPAKPADFGAAPWWDVYTD 99 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF--------I 109 +L L++ AL N I A R+ A++ + + R+ +PS +Y+ + R Sbjct: 100 PALASLIQEALASNYDIAIAATRVEQARQAVATARSGYYPSVNYSGAASRGRNQFSGNPS 159 Query: 110 PNLKT---NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP--- 162 P L T ++T + + W++DL+G+ RR ES+ A Y + A+ VI+ LI Sbjct: 160 PTLGTTGDDATVVVGASWELDLWGRVRRMDESARAR----YLATEEARNAVITTLIADVA 215 Query: 163 -SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 ++ + ++IA D ++++ L + + G S + + EA + + IP Sbjct: 216 QAWFELIELDAELTIAKDTRDSFQRSYTLFNERLKGGIASTIETARAEAAVAQTAAAIPE 275 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 +E+S + + I+ LLG + +Q+ P+ G+PADL+ RPD+R Sbjct: 276 IERSIILKENQINLLLGRAPGP----ITRQATLDTLVAPTPLPAGLPADLLARRPDLRRS 331 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYLP 333 E+ L + A IG+A +D YP +SL G++ TH G WS L P Sbjct: 332 EQLLRSANADIGVAIADYYPRISLTGALGRISPDLSDFTH-----GTGNLWSILGGLTGP 386 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH---AV 390 IF G+IK+++ A + + + +++VLNA+ EV AL ++ +K + T+ + A Sbjct: 387 IFQGGRIKASVAAARARWDQARLEHEQSVLNALNEVSEAL--VSREKIVTTRAEQERRAA 444 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L ++++ +S+ Y GR S ++L+ ++ + D++ A+R + V LY ++G G+ Sbjct: 445 AL-QQAVKISLDRYDAGRASYYEVLEAQQQLFPAQTDVARARRDQHLALVRLYRSLGGGW 503 Query: 451 N 451 + Sbjct: 504 S 504 >gi|171912826|ref|ZP_02928296.1| hypothetical protein VspiD_16640 [Verrucomicrobium spinosum DSM 4136] Length = 468 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 123/461 (26%), Positives = 213/461 (46%), Gaps = 25/461 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHM-PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L I+ GCTVGP+Y KP + L P + + +WW F D LN+L +A Sbjct: 13 LPILAFTGCTVGPKYEKPDVSALTPATWKWQPASPKDAEPRGEWWRIFKDAELNRLEAMA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-------------FIPNLKT 114 L N I A RI+ A+ A P S ++ R IP Sbjct: 73 LGNNQEIRMAMARIDQARAAAGLSAAAYVPQVSVDGLAQRERTSGNPPSPVPIAIPAAHI 132 Query: 115 NSTG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 N+ L ++IDL+G+ RR IES+ A +D++ L++ + Y R Sbjct: 133 NTFNVPLQLSYEIDLWGRVRRSIESANAQVDASVGDFHSVLLSLTGDVASQYFLIRSLDS 192 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ + L +K L +F G + + ++E+ ++ +D+ +++ V+ Sbjct: 193 QMAALQRTLASQEKTFGLIDQRFAAGTIPEADHARAKSEVATVRADMADVKRQREETVNV 252 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L G PA+ F + + P I GIPA+++ RPD+ E+ +A A+I Sbjct: 253 LALLCGQPASRF-SVSKAEIQGTPPK----IPAGIPAEVLERRPDVAAAERLVAARNAEI 307 Query: 293 GIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+ + +P++SL G L+ D S F + WSFGP + +PI K+ + RA + Sbjct: 308 GVEIAGYFPTVSLTGQAGYLSKDTSSLFNADSRVWSFGPSVSVPITGIFVTKAKVARARA 367 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E ++++VL A+K+VE +L I K+ + A++ K+ +L+ Y G Sbjct: 368 VHEESTAKFRQSVLAAVKDVETSLIQIRYRKEQAVAQKEALDAALKATALTRQLYEGGSI 427 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L++LD ER + E ++ K Q + V L A+G + Sbjct: 428 SYLELLDAERTSLLRERQYALLKAQGHIATVGLIRALGGSW 468 >gi|237809204|ref|YP_002893644.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] gi|237501465|gb|ACQ94058.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] Length = 495 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 117/464 (25%), Positives = 219/464 (47%), Gaps = 26/464 (5%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLN 62 A +L V+L GC ++ P P +P+ P + + +S + L W F D L Sbjct: 16 ASLALSAVVLTGCMSLAPAPDTPPLPV-PEVWPGHLESSTEGAHAGELAWQAYFTDPLLQ 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ 119 +L++ AL+ N + A R+ A R+D FP+ R +L + Q Sbjct: 75 RLIETALENNRDLRLAALRVEEASAAFRIQRSDRFPAVGVGAQGGRARVPGDLNMSGRSQ 134 Query: 120 LD---------SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + S W++DL+G+ R++E ++L ++ A L +I+++ Y+ R Sbjct: 135 VGGEYRAEVGLSTWELDLWGRVRNLEDAALQRWLASDAARQAVHLALIAQVADGYLGLRE 194 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ER++IA Q + +++ + + G+TSKL L +++ + ++ + LE++ Sbjct: 195 IDERVAIARQTVATREESYRIFRRRVEVGSTSKLDLTQVQTLLNQAQALLTQLEQARATQ 254 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +H ++ L+G P + ++ + + + G+P++L+ +RPDI E +L Sbjct: 255 LHALALLVGADPGP-----LPTKAPFDETTVLAELRTGLPSELLVSRPDIIAAEHQLRAG 309 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ P ++L GS D F + W+F P L LPIFD G+ ++N+ Sbjct: 310 DANIGAARAAFLPRIALTGSFGTASSDLDGLFDSGSRAWTFMPTLSLPIFDGGRRRANLE 369 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +E +++T+ A +EV +AL++ + +T + +E + L+ + Y Sbjct: 370 LSEVRRDIAVAGYEKTIQTAFREVADALSAKYWLAEQLTIQRANLEAQSERARLAQLRYD 429 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++LD +R L A+R L S V LY A+G G Sbjct: 430 NGSAAFLEVLDAQRDLLDAGQQLVQARRALLSSQVALYAALGGG 473 >gi|330974172|gb|EGH74238.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 490 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 231/466 (49%), Gaps = 32/466 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIA 68 LL+GC VGP+Y +P PL P ++ + + NI + WW+ F+D L+ V A Sbjct: 15 LLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPLVSAAWWDGFDDPLLSSFVSRA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPN----LKTNSTG-- 118 L QNL + QA+ ++ A+ + A L PS + + +H+ + + ++ G Sbjct: 73 LAQNLDLAQASAQLAQARAGADAATAALLPSGNIDAQTARAHQSVETPLGQVLNSAPGYD 132 Query: 119 --------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L + W++D+FG RR +++LA ++ A V A+L V ++ +YI R Sbjct: 133 RYGNAYEANLTASWELDVFGGLRRSRQAALAEYQASQAGVAAARLAVAARTADTYITIRG 192 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R++I ++ + + +E L +G + + ++EAE+ +++ +P L+ Sbjct: 193 LQARLAITNRQVKTRQDLLEKVQLLHERGLSPDYEVRQIEAELLQVQATVPILQTGLDAA 252 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ + +LG P H P+ +IG PADL+R RPD+ E++LA S Sbjct: 253 MNALDVMLGVPPGT--HRGSLAETGRIPHAPELTSIGTPADLLRRRPDLIVAERRLAASN 310 Query: 290 AKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A S+ YP LSL+ + A++ N F G + + L +FD G++ + I Sbjct: 311 ARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGILGLRWRLFDFGRVNARIS 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A+ E ++++VL A ++VENA +S+ + L + S +Y Sbjct: 371 QAKGQEAEALAAYRQSVLRATEDVENAFSSLASRETQAAMLGKGETALASARQSSFASYS 430 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G SL+++L + +V + A+ + A++ V ++ A+G G+ Sbjct: 431 KGAASLIEVLRADEKMLQVADAKAQAQVESAQAAVAVFKALGGGWQ 476 >gi|327480731|gb|AEA84041.1| outer membrane efflux protein [Pseudomonas stutzeri DSM 4166] Length = 484 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 31/469 (6%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------WWESFNDTS 60 L + LLA C+ VGP+Y P ++ + G L N + + WW+ ++D Sbjct: 9 LPLLVTLLAACSAVGPDYRVPDQAVVRQAAAQGPFDTLGNPEVEQTPLPDGWWQLYDDPL 68 Query: 61 LNKLVKIALQQNLTILQATERINAA----------KENILS-----VRADLFPSSYASIS 105 L++LV+ AL N I QA + A +E ++ R L SS A Sbjct: 69 LDRLVREALAGNRDIRQAHHNLRQAYQGFQMAHHAQEVVVGGDGSLARGQL--SSEALAL 126 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +P + G L +++DLFGQ RR E++ A D++ + ++ A+++ ++ ++ SY Sbjct: 127 EEKLPVMNLADAG-LAVSYQLDLFGQLRRGAEAAGATADASASLLEAARISAVAGVVRSY 185 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + A H E ++IA L + ++ +E++ G +++ + + A+++++ +++P E Sbjct: 186 MTACHAGEELAIAEHSLAIQQRQLEVASRLLAGGRGNEVDVARARAQVETLRAELPPFEA 245 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ ++ LLG+ E + N P L PI +G A L+R RPDIR E+ Sbjct: 246 KKAAALYRLAALLGHTPGELPE--AAAACNHAPQLSQPIPLGDGAALLRRRPDIRAAERS 303 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 LA + A+IG+A + +YP +SL G+ T ++ W+FGP + F ++ Sbjct: 304 LAAATAQIGVATAMMYPQISLGGTAGYTGMLEHLGDAVTQRWAFGPSISW-HFPTQVDRA 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +R E+ A + VL A++E + L+ D + L A + + + + Sbjct: 363 RVRAMEAGADAALARFDGVVLEALRETQTLLSRYAHDLQRDQALHEARDAARNAADHTRR 422 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++GR LD LD ER A + L+ ++ QL+ VDL++A+G G+ Sbjct: 423 LYQEGRLGYLDSLDAERTLANAQAALAASQAQLSLDQVDLFLALGGGWR 471 >gi|309779324|ref|ZP_07674086.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] gi|308921882|gb|EFP67517.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] Length = 486 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 120/471 (25%), Positives = 224/471 (47%), Gaps = 32/471 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDTSL 61 A+ + IV LAGC++ P Y +P M + P Q+ ++ WW+ FND L Sbjct: 11 ALAASLIVSLAGCSLAPTYERPAMDV-PAQWQTEAPWRAAQPADAAPKGPWWQRFNDPQL 69 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRF 108 ++L+ ALQ+N ++ A + A+ RA L P SS +S Sbjct: 70 DRLITQALQENQSLKVALSNLEQAQAQTRVARASLLPTITATNNDTRTRTSSERPLSSYT 129 Query: 109 IPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P + T + + D ++ DLFG+ R+ + ++ A+ A A V+ +L + +++ ++ Sbjct: 130 SPTMSTVQSDFVLRADVSYEADLFGRVRNTVANAAASEAQAGANVENFRLLLAAQVATTW 189 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R I++ + L L +K ++ + G S L L + +A + S + L K Sbjct: 190 YNLRETDAEIAVVQEGLALQRKALDFVTSRHQDGVASGLDLAQQQALVDSTATQAELLTK 249 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H ++TL+G PA F H P I + +P+D+I RPD+ E+ Sbjct: 250 QRAQYEHALATLVGTPAPAF-HIDPIPLQGTAPQ----IPVALPSDVIERRPDVAAAERG 304 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++G+A++ +PS+ LNG + F WSFG ++ +FD G+ + Sbjct: 305 AAAANAQVGVARAAFFPSVMLNGGAGWESRDLALLFSAPTLLWSFGTQIAQTVFDAGRTR 364 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A ++ Q +++TVL A++EVE+ L + ++ ++ +HAVE +K ++ Sbjct: 365 ARVDFANAAYQGAIANYRQTVLGALQEVEDGLAGLQSLERAASQARHAVESARKVYDIAG 424 Query: 402 INYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + LD++ +++ + + I +Q+ S V L A+G +N Sbjct: 425 ARYEGGLATSLDVITAQQSLLNSQRAAVQILGQQMTTS-VFLVKAVGGDWN 474 >gi|313159304|gb|EFR58669.1| putative outer membrane efflux protein OprM [Alistipes sp. HGB5] Length = 454 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 119/462 (25%), Positives = 222/462 (48%), Gaps = 37/462 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLV 65 +F A CT P + P + + P + G + DT + WW F DT LN LV Sbjct: 9 IFAAFTAACT--PRFYPPRVSV-PDDYIYGRG---FSEDTTRFGPEWWTLFGDTVLNNLV 62 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQLDSD 123 AL N + A R+ A+ N+ SVRA P ++ + P K + ++ Sbjct: 63 ARALDNNRDVAVAASRVEEARLNLKSVRAQYLPQVGLGVTAEGEYTPATKIVQSYAVEPS 122 Query: 124 --WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++ LFGQ R+ + ++ A + S+ + +L + +++ +Y ++ ++IA Q Sbjct: 123 LSWEVALFGQLRNAKRAAKAQIASSEWALRGVRLALAAEVATTYFTLLEYERDLAIARQS 182 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L +++ L F G + ++L + + + + E+DIP ++ ++ LLG Sbjct: 183 CALRRESAALIDSMFRYGMSDGVALEQARSLVYTAEADIPQYRRAVAQTRLSLDILLGET 242 Query: 241 A--TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 T+ + +++P I +G+P++L+ RPDI + + A++GIA+ + Sbjct: 243 PRRTDSAGAGLRLLTDYRP---ADIPVGLPSELLERRPDIMQARYDMLAAAAEVGIARGN 299 Query: 299 LYPSLSLN--GSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +PS++L G IA NS G + W L LP+F+ G+ +RRAE +A Sbjct: 300 RFPSIALTAKGGIA---SNSIKGLTSANPWAWDALGSLTLPVFNFGR----LRRAEQAAM 352 Query: 353 EQY----ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E+Y +T+++TVL A +VE AL +I ++ + V + + +++ YR G Sbjct: 353 ERYTQSALTYEQTVLTAFSDVEQALVAIATYRRQTERYGELVLANDRIAAMTQALYRSGL 412 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD++D +R+ + +++ Q +YV+L A+G G+ Sbjct: 413 SDYLDVIDAQRSLYQSQMEFVNLVAQQYINYVNLCKALGGGW 454 >gi|146307451|ref|YP_001187916.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina ymp] gi|145575652|gb|ABP85184.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas mendocina ymp] Length = 509 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 120/480 (25%), Positives = 234/480 (48%), Gaps = 44/480 (9%) Query: 7 IFSLFIVL--LAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTS 60 + LF++L L GC +GP+Y +P + P QF + K D L+ WWE + D Sbjct: 24 CYGLFVLLGMLGGCMLGPDYQRPELAA-PMQFKQVAGWKAATPGDALERGAWWELYGDAE 82 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISH----------RF 108 LN LV+ N + A + A+ + RA +P S A ++ R Sbjct: 83 LNALVERLHLSNQNLAAAEAQYRQARALVRGARARFYPTLSGSAGVTRAGQGGGDSTIRT 142 Query: 109 IPNLKTNSTG----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + + +G L++ W++D++G+ RR +E+S A +++ A + A+L++ Sbjct: 143 ADGVTVSGSGASSISKSYDLSLNAAWELDVWGKLRRGLEASRAEFEASAADLAAARLSLQ 202 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S+L+ +Y+ R E+ + + Y +++ L+ ++ G K + + +++S ++ Sbjct: 203 SELVQNYLQLRVLDEQKRLLDATVAAYARSLRLTENQYRAGIVPKSDVTQATTQLRSTQA 262 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 LE H I+ L+G E L +++S P PI + +P+ L+ RPD Sbjct: 263 QAVDLEWQRAQLEHAIAVLVGVSPAE-LSIAERESVPQLP----PIPLALPSQLLERRPD 317 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLP 333 I E+++ + A+IG+A++ +P L+++ S +SF + N WS GP+L L Sbjct: 318 IAAAERRVMAANAQIGVAEAAWFPDLTISASGGY-RGSSFADWIEVPNRFWSLGPQLALT 376 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G ++ + R+E++ + +++ VL+ +EVE+ L + ++ Q A++ Sbjct: 377 LFDGGTRRAELERSEAAYDQTVAQYRQAVLDGFREVEDYLVQLRVLEQESEIQQQALDAA 436 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATA--KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S+ L YR G +++++ ATA +L++ +L S V L A+G G+ Sbjct: 437 RESLRLIENQYRAGTLDYNSVVNVQ-ATALNNERSNLTLLGSRLTAS-VQLIAALGGGWQ 494 >gi|254884716|ref|ZP_05257426.1| outer membrane efflux protein oprM [Bacteroides sp. 4_3_47FAA] gi|254837509|gb|EET17818.1| outer membrane efflux protein oprM [Bacteroides sp. 4_3_47FAA] Length = 442 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 98/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L+ L+ +A++QN ++L A RI+ AK N+ R +P+ Sbjct: 54 WWTVFQDATLDSLIHVAVRQNPSVLTALNRIDMAKANLRIARGGYYPALSLDAGWNRQQT 113 Query: 112 LKTNSTGQLDS-----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 TGQ S W++D+FG R+ +++ N ++ + + +++ ++ Sbjct: 114 SGNTGTGQPQSRVGYYDATVNMSWQVDVFGSIRQRVKAQKENFAASREEYNATMVSLCAE 173 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y + R ++ +S+ + K ++++ +++ G SKL + + ++ S + I Sbjct: 174 VASAYFNLRETQQELSVLQRNALSQKAVVDITEVRYNTGLASKLDVAQAKSVYYSTLASI 233 Query: 220 PTLEKSFRMNVHNISTLLG-YP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 P E ++ ++ LLG YP T L ++ P+ P+ +G+P L+ RP Sbjct: 234 PATESGIIQYMNALAVLLGLYPQDVTAAL-----ETGKPLPDYIEPVGVGLPGQLLLRRP 288 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNTH-WSFGPKLYLP 333 D+R E+++ A +G +K+D PS LNGS +HD F ++ WS P + Sbjct: 289 DVRVAERQVNAQAALLGASKTDWLPSFFLNGSFGYASHDMKDFTRRSSMTWSIAPSMSWT 348 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G+ +N+R + E + TVL A++EV+NA++S K + + + Sbjct: 349 IFNGGQRANNVRLQRAQLDETINQFNTTVLTAVQEVDNAMSSYKNSIKQIVACREMLNQG 408 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERA 420 K++ LS+ Y+QG ++LD +R+ Sbjct: 409 KEAFKLSLDLYKQGLSPFQNVLDAQRS 435 >gi|206563790|ref|YP_002234553.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198039830|emb|CAR55804.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 507 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 119/486 (24%), Positives = 214/486 (44%), Gaps = 57/486 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLL----------------PTQFSIGNSKNLINIDTLKWWESF 56 V LA C VGP++ +P P + + +W F Sbjct: 14 VTLAACAVGPDFKRPDTATAARFARDAHPATQHDAAPADTAPETPPDASAAADATFWRGF 73 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP---- 110 D +L +L+ AL N + A R +A+ + D +P+ AS I HR + Sbjct: 74 GDPTLTQLIDAALAANQDLQVAVSRYDASNALLSQATFDRYPTITASGQIGHRLMSKDQA 133 Query: 111 --------NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + T+S G +++ W++DLFG+ RR IES A ++ A V ++ + ++ Sbjct: 134 FGAPRSQRDAPTSSIG-INAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAGEVA 192 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+D R +ER+ IA + D K+ + L + + G S+L + A+ +S S I Sbjct: 193 STYVDLRGSQERLRIARENADNQKQTLALINARVGAGRGSELDAARARAQYESTTSRIAV 252 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-------PNLYIPINIGIPADLIRN 274 E + ++ H ++ L G + P L I+ G P +L+R Sbjct: 253 YEAAIGVDEHRLAVLTGQTPDALIGRFDLPGTAASTGTPVLLPALAADIDPGAPGELLRR 312 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------W 324 RPD+ E +L + A++G+A +DL+P +L+G + T F G +T+ W Sbjct: 313 RPDVAAAEARLHAATARVGVATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDW 372 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF D G++++ I +++ A Q +++TVL A++E ENAL + + Sbjct: 373 SF--------LDVGRVRARIAASDAEAAGQLAQYRQTVLGALEETENALLRVARTRDETA 424 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L A + ++ L+ + G ++LD +R + + + + + A S V LY Sbjct: 425 HLVRAADDSARAAQLAQARFSAGAIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYK 484 Query: 445 AIGSGY 450 A+ G+ Sbjct: 485 ALAGGW 490 >gi|124268765|ref|YP_001022769.1| outer membrane protein OprN [Methylibium petroleiphilum PM1] gi|124261540|gb|ABM96534.1| outer membrane protein OprN precursor [Methylibium petroleiphilum PM1] Length = 499 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 116/469 (24%), Positives = 227/469 (48%), Gaps = 26/469 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN---LINIDTLKWWESFNDTSLN 62 + + ++ GC VGP Y +P + + G S N ++ D +W F D +L+ Sbjct: 14 GVLAAAALIATGCAVGPNYERPARTVDAEFINAGASANNTQPVSADIASFWRGFGDEALS 73 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI------PNL-KT 114 LV+ AL N + A R+ A+ ++ +A L P ++ + R + P L ++ Sbjct: 74 TLVERALAANGDVRIAQARLQEARADLGLAQAALLPDVGISAGATRGVTPITQAPGLSRS 133 Query: 115 NSTGQL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + TG + ++W++D FG+ RR ES+ A + ++ A + A V +++ +Y++ R Sbjct: 134 DRTGTVYDAGFVANWELDFFGRNRRASESAAALVAASEAGLHAAHTAVAAEVARNYLELR 193 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++R+ +A L ++++ ++ + G ++L + + +++ E+ P L+ S Sbjct: 194 GLQQRLQVADTSLVNQRESLRITEARLDAGRGTQLDIARARTLVENTEATRPALQASIDR 253 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKK 284 ++ ++TL P + + P L + + +G + RPD+ E++ Sbjct: 254 TIYRLATLSAQPPRALATTLAPPAA--LPGLPVTDLSALPLGTTEAWLARRPDLIAAERQ 311 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA + A IG+AK+DLYP +SL+G + L T + + +S G L + D G+++ Sbjct: 312 LAAATANIGVAKADLYPRISLSGLLGLNAATLGDLGRSESAIYSLGAGLSWSVLDFGRVR 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S I +E+ AQ ++++TV A++E E ALT + + +L A +++ L+ Sbjct: 372 SRIAASEARAQASLASYEQTVATALEETEGALTQFTRNAQRAERLDRAARSAEEAAELAR 431 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G L +LD ER L A+ A + V +Y A+G G+ Sbjct: 432 LRYDAGVTDFLVVLDAEREVLASRDQLVQAQVGTATALVSVYRALGGGW 480 >gi|307823182|ref|ZP_07653412.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307735957|gb|EFO06804.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 472 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 119/457 (26%), Positives = 214/457 (46%), Gaps = 22/457 (4%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LR + ++L C PE M P Q++ N+ N +W SF D +L+ Sbjct: 26 LRLLICTIVLLTTSCATAPERNAIDMTKSPPQWATVNAP--ANPIATQWLSSFADPALSA 83 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS- 122 LVK AL N + A R+++A+E A +P + + +R L ++ TG ++ Sbjct: 84 LVKDALNNNYDLKAAAARVDSAREQARIDGAARWPQLFFAAGYRR-DALPSSETGAFEAL 142 Query: 123 ---DWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+ID++G+ + + + ++ A A+L++ ++ SY + + +A Sbjct: 143 FTMSWEIDVWGRIKAAQQATGQEAEAVAADYHGARLSLAARTAQSYFELIEANLQAEVAE 202 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + + +EL +F +G T L L + ++ + E+ + ++ + LLG Sbjct: 203 QSIKDRRTIVELVRGRFARGLTRGLDLRLVLTDLANAEAQLAGSRNQVQIVTRRLEVLLG 262 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 YP ++ + P + G+P++L+ RPD+ +L S +++ AK Sbjct: 263 RYPGNSL------KNRSALPAPPTALAAGLPSELLTRRPDLIAALSRLQASDSRVESAKK 316 Query: 298 DLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 L P ++L GS ALT W+ L P+F G++K+ IR E+ + Sbjct: 317 TLLPRITLTAAGGTGSPALTE--LIDPRAVAWNLAMGLVQPVFTGGRLKAGIRLNEARTE 374 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E + +Q T LNA +EVE AL + ++ L+ AVE + S L++ +YRQG +L Sbjct: 375 EAFNQYQSTALNAFREVEQALAAEFWLREQELALKEAVEQTQASRKLAVYSYRQGLIEIL 434 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD R+T + +RQL + +DLY+A+G G Sbjct: 435 TLLDSYRSTLNAQSAHLSVQRQLLSNRIDLYLALGGG 471 >gi|189465647|ref|ZP_03014432.1| hypothetical protein BACINT_02007 [Bacteroides intestinalis DSM 17393] gi|189437921|gb|EDV06906.1| hypothetical protein BACINT_02007 [Bacteroides intestinalis DSM 17393] Length = 490 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 108/455 (23%), Positives = 218/455 (47%), Gaps = 40/455 (8%) Query: 27 PHMPLLPTQFSIGNSK------NLINIDTL----KWWESFNDTSLNKLVKIALQQNLTIL 76 P+ +PT NS NL + L +WW++FND L+ L+ +A +N ++L Sbjct: 42 PNSKTVPTSAGTTNSTMASANDNLFSGQILPVDDQWWKAFNDPVLDSLISVASGENYSVL 101 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL------------DSDW 124 A +R+ A+ ++ R++ FPS S++ ++ + +T +L ++ W Sbjct: 102 AAIDRMEQARASLRMERSNFFPS--ISLNGGWLRQQSSGNTTELPQSITHYYDASLNASW 159 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++D+FG R+ +++ + + ++++ +++ +YI+ R ++ + + Sbjct: 160 ELDIFGSIRQRVKAQRETFQARREEYISVQVSLCAQVASAYINLRELQQELQVVMHNCRT 219 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + ++ +++ G SKL + + ++ S ++ +P LE +++++ LLG E Sbjct: 220 QEEVLNITEVRYNTGLVSKLDVAQAKSVYFSTKASVPQLESGISQYINSLAILLGTYPQE 279 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 +++ P+ PI IG+PADL+ RPD+R E+ + A +G +KSD P + Sbjct: 280 IRPTLERIGK--LPDYMEPIGIGLPADLLLRRPDVRQAERLVNAQAALLGASKSDWLPQV 337 Query: 304 SLNGSIA--------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L GS+ LT S + P L +F K+ + ++A + E Sbjct: 338 FLKGSVGYAARDLKDLTRRKSM-----TFEIAPTLSWTLFSGTKLVNATKQARAQLDEAV 392 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + ETVL A++E +NA+ + K + L+ ++++ LS+ Y+QG ++L Sbjct: 393 HNFNETVLTAVQETDNAMNNYRNSIKQIVALREVRNQGQETLKLSLELYKQGLSPFQNVL 452 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D R+ E L+ A+ V LY A+G GY Sbjct: 453 DALRSLLTYENQLTQAEGSSLLYLVSLYQALGGGY 487 >gi|54298518|ref|YP_124887.1| hypothetical protein lpp2582 [Legionella pneumophila str. Paris] gi|53752303|emb|CAH13735.1| hypothetical protein lpp2582 [Legionella pneumophila str. Paris] Length = 520 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 112/470 (23%), Positives = 215/470 (45%), Gaps = 25/470 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ + L ++L+ C VGP + +P + + WW+ F D +L Sbjct: 4 MLKILALLSCLILSSCLVGPNFKEPKKDAANYWLTSSPAIKQSAFQNANWWKVFKDPTLT 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FI 109 L+ NL++ A R+ A+ + +L+P A + Sbjct: 64 ALIDNGYHNNLSLQMAGVRVLQARAQLAQSVGELYPQQQAMVGDYNYNRVGGNQLQGLLP 123 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T S G + W++D +G+ RR I+S+ A ++ A D A + + S + ++I R Sbjct: 124 PDFLTASLG-FSASWELDFWGKYRRAIQSNDALFLASLAAYDSALVTLTSDIASTFIKIR 182 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E I + + + +++++ ++ G TS L + + E+ +S +P + Sbjct: 183 TSEELIKVTKTNIQVQAMSLKIAKDRYYGGQTSLLDVEQAATELAETQSKLPQYVSDLQH 242 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG + ++K N P + +GIP ++I RPD+ + Sbjct: 243 QKDILAVLLGTTPDKVDDLLKK--NKGIPKASAVVEVGIPKEVIARRPDVYQARMEAIAQ 300 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKI 340 A IG K++LYPSLSL G+ +N F N + GP L P+ + G+I Sbjct: 301 SAAIGAVKANLYPSLSLVGTFVFASNNIGNSTISDIFNWSNRNIVAGPSLTWPLLNYGQI 360 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R +++ Q+ + + VL +EV++ +T E +K V+ L+ A +S L+ Sbjct: 361 TNAVRAQDAAFQQALLNYLNLVLKVQQEVQDNITRYVEGQKTVSSLKKANASAIESTRLA 420 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y++G + +L+ E+ +V+ L A +LA S V LY ++G G+ Sbjct: 421 LVRYKEGEANYTTVLNAEQQQLRVQTSLVNATGELALSLVGLYRSLGGGW 470 >gi|154492891|ref|ZP_02032517.1| hypothetical protein PARMER_02530 [Parabacteroides merdae ATCC 43184] gi|154087196|gb|EDN86241.1| hypothetical protein PARMER_02530 [Parabacteroides merdae ATCC 43184] Length = 467 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 103/414 (24%), Positives = 204/414 (49%), Gaps = 16/414 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 +WW++FND +L+ L+++A++QN ++L A +RI AK N+ + P+ Sbjct: 52 QWWKNFNDPTLDSLIEVAVKQNYSVLMAVDRIAMAKANLRIQQGSYSPTLGLAAGWTRQQ 111 Query: 102 ASISHRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +S +P T S L +W+ID+FG R +++ N ++ + +++ ++ Sbjct: 112 SSGHTSNLPQTITQYSDAALSMNWEIDVFGSIRNRVKAQKENFAASKEDYNAVMVSLCAQ 171 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI+ R ++ + + + + ++++ ++ G SKL + + + ++ + Sbjct: 172 VASAYINLRELQQEVEVVKKNCLSQQAVVKITEKRYETGLVSKLDVAQALSVYYDTKASL 231 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 P LE + + L+G + M+ + P I IGIPA+L+ RPDIR Sbjct: 232 PMLEAGIIQYTNALGVLMGLYPWDVREIMETRKP--LPEYIETIGIGIPANLLLRRPDIR 289 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD-NSFPGYNT-HWSFGPKLYLPIFD 336 E+ + A +G +KSD +P + + GS+ +HD + +N+ + P + F Sbjct: 290 EAERLVNARAASLGASKSDWWPKVFVKGSVGFASHDLDKLVNHNSLTYEIAPAISWNFFQ 349 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 K+ R A++ E + + VL A++EV+NA+ K + L+ V K++ Sbjct: 350 GTKLAQATRLAKAQLDESIRQFNQDVLTAVQEVDNAMNFYKNSIKQIVALREVVNQGKQT 409 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS+ Y+QG ++LD +R+ E +L+ A+ S + LY A+GSG+ Sbjct: 410 LELSLDLYKQGLTPFQNVLDAQRSLLSYENELTQARGSSLLSLIQLYQALGSGW 463 >gi|293980659|ref|YP_003543417.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292677676|dbj|BAI99191.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 467 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 124/472 (26%), Positives = 208/472 (44%), Gaps = 34/472 (7%) Query: 4 LRAIFSLFIV-LLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDT 59 +R +F L + L C + P + +P +P PT ++ G+ + W E F D Sbjct: 1 MRRVFVLTLTSFLGACQLAPPHARPALPTTRDYPTSYA-GDGVLGRRAVEISWREFFADP 59 Query: 60 SLNKLVKIALQQN---------------LTILQATERINAAKENILSVRADLFPSSYASI 104 L L+ AL++N L +Q ER+ A N R+ P S I Sbjct: 60 QLETLIATALERNRDLAVAVAQIQEARGLYRIQGAERLPALGANGDVTRSRT-PGSAIGI 118 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPS 163 S G + +++D +G+ R++ + + A Q + A +L +I + + Sbjct: 119 PEVGAITDTRYSIGVGVTGFELDFWGRVRNLSDAARSQYLATVQAERAFRLALIRDVAST 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y +R ERI++A + ++ + ++ + G TS L + E+ + E+++ +L Sbjct: 179 YFASREADERIALAEATVRSRQEGLRIAERRLEAGVTSALDFRQAESLLTQAETELASLR 238 Query: 224 KSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ LLG P L + Q N I G+P++L+ RPDI Sbjct: 239 LAEAQSENFLAVLLGGPVPVGLTVPLTLADQKNG------TVIAAGLPSELMVTRPDILA 292 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E+KL + A IG A++ +PS+SL GSI N WSFGP + LPIFD Sbjct: 293 AEEKLRAARANIGAARAAFFPSISLTGSIGFASTDLGNLIGNEGLSWSFGPSISLPIFDW 352 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G K N+ AE+ ++ T+ A +EV +AL + V A + Sbjct: 353 GARKGNLSVAEAREDIAIAEYERTIQGAFREVADALAGRRWLAEQVAAQVRATAAQRAIA 412 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ YR+G + L++LD ER E L +R + V LY+A+G G Sbjct: 413 DLARTRYREGVANYLEVLDAERNLFIAEQTLIQLRRAELDALVSLYVALGGG 464 >gi|115361299|ref|YP_778436.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115286627|gb|ABI92102.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 591 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 116/460 (25%), Positives = 208/460 (45%), Gaps = 67/460 (14%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A + NL + A RI A+ + + A P+ A+ S+ Sbjct: 115 RWWRAFGDPLLDRLVERAARDNLDVQAAVLRIAQARAQVRAAAAQGLPNVRANASYQREQ 174 Query: 107 ---------------------------RFIPNLKTNSTGQ-------------------- 119 RF P T ++ Q Sbjct: 175 LGLKGIIEEQGIDQRVDRLGAPGSPLDRFGPG--TGASVQQGARAAIDSLEAPVNVWQAG 232 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +ES+ A +A A D A L++ +++ +Y+ R + + ++A Sbjct: 233 FDASWELDLFGRVRRSVESAGAQASAAVASRDDALLSLEAEVAQTYLQLRGAEAQRALAD 292 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + ++L+ + G S L + +A + I + +P ++ + + ++ L+G Sbjct: 293 DLQRAQRDLLDLTREQAAHGLASDLDVRSADARLAQIRAQLPQFDQQIVLLRNGLAYLVG 352 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ + P + + +G+P+ L R RPDIR E +L + A +G+A + Sbjct: 353 GAPGALDDWLD--APRALPGVPPTVPVGLPSTLARRRPDIRRAEAELHAATADVGVAVAQ 410 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + L H HWS FGP + LPIF G++ SN+R +++ Sbjct: 411 FYPDISLTGQVGLRAAHVREL----AHWSHLFYSFGPAVSLPIFSGGQLVSNLRLSQARQ 466 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E + ++ VL A+++V+NAL D+ L AV+ + ++ L+ YR+G Sbjct: 467 AEAALAYRRAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGALELARDRYRKGLSPF 526 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD ER ++ Q V LY A+G G+ Sbjct: 527 LDVLDAERQWSEGRQQAVQGALQTTTDLVALYKALGGGWQ 566 >gi|293605778|ref|ZP_06688152.1| outer membrane efflux protein [Achromobacter piechaudii ATCC 43553] gi|292815827|gb|EFF74934.1| outer membrane efflux protein [Achromobacter piechaudii ATCC 43553] Length = 477 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 225/469 (47%), Gaps = 37/469 (7%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNS-----KNLINIDTLK--WWESFNDTSLN 62 I+ LAGCT VGP+Y P + Q S G S + + + + WW +ND L+ Sbjct: 15 LIIALAGCTTVGPDYQVPDAAVAQRQ-SAGASFIEAREGVYQQEAVSGHWWRLYNDPVLD 73 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------- 108 LV AL N + A+ + A+ + +A PS + S F Sbjct: 74 GLVDKALSANTDLRVASANLERAQAAVQESQAQQQPSIGVNASPTFGHVSGLQELQPGID 133 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 PN + STG S +++DLFGQ RR IE++ ++ +A A D ++ V ++ +Y + Sbjct: 134 PPNRWSYSTGATVS-YQLDLFGQIRRAIEAANSDAQAAQAAYDATRVTVAAETARAYANM 192 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +++ A + + K++++ G + L + + ++++ +++++P + R Sbjct: 193 CAAGMQLASAQHSVQVQKESVDAVSRLQRAGRGTTLDVTRARSQLEQLQANLPPFQAQQR 252 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ ++ L G + + + + P L I +G A L+R RPDIR E+ LA Sbjct: 253 TALYRLAALTGQTPNDVPASLLQCAAA--PRLTSTIPVGDGAALLRRRPDIRQAERTLAA 310 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIR 345 S A+IG+A +DLYP ++L S A + G WS GP + + + G +++ I Sbjct: 311 STARIGVATADLYPKVTLGLSTASGGPAAMFGDRGTFSWSVGPLISWTLPNTGAVQARIA 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALT----SINEDKKIVTKLQHAVELHKKSMSLSM 401 AE+S + + TVLNA++E E+AL ++ D + + E ++ L Sbjct: 371 EAEASTKAALARFDATVLNALRETESALVVYARQLDRDAALRAARDQSAEAATQARRL-- 428 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ G+ L +LD ER A E L+ ++ +L+ + +++A+G G+ Sbjct: 429 --FQYGKTDYLTVLDAERTLASNESALAASQAELSSDQIAVFLALGGGW 475 >gi|52842722|ref|YP_096521.1| outer membrane efflux protein (RND multidrug efflux) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|19880978|gb|AAM00608.1| unknown [Legionella pneumophila] gi|52629833|gb|AAU28574.1| outer membrane efflux protein (RND multidrug efflux) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 520 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 112/470 (23%), Positives = 215/470 (45%), Gaps = 25/470 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ + L ++L+ C VGP + +P + + WW+ FND +L Sbjct: 4 MLKILALLSCLILSSCLVGPNFKEPKKDAANYWLTSSPAIKQSAFQNANWWKVFNDPTLT 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FI 109 L+ NL++ A R+ A+ + +L+P A + Sbjct: 64 SLIDNGYHNNLSLQMAGVRVLQARAQLAQSVGELYPQQQAMVGDYNYNRIGGNQLQGLLP 123 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T S G + W++D +G+ RR I+S+ A ++ A D A + + S + ++I R Sbjct: 124 PDFLTASLG-FSASWELDFWGKYRRAIQSNDALFLASLAAYDSALVTLTSDIASTFIKIR 182 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E I + + + +++++ ++ G TS L + + E+ +S +P + Sbjct: 183 TSEELIKVTKTNIQVQAMSLKIAKDRYYGGQTSLLDVEQAATELAETQSKLPQYVSDLQH 242 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG + ++K N P + +GIP ++I RPD+ + Sbjct: 243 QKDILAVLLGTTPDKVDDLLKK--NKGIPKALAVVEVGIPKEVIARRPDVYQARMEAIAQ 300 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKI 340 A IG K++LYPSLSL G+ +N F N + GP L + + G+I Sbjct: 301 SAAIGAVKANLYPSLSLVGTFVFASNNIGNSTISDIFNWSNRNIVAGPSLAWSLLNYGQI 360 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R +++ Q+ + + VL +EV++ +T E +K V+ L+ A +S L+ Sbjct: 361 TNAVRAQDAAFQQALLNYLNLVLKVQQEVQDNITRYVEGQKTVSSLKTANAAAIESTRLA 420 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y++G + +L+ E+ +V+ L A +LA S V LY ++G G+ Sbjct: 421 LVRYKEGEANYTTVLNAEQQQLRVQTSLVNATGELALSLVGLYRSLGGGW 470 >gi|207727491|ref|YP_002255885.1| drug efflux lipoprotein [Ralstonia solanacearum MolK2] gi|206590728|emb|CAQ56340.1| drug efflux lipoprotein [Ralstonia solanacearum MolK2] Length = 514 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 221/466 (47%), Gaps = 37/466 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ P +++ +N L W E F D L Sbjct: 22 VLSGCSLAPRYERPDAPVAGDYPQAPAGYAVPADTAKPGENAPRATDLGWREFFPDPRLQ 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTGQLD 121 KL+ +AL+ N + A I AA+ ADL P+ AS ++ R + + TGQ D Sbjct: 82 KLIGLALENNRDLRVAVLNIEAARAQYRLQIADLLPAVNASATYTRSLTPQSISQTGQ-D 140 Query: 122 ------------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S ++++LF S+ A+ + ++++IS++ +Y++ R Sbjct: 141 INTKQYQLGVGISSYQVNLFSVGDVTSSARASYLATEEGQRATQISLISQVAKAYLNERA 200 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + E++ +A Q L + +L+ +F GA+S L L + E ++S + L + + Sbjct: 201 YAEQLELAQQTLKGREDYYKLAKQRFDVGASSALDLRQNETLVESARVSVAQLTRQYAQA 260 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G P L S+ + I G+P+DL+ RPDIR E+KL + Sbjct: 261 TNALVLLVGAPLPADLPAPTTVSSE---KIVADIPPGLPSDLLIQRPDIRQAEQKLIAAN 317 Query: 290 AKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A++ +PS+ L ++ HD F WSF P LPIF+ G N+ Sbjct: 318 ANIGVARAAFFPSIGLTSNVGTASTALHD-LFKSGTGLWSFVPNATLPIFNWGTNLFNLD 376 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +++ + +++T+ A +EV +AL + ++ V + + + ++LS YR Sbjct: 377 LTKANQKIALANYEKTIQTAFQEVSDALVARGTLEEQVAAQKRFRDATAERLTLSDQRYR 436 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 437 NGVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 480 >gi|209544765|ref|YP_002276994.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209532442|gb|ACI52379.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 505 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 121/479 (25%), Positives = 224/479 (46%), Gaps = 50/479 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTS 60 L +LAGCTVGP Y M L P T I + N + WW F D Sbjct: 15 LAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIART----NAELKDWWHRFGDAE 70 Query: 61 LNKLVKIALQQNLTILQATERINAAK---------------------ENILSVRADLFPS 99 L++LV A+ N + A +RI A + ++ S+ D +P Sbjct: 71 LDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPL 130 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + ++R P S G + + W+ID+FG+ RR +E+S ++ + + ++S Sbjct: 131 RPGNPANR--PGASYLSYG-VSASWQIDVFGRIRRAVEASEHAVEENVEERRAVLMTMLS 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ Y+ R + R+ I+++ + + ++ +L+ + +G + L + + +AE+ + ++ Sbjct: 188 SLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAKAELDAQQAA 247 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 L H I L+G P T + + QP +P +P+ ++ NRP Sbjct: 248 REPLRTHIAQITHAIDVLMGQVPGT-----TEAELKVAQPLPQVPDFPATVPSIVLGNRP 302 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 DIR E+ A++ A+IG+A + +YP+ L+ N + + + F W F L Sbjct: 303 DIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMY-QVFEAGALSWQFFMLASL 361 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ GK+ IR A+++A+ +T+++TVL A +EVE+A+ + ++D + L A E Sbjct: 362 PLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRAAED 421 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Y G L++L ER E ++A+ + + +DLY A+G+G+ Sbjct: 422 SRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAGWQ 480 >gi|221209726|ref|ZP_03582707.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221170414|gb|EEE02880.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 491 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 213/465 (45%), Gaps = 41/465 (8%) Query: 20 VGPEYTKPHMPLLPTQFSI--------GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 VGP++ +P + +F+ G+ + +W F D +L+ L++ AL Sbjct: 21 VGPDFVRPDT-VTAARFARDAHPATQDGSPPDASADADAAFWRGFGDPALSALIEAALAA 79 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFI--------PNLKTN---STG 118 N + A R +A+ + R D +P+ AS I H+ P + + S+ Sbjct: 80 NQDLALAVSRYDASNALLSQARFDRYPTVTASGRIGHQLTSKDQAFGAPRSERDTPISSI 139 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++ W++DLFG+ RR IES A ++ A V ++ + +++ +Y+D R +ER+ IA Sbjct: 140 GINAGWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAAEVAATYVDLRGSQERLRIA 199 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 ++ + L + + G S+L + A+ ++ S I E + ++ H ++ L Sbjct: 200 RDNAANQQQTLALINARVAAGRGSELDAARARAQYEATTSRIAVYEAAIGVDEHRLAVLT 259 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G + P L ++ G P DL+R RPD+ E +L + A+IG+A + Sbjct: 260 GQRPDALAGRFDVPAGAPLPTLAADVDPGTPGDLLRRRPDVAAAEARLHAATARIGVATA 319 Query: 298 DLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGPKLYLPIFDKGKIKSNIRRA 347 DL+P +L+G + T F G +T+ WSF D G++++ I + Sbjct: 320 DLFPRFTLSGLLGSATSSYGFFRSGSDTNLIALGIDWSF--------LDVGRVRARIAAS 371 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ A Q ++ TVL A++E ENAL + + L A ++ L+ + G Sbjct: 372 DAEAAGQLAQYRLTVLGALEETENALLRVARTRDEAAHLTRAAADSARAAQLAQTRFSAG 431 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++LD +R + + + + + A S V LY A+ G+ P Sbjct: 432 AIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYKALAGGWPP 476 >gi|198276793|ref|ZP_03209324.1| hypothetical protein BACPLE_02996 [Bacteroides plebeius DSM 17135] gi|198270318|gb|EDY94588.1| hypothetical protein BACPLE_02996 [Bacteroides plebeius DSM 17135] Length = 460 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 114/462 (24%), Positives = 223/462 (48%), Gaps = 42/462 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+ GC +G +YT+P + L T S S + ++I W + + DT L +L++ L N Sbjct: 18 LLMGGCKIGKQYTRPQIDLPSTLDS--TSVDTVSIGDYPWEQLYTDTILQQLIQKTLDNN 75 Query: 73 LTILQATERIN--AAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------------ 118 +L A ++ AA + I A+LFP + +F + G Sbjct: 76 KDMLIAAAKVKELAAMKRI--DYANLFPQ----VGLKFYAEQEGEDHGGGHYKSDDQYDI 129 Query: 119 QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +L W+IDL+G R + S+A + K+++++++ SY + +SI Sbjct: 130 KLGVTWEIDLWGNLRWAKDKSMAEFMGSIENQRALKMSLVAQVAQSYFELVALDNELSIV 189 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + +D ++++ L+ +++ G TS+ + + + E+ + +P LEK + + I+ L Sbjct: 190 KKTVDARRESLHLARIRYEGGLTSETAFRQAQVELARTATLVPDLEKKITLKQNEIAFLA 249 Query: 238 GYPATEFLHYMQKQSNNFQPNLYI---PINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G E+ H +++ P I + +G+P+ L+ RPD+R E+ + + A +GI Sbjct: 250 G----EYPHDIKR---TVLPEDVIHAASLPVGLPSSLLERRPDVRQAEQAVIAANAAVGI 302 Query: 295 AKSDLYPSLSLNGSIA-----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A ++++P L+L S L+H P H+ + PIF GK ++ ++ ++ Sbjct: 303 AYTNMFPKLTLTASHGSENEELSHLFKSP----HYLLAGTILQPIFAMGKNRAMLKAKKA 358 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + ++ +++ VLNA K+ NA+ N+ K+I + K ++ L+ + Y G Sbjct: 359 ACEQAAYAYEKVVLNAFKDAYNAIAEYNKVKEIYETRLRLEQSSKITLDLAQLQYINGVI 418 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD +R ++ LS A R + V+LY A+G G+ Sbjct: 419 GYMDLLDAQRGYLDAQIGLSNAVRDKQITMVNLYKALGGGWQ 460 >gi|300705587|ref|YP_003747190.1| outer membrane protein (drug efflux lipoprotein) [Ralstonia solanacearum CFBP2957] gi|299073251|emb|CBJ44610.1| putative outer membrane protein (Probable drug efflux lipoprotein) [Ralstonia solanacearum CFBP2957] Length = 506 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 221/466 (47%), Gaps = 37/466 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ P +++ +N L W E F D L Sbjct: 14 VLSGCSLAPRYERPDAPVAGDYPQAPAGYAVPADTAKPGENAPRATDLGWREFFPDPRLQ 73 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTGQLD 121 KL+ +AL+ N + A I AA+ ADL P+ AS ++ R + + TGQ D Sbjct: 74 KLIGLALENNRDLRVAVLNIEAARAQYRLQIADLLPAVNASATYTRSLTPQSISQTGQ-D 132 Query: 122 ------------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S ++++LF S+ A+ + ++++IS++ +Y++ R Sbjct: 133 INTKQYQLGVGISSYQVNLFSVGDVRSSARASYLATEEGQRATQISLISQVAKAYLNERA 192 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + E++ +A Q L + +L+ +F GA+S L L + E ++S + L + + Sbjct: 193 YAEQLELAQQTLKGREDYYKLAQQRFDVGASSALDLRQNETLVESARVSVAQLTRQYAQA 252 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G P L S+ + I G+P+DL+ RPDIR E+KL + Sbjct: 253 TNALVLLVGAPLPADLPTPTTVSSE---KIVADIPPGLPSDLLIQRPDIRQAEQKLIAAN 309 Query: 290 AKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A++ +PS+ L ++ HD F WSF P LPIF+ G N+ Sbjct: 310 ANIGVARAAFFPSIGLTSNVGTASTALHD-LFKSGTGLWSFVPNATLPIFNWGTNIFNLD 368 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +++ + +++T+ A +EV +AL + ++ V + + + ++LS YR Sbjct: 369 LTKANQKIALANYEKTIQTAFQEVSDALVARGTLEEQVAAQKRFRDATAERLTLSDQRYR 428 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 429 NGVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 472 >gi|146282526|ref|YP_001172679.1| outer membrane lipoprotein precursor [Pseudomonas stutzeri A1501] gi|145570731|gb|ABP79837.1| probable outer membrane lipoprotein precursor [Pseudomonas stutzeri A1501] Length = 473 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 116/466 (24%), Positives = 223/466 (47%), Gaps = 41/466 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 LA CT+GP+Y +P +P+ K D L+ WW + D L+ LV Sbjct: 3 LAACTLGPDYQRPDLPVASEFKQAEGWKPATPADALQRGEWWRLYGDAELDALVARLNVS 62 Query: 72 NLTILQATERINAAKENILSVRADLFP---------------SSYASISHRFIPNLKTNS 116 N + A + A+ + R+ LFP S S S F + Sbjct: 63 NQNLAAAEAQFRQARALVRGARSQLFPILSGNAGVTRSAQGGSRSDSTSGSFASGVGETY 122 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L + W+ D++G+ RR++E++ AN+ ++ A + A+L++ ++L+ +Y+ R E Sbjct: 123 EAGLSASWEADIWGRLRRNLEANRANMQASAADLAAARLSLQAELVQTYLQLRVIDEHQR 182 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + Q ++ Y +++ L+ ++ G + + + + ++KS ++ L+ H I+ Sbjct: 183 LLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAIDLKWQRAQMEHAIAV 242 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G +E +++ +IP + + +P+ L+ RPDI E+++ + A Sbjct: 243 LVGVAPSELEIAVRE---------HIPALPDVPLAVPSQLLERRPDIASAERQVMAANAN 293 Query: 292 IGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ YP L+L+ S + + F N WS GP+L L + D G ++ + RAE Sbjct: 294 IGVAEAAWYPDLTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGSRRAELERAE 353 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +S + +++TVL++ +EVEN L + E + +V + A+E ++S+ L YR Sbjct: 354 ASYDQTVANYRQTVLDSFREVENYLVQLRVLEQEAVVQR--EALEAAQESLRLIENQYRA 411 Query: 407 GRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L + ++ A +L++ +L S V L A+G G++ Sbjct: 412 GTVDFLSVATVQTTALNNQRTNLTLLGDRLTAS-VLLIAALGGGWD 456 >gi|119503129|ref|ZP_01625213.1| RND efflux system, outer membrane lipoprotein, NodT [marine gamma proteobacterium HTCC2080] gi|119460775|gb|EAW41866.1| RND efflux system, outer membrane lipoprotein, NodT [marine gamma proteobacterium HTCC2080] Length = 519 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 126/476 (26%), Positives = 239/476 (50%), Gaps = 40/476 (8%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPT-QFSI-GNSKNLIN---IDTLKWWESFNDT 59 ++ ++++++L GCT VGP+Y P L + S+ G S ++ + WW FND Sbjct: 8 SVAAIWVLILVGCTTVGPDYVPPDDSWLDALEISVYGESITVVTESESEATLWWRQFNDP 67 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPN 111 LN L++ A +N T+ A R+ A+ + + L+P ++YA S + Sbjct: 68 VLNALIEEAKTENPTLRIAGLRVLEARALAAAAGSALYPQAQTLDASAAYAKRSSGPGES 127 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ W++D +G+ +R IES+ A ++ A A++ + + + Y R Sbjct: 128 GFSSWDAGFTLGWELDFWGRFQRGIESADAAYFASLANQRDAQVLLAATVADIYWQYRVT 187 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +ERI I ++ +L ++ +++ F G S+L L + + + + +P+LE+ Sbjct: 188 EERIVILNKNAELQSRSYDITRQMFEAGQQSELDLQQARTQYLATLAVLPSLEQGAGQLA 247 Query: 231 HNISTLLGYPATEFLHYMQKQ-SNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKK 284 + +S LLG E MQK+ S + + IP + +PA LI+ RPD+R Sbjct: 248 NALSALLGRAPAE----MQKRLSGSAAKPVPIPSSHRVELTVLPATLIQRRPDVRASLWT 303 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKS 342 +A A+IG+A++D YPS+++ GSI + NS ++ GP + +FD G+I + Sbjct: 304 VAAQSAQIGLAQADYYPSIAIGGSIGWSG-NSLTSQDSSGLLGVGPAVRWTVFDWGRIAN 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 NIR ++ Q+ ++ TVLNA +E+ +A ++++ ++ L VE ++++ ++ Sbjct: 363 NIRIQDARLQQTIEVYRNTVLNAAREINDASIALDKTEEQRVLLGKTVEAAERALEIAST 422 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA------KSYVDLYIAIGSGYNP 452 YR+G +LD +R V + A R+L ++ V +Y A+G G++P Sbjct: 423 RYREGYADFQRVLDAQR------VVFTQADRKLQNDGQHLRAIVAMYKALGGGWSP 472 >gi|163858830|ref|YP_001633128.1| putative outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163262558|emb|CAP44861.1| putative outer membrane efflux protein [Bordetella petrii] Length = 492 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 121/470 (25%), Positives = 223/470 (47%), Gaps = 50/470 (10%) Query: 20 VGPEYTKPHM-------PLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQ 70 VGPEY +P + LP + + L+ WW+ F D +LN L A Q Sbjct: 25 VGPEYQRPEVDTPAAYKEALPAHEAGSWQTAQPAEEALRGEWWKLFGDDTLNALETQAQQ 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---NLKTNST------- 117 N ++ A R+ A+ + + R++ FP+ + R P L N + Sbjct: 85 ANHSLQAAAARLKQARALLGNARSEQFPTVDAGFGPTRQRPSPASQGLSANDSTDPSTLW 144 Query: 118 -GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 Q+ +++DLFG+ ++++ A++ + A L + + + +Y R + Sbjct: 145 RAQVGVSYEVDLFGRVASTVDAATADVQQSEALYRSVLLALQADVAQAYFQVRELDAGLQ 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + Q ++L + ++L ++ G S+L L + +E++S S+ E+ H ++ Sbjct: 205 LYRQTVELRAETLQLIQRRYDAGDISELDLARARSELESARSEALGFERRRANAEHALAV 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG +EF S QP I +N+ G+P+ L+ RPDI E+ +A + A++G Sbjct: 265 LLGKAPSEF-------SLPAQPLSRIAVNVPAGLPSTLLERRPDIAAAERAMAAANARVG 317 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDKGKIKSNI 344 +AKS +PSL++ G+ +++ G WS G L LPIFD G+ ++ + Sbjct: 318 VAKSAFFPSLNITGAAGF--ESAELGDLFEWSSRTFLLGPLVGAALSLPIFDGGRRQAGL 375 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA + +E +++TVL A +EVE+ L ++ A++ +++ +S Y Sbjct: 376 DRARAVYEEDVANYRQTVLTAFREVEDNLANLRILSSQTEAQDAALQASQRAARISHTQY 435 Query: 405 RQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+G S LD+++ +R A +V V L + A+S V+L A+G G++ Sbjct: 436 REGSISYLDVIEADRTVLAQQRVSVQLDGER---ARSAVNLVRALGGGWD 482 >gi|331681988|ref|ZP_08382612.1| cation efflux system protein CusC [Escherichia coli H299] gi|331080667|gb|EGI51841.1| cation efflux system protein CusC [Escherichia coli H299] Length = 460 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------T 117 + AL N + AT ++ A+ AD +P S + NLK +S T Sbjct: 67 ISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSNNLKGDSASTREFST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|170701622|ref|ZP_02892567.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170133476|gb|EDT01859.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 485 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/457 (23%), Positives = 213/457 (46%), Gaps = 28/457 (6%) Query: 17 GCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC++ P Y +P P+ TQ +G ++ W F D +L + A Sbjct: 24 GCSLAPRYERPAAPVPASYATVDGDTQQGVGPAEAADAALLDDWRAYFTDPALQAWIDAA 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQL---- 120 L N + A R++ A+ RADL PS A++ + ++ P ++ ++ L Sbjct: 84 LANNRDLRIAAGRLDEARALYGVQRADLMPSVDANLGYERTRQYDPVVRESAVSGLYRAG 143 Query: 121 --DSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E++++ Sbjct: 144 VGVSAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLHEQLAL 202 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + LD ++ L+ ++ G + + L E + S + L++ +V + L Sbjct: 203 AQRTLDARERIAALTQRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQSVRALQLL 262 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G +F + P+ G P+ L+ RPDIR E +L + A+IG A+ Sbjct: 263 AG----DFARSVPADGTVLDTLAIAPVAPGAPSALLERRPDIRQAESRLKAANAQIGAAR 318 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P ++L GS++ F + W+F P++ LPIF G+ ++N+ A + Sbjct: 319 AAFFPRVALTTDYGSVSDAFSTLFAAGTSVWTFAPRITLPIFAGGRNRANLDVANARKHI 378 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TV A +EV +A + + + + Q + L+ Y G + L+ Sbjct: 379 AVAEYEKTVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVATYLE 438 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +R+T + +L K + + LY A+G G+ Sbjct: 439 LLDAQRSTYESGHELIRLKALRLANAIALYRALGGGW 475 >gi|327480783|gb|AEA84093.1| outer membrane lipoprotein precursor [Pseudomonas stutzeri DSM 4166] Length = 497 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 118/480 (24%), Positives = 229/480 (47%), Gaps = 42/480 (8%) Query: 2 NILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFN 57 ++LR + + L LA CT+GP+Y +P +P+ K D L+ WW + Sbjct: 13 HVLRPLAVAMLTLSLAACTLGPDYQRPDLPVASEFKQAEGWKPATPADALQRGEWWRLYG 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------------SSYA 102 D L+ LV N + + A+ + R+ LFP S Sbjct: 73 DAELDALVARLNVSNQNLAATEAQFRQARALVRGARSQLFPILSGNAGVTRSAQGGSRSD 132 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 S S F + L + W+ D++G+ RR++E++ AN+ ++ A + A+L++ ++L+ Sbjct: 133 STSGSFASGVGETYEAGLSASWEADIWGRLRRNLEANRANMQASAADLAAARLSLQAELV 192 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R E + Q ++ Y +++ L+ ++ G + + + + ++KS ++ Sbjct: 193 QTYLQLRVIDEHQRLLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAID 252 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPD 277 L+ H I+ L+G +E +++ +IP + + +P+ L+ RPD Sbjct: 253 LKWQRAQMEHAIAVLVGVAPSELEIAVRE---------HIPALPDVPLAVPSQLLERRPD 303 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 I E+++ + A IG+A++ YP L+L+ S + + F N WS GP+L L + Sbjct: 304 IASAERQVMAANANIGVAEAAWYPDLTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTL 363 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVEL 392 D G ++ + RAE+S + +++TVL++ +EVEN L + E + +V + A+E Sbjct: 364 LDFGSRRAELERAEASYDQTVANYRQTVLDSFREVENYLVQLRVLEQEAVVQR--EALEA 421 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S+ L YR G L + ++ A +L++ +L S V L A+G G++ Sbjct: 422 AQESLRLIENQYRAGTVDFLSVATVQTTALNNQRTNLTLLGDRLTAS-VLLIAALGGGWD 480 >gi|330819635|ref|YP_004348497.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] gi|327371630|gb|AEA62985.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] Length = 522 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 125/488 (25%), Positives = 233/488 (47%), Gaps = 51/488 (10%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---K 51 L + +L LLA C VGP+Y +P + P L G K D + Sbjct: 25 LAGLSALMSALLAACAVGPDYKRPDVATPAAFKEAPTLAAGEQAGTWKPAEPADAAHRGE 84 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW F D L+KL + AL N + A R+ A+ + R+ FPS A Sbjct: 85 WWTVFGDPVLDKLEQQALDANQNLKAAAARVEEARAATRAARSAWFPSLDAGFGPTREGA 144 Query: 103 SISHRFIP--NLKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +F+P + N+T Q ++ DLFG+ R++E+S A+ + A +L + Sbjct: 145 SSASQFLPQGSGPVNATLWRAQGTVSYEADLFGRVGRNVEASRADAAQSEALFRSVQLAL 204 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y + R + + +DL +++++L+ +F +G ++L + + + E+ + + Sbjct: 205 QADVAQNYFELRQLDADQGLYRRTVDLRQESLKLAQRRFDEGDINELDVSRAKNELATAQ 264 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLI 272 +D + + + H ++ LLG P +F +F+ +P+ + G+P+ L+ Sbjct: 265 ADAVGVARRRAASEHALAILLGKPPADF---------SFRETPIVPVAVRIPGGLPSALL 315 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FG 327 RPD+ E+ +A + A+IG+AKS +P L + GS ++ + G WS G Sbjct: 316 ERRPDVSAAERAMAAANARIGLAKSAYFPKLDITGSFG--YEANALGSLFMWSSRTFLLG 373 Query: 328 P----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P L LPIFD G+ + +++A + EQ +++ VL A +EVE+ L + + Sbjct: 374 PFAGTALSLPIFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQI 433 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 AV +++ LS Y++G+ + +D++D ER+ + ++ + A S V+L Sbjct: 434 RAQGDAVSASQRAAKLSRTQYQEGQIAYIDVIDSERSVLQSQLQANQLTGAQAVSTVNLI 493 Query: 444 IAIGSGYN 451 A+G G+ Sbjct: 494 RALGGGWG 501 >gi|115361317|ref|YP_778454.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115286645|gb|ABI92120.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 486 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 32/430 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P +F ++ + D WW F D L + V +AL QN Sbjct: 18 GCAVGPDYVRPEVAM-PQRFQGQAAVDQRHAAADADLATWWTGFGDPQLTRYVTLALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T NS D Sbjct: 77 LDLAQAAARVAQARAGLSAANAALLPSGEVSGQAARVYQSVETPLGRVLNSAPGFDRHGS 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 137 DYEADFNASWELDVFGGLRRGREAALADYQASEAGAVATRLAVAAQTADIYITIRGLQGR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + L + +G ++L + + E + + + +P LE + ++ + Sbjct: 197 LKVARHQVQTEQDLLSTISLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDTAMNAL 256 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A + A+I Sbjct: 257 DVMLGSQPGTHRAELLDGGDVPVAPRI---AATGTPGELLRRRPDLIVAERRVAAANARI 313 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL+G I + N F G + L +FD G+I + I +A+ Sbjct: 314 GMAVAEYYPKFSLSGLIGSATTMGAGNLFTGGANQAAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 374 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAVLGGGVDSLGRARAASFAAYQKGV 433 Query: 409 YSLLDILDIE 418 SL+++L + Sbjct: 434 VSLIEVLQAD 443 >gi|299068425|emb|CBJ39649.1| putative outer membrane protein (Probable drug efflux lipoprotein) [Ralstonia solanacearum CMR15] Length = 506 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 218/465 (46%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ PT + + + L W E F D L Sbjct: 14 VLSGCSLAPRYERPAAPVAGDYPQAPTGYGVPADTAKPGETAPRATDLGWREFFPDPRLQ 73 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP---------- 110 +L+ ++L+ N + A I AA+ ADL P ++ A+ + P Sbjct: 74 RLIGLSLENNRDLRVAILNIEAARAQYRQQIADLLPPVNATATYTRSLTPQSISQTGQEI 133 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N K G S+++++LF S+ A+ + ++++IS++ +Y++ R + Sbjct: 134 NTKQYQLGVGISNYQVNLFSVGDVTSSARASYLATEEGQRATQISLISQVAKAYLNERAY 193 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ +A Q L + +L+ +F GA+S L L + E ++S + L + + Sbjct: 194 AEQLELAQQTLKGREDYYKLAKQRFDVGASSALDLRQNETLVESARVSVAQLTRQYAQAT 253 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P L S+ + I G+P++L+ RPDIR E+KL + A Sbjct: 254 NALVLLVGSPLPADLPPPTTVSSE---KIVADIPPGLPSELLEQRPDIRQAEQKLVAANA 310 Query: 291 KIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +PSL L ++ HD F WSF P L LPIF+ G N+ Sbjct: 311 NIGVARAAFFPSLGLTSNVGTASTALHD-LFKSGTGLWSFVPNLTLPIFNWGTNVFNLDL 369 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + +++T+ A +EV +AL + + V + + + ++LS YR Sbjct: 370 TKANQKIAVANYEKTIQTAFQEVSDALVARGTLDEQVAAQKRFRDATAERLTLSDQRYRN 429 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 430 GVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 472 >gi|293606558|ref|ZP_06688915.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] gi|292815034|gb|EFF74158.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] Length = 509 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 114/453 (25%), Positives = 211/453 (46%), Gaps = 23/453 (5%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 + GC ++ P Y +P +P+ T ++ IN + W F D L L+ AL N Sbjct: 29 MQGCVSMAPTYERPALPVASTYSEPSQAEAGINAARVGWRSYFTDPVLQGLITEALANNR 88 Query: 74 TILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLD---------- 121 + QA R+ A+ RAD FP+ A + P N TGQ Sbjct: 89 DLRQALLRVEEARALYGIQRADQFPTIGVQAEGARSRTPG-DLNLTGQPMVGSQYQAGVG 147 Query: 122 -SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W++D +G+ R + +++L N ++ A A L++I+++ SY+ R ER+++ + Sbjct: 148 MASWELDFWGRVRSLKDAALENYLASDAAARAATLSLIAQVADSYLTLRELDERLALTRE 207 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + +++ + ++ G+ SKL L ++E + + LE++ H + L+G Sbjct: 208 TIASRGESLRIFRRRYEVGSISKLDLTQVETLWQQARALGAELEQARATQAHALEQLVGK 267 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P L ++ + + + G+P+DL+ RPDI E +L + A IG A++ Sbjct: 268 P----LDLPLPKAGLDDDAVMLDLPAGLPSDLLTQRPDIVAAEHQLRAANANIGAARAAF 323 Query: 300 YPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P ++L G+ + F + WSF P L LPIFD G+ + + A+ + Sbjct: 324 FPRITLTGAFGTASAELNGLFGSGSGAWSFAPSLDLPIFDAGRRSATLDLADVRRDQAVA 383 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +A K+V +AL + + + V L+ V + L+ + Y G L++LD Sbjct: 384 RYEQSIQSAFKDVSDALAARHWLAEQVQVLRATVAAQSERARLAKLRYDHGASPYLEVLD 443 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R + L +R L + V LY A+G G Sbjct: 444 AQRDLLTAQQALVQTRRALLSARVGLYAALGGG 476 >gi|254242183|ref|ZP_04935505.1| hypothetical protein PA2G_02915 [Pseudomonas aeruginosa 2192] gi|126195561|gb|EAZ59624.1| hypothetical protein PA2G_02915 [Pseudomonas aeruginosa 2192] Length = 491 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 220/467 (47%), Gaps = 41/467 (8%) Query: 12 IVLLAGCT-VGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++LL GC VGP+Y P +P G + ++WW F++ +L L Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGGGVE-------VEWWRGFDEPALESL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST----- 117 ++ AL NL I A R++ AK + R + P + + R ++T + Sbjct: 65 IQRALAANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDI 124 Query: 118 ----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + + Sbjct: 125 ETYRGALDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLQGIEA 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ H I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + Sbjct: 185 ELAVVHDIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LL F + + S L + + +G PA L+ R DI E+ LA + A+ Sbjct: 245 LAVLLAEAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATAR 301 Query: 292 IGIAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG+ + LYP + + GSI L D S +N P + + D+G++++ I Sbjct: 302 IGVETAGLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRARIA 358 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINY 404 +E+ AQE I + TVL A++E ++A ++ +L A ++++ L+ + Sbjct: 359 ASEARAQEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERF 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 QG LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 418 VQGDGEYLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|238023533|ref|YP_002907765.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237878198|gb|ACR30530.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 565 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 118/465 (25%), Positives = 220/465 (47%), Gaps = 56/465 (12%) Query: 40 NSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 +SK +++ D +WW++F+D L++LV A NL + A RI A+E + A P Sbjct: 91 DSKPVVDADPDPRWWQAFHDPLLDRLVARAAHDNLDLQTAVLRIAEAREQLHQAAAQGLP 150 Query: 99 SSYAS------------------ISHRF-------------IPN----LKTNSTGQLDS- 122 + A+ +S R +P ++ ++ LD+ Sbjct: 151 NVRATASYQREQLGVKGILEDEGVSDRIDRLGAPGSALAGAVPGGSAAIRQGASRALDAI 210 Query: 123 -------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 W++DLFG+ RR +E++ A +A A D A L++ +++ +Y+ R Sbjct: 211 SSPTNLWQAGFDASWELDLFGRVRRSVEAAGAEAGAAVAGRDDALLSLEAEVAQTYLQYR 270 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++A ++ + +L+ + G TS+L + EA++ +I + +P ++ Sbjct: 271 GAQALRALAVELAQSQGELADLTRNRAAHGLTSQLDVRSAEAQLATIRAQLPQYDQQLAT 330 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ L+G + + P L + +G+P+ L R RPD+R E +L + Sbjct: 331 LRNGLAYLVGEAPGALDAELD--APGALPALPPTVPVGLPSTLARRRPDVRRAELELHAA 388 Query: 289 VAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIR 345 A++G+A + YP +SL G I L TH ++ +S GP + LPIF G + SN+R Sbjct: 389 TAQVGVAVAQFYPDVSLTGRIGLRSTHVRELAQWSHLFYSAGPAISLPIFSGGALVSNLR 448 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ +E + ++ VL A+++V+NAL D+ +L AV + ++ L+ +YR Sbjct: 449 LSKVQQREAALAYRGAVLVALRDVDNALAVYRTDQTRRAELDDAVRAERGALDLARDSYR 508 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G LD+LD ER ++ + Q V LY A+G G+ Sbjct: 509 KGLVPFLDVLDAERQWSQARQQAVQGELQTTTDLVALYKALGGGW 553 >gi|167763442|ref|ZP_02435569.1| hypothetical protein BACSTE_01816 [Bacteroides stercoris ATCC 43183] gi|167698736|gb|EDS15315.1| hypothetical protein BACSTE_01816 [Bacteroides stercoris ATCC 43183] Length = 466 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 119/453 (26%), Positives = 231/453 (50%), Gaps = 27/453 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 VL A C VG Y +P M L P S+ ++ I+I +W + D +L L+ AL+ N Sbjct: 22 VLFASCKVGKSYVRPEMAL-PD--SLMQQQDSISIADEQWQAVYTDNTLRNLIARALEYN 78 Query: 73 LTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS-------D 123 +L A R+ A + +SV A+L P I + R + N +S +S Sbjct: 79 KDMLVAAARVKEMAAQKRISV-ANLLPQLNGKIEAEREVENYGGHSRDVGNSYEAKALLS 137 Query: 124 WKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DL+G R + + L S +Q + ++ +++++ +Y + + I Q Sbjct: 138 WELDLWGNLRWKKVAAVADYLQSVESQRAL-RMTIVAEVAQAYYELVALDTELEIVRQTQ 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G Sbjct: 197 KAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERKISIKENDIAFLAG--- 253 Query: 242 TEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 EF +++ + F L +P + +G+P+ L+ RPDIR E++L A++ +A +++ Sbjct: 254 -EFPTRIER--SRFLEELDVPESLPVGLPSGLLERRPDIRAAEQQLIAEHARVKVAYTNM 310 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +P LSL G L D + +S + P+F+ GK ++ ++ ++S + + ++ Sbjct: 311 FPRLSLTGQFGLESDVLSNFLQSPYSLLNGAVLTPLFNWGKNRAALKAQKASFEAEVHSY 370 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDILDI 417 ++TVLNA KE +NA+ N+ K+ V +L+ +E K+ + L+ + Y G + +D+LD Sbjct: 371 EKTVLNAFKEAKNAIVDFNKIKE-VYQLRLKLERSAKTYVDLAQLQYINGVINYMDVLDA 429 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R ++ +S A R + V++Y A+G G+ Sbjct: 430 QRGYFDAQIGVSNAIRDELIAVVNVYKALGGGW 462 >gi|170682284|ref|YP_001742688.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli SMS-3-5] gi|170520002|gb|ACB18180.1| cation efflux system protein CusC [Escherichia coli SMS-3-5] Length = 460 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + A ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + K ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLKITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|162149524|ref|YP_001603985.1| outer membrane protein oprM [Gluconacetobacter diazotrophicus PAl 5] gi|161788101|emb|CAP57705.1| putative Outer membrane protein oprM [Gluconacetobacter diazotrophicus PAl 5] Length = 511 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 121/479 (25%), Positives = 223/479 (46%), Gaps = 50/479 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTS 60 L +LAGCTVGP Y M L P T I + N + WW F D Sbjct: 21 LAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIART----NAELKDWWHRFGDAE 76 Query: 61 LNKLVKIALQQNLTILQATERINAAK---------------------ENILSVRADLFPS 99 L++LV A+ N + A +RI A + + S+ D +P Sbjct: 77 LDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDARYSINVDNWPL 136 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + ++R P S G + + W+ID+FG+ RR +E+S ++ + + ++S Sbjct: 137 RPGNPANR--PGASYLSYG-VSASWQIDVFGRIRRAVEASEHAVEENVEERRAVLMTMLS 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ Y+ R + R+ I+++ + + ++ +L+ + +G + L + + +AE+ + ++ Sbjct: 194 SLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAKAELDAQQAA 253 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 L H I L+G P T + + QP +P +P+ ++ NRP Sbjct: 254 REPLRTHIAQITHAIDVLMGQVPGT-----TEAELKVAQPLPQVPEFPATVPSIVLGNRP 308 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 DIR E+ A++ A+IG+A + +YP+ L+ N + + + F W F L Sbjct: 309 DIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMY-QVFEAGALSWQFFMLASL 367 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ GK+ IR A+++A+ +T+++TVL A +EVE+A+ + ++D + L A E Sbjct: 368 PLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRAAED 427 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Y G L++L ER E ++A+ + + +DLY A+G+G+ Sbjct: 428 SRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAGWQ 486 >gi|167572148|ref|ZP_02365022.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 510 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 122/484 (25%), Positives = 225/484 (46%), Gaps = 47/484 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWW 53 A L + LLA C VGP+Y +P + P L G K D +WW Sbjct: 18 AASGLLVTLLAACAVGPDYKRPDVATPAAFKEAPALSPGEQAGTWKTAEPADAAHRGEWW 77 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASI 104 +F D L+ L + AL N + A R+ A+ + R+ FP S Sbjct: 78 RAFGDPVLDALEEQALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSS 137 Query: 105 SHRFIPNLK--TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + +F P TN+T Q ++ DLFG+ R++E+S A+ + A +L + + Sbjct: 138 ASQFQPQGAGPTNATLWRAQGTVSYEADLFGRVSRNVEASRADAAQSEALFRSVQLALQA 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y + R + + ++L ++ ++L +F++G S+L + + + E+ + ++D Sbjct: 198 DVAQNYFELRRLDSDQDLYRRTVELREQALKLVQRRFSEGDISELDVSRAKNELATAQAD 257 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRN 274 + + ++ H ++ LLG +F +F+ P+ + G+P+ L+ Sbjct: 258 AVGVARRRAVSEHALAILLGKAPADF---------SFKETPIAPVAVRVPAGLPSALLER 308 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP--- 328 RPDI E+ + + A++G+AKS +P L + G+ A T N F + + GP Sbjct: 309 RPDIAAAERAMMAANARVGLAKSAYFPKLDITGAFGFEAATLGNLFLWSSRTFLLGPFAG 368 Query: 329 -KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G+ + + +A + E+ +++ VL A +EVE+ L + + Sbjct: 369 TALTLPIFDGGRRSAGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQN 428 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 AV +++ +LS Y++G S LD++D ER+ + ++ + A S V+L A+G Sbjct: 429 DAVNASRRAATLSRTQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAASTVNLIRALG 488 Query: 448 SGYN 451 G+ Sbjct: 489 GGWG 492 >gi|329904596|ref|ZP_08273884.1| outer membrane transport protein involved in copper (silver) tolerance [Oxalobacteraceae bacterium IMCC9480] gi|327547897|gb|EGF32649.1| outer membrane transport protein involved in copper (silver) tolerance [Oxalobacteraceae bacterium IMCC9480] Length = 448 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 44/457 (9%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 + P Y +P P+ T F+ GN+ + L W F D L L+ AL N + A Sbjct: 1 MAPLYVQPAAPVAAT-FA-GNADGTVTAADLGWRTFFPDQRLQALITAALIDNRDLRTAA 58 Query: 80 ERINAAKE--NILSVRADLFPS--SYASISHRFIPNL-------KTNSTGQLD---SDWK 125 RI A+ N+ S ADL P+ AS + +P T + Q+ + ++ Sbjct: 59 LRIEEARALYNVQS--ADLLPNINGTASGARARVPGSLSMTGRPTTGGSYQIGLGLASFE 116 Query: 126 IDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +D FG+ R + +++LA L ++ A++ + +++++S++ +Y+ R F E++ +A Q L+ Sbjct: 117 LDFFGRVRSLNDAALAQYLATSEARLSV-QISLVSEVAKAYLAERGFDEQLMLARQTLEG 175 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + +L+ ++ GA+S+L L E +++ TL++ R N TLL AT Sbjct: 176 RLQAYQLAQQRYDVGASSELDLRLSETLVQTARVSQLTLQRQ-RAQASNALTLLVGRATT 234 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L S+ N+ I G+P+DL+ RPDIR E++L + A IG A++ +P + Sbjct: 235 DLPAAPLLSDE---NIITTIAAGLPSDLLMRRPDIRAAEQRLKSANANIGAARAAFFPRI 291 Query: 304 SLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 SL + A + N+ G + WSF P+L LPIFD G+ +SN+ A+ + ++ Sbjct: 292 SLTAA-AGSSSNALSGLFDAGSGSWSFAPQLVLPIFDAGRNRSNLTLAQVRTDLAVVDYE 350 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + A +EV +AL + ++ V Q V +L+ + G S LD++D +R Sbjct: 351 KVIQIAFREVSDALVARGLLEEQVLAQQAVVNAQTVRQTLAQQRFDNGISSALDVVDAQR 410 Query: 420 ATAKVEVDLSIAKRQLAK-------SYVDLYIAIGSG 449 +L IA++ L + + VDLY ++G G Sbjct: 411 -------ELFIAQQALVQIRQLRLTNAVDLYRSLGGG 440 >gi|300312485|ref|YP_003776577.1| outer membrane protein [Herbaspirillum seropedicae SmR1] gi|300075270|gb|ADJ64669.1| outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 491 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 215/466 (46%), Gaps = 44/466 (9%) Query: 21 GPEYTKP--HMPLLP--TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GP+Y P P QF G +WW+ D L L++ ALQ N + Sbjct: 31 GPDYAGPPEAAPQAAHGGQFVRGGDSATTTAPINQWWQGLGDAQLTSLIERALQANPNLG 90 Query: 77 QATERINAAKENILSVRADLFPSSYASI--SHRFIP--NLKTNSTGQ------------- 119 A R+ ++ + +A+ PS AS H +P NL + G Sbjct: 91 IARARLQQSRAGLALEQANAAPSVGASALAGHARLPPANLGALTGGASSGNGSPTSANLY 150 Query: 120 ---LDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVISKLIPSYIDARHFKERI 174 D+ W+IDLFG RR + A D+ ++++ +++ +YI R ++R+ Sbjct: 151 SLGFDASWEIDLFGGRRRAVQAATATADAAQASLADV-QVSLAAEVANAYISLRDRQQRL 209 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ Q + ++ ++L+ + +G S L ++++ ++ + +D+ L+ ++ ++ Sbjct: 210 ALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQADRDAYLNQLA 269 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIP-----INIGIPADLIRNRPDIRYQEKKLADS 288 TLLG P T + +P + +G P L+R RPD+R E+ LA Sbjct: 270 TLLGQEPGT--------LDGELAATVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTLAAD 321 Query: 289 VAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFG-PKLYLPIFDKGKIKSNIR 345 AKIG A++ YPSL L G I L TH + + + G P L D G+ K+ + Sbjct: 322 TAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKARVT 381 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +AE E + ++++VL A+++ E+AL+ + V + ++++L+ Y+ Sbjct: 382 QAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKLSADRALALARQRYQ 441 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +L+++LD R + +L A+ L +S+V + A+G G++ Sbjct: 442 AGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGWS 487 >gi|107103033|ref|ZP_01366951.1| hypothetical protein PaerPA_01004102 [Pseudomonas aeruginosa PACS2] gi|254236447|ref|ZP_04929770.1| hypothetical protein PACG_02432 [Pseudomonas aeruginosa C3719] gi|126168378|gb|EAZ53889.1| hypothetical protein PACG_02432 [Pseudomonas aeruginosa C3719] Length = 491 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 219/467 (46%), Gaps = 41/467 (8%) Query: 12 IVLLAGCT-VGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++LL GC VGP+Y P +P G + ++WW F++ L L Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGGGVE-------IEWWRGFDEPDLESL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST----- 117 ++ AL NL I A R++ AK + R + P + + R ++T + Sbjct: 65 IQRALAANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDI 124 Query: 118 ----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + + Sbjct: 125 ETYRGALDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLQGIEA 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ H I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + Sbjct: 185 ELAVVHDIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LL F + + S L + + +G PA L+ R DI E+ LA + A+ Sbjct: 245 LAVLLAEAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATAR 301 Query: 292 IGIAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG+ + LYP + + GSI L D S +N P + + D+G++++ I Sbjct: 302 IGVETAGLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRARIA 358 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINY 404 +E+ AQE I + TVL A++E ++A ++ +L A ++++ L+ + Sbjct: 359 ASEARAQEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERF 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 QG LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 418 VQGDGEYLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|221196022|ref|ZP_03569069.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221202696|ref|ZP_03575715.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221176630|gb|EEE09058.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221182576|gb|EEE14976.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 491 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 212/465 (45%), Gaps = 41/465 (8%) Query: 20 VGPEYTKPHMPLLPTQFSI--------GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 VGP++ +P + +F+ G+ + +W F D +L+ L+ A Sbjct: 21 VGPDFVRPDT-VTAARFARDAHPATQDGSPPDASADADAAFWRGFGDPALSALIDAAFAA 79 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFI--------PNLKTN---STG 118 N + A R +A+ + R D +P+ AS I H+ P + + S+ Sbjct: 80 NQDLALAVSRYDASTALLSQARFDRYPTVTASGRIGHQLTSKDQAFGAPRSERDTPISSV 139 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++ W++DLFG+ RR IES A ++ A V ++ + +++ +Y+D R +ER+ IA Sbjct: 140 GINAGWELDLFGRVRRSIESQRAETTASAADVRAVRVAIAAEVAATYVDLRGSQERLRIA 199 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 D ++ + L + G S L + A+ ++ S I E + ++ H ++ L Sbjct: 200 RDNADNQRQTLALIDARVRAGRGSDLDAARARAQYEATTSRIAVYEAAIGVDEHRLAVLT 259 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G + + P L ++ G P DL+R RPD+ E +L + A+IG+A + Sbjct: 260 GQRPDALIGRFDAPAGAPLPALAADVDPGTPGDLLRRRPDVAAAEARLHAATARIGVATA 319 Query: 298 DLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGPKLYLPIFDKGKIKSNIRRA 347 DL+P +L+G + T F G +T+ WSF D G++++ I + Sbjct: 320 DLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDWSF--------LDVGRVRARIAAS 371 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ A Q +++TVL A++E ENAL + + L A ++ L+ + G Sbjct: 372 DAEAAGQLAQYRQTVLGALEETENALLRVARTRDETAHLTRAAADSARAAQLAQTRFSAG 431 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++LD +R + + + + + A S V LY A+ G+ P Sbjct: 432 AIDYYEVLDAQRTLLQAQDAAADGRMRSAASTVALYKALAGGWPP 476 >gi|83310973|ref|YP_421237.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] gi|82945814|dbj|BAE50678.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] Length = 476 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 119/466 (25%), Positives = 219/466 (46%), Gaps = 32/466 (6%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKN--------LINIDT---LKWWESF 56 L +LLA CT GP+ + P L ++ + G++ ++ D WW F Sbjct: 13 LTGLLLAACTSPAGPQDSGIETPSLWSRLT-GSAPAKADPTAPLVLGPDAEVEQTWWRRF 71 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR----FIPN 111 D +L+ LV AL N T+ A R+ A+ R+ L P S A + R + Sbjct: 72 GDPTLDTLVADALAGNQTLAMAKARVEEAQAARGLARSRLLPDISAAGSAQRANQGYATG 131 Query: 112 LKTNSTGQLD--SDWKIDLFG--QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 K ++D + W++DLFG Q R E++ A L S A ++ +++++ SY D Sbjct: 132 DKAVGVAEIDLKATWELDLFGRNQARMAEAN-ALLQSEEATRQGVRVALLAEVARSYFDL 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R +I + Q L ++ +E+ + S + + A + + E+ IP+LE + Sbjct: 191 RDAIRQIELTRQNLGTQRRTLEIIRAQRQGALASDFDVQRAGARVSATEALIPSLETARD 250 Query: 228 MNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ +S LLG + L Q+ P+ + I PA ++ RPD+R E++ Sbjct: 251 VALNRLSVLLGRVPGGRDALLAELPQAKPLNPS----VAIAAPAKVLAARPDVRAAERRF 306 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A S++ A ++L+P++SL + + P T W G L PI + G+I+S I Sbjct: 307 AASLSAKDAATAELFPNISL--AALFGTQTATPMNATPWGIGLTLVQPILNFGRIESQID 364 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ ++ ++ +Q +VL A++++ENAL+ + L V ++++ L+ + Sbjct: 365 AADARQRQAFLAYQRSVLEALEDMENALSRYGHEAGRNVALATGVAQNRRASELAHTQFT 424 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LLD+L ER E + + L ++ + +Y A G G++ Sbjct: 425 NGYTGLLDVLVAERDLLDAEAAQAASDTSLRRNLIAIYAAAGGGWD 470 >gi|237811927|ref|YP_002896378.1| efflux transporter, outer membrane factor [Burkholderia pseudomallei MSHR346] gi|237502768|gb|ACQ95086.1| efflux transporter, outer membrane factor [Burkholderia pseudomallei MSHR346] Length = 566 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 127/519 (24%), Positives = 227/519 (43%), Gaps = 93/519 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 24 CTVGPDFHPPRADV-PAQWHDVTVTSASSASSAASPPAAGSVAPNAGAPPRSLPTVEADP 82 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 83 DPRWWRTFGDPVLDRLVERAAQDNLDVQAAVPRIAEARAQVRAAAAQGLPDVRASASYQR 142 Query: 107 -----------------------------RFIPN----LKTNSTGQLD------------ 121 R P L+ + LD Sbjct: 143 EQLGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 202 Query: 122 --SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 203 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 262 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 263 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 322 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 323 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 380 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 381 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 436 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 437 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 496 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 497 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 535 >gi|237747989|ref|ZP_04578469.1| RND efflux system outer membrane lipoprotein [Oxalobacter formigenes OXCC13] gi|229379351|gb|EEO29442.1| RND efflux system outer membrane lipoprotein [Oxalobacter formigenes OXCC13] Length = 530 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 122/459 (26%), Positives = 224/459 (48%), Gaps = 24/459 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKL 64 +L LAGC VGP+Y +P + + T K D WW F D L++L Sbjct: 21 MALCAATLAGCAVGPDYVQPPIDVPATYKEDSLWKTAKPSDEYPRGAWWSVFKDPELDRL 80 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLKTNSTGQ--- 119 + + +QNLTI QA + A+ + ++ LFPS AS + F N T+++ Q Sbjct: 81 MVLLNKQNLTIAQAEAQYRQAQALLRQAQSSLFPSLSLDASRTRGFQSNTSTSASTQNAF 140 Query: 120 -LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++D++G RR++E+ A ++ AQ++ KL+ +++ +Y+ ++ Sbjct: 141 VGNLSWEVDIWGGVRRNVEAGEAGRQASAAQLEAIKLSSQAQMATAYLQLVITDRQVKQL 200 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L +++ L+ +F G S + + E+++K+ ++ ++ + H+I+ + Sbjct: 201 EESETLLAESLRLTKNQFAVGIVSDADVAQAESQLKTAQAATVDMKLARSQLEHSIAVSI 260 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + M K + Y+P I G+P+ L++ RPD+ E+K+A + A IG+AK Sbjct: 261 GQAPSTLTIDMAK------ADPYLPQIPAGLPSALLQRRPDVASAERKVAQANALIGVAK 314 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 S +P+LS++ S ++SF N WS GP++ L IFD G + +A + Sbjct: 315 SAFFPALSISASGGF-RNSSFADLFTVPNRIWSIGPQIALSIFDAGLRSAQTDQAIAVYD 373 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E +++ VL A +EVE+ L + A+ K++ +++M Y+ G S + Sbjct: 374 ETVAAYRQKVLIAFQEVEDNLAAQAMLGDASDMQTAALNAAKRAETITMNQYKAGVVSYI 433 Query: 413 DILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGY 450 ++L + E L ++ KRQ S V L AIG + Sbjct: 434 NVLIAQNTRIAAENTLYNVKKRQFTSS-VALIAAIGGQW 471 >gi|167564942|ref|ZP_02357858.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 510 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 122/484 (25%), Positives = 225/484 (46%), Gaps = 47/484 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWW 53 A L + LLA C VGP+Y +P + P L G K D +WW Sbjct: 18 AASGLLVTLLAACAVGPDYKRPDVATPAAFKEAPALSPGEQAGTWKTAEPADAAHRGEWW 77 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASI 104 +F D L+ L + AL N + A R+ A+ + R+ FP S Sbjct: 78 RAFGDPVLDALEEQALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSS 137 Query: 105 SHRFIPNLK--TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + +F P TN+T Q ++ DLFG+ R++E+S A+ + A +L + + Sbjct: 138 ASQFQPQGAGPTNATLWRAQGTVSYEADLFGRVSRNVEASRADAAQSEALFRSVQLALQA 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y + R + + ++L ++ ++L +F++G S+L + + + E+ + ++D Sbjct: 198 DVAQNYFELRRLDSDQDLYRRTVELREQALKLVQRRFSEGDISELDVSRAKNELATAQAD 257 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRN 274 + + ++ H ++ LLG +F +F+ P+ + G+P+ L+ Sbjct: 258 AVGVARRRAVSEHALAILLGKAPADF---------SFKETPIAPVAVRVPAGLPSALLER 308 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP--- 328 RPDI E+ + + A++G+AKS +P L + G+ A T N F + + GP Sbjct: 309 RPDIAAAERAMMAANARVGLAKSAYFPKLDITGAFGFEAATLGNLFLWSSRTFLLGPFAG 368 Query: 329 -KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G+ + + +A + E+ +++ VL A +EVE+ L + + Sbjct: 369 TALTLPIFDGGRRSAGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQN 428 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 AV +++ +LS Y++G S LD++D ER+ + ++ + A S V+L A+G Sbjct: 429 DAVNASRRAATLSRTQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAASTVNLIRALG 488 Query: 448 SGYN 451 G+ Sbjct: 489 GGWG 492 >gi|297538132|ref|YP_003673901.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera sp. 301] gi|297257479|gb|ADI29324.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera sp. 301] Length = 479 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 218/458 (47%), Gaps = 29/458 (6%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + LL+ C +VGP+Y +P + + P+Q+S + + + WW ++ D LN LV ALQ Sbjct: 23 MALLSACKSVGPDYERPQLAV-PSQYSEQADQAQSKVSS-TWWTAYQDQLLNDLVSKALQ 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNST---------GQ 119 N I A R+ A + A P A + + L N + Sbjct: 81 SNTDIKLAVARVEEADALAREIGAATLPQVDLNAGANRSRVTELGGNPVTTNPRNDYKAE 140 Query: 120 LDSDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L + ++ID +G+ RR ES A L S YA+ D L++ + +Y+ R +I++ Sbjct: 141 LGTSFEIDFWGKLRRAKESVRAQILSSQYAK-DTVALSLSGLVATNYLTLRSLDSQITLT 199 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + + ++ L+ + G S L + + E ++ + + L + +++H ++TL Sbjct: 200 QESMKSREASLGLTKRRLEGGVASALDVYQAEVASANLSAQLAELTRQRALSLHQLATLT 259 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G + S + Q L +P G+P+ L+ RPD+ E+++ + A IG+A Sbjct: 260 GDLSLNI------ASADIQA-LPVPPTPPAGLPSRLLEARPDVAQAEQQMIAANANIGVA 312 Query: 296 KSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ LYP++SL G +L + W+ G LYLPIFD GK+ S + +A + + Sbjct: 313 KAALYPTISLTAGLGGESLELGDILKSAARIWTGGVSLYLPIFDSGKLNSKVDQASAKQK 372 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +++ + A KEV +AL + ++ + L + KK++ +S Y+ G + L Sbjct: 373 QALASYEGAIQTAFKEVNDALVDLRQNTEREDALNKSQIAAKKALDVSENRYKSGYSAYL 432 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D+LD +R + +++ + V L+ A+G G+ Sbjct: 433 DVLDAQRVYNDSALSYVQSRQARLAATVSLFKALGGGW 470 >gi|160895614|ref|YP_001561196.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160361198|gb|ABX32811.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 477 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 123/464 (26%), Positives = 222/464 (47%), Gaps = 40/464 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + GC VGP++ P P QF+ + D +W F D L +LV+ AL Sbjct: 21 VGGCAVGPDFKAPAAPRAAAQFARAEPAPATPQAEPDA-AFWRQFQDPQLTQLVERALGD 79 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHR------------FIPNLKTNSTGQ 119 N + A R++ A+ + R D P+ ++S R + P + + T Sbjct: 80 NQDLQVALARLDGAQALLRESRFDQLPT--VTMSGRATQQKLSESEAFYGPRSQRSYTAG 137 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W+ID+FG+ RR IE+ A+L + A + ++ + +++ SY D R +++R+++A Sbjct: 138 LAASWEIDVFGRVRRSIEARHADLRADAADLAALQVAIAAQVAGSYADLRGWQQRLALAQ 197 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + L L+ G+ ++ L + +A++++ S IP L+ M H ++ L G Sbjct: 198 ANAANQQDTLRLVQLRLAHGSGTEFDLARAQAQLEATRSRIPALQAQIAMAQHRLAVLTG 257 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + + P L I+ G PA L+R RPD+ E +L + A+IG+A +D Sbjct: 258 QVPEALIAVLDVPAAL--PQLPPAIDPGTPAGLLRRRPDVAVAEARLHAATARIGVATAD 315 Query: 299 LYPSLSLNG---SIALTHDNSFPGYNTH--------WSFGPKLYLPIFDKGKIKSNIRRA 347 L+P LSL G S AL + F G + WSF D G++++ I + Sbjct: 316 LFPRLSLGGLLGSTALHGGSLFEGASARSSVFLGVDWSF--------LDVGRVRARIAAS 367 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ AQ +Q+TVL A+++ ENAL + + L A E +++ L+ Y+ G Sbjct: 368 EAGAQAALAQYQQTVLLALEDTENALVRLQRTRSEDAHLAQAAEQRQRAEQLAQRRYQLG 427 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L ++LD +R + + ++ + ++ V LY A+ G++ Sbjct: 428 SVGLYEVLDAQRDLYAAQDAAADSRARGLRAAVALYQALAGGWD 471 >gi|313108866|ref|ZP_07794849.1| putative outer membrane efflux protein [Pseudomonas aeruginosa 39016] gi|310881351|gb|EFQ39945.1| putative outer membrane efflux protein [Pseudomonas aeruginosa 39016] Length = 491 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 222/461 (48%), Gaps = 29/461 (6%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LL GC VGP+Y P + ++ + ++ ++WW F++ +L L++ AL Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGSGVE-IEWWRGFDEPALESLIQRALA 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST---------GQ 119 NL I A R++ AK + R + P + + R ++T + G Sbjct: 71 ANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDIETYRGA 130 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + + +++ H Sbjct: 131 LDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLQGIEAELAVVH 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + ++ LL Sbjct: 191 DIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNALAVLLA 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 F + + S L + + +G PA L+ R DI E+ LA + A+IG+ + Sbjct: 251 EAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATARIGVETA 307 Query: 298 DLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 LYP + + GSI L D S +N P + + D+G++++ I +E+ A Sbjct: 308 GLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRARITASEARA 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I + TVL A++E ++A ++ +L A ++++ L+ + QG Sbjct: 365 QEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERFVQGDGE 423 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 424 YLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|296387976|ref|ZP_06877451.1| putative outer membrane efflux protein [Pseudomonas aeruginosa PAb1] Length = 491 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 222/461 (48%), Gaps = 29/461 (6%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LL GC VGP+Y P + ++ + ++ ++WW F++ +L L++ AL Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGSGVE-IEWWRGFDEPALESLIQRALA 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST---------GQ 119 NL I A R++ AK + R + P + + R ++T + G Sbjct: 71 ANLDIALANARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDIETYRGA 130 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + + +++ H Sbjct: 131 LDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLQGIEAELAVVH 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + ++ LL Sbjct: 191 DIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNALAVLLA 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 F + + S L + + +G PA L+ R DI E+ LA + A+IG+ + Sbjct: 251 EAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATARIGVETA 307 Query: 298 DLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 LYP + + GSI L D S +N P + + D+G++++ I +E+ A Sbjct: 308 GLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRARIAASEARA 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I + TVL A++E ++A ++ +L A ++++ L+ + QG Sbjct: 365 QEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERFVQGDGE 423 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 424 YLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|134282772|ref|ZP_01769475.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|134245858|gb|EBA45949.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] Length = 563 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 125/520 (24%), Positives = 227/520 (43%), Gaps = 93/520 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 21 CTVGPDFHPPRADV-PAQWHDVTATSTSSASSAASPPAAGSGAPNAGAPPRSLPTVEADP 79 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S++ Sbjct: 80 DPRWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQR 139 Query: 108 -------FIPNLKTNST-----------------------------------------GQ 119 F+ + N+ Sbjct: 140 EQLGLKGFLEDGGVNAQLKRLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 199 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 200 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 259 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 260 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 319 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 320 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 377 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 378 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 433 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 434 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 493 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 494 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 533 >gi|186473450|ref|YP_001860792.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184195782|gb|ACC73746.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 521 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/485 (24%), Positives = 216/485 (44%), Gaps = 63/485 (12%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------SIGNSKNLINIDTL---KWWE 54 C+V P Y +P P P+ F G K + +WW Sbjct: 29 CSVEPTYNRPDAPT-PSAFKEAPATATTGDAAAAPLPASEAGTWKTAEPAEDAHRGEWWT 87 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP- 110 F D++LN L K A N + A R+ ++ RA +PS + R P Sbjct: 88 VFGDSTLNALEKQAADANQDLKAAAARVQQSRALTNEARAAWYPSIDAGFGPTRERLSPA 147 Query: 111 --NLKTNSTGQLDSDWK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 NL N+ + W+ +DLFG+ ++ ++ A+ + A +L + + Sbjct: 148 SQNLPNNANVPTQTLWRAQTTVAYEVDLFGRVSSNVHAASADEAQSEALFRSVQLALQAD 207 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y R F ++S+ Q + L + ++L +F +G ++L + + E+ + +D Sbjct: 208 VAQNYFQLREFDTQLSLYRQTVTLRENALKLVERRFNEGDINELDVSRARNELATARADA 267 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNR 275 + + + H+++ LLG P +F F P+ + G+P+ L+ R Sbjct: 268 VGVARQRAASEHSLAILLGKPPADF---------TFPETPLAPVTVQVPAGLPSALLERR 318 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP-- 328 PDI E+ +A + A++G+AKS +P L + G+ +++ G WS GP Sbjct: 319 PDISAAERGMAAANARVGLAKSAFFPKLDITGAFGF--ESATLGDLFMWSSRAFLLGPFA 376 Query: 329 --KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L +PIFD G+ K+N+ A + E +++ VL A +EVE+ L+ + + Sbjct: 377 GTALTVPIFDGGRRKANLANARAKYDEDVAQYRQQVLVAFREVEDNLSDLRLLGDQTREQ 436 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 +AV +++ LS Y++G+ S LD++D +R + ++ LS A + V+L A+ Sbjct: 437 NNAVNASQRAEHLSQTQYQEGQVSYLDVIDAQRQVLQSQLQLSHLAGTQAVATVNLIRAL 496 Query: 447 GSGYN 451 G G+ Sbjct: 497 GGGWG 501 >gi|330960265|gb|EGH60525.1| outer membrane efflux protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 477 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 29/454 (6%) Query: 20 VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNL 73 VGP+Y P + P L + + G S N ++ + WW + D L++LV+ A+ N Sbjct: 22 VGPDYRLPKDGAINRPDLQGELA-GRSVNTVSAPVPVHWWRLYQDARLDELVRQAMASNT 80 Query: 74 TILQATERINAAK-ENILSVRADLFPSSYASISHRF------------IPNLKTNSTGQL 120 + A + ++ N + A F + + R +P G + Sbjct: 81 DLRVAAANLQRSRYRNAEAEAAGGFTNGAKIGAQRVQESGEAYLLTDKVPVSNVGDVG-I 139 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y E + IAH+ Sbjct: 140 TTSYQFDLFGTLQRGIEAAQANIDANQAAVDTARITVVADVVRAYTQICAANEELDIAHE 199 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L L ++++ L+ G + + + + + KS+ +++P E + + +S LL Sbjct: 200 SLALQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAAMFRLSMLLAK 259 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P + + + N P++ + +G A L++ RPD+R E++LA S A+IG+A +L Sbjct: 260 PVEQLPAGV--STCNALPHIAQVMPVGDGAALLKRRPDVRQAERQLAVSTAQIGVATGEL 317 Query: 300 YPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP +S+ SI T + P N W FGP L + G ++ I +AE+SA+ Sbjct: 318 YPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTLPSNGS-RARIHQAEASAEAALA 375 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 + VLNAI+E + L L+ A + K++ + Y+ GR S L L Sbjct: 376 RFDGVVLNAIRETQTGLAQYTALLDRRDALKDAEQSAKEAADQTHRFYQAGRASFLADLQ 435 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R V L+ A ++A ++L++A+G G+ Sbjct: 436 ATRTYTDVRAQLAEANTEVAMGQINLFLALGGGW 469 >gi|218890252|ref|YP_002439116.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|218770475|emb|CAW26240.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 491 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 219/467 (46%), Gaps = 41/467 (8%) Query: 12 IVLLAGCT-VGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++LL GC VGP+Y P +P G + ++WW F++ +L L Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGGGVE-------IEWWRGFDEPALESL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST----- 117 ++ AL NL I A R++ AK + R + P + + R ++T + Sbjct: 65 IQRALAANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDI 124 Query: 118 ----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + + Sbjct: 125 ETYRGALDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLQGIEA 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ H I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + Sbjct: 185 ELAVVHDIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LL F + + S L + + +G PA L+ R DI E+ LA + A+ Sbjct: 245 LAVLLAEAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATAR 301 Query: 292 IGIAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG+ + LYP + + GSI L D S +N P + + D+G+++ I Sbjct: 302 IGVETAGLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRVRIA 358 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINY 404 +E+ AQE I + TVL A++E ++A ++ +L A ++++ L+ + Sbjct: 359 ASEARAQEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERF 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 QG LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 418 VQGDGEYLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|299069959|emb|CBJ41244.1| Putative outer membrane drug efflux lipoprotein [Ralstonia solanacearum CMR15] Length = 483 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 217/459 (47%), Gaps = 30/459 (6%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC++ P Y +P M + T+ ++ + WW+ FND L++L+ AL++N Sbjct: 21 GCSLAPPYERPAMDVPAHWQTEAPWRAAQPADDAPKGPWWQHFNDPQLDRLMAQALRENQ 80 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFI-------------PNLKT---NST 117 ++ A + A+ RA L P AS S + P + T + Sbjct: 81 SLKVAVSNLEQAQALTRVARASLLPQVTASTSGARLRTSADRPLSSYSSPTMSTVQNDVV 140 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + D ++ DLFG+ R +I ++ A + A A ++ +L + +++ ++ R I + Sbjct: 141 VRADVSYEADLFGRVRSNIANATAGEEQAAANLENVRLLLAAQVATTWYSLRETDAEIDV 200 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L L +K ++ + G S L L + +A + S + L+K H ++TL Sbjct: 201 VQQGLALQRKALDFVTSRHQDGVASGLDLAQQQALVDSTATQAELLQKQRTQYEHALATL 260 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA F ++ QP + I + +P+D+I RPD+ E+ A + A +G+A+ Sbjct: 261 VGTPAPAF--HLAPAPLAGQPPV---IPVALPSDVIERRPDVAAAERGAAAANASVGVAR 315 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+ LNG + F + WSFG ++ +FD G+ ++ + A + Q Sbjct: 316 AAFFPSIMLNGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRARVDFANAGYQG 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A++EVE+ L+ + + T+ + +VE +K ++ Y G + LD Sbjct: 376 AIANYRQTVLGALQEVEDGLSGLQALDRAATQARASVESARKVYDIASARYEGGLATSLD 435 Query: 414 ILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +++ + + I +QL S V L A+G +N Sbjct: 436 VITAQQSLLNNQRTAVQILGQQLTTS-VFLVKAVGGDWN 473 >gi|159121873|gb|ABW87978.1| RND-like outer membrane protein [Pseudomonas fluorescens] Length = 474 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 221/458 (48%), Gaps = 28/458 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIAL 69 +L GC++ PEY +P P P Q+ G L + W + F+D +L +L+ AL Sbjct: 14 MLGGCSLIPEYQQPAAPT-PAQYPQGGVYRLAQAGNMAQNPDWQQLFHDPALQQLINDAL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPN---------LKTNSTG 118 N + A + A + RADLFP S+ + + +P + +N + Sbjct: 73 VNNRDLRVAALNVQAFQAQYRIQRADLFPAISATGAGKRQKLPGSVTGTGKSAITSNYSA 132 Query: 119 QLD-SDWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L S +++DLFG+ R + ++ L L S A+ A+L++++ + +Y+ R +E ++ Sbjct: 133 TLGLSAYELDLFGRVRSLSEQALLTYLGSEQARRS-AQLSLVANVANAYLTWRADQELLA 191 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + +L+ + G S L +V+ ++S + + E+ +++N+ Sbjct: 192 LAEQTLAANDHSWQLTRRSKSAGKASALDVVQARTAVESTRASVARYERQVAQDLNNLML 251 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G P E L + +L + G+P+DL++ RPDI E +L + A IG A Sbjct: 252 LVGGPVDEHLP-----ARPLADDLVARVPAGLPSDLLQRRPDILQAEYQLQAANANIGAA 306 Query: 296 KSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS++L GS + F G + W+F P++ LPIF+ G +++++ A+ Sbjct: 307 RAAFFPSVTLTANAGSTSTELSGLFKGGSGSWTFQPQINLPIFNAGSLRASLDYAKLQKD 366 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++++ A +EV + L + + + VE ++ +L+ YR G S L Sbjct: 367 ITVAQYEKSIQAAFQEVADGLAARQTFNDQLAAQRDFVEANQTYYNLAQHRYRSGVDSNL 426 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ + L + + + V+LY A+G + Sbjct: 427 TFLDAQRSLFSAQQALIVDRLAQLVAEVNLYTALGGAW 464 >gi|83860056|ref|ZP_00953576.1| hypothetical protein OA2633_08644 [Oceanicaulis alexandrii HTCC2633] gi|83852415|gb|EAP90269.1| hypothetical protein OA2633_08644 [Oceanicaulis alexandrii HTCC2633] Length = 450 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 121/430 (28%), Positives = 206/430 (47%), Gaps = 16/430 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 ++GC GP+Y +P P P QFS ++ ++ WW F D +L +V AL NL Sbjct: 8 VSGCMAGPDYVRPITPE-PEQFSRSLEQDADDLAGEAWWSGFEDPTLAAVVNEALADNLD 66 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH 134 I QAT+R+ AA+ + + R+D P A +S+ + T L +D+ G+ R Sbjct: 67 IAQATQRLIAAEALLGAARSDFLPDLDAGVSYTARSSGGDTGTASLSFGQVLDINGRLRR 126 Query: 135 IESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 +E L SAY D+ +L S Y+ R + R+++ LDL ++ +++ Sbjct: 127 LEDRAQARVLASAYEVEDVRRLTAASAAT-LYVQLRRARARLALLDASLDLQQRTLDIVQ 185 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----YPATEFLHYM 248 + G ++ L + + A++ + LE ++ ++ LLG P Sbjct: 186 RRAEAGLSADLDVRRAAADLARTRAQRGALELQQTRALNALAVLLGRTPGAPIALLEDAG 245 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 + S+ Q I IG PA LI+ RPD+R E +L + A +G+ ++LYPSL L GS Sbjct: 246 ARDSDALQLGYVAEIEIGEPARLIQRRPDLRAAEARLIAATADVGVQAAELYPSLRLPGS 305 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 ++ ++ T S G L +P+ D G+ ++ + AE+ A E + +Q VL A++E Sbjct: 306 VSTDLEDGLSDGLTA-SLGAVLDIPLLDFGRREAELTAAEAQAAEAALAYQNVVLGALEE 364 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER-------AT 421 VE L +I + + L AV +++ YR+G S +D+LD +R A Sbjct: 365 VETGLVAIESVQDRLDDLGVAVAEGERAYDQLNALYREGLASFIDVLDAQRTLIGNREAL 424 Query: 422 AKVEVDLSIA 431 + DL++A Sbjct: 425 VDTQADLALA 434 >gi|300692984|ref|YP_003753979.1| outer membrane protein (probable drug efflux lipoprotein) [Ralstonia solanacearum PSI07] gi|299080044|emb|CBJ52718.1| putative outer membrane protein (Probable drug efflux lipoprotein) [Ralstonia solanacearum PSI07] Length = 510 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 123/465 (26%), Positives = 217/465 (46%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLLP--TQFSIGNS---------KNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ Q G S +N L W E F D L Sbjct: 18 VLSGCSLAPRYERPTAPVAGDYPQAQAGYSVPADTAKPGENAPRATDLGWREFFPDPRLQ 77 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP---------- 110 KL+ +AL+ N + A I AA+ ADL P ++ A+ + P Sbjct: 78 KLIGLALENNRDLRVAILNIEAARAQYRLQIADLLPPVNATATYTRSLTPQSISQTGQDI 137 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N K G S ++++LF S+ A+ + ++++IS++ +Y++ R + Sbjct: 138 NTKQYQLGVGISSYQVNLFSVGDVTSSARASYLATEEGQRATQISLISQVAKAYLNERAY 197 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ +A Q L + +L+ +F GA S L L + E ++S + L + + Sbjct: 198 AEQLELAQQTLKGREDYYKLAKQRFDVGAASALDLRQNETLVESARVSVAQLTRQYAQAT 257 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P L S+ + I G+P++L+ RPDIR E+KL + A Sbjct: 258 NALVLLVGAPLPADLPAPTTVSSE---RIVADIPPGLPSELLEQRPDIRQAEQKLIAANA 314 Query: 291 KIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +PS+ L ++ HD F WSF P L LPIF+ G N+ Sbjct: 315 NIGVARAAFFPSIGLTSNVGTASTALHD-LFKSGTGLWSFVPNLTLPIFNWGTNVFNLDL 373 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + +++T+ A +EV +AL + ++ V + + + ++LS YR Sbjct: 374 TKANQKIALANYEKTIQTAFQEVSDALVARGTLEEQVAAQKRFRDATAERLTLSDQRYRN 433 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 434 GVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 476 >gi|295680974|ref|YP_003609548.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295440869|gb|ADG20037.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 505 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 113/473 (23%), Positives = 218/473 (46%), Gaps = 41/473 (8%) Query: 15 LAGCTVGPEYTKPHMPLL------PTQFSI-------GNSKNLINIDTLK--WWESFNDT 59 + CTVGP++ +P + + P SI G +++ + D WW +F Sbjct: 33 MCACTVGPDFHRPDVTSVSSYTAAPLAASIVAAEGPGGGAQHFVPTDQPGDGWWRAFGSP 92 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASIS---HRFIPNLK-- 113 +LN LV+ AL + T+ QA +++ A+++ + L+P A++S R P Sbjct: 93 ALNALVQQALDDSPTLAQARAKLDQAQQDYRAQAGGTLWPQVDANLSTTRERIDPEALGF 152 Query: 114 ------------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 T + Q+ + +DLFG RR +E+ A +D +++ A+L V + Sbjct: 153 GQLTQGRAFAPFTLYSAQVTVSYTLDLFGANRRALEAVAAQVDYQQYELEAARLTVAGNV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I++ +L + ++++ +F G S++ L+ ++ + +P Sbjct: 213 VTAAIRRASLARQIALTEALLANQMQQLDIAGRRFRAGGISEVDLLSQRTLVQQTRATLP 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDI 278 L H ++ LG E + + L +P + + +P+ L + RPDI Sbjct: 273 PLRTQLAQTDHQLAIYLGRAPAELTTTHDLAALDLD-TLALPADLPVTLPSTLAQQRPDI 331 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 R E L + A IG+A ++LYP ++L+GS A N G+N W+ G L P+F Sbjct: 332 RASEALLHQASANIGVATANLYPRITLSGSAATERINVSDLLTGFNV-WNIGAGLTQPLF 390 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G++ + +E++ Q +++TVL +++V +AL ++++D + L A + Sbjct: 391 HGGELLARKHSSEAAYQAALAVYKQTVLQGLQQVADALRALDQDAIALQALDAAQRSAQH 450 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S ++ Y G S L +LD +R + +D + A Q L+ A+G+ Sbjct: 451 SAGIASQRYAAGGISQLTLLDTQRQELQTGLDRTKAAAQRYADTAALFQALGA 503 >gi|296102441|ref|YP_003612587.1| RND efflux system outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056900|gb|ADF61638.1| RND efflux system outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 459 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 106/415 (25%), Positives = 205/415 (49%), Gaps = 24/415 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 WW +F+D +LN+ V AL+ N +L A ERIN + + + LFPS A ++ Sbjct: 50 WWRNFHDNNLNRYVDQALKNNSDVLIARERINEYQARVYAADGSLFPSLDAGVTGTRART 109 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 +P T G L + + +D++G R ++ A+L++ A A L V S + Sbjct: 110 QSAATGLPVYSTLYKGSLTASYDVDIWGVNRSTANAAQASLEAQKAAAAAADLTVASSVA 169 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ E++ + L ++ L+ +F G +S+L L++ ++E+++ + +P Sbjct: 170 SGYVTLLSLDEQLRVTESTLKSREEAFNLAKRQFETGYSSRLELMQSDSELRATRAQVPL 229 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ + +S LLG E +S +F + + +P+ L+ RPDI Sbjct: 230 LQHQIAQQENALSLLLGSNPGEV-----ARSESFSTLTPLRLPSQLPSSLLNRRPDIVQA 284 Query: 282 EKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 E++L + A + +++ L PS++L GSI D + G + WS G + P+ Sbjct: 285 ERQLIAADASLAASRASLLPSINLKATGSI---QDRTLSGLLDNPLQLWSAGGSILAPLL 341 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ + + + ++S + +++TV NA EV N+L +I ++ +++L E+ ++ Sbjct: 342 NRQALNAQVDISQSQRNQALYAYEKTVRNAFAEVNNSLDAITRYQEQLSELLAQQEVAQE 401 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++ YR G S LD+LD +R V+ ++ K L + +DLY A+G G+ Sbjct: 402 TLRIAQNRYRNGYSSYLDVLDAQRTLYSVQTNVVQVKNNLLLAQIDLYKALGGGW 456 >gi|224824201|ref|ZP_03697309.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224603620|gb|EEG09795.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 488 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 44/466 (9%) Query: 17 GCTVGPEYTKPHMPL-------------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 GC++ P Y +P P+ TQ + GN+ ++ W E F D L K Sbjct: 17 GCSLAPTYQRPAAPVAGQWPSGPAYGGDTATQATKGNAADI------GWREFFADARLQK 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQL 120 L+++AL N + A + + RADLFP+ A+ S R +L ++ + Sbjct: 71 LIELALANNRDLRVAMLNVEKTRAQYQIQRADLFPAIDATGSGTRQRLPADLSSSGRAGV 130 Query: 121 D---------SDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDAR 168 + +++DLFG+ + +++ L+ +A + A+++++S++ Y+ R Sbjct: 131 SGKYSASVGFTAYELDLFGRVQSLKNEA--LEQYFASGEAQKSAQISLVSEVASQYLTLR 188 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+ + L + + +L+ +F G + L L ++++++ +S++ +L + Sbjct: 189 ALDEQQKVVTDTLTAQQSSYDLTKKRFDVGTVTALDLSTADSQVQTAKSNLASLMQQRAQ 248 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G P L Q N F L + G+P+DL+ RPDI E +L Sbjct: 249 AENALVLLVGQPLPADL----PQGNAFDAQGLLADLPAGLPSDLLERRPDIAQAEHQLKA 304 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +PS+SL GS N F G WSF P++ LPIFD GK + + Sbjct: 305 ANADIGAARAAFFPSISLTGSYGTASSELSNLFKGGQLAWSFIPQINLPIFDWGKNAAGL 364 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + + + ++++V +A +EV +ALT+ ++ + + V+ + L+ + Y Sbjct: 365 DVSTTGKKIAVAQYEKSVQSAFREVSDALTARAMLEQQIAAQEALVKSETQRYQLAELRY 424 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R G S L +LD +R+ + L A+ + V LY A+G G+ Sbjct: 425 RNGVDSALTLLDAQRSLYSAQQGLIQARLARLTNQVTLYKALGGGW 470 >gi|157145694|ref|YP_001453013.1| hypothetical protein CKO_01443 [Citrobacter koseri ATCC BAA-895] gi|157082899|gb|ABV12577.1| hypothetical protein CKO_01443 [Citrobacter koseri ATCC BAA-895] Length = 458 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/414 (25%), Positives = 209/414 (50%), Gaps = 20/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----- 106 WW +F+D+ LN+ V ALQ N +L A ER+N + + + LFPS A +S Sbjct: 50 WWRNFHDSHLNRYVDQALQNNSDVLIARERVNEYQARVYAAEGSLFPSLDAGVSGARART 109 Query: 107 ----RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 +P T G L + + +D++G R ++ A+L + A A L V S + Sbjct: 110 QSAATGLPIYSTLYKGSLTASYDVDIWGVNRSTASAARASLAAQKAAAAAADLTVASSVA 169 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ E++++ L ++ L+ ++ G +S+L L++ ++E++S + IP Sbjct: 170 SGYVTLLALDEQLNVTKSTLKSREEAWNLAKRQYETGYSSRLELMQSDSELRSTRAQIPL 229 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 LE + +S LLG T +S+ F + + +P+ L+ RPD+ Sbjct: 230 LEHQIAQQENALSLLLGSNPTRL-----ARSDRFDALTPLTLPSQLPSSLLNRRPDVVQA 284 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDK 337 E++L + A + +++ L PS++L + ++ D + PG WS G + P+ ++ Sbjct: 285 ERQLIATDATLAASRASLLPSINLTATGSV-QDRTLPGLLDDPLRLWSIGGSILAPLLNR 343 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 + + + ++S + ++++TV NA +EV ++L +I ++ +++LQ ++ ++++ Sbjct: 344 QALNAQVDISQSQRNQALYSYEKTVRNAFREVNDSLDAITRYQEQLSELQAQQDVAQETL 403 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ YR G S LD+LD +R V+ ++ K L + +DLY A+G G++ Sbjct: 404 RIAQNRYRNGYSSYLDVLDAQRTLFSVQTNVVQVKNNLLLAQIDLYKALGGGWS 457 >gi|162147390|ref|YP_001601851.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785967|emb|CAP55548.1| putative Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 507 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 120/479 (25%), Positives = 224/479 (46%), Gaps = 50/479 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTS 60 L +LAGCTVGP Y M L P T I + N + WW F D Sbjct: 17 LAATMLAGCTVGPRYQPDRMKLPPGFAEDEHAATPAEIART----NAELKDWWHRFGDAE 72 Query: 61 LNKLVKIALQQNLTILQATERINAAK---------------------ENILSVRADLFPS 99 L++LV A+ N + A +RI A + ++ S+ D +P Sbjct: 73 LDRLVDRAIAGNYDLQIAGQRILAERALRDVQASAWYPQVDANTTDGDSRYSINVDNWPL 132 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + ++R P S G + + W+ID+FG+ RR +E+S ++ + + ++S Sbjct: 133 RPGNPANR--PGASYLSYG-VSASWQIDVFGRIRRAVEASEHAVEENVEERRAVLMTMLS 189 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ Y+ R + R+ I+++ + + ++ +L+ + +G + L + + +AE+ + ++ Sbjct: 190 SLVSDYMVLRDTQLRLEISNRNIGVAQEAYDLTRRLYLEGVGNTLQIAQAKAELDAQQAA 249 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 L H I L+G P T + + +P +P +P+ ++ NRP Sbjct: 250 REPLRTHIAQITHAIDVLMGQVPGT-----TEAELKVARPLPQVPEFPATVPSIVLGNRP 304 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 DIR E+ A++ A+IG+A + +YP+ L+ N + + + F W F L Sbjct: 305 DIRRAERAYAEATARIGVAVAQMYPNFAIPLNFNPNASAMY-QVFEAGALSWQFFMLASL 363 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ GK+ IR A+++A+ +T+++TVL A +EVE+A+ + ++D + L A E Sbjct: 364 PLMHGGKLTGQIRAAQAAAEASRLTYRQTVLGAFREVEDAMAAWHDDVEHTELLHRAAED 423 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Y G L++L ER E ++A+ + + +DLY A+G+G+ Sbjct: 424 SRLASDRARKLYAAGLVGFLEVLTTERTALAAENAEAVARLERLQDAIDLYTAMGAGWQ 482 >gi|113866609|ref|YP_725098.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113525385|emb|CAJ91730.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 497 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 127/465 (27%), Positives = 226/465 (48%), Gaps = 38/465 (8%) Query: 13 VLLAGCTVGPEYTKPHMPL--------LPTQFSIGNSKNLINIDTLK---WWESFNDTSL 61 +LLAGC VGP+Y +P P+ T G+ K D L WW F D L Sbjct: 25 LLLAGCAVGPDYQRPDAPVSASFKEADAATPAWTGDWKPAEPQDALARADWWTVFGDAQL 84 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNST 117 + L+ N I A + A ++ + RA FP+ + AS + + + Sbjct: 85 DALMSEVQISNQNIKAAEAQYRQAVASLQAARAGFFPTVDAQAGASRARGASGSTLNGQS 144 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W+ID++G+ RR +ESS A+ ++ A + L+ + L SY R + ++ Sbjct: 145 ATLGATWEIDVWGRVRRQVESSEASAQASQADLASTLLSTQATLAQSYFLLRVADAQKAL 204 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + Y+K+++L ++ G + +++ E ++KS ++ ++ + H I+ L Sbjct: 205 LDRTVADYQKSLQLVQNQYAAGTAQRSDVLQSETQLKSAQAQQIDIQITRAQLEHAIAVL 264 Query: 237 LGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G P +++F+ L +P +P+ L+ RPDI E+++A + A+IG+A Sbjct: 265 VGKPPAALTLV----ADDFRTALPRVPA--AVPSQLLERRPDIGAAERRMASANAQIGVA 318 Query: 296 KSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++ YP+LSL+ S LT S P + WS G L +FD G ++S + + Sbjct: 319 QAAYYPTLSLSASGGLTASTLARWMSLP--DRIWSIGGGLAGTLFD-GGLRSAAKAQAVA 375 Query: 351 AQEQYIT-WQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 A +Q + +++TVL A +EVE+ L + + E + +V A+ ++++ L YR G Sbjct: 376 AYDQAVANYRQTVLGAFQEVEDNLAAQRLLEQEAVVQN--DALRSAREALVLVNNRYRAG 433 Query: 408 RYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 LLD+L + + E LSIA RQ + V L A+G G++ Sbjct: 434 TAGLLDVLTAQTSAYTAERTALSIAGRQYTAAVV-LIKALGGGWH 477 >gi|66045431|ref|YP_235272.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63256138|gb|AAY37234.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 490 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 126/480 (26%), Positives = 233/480 (48%), Gaps = 36/480 (7%) Query: 4 LRAIFSLFIV----LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWE 54 +R I + +V LL+GC VGP+Y +P PL + + NI + WW+ Sbjct: 1 MRPICTYVLVMSTGLLSGCAVGPDYQRPDAPLADRYLT--QPRGAANITAHPPVSAAWWD 58 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFI- 109 F+D L+ V AL QNL + QA+ ++ A+ + A L PS + + +H+ + Sbjct: 59 GFDDPLLSSFVSRALAQNLDLAQASAQLAQARAGADAATAALLPSGNIDAQTARAHQSVE 118 Query: 110 ----------PNLK--TNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 P NS L + W++D+FG +R +++LA ++ A V A+L Sbjct: 119 TPLGQVLNSAPGYDRYGNSYEANLTASWELDVFGGLKRSRQAALAEYQASQAGVVAARLA 178 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V ++ +YI+ R + R++I ++ L + +E L +G + + ++EAE+ + Sbjct: 179 VAARTADTYINIRGLQARLAITNRQLKTRQDLLEKVQLLHERGLSPDYEVRQIEAELLQV 238 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ +P L+ ++ + +LG P H P+ + G PADL+R R Sbjct: 239 QATVPILQTGLDAAMNALDVMLGVPPGT--HRGSLAETGRIPHAPELTSTGTPADLLRRR 296 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLY 331 PD+ E++LA S A+IG+A S+ YP LSL+ + A++ N F G + + L Sbjct: 297 PDLIVAERRLAASNARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGILGLR 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD G++ + I +A+ E ++++VL A ++VENA +S+ + L Sbjct: 357 WRLFDFGRVNARISQAKGQEAEALAAYRQSVLRATEDVENAFSSLASRETQAAMLGKGET 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + S +Y +G SL+++L + +V + A+ + A++ V ++ A+G G+ Sbjct: 417 ALASARQSSFASYSKGAASLIEVLRADEKMLQVADAKAQAQVESAQAAVAVFKALGGGWQ 476 >gi|1200113|emb|CAA64891.1| mtrE [Neisseria gonorrhoeae] Length = 467 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 14/445 (3%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P+Y +P + + T F S + I L W + F D L KL+ IAL++N + Sbjct: 18 LSACTMIPQYEQPKVEVAET-FQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTS 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDSDWKIDL 128 + A ++ + R +L P+ A+ + +L + G + +++DL Sbjct: 77 LRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDL 136 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R E++L ++ A D A L++I+ + +Y + R+ +E +S+A ++L ++ Sbjct: 137 FGRVRSSSEAALQGYFASVANRDAAHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREET 196 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + + EA I+S ++D +S + ++TL+ P E L Sbjct: 197 YNAVRIAVQGRRDFRRRPAPAEALIESAKADYAHAARSREQARNALATLINRPIPEDLPA 256 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 F + G+ ++++ +RPDIR E L + A IG A++ +PS+ L G Sbjct: 257 GLPLDKQF---FVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTG 313 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 S+ F W+F P + LPIF G K+N+ A+ Q Q + ++ V + Sbjct: 314 SVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQS 373 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A ++V NAL + + K L K+++ L + Y+ G LD+LD ER++ Sbjct: 374 AFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSA 433 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSG 449 E A+ A++ DLY A+G G Sbjct: 434 EGAALSAQLTRAENLADLYKALGGG 458 >gi|94310626|ref|YP_583836.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354478|gb|ABF08567.1| RND efflux system, outer membrane lipoprotein, NodT [Cupriavidus metallidurans CH34] Length = 516 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 119/463 (25%), Positives = 214/463 (46%), Gaps = 39/463 (8%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL GC ++ P Y +P P+ T + + T+ W E + D L L+ AL Sbjct: 35 ILLGGCISMDPAYERPAAPVRTTWSPDAAAPAITPAATIGWREFYADPELQALIGQALDN 94 Query: 72 NLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTG--------QLD 121 N + R+ + RA+ +P + A + +P N TG Q+ Sbjct: 95 NRDLRIGAARVAQSLAAYGIQRAEQYPWIGASADGTRARVPG-DLNLTGRPLISSQYQVG 153 Query: 122 ---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S W+ID +G+ R + +++L N ++ A L++I+++ +Y+ R ERI++A Sbjct: 154 VGLSTWEIDFWGRIRSLKDAALQNYLASDAAQRAVTLSIITQVAQTYLAIRELDERIALA 213 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q D +++ + + G+ SKL L ++ + + + LE+ H + L+ Sbjct: 214 KQTTDTRAESLRIFTRREQVGSASKLELTEVITLYQQARALVTQLEQDRATQSHALEVLV 273 Query: 238 GYPATEFLHYMQKQSNNFQP--------NLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 G P + +P L I+ G+P++ + NRPDI E +L Sbjct: 274 GAPV------------DVKPAIGLVNDAELMRQIDAGLPSEQLENRPDIVSAEHQLMAEN 321 Query: 290 AKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +P ++L G + + D F G + WSF P + +PIF G+++SN+ Sbjct: 322 ANIGAARAAFFPRVTLTGFAGTASADLDGLFRGGSGVWSFAPSISIPIFQGGQLRSNLDL 381 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ E +++T+ NA ++V +AL++ + V LQ + L+ + Y Sbjct: 382 AKARRVEAVAQYEKTIQNAFRDVADALSAQRWLAEQVDILQLTQAAQAERRRLAKLRYDN 441 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++LD ER +E ++R L S V LY A+G G Sbjct: 442 GAAAFLEVLDAERDLLAIEQQAVQSRRALLASRVSLYAALGGG 484 >gi|319761175|ref|YP_004125112.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|317115736|gb|ADU98224.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] Length = 481 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 116/456 (25%), Positives = 219/456 (48%), Gaps = 21/456 (4%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSI-GN-----SKNLINIDTLKWWESFN 57 RA+ L I LLAGC+ P+Y +P P+ P F++ GN ++ +ID W + F Sbjct: 13 RALSPLVIAALLAGCSFIPKYERPAAPV-PEAFALAGNDVPATARAAADID---WKDYFT 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS- 116 D L +L+ IAL N + A + A+ RA FP+ A S P++ Sbjct: 69 DPRLQRLIGIALGNNRDLRVAMLNVEQARAQFQIQRAGQFPTVNAIASGTRQPSIVNGQY 128 Query: 117 -----TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G S W+ID FG+ + E +LA + A++++++ + ++ Sbjct: 129 ANQFQAGLGISAWEIDFFGRIGALKEQALAQFLATEEARKSAQISLVAAVASGWLTLMAD 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + I+ + L+ +++++L+ L+ G +S+L + E+ ++ + ++ ++ Sbjct: 189 EELLDISRRTLETREESVKLTRLRLEHGVSSELDSHQAESLAQAARATYAQQQRQRLLDE 248 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LLG P + + P+ G+P+DL++ RPDIR E+ L + A Sbjct: 249 NALALLLGQPLPDDIRASLPSMRLADAAPMQPLPAGLPSDLLQRRPDIRQAEQLLIGANA 308 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL GS++ F + +S P+L LPIFD G+ ++ + A Sbjct: 309 NIGAARAAFFPRISLTAQFGSVSDELSGLFKSGSWAFSLAPQLALPIFDAGRNQAGLESA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++++ A +EV +AL ++ + + + K + LS + YR G Sbjct: 369 RAGREIAVAQYEKSIQTAFREVSDALAGQATLQQQIDAQRAQTQADAKRLDLSDLRYRNG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 S LD+LD +R+ E L + Q ++ V LY Sbjct: 429 VASYLDLLDAQRSLYATEQALVQTRLQQLQNQVTLY 464 >gi|148557545|ref|YP_001265127.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148502735|gb|ABQ70989.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 464 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 26/468 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESF 56 M R + L + +LAGC++ P Y P P P F + + WW +F Sbjct: 1 MRAERGVAMLALAMLAGCSMAPAYRPPQTPA-PESFKEVEGWAAATPMDGAPRGDWWTAF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT 114 +D L+ L+ A + + T+ A R N A+ ADLFP ++ A + + + Sbjct: 60 DDPVLDDLIARAARASPTLEAALARYNQARAAARIESADLFPQIAAGADAGRQRVSGNRF 119 Query: 115 NSTGQLDS----------DWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPS 163 N G + D+++DL+G+ R+ + A + A+L++ + + + Sbjct: 120 NGNGTAQTYDQYTVGATLDYEVDLWGRIRNGARAARADAEASGDDLASARLSLQTAVADA 179 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R ++ Q +D + K +L+ + G S + + + + + + I + Sbjct: 180 YARLRGLDAEAALLRQTVDAFGKAYDLTAKRHNGGIASGIDVNRARTVLDNARAQISAIA 239 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H I+ L+G A++F ++ Q P L + G P+ L++ RPDI E+ Sbjct: 240 NQRAATEHEIAALVGAVASDFAIPVRDQ-----PLLSPAMPSGAPSALLQRRPDIAAAER 294 Query: 284 KLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKI 340 ++ + A+IG+A++ +P+L+L G TH F N W GP L +FD G+ Sbjct: 295 RMFAANARIGVARAAFFPTLTLGLAGGWQTTHGELFAAPNGFWGLGPASALLSLFDGGRR 354 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+ +R + + E ++ TVL A +EVE+AL + + + + A +++ L+ Sbjct: 355 KAGVRLSRAEYDELAADYRGTVLTAFREVEDALAASRHLADQIAQQRSAATAAERTSQLA 414 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + YR G L+++ + L A+ Q ++ V L A+G Sbjct: 415 LTRYRDGAADYLEVVTAQTDALDARRALLSAETQRMRASVALVRALGG 462 >gi|148360025|ref|YP_001251232.1| outer membrane efflux protein [Legionella pneumophila str. Corby] gi|296108154|ref|YP_003619855.1| outer membrane efflux protein (RND multidrug efflux) [Legionella pneumophila 2300/99 Alcoy] gi|148281798|gb|ABQ55886.1| outer membrane efflux protein (RND multidrug efflux) [Legionella pneumophila str. Corby] gi|295650056|gb|ADG25903.1| outer membrane efflux protein (RND multidrug efflux) [Legionella pneumophila 2300/99 Alcoy] Length = 517 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/470 (23%), Positives = 216/470 (45%), Gaps = 25/470 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ + L ++L+ C VGP + +P + + WW+ FND +L Sbjct: 1 MLKILALLSCLILSSCLVGPNFKEPKKDAANYWLTSSPAIKQSAFQNANWWKVFNDPTLT 60 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FI 109 L+ NL++ A R+ A+ + +L+P A + Sbjct: 61 VLIDNGYHNNLSLQMAGVRVLQARAQLAQSVGELYPQQQAMVGDYNYNRIGGNQLEGLLP 120 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T S G + W++D +G+ RR I+S+ A ++ A D A + + S + ++I R Sbjct: 121 PDFLTASLG-FSASWELDFWGKYRRAIQSNDALFLASLAAYDSALVTLTSDIASTFIKIR 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E I + + + +++++ +++ G TS L + + E+ ++ +P + Sbjct: 180 TSEELIKVTKANIQVQAMSLKIAKDRYSGGQTSLLDVEQAATELAETQAKLPQYVSDLQH 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG + ++K N P + +GIP ++I RPD+ + Sbjct: 240 QKDILAVLLGTTPDKVDDLLKK--NKGIPKASAVVEVGIPKEVIARRPDVYQARMEAIAQ 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKI 340 A IG K++LYPSLSL G+ +N F N + GP L + + G+I Sbjct: 298 SAAIGAVKANLYPSLSLVGTFVFASNNIGSSTISDIFDWSNRNIVAGPSLTWSLLNYGQI 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R +++ Q+ + + VL +EV++ +T E +K V+ L+ A +S L+ Sbjct: 358 TNAVRAQDAAFQQALLNYLNLVLKVQQEVQDNITRYVEGQKTVSSLKTANASAIESTRLA 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y++G + +L+ E+ +V+ L A +LA S V LY ++G G+ Sbjct: 418 LVRYKEGEANYTTVLNAEQQQLRVQTSLVNATGELALSLVGLYRSLGGGW 467 >gi|319764718|ref|YP_004128655.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|317119279|gb|ADV01768.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] Length = 490 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 116/455 (25%), Positives = 206/455 (45%), Gaps = 33/455 (7%) Query: 17 GCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GCT + P Y P MP+ P +++ W + F D L L+ AL+ N + Sbjct: 30 GCTTLAPPYEAPAMPV-PQRYAGAAEPGGAVAAATAWRDYFTDPQLQALIVQALEHNRDL 88 Query: 76 LQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTN-STGQLDSD 123 A R+ A+ A+L P+ + A +S P + + G + Sbjct: 89 RTAALRVQEARAAYGIQSAELSPAVGAQANMDRARTPADLSLTGRPMVASQYQVGLGMAS 148 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID +G+ + + +++L N ++ A +++I+++ Y+ R ER+++A Q Sbjct: 149 WEIDFWGRVQSLRDAALENYLASDAARHAVTVSLIAQVAGGYLALRELDERLTLAEQSSA 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG---- 238 ++++ +S + G+ S+L L +++ + ++ + L H + L+G Sbjct: 209 SREESLRISRRRVEVGSDSRLHLTQMQTLLTQAQALVAQLSLERARQAHALGQLVGSGVA 268 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 PA L Q P L G+P+DL+ RPDI E +L + A+IG A++ Sbjct: 269 LAPAAGRLAEQQ------MPRL----AAGLPSDLLAQRPDIVAAEHQLRAAHAQIGAARA 318 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS+SL G+ F G + W+F P + LPIF G++K N+ AE Sbjct: 319 AFFPSISLTGAFGTASAELGGLFEGGSRAWTFSPSITLPIFSGGRLKGNLALAEVRRDLA 378 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TV A ++V +AL ++ Q A+ + + LS + Y G + LD+ Sbjct: 379 VANYEKTVQQAFRDVSDALAGRQWLERQSRIAQEALAVQTERARLSQLRYDHGAAAFLDV 438 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD +R + A+R L S V LY A+G G Sbjct: 439 LDAQRDLLVAQQQTVQAQRLLLSSQVSLYAALGGG 473 >gi|302186584|ref|ZP_07263257.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 490 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 125/480 (26%), Positives = 229/480 (47%), Gaps = 60/480 (12%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIA 68 LL+GC VGP+Y +P PL P ++ + + NI + WW+ F+D L+ V A Sbjct: 15 LLSGCAVGPDYRRPDAPL-PDRY-LTQPRGAANITAHPLVSAAWWDGFDDLLLSSFVSRA 72 Query: 69 LQQNL---------------------------TILQATERINAAKENILSVRADLFPSSY 101 L QNL I T R + + E L + P Y Sbjct: 73 LAQNLDLAQASAQLAQARAGADAATAALLPAGNIDAQTARAHQSVETPLGQVLNSAPG-Y 131 Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + + NL + W++D+FG RR +++LA ++ A V A+L V ++ Sbjct: 132 DRYGNSYEANLTAS--------WELDVFGGLRRSRQAALAEYQASQAGVAAARLAVAART 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI R + R++I + + + +E L + +G + + + ++EAE+ +++ +P Sbjct: 184 ADTYITIRGLQARLAITRRQVQTRQDLLEKVQLLYERGLSPEYEVRQIEAELLQVQATVP 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDI 278 L+ ++ + +LG P + + P + P + G PADL+R RPD+ Sbjct: 244 ILQTGLDAAMNALDVMLGVPPGTHRSSLAEAG----PIPHTPELASTGTPADLLRRRPDL 299 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPI 334 E++LA S A+IG+A S+ YP LSL+ + A++ N F G + + L + Sbjct: 300 IVAERRLAASNARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGVLGLRWRL 359 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI---NEDKKIVTKLQHAVE 391 FD G++ + I +A+ E ++++VL A ++VENA +S+ I+ K + A+ Sbjct: 360 FDFGRVNARIGQAKGQEAEALAAYRQSVLRATEDVENAFSSLANRETQAAILDKGEAALA 419 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S S +Y +G SL+++L + +V + AK + A++ V ++ A+G G+ Sbjct: 420 SARQS---SFASYSKGAASLIEVLRADEKMLQVADANAQAKVESAQAAVAVFKALGGGWQ 476 >gi|300718172|ref|YP_003742975.1| RND efflux system, outer membrane protein [Erwinia billingiae Eb661] gi|299064008|emb|CAX61128.1| RND efflux system, outer membrane protein [Erwinia billingiae Eb661] Length = 470 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 116/466 (24%), Positives = 221/466 (47%), Gaps = 24/466 (5%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 L A+ +++L+GCT+ P Y +P +P+ G + D + W F D +NK Sbjct: 8 LAALPMAMMLVLSGCTMEPTYQRPALPVAADYGQQGKDRAGNGAD-ISWQNFFTDPVMNK 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL-KTNSTGQ 119 L+ ++L+ N + A ++ A+ + RA L PS S + + NL T STG Sbjct: 67 LIALSLENNRDLRVAALNVDVARSQVQIDRAALLPSVDLSASQTAAHLPGNLYNTASTGP 126 Query: 120 LD----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + W++D FG+ R + + +L + + A ++++IS++ Y+ Sbjct: 127 VTYHELNTSLGVTAWELDFFGRLRSLRDQTLESYLATAATQRATQISLISEVASGYLSLC 186 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E + +A + + + L+ G +S+ LV+ E +++ ++D+ + + R Sbjct: 187 ADNELLKLAMDTVKSQQDSYNLTKRSVDGGVSSEQDLVQAETSVRTAQADVASYTRQVRQ 246 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLAD 287 +V+ ++ L+G T M + N + P G+P+DL+ RPDI E +L Sbjct: 247 DVNALALLVG---TNLPSDMLANAR-LNKNWHFPATPSGLPSDLLTRRPDIIAAEHELKA 302 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +PS+SL S T + G WSFGP + LPIFD G +N+ Sbjct: 303 ANANIGAARAAFFPSISLTASGGSTSSSLGHLLEGGTAAWSFGPSINLPIFDGGVNSANL 362 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A + + +++++ A KEV +AL + K +T + + ++++ + I Y Sbjct: 363 DIAHLQKRIEIADYEKSIQTAFKEVGDALAGQDTYKDELTAREQDEQANQRNYDFAHIRY 422 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +QG + L++L +R+ + L + + LY A+G G+ Sbjct: 423 QQGVDNYLNVLVAQRSLYAAQQSLITTQLGRLNQQITLYKALGGGW 468 >gi|229591441|ref|YP_002873560.1| putative cation transport lipoprotein [Pseudomonas fluorescens SBW25] gi|229363307|emb|CAY50420.1| putative cation transport lipoprotein [Pseudomonas fluorescens SBW25] Length = 476 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 219/456 (48%), Gaps = 26/456 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 +L+GC++ P+Y +P P+ P Q+ + W + F+D +L +L++ AL N Sbjct: 4 MLSGCSLIPDYQRPQAPV-PVQYPQQGVYAQAQAGSADWQQLFHDPALQQLIRDALVNNR 62 Query: 74 TILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD---------- 121 + A + A + RADLFP S+ + R +P N TG+ Sbjct: 63 DLRVAALNVEAFQAQYRIQRADLFPAVSATGAGQRRRLPG-DVNGTGKPAITSSYSATLG 121 Query: 122 -SDWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 S +++D FG+ R + ++ L L + A+ A+L++++ + +Y+ R +E +++A Sbjct: 122 ISAYELDFFGRVRSLSEQAMLTYLGTEEARRS-AQLSLVANVANAYLTWRADQELLALAQ 180 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q L ++ L+ T G S L +V+ ++S + + E+ +++N++ L+G Sbjct: 181 QTLVANDHSLRLTSRSKTAGKASALDVVQARTSVESTRASVARYERQVAQDLNNLALLVG 240 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P E Q + + + G+P+DL++ RPDI E +L + A IG A++ Sbjct: 241 GPVDE-----QLPARPLAADWVARVPAGLPSDLLQRRPDILQAEYQLRAANANIGAARAA 295 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS+SL GS + F G + W+F P++ LPIF+ G +++++ A+ Sbjct: 296 FFPSVSLTANAGSASTELSGLFKGGSGSWTFQPQINLPIFNAGSLRASLDYAKLQKDISV 355 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++++ A +EV + L + + + V +++ L+ YR G S L L Sbjct: 356 AQYEKSIQTAFQEVADGLAARQTFIDQLDAQRDFVAANQQYYKLAEHRYRSGVDSNLTFL 415 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +RA + L + + + V+LY A+G + Sbjct: 416 DAQRALFSSQQALIVDRLAQLVAEVNLYTALGGAWG 451 >gi|73537914|ref|YP_298281.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72121251|gb|AAZ63437.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 517 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 214/469 (45%), Gaps = 30/469 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTL--KWWESFNDTS 60 + L L A TVGP+Y P + + +G++ ++I + WW+ +ND Sbjct: 9 LMPLVPALFACTTVGPDYHLPDTAAVRAPEANGKLLGSANPAVSIGPVPDAWWQLYNDPR 68 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASIS 105 L++LV+ AL N I A+ + A + V A+ P SY + Sbjct: 69 LDRLVREALAANTDIRVASANLRRATAALHEVEAENLPQGGISASVSRAQLSGQSYLQTT 128 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + NL G + ID FG+ R E++LAN+ ++ A +D A++ V ++ + +Y Sbjct: 129 KPPVFNLGDFGPG---VSYLIDFFGKLARADEAALANMQASEAALDAARVGVAAQTVRAY 185 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + +A + L ++ ++ + + G V+ +A ++++ + +P L Sbjct: 186 VQGCAASHELEVARHQIALQERAVDATRRLASAGRAEPTDTVRAQARVEALRAALPPLAA 245 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + ++ +LG P + + +P L P+ +G A L++ RPDIR E++ Sbjct: 246 AREAAGFRLALVLGKPPAAL--PAEDIECHEEPPLTQPLPVGDGAALLKRRPDIRQAERE 303 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 LA + AKIG+A +DLYPS+ + S LT + G WS GP L F ++ Sbjct: 304 LAAATAKIGVATADLYPSIRIGASAGLTGLLSDLGSGPTVRWSIGPMLSW-NFPTNGVRP 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I R E+ A + VL A++E E AL++ + + LQ A + ++ Sbjct: 363 RIARMEAGADAALAHFDGVVLRALQETETALSAYARELERQHALQLARDQAVEAARQERR 422 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y GR L LD ER A E L+ + +A +DL++A+G G+ Sbjct: 423 RYEAGRTPYLARLDAERTLADAEAALAESDSLVAMRQIDLFLALGGGWQ 471 >gi|107022848|ref|YP_621175.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686910|ref|YP_840157.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105893037|gb|ABF76202.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652625|gb|ABK13264.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 486 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 116/463 (25%), Positives = 220/463 (47%), Gaps = 32/463 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P QF ++ + D WW F D L + + +AL QN Sbjct: 18 GCAVGPDYARPDVAM-PRQFQGQRAVDQRHAAADADLATWWTGFGDPQLTRYITLALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T N+T D Sbjct: 77 LDLAQAAARVAQARAGLGAANAALLPSGNVSGQAARVYQSVETPLGQVLNATPGFDRHGN 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ +YI R + R Sbjct: 137 DYEADFNASWELDIFGGLRRGREAALADYQASEAAAVATRLAVAAQTADTYITIRGLQGR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + +L + +G ++L + + E + + + +P LE + ++ + Sbjct: 197 LEVARHQVQTEQDLLSTLNLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDAAMNAL 256 Query: 234 STLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A S A+I Sbjct: 257 DVMLGAQPGTHRAELLDGGEVPVAPRI---AATGTPGELLRRRPDLIAAERRVAASNARI 313 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL G I + N F G + L +FD G+I + I +A+ Sbjct: 314 GVAIAEYYPKFSLGGLIGSATTMGAGNLFAGGANQAAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 374 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAILGDGVKSLGRARAASFAAYQKGV 433 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL+++L + + +V + A+ + A++ V + A+G G+ Sbjct: 434 VSLIEVLQADESLLRVSDERVQARTESARAAVAAFKALGGGWQ 476 >gi|189460610|ref|ZP_03009395.1| hypothetical protein BACCOP_01251 [Bacteroides coprocola DSM 17136] gi|189432686|gb|EDV01671.1| hypothetical protein BACCOP_01251 [Bacteroides coprocola DSM 17136] Length = 449 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 111/456 (24%), Positives = 226/456 (49%), Gaps = 28/456 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++ L C +G YT+P + L T S+ S + ++I W + + DT+L L++ L Sbjct: 5 LLFLGSCQLGKHYTRPKLDLPETLDSM--SVDTVSIGDYPWEQLYTDTTLQGLIRKTLSY 62 Query: 72 NLTILQATERIN--AAKENILSVRADLFPSSYASI-SHRFIPNLKTN---STGQLDS--- 122 N +L A R+ AA + I A++FP+ A + + + N N S ++D+ Sbjct: 63 NKDMLIAAARVKELAAMKRI--DYANMFPAVGAKVYAEKEAENYGGNHYKSGYEIDAKAS 120 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G R + SLA + ++++++++ +Y + +SI + Sbjct: 121 VSWELDLWGNLRWARDKSLAEFVGSVENQRALRMSLVAQVAQAYFELVALDNELSIVQKT 180 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 +D ++++ L+ +++ G TS+ + + + E+ + +P LE+ + + I+ L G Sbjct: 181 VDARRESLHLARVRYEGGLTSETAFRQAQVELARTATLVPDLERKISLKENEIAFLSG-- 238 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E+ H++++ L + +G+P+ L+ RPDIR E+ + + A +G+A ++L+ Sbjct: 239 --EYPHHIKRSVLPEDVMLSASLPVGLPSALLERRPDIRQAEQAVIAANAAVGVAFTNLF 296 Query: 301 PSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 P ++L S AL+ P + + PIF GK ++ ++ +++ ++ Sbjct: 297 PRITLTAIYGSESAALSDVLKSP----YHLLSANILQPIFAMGKNRAMLKAKKAACEQAA 352 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ VLNA K+ NA+ N+ K+I + K ++ L+ + Y G +D+L Sbjct: 353 YAYEKAVLNAFKDAYNAIAEFNKIKEIYETRLRLEQASKSTLDLAQLQYLNGVIGYMDLL 412 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R ++ LS A R S V+LY A+G G+ Sbjct: 413 DAQRGYLDAQIGLSNAVRDKQISMVNLYKALGGGWQ 448 >gi|114328794|ref|YP_745951.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] gi|114316968|gb|ABI63028.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] Length = 506 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 129/476 (27%), Positives = 230/476 (48%), Gaps = 45/476 (9%) Query: 7 IFSL-FIVLLAGCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +F L V + CTVGP++ KP + P + S++ I++ +WW SF+D L+ Sbjct: 11 VFPLSLAVFFSACTVGPDFRKPKTDIPPDWTEKHEHATSRDRISL--AEWWRSFDDPVLD 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ 119 +LV A+ NL++ A +RI A+ + A +P S S + ++ Q Sbjct: 69 RLVDDAIGNNLSLAIAQQRIIMARAERENAVAGWYPQINLSATKQSRGYSGTMQWPGLPQ 128 Query: 120 L---------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + DS W++D+FG RR +E++ A+ D+ +++IS+L Y R Sbjct: 129 IAYRYWDTTFDSSWELDIFGGTRRMVEAANASADALVEGRRAILVSLISELASQYAVLRA 188 Query: 170 FKERISI-------AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + R+ I A I+DL K + QG S L L + AE+++I++ P L Sbjct: 189 SQLRLEIVRKNEVTAQHIVDLVSKEV-------GQGIRSTLDLSQARAELETIKATEPPL 241 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDI 278 M H I L+G P L ++ QP +P+ +P +I +RPD+ Sbjct: 242 HAMIAMAAHAIGVLIGKPPGGTL-----EAELLQPTPVLPVPPALPVLLPAQVIADRPDL 296 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E+ A ++A++G+AK+ LYP + ++ T F + W G + P+F Sbjct: 297 RRVERDYAMALAQVGVAKAQLYPRFMIPIVVQPMSSTLHQLFSAASMTWMMGVGIAQPLF 356 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + + A++ A+ IT++E+VL A++EVE+AL + + ++ L A +K Sbjct: 357 DGGRRHARLTAAQAEAEAARITYEESVLIALREVEDALVNFSTAQERDKNLLEAQAQSQK 416 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ S Y G + +LD +R+ E ++I+K ++ + LY A+G G+ Sbjct: 417 ALAQSRTLYEHGLTGYMRVLDAQRSALAAEDAVAISKLDRIRNTIQLYKALGGGWQ 472 >gi|91784062|ref|YP_559268.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91688016|gb|ABE31216.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 514 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 124/468 (26%), Positives = 213/468 (45%), Gaps = 33/468 (7%) Query: 9 SLF--IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSL 61 SLF + +A C VGP+Y KP + P F G ++ + WW ++D +L Sbjct: 26 SLFASTLFVAACAVGPDYHKPPQDI-PATFKEGTDWQRAQVNPQGAISSTWWLDYHDDTL 84 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASI----SHR 107 + LV AL+ N +I A A+ I + A LFP S A++ S Sbjct: 85 SSLVNQALRANQSIASAEAAYRLARATIDANVASLFPTVGVDASGSRSRTAAVESVTSQP 144 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ NL + S + W++DL+G RR IES+ A+ ++ AQ+ +L++ + + Y Sbjct: 145 YMSNLASVSA---SASWEVDLWGSVRREIESAKASAQASDAQLAGERLSIAASVAVDYFS 201 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R I+ Q + + +E+ F QG S +++ + ++ + +++ E S Sbjct: 202 LRQADVDIASLKQQQGIDARILEMDRAGFVQGTVSNDEVLEAQDTLELVIAELQATETSR 261 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + H I+ L G P F + Q +P G P+ L+ R D+ E+ A Sbjct: 262 EQDEHAIAVLTGTPPASFA--LPPQPGYVFTTPVVPP--GFPSQLLERRYDVVSAERTAA 317 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+AK+ +P+L+L+ H+ N F N W+ GP L IFD G + Sbjct: 318 AANARIGVAKAAFFPTLTLSAQGGFEHNALANLFSVPNRFWTLGPDLAATIFDGGARSAA 377 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + AE++ EQ T++ TVL+A + VE++L+S N K + E +++ S Sbjct: 378 VHEAEATYDEQIATYRGTVLSAFQSVEDSLSSYNHLCKQEQAYANIYERNQRLFSSQQAQ 437 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S +L + + L + L +S V L +G G+ Sbjct: 438 MRAGTTSEQALLTQQITLLRAGQSLRDTQAALTESSVTLVKNLGGGWQ 485 >gi|254180085|ref|ZP_04886684.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|184210625|gb|EDU07668.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] Length = 569 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 127/519 (24%), Positives = 227/519 (43%), Gaps = 93/519 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 27 CTVGPDFHPPRADV-PAQWHDVTATSTSSASSAASPPAAGSGAPNAGAPPRSLPTVEADP 85 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 86 DPRWWRTFGDPMLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQR 145 Query: 107 -----------------------------RFIPN----LKTNSTGQLD------------ 121 R P L+ + LD Sbjct: 146 EQLGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 205 Query: 122 --SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 206 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 265 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 266 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 325 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 326 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 383 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 384 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 439 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 440 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTAFELARDSYRHGLVSF 499 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 500 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 538 >gi|300718168|ref|YP_003742971.1| RND efflux system, outer membrane lipoprotein [Erwinia billingiae Eb661] gi|299064004|emb|CAX61124.1| RND efflux system, outer membrane lipoprotein [Erwinia billingiae Eb661] Length = 466 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 213/465 (45%), Gaps = 33/465 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLKWWESFNDTSLNKLV 65 L ++L+GC VGP+Y +P + P+Q+ +K WW ++D SL L+ Sbjct: 10 LLALILSGCAVGPDYHRPTASV-PSQYKEAKGWQQAKPQDADSKGAWWAVYHDESLAGLL 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------- 118 + N + Q + A+ + R+DLFPS + + + +TG Sbjct: 69 QQVSISNQNVAQYEAQYRQAQALVSGSRSDLFPSVTGTGASTRSGSASNTTTGSGRTVSN 128 Query: 119 ----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + + W++D++G+ RR +E + A+ ++ A++ L+ S+L Y R ++ Sbjct: 129 SHSLEASASWELDIWGKLRRTLEENKASAQASAAELANITLSAQSELAQDYFQLRIMDQQ 188 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I++ Q +D Y++ +++ K+ G+ S+ +L + +A+++S + L H I Sbjct: 189 IALYQQSVDAYQRYLKVIDNKYQSGSESRATLAQAQAQLESARASALDLTWQRAQTEHAI 248 Query: 234 STLLGYPATEFLHYMQKQSNNF--QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+G EF + PN +P++L++ RPDI Y E+ +A + A Sbjct: 249 AMLIGKTPAEFSLPAAPLTATLPTTPN-------ALPSELLQRRPDIAYAERTVASANAA 301 Query: 292 IGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +G+A + YP L+L + + S P N WS GP+L + D G + + + Sbjct: 302 VGVAIAGYYPDLTLGATGGFSSSTFSNLLSLP--NRVWSLGPELSGTLLDFGGTSAKVDQ 359 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A ++ ++++ VL +EVEN L +N + + Q A + K+S ++ Y+ Sbjct: 360 ARAAYDADVASYRQAVLTGFQEVENYLVELNTLQDEMLAQQRATDAAKESARVTYNQYQA 419 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LD+ E + + L + + V L A+G G+ Sbjct: 420 GMIDYLDVATTENTSLSSQQSLLSLQSTQWVASVQLIAALGGGWQ 464 >gi|167919316|ref|ZP_02506407.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei BCC215] gi|254297921|ref|ZP_04965374.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|157807421|gb|EDO84591.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] Length = 569 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 63/458 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 88 RWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQREQ 147 Query: 107 ---------------------------RFIPN----LKTNSTGQLD-------------- 121 R P L+ + LD Sbjct: 148 LGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAGFD 207 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A + Sbjct: 208 ASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAVAL 267 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 268 ADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLGD- 326 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Y Sbjct: 327 APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQFY 385 Query: 301 PSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P +SL G + TH HWS FGP + LPIF+ G + +N+R +++ + Sbjct: 386 PDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQAQ 441 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S +D Sbjct: 442 AALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSFID 501 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ER ++ QL V LY A+G G+ Sbjct: 502 VLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 539 >gi|254197575|ref|ZP_04903997.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|169654316|gb|EDS87009.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] Length = 566 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 127/519 (24%), Positives = 227/519 (43%), Gaps = 93/519 (17%) Query: 18 CTVGPEYTKPHMPLLPTQF--------------------------SIGNSKNLINIDT-- 49 CTVGP++ P + P Q+ + ++L ++ Sbjct: 24 CTVGPDFHPPRADV-PAQWHDVTATSTSSASSAASPPAAGSGAPNAGAPPRSLPTVEADP 82 Query: 50 -LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 83 DPRWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQMRAAAAQGLPDVRASASYQR 142 Query: 107 -----------------------------RFIPN----LKTNSTGQLD------------ 121 R P L+ + LD Sbjct: 143 EQLGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAG 202 Query: 122 --SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 203 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 262 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 263 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 322 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 323 D-APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 380 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 381 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 436 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 437 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 496 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 497 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 535 >gi|303256231|ref|ZP_07342247.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderiales bacterium 1_1_47] gi|331001289|ref|ZP_08324915.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Parasutterella excrementihominis YIT 11859] gi|302860960|gb|EFL84035.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderiales bacterium 1_1_47] gi|329569016|gb|EGG50812.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Parasutterella excrementihominis YIT 11859] Length = 467 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 109/454 (24%), Positives = 214/454 (47%), Gaps = 15/454 (3%) Query: 7 IFSLFIVLLAGCTVGPEY--TKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDTSLNK 63 I SL L+GC P++ T+ ++P Q+S + K D +WW +++D + + Sbjct: 8 ILSLLFGALSGCVSIPQFQITEQDKKVIPDQWSGSPALKATKAADLSEWWSTWSDPEIAR 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SY-ASISHRFIPNLKTNSTGQ 119 LV + N + A E + A+ ++ A LFP+ +Y AS SH S G Sbjct: 68 LVAASQAANTDVRSAQENLRYAQASMTVANAGLFPTLDGNYRASRSHSLGHGSNAFSIG- 126 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 L+ W ID G+ E++ ++ S+ A + + + +++ +Y++ R ++R+ +A + Sbjct: 127 LNVSWTIDAGGRFAASEAAFSDYLSSQASLGDVQTRIAAEVARAYVNMRLAQKRLDVAQE 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ +++++ ++ G + + + + IP +R V L+ Sbjct: 187 NAKTQQEALDIANWRYLSGLVPSTDVDQARTSFEQTRASIPV----YRAQVMQYRNLIAR 242 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + S P + + IP + +RNRP +R E K+ ++A+ AKS L Sbjct: 243 LIGTTPEAVNPTSTAPIPQPPRNLALNIPGETLRNRPAVRMAEAKVMSALARYAQAKSAL 302 Query: 300 YPSLSLNGSIALTHD--NSFPGYNTHWSFG-PKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PSLS+ GS L+ + TH S G L LPIF+ G + + + + ++ A + I Sbjct: 303 FPSLSIGGSFGLSGSIMGQLGEWGTHNSNGFGSLTLPIFNAGSLMAQVEQRDAQAAQAKI 362 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ ++L +++VE+AL + + L A E + + + + NY G +L Sbjct: 363 DYEASLLTGVQDVEDALNKVWSQETRKKSLVVADESARNAATAARQNYSAGLQDFTVVLT 422 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R V+ L+ + ++A+ Y+DLY A+G G+ Sbjct: 423 TQRTLLTVQESLASVEAEIAQGYIDLYTALGGGW 456 >gi|332094235|gb|EGI99286.1| cation efflux system protein cusC [Shigella boydii 5216-82] Length = 460 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------ST 117 + AL N + AT ++ A+ AD +P S + NLK N ST Sbjct: 67 ISEALVNNRDLRMATLKVREAQAQYRLADADRYPQLSGEGSGSWSGNLKGNTATTREFST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD+ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDVERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|212702522|ref|ZP_03310650.1| hypothetical protein DESPIG_00540 [Desulfovibrio piger ATCC 29098] gi|212673963|gb|EEB34446.1| hypothetical protein DESPIG_00540 [Desulfovibrio piger ATCC 29098] Length = 628 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 113/466 (24%), Positives = 232/466 (49%), Gaps = 30/466 (6%) Query: 5 RAIFSLFIVL----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 RA L + + L GCT+GP++ + + + P F G WWE F+D Sbjct: 167 RAALCLLLAVGLSGLGGCTLGPDFKRADVDV-PENFLPGTLAGTGAPLRPSWWEDFHDPL 225 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTNS 116 L LV A + +L++ QA +R+ ++ + RA+ P + + S + P+ + Sbjct: 226 LTALVLEAQEGSLSVRQAVQRVAQSRAARMEARAEFLPDATGAGELARSRNYAPD---GT 282 Query: 117 TGQLDSDWK----IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +LD+ + +D+FG RR +E++ A+L++A + A+ ++ ++ Y+D R + Sbjct: 283 ATKLDASVQLALAVDVFGGLRRSLEAAGADLEAAGISLADARASLAVEVATGYVDLRLAQ 342 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++ IA + + + + + + + G + L L A++++ ++ +P+ E + Sbjct: 343 EKLRIALENVAVQRDTVRIIQARADAGTVAMLDLHAARAQMETTQASVPSAEAEVVSAIR 402 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLAD 287 + L G F + +++ P IP + +P+DL+R RPD+R E + Sbjct: 403 GLEALAGRNPGMF----DARLSSYGP---IPELRSLPSAVPSDLLRRRPDVRKAEAEHHA 455 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A+IG+A++ +PS SL GS A+T + S+ GP + IF G+ ++ + Sbjct: 456 ATARIGVAEASFFPSFSLVGSGAVTSSDFVSWSEAMKSLGAGPMVNWNIFSFGRTQAAVD 515 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A ++A E + +++TVL A+ +VE + ++ ++ + L+ A + ++++ LS Y Sbjct: 516 QARAAAAEAALVYRQTVLEALHDVETSWSAHEKESRREDGLRAARDHQRQALLLSRDLYA 575 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G+ LD+L + ++ E + + + +AK V L A+G G+ Sbjct: 576 GGKGDYLDVLTAQASSLSAETEYASHRAAMAKDAVALIRALGGGWT 621 >gi|78062578|ref|YP_372486.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77970463|gb|ABB11842.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 509 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 128/470 (27%), Positives = 224/470 (47%), Gaps = 49/470 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------IDTLKWWESFNDTSLNKLVKIA 68 GCTVGP+Y +P + P + + + + + +D WW +F D L+ L A Sbjct: 26 GCTVGPDYKRPDVDT-PAAWRLDPADSYWHPAAPASAPLDP-AWWTAFGDPQLDALEAEA 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNLKTNSTGQL 120 L+ N + R + AK + SV + +P+ + S RF N T ST + Sbjct: 84 LRNNQNLKAVAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNYATQSTSTV 143 Query: 121 DSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +D +++DLFG+ RR +ES+ A + A A+L + + L SY R F Sbjct: 144 QNDVQVGAAVSYELDLFGRVRRSVESAQATTEQAGDDFANARLVLTADLASSYFALREFD 203 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + + +DL +K ++ + GA S L L++ A++ + + L + R+ V Sbjct: 204 TEIDVVKRSIDLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLLQQ-RVQVE 262 Query: 232 N-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKL 285 I+TL+G PA F + P + +PIN G+P+D+++ RPD+ E+ + Sbjct: 263 TAIATLVGTPAPAF---------SIAPRV-VPINAPALPTGLPSDVLQRRPDVASAERAM 312 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIK 341 A + A+IG+A++ +P + L+ I F G T WS G L P+F+ GK+K Sbjct: 313 AAANAQIGVARAAYFPRIMLSPDIGWDA-TRFAGLFTVPALLWSVGGSLSQPLFEGGKLK 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A++ ++++TVL A +EV+NA+T ++ + AV+ +K +SL+ Sbjct: 372 AGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLADAAQQASAAVDDARKLVSLAQ 431 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 432 DRYAGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 481 >gi|15598717|ref|NP_252211.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|9949669|gb|AAG06909.1|AE004772_7 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|25137489|dbj|BAC24098.1| putative outer membrane efflux protein [Pseudomonas aeruginosa] gi|68533168|dbj|BAE06009.1| outer membrane protein OpmE [Pseudomonas aeruginosa] Length = 491 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 221/461 (47%), Gaps = 29/461 (6%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LL GC VGP+Y P + ++ + ++ ++WW F++ +L L++ AL Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGSGVE-IEWWRGFDEPALESLIQRALA 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST---------GQ 119 NL I A R++ AK + R + P + + R ++T + G Sbjct: 71 ANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDIETYRGA 130 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD+ W+IDLFG+ RR +E++ A S A + + +V + + S+ + + +++ H Sbjct: 131 LDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMSWFQLQGIEAELAVVH 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + ++ LL Sbjct: 191 DIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNALAVLLA 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 F + + S L + + +G PA L+ R DI E+ LA + A+IG+ + Sbjct: 251 EAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATARIGVETA 307 Query: 298 DLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 LYP + + GSI L D S +N P + + D+G++ + I +E+ A Sbjct: 308 GLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVWARIAASEARA 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I + TVL A++E ++A ++ +L A ++++ L+ + QG Sbjct: 365 QEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERFVQGDGE 423 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 424 YLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|323967517|gb|EGB62933.1| NodT family protein efflux transporter [Escherichia coli M863] Length = 460 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 126/460 (27%), Positives = 224/460 (48%), Gaps = 30/460 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 F V LA GC++ PEY +P MP+ P QFS+ + + +D + W F D + L+ Sbjct: 9 FCVALALTGCSLAPEYQRPAMPV-PQQFSLSQNGLVNAVDNYQNAGWRTFFVDNQVKTLI 67 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TG 118 AL N + AT ++ A+ AD +P S + NLK +S TG Sbjct: 68 SEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG 127 Query: 119 QLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ I Sbjct: 128 -LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQI 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L Y+++ + G+++ L+L + I+S SDI + + + L Sbjct: 186 AEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + Q Q+ N + + G+ + ++ RPDI E L + A IG A+ Sbjct: 246 LG----NYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAAR 301 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ Sbjct: 302 AAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQ 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L+ Sbjct: 362 SVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLE 421 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ A RQ+ + V LY A+G G+ Sbjct: 422 VLDAERSLFATRQTLLDLNYA-RQVNE--VSLYTALGGGW 458 >gi|33602829|ref|NP_890389.1| outer membrane component of multidrug efflux system [Bordetella bronchiseptica RB50] gi|33577271|emb|CAE35828.1| outer membrane component of multidrug efflux system [Bordetella bronchiseptica RB50] Length = 487 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 114/451 (25%), Positives = 208/451 (46%), Gaps = 24/451 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTLK--WWESFNDTSLNKLVKIALQQNLT 74 C VGP+Y P P + + + L + D L+ WW D L+ L+ +AL +NL Sbjct: 25 CAVGPQYQAPT----PAPVKLASPEQALFSADRLQREWWRQLQDARLDALIGLALARNLD 80 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH-----RFIP-----NLKTNSTGQLDSDW 124 I QA R+ A+ + D +P+ A+ + + P NL + D+ W Sbjct: 81 IRQAQARLREARAALDEKELDRWPTVTAAGGYTRSLSQINPGPDQRNLAQSYRAGFDATW 140 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDI-AKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +IDLFG+ + + A D A A +L V+++L +Y + R ++R+++A L Sbjct: 141 EIDLFGRLQRRAEAAAARDQAAAADLAQTRLVVVAELARNYFEMRGAEQRLAVARANLAT 200 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + ++ G L AE+ + + LE R+ + I+ L E Sbjct: 201 QQETLRVTAALVETGRGYAGDLASARAELAGTRALLAPLETQRRLAQYRIAVLAAMRPAE 260 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 Q+Q P L + IG A L++ RPD+R E+ LA + A +G ++LYP + Sbjct: 261 LGELRQEQP--LAP-LAAQLPIGDVAMLLQRRPDVRAAERLLAATNADVGAITAELYPRI 317 Query: 304 SLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L G IAL + + ++ P + P G +++ +R ++ +++ Sbjct: 318 DLGGFLGFIALRGGDLGQASSKAFALAPTISWPALHLGSVQAQLRAGQARHDAARARYEQ 377 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 L AI+EVE ALT ++++ + L + +++ L+ YR+G L +LD +R Sbjct: 378 VALQAIEEVEGALTRYGQNQQRLRDLLDSATQSQRAADLAQTRYREGAAPYLTVLDAQRT 437 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++ ++ + S V LY A+G G+N Sbjct: 438 LLRAQDAVAQSESESYTSLVALYKALGGGWN 468 >gi|94497996|ref|ZP_01304560.1| probable outer membrane drug efflux lipoprotein [Sphingomonas sp. SKA58] gi|94422579|gb|EAT07616.1| probable outer membrane drug efflux lipoprotein [Sphingomonas sp. SKA58] Length = 470 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 121/476 (25%), Positives = 225/476 (47%), Gaps = 35/476 (7%) Query: 1 MNILRAIFSLFIVL-LAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWW 53 M ++A+ ++ + L LA C + P+Y +P +P+ P G I +T W Sbjct: 1 MRSIKALSAVTLSLALAACDMAPKYVRPDLPVPVESPQGPAYAETGEGVAAIPAET-AWR 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PN 111 + F D + ++++ AL N + A + A+ RADLFPS AS + + P Sbjct: 60 DFFTDPRMVRVIETALTNNRDLRIAVANVAQARAQYRVQRADLFPSVNASGTATYSEQPL 119 Query: 112 LKTNSTGQLDSD----------WKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVIS 158 ++ T +L++D W+IDLFG+ R++ S A L+ +A + A+ ++++ Sbjct: 120 VQFGQTQRLNNDVYQAQVGISAWEIDLFGRVRNL--SKAALEQFFATDENRKAAQTSLVA 177 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +++ +ER+ IA ++ + K + L+ +F +G S+L + + + SD Sbjct: 178 ETANAWLVMAADQERLRIARELEGAFGKTLALTKARFERGIASELEVRQAQTSYDQARSD 237 Query: 219 IPTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I + + ++ L G PA++ + + + +P NI +D++ RP Sbjct: 238 IAEATTLVAQDQNALNLLAGTTVPASDLPDSLTPEGATLE---NLPANI--TSDVLLQRP 292 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DI E +L + A IG A++ +P++SL GSI+ N F + WS P LP Sbjct: 293 DIASAEHQLRAANANIGAARAAFFPNISLTAAFGSISQGLSNLFGSGSDFWSVAPSANLP 352 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ + N+R A ++ T++++V +EV +AL ++ + + Sbjct: 353 IFDFGRNQGNLRYARATYDAMVATYEKSVQTGFREVADALARRGTMERQLEAQTSLRDSA 412 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + +LS +R G S L LD +R+ E L + + V+LY A+G G Sbjct: 413 RVAYTLSEARFRAGVDSFLTTLDSQRSLYTAEQSLVATRLTREANMVELYRAMGGG 468 >gi|134295683|ref|YP_001119418.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134138840|gb|ABO54583.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 488 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/463 (23%), Positives = 212/463 (45%), Gaps = 33/463 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINID------------TLKWWESFNDTSLNKL 64 GC++ P Y +P P+ P ++ + W F D +L Sbjct: 24 GCSLAPHYERPAAPV-PASYAAPDGGQGGQGGEPAASASADAALLDDWRAYFTDPTLQAW 82 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQL 120 + AL N + A R++ A+ RAD PS A++++ ++ P ++ ++ L Sbjct: 83 IDAALANNRDLRIAAGRLDEARALYGVQRADQLPSLDANLAYDRTRQYDPVVRQSAVSGL 142 Query: 121 D------SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 S +++DLFG+ R + +++LA+ +AYAQ + ++ VI+++ +Y+ R +E Sbjct: 143 YRAGVGISAYELDLFGRVRSLSDAALADYFATAYAQRTV-RIGVIAEVAGAYVAQRSLQE 201 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++++A + LD ++ L+ ++ G + + L E + S + L++ V Sbjct: 202 QLALAQRTLDARERIAALTRRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQAVRA 261 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G +F P+ G P+ L+ RPD+R E +L + A+I Sbjct: 262 LQLLAG----DFAREAPADGATLDALTIAPVAPGAPSALLERRPDVRQAESRLQAANAQI 317 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P ++L GS++ + F + WSF P++ LPIF G+ ++N+ A++ Sbjct: 318 GAARAAFFPRIALTTDYGSVSDAFSSLFAAGTSVWSFAPRITLPIFAGGRNRANLDVADA 377 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++TV A +EV +A + + + Q + L+ Y G Sbjct: 378 RKYIAVAEYEKTVQTAFREVADAFAARGWIDRQLAAQQDVYAADGARLKLAERRYAAGVA 437 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L++LD +R+T + L K + + LY A+G G+ P Sbjct: 438 TYLELLDAQRSTYESGQALIRLKELRLANAIALYRALGGGWTP 480 >gi|313498480|gb|ADR59846.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida BIRD-1] Length = 496 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 44/474 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + LL+ CT+ P+Y +P + QF + I WWE + D LN L Sbjct: 27 GLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNAL 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q+ + A+ + S RA LFPS S S N TG Sbjct: 87 VEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSK----NRSAQGTGSSSSSL 142 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ ++++A + +L+ S+L+ +Y Sbjct: 143 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNY 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y++++ ++ ++ G ++ + ++KS ++D+ L Sbjct: 203 LQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIW 262 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ LLG +F K P L IP+++ P+ L+ RPDI E+ Sbjct: 263 QRAQFENAIAVLLGKTPADFALADSKAI----PALPQIPVSL--PSQLLERRPDIAAAER 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG++++ +P LSL+ S + N N +WS GP+L L +FD GK Sbjct: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 + + R + + +++TVL+ KEVEN L + D+ +V Q A++ ++S+ Sbjct: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFKEVENLLVQLKVYGDEAVVR--QEALDAARESLR 434 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 435 LTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLVAALGGGWD 487 >gi|54295351|ref|YP_127766.1| hypothetical protein lpl2436 [Legionella pneumophila str. Lens] gi|53755183|emb|CAH16676.1| hypothetical protein lpl2436 [Legionella pneumophila str. Lens] Length = 520 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 111/470 (23%), Positives = 215/470 (45%), Gaps = 25/470 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ + L ++L+ C VGP + +P + + WW+ FND +L Sbjct: 4 MLKILVLLSCLILSSCLVGPNFKEPKKDAANYWLTSSPAIKQSAFQNANWWKVFNDPTLT 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FI 109 L+ NL++ A R+ A+ + +L+P A + Sbjct: 64 ALINNGYHNNLSLQIAGVRVLQARAQLAQSVGELYPQQQAMVGDYNYNRIGGNQLQGLLP 123 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T S G + W++D +G+ RR I+S+ A ++ A D A + + S + ++I R Sbjct: 124 PDFLTASLG-FSASWELDFWGKYRRAIQSNDALFLASLAAYDSALVTLTSDIASTFIKIR 182 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E I + + + +++++ ++ G TS L + + E+ ++ +P + Sbjct: 183 TSEELIKVTKANIQVQAMSLKIAKNRYYGGQTSLLDVEQAATELAETQAKLPQYVSDLQH 242 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG + ++K N P + +GIP ++I RPD+ + Sbjct: 243 QKDILAVLLGTTPDKVDGLLKK--NKGIPKASAVVEVGIPKEVIARRPDVYQARMEAIAQ 300 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKI 340 A IG K++LYPSLSL G+ +N F N + GP L + + G+I Sbjct: 301 SAAIGAVKANLYPSLSLVGTFVFASNNIGNSTISDIFNWSNRNIVAGPSLAWSLLNYGQI 360 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R +++ Q+ + + VL +EV++ +T E +K V+ L+ A +S L+ Sbjct: 361 TNAVRAQDAAFQQALLNYLNLVLKVQQEVQDNITRYVEGQKTVSSLKSANASAIESTRLA 420 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y++G + +L+ E+ +V+ L A +LA S V LY ++G G+ Sbjct: 421 LVRYKEGEANYTTVLNAEQQQLRVQTSLVNATGELALSLVGLYRSLGGGW 470 >gi|300698050|ref|YP_003748711.1| multidrug efflux MFS outer membrane protein [Ralstonia solanacearum CFBP2957] gi|299074774|emb|CBJ54337.1| putative multidrug efflux MFS outer membrane protein [Ralstonia solanacearum CFBP2957] Length = 495 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 116/459 (25%), Positives = 224/459 (48%), Gaps = 27/459 (5%) Query: 17 GCTVGPEYTKPHMP----LLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQ 70 GC P+ +P + L ++ ++ + + + +WW F+D +L L A + Sbjct: 26 GCVTAPDTREPALASPKAALRSRAAVVAGEPALTAAAVPSQWWALFDDATLMALEAEATE 85 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-------SYASISHRF-IPNLKTNSTGQ--- 119 NL + A RI ++ ++ A P S ++IS + L + G Sbjct: 86 SNLDLQSAATRIEESRAHLGLADAARQPQLAADAGYSRSAISRNSPLARLGAPTRGSDSW 145 Query: 120 ---LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L++ W++DL+G+ RH+ ES+ ANL+++ + ++++ +++ +Y+ R + + S Sbjct: 146 LLGLEAGWELDLWGRLRHLSESAEANLEASGYGKEAVRVSIAAEVATTYLQLRGVQAQES 205 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + + ++ + G ++ A++ I++ L ++ ++ Sbjct: 206 VAEQNRQLAEGLVRMAESRERNGVATRFDAAAARADVAGIDARRSQLHHKRETLMNALAL 265 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P E + + P + + +GIP++L R RPDI + +L +VA IG A Sbjct: 266 LLGKPPRELDGRL---AAAGLPAMPKRLPVGIPSELARQRPDILQADARLRAAVADIGAA 322 Query: 296 KSDLYPSLSLNGSIAL-THDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++D YP + L+ S + D S G + + FGP L+LPIF+ G++KSN+ + + + Sbjct: 323 EADFYPRIRLSASAGVQAFDFSDLGSWASRRYGFGPTLHLPIFEGGRLKSNLALSTARHR 382 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 I +Q+TVL A EV++AL + + K +LQ A+E ++ ++ ++ Y+QG Sbjct: 383 LAAIAYQQTVLRAWHEVDDALGAYASELKRHAQLQLALEQNQTALDVAQRAYQQGTVDFT 442 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L R+ +L A S V LY A+G G++ Sbjct: 443 SVLVARRSLLASHAELIDCSTASALSVVALYRALGGGWS 481 >gi|299068853|emb|CBJ40094.1| putative multidrug efflux MFS outer membrane protein [Ralstonia solanacearum CMR15] Length = 444 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 213/421 (50%), Gaps = 25/421 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERI----------NAAKENILSVRADLFPSS 100 +WW+ F D +L L A + NL + A RI +AA++ L+ AD + Sbjct: 15 QWWDLFGDATLIALEAEATESNLDLQSAAARIEESRARLGLADAARQPQLA--ADTGYTR 72 Query: 101 YASISHRFIPNLKTNSTGQ------LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAK 153 A H + +L + L++ W++DL+G+ RH ES+ ANL+++ + + Sbjct: 73 SAISKHSPLASLGAPTRASDTWLVSLEAGWELDLWGRLRHQSESAEANLEASGYGEEAVR 132 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +++ +++ +Y+ R + + S+A Q L + ++ + G ++ A++ Sbjct: 133 VSIAAEVAYTYLQLRGVQAQESVAEQNRQLADGLVRMAESRERHGVATRFDAAAARADVA 192 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 I++ + L ++ ++ LLG P E + + P + + +GIP++L R Sbjct: 193 GIDARLSQLHHKREALMNALALLLGKPPRELDGRL---ATAALPAMPKRLPVGIPSELAR 249 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THDNSFPG--YNTHWSFGPKL 330 RPDI E +L +VA IG AK+D YP +SL GS + D S G + ++FGP L Sbjct: 250 QRPDILQAEARLRAAVADIGAAKADFYPRISLTGSAGVQAFDFSDLGSWASRRYAFGPTL 309 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 YLPIF+ G++KSN+ + + + I +Q+TVL A EV++AL + + + +LQ A+ Sbjct: 310 YLPIFEGGRLKSNLALSAARHRLAAIAYQQTVLRAWHEVDDALGTYASELRRHAQLQLAL 369 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ +++++ Y+QG +L +R+ +L A S V LY A+G G+ Sbjct: 370 DQNQTALAVAQRAYQQGTADFTAVLVAQRSLLASHAELIDCSTASALSVVGLYRALGGGW 429 Query: 451 N 451 + Sbjct: 430 S 430 >gi|110833111|ref|YP_691970.1| ABC transporter outer membrane protein [Alcanivorax borkumensis SK2] gi|110646222|emb|CAL15698.1| ABC export system, outer membrane protein [Alcanivorax borkumensis SK2] Length = 461 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 112/459 (24%), Positives = 227/459 (49%), Gaps = 21/459 (4%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I + ++ + VLL+GC + P + PTQ+ + ++ +WW+ FN L+ Sbjct: 5 INKQLWVMVFVLLSGCAMQSGLQAPEQGM-PTQWLNQQQASEAMVNHPQWWQQFNSAELD 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNS-T 117 +LV+ AL N +L A R+ A + V + LFP+ + S S F T+S Sbjct: 64 QLVEKALAANTDLLVAAARVEQADAQLSQVGSALFPTIGLGAGGSRSGVFGEGGSTDSYN 123 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + +++DL+GQ R+ + + A+L ++ D +L VI+ ++ Y+ + ++ +++ Sbjct: 124 ASLSASYELDLWGQLRNSRDVARASLLASQFSRDTVQLTVIASVVNMYLQVLYLQDNLAL 183 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + L L ++ +++ K GA S L + + + ++E+ +P+L R + + ++ L Sbjct: 184 SEENLALAQQVLDVVQAKVENGAVSPQDLAQQKTVVANVEAQLPSLRHQLRQSRYALAVL 243 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G FL +L +P I G+P ++ RPD+ + L + + A Sbjct: 244 VGEMPQAFLV-----GGGALSSLQLPEIQAGLPDQVLAQRPDVAQAQASLMAADYSVAAA 298 Query: 296 KSDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 ++D +PS+SL NG A + +S + +S G L +FD G + I +++++ +E Sbjct: 299 RADYWPSISLTGNGGYASSALSSLFNGDAVYSLGVSLAQTLFDGGARDARIEQSKAAWEE 358 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 Q ++ T+L A++EVE +L+++ + + A +++ ++ + YR+G L D Sbjct: 359 QVASYTGTLLVALQEVEQSLSNVQGLAEQQQYREEAYRQAEEAYRVAQVRYREGETELTD 418 Query: 414 ILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +L + + + +DL + Q S V LY +G G Sbjct: 419 VLSAQSSFNSARQNSLDLIYNQYQ---SRVTLYRVLGEG 454 >gi|116051520|ref|YP_789644.1| putative outer membrane efflux protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115586741|gb|ABJ12756.1| putative outer membrane efflux protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 491 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 221/461 (47%), Gaps = 29/461 (6%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LL GC VGP+Y P + ++ + ++ ++WW F++ +L L++ AL Sbjct: 12 LILLGGCAAVGPDYAPPSASAPASFGAMPAGIDGSGVE-IEWWRGFDEPALESLIQRALA 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST---------GQ 119 NL I A R++ AK + R + P + + R ++T + G Sbjct: 71 ANLDIALAGARLDEAKALLRENREEFLPRGGPAFDYQARRRGEVETPAGQQRDIETYRGA 130 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + +++ H Sbjct: 131 LDASWEIDLFGRVRRSVEAAEAQAGSREALLRNVQASVAATVAMTWFQLLGIEAELAVVH 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 I + ++E+ + G+ + ++ EA + ++E+ +P LE+ + ++ LL Sbjct: 191 DIAGNQRDSLEMVERLVSAGSAHEFDRLRAEALLHNVEAAVPDLERRRAATRNALAVLLA 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 F + + S L + + +G PA L+ R DI E+ LA + A+IG+ + Sbjct: 251 EAPQAFSPPVARASGE---RLTLRTLGVGDPAGLLARRADIAAAERNLAAATARIGVETA 307 Query: 298 DLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 LYP + + GSI L D S +N P + + D+G++++ I +E+ A Sbjct: 308 GLYPQVEVRGSIGLVAGNLDALDESGTSFNV---LNPVIRWALLDRGRVRARIAASEARA 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE I + TVL A++E ++A ++ +L A ++++ L+ + QG Sbjct: 365 QEALILYDRTVLRALQETDDAFNGYGAAADRLRLRLLEAT-ANREAARLARERFVQGDGE 423 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L+ ER+ LSIA+ + + V +Y A+G G+ Sbjct: 424 YLDVLEAERSDYLSRRALSIARTEQRLAVVGIYKALGGGWE 464 >gi|319795278|ref|YP_004156918.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315597741|gb|ADU38807.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 492 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 124/473 (26%), Positives = 220/473 (46%), Gaps = 30/473 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESFNDTSL 61 A +L +LLAGC VGP+Y +P M + G K LI+ + WWE++ DT+L Sbjct: 15 APIALVALLLAGCAVGPDYVRPQMDVPVAYKETGPWKTAKPQLIDA-SHPWWEAYGDTTL 73 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKT 114 + LV A N I A + A+ + A FP+ + A + + T Sbjct: 74 SALVVQANAANQNIRVAEAQYREAQAIAAAAHAGFFPTVGLDAGANRAQTNSTGVTKRAT 133 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 T L + W+ DL+G RR +E+ AN +++ + A+L++ + L Y+ R + Sbjct: 134 TDTLGLAASWEPDLWGAVRRSVEAGNANTEASADDLAGARLSIQTTLAQDYLQIRVIDLQ 193 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + Y K +EL+ ++ G + + E+++K+ E+ LE R H + Sbjct: 194 RGLYASTTAAYAKALELTQHQYAAGTVLRSDVALAESQLKTAEAQAVDLEAQRRQLEHAV 253 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNL--------YIPIN-IGIPADLIRNRPDIRYQEK 283 + L G PA+ L + + +L +P+ G+P++L+ RPDI E+ Sbjct: 254 AVLTGQAPASFSLAPLASSAETTAASLSSTAALRVQLPVTPAGLPSELLERRPDIAGAER 313 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKI 340 ++ + A IG+AK+ YP + L+ S + N +NT WS G L +FD G Sbjct: 314 RVQAANANIGVAKAAYYPQIVLSASGGFSAGNLASLFNTPSRVWSLGAALAQTVFDGGLR 373 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSL 399 K++ +A ++ +++TVL ++VE+ L + D++ + Q AV+ + + L Sbjct: 374 KAHTEQAVAAYDASVAQYKQTVLGGFQQVEDNLAMLRVLDRESALQAQ-AVQASQLAERL 432 Query: 400 SMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ YR G + L ++ ++ + + RQLA S V L A G G+ Sbjct: 433 ALSQYRAGTATYLSVVTAQQFSLTNQRTAAQVLGRQLAAS-VSLIAATGGGWT 484 >gi|313669429|ref|YP_004049856.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfuricurvum kujiense DSM 16994] gi|313156626|gb|ADR35303.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfuricurvum kujiense DSM 16994] Length = 463 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 114/451 (25%), Positives = 214/451 (47%), Gaps = 20/451 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 + GC++ P + P LP + G++ I T +WW+ + D L+ L+ AL+ + Sbjct: 15 IGGCSLAPNL-QIQTPELPA--AKGDTNATERIVTAEWWKRYQDPFLDALIDEALRNSDD 71 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRF----------IPNLKTNSTGQLDS-D 123 + + +N AK + A +P+ AS S + + N+ G + Sbjct: 72 LKLSISNVNTAKALLGLSEAQRYPTLNASASATRQKTSEESLSPMGGMIYNTYGLSATLG 131 Query: 124 WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++ID +G+ ++ E ++L+ + A+ D ++ ++S + +Y + K +I I Q ++ Sbjct: 132 YEIDFWGKLKNQENAALSEFTATQAERDTVRITLVSSVAEAYFNLVAIKRQIEITEQSVE 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K+ E + G ++ + + + + L++S +N + ++ L+G Sbjct: 192 AFKEGYEYRLRQHRFGEIDPMTAEQAHTLYANAKLSLEGLKESKSLNENALALLVGRTPK 251 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 E L IP GIP+DL++ RPDIR E+ L + A IG+AK+ +PS Sbjct: 252 EIGEMGFTTVTELPKPLSIPA--GIPSDLLQRRPDIRSAEEMLRAANANIGVAKAAYFPS 309 Query: 303 LSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL+G+I L + W GP L +P+ D G+IK+ + ES + I + Sbjct: 310 ISLSGNIGLESSELNRLMQNSAGVWGIGPSLNVPLLDFGRIKNQVESTESKKETAQIQYA 369 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++V NA KEV ++L I +T + + + K +SLS + Y G L++LD +R Sbjct: 370 KSVKNAFKEVYDSLKKIESSNAKITAQEEGKDAYVKLLSLSQMRYDAGYVDYLNVLDAKR 429 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +V+L + Q + + LY A+G G+ Sbjct: 430 GELDAQVNLVGLQVQQLANQITLYKALGGGW 460 >gi|307611376|emb|CBX01040.1| hypothetical protein LPW_27411 [Legionella pneumophila 130b] Length = 517 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 111/470 (23%), Positives = 215/470 (45%), Gaps = 25/470 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L+ + L ++L+ C VGP + +P + + WW+ FND +L Sbjct: 1 MLKILVLLSCLILSSCLVGPNFKEPKKDAANYWLTSSPAIKQSAFQNANWWKVFNDPTLT 60 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FI 109 L+ NL++ A R+ A+ + +L+P A + Sbjct: 61 ALINNGYHNNLSLQIAGVRVLQARAQLAQSVGELYPQQQAMVGDYNYNRIGGNQLQGLLP 120 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T S G + W++D +G+ RR I+S+ A ++ A D A + + S + ++I R Sbjct: 121 PDFLTASLG-FSASWELDFWGKYRRAIQSNDALFLASLAAYDSALVTLTSDIASTFIKIR 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E I + + + +++++ ++ G TS L + + E+ ++ +P + Sbjct: 180 TSEELIKVTKANIQVQAMSLKIAKDRYYGGQTSLLDVEQAATELAETQAKLPQYVSDLQH 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG + ++K N P + +GIP ++I RPD+ + Sbjct: 240 QKDILAVLLGTTPDKVDGLLKK--NKGIPKASAVVEVGIPKEVIARRPDVYQARMEAIAQ 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS--------FPGYNTHWSFGPKLYLPIFDKGKI 340 A IG K++LYPSLSL G+ +N F N + GP L + + G+I Sbjct: 298 SAAIGAVKANLYPSLSLVGTFVFASNNIGNSTISDIFNWSNRNIVAGPSLAWSLLNYGQI 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R +++ Q+ + + VL +EV++ +T E +K V+ L+ A +S L+ Sbjct: 358 TNAVRAQDAAFQQALLNYLNLVLKVQQEVQDNITRYVEGQKTVSSLKSANASAIESTRLA 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y++G + +L+ E+ +V+ L A +LA S V LY ++G G+ Sbjct: 418 LVRYKEGEANYTTVLNAEQQQLRVQTSLVNATGELALSLVGLYRSLGGGW 467 >gi|270293901|ref|ZP_06200103.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275368|gb|EFA21228.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 458 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 117/460 (25%), Positives = 231/460 (50%), Gaps = 27/460 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I L + L C VG Y +P M L P S+ ++ ++I +W + D++L L+ Sbjct: 9 ILLLSMFALTSCKVGKSYVRPEMAL-PD--SLAQQQDSMSIADEQWQAVYTDSTLRALID 65 Query: 67 IALQQNLTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS-- 122 AL+ N +L A R+ A + +SV A+L P + + R + +S ++ Sbjct: 66 RALEYNKDMLIAASRVKEMAAQKRISV-ANLLPQLTGKVEAEREVEIYGGHSRDVGNTYE 124 Query: 123 -----DWKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G R + + L S AQ + ++ +++++ +Y + + Sbjct: 125 AKALLSWELDLWGNLRWKKVAAVAEYLQSVEAQRAL-RMTIVAEVAQAYYELVALDTELE 183 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I Q ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++IS Sbjct: 184 IVRQTQKAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERRISLKENDISF 243 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G EF +++ NF L +P + +G+P+DL+ RPD+R E++L A++ Sbjct: 244 LVG----EFPTRIKRV--NFLQELDVPESLPVGLPSDLLERRPDVRAAEQQLKAEHARVK 297 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQ 352 +A ++++P L+L G L D + +S + P+F GK ++ + ++S + Sbjct: 298 VAYTNMFPRLALTGQFGLESDVLSNFLESPYSLLNGAVLAPLFGWGKNRAALNAQKASFE 357 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSL 411 + ++++TVLNA KE +NA+ N+ K+ V +L+ +E K + L+ + Y G + Sbjct: 358 AEVHSYEKTVLNAFKEAKNAIVDFNKIKE-VYQLRAKLERSAKGYVDLAQLQYINGVINY 416 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD +R ++ +S A R + V++Y A+G G+ Sbjct: 417 MDVLDAQRGYFDAQIGVSNAIRDELIAMVNVYKALGGGWQ 456 >gi|224823968|ref|ZP_03697076.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224603387|gb|EEG09562.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 476 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 227/460 (49%), Gaps = 26/460 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTL--KWWESFNDTSLNKLVKI 67 L A TVGP+Y P L+ + + IG + +++D + WW + D +L+KLV Sbjct: 16 LTACTTVGPDYRVPDNALVRSPSANGAFIGGNGAGVSLDPVPAGWWRLYRDPALDKLVSE 75 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------IPNLKT 114 AL+ N +I A+ + A + V A+ P + +++ + +P L Sbjct: 76 ALEANTSIRIASANLRRAMAVVTEVDAERGPHAGVTLAAKRAREAGEAFLVEEKLPVLNE 135 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G + ++IDLFG+ R ES+ A+ +++ A +D+ +++V ++ + SY+ Sbjct: 136 GDAG-IQIAYQIDLFGKLARAEESAHASAEASEAALDLVRVSVAAETVRSYVQMCSAGHE 194 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A +LDL ++++++ G +++ ++ ++ + +P + + + Sbjct: 195 LAVAQHVLDLQNRSVDVARRLADAGRGRITDVLRARSQADTLRATLPRFQAEKDAARYRL 254 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + ++G + + +P + I +G A L++ RPD+R E++LA + A+IG Sbjct: 255 AVMVGKTPQQLQDA--RIDCQTEPRIEQRIPVGDGAALLKRRPDVREAERQLAAATARIG 312 Query: 294 IAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +A + LYPS+ + S + ++ G + GP + I D G ++ ++ A++ A Sbjct: 313 VATAALYPSIIIGASAGYSGILEHLGEGRTERFGLGPLISWTIPDSGA-RARVKIAKTDA 371 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + VLNA++E E AL+ + + + LQ A + +++ + Y+ GR Sbjct: 372 EAALARFDGVVLNALRETETALSFYSRNLQRQADLQTARDEAREAAEQNRRLYQAGRVPY 431 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD ER A E L+ A+ QLA V+L++A+G G+ Sbjct: 432 LSSLDAERTLANTEASLASAESQLAVDQVNLFLALGGGWE 471 >gi|83747152|ref|ZP_00944195.1| Drug efflux lipoprotein (FUSA/NODT family) [Ralstonia solanacearum UW551] gi|207741903|ref|YP_002258295.1| drug efflux lipoprotein [Ralstonia solanacearum IPO1609] gi|83726127|gb|EAP73262.1| Drug efflux lipoprotein (FUSA/NODT family) [Ralstonia solanacearum UW551] gi|206593289|emb|CAQ60216.1| drug efflux lipoprotein [Ralstonia solanacearum IPO1609] Length = 514 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 37/466 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y +P P+ P +++ +N L W E F D L Sbjct: 22 VLSGCSLAPRYERPDAPVAGDYPQAPAGYAVPADTAKPGENAPRATDLGWREFFPDPRLQ 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTGQLD 121 KL+ +AL+ N + A I AA+ ADL P+ AS ++ R + + TGQ D Sbjct: 82 KLIGLALENNRDLRVAVLNIEAARAQYRLQIADLLPAVNASATYTRSLTPQSISQTGQ-D 140 Query: 122 ------------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S ++++LF S+ A+ + ++++IS++ +Y++ R Sbjct: 141 INTKQYQLGVGISSYQVNLFSVGDVTSSARASYLATEEGQRATQISLISQVAKAYLNERA 200 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + E++ +A Q L + +L+ +F GA+S L L + E ++S + L + + Sbjct: 201 YAEQLELAQQTLKGREDYYKLAKQRFDVGASSALDLRQNETLVESARVSVAQLTRQYAQA 260 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+ P L S+ + I G+P+DL+ RPDIR E+KL + Sbjct: 261 TNALVLLVSAPLPADLPAPTTVSSE---KIVADIPPGLPSDLLIQRPDIRQAEQKLIAAN 317 Query: 290 AKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A++ +PS+ L ++ HD F WSF P LPIF+ G N+ Sbjct: 318 ANIGVARAAFFPSIGLTSNVGTASTALHD-LFKSGTGLWSFVPNATLPIFNWGTNLFNLD 376 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +++ + +++T+ A +EV +AL + ++ V + + + ++LS YR Sbjct: 377 LTKANQKIALANYEKTIQTAFQEVSDALVARGTLEEQVAAQKRFRDATAERLTLSDQRYR 436 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + +DLY A+G G Sbjct: 437 NGVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAIDLYTALGGG 480 >gi|256840694|ref|ZP_05546202.1| outer membrane protein oprM [Parabacteroides sp. D13] gi|256737966|gb|EEU51292.1| outer membrane protein oprM [Parabacteroides sp. D13] Length = 459 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 227/465 (48%), Gaps = 26/465 (5%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N A F + ++ + C +G Y +P + L + ++ + +++ + W + D +L Sbjct: 5 NFYIAAFVVSMLAFSSCKIGKRYVRPELNLPDRIEAYTDTTDTASVENIPWESLYADEAL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASISHRFIPNLKTNSTG 118 L++ AL N + A ++ KE I + R A + P A+I + + N G Sbjct: 65 KDLIRKALDNNKDMKIAAAKV---KEMIAAKRISFASMLPEVGANI---YAQKERLNYGG 118 Query: 119 -----------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +L W++DL+G R E+++A+ +L +I+++ +Y Sbjct: 119 DNPKPDPEFGAKLTLSWELDLWGNLRWANEAAIASYMETVEGQRALRLTIIAEVAANYYQ 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +SI Q LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ Sbjct: 179 LCALDQELSIVQQTLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQI 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ ++STLLG E+ + + + +L + IG+P+ L+ RPD+R E KL Sbjct: 239 KIKESDLSTLLG----EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLR 294 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIR 345 + A++G+A++DL+P + L + D + F L PIF GK K+ ++ Sbjct: 295 AANAQVGVAQTDLFPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVK 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ +++ +++++VL A KEV NA+ ++ + K+I + K + L+ + Y Sbjct: 355 AAKARYEQEVYSYEKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYI 414 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 415 NGVISYMDVLDAQRGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 459 >gi|146311602|ref|YP_001176676.1| RND efflux system outer membrane lipoprotein [Enterobacter sp. 638] gi|145318478|gb|ABP60625.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter sp. 638] Length = 459 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 225/466 (48%), Gaps = 29/466 (6%) Query: 4 LRAIFSLFIV-LLAGCT---VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 R + L + LLAGC + P KP + + P Q+ + + WW +F+D Sbjct: 3 FRPVAGLIVAALLAGCQSADIAP--AKPTLQI-PAQWR--ETSGPASPAEQLWWRNFHDN 57 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIP 110 LN+ V ALQ N +L A ER+N + + + LFPS A IS +P Sbjct: 58 HLNRYVSQALQNNSDVLIARERVNEYQARVYAADGSLFPSLDAGISGTRARSQSAATGLP 117 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + G L + + +D++G R ++ A+LD+ A A L V + + YI Sbjct: 118 VYGSLYKGSLTASYDVDIWGVNRSTSRAAQASLDAQKAAAAAADLTVAASVASGYITLLS 177 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + L ++ +L+ +F G +S+L L++ ++E++S + IP ++ Sbjct: 178 LDEQLRVTQSTLKSREEAWKLAKRQFETGYSSRLELMQSDSELRSTRAQIPQVQHQIAQQ 237 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LLG +S F+ + I +P+ L+ RPDI E++L + Sbjct: 238 ENALSILLGNNPGAV-----ARSERFETLTPLQIPSQLPSSLLNRRPDIVQAERQLIATD 292 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIR 345 A + ++++L PS++L S ++ D + G + WS G + P+ ++ + + + Sbjct: 293 ASLAASRANLLPSINLTASGSI-QDRTLSGLLDNPLQLWSVGGSILAPLLNRQALNAQVD 351 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++S + ++++TV NA EV N+L +I ++ +T+L + ++++ ++ Y Sbjct: 352 ISQSQRNQALYSYEKTVRNAFAEVNNSLDAITRYQEQLTELLAQQAVSQETLRIAQNRYN 411 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S LD+LD +R V+ ++ K L + +DLY A+G G++ Sbjct: 412 NGYSSYLDVLDAQRTLYTVQTNVVQVKNNLLLAQIDLYKAVGGGWS 457 >gi|323170690|gb|EFZ56340.1| cation efflux system protein cusC [Escherichia coli LT-68] Length = 460 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|221069588|ref|ZP_03545693.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220714611|gb|EED69979.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 494 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 117/471 (24%), Positives = 218/471 (46%), Gaps = 42/471 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI------DTLKWWESFNDTSLNKLVK 66 LLAGC VGP++ P P QF+ + +W F D L +LV+ Sbjct: 22 ALLAGCAVGPDFRVPEPPPAGAQFARAEPSAVPQQVFPEAGSDAAFWRQFQDGQLTQLVE 81 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--------------SYASISHRFIPNL 112 AL+ N + A R++AA+ + R D FP+ S A P Sbjct: 82 QALRANQELRGALARLDAAQALLGESRLDQFPTLTLSGQALQQRRSESQAPSGTPSGPRS 141 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + + + +++ W++DLFG+ RR+IE+ A+L ++ A + ++ + +++ Y D R ++ Sbjct: 142 QRSYSVGINASWELDLFGRVRRNIEAGSADLRASAADLAALQVAIAAQVAAGYADLRGWQ 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +R+ +A + + L L+ G+ + L + +A+++S S IP L+ + H Sbjct: 202 QRLHLAEANAANQQDTLRLVQLRLAHGSGTDFDLARAQAQLESTRSRIPALQARIAVAQH 261 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G + + + P L I G PA+L+R RPD+ E +L + A+ Sbjct: 262 RLAVLTGQVPEALIAALDVPAAL--PQLPESIAPGTPAELLRRRPDVAAAEARLHAATAR 319 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY-----------NTHWSFGPKLYLPIFDKGKI 340 +G+A ++L+P LSL G + + + + WSF D G++ Sbjct: 320 VGVATAELFPRLSLGGLLGSSALGAGALFEAGSASRSVFLGVDWSF--------LDVGRV 371 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ I +E+ AQ +Q++VL A+++ ENAL + + L A E ++ L+ Sbjct: 372 RARIAASEAGAQIALAQYQQSVLLALEDTENALVGLARTRTEDAHLAQAAEQRARAEQLA 431 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G L ++LD +R + + ++ + ++ V LY A+ G+ Sbjct: 432 QRRYRLGSVGLYEVLDAQRDLYAAQDAAADSRVRGLRAAVALYQALAGGWE 482 >gi|91794431|ref|YP_564082.1| RND efflux system, outer membrane lipoprotein, NodT [Shewanella denitrificans OS217] gi|91716433|gb|ABE56359.1| RND efflux system, outer membrane lipoprotein, NodT [Shewanella denitrificans OS217] Length = 496 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 129/481 (26%), Positives = 228/481 (47%), Gaps = 55/481 (11%) Query: 5 RAIFSLFIVLLAGC-TVGPEY---TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R ++ + L C +VGP+Y TK + ++ +Q+S +L WW++F+D Sbjct: 17 RTAIAILVASLTACASVGPDYQAPTKVNEQVIDSQYSQAE-------HSLDWWQAFDDAE 69 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN++V +AL QN T+LQA+ + A+ D P SH+ + + N + + Sbjct: 70 LNRIVSLALAQNRTLLQASLNVERAQAIFGDTDNDTLPKGSLGGSHQSLKSPSANPSASM 129 Query: 121 -DSD-------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 D+D W +DLFG+ RR E++ AN + A AK+ +IS++ SY Sbjct: 130 QDNDSIIRTNQVGANLSWDVDLFGKLRRASEAAKANSEQARLLWREAKIQLISQVASSYG 189 Query: 166 DARHFKERISIAHQILDLYKKNIELS----HLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + R + R HQ+ + +I S H +F G S+L L +++A+ +E+++ Sbjct: 190 ELRGAELR----HQVAKDNRASIAQSRSIIHSRFEAGFASELELARIDAQRYELEANLLQ 245 Query: 222 LEKSFRMNVHNISTLLGYP----------ATEFLHYMQKQSNNFQ-PNLYIPINI----G 266 LE+ +S LLG A+ K S Q P L P+ + Sbjct: 246 LEQDKARAKATLSALLGQTEVYAANASVSASAAQSIATKGSAVSQIPTLKQPLAMMDTAA 305 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHW 324 P + +++R D+ E+ +A + AKIG+A +DLYP++S++G + S N W Sbjct: 306 EPVNYLQHRADVAAAERAIASTSAKIGVASADLYPNVSVSGFLGFIAPAGVSLSSDNQAW 365 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT--SINEDKKI 382 S P + + D IKS I+ E Q +++TV NA+ ++ +LT S+++ + Sbjct: 366 SVAPNISWQLADLSSIKSRIKVTEIEQQIALAEFEQTVFNALADMRLSLTGYSLSQQQLA 425 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 T+LQ L ++++ Y+ G L +LD ER + + L+ ++Q V++ Sbjct: 426 KTELQWQATL--TALNIEKARYQAGTSEFLALLDAEREQLRSQDKLAQMQQQSFSQLVNV 483 Query: 443 Y 443 Y Sbjct: 484 Y 484 >gi|33597923|ref|NP_885566.1| outer membrane component of multidrug efflux system [Bordetella parapertussis 12822] gi|33574352|emb|CAE38689.1| outer membrane component of multidrug efflux system [Bordetella parapertussis] Length = 487 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 114/451 (25%), Positives = 208/451 (46%), Gaps = 24/451 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTLK--WWESFNDTSLNKLVKIALQQNLT 74 C VGP+Y P P + + + L + D L+ WW D L+ L+ +AL +NL Sbjct: 25 CAVGPQYQAPT----PAPVKLASPEQALFSADRLQREWWRQLQDARLDALIGLALARNLD 80 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH-----RFIP-----NLKTNSTGQLDSDW 124 I QA R+ A+ + D +P+ A+ + + P NL + D+ W Sbjct: 81 IRQAQARLREARAALDEKELDRWPTVTAAGGYTRSLSQINPGPDQRNLAQSYRAGFDATW 140 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDI-AKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +IDLFG+ + + A D A A +L V+++L +Y + R ++R+++A L Sbjct: 141 EIDLFGRLQRRAEAAAARDQAAAADLAQTRLVVVAELARNYFEMRGAEQRLAMARANLAT 200 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + ++ G L AE+ + + LE R+ + I+ L E Sbjct: 201 QQETLRVTAALVETGRGYAGDLASARAELAGTRALLAPLETQRRLAQYRIAVLAAMRPAE 260 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 Q+Q P L + IG A L++ RPD+R E+ LA + A +G ++LYP + Sbjct: 261 LGELRQEQP--LAP-LAAQLPIGDVAMLLQRRPDVRAAERLLAATNADVGAITAELYPRI 317 Query: 304 SLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L G IAL + + ++ P + P G +++ +R ++ +++ Sbjct: 318 DLGGFLGFIALRGGDLGQASSKAFALAPTISWPALHLGSVQAQLRAGQARHDAARARYEQ 377 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 L AI+EVE ALT ++++ + L + +++ L+ YR+G L +LD +R Sbjct: 378 VALQAIEEVEGALTRYGQNQQRLRDLLDSATQSQRAADLAQTRYREGAAPYLTVLDAQRT 437 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++ ++ + S V LY A+G G+N Sbjct: 438 LLRAQDAVAQSESESYTSLVALYKALGGGWN 468 >gi|124514966|gb|EAY56477.1| RND efflux system, outer membrane lipoprotein (NodT) [Leptospirillum rubarum] gi|206603900|gb|EDZ40380.1| RND efflux system, outer membrane lipoprotein (NodT) [Leptospirillum sp. Group II '5-way CG'] Length = 500 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 115/481 (23%), Positives = 229/481 (47%), Gaps = 49/481 (10%) Query: 8 FSLFIVL-LAGCTVGPEYTKPHMPL--------LPTQFSIGNSKNLINIDTLK------- 51 FSL +L LAGC VGP++ P P LP ++ + + + T + Sbjct: 11 FSLATLLILAGCAVGPDFHTPPAPKTNAYTKKPLPENVTVTENGKKV-VQTFRPGSDIPG 69 Query: 52 -WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--- 107 WW F+ +LN L++ AL+ N A + + A EN+ PS AS+ Sbjct: 70 EWWTLFHSRALNGLIEEALKSNPNFKAAEQSLLQAMENVGVGEGSFLPSGTASLGTTQQY 129 Query: 108 ---------FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 F+ NL T +TG + + +D+FG RR +ES A + Q++ A L + Sbjct: 130 FNGAAFGAPFLSNLFTLNTGNVSVSYTLDIFGGIRRQLESLKAQAEYQRYQLEAAYLTLT 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ + I ++ +I+ QI+++ + + + ++ G S+ +++ E + ++ Sbjct: 190 SNIVLTAIQEASYRAQIAATRQIVNVLDRELSIVRHQYALGYASRTAVLTQETILYQEKA 249 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIR 273 +P L+K H ++ LG +P +K ++F+ +L +P + + +P++L+ Sbjct: 250 LLPALKKQLAFEKHQMAVYLGRFP-------NEKIGDDFRLDDLSLPKQLPLSLPSELVE 302 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPK 329 +RPDIR E++L + A+IG+A +++ P +SL G+ S GY + W++GP Sbjct: 303 HRPDIRAAEEQLHSASAQIGVATANMLPQVSLTGNYG---SESIEGYFSPGSQFWAWGPS 359 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + P+F + + + A ++ ++ ++ +L A + V + L SI D I+ A Sbjct: 360 VSNPLFQEFTLYHQKKAAIAAFRKAKDQYKNAILQAFQNVADTLRSIQSDADILNVQTSA 419 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++S+ ++ + G D+ + +R + ++L A+ V L+ A+G G Sbjct: 420 EKAAQESLHIAEHQFTIGAIGYPDLYNAQRTYQQALINLVQARANQYSDTVALFQALGGG 479 Query: 450 Y 450 + Sbjct: 480 W 480 >gi|332850417|ref|ZP_08432737.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6013150] gi|332871855|ref|ZP_08440278.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6013113] gi|332730688|gb|EGJ61999.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6013150] gi|332731184|gb|EGJ62484.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6013113] Length = 469 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 125/477 (26%), Positives = 223/477 (46%), Gaps = 50/477 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLN 62 +LLAGC++ PEY +P ++P +F + K N + +WW +ND LN Sbjct: 4 LLLAGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLN 62 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 +L + A+ N + I A++ + +A+ PS I F P + S L Sbjct: 63 ELEQQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGL 118 Query: 123 D----------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D W+ +DLFG+ + ++ A+L A A L + + + Sbjct: 119 DDNAHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQG 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R +I ++ + L + +L L+F G S+L + + + E+ + ++ + Sbjct: 179 YFLIRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIA 238 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ Sbjct: 239 RNRASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAER 293 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPI 334 +A A+IGIA++ +P LSL G AL +++S WS GP L LP+ Sbjct: 294 AMAADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPL 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + Sbjct: 352 FDGGQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSR 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 412 HANQLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 468 >gi|148547410|ref|YP_001267512.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148511468|gb|ABQ78328.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 496 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 44/474 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + LL+ CT+ P+Y +P + QF + I WWE + D LN L Sbjct: 27 GLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNAL 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q+ + A+ + S RA LFPS S S N TG Sbjct: 87 VEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSASK----NRSAQGTGSSSSSL 142 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ ++++A + +L+ S+L+ +Y Sbjct: 143 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNY 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y++++ ++ ++ G ++ + ++KS ++D+ L Sbjct: 203 LQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIW 262 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ LLG +F K P L IP+++ P+ L+ RPDI E+ Sbjct: 263 QRAQFENAIAVLLGKTPADFALADSKAI----PALPQIPVSL--PSQLLERRPDIAAAER 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG++++ +P LSL+ S + N N +WS GP+L L +FD GK Sbjct: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 + + R + + +++TVL+ KEVEN L + D+ +V Q A++ ++S+ Sbjct: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFKEVENLLVQLKVYGDEAVVR--QEALDAARESLR 434 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 435 LTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLVAALGGGWD 487 >gi|317474026|ref|ZP_07933305.1| NodT family efflux transporter [Bacteroides eggerthii 1_2_48FAA] gi|316909868|gb|EFV31543.1| NodT family efflux transporter [Bacteroides eggerthii 1_2_48FAA] Length = 471 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 118/457 (25%), Positives = 232/457 (50%), Gaps = 27/457 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L VL A C VG Y +P M +LP S+ ++ +I +W + D +L L+ AL Sbjct: 24 LIPVLFASCKVGKSYVRPEM-VLPD--SLAQQQDSASIADEQWQAVYTDNTLRSLIDRAL 80 Query: 70 QQNLTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS----- 122 + N +L A R+ A + +SV A+L P + + R + N +S ++ Sbjct: 81 EYNKDMLIAAARVKEMAAQKRISV-ANLLPQLNGRVEAEREVENHGGHSRDVGNTYEAKA 139 Query: 123 --DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DL+G R +++ L S AQ + ++ ++S++ +Y + + I Sbjct: 140 LLSWELDLWGNLRWKKAAAVAEYLQSVEAQRAL-RMTIVSEVAQAYYELVALDTELEIVR 198 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G Sbjct: 199 QTQKAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERKISIKENDIAFLAG 258 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 EF +++ + F L +P + +G+P+ L+ RPDIR E++L A++ +A Sbjct: 259 ----EFPTRIER--SRFLQELDVPESLPVGLPSGLLERRPDIRAAEQQLIAEHARVKVAY 312 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 ++++P LSL G L D + +S + P+F+ GK ++ ++ ++S + + Sbjct: 313 TNMFPRLSLTGQFGLESDVLSNFLQSPYSLLNGAVLTPLFNWGKNRAALKAQKASFEAEV 372 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDI 414 ++++ VLNA KE +NA+ N+ K+ V +L+ +E K+ + L+ + Y G + +D+ Sbjct: 373 HSYEKAVLNAFKEAKNAIVDFNKIKE-VYQLRLKLERSAKTYVELAQLQYINGVINYMDV 431 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R ++ +S A R + V++Y A+G G+ Sbjct: 432 LDAQRGYFDAQIGVSNAIRDELIAVVNVYKALGGGWQ 468 >gi|218549854|ref|YP_002383645.1| copper/silver efflux system outer membrane protein CusC [Escherichia fergusonii ATCC 35469] gi|218357395|emb|CAQ90034.1| copper/silver efflux system, outer membrane component [Escherichia fergusonii ATCC 35469] Length = 462 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 125/460 (27%), Positives = 223/460 (48%), Gaps = 30/460 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 F V LA GC++ P+Y +P MP+ P QFS+ + + +D + W F D + L+ Sbjct: 11 FCVALALTGCSLAPDYQRPAMPV-PQQFSLSQNGQVNAVDNYQNAGWRTFFVDNQVKTLI 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TG 118 AL N + AT ++ A+ AD +P S + NLK +S TG Sbjct: 70 SEALVNNRDLRMATLKVQEARTQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG 129 Query: 119 QLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ + D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ I Sbjct: 130 -LNASFDFDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQI 187 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L Y+++ + G+++ L+L + I+S SDI + + + L Sbjct: 188 AEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLL 247 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + Q Q+ N + + G+ + ++ RPDI E L + A IG A+ Sbjct: 248 LG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAAR 303 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ Sbjct: 304 AAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQ 363 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L+ Sbjct: 364 SVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLE 423 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ A RQ+ + V LY A+G G+ Sbjct: 424 VLDAERSLFATRQTLLDLNYA-RQVNE--VSLYTALGGGW 460 >gi|301309768|ref|ZP_07215707.1| outer membrane efflux protein [Bacteroides sp. 20_3] gi|300831342|gb|EFK61973.1| outer membrane efflux protein [Bacteroides sp. 20_3] Length = 459 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 116/462 (25%), Positives = 225/462 (48%), Gaps = 20/462 (4%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N A F + ++ + C +G Y +P + L + ++ + +++ + W + D +L Sbjct: 5 NFYIAAFVVSMLAFSSCKIGKRYARPELNLPDRIEAYTDTTDTASVENIPWESLYADETL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASI---SHRF-----IP 110 L+K AL N + A ++ KE I + R A++ P A+I R P Sbjct: 65 KDLIKKALDNNKDMKIAAAKV---KEMIAAKRISFANMLPEVGANIYAQKERLNYGGDDP 121 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +L W++DL+G R E+++A+ +L +I+++ +Y Sbjct: 122 KPDPEFGAKLTLSWELDLWGNLRWANEATIASYMQTVEGQRALRLTIIAEVAANYYQLCA 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +SI Q LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ ++ Sbjct: 182 LDQELSIVQQTLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQIKIK 241 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++S LLG E+ + + + +L + IG+P+ L+ RPD+R E KL + Sbjct: 242 ESDLSMLLG----EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLRAAN 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAE 348 A++G+A++DL+P + L + D + F L PIF GK K+ ++ A+ Sbjct: 298 AQVGVAQTDLFPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVKAAK 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + +++ +++++VL A KEV NA+ ++ + K+I + K + L+ + Y G Sbjct: 358 ARYEQEVYSYEKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYINGV 417 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 418 ISYMDVLDAQRGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 459 >gi|26990294|ref|NP_745719.1| RND efflux transporter [Pseudomonas putida KT2440] gi|24985246|gb|AAN69183.1|AE016552_5 RND efflux transporter, outer membrane protein [Pseudomonas putida KT2440] Length = 496 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 226/474 (47%), Gaps = 44/474 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + LL+ CT+ P+Y +P + QF + I WWE + D LN L Sbjct: 27 GLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNAL 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q+ + A+ + S RA LFPS S S N TG Sbjct: 87 VEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSK----NRSAQGTGSSSSSL 142 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ ++++A + +L+ S+L+ +Y Sbjct: 143 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNY 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y++++ ++ ++ G ++ + ++KS ++D+ L Sbjct: 203 LQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIW 262 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ LLG +F K P L IP+++ P+ L+ RPDI E+ Sbjct: 263 QRAQFENAIAVLLGKAPADFALADSKAI----PALPQIPVSL--PSQLLERRPDIAAAER 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG++++ +P LSL+ S + N N +WS GP+L L +FD GK Sbjct: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 + + R + + +++TVL+ +EVEN L + D+ +V Q A++ ++S+ Sbjct: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVR--QEALDAARESLR 434 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 435 LTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLVAALGGGWD 487 >gi|255010520|ref|ZP_05282646.1| putative puter membrane protein [Bacteroides fragilis 3_1_12] gi|313148326|ref|ZP_07810519.1| outer membrane protein [Bacteroides fragilis 3_1_12] gi|313137093|gb|EFR54453.1| outer membrane protein [Bacteroides fragilis 3_1_12] Length = 458 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 227/451 (50%), Gaps = 25/451 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L C +G Y +P + L P S+ ++ ++ +WW+ + D++L L+ AL+ N Sbjct: 17 LGSCKIGKSYVRPDLNL-PD--SLAQHQDTLSFGDREWWQIYTDSTLRSLIDRALEHNKD 73 Query: 75 ILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPN-----LKTNST--GQLDSDW 124 +L A R+ AA++ I + A+L P +++ R N K + T QL W Sbjct: 74 MLIAAARVKEMAAQKRIST--ANLLPDIKGTVTAERENENHGGDAFKRSDTFEAQLLFSW 131 Query: 125 KIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++DL+G R S S+A L S AQ + ++ +++++ +Y + + I Q L Sbjct: 132 ELDLWGNLRWARSASIAEYLQSVEAQRAL-RMTIVAEVAQAYYELVALDTELDIVRQTLK 190 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G Sbjct: 191 AREEGMRLARIRFEGGLTSETSYRQSQVELARTATLVPDLERKISLKENDIAFLAGEYPN 250 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q NF L +G+P+ L+ RPDIR E+KL + A++G+A ++++P Sbjct: 251 KITRSRLLQEFNFPQEL----PVGLPSGLLERRPDIRQAEQKLIAANARVGVAYTNMFPR 306 Query: 303 LSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 +SL G + + +S L PIF GK ++ ++ +++ + + +++++ Sbjct: 307 ISLTGRVGSESTALSELLKSPYSIMEGALLTPIFGWGKNRAALKAKKAAYEAEVHSYEKS 366 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDILDIERA 420 VL A KE NA+ + N+ K+ V L+ +E KS + L+ + Y G + LD+LD +R Sbjct: 367 VLTAFKETRNAIVNFNKIKE-VYDLRAKLERSAKSYVDLAQLQYINGVTNYLDVLDAQRG 425 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS A R + V +Y A+G G+ Sbjct: 426 YFDAQIGLSNAMRDELIAVVQVYKALGGGWQ 456 >gi|264677906|ref|YP_003277813.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262208419|gb|ACY32517.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 471 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 220/472 (46%), Gaps = 34/472 (7%) Query: 2 NILR-AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N +R A +L +LAGC+ P Y +P P+ P +S +S + ++ +L W + D Sbjct: 5 NTMRTATLTLIAAMLAGCSFAPTYERPAAPI-PGNWSAASSASAASMQSLHWKDFVIDER 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNST 117 L ++ AL N + Q + A+ RAD P A S R +L T Sbjct: 64 LRSRIETALANNRDLRQTLLNVQTARAAYRVQRADQLPGLEAQASGNRQRLPADLSGTGT 123 Query: 118 GQLDSDWK---------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ S+++ +DLFG+ + E++L + ++++++++I + + Sbjct: 124 ARVQSNYQAGAGLMAFELDLFGRVSSLSEAALMEYLATEEAARSVQISLVAEVIQASLAQ 183 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++R ++A + L +K +L + G S+L + + +++ +++ E+ R Sbjct: 184 DSARQRQALALRTLQAREKEWQLMSERRKTGTASRLDEQEAQGQLELARAEVERFERELR 243 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G +Q ++ L I G+P+DL+ RPDIR E +L Sbjct: 244 QAGNALDWLVGD------GRVQPAADLSATPLVQEIGPGLPSDLLVLRPDIRAAEYQLRS 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +P +SL GS + F G WSF P+L LPIFD G+ ++N+ Sbjct: 298 RNASIGAARAAFFPRISLTGSYGSASAELGDLFAGGQRSWSFMPQLSLPIFDGGRNRANL 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ +++ ++ A +EV +AL S+ ++ Q V+ ++ L+ + Y Sbjct: 358 EIAQLRKDMAVASYERSIQTAFREVSDALASVETLRREEFARQRLVQTSANTLKLAELRY 417 Query: 405 RQGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L LD +R A +EV A+RQ+A L+ A+G G+ Sbjct: 418 RAGVDSHLRYLDAQRTDYAQQMALIEVS---AQRQMA--LATLFKALGGGWQ 464 >gi|242309948|ref|ZP_04809103.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523245|gb|EEQ63111.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 466 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/454 (23%), Positives = 216/454 (47%), Gaps = 23/454 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+ GC++ P+Y +P L P F + SK I + WW+ FND LN +V+ AL+ N Sbjct: 13 ILVGGCSLSPKYEQPKTNL-PQDFGVEASKESI---SQTWWKDFNDEYLNNIVEEALKNN 68 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS---------- 122 + A ER++ A+ + R+D +P+ S N + S G D+ Sbjct: 69 YDLAVAMERVSQARSSWSYARSDRYPT--ISAQGEATRNKENPSQGMYDNYNNFSLSGVL 126 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DL+G+ R + S+ A L + A D +L++I+ ++ SY ++ I+ L Sbjct: 127 SFELDLWGKARDTDRSAYATLLANKANRDTVRLSLIANVVESYFGILTLNNQVQISQNTL 186 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-P 240 +++ E +F G S++ + + ++E+ S+ + + +L ++ LLG P Sbjct: 187 KSREESYEYRKKEFEAGKISEIDMQQAKSEMASVRAQLQSLLMERNSAQTSLLILLGRDP 246 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 F + ++ +P G+P+ L+ RPDI + L + IG+A++ + Sbjct: 247 QGIFNVELPTEAQMLPKAPKVPT--GLPSTLLEQRPDIEMATQNLKAANFSIGVARAAYF 304 Query: 301 PSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P++SL G + + F ++ W++G + D G+ +N+ ++S +E + Sbjct: 305 PTISLTGLVGYVSPELNELFQSSSSTWNYGGTFVGNVIDFGRTSANVELSKSQYREMLLN 364 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + TV A EV N L + + + L VE ++++ L+ + Y++G + L++L Sbjct: 365 YGNTVRQAFGEVRNYLYNYGMSDERLKSLDEQVEALRRTLVLAEMRYKEGYTNYLEVLTT 424 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E+ A + + ++LY A G G++ Sbjct: 425 QSNLFAAELTQQSANLENLSAVINLYKAFGGGWD 458 >gi|330981797|gb|EGH79900.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 472 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 115/463 (24%), Positives = 225/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF VL L+GC++ P+Y +P P+ P F+ + + + W + F D +L +L+ Sbjct: 9 LFAVLSLSGCSLIPDYQRPAAPVAAHYPQSFNSAPALSGPLAADMGWGDLFRDPTLQQLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + P T + G + S Sbjct: 69 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGGPVTSG 128 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S AQ A+L++++ + +Y+ R + Sbjct: 129 TYSATLGISSYELDLFGRIRSLSGQASLTYLSSEEAQRS-AQLSLVASVATAYLTWRADQ 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 188 ELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQVAQDLN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N++ L+G + S + G+P+DL++ RPDI E +L + A Sbjct: 248 NLTLLVGTTVAD-----SAPSRPLSSEWLAEVPAGLPSDLLQRRPDILEAEYQLQSANAS 302 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F + W F P++ +PIF+ G +++++ ++ Sbjct: 303 IGAARAAFFPSITLTANAGTSSTELSGLFKAGSGGWVFSPQINIPIFNAGSLRASLDYSK 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ A +EV + L + K+ + V+ ++ SL+ YR G Sbjct: 363 IQKDISVSKYEKSIQTAFQEVSDGLAARQTYKRQLKAQSDLVQASQEYYSLAERRYRIGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R+ + L + + V+LY A+G G+ Sbjct: 423 DSSLTFLDAQRSLFSAQQTLITDRLSQLTAEVNLYKALGGGWT 465 >gi|289674189|ref|ZP_06495079.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 472 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 115/463 (24%), Positives = 225/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF VL L+GC++ P+Y +P P+ P F+ + + + W + F D +L +L+ Sbjct: 9 LFAVLSLSGCSLIPDYQRPAAPVAAHYPQSFNSAPAFSGPLAADMGWRDLFRDPTLQQLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + P T + G + S Sbjct: 69 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGGPVTSG 128 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S AQ A+L++++ + +Y+ R + Sbjct: 129 TYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEAQRS-AQLSLVASVATAYLTWRADQ 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 188 ELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQVAQDLN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N++ L+G + S + G+P+DL++ RPDI E +L + A Sbjct: 248 NLTLLVGTTVAD-----SAPSRPLSSEWLAEVPAGLPSDLLQRRPDILEAEYQLQSAKAS 302 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F + W F P++ +PIF+ G +++++ ++ Sbjct: 303 IGAARAAFFPSITLTANAGTSSTELSGLFKAGSGGWVFSPQINIPIFNAGSLRASLDYSK 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ A +EV + L + K+ + V+ ++ SL+ YR G Sbjct: 363 IQKDISVSKYEKSIQTAFQEVSDGLAARQTYKRQLKAQSDLVQASQEYYSLAERRYRIGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R+ + L + + V+LY A+G G+ Sbjct: 423 DSSLTFLDAQRSLFSAQQTLITDRLSQLTAEVNLYKALGGGWT 465 >gi|153807988|ref|ZP_01960656.1| hypothetical protein BACCAC_02274 [Bacteroides caccae ATCC 43185] gi|149129597|gb|EDM20811.1| hypothetical protein BACCAC_02274 [Bacteroides caccae ATCC 43185] Length = 457 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 123/458 (26%), Positives = 226/458 (49%), Gaps = 31/458 (6%) Query: 10 LFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LF +L C VG Y +P H+P S+ ++ ++ W + + D++L L+ Sbjct: 12 LFAGILTSCKVGKSYVRPDLHLP-----DSLAQHQDSVSFGDQDWKDIYADSTLRSLIDR 66 Query: 68 ALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDS-- 122 AL+ N +L A R+ AA++ I + A L P ++ R + N ++ + D+ Sbjct: 67 ALEHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTAERELENHGGDAFKKADTFE 124 Query: 123 -----DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G R S S+A L S AQ + ++ +++++ +Y + + Sbjct: 125 AQFLVSWELDLWGNLRWARSASIAEYLQSIEAQRAL-RMTIVAEVAQAYYELVALDTELD 183 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ Sbjct: 184 IVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDIAF 243 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G Q NF L +G+P+ L+ RPDIR E+KL + AK+G+A Sbjct: 244 LAGEYPNRIARSRLLQEFNFPETL----PVGLPSTLLERRPDIRQAEQKLIAANAKVGVA 299 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 ++++P L+L G T S + + L PIF GK ++ ++ +++ + Sbjct: 300 YTNMFPRLALTGGFG-TESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKAAFEG 358 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLL 412 + ++++VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G + L Sbjct: 359 EVHNYEKSVLTAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVINYL 417 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D+LD +R ++ LS A R + V LY A+G G+ Sbjct: 418 DVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGW 455 >gi|152981001|ref|YP_001354628.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille] gi|151281078|gb|ABR89488.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille] Length = 481 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 119/459 (25%), Positives = 219/459 (47%), Gaps = 33/459 (7%) Query: 14 LLAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L+ C++ P+Y +P P+ +P++ N + + W F D L L+ A Sbjct: 13 VLSACSMAPKYVRPDAPVAADYGVPSK----ADNNQVRAVDIGWRNFFTDPRLQVLIGNA 68 Query: 69 LQQNLTILQATERINAAKE--NILSVRADLFPS--SYASISHRFIPNLKTNSTGQLDSD- 123 + N + A RI A+ NI S ADL P+ A+ S +P +N+ + S Sbjct: 69 IANNRDLRVAALRIEEARALYNIQS--ADLLPTLNVNATGSRARVPASISNTGSSVVSSN 126 Query: 124 ---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +++D FG+ R + +++LA S A+++++S++ +Y+ R F E+ Sbjct: 127 YQVGLGLAAFELDFFGRVRSLSDAALAAYLSTEEAQRAAQISLVSEVAKAYLSERSFAEQ 186 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +A Q + + +LS +F GA+S L L EA +++ + ++ ++ + Sbjct: 187 QDLARQTYESRVEAYKLSKQRFEVGASSALDLRNDEALLQTARAAELLAQRQRAQAMNAL 246 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G P T+ L Q S+ + I G+P+DL+ RPDIR E+ L + A IG Sbjct: 247 TLLVGQPLTD-LPPAQALSSQ---TILTDIPAGLPSDLLTQRPDIRSAEQTLLSANANIG 302 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P +SL + + + F G + WSF P+L LPIFD G+ + N+ AE Sbjct: 303 AARAAFFPRISLTAGLGTSSNELAGLFEGGSRSWSFAPQLVLPIFDAGRNRGNLNLAEVR 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++++ A +EV +AL + + + V + E + + ++ G S Sbjct: 363 KDIAVANYEKSIQVAFREVSDALVARDLLDQQVEAQRLVQEAQAERFKFATQRFQNGIAS 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD+LD +R ++ L + + VDLY ++G G Sbjct: 423 SLDVLDAQRELFTAQLSLVQVRLTRLTNAVDLYRSLGGG 461 >gi|299530224|ref|ZP_07043650.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298721881|gb|EFI62812.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 471 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 220/472 (46%), Gaps = 34/472 (7%) Query: 2 NILR-AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N +R A +L +LAGC+ P Y +P P+ P +S +S + ++ +L W + D Sbjct: 5 NTMRTATLTLIAAMLAGCSFAPTYERPAAPI-PGNWSAASSASAASMQSLHWKDFVIDER 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNST 117 L ++ AL N + Q + A+ RAD P A S R +L Sbjct: 64 LRSRIETALANNRDLRQTLLNVQTARAAYRVQRADQLPGLEAQASGNRQRLPADLSGTGA 123 Query: 118 GQLDSDWK---------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ S+++ +DLFG+ + E++L + ++++++++I + + Sbjct: 124 ARVQSNYQAGAGLMAFELDLFGRVSSLSEAALMEYLATEEAARSVQISLVAEVIQASLAQ 183 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++R ++A + L +K ++L + G S+L + + +++ +++ E+ R Sbjct: 184 DSARQRQALALRTLQAREKELQLMSERRKTGMASRLDEQEAQGQLEQARAEVERFERELR 243 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G +Q ++ L I G+P+DL+ RPDIR E +L Sbjct: 244 QAGNALDWLVGD------GRVQPAADLSATPLVQEIGPGLPSDLLVLRPDIRSAEYQLRA 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +P +SL GS + F G WSF P+L LPIFD G+ ++N+ Sbjct: 298 RNASIGAARAAFFPRISLTGSYGSASAELGDLFAGGQRSWSFMPQLSLPIFDGGRNRANL 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ +++ ++ A +EV +AL S+ ++ Q V+ ++ L+ + Y Sbjct: 358 EIAQLRKDMAIASYERSIQTAFREVSDALASVETLRREELARQRLVQTSANTLKLAELRY 417 Query: 405 RQGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L LD +R A +EV A+RQ+A L+ A+G G+ Sbjct: 418 RAGVDSHLRYLDAQRTDYAQQMALIEVS---AQRQMA--LATLFKALGGGWQ 464 >gi|17549421|ref|NP_522761.1| putative outer membrane CHANEL lipoprotein transmembrane [Ralstonia solanacearum GMI1000] gi|17431674|emb|CAD18351.1| putative outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum GMI1000] Length = 508 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 116/467 (24%), Positives = 221/467 (47%), Gaps = 35/467 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIAL 69 + C VGP+Y +P + P Q+ + G+ K D + KWWE F D LN L + Sbjct: 26 MTACAVGPDYKRPSADV-PQQYKETAGDWKVGTPSDAITRGKWWEIFGDAQLNALEEQVA 84 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQ--- 119 N IL A + A+ + S RA FP+ AS S +++T STG Sbjct: 85 AANQNILVAEAQYRQAQALVQSARAQFFPTISASASASRSRSVRTTTNADGSLSTGSPSI 144 Query: 120 -------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD+ W++DL+G+ RR +ES+ A+ +++ + A L+ + L Y R Sbjct: 145 TNTQSLTLDASWELDLWGRIRRTVESNKASAEASAGDLASALLSAQATLAQDYFQLRVTD 204 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + H Sbjct: 205 TQKAVLRRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQTQALLLDAEVTRAQLEH 264 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 I+ L+G + F + P IP+ I P+ ++ RPDI E+++A + Sbjct: 265 AIAVLIGKSPSAFSLAPVSAATAQELPPLPDIPLEI--PSTVLERRPDIAAAERRVAQAN 322 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG+AK+ +P+L+L S L+ + + P + WS GP L +F+ G + + + Sbjct: 323 ANIGVAKAAYFPTLTLGASAGLSANTLSRLATLP--SRIWSIGPTLAATLFEGGALNAAV 380 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L + Y Sbjct: 381 NKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQEAAQLDLNRY 440 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L+++ + E L + + + V L A+G G++ Sbjct: 441 RAGTISFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKALGGGWH 487 >gi|289208787|ref|YP_003460853.1| RND efflux system, outer membrane lipoprotein, NodT family [Thioalkalivibrio sp. K90mix] gi|288944418|gb|ADC72117.1| RND efflux system, outer membrane lipoprotein, NodT family [Thioalkalivibrio sp. K90mix] Length = 495 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 119/453 (26%), Positives = 209/453 (46%), Gaps = 16/453 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC VGP+Y +P + LP ++ IG+ + D WWE F D L++LV+ AL+ Sbjct: 12 ALLAGCAVGPDYERPEV-TLPDEWPEEIGDQMDTDYADAEFWWEMFEDPLLDRLVREALE 70 Query: 71 QNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST----GQLDSDW 124 N+ A R+ A+ + RA+ FP +A + T G L S + Sbjct: 71 NNIEAEIAAARVVQARAVLGLSRAEQFPQLDGFAEFEREYPAGDDDPETEIAIGTLLS-Y 129 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DL+G+ R E + A L + D +L V+S ++ +Y D R +E+I + Sbjct: 130 EVDLWGRLSRAEEGARAQLLNTAFTRDATRLAVVSDVVSTYFDYRATREQIETTEATILS 189 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--YPA 241 + +EL + GAT+ L++ + +AE+++ + +P L ++ L+G Sbjct: 190 QIEALELERSRRQSGATTDLTVRQAQAELETSRAGLPDLRADAAQQRRALAVLVGDTEAV 249 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E L + + P+ + +P+DL+ RPDIR E L + A IG+A+++ P Sbjct: 250 VEGLEGLGDEGLEDLPDTISGLPHSVPSDLMIRRPDIRAAEASLIAANADIGVARAEWLP 309 Query: 302 SLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 SL+L G + W F + +PI D G+ ++ I E+ + + Sbjct: 310 SLNLAALFGQEVSRVSQFSSSDSFFWEFLAESTVPILDFGRRRATIEGVEAERDIAELEY 369 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + + A++EV N + +N + V Q V + + L+ Y G L++LD Sbjct: 370 RAAIQEALEEVANTWSVLNAAHERVEVRQREVGARVEVLDLAERRYLGGFVGYLEVLDAR 429 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 RA + L+ A R + L+ A+G G++ Sbjct: 430 RALLDARLTLTEASRDRLAATATLFRALGGGWD 462 >gi|218703904|ref|YP_002411423.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli UMN026] gi|293403834|ref|ZP_06647828.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli FVEC1412] gi|298379611|ref|ZP_06989216.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli FVEC1302] gi|218431001|emb|CAR11877.1| copper/silver efflux system, outer membrane component [Escherichia coli UMN026] gi|291428420|gb|EFF01445.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli FVEC1412] gi|298279309|gb|EFI20817.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli FVEC1302] Length = 462 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 11 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------T 117 + AL N + AT ++ A+ AD +P S + NLK +S T Sbjct: 69 ISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFST 128 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 129 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 186 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 187 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 246 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 247 LLG----SYGKLPQAQTVNSHSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 302 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ T + +N W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 303 RAAFFPSISLTSGISTTSSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 362 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 363 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL 422 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 423 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 460 >gi|295677552|ref|YP_003606076.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295437395|gb|ADG16565.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 506 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 125/478 (26%), Positives = 222/478 (46%), Gaps = 43/478 (8%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIGN------------SKNLINIDTLKW 52 ++ ++ + LLA GCT+ P Y +P P+ T F G S N + W Sbjct: 5 SLIAVAVALLATGCTLAPHYQRPAAPVTAT-FPTGGVYDQQPGAQGERSANGQAAADIGW 63 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP 110 F D L +L++IAL+ N + + + A+ VRA LFP+ + AS S P Sbjct: 64 RNFFVDPRLQQLIEIALKNNRDLRVSVLNMQASAAQYRIVRAGLFPTLDAAASQSRSRTP 123 Query: 111 N---------LKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISK 159 T S G L++ W+ID FG+ + + + +LA L +A A+ A++ ++++ Sbjct: 124 KDLTFTGVTISNTYSVG-LNASWEIDFFGRVQSLKDQALATYLGTAQAR-KAAEIALVAQ 181 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ + + + L +++ ++ L+F G S+L L + + +++ +D+ Sbjct: 182 VANQYMTVLELDDLLKVTQNTLKTAQESFRITKLQFDNGTGSELDLRQAQTVVETASADL 241 Query: 220 PTLEKSFRMNVHNISTLL-GYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNR 275 T + R N LL G P L + QS L I G+P+DL+ R Sbjct: 242 QT-QTRLRAQADNALVLLIGEPLPADLPTGLPLNDQS------LLTDIPAGLPSDLLTRR 294 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYL 332 PDI E+ L + A IG A++ +P ++L GS ++ T F + WSF P + L Sbjct: 295 PDIMEAEENLLAANANIGAARAAFFPRVTLTGSAGTLSPTLGGLFKPGSAAWSFAPSITL 354 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ G+ +N+ A Q T+++ + A +EV + L + + + L+ V Sbjct: 355 PIFEGGQNMANLDLANIEKNVQIATYEKAIQTAFREVADGLAARGTYDEQIAALERDVAA 414 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + LS + Y G S L +L + + + L A+ ++ V LY A+G G+ Sbjct: 415 EQRRLDLSTLRYTNGVDSYLAVLTAQTSLYVAQQALVTARMGRLQNLVTLYQALGGGW 472 >gi|319779587|ref|YP_004130500.1| RND efflux system, outer membrane lipoprotein, NodT family [Taylorella equigenitalis MCE9] gi|317109611|gb|ADU92357.1| RND efflux system, outer membrane lipoprotein, NodT family [Taylorella equigenitalis MCE9] Length = 442 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 121/451 (26%), Positives = 227/451 (50%), Gaps = 35/451 (7%) Query: 20 VGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLK-------WWESFNDTSLNKLVKIALQQ 71 + PEY P + + + S +S + D +K WW +F D LN L+ + Sbjct: 1 MAPEYKVPDVYMTEKYKASFMSSSRWVAFDQIKFTEFNKPWWTAFEDKFLNTLINQLNIR 60 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-------- 123 N TI QA + A+ I S +A FPS S K+ + + +SD Sbjct: 61 NYTIEQAVAKYEASNAQIKSAQASYFPSVGLDASAS-----KSGGSNRAESDKFNYGSSL 115 Query: 124 -WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--SKLIPSYIDARHFKERISIAHQI 180 W+IDL+G+ ++++A LDS + I + ++ ++L +Y R +IS +I Sbjct: 116 KWEIDLWGKLSD-KTNIARLDSEIQSLTIEQTQLVLQAQLANTYFSLRETDVKISALEKI 174 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-ISTLLGY 239 + +K+ ++ + QG +K ++ + ++ + ++++ + S R+ + N ISTL+G Sbjct: 175 ISYLEKSNHINKNLYNQGVIAKADVISSDLQLLNAKAELVATQSS-RIQLENAISTLIGL 233 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 EF + +S ++ L I++ P+ L+ RPDI+ EK++ ++ KIG+ KS Sbjct: 234 TPGEF----RIESERYEL-LPAKISVSYPSLLLAMRPDIKIAEKRVQEANYKIGVVKSAW 288 Query: 300 YPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P+L+L+ S+A + ++ T WS GP L L IFD G ++ + A++ + Sbjct: 289 FPNLTLSASVANQAIAINDLISSPATVWSLGPALVLSIFDGGSKRAALNSAKADYRFSVA 348 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ETV+ AI++VENALT I K + A++ +KS+ ++ Y G S LD++ Sbjct: 349 VYRETVIEAIRDVENALTKIEMTSKELDLQSEALKASRKSLEITNNQYLAGLVSYLDVIQ 408 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ + E+ K +L ++ ++L A+G Sbjct: 409 VQNSNINAEIKNLNLKLKLVQNQIELIKALG 439 >gi|332185803|ref|ZP_08387550.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332014161|gb|EGI56219.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 497 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 218/479 (45%), Gaps = 49/479 (10%) Query: 18 CTVGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIALQQ 71 CTVGP Y P + P F+ ++ + +WW + ND L L + AL Sbjct: 16 CTVGPNYAGPPKGVGSAAQPPAGFARADASVATTAPAVAEWWTTLNDPMLTWLEEQALAA 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQ---------- 119 N + A R+ A+ ++ RA+ P++ AS + H +P + Q Sbjct: 76 NPNVAVAQARLKQARASLRLERANQAPNANASATYLHADLPGINLGGGQQQGGGEQGGGQ 135 Query: 120 -----------------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 D+ W+IDLFG QRR +E++ AN +A A V A+++ Sbjct: 136 GGANGGAAGGGSGGQSLDFFNLGFDASWEIDLFGGQRRTVEAARANAAAAEANVADAQVS 195 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y+ R ++R+ +A + + + + L+ +F G S+L + +L +++S Sbjct: 196 LSADVAQAYVGLRDAQQRLILAREASRMQRDTLNLTQQRFNNGTASQLEVERLRNQVEST 255 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ I L S ++ ++ L+G P T Q P + +G P L++ Sbjct: 256 DAQILPLSASVETYLNALAILIGEAPGTLDQRLGQAAPVPLPP---AQVAVGDPTSLLQR 312 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFG-PKLY 331 RPDIR E++LA A+IG+A++ +P L+L G I + T ++ + + G P L Sbjct: 313 RPDIRAAERRLAAQTARIGVAEAAKFPRLNLMGIIGIGGTSLDALTDLDNLVTLGAPMLQ 372 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + + G+ + + +AE + E ++ VL+A+++ E+AL + V L A Sbjct: 373 WNVLNFGRANARVGQAEGARDEAEAQYRGAVLSALRDAEDALARFRARRNTVATLARAKA 432 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S L YR G +L+D LD ER + LS A L YV L A+G G+ Sbjct: 433 SADRSAVLMQQRYRAGAATLIDTLDAERQRVSAQQSLSQAVAGLTNDYVALQKALGLGW 491 >gi|330981705|gb|EGH79808.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 490 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 228/466 (48%), Gaps = 32/466 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIA 68 LL+GC VGP+Y +P PL P ++ + + NI + WW+ F+D L+ V A Sbjct: 15 LLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPLVSAAWWDGFDDPLLSSFVSRA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFI-----------PNLK 113 L QNL + QA+ ++ A+ + A L PS + + +H+ + P Sbjct: 73 LAQNLDLAQASAQLAQARAGADAATAALLPSGNIDAQTARAHQSVETPLGQVLNSAPGYD 132 Query: 114 --TNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 NS L + W++D+FG RR +++LA ++ A V A+L V ++ +YI R Sbjct: 133 RYGNSYEANLTASWELDVFGGLRRSRQAALAEYQASQAGVAAARLAVAARTADTYIPIRG 192 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R++I ++ + + +E L +G + + ++EAE+ +++ +P L+ Sbjct: 193 LQARLAITNRQVKTRQDLLEKVQLLHERGLSPDYEVRQIEAELLQVQATVPILQTGLDAA 252 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ + +LG P H P+ + G PADL+R RPD+ E++LA S Sbjct: 253 MNALDVMLGVPPGT--HRGSLAETGRIPHAPALASTGTPADLLRRRPDLIVAERRLAASN 310 Query: 290 AKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A S+ YP LSL+ + A++ N F G + + L +FD G++ + I Sbjct: 311 ARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGILGLRWRLFDFGRVNARIS 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A+ E ++++VL A ++VEN +S+ + L + + S +Y Sbjct: 371 QAKGQEAEALAAYRQSVLRATEDVENTFSSLASRETQAAMLGKSETALASARQSSFASYS 430 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G SL+++L + +V + A + A++ V ++ A+G G+ Sbjct: 431 KGAASLVEVLRADEKMLQVADAKAQAHVESAQAAVAVFKALGGGWQ 476 >gi|94265217|ref|ZP_01288978.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] gi|93454307|gb|EAT04617.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] Length = 507 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/461 (25%), Positives = 233/461 (50%), Gaps = 29/461 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLIN---IDTL---KWWESFNDTSLNKLVKIALQQ 71 C +GP+Y +P + P + + + D L +WW ++D L++L + A Sbjct: 45 CALGPDYQRPAIDT-PDDYRYQAGEEGVAPLPADELPKGEWWRLYDDPVLDELQRRAAAG 103 Query: 72 NLTILQATERINAAK------ENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----L 120 N + A R+ A+ + L R DL PS+ S + + + ST L Sbjct: 104 NRELQSALARLEQARAAARISDADLLPRLDLQPSAQRSRTPEDLAFMGAASTSSTINLPL 163 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D +++DL+G+ RR +++ A+ ++ A+V+ +L + ++ +Y + + + + Sbjct: 164 DLGYELDLWGRLRRQSQAAGADFAASAAEVENFRLLLHGEVARTYFALQTLDHELRLLEK 223 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++L ++N+ L + ++ G +L+L + E+E+ E+++ L + H ++ LLG Sbjct: 224 TVELRRQNLRLINSRYAGGLVDRLALSQAESEVGQAEAELIALRQQRAEFEHALALLLGE 283 Query: 240 PATEFL----HYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 ++ F + ++ + +IP I+ G+PA L++ RPD+ E++L + A+IG Sbjct: 284 SSSRFALPRREHDDTETGDKALTRHIPTIDPGLPAALLQRRPDVAAAERRLMAASARIGA 343 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AKS +P++ L GS + PG N WS G +L P+ D G+ ++ + +AE++ Sbjct: 344 AKSAFFPTIRLTGSAGFGSNELATLLNPG-NRLWSLGGQLAQPVLDGGRSRAGLEQAEAA 402 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E+ +++T+L A KEV++AL ++ ++ Q A+ ++S+ LS YR G S Sbjct: 403 YFEELANYRQTILQAFKEVDDALLALKLLEQQQQAQQRALGATRQSVELSRQRYRAGLVS 462 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L+ ERA +E + Q ++ + L A+G G+ Sbjct: 463 YLEVLESERAALGLERAVLNTAGQRLQANLSLIKALGGGWR 503 >gi|257484818|ref|ZP_05638859.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 445 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/416 (27%), Positives = 197/416 (47%), Gaps = 22/416 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-- 109 WW + D L++LV+ A+ N + A + A+ A ++ A I + + Sbjct: 27 WWRLYQDARLDELVRQAIASNTDLRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQE 86 Query: 110 -----------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 P G L + ++ DLFG +R IE++ AN+D+ A VD A++ V+ Sbjct: 87 SGEAFLLTDKVPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARVTVV 145 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ +Y E + IA + LDL ++++ L+ G + + + + + KS+ + Sbjct: 146 ADVVRAYTQICAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRA 205 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++P E + + +S LL P + + S N P++ + +G A L++ RPD Sbjct: 206 EMPLYEARRQAAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPD 263 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPI 334 +R E+ LA S A+IG+A +LYP +S+ SI T + P N W FGP L I Sbjct: 264 VRQAERHLAMSTAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTI 322 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 G ++ I +AE+SAQ + VLNAI+E + L L+ A + K Sbjct: 323 PSNGS-RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAK 381 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + Y+ GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 382 EAADQTHRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLALGGGW 437 >gi|323963249|gb|EGB58815.1| NodT family protein efflux transporter [Escherichia coli H489] Length = 457 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAKL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|299140046|ref|ZP_07033216.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298598046|gb|EFI54214.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 476 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 119/461 (25%), Positives = 228/461 (49%), Gaps = 37/461 (8%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P P P Q + G + + +I +W E F + L L++ AL N Sbjct: 27 GCNVGPKYKRPVYPAPPAFQGADGILVDGDSQTSIGDRQWTEVFREPELQGLIRTALANN 86 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQ---------LD 121 + A +RI + + R+ FP+ A + IP+L + + L+ Sbjct: 87 YDVRIAAQRILEQQAQVQVARSQQFPTITAGGTGIGVDIPSLGSGGSFSSPIAEGLFALN 146 Query: 122 SDWKIDLFG-QRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W D +G R+ E++ L +AQ + ++ +I ++ +Y+ R +++ I Q Sbjct: 147 ASWTPDFWGLYRKQAEAARDQLLAQVWAQRAV-RMTLIESVVTTYVQLRALDKQLEITKQ 205 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVK-LEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L + + +++L+ + +G ++ LS V+ E + + S IP +E+ + + +S LLG Sbjct: 206 TLKVRQDSVQLTT-ELERGGSAPLSDVRQAEQLLFTATSQIPQIEQQIQQQENTLSLLLG 264 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 H PN P + G+P+ L+ RPDI E L + A +G+ Sbjct: 265 ANPGPIAHT--------DPNALTPPPESLPTGLPSQLLERRPDIGQAEATLKAANANVGV 316 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFG-PKLYLPIFDKGKIKSNIRRAESS 350 A++ +P LSL+ + + D SFP G N+ G +L PIF+ GK+ ++ +E++ Sbjct: 317 ARAQFFPQLSLSAAAGVGGD-SFPTIFGSNSRTIAGLGQLAQPIFEGGKLHGQLKLSEAT 375 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE +++Q+T+ A+++V NAL + N+ + + + V + + L+ + Y+ G + Sbjct: 376 KQEMVLSYQKTIAGALRDVSNALVASNKQRAYREQQEKLVGSAQDATRLARLRYQGGATA 435 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + +++L+IA++ A + V LY A+G G+ Sbjct: 436 YLEVLTTDSNLFAAQLNLAIAEQSEALTLVGLYSALGGGWQ 476 >gi|332875196|ref|ZP_08443029.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6014059] gi|332736640|gb|EGJ67634.1| outer membrane efflux protein OprC [Acinetobacter baumannii 6014059] Length = 469 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 125/477 (26%), Positives = 223/477 (46%), Gaps = 50/477 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLN 62 +LLAGC++ PEY +P ++P +F + K N + +WW +ND LN Sbjct: 4 LLLAGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLN 62 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 +L + A+ N + I A++ + +A+ PS I F P + S L Sbjct: 63 ELEQQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGL 118 Query: 123 D----------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D W+ +DLFG+ + ++ A+L A A L + + + Sbjct: 119 DDNAHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQG 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R +I ++ + L + +L L+F G S+L + + + E+ + ++ + Sbjct: 179 YFLIRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLGSELDVSRAQTELATAQTTALNIA 238 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ Sbjct: 239 RNRASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAER 293 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPI 334 +A A+IGIA++ +P LSL G AL +++S WS GP L LP+ Sbjct: 294 AMAADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPL 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + Sbjct: 352 FDGGQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSR 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 412 HANQLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 468 >gi|167033338|ref|YP_001668569.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166859826|gb|ABY98233.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 496 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 226/474 (47%), Gaps = 44/474 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + LL+ CT+ P+Y +P + QF + I WWE + D LN L Sbjct: 27 GLCVALLSACTLSPDYHRPELNSSAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNAL 86 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q+ + A+ + S RA LFPS S S N TG Sbjct: 87 VEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSASK----NRSAQGTGSSSSSL 142 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ ++++A + +L+ S+L+ +Y Sbjct: 143 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETMNANEASAEASFADLASIRLSQQSELVQNY 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y++++ ++ ++ G ++ + ++KS ++D+ L Sbjct: 203 LQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIW 262 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ LLG +F K P L IP+++ P+ L+ RPDI E+ Sbjct: 263 QRAQFENAIAVLLGKAPADFALADSKAI----PALPQIPVSL--PSQLLERRPDIAAAER 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A IG++++ +P LSL+ S + N N +WS GP+L L +FD GK Sbjct: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 + + R + + +++TVL+ KEVEN L + D+ +V Q A++ ++S+ Sbjct: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFKEVENLLVQLKVYGDEAVVR--QEALDAARESLR 434 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 435 LTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLVAALGGGWD 487 >gi|218130519|ref|ZP_03459323.1| hypothetical protein BACEGG_02108 [Bacteroides eggerthii DSM 20697] gi|217987305|gb|EEC53635.1| hypothetical protein BACEGG_02108 [Bacteroides eggerthii DSM 20697] Length = 471 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/457 (25%), Positives = 232/457 (50%), Gaps = 27/457 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L VL A C VG Y +P M +LP S+ ++ +I +W + D +L L+ AL Sbjct: 24 LIPVLFASCKVGKSYVRPEM-VLPD--SLAQQQDSASIADEQWQAVYTDNTLRSLIDRAL 80 Query: 70 QQNLTILQATERI-NAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQLDS----- 122 + N +L A R+ A + +SV A+L P + + R + N +S ++ Sbjct: 81 EYNKDMLIAAARVKEMAAQKRISV-ANLLPQLNGRVEAEREVENHGGHSRDVGNTYEAKA 139 Query: 123 --DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DL+G R +++ L S AQ + ++ ++S++ +Y + + I Sbjct: 140 LLSWELDLWGNLRWKKAAAVAEYLQSVEAQRAL-RMTIVSEVAQAYYELVALDTELEIVR 198 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G Sbjct: 199 QTQKAREEGVRLARIRFEGGLTSETSYQQAQVELARTATLVPDLERKISIKENDIAFLAG 258 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 EF +++ + F L +P + +G+P+ L+ RPD+R E++L A++ +A Sbjct: 259 ----EFPTRIER--SRFLQELDVPESLPVGLPSGLLERRPDVRAAEQQLIAEHARVKVAY 312 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 ++++P LSL G L D + +S + P+F+ GK ++ ++ ++S + + Sbjct: 313 TNMFPRLSLTGQFGLESDVLSNFLQSPYSLLNGAVLTPLFNWGKNRAALKAQKASFEAEV 372 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDI 414 ++++ VLNA KE +NA+ N+ K+ V +L+ +E K+ + L+ + Y G + +D+ Sbjct: 373 HSYEKAVLNAFKEAKNAIVDFNKIKE-VYQLRLKLERSAKTYVELAQLQYINGVINYMDV 431 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R ++ +S A R + V++Y A+G G+ Sbjct: 432 LDAQRGYFDAQIGVSNAIRDELIAVVNVYKALGGGWQ 468 >gi|70729924|ref|YP_259663.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68344223|gb|AAY91829.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 470 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 115/462 (24%), Positives = 215/462 (46%), Gaps = 37/462 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKN------LINIDTLKWWESFNDTSLNKLVKIALQ 70 GC++ P Y P + L P Q+ NS + +WW + D LN L + LQ Sbjct: 18 GCSLAPHYQVPPIDL-PAQYREQNSDGPWHPAATPQVIAEQWWLLYQDPRLNDLQQRLLQ 76 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPNLKTNST 117 N + A + A+ ++A LFP AS + P++ ++T Sbjct: 77 ANPDLAAALAHYDGAQAYASQLQAGLFPQISASAQPLRQRQSDNRPLRGSTQPSVYNSNT 136 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFKERISI 176 +DL+G+ R+ ++ A + A+L++ +L Y+ + I Sbjct: 137 AGFALGLDLDLWGRIRNQAAAGDAQAQASGDDLAAARLSLQKQLASLYVQLNGLDAQSRI 196 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L+ Y + ++L+ ++ S+L L + ++++ S E+++ + + H I L Sbjct: 197 LSHSLEDYAQALQLTRDRYQGQIASELDLTRAQSQLASAEAELDEVRAQRNLTEHAIGEL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPN---LYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +G PA++F + P+ L +P I +P+ L++ RPDI E+++ + A I Sbjct: 257 VGEPASQF---------HLAPSAQLLSLPSIPQQLPSTLLQRRPDIAAAERRVYAANAGI 307 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 GIA + YP SL G + N N +W+ GP + LPIFD G++ +N R+A + Sbjct: 308 GIAHAAWYPDFSLTGMLGGQTQGVGNLLAAGNRYWALGPLVNLPIFDGGRLSANERQAHA 367 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E ++ VL A++EVE+ L + + + Q AV + + +L+M +Y+ G Sbjct: 368 EFEEAAAHYRGQVLRAVREVEDNLGQLRDLHQEALDQQAAVNAAEHTQTLAMNSYQAGAV 427 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S LD++ + A + + L + + ++ V L +A+G G+N Sbjct: 428 SYLDVVTAQTAALQAQRGLQAVQTRELQASVGLVVALGGGWN 469 >gi|194437451|ref|ZP_03069548.1| cation efflux system protein CusC [Escherichia coli 101-1] gi|253774450|ref|YP_003037281.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160648|ref|YP_003043756.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli B str. REL606] gi|194423620|gb|EDX39610.1| cation efflux system protein CusC [Escherichia coli 101-1] gi|242376343|emb|CAQ31039.1| outer membrane factor of the CusCFBA copper/silver efflux system, subunit of copper/silver transporting efflux system [Escherichia coli BL21(DE3)] gi|253325494|gb|ACT30096.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972549|gb|ACT38220.1| copper/silver efflux system, outer membrane component [Escherichia coli B str. REL606] gi|253976743|gb|ACT42413.1| copper/silver efflux system, outer membrane component [Escherichia coli BL21(DE3)] Length = 457 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|327254249|gb|EGE65871.1| cation efflux system protein cusC [Escherichia coli STEC_7v] Length = 450 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 221/454 (48%), Gaps = 28/454 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 L GC++ PEY +P MP+ P QFS+ + + +D + W F D + L+ AL Sbjct: 5 LTGCSLAPEYQRPAMPV-PQQFSLSQNGLVNAVDNYQNAGWRTFFVDNQVKTLISEALVN 63 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDW 124 N + AT ++ A+ AD +P S + NLK +S TG L++ + Sbjct: 64 NRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASF 122 Query: 125 KIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + L Sbjct: 123 DLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLR 181 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 182 NYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG---- 237 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ +PS Sbjct: 238 NYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPS 297 Query: 303 LSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + ++ Sbjct: 298 ISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYE 357 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD ER Sbjct: 358 QKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAER 417 Query: 420 ---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 AT + +DL+ A RQ+ + V LY A+G G+ Sbjct: 418 SLFATRQTLLDLNYA-RQVNE--VSLYTALGGGW 448 >gi|15800285|ref|NP_286297.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 EDL933] gi|15829864|ref|NP_308637.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 str. Sakai] gi|168747765|ref|ZP_02772787.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4113] gi|168754664|ref|ZP_02779671.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4401] gi|168760287|ref|ZP_02785294.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4501] gi|168770167|ref|ZP_02795174.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4486] gi|168774626|ref|ZP_02799633.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4196] gi|168779054|ref|ZP_02804061.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4076] gi|168786411|ref|ZP_02811418.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC869] gi|168798124|ref|ZP_02823131.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC508] gi|195936117|ref|ZP_03081499.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 str. EC4024] gi|208808348|ref|ZP_03250685.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4206] gi|208816145|ref|ZP_03257324.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4045] gi|208823189|ref|ZP_03263507.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4042] gi|209399978|ref|YP_002269203.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4115] gi|217325885|ref|ZP_03441969.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. TW14588] gi|254791737|ref|YP_003076574.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 str. TW14359] gi|261224037|ref|ZP_05938318.1| copper/silver efflux system, outer membrane component [Escherichia coli O157:H7 str. FRIK2000] gi|261257731|ref|ZP_05950264.1| copper/silver efflux system, outer membrane component [Escherichia coli O157:H7 str. FRIK966] gi|291281522|ref|YP_003498340.1| Cation efflux system protein cusC precursor [Escherichia coli O55:H7 str. CB9615] gi|48474563|sp|Q8XBY3|CUSC_ECO57 RecName: Full=Cation efflux system protein CusC; Flags: Precursor gi|12513457|gb|AAG54905.1|AE005237_1 putative resistance protein [Escherichia coli O157:H7 str. EDL933] gi|13360068|dbj|BAB34033.1| putative resistance protein [Escherichia coli O157:H7 str. Sakai] gi|187769775|gb|EDU33619.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4196] gi|188017641|gb|EDU55763.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4113] gi|189002823|gb|EDU71809.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4076] gi|189358105|gb|EDU76524.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4401] gi|189360850|gb|EDU79269.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4486] gi|189369081|gb|EDU87497.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4501] gi|189373634|gb|EDU92050.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC869] gi|189379308|gb|EDU97724.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC508] gi|208728149|gb|EDZ77750.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4206] gi|208732793|gb|EDZ81481.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4045] gi|208737382|gb|EDZ85066.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4042] gi|209161378|gb|ACI38811.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. EC4115] gi|209777728|gb|ACI87176.1| putative resistance protein [Escherichia coli] gi|209777730|gb|ACI87177.1| putative resistance protein [Escherichia coli] gi|209777732|gb|ACI87178.1| putative resistance protein [Escherichia coli] gi|209777734|gb|ACI87179.1| putative resistance protein [Escherichia coli] gi|209777736|gb|ACI87180.1| putative resistance protein [Escherichia coli] gi|217322106|gb|EEC30530.1| cation efflux system protein CusC [Escherichia coli O157:H7 str. TW14588] gi|254591137|gb|ACT70498.1| copper/silver efflux system, outer membrane component [Escherichia coli O157:H7 str. TW14359] gi|290761395|gb|ADD55356.1| Cation efflux system protein cusC precursor [Escherichia coli O55:H7 str. CB9615] gi|320192976|gb|EFW67616.1| Cation efflux system protein CusC precursor [Escherichia coli O157:H7 str. EC1212] gi|320638019|gb|EFX07783.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 str. G5101] gi|320643425|gb|EFX12595.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H- str. 493-89] gi|320648760|gb|EFX17387.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H- str. H 2687] gi|320654346|gb|EFX22393.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660134|gb|EFX27661.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O55:H7 str. USDA 5905] gi|320664823|gb|EFX31958.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O157:H7 str. LSU-61] gi|326341323|gb|EGD65115.1| Cation efflux system protein CusC precursor [Escherichia coli O157:H7 str. 1044] gi|326345900|gb|EGD69639.1| Cation efflux system protein CusC precursor [Escherichia coli O157:H7 str. 1125] Length = 460 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL+ N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALENNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTVLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|170734643|ref|YP_001773757.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169820681|gb|ACA95262.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 486 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/430 (25%), Positives = 203/430 (47%), Gaps = 32/430 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P QF ++ + D WW F D L + + +AL QN Sbjct: 18 GCAVGPDYARPDVAM-PRQFQGQRAVDQRHAAADADLATWWTGFGDPQLTRYITLALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T N+T D Sbjct: 77 LDLAQAAARVAQARAGLGAANAALLPSGNVSGQAARVYQSVETPLGQVLNATPGFDRHGN 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ +YI R + R Sbjct: 137 DYEADFNASWELDVFGGLRRGREAALADYQASEAAAVATRLAVAAQTADTYITIRGLQGR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + +L + +G ++L + + E + + + +P LE + ++ + Sbjct: 197 LDVARHQVQTEQDLLSTLNLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDAAMNAL 256 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A S A+I Sbjct: 257 DVMLGTQPGTHRAELLAGGEIPVTPRIAA---TGTPGELLRRRPDLIAAERRVAASNARI 313 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL G I + N F G + L +FD G+I + I +A+ Sbjct: 314 GVAIAEYYPKFSLGGLIGSATTIGAGNLFAGGANQAAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 374 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAILGDGVKSLGRARAASFAAYQKGV 433 Query: 409 YSLLDILDIE 418 SL+++L + Sbjct: 434 VSLIEVLQAD 443 >gi|94266785|ref|ZP_01290451.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] gi|93452554|gb|EAT03137.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] Length = 507 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/461 (25%), Positives = 233/461 (50%), Gaps = 29/461 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLIN---IDTL---KWWESFNDTSLNKLVKIALQQ 71 C +GP+Y +P + P + + + D L +WW ++D L++L + A Sbjct: 45 CALGPDYQRPAIDT-PDDYRYQAGEEGVAPLPADELPKGEWWRLYDDPVLDELQRRAAAG 103 Query: 72 NLTILQATERINAAK------ENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----L 120 N + A R+ A+ + L R DL PS+ S + + + ST L Sbjct: 104 NRELQSALARLEQARAAARISDADLLPRLDLQPSAQRSRTPEDLAFMGAASTSSTINLPL 163 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D +++DL+G+ RR +++ A+ ++ A+V+ +L + ++ +Y + + + + Sbjct: 164 DLGYELDLWGRLRRQSQAAGADFAASAAEVENFRLLLHGEVARTYFALQTLDHELRLLEK 223 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++L ++N+ L + ++ G +L+L + E+E+ E+++ L + H ++ LLG Sbjct: 224 TVELRRQNLRLINSRYAGGLVDRLALSQAESEVGQAEAELIALRQQRAEFEHALALLLGE 283 Query: 240 PATEFL----HYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 ++ F + ++ + +IP I+ G+PA L++ RPD+ E++L + A+IG Sbjct: 284 SSSRFALPRREHDDTETGDKALTRHIPTIDPGLPAALLQRRPDVAAAERRLMAASARIGA 343 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AKS +P++ L GS + PG N WS G +L P+ D G+ ++ + +AE++ Sbjct: 344 AKSAFFPTIRLTGSAGFGSNELATLLNPG-NRLWSLGGQLAQPVLDGGRSRAGLEQAEAA 402 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E+ +++T+L A KEV++AL ++ ++ Q A+ ++S+ LS YR G S Sbjct: 403 YFEELANYRQTILQAFKEVDDALLALKLLEQQQQAQQRALGATRQSVELSRQRYRAGLVS 462 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L+ ERA +E + Q ++ + L A+G G+ Sbjct: 463 YLEVLESERAALGLERAVLNTAGQRLQANLSLIKALGGGWR 503 >gi|331651578|ref|ZP_08352597.1| cation efflux system protein CusC [Escherichia coli M718] gi|331049856|gb|EGI21914.1| cation efflux system protein CusC [Escherichia coli M718] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL+ N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALENNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|293408695|ref|ZP_06652534.1| conserved hypothetical protein [Escherichia coli B354] gi|291471873|gb|EFF14356.1| conserved hypothetical protein [Escherichia coli B354] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 223/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------T 117 + AL N + AT ++ A+ AD +P S + NLK +S T Sbjct: 67 ISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|293413869|ref|ZP_06656518.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli B185] gi|291433927|gb|EFF06900.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli B185] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL+ N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALENNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNGGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|90409727|ref|ZP_01217744.1| putative outer membrane protein [Photobacterium profundum 3TCK] gi|90329080|gb|EAS45337.1| putative outer membrane protein [Photobacterium profundum 3TCK] Length = 500 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 122/483 (25%), Positives = 219/483 (45%), Gaps = 44/483 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------------WWESF 56 + + L GC VGP+Y KP + T++ ++ + D K WW F Sbjct: 12 VLALTLTGCAVGPDYQKPEH-TIDTEYLYQDTNGTVQDDQQKVQSQLYTQQNNTPWWYQF 70 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHR-- 107 +DT LN+LV QQN+ + A ERI AA+ ++ + P+ S A S Sbjct: 71 DDTVLNQLVADVQQQNIPLKMAAERIKAAQAYQHAIESFKVPTVSLGAGYSTAQFSDNDP 130 Query: 108 ------------FIPNLKTNSTGQLDSD---WKIDLFGQRRHIESSLANLDSAYAQVDIA 152 +P + +G W++DLFG R ++ A++ A + Sbjct: 131 LLGPVVSANNPLGVPLMDAKQSGFFAGATIAWEVDLFG-RIDSQAQAASIRKEQAIIFRE 189 Query: 153 KLN--VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 LN + + +I +Y+ R +ER +IA Q + K + L G S+L L + +A Sbjct: 190 GLNTAITADVIHNYLQMRGAQERKTIAMQTVKDQKSTLVLVQKVLASGYGSELDLARAKA 249 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + ++ +P L + ++ ++ LLG ++ ++K S N P + I +G+P+D Sbjct: 250 MFAASKAVVPQLATAENVHRQRLAILLGDTPSQMHKRLKKTSANKMPEMSGLIPVGLPSD 309 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFG 327 L++ RPD+R E+++A ++G A + YP L G+ +A D+ F +T W Sbjct: 310 LLQRRPDLRIAEREMAAINEELGAAIAAKYPKFFLTGAPGLVASNFDDVFSSGSTAWIAS 369 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + IFD G+ + + E+ Q +T+Q V NAI EVE L ++ + + Sbjct: 370 VGVSWNIFDGGRSDAMVDIQEARFQNSALTYQYAVNNAIGEVETLLQGYGNSQEYQSLVL 429 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + +++S + Y G L +LD +R ++ + A+ Q A+ V L+ A+G Sbjct: 430 ESKQQTDRAVSKAESLYEAGLVDYLSVLDAQRQQHLLQDRVVTARLQTAQIAVGLHKALG 489 Query: 448 SGY 450 + Sbjct: 490 GNW 492 >gi|110640802|ref|YP_668530.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 536] gi|191172350|ref|ZP_03033892.1| cation efflux system protein CusC [Escherichia coli F11] gi|110342394|gb|ABG68631.1| probable outer membrane efflux protein [Escherichia coli 536] gi|190907449|gb|EDV67046.1| cation efflux system protein CusC [Escherichia coli F11] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRELS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|26246550|ref|NP_752589.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli CFT073] gi|227884450|ref|ZP_04002255.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 83972] gi|48474444|sp|Q8CWA4|CUSC_ECOL6 RecName: Full=Cation efflux system protein CusC; Flags: Precursor gi|26106949|gb|AAN79133.1|AE016757_37 Probable outer membrane lipoprotein cusC precursor [Escherichia coli CFT073] gi|227838536|gb|EEJ49002.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 83972] gi|307552443|gb|ADN45218.1| cation efflux system protein CusC [Escherichia coli ABU 83972] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|157156221|ref|YP_001461734.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli E24377A] gi|193063363|ref|ZP_03044453.1| cation efflux system protein CusC [Escherichia coli E22] gi|193069023|ref|ZP_03049981.1| cation efflux system protein CusC [Escherichia coli E110019] gi|194428000|ref|ZP_03060545.1| cation efflux system protein CusC [Escherichia coli B171] gi|209917827|ref|YP_002291911.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli SE11] gi|218553113|ref|YP_002386026.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli IAI1] gi|218694012|ref|YP_002401679.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 55989] gi|256020523|ref|ZP_05434388.1| copper/silver efflux system outer membrane protein CusC [Shigella sp. D9] gi|260842797|ref|YP_003220575.1| copper/silver efflux system protein CusC [Escherichia coli O103:H2 str. 12009] gi|293418683|ref|ZP_06661118.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli B088] gi|307315261|ref|ZP_07594838.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli W] gi|331666918|ref|ZP_08367792.1| cation efflux system protein CusC [Escherichia coli TA271] gi|331676224|ref|ZP_08376936.1| cation efflux system protein CusC [Escherichia coli H591] gi|332281704|ref|ZP_08394117.1| copper/silver efflux system outer membrane protein CusC [Shigella sp. D9] gi|157078251|gb|ABV17959.1| cation efflux system protein CusC [Escherichia coli E24377A] gi|192930947|gb|EDV83551.1| cation efflux system protein CusC [Escherichia coli E22] gi|192957567|gb|EDV88012.1| cation efflux system protein CusC [Escherichia coli E110019] gi|194413975|gb|EDX30252.1| cation efflux system protein CusC [Escherichia coli B171] gi|209911086|dbj|BAG76160.1| conserved hypothetical protein [Escherichia coli SE11] gi|218350744|emb|CAU96436.1| copper/silver efflux system, outer membrane component [Escherichia coli 55989] gi|218359881|emb|CAQ97424.1| copper/silver efflux system, outer membrane component [Escherichia coli IAI1] gi|257757944|dbj|BAI29441.1| copper/silver efflux system protein CusC [Escherichia coli O103:H2 str. 12009] gi|291325211|gb|EFE64626.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli B088] gi|306905359|gb|EFN35898.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli W] gi|315059825|gb|ADT74152.1| copper/silver efflux system, outer membrane component [Escherichia coli W] gi|323379608|gb|ADX51876.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli KO11] gi|323945143|gb|EGB41204.1| NodT family protein efflux transporter [Escherichia coli H120] gi|324116645|gb|EGC10560.1| NodT family protein efflux transporter [Escherichia coli E1167] gi|331066142|gb|EGI38026.1| cation efflux system protein CusC [Escherichia coli TA271] gi|331076282|gb|EGI47564.1| cation efflux system protein CusC [Escherichia coli H591] gi|332104056|gb|EGJ07402.1| copper/silver efflux system outer membrane protein CusC [Shigella sp. D9] Length = 460 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|170700333|ref|ZP_02891345.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170134767|gb|EDT03083.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 493 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 119/485 (24%), Positives = 215/485 (44%), Gaps = 47/485 (9%) Query: 4 LRAIFSLFI----VLLAGCTVGPEYTKPHMPLL--------PTQFSIGNSKNLINIDTLK 51 + A F LF + LA C VGP++ +P P + DT+ Sbjct: 1 MSAAFRLFALATSMTLAACAVGPDFKRPDTASAARFARDAHPATQDAAPPDASADADTV- 59 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRF- 108 +W F D L +L+ AL N + A R +A+ + D +P+ AS I H+ Sbjct: 60 FWRGFGDPVLTQLIDAALAANQDLQVAVSRYDASNALLSQATFDRYPTITASGQIGHQLT 119 Query: 109 -------IPNLKTN---STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 +P + + S+ +++ W++DLFG+ RR IES A ++ A V ++ + Sbjct: 120 SKDQAFGVPRSQRDTPISSVGINAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIA 179 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ +Y+D R +ER+ IA + + K+ + L + + G S+L + A+ +S S Sbjct: 180 GEVARTYVDLRGSQERLRIARENAENQKQTLALINARVGAGRGSELDAARARAQYESTTS 239 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ--KQSNNFQPNLYIPINIGIPADLIRNR 275 I E + + H ++ L G + K P L I+ G P DL+ R Sbjct: 240 RIAVYEAAIGADEHRLAVLTGQTPDALIGRFDTPKGVPAPLPALAADIDPGTPGDLLLRR 299 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA----------LTHDNSFPGYNTHWS 325 PD+ + +L + A++G+A +DL+P +L G + D + WS Sbjct: 300 PDVAAAQARLHAATARVGVATADLFPRFTLAGLLGSATSSYGFFRAGSDTNLIALGIDWS 359 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 F D G++++ I +++ A Q +++TVL A++E ENAL + + Sbjct: 360 F--------LDVGRVRARIAASDAEAAGQLAQYRQTVLGALEETENALLRVARTRDETAH 411 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L A + ++ L+ + G ++LD +R + + + A+ + A S V LY A Sbjct: 412 LVRAADDSARAAQLAQTRFSAGAIDYYEVLDAQRTLLQAQDAAADARMRSATSTVALYKA 471 Query: 446 IGSGY 450 + G+ Sbjct: 472 LAGGW 476 >gi|320198301|gb|EFW72905.1| Cation efflux system protein CusC precursor [Escherichia coli EC4100B] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|303326407|ref|ZP_07356850.1| RND efflux system, outer membrane protein, NodT family [Desulfovibrio sp. 3_1_syn3] gi|302864323|gb|EFL87254.1| RND efflux system, outer membrane protein, NodT family [Desulfovibrio sp. 3_1_syn3] Length = 517 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 217/455 (47%), Gaps = 37/455 (8%) Query: 22 PEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQA 78 P Y +P + P Q+ +G++ +N D WW FND L +V+ AL+ N + ++ Sbjct: 36 PRYERPGQDI-PEQWRKVDLGSTP--LNTD---WWTRFNDPVLTAMVEEALKNNQDLAES 89 Query: 79 TERINAAKENILSVRADLFPS-----------------SYASISHRFIPNLKTNSTGQLD 121 +I++A + + L PS +Y++++ R TN G L+ Sbjct: 90 LAKIDSAAAQVGIATSQLLPSVSGDAAATSQSSSTKIANYSTLADRS----NTNYQGSLN 145 Query: 122 SDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++D +G+ R+ ++L++ L + + +L+V + Y ++ A + Sbjct: 146 ASWELDFWGKYRNNYTALSDVLMNTVVGHEALRLSVAGQTAQGYFALLALDMQLDTARRT 205 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + + ++ QG ++L + AE+++ + + T S ++ LLG Sbjct: 206 LKSREDAFGIYTSRYKQGDITELDWQRARAEVETARAQVHTSTVSVDQAEAALAVLLGRS 265 Query: 241 ATEFLHYM--QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + ++ + Q+ P+ + + G+P++L+ RPD+R E + A IG+A++ Sbjct: 266 PRDIINRAMPRGQAIGMLPSPPV-LPEGLPSELLERRPDVRAAEYMIMAYNANIGVARAQ 324 Query: 299 LYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS+SL G +++ N F G WS+G LPI D G+ N++ AE+ + Sbjct: 325 FFPSISLTGMLGTLSAAVGNLFTGPAGAWSYGATGTLPILDFGRNWYNLKDAEAQKKAAI 384 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++TV A K++ +LTS E IV +Q VE ++S+ ++ + Y G L +L Sbjct: 385 AVYRKTVQVAFKDIRTSLTSQREADAIVRSMQIQVESLRRSVDIARLQYDNGYTDYLTVL 444 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D ER E+ L+ A R + V + +A+G G+ Sbjct: 445 DAERQLFAAELQLASALRDRLDAVVSVCMALGGGW 479 >gi|194432539|ref|ZP_03064825.1| cation efflux system protein CusC [Shigella dysenteriae 1012] gi|194419100|gb|EDX35183.1| cation efflux system protein CusC [Shigella dysenteriae 1012] gi|332085787|gb|EGI90951.1| cation efflux system protein cusC [Shigella dysenteriae 155-74] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------ST 117 + AL N + AT ++ A+ AD +P S + NLK N ST Sbjct: 67 ISEALVNNRDLRMATLKVREAQAQYRLADADRYPQLSGEGSGSWSGNLKGNTATTRELST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|331645729|ref|ZP_08346832.1| cation efflux system protein CusC [Escherichia coli M605] gi|330910331|gb|EGH38841.1| cation efflux system protein CusC precursor [Escherichia coli AA86] gi|331044481|gb|EGI16608.1| cation efflux system protein CusC [Escherichia coli M605] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRELS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|160895948|ref|YP_001561530.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160361532|gb|ABX33145.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 485 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 22/458 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVKIA 68 VLLAGC++ P Y +P P+ Q++ N+ T L W + F D L +LV+ A Sbjct: 14 VLLAGCSLIPTYERPAAPV-AAQYTRANATAAAEGGTAAAQLPWQDFFQDARLQQLVRTA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 L N + A I A+ RAD FP+ A ++ PN + ++S Sbjct: 73 LDNNRDLRVAALNIERAQAQYRITRADQFPTVGAGVNASRAPNTTGSGAKYVNSYQVGLA 132 Query: 123 --DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++D FG+ + E++LA + A+ ++++ + + ++ + I+ Sbjct: 133 VTSWELDFFGRIGSLKEAALAQYLATEEARRAAQTSLVAAVASGWYTLLADEQLLKISRD 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L +++I+L+ L+F G S+L + + ++ + + ++ ++ + + LLG Sbjct: 193 TLRTREESIKLTKLRFDTGVASELDYRQAVSLTEAARATLAQQQRQRALDENALVLLLGQ 252 Query: 240 PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + S + +P + G+P+DL+ RPDIR E++L + A IG A++ Sbjct: 253 ALPADVLASLGSSQGLRDTADLPAVPAGLPSDLLTQRPDIRQAEQQLISANANIGAARAA 312 Query: 299 LYPSLSLNGSIALTHDNSFPGY--NTHWSF--GPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P ++L G T N G + W F P LPIFD G+ +N+ A+ + Sbjct: 313 FFPRITLTGQFG-TASNELSGLFKSGSWGFTLAPSALLPIFDAGRNSANLAAAKVEREVA 371 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++ +A +EV +AL S + + + +E + + LS + Y G S LD+ Sbjct: 372 IAQYEKSIQSAFREVSDALDSQGTLRDQIMAQRAQLEAEQARLKLSDLRYSNGVASYLDL 431 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R +E +S+ QL ++LY A+G G+ Sbjct: 432 LDAQRTLFALEQSTVSVRLAQLLNQ-IELYKALGGGWT 468 >gi|320107551|ref|YP_004183141.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319926072|gb|ADV83147.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 484 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 124/475 (26%), Positives = 226/475 (47%), Gaps = 38/475 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGN----SKNLINIDTLKWWESFNDT 59 A+F + + +AGC VGP Y +P MP Q + S + ++ +W F D Sbjct: 17 ALFLVTAIGIAGCKVGPNYKRPVVDMPANYRQAQAPDIAAASNDPASLGDHQWATIFQDP 76 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPN--LKTN 115 L KL++ AL NL + A +R+ A+ + R FPS S+ + IP N Sbjct: 77 ILQKLIQQALTDNLDLHIAAQRVLEAQAQLGMTRPQQFPSVSGSVGYSALQIPQSLAGNN 136 Query: 116 STG------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 S G + W +D +G RR E++ A+L ++ + ++ + Sbjct: 137 SDGTPATSLYRGGGPSASTAWNLDFWGMYRRQSEAARADLLASEWGQRATRTTLVQSVAD 196 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y R + I + +++L+ GA S + + E + + ++++P L Sbjct: 197 AYFQLRSLDAELEITQNTIKARTDSLKLTQALNQHGAGSLADVRQAEELLHAAQANLPEL 256 Query: 223 EKSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQPN-LYIPINIGIPADLIRNRPDI 278 + + + +STLLG+ P L Q QP+ L IP+ G+P+ L+ RPDI Sbjct: 257 RRQIAVEENALSTLLGHNPGPIGRGLPIDQ------QPHPLEIPV--GVPSQLLVRRPDI 308 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 + E +LA + A+IG+A++ +P +SL G + G N +W + PIF Sbjct: 309 QQAEARLAAANARIGVARAQYFPQVSLTGMGGFGSNQLNAILNGSNAYWYAAGSISEPIF 368 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+I++N +++ QE T+++++LNA+++V N+L S E ++ + V+ Sbjct: 369 DAGRIRNNYHLSQAQQQEMLFTYRKSILNALQDVSNSLVSYRETRERRQEQFEQVKSAAD 428 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ + Y G S L++L + ++ L+ +++Q A S V LY A+G G+ Sbjct: 429 AVRLARLRYAGGNTSYLEVLTTDTDLYSAQLLLAQSQQQEANSLVQLYAALGGGW 483 >gi|332002400|gb|AED99289.1| invasion protein [Escherichia coli] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|91209617|ref|YP_539603.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli UTI89] gi|117622795|ref|YP_851708.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli APEC O1] gi|218557512|ref|YP_002390425.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli S88] gi|237707458|ref|ZP_04537939.1| copper/silver efflux system outer membrane protein CusC [Escherichia sp. 3_2_53FAA] gi|91071191|gb|ABE06072.1| probable outer membrane lipoprotein CusC precursor [Escherichia coli UTI89] gi|115511919|gb|ABI99993.1| probable outer membrane lipoprotein CusC precursor [Escherichia coli APEC O1] gi|218364281|emb|CAR01952.1| copper/silver efflux system, outer membrane component [Escherichia coli S88] gi|226898668|gb|EEH84927.1| copper/silver efflux system outer membrane protein CusC [Escherichia sp. 3_2_53FAA] gi|294489518|gb|ADE88274.1| cation efflux system protein CusC [Escherichia coli IHE3034] gi|307627990|gb|ADN72294.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli UM146] gi|323958330|gb|EGB54036.1| NodT family protein efflux transporter [Escherichia coli H263] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|320180103|gb|EFW55044.1| Cation efflux system protein CusC precursor [Shigella boydii ATCC 9905] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------ST 117 + AL N + AT ++ A+ AD +P S + NLK N ST Sbjct: 67 ISEALVNNRDLRMATLKVREAQAQYRLADADRYPQLSGEGSGSWSGNLKGNTATTREFST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRTRALYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|215485614|ref|YP_002328045.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O127:H6 str. E2348/69] gi|218688398|ref|YP_002396610.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli ED1a] gi|312964388|ref|ZP_07778682.1| cation efflux system protein cusC [Escherichia coli 2362-75] gi|215263686|emb|CAS08020.1| copper/silver efflux system, outer membrane component [Escherichia coli O127:H6 str. E2348/69] gi|218425962|emb|CAR06773.1| copper/silver efflux system, outer membrane component [Escherichia coli ED1a] gi|312290865|gb|EFR18741.1| cation efflux system protein cusC [Escherichia coli 2362-75] Length = 460 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|254241628|ref|ZP_04934950.1| hypothetical protein PA2G_02332 [Pseudomonas aeruginosa 2192] gi|126195006|gb|EAZ59069.1| hypothetical protein PA2G_02332 [Pseudomonas aeruginosa 2192] Length = 540 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 208/465 (44%), Gaps = 23/465 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + L + LA C VGP Y P P T Q + S+ + D ++W +D L+ Sbjct: 37 LLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADA-QFWRELDDPVLHS 95 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLD 121 LV+ AL N I A R A R D +P+ AS IS + + + D Sbjct: 96 LVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDASRSD 155 Query: 122 SD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W++D FG+ RR +ES A +++ A + ++ ++++L +Y R Sbjct: 156 RDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYFRLRG 215 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ +A + L+ + F G + + ++ S IP LE + Sbjct: 216 LQVQLQVARDNEINQADTLRLTEVLFENGRGTSFDADRARTQLALTRSRIPPLEAEAAVA 275 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L G + + P L IN G P DL+R RPD+ E++LA + Sbjct: 276 AHRIAVLTGRTPAAMAEVLDHPAA--LPELPAQINAGAPGDLLRRRPDVAAAERRLAAAT 333 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +DL+P +L G I AL + F + + D G+++S I Sbjct: 334 ARIGVAMADLFPRFTLGGLIGTQALGFGSLFERDSETRMISLGVGGSFLDVGRVRSRIAA 393 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A S+ E ++ TVL A++E ENAL ++ + L A E +++ + + + Sbjct: 394 ANSATAENLAVYERTVLRAMEETENALVRLSRAQTENAMLVQATEASRRAAKTARLQFEG 453 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LD+L+ ER+ + E L+ + + A + V +Y + G++ Sbjct: 454 GAIHVLDVLEAERSRLESEDLLAQSATRRATALVAVYKTLAGGWS 498 >gi|258544832|ref|ZP_05705066.1| outer membrane efflux protein OprM [Cardiobacterium hominis ATCC 15826] gi|258519937|gb|EEV88796.1| outer membrane efflux protein OprM [Cardiobacterium hominis ATCC 15826] Length = 492 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/467 (25%), Positives = 220/467 (47%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLNKLV 65 ++LAGC++ P Y +P L + G++ +T W + F D L KL+ Sbjct: 10 LALMLAGCSLAPSYQQPEAALPQNWMEVAIDEQGHASGQTAAET-GWRDYFRDPQLQKLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQL-- 120 + AL N + +A I A+ + D P+ A+ S +R +L ++ Sbjct: 69 EAALAHNHDLKKAALNIEIAQAQYGIQQTDYLPTVAANGSITRNRTARDLTGTGKARVAT 128 Query: 121 -------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +++D +G+ + + + +L + + D A L +IS + +Y AR + Sbjct: 129 VHNLSLASAGFELDFYGRVKSMNDQALNRYLATFEARDAATLGIISAVAKTYYQARIAEA 188 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +A ++L +++ LS L+F G + L ++ +I+S S E++ + ++ Sbjct: 189 QKKLADEVLHSRQESYRLSKLQFDAGLMTGSDLSGVQTQIESARSSSAEAERARQKALNA 248 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +S L+G P ++ +L +P GIPA +++NRPDIR E +L + A I Sbjct: 249 LSLLVGKPVSQLNLPAAGNLKKAFADLRLPG--GIPATVLQNRPDIREAEYQLKAANANI 306 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ LYPS+SL G+I + D N WS P + LPIF++ K+ + AE+ Sbjct: 307 GAARAALYPSISLTGNIGYSSPELDQMIKAPNLGWSIMPSITLPIFNRAKLNRAVDIAEA 366 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH-----KKSMSLSMINY 404 + T+Q TV +A EV +AL + + Q+A ++ + + L + + Sbjct: 367 QQKILIETYQSTVQSAFYEVADALAA-----RQTLAEQYAAQVRGNKAVSERLRLENLRF 421 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L+ LD +R + + L + Q+ + VDLYI +G G N Sbjct: 422 EAGISTALNRLDAQRESYASDQGLLATELQILLNNVDLYITMGGGLN 468 >gi|325498234|gb|EGC96093.1| hypothetical protein ECD227_2331 [Escherichia fergusonii ECD227] Length = 450 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 221/454 (48%), Gaps = 28/454 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 L GC++ PEY +P MP+ P QFS+ + + +D + W F D L L+ AL Sbjct: 5 LTGCSLAPEYQRPAMPV-PQQFSLSQNGLVNAVDNYQNAGWRTFFVDNHLKTLISEALVN 63 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDW 124 N + AT ++ A+ AD +P S + NLK +S TG L++ + Sbjct: 64 NRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRKFSTG-LNARF 122 Query: 125 KIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + L Sbjct: 123 ELDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLR 181 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 182 NYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG---- 237 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ +PS Sbjct: 238 SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPS 297 Query: 303 LSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + ++ Sbjct: 298 ISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYE 357 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD ER Sbjct: 358 QKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAER 417 Query: 420 ---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 AT + +DL+ RQ+ + V LY A+G G+ Sbjct: 418 SLFATRQTLLDLNYG-RQVNE--VSLYTALGGGW 448 >gi|307729765|ref|YP_003906989.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307584300|gb|ADN57698.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 495 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 122/478 (25%), Positives = 209/478 (43%), Gaps = 50/478 (10%) Query: 8 FSLFIVLLAGCTVG--PEYTKPHMPLLPTQFSIGNSKNLINIDT--------------LK 51 F L L AG + P Y +P +P+ P + + ++ L Sbjct: 7 FVLSAALCAGGCISLTPPYVRPALPV-PDSWDAASPPASSAAESSRDAPANATSAPIQLD 65 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIP 110 W F D L L++ AL N + A +R+ A+ RAD P+ AS ++ R Sbjct: 66 WHSYFPDAQLQALIEQALGGNRDLRIAVQRVEQARATYGVRRADTLPTIAASAAYVRLHT 125 Query: 111 NLKTNSTGQLD----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISK 159 G LD S+W++D +G+ R++ +++L ++ A A L VI+ Sbjct: 126 PGVLAPGGSLDAAAYQVGLSESNWELDFWGRVRNLKDAALEQYLASDAARRAATLGVIAN 185 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R ERIS+A + + ++ + +F GA SKL L + E ++ + + Sbjct: 186 VADNYLLLRELDERISVARETIASRSDSLRIFRRRFEVGAISKLDLRQSEILLQQAQVLV 245 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP------NLYIPINIGIPADLIR 273 LE+S H ++ L+G P QP ++Y + G+P+ L+ Sbjct: 246 AQLEQSRATQAHALAVLVGAP------------TRLQPAPLADTSVYANLQPGLPSSLLE 293 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKL 330 RPDI E +L + A IG A++ +P ++L ++ T N F + W F P L Sbjct: 294 RRPDIVAAEHQLRAANANIGAARAAFFPRVTLTSAVGSTSTGLHNLFASGSGAWIFMPNL 353 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD + +SN+ A++ E +++T+ A ++V NAL++ V + Sbjct: 354 SLPIFDANRNRSNLELAKAREGEAVAQYEKTIQEAFRDVANALSAREWLAAQVQTETDTL 413 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L+ + Y G L++LD +R L +R L S V LY A+G Sbjct: 414 AAQTERARLARLRYDNGATPFLEVLDAQRDLLNARQQLIQTRRALLSSRVALYAALGG 471 >gi|78061856|ref|YP_371764.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77969741|gb|ABB11120.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 507 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 221/488 (45%), Gaps = 61/488 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------------KWWE 54 V LA C VGP++ +P +F+ ++ + + D +W Sbjct: 14 VTLAACAVGPDFKRPDT-TTAARFAR-DAHPVASRDAAPPGTTPDTPPDASADADATFWR 71 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP-- 110 F D +L +L+ AL N + A R +A+ + D +P+ AS I H+ + Sbjct: 72 GFGDPALTQLIDTALAANQDLQVAVSRYDASNALLSQATFDRYPTITASGQIGHQLMSKD 131 Query: 111 ----------NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 + T+S G +++ W++DLFG+ RR IES A ++ A V ++ + + Sbjct: 132 QAFGASRSQRDTPTSSIG-INAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAGE 190 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+D R +ER+ IA + D K+ + L + + G S+L + A+ +S S I Sbjct: 191 VASTYVDLRGSQERLRIARENADNQKQTLALINARVGAGRGSELDAARARAQYESTTSRI 250 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHY--MQKQSNNFQ-----PNLYIPINIGIPADLI 272 E + ++ H ++ L G + + K + + P L I+ G P DL+ Sbjct: 251 AVYEAAIGVDEHRLAVLTGQTPDALIGRFDLPKAAASAGTPVPLPALAADIDPGTPGDLL 310 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH------ 323 R RPD+ E +L + A++G+A +DL+P +L+G + T F G +T+ Sbjct: 311 RRRPDVAAAEARLHAATARVGVATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGI 370 Query: 324 -WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 WSF D G++++ I +++ A Q +++TVL A++E ENAL + Sbjct: 371 DWSF--------LDVGRVRARIAASDAEAAGQLAQYRQTVLGALEETENALLRAARTRDE 422 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 L A ++ L+ + G ++LD +R + + + + + A S V L Sbjct: 423 TGHLVQAAADSARAAQLAQARFSAGAIDYYEVLDAQRTLLQAQDAAADGQMRSAASTVAL 482 Query: 443 YIAIGSGY 450 Y A+ G+ Sbjct: 483 YKALAGGW 490 >gi|115351575|ref|YP_773414.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115281563|gb|ABI87080.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 485 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/457 (23%), Positives = 211/457 (46%), Gaps = 28/457 (6%) Query: 17 GCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC++ P Y +P P+ TQ +G + W F D +L + A Sbjct: 24 GCSLAPRYERPAAPVPASYATVDGDTQQGVGPASTADAALLDDWRAYFTDPALQAWIDAA 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQL---- 120 L N + A R++ A+ RADL PS A++ + ++ P ++ ++ L Sbjct: 84 LANNRDLRIAAGRLDEARALYGVQRADLMPSVDANLGYERTRQYDPVVRESAVSGLYRAG 143 Query: 121 --DSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E++ + Sbjct: 144 VGVSAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLHEQLVL 202 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + LD ++ L+ ++ G + + L E + S + L++ +V + L Sbjct: 203 AQRTLDARERIAALTQRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQSVRALQLL 262 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G +F + P+ G P+ L+ RPDIR E +L + A+IG A+ Sbjct: 263 AG----DFARGVPADGTALDTLAIAPVAPGAPSALLERRPDIRQAESRLKAANAQIGAAR 318 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P ++L GS++ F + W+F P++ LPIF G+ ++N+ A + Sbjct: 319 AAFFPRVALTTDYGSVSDAFSTLFAAGTSVWTFAPRITLPIFAGGRNRANLDVASARKHI 378 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TV A +EV +A + + + + Q + L+ Y G + L+ Sbjct: 379 AVAEYEKTVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVATYLE 438 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +R+T + +L K + + LY A+G G+ Sbjct: 439 LLDAQRSTYESGHELIRLKALRLANAIALYRALGGGW 475 >gi|284159952|ref|YP_001058926.2| outer membrane efflux protein OprA [Burkholderia pseudomallei 668] gi|283775080|gb|ABN82707.2| outer membrane efflux protein OprA [Burkholderia pseudomallei 668] Length = 513 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/474 (22%), Positives = 214/474 (45%), Gaps = 43/474 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 34 GCTLAPRYERPAAPVPAHYWSTAAGAPREAGPAAAGGPRAMPDARGGDAGRDARDARLDD 93 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 94 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 153 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 154 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 213 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 214 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 273 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+P+DL+ RPDIR Sbjct: 274 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLPSDLLEQRPDIRQ 329 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 330 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFAGLFSAGSSVWTFAPRLTLPIFAG 389 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + + Sbjct: 390 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGVDAERL 449 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 450 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 503 >gi|220915664|ref|YP_002490968.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter dehalogenans 2CP-1] gi|219953518|gb|ACL63902.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter dehalogenans 2CP-1] Length = 470 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 214/459 (46%), Gaps = 34/459 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 ++GCT+ P Y +P P+ + + L W + F D L ++ AL++N Sbjct: 17 VSGCTLAPRYQRPAAPVAAEFPAGAGAATGPAASDLGWRDVFQDPGLQAVIDQALRENRD 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------------TNSTGQLDS 122 + A + A+ R+ L P+ A+ S K T S G + Sbjct: 77 LRVAALNVELARAQYGIQRSYLLPTVGATGSGSRARTAKDLSFTGEPSVGNTFSAGVGLT 136 Query: 123 DWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 ++IDLFG+ R + + +L S A L ++S++ Y+ +R + ++++A Q L Sbjct: 137 SFEIDLFGRVRSLRNQALEQYLSTEEAHRSAHLALVSEVAVQYLASRALQSQVALAEQTL 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 +++ +L+ F G TS+L EA++++ ++ ++ + + L G P Sbjct: 197 QTVQQSYDLAKRTFEAGRTSELDFRTAEAQVETARVNLSAYQQQLAQAENALVLLAGGPL 256 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L +S P +P G+P+DL++ RPDI E +L + A IG A++ +P Sbjct: 257 PKDLPTAPLESQP--PVAELPA--GLPSDLLQRRPDILSAEHQLKAANASIGAARAAFFP 312 Query: 302 SLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S+SL S+ N F + W+F P++ LPIF G+ K+N+ A Q + ++ Sbjct: 313 SISLTASVGTASTELSNLFTAGSGTWAFSPRIDLPIFTGGRNKANLDAANVRKQIEIASY 372 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ + A +EV +AL + + + V+ ++ +S + YR+G S L++L + Sbjct: 373 EKAIQVAFREVADALVARGRLDEQLEAQTRRVQAEQRRYDISELRYRKGVDSYLNVLTAQ 432 Query: 419 RATAKVEVDLSIAKRQLAKSY-------VDLYIAIGSGY 450 R DL A++QL ++ + LY A+G G+ Sbjct: 433 R-------DLYGAQQQLIQTRLTRFSNSIGLYRALGGGW 464 >gi|187478149|ref|YP_786173.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] gi|115422735|emb|CAJ49263.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] Length = 487 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/470 (25%), Positives = 229/470 (48%), Gaps = 43/470 (9%) Query: 15 LAGCTVGPEYTKPHMPL---LPT----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LAGC++ P+Y +P P+ PT + + L D + W + F D+ L ++ + Sbjct: 18 LAGCSLAPKYERPDAPVSASYPTGPAYAATQAGAGELAAAD-VGWRDFFQDSLLQWILTL 76 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD--- 121 L+ N + A + AA+ RADL P+ A+ + R +L N + Q+ Sbjct: 77 TLENNRDLRVAALNVEAARAQYRIERADLLPTVGAAGTANVQRTPASLTQNGSLQISRQY 136 Query: 122 ------SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S W++DLFG+ + +++ LA ++ A +L +I++ +Y+ Sbjct: 137 RVGAAVSSWELDLFGRIQSLTEQALQTYLAQDETRQA----TQLTLIAETANAYLILCAD 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + + Q L + + +L+ F QG ++L L + E +++ E + + + Sbjct: 193 QELLQLTEQTLASQRASYDLTKQSFDQGVATELDLSQAEVSLRTAERNRAQYLRQVARDR 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + ++ L+G P L Q + P+ + N+ G+PADL+ RPDIR E +L + Sbjct: 253 NALTLLVGQPLPADL-ITQLDAIKQLPDDVVIANLPAGLPADLLARRPDIRAAEHQLQGA 311 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P++SL GS + + F + WSF P++ +PIF G + +N+ Sbjct: 312 NANIGAARAAFFPTISLTGSAGVASGSLGSLFDAGSGAWSFAPQITMPIFAGGALLANLD 371 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + +++ + +EV + L D++I+ + Q VE ++++ +LS + Sbjct: 372 LAQVRKRIGIANYEKAIQIGFREVADGLAGRATLDQQILAQRQL-VEANQRAYTLSDQRF 430 Query: 405 RQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 RQG S L +LD +R ++ + VD +A+ + +DLY A+G G+ Sbjct: 431 RQGVDSYLSVLDSQRSLYSSQQALVDTRLAR---LANLIDLYKALGGGWT 477 >gi|150008126|ref|YP_001302869.1| outer membrane protein oprM [Parabacteroides distasonis ATCC 8503] gi|149936550|gb|ABR43247.1| outer membrane protein oprM precursor [Parabacteroides distasonis ATCC 8503] Length = 450 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 225/455 (49%), Gaps = 15/455 (3%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N A F + ++ + C +G Y +P + L + ++ + +++ + W + D +L Sbjct: 5 NFYIAAFVVSMLAFSSCKIGKRYVRPELNLPDRIEAYTDTTDTASVENIPWESLYADEAL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNST 117 L++ AL N + A +RI+ A + V A+++ +Y + + P Sbjct: 65 KDLIRKALDNNKDMKIAAKRISFAS-MLPEVGANVYAQKERLNYGGDNPKPDPEF----G 119 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 +L W++DL+G R E+++A+ +L +I+++ +Y + +SI Sbjct: 120 AKLTLSWELDLWGNLRWANEAAIASYMETVEGQRALRLTIIAEVAANYYQLCALDQELSI 179 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ ++ ++S L Sbjct: 180 VQQTLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQIKIKESDLSML 239 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG E+ + + + +L + IG+P+ L+ RPD+R E KL + A++G+A+ Sbjct: 240 LG----EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLRAANAQVGVAQ 295 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +DL+P + L + D + F L PIF GK K+ ++ A++ +++ Sbjct: 296 TDLFPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVKAAKARYEQEV 355 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++++VL A KEV NA+ ++ + K+I + K + L+ + Y G S +D+L Sbjct: 356 YSYEKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYINGVISYMDVL 415 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D +R ++ L+ A S V LY A+G G+ Sbjct: 416 DAQRGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 450 >gi|86156944|ref|YP_463729.1| RND efflux system, outer membrane lipoprotein, NodT [Anaeromyxobacter dehalogenans 2CP-C] gi|85773455|gb|ABC80292.1| RND efflux system, outer membrane lipoprotein, NodT [Anaeromyxobacter dehalogenans 2CP-C] Length = 500 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 115/459 (25%), Positives = 216/459 (47%), Gaps = 34/459 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 ++GCT+ P Y +P P+ + G + L W + F D L ++ AL++N Sbjct: 17 VSGCTLAPRYQRPAAPVAAEFPAGGGAPTGPAAADLGWRDVFQDPGLQAVIDQALRENRD 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN---------STGQLDS 122 + A + A+ R+ L P+ A+ S R +L S G + Sbjct: 77 LRVAALNVELARAQYGIQRSYLLPTVGATGSGSRSRTAKDLSFTGEPSVGNVFSAGVGLT 136 Query: 123 DWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 ++IDLFG+ R + + +L S A L ++S++ Y+ +R + ++++A Q L Sbjct: 137 SFEIDLFGRVRSLRNQALEQYLSTEEAHRSAHLALVSEVAVQYLASRALQSQVALAEQTL 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 +++ +L+ F G TS+L EA++++ ++ +++ + + L G P Sbjct: 197 QTVQQSYDLAKRTFEAGRTSELDFRTAEAQVETARVNLSAYQQALAQAENALVLLAGGPL 256 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L +S P +P G+P+DL++ RPDI E +L + A IG A++ +P Sbjct: 257 PKDLPTAPLESQP--PVAELPA--GLPSDLLQRRPDILSAEHQLKAANASIGAARAAFFP 312 Query: 302 SLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S+SL S+ N F + W+F P++ LPIF G+ K+N+ A Q ++ Sbjct: 313 SISLTASVGTASTELSNLFTAGSGTWAFSPRIDLPIFTGGRNKANLDAANVRKSIQIASY 372 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ + A +EV +AL + + + V+ ++ +S + YR+G S L++L + Sbjct: 373 EKAIQVAFREVADALVARGRLDEQLEAQTRRVQAEQRRYDISELRYRKGVDSYLNVLTAQ 432 Query: 419 RATAKVEVDLSIAKRQLAKSY-------VDLYIAIGSGY 450 R DL A++QL ++ + LY A+G G+ Sbjct: 433 R-------DLYGAQQQLIQTRLARYQNSIGLYRALGGGW 464 >gi|186472219|ref|YP_001859561.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194551|gb|ACC72515.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 494 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 224/481 (46%), Gaps = 44/481 (9%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSL 61 +L + + VLLAGCTVGP+Y + F + + WW + D L Sbjct: 20 MLAPVPAAVTVLLAGCTVGPDYKGAPATTHVSSFKRAPDGVVQTAPGVAAWWLALGDPQL 79 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---- 117 L+ + + + A R+ A+ + +++ P AS ++ L+T Sbjct: 80 TALIDAGIANSPDLRAAQARVRQARAGLSQQQSNELPKVGASAAY-----LRTREPDLSS 134 Query: 118 ------------------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 D+ W++DLFG RR +E++ A D++ A++ A + + + Sbjct: 135 LSGGSSSSGGRGPIALYLAGFDASWELDLFGGTRRAVEAASAQADASQAELADAHVQLAA 194 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ R ++ ++I + +L + + L+ + +G S+L + ++ ++++ + Sbjct: 195 EIGSAYVGLRDQQQSMAIVRKSAELEARVLTLTEQRRDRGVASQLDVERVRTQVENTRNA 254 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 + L+ ++ ++ L G P + + N P +P I +G PA L+R R Sbjct: 255 LIPLDAQIAESLDELAVLTGREPGA-----LDDELNASAPLPALPQTIAVGDPAQLLRRR 309 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKL 330 PD+R E++LA A+IG ++D +P ++L GS+A + + PG+ N W P L Sbjct: 310 PDVRAAERRLASQSAQIGEREADWFPKVTLFGSLAFSAAD--PGHLVRKNNFTWLAVPYL 367 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 FD G+ K+ + ++ ++ E ++ TVL A+++ + AL+ +++ V L+ Sbjct: 368 QWNAFDFGRTKARVDQSRAALDEAQAKYESTVLGALRDADVALSRYGHERENVVSLRTVE 427 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ +L+ YR G + LD LD ER E + + QL K YV L ++G G+ Sbjct: 428 SSATRAATLTEQRYRAGTATALDWLDAERTRYTAEQNRIQSDAQLIKDYVALQKSLGLGW 487 Query: 451 N 451 Sbjct: 488 E 488 >gi|218698944|ref|YP_002406573.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli IAI39] gi|218368930|emb|CAR16684.1| copper/silver efflux system, outer membrane component [Escherichia coli IAI39] Length = 460 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQTLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYAALGGGW 458 >gi|323976448|gb|EGB71538.1| NodT family protein efflux transporter [Escherichia coli TW10509] Length = 462 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 124/460 (26%), Positives = 224/460 (48%), Gaps = 30/460 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLV 65 F V LA GC++ P+Y +P MP+ P QFS+ + + +D + W F D + L+ Sbjct: 11 FCVALALTGCSLAPDYQRPAMPV-PQQFSLSQNGLVNAVDNYQNAGWRTFFVDNQVKTLI 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TG 118 AL N + AT ++ A+ AD +P S + NLK +S TG Sbjct: 70 SEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG 129 Query: 119 QLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ I Sbjct: 130 -LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQI 187 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L Y+++ + G+++ L+L + I+S SDI + + + L Sbjct: 188 AEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLL 247 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + Q Q+ N + + G+ + ++ RPDI E L + A IG A+ Sbjct: 248 LG----NYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAAR 303 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ Sbjct: 304 AAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIQIPIFNAGRNQANLDIAEIRQQQ 363 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L+ Sbjct: 364 SVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLE 423 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 424 VLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 460 >gi|103486935|ref|YP_616496.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingopyxis alaskensis RB2256] gi|98977012|gb|ABF53163.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingopyxis alaskensis RB2256] Length = 471 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 211/464 (45%), Gaps = 24/464 (5%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTS 60 +AI L LAGC + P + +P + P +F+ G + D + W + F D Sbjct: 3 KAILLLIATTLAGCVDMAPPHERPPLATAADYPAEFAGGATPGQRATD-IAWRDFFADPR 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-----FIPNLKTN 115 L L+ A+ N + A +I A+ AD P+ AS + + T+ Sbjct: 62 LEMLIAQAIAHNRDLAVAVAQIEEARGLYRIQAADRLPTVGASADAARTRGPSVTGVGTD 121 Query: 116 STGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +T + + +++D +G+ R++ E++ + + A +L ++ + +Y +R Sbjct: 122 TTSRYSVGVGVTSFELDFWGRVRNLSEAARSQYLATEAAERTFRLALVRDVASTYFASRG 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E+I +A + K+ + ++ + G TS L + E + E+ + +L+ Sbjct: 182 AEEQIQLAEATVASRKEGLRIARRRLDAGVTSALDYRQSETLLTQAETQLASLKLGKAQA 241 Query: 230 VHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ L G P +E L + + P L G+P+DL+ RPDI E++L + Sbjct: 242 DNFLAVLTGGPVSEPLLAPLPLVAQAGAPAL----TAGLPSDLLVARPDIVATEERLRAA 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +G A++ +PS+SL GS D+ F W+FGP + LPIFD G+ + N+ Sbjct: 298 RANVGAARAAFFPSISLTGSFGFASGALDDLFGDDGMTWTFGPSISLPIFDFGRRQGNLT 357 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE+ ++ TV A +EV +AL + V + ++ L+ YR Sbjct: 358 VAEAREDIAVAAYERTVQGAFREVADALAGRRYLAEQVEAQERGTLATRQIADLARKRYR 417 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +G + L++LD ER E L +R + V LY+A+G G Sbjct: 418 EGVSTYLEVLDAERNLFAAEQTLIELRRAQVDNLVTLYVALGGG 461 >gi|226951713|ref|ZP_03822177.1| outer membrane efflux protein [Acinetobacter sp. ATCC 27244] gi|226837503|gb|EEH69886.1| outer membrane efflux protein [Acinetobacter sp. ATCC 27244] Length = 493 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 21/459 (4%) Query: 13 VLLAGCTVGPEYTKPHMPL---LPTQ-----FSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +LAGC++ P Y +P P+ PT + N K + D + W + + D L +L Sbjct: 24 TILAGCSMAPIYERPVSPVSEHYPTGEAYPGLQVNNGKQTVAAD-IGWRDFYTDPVLLQL 82 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTN----ST 117 + AL+ N + A + RAD P + S S R +L N Sbjct: 83 IDHALKNNHDFKVTALNVEAIEAQYRIRRADRLPHVGVTAESASQRLPSDLAYNPRMYQV 142 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G W++DL+G+ R + + +L N ++ ++L+++S + +Y+ + +E + + Sbjct: 143 GVTSVAWEVDLWGRVRSLSDQALQNYLASKEVQTASQLSLVSAVANAYLVYKADQETLGL 202 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L +K+ +L+ G ++ L + E +++ +++ + + + + L Sbjct: 203 TKATLATQQKSYDLTRKLVDVGNATRFDLRQAEIGLRTAQTNYAKFLRITAQDRNALVLL 262 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LG P T+ L QS + + I +G+P+DL++ RPDIR E KL + A IG A Sbjct: 263 LGSPLTQELAAQLDQSPKIPDQVVMQDIPVGLPSDLLQRRPDIRAAEHKLQAANANIGAA 322 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS++L GS DN F WSF PK+ LPIF+ G ++N+ R+ Q Sbjct: 323 RAAFFPSITLTGSAGTASSSLDNLFNAGTGAWSFMPKINLPIFNAGLNQANLDRSHIMKQ 382 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + I + +++ A +EV + L + + + Q + + + L+ + + G + L Sbjct: 383 IEVINYDKSIQTAFREVADGLAGKSTLDEQIKSQQQMIAASQDAHKLATLRFDAGEDNYL 442 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R + L + + + V+LY A+G G+N Sbjct: 443 AVLDSQRTLYASQQALIQTRLERLNNQVNLYKALGGGWN 481 >gi|24111909|ref|NP_706419.1| copper/silver efflux system outer membrane protein CusC [Shigella flexneri 2a str. 301] gi|24050712|gb|AAN42126.1| putative resistance protein [Shigella flexneri 2a str. 301] Length = 460 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 128/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPVMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L S A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMASNANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + Y LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNEIY--LYTALGGGW 458 >gi|30248194|ref|NP_840264.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30180079|emb|CAD84081.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 516 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 128/455 (28%), Positives = 212/455 (46%), Gaps = 36/455 (7%) Query: 18 CTVGPEYTKPHMP------LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 C +GP+Y++P + L PT+ G S I L WWE D L L+ ALQ+ Sbjct: 57 CAMGPDYSRPQVDVAQNYRLTPTE---GRS-----IANLPWWELLKDKKLQLLIDQALQE 108 Query: 72 NLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKT--NSTGQLD 121 N + Q T + + + D P + ++ P T N GQ Sbjct: 109 NKDLKQTTASVEELQARLRISNMDFIPDVNIEGNAPALGTMGGFSRPGFPTPYNYFGQTI 168 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +W++D++G+ RR E++ A+L + L ++S + SY D F ++ IAH Sbjct: 169 LNWELDIWGRLRRANEAARADLLAQEENRRAVVLTLVSSVAQSYFDLLQFDMQLDIAHHA 228 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + ++I +S + G S+L L + EAE + + LE+ + +S L G Sbjct: 229 LSSWDESIAISRAQLQGGLISRLDLDQFEAERARAAAQVAELERQIIQKENELSVLTGKN 288 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 T L +KQS N Q IP I G+P++L++ RPDI E+ L + A+IG AK+ Sbjct: 289 PTSVL---RKQSLNEQ---LIPPEIPAGLPSELLQRRPDILQAEQTLKAATARIGAAKAA 342 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPK---LYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL G + L+ ++ FG L P+ + + R AE+ A++ Sbjct: 343 RFPRISLTGFLGLSSPALSGLLDSGSEFGVGGFGLAAPLLNSQSLGFEQRAAEAKARQAL 402 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++T+L A KEVE++L +I + Q VE ++ + + Y+ G S +D+L Sbjct: 403 AKYEQTILVAFKEVEDSLAAIRTANEQYKAQQAQVEALASALQTAELRYQGGITSYVDVL 462 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R E L+ +R S V LY A+G G+ Sbjct: 463 LAKRTLFDAESALTATRRLHLISIVQLYKALGGGW 497 >gi|172065564|ref|YP_001816276.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997806|gb|ACB68723.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 486 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 32/430 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P +F ++ + D WW F D L + V +AL QN Sbjct: 18 GCAVGPDYARPEVAM-PQRFQGQAAVDQRHAAADADLATWWTGFGDPRLTRYVTLALAQN 76 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T NS D Sbjct: 77 LDLAQAAARVAQARAAVGAANAALLPSGEVSGQAARVYQSVETPLGRVLNSAPGFDRHGS 136 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 137 DYEADFNASWELDVFGGLRRGREAALADYQASEAGAVATRLAVAAQTADIYITIRGLQGR 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + L + +G ++L + + E + + + +P LE + ++ + Sbjct: 197 LKVARHQVQTEEDLLSTISLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDTAMNAL 256 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A + A+I Sbjct: 257 DVMLGSQPGTHRAELLDGGDVPVAPRI---AATGTPGELLRRRPDLIVAERRVAAANARI 313 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL+G I + N F G + L +FD G+I + I +A+ Sbjct: 314 GVAIAEYYPKFSLSGLIGSATTMGAGNLFTGGANQAAGVLGLRWRLFDFGRINAQIAQAK 373 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 374 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAVLGGGVDSLGRARAASFAAYQKGV 433 Query: 409 YSLLDILDIE 418 SL+++L + Sbjct: 434 VSLIEVLQAD 443 >gi|16128555|ref|NP_415104.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. MG1655] gi|89107437|ref|AP_001217.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. W3110] gi|170080151|ref|YP_001729471.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. DH10B] gi|170080252|ref|YP_001729572.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. DH10B] gi|238899849|ref|YP_002925645.1| copper/silver efflux system, outer membrane component [Escherichia coli BW2952] gi|2495560|sp|P77211|CUSC_ECOLI RecName: Full=Cation efflux system protein CusC; Flags: Precursor gi|1778487|gb|AAB40770.1| outer membrane protein OprK homolog [Escherichia coli] gi|1786785|gb|AAC73673.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. MG1655] gi|4062196|dbj|BAA35206.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K12 substr. W3110] gi|169887986|gb|ACB01693.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. DH10B] gi|169888087|gb|ACB01794.1| copper/silver efflux system, outer membrane component [Escherichia coli str. K-12 substr. DH10B] gi|238860611|gb|ACR62609.1| copper/silver efflux system, outer membrane component [Escherichia coli BW2952] gi|260450263|gb|ACX40685.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli DH1] gi|309700809|emb|CBJ00106.1| cation efflux system protein [Escherichia coli ETEC H10407] gi|315135237|dbj|BAJ42396.1| copper/silver efflux system outer membraneprotein CusC [Escherichia coli DH1] gi|323938429|gb|EGB34682.1| NodT family protein efflux transporter [Escherichia coli E1520] Length = 457 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|295681061|ref|YP_003609635.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295440956|gb|ADG20124.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 500 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 121/468 (25%), Positives = 216/468 (46%), Gaps = 43/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC+ + KP P Q+S G + + D WW +ND +LNKL+++AL N Sbjct: 19 GCSGSLQLEKPAA--FPPQYSEAQQGAATPMSAQDLAAWWTQYNDPTLNKLIEVALAHNF 76 Query: 74 TILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLK-------TNSTGQ--- 119 I A R++ + I R+ L PS AS+S H L+ TN+ Q Sbjct: 77 DIATAYARVDQVQAGIRLARSQLLPSVGASVSGAKFHGGETQLEFAQFLGITNTDAQFWR 136 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W+IDLFGQ R + ++ + +A +L+V+S + Y+ R + +I Sbjct: 137 VGLQAQWEIDLFGQGRSRLSAAREQVRAAAGDAQAVRLSVVSGVANLYVTYRGLLRQRTI 196 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q + ++++ FT G + A +++ + LE N+ L Sbjct: 197 LLQSRAIADDFVDIAEKSFTAGLVMSTDIEAARAGRAQVDARMQDLENGIAQARLNLQNL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G +F + +S+ L P I G P DL+ RPD+ + ++ +V + +A Sbjct: 257 CGVQPADFAGVL-DESDTLMTAL--PHIEPGQPVDLLMRRPDLIAAQARVNAAVRQSDVA 313 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + + +P++SL+G +A + F G N T W FG + +P+ D G +S + +++ A Sbjct: 314 RLNYWPTISLSGMLA-RNGWEFAGQNLGASTFWLFGAAMAMPLIDFGARRSQVESSDAQA 372 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ +++T L A +V+ AL +N ++ E+ +++ LS + RY L Sbjct: 373 QQAMFNYEKTALGAFYDVDRALARLNRQDELFKARNE--EVTRRAAQLSQVRR---RYEL 427 Query: 412 LDI--LDIERA-TAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY--NP 452 D +DI++ A +E S A+ ++ K + L+ A+G G+ NP Sbjct: 428 GDTGRVDIDQVRVALLESQSSQAREEVGKLQAQFALFRAMGGGWLANP 475 >gi|78062045|ref|YP_371953.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77969930|gb|ABB11309.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 482 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 117/469 (24%), Positives = 235/469 (50%), Gaps = 25/469 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFND 58 M IL+ +L+A CT+ P Y +P P + Q++ N + + W + + D Sbjct: 1 MKILKLAVLPAALLMASCTMIPTYHRPD-PSVAAQYATAAQDNAGQPSAAEVGWRDFYTD 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS 116 L L+ +AL+ N + A I AA+ RADL P S+ AS S + +P+ ++ Sbjct: 60 PHLQTLIGMALENNRDLRVAVLNIEAARAQYRIQRADLLPTLSAGASGSIQRLPS-DLST 118 Query: 117 TGQLD----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 TGQ + +++DLFG+ R + E ++ + A ++++I+++ +++ Sbjct: 119 TGQAGVTRSYNVGGVASYELDLFGKIRSLTEQAMQTYLATEATRKATQISLIAEVATAWL 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++ + L + +++++ + G +S L L + E +++ E ++ ++ Sbjct: 179 TLQADQDIKVLTADTLASQRASLKITEAGYRNGTSSLLDLRQAETTVRAAEVNLAQYDRQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R +++ ++ L+G P + L + ++S + + +P G+P+DL+ RPDI E + Sbjct: 239 VRTDINALTLLVGVPLDDAL--LSRESLATVRLDEDLPA--GLPSDLLARRPDIIAAEHQ 294 Query: 285 LADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L S A IG A++ +PS+SL G+ + + N F + WSFGP + +PIFD G+ Sbjct: 295 LMASNANIGAARAAFFPSISLTANGGTASASLRNLFDPGSAAWSFGPTISVPIFDYGRNS 354 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ ++ + + T+Q+ V A +EV +AL + T + V+ + + LS Sbjct: 355 ANLAVSKVNRDIEVATYQKAVQTAFREVSDALDGRATWGQQETAQRLLVDASQSAYRLSD 414 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR+G +++L +R+ + +L + + VDLY A+G G+ Sbjct: 415 VRYREGVDGYVNVLVNQRSLYDAQQNLVKVRLARMSNTVDLYRALGGGW 463 >gi|170751619|ref|YP_001757879.1| RND efflux system outer membrane lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170658141|gb|ACB27196.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium radiotolerans JCM 2831] Length = 537 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 130/497 (26%), Positives = 234/497 (47%), Gaps = 54/497 (10%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLI--NIDT---LKWW 53 RA+ + ++ LAGCTVGP++ PL L T + L+ ID + WW Sbjct: 12 RAMITAGLLGLAGCTVGPDFAPLATPLADAGDYLDTGLVAPTPRRLLARTIDAEPDVAWW 71 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP 110 +F D L +L QNL + T R+ ++ I + A P+ ++ +F Sbjct: 72 LAFRDPVLAQLEDRLAAQNLDVQTTTARLFQSRSQINTAAAAGLPTLNGQGSAYRQQFSK 131 Query: 111 N--------------------LKTNSTGQL-----------DSDWKIDLFGQ-RRHIESS 138 N N T L D+ W++DL+G+ RR +ES+ Sbjct: 132 NGTIGLLSNSLGSLTGGSSGASSGNLTAPLTNGFESYTLGFDASWELDLWGKVRRSVESA 191 Query: 139 LANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 A D SA A+ D A ++ ++L +Y+ R +E I I + + ++ +++ ++ + Sbjct: 192 EAQADASAEARRD-ALISGQAELARAYVQLRGTQELIRIDLANIRVNEQILDVVRVRQQK 250 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G + L ++++I++ +P L++ ++ IS LLG P + + P Sbjct: 251 GLVTGLDTSSAAQQVEAIKAQLPQLQQQEIQQINAISLLLGEPPLALSQELV--AGPSIP 308 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS- 316 + I IG+P+ L+ RPDIR E L +VA+IG+A++ +PS++L GS + + Sbjct: 309 PVPPRIPIGVPSSLVMRRPDIRRAEANLHSAVAEIGVAEAQFFPSVTLTGSPTVNSVDPG 368 Query: 317 --FPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 F G + + + GP + +P+F+ G++KSN+ + QE I +Q+ VL +V NAL Sbjct: 369 KLFRGSSLQYMNIGPSISIPLFEGGRLKSNLVLQRARQQEAAIAYQKAVLQGWHDVVNAL 428 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ D+ +L V +++++LS Y QG +L + + E LS A Sbjct: 429 AALRGDEARRARLARQVADARQALALSRARYVQGVEIFTTVLQASQTVLQAETSLSQATA 488 Query: 434 QLAKSYVDLYIAIGSGY 450 ++ +V L A+G G+ Sbjct: 489 AISTDFVALSKALGGGW 505 >gi|332341912|gb|AEE55246.1| cation efflux system protein CusC [Escherichia coli UMNK88] Length = 457 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQRVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|307730861|ref|YP_003908085.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307585396|gb|ADN58794.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 518 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 119/470 (25%), Positives = 215/470 (45%), Gaps = 37/470 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN-----------------SKNLINIDTLKWWES 55 + AGCT+ P+Y +P P+ T F G S N + W + Sbjct: 22 LFAAGCTMAPKYERPAAPVSST-FPTGGVYATQPGATQPGGAGARSANGQAAADIGWRDF 80 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP--- 110 F D + +L++IAL+ N + + + A++ VRA L P+ + AS S P Sbjct: 81 FVDPRMQRLIEIALKNNRDLRVSVLNMQASQAQFRIVRAGLLPTLDAAASQSKSRTPKDL 140 Query: 111 ----NLKTNS-TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N +NS + L++ W+ID FG+ + + + +LA + A++ ++S++ Y Sbjct: 141 SVFGNTISNSYSVGLNASWEIDFFGRIQSLKDQALAQYLATAQARKAAEIALVSQVANQY 200 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + L +++ ++ L+F G S+L L + + ++ +++ + + Sbjct: 201 LTVLELDDLLKVTQNTLKTAEESYRITKLQFDNGTGSELDLRQAQTVVEQAGANLQS-QA 259 Query: 225 SFRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 R N + LLG P L S+ NL I G+P+DL+ RPDI E+ Sbjct: 260 RLRAQAENALVLLLGEPLPADLPPGLTLSDQ---NLLTDIPAGLPSDLLTRRPDIMEAEE 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +P +SL GS T F + WSF P + LPIF+ G+ Sbjct: 317 NLLAANANIGAARAAFFPKVSLTGSFGTLSPTLGGLFKPGSAAWSFAPSITLPIFEGGQN 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+N+ A Q T+++ + A +EV +AL + + + L+ ++ + LS Sbjct: 377 KANLDLANIQKNAQIATYEKAIQTAFREVADALAARGTYDQQIQSLERNTFAQQRRLDLS 436 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G S L +L + + L A+ + ++ V LY A+G G+ Sbjct: 437 NLRYTNGVDSYLSVLTAQTDLYSSQQSLITARMERLQNLVTLYQALGGGW 486 >gi|298376448|ref|ZP_06986403.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] gi|298266326|gb|EFI07984.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] Length = 459 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 115/465 (24%), Positives = 226/465 (48%), Gaps = 26/465 (5%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N A F + ++ + C +G Y +P + L + ++ + +++ + W + D +L Sbjct: 5 NFYIAAFVVSMLAFSSCKIGKRYVRPELNLPDRIEAYTDTTDTASVENIPWESLYADEAL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASISHRFIPNLKTNSTG 118 L++ AL N + A ++ KE I + R A + P A+I + + N G Sbjct: 65 KDLIRKALDNNKDMKIAAAKV---KEMIAAKRISFASMLPEVGANI---YAQKERLNYGG 118 Query: 119 -----------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +L W++DL+G R E+++A+ +L +I+++ +Y Sbjct: 119 DNPKPDPEFGAKLTLSWELDLWGNLRWANEAAIASYMETVEGQRALRLTIIAEVAANYYQ 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +SI Q LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ Sbjct: 179 LCALDQELSIVQQTLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQI 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ ++S LLG E+ + + + +L + IG+P+ L+ RPD+R E KL Sbjct: 239 KIKESDLSMLLG----EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLR 294 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIR 345 + A++G+A++DL+P + L + D + F L PIF GK K+ ++ Sbjct: 295 AANAQVGVAQTDLFPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVK 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ +++ +++++VL A KEV NA+ ++ + K+I + K + L+ + Y Sbjct: 355 AAKARYEQEVYSYEKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYI 414 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 415 NGVISYMDVLDAQRGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 459 >gi|197118903|ref|YP_002139330.1| RND family efflux pump outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197088263|gb|ACH39534.1| efflux pump, RND family, outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 504 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 242/470 (51%), Gaps = 37/470 (7%) Query: 10 LFIVLLAGCTVGPEYTKP-HMP---LLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNK 63 L + L C VGP++ +P P L+ T G ++ ++T WW FND L++ Sbjct: 32 LSLAFLGACAVGPDFKRPVSTPPAHLMETTGETGRQSQVVTGKMET-AWWTLFNDEILSE 90 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL--- 120 L + A + N + A R+ ++ + P + SI + ++ GQ+ Sbjct: 91 LQERAQRGNFDLQLAAARLAQSRAQTGIANSAGLP--HLSIGGSYA-RAADSANGQMALL 147 Query: 121 --------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 ++ W+ID++G RR ES+ A+L ++ Q + ++++ +++ +YI Sbjct: 148 GAPDTPYDIMQAGFNASWEIDMWGHARRTSESAAASLQASAFQREGVRVSLAAEVARTYI 207 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 RH + ++ I Q L + + ++L+ + G ++ A++ S ++ IP LE+ Sbjct: 208 QLRHVQTQLDITRQNLAIAENALKLADSRVKNGIATRFESAASSAQLASTKALIPRLEEQ 267 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEK 283 ++ ++ LLG P L M ++ P +P + IG+ ++L R RPDI E Sbjct: 268 RDALMNALALLLGEP-PRTLDAMLTPTHQIPP---VPSEVPIGLSSELARRRPDILQAEA 323 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTH-WSFGPKLYLPIFDKGKI 340 +L + A IG AK+D YP +SLNGS+ N +F + + ++ GP LYLPIF+ G++ Sbjct: 324 RLHAATAAIGAAKADFYPRISLNGSLGFQSLNLDTFGNWASRTFAVGPTLYLPIFEGGRL 383 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + +E+ QE I +Q+TVL+A EV++AL+S +E ++ +L A ++++ ++ Sbjct: 384 RGTLALSEARQQEAVIAYQKTVLHAWHEVDDALSSYSEVQRRGEQLALAFGQYRQAYQVA 443 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y QG L +L +R+ +++L+ +++ + V+LY A+G G+ Sbjct: 444 LRRYEQGAAEYLMVLTAQRSLLASQMELADNTSRVSLAMVNLYKALGGGW 493 >gi|323184944|gb|EFZ70312.1| cation efflux system protein cusC [Escherichia coli 1357] Length = 450 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/456 (27%), Positives = 221/456 (48%), Gaps = 32/456 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 448 >gi|306812996|ref|ZP_07447189.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli NC101] gi|305853759|gb|EFM54198.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli NC101] Length = 460 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRELS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSVISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQTNLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|68500017|gb|AAY97960.1| MDE outer membrane protein [Plasmid pMCBF1] gi|133711777|gb|ABO36597.1| MDE outer membrane protein [uncultured bacterium pMCBF6] Length = 540 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 207/465 (44%), Gaps = 23/465 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + L + LA C VGP Y P P T Q + S+ + D ++W +D L+ Sbjct: 37 LLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADA-QFWRELDDPVLHS 95 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLD 121 LV+ AL N I A R A R D +P+ AS IS + + + D Sbjct: 96 LVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDASRSD 155 Query: 122 SD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W++D FG+ RR +ES A +++ A + ++ ++++L +Y R Sbjct: 156 RDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYFRLRG 215 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ +A + L + F G + + ++ S IP LE + Sbjct: 216 LQVQLQVARDNEINQADTLRLIEVLFENGRGTSFDADRARTQLALTRSRIPPLEAEAAVA 275 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L G + + P L IN G P DL+R RPD+ E++LA + Sbjct: 276 AHRIAVLTGRTPAAMAEVLDHPAA--LPELPAQINAGAPGDLLRRRPDVAAAERRLAAAT 333 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +DL+P +L G I AL + F + + D G+++S I Sbjct: 334 ARIGVAMADLFPRFTLGGLIGTQALGFGSLFERDSETRMISLGVGGSFLDVGRVRSRIAA 393 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A S+ E ++ TVL A++E ENAL ++ + L A E +++ + + + Sbjct: 394 ANSATAENLAVYERTVLRAMEETENALVRLSRAQTEYAMLVQATEASRRAAKTARLQFEG 453 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LD+L+ ER+ + E L+ + + A + V +Y + G++ Sbjct: 454 GAIHVLDVLEAERSRLESEDLLAQSATRRATALVAVYKTLAGGWS 498 >gi|331656597|ref|ZP_08357559.1| cation efflux system protein CusC [Escherichia coli TA206] gi|222032332|emb|CAP75071.1| Cation efflux system protein cusC [Escherichia coli LF82] gi|312945117|gb|ADR25944.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli O83:H1 str. NRG 857C] gi|331054845|gb|EGI26854.1| cation efflux system protein CusC [Escherichia coli TA206] Length = 460 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 32/456 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 15 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEAL 71 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDS 122 N + A ++ A+ AD +P S + NLK +S TG L++ Sbjct: 72 VNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNA 130 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 131 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 189 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 190 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 247 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+P+ ++ RPDI E L + A IG A++ + Sbjct: 248 --SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFF 305 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 306 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 365 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 366 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVLDA 425 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 426 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|114332123|ref|YP_748345.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Nitrosomonas eutropha C91] gi|114309137|gb|ABI60380.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Nitrosomonas eutropha C91] Length = 464 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 115/452 (25%), Positives = 211/452 (46%), Gaps = 21/452 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+ C +GP+Y++P + +F + ++ +I L WWE D L L+ AL +N Sbjct: 1 MLITSCAMGPDYSRPQIDTT-EKFRLSQTEGR-SIANLPWWELLRDEKLQLLIDQALTEN 58 Query: 73 LTILQATERINAAKENILSVRADLFPS----------SYASISHRFIPNLKTNSTGQLDS 122 + QA + + + + D P+ + S + P N GQ Sbjct: 59 KDLKQAAASVEELQARLGITQMDFIPNITIDGNAPIETLGGFSRKGFPT-PYNYFGQTIL 117 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +W++D++G+ RR E++ A+L + L ++S + SY D F ++ IAH L Sbjct: 118 NWELDIWGRIRRSNEAARADLLAREENRRAVVLTLVSSVAQSYFDLLQFDTQLKIAHHAL 177 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 +++++ +S + G T++L L + EAE + + + LE+ + +S L G Sbjct: 178 TSWEESVAISSAQLEGGLTTRLDLDQFEAERAAAAAQVAELERQIAQKENELSVLAGRTP 237 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + P+ I G+P++L++ RPDI E+ L ++A+IG+AK+ +P Sbjct: 238 APVARGYSLSGQSTPPD----IPPGLPSELLQRRPDILQAEQTLKAAIARIGVAKATRFP 293 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPK---LYLPIFDKGKIKSNIRRAESSAQEQYITW 358 ++L G + ++ FG L P+ + + R AE+ A++ + Sbjct: 294 RITLTGFFGFSSPALASLLDSDSKFGAAGFGLAGPLLNAQTLGYEQRAAEAQAKQALAQY 353 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T+L A KEVE+AL +I Q VE ++ ++ + Y+ G S +D+L + Sbjct: 354 EQTILVAFKEVEDALAAIRTANDQYKAKQKQVEALSSALQIANLRYQGGITSYVDVLLTK 413 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R E L IA+ S V LY A+G G+ Sbjct: 414 RKLFDAESALVIARHLHLVSVVQLYKALGGGW 445 >gi|323158747|gb|EFZ44760.1| cation efflux system protein cusC [Escherichia coli E128010] Length = 450 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/456 (27%), Positives = 221/456 (48%), Gaps = 32/456 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNADWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 448 >gi|194291260|ref|YP_002007167.1| outer membrane protein [Cupriavidus taiwanensis LMG 19424] gi|193225095|emb|CAQ71106.1| putative outer membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 494 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 123/467 (26%), Positives = 205/467 (43%), Gaps = 37/467 (7%) Query: 14 LLAGCTVGPEYTKPHMPL---LPT--------QFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L GCT+ P Y +P P+ PT + G ++ +I W E F D L Sbjct: 14 VLTGCTLAPHYDRPAPPVADSFPTAPEGYATAEVKSGETRRAADI---GWREFFRDPRLQ 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------------- 109 L+ +L N + A RI A+ RADL P+ + + Sbjct: 71 ALIATSLDNNRDLRTAALRIEEARATYQVQRADLLPTVNVNGGYTRARTTAAEAATVLGQ 130 Query: 110 PNL-KTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 P + + G S +++D FG+ R + ++LA + A+++++S++ +Y+ Sbjct: 131 PGVTEVYQVGLGISSYELDFFGRVRSLSNAALAQYFATEEARRSAQISLVSEVAKAYLAE 190 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + E+ +A L + L+ +F GATS L L E+ + L + Sbjct: 191 RAYAEQYELARDTLKARESTYGLAKQRFEAGATSALDLRDNESLVAQARVAAAQLARQRA 250 Query: 228 MNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + L+G P E L + S+ + I G+P+DL+ RPDIR E++L Sbjct: 251 QAHNALEVLVGKPIGTIENLPEPMRLSDE---RIISDIPPGLPSDLLEQRPDIRQAEQQL 307 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P +SL G+I+ T F WSF P+L LPIFD G+ S Sbjct: 308 LSANANIGAARAAFFPRISLTTSVGTISPTFSGLFDAGTRAWSFAPQLTLPIFDYGRNLS 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A Q +++T+ A EV +AL + + V + L+ + Sbjct: 368 NLDLANVRKNIQIANYEKTIQTAFAEVADALVARGTLEDQVAGQEQVRNAEAARYELARL 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R G S LD LD +R E L A++ + +DLY ++G G Sbjct: 428 RFRSGVASYLDELDAQRQLFTAEQALVQARQLRLNNAIDLYRSLGGG 474 >gi|160872385|ref|ZP_02062517.1| RND efflux system, outer membrane lipoprotein, NodT family [Rickettsiella grylli] gi|159121184|gb|EDP46522.1| RND efflux system, outer membrane lipoprotein, NodT family [Rickettsiella grylli] Length = 491 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 118/495 (23%), Positives = 232/495 (46%), Gaps = 62/495 (12%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLINIDTL- 50 + ++ + L+ C VGP++ P P + P Q G S+ + T Sbjct: 1 MIAMMLGSLSACLVGPDFETPQPPKVNHYTNPPWPCRTVSAPGQG--GASQTFVQCKTFS 58 Query: 51 -KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI-LSVRADLFPSSYASISHR- 107 +WW F+ +NKL+ + ++ ++ A + A+EN+ + LFPS A ++ + Sbjct: 59 AEWWRLFHSPKMNKLICQGIAKSPNLMAAKATLREAQENLSAGIGNGLFPSVSAQLTAQR 118 Query: 108 ------FIPN------LKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSA 145 F P+ + T+ Q +++ + +D FG RR I+ + +D Sbjct: 119 GSNIGFFSPSTVASNAVTTSGISQAIFNLFNASVNASYLLDFFGGIRRQIQGLRSQVDYH 178 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 Y ++ A L++ S ++ + I + ++ + Q++ +K + + +F G SK+ + Sbjct: 179 YFELRAAYLSLTSNIVTAAITVASLRRQMDVTQQLIKEEEKQLAIMKKQFGLGGVSKIEV 238 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-- 262 + + ++ + P L+K++ H ++ L+G +P+ + + L++P Sbjct: 239 LAQQTQLAQTRATFPPLKKNWEQARHLLAILVGAFPSQQGVIPRLDLKE-----LHLPTT 293 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPG 319 + + IP+ L+R RPDIR E + A++G+A ++LYP ++L+GS ++ F Sbjct: 294 LPLSIPSALVRQRPDIRAAEALWEAANAQVGVATANLYPQIALSGSWGKSNTVGGRIFSS 353 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 W+ G L+ PIF G + + R A ++ T+QE VL A K V + L +I D Sbjct: 354 GGQLWNIGGGLFQPIFRGGALLAERRAAIAAYDAAAATYQEAVLKAFKNVADTLRAIEAD 413 Query: 380 KKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + + ++Q EL + ++L + G S L +LD +R +V + L A+ A Sbjct: 414 ARTL-RVQKQAELAANAHLNLVKQQFYLGGVSYLSLLDAQRQYQQVRIRLIQAQ---ASR 469 Query: 439 YVD---LYIAIGSGY 450 Y+D L+ A+G G+ Sbjct: 470 YMDTAALFQALGGGW 484 >gi|157160064|ref|YP_001457382.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli HS] gi|170021071|ref|YP_001726025.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli ATCC 8739] gi|157065744|gb|ABV04999.1| cation efflux system protein CusC [Escherichia coli HS] gi|169755999|gb|ACA78698.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli ATCC 8739] Length = 457 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIDIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|256023815|ref|ZP_05437680.1| copper/silver efflux system outer membrane protein CusC [Escherichia sp. 4_1_40B] gi|307137185|ref|ZP_07496541.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli H736] gi|331641065|ref|ZP_08342200.1| cation efflux system protein CusC [Escherichia coli H736] gi|323972195|gb|EGB67407.1| NodT family protein efflux transporter [Escherichia coli TA007] gi|331037863|gb|EGI10083.1| cation efflux system protein CusC [Escherichia coli H736] Length = 459 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASLDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|330901383|gb|EGH32802.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 472 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 114/463 (24%), Positives = 225/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF VL L+GC++ P+Y +P P+ P F + + + W + F D +L +L+ Sbjct: 9 LFAVLSLSGCSLIPDYQRPAAPVAAHYPQSFDSAPALSGPLAADMGWRDLFRDPTLQQLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + P T + G + S Sbjct: 69 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGGPVTSG 128 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S AQ A+L++++ + +Y+ R + Sbjct: 129 TYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEAQRS-AQLSLVASVATAYLTWRADQ 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 188 ELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQVAQDLN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N++ L+G + S + G+P++L++ RPDI E +L + A Sbjct: 248 NLTLLVGTTVAD-----SAPSRPLSSEWLAEVPAGLPSELLQRRPDILEAEYQLQSANAS 302 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F + W F P++ +PIF+ G +++++ ++ Sbjct: 303 IGAARAAFFPSITLTANAGTSSTELSGLFKAGSGGWVFSPQINIPIFNAGSLRASLDYSK 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ +A +EV + L + K+ + V+ ++ SL+ YR G Sbjct: 363 IQKNISVSKYEKSIQSAFQEVSDGLAARQTYKRQLKAQSDLVQASREYYSLAERRYRIGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R+ + L + + V+LY A+G G+ Sbjct: 423 DSSLTFLDAQRSLFSAQQTLITDRLSQLTAEVNLYKALGGGWT 465 >gi|300311155|ref|YP_003775247.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300073940|gb|ADJ63339.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 491 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 115/456 (25%), Positives = 214/456 (46%), Gaps = 29/456 (6%) Query: 17 GC-TVGPEYTKPHMPLL------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 C ++ P Y +P P+ P + N L W + F D L L+ AL Sbjct: 24 ACQSLAPHYQRPAAPVAAVYPDGPVNEAAHQVANEAASPPLPWRDYFTDPPLQALITQAL 83 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP---NLKTN-------ST 117 + + + A R+ A+ ADLFP+ + A + P NL Sbjct: 84 ENSRDLRTAALRVQEAQALYGIGHADLFPTIGAQAGLDRSRTPADLNLTRRPLVGSAYQA 143 Query: 118 GQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G S W+IDL+G+ R ++ ++L + ++ A L++++++ ++++ ER+ I Sbjct: 144 GLGLSSWEIDLWGRLRSLDDAALESARASQATRSAVALSLMAQVADAWLELAELDERLEI 203 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A+Q + +++ + + GATS+L+L ++E + ++ L++ ++ ++ L Sbjct: 204 ANQTIASRQESFRIFSRRVEVGATSRLNLTQIETLLTQAQALGAQLQQQRAQRLNALTLL 263 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + Q+ ++ P+ G+PA L+ RPD+ E +L + A IG A+ Sbjct: 264 VGSPVVLPV----GQARAGLDAVFAPLQPGLPALLLTRRPDVAAAEHRLMAANANIGAAR 319 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY---NTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +PS+SL G++ T G +H W+F P + LPIF G++++N+ +E Sbjct: 320 AAFFPSISLTGNVG-TASAELSGLFRDGSHAWTFSPSITLPIFTAGRLRNNLALSEVRRD 378 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++TV A +EV +AL + + + Q AV + ++ LS + Y G L Sbjct: 379 LAVAAYEKTVQTAFREVADALAARQWLTQQLEIAQSAVRVQRERARLSALRYDNGAAPFL 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 D+LD +R + L +R L S V LY A+G Sbjct: 439 DVLDAQRDLLSAQQQLVQIRRALLSSSVALYAALGG 474 >gi|299138007|ref|ZP_07031187.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298599937|gb|EFI56095.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 483 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 122/481 (25%), Positives = 228/481 (47%), Gaps = 35/481 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTL----K 51 MN S ++LL+GC VGP+YTKP PL P T + + + D+ K Sbjct: 1 MNKYLLPLSATVLLLSGCMVGPKYTKPTAPLAPDFKELTNWKESDGWKVAQPDSTLIRGK 60 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISH--- 106 WWE + D LN+L + N ++ A A+ I RA P+ + SIS Sbjct: 61 WWELYGDPKLNELEEQVEPSNQSLKIAEANFREARAAIRFNRAAEAPTIGTAPSISAVRD 120 Query: 107 -----RFIPNLKTNSTGQL----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 F P+L N TG D ++++DL+G+ RR + +S ++ A ++ A+L++ Sbjct: 121 SADQPYFSPSLANNGTGSFTLPFDLNYEVDLWGRVRRTVTASREQAQASAADLETARLSL 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT--SKLSLVKLEAEIKS 214 +++ Y + R + + + Y++ +EL+ +F GA S ++ K + + Sbjct: 181 HAEVAIDYFEVRSADAQKKLLDDTVAAYRQALELTVNRFEGGAAPESDVAQAKTQLDAAR 240 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++ T++++ H ++ L+G P F +Q N +P I + +PA L+ Sbjct: 241 VQASEITVQRA--QYEHALAILIGKPPAAF--DLQPIPLNLRPPAMPSIPVVLPAQLLER 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 RPDI E+ +A + +IGIA++ YP+L+L+ + N F + W+ GP L Sbjct: 297 RPDIASAERHMAAANEQIGIAQAAYYPTLNLSAAAGFEGSSLLNWFNWPSRFWAVGPGLS 356 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD G+ ++ A + +++TVL + ++VE+ + ++ + + A Sbjct: 357 ETLFDAGRRRATTDTARAGYDGAVANYRQTVLTSFQQVEDNIVVLHVLQTESAQQHEATG 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K++ L Y G + L ++ + A A D+ I +RQ ++ V L A+G G+ Sbjct: 417 SAEKALQLFQNRYEGGVDTYLQVVTSQTTALANERNDIDIMRRQF-EANVLLIKALGGGW 475 Query: 451 N 451 + Sbjct: 476 D 476 >gi|118578854|ref|YP_900104.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118501564|gb|ABK98046.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 477 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 118/459 (25%), Positives = 210/459 (45%), Gaps = 39/459 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC +GP+Y +P + P+ F + + DT +WW+ F D L+ L+ AL N I Sbjct: 15 GCMIGPDYHRPVVET-PSSFIYEDKEARATADT-EWWKQFQDPVLDALISDALTNNKNIK 72 Query: 77 QATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTN-----STG--------QL-- 120 A I A + R+ LFP Y + + R L N S G QL Sbjct: 73 IAAANIEQASGFLTQTRSPLFPQLGYGADAGR--QRLSENNAIPVSPGINNPQDYFQLFG 130 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W++DL+G RR E + ANL + L +++ + Y+ R E++ I+ + Sbjct: 131 GASWELDLWGHVRRLSEFARANLLANQEARRGVILTLVAAVAGDYLQLRGLDEQLVISKR 190 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L Y +++L L+F G S L++ + + ++ + I +E + +S LLG Sbjct: 191 NLAAYADSVKLFELQFQYGQISMLNVQQARTQYETAAATISQIESQISQLENALSILLGR 250 Query: 240 -----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P + +H + + + G+P+ L+ RPD+ E+ L + A+IG Sbjct: 251 NPGSIPRGKTIHQLASPA----------VPAGLPSQLLERRPDLAQAEQNLIAANAQIGA 300 Query: 295 AKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ +P++SL G+ +N F G + WS+G + PIF G I +R++E+ Sbjct: 301 AKALYFPTISLTGNFGFASENLSDLFKGPSKLWSYGGSITGPIFTAGAISGQVRQSEALQ 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++ + +A +VENAL + + + V+ ++ L+ + Y G Sbjct: 361 KAALQRYEAAIQSAFADVENALVIRQKLAGQLLAQERLVKASQEYEQLAKLQYDGGYAPY 420 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +L ++ E+ L+ + L SY +LY A+G G+ Sbjct: 421 LTVLSAQQQLFPAELTLTQLRASLLTSYANLYKAMGGGW 459 >gi|152992932|ref|YP_001358653.1| outer membrane efflux lipoprotein [Sulfurovum sp. NBC37-1] gi|151424793|dbj|BAF72296.1| outer membrane efflux lipoprotein [Sulfurovum sp. NBC37-1] Length = 544 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 128/486 (26%), Positives = 235/486 (48%), Gaps = 65/486 (13%) Query: 17 GCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC +GP++ P +P ++ + N + WW +F+D +LN LV A QNL I Sbjct: 30 GCAKLGPDFGGIANPPVPKKWK--QNTNHKDPSVTHWWRTFHDPTLNTLVNKAYAQNLDI 87 Query: 76 LQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQLDSDWKIDLFG 130 A RI A+ + + FP S A+ + + ++ T D W++D++G Sbjct: 88 KSAGLRIAQARAALGISQGLAFPQLQTVSGQATSTRTGLADVATAGV-NFDMGWEMDIWG 146 Query: 131 Q-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 + R IESS A L ++ A D ++VI+++ +YI+ R +ER+ AH+ + + ++ + Sbjct: 147 KYARGIESSEAQLYASVASYDNIMVSVIAEVARNYINYRTAQERLIYAHRNVVIQERVTK 206 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 ++ ++F G S+L + + ++ + + IP +E + + ++ LLG A ++ Sbjct: 207 MTEIQFNSGNVSELDMQQARTQLYNTRTSIPAIELNKVKARNALALLLGTDAAHVEKLLK 266 Query: 250 KQ-------SNNF-------------QPNLYIPINI----------GIPADLIRNRPDIR 279 ++ SN F N +N+ I A+L+ RPDI+ Sbjct: 267 QKDASLYNNSNKFIGQHKGIVQVKEEGHNGLTGVNLVPKPKLNPRYRIDANLLTRRPDIK 326 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-----W---------S 325 E ++ + A IG +DLYPS++L G+I GYNT+ W + Sbjct: 327 AAEYQVHANSALIGAKMADLYPSITLFGNI---------GYNTNNQSGSWLNGTTPLGVT 377 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP IF+ G+IK+ IR ++ +E + + ++VL+A+ EV NAL +K + Sbjct: 378 VGPSFSWNIFNYGRIKNQIRLQDAKFEESLVKYNKSVLSAVSEVSNALNGYVLTRKQQVE 437 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL-DIERATAKVEVDLSIAKRQLAKSYVDLYI 444 Q AVE ++ ++S++ Y G + +L +E+ T+ + SI K +A + + LY Sbjct: 438 NQKAVEATIRAFNISVVQYNDGLVNYQRLLTTVEKLTSTQDRFASI-KGNVALNAIALYK 496 Query: 445 AIGSGY 450 ++G G+ Sbjct: 497 SLGGGW 502 >gi|193077852|gb|ABO12729.2| Putative RND family drug transporter [Acinetobacter baumannii ATCC 17978] Length = 482 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 50/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +NDT LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDTQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 195 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 481 >gi|313681926|ref|YP_004059664.1| rnd efflux system, outer membrane lipoprotein, nodt family [Sulfuricurvum kujiense DSM 16994] gi|313154786|gb|ADR33464.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfuricurvum kujiense DSM 16994] Length = 477 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 221/464 (47%), Gaps = 44/464 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC +GP+Y +P + + T ++++ + ++WW++FNDT+L + ++ AL N + Sbjct: 15 AGCAIGPDYVRPDLAVPETFIHSDSNRSAVQAVDIQWWKTFNDTALTQAIEEALTTNYDV 74 Query: 76 LQATERINAAKENILSVRADLFP--SSYASISHRFIPN-----------LKTNSTGQLD- 121 + ++A ++ L+P ++ S++ + + N + + G L Sbjct: 75 QSSQASVDALLGQFDQAKSYLYPQINATGSMNRKSVDNASNGGYQLREGITSTYAGSLSL 134 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + ++IDLFG+ RR E++ A L S KL++ S + SY + +I +A Q Sbjct: 135 ASYEIDLFGKVRRANEAARATLLSGEYASQTMKLSIASSVAASYFKLASLQRQIDLARQN 194 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + L + + L+ LK+ G ++ L++ +E +S ++ + LE S + LLG Sbjct: 195 VALNNELVTLNELKYKHGVIAEAVLLQSVSERESAKATLSQLEASKTSEESTFNILLG-- 252 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINI--------GIPADLIRNRPDIRYQEKKLADSVAKI 292 N P PI+ +P+ ++ RPDI E+ L + AKI Sbjct: 253 ------------RNPAPVQASPIDTITIPTIPDALPSSVLSRRPDIAMAEQNLIAANAKI 300 Query: 293 GIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G+A++ +PS+ L G SI L++ S P W P + +P+F G I I+ A Sbjct: 301 GVARAAYFPSIKLTGMLGVQSIELSNFVSDPA--RIWEIAPSVSIPLFSAGLIAGQIKTA 358 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + +++++++A + +NA+ ++ T +K+++ S + Y+ G Sbjct: 359 EADRNKSIAQYKKSIVSAFNDTDNAIAQRARVQEQTTYQSARTAAIEKALTQSKLRYQVG 418 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S D+L +++ + L IAK+ + V LY A+G G++ Sbjct: 419 SISYSDMLLVQQQWIQASQQLIIAKQNALVASVSLYKALGGGWS 462 >gi|330991454|ref|ZP_08315405.1| Cation efflux system protein CusC [Gluconacetobacter sp. SXCC-1] gi|329761473|gb|EGG77966.1| Cation efflux system protein CusC [Gluconacetobacter sp. SXCC-1] Length = 505 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 224/469 (47%), Gaps = 38/469 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL------INIDTLKWWESFNDTSLNKLVK 66 + LAGCTVGP Y +P P +F+ + N + +WW F D L+KL+ Sbjct: 18 IFLAGCTVGPRY-QPDRMKPPAKFTEDDHAATPEEIEETNKELKQWWHLFRDPELDKLID 76 Query: 67 IALQQNLTILQATERINAAKENILSVRA-DLFP---SSYASISHRFIPNL---------- 112 A+ N + A +RI A + I V+A +P + A+ R+ N+ Sbjct: 77 KAIAGNYNLQVAGQRIMAERA-IRDVQASQWYPQVDAQAAAGDVRYSINIDNWPLRPGNP 135 Query: 113 ----KTNSTG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + + G + W+ID+FG+ RR +E+ ++ + + ++S+L Y+ Sbjct: 136 VNHPEASYLGYGFSASWQIDVFGRIRRSVEAQNRAVEESIEDRRAVMVMMLSELASDYMM 195 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R++IA+ + + + +L++ + +G + + + + +AE+ S + L+ Sbjct: 196 LRDQQLRLTIANNNIHVAQDAYDLTNRLYLEGVGNTMQIAQAKAELDSQTAAREPLKTHI 255 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H I L+G P T L K + P P + P+ +I NRPDIR E+ Sbjct: 256 SQITHAIDVLMGQMPGTSELEL--KVAKPLPPVPEFPSTL--PSMVIANRPDIRKAERTY 311 Query: 286 ADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 A++ A+IG+A + LYP+ L+ N + + + F W F LP+ GK Sbjct: 312 AEATARIGVAVAQLYPNFTIPLNFNPNASALY-QVFQMGGMSWQFLMMASLPLMHGGKYT 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S IR A+++A+ + ++++VLN KEVE+A+ + ++D++ L A E + + Sbjct: 371 SQIRMAQAAAEASRLAYRQSVLNGFKEVEDAMAAWHDDEEHTELLAKAAEDSALASERAR 430 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L++L ER T + ++A+ + + ++LY A+G+G+ Sbjct: 431 KLYAAGLVGFLEVLTTERTTLNAQNAEAMARLERLQDAINLYTALGAGW 479 >gi|222109536|ref|YP_002551800.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221728980|gb|ACM31800.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 481 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 106/448 (23%), Positives = 208/448 (46%), Gaps = 14/448 (3%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKIALQQNL 73 GC+ P Y +P P+ P + + +++ + + W E F D L +L+ +AL N Sbjct: 26 GCSFIPTYERPAAPV-PQAYPLAGAESTTSARAAADIDWKEYFTDPRLQRLIGMALGNNR 84 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKID 127 + A + A+ RA+ FP+ A S P+ T S G S W+ID Sbjct: 85 DLRVAMLNVEQARAQFQIQRANQFPTVNAIASGTRQPSATTGSYANQFQVGLGISAWEID 144 Query: 128 LFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FG+ + E +LA + A++++++ + ++ +E + I+ + L+ + Sbjct: 145 FFGRVAALKEQALAQYLATDEARKSAQISLVAAVASGWLTLMADEELLDISRRTLETRDE 204 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 +++L+ L+ G +S+L + E+ ++ + ++ ++ + + LLG P + + Sbjct: 205 SVKLTRLRLENGVSSELDNRQAESLAQAARATYAQQQRQRMLDENALVLLLGQPLPDDIR 264 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 S + G+P+DL+ RPD+R E++L + A IG A++ +P +SL Sbjct: 265 ASLPSSRLADATPMQALPAGLPSDLLVRRPDVRMAEQQLIGANANIGAARAAFFPRISLT 324 Query: 307 GSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 D F + +S P+L LPIFD G+ ++ + A + + +++++ Sbjct: 325 AQFGTVSDELSGLFKSGSWAFSLAPQLALPIFDAGRNQAGLESARAGREIAVAQYEKSIQ 384 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A +EV +AL ++ V + + K LS + YR G S LD+LD +R+ Sbjct: 385 TAFREVSDALAGQATLQEQVDAQRAQAQADAKRFELSDLRYRNGVASYLDLLDAQRSLFA 444 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L + + Q ++ V LY +G G+ Sbjct: 445 TQQSLVVTRLQQLQNQVTLYKVLGGGWT 472 >gi|319791601|ref|YP_004153241.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315594064|gb|ADU35130.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 490 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 203/421 (48%), Gaps = 26/421 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV-RADLFPSSYASISH- 106 WW ++D L+KLV AL N + QA ER A + + R L + S H Sbjct: 58 WWRLYHDPLLDKLVTQALAHNTDLRQAVANLERERAIESEVAGAQRPTLGVNGGPSFGHV 117 Query: 107 --------RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + P + N + +++DLFGQ RR IE++ AN ++A A +D+ ++NV Sbjct: 118 SGLSLLQKGYEPPSRFNYSAGASLSYQVDLFGQIRRSIEAAGANTEAAAAALDLVRVNVA 177 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y +A R+ IA + + L + + ++ G + + A+++ + + Sbjct: 178 AGTARAYAEACSTGLRLQIAEKSVALQQDAVNVTDRLQRAGRAGTIDTSRARAQLEQLNA 237 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P L+ + ++ ++TL G +F + P + + +G A L+R RPD Sbjct: 238 ALPPLKAERQGALYRLATLTGALPQDFPREVA--DCTVPPRVAGTLPVGDGAALLRRRPD 295 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN------THWSFGPKLY 331 IR E+ LA S A+IG+A +DLYP ++L L+ ++ P + WS GP + Sbjct: 296 IRQAERSLAASTARIGVATADLYPKVTLG----LSASSAGPAADFGRKDTMSWSMGPLIS 351 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 I + G ++ I AE++ + + TVL A++E E AL + + LQ + + Sbjct: 352 WTIPNTGIAQARIAEAEATTRGVLAKFDGTVLTALRETETALGTYARELDRHAALQASRD 411 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K + + Y+ GR + LD LD ER+ A + L+ ++ QL V L++A+G G+ Sbjct: 412 ESAKVAAQARQLYKNGRTAYLDALDAERSLAASDAALAASEAQLGDDQVVLFMALGGGWE 471 Query: 452 P 452 P Sbjct: 472 P 472 >gi|311107501|ref|YP_003980354.1| efflux transporter outer membrane factor lipoprotein 7 [Achromobacter xylosoxidans A8] gi|310762190|gb|ADP17639.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 7 [Achromobacter xylosoxidans A8] Length = 515 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 212/459 (46%), Gaps = 25/459 (5%) Query: 13 VLLAGCT-VGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + L GC VGP++ P T S + D +WW+ F D L L+ A Sbjct: 16 LCLGGCMRVGPDFEPPRTSWTADWNTPALQQASLQQLQPDARQWWQVFGDPVLEYLIAQA 75 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSY-----ASISHRFIPNLKTNS------- 116 N + A RI A+ + ++ +P S A HR + + N Sbjct: 76 DANNAGLRIAGLRIMEARAQLGIAQSGRYPQSQVVGANALYQHRSSRSAEGNPRPSSFWQ 135 Query: 117 -TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + D W++D +G+ R IES+ A A A D + + +++ SY R + R+ Sbjct: 136 YSAGFDIGWELDFWGRFSRAIESADALYFEAQANRDDVLVLLHAQVAESYYALRTAEARL 195 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + K++ E++ F G T +L L + + S IP E + ++ Sbjct: 196 RIARDNAGIQKRSYEITQKLFRSGETDELDLQQARTQYLSTLGTIPEFESQILRTRNALA 255 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P K + P + + +PA+L+ RPDIR E ++A A++G+ Sbjct: 256 VLVGRPPGPMPELDDKTA--VVPLIGRAVLQDVPANLLLRRPDIRAAELRIAAQSAQVGV 313 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESSAQ 352 A +DLYPSL+L GSIA + S G + GP L +FD G++++N+R ++ Q Sbjct: 314 AAADLYPSLTLLGSIAWSA-TSLAGTAGGMALLAGPALSWNVFDHGRLQNNVRVQDARLQ 372 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +Q+ V A +E ++A + + + + LQ + + +S++L+ YR+G Sbjct: 373 QLIVAYQDDVRQAAREADDAASGLIKALERDGILQQSAQAAGRSLTLANALYREGYTDFQ 432 Query: 413 DILDIERATAKVEVDLSIAKRQLAKS-YVDLYIAIGSGY 450 +LD ++A A V+ D + R A S + LY A+G G+ Sbjct: 433 RVLDAQQALA-VQQDAYVVNRGGAVSDLIALYKAMGGGW 470 >gi|317053255|ref|YP_004119022.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] gi|316952994|gb|ADU72466.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 493 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 228/465 (49%), Gaps = 34/465 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F +LLAGCT GPE +P + LP + G S N + KWW + D LN V+ AL Sbjct: 11 FFPLLLAGCTAGPE--QPPITTLPVKLD-GQSANFPD----KWWALYQDADLNHAVEQAL 63 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSS-------YASISHRFIPNLKTNS----TG 118 N + A + AAK + A P++ Y S ++ + S TG Sbjct: 64 TNNRDLRMAAANLQAAKAVVDETDAARLPTTSLNTQAGYGSTANDQLEAALNQSDHIRTG 123 Query: 119 Q-----LDSDWKIDLFGQRRHIESSLANLDS--AYAQVDIAKLNVISKLIPSYIDARHFK 171 +D W+ID+FG+ R + S AN D+ A+ + ++ V ++ +++ A + Sbjct: 124 SRYGIGIDVQWEIDVFGRLRSL-SHAANADALAVMAEEEGTRVLVAAETTRAWLSACSYA 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I IA + L L + +L+ + GA +L +++ ++++ + +P L+ + R + Sbjct: 183 QQIGIAQRSLQLATQGQQLASQLYQSGAGVELDVIRAQSQVDLAATQLPPLQAARRNALA 242 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ L+G P M+ QS ++ IP + G+ L+ RPD+ ++ L + A Sbjct: 243 ELAVLMGQLPDNPPQAAMRCQSPPALASIAIPHSEGM--TLLSRRPDVLQTQQALIAATA 300 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A ++LYP +S+ GS+ + + G++ T WS GP + + + ++ + + Sbjct: 301 RIGVATAELYPQISIGGSV-FSSAHQPAGWDKSGATVWSLGPLISWSFPNMSEQRARLAQ 359 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + T+L A+K+V+ +T+ + + LQ A ++++ L+ I ++ Sbjct: 360 ANAHELAALAHFDATILGALKDVQQGMTNYHAALQQHAALQRAAADSQQALKLASIARKE 419 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++LD +R ++ L+ QL + + L+ ++G G+ Sbjct: 420 GAATALELLDAQRTDIAIQHQLASTDTQLINTQIALFKSLGGGWQ 464 >gi|255015079|ref|ZP_05287205.1| outer membrane protein oprM precursor [Bacteroides sp. 2_1_7] Length = 459 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 226/465 (48%), Gaps = 26/465 (5%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N A F + ++ + C +G Y +P + L + ++ + +++ + W + D +L Sbjct: 5 NFYIAAFVVSMLAFSSCKIGKRYVRPELNLPDRIEAYTDTTDTASVENIPWESLYADEAL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR---ADLFPSSYASISHRFIPNLKTNSTG 118 L++ AL N + A ++ KE I + R A + P A++ + + N G Sbjct: 65 KDLIRKALDNNKDMKIAAAKV---KEMIAAKRISFASMLPEVGANV---YAQKERLNYGG 118 Query: 119 -----------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +L W++DL+G R E+++A+ +L +I+++ +Y Sbjct: 119 DNPKPDPEFGAKLTLSWELDLWGNLRWANEAAIASYMETVEGQRALRLTIIAEVAANYYQ 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +SI Q LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ Sbjct: 179 LCALDQELSIVQQTLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQI 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ ++S LLG E+ + + + +L + IG+P+ L+ RPD+R E KL Sbjct: 239 KIKESDLSMLLG----EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLR 294 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIR 345 + A++G+A++DL+P + L + D + F L PIF GK K+ ++ Sbjct: 295 AANAQVGVAQTDLFPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVK 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ +++ +++++VL A KEV NA+ ++ + K+I + K + L+ + Y Sbjct: 355 AAKARYEQEVYSYEKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYI 414 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +D+LD +R ++ L+ A S V LY A+G G+ Sbjct: 415 NGVISYMDVLDAQRGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 459 >gi|134296812|ref|YP_001120547.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134139969|gb|ABO55712.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 507 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 34/474 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P YT+P P+ + G S N + W Sbjct: 6 ALTAIAVALLATGCTMAPHYTRPDAPVAQAYPAGGVYATQPAAAGTRSANGQAASAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP 110 E F D L +L++IAL N + A I A++ RA LFP+ + S R+ Sbjct: 66 EFFADPRLQRLIEIALNNNRDLRVAVLNIEASRAQYQITRAGLFPTLDGTGSGNIQRYPA 125 Query: 111 NL---------KTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISK 159 + +T S G L + W++DLFG+ + + + +LA L ++YA+ +++++S+ Sbjct: 126 GVSTTRQPLITRTYSVG-LSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQ 183 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ ++ + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 184 VADQYLTLLSTEDLLKVTENTLKTAQASYDLTKLQFDNGTGSELDLRQAQTVVEQALANQ 243 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ V+ + L+G P + L S + Q NL + G+P+DL+ RPD+ Sbjct: 244 QAQARARAQAVNALVLLIGEPLPDDLP--AGMSLDAQ-NLLTDVPAGLPSDLLTRRPDVM 300 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+ L + A IG A++ +P +SL G+ + T F WSF P+L +PIF+ Sbjct: 301 QAEQTLLAANANIGAARAAFFPRISLTAAFGTASPTLGGLFKAGTAAWSFAPQLTMPIFE 360 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ +N+ A + + +++ + +A +EV + L + + L+ ++ Sbjct: 361 GGQNIANLNLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDLQIAALERNEHAQQRR 420 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 421 FDLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 474 >gi|323952850|gb|EGB48718.1| NodT family protein efflux transporter [Escherichia coli H252] Length = 460 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KE+ +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEMADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|260642741|ref|ZP_05417145.2| RND efflux system, outer membrane protein, NodT family [Bacteroides finegoldii DSM 17565] gi|260620754|gb|EEX43625.1| RND efflux system, outer membrane protein, NodT family [Bacteroides finegoldii DSM 17565] Length = 460 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 127/466 (27%), Positives = 234/466 (50%), Gaps = 35/466 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + LF+ +L C VG Y +P H+P S+ ++ ++ W + + D++L L Sbjct: 10 VILLFVGILTSCKVGKSYVRPDLHLP-----DSLAQHQDSVSFGDQDWKDIYTDSTLRSL 64 Query: 65 VKIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPN-----LKTNS 116 ++ AL N +L A R+ AA++ I + A L P ++ R + N K + Sbjct: 65 IERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTAERELENHGGEAFKRSD 122 Query: 117 T--GQLDSDWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 TFEAQFLVSWELDLWGNLRWARSASIAEYLQSVEAQRAL-RMTIVAEVAQAYYELVALDT 181 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++ Sbjct: 182 ELDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQSQVELARTATLVPDLERKISLKEND 241 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G YP + ++ F+ +PI G+P+ L+ RPDIR E+KL + AK Sbjct: 242 IAFLAGEYPNKIARSRLLQE---FKSPETLPI--GLPSTLLERRPDIRQAEQKLIAANAK 296 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +G+A ++++P L+L G + S + + L PIF GK ++ ++ ++ Sbjct: 297 VGVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKA 355 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGR 408 + + + ++++VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G Sbjct: 356 AYEVEVHNYEKSVLQAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMELAQLQYINGV 414 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 + LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 415 INYLDVLDAQRGYFDAQIGLSNAIRDELITVVQLYKALGGGWKQNP 460 >gi|188494248|ref|ZP_03001518.1| cation efflux system protein CusC [Escherichia coli 53638] gi|188489447|gb|EDU64550.1| cation efflux system protein CusC [Escherichia coli 53638] Length = 457 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 224/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYSQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|299069454|emb|CBJ40721.1| putative efflux pump outer membrane [Ralstonia solanacearum CMR15] Length = 492 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 120/482 (24%), Positives = 214/482 (44%), Gaps = 46/482 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL---------PTQFSI---GNSKNLINIDTL--K 51 A+ L V +GC VGP++ +P P PT + G ++ L+ + + Sbjct: 9 AVSVLLAVAASGCAVGPDFHRPAAPAAAGYTPTPPEPTASAPVEGGQTQRLVEGQEVAGQ 68 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F LN+LV AL+ N + A + A+EN+ + R +PS A ++ Sbjct: 69 WWTMFGSGPLNELVDAALKANPDLQSAEAALRVAQENLAAARGSFYPSVDAQMTST---R 125 Query: 112 LKTNS----------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 KT + T QL + D+FG RR +E S A + A Q + A L Sbjct: 126 QKTAAVLASPLASGDLLYSLHTAQLTVSYAPDVFGGVRRQVEVSAAQAEVAAFQREAAYL 185 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + ++ + I + ++ H+ + + + + + G + E+ + Sbjct: 186 TLTANVVAAAIQEASLRAQVQATHEAVAVASRLLATVRKQRQAGQLGAADVAAQESALAQ 245 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 IE+ +P LEK + I+ L G +P+ + +S L +P + + +P+ L Sbjct: 246 IEATLPPLEKQLALQRDLITVLAGRFPSETIAQTFELES------LQLPQALPLSLPSRL 299 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDIR E +L + A+IG+A + PS++L+ GS AL F G W Sbjct: 300 VEQRPDIRAAEAQLHAASAQIGVATAARLPSITLSADLGSSALAFSKLFTGGTGFWGLTG 359 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + PIF G + R AE++ + ++ TVL A + V + L +I+ D + + H Sbjct: 360 GITQPIFRGGTLLHQQRAAEAAYDQAAAQYRSTVLTAFQSVADTLHAIDADARALQAASH 419 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A + +KS++++ + G + +L E+A + V L+ A+ V L A+G Sbjct: 420 AADAARKSLTIAQRQWTLGLIAYPAVLQAEQAYQQSLVSLAQARAGRLADSVALLQALGG 479 Query: 449 GY 450 G+ Sbjct: 480 GW 481 >gi|30062022|ref|NP_836193.1| copper/silver efflux system outer membrane protein CusC [Shigella flexneri 2a str. 2457T] gi|30040266|gb|AAP15999.1| putative resistance protein [Shigella flexneri 2a str. 2457T] gi|281599866|gb|ADA72850.1| putative resistance protein [Shigella flexneri 2002017] gi|313646836|gb|EFS11293.1| cation efflux system protein cusC [Shigella flexneri 2a str. 2457T] gi|332763838|gb|EGJ94076.1| cation efflux system protein cusC [Shigella flexneri K-671] gi|333021878|gb|EGK41126.1| cation efflux system protein cusC [Shigella flexneri K-304] Length = 460 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPVMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + Y LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNEIY--LYTALGGGW 458 >gi|119468665|ref|ZP_01611717.1| putative outer membrane protein oprM precursor of a metabolite export system [Alteromonadales bacterium TW-7] gi|119447721|gb|EAW28987.1| putative outer membrane protein oprM precursor of a metabolite export system [Alteromonadales bacterium TW-7] Length = 468 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 120/477 (25%), Positives = 237/477 (49%), Gaps = 55/477 (11%) Query: 8 FSLFIVLLA---GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 FSL ++ LA GC + PE +P+ P +S+ + +N TLKW + F+D +L L Sbjct: 6 FSLSVLTLAALTGCQLAPEQQNLALPV-PETYSVQTEQATVN--TLKWQQFFSDKNLQVL 62 Query: 65 VKIALQQNLTILQATERINAAKENILSVR-------ADLFPS---SYASISHRFIPNLKT 114 + +L+ N + + A N+ VR + L+PS + + R +L + Sbjct: 63 IGQSLEHN-------KDLQIAMLNVQRVRGLYQIENSVLYPSLNVNGSGTRQRLPASLTS 115 Query: 115 NSTGQLDSDW---------KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + S + ++D++G+ R + +L NL S +++++++L ++ Sbjct: 116 TDEASISSQYSATAGITSYELDIWGKVRNQTQQALQNLYSTELTQYSTQVSLVAELANAW 175 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ ++ + +A + L + ++ L+ F GA SK++L +L++ + S + DI T ++ Sbjct: 176 LNYATDQQLLGLAEETLKSQQASLGLTQKSFDLGAASKITLEQLKSTVASAKVDIATYKR 235 Query: 225 SFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPN------LYIP-INIGIPADLIRNRP 276 + + + + L+G P + E L PN L +P I +G+P+DL+ RP Sbjct: 236 LLKRDKNALDLLVGKPVSPELL-----------PNKVLDSLLALPKIPVGLPSDLLTQRP 284 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DI+ E +L + A IG+A++ YPS+SL G+ + + F + WSF P + LP Sbjct: 285 DIKAAEHQLLAANANIGVARAAFYPSISLTANAGTASNDLSDLFDAGSGTWSFIPSVTLP 344 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G+ ++ + A++ Q +T+++ + A +EV +AL + ++ L ++ Sbjct: 345 IFNMGRNQAQLDVAKADQQIAVVTYKQKIQQAFREVADALADNEGYQTQLSALDMLLQSR 404 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + SLS Y +G S L +LD +R+ + + ++ L S + LY +G G+ Sbjct: 405 ESTFSLSKARYDKGVDSYLQVLDAQRSWYSAQQQQILGQQALLASQISLYKVVGGGW 461 >gi|254227291|ref|ZP_04920723.1| Outer membrane protein [Vibrio sp. Ex25] gi|262396442|ref|YP_003288295.1| putative outer membrane protein [Vibrio sp. Ex25] gi|151939903|gb|EDN58729.1| Outer membrane protein [Vibrio sp. Ex25] gi|262340036|gb|ACY53830.1| putative outer membrane protein [Vibrio sp. Ex25] Length = 547 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 248/489 (50%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL I L A TVGP+Y P LP+ +S+ +WW+ FND++LN Sbjct: 12 AILSL-IGLSACTTVGPDYVHPKQAPLPSDWSVQKAAKDTQQSEQQLQQWWQQFNDSTLN 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTN-ST 117 +LV++A +QNL + A RI A+ ++L + L +P + +++ ++ + N +T Sbjct: 71 QLVELASKQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAT 129 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 130 LSFDAAWEMDVWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ +P+LE + + + ++ L Sbjct: 190 SRRNIEIQERVVRITQVQFDSGNVTELDVQQAKNQLYTTKAALPSLEVAMKQSRTALALL 249 Query: 237 LGYPATEFLHYMQ-----KQSNNFQPNL----------------YIP----INIGIPADL 271 LG E +Q +Q +++ +P ++ + A+L Sbjct: 250 LGVLPEEVEKLLQSDGLTQQIADYEAQFKSTGRKSALSGTDERSIVPRPPLLDTQVDANL 309 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 310 VMRRPDLQVSEMQARAQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 367 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 368 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 427 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ E + K +A + Sbjct: 428 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTLAEDSYATIKGNVANQVIA 484 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 485 LYKALGGGW 493 >gi|299069606|emb|CBJ40878.1| putative outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum CMR15] Length = 508 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 118/467 (25%), Positives = 221/467 (47%), Gaps = 35/467 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIAL 69 + C VGP+Y +P + P Q+ + G+ K D + KWWE F D LN L + Sbjct: 26 MTACAVGPDYKRPSADV-PQQYKETAGDWKVGTPSDAIARGKWWEIFGDAQLNALEEQVA 84 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQ--- 119 N IL A + A+ + S RA FP+ AS S +++T STG Sbjct: 85 AANQNILVAEAQYRQAQALVQSARAQFFPTISASASASRSRSVRTTTNADGSVSTGSPSI 144 Query: 120 -------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD+ W++DL+G+ RR +ES+ A+ D++ + A L+ + L Y R Sbjct: 145 TNAQSMTLDASWELDLWGRIRRTVESNKASADASAGDLASALLSAQATLAQDYFQLRVTD 204 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + H Sbjct: 205 TQKAVLRRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQTQALLLDAEVTRAQLEH 264 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 I+ L+G + F + P IP+ I P+ ++ RPDI E+++A + Sbjct: 265 AIAVLIGKSPSAFSLAPVSAATAQELPPLPDIPLEI--PSTVLERRPDIAAAERRVAQAN 322 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG+AK+ +P+L+L S L+ D + P + WS GP L +F+ G + + + Sbjct: 323 ANIGVAKAAYFPTLTLGASAGLSADTLSRLATLP--SRIWSIGPTLAATLFEGGALNAAV 380 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L + Y Sbjct: 381 SKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQQAAQLDLNRY 440 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L+++ + E L + + + V L A+G G++ Sbjct: 441 RAGTISFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKALGGGWH 487 >gi|297538026|ref|YP_003673795.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera sp. 301] gi|297257373|gb|ADI29218.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera sp. 301] Length = 476 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 114/474 (24%), Positives = 228/474 (48%), Gaps = 31/474 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFN 57 +++L ++ + + C++ PE P +P+ D L WW+ F Sbjct: 9 ISLLVSVLFISTSFINACSLAPELKTPEVPVAQNYKETAPWMPARPADELSRGPWWKLFA 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFI 109 D L+ L + + N + A A+ +R+ LFPS + + ++ + Sbjct: 69 DPQLDDLQQKLITNNPDLAAAVAHYKQAQAYSDQLRSGLFPSLTGNANAQRNRQSDNKPL 128 Query: 110 PNLKTNS-----TGQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 +NS T + +D+++DL+ QR + + A ++A A ++ +L++ ++L Sbjct: 129 RGSASNSEYSSYTIGVQADYEVDLW-QRVSNQVSAGKATAEAAQADLESVRLSLQAQLAE 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R ++I++ + +K+++L+ + G L + + + + + +S + Sbjct: 188 NYVILRGLDKQIALLKDTVAANQKSLDLTKARHDGGIAPGLDVARAQTQRDTAQSQVEQA 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + H I+ L+G + F + + +P I +G+P+DL++ RPDI Sbjct: 248 LAQRAITEHAIAALVGVSVSSFSIAITT------AEIPVPEIPLGVPSDLLQRRPDIAAA 301 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKG 338 ++++A A IG+A++ +PSL+L+G I D N NT WS GP L L +FD G Sbjct: 302 QRRVAADNASIGVARAAFFPSLTLSGIIGFQSDTAGNWIAAPNTFWSIGPSLLLNLFDAG 361 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K K+ +++AE++ E ++ VL+A ++VE+ L +N K Q A +KS+ Sbjct: 362 KRKAQVKQAEAALDESGARYRSVVLSAFQQVEDNLALLNHYKLAADFQQSAAAAAQKSLD 421 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 ++ YR G S L++ + T + + D L + RQL ++ + L A+G G++ Sbjct: 422 FALSRYRAGAASYLEVATSQALTLQTQRDSLDLNTRQL-RASIQLIRALGGGWS 474 >gi|160882472|ref|ZP_02063475.1| hypothetical protein BACOVA_00423 [Bacteroides ovatus ATCC 8483] gi|260170919|ref|ZP_05757331.1| outer membrane protein oprM precursor [Bacteroides sp. D2] gi|293373512|ref|ZP_06619864.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|315919249|ref|ZP_07915489.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112184|gb|EDO13929.1| hypothetical protein BACOVA_00423 [Bacteroides ovatus ATCC 8483] gi|292631476|gb|EFF50102.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|313693124|gb|EFS29959.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 459 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 236/465 (50%), Gaps = 39/465 (8%) Query: 12 IVLLAG----CTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLAG C VG Y +P H+P S+ S++ ++ W + + D +L L+ Sbjct: 10 ILLLAGVLTSCKVGKSYVRPDLHLP-----DSLERSQDSVSFGDQDWRDIYTDATLRSLI 64 Query: 66 KIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDS 122 + AL N +L A R+ AA++ I + A L P ++ R + N ++ + D+ Sbjct: 65 ERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTGERELENHGGDAFKRSDT 122 Query: 123 -------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 FEAQFLVSWEVDLWGNLRWARSASIAEYLQSIEAQRAL-QMTIVAEVAQAYYELVALDTE 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 182 LDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP + ++ N+ + + +G+P+ L+ RPDIR E+KL + AK+ Sbjct: 242 AYLAGEYPNKIARSRLLQEFNSPET-----LPVGLPSTLLERRPDIRQAEQKLIAANAKV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A ++++P L+L G + S + + L PIF GK ++ ++ +++ Sbjct: 297 GVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKAA 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRY 409 + + +++++VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G Sbjct: 356 YEAEVHSYEKSVLEAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVI 414 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 + LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 415 NYLDVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGWEQNP 459 >gi|88705903|ref|ZP_01103612.1| RND efflux system, outer membrane lipoprotein [Congregibacter litoralis KT71] gi|88699974|gb|EAQ97084.1| RND efflux system, outer membrane lipoprotein [Congregibacter litoralis KT71] Length = 509 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 207/465 (44%), Gaps = 23/465 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + L + LA C VGP Y P P T Q + S+ + D ++W +D L+ Sbjct: 6 LLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADA-QFWRELDDPVLHS 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLD 121 LV+ AL N I A R A R D +P+ AS IS + + + D Sbjct: 65 LVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDASRSD 124 Query: 122 SD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W++D FG+ RR +ES A +++ A + ++ ++++L +Y R Sbjct: 125 RDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYFRLRG 184 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ +A + L + F G + + ++ S IP LE + Sbjct: 185 LQVQLQVARDNEINQADTLRLIEVLFENGRGTSFDADRARTQLALTRSRIPPLEAEAAVA 244 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L G + + P L IN G P DL+R RPD+ E++LA + Sbjct: 245 AHRIAVLTGRTPAAMAEVLDHPAA--LPELPAQINAGAPGDLLRRRPDVAAAERRLAAAT 302 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +DL+P +L G I AL + F + + D G+++S I Sbjct: 303 ARIGVAMADLFPRFTLGGLIGTQALGFGSLFERDSETRMISLGVGGSFLDVGRVRSRIAA 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A S+ E ++ TVL A++E ENAL ++ + L A E +++ + + + Sbjct: 363 ANSATAENLAVYERTVLRAMEETENALVRLSRAQTENAMLVQATEASRRAAKTARLQFEG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LD+L+ ER+ + E L+ + + A + V +Y + G++ Sbjct: 423 GAIHVLDVLEAERSRLESEDLLAQSATRRATALVAVYKTLAGGWS 467 >gi|146283936|ref|YP_001174089.1| outer membrane lipoprotein [Pseudomonas stutzeri A1501] gi|145572141|gb|ABP81247.1| outer membrane lipoprotein [Pseudomonas stutzeri A1501] Length = 488 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 112/456 (24%), Positives = 201/456 (44%), Gaps = 30/456 (6%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P++ P +P T FS + WW F+D L LV A+QQN + A R Sbjct: 23 PQHPAPQLP--DTWFSAAGAHPADAESLASWWRQFDDPQLTALVHRAMQQNHDVRLAMAR 80 Query: 82 INAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQ-------------------- 119 +++A+ + RA L PS S S ++I N + G Sbjct: 81 VDSARAQLRQSRAGLLPSFDLPGSASRQWIENDQDAEPGSPLAEFIPDDDPIAFDSWELA 140 Query: 120 LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W++DLFG R S A L SA AQ A+L V + Y+ R + + ++ Sbjct: 141 LQATWELDLFGATRARRDSAAQQLRSAEAQTVAARLAVAANTAQGYLQLRALQGQRALLV 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +++ ++ ++ L F G ++L + AE S+E+D+ L+ + TLL Sbjct: 201 EGIEVARELERIAGLLFHAGEVTRLDVEATSAERASLEADLDELDIHLAEAQLALDTLLA 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P +Q ++ P I G P DL+R RPD+ + +L + + A+ D Sbjct: 261 APPGS--SAVQLAASTAVPLAESRIAAGQPIDLLRRRPDLIAEAARLDAAELQSLAARRD 318 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+P L++ ++ + ++ + G LP+ D + I A++ + Y Sbjct: 319 LFPKLAVQAAVGRSGFALGDAVSSASNFARVGATFGLPLLDYANRGAAIELADAEGETAY 378 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++ + A++EVE LT I ++ L + +++ L+ +Y G +L ++L Sbjct: 379 IAFEQALARALEEVERGLTRIAGQQRRHAALSRTRDHRERAHRLAQRSYELGEANLSEVL 438 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R + + LA + V LY+A+G G+N Sbjct: 439 DAQRGALQARQRALEGRTALATAQVALYVALGGGWN 474 >gi|260866720|ref|YP_003233122.1| copper/silver efflux system protein CusC [Escherichia coli O111:H- str. 11128] gi|257763076|dbj|BAI34571.1| copper/silver efflux system protein CusC [Escherichia coli O111:H- str. 11128] Length = 457 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 223/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+ L I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSIRLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|17544728|ref|NP_518130.1| drug efflux lipoprotein [Ralstonia solanacearum GMI1000] gi|17427017|emb|CAD13537.1| probable drug efflux lipoprotein [Ralstonia solanacearum GMI1000] Length = 514 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 119/465 (25%), Positives = 216/465 (46%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLL------PTQFSIGN-----SKNLINIDTLKWWESFNDTSLN 62 +L+GC++ P Y + P+ P + + + L W E F D L Sbjct: 22 VLSGCSLAPRYERLAAPVAGDYPQAPAGYGVSADTAKPGETAPRATDLGWREFFPDPRLQ 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP---------- 110 +L+ ++L+ N + A I AA+ ADL P ++ A+ + P Sbjct: 82 RLIGLSLENNRDLRVAILNIEAARAQYRQQIADLLPPINATATYTRSLTPQSISQTGQDI 141 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N K G S+++++LF S+ A+ + ++++IS++ +Y++ R + Sbjct: 142 NTKQYQLGVGISNYQVNLFSVGDVTSSARASYLATEEGQRATQISLISQVAKAYLNERAY 201 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ +A Q L + +L+ +F GA+S L L + E ++S + L + + Sbjct: 202 AEQLELAQQTLKGREDYYKLAKQRFDVGASSALDLRQNETLVESARVSVAQLTRQYAQAT 261 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P L S+ + I G+P++L+ RPDIR E+KL + A Sbjct: 262 NALVLLVGSPLPADLPPPTTVSSE---KIVADIPPGLPSELLEQRPDIRQAEQKLVAANA 318 Query: 291 KIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ +PSL L ++ HD F WSF P L LPIF+ G N+ Sbjct: 319 NIGVARAAFFPSLGLTSNVGTASTALHD-LFKSGTGLWSFVPNLTLPIFNWGTNVFNLDL 377 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + +++T+ A +EV +AL + + V + + + ++LS YR Sbjct: 378 TKANQKIAVANYEKTIQTAFQEVSDALVARGTLDEQVAAQKRFRDATAERLTLSDQRYRN 437 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 G S LD+LD +R D ++ + +LA+ + VDLY A+G G Sbjct: 438 GVSSFLDVLDAQRDL--FSADQTLVQTRLARLTNAVDLYTALGGG 480 >gi|284920370|emb|CBG33431.1| cation efflux system protein [Escherichia coli 042] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 223/461 (48%), Gaps = 32/461 (6%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKL 64 F V LA GC++ P+Y +P MP+ P QFS+ N L+N W F D + L Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------T 117 + AL N + AT ++ A+ AD +P S + NLK +S T Sbjct: 67 ISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLSGEGSGSWSGNLKGDSATTREFST 126 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 127 G-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQ 184 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 185 IAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQL 244 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG A Sbjct: 245 LLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA 300 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q Sbjct: 301 RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L Sbjct: 361 QSVVNYEQKIQNAFKEVADALALRQTLNDQISAQQRYLASLQITLQRARALYQHGAVSYL 420 Query: 413 DILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 421 EVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|301027582|ref|ZP_07190912.1| putative outer membrane efflux protein OprM [Escherichia coli MS 196-1] gi|299879287|gb|EFI87498.1| putative outer membrane efflux protein OprM [Escherichia coli MS 196-1] Length = 447 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 124/455 (27%), Positives = 220/455 (48%), Gaps = 32/455 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 447 >gi|291616986|ref|YP_003519728.1| OprM [Pantoea ananatis LMG 20103] gi|291152016|gb|ADD76600.1| OprM [Pantoea ananatis LMG 20103] gi|327393440|dbj|BAK10862.1| outer membrane protein OprM precursor [Pantoea ananatis AJ13355] Length = 459 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 221/469 (47%), Gaps = 31/469 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDT 59 M LR +L V+LAGC+ + +P+ P + +G S WW++F D Sbjct: 1 MKGLRIAAALLAVVLAGCSTQVDKAPSALPIPPQWRDRVGPSAP----PEAAWWQAFGDA 56 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI------P 110 LN+LV AL+ N IL A R++ + + + D FP+ A+ R + P Sbjct: 57 DLNRLVDQALRNNPDILIARSRVDQYRAQLRATEGDNFPTLSGGVAATRQRALSAATGQP 116 Query: 111 NLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N + GQL + + +DL+G R R I+++ A L++ A A+L + S + Y+ Sbjct: 117 NDTSVFQGQLQASYNVDLWGARSRSIDAAQATLEAQQAAASAAELTIASSVASGYMTLCA 176 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + L +++L+ +F G TS+L ++ +E +S ++ +P L+ Sbjct: 177 LDEQLRVTEATLATRHNSLKLAQRQFETGYTSRLEWMQASSEYQSAKAQVPQLQHQIAQQ 236 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S L+G E + + P + + +P+ L+ RPDI +++L + Sbjct: 237 ENALSILVGMNPREIARH--RAFTAIMPQVMPGV---LPSALLNRRPDIVQAQRQLLAAD 291 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A + +K+ L P ++L S L D+ F WS G + P+ ++ + + Sbjct: 292 ATLASSKAKLLPGINLTASGTLQSSVLHQLVDDPF----RLWSVGGSILAPLLNREALTA 347 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + + +S + ++++ V NA EV NAL +I + + L+ + ++ ++ Sbjct: 348 QVDVSMASRNQALYSYEKVVRNAFSEVNNALDAIRQGEAQQEALRQQEQFVADALRIATE 407 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S LD LD +R +++L K L ++ ++LY A+G G++ Sbjct: 408 RYQNGYASYLDELDAQRTLFATQLNLVTVKNNLLQAQIELYRALGGGWS 456 >gi|186472343|ref|YP_001859685.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194675|gb|ACC72639.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 503 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 119/466 (25%), Positives = 207/466 (44%), Gaps = 38/466 (8%) Query: 16 AGCTVGPEYTKPHMPLLPT---------QFSIGNSKNLIN----IDTLKWWESFNDTSLN 62 +GCT+ P Y +P P+ T Q + G + N ID + W E F D L Sbjct: 16 SGCTLAPTYERPAAPVAATYPQGDVYDNQPAKGAATRTANDHAAID-IGWREFFIDPRLQ 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ 119 +L+++ALQ N + + ++ A+ RADL PS R +L Sbjct: 75 RLIELALQNNRDLRVSALKVEEARAQYRIQRADLMPSVSVDGTGTRSRTPKDLSYVGRAT 134 Query: 120 LDSD--------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + SD W++D FG+ R + E S+ S ++ ++S++ Y+ + Sbjct: 135 VGSDYQVAASASWELDFFGKVRSLTEQSMQTYFSTAQARKAEEILLVSQVADQYLTLVAY 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E ++ D +++ EL+ L++ G S+L L + ++ +++ + ++S Sbjct: 195 GEMLASTKNTYDTARRSYELTKLQYDMGTGSELDLREAAGTMQQAQANYESQQRSRAQAE 254 Query: 231 HNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G P A + + S L I G+P+DL+ RPDI E L + Sbjct: 255 NALVLLVGAPLAADLPQGLPLASQQ----LLADIPAGLPSDLLTRRPDIMEAEATLIGAN 310 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +PS+SL G T S PG WSFGP + +PIF G+ ++N+ Sbjct: 311 ANIGAARAAFFPSISLTGDFG-TASASLGTLFKPG-QLAWSFGPTISVPIFKGGENRANL 368 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ +++ + A +EV + L + + + LQ VE ++ LS + Y Sbjct: 369 DLAKLEKNVAVAQYEKAIQTAFREVSDGLAARGTYDRQIKALQENVESQQRRYDLSDVRY 428 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R G S L++L + + L A + VDLY +G G+ Sbjct: 429 RNGADSYLNVLTAQTDLYSAQQSLITASLNRLTNLVDLYQYLGGGW 474 >gi|104781764|ref|YP_608262.1| outer membrane protein [Pseudomonas entomophila L48] gi|95110751|emb|CAK15464.1| putative outer membrane protein precursor [Pseudomonas entomophila L48] Length = 494 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 222/472 (47%), Gaps = 41/472 (8%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKL 64 L + +L+ CT+ P+Y +P + P QF N I WWE + D LN L Sbjct: 27 GLCVAMLSACTLSPDYHRPELST-PAQFKQAEGWTQANPSDAIARGAWWEIYGDQQLNTL 85 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------ 118 V+ + N T+ Q + A+ + S RA LFPS + N TG Sbjct: 86 VEELNRSNQTVAQYEAQYRQAQALVRSSRAALFPS----LDLTTTKNRSAQGTGSSSSSL 141 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL W+IDL+G+ R + ++ A+ +++ A + +L+ S+L+ +Y Sbjct: 142 SNNSSGIRNTYNAQLGVSWEIDLWGKLRETMNANEASAEASLADMAAIRLSQQSELVQNY 201 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E+ + + Y+++++++ ++ G ++ + ++KS ++D+ L Sbjct: 202 LQLRVIDEQKRLLEATVAAYERSLKMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLAW 261 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F + N P L IP+++ P+ L+ RPDI E+ Sbjct: 262 QRAQYENAIAVLMGKAPADFAL----AATNAIPALPQIPVSL--PSQLLERRPDIASAER 315 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 K+ + + IG++++ +P LSL+ S + N N +WS GP+L L +FD GK Sbjct: 316 KVMAANSNIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALNLFDAGKR 375 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + R + + +++TVL+ KEVEN L + Q A+ ++S+ L+ Sbjct: 376 SAEVDRTVAVYDQTVAQYRQTVLDGFKEVENYLVQLKVYADEAGVRQEALAAARESLRLT 435 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E L++ + +L S V L A+G G++ Sbjct: 436 ENQYKAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVAS-VQLIAALGGGWD 486 >gi|312797142|ref|YP_004030064.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312168917|emb|CBW75920.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 533 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 116/470 (24%), Positives = 214/470 (45%), Gaps = 41/470 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTS 60 L++ CT P+Y +P P+ T G N + + W E FND Sbjct: 42 ALVSACTFQPKYERPAPPVASTFAQSGVYATQPRVAPGQQGANGVAAADIGWREFFNDPR 101 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-------------SISHR 107 L +L++++L N + A ++ A RADLFP+ A S R Sbjct: 102 LQRLIELSLNNNRDLAVAVLKVQQAAAQYRVTRADLFPTLDAVGRETKTRTPRNLSFLDR 161 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 I N S G L + W+ID +G+ R + + +LA + A++ ++S++ Y+ Sbjct: 162 TISN--QYSVG-LSASWQIDFWGRVRSLKDQALAQYLATAQARKAAEILLVSQVADQYLA 218 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 E++++ + LD + L+ L+F G S+L L + + ++ +++ ++ Sbjct: 219 VLAADEQLAVTQRTLDTASASYHLAKLQFDTGMGSELDLHQSQGIVEQARANLQAQQRVR 278 Query: 227 RMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + L+G P E L + QS L I G+P++L+ RPD+ E+ Sbjct: 279 AQAENALVLLVGQPLPEDLPAGLPLHAQS------LLADIPAGLPSELLTRRPDVMEAEQ 332 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +L + A IG A++ +P++SL G +++ T D F + W F PK+ LPIF+ G Sbjct: 333 RLLAANANIGAARAAFFPNISLTGNFGTLSPTLDGLFKPGSAAWGFTPKIDLPIFEGGLN 392 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +N++ A+ + +++ + A +EV + L + + + L V ++ + LS Sbjct: 393 VANLQLADVGKKIAIAQYEKAIQTAFREVADGLAARGTYDQQIQSLDRYVASQQRRLELS 452 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L++L + + L A+ + VDLY +G G+ Sbjct: 453 ELRYRNGVDSYLNVLTAQTDLYSAQQSLISARLNRLTNLVDLYQYLGGGW 502 >gi|330827393|ref|YP_004390631.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329312701|gb|AEB87115.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 509 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 206/465 (44%), Gaps = 23/465 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + L + LA C VGP Y P P T Q + S+ + D ++W +D L+ Sbjct: 6 LLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADA-QFWRELDDPVLHS 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLD 121 LV+ AL N I A R A R D +P+ AS IS + + + D Sbjct: 65 LVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDASRSD 124 Query: 122 SD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W++D FG+ RR +ES A +++ A + ++ ++++L +Y R Sbjct: 125 RDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYFRLRG 184 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ +A + L + F G + + ++ S IP LE + Sbjct: 185 LQVQLQVARDNEINQADTLRLIEVLFENGRGTSFDADRARTQLALTRSRIPPLEAEAAVA 244 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L G + + P L IN G P DL+R RPD+ E++LA + Sbjct: 245 AHRIAVLTGRTPAAMAEVLDHPAA--LPELPAQINAGAPGDLLRRRPDVAAAERRLAAAT 302 Query: 290 AKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG+A +DL+P +L G I AL + F + + D G+++S I Sbjct: 303 ARIGVAMADLFPRFTLGGLIGTQALGFGSLFERDSETRMISLGVGGSFLDVGRVRSRIAA 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A S+ E ++ TVL A++E ENAL ++ + L A E +++ + + + Sbjct: 363 ANSATAENLAVYERTVLRAMEETENALVRLSRAQTEYAMLVQATEASRRAAKTARLQFEG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LD+L ER+ + E L+ + + A + V +Y + G++ Sbjct: 423 GAIHVLDVLKAERSRLESEDLLAQSATRRATALVAVYKTLAGGWS 467 >gi|239813879|ref|YP_002942789.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239800456|gb|ACS17523.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 493 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 114/421 (27%), Positives = 203/421 (48%), Gaps = 26/421 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV-RADLFPSSYASISHR 107 WW ++D L++LV AL N + QA ER A + + R L S S H Sbjct: 58 WWRLYHDPLLDRLVAQALAHNTDLRQAVANLERERAIEAEVAGGQRPTLGVSGGPSFGHA 117 Query: 108 ---------FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + P + N + +++DLFGQ RR IE++ AN ++A A +D+ ++NV Sbjct: 118 SGLSMLQKGYEPPSRFNYSAGASLSYQVDLFGQIRRSIEAAGANTEAAAAALDLVRVNVA 177 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y A R+ IA + + L + + ++ G + + A+++ + + Sbjct: 178 AGTARAYAQACSTGLRLQIAQKSVALQQDALNVTERLQRAGRAGAIDANRARAQLEQLNA 237 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P L+ + ++ ++TL G +F + P + + +G A L+R RPD Sbjct: 238 ALPPLQAERQGALYRLATLTGALPQDFPREVA--GCTVPPRVAGTLPVGDGAALLRRRPD 295 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN------THWSFGPKLY 331 IR E+ LA S A+IG+A +DLYP ++L L+ ++ P + WS GP + Sbjct: 296 IRQAERSLAASTARIGVATADLYPKVTLG----LSASSAGPASDFGRKDTIGWSMGPLIS 351 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + + G ++ I +AE+ + + TVL A++E E AL + + LQ + + Sbjct: 352 WTLPNTGIAQARIAQAEAGTRAALAKFDGTVLTALRETETALGTYARELDRRAALQASRD 411 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K + + Y+ GR + L+ LD ER+ A + L+ ++ QLA V L++A+G G+ Sbjct: 412 QSAKVAAQARQLYQGGRTAYLEALDAERSLAASDAALAASEAQLADDQVVLFMALGGGWE 471 Query: 452 P 452 P Sbjct: 472 P 472 >gi|209520689|ref|ZP_03269440.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498889|gb|EDZ98993.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 504 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 119/462 (25%), Positives = 217/462 (46%), Gaps = 34/462 (7%) Query: 17 GCTVGPEYTKPHMPLLPT-----------QFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P Y +P P+ T + G S + + W F D L +L+ Sbjct: 17 GCTLAPHYERPAAPVTATFPTGGVYDQQPGATGGRSASGQAAADIGWRNFFVDPRLQQLI 76 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---------LKT 114 +IAL+ N + + + A+ VRA LFP+ + AS S P T Sbjct: 77 EIALKNNRDLRVSVLNMQASAAQYRIVRAGLFPTLNAAASQSRSRTPKDLTATGITITNT 136 Query: 115 NSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 S G L++ W+ID FG+ + + + +LA L +A A+ A+++++S++ Y+ + Sbjct: 137 YSVG-LNASWEIDFFGRVQSLKDQALATYLGTAQAR-KAAEISLVSQVANQYMTVLELDD 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L +++ ++ L+F G S+L L + + +++ +++ + + R N Sbjct: 195 LLKVTQNTLVTAQESYRITKLQFDNGTGSELDLRQSQTVVETASANLQS-QMRLRAQADN 253 Query: 233 ISTLL-GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 LL G P L S+ +L I G+P+DL+ RPDI E+ L + A Sbjct: 254 ALVLLIGEPLPADLSPGLPLSDQ---SLLTDIPAGLPSDLLTRRPDIMEAEENLLAANAN 310 Query: 292 IGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P ++L GS ++ T F + WSF P + LPIF+ G+ +N+ A Sbjct: 311 IGAARAAFFPKVTLTGSAGTLSPTLGGLFKPGSAAWSFAPSITLPIFEGGQNIANLNLAN 370 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 Q T+++ + A +EV + L + + + L+ V ++ + LS + Y+ G Sbjct: 371 IEKNVQIATYEKAIQTAFREVADGLAARGTYDEQIAALERDVAAEQRRLDLSTLRYKNGV 430 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + A + L A+ + ++ V LY A+G G+ Sbjct: 431 DSYLSVLTAQTALYVAQQALVTARMERLQNLVTLYQALGGGW 472 >gi|298385652|ref|ZP_06995210.1| outer membrane efflux protein OprM [Bacteroides sp. 1_1_14] gi|298261793|gb|EFI04659.1| outer membrane efflux protein OprM [Bacteroides sp. 1_1_14] Length = 465 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 218/466 (46%), Gaps = 19/466 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLKWWESFND 58 MN+ SL + L VG + LP ++ + + +D WW+SF D Sbjct: 1 MNVRAWSVSLLLFLSTVTAVGQTVNRYLNTPLPKEWEESGEVFQQTLPVDD-HWWKSFQD 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST- 117 T L+ L+ +A+ +N ++ A RI AA+ N+ + R + FPS + ST Sbjct: 60 TKLDSLIALAVDRNYSVAMAINRIAAARANLWAERGNFFPSIGLNAGWTRQETSGNTSTL 119 Query: 118 ---------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L W+ID+FG R+ +++ N ++ + +++ S++ +YI+ Sbjct: 120 PQSTDHYYDAALSMSWEIDVFGSIRKRVKAQKENFAASKEEYAAVMVSLASEVASAYINL 179 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ + + ++ + ++ ++++ +++ G +KL + + ++ + S ++ IP LE Sbjct: 180 RELQQELEVVNKNVASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIPQLEAGIN 239 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ LLG E ++ + P+ PI +G+P DL+ RPD+R E+ + Sbjct: 240 QYITTLAVLLGMYPQEIRPVLE--TTGTLPDYMEPIGVGMPVDLLLRRPDVRSAERSVNA 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A +G +KSD P + L GS ++ + + P L IF G++ + Sbjct: 298 QAALLGASKSDWLPKIFLKGSFGYAARDLNDLVKSKSMTYEIAPSLSWTIFSGGQLVNAT 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R A++ E + +TVL A++E +NA+ S K + L+ +++ LS+ Y Sbjct: 358 RLAKAQLDESINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQGVETLKLSLELY 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 418 KQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLISLYKALGGGW 463 >gi|237722260|ref|ZP_04552741.1| cation/multidrug efflux pump [Bacteroides sp. 2_2_4] gi|229448070|gb|EEO53861.1| cation/multidrug efflux pump [Bacteroides sp. 2_2_4] Length = 459 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 125/464 (26%), Positives = 236/464 (50%), Gaps = 37/464 (7%) Query: 12 IVLLAG----CTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLAG C VG Y +P H+P S+ S++ ++ W + + D +L L+ Sbjct: 10 ILLLAGVLTSCKVGKSYVRPDLHLP-----DSLERSQDSVSFGDQDWRDIYADATLRSLI 64 Query: 66 KIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDS 122 + AL N +L A R+ AA++ I + A L P ++ R + N ++ + D+ Sbjct: 65 ERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTGERELENHGGDAFKRSDT 122 Query: 123 -------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 FEAQFLVSWEVDLWGNLRWARSASIAEYLQSIEAQRAL-QMTIVAEVAQAYYELVALDTE 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 182 LDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP + ++ N+ + + +G+P+ L+ RPDIR E+KL + AK+ Sbjct: 242 AYLAGEYPNKIARSRLLQEFNSPET-----LPVGLPSTLLERRPDIRQAEQKLIAANAKV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSA 351 G+A ++++P L+L G + + ++ L PIF GK ++ ++ +++ Sbjct: 297 GVAYTNMFPRLALTGGFGSESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKAAY 356 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYS 410 + + +++++VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G + Sbjct: 357 EAEVHSYEKSVLEAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVIN 415 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 416 YLDVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGWEQNP 459 >gi|238024609|ref|YP_002908841.1| outer membrane protein [Burkholderia glumae BGR1] gi|237879274|gb|ACR31606.1| Outer membrane protein [Burkholderia glumae BGR1] Length = 516 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 219/457 (47%), Gaps = 27/457 (5%) Query: 18 CT-VGPEYTKPHMPLLPTQFSIG------NSKNLINIDTL--KWWESFNDTSLNKLVKIA 68 CT VGP+Y P L+ + + + L++ + + +WW ++D L+ LV+ A Sbjct: 35 CTTVGPDYRLPKQALVNAPLAGAPLDGADDGRALVSHEAVPARWWRLYDDPVLDALVQQA 94 Query: 69 LQQN--LTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTG 118 L N L + A A + S + L + ++ + L + G Sbjct: 95 LDSNTDLRVAAANLARARAALEVESAQGGLTGNLEGGAQRAQESAEQYLLTDKLPVVNEG 154 Query: 119 QLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + ++ DLFG+ RR +E++ A+ ++ A D+A++ V+++++ +Y++A E ++ Sbjct: 155 AFNFNVSYEFDLFGKLRRGVEAARADREAVKAAGDLARITVVAEVVRAYVEACSAGEELA 214 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + LDL ++ + LS G S+ + + A+++++ +DIP E R+ + ++ Sbjct: 215 IAKRSLDLQRQRVALSRRLRDAGRGSQPEVTRGVAQVQTLAADIPRFEGRRRVAQYQLAA 274 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LL E P+L I +G A L+R RPD+R E++LA + A+IG+A Sbjct: 275 LLARSPAEL--PAAAHGCRQLPSLKQAIPVGDGAALLRRRPDVREAERQLAAATARIGVA 332 Query: 296 KSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +YP++SL S T + W+ GP + G+ ++ +R AE++ Sbjct: 333 IGAMYPTVSLGASAGTTGIFGDLLSSRTNRWALGPLISWTFPANGQ-RARVREAEAATGG 391 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + VLNA++E + +L + D + L+ A + + + + Y GR S + Sbjct: 392 ALAHFDGVVLNALRETQTSLATYAADTQRADALRTAYQSARDAAEETHRLYAAGRESFIS 451 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD R V+ ++ + Q+A V L++A+G G+ Sbjct: 452 DLDATRTLTSVQARVAAVQAQVAADQVRLFLALGGGW 488 >gi|315616517|gb|EFU97134.1| cation efflux system protein cusC [Escherichia coli 3431] Length = 449 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 124/456 (27%), Positives = 220/456 (48%), Gaps = 32/456 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SLDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 448 >gi|197103292|ref|YP_002128670.1| heavy metal efflux system, outer membrane protein [Phenylobacterium zucineum HLK1] gi|196480568|gb|ACG80095.1| heavy metal efflux system, outer membrane protein [Phenylobacterium zucineum HLK1] Length = 501 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 223/479 (46%), Gaps = 42/479 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN------IDTLKWWESFNDTSLNKLV 65 + L A T GP++ +P P +S S + + + WW +F+D L L+ Sbjct: 15 LALTACATAGPDFRRPQAKT-PAAWSPKPSPTTTSRAVQEPVRSSDWWAAFDDPVLTSLI 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKT-------- 114 + A + NL + QA RI A+ +V PS A S R N T Sbjct: 74 RRASEANLDLRQAMLRIAEARAERAAVAGAGRPSLNAVASWQGQRVSENTPTGKLFGALE 133 Query: 115 --------------NSTGQL----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 N GQ D+ W++DLFG+ RR +E++ A+ ++ ++ Sbjct: 134 ALPGLAGLPAAAPANPYGQFQLGFDASWELDLFGRVRRAVEAADADGEATLEDRRDIQVT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V+ ++ YID R + + + A Q L ++ + ++ + G ++++ + + A+ I Sbjct: 194 VLGEVGRIYIDLRGAQLKRATATQNLAAAREIMRVAGDRRRLGLSTQVDVARAAAQSSLI 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ES +P +++ +++ +S LLG ++ + P + IG+PA+LI R Sbjct: 254 ESQLPLIDRQIATDINALSRLLGLEPGALRAELETVGSVPAPPAEV--AIGLPAELICRR 311 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYL 332 PDIR E + +VA+ G+A ++ YP L+L G A N + GP+ L Sbjct: 312 PDIRAAEARWHAAVARQGVASAERYPRLTLLATGGYQAQDLTNLVDWASRFGVIGPQAQL 371 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ D G+ ++ ++ A AQ + + TVL A+ EV+ ALT+ E++ L AV+ Sbjct: 372 PLLDGGRRRARMQAAAYRAQAAGVAYGRTVLGALHEVDGALTAFAEEQTRRAALARAVDQ 431 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + L+ Y G S+L++LD ER E+ L + ++ V L+ A+G G++ Sbjct: 432 NRAAFQLTRWRYENGLDSILEVLDAERTLHDSELLLVESTSAVSIHLVALHKALGGGWD 490 >gi|295690512|ref|YP_003594205.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295432415|gb|ADG11587.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 472 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 117/456 (25%), Positives = 217/456 (47%), Gaps = 28/456 (6%) Query: 19 TVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQ 71 TVGP Y P + P F +G + D + WW+ ++D LN LV+ L+ Sbjct: 21 TVGPNYKPPDEAKLNAPTAQGAF-LGAQSAAVRQDPVPAGWWKLYDDAVLNALVEEGLKA 79 Query: 72 NLTILQATERI--------NAAKENILSVRADLFPSSYASISHRFIPN----LKTNSTGQ 119 N + A + A V A +F+ + ++ + Sbjct: 80 NTDLRVAAANLARARAVAGEADDAGGFKVGASASAMHARESGEQFLLSEPLPVENLADAG 139 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + +++DL G+ +R E++ A+ D++ A +D+A+++V + + +Y++A +++A Sbjct: 140 VKVSYQVDLVGRLKRASEAAHADADASQAALDLARVSVAADVARAYVEACANGHELAVAQ 199 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +DL +N+E++ G + + L + +A + + +PT + R ++ ++TL G Sbjct: 200 RTVDLQSRNLEVTRRLVGAGKGTAVDLTRAQALLDQSRAALPTFQSRRRAALYRLATLTG 259 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P EF + ++ P L PI +G A L++ RPD+R E+ LA + A+IG+A + Sbjct: 260 KPPAEFPKAV--EACVTPPALKRPIPVGDGAALLKRRPDVRQAERTLAGATARIGVATAA 317 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 LYPS++L GS L D P N W + + +G+ +S IR+AE+ A Sbjct: 318 LYPSITLGAGAGSTGLLADIGQPAAN-RWGLTSLISWTLPGEGE-RSRIRQAEAGADAAL 375 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + VL A++E E +L + D + L+ A + + + Y+ GR L L Sbjct: 376 ARFDGVVLTALRETETSLDAYAHDLRRQAALKAARDQAALAEDQARRLYQAGRSPYLAGL 435 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R A E L+ + Q+A V+L++A+G G+ Sbjct: 436 DAQRTLAGAEAALAASDSQVAADQVNLFLALGGGWE 471 >gi|29346294|ref|NP_809797.1| outer membrane efflux protein oprM [Bacteroides thetaiotaomicron VPI-5482] gi|253568286|ref|ZP_04845697.1| outer membrane efflux protein oprM [Bacteroides sp. 1_1_6] gi|29338189|gb|AAO75991.1| outer membrane efflux protein oprM precursor [Bacteroides thetaiotaomicron VPI-5482] gi|251842359|gb|EES70439.1| outer membrane efflux protein oprM [Bacteroides sp. 1_1_6] Length = 465 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 218/466 (46%), Gaps = 19/466 (4%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLKWWESFND 58 MN+ SL + L VG + LP ++ + + +D WW+SF D Sbjct: 1 MNVRAWSVSLLLFLSTVTAVGQTVNRYLNTPLPKEWEESGEVFQQTLPVDD-HWWKSFQD 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST- 117 T L+ L+ +A+ +N ++ A RI AA+ N+ + R + FPS + ST Sbjct: 60 TRLDSLIALAVDRNYSVAMAINRIAAARANLWAERGNFFPSIGLNAGWTRQETSGNTSTL 119 Query: 118 ---------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L W+ID+FG R+ +++ N ++ + +++ S++ +YI+ Sbjct: 120 PQSTDHYYDAALSMSWEIDVFGSIRKRVKAQKENFAASKEEYAAVMVSLASEVASAYINL 179 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ + + ++ + ++ ++++ +++ G +KL + + ++ + S ++ IP LE Sbjct: 180 RELQQELEVVNKNVASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIPQLEAGIN 239 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ LLG E ++ + P+ PI +G+P DL+ RPD+R E+ + Sbjct: 240 QYITTLAVLLGMYPQEIRPVLE--TTGTLPDYMEPIGVGMPVDLLLRRPDVRSAERSVNA 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A +G +KSD P + L GS ++ + + P L IF G++ + Sbjct: 298 QAALLGASKSDWLPKIFLKGSFGYAARDLNDLVKSKSMTYEIAPSLSWTIFSGGQLVNAT 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R A++ E + +TVL A++E +NA+ S K + L+ +++ LS+ Y Sbjct: 358 RLAKAQLDESINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQGVETLKLSLELY 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 418 KQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLISLYKALGGGW 463 >gi|206563271|ref|YP_002234034.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198039311|emb|CAR55276.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 501 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 125/468 (26%), Positives = 222/468 (47%), Gaps = 45/468 (9%) Query: 17 GCTVGPEYTKPHMP------LLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GCTVGP+Y +P + L P Q+ + +D + WW +F D L+ L AL Sbjct: 21 GCTVGPDYRRPPVDTPAAWRLDPADQYWQPAAPARAPLDPV-WWTAFGDAQLDALEADAL 79 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNLKTNSTGQLD 121 + N + R + AK + SV + +P+ + S RF N T S + Sbjct: 80 RNNQNLKAVAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNYATRSMSTVQ 139 Query: 122 SD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 ++ +++DLFG+ RR++E++ A+ + A A+L + + L SY R Sbjct: 140 NEIQVGAAVSYELDLFGRVRRNVEAAQASSEQARDDFANARLVLSADLASSYFALRELDT 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 I + + +DL +K ++ + GA S L L++ A++ + + L + Sbjct: 200 EIDVVKRSIDLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLIQQRAQVETA 259 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLAD 287 I+TL+G PA EF P +PIN G+P+DL++ RPD+ E+ +A Sbjct: 260 IATLVGAPAPEFSL----------PPRVVPINAPTLPTGMPSDLLQRRPDVASAERAMAA 309 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A+IG+A++ +P ++L+ + F G T WS G L P+F+ GK+K+ Sbjct: 310 ANAQIGVARAAYFPRITLSPDLGWDA-TRFAGLFTVPALLWSVGGSLSQPLFEGGKLKAG 368 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ ++++TVL A +EV+NA+T ++ + + AV+ +K +SL+ Sbjct: 369 VDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDARKLVSLAQDR 428 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 429 YAGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 476 >gi|186471276|ref|YP_001862594.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184197585|gb|ACC75548.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 500 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 119/490 (24%), Positives = 225/490 (45%), Gaps = 65/490 (13%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKP--------------------HMPLLPTQFSIGNSK 42 LR S+ + L CTVGP+Y P H PL P Sbjct: 10 LRTCGSIAVAAALCACTVGPDYQTPLTDAPPAWHTDSYWRLAQPSHAPLAP--------- 60 Query: 43 NLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---- 98 WW++F D +L++L AL QN T++ A+ A+ + + RA L P Sbjct: 61 --------DWWKAFGDATLDRLETQALAQNQTLVAASAHYAQARATLANTRAQLIPEVDL 112 Query: 99 SSYAS---------ISHRFIPNLKT-NSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSA 145 S+ A+ +++ +PN T + Q+ ++ +DLFG+ RR +E + A+ + + Sbjct: 113 SASAARERVSKNRPVTNYAVPNQSTVQNNLQIGPTINYDVDLFGRIRRDVEGAQASAEQS 172 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 + A+L + + + Y R I + ++ + L +K ++ + G+ S L + Sbjct: 173 RDDLANARLVLTTDVATDYFSLRELDAEIDVLNRSVQLQQKALDYVTTEHDLGSVSGLDV 232 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI 265 ++ ++ + L H I+ L+ PA +F ++ Q + P IP+ Sbjct: 233 LQQKSLLDQTRVQAQLLVTQRAQFEHAIAALVAVPAPQF--SIESQVVEY-PVPAIPL-- 287 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNT 322 G+P+DL++ RPD+ E+ +A + A+IG+AK+ +PSL+L I N + Sbjct: 288 GLPSDLLQRRPDVASAERAMASANAQIGVAKAAFFPSLTLTPGIGWQSTEFANLLSAPSL 347 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 WS G L +FD G+ +N+ A Q +++ VL A ++V++ +T ++ + Sbjct: 348 MWSLGAALSQVVFDGGRRAANVDFANQGYQAAQANYRQAVLTAFQQVQDGITGLSVLDRA 407 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVD 441 ++ AV ++ ++L+ Y G + LD++ +++ E D+ I +Q+ S V Sbjct: 408 ASQSHDAVADAQRLLTLANDRYSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTTS-VA 466 Query: 442 LYIAIGSGYN 451 L A+G G++ Sbjct: 467 LVKALGGGWD 476 >gi|262278394|ref|ZP_06056179.1| multidrug efflux system lipoprotein [Acinetobacter calcoaceticus RUH2202] gi|262258745|gb|EEY77478.1| multidrug efflux system lipoprotein [Acinetobacter calcoaceticus RUH2202] Length = 491 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 125/478 (26%), Positives = 225/478 (47%), Gaps = 52/478 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTS 60 +LLAGC++ PEY +P ++P +F + K + K WW FND Sbjct: 17 LLLAGCSLAPEY-QPAKVIVPVKFKESDPK--LEDSNWKIAQPADAQSRGEWWRVFNDPL 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---NLKT 114 LN+L + A+ N ++ I A++ + +A+ PS + + P L Sbjct: 74 LNELEQQAIAGNQSLKAVAANIQASRALRSAAQAERLPSIGAGFGPTRQKLSPASLGLDD 133 Query: 115 NSTGQLDSDWK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 N+ + W+ +DLFG+ + ++ A++ A A L + + + Y Sbjct: 134 NAHTSAQTLWRAQANISYELDLFGRIASSVNAATADVQQQEALYQSALLALQADVAQGYF 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R I ++ + L + +L +F G S+L + + + E+ + +++ T+ ++ Sbjct: 194 LIRQLDAEQVIYNRTIKLLGETRDLVQTRFRNGLVSELDVSRAQTELATAQTNALTIARN 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + H+++ LLG +F Q + N I + G+P+ L+ RPDI E+ + Sbjct: 254 RAIAEHSLAVLLGKTPADFNLAAQPLATN-----SIRLPAGLPSTLLERRPDIAAAERAM 308 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFD 336 A A+IGIA++ +P L L G AL +++S G WS GP L LP+FD Sbjct: 309 AADNARIGIARAAFFPKLDLTG--ALGYESSTLGDLGKWSSRTFLLGPVAGTILSLPLFD 366 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ K+ + +A ++ ++ +++TVLNA +EVEN L+ + + A+ + + Sbjct: 367 GGQRKAGVAQARAAYEKSVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHA 426 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSI---AKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E LS R +A VDL A+G G++ Sbjct: 427 NQLSHLRYREGAISYLDVIDSDRTILQQE-QLSAQLNGSRMMAS--VDLIRALGGGWH 481 >gi|113869303|ref|YP_727792.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113528079|emb|CAJ94424.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 482 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 115/453 (25%), Positives = 211/453 (46%), Gaps = 34/453 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 +GP Y +P P P Q+ I + D+ WW+SF D LN LV+ AL+ + + A Sbjct: 21 IGPNYERPATPE-PAQYRIDTGVLSVAADS-AWWDSFGDPVLNTLVETALRNSYDVRIAA 78 Query: 80 ERINAAKENILSVRADLFPS---SYASISHR--------FIPNLKTNSTGQL--DSDWKI 126 RI+ + ++ VR+ FP S A+ R F ++ QL ++ W+I Sbjct: 79 ARIDEFRGQLMVVRSGFFPQVNLSAAATRQRAGTFNGTPFASLDGPRNSYQLLANASWEI 138 Query: 127 DLFGQ-RRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DL+G+ RR ES+ A+L ++ YA+ + L++ + ++ Y R ++ IA Q L Sbjct: 139 DLWGRIRRQAESAEASLWNAEYARRGVV-LSLAASVVQGYATLRGLDAQLEIAQQTLKAR 197 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 +++ ++ G S++ L + E + E+ IP L + +S LLG Sbjct: 198 GAGLDIFRQRYEGGVISQVELSQAENDFYVTEATIPVLRSGIAQTENALSVLLGREPGPI 257 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 K N QP P+ +PA L+ RPD+ E+ + A++G A++ P+++ Sbjct: 258 ER--GKPVNELQPP---PVGADLPAALLSRRPDVLQAEQSAIAANAQLGAAQALYLPAVN 312 Query: 305 LNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L+G +IA + + + W G L PIF G I+ ++ A + ++ + +Q T Sbjct: 313 LSGLFGAIASSPAGLWHSASQVWGIGAGLTQPIFQGGAIRGQVQTASAQREQAMLAYQGT 372 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL----SMINYRQGRYSLLDILDI 417 VL+A+ +V +AL++ E + + L+ +KS+ + S Y G S L++ Sbjct: 373 VLSALADVNSALSNGIETRNRLVSLRQ----QEKSLVVYADQSSARYEGGYSSYLEVTTA 428 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ + + LY ++G G+ Sbjct: 429 QEKLFAAQLSAVQGQVDVLTGTAALYKSLGGGW 461 >gi|301058958|ref|ZP_07199927.1| outer membrane efflux protein OprM [delta proteobacterium NaphS2] gi|300446954|gb|EFK10750.1| outer membrane efflux protein OprM [delta proteobacterium NaphS2] Length = 469 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 224/470 (47%), Gaps = 41/470 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIG----NSKNLIN---IDTLKWWESFNDTSLNKL 64 ++LL GCT+ PEYT+P P+ P Q+ G N++++ + +KW + F D +L K+ Sbjct: 5 VLLLGGCTLAPEYTRPEAPI-PAQWPQGAAYRNTQSMPGQPTVPEIKWQDFFADKALKKI 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-----NLKTNST 117 ++ AL NL + A + A+ RA+LFP+ + S S + P ++ +T Sbjct: 64 IETALDNNLDLRLAALNVERAQALYGVQRAELFPAINAQGSESKQRTPADLESTGESTNT 123 Query: 118 GQLD-----SDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + D + W+ID FG+ R +E +L ++ A++ +++++ Y+ + Sbjct: 124 SRYDVNLGVASWEIDFFGRIRSLEEQALQEYLASEQGRRSAQIALVAEVARIYLTLAADR 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+ +A L + N L +F G ++L L + + + + DIP + + + Sbjct: 184 SRLDLARSTLLSQEANYRLIKRRFELGLGTELDLRQAQTRVDTARRDIPRFTQFVAQDQN 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIRNRPDIRYQEKKLADS 288 ++ L G P E L M +S +P ++ G+ ++++ NRPDI E +L + Sbjct: 244 ALNLLAGAPVPEGLLPMDLKS-------VVPPEELSPGLSSEVLLNRPDIMAAEHRLKGA 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P +SL + D F + W+F P + LPIFD +I + +R Sbjct: 297 YAFIGAARAAFFPRISLTAAFGTASDELSGLFSAGSAAWNFTPVIVLPIFD-ARIWAALR 355 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +++ ++ T+ A +EV ++L + V Q V +++ LS I Y Sbjct: 356 VSKADRDIILTQYERTIQTAFREVADSLAVQGTINQQVAAQQSLVNATEETYRLSNIRYE 415 Query: 406 QGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +G + L +L ++ A + ++L +A+ + V LY +G G P Sbjct: 416 KGLDNYLSVLVAQQSLYAQQQALIELRLAR---LANRVSLYAVLGGGGGP 462 >gi|296282528|ref|ZP_06860526.1| RND-family efflux transporter [Citromicrobium bathyomarinum JL354] Length = 474 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 120/475 (25%), Positives = 217/475 (45%), Gaps = 43/475 (9%) Query: 8 FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L LAGC ++ PE+ +P P + L + E FND L +L+ Sbjct: 7 LALVSTALAGCASMAPEHVRPEAATAPAFDPDYRPDGSVVASQLSYREWFNDPRLVQLIG 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTN---STGQLD- 121 AL+ N +L AT RI A+ + P+ A+ S R L N TG ++ Sbjct: 67 TALENNRDLLAATARIEQARARYRIQDSRQLPTVVANASGTRTRQQLGVNPSLDTGDVEG 126 Query: 122 ----------------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK-----LNVISKL 160 S +++D +G+ +SL+N A +A L++I+ Sbjct: 127 APDSVTFNRFDVGVGVSSFELDFWGR----VASLSNAARAEYLSSVASQRAFYLSLIADT 182 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + +E+I++A + ++ + ++ L+ G TS L + E + E + Sbjct: 183 ATTYYEIVETQEQIALAEATAESRREGLRIAKLRLDNGVTSALPFRQAETLLTQAEQQLA 242 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + + + + L+G + L ++ Q+++ + + G+ +DL+ RPD Sbjct: 243 SEQLALAQLRNQLGVLVGGTVPDALPDGLPLESQADDRR------LAAGLLSDLLLVRPD 296 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPI 334 I E++L + A IG A++ +P++SL G+ D + F G WSFGP + LPI Sbjct: 297 IIAAEEQLRAARANIGAARAAFFPTISLTGNAGFASDSLDDLFSGSGFGWSFGPTISLPI 356 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G ++++ A++ EQ T+ +TV A +EV +AL + V L+ AVE + Sbjct: 357 FDWGAREADLDLAKALEVEQVATYDKTVQTAFREVSDALAGRRWLAEQVATLERAVEAQE 416 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L+ + YR+G L++LD ER L +R ++ L++A+G G Sbjct: 417 RIARLARLRYREGVADYLEVLDAERNLFSARQQLLATERAWLQNRATLFVALGGG 471 >gi|167903065|ref|ZP_02490270.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei NCTC 13177] Length = 394 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 31 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAV 90 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 91 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 150 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 151 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 208 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 209 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 264 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 265 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 324 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 325 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 364 >gi|298483503|ref|ZP_07001679.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. D22] gi|295085123|emb|CBK66646.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Bacteroides xylanisolvens XB1A] gi|298270260|gb|EFI11845.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. D22] Length = 459 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 235/465 (50%), Gaps = 39/465 (8%) Query: 12 IVLLAG----CTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLAG C VG Y +P H+P S+ +++ I+ W + + D +L L+ Sbjct: 10 ILLLAGVLTSCKVGKSYVRPDLHLP-----DSLERAQDSISFGDQDWRDIYTDATLRSLI 64 Query: 66 KIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDS 122 + AL N +L A R+ AA++ I + A L P ++ R + N ++ + D+ Sbjct: 65 ERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTAERELENHGGDAFKRSDT 122 Query: 123 -------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 FEAQFLVSWELDLWGNLRWARSASIAEYLQSIEAQRAL-RMTIVAEVAQAYYELVALDTE 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 182 LDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP + ++ N+ + + +G+P+ L+ RPDIR E+KL + AK+ Sbjct: 242 AYLAGEYPNKIARSRLLQEFNSPET-----LPVGLPSTLLERRPDIRQAEQKLIAANAKV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A ++++P L+L G + S + + L PIF GK ++ ++ +++ Sbjct: 297 GVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKAA 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRY 409 + + ++++ VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G Sbjct: 356 YEAEVHSYEKAVLEAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVI 414 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 + LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 415 NYLDVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGWEQNP 459 >gi|229591371|ref|YP_002873490.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229363237|emb|CAY50326.1| putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 472 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 218/461 (47%), Gaps = 33/461 (7%) Query: 17 GCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQ 70 GC++ P Y P + L P Q S G + D + +WW ++D LN L + L+ Sbjct: 18 GCSMAPAYKVPSLDL-PAHYREQTSDGPWHSAQPSDQMAPEWWTLYHDARLNDLQQQLLR 76 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPNLKTNST 117 N + A +A++ + A LFP AS + P++ ++T Sbjct: 77 ANPDLAAALAHFDASQAYASQLHAGLFPQITASAQPLRQRQSDSRPLRGTTQPSVYNSNT 136 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + +DL+G+ R + + A ++ + +A+L++ +L Y+ + I Sbjct: 137 AGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQLATLYVQLNGLDAQARI 196 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + LD + + ++L+ ++ S+L L + + ++ ++ + + H I L Sbjct: 197 LDRSLDDFSQALQLTRSRYEGQIASELDLTRAQNQLAEAKAQRDEVRGQRNLTEHAIGEL 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G A++F +Q + +P I +P+ L++ RPDI E+++ + A IG+A Sbjct: 257 VGVAASDFTLPPSQQL------IALPGIPSQLPSHLLQRRPDIAAAERRVFAANANIGVA 310 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ YP SL G I N N +W+ GP + LPIFD G++ +N R+A++ + Sbjct: 311 KAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSANERQAKAEFE 370 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E ++ VL A++EVE+ L + + + Q A + + + SL+M +Y+ G S L Sbjct: 371 EASAHYRSQVLKAVREVEDNLAQLRDLQLEAQDEQAAADAAQHTQSLAMNSYQAGAVSYL 430 Query: 413 DILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYNP 452 D++ + A + + L ++ RQL S V L A+G G+ P Sbjct: 431 DVVTAQTAALQAQRTLQAVQTRQLQAS-VGLVTALGGGWQP 470 >gi|300693764|ref|YP_003749737.1| multidrug efflux mfs outer membrane protein [Ralstonia solanacearum PSI07] gi|299075801|emb|CBJ35109.1| putative multidrug efflux MFS outer membrane protein [Ralstonia solanacearum PSI07] Length = 495 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 119/463 (25%), Positives = 221/463 (47%), Gaps = 35/463 (7%) Query: 17 GCTV-----GPEYTKPHMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQ 70 GC GP P L + L +WWE F D +L L A + Sbjct: 26 GCITAPDLRGPALASPEAALRSRAAVVAGEPALTEAAVPSQWWELFGDATLIGLEAEAAE 85 Query: 71 QNLTILQATERI----------NAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 NL + A RI +AA++ L+ A S+ ++ S P + + Q Sbjct: 86 SNLDLQGAAARIEESRARLGLADAARQPQLAADAGYARSAISAHS----PLARLGAPTQH 141 Query: 120 -------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 L++ W++DL+G+ RH+ ES+ ANL+++ + ++++ +++ +Y+ R + Sbjct: 142 ADTWLLGLEAGWELDLWGRLRHLSESAEANLEASGYGKEAVRVSIAAEVAYTYLQLRGVQ 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++A Q + + + ++ + G ++ A++ IE+ + L ++ Sbjct: 202 AQDTVAEQNRQIAQGLVRMAESRERNGVATRFDAAAARADVAGIEARLSQLHHKRDALMN 261 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LLG P E + + P + + +GIP++L R RPDI + +L +VA Sbjct: 262 ALALLLGKPPRELDSRL---ATAGLPAMPKRLPVGIPSELARQRPDILQADARLRATVAD 318 Query: 292 IGIAKSDLYPSLSLNGSIAL-THDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++D YP +SL GS + D S G + ++FGP L+LPIF+ G++K+ + +E Sbjct: 319 IGAAEADFYPRISLTGSAGVQAFDFSDLGSWASRRYAFGPTLHLPIFEGGRLKNTLALSE 378 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + I +Q+TVL A EV++AL + + K +LQ A+ ++ ++ ++ Y+QG Sbjct: 379 ARQRLAAIAYQQTVLRAWHEVDDALGAYASELKRHEQLQRALTQNQTALDVAQRAYQQGT 438 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L R+ +L A S V LY A+G G++ Sbjct: 439 ADFTSVLVARRSLLTSHAELIDCATASALSVVALYRALGGGWS 481 >gi|293609595|ref|ZP_06691897.1| RND efflux system [Acinetobacter sp. SH024] gi|292828047|gb|EFF86410.1| RND efflux system [Acinetobacter sp. SH024] Length = 491 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 127/477 (26%), Positives = 223/477 (46%), Gaps = 56/477 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW FND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQVRGEWWRVFNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N ++ A I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAISGNQSLKAAAANIQASRALRSAAQAERLPS----IGAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A++ A A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRIASSVNAATADVQQQEALYQSALLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L +F G S+L + + + E+ + +++ + ++ Sbjct: 195 IRQLDAEQAIYNRTIKLLGETRDLVQTRFRNGLVSELDVSRAQTELATAQTNALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG EF +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ANAEHALAVLLGKTPAEFSLAVQPLTAN-----SIRLPAGLPSALLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P L L G AL +++S G WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLDLTG--ALGYESSSLGELGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQHKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSI---AKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E LS R +A V+L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQE-QLSAQLNGTRMMAS--VNLIRALGGGWH 481 >gi|167824552|ref|ZP_02456023.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 9] Length = 395 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 32 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAV 91 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 92 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 151 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 152 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 209 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 210 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 265 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 266 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 325 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 326 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 365 >gi|167816177|ref|ZP_02447857.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 91] Length = 388 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/339 (27%), Positives = 173/339 (51%), Gaps = 14/339 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 26 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRTLAV 85 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 86 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 145 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 146 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 203 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 204 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 259 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 260 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 319 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 320 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 358 >gi|90410498|ref|ZP_01218514.1| putative outer membrane protein [Photobacterium profundum 3TCK] gi|90328739|gb|EAS45023.1| putative outer membrane protein [Photobacterium profundum 3TCK] Length = 557 Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 116/478 (24%), Positives = 226/478 (47%), Gaps = 39/478 (8%) Query: 10 LFIVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L + L CTV GP+Y +P ++ N N + +WW FND +LN LV+ A Sbjct: 13 LPLCSLTACTVVGPDYKAIESVKMPEAWT-QNDTEQANKNIEQWWMQFNDPTLNTLVERA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-----PNLKTNSTGQLDSD 123 QQNL + A RI A+ +L + ++S N N+ D+ Sbjct: 72 NQQNLDLESAGLRILQARM-VLGISDSFRYPQVQTVSGNLARAYNNENSFNNAALSFDAG 130 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++D++G+ R IES+ A + + A + + + +++ +Y++ R F+ERI ++ + ++ Sbjct: 131 WEMDIWGKYSRGIESAEAAMYATIASYNDVAVTISAEVARNYVNYRTFQERILLSKRNIE 190 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ + ++ ++F G ++L + + ++++ + ++ +P+LE + ++ LLG Sbjct: 191 VQERVVNITQVQFDSGNVTELDIQQAKSQLYATQAALPSLEIGMNQARNALAVLLGVMPF 250 Query: 243 EFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADLIRNRPD 277 E ++Q + + + Y +P ++ + A L+ RPD Sbjct: 251 EVEPFLQSDAIDARIKAYNTGYSQANAKRTAASYDDYSLVPRAPGMSTSVDASLVLRRPD 310 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-----NSFPGYNTHWSFGPKLYL 332 ++ E + A+IG+A+S LYPS SL GSI + + + + GP Sbjct: 311 LQVAELQAHAQSAQIGVAESALYPSFSLFGSIGVNSTVRSGSSFSFSDSLTLAAGPSFSW 370 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF G++K+N+R ++ QE + + VL A++EV NAL S ++ +V Sbjct: 371 NIFQYGRVKNNVRLEDARFQESLTNYNKKVLVAVQEVSNALESYELYQQQKALRLSSVSS 430 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++SM Y G+ + +L+ + E + K +A V LY A+G G+ Sbjct: 431 AVRAYNISMTQYENGQITFERLLNSVETMTRSEDSYAQIKGNVANQVVALYKALGGGW 488 >gi|237715963|ref|ZP_04546444.1| hydrophobe/amphiphile efflux-1 HAE1 [Bacteroides sp. D1] gi|262407576|ref|ZP_06084124.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645738|ref|ZP_06723424.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294808339|ref|ZP_06767094.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|229443610|gb|EEO49401.1| hydrophobe/amphiphile efflux-1 HAE1 [Bacteroides sp. D1] gi|262354384|gb|EEZ03476.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638944|gb|EFF57276.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294444415|gb|EFG13127.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] Length = 459 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 128/465 (27%), Positives = 234/465 (50%), Gaps = 39/465 (8%) Query: 12 IVLLAG----CTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLAG C VG Y +P H+P S+ +++ I+ W + + D +L L+ Sbjct: 10 ILLLAGVLTSCKVGKSYVRPDLHLP-----DSLERAQDSISFGDQDWRDIYTDATLRSLI 64 Query: 66 KIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPN-----LKTNST 117 + AL N +L A R+ AA++ I + A L P ++ R + N K + T Sbjct: 65 ERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTAERELENHGGDAFKRSET 122 Query: 118 --GQLDSDWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 Q W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 FEAQFLVSWELDLWGNLRWARSASIAEYLQSIEAQRAL-RMTIVAEVAQAYYELVALDTE 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 182 LDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP + ++ N+ + + +G+P+ L+ RPDIR E+KL + AK+ Sbjct: 242 AYLAGEYPNKIARSRLLQEFNSPET-----LPVGLPSTLLERRPDIRQAEQKLIAANAKV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A ++++P L+L G + S + + L PIF GK ++ ++ +++ Sbjct: 297 GVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKAKKAA 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRY 409 + + ++++ VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G Sbjct: 356 YEAEVHSYEKAVLEAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVI 414 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 + LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 415 NYLDVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGWEQNP 459 >gi|312961798|ref|ZP_07776296.1| outer membrane efflux protein [Pseudomonas fluorescens WH6] gi|311284057|gb|EFQ62640.1| outer membrane efflux protein [Pseudomonas fluorescens WH6] Length = 472 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 221/463 (47%), Gaps = 37/463 (7%) Query: 17 GCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQ 71 GC++ P YT P + L + Q S G + D+L WW +ND+ L+ L + L+ Sbjct: 18 GCSMAPAYTAPSVELPASYREQTSDGPWHSAQPSDSLAPAWWTLYNDSRLDSLQQQLLKA 77 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPNLKTNSTG 118 N + A +A++ + A LF AS + P++ ++T Sbjct: 78 NPDLAAALAHFDASQAYSSQLHAGLFAQITASAQPLRQRQSDSRPLRGTTQPSVYNSNTA 137 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +DL+G+ R + + A ++ + +A+L++ +L Y+ + I Sbjct: 138 GFSLSYDLDLWGKIRNQVAAGDAQAQASADDLAVARLSLQHQLASLYVQLNGLDAQSRIL 197 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L+ + + ++L+ ++ S+L L + + ++ ++ + ++ + H I L+ Sbjct: 198 SRSLEDFSQALQLTRSRYEGQIASELDLTRAQNQLAEAKAQLDEVQGQRNLTEHAIGELM 257 Query: 238 GYPATEFLHYMQKQSNNFQPN---LYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G A +F + P+ + +P I +P+ L++ RPDI E+++ + A IG Sbjct: 258 GVAAGDF---------SLPPSQGLMALPGIPSQLPSQLLQRRPDIAAAERRVFAANATIG 308 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+ +P SL G I N N +W+ GP + LPIFD G++ +N R+A + Sbjct: 309 VAKAAWFPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLMNLPIFDGGRLSANERQARAE 368 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E ++ VL A++EVE+ L + + ++ Q A + + + +L+M +Y+ G S Sbjct: 369 FEEASAQYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQALAMNSYQAGAVS 428 Query: 411 LLDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYNP 452 LD++ + A + + L ++ RQL S V L A+G G+ P Sbjct: 429 YLDVVTAQTAALQAQRTLQAVQTRQLQAS-VGLITALGGGWQP 470 >gi|253564892|ref|ZP_04842348.1| outer membrane protein oprM [Bacteroides sp. 3_2_5] gi|251946357|gb|EES86734.1| outer membrane protein oprM [Bacteroides sp. 3_2_5] Length = 458 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 119/448 (26%), Positives = 225/448 (50%), Gaps = 25/448 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C +G Y +P + L P S+ ++ ++ +WW+ + D++L L+ AL+ N +L Sbjct: 20 CKIGKSYVRPELNL-PD--SLAQHQDSLSFGDKEWWQIYTDSTLRSLIDRALEHNKDMLI 76 Query: 78 ATERIN--AAKENILSVRADLFPSSYASIS-HRFIPN-----LKTNST--GQLDSDWKID 127 A R+ AA++ I + A+L P +++ R N K + T QL W++D Sbjct: 77 AAARVKEMAAQKRIST--ANLLPDIRGTVTAERENENHGGDAFKRSDTFEAQLLFSWELD 134 Query: 128 LFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 L+G R S S+A L S AQ + ++ +I+++ +Y + + I Q L + Sbjct: 135 LWGNLRWARSASIAEYLQSVEAQRAL-RMTIIAEVAQAYYELVALDTELDIVRQTLKARE 193 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G + Sbjct: 194 EGMRLARIRFEGGLTSETSYRQSQVELARTATLVPDLERKISLKENDIAFLAGEYPNKIT 253 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 Q NF L +G+P+ L+ RPDIR E+KL + A++G+A ++++P +SL Sbjct: 254 RSRLLQEFNFPQEL----PVGLPSGLLERRPDIRQAEQKLIAANARVGVAYTNMFPRISL 309 Query: 306 NGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 G + + +S L PIF GK ++ ++ +++ + + ++++ VL Sbjct: 310 TGRVGAESTALSELLKSPYSIMEGALLTPIFGWGKNRAALKAKKAAYEAEVHSYEKAVLT 369 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDILDIERATAK 423 A KE N++ + N+ K+ V L+ +E KS + L+ + Y G + LD+LD +R Sbjct: 370 AFKETRNSIVNFNKIKE-VYDLRAKLERSAKSYVDLAQLQYINGVTNYLDVLDAQRGYFD 428 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS A R + V +Y A+G G+ Sbjct: 429 AQIGLSNAIRDELIAVVQVYKALGGGWQ 456 >gi|330954200|gb|EGH54460.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 476 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 121/464 (26%), Positives = 220/464 (47%), Gaps = 33/464 (7%) Query: 7 IFSLFIV-LLAGCTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWWESFN 57 + S F+V LL+GCT+GP+Y P H PL P S+ + WW+ FN Sbjct: 11 LLSTFLVSLLSGCTLGPDYHLPAVAVASKWHAPL-PHDASM--------VGLQDWWQQFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIP 110 D +L L+++A + ++ +A RI A+ + AD P S A I + Sbjct: 62 DPALATLLRLAQADSPSLDKALARIAQARATVDDSVADRLPQVSGGVSKSRAGIRQSGVR 121 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S LD+ W++DLFG+ RR E+S L++ A++++ +++ ++ R Sbjct: 122 QSGKTSGATLDASWELDLFGKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDDFVQYRG 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ ++ L+ + F G T+ +A + + + + + Sbjct: 182 CQMLVNAYRDQAQSQEQTARLTRVSFQAGFTAAADSSLSDASAAASTATLIKQQSECDVL 241 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINI-GIPADLIRNRPDIRYQEKKLAD 287 + ++ L G + + QP L +++ IPADL+R RPD+ E++LA Sbjct: 242 LKSLVELTGSDEEQVREVLSHNPARLPQPAL---LDVREIPADLVRQRPDLASSERELAA 298 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + AKIG A++D PSLSL GS + ++ WS GP+L +P+FD GK ++ A Sbjct: 299 ANAKIGAAQADRLPSLSLVGSFEVGTTTGV--FSRDWSLGPQLTVPLFDAGKRRAAADSA 356 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + T+++T+ A+ EVE AL ++ ++ Q A + ++ S + N++ G Sbjct: 357 RADYDTALATYRQTLRTAVMEVEQALVRLDAARRSQASTQRASDGYQASFEATDRNWQAG 416 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SLLD + R+ E++L ++ + ++ LY A+G G+ Sbjct: 417 NASLLDREEARRSALSAEIELINVQQNQVRYWIALYKALGGGWQ 460 >gi|312970645|ref|ZP_07784826.1| cation efflux system protein cusC [Escherichia coli 1827-70] gi|310337294|gb|EFQ02432.1| cation efflux system protein cusC [Escherichia coli 1827-70] Length = 447 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 124/455 (27%), Positives = 220/455 (48%), Gaps = 32/455 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSISLTSGISTASSDLSSLFNASSGMWNFIPKIDIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 447 >gi|300309656|ref|YP_003773748.1| outer membrane drug efflux protein [Herbaspirillum seropedicae SmR1] gi|300072441|gb|ADJ61840.1| outer membrane drug efflux protein [Herbaspirillum seropedicae SmR1] Length = 504 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 120/479 (25%), Positives = 220/479 (45%), Gaps = 58/479 (12%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG--------------NSKNLINIDTLKWWESFNDTSLN 62 GC+V P Y +P + P F ++ +I +WW+ F D LN Sbjct: 30 GCSVAPTYERPSVDT-PAAFKEAAPATQTGENGSQWKTAQPAEDIARGEWWKIFGDEKLN 88 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP--------- 110 L A Q N + A R+ A+ RA FP A + R P Sbjct: 89 ALEDTAQQANQDLKAAAARLGQARALTRDARAGYFPQVDAGVGATRQRPSPASQGLPADA 148 Query: 111 NLKTNS--TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + N+ Q++ +++DLFG+ ++++ A+ + A L + + + Y Sbjct: 149 DTRPNTLYRAQVNVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFLV 208 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ +DL ++++ L +F +G S++ + + AE+ S +S+ + + Sbjct: 209 RELDAAAALYRGTVDLRQESLRLVQRRFDEGDISEVDVARARAELASAQSEALGIARQRA 268 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQP--NLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ LLG EF S QP L + + G+P+ L+ RPDI E+ + Sbjct: 269 TAEHALAILLGRTPAEF-------SLPPQPLTRLAVTVPPGLPSALLERRPDIAAAERAM 321 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFD 336 A + A++G+AKS +PSL+L G L ++++ G +WS G L +P+FD Sbjct: 322 AAANARVGVAKSAFFPSLNLTG--GLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFD 379 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE----L 392 G+ ++ + RA +S +EQ +++ TVLNA +EVE+ L ++ +I+ + A + Sbjct: 380 GGRRQAGVDRARASYEEQVASYRGTVLNAFREVEDNLANL----RILDQQNRAQDEAVAA 435 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS YR+G S ++D +R + + + A+S V+L A+G G+ Sbjct: 436 SARAAKLSHTQYREGAVSYFSVIDADRTVLQQQRASVTLDGERARSTVNLIRALGGGWG 494 >gi|239502922|ref|ZP_04662232.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB900] Length = 482 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 127/481 (26%), Positives = 224/481 (46%), Gaps = 64/481 (13%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +ND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + A+ PS I F P + S L D Sbjct: 79 QQAIAGNQNLKAVAANIQASRALRSAAHAERLPS----IDAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 195 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ D++I L ++ +++ Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLS----DQRI---LDQQIQAQNQAL 420 Query: 398 S-------LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S LS + YR+G S LD++D +R + E + K + ++L A+G G+ Sbjct: 421 SSSHHANQLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGW 480 Query: 451 N 451 N Sbjct: 481 N 481 >gi|77362237|ref|YP_341811.1| putative outer membrane protein oprM precursor of a metabolite export system [Pseudoalteromonas haloplanktis TAC125] gi|76877148|emb|CAI89365.1| putative outer membrane protein oprM precursor of a metabolite export system [Pseudoalteromonas haloplanktis TAC125] Length = 470 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 114/472 (24%), Positives = 228/472 (48%), Gaps = 50/472 (10%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L + +L GC + PE + +P+ P ++ G + L W + FND L L+ + Sbjct: 10 ALTLAVLTGCQLAPEQQEIALPV-PDAYASGAEQ--AQATQLNWQQFFNDEKLQALIAQS 66 Query: 69 LQQNLTILQATERINAAKENILSVRA-------DLFPS---SYASISHRFIPNLKTNSTG 118 L+ N + + A N+ VR LFPS + + R +L + Sbjct: 67 LEHN-------KDLQIAALNVQRVRGLYQIEDSALFPSLDINGSGSRQRLPGDLSSTGEP 119 Query: 119 QLDSDW---------KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 +++S + ++D++G+ R +L L S ++++I++L ++++ Sbjct: 120 RINSQYSATVGITSYELDIWGKVRNQSAQALQTLYSTQLSQYSMQVSLIAELANAWLNYA 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ +++A + L + ++ L+ F GA S ++L +L++ + + + DI ++ + Sbjct: 180 TDQQLLALAEETLTSQQSSLSLTQQSFDLGAASAITLEQLKSTVATAKVDIAKYKRLLKR 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPN------LYIP-INIGIPADLIRNRPDIRYQ 281 + + + L+G +++ PN L +P + +G+P+DL+ RPDI+ Sbjct: 240 DKNALDLLVGNSV----------ASDLLPNASLNHLLDLPEVPVGLPSDLLTQRPDIKAV 289 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E +L + A IGIA++ YPS+SL G+ + F G + WSF P + LPIF+ G Sbjct: 290 EHQLLAANANIGIARAAFYPSISLTANAGTASSDLSGLFDGGSGTWSFVPTINLPIFNMG 349 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++N+ A+++ Q T+Q+ + A +EV + L ++ L+ V+ + + Sbjct: 350 RNQANLDVAKAAQQIALTTYQQKIQQAFREVADVLADREGYNAQLSALEQLVQSRQATFD 409 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S Y +G S L +LD +R + L K+ L S ++LY A+G G+ Sbjct: 410 ISQARYDKGADSYLQVLDSQRTWYSAQQQLITGKQALLASKINLYKAVGGGW 461 >gi|299533828|ref|ZP_07047199.1| RND efflux system outer membrane lipoprotein [Comamonas testosteroni S44] gi|298718244|gb|EFI59230.1| RND efflux system outer membrane lipoprotein [Comamonas testosteroni S44] Length = 490 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 225/476 (47%), Gaps = 52/476 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNKL 64 LLAGC VGP++ P +P QF+ ++ + +W F D L +L Sbjct: 20 LATLLAGCAVGPDFRTPELPQAGAQFARAEPSAVLKQASPEAGSDAAFWRQFQDAQLTQL 79 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------- 116 V+ AL+ N + A R++AA+ + R D FP+ ++S + + ++ S Sbjct: 80 VEQALRANQDLRAALARLDAAQALLRESRLDQFPT--LTLSGQALQQRRSESQAMGGSRS 137 Query: 117 ----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + +++ W++DLFG+ RR+IE+ A L ++ A + ++ + +++ SY D R ++ Sbjct: 138 QRSYSAGINATWELDLFGRVRRNIEAGSAELRASAADMAALQVAIAAQVAASYADLRGWQ 197 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +R+ +A + + L L+ G+ + L + +A++++ S IP L+ + H Sbjct: 198 QRLQLAEANAANQQDTLRLVQLRLAHGSGTDFDLARAQAQLETTRSRIPVLQARIAVAQH 257 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G + + + P L I G PA+L+R RPD+ E +L + A+ Sbjct: 258 RLAVLTGQVPEALIAALN--APTALPQLPETIAPGTPAELLRRRPDVAAAEARLHAATAR 315 Query: 292 IGIAKSDLYP----------------SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 +G+ ++L+P +L GS++ + F G + WSF Sbjct: 316 VGVTTAELFPRLSLGGLLGSSALSTGALFEAGSVS---RSVFLGVD--WSF--------L 362 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G++++ I +E+ AQ +Q++VL A+++ ENAL + + L A E + Sbjct: 363 DVGRVRARIAASEAGAQVALAQYQQSVLLALEDTENALVLLTRTRSEDAHLAQAAEQRAR 422 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR G L ++LD +R + + ++ + ++ V LY A+ G+ Sbjct: 423 AEQLAQRRYRLGSVGLYEVLDAQRDLYAAQDAAADSRARGLRAAVALYQALAGGWE 478 >gi|262381296|ref|ZP_06074434.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296473|gb|EEY84403.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 1494 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 113/452 (25%), Positives = 221/452 (48%), Gaps = 20/452 (4%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++ + C +G Y +P + L + ++ + +++ + W + D +L L+K AL Sbjct: 1050 MLAFSSCKIGKRYARPELNLPDRIEAYTDTTDTASVENIPWESLYADETLKDLIKKALDN 1109 Query: 72 NLTILQATERINAAKENILSVR---ADLFPSSYASI---SHRF-----IPNLKTNSTGQL 120 N + A ++ KE I + R A++ P A+I R P +L Sbjct: 1110 NKDMKIAAAKV---KEMIAAKRISFANMLPEVGANIYAQKERLNYGGDDPKPDPEFGAKL 1166 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DL+G R E+++A+ +L +I+++ +Y + +SI Q Sbjct: 1167 TLSWELDLWGNLRWANEATIASYMQTVEGQRALRLTIIAEVAANYYQLCALDQELSIVQQ 1226 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 LD ++ + L+ L++ G TS+ + + + E+ E+ IP+LE+ ++ ++S LLG Sbjct: 1227 TLDARREGVRLAKLRYEGGLTSETAYNQAQVELARTETLIPSLERQIKIKESDLSMLLG- 1285 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E+ + + + +L + IG+P+ L+ RPD+R E KL + A++G+A++DL Sbjct: 1286 ---EYTDDIPRGLSLSDQHLPDALPIGLPSSLLERRPDMRQAEFKLRAANAQVGVAQTDL 1342 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +P + L + D + F L PIF GK K+ ++ A++ +++ ++ Sbjct: 1343 FPKIRLTSNYGFESDELSSILKSPAGFIAGSLLQPIFAMGKNKAKVKAAKARYEQEVYSY 1402 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++VL A KEV NA+ ++ + K+I + K + L+ + Y G S +D+LD + Sbjct: 1403 EKSVLGAFKEVNNAIVTVRKVKEIRASRMNLEASASKYLELAQLQYINGVISYMDVLDAQ 1462 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R ++ L+ A S V LY A+G G+ Sbjct: 1463 RGLLDAQIGLNNAVLDELLSVVYLYKALGGGF 1494 >gi|91787913|ref|YP_548865.1| RND efflux system outer membrane lipoprotein NodT [Polaromonas sp. JS666] gi|91697138|gb|ABE43967.1| RND efflux system, outer membrane lipoprotein, NodT [Polaromonas sp. JS666] Length = 489 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/465 (25%), Positives = 216/465 (46%), Gaps = 35/465 (7%) Query: 17 GCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT-------------LKWWESFNDTS 60 GC++ P+Y +P P+ P + S + ++W F+D Sbjct: 20 GCSMIPKYERPAAPIAAEWPASSWMAESAQATAGASPAAATAPAVPAADIEWQSFFSDPK 79 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---- 116 L L++ AL+ N + A I A+ RAD FP+ A ++ PN NS Sbjct: 80 LRLLIEAALRNNRDLRIAVLNIEQARAQFQIRRADQFPTVNAGLTGSRQPNADGNSITST 139 Query: 117 --TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G L + +++D FG+ + E++LA + ++++I+ + +Y+ +E Sbjct: 140 YSAGLLVTSYELDFFGRVASLKETALAQYLATEEGRKTTQISLIAAVANTYLSLLADEEL 199 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++I Q L +++ +LS L+F G TS+L + E+ ++ + L + ++ + + Sbjct: 200 LAITQQTLATREESFKLSKLRFDNGVTSELDFRQAESLTEAARVSLAQLVRQRALDQNAL 259 Query: 234 STLLGYPATEFLHYMQKQSNNFQPN-LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + LLG P T L + + + G+P+DL+ RPDIR E++L + A I Sbjct: 260 TLLLGQPLTGELAVALPAGKGLADTPMMVDVPAGLPSDLLTRRPDIRQAEQQLLAANADI 319 Query: 293 GIAKSDLYPSLSLNGSI--ALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL S A +H F + W+ P+L LPIFD G+ ++ + A + Sbjct: 320 GAARAAFFPRISLTASAGSASSHLSGLFKSGSYGWTLAPQLLLPIFDAGRNRAGLDSANA 379 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++++ A +EV +AL + + Q LS + Y+ G Sbjct: 380 GRDIAVAQYEKSIQTAFREVSDALAGRATLGEQLRAQQAQANAEATRFKLSDLRYQNGIA 439 Query: 410 SLLDILDIERA--TAKVEVDLSIAKRQLA--KSYVDLYIAIGSGY 450 S LD+LD +R+ TA+ ++ + +LA +S V LY +G G+ Sbjct: 440 SYLDLLDAQRSLFTARQ----AVVQTRLAQLQSQVTLYKTLGGGW 480 >gi|171320157|ref|ZP_02909220.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171094601|gb|EDT39652.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 488 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 213/461 (46%), Gaps = 33/461 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTSLNKL 64 GC++ P Y +P P+ P ++ + T W F D +L Sbjct: 24 GCSLAPRYERPTAPV-PASYATVDGGTQQGAGTAGTAGTADAALLDDWRAYFTDPALQAW 82 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQL 120 + AL N + A R++ A+ RADL PS A++ + ++ P ++ ++ L Sbjct: 83 IDAALANNRDLRIAAGRLDEARALYGVQRADLMPSVDANLGYERTRQYDPVVRESAVSGL 142 Query: 121 ------DSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E Sbjct: 143 YRAGVGVSAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLHE 201 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++++A + LD ++ L+ ++ G + + L E + S + L++ +V Sbjct: 202 QLALAQRTLDARERIAALTRRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQSVRA 261 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G +F + P+ G P+ L+ RPDIR E +L + A+I Sbjct: 262 LQLLAG----DFARSVPADGTALDTLAIAPVAPGAPSALLERRPDIRQAESRLKAANAQI 317 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P ++L GS++ + F G + W F P++ LPIF G+ ++N+ A + Sbjct: 318 GAARAAFFPRVALTTDYGSVSDAFSSLFAGGTSVWMFAPRITLPIFAGGRNRANLDVANA 377 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++TV A +EV +A + + + + Q + L+ Y G Sbjct: 378 RKYIAVAEYEKTVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVA 437 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L++LD +R+T + +L K + + LY A+G G+ Sbjct: 438 TYLELLDAQRSTYESGHELIRLKALRLANAIALYRALGGGW 478 >gi|221200195|ref|ZP_03573238.1| outer membrane protein OprM [Burkholderia multivorans CGD2M] gi|221206652|ref|ZP_03579664.1| outer membrane protein OprM [Burkholderia multivorans CGD2] gi|221173307|gb|EEE05742.1| outer membrane protein OprM [Burkholderia multivorans CGD2] gi|221180434|gb|EEE12838.1| outer membrane protein OprM [Burkholderia multivorans CGD2M] Length = 507 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 38/476 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P YT+P P+ S G S N + W Sbjct: 6 ALTAIAVALLAAGCTLAPHYTRPDAPVAQAFPSGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYA 102 E F D L +L++IAL+ N + + I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRTPQ 125 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L +AYA+ A+++++S++ Sbjct: 126 GVSQTGAPYISRVYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QAAEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ + L+G P + L + Q NL + G+P+DL+ RPD Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPPGLPLDAQ------NLLADVPAGLPSDLLTRRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 I E+ L + A IG A++ +P +SL G+ T F WSF P++ +PI Sbjct: 299 IMQAEQTLLAANANIGAARAAFFPRISLTGAFGTASPTLGGLFKAGTAAWSFAPQITMPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 359 FEGGQNIANLNLANVQKRIEIANYEKAIQSAFREVADGLAARGTYDQQIAALERNTHAQQ 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 419 RRFDLSDLRYKNGVDSYLSVLTAQTDLYTAQQALINARLARWTNLVDLYRALGGGW 474 >gi|162146907|ref|YP_001601368.1| outer membrane factor [Gluconacetobacter diazotrophicus PAl 5] gi|161785484|emb|CAP55049.1| putative outer membrane factor [Gluconacetobacter diazotrophicus PAl 5] Length = 491 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/484 (25%), Positives = 216/484 (44%), Gaps = 56/484 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSL 61 A+ ++ C VGP Y P L P + + +DT WWE F+D L Sbjct: 23 AVALTMTLMTTACAVGPNYHAPDTHLQPFHSAAAVDMRQVTSTPPLDT--WWEGFHDPEL 80 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISH-- 106 ++ + L QNL + A R+ ++ + A L P S I H Sbjct: 81 VRIEQRVLTQNLDLAAAIARVRQSRGAAEAATARLLPTLDFNPQASANRLSQEGLIGHVV 140 Query: 107 RFIPNLKTN-----STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKL 160 R IP+ + +G + W+IDLFG R + + + A + ++ + + Sbjct: 141 RTIPSFHRDYRTYDVSGA--ASWEIDLFGGLRRGQEAARDEAEAAQMERVGERIMIAADA 198 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y R + R+++A + + + +EL + T G +++ L + EA ++S +P Sbjct: 199 ADAYFQIRGDQARLAVAEKQITVDAHLLELVRQRRTSGVSNERELAQAEALLQSARQTVP 258 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPA--------DL 271 L + ++ + L+G Q + L P I IPA D+ Sbjct: 259 LLRIALEAQLNRLDVLMGV-----------QPGTYAAELGTPSEIPAIPAIGGTNKPTDV 307 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSF 326 +R RPDI E++LA S A+IG A D YP LSL+G SI H + PG+ S Sbjct: 308 LRRRPDILAAERRLAASNARIGAALGDYYPKLSLSGILGFQSINPQHLFTAPGFQAVGSG 367 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + IFD GKI + +++A + E ++ TVL+A ++V+N+ T++ + ++ +L Sbjct: 368 A--IRWRIFDFGKIDAEVQQARGANTEALARYRLTVLHAAEDVKNSFTTLVQTEQRSGEL 425 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q V ++ LS +++ G L D+LD ER + L++ + ++ V + A+ Sbjct: 426 QTEVASLTRARDLSQQSFQAGVIPLTDVLDAERQLLDSQDQLALNRANPGRAAVSSFRAL 485 Query: 447 GSGY 450 G G+ Sbjct: 486 GGGW 489 >gi|295700082|ref|YP_003607975.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295439295|gb|ADG18464.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 473 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 228/468 (48%), Gaps = 28/468 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTK--PH--MPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +++ + S + LA C V P PH L P +S+ ++ +N D WW F D Sbjct: 5 VMKLVASAAFLTLAACAVQPATHADLPHTVQTLAPAAWSVDAPQDSVNTDA--WWAQFGD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN--- 111 +++L++ L NL + A ER+ +++ + RA L P ++ AS + + P Sbjct: 63 PVMHQLIESVLTGNLDVQAAAERVKQSQDLVTQNRAALLPELNANAGASTARQNTPPPLG 122 Query: 112 -LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ G L + W D+FG +R + +S A + + A ++ +L + + +YID R Sbjct: 123 YVRQAGFG-LAASWTPDVFGGERLAVLASQAQVSGSVAALNQLRLALAANTAAAYIDLRW 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ I + + ++L+ + G +++L + + + +++ +++ IP ++ + + Sbjct: 182 AQAQLQILDDNEQIRSRALKLTQARLHYGLSTQLDVARAQNQLQDLQAQIPRMQSTVQHQ 241 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---IPADLIRNRPDIRYQEKKLA 286 + I+ G + + + +P +P+D + +RPD+R + Sbjct: 242 LSLIAVYSGRTPESLDTLLLSNARE----IPVPAQSAPQVLPSDALLHRPDVRTAYALVE 297 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 A++G++K+ YP +N + L +S+ G T +S PIF+ G+I + Sbjct: 298 QRAAEVGVSKAQRYPQFKINLTNGLLA-SSYLGMPTLTDNLFSAALNATSPIFNAGRITA 356 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 NI +ES +E + Q+T+L A+KEVE+ + + V +L A++ ++ LS Sbjct: 357 NIDASESRMRESQLGLQQTMLQALKEVEDNRSDLVSGAAQVQRLAGALDASNHALRLSTE 416 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S LD+LD ++A + L+ A+R+ A S + LY ++G G+ Sbjct: 417 LYKGGASSFLDVLDAQQAYLRDSESLNQARREHALSAIALYRSLGGGW 464 >gi|125505594|gb|ABN45752.1| PseA [Pseudomonas syringae pv. syringae] Length = 518 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 32/453 (7%) Query: 17 GCTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GCT+GP+Y P H PL P S+ + WW+ FND +L L+++A Sbjct: 64 GCTLGPDYQLPAVKVASQWHAPL-PHGASM--------VGLQDWWQQFNDPALATLLRMA 114 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLD 121 + ++ +A RI A+ + AD P S A I + S LD Sbjct: 115 QADSPSLDKALARIAQARATLDGSVADRLPQVSGGVSKSRAGIRQSGVRQSGKTSGATLD 174 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR E+S L++ A++++ +++ ++ R + ++ Sbjct: 175 ASWELDLFGKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDDFVQYRGCQMLVNAYRDQ 234 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ L+ + F G T+ +A S + + + + + ++ L G Sbjct: 235 AQSQEQTARLARVSFQAGFTAAADSSLSDASAASSNATLIKQQGECDVLLKSLVELTGSN 294 Query: 241 ATEFLHYMQKQSNNF-QPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + QP L +++ IPA+L+R RPD+ E++LA + AKIG A++D Sbjct: 295 EDQVREVLSHNPARLPQPAL---LDVREIPANLLRQRPDLASSERELAAANAKIGAAQAD 351 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 PSLSL GS + ++ WS GP+L +P+FD GK ++ + A + T+ Sbjct: 352 RLPSLSLVGSFEVGTTTGV--FSREWSLGPQLTVPLFDAGKRRAAVDSARADYDSALATY 409 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T+ A+ EVE AL ++ ++ Q A E ++ S + N++ G SLLD + Sbjct: 410 RQTLRTAVMEVEQALVRLDAARRSQASTQRASEGYEASFQATDRNWQAGNASLLDREEAR 469 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ E++L ++ + ++ LY A+G G+ Sbjct: 470 RSALSAEIELITVQQNQVRYWIALYKALGGGWQ 502 >gi|94313712|ref|YP_586921.1| NodT family outer membrane lipoprotein [Cupriavidus metallidurans CH34] gi|93357564|gb|ABF11652.1| RND efflux system, outer membrane lipoprotein, NodT family [Cupriavidus metallidurans CH34] Length = 496 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 213/455 (46%), Gaps = 26/455 (5%) Query: 19 TVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQN 72 TVGP++ P ++ + + G + ++I + WW ++D +++LV+ AL N Sbjct: 22 TVGPDHKVPDDAVVKSSAANGPFAGTDSDAVSIGDVPNDWWRLYDDPRIDELVQQALVAN 81 Query: 73 LTILQATERINAAKENILSVRADLFPSS-YASISHRF------------IPNLKTNSTGQ 119 + A + + V A+ P + + + + R IP + G Sbjct: 82 TDLRVAAANLKRSIAVYHEVEAENLPETKFRASAERGQIAGEPLLHEEKIPVMNFGDIG- 140 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L+ + ID +G+ +R E++LA+ +++A +D A++ V+++ + +Y+ + +A Sbjct: 141 LNVSYLIDFWGKLKRADEAALASAQASHAALDQARVGVVAETVRAYVQGCTATHELHVAA 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 LDL ++ ++L+ G L++ EA+ ++ S +P + ++ +LG Sbjct: 201 HQLDLQERGVKLAQKLVDAGRGQPTDLLRAEAQADTLRSALPKYRAEQEGAAYRLAVMLG 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P T + + P L + +G L++ RPD+R E++LA + AKIG+A +D Sbjct: 261 KPPTAL--DVSSVACEHVPALKQALPVGDGMALLKRRPDVRQAERELASATAKIGVATAD 318 Query: 299 LYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 L+P + + S T D+ HW +GP + I G ++ I E A+ Sbjct: 319 LFPQIRIGASAGFTGILDHLGQAPTAHWGWGPAISWTIPTSG-TRARIHNMEYGAEGALA 377 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 + VL A++E + AL++ + L+ A + ++ + + ++ GR L LD Sbjct: 378 HFDGVVLKALRETQTALSAYTHELDRNASLRSARDKANEAARQNRLLWQAGRSPYLQSLD 437 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R A + L+ + Q+A ++L++A+G G+ Sbjct: 438 ADRTLANTDAALAASDAQVAMDQINLFLALGGGWQ 472 >gi|74311108|ref|YP_309527.1| copper/silver efflux system outer membrane protein CusC [Shigella sonnei Ss046] gi|73854585|gb|AAZ87292.1| putative resistance protein [Shigella sonnei Ss046] Length = 460 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y + MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRTAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|323179960|gb|EFZ65517.1| cation efflux system protein cusC [Escherichia coli 1180] Length = 447 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/455 (27%), Positives = 220/455 (48%), Gaps = 32/455 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDS 122 N + AT ++ A+ AD +P S + NLK N STG L++ Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNA 120 Query: 123 DWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + Sbjct: 121 SFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEET 179 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 180 LRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG-- 237 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ + Sbjct: 238 --SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFF 295 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+ L I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + Sbjct: 296 PSIRLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVN 355 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD Sbjct: 356 YEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDA 415 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 416 ERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 447 >gi|299146293|ref|ZP_07039361.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. 3_1_23] gi|298516784|gb|EFI40665.1| RND efflux system, outer membrane protein, NodT family [Bacteroides sp. 3_1_23] Length = 459 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/465 (27%), Positives = 236/465 (50%), Gaps = 39/465 (8%) Query: 12 IVLLAG----CTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLAG C VG Y +P H+P S+ S++ ++ W + + D +L L+ Sbjct: 10 ILLLAGVLTSCKVGKSYVRPDLHLP-----DSLERSQDSVSFGDQDWRDIYTDATLRSLI 64 Query: 66 KIALQQNLTILQATERIN--AAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQLDS 122 + AL N +L A R+ AA++ I + A L P ++ R + N ++ + D+ Sbjct: 65 ERALDHNKDMLIAAARVKEMAAQKRIST--AALLPDIKGKVTGERELENHGGDAFKRSDT 122 Query: 123 -------DWKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++DL+G R S S+A L S AQ + ++ +++++ +Y + Sbjct: 123 FEAQFLVSWEVDLWGNLRWARSASIAEYLQSIEAQRAL-QMTIVAEVAQAYYELVALDTE 181 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I Q L ++ + L+ ++F G TS+ S + + E+ + +P LE+ + ++I Sbjct: 182 LDIVKQTLKAREEGVRLARIRFAGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G YP + ++ N+ + + +G+P+ L+ RPDIR E+KL + AK+ Sbjct: 242 AYLAGEYPNKIARSRLLQEFNSPET-----LPVGLPSTLLERRPDIRQAEQKLIAANAKV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 G+A ++++P L+L G + S + + L PIF GK ++ ++ +++ Sbjct: 297 GVAYTNMFPRLALTGGFG-SESTSLSELLKSPYAVMEGALLTPIFGWGKNRAALKARKAA 355 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRY 409 + + +++++VL A KE NA+ + N+ K+ V +L+ +E KS M L+ + Y G Sbjct: 356 YEAEVHSYEKSVLEAFKETRNAIVNFNKIKE-VYELRANLERSAKSYMDLAQLQYINGVI 414 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 + LD+LD +R ++ LS A R + V LY A+G G+ NP Sbjct: 415 NYLDVLDAQRGYFDAQIGLSNAIRDELIAVVQLYKALGGGWEQNP 459 >gi|170750705|ref|YP_001756965.1| RND efflux system outer membrane lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170657227|gb|ACB26282.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium radiotolerans JCM 2831] Length = 511 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 107/470 (22%), Positives = 215/470 (45%), Gaps = 47/470 (10%) Query: 15 LAGCTVGPEYTKPHM--PLLPTQFSIGN---------------SKNLINIDTLKWWESFN 57 + GC VGP+YT+P + PL Q + ++ ++ WW F Sbjct: 28 MTGCVVGPDYTRPSVETPLAYKQGGVREDSPAYVAARRKGWREARPSDAVERGDWWRVFK 87 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNS 116 D +L++L+++ N ++ QA A+ + S +A L+P+ + S R T + Sbjct: 88 DPALDRLIRLVDVDNQSLRQAVANYRQARALVASAQAALYPTVIGAPSITRTGSGTATRT 147 Query: 117 TGQL--DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L + W++DLFG RR IES A S A + + +L++ +++ Y+ R+ Sbjct: 148 NVSLLGQASWELDLFGGTRRTIESEAALAQSDAATIALTRLSIQAEIAADYLTVRYADSL 207 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + ++ +K+ + ++ ++ G ++ ++ + ++++IE+ + + V+ I Sbjct: 208 QKVLDENVENFKRTLAITENQYAAGVAARSDVITAQTQVQTIEAQAIAVRLTRVQYVNAI 267 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLADS 288 +TL+G P +E P IP N +GIP DL+ RPD+ E+ + Sbjct: 268 ATLIGRPPSEVSI----------PVAGIPRNPPGVPVGIPGDLLERRPDVAQAERLVQAQ 317 Query: 289 VAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+A + +P++++ G T + N WS +FD G + +R Sbjct: 318 SERIGVAVAAFFPTVTISAQGGISGATRNGLLSAANQVWSVAASGSEVLFDGGARTAALR 377 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH----AVELHKKSMSLSM 401 AE+ +++ VL A EVEN + ++ +I+ + Q AV+L +K++ +++ Sbjct: 378 SAEAGYDSAVANYRQVVLAAFAEVENQMAAV----RILGQQQRAQDTAVDLSRKAVEITL 433 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G + ++ + EV+ + + V L A+G G++ Sbjct: 434 NEYRAGTQNFTTVVTAQNLLVNNEVNALQVRLSRFTAAVTLIRALGGGWD 483 >gi|53714395|ref|YP_100387.1| outer membrane protein oprM [Bacteroides fragilis YCH46] gi|60682415|ref|YP_212559.1| putative puter membrane protein [Bacteroides fragilis NCTC 9343] gi|265766154|ref|ZP_06094195.1| outer membrane protein oprM [Bacteroides sp. 2_1_16] gi|52217260|dbj|BAD49853.1| outer membrane protein oprM precursor [Bacteroides fragilis YCH46] gi|60493849|emb|CAH08640.1| putative puter membrane protein [Bacteroides fragilis NCTC 9343] gi|263253822|gb|EEZ25287.1| outer membrane protein oprM [Bacteroides sp. 2_1_16] gi|301163878|emb|CBW23433.1| putative puter membrane protein [Bacteroides fragilis 638R] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 119/448 (26%), Positives = 225/448 (50%), Gaps = 25/448 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C +G Y +P + L P S+ ++ ++ +WW+ + D++L L+ AL+ N +L Sbjct: 20 CKIGKSYVRPELNL-PD--SLAQHQDSLSFGDKEWWQIYTDSTLRSLIDRALEHNKDMLI 76 Query: 78 ATERIN--AAKENILSVRADLFPSSYASIS-HRFIPN-----LKTNST--GQLDSDWKID 127 A R+ AA++ I + A+L P +++ R N K + T QL W++D Sbjct: 77 AAARVKEMAAQKRIST--ANLLPDIRGTVTAERENENHGGDAFKRSDTFEAQLLFSWELD 134 Query: 128 LFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 L+G R S S+A L S AQ + ++ +I+++ +Y + + I Q L + Sbjct: 135 LWGNLRWARSASIAEYLQSVEAQRAL-RMTIIAEVAQAYYELVALDTELDIVRQTLKARE 193 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + + L+ ++F G TS+ S + + E+ + +P LE+ + ++I+ L G + Sbjct: 194 EGMRLARIRFEGGLTSETSYRQSQVELARTATLVPDLERKISLKENDIAFLAGEYPNKIT 253 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 Q NF L +G+P+ L+ RPDIR E+KL + A++G+A ++++P +SL Sbjct: 254 RSRLLQEFNFPQEL----PVGLPSGLLERRPDIRQAEQKLIAANARVGVAYTNMFPRISL 309 Query: 306 NGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 G + + +S L PIF GK ++ ++ +++ + + ++++ VL Sbjct: 310 TGRVGSESTALSELLKSPYSIMEGALLTPIFGWGKNRAALKAKKAAYEAEVHSYEKAVLT 369 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMINYRQGRYSLLDILDIERATAK 423 A KE N++ + N+ K+ V L+ +E KS + L+ + Y G + LD+LD +R Sbjct: 370 AFKETRNSIVNFNKIKE-VYDLRAKLERSAKSYVDLAQLQYINGVTNYLDVLDAQRGYFD 428 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS A R + V +Y A+G G+ Sbjct: 429 AQIGLSNAIRDELIAVVQVYKALGGGWQ 456 >gi|301346153|ref|ZP_07226894.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB056] gi|301510862|ref|ZP_07236099.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB058] gi|301597083|ref|ZP_07242091.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB059] Length = 482 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 220/474 (46%), Gaps = 50/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +ND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 195 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 481 >gi|221211375|ref|ZP_03584354.1| outer membrane protein OprM [Burkholderia multivorans CGD1] gi|221168736|gb|EEE01204.1| outer membrane protein OprM [Burkholderia multivorans CGD1] Length = 507 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 38/476 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P YT+P P+ S G S N + W Sbjct: 6 ALTAIAVALLAAGCTLAPHYTRPDAPVAQAFPSGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + + I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L +AYA+ A+++++S++ Sbjct: 126 GVSQTGAPYISRVYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QAAEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ + L+G P + L + Q NL + G+P+DL+ RPD Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPPGLPLDAQ------NLLADVPAGLPSDLLTRRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 I E+ L + A IG A++ +P +SL G+ T F WSF P++ +PI Sbjct: 299 IMQAEQTLLAANANIGAARAAFFPRISLTGAFGTASPTLGGLFKAGTAAWSFAPRITMPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 359 FEGGQNIANLNLANVQKRIEIANYEKAIQSAFREVADGLAARGTYDQQIAALERNTHAQQ 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 419 RRFDLSDLRYKNGVDSYLSVLTAQTDLYTAQQALINARLARWTNLVDLYRALGGGW 474 >gi|260554419|ref|ZP_05826640.1| outer membrane protein [Acinetobacter baumannii ATCC 19606] gi|260410961|gb|EEX04258.1| outer membrane protein [Acinetobacter baumannii ATCC 19606] Length = 483 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 220/474 (46%), Gaps = 50/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +ND LN+L Sbjct: 21 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLNELE 79 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 80 QQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDDN 135 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 136 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 195 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 196 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLGSELDVSRAQTELATAQTTALNIARNR 255 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 256 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 311 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 368 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 369 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 428 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 429 QLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGNQIIASINLIRALGGGWS 482 >gi|169795308|ref|YP_001713101.1| putative Outer membrane efflux protein [Acinetobacter baumannii AYE] gi|213158706|ref|YP_002320004.1| multidrug efflux system outer membrane protein [Acinetobacter baumannii AB0057] gi|215482841|ref|YP_002325044.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB307-0294] gi|88758828|emb|CAJ77855.1| Putative RND family drug transporter [Acinetobacter baumannii AYE] gi|169148235|emb|CAM86098.1| putative Outer membrane efflux protein [Acinetobacter baumannii AYE] gi|213057866|gb|ACJ42768.1| multidrug efflux system outer membrane protein [Acinetobacter baumannii AB0057] gi|213987745|gb|ACJ58044.1| multidrug efflux system lipoprotein [Acinetobacter baumannii AB307-0294] Length = 483 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 220/474 (46%), Gaps = 50/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +ND LN+L Sbjct: 21 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLNELE 79 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 80 QQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDDN 135 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 136 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 195 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 196 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIARNR 255 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 256 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 311 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 368 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 369 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 428 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 429 QLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 482 >gi|184158826|ref|YP_001847165.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|183210420|gb|ACC57818.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|322507362|gb|ADX02816.1| Outer membrane protein [Acinetobacter baumannii 1656-2] gi|323518740|gb|ADX93121.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] Length = 482 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/474 (25%), Positives = 220/474 (46%), Gaps = 50/474 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW +ND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQTRGEWWRIYNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + ++ Sbjct: 195 IRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLGSELDVSRAQTELATAQTTALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG P +F +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTLLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P LSL G AL +++S WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E + K + ++L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 481 >gi|332286665|ref|YP_004418576.1| multidrug efflux system outer membrane protein [Pusillimonas sp. T7-7] gi|330430618|gb|AEC21952.1| multidrug efflux system outer membrane protein [Pusillimonas sp. T7-7] Length = 521 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 119/488 (24%), Positives = 227/488 (46%), Gaps = 54/488 (11%) Query: 8 FSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKN---LINIDTLK------------ 51 F+L VL L C +GP+Y +P M L + + K ++ T + Sbjct: 23 FALAGVLTLGACALGPDYERPTMDLGEAYKELESGKQGEQIVGASTAEVQGWVPAQPGDA 82 Query: 52 -----WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 WW+ FND L++L+ NL+I+QA + A+ + S R+ FP+ AS + Sbjct: 83 ALRGDWWQLFNDPILSQLMLTLQDANLSIIQAEAQYRQAQALLQSARSGFFPTVGASAAG 142 Query: 107 RFIPNLKTNST----------GQL----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 + ++ ST Q D W+ DL+G+ RR +E+S A L ++ A V Sbjct: 143 ARSGSGRSASTISGVGGDNPSNQFSLSGDVSWEPDLWGRVRRSVEASGAGLQASRADVAT 202 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 +L++ S L +Y R + Q + Y++++ ++ ++ G +++ + + Sbjct: 203 TRLSMQSTLAQTYFQLRVMDAERRLLQQTVKAYERSLTVTQNRYNAGIAAQVDIESSRTQ 262 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGI 267 +++ + + L+ H I+ LLG F + P+ + + +G+ Sbjct: 263 LENGRTQLLALDWQRAQLEHAIAVLLGQTPASF---------SLAPSELVARAPVVPVGL 313 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHW 324 P+ L++ RPD+ E++ A++ A+IG+A++ +PSL+L G A + W Sbjct: 314 PSQLVQRRPDVAAAERRTAEANARIGVAQAAWFPSLTLSAQGGYRASEWAQWLSAPASFW 373 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S GP L L IFD G ++ ++ + ++ Q ++++TVL A++EVE+ L ++ + Sbjct: 374 SLGPALALTIFDGGAREAQLQESRAAYDAQAASYRQTVLTALREVEDYLVQLHVLGQEQI 433 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLY 443 A+ ++S+ L+ Y G L ++ +E E LS+ +L S V L Sbjct: 434 TQGRALASARESLRLTRNQYEAGLIDYLSVVQVETTALSTERSALSLVSDRLLTS-VQLI 492 Query: 444 IAIGSGYN 451 A+G G++ Sbjct: 493 AALGGGWD 500 >gi|66045856|ref|YP_235697.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63256563|gb|AAY37659.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 476 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 32/453 (7%) Query: 17 GCTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GCT+GP+Y P H PL P S+ + WW+ FND +L L+++A Sbjct: 22 GCTLGPDYQLPAVKVASQWHAPL-PYGASM--------VGLQDWWQQFNDPALATLLRMA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLD 121 + ++ +A RI A+ + AD P S A I + S LD Sbjct: 73 QADSPSLDKALARIAQARATLDGSVADRLPQVSGGVSKSRAGIRQSGVRQSGKTSGATLD 132 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR E+S L++ A++++ +++ ++ R + ++ Sbjct: 133 ASWELDLFGKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDDFVQYRGCQMLVNAYRDQ 192 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ L+ + F G T+ +A S + + + + + ++ L G Sbjct: 193 AQSQEQTARLTRVSFQAGFTAAADSSLSDASAASSNATLIKQQGECDVLLKSLVELTGSN 252 Query: 241 ATEFLHYMQKQSNNF-QPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + QP L +++ IPA+L+R RPD+ E++LA + AKIG A++D Sbjct: 253 EDQVREVLSHNPARLPQPAL---LDVREIPANLLRQRPDLASSERELAAANAKIGAAQAD 309 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 PSLSL GS + ++ WS GP+L +P+FD GK ++ + A + T+ Sbjct: 310 RLPSLSLVGSFEVGTTTGV--FSREWSLGPQLTVPLFDAGKRRAAVDSARADYDSALATY 367 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T+ A+ EVE AL ++ ++ Q A E ++ S + N++ G SLLD + Sbjct: 368 RQTLRTAVMEVEQALVRLDAARRSQASTQRASEGYEASFQATDRNWQAGNASLLDREEAR 427 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ E++L ++ + ++ LY A+G G+ Sbjct: 428 RSALSAEIELITVQQNQVRYWIALYKALGGGWQ 460 >gi|94310686|ref|YP_583896.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354538|gb|ABF08627.1| RND efflux system, outer membrane lipoprotein, NodT [Cupriavidus metallidurans CH34] Length = 488 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 227/468 (48%), Gaps = 30/468 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +R S + LAGC+ P Y P M L P +++ + L I +WW S++D L+ Sbjct: 1 MRLAISAVCIWLAGCSFAPTYHIPEMDL-PAKYAEASDPVLSQIPA-EWWTSYHDDDLDA 58 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 L++ N T+ ++ + ++ + RA FP++ A+ S ++ N G+ Sbjct: 59 LIRRIDVTNQTLKRSIALLQDSRAQADAARAAYFPTAGANASATS-SHVSANVVGRSLAG 117 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + W+ DLFG+ ++++ + + ++ V +L + +++ Y R Sbjct: 118 KTTPDRLIGFSATWEPDLFGRIGNAVDAATSRVQASADDVAAVRLTLQAEVATDYFAIRS 177 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 S+ Q +D Y + + ++ G ++ + + +A+ S ++ + L + Sbjct: 178 LDREASLLRQTVDAYSSVLSMVTNRYKGGIAAESDVAQAQAQRDSTKAQLADLTLARTQL 237 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H ++TL+G PA+ F P +P +P++L++ RPDI E++++ + Sbjct: 238 QHALATLVGEPASTFSIAPHDAYGTQLP--VVPA--AVPSELLKRRPDIAAVERRVSAAN 293 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 ++IG+AK+ +PSL LN S + + PG W+ GP L IFD GK ++ + Sbjct: 294 SQIGVAKAAFFPSLMLNLSGGVESSGLAGLLTAPGR--FWAVGPALAATIFDGGKRQAGV 351 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A++ +++TVL A+++VE++ + K+ + + AV+ +++++ + Y Sbjct: 352 DSAQAQFDAAAADYRQTVLTAVQDVEDSYAATRLLKEAASSQEAAVQASQRALAQATDRY 411 Query: 405 RQGRYSLLDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYN 451 ++G + LD+ +E T E L SI +RQL S V L+ ++G G+ Sbjct: 412 KKGAAAYLDVNVVEATTLTNERTLESIHRRQLVSS-VALFRSLGGGWQ 458 >gi|320107851|ref|YP_004183441.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319926372|gb|ADV83447.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 506 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 128/510 (25%), Positives = 223/510 (43%), Gaps = 77/510 (15%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLP----TQFSIGNSKNLINI-------DT 49 M F+L +VL++GC VGP+Y + ++P P + +G+ + N D Sbjct: 1 MKFAHVTFALSLVLISGCRVGPKYVRANLPTAPPDAYKENQVGSEEARANGWRQAHPEDA 60 Query: 50 L---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 + KWWE F +T LN L + N I Q E AA+ + + A L+PS IS Sbjct: 61 MLRGKWWEVFQNTELNGLEEQLNIDNQNIKQYFENYMAARAVVRNAHASLYPS----IS- 115 Query: 107 RFIPNLKTNSTGQ----------------------------------LDSDWKIDLFGQR 132 F P+L G + W+ DLFG+ Sbjct: 116 -FAPSLNVQGQGSQSTATATTSTTDTSGTGTTGTTLASSTSQSYSLPFSASWEPDLFGKV 174 Query: 133 RHIESSLANLDSAYAQVDIAKL-----NVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 R+ AN AQV A L + S L Y + R + ++ ++ Y++ Sbjct: 175 RNTIREDANA----AQVSAANLANETLSEQSSLAQYYFELRGQDALQELYNKTVEAYRET 230 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + L+ ++ G S + + E +++ E++ ++ + H I+ L+G A F Sbjct: 231 LRLTQTRYRTGLDSDQDVAQAETNLRTAEANAASVATTRGQYEHAIALLIGQSAGSF--- 287 Query: 248 MQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 S +P P I +GIP+ L+ RPDI E+ +A + A IG+ ++ YP +SL Sbjct: 288 ----SIPVRPLEAKPPFIPVGIPSQLLERRPDIAAAERTMAQANALIGVGQAAYYPDISL 343 Query: 306 NGSIALTHDNSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 S N N WS G IFD G ++ +++ ++ T+++TV Sbjct: 344 TASAGTQSSNISHLLNLSAGFWSLGTSATETIFDAGARRATVQQYKAQYNADVATYRQTV 403 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT- 421 LNA KEVE+ L + + + + Q A++ ++ L++ YR G + L++L + + Sbjct: 404 LNAFKEVEDYLIATRQLSEQQQRQQLAIDSAQRYQQLALSRYRTGVDTYLNVLTAQNSVF 463 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E ++S+ ++ + V L A+G G+N Sbjct: 464 SSQETEVSLRTNRMVAA-VQLIAALGGGWN 492 >gi|281177712|dbj|BAI54042.1| conserved hypothetical protein [Escherichia coli SE15] Length = 460 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|171318411|ref|ZP_02907568.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171096419|gb|EDT41319.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 503 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 108/430 (25%), Positives = 201/430 (46%), Gaps = 32/430 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + + P +F ++ + D WW F D L + V +AL QN Sbjct: 34 GCAVGPDYVRPDVAM-PQRFLGQAAVDQRHAAADADLATWWTGFGDPQLTRYVTLALAQN 92 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKT------NSTGQLD---- 121 L + QA R+ A+ + + A L PS S + R +++T NS D Sbjct: 93 LDLAQAAARVAQARAGLNAANAALLPSGEVSGQAARVYQSVETPLGRVLNSAPGFDRHGS 152 Query: 122 -------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + W++D+FG RR E++LA+ ++ A +L V ++ YI R + R Sbjct: 153 DYEADFNASWELDVFGGLRRGREAALADYQASEAGAVATRLAVAAQTADIYITIRGLQGR 212 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + + L + +G ++L + + E + + + +P LE + ++ + Sbjct: 213 LKVARHQVQTEQDLLSTISLLYGKGLAAELQVRQAEGALAQVRATVPVLEAALDTAMNAL 272 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +LG P T + P + G P +L+R RPD+ E+++A + A+I Sbjct: 273 DVMLGSQPGTHRAELLDGGDVPVAPRI---AATGTPGELLRRRPDLIVAERRVAAANARI 329 Query: 293 GIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A ++ YP SL+G I + N F G + L +FD G+I + I +A+ Sbjct: 330 GVAIAEYYPKFSLSGLIGSATTMGAGNLFTGGANQAAGVLGLRWRLFDFGRINAQIAQAK 389 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 E ++ L+A ++VENA +++ + + L V+ ++ + S Y++G Sbjct: 390 GQDAEMLAAYRLAALHATEDVENAFSALVKRDEQAAVLGGGVDSLGRARAASFAAYQKGV 449 Query: 409 YSLLDILDIE 418 SL+++L + Sbjct: 450 VSLIEVLQAD 459 >gi|161523870|ref|YP_001578882.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189351369|ref|YP_001946997.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160341299|gb|ABX14385.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189335391|dbj|BAG44461.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 507 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 38/476 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P YT+P P+ S G S N + W Sbjct: 6 ALTAIAVALLAAGCTLAPHYTRPDAPVAQAFPSGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + + I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L +AYA+ A+++++S++ Sbjct: 126 GVSQTGAPYISRVYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QAAEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ + L+G P + L + Q NL + G+P+DL+ RPD Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPPGLPLDAQ------NLLADVPAGLPSDLLTRRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 I E+ L + A IG A++ +P +SL G+ T F WSF P++ +PI Sbjct: 299 IMQAEQTLLAANANIGAARAAFFPRISLTGAFGTASPTLGGLFKAGTAAWSFAPQITMPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 359 FEGGQNIANLNLANVQKRIEIANYEKAIQSAFREVADGLAARGTYDQQIAALERNTHAQQ 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 419 RRFDLSDLRYKNGVDSYLSVLTAQTDLYTAQQALINARLARWTNLVDLYRALGGGW 474 >gi|330970196|gb|EGH70262.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 476 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 28/451 (6%) Query: 17 GCTVGPEYTKP--------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GCT+GP+Y P H PL P S+ + WW+ FND +L L+++A Sbjct: 22 GCTLGPDYQLPAVKVASQWHAPL-PHGASM--------VGLQDWWQQFNDPALATLLRMA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLD 121 + ++ +A RI A+ + AD P S A I + S LD Sbjct: 73 QADSPSLDKALARIAQARATLDGSVADRLPQVSGGVSKSRAGIRQSGVRQSGKTSGATLD 132 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR E+S L++ A++++ +++ ++ R + ++ Sbjct: 133 ASWELDLFGKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDDFVQYRGCQMLVNAYRDQ 192 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ L+ + F G T+ +A S + + + + + ++ L G Sbjct: 193 AQSQEQTARLTRVSFQAGFTAAADSSLSDASAASSNATLIKQQGECDVLLKSLVELTGSD 252 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + + + IPA+L+R RPD+ E++LA + AKIG A++D Sbjct: 253 EEQVREVLSHNPARLPRPALLDVRE-IPANLLRQRPDLASSERELAAANAKIGAAQADRL 311 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 PSLSL GS + ++ WS GP+L +P+FD GK ++ + A + T+++ Sbjct: 312 PSLSLVGSFEVGTTTGV--FSREWSLGPQLTVPLFDAGKRRAAVDSARADYDSALATYRQ 369 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A+ EVE AL ++ ++ Q A E ++ S + N++ G SLLD + R+ Sbjct: 370 TLRTAVMEVEQALVRLDAARRSQASTQRASEGYEASFQATDRNWQAGNASLLDREEARRS 429 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E++L ++ + ++ LY A+G G+ Sbjct: 430 ALSAEIELITVQQNQVRYWIALYKALGGGWQ 460 >gi|320194243|gb|EFW68875.1| Cation efflux system protein CusC precursor [Escherichia coli WV_060327] Length = 460 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +P+F+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPVFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ V NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKVQNAFKEVADALALRQTLNAQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|82702631|ref|YP_412197.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] gi|82410696|gb|ABB74805.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] Length = 503 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 118/487 (24%), Positives = 219/487 (44%), Gaps = 54/487 (11%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMP----LLPTQ--------------FSIGNSKNL 44 I I++ +++L GC VGP++ +P+ P LP + F G +L Sbjct: 8 IRGGIYAGLMLVLGGCMVGPDFVRPNPPETARYLPGESLEGAIPVKDQAQYFDAG--ADL 65 Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS- 103 I WW F LN LV + N ++ A + ++ N+L+ FP + A+ Sbjct: 66 IA----DWWRLFKSPKLNTLVTEGINNNQSLRAAQAALRQSQHNLLAGYGVFFPQADAAG 121 Query: 104 --ISHRFIP-----------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQV 149 + RF NL T ST + +D+FG QRR +ES A D V Sbjct: 122 SAVRQRFSAARFGGSTSATFNLFTLST---TVTYALDVFGGQRRAVESLRAQRDFQRYTV 178 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 L + ++ + I + +I +++ L ++ IE++H + G +S V L+ Sbjct: 179 LATYLTLTGNIVNTVIARAAYDAQIEATKELIALQREQIEITHAQIRAGTVPYISGVTLQ 238 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGI 267 ++ S+E+ +P LE+ H + TL+ Y E L + +L +P + + + Sbjct: 239 TQLASLEATLPALEQGRGQAEHLLDTLMNYAPGEGLTAQISLA-----DLSLPKDLPVTL 293 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHW 324 P+ L+R RPDI E ++ A IG+A +++ PS +L+G+ N F W Sbjct: 294 PSTLVRQRPDILAAEAQVHQFTANIGVATANMLPSFTLSGTYGQNARNLADVFMSSGNFW 353 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV- 383 S G PIF G + + A + + +++T LNA+ ++ + L ++ D + + Sbjct: 354 SAGAAFVAPIFHGGTLWQQRKAAIDAYDQALANYRQTALNALGQIADLLLALEHDAETLQ 413 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 ++LQH ++ +++ L IN++ G + L +L + ++ Q + L+ Sbjct: 414 SQLQH-LDSASEALRLVRINHQAGLVNDLQVLITNSQYLQAKLGYIGTLGQRFQDTSGLF 472 Query: 444 IAIGSGY 450 +A+G G+ Sbjct: 473 VALGGGW 479 >gi|260853822|ref|YP_003227713.1| copper/silver efflux system protein CusC [Escherichia coli O26:H11 str. 11368] gi|257752471|dbj|BAI23973.1| copper/silver efflux system protein CusC [Escherichia coli O26:H11 str. 11368] gi|323153717|gb|EFZ39965.1| cation efflux system protein cusC [Escherichia coli EPECa14] Length = 457 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 125/461 (27%), Positives = 222/461 (48%), Gaps = 34/461 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ + AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQETRAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+ L I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSIRLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER AT + +DL+ A RQ+ + + LY A+G G Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGG 457 >gi|296272175|ref|YP_003654806.1| NodT family RND efflux system outer membrane lipoprotein [Arcobacter nitrofigilis DSM 7299] gi|296096350|gb|ADG92300.1| RND efflux system, outer membrane lipoprotein, NodT family [Arcobacter nitrofigilis DSM 7299] Length = 473 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 120/468 (25%), Positives = 247/468 (52%), Gaps = 36/468 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +FSL VLLAGC++ P+ P M P + S+ +++N ID WWE + D L+ L+ Sbjct: 7 LFSLVSVLLAGCSLSPKLQVPKMDF-PQESSLNSNENKTLIDN-TWWEKYKDKRLSLLID 64 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNS--- 116 A + N + + I+ A+ + S +D +PS S N K N+ Sbjct: 65 EAFKNNYNLQETMLNISLARAILTSSTSDRYPSLNLGADGEKTRTSANTFQNSKHNTYND 124 Query: 117 ---TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +G L +++DL+G+ R + +S A L S+YAQ D KL + S + SY E Sbjct: 125 FSLSGVLS--YEVDLWGKVREAQKASKALLISSYAQKDTVKLALASNVADSYFILISLYE 182 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ + + ++ ++++++S+ +++ G ++ L + +AE+ ++ +++S + Sbjct: 183 KLDVIQKAVNAKEESLKISNSQYSSGLITQNILFQKKAELNRVQLLENEIKQSINLQESA 242 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLADS 288 ++TL+G E +++ ++ NF L P +I +P +D++ RPDI+ E+KL + Sbjct: 243 LATLIGKSPKEIINF---KNENFAKKL--PNDIVVPSNLSSDILNKRPDIQEAEQKLIAT 297 Query: 289 VAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 ++IG+AK++ +PS+SL+G S+ LT+ P T+ S+G + +P + GK+K+N Sbjct: 298 NSQIGVAKAEYFPSISLSGMLGYESLQLTNLVG-PKSGTN-SYGGNISMPFLNWGKVKAN 355 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMI 402 ++ A+++ + + +++TV A +EV +AL + + +++V + + L + ++ Sbjct: 356 VQTAKTNKELAILAYRQTVQLAFQEVYDALNTRHSLSERLVQQTNYEKNLE-EIYKIAQK 414 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G +++ D + ++D K+ L S + +Y ++G G+ Sbjct: 415 QYKNGYTDYINLKDAQYDFLISQLDTITTKQALLSSGLTVYKSLGGGW 462 >gi|221197906|ref|ZP_03570952.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD2M] gi|221204536|ref|ZP_03577553.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD2] gi|221175393|gb|EEE07823.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD2] gi|221181838|gb|EEE14239.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD2M] Length = 487 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 115/464 (24%), Positives = 223/464 (48%), Gaps = 37/464 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTL---KWWESFNDTSLNKLVK 66 GC++ P Y +P P+ P+ ++ G S ++ D W F +L+ + Sbjct: 26 GCSLAPRYERPAAPV-PSAYTNGADATHDAPSASVPGADAALLDDWRSYFTAPALHAWID 84 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQLD- 121 AL N + A R++ A+ RA+ PS AS ++ ++ P L+ ++ L Sbjct: 85 AALANNRDLRIAAGRLDEARAMYGVQRAERMPSIDASTAYERTRQYDPVLRESAVSGLYR 144 Query: 122 -----SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E+ Sbjct: 145 AGVGISAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVANAYVAERALNEQR 203 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A + LD ++ L+ ++ G + + L E + + + L++ V + Sbjct: 204 ALAERTLDARERIAALTQRRYAAGTSDAIELRSAEMLVAAARASHAALQREHAQAVRALQ 263 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G +F ++ P+ G P+DL+ RPDIR E +L + A+IG Sbjct: 264 LLAG----DFAREVRDDDTALDALTIAPVAPGAPSDLLERRPDIRQAESRLKAAHAQIGA 319 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P ++L GS++ + F + W+F P++ LPIF G+ ++N+ A + Sbjct: 320 ARAAFFPRIALTTDYGSVSDAFSSLFAAGTSVWTFAPRITLPIFAGGRNRANLDVANARR 379 Query: 352 QEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++TV A +EV +A + + E + + HA + + L+ Y G Sbjct: 380 HVAVAEYEKTVQVAFREVADAFAARDWIERQLAAQRDVHAAD--DARLKLAERRYAGGVA 437 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGYNP 452 + L++LD +R+T + +L I RQL + + LY A+G G+ P Sbjct: 438 TYLELLDAQRSTYESGQEL-IRLRQLRLANAIALYRALGGGWTP 480 >gi|238023621|ref|YP_002907853.1| outer membrane protein [Burkholderia glumae BGR1] gi|237878286|gb|ACR30618.1| Outer membrane protein [Burkholderia glumae BGR1] Length = 528 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 212/475 (44%), Gaps = 37/475 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWE 54 AI + + GCT+ P YT+P P+ + G S N + W E Sbjct: 21 AIAAAVLCTTTGCTLAPHYTRPDAPVAQAYPADGVYAAQPGAAGTRSANGQPATAIGWRE 80 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------------SS 100 F D L +L++IAL+ N + A I A++ RA L P SS Sbjct: 81 FFVDPRLQRLIEIALKNNRDLRVAVLNIEASRAQYQITRAGLLPTLEATGTGNRQRVPSS 140 Query: 101 YASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVIS 158 A+I R NL T L + W++DLFG+ + + + +LA L ++YA+ +++++S Sbjct: 141 LAAIPGR---NLTTTYNVGLSASWELDLFGRVQSLKDQALAQYLATSYAR-QATEISLVS 196 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ E + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 197 QVADQYLTLLSTDELLKVTENTLKNAQASYDLTKLQFDNGTGSELDLRQAQTVVEQALAN 256 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 257 QQAQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDV 313 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 E+ L + A IG A++ +P +SL G+ T D F WSF P+L LPIF Sbjct: 314 MQAEQMLKAANANIGAARAAFFPRISLTGAFGTASPTLDGLFKAGTAAWSFAPQLTLPIF 373 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 374 AGGQNIANLDLANVQKRIEISNYEKAIQSAFREVSDGLAARGTYDQEIAALERNEHAQQR 433 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + YR G S L +L + L A+ + V LY A+G G+ Sbjct: 434 RFELSNLRYRNGVDSYLSVLTAQTDLYSARQSLINARLARWTNLVALYRALGGGW 488 >gi|221212959|ref|ZP_03585935.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD1] gi|221167172|gb|EED99642.1| outer membrane efflux protein OprA [Burkholderia multivorans CGD1] Length = 487 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 115/464 (24%), Positives = 223/464 (48%), Gaps = 37/464 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTL---KWWESFNDTSLNKLVK 66 GC++ P Y +P P+ P+ ++ G S ++ D W F +L+ + Sbjct: 26 GCSLAPRYERPAAPV-PSAYTNGADATHDAPSASVPGADAALLDDWRSYFTAPALHAWID 84 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQLD- 121 AL N + A R++ A+ RA+ PS AS ++ ++ P L+ ++ L Sbjct: 85 AALANNRDLRIAAGRLDEARAMYGVQRAERMPSIDASTAYERTRQYDPVLRESAVSGLYR 144 Query: 122 -----SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E+ Sbjct: 145 AGVGISAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVANAYVAERALNEQR 203 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A + LD ++ L+ ++ G + + L E + + + L++ V + Sbjct: 204 ALAERTLDARERIAALTQRRYAAGTSDAIELRSAEMLVAAARASHAALQREHAQAVRALQ 263 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G +F ++ P+ G P+DL+ RPDIR E +L + A+IG Sbjct: 264 LLAG----DFAREVRDDDTALDALTIAPVAPGAPSDLLERRPDIRQAESRLKAAHAQIGA 319 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P ++L GS++ + F + W+F P++ LPIF G+ ++N+ A + Sbjct: 320 ARAAFFPRIALTTDYGSVSDAFSSLFAAGTSVWTFAPRITLPIFAGGRNRANLDVANARR 379 Query: 352 QEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++TV A +EV +A + + E + + HA + + L+ Y G Sbjct: 380 HVAVAEYEKTVQVAFREVADAFAARDWIERQLAAQRDVHAAD--DARLKLAERRYAGGVA 437 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGYNP 452 + L++LD +R+T + +L I RQL + + LY A+G G+ P Sbjct: 438 TYLELLDAQRSTYESGQEL-IRLRQLRLANAIALYRALGGGWTP 480 >gi|172061568|ref|YP_001809220.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171994085|gb|ACB65004.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 507 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/473 (24%), Positives = 215/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALLATGCTMAPHYKRPDAPVAQAYPADGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + A I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVAVLNIEAARAQYQITRAGLFPTLDGTGTGSIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSQTGAPYISRAYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ S+ Sbjct: 185 ADQYLTLLSTDDLLKVTENTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALSNQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P++ +PIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPRISLTGAFGTGSPTLGGLFKAGTAAWSFAPQITMPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + LQ ++ Sbjct: 362 GQNIANLNLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALQRNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYTAQQSLINARLARWTNLVDLYRALGGGW 474 >gi|327482633|gb|AEA85943.1| outer membrane protein OprM precursor [Pseudomonas stutzeri DSM 4166] Length = 473 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 107/460 (23%), Positives = 214/460 (46%), Gaps = 36/460 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVKIALQQN 72 GC++ PEY +P P+ P + G + + + + L W E F D +L +L+++AL+ N Sbjct: 16 GCSLIPEYQRPDAPV-PADWPQGEAYSKASPEARAQALGWREFFRDPALQQLIEVALENN 74 Query: 73 LTILQATERINAAKENILSVRADLFPSSYAS-----------ISHRFIPNLKTNSTGQLD 121 + A ++A + RAD+ P+ A ++ P + + + Sbjct: 75 RDLRVAALNVDAYRALYRVQRADVLPAVSADAAGTRSRTPGDLNMSGEPAISSQYSATFG 134 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DLFG+ R + + +L ++ A ++++I+ + +++ + + + + Sbjct: 135 VSWELDLFGRLRSLRDQALEQYFASEAAQRSTQISLIASVANAWLTLQADQALLQVTRDT 194 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y++++ L+ F G S L L + + + S I + + + ++ LLG Sbjct: 195 LKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYTRLVAQDRNALTLLLGQS 254 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ E L Q + + +G+P+DL++ RPDI E +L A IG Sbjct: 255 LPAGLPSGEGLERTQLAT----------LPVGLPSDLLQQRPDILQAEYQLRAVNASIGA 304 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL G+ F G + +WSF P + +PIF+ G++++N+ A+ S Sbjct: 305 ARAAFFPRISLTGAAGTASSELSGLFDGGSGYWSFSPSISVPIFNAGQLRANLDYAQISK 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q +++ + A +EV + L + + V + ++ + +L+ YR G S Sbjct: 365 NIQVAQYEQAIQTAFREVADGLAAQATYVRQVQAQRDLLQTSEDYYNLAERRYRTGVDSY 424 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R V+ L + S V+L+ A+G G+ Sbjct: 425 LTVLDAQRQLFSVQQQLISDRLAQLTSEVNLFKALGGGWQ 464 >gi|30249100|ref|NP_841170.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30138717|emb|CAD85022.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 470 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 226/464 (48%), Gaps = 27/464 (5%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++ S ++LL+GC++ PEY++P PL P ++ + N ++ W + F D L L Sbjct: 12 KSAVSALVLLLSGCSLIPEYSRPPAPL-PASYT-ADDTNAMDAAPESWQQYFTDPVLQNL 69 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD 121 + IAL+QN + A RI A+ R+ P+ A+ S+ R I T +D Sbjct: 70 INIALEQNRDLRIAALRIEEARAQYDIQRSAKLPTIDATGSYDRSRLI--FAKGETFDVD 127 Query: 122 --------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 S+++ID FG+ + + E+ L + + A+ ++I+++ +Y+D R E Sbjct: 128 MYRVGIGISNFEIDFFGRIKSLSEAVLEDYLATREAQQTARTSLIAEVAAAYVDERALSE 187 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R +A + L + + +F G + + L + +++S + + L++ ++ Sbjct: 188 RQLLAEKTLAAREASYTRIRRRFDAGIDTAIDLKAAKMQMESARASVSALDREHTRAINT 247 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G + + + PI G+P+DL+ RPDIR E KL + A I Sbjct: 248 LLLLMGDQSVTLPGGIAA----LDTLAFSPIPAGLPSDLLERRPDIRAAEHKLKAANANI 303 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G A++ L+P L L +I L +++ G N W+F P++ PIF + ++N+ + Sbjct: 304 GAARAALFPRLQLTTNIGLVNEHFTKLLSNGINA-WAFTPQIIFPIFTHKRNQANLNVSR 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +++ + A +EV + L + + +K + +A + ++ + L Y +G Sbjct: 363 ARMEIAVAEYEKAIQTAFREVADTLLAREQIEKQINAQSNATDADRERLKLVTRRYEKGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKS-YVDLYIAIGSGYN 451 + L++LD +R+ E L + RQL+ S ++L+ A+G ++ Sbjct: 423 ANYLELLDAQRSLFDSEQAL-VQLRQLSLSNAINLFKALGGEWS 465 >gi|332284300|ref|YP_004416211.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pusillimonas sp. T7-7] gi|330428253|gb|AEC19587.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pusillimonas sp. T7-7] Length = 475 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 109/462 (23%), Positives = 210/462 (45%), Gaps = 32/462 (6%) Query: 13 VLLAGCTVGPEYTKPHMPL----LPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKI 67 +LL C++ P+Y +P +P P + G S+ L + + W F D +L KL+ + Sbjct: 10 MLLQACSLTPKYERPALPAETAAWPQGEAYGESQKLGMAAADISWQSFFQDPALKKLIAV 69 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNSTGQLDSDW 124 AL N + A ++A + R+ LFPS A+ R +L + + S + Sbjct: 70 ALDSNRDLRVAALNVDAYRAQYRIQRSALFPSLDAAGNGARQRLPADLSPSGAAGISSQY 129 Query: 125 --------KIDLFGQRRH-----IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++D FG+ R+ +E LA ++ + +++++ + +Y+ + + Sbjct: 130 DVGAAMAFELDFFGRIRNMNQQALEEYLATEEAKRS----VHISLVANVAQAYLTWQADQ 185 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + +A + L ++ + L F G S L + + + + + + ++V+ Sbjct: 186 ALLEVAQRTLQTNERTLSLIQSSFDAGVASALEVRQARTTVNEARAYVQRYTRQVAVDVN 245 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LLG P L Q ++ I +G+P+DL++ RPDI E +L + A Sbjct: 246 GLRMLLGGP----LPTDMPQGLKLDSQVFAEIPVGLPSDLLQRRPDILAAEHRLIGANAN 301 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS F G + W+F P + +PIF+ G++ +N+ AE Sbjct: 302 IGAARAAFFPRISLTGSAGTASSQMSGLFEGGSGTWAFMPSISMPIFNAGRLGANLDYAE 361 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + ++ T+ NA +EV ++L + K + + VE + L+ Y +G Sbjct: 362 IQSDIRVAQYERTIQNAFREVSDSLAARGTYGKQLEAQRELVENTSEYFKLAQQRYDEGV 421 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L++LD +R + + S +DLY A+G G+ Sbjct: 422 DSYLNVLDAQRLLFTSQQQYIQDRLAQLNSEIDLYKALGGGW 463 >gi|197120966|ref|YP_002132917.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter sp. K] gi|196170815|gb|ACG71788.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter sp. K] Length = 501 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 213/464 (45%), Gaps = 47/464 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GCT+ P Y +P P+ L W + F D L ++ AL++N + Sbjct: 19 GCTLAPRYQRPAAPVAAEFAGGAEPAAGPAAADLGWRDVFQDPGLQAVIDQALRENRDLR 78 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLK------------TNSTGQLDSDW 124 A + A+ R+ L P+ A+ S K T S G + + Sbjct: 79 VAALNVELARAQYGIQRSYLLPTVGATGSGSRARTAKDLSFTGEPSVGNTFSAGVGLTSF 138 Query: 125 KIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +IDLFG+ R + E LA ++ + A L ++S++ Y+ +R + ++++A Q Sbjct: 139 EIDLFGRVRSLRNQALEQYLATEEAHRS----AHLALVSEVAVQYLASRALQSQVALAEQ 194 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L +++ +L+ F G TS+L EA++++ ++ + + + L G Sbjct: 195 TLQTVQQSYDLAKRTFEAGRTSELDFRTAEAQVETARVNLSAYRQQLAQAENALVLLAGG 254 Query: 240 PATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + L +++Q P +P G+P+DL++ RPDI E +L + A IG A+ Sbjct: 255 PLPKDLPAATPLEQQP----PVAELPA--GLPSDLLQRRPDILSAEHQLKAANASIGAAR 308 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL S+ N F + W+F P++ LPIF G+ K+N+ A Q Sbjct: 309 AAFFPSISLTASVGTASTELSNLFTVGSGTWAFSPRIDLPIFTGGRNKANLDAANVRKQI 368 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++++ + A +EV +AL + + + VE ++ +S + YR+G S L+ Sbjct: 369 EIASYEKAIQAAFREVADALVARGRLDEQLEAQTRRVEAEQRRYDISELRYRKGVDSYLN 428 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSY-------VDLYIAIGSGY 450 +L +R DL A++QL ++ + LY A+G G+ Sbjct: 429 VLTAQR-------DLYGAQQQLIQTRLARFSNSIGLYRALGGGW 465 >gi|94496148|ref|ZP_01302726.1| probable outer membrane efflux protein [Sphingomonas sp. SKA58] gi|94424327|gb|EAT09350.1| probable outer membrane efflux protein [Sphingomonas sp. SKA58] Length = 487 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/449 (24%), Positives = 210/449 (46%), Gaps = 21/449 (4%) Query: 21 GPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL-KWWESFNDTSLNKLVKIALQQNLT 74 GP+Y P P F N +WW + D L+ LV+ AL N Sbjct: 29 GPDYRYPQGLVATAPTARGDFHSAQGARFSNAPLPDQWWRLYADRQLDALVEEALAANAD 88 Query: 75 ILQA---TERINA------AKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 + QA ER A A + + + S S + +P + G L + + Sbjct: 89 LKQAQANVERAQAVLREAEAGRQVTTAISGGETLSRPSGVAQHLPGSVSYDLG-LSAAYP 147 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL G+ R IE+S A++++ A D +++V + +Y +++ +++ L Sbjct: 148 LDLNGRIARGIEASAADVEAVTAARDYVRVSVAAATAQAYAQVCAANYSLAVNRKVVALQ 207 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ ++ + G + + + +A +++ E+ +P + ++ ++TLLG P ++ Sbjct: 208 RQTLDATRRLAKGGRGTAFDVSRAQAAVETSEAALPAFAAQRQNGLYLLATLLGRPPADY 267 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + ++ P L PI +G A LIR RPDIR E+ +A A++G+A + LYP +S Sbjct: 268 PRAIANCAD--LPVLRQPIPVGDGAALIRRRPDIRQAERTIAGDTARLGVAMAQLYPQVS 325 Query: 305 LNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 + GS+ L+ G + + F GP + ++ I++ I +A++ + + +V Sbjct: 326 IGGSVGLSGPLKDFGTGSAFGFSLGPLISWTFPNRPVIRARIAQADAQIRADLAGFDASV 385 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A+++ E+AL + D + L A E S + + +R GR L +LD +R+ A Sbjct: 386 LEALRQTESALETYRRDAERAAALDRARESAGVSAAQAGKLFRFGRGDFLSLLDAQRSQA 445 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 EV + A+ QL + + L++A+G G+ Sbjct: 446 SAEVTAASARTQLVQDQIALFLALGGGWG 474 >gi|294012028|ref|YP_003545488.1| putative outer membrane protein [Sphingobium japonicum UT26S] gi|292675358|dbj|BAI96876.1| putative outer membrane protein [Sphingobium japonicum UT26S] Length = 469 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 119/461 (25%), Positives = 216/461 (46%), Gaps = 44/461 (9%) Query: 18 CTVGPEYTKPHMPLLPTQ-----FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C + P Y +P +P+ + G + ++ DT W + F D L ++++ +L N Sbjct: 22 CDMAPRYVRPALPVAGASPQGPAYPAGQGQAIVPADT-GWRDFFVDPRLARVIETSLAHN 80 Query: 73 LTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD--------S 122 + A + A+ RAD+FP S+ S +++ P TG+ D S Sbjct: 81 RDLRVALANVEQARAQYRVRRADIFPTLSANGSATYQDTP-FSQVGTGRTDIYSASVGVS 139 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFKERISIAHQ 179 W+IDLFG+ R++ S A + +A V+ A+ +I+++ +++ +ER+ IA Sbjct: 140 AWEIDLFGRLRNL--SRAAQEQYFASVENRNAAQTALIAEVANAWLTMAADQERLRIARD 197 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + + ++L+ +F +G S+L + + + SDI + + ++ L G Sbjct: 198 LEKAFGQTLDLTRARFAKGIASELEVRQAQTSHDQARSDIAEATTLVVQDQNALNLLAGA 257 Query: 240 P-ATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAKIGI 294 A E L + + + ++ G+PADL + RPDI E +L + A IG Sbjct: 258 TVAGEDLPAAMPEGD-------VTLS-GLPADLPSTALLRRPDIMAAEHQLLAANANIGA 309 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P++SL G+++L N F + WS P LPIFD G+ + N+R A ++ Sbjct: 310 ARAAFFPNISLTAAFGTLSLGLSNLFKSGSDTWSVAPSASLPIFDFGRNRGNLRYARATY 369 Query: 352 QEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 T++++V +EV +AL ++ + + T L+ A + S LS +R G Sbjct: 370 DAMVATYEKSVQTGFREVADALARRGTMTQQLEAQTSLRDAARV---SYRLSEARFRAGI 426 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L LD +R E L + A + V+LY A+G G Sbjct: 427 DPFLTTLDAQRTLYNAERSLLATRLSRAANMVELYRAMGGG 467 >gi|297538248|ref|YP_003674017.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera sp. 301] gi|297257595|gb|ADI29440.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera sp. 301] Length = 497 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 22/459 (4%) Query: 7 IFSLFIVLLAGCTV----GPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDT 59 + ++ L GC + PE K +P + +S +L N WW+ FND Sbjct: 30 CLTSLLLTLNGCALLNPSHPELAKVEVPAKWSADEAVAASSSTSLNN-----WWQRFNDP 84 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTN 115 L LV+ +LQ N ++ A + A+ A L P S+ A S + N Sbjct: 85 LLVNLVQQSLQSNTSVNSAKSALQEARALRDVAAAALLPTLDASASAGRSKSGNNSAVNN 144 Query: 116 STGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + LD+ W++D+FG R + +S A ++ A + ++++ +++ YI R+ + R+ Sbjct: 145 FSAGLDASWELDIFGANRSGLNASEATAQASEASLGDVQVSIAAEVALDYISLRNAQARL 204 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +IA+ L + ++++ + G S L + + + IP L+ S H ++ Sbjct: 205 AIANSNLTSQLETLQITEWRTQAGLVSSLDAEQARVSAEQTRAIIPPLQTSIAQMSHALA 264 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G P L Q + N P + + PA+ +R R D+R E ++ +AK+ Sbjct: 265 VLTGQPPAALLQ--QLSTANPVPQAANDLALNFPAETLRQRADVRAAEYRVTADLAKLAQ 322 Query: 295 AKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A + P+ SL+GS+ ALT + G + S + +P+FD G ++ +R E+ Sbjct: 323 ADAARLPNFSLSGSLGLSALTLGSLTSGSSVVSSLLANVAMPLFDGGSRRAKVRAQEAVL 382 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ TVL A++EVE+AL ++ D + V++L+ A E + ++ Y G Sbjct: 383 AQTRLAYKATVLTALQEVEDALVALRGDIQRVSRLKLASEAASNAALMARQRYDSGLSDF 442 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+ +R+ + L+ A ++ +V LY A+G G+ Sbjct: 443 QAVLETQRSLLSTQDSLASANADVSSDHVRLYKALGGGW 481 >gi|163858505|ref|YP_001632803.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163262233|emb|CAP44535.1| probable outer membrane efflux protein [Bordetella petrii] Length = 487 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 118/471 (25%), Positives = 218/471 (46%), Gaps = 33/471 (7%) Query: 6 AIFSLFIVLLAGC-TVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ L +LAGC ++ PEY +P P+ P ++ + +D L W F D L Sbjct: 9 ALAVLTSSVLAGCVSLAPEYQRPAAPIAQQWPADSAVDATHVAAPVD-LSWQTLFADPKL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG 118 + V +AL+ N + +A I A+ RADL P A +S R ++ + T Sbjct: 68 RQTVDLALENNRDLRKAVLNIERARALYRIQRADLLPEVSAGVSGNSGRTPASVSSTGTA 127 Query: 119 --------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ W++DLFG+ R + + +L + + A +L +IS++ +Y+ Sbjct: 128 VTSHSYRADLNIGWELDLFGRVRSLSDQALQDYFATEAAQYATRLGLISEVSTTYLTLAA 187 Query: 170 FKERISIAHQIL----DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E++++A + L D Y +L + G S L+L + E+E+++ L+ S Sbjct: 188 DREQLALAEETLRSRQDAYDMQRQLRDI----GNASDLALRQAESELEAARDQALALQAS 243 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKK 284 + + + L+G P L + + L + + G+P+DL++ RPDI E + Sbjct: 244 VATDRNALELLVGAP----LPADGQPDRPLESMLAVQDLPAGLPSDLLQRRPDILAAEYR 299 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +PS+SL G I D N F G W+F P++ +PIF G+++ Sbjct: 300 LQGANANIGAARAAFFPSISLTGGIGRASDSLSNLFDGGTRAWNFLPQISVPIFSGGRLR 359 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A+ ++ + A +EV +AL + + + V+ ++ +L Sbjct: 360 ANLAVAKVDRDLAVADYEHAIQGAFREVADALAIGSRLDGRLDAQKRRVDAASEAYALVQ 419 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G S L++LD +R + + + + + LY A+G + P Sbjct: 420 RRYDNGVSSYLEVLDAQRTLYAAQQNWITTRLARQSNVITLYKALGGDFAP 470 >gi|328469367|gb|EGF40313.1| putative outer membrane protein [Vibrio parahaemolyticus 10329] Length = 546 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 243/489 (49%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL + L A TVGP+Y P LP+ +S+ +WW+ FND +LN Sbjct: 11 AILSL-LGLSACTTVGPDYVHPPQAPLPSDWSVEKAAKDTQQSEQQLQQWWQQFNDPTLN 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG 118 +LV++A +QNL I A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 70 RLVELANEQNLDIEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAA 128 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 129 LSFDAAWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ L Sbjct: 189 SRRNIEIQERVVHITQVQFDSGNVTELDVQQAKNQLYTTKAAQPSLEVAMKQSRTALALL 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADL 271 LG E +Q Q Y +P ++ + A+L Sbjct: 249 LGVLPEEVEKLLQSDGLTQQIADYEAQFKSTGRKSALSGTDERSIVPRPPLLDTQVDANL 308 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 309 VMRRPDLQVSEMQARTQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 366 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 367 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 426 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A + Sbjct: 427 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYAQIKGNVANQVIA 483 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 484 LYKALGGGW 492 >gi|167752130|ref|ZP_02424257.1| hypothetical protein ALIPUT_00372 [Alistipes putredinis DSM 17216] gi|167660371|gb|EDS04501.1| hypothetical protein ALIPUT_00372 [Alistipes putredinis DSM 17216] Length = 454 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/422 (27%), Positives = 210/422 (49%), Gaps = 35/422 (8%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 WWE F D++LN+LV+ AL+ N + QA RI A+ NI RA PS ++S + Sbjct: 47 FAWWEIFGDSTLNRLVEHALENNRNLAQAASRIFEARANIAVARAPFLPSVGLNLSAQGN 106 Query: 110 PNLKTNSTGQLDSD----WKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 T +T Q + W++ LFG R +++L + + Y V L++ +++ Sbjct: 107 YTEPTGTTQQYTIEPSISWEVPLFGTLRSANRAAKAALYSSEWGYRGV---MLSLTAEVA 163 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY + + IA Q L +++ L G ++ ++L + + + E+DIP Sbjct: 164 TSYFTVLQYTRDLRIARQSYVLRRESAALVDSLARYGMSNGVALQQAMSLVYQAEADIPQ 223 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQS--NNFQPNLYIPINIGIPADLIRNRPDIR 279 +++ + + LLG + F + +N+Q + I +G+P++L+ RPDI Sbjct: 224 YQRAVEQSRLALCVLLGENPSYFGDETFDDALLDNYQ---VMDIPVGLPSELLERRPDIM 280 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + ++ A +G+A+S +PS++L G+ ++ + + G++ WS L PIF+ Sbjct: 281 EASFNMDEAAANVGLARSKRFPSITLTGAGGIVSSSIEGISDGHSWAWSAVGSLVQPIFN 340 Query: 337 KGKIKSNIRRAESSAQEQY----ITWQETVLNAIKEVENALTSI----NEDKKIVTKLQH 388 GK+K R E A+E+Y ++ETVL A+ +VE +L I ++ + L+ Sbjct: 341 FGKLK----RQEQVARERYYQSVFAYEETVLEALGDVEKSLLDIATYRSQAENYARLLRA 396 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E+ + SL YR G + LD++D ER + +++ Q +YV+L+ A+G Sbjct: 397 NIEIATMTNSL----YRNGMSAYLDVIDAERNMYQSQMEYVNLVAQQYINYVNLFKALGG 452 Query: 449 GY 450 G+ Sbjct: 453 GW 454 >gi|161524787|ref|YP_001579799.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189350459|ref|YP_001946087.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160342216|gb|ABX15302.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189334481|dbj|BAG43551.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 487 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 221/467 (47%), Gaps = 43/467 (9%) Query: 17 GCTVGPEYTKPHMPL-------------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 GC++ P Y +P P+ P+ F+ L++ W F +L+ Sbjct: 26 GCSLAPRYERPAAPVPSAYTNGVDATHDAPSAFAPRADAALLD----DWRSYFTAPALHA 81 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQ 119 + AL N + A R++ A+ RA+ PS AS + ++ P L+ ++ Sbjct: 82 WIDAALANNRDLRIAAGRLDEARAMYGVQRAERMPSIDASTGYERTRQYDPVLRESAVSG 141 Query: 120 LD------SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 L S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R Sbjct: 142 LYRAGVGISAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVANAYVAERALN 200 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+ ++A + LD ++ L+ ++ G + + L E + + + L++ V Sbjct: 201 EQRALAERTLDARERIAALTQRRYAAGTSDAIELRSAEMLVAAARASHAALQREHAQAVR 260 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L G +F ++ P+ G P+DL+ RPDIR E +L + A+ Sbjct: 261 ALQLLAG----DFARDVRDDDTALDALTIAPVAPGAPSDLLERRPDIRQAESRLKAAHAQ 316 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P ++L GS++ + F + W+F P++ LPIF G+ ++N+ A Sbjct: 317 IGAARAAFFPRIALTTDYGSVSDAFSSLFAAGTSVWTFAPRITLPIFAGGRNRANLDVAN 376 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +++TV A +EV +A T+ + E + + HA + + L+ Y Sbjct: 377 ARRHIAVAEYEKTVQVAFREVADAFTARDWIERQLAAQRDVHAAD--DARLKLAERRYAG 434 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGYNP 452 G + L++LD +R+T + +L I RQL + + LY A+G G+ P Sbjct: 435 GVATYLELLDAQRSTYESGQEL-IRLRQLRLANAIALYRALGGGWTP 480 >gi|225873875|ref|YP_002755334.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] gi|225793969|gb|ACO34059.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] Length = 481 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 130/486 (26%), Positives = 224/486 (46%), Gaps = 50/486 (10%) Query: 4 LRAIFSLFIVLLA----GCTVGPEYTKPHMPLLP--TQFSI----GNSKNLINIDTL--- 50 +R S+ LA GCTVGP+Y +P P+ P +Q S G ++ D Sbjct: 1 MRRTLSITCCALALAATGCTVGPQYHRPSAPVPPAWSQSSAPPPAGTWQHAKPSDAALRG 60 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------ 98 WW+ + D LN L N T+ A ++ AA+E + R+ FP Sbjct: 61 DWWKLYGDRELNALEARVSVSNQTLQAAVDQYLAAREQVQEARSQYFPTLTAGPSISRTR 120 Query: 99 -SSYASISHRFIPNLKTNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 S+ A SH + L+ N+ Q + W+ D FG+ RR +E++ AN ++ A+ +L+ Sbjct: 121 SSNNAPNSHAALSQLQYNTYVLQGQASWQPDFFGRVRRSVEAARANAQASAAEAANVELS 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++L Y + R + I ++ L Y+ + L+ ++F G ++ + + +++S Sbjct: 181 LQAELALDYFEMRGLDLQQQILNRTLKTYQDYLSLTEIRFHGGVATESDVALAQTQLEST 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADL 271 ++ + + H I+TLLG PA++F + P P I G+P+ L Sbjct: 241 KTQAIDIGVARSQYEHAIATLLGVPASQF---------HLPPAPLSPGLPQIPAGVPSQL 291 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSF 326 + RPDI E+ + A+IGIA S YP ++L GS + + PG + WS Sbjct: 292 LERRPDIAAAERSADAANAQIGIAISAYYPDITLTGSGGF--EGAEPGTWIQGPSELWSL 349 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G +FD G+ + R+A +++TVL A +EVE+ L+++ ++ Sbjct: 350 GASAMELLFDGGQRHALTRQARDEYAASVANYRQTVLQAFQEVEDNLSALRILQQESVTQ 409 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIA 445 +AV + S+ +S Y G + L++L + A E I RQ A S V L A Sbjct: 410 ANAVAAARHSLQVSTHRYEGGVTTYLEVLTAQSAQLSNERTQADITTRQFAAS-VQLIEA 468 Query: 446 IGSGYN 451 +G G++ Sbjct: 469 LGGGWS 474 >gi|115352705|ref|YP_774544.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115282693|gb|ABI88210.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 507 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/473 (24%), Positives = 215/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALLATGCTMAPHYKRPDAPVAQAYPADGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + A I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVAVLNIEAARAQYQITRAGLFPTLDGTGTGTIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSQTGAPYISRAYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ S+ Sbjct: 185 ADQYLTLLSTDDLLKVTENTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALSNQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P++ +PIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPRISLTGAFGTGSPTLGGLFKAGTAAWSFAPQITMPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + LQ ++ Sbjct: 362 GQNIANLNLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALQRNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYTAQQTLINARLARWTNLVDLYRALGGGW 474 >gi|258690876|gb|ACV88183.1| PcoA [Pseudomonas corrugata] Length = 475 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/457 (23%), Positives = 220/457 (48%), Gaps = 20/457 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + + +L+GC +GP+Y P +P+ Q + + ++ + WW+ F+D +L +L+ Sbjct: 11 LLATLCAVLSGCVLGPDYRVPAVPVAAKWQAPLPHGASVAAL--ADWWQQFDDPALAELL 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRFIPNLKTN 115 ++A + ++ QA I A+ S AD P + S R + Sbjct: 69 RLAEADSPSMDQAWANIALARATADSDAADAMPRIDGQLSKGRGGQQTGSQRLG---GSG 125 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S+ LD+ W+IDLFG+ RR+ E++ + +++ A++++ +++ Y+ R ++ + Sbjct: 126 SSAALDAAWEIDLFGKLRRNNEAARSRVEARVDDWHDARVSLAAQVGDYYVQYRGCQKLV 185 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + ++ F G TS +A S + + + + + ++ Sbjct: 186 LAYRDQAQSQQDTARITRQSFGAGFTSSADAALADASAASSAAALVQQQSECEVLLKSLV 245 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G + + K + + IPAD++R RPD+ E++LA + A+IG+ Sbjct: 246 ALTGGDEERLIGVLGKTPAQLPEPAGLNVQQ-IPADMLRQRPDVASSERELAAANAEIGV 304 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 A++D PSLSL+G+ ++ N+ +N WS GP L +P+FD GK ++ + A++S Sbjct: 305 AQADRLPSLSLSGTFSVG--NTVGQHNRSWSLGPVLSVPLFDGGKRRAAVDGAKASYDAA 362 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++T+ ++ EVE AL ++ ++ + ++ + ++S N++ G SLLD Sbjct: 363 LAVYRQTLRTSVMEVEQALVRLDAARRRESDVERSTAGFRESFEAIDRNWQAGSVSLLDR 422 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R E++L ++ + ++ LY A+G G+ Sbjct: 423 ETARRQALTAEIELITLQQDQVRYWIALYKALGGGWQ 459 >gi|146284250|ref|YP_001174403.1| outer membrane protein OprM precursor [Pseudomonas stutzeri A1501] gi|145572455|gb|ABP81561.1| outer membrane protein OprM precursor [Pseudomonas stutzeri A1501] Length = 473 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/460 (23%), Positives = 213/460 (46%), Gaps = 36/460 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVKIALQQN 72 GC++ PEY +P P P + G + + + + L W + F D +L +L+++AL+ N Sbjct: 16 GCSLIPEYQRPDAPA-PADWPQGEAYSKASPEARAQALGWRQFFRDPALQQLIEVALENN 74 Query: 73 LTILQATERINAAKENILSVRADLFPSSYAS-----------ISHRFIPNLKTNSTGQLD 121 + A ++A + RAD+ P+ A +S P + + + Sbjct: 75 RDLRVAALNVDAYRALYRVQRADVLPAVSADGAGTRSRTPGDLSMSGEPAISSQYSATFG 134 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DLFG+ R + + +L ++ A ++++I+ + +++ + + + + Sbjct: 135 VSWELDLFGRLRSLRDQALEEFFASEAAQRSTQISLIASVANAWLTLQADQALLQVTRDT 194 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y++++ L+ F G S L L + + + S I + + + ++ LLG Sbjct: 195 LKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYTRLVAQDRNALTLLLGQS 254 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ E L Q + + +G+P+DL++ RPDI E +L A IG Sbjct: 255 LPAGLPSGEGLERTQLAT----------LPVGLPSDLLQQRPDILQAEYQLRAVNASIGA 304 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL G+ F G + +WSF P + +PIF+ G++++N+ A+ S Sbjct: 305 ARAAFFPRISLTGAAGTASSELSGLFDGGSGYWSFSPSISVPIFNAGQLRANLDYAQISK 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q +++ + A +EV + L + + V + ++ + +L+ YR G S Sbjct: 365 NIQVAQYEQAIQTAFREVADGLAAQATYVRQVQAQRDLLQTSEDYYNLAERRYRTGVDSY 424 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R V+ L + S V+L+ A+G G+ Sbjct: 425 LTVLDAQRQLFSVQQQLISDRLAQLTSEVNLFKALGGGWQ 464 >gi|170697628|ref|ZP_02888717.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170137515|gb|EDT05754.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 507 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 114/473 (24%), Positives = 215/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALLATGCTMAPHYKRPDAPVAQAYPADGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + A I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVAVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSQTGAPYISRAYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ S+ Sbjct: 185 ADQYLTLLSTDDLLKVTENTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALSNQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P++ +PIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPRISLTGAFGTGSPTLGGLFKAGTAAWSFAPQITMPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + LQ ++ Sbjct: 362 GQNIANLNLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALQRNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYTAQQTLINARLARWTNLVDLYRALGGGW 474 >gi|332970454|gb|EGK09446.1| outer membrane efflux protein OprM [Kingella kingae ATCC 23330] Length = 498 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 117/450 (26%), Positives = 215/450 (47%), Gaps = 19/450 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++L+ C + P+Y +P + L QF +S I +L W + F D L+ L+++ L+ Sbjct: 34 IVLSACNLAPKYEQPQINLPSEQFQYNSSNTQAIQAASLGWQDYFADPRLHALIELGLKN 93 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNL-KTNSTGQLDSDWKI 126 N + A + + R+ P S+ A+ SH + ++ S G S +++ Sbjct: 94 NTDLRTANLNVEQVRAQYAITRSAQLPGLDGSAGATRSHNPANGVGESYSVGLGISAFEL 153 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DL+G+ R + E++L + ++ A D L+++S + +Y + + +A + L+ Y+ Sbjct: 154 DLWGRVRNNSEAALQSYFASAASRDATHLSLVSTIAKAYFNELVATANMELADRTLNSYE 213 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + L L+ G S L L + E+ I+S +S +S + + L+ E L Sbjct: 214 ETYRLMQLRHRAGVISALELRQQESLIESAKSSYAGAVRSREQARNQLELLISQKLPEDL 273 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + F+ + G+P+DL+ NRPDI E L + A IG A++ +P +SL Sbjct: 274 PAPLPLAQQFKIQ---DLPAGLPSDLLLNRPDIIAAEHNLKQANANIGAARAAFFPRISL 330 Query: 306 NGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 SI L + N F N WSFG L +PIFD G +N+ A+ + Q+ + ++ V Sbjct: 331 TSSIGLGSNQLSNLFESANKSWSFGGSLSVPIFDWGNNSANLDAAKIAQQKTVVAYEAAV 390 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMINYRQGRYSLLDILDIER 419 +A ++V +AL + ++ Q + +K + + L+ + Y+ G S LD+LD ER Sbjct: 391 ESAFRDVADALVA---RAAFTSQYQSNLAQNKAQSERLRLTRLRYKHGVSSSLDLLDAER 447 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + + L ++ DLY +G G Sbjct: 448 SHYSSTSAVLSTQLSLLENLADLYKVLGGG 477 >gi|330882997|gb|EGH17146.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 322 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/320 (29%), Positives = 173/320 (54%), Gaps = 22/320 (6%) Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA L Sbjct: 3 WEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIARDNL- 61 Query: 183 LYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 KN + S TQ G ++L +V+ EA + ++E+ +P L+ + I+TLLG Sbjct: 62 ---KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRNRIATLLG 118 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + S + P + + IG P ++RNRPDIR E++LA S A+IG+A +D Sbjct: 119 ERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIGVATAD 175 Query: 299 LYPSLSLNGSIALTHD-NSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+P +SL+ + T S G + WS GP + FD G +++ IR A++ A+ Sbjct: 176 LFPRVSLSCFLGFTAGRGSQIGSSAAKAWSLGPSITWAAFDLGSVRAQIRSADADAEGAL 235 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ VL A++E ENA + ++ ++ + L + + + L+ + YR+G L +L Sbjct: 236 ANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTADFLVLL 295 Query: 416 DIER-------ATAKVEVDL 428 D ER + A+ E++L Sbjct: 296 DAERERLAAEDSQAQAEIEL 315 >gi|91775712|ref|YP_545468.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91709699|gb|ABE49627.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 462 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 221/458 (48%), Gaps = 30/458 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LL C++ PEY +P P+ P Q+ I +++ + T W E F D L KL+ IAL N Sbjct: 14 LLLGACSLNPEYHRPAAPV-PVQYPINADADILPLPT-SWQEYFTDPELQKLINIALANN 71 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHR-----------FIPNLKTNSTGQLD 121 + RI A+ RAD P+ A+ ++ F +L S G Sbjct: 72 RDLRMTALRIEEARAQYGIQRADRLPTLDATGTYERSKMIFAQGQTFDVDLYRASVG--I 129 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S +++D FG+ + + ++L L + AQ A+ ++I+++ SY++ R ER+++A Sbjct: 130 SGFELDFFGRVKSLTTALLEQYLATQEAQ-QTARTSLIAEVAASYVNIRALAERLALAKD 188 Query: 180 ILDLYKKNIELSHL--KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + +N+ S + + G + + L E ++++ ++ I L++ + V+ + L Sbjct: 189 TE--HARNLAYSRILRRHQAGLDNAMDLKTAEMQLETAQASIAALQREYTQAVNALQLLA 246 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + Q++ + + P+ +G+P+ L+ RPDIR E +L + A IG A++ Sbjct: 247 GQPGLA-ITVPQERLDRIA---FSPLPVGLPSTLLERRPDIRAAEHRLKAANANIGAARA 302 Query: 298 DLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +P + L ++ L +++ + + W+F P+L LPIF+ + ++N+ A + Sbjct: 303 AFFPRIQLTTNVGLVNEHLSSLFSSSSDKAWAFSPQLTLPIFNHARNRANLDLARVRKEI 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ + A EV L + + + + ++ + L+M Y +G + L+ Sbjct: 363 TVAEYEKAIQTAFSEVSIVLLDREQIEAQIASQTRIADADRERLRLAMRRYDKGVANYLE 422 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R+ + E L K+ + ++L+ +G + Sbjct: 423 LLDAQRSLFESEQQLVQLKQLSLTNSINLFKVLGGEWQ 460 >gi|256827918|ref|YP_003156646.1| NodT family RND efflux system outer membrane lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256577094|gb|ACU88230.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfomicrobium baculatum DSM 4028] Length = 472 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 121/472 (25%), Positives = 220/472 (46%), Gaps = 36/472 (7%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI--NIDTLKWWESFNDTSL 61 R I + +V L GC T+ PE +P MP+ P ++ + ID L W ++F D +L Sbjct: 3 RLILVIALVALGGCATLAPERERPAMPV-PEAWNAPAQSGPVQAGIDELGWRDAFPDPAL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL- 120 KL+ AL QN ++ QA ++ A+ RAD P+ AS N T S G L Sbjct: 62 QKLIATALGQNRSLRQAVLAMDKARAQFGIARADRVPNVDASGV-----NSNTRSPGDLR 116 Query: 121 ------DSDW---------KIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIP 162 D W ++D FG+ + +E S L+S A + A ++++S++ Sbjct: 117 GGIEGIDRQWNVGLGISSFELDFFGRVKSLEDS--ALESYLATEEARRAAHISLVSQVAR 174 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ +E +++A + L+ + ++L+ + G +++L+ + E + ++++ L Sbjct: 175 GYLTLAGDREHLALARETLESRQATLDLTLAQLAHGMSTELARHQAEEVVAVAQAEVARL 234 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 M+ + ++ L G P ++ Q ++ L + G+P++L+ RPDI E Sbjct: 235 TAQVVMDENALAVLAGVPVSDMNLPAQAINDVI---LNTAVTPGLPSELLTRRPDILEAE 291 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L + A+IG A++ +P + L G +L + F W+F P + LPIFD G+ Sbjct: 292 HRLWAAGAEIGAARAAFFPRIGLTTTAGLASLELTDLFDSAQRVWTFVPSITLPIFDAGR 351 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 K+ + A++ Q + ++ET+ NA +EV +AL + V +KS L Sbjct: 352 NKAKLEAAKAEQQIRIAQYEETIQNAFREVSDALAKNQGYEGQVQAQARRAASAEKSRLL 411 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S + D ER +L A+ + V+L+ A+G G+ Sbjct: 412 VDQRFSAGLESAFAVHDAERTLFTARQNLLDARLARKLATVELFTALGGGWQ 463 >gi|73541429|ref|YP_295949.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72118842|gb|AAZ61105.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 517 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 120/461 (26%), Positives = 219/461 (47%), Gaps = 32/461 (6%) Query: 16 AGCT-VGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GCT +GP++ P + S ++ D +WW F+D L KL+ A Sbjct: 19 GGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWWRVFDDPILEKLIAEADAN 78 Query: 72 NLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ----------L 120 N + A R+ A+ + +A +P AS ++ + ++ +T Q Sbjct: 79 NAGVRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSRQSGATVQTSRVWQFSAGF 138 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAY--AQVDIAKLNVI--SKLIPSYIDARHFKERIS 175 D W++D +G+ R IES+ D+AY +Q + + V+ ++L +Y R + R+ Sbjct: 139 DVGWELDFWGRFSRAIESA----DAAYFASQANYQDVLVLLHAQLAQTYFTLRTAEARLR 194 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + L K++ E++ F G + +L L + + + S IP LE + ++ Sbjct: 195 IARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPELEGQILHARNALAI 254 Query: 236 LLGYPAT---EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G P E L K+ P + + +PA L+ RPDIR E ++A A I Sbjct: 255 LIGRPPAPMHELLDMPDKE--GVVPLIDRAVLRDVPASLLLRRPDIRAAELQMAAQSALI 312 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESS 350 G+AK++LYPSL+L GSI + +S P GP L +FD G+I++N+R ++ Sbjct: 313 GVAKAELYPSLTLLGSIGWSA-SSLPATPNGLVLIAGPSLRWNVFDYGRIRNNVRIQDAR 371 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 Q+ +++Q++V A +E ++A + + + + L A + +S++L+ +R+G Sbjct: 372 LQQLIVSYQDSVRQAAREADDAASGLIKALEREAILAQASQSANRSLALATALFREGYSD 431 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +RA + + + + LY A+G G++ Sbjct: 432 FQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWD 472 >gi|323191208|gb|EFZ76472.1| cation efflux system protein cusC [Escherichia coli RN587/1] Length = 460 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQTLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYAALGGGW 458 >gi|238021948|ref|ZP_04602374.1| hypothetical protein GCWU000324_01853 [Kingella oralis ATCC 51147] gi|237866562|gb|EEP67604.1| hypothetical protein GCWU000324_01853 [Kingella oralis ATCC 51147] Length = 519 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 108/450 (24%), Positives = 216/450 (48%), Gaps = 21/450 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 + L+ C + P+Y KP++ L F N + +L W + F D L+ L++IAL Sbjct: 47 IALSACNLAPKYEKPNVELPSDTFKYDAQRNGEQAFQAASLGWQDYFADPRLHALIEIAL 106 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYA-SISHRFIPNLKTNSTGQLDSDWKIDL 128 + N + A + + R+ FPS A + R ++++ + G S +++DL Sbjct: 107 KNNTDLRTANLNVEQVRAQYAITRSSQFPSLGANGGASRSRGDVESYNAGLGISAFELDL 166 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 +G+ R +++L S A D L++I+ + +Y + ++ ++++ + L Y+K Sbjct: 167 WGRVRNSSQAALQQYFSTAASRDATHLSLIASVAKAYFNEQYATAAMALSEKTLASYQKT 226 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 +L+ ++ G S L L EA I++ ++ ++ + + L+ + L Sbjct: 227 YDLAKVRHKAGVISALDLRSQEAMIENAKASYAAAVRAREQARNALELLISQKIPDDLPA 286 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 S F+ + G+P+DL+ NRPDI E L + A IG+A++ +P++SL Sbjct: 287 PLALSKQFKIR---NLPAGLPSDLLLNRPDIIAAEHTLKAANANIGVARAAFFPTISLTS 343 Query: 308 SIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 ++ N F N WS+G L LPIFD G+ ++ ++ ++ ++ + ++ V Sbjct: 344 TLGFGSSQLSNLFNSSNKTWSYGGNLSLPIFDWGQRRNQLKVSKIEQEKAVVAYEAAVEG 403 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVEL-----HKKSMSLSMINYRQGRYSLLDILDIER 419 A ++V +AL + + Q+ L + + + L+ + Y+ G S LD+LD +R Sbjct: 404 AFRDVADALVA-----RAAMNTQYDSNLAQQKAYNERLRLTTLRYKHGVSSALDLLDAQR 458 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ + + + L ++ DLY A+G G Sbjct: 459 SSYSADTTVLSTQLSLLENLADLYKALGGG 488 >gi|308126136|ref|ZP_05908100.2| outer membrane efflux lipoprotein [Vibrio parahaemolyticus AQ4037] gi|308106871|gb|EFO44411.1| outer membrane efflux lipoprotein [Vibrio parahaemolyticus AQ4037] Length = 547 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 243/489 (49%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL + L A TVGP+Y P LP+ +S+ +WW+ FND +LN Sbjct: 12 AILSL-LGLSACTTVGPDYVHPPQTPLPSDWSVQKAAKDTQQSEQQLQQWWQQFNDPTLN 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG 118 +LV++A +QNL I A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 71 RLVELANEQNLDIEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAA 129 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 130 LSFDAAWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ L Sbjct: 190 SRRNIEIQERVVHITQVQFDSGNVTELDVQQAKNQLYTTKAAQPSLEVAMKQSRTALALL 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADL 271 LG E +Q Q Y +P ++ + A+L Sbjct: 250 LGVLPEEVETLLQSDGLTQQIADYEAQFKSTGRKSALSGTDERSIVPRPPLLDTQVDANL 309 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 310 VMRRPDLQVSEMQARAQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 367 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 368 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 427 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A + Sbjct: 428 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYAQIKGNVANQVIA 484 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 485 LYKALGGGW 493 >gi|116748894|ref|YP_845581.1| RND efflux system outer membrane lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116697958|gb|ABK17146.1| RND efflux system, outer membrane lipoprotein, NodT family [Syntrophobacter fumaroxidans MPOB] Length = 480 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 112/461 (24%), Positives = 212/461 (45%), Gaps = 28/461 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L + +GC +GP Y +P + P F S ++ L WW F D +L KL+ A Sbjct: 13 LLVSFASGCALGPNYKRPAVSA-PENFRSALTPAEQASLADLPWWTIFQDETLQKLITEA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQLDSD 123 L+ N + A R+ A++ R+ FP + A+ + F+ + N DS Sbjct: 72 LENNYDLRVAVTRVEQARQIAAQARSLFFPQIGYDGAVATGRNSFLTSPSPNGGQTTDSA 131 Query: 124 -------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+G+ RR E + A + ++++S + +Y + + Sbjct: 132 LLDLSVFWEVDLWGRIRRLNEEARAQFLATDEARRGVVVSLVSSVAQAYFELLELDLELE 191 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + ++ + L + G SKL E + ++ +++P LE+ + + I+ Sbjct: 192 IARRNTKSFEDTLTLFSRRLEYGVASKLETSSAEGLLGTVAANVPELERQIVIKENQINV 251 Query: 236 LLGY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 LLG P + ++S P I G+P+ L+ RPDIR E+ L + A++ Sbjct: 252 LLGRNPGPVERNADLLDQES---PPE----IPAGLPSALLERRPDIRQAEQNLRAANARV 304 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A ++ +P + L G ++ G W+ + PIF G + + R+A++ Sbjct: 305 GVAVTNFFPQIGLTTLLGKVSPELSAFSAGTANLWAVAGTMTGPIFRGGALVAEYRQAKA 364 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +E +T+++T LNA KEV NAL S + + + +V+ + +++ +S+ Y G+ Sbjct: 365 AWEEARLTYEQTALNAFKEVSNALISREKLELARAQQSRSVKAYDQAVGVSLKRYVAGKA 424 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S ++L ++ E L+ + + V LY A+G G+ Sbjct: 425 SYYEVLQNQQNLFPAETTLARTQLNQLLAVVQLYKALGGGW 465 >gi|311105895|ref|YP_003978748.1| outer membrane protein OprM 2 [Achromobacter xylosoxidans A8] gi|310760584|gb|ADP16033.1| outer membrane protein OprM 2 [Achromobacter xylosoxidans A8] Length = 488 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 219/488 (44%), Gaps = 54/488 (11%) Query: 4 LRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIG---------NSKNLINIDTLKWW 53 +R + S+ LAGC++ P Y +P P+ T + G ++ L+ D + W Sbjct: 5 MRTLLSVSLAAALAGCSLAPTYERPDAPV-DTAYPTGPSYQAAQPADAGGLLTAD-IGWR 62 Query: 54 ESFN-DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------- 99 + F D L +L++ +L N + A + AA+ RADL PS Sbjct: 63 DFFGSDPLLQQLIEQSLANNRDLRVAALNVEAARAQYRIQRADLMPSVGIAGQESAQRSP 122 Query: 100 ------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-----ESSLANLDSAYAQ 148 A+ SH + G S W++DLFG+ R + ES LA LD Sbjct: 123 ADLSPSGRATTSHSY-------QVGAAMSAWELDLFGRIRSLSDKALESYLA-LDETRTA 174 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 +L +I+++ +Y+ R +E +S+ + L + + +L+ + QG ++ L L + Sbjct: 175 T---QLTLIAEVANAYLTLRADQELLSLTRETLKSQQDSFKLTQQSYDQGLSTSLDLSQA 231 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--G 266 E +++ E ++ + + + + L+G P + + + + +P + G Sbjct: 232 EVSLRTAERNLSQYTRQAAQDRNALVLLVGQPLSPEMTAALDNAVRLDDGM-LPTTLPAG 290 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH 323 +P+DL+ RPDIR E +L + A IG A++ +P++SL GS F G + Sbjct: 291 LPSDLLARRPDIRAAEHQLKGANANIGAARAAFFPTISLTGSAGTASASLGGLFEGGSGA 350 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WSF P++ +PIF G + + + A+ Q +++++ +EV +AL + + Sbjct: 351 WSFVPQITVPIFAGGSLLAGLDLAKVQKNIQVAQYEKSIQTGFREVADALAGRGTLDEQI 410 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 Q V ++++ S +RQG L +LD +R+ + L +R + V LY Sbjct: 411 QAQQLLVAANQRAYDASDQRFRQGIDDYLSVLDSQRSLYTAQQALVDTRRARLSNLVTLY 470 Query: 444 IAIGSGYN 451 +G G+ Sbjct: 471 KVLGGGWT 478 >gi|254248191|ref|ZP_04941511.1| hypothetical protein BCPG_03018 [Burkholderia cenocepacia PC184] gi|124874692|gb|EAY64682.1| hypothetical protein BCPG_03018 [Burkholderia cenocepacia PC184] Length = 488 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 125/474 (26%), Positives = 219/474 (46%), Gaps = 53/474 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 + L+ C+ P Y P L P F +K I WW++F D L++L Sbjct: 14 VAFLSACSFAPAYHAPQTAL-PASFKEAGGWQAAKPADRIARDGWWKAFRDPVLDRLEAR 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI-----PNLKT 114 N + A R + A R+ LFP SS + R + PN+ Sbjct: 73 VAAANPDVAAAVARHDEAAALFDQARSGLFPTIGLGAQISSNRQSATRPLRGSNQPNVYG 132 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKE 172 ++T D+ +DL+G+ R+ E + D+ + D+A +L++ + L +Y + R + Sbjct: 133 DNTLDAGFDYDLDLWGKVRN-EVAAGRADAQASADDLASVRLSLQASLASAYFNLRGLDQ 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + +D Y++ + L+ + G S L + + ++ S + + + H+ Sbjct: 192 QQQLLADTIDTYQRALRLTMSRHAGGIASDLDVSRARTQLDSARASAEDVRARRALYEHS 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADS 288 I+TL G PA+ F + P+L Y+P I GIPA L++ RPD+ E+++A + Sbjct: 252 IATLTGVPASSF---------SLTPDLNPAYLPTIPAGIPATLLQRRPDVAAAERRMAAA 302 Query: 289 VAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 AKIG+ ++ +P ++L S L H P N WS GP L L +FD G+ ++ Sbjct: 303 NAKIGVVRAAFFPDITLGLVGGYQSSGLGHWLRAP--NEIWSIGPSLALTLFDGGRRQAL 360 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +A + E ++ VL+A ++VE+ L + + Q A++ ++++ LSM Sbjct: 361 TDQARAQLAENGAKYRAVVLDACQQVEDNLALAHHLGDEADREQEALDAAERTLQLSMSR 420 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIA------KRQLAKSYVDLYIAIGSGYN 451 YR G S LD++ + E+D IA +RQLA V L A+G G++ Sbjct: 421 YRDGVVSYLDVVTAQ----TTELDTKIAMLELDTRRQLAA--VGLIAALGGGWS 468 >gi|330982111|gb|EGH80214.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 476 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 42/458 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GCT+GP+Y P + + +Q+ + WW+ FND +L L+++A + ++ Sbjct: 22 GCTLGPDYQLPAVAV-ASQWHAPLPHGASMVGLQDWWQQFNDPALATLLRLAQADSPSLD 80 Query: 77 QATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLDSDWKIDLF 129 QA RI A+ + AD P S A I+ + T S LD+ W++DLF Sbjct: 81 QALARIAQARATLDGSVADRLPQVSGGVSKSRAGINQSGLHKSGTTSGATLDASWELDLF 140 Query: 130 GQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G+ RR E+S L++ A++++ +++ ++ R + ++ ++ Sbjct: 141 GKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDDFVQYRGCQMLVNAYRDQAQSQEQTA 200 Query: 189 ELSHLKFTQGATSKL--------------SLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 L+ + F G T+ +L+K ++E + + L S V + Sbjct: 201 RLTRVSFQAGFTAAADSSLSDASAAASNATLIKQQSECDVLLKSLVALTGSDEEQVREV- 259 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIG 293 LG+ QP L +++ IPADL+R RPD+ E++LA + AKIG Sbjct: 260 --LGHNPARLP----------QPAL---LDVREIPADLVRQRPDLASSERELAAANAKIG 304 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++D P LSL GS + ++ WS GP+L +P+FD GK ++ + A++ Sbjct: 305 AAQADRLPKLSLVGSFQVGTTTGV--FSRVWSLGPQLTVPLFDAGKRRAAVDSAQADYDA 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++T+ ++ EVE +L ++ ++ Q A + ++ S + N++ G SLLD Sbjct: 363 ALATYRQTLRTSVMEVEQSLVRLDAARRGQASTQQAADGYEASFEATDRNWQAGNASLLD 422 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R+ +++L ++ + ++ LY A+G G+ Sbjct: 423 REVARRSALSAQIELITVQQNQVRYWIALYKALGGGWQ 460 >gi|167738960|ref|ZP_02411734.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 392 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 29 FDASWELDLFGRVRRSVEAAGAQTQAAIEGCNDALLSLEAEVAQTYLQLRGAQALRALAV 88 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 89 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 148 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 149 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 206 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 207 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 262 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 263 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 322 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 323 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 362 >gi|28901434|ref|NP_801089.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839440|ref|ZP_01992107.1| outer membrane efflux family protein [Vibrio parahaemolyticus AQ3810] gi|308094840|ref|ZP_05892629.2| outer membrane efflux lipoprotein [Vibrio parahaemolyticus AN-5034] gi|308095350|ref|ZP_05905153.2| outer membrane efflux lipoprotein [Vibrio parahaemolyticus Peru-466] gi|308125517|ref|ZP_05775856.2| outer membrane efflux lipoprotein [Vibrio parahaemolyticus K5030] gi|28809981|dbj|BAC62922.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747029|gb|EDM58017.1| outer membrane efflux family protein [Vibrio parahaemolyticus AQ3810] gi|308085444|gb|EFO35139.1| outer membrane efflux lipoprotein [Vibrio parahaemolyticus Peru-466] gi|308091755|gb|EFO41450.1| outer membrane efflux lipoprotein [Vibrio parahaemolyticus AN-5034] gi|308112121|gb|EFO49661.1| outer membrane efflux lipoprotein [Vibrio parahaemolyticus K5030] Length = 547 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 243/489 (49%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL + L A TVGP+Y P LP+ +S+ +WW+ FND +LN Sbjct: 12 AILSL-LGLSACTTVGPDYVHPPQTPLPSDWSVQKAAKDTQQSEQQLQQWWQQFNDPTLN 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTNSTG 118 +LV++A +QNL I A RI A+ ++L + L +P + +++ ++ + N+ Sbjct: 71 RLVELANEQNLDIEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAA 129 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 130 LSFDAAWEMDIWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ P+LE + + + ++ L Sbjct: 190 SRRNIEIQERVVHITQVQFDSGNVTELDVQQAKNQLYTTKAAQPSLEVAMKQSRTALALL 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADL 271 LG E +Q Q Y +P ++ + A+L Sbjct: 250 LGVLPEEVEKLLQSDGLTQQIADYEAQFKSTGRKSALSGTDEHSIVPRPPLLDTQVDANL 309 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 310 VMRRPDLQVSEMQARAQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 367 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 368 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 427 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A + Sbjct: 428 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYAQIKGNVANQVIA 484 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 485 LYKALGGGW 493 >gi|121606435|ref|YP_983764.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120595404|gb|ABM38843.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 477 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 113/459 (24%), Positives = 212/459 (46%), Gaps = 37/459 (8%) Query: 17 GCT--VGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC P P P P ++S +S T WW+ FND L LV ALQ Sbjct: 24 GCASLTSPTTALPATPT-PAEWSTPAPYASSPASAAPLTANWWQGFNDPQLTALVTQALQ 82 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---------LD 121 + + A + A+ A L PS S S + ++ S G D Sbjct: 83 NSTDVRSAQSALLQARALRDVSAAGLGPSVSTSASAQ-----RSKSGGSQAGNSFQAGFD 137 Query: 122 SDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+ D+FG R + ++ +++++A A + A++++ ++ +YI+ R + ++ IA Sbjct: 138 ASWEPDVFGGNRSALNAAQSDVEAAVASLANAQVSLAAETAVTYIELRGLQAQLLIARGN 197 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L ++ ++++ + G S L + + A + + IP LE S +++ L G Sbjct: 198 LASQRETLQITRWRAQAGLASSLDVEQGIAASEQTGAQIPALETSIAQAASSLAVLTG-- 255 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIG-----IPADLIRNRPDIRYQEKKLADSVAKIGIA 295 E ++ N P +P G IPA+ +R RPD+R E ++ ++A++ A Sbjct: 256 --ESPGALRSALANAAP---VPQAAGDLALAIPAETLRQRPDVRAAEHRIEAALARVAQA 310 Query: 296 KSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YP ++GS+ ALT G + + + +P+FD G ++ +R +++ + Sbjct: 311 DAARYPGFQISGSLGLRALTLGTLTSGASVANALLASVSVPLFDGGAARAQVRAQQAALE 370 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 I++Q TVL+A+K+VE+AL S+ +++ + +LQ A + L+ Y G Sbjct: 371 SARISYQATVLSALKDVEDALISLQGNRERLARLQAASGAAANADLLARQRYASGLIDFR 430 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R + L + L+ +V LY A+G G+ Sbjct: 431 AVLETQRTLLSTQDSLEATRASLSADHVRLYKALGGGWT 469 >gi|325122862|gb|ADY82385.1| outer membrane efflux protein [Acinetobacter calcoaceticus PHEA-2] Length = 491 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 222/477 (46%), Gaps = 56/477 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW FND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKLEDNNWKIAQPADQQVRGEWWRVFNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N ++ A I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAISGNQSLKAAAANIQASRALRSAAQAERLPS----IGAGFGPTRQKPSPASLGLDDN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A++ A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRIASSVNAATADVQQQEALYQSVLLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L +F G S+L + + + E+ + +++ + ++ Sbjct: 195 IRQLDAEQAIYNRTIKLLGETRDLVQTRFRNGLVSELDVSRAQTELATAQTNALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG EF +Q + N I + G+P+ L+ RPDI E+ +A Sbjct: 255 ANAEHALAVLLGKTPAEFSLAVQPLTAN-----SIRLPAGLPSALLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P L L G AL +++S G WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLDLTG--ALGYESSTLGDLGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSI---AKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E LS R +A V+L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQE-QLSAQLNGTRMMAS--VNLIRALGGGWH 481 >gi|161615478|ref|YP_001589443.1| hypothetical protein SPAB_03249 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364842|gb|ABX68610.1| hypothetical protein SPAB_03249 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 496 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 112/464 (24%), Positives = 219/464 (47%), Gaps = 30/464 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 30 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 89 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 90 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVMDESEINRRYEA 149 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 150 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 205 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 206 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 265 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 266 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 324 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL GS A T S G + W F P++ LP+F G +++++ R Sbjct: 325 RIGAARAAFFPTISLTGS-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + +++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 384 AHVQKQIEIASYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 443 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G L +LD R + L + + ++LY A+G G+ Sbjct: 444 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGW 487 >gi|17548663|ref|NP_522003.1| multidrug resistance efflux pump protein [Ralstonia solanacearum GMI1000] gi|17430911|emb|CAD17593.1| probable channel-forming component of a multidrug resistance efflux pump protein [Ralstonia solanacearum GMI1000] Length = 495 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 119/459 (25%), Positives = 219/459 (47%), Gaps = 27/459 (5%) Query: 17 GCTV-----GPEYTKPHMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQ 70 GC GP P L + L +WW F D +L L A + Sbjct: 26 GCVTAPDVRGPALASPEAALRSRAAVVAGEPALAETAVPSQWWGLFGDATLIALEAEATE 85 Query: 71 QNLTILQATERI----------NAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 NL + A RI +AA++ L+ A S+ + S + T ++ Sbjct: 86 SNLDLQSAAPRIEESRARLGLADAARQPQLAADAGYTRSAISEHSPLAVLGAPTRASDTW 145 Query: 120 ---LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L++ W++DL+G+ RH ES+ ANL+++ + ++++ +++ +Y+ R + + S Sbjct: 146 LLGLEAGWELDLWGRLRHQSESAEANLEASGYGKEAVRVSIAAEVAYTYLQLRGVQAQES 205 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + ++ + G ++ A++ I++ + L ++ ++ Sbjct: 206 VAEQNRQLADGLVRMAESRERHGVATRFDAAAARADVAGIDARLSQLHHKREALMNALAL 265 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P E + + P + + +GIP++L R RPDI + +L +VA IG A Sbjct: 266 LLGKPPREL---DDRLAAAALPAMPKRLPVGIPSELARQRPDILQADARLRAAVADIGAA 322 Query: 296 KSDLYPSLSLNGSIAL-THDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++D YP +SL GS + D S G + ++FGP LYLPIF+ G++KSN+ + + + Sbjct: 323 EADFYPRISLTGSAGVQAFDFSDLGSWASRRYAFGPTLYLPIFEGGRLKSNLALSAARHR 382 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 I +Q+TVL A EV++AL + + + +LQ A++ ++ ++ ++ Y+QG Sbjct: 383 LAAIAYQQTVLRAWHEVDDALGAYASELRRHAQLQLALDQNQTALKVAQRAYQQGTADFT 442 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R+ +L A S V LY A+G G++ Sbjct: 443 AVLVAQRSLLASHAELIDCSTASALSVVGLYRALGGGWS 481 >gi|299769343|ref|YP_003731369.1| multidrug efflux system lipoprotein [Acinetobacter sp. DR1] gi|298699431|gb|ADI89996.1| multidrug efflux system lipoprotein [Acinetobacter sp. DR1] Length = 491 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 224/477 (46%), Gaps = 56/477 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESFNDTSLNKLV 65 AGC++ PEY +P ++P +F + K N + +WW FND LN+L Sbjct: 20 AGCSLAPEY-QPAKVIVPVKFKESDPKFEDNNWKIAQPADQQIRGEWWRVFNDAQLNELE 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + A+ N ++ A I A++ + +A+ PS I F P + S L D Sbjct: 79 QQAISGNQSLKAAAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLDEN 134 Query: 124 --------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W+ +DLFG+ + ++ A++ A L + + + Y Sbjct: 135 AHTSAQTLWRAQANVSYELDLFGRIASSVNAATADVQQQEALYQSTLLALQADVAQGYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +I ++ + L + +L +F G S+L + + + E+ + +++ + ++ Sbjct: 195 IRQLDAEQAIYNRTIKLLGETRDLVQTRFKNGLVSELDVSRAQTELATAQTNALNIARNR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ LLG +F +Q + N +L +P G+P+ L+ RPDI E+ +A Sbjct: 255 ANAEHALAVLLGKTPADFSLVIQPLTAN---SLRLPA--GLPSALLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIFDK 337 A+IGIA++ +P L L G AL +++S G WS GP L LP+FD Sbjct: 310 ADNARIGIARAAFFPKLDLTG--ALGYESSTLGDLGKWSSRTFLLGPVAGTILSLPLFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + + Sbjct: 368 GQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQSQALSSSRHAN 427 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSI---AKRQLAKSYVDLYIAIGSGYN 451 LS + YR+G S LD++D +R + E LS R +A V+L A+G G++ Sbjct: 428 QLSHLRYREGAISYLDVIDSDRTILQQE-QLSAQLNGTRMMAS--VNLIRALGGGWH 481 >gi|91779245|ref|YP_554453.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91691905|gb|ABE35103.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 537 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 120/496 (24%), Positives = 217/496 (43%), Gaps = 60/496 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---------------------GNSKNL 44 A L + LLA C+V P Y +P + P F G K Sbjct: 14 AASGLLVALLAACSVEPTYKRPEVDT-PVAFKEAPAASAPSAASAPSAGSAQDNGTWKQA 72 Query: 45 INIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-- 99 D +WW F D LN L + A N + A R+ A+ + R+D FP Sbjct: 73 QPADDAHRGEWWTIFGDPQLNALEEQAAAANQDLKAAAARVQQARAVTQAARSDWFPKLD 132 Query: 100 -------SYASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAY 146 AS + +F+P+ + G Q+ + ++ DLFG+ ++ +S A+ + Sbjct: 133 AGFGPTRERASAASQFLPDNAGGTNGTIWRAQVGASYEADLFGRVGSNVNASRADEQQSE 192 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A +L++ + + +Y R + + + L + ++L +F +G +L + Sbjct: 193 ALFRSVQLSLQADVAQNYFQLRELDTDQDLYRRTVALREDTLKLVERRFKEGDIGELDVS 252 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI- 265 + E+ S +D + + + H+++ LLG P +F +F +P+ + Sbjct: 253 RARNELASARADAVGVARQRAASEHSLAILLGKPPADF---------SFAEAPLVPVTVR 303 Query: 266 ---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPG 319 G+P+ L+ RPDI E+ + + A++G+AKS +P L + G+ T + F Sbjct: 304 VPPGLPSALLERRPDISAAERAMQAANARVGLAKSAFFPKLDITGAAGFESATLGDLFMW 363 Query: 320 YNTHWSFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + + GP L LP+FD G+ K+N+ +A S E +++ VL A +EVE+ L Sbjct: 364 SSRAFILGPFAGTALTLPLFDGGRRKANLAQARSKYDEDVAQYRQQVLVAFREVEDNLAD 423 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + + + AV+ +++ LS Y +G S LD++D ER ++ S Sbjct: 424 LRLLDDQMREQNDAVQASQRAAHLSRTQYTEGAVSYLDVIDGERQVLISQLQASHLSGTQ 483 Query: 436 AKSYVDLYIAIGSGYN 451 A + V+L A+G G+ Sbjct: 484 AVATVNLIRALGGGWG 499 >gi|94312853|ref|YP_586062.1| multidrug efflux system protein [Cupriavidus metallidurans CH34] gi|93356705|gb|ABF10793.1| multidrug efflux system protein [Cupriavidus metallidurans CH34] Length = 499 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 210/465 (45%), Gaps = 40/465 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNS--------KNLINIDTLKWWESFNDTSLNKLVKI 67 +GC++ P Y +P P+ T F G + ++ +D L W + F D L +L+++ Sbjct: 15 SGCSLIPNYQRPAAPVDAT-FPQGEAYPKTAAVDASVTAVD-LGWRDYFTDPRLRELIQV 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQL----- 120 +L N + A + A + RADLFP + A + + +P ++TGQ Sbjct: 73 SLDNNRDLRVAVLNVEAYRAQYRIQRADLFPQVDAAAQGTRQRVPA-DLSATGQRVISSQ 131 Query: 121 ------DSDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + W++DLFG+ R + E LA D A IA +++ + +Y+ R Sbjct: 132 YGVSLGTTAWELDLFGRLRSLSEAAFEQYLAG-DEARRSTQIA---LVASVANAYLTLRA 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E++ + L Y++ L+ +F +G S+L L + E ++++ + + ++ + Sbjct: 188 DEEQLKVTRDTLTTYERTYNLTRRRFEEGIASRLELRQSETQVETARASLAAYTRALAQD 247 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ L+G L Q + L + +G+P+DL++NRPDI E +L + Sbjct: 248 TNALTLLVGSGMPADL----PQGLGLEEKLVAEVPVGLPSDLLQNRPDILSAEHRLKAAN 303 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +P ++L S + F W F P++ LPIF G +++++ Sbjct: 304 ADIGAARAAFFPRITLTASAGTASRQLSDLFAAGQGTWLFSPQIVLPIFTAGSLQASLDY 363 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ ++ T+ A +EV + L + V V + +L+ Y Sbjct: 364 AKIQKDINVAAYERTIQGAFREVADGLAARGTFSDQVQAQVRLVRASQDYFTLAEHRYST 423 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L +LD +R + L + S V+LY A+G G+ Sbjct: 424 GVDSYLTLLDAQRQLYNAQQTLITDRLNQLTSEVNLYKALGGGWT 468 >gi|311104642|ref|YP_003977495.1| efflux transporter outer membrane factor lipoprotein 3 [Achromobacter xylosoxidans A8] gi|310759331|gb|ADP14780.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 3 [Achromobacter xylosoxidans A8] Length = 481 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 106/454 (23%), Positives = 210/454 (46%), Gaps = 25/454 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNL 73 AGC VGP+Y KP + P + + L + D L+ WW+ D L++L+ +AL +NL Sbjct: 24 AGCAVGPDYQKPQVA--PVTLA-SPEQALFSTDQLQRDWWKQLQDPQLDRLIDLALSRNL 80 Query: 74 TILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ----------LDS 122 I A R+ ++ + D P+ + R + ++GQ D+ Sbjct: 81 DIRIAQSRLAESRAVLDEKELDQLPAVTLGGGYERSLSQANAGASGQRNLAQSYRAGFDA 140 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--SKLIPSYIDARHFKERISIAHQI 180 W++DLFG+ + A S D+A+ ++ +++ +Y + R ++R+++A Sbjct: 141 TWELDLFGRL-RRAAEGAAARSEAQAADLAQTRIVVAAEVARNYFELRGAEQRLAVARAN 199 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L+ + ++ + + G + L AE++++++ +P + R+ + I+ L G Sbjct: 200 LESQRDSLRVIQAMVSAGRGDEGDLASARAELETVQASVPVQIAARRLAQYRIAVLAGLR 259 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E P L + IG + L+ RPD+ E+ +A + A +G+A ++LY Sbjct: 260 PVELGEL--DAGKALAP-LDTRLPIGDVSALLSRRPDVLAAERGMAAANADVGVATAELY 316 Query: 301 PSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P + L G +AL + + +S P F + R A + A + Sbjct: 317 PRIDLGGFLGFVALRGADFGSSASRAFSVAANANWPAFHLPTALARKRGAVARADGAVAS 376 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ TVL A++E+E+ALT + ++ + L A ++ L+ + YR+G L +LD Sbjct: 377 YELTVLRAVEELESALTEYGQTQQRLGSLAQAAAHSGRAAELAQLRYREGSTPYLTVLDA 436 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R + + +++A+ + + LY A+G G+ Sbjct: 437 QRTLLRAQDAVAVAETESYTRLIALYKALGGGWE 470 >gi|239820043|ref|YP_002947228.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239804896|gb|ACS21962.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 489 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 126/472 (26%), Positives = 217/472 (45%), Gaps = 48/472 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 AGC VGP+Y +P P LP +F ++G N + WW F D L V+ AL+Q Sbjct: 16 AGCAVGPDYVRP-APALPDRFMGEAALGQRSATANAELAAWWTGFGDAQLAGYVEQALKQ 74 Query: 72 NLTILQATERINAAKENILSVRADLFPS---------SYASIS-------------HRFI 109 NL + QA R+ A+ + + A PS +Y S+ R+ Sbjct: 75 NLDLAQAAARVAQARAGLGAANAAPLPSGNLGAQAARAYQSVETPLGQVLNAQPGFDRYG 134 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N L + W++D+FG RR E++LA+ ++ A +L V ++ YI R Sbjct: 135 SAYEAN----LGASWELDIFGGLRRGREAALADYQASEAGAAATRLAVAAQTADIYITLR 190 Query: 169 HFKERISIAHQIL----DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R+ IA + + DL K I L H K G ++L L + E + + + +P LE Sbjct: 191 GLQARLDIARRQVATQQDLLAK-IGLLHGK---GLATELQLHQAEGALAQVRASVPALEA 246 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + +LG P + P + G PA+L+R RPD+ E+ Sbjct: 247 GEAAAMNALDVMLGTAPGAHRAELAAAAAIPVAPGIGA---TGSPAELLRRRPDLIAAER 303 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +LA S A+IG+A ++ YP LSL G+I + N F G + + L +FD + Sbjct: 304 RLAASNARIGVAVAEYYPKLSLAGTIGSATSVASGNLFTGGASQAAALLGLRWRLFDFAR 363 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I + I A+ E ++ L A ++VENA +++ + ++ L ++ Sbjct: 364 IDAQIELAKGQDAELLAAYRLAALRATEDVENAFSALVKREEQAALLAQGEASLGRARGA 423 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S Y++G SL+++L + + +V + A+ + A++ V + A+G G+ Sbjct: 424 SFAAYQRGVVSLIEVLQADESMLRVADARAQAQTESARAAVGAFKALGGGWQ 475 >gi|207722512|ref|YP_002252948.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum MolK2] gi|206587694|emb|CAQ18276.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum MolK2] Length = 483 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 215/459 (46%), Gaps = 30/459 (6%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC++ P Y +P M L T+ ++ WW+ F+D LN+L++ AL++N Sbjct: 21 GCSLAPPYERPAMELPAHWQTEAPWRAAQPADAAPKGPWWQRFDDPQLNRLMEQALRENQ 80 Query: 74 TILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPNLKTNST 117 ++ A + A+ RA L P A S S + ++ + Sbjct: 81 SLKVAVSNLEQAQALTRVARASLLPQVTAATNDTRLRTSADRPLSSYSTPTVSTVQNDFV 140 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + D ++ DLFG+ R +I ++ A+ A A ++ +L + +++ ++ R I + Sbjct: 141 VRADVSYEADLFGRVRSNIANATASETQAAANLENFRLLLAAQVATTWYSLRETDAEIDV 200 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L L +K + + G S L L + +A + + + L+K H ++TL Sbjct: 201 VQQGLALQRKALAFVTSRHQDGVASGLDLAQQQALVDTTATQAELLQKQRTQYEHALATL 260 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA F ++ QP + I + +P+D+I RPD+ E+ A + A +G+A+ Sbjct: 261 VGTPAPAF--HLAPVPLAGQPPV---IPVALPSDVIERRPDVAAAERGAAAANASVGVAR 315 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+ L G + F + WSFG ++ +FD G+ ++ + A++ + Sbjct: 316 AAFFPSIMLGGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRARVDFADAGYRG 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A++EVE+ L+ + + T+ + +VE +K ++ Y G + LD Sbjct: 376 AIANYRQTVLGALQEVEDGLSGLQALDRAATQARASVESARKVYDIASARYEGGLATSLD 435 Query: 414 ILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++A + + I +QL S V L A+G +N Sbjct: 436 VITAQQALLNNQRTAVQILGQQLTTS-VFLVKAVGGDWN 473 >gi|260550881|ref|ZP_05825087.1| multidrug efflux system outer membrane protein [Acinetobacter sp. RUH2624] gi|260406008|gb|EEW99494.1| multidrug efflux system outer membrane protein [Acinetobacter sp. RUH2624] Length = 483 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 123/476 (25%), Positives = 219/476 (46%), Gaps = 54/476 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTSLNK 63 AGC++ PEY +P ++P +F + K I + K WW +ND LN+ Sbjct: 21 AGCSLAPEY-QPAKVIMPVKFKESDPK--IEDNNWKIAQPADQQTRGEWWRIYNDAQLNE 77 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD 123 L + A+ N + I A++ + +A+ PS I F P + S L D Sbjct: 78 LEQQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGPTRQKPSPASLGLD 133 Query: 124 ----------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 W+ +DLFG+ + ++ A+L A A L + + + Y Sbjct: 134 DNAHTSAHTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSALLALQADVAQGY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R +I ++ + L + +L L+F G S+L + + + E+ + ++ + + Sbjct: 194 FLIRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTELATAQTTALNIAR 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H ++ LLG P +F +Q + N I G+P+ L+ RPDI E+ Sbjct: 254 NRASAEHALAVLLGKPPADFNLPVQSLTAN-----SIRFPAGLPSTLLERRPDIAAAERA 308 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPK----LYLPIF 335 +A A+IGIA++ +P LSL G AL +++S WS GP L LP+F Sbjct: 309 MAADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLLGPVAGTILSLPLF 366 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + + A+ + Sbjct: 367 DGGQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQALSSSRH 426 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LS + YR+G + LD++D +R + E + K + ++L A+G G++ Sbjct: 427 ANQLSHLRYREGAINYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGWS 482 >gi|206561157|ref|YP_002231922.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198037199|emb|CAR53120.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 507 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/473 (23%), Positives = 219/473 (46%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALFATGCTMAPHYKRPDAPVAQAYPASGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN 111 E F D L +L++IAL+ N + + I AA+ RA LFP+ + + + +PN Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNRQRLPN 125 Query: 112 LKTNSTGQ---------LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 T G+ L + W++DLFG+ + + + +LA L ++YA+ ++++++S++ Sbjct: 126 SLTAVPGRNITTTYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QASEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + +++ ++ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P + LPIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 362 GQNIANLDLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYAAQQSLISARLARWTNLVDLYRALGGGW 474 >gi|268679791|ref|YP_003304222.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurospirillum deleyianum DSM 6946] gi|268617822|gb|ACZ12187.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurospirillum deleyianum DSM 6946] Length = 473 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 118/473 (24%), Positives = 237/473 (50%), Gaps = 36/473 (7%) Query: 4 LRAIF--SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +R I+ SL + AGC++ PE P ++ ++ + + ++WW+++ D L Sbjct: 1 MRNIYALSLSAFIFAGCSLSPELNIPTTQFPERYEAVASTPSSTTL--MQWWKAYGDEKL 58 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPNL- 112 + L++ AL N + + I+ A+ + S ++ +PS Y S + F Sbjct: 59 SALIEEALANNYDLQTSMANISLARATLSSNTSNRYPSLDVEGSGRKYRSSADTFSSTTH 118 Query: 113 KTNSTGQLDS--DWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T +T L + +++DL+G+ + E+S A+L ++YA + K+ +I+ + Y Sbjct: 119 NTYNTFGLSAVLSYELDLWGKYKEAEASARASLIASYAAKETVKIALIASVADGYFTLVS 178 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ I + + ++ ++ +++ G+ +K +L++ EAE++S + + +LE+S Sbjct: 179 LNEQLDIVKETITAREEGLKRYRVQYQAGSITKATLLQEEAELRSAQINKDSLEQSIVTQ 238 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKL 285 ++ L+G + + N P + +P +I +P+ +L+ NRPDI+ E+ L Sbjct: 239 QSALAVLVGKSPKAIAEFAK----NSLPRV-LPQDIAVPSSLPSELLNNRPDIKQAEENL 293 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG+A++ +PS+SL+G + N + +FG + P+F+ GK S Sbjct: 294 KAANANIGVARAAYFPSISLSGVLGYESTQLSNLVSSRSAMHNFGGSVASPLFNMGKTSS 353 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS---- 398 ++ A+++ + I++ +TV A +E +AL N + TKL+H + + SM+ Sbjct: 354 SVESAKANKELAEISYAQTVQKAFQESYDAL---NTRHILSTKLEHQ-KAYLDSMAQVFV 409 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS Y G L +LD +R ++ L K++L S V LY A+G G++ Sbjct: 410 LSKRQYEAGYGDYLALLDAKRNYLSAQLALIQVKQELLSSGVSLYKALGGGFD 462 >gi|217968942|ref|YP_002354176.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|217506269|gb|ACK53280.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 492 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/467 (24%), Positives = 220/467 (47%), Gaps = 28/467 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLN 62 + +L L C++ P + +P P+ P F + DT+ W + F D L Sbjct: 32 VVALAAATLGACSMIPVFERPAAPV-PATFPQATPTAAPVVAPLADTIAWRDYFADQRLR 90 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLK----TN 115 +++ +AL+ N + A I A+ +ADLFPS S + R +L +N Sbjct: 91 EVIALALENNRDLRVAALNIERARAQYGIQQADLFPSIAVSGGQSAQRVPGDLSMTGDSN 150 Query: 116 STGQLDSD-----WKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + Q ++ +++D FG+ R +E +L N + A++++++++ +++ Sbjct: 151 VSRQYSANLGFASYELDFFGRVRSLEEQALQNYLATEEARRSAQISLVAEVANAWLRLAA 210 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +ER+++AH + + +L GA S L + + E ++S +D E + Sbjct: 211 DRERLALAHNTRQTRQASFDLVRRSLELGAVSALDVHQAETLLQSARADAARFETVVAQD 270 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ L+G P T +++ + G+P++++ RPDI E+ L Sbjct: 271 RNVLAQLVGGGVPDTLLPDGLEQAVATV-----AELPAGVPSEVLTRRPDIVQAERALLA 325 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +P ++L G+ + T D F G + WSF P+L LPIF+ G++++++ Sbjct: 326 ANASIGAARAAFFPRITLTASAGTASSTLDGLFDGGSGAWSFVPQLRLPIFEAGRLQASL 385 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 AE +++ + +A +EV +AL + + + V + S LS Y Sbjct: 386 DLAEIQRDINVAQYEKAIQSAFREVADALAERATVAERIDARRKQVAATQNSFKLSDARY 445 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L +LD +R+ E++L + A + V+LY A+G G+ Sbjct: 446 RGGVDSYLSLLDAQRSLYAAELELIGVRLIEATNRVELYKALGGGWQ 492 >gi|282891750|ref|ZP_06300231.1| hypothetical protein pah_c197o059 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498334|gb|EFB40672.1| hypothetical protein pah_c197o059 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 491 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 118/481 (24%), Positives = 225/481 (46%), Gaps = 68/481 (14%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC + P Y + ++ L P ++ + N+ + L N+ WW+ F+D L++L+ +AL+ N Sbjct: 16 GC-IRPYYDRQYVDL-PDEWRLQNNDDSTLCNV---GWWKQFDDPVLDELITVALKNNQD 70 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH-RF------------------------- 108 + A R+ A LFP ++S+ RF Sbjct: 71 LQVAINRVYEYYSLYRVESAPLFPFLTGNVSYNRFKSSIALPSALEPSQNINTFNSNTPI 130 Query: 109 ---IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYA----QVDIAK---LNVIS 158 + + + L+ +W++D +G+ R D+AYA Q++ + + V++ Sbjct: 131 SPGVSRINNDFLASLNLNWELDFWGRIRSAS------DAAYADMLGQIEARRTVIITVVT 184 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +I +YI R ++ I+ + L +++EL+ +F G TS+L + + E+E+K+ Sbjct: 185 SVINAYITLRELDAQLEISKKTLQSRTRSLELAVNRFNVGETSRLEVRQAESEVKTAAIS 244 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + E+S + IS LLG L K + F+ + IP +G+P+DL+ RPDI Sbjct: 245 VLEFERSIPQQENLISILLGENPHSILR--GKALDAFKYPVKIP--LGLPSDLLTRRPDI 300 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG---------SIALTHDNSFPGYNTHWSFGPK 329 E L + A + A++ +P +L G S+ LT F W +G Sbjct: 301 VQAEYNLIAANAHVTQARALFFPQFTLMGIYGSESDRISLFLTSPAEF------WQYGIS 354 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 IFD G+I + ++ E T+++T+L A +E +AL + +++++V + Sbjct: 355 AVQTIFDAGQIYYRVETEKARRDELLFTYRQTILTAFREANDALIACQKNQQLVIEHTSQ 414 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V++ + L+ + Y +G L +LD ER+ + ++DL ++ + + V LY A+G G Sbjct: 415 VKVLSDYLQLAKLRYVEGEVDYLTVLDAERSLFRSQLDLVQSQAENFSAVVQLYKALGGG 474 Query: 450 Y 450 + Sbjct: 475 W 475 >gi|170738037|ref|YP_001779297.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169820225|gb|ACA94807.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 488 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 125/474 (26%), Positives = 218/474 (45%), Gaps = 53/474 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 + L+ C+ P Y P L P F +K I WW++F D L++L Sbjct: 14 VAFLSACSFAPAYHAPQTAL-PASFKEAGGWQAAKPADRIARDGWWKAFRDPVLDRLEAR 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI-----PNLKT 114 N + A R + A R+ LFP SS + R + PN+ Sbjct: 73 VAAANPDVAAAVARHDEAAALFDQARSGLFPTIGLGAQISSNRQSATRPLRGANQPNVYG 132 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKE 172 ++T D+ +DL+G+ R+ E + D+ + D+A +L++ + L +Y R + Sbjct: 133 DNTLDAGFDYDLDLWGKVRN-EVAAGRADAQASADDLASVRLSLQASLASAYFSLRGLDQ 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + +D Y++ + L+ + G S L + + ++ S + + + H+ Sbjct: 192 QQQLLADTIDTYQRALRLTMSRHAGGIASDLDVSRARTQLDSARASAEDVRARRALYEHS 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADS 288 I+TL G PA+ F + P+L Y+P I GIPA L++ RPD+ E+++A + Sbjct: 252 IATLTGVPASSF---------SLTPDLNAAYLPTIPAGIPATLLQRRPDVAAAERRMAAA 302 Query: 289 VAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 AKIG+ ++ +P ++L S L H P N WS GP L L +FD G+ ++ Sbjct: 303 NAKIGVVRAAFFPDVTLGLVGGYQSSGLGHWLRAP--NEIWSIGPSLALTLFDGGRRQAL 360 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +A + E ++ VL+A ++VE+ L + + Q A++ ++++ LSM Sbjct: 361 TDQARAQLAENGAKYRAVVLDACQQVEDNLALTHHLGDEADREQEALDAAERTLQLSMSR 420 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIA------KRQLAKSYVDLYIAIGSGYN 451 YR G S LD++ + E+D IA +RQLA V L A+G G++ Sbjct: 421 YRDGVVSYLDVVTAQ----TTELDTKIAMLELDTRRQLAA--VGLIAALGGGWS 468 >gi|121599999|ref|YP_992986.1| hypothetical protein BMASAVP1_A1660 [Burkholderia mallei SAVP1] gi|254178391|ref|ZP_04885046.1| outer membrane efflux protein [Burkholderia mallei ATCC 10399] gi|121228809|gb|ABM51327.1| putative membrane protein [Burkholderia mallei SAVP1] gi|160699430|gb|EDP89400.1| outer membrane efflux protein [Burkholderia mallei ATCC 10399] Length = 516 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 43/474 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 37 GCTLAPRYERPAAPVPAHYWSTAAGAPREAGPAAAGGPRAMPDARRGDAGRDARDARLDD 96 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 97 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 156 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 157 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 216 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 217 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 276 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 277 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 332 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 333 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 392 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 393 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 452 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 453 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 506 >gi|293604956|ref|ZP_06687353.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] gi|292816784|gb|EFF75868.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] Length = 491 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 115/481 (23%), Positives = 228/481 (47%), Gaps = 41/481 (8%) Query: 4 LRAIFSL-FIVLLAGCTVGPEYTKPHMPL---LPT--QFSIGNSKNLINIDT--LKWWES 55 +R + S+ LAGC++ P Y +P P+ PT + S+ + T + W + Sbjct: 5 MRTLLSVSLAAALAGCSLAPTYERPDAPVSAAYPTGAAYKADGSQLAQGMSTADVGWRDF 64 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL 112 F+D L +L++++L N + A + AA+ RADL PS + + R +L Sbjct: 65 FSDPLLQQLIELSLANNRDLRVAALNVEAARAQYRIQRADLLPSVGVAAQESAQRTPADL 124 Query: 113 KTNS---------TGQLDSDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVIS 158 + G S W++DLFG+ R + ES LA LD +A +I+ Sbjct: 125 SASGRATTSHNYQVGAALSAWELDLFGRIRSLSDQALESYLA-LDETRTATQLA---LIA 180 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ R +E + + + L + + +L+ + QG ++ L L + E +++ + + Sbjct: 181 EVANAYLTLRADQELLGLTRETLKSQEDSFKLTQQSYDQGLSTSLDLSQAEVSLRTAQRN 240 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRP 276 + + + + ++ L+G P + + Q+ + +P + G+P+DL+ RP Sbjct: 241 LSQYTRQAAQDRNALTLLVGQPMSPEIVAALDQAVKLDDGM-LPTTLPAGLPSDLLARRP 299 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E +L + A IG A++ +P+++L G+ + + F G + WSF P++ +P Sbjct: 300 DIRAAEHQLKGANANIGAARAAFFPTITLTGQAGTASASLGGLFEGGSGAWSFVPRITVP 359 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G +++N+ A+ Q +++++ +EV +AL + + V + Sbjct: 360 IFAGGSLQANLDLAKVQKNIQVAQYEKSIQTGFREVADALAGRGTLDDQIEAQRLLVNAN 419 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ S +RQG L +LD +R+ + + VD +A+ + V LY +G G+ Sbjct: 420 QRAYDASDQRFRQGIDDYLSVLDSQRSLYTSQQALVDTRLAR---LSNLVTLYKVLGGGW 476 Query: 451 N 451 Sbjct: 477 T 477 >gi|217421267|ref|ZP_03452771.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 576] gi|217395009|gb|EEC35027.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 576] Length = 516 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 43/474 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 37 GCTLAPRYERPAAPVPAHYWSTATGAPREAGPAAAGGPRAMPDARRGDAGRDARDARLDD 96 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 97 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 156 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 157 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 216 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 217 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 276 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 277 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 332 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 333 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 392 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 393 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQTVYGADAERL 452 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 453 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 506 >gi|76809427|ref|YP_333454.1| Outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|242316267|ref|ZP_04815283.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1106b] gi|254260177|ref|ZP_04951231.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1710a] gi|76578880|gb|ABA48355.1| Outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|242139506|gb|EES25908.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1106b] gi|254218866|gb|EET08250.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1710a] Length = 513 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 43/474 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 34 GCTLAPRYERPAAPVPAHYWSTATGAPREAGPAAAGGPRAMPDARRGDAGRDARDARLDD 93 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 94 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 153 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 154 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 213 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 214 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 273 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 274 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 329 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 330 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 389 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 390 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 449 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 450 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 503 >gi|94313571|ref|YP_586780.1| RND efflux system outer membrane lipoprotein [Cupriavidus metallidurans CH34] gi|93357423|gb|ABF11511.1| RND efflux system, outer membrane lipoprotein [Cupriavidus metallidurans CH34] Length = 495 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 227/464 (48%), Gaps = 35/464 (7%) Query: 18 CTVGPEYTKPHMPLLPTQF-------SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 C VGP+Y P + PTQ+ +I +++ + +DT WW F D L K+V+ AL+ Sbjct: 37 CAVGPDYRTPDSEM-PTQYQHAADVAAINDAREPVALDT--WWAGFQDPVLTKIVERALE 93 Query: 71 QNLTILQATERINAAKENILSVRADLFP--SSYASIS--HRFI-----------PNLKTN 115 QNL + + R+ A+ A+L P ++Y+ ++ H+ + P N Sbjct: 94 QNLDMAASIARVAQARAAANFAGAELLPQGNAYSDVTKLHQSVQSPLGKIGSTFPGYDRN 153 Query: 116 ST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T G + W+ID+ G RR E++ A L +A A ++ V ++ +Y R Sbjct: 154 QTLYSVGAA-ATWEIDIAGGLRRGAEAANAELQAAEANHMGVRILVAAEAADAYFRVRGA 212 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + RI+IA Q ++ ++ ++L L+ G ++ + EA++ IP L+ + Sbjct: 213 QARIAIAQQQVETNQRLLDLVRLRLADGIGAEREQAQAEAQLSQTRVTIPPLQIELETQL 272 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G + ++ + Q + + G PA+L+ RPD+ E++LA S A Sbjct: 273 NRLDVLMGAQPGTYAAELRDSKHETQAVPQVALAQG-PANLLERRPDVIAAERRLAASSA 331 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A ++ YP +SL+ G +L+ F + L +FD G++ + + +A Sbjct: 332 RIGVATAEYYPKVSLSALLGFESLSAGKLFTAQAFQPAAAAGLRWRLFDFGRVNAEVAQA 391 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + E ++++++L A ++VENAL S+ + + +L + H+++ + S Y+ G Sbjct: 392 KGANAEALASYRKSMLQATEDVENALISLAQLESQNRELAVEIRAHERARNASEDAYKGG 451 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL ++LD +R + + A++ V + A+G G++ Sbjct: 452 VVSLYEVLDEDRQLLAARDQQARVQADNARAAVSAFRALGGGWS 495 >gi|53719415|ref|YP_108401.1| multidrug efflux system putative membrane lipoprotein [Burkholderia pseudomallei K96243] gi|126455205|ref|YP_001066170.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1106a] gi|226196416|ref|ZP_03791998.1| outer membrane efflux protein OprA [Burkholderia pseudomallei Pakistan 9] gi|254197258|ref|ZP_04903680.1| outer membrane efflux protein OprA [Burkholderia pseudomallei S13] gi|52209829|emb|CAH35801.1| multidrug efflux system putative membrane lipoprotein [Burkholderia pseudomallei K96243] gi|126228847|gb|ABN92387.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 1106a] gi|169653999|gb|EDS86692.1| outer membrane efflux protein OprA [Burkholderia pseudomallei S13] gi|225931633|gb|EEH27638.1| outer membrane efflux protein OprA [Burkholderia pseudomallei Pakistan 9] Length = 516 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 43/474 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 37 GCTLAPRYERPAAPVPAHYWSTATGAPREAGPAAAGGPRAMPDARRGDAGRDARDARLDD 96 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 97 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 156 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 157 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 216 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 217 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 276 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 277 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 332 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 333 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 392 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 393 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 452 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 453 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 506 >gi|149185696|ref|ZP_01864012.1| RND efflux system outer membrane lipoprotein NodT [Erythrobacter sp. SD-21] gi|148830916|gb|EDL49351.1| RND efflux system outer membrane lipoprotein NodT [Erythrobacter sp. SD-21] Length = 433 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 11/405 (2%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F+D L+ L+ NL I A +R+ AA+ + + RAD FP+ S + Sbjct: 20 WWRPFSDPVLDGLIARGFAANLDIAAAGDRLRAAEALLRADRADRFPTLDGSANIGVETG 79 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANL---DSAYAQVDIAKLNVISKLIPSYI 165 + +G + + +DL G R E LA ++ Y Q + +L V + + Y+ Sbjct: 80 DDGTRVTGSGGIFGSFDLDLSG-RLGAEIRLATARYAEAGYLQAERRRL-VAAAIAAQYV 137 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R ++++ + +L ++ + + L+F G ++ L + + A++ ++ + +E S Sbjct: 138 EYRRTGAQLALLEESTELQRQTLRIVTLRFEAGLSANLDVRRAAADLAQTQARLGLIEVS 197 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ LLG ++ P+ IG P +L+R R D+ E +L Sbjct: 198 RAEARHALAVLLGETPGTLDIPASTGEDDVIPDYSAGPPIGGPVNLLRRRGDVLAAEARL 257 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSN 343 A + A++GI +SDL PSL + GSI L D S G + + G L LP+FD G+ ++ Sbjct: 258 AAAAAQVGIEQSDLRPSLVVPGSI-LIGDGSLDGLFAGFLATLGAALDLPLFDGGRRRAE 316 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A + +++T L A+ E ENAL +I ++ L A+E + ++ S Sbjct: 317 VEAASAELDASLAEYRQTFLLALGEAENALVAIGAYRQRANALAEAIEQSETALGQSNAL 376 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 YR+G SL D+LD +R L + LA ++++L+ A S Sbjct: 377 YREGLASLFDVLDAQRQLIASRQSLLDNQADLAVAFIELHSAAAS 421 >gi|134294075|ref|YP_001117811.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134137232|gb|ABO58346.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 490 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 115/462 (24%), Positives = 215/462 (46%), Gaps = 33/462 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P YT+P P+ + G S N + W E F D L +L+ Sbjct: 18 GCTMAPHYTRPDAPVAQAYPAGGVYATQPAAAGTRSANGQAATAIGWREFFADPRLQRLI 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL---------K 113 +IAL N + A I A++ RA LFP+ + S R+ + + Sbjct: 78 EIALNNNRDLRVAVLNIEASRAQYQITRAGLFPTLDGTGSGSIQRYPAGVSTTRQPLITR 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T S G L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Y+ + Sbjct: 138 TYSVG-LSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQVADQYLTLLSTE 195 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + + + L + + +L+ L+F G S+L L + + ++ ++ ++ V+ Sbjct: 196 DLLKVTENTLKTAQASYDLTKLQFDNGTGSELDLRQAQTVVEQALANQQAQARARAQAVN 255 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+G P + L S + Q NL + G+P+DL+ RPD+ E+ L + A Sbjct: 256 ALVLLIGEPLPDDLP--AGMSLDAQ-NLLTDVPAGLPSDLLTRRPDVMQAEQTLLAANAN 312 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL G+ + T F WSF P+L +PIF+ G+ +N+ A Sbjct: 313 IGAARAAFFPRISLTAAFGTASPTLGGLFKAGTAAWSFAPQLTMPIFEGGQNIANLNLAN 372 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +++ + +A +EV + L + + L+ ++ LS + Y+ G Sbjct: 373 VQKRIEIANYEKAIQSAFREVSDGLAARGTYDLQIAALERNEHAQQRRFDLSDLRYKNGV 432 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + + L A+ + VDLY A+G G+ Sbjct: 433 DSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 474 >gi|270158485|ref|ZP_06187142.1| NodT family efflux transporter [Legionella longbeachae D-4968] gi|289166683|ref|YP_003456821.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269990510|gb|EEZ96764.1| NodT family efflux transporter [Legionella longbeachae D-4968] gi|288859856|emb|CBJ13842.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 522 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 120/483 (24%), Positives = 227/483 (46%), Gaps = 52/483 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFS--------------IGNSKNLINIDTL--KWW 53 L LL+ CTVGP+Y +P +LP ++ +G ++ L +WW Sbjct: 37 LVFFLLSNCTVGPDYKRPTQ-ILPQSYTKKSLGKKTPATATKMGEAQYFAPNKELPKQWW 95 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISH 106 + F+ L+ +V +LQ N T+ A E ++AA EN + + L P +Y + Sbjct: 96 QLFHSKDLDDVVLASLQHNPTVTSAQESLSAALENAYAGKGALLPFVGSSFSPTYQQTAK 155 Query: 107 RFIPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 L +N TGQL + D+FG RR IES +A ++ + Q++ L + + Sbjct: 156 ILTSVLASNQYLYSLFTGQLYVSYTPDVFGGTRRQIESLVAQVEVRHFQLEATYLTLTTN 215 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + I +E+I++ ++ KK + + + G T+ ++ +A + + E+ + Sbjct: 216 VVNAVIQEAALREQITVTQHLIANQKKLLVILKQQLKLGDTALSNVATQQAALAASEAML 275 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 P LEK + ++ L G +P + + S L++P + + +PA L+ NRP Sbjct: 276 PPLEKQLAIQRDLLNALTGRFPDDQHTPQFRLSS------LHLPRELPLSVPAKLLENRP 329 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN------GSIALTHDNSFPGYNTHWSFGPKL 330 DIR E ++ + A IG+A ++ P++++N G+ A T W+ + Sbjct: 330 DIRAAEAQMHAANALIGVAIANRLPNVTINSSGTNLGTAATTIGTLLQSNTQFWAMAGII 389 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIFD G ++ R AE+S ++ ++ TV+NA + V + L +I D + L+ A Sbjct: 390 TQPIFDAGTLRHKQRAAEASYRQAAADYRATVINAFQNVADTLKAIQSD---ASSLKTAS 446 Query: 391 ELHKKSMSLSMINYRQ---GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + +++ I RQ G S + ++ E + +++L A+ V L+ A+G Sbjct: 447 NVERAALTSLTIAQRQFTLGDSSTVALILNEITYQQAKLNLIQAQANRLADTVALFQALG 506 Query: 448 SGY 450 G+ Sbjct: 507 GGW 509 >gi|16418851|gb|AAL19304.1| homology to outer membrane efflux protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|261245633|emb|CBG23429.1| putative outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|323128663|gb|ADX16093.1| Putative outer membrane efflux protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987298|gb|AEF06281.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 503 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 37 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 96 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 97 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVMDESEINRRYEA 156 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 157 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 212 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 213 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 272 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 273 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 331 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL GS A T S G + W F P++ LP+F G +++++ R Sbjct: 332 RIGAARAAFFPTISLTGS-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 390 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 391 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 450 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 451 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 495 >gi|73542745|ref|YP_297265.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72120158|gb|AAZ62421.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 482 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 112/478 (23%), Positives = 220/478 (46%), Gaps = 58/478 (12%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + + + L GC +GP Y +P P + +Q+ + + I D+ WW FND LN L+ Sbjct: 8 LGACAVAALGGCAIGPNYQRPETPDV-SQYRMDTGQLAIAADS-DWWNQFNDPVLNALID 65 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR--------FIPNLKTN 115 AL N + A RI+ + ++ R+ FP A+ R F P Sbjct: 66 EALANNYDVRIAAARIDEFRGQLMVARSGFFPQLNLGAAATRQRAGTFNGTPFAPFDGPR 125 Query: 116 STGQL--DSDWKIDLFGQ-RRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++ QL ++ W++DL+G+ RR E++ A+L ++ YA+ + L++ + ++ Y R Sbjct: 126 NSYQLLANASWELDLWGRIRRQAEAAEASLWNAEYARRGVV-LSLAASVVQGYATLRGLD 184 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ +A Q L+ +++ ++ G S++ L + + + E+ IP + + Sbjct: 185 AQLEVAKQTLESRASGLDIFRQRYEGGVISEMELAQAQNDFYVAEASIPQIRTGIAQTEN 244 Query: 232 NISTLLG-YPA----TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +S L+G P + ++ +Q S + +PA L+ RPD+ E+ Sbjct: 245 ALSVLVGRQPGPIERGKGIYELQAPS----------VGADLPAMLLSRRPDVLQAEQVAV 294 Query: 287 DSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A++G A++ P+++L+G ++A + + + W FG L PIF G I+ Sbjct: 295 AANAQLGAAQALYLPAVNLSGLFGAVAASPAGLWDSASRVWGFGAGLTQPIFQGGAIRGQ 354 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL---- 399 ++ A + E + +Q TVL A+ +V +AL + E + + L+ +KS+++ Sbjct: 355 VQTASAQRTEALLAYQGTVLAALADVNSALANGVETRNRLGSLRQ----QEKSLTVYADQ 410 Query: 400 SMINYRQGRYSLLDI-------LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G S L++ D + A + +VD + LY ++G G+ Sbjct: 411 AYARYEGGYSSYLEVTNAREKLFDAQLAAIQGQVD-------VLNGTAALYKSLGGGW 461 >gi|319794790|ref|YP_004156430.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315597253|gb|ADU38319.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 527 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 102/404 (25%), Positives = 187/404 (46%), Gaps = 47/404 (11%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPH----------------MPLLPTQFSIGNSKNLIN 46 +LR +LAGC VGP Y P +P P Sbjct: 38 VLRLGVLALAAVLAGCAVGPAYKVPTSVASTAWKEQKTAEGWLPAAPAD----------A 87 Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 +D +WW+ F D +L++L N I A A+ + RA LFPS S S Sbjct: 88 LDRGEWWKLFADPTLDELAGRVQVSNQNIAAAVANYTQAQALVRGERAALFPSVSFSGSG 147 Query: 107 RFIPNLKTNS---------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 R N+ +NS + L++ W D++G+ R + S+ AN ++ A + A+L+ Sbjct: 148 RRSGNVNSNSDTASPSNSFSASLNASWTPDVWGRLREAVSSAQANAQASEADLAAARLSA 207 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I L +Y R I + + + Y++ E++ ++ G ++ +++ + ++ + + Sbjct: 208 IGDLATNYFSLREADAEIVLLDETIAGYQRAFEITGNRYAAGIAAQTDVLQAQTQLVNAK 267 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNR 275 +D L ++ H I+ L+G +F K + P +P + G+P+ L++ R Sbjct: 268 ADRVGLTRTRATLEHAIAMLVGVAPADFTLPAAK----WTPT--VPGVPTGVPSTLLQRR 321 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLY 331 PDI E+ +A + A+IGIA++ +P++ L S+ T+ + F NT WS G + Sbjct: 322 PDIAAAERSVASANAQIGIARAAYFPNIPLTASVGSTNASRVKDLFSSANTLWSLGFSVA 381 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 +FD G I +++ A++ + +++TVL A + VE+ LT+ Sbjct: 382 QVVFDAGAIGASVDAAKAGHEAAVARYRQTVLTAFQAVEDQLTT 425 >gi|223934822|ref|ZP_03626741.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223896275|gb|EEF62717.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 485 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 114/475 (24%), Positives = 224/475 (47%), Gaps = 52/475 (10%) Query: 15 LAGCTVGPEYTKPHMPLL------PTQFSIGNSKNL-------INIDTLKWWESFNDTSL 61 L GCT+ P+Y +P P+ P ++ L + + W + F+D L Sbjct: 15 LVGCTMIPKYERPTAPVSTNWPSGPAYVKGASTSGLDAKAGKGVATADIGWRDFFSDPRL 74 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKT 114 +L++++L NL + A + + R++LFP+ + A F N + Sbjct: 75 QQLIQLSLTNNLDLRIAALNVEQTQAQYRIQRSELFPTIDAGAGFTRARTPAAFSFNGRA 134 Query: 115 NSTGQLDSD-----WKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYID 166 + Q ++ +++DLFG+ R + S L+ +A + ++++++++ Y+ Sbjct: 135 ITASQYTANLSTTAYELDLFGRVRSL--SRQALEQYFATEEARQSVQISLVAQVAIQYLT 192 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R E++ ++ Q LD + + EL+ F G S+L L EA++ S ++++ + Sbjct: 193 ERELDEQLVVSRQTLDAVQSSYELNRRSFEAGVASELDLRSAEAQVGSAKANVAAYMRLR 252 Query: 227 RMNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 V+ + L+G P + + NF +L G+P+DL++ RPDI E +L Sbjct: 253 AQAVNTLEVLVGQPIPADLPEGRALDAQNFANDL----PEGLPSDLLQRRPDIVQAEYQL 308 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P ++L G+ L + F G WSF P++ +PIF G+ K+ Sbjct: 309 RAANANIGAARAAFFPRVTLTGAAGGASLQLTDLFKGPAAAWSFSPQITVPIFTGGRNKA 368 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A+ + + + +Q ++ N +EV +ALT+ + + + V+ ++ L+ Sbjct: 369 ELDVAKITKRIEVAQYQRSIQNGFREVADALTARAMLEDQIQAQETQVKAEQQRYLLADR 428 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 YRQG S L +L ++ DL A++ L +S ++ LY A+G G+ Sbjct: 429 RYRQGVDSYLTVLTAQQ-------DLYSAQQSLLQSRLARFSNFITLYKALGGGW 476 >gi|187926362|ref|YP_001892707.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|241665849|ref|YP_002984208.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] gi|187728116|gb|ACD29280.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|240867876|gb|ACS65536.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 501 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 222/466 (47%), Gaps = 34/466 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQ 70 ++ C VGP+Y +P + P Q+ G+ K D + KWWE FND LN L + Sbjct: 21 VSACAVGPDYKRPDAEV-PQQYKEAGDWKVADPSDAIARGKWWEIFNDPQLNALEEQVAA 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NSTGQLDS------ 122 N IL A + A+ + S +A FP+ A+ S +++T N G L + Sbjct: 80 ANQNILVAEAQYRQAQALVQSAQASFFPTLGANASATRSRSVRTSVNPDGSLSTGNPSLL 139 Query: 123 ---------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 W++DL+G+ RR +ES+ A+ ++ + A L+ + L +Y R Sbjct: 140 NSQSLSLNASWELDLWGRIRRTVESNKASAQASAGDLSSALLSAQATLAQNYFQLRVTDT 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + H Sbjct: 200 QKAVLQRTVANYERFLKLTQNQYAVGVAQRSDVLTAQTQLKQSQALLLDTEVTRAQLEHA 259 Query: 233 ISTLLGYPATEF-LHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G P EF L S P L IP+ + P+ ++ RPDI E+++A A Sbjct: 260 IAVLIGKPPAEFSLAPATAASAADLPALPAIPLEV--PSAVLERRPDIAAAERRMAAVNA 317 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+AK+ +P+L+L S L + + P + WS GP L +FD G + + Sbjct: 318 QIGVAKAAYFPTLTLGASAGLAANTLTRLATLP--SRVWSIGPTLAATLFDGGARAAAVD 375 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L++ YR Sbjct: 376 KAGAAYDASVATYRQTVLGAFQDVEDNLAALRWQTQEFGVQADAVKAAQEAAQLNLNRYR 435 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+++ + E L + + + V L A+G G++ Sbjct: 436 AGTVSFLEVITAQATAYSAERTLLTLQGKQYSAAVLLVKALGGGWH 481 >gi|186471213|ref|YP_001862531.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184197522|gb|ACC75485.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 516 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 214/461 (46%), Gaps = 19/461 (4%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLV 65 L V L GC VGP++ H S ++ D +WW+ F D +L +L+ Sbjct: 14 LGAVCLNGCMRVGPDFHPQHEAWSERWRSASIEQVTQPGAQPDLRQWWQIFGDANLEQLI 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNSTG- 118 A N + A R+ A+ + A +P + + F K T S G Sbjct: 74 AEADANNGDLKIAGLRVLEARAQLGVALAGRYPQVQQASGNVFYGGRKRSDGFNTRSGGY 133 Query: 119 -----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L W++D +G+ R IES+ A +A A + A + + +++ +Y R + Sbjct: 134 WQYGASLSIGWELDFWGRFSRAIESADAAFFAAQANREAALVLLHAQVADTYFTMRTAEA 193 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R+ IA + L K++ +++ F G T +L L + + + S IP LE + H Sbjct: 194 RLRIARENAQLQKRSYDIAQKLFKSGETDELDLQQAKTQYLGTLSSIPELESQIVLTHHA 253 Query: 233 ISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S LLG P Q + P + + +PADL+ RPD+R E ++A A+ Sbjct: 254 LSVLLGRPPGPLPELDAQPGKDGVVPLVNRAVLQDVPADLLLRRPDVRAAEYQMAAQSAQ 313 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESS 350 IG+AK+DLYPS+SL GS+ + + NT GP + IFD G+I +N+R ++ Sbjct: 314 IGVAKADLYPSVSLVGSLVWSASSLTGSPNTLALLAGPSVTWNIFDHGRITNNVRVQDAR 373 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 Q+ + +Q TV A +E ++A T++ + T L A ++S++L+ YR+G Sbjct: 374 LQQLTVAYQNTVREAAREADDAATALIAALQRDTILNDAQGAARRSLTLANTIYREGYSD 433 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +RA + + + + LY A+G G++ Sbjct: 434 FQRVLDAQRALFAQQDAYVVNRSNAVGDLIALYKALGGGWD 474 >gi|307823121|ref|ZP_07653351.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307735896|gb|EFO06743.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 492 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 126/478 (26%), Positives = 232/478 (48%), Gaps = 53/478 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIG--NSKNLINIDTLKWWESFNDTSLN 62 I++L LAGCTVGP+Y +P + +F S G ++ N+ + KWWE FND LN Sbjct: 10 IYALLTAQLAGCTVGPDYVRPEAKI-SNEFKESKGWKQAQPRDNVLSGKWWEIFNDPRLN 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFI 109 KL + N +I+QA + A+ + S ++ FP +S S++ + Sbjct: 69 KLEEQVAAANQSIIQAEAQYRQAQHLVQSAQSGFFPILNLTGTTNRFRAASGQSVAVSGV 128 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 NL G + W+ DL+G R +E++ + ++ A + +L+ + L Y + Sbjct: 129 RNL-FGVAGAIA--WEPDLWGSVSRQVEANTGSAQASAATLQALRLSSEATLADDYFQLK 185 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++ + +D Y + +++ ++ G +K +++ E +++S+ + L Sbjct: 186 ALDAQKALLDETVDAYSRTLQIIKNRYAVGMVAKSDVMQAETQLESVRAQAINLGVQRAK 245 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G E + + QP IP+++ P++L+ RPDI E+K+A + Sbjct: 246 LEHAIAVLIGKTPAEL--SLASAPLDVQPP-SIPVSL--PSELLERRPDIAAAERKIAAA 300 Query: 289 VAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK-LYLPIFDKGKIKSNI 344 A+IG+AK+ YPSL+L NG T DN F + +W+ GP L +FD G + Sbjct: 301 NAQIGVAKAAYYPSLNLAVTNGFQTSTLDNLFKAASRYWALGPAGAALTVFDGGAKNAQY 360 Query: 345 RRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++A +++TVL +EVE+ AL + E+K++ K A ++++L++ Sbjct: 361 KQAIDGFDANVAAYRQTVLTGFQEVEDNLAALRILEEEKQVQDKAVAA---ANQALALTI 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA--------KSYVDLYIAIGSGYN 451 Y+ G S L+++ + A +++ RQ A + V L A+G G+N Sbjct: 418 NQYQAGTISYLNVMTAQTA--------ALSNRQTAVQLHSNRMSATVQLVKALGGGWN 467 >gi|209518575|ref|ZP_03267395.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209501025|gb|EEA01061.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 475 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 114/466 (24%), Positives = 227/466 (48%), Gaps = 24/466 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTK--PH--MPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +++ + S + LA C V P PH L P +S+ ++ +N D WW F D Sbjct: 5 VMKLVASAAFLTLAACAVQPATHADLPHTVQTLAPAAWSVDAPQDSVNTDA--WWAQFGD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN--- 111 +++L++ L NL + A ER+ A++ + RA L P ++ AS + P Sbjct: 63 PVMHQLIESVLTGNLDVQAAAERVKQAQDLVTQNRAALVPELDANAGASTERQNTPPPLG 122 Query: 112 -LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 ++ G L + W D+FG +R + +S A + + A ++ +L + + +YID R Sbjct: 123 YVRRAGFG-LSASWTPDVFGGERLAVLASQAQVSGSEAALNQLRLALAANTAAAYIDLRW 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ I + + ++L+ + G +++L + + + +++ +++ IP ++ + + Sbjct: 182 AQAQLQILDDNEQIRSRALKLTQERLHYGLSTQLDVARAQNQLQDLQAQIPRVQSAVQHQ 241 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + I+ G P + + P P+ + P+D + +RPD+R + Sbjct: 242 LSLIAVYSGRTPESVDTLVLSDAREIPVPAQSAPVVL--PSDALLHRPDVRTAYAIVEQR 299 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNI 344 A++G++K+ YP +N + L +S+ G T +S PIF+ G+I +NI Sbjct: 300 AAEVGVSKAQRYPQFKINLTDGLLA-SSYLGLPTLTDNLFSAALNATSPIFNAGRITANI 358 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +ES +E + Q+T+L A+KE+E+ + + V +L A++ ++ LS Y Sbjct: 359 DASESRMRESQLGLQQTMLQALKEIEDNRSDLVSGAVQVQRLGGALDASNHALRLSTELY 418 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G S LD+LD + A + L+ A+R+ A S + LY ++G G+ Sbjct: 419 KGGASSFLDVLDAQEAYLRDSESLNQARREHALSAIALYRSLGGGW 464 >gi|167840602|ref|ZP_02467286.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 509 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 124/463 (26%), Positives = 217/463 (46%), Gaps = 36/463 (7%) Query: 11 FIVLLAGC-TVGPEYT-KP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++GC ++ P+Y KP P P S +++ L +D W F D L Sbjct: 32 LCAAVSGCLSLAPDYARKPPPVPASYPAYPGDPSGADARALGQLD---WRAYFVDPRLQA 88 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFI-PN---LKTNSTG 118 L++ AL N + A +R+ A+ RAD FP+ A+ ++ RF P L + G Sbjct: 89 LIETALANNRDLRIAVQRVEEARATYGIRRADQFPTIAANAAYLRFREPGGLLLPSPIIG 148 Query: 119 QLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA----R 168 +L S W+ID +G+ R +++ A LD+ A D ++ V LI DA Sbjct: 149 ELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRRAVTVSLIGQVADAYLALC 205 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ER+++ ++ + + ++ + ++ +GA SKL L + E ++ ++ L+++ + Sbjct: 206 AYGERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEILLQQAQTLGSQLQQARDV 265 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H + L+G A ++ P+L G+P++L+ NRPDI E +L + Sbjct: 266 QQHALDLLVGTSAAAPTPASLDDAS-IAPDL----APGLPSELLANRPDIVAAEYQLRAA 320 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P ++L GSI N F T W+F P L +PIFD G+ N++ Sbjct: 321 HANIGAARAAFFPRIALTGSIGTGSTELHNLFASGTTAWNFIPNLSVPIFDAGRNIGNLK 380 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + E +++TV A ++V +AL + + V Q + + L+ + Y Sbjct: 381 LANARRDEALAQYEKTVQAAFRDVADALAARHWLADQVRIAQETLATQSERARLAKLRYD 440 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G L++LD +R + L +R L S V LY A+G Sbjct: 441 SGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALGG 483 >gi|89900849|ref|YP_523320.1| RND efflux system outer membrane lipoprotein NodT [Rhodoferax ferrireducens T118] gi|89345586|gb|ABD69789.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodoferax ferrireducens T118] Length = 499 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 108/449 (24%), Positives = 208/449 (46%), Gaps = 23/449 (5%) Query: 17 GCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC++ P Y +P P+ P + ++ L W + DT L +L+++AL N Sbjct: 39 GCSMMPAYERPAAPIAAQWPDASTATKNQASTPAADLAWQDFVGDTPLRELIRLALANNR 98 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS---------DW 124 + A + + RAD FP+ + + P+ TN +G + S W Sbjct: 99 DLRVAVLNMEQVRAAYQIRRADQFPTLNLAATGLRQPS--TNGSGGISSVYTAGLAMASW 156 Query: 125 KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +ID FG+ + ES+LA ++ A+ ++I+ + +++ + E +++ + L Sbjct: 157 EIDFFGRVASLKESALAQYLASDEARQAAQTSLIAAVANTWLSLQTNDELLALTQRTLVT 216 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ L+ L+ GA S L + E+ + + + ++V+ ++ L+G P + Sbjct: 217 RDDSLRLTKLRLDNGAASALDFRQAESLTAQARATLAQQRRLRALDVNALTLLVGQPLPD 276 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L + F+ + G+P+DL+ RPDIR E++L + A IG A++ +P + Sbjct: 277 TLLATSATAPVFRD-----MPAGLPSDLLTRRPDIRQAEQQLIAANASIGAARAAFFPRI 331 Query: 304 SLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL GS + F + W+ P+ LPIFD G+ ++N+ + + +++ Sbjct: 332 SLTASAGSASSELSGLFKNGSWGWTLAPQALLPIFDAGRNQANLDASNAGRDIAVAQYEK 391 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 + +A +EV +AL + V Q ++ L+ + YR G S LDILD +R+ Sbjct: 392 AIQSAFREVADALAGRATLDEQVQAQQVQLDAEADRFRLADLRYRNGVASYLDILDAQRS 451 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ ++ K ++ V LY A+G G Sbjct: 452 LFAIQQGVAQTKLAYLQNQVTLYKALGGG 480 >gi|118578771|ref|YP_900021.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118501481|gb|ABK97963.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 474 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 214/470 (45%), Gaps = 46/470 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-------KWWESFNDTSLNKL 64 ++ LAGC++ P YT+P P+ P + G + L KW + F + L KL Sbjct: 17 LLFLAGCSMAPNYTRPEAPV-PQAWPSGPAYKGAASQALEPEAVQLKWEQFFINPQLRKL 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-------------------SYASIS 105 +K+AL N + AT + ++ RADL PS A S Sbjct: 76 IKLALDNNRDLRIATLNVEKSRAQYRIQRADLLPSINGNGNATMERTPSDLSSSGEAITS 135 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 H + NL +S +++DLFG+ + + + +L S V +L++++++ +Y Sbjct: 136 HSYTLNLGVSS-------YEVDLFGRVQSLKDQALEQFLSTEQAVRSVRLSLVAEVANNY 188 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +ER+ +A + L+ + + L +F+ GA+S+L L + + + S D+ Sbjct: 189 LTLAADRERLKLARETLESQRVSYNLIKSRFSAGASSELDLRQAQTSVDSARVDVARYTS 248 Query: 225 SFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ ++G P E L + F+ + ++ G+P+++++ RPDI E Sbjct: 249 QVAQDENLLALVVGGPVPAELL------PSGFEAAGMMRELSSGVPSEVLQRRPDIMEAE 302 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +P ++LN SI + D F + W F P+ LPIFD G+ Sbjct: 303 HLLKGANANIGAARAAFFPRITLNTSIGTSSDQLSGLFSPGSFAWGFAPQFTLPIFDFGR 362 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 K+ + AE +++++ +A +EV +AL + + Q V+ +S L Sbjct: 363 NKAGLTVAERDRDIYLAQYEKSIQSAFREVADALAVNGTITEQLDAQQSLVQATSESYRL 422 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S Y G S LD+L +R+ + L + V LY +G G Sbjct: 423 SQARYMGGISSYLDVLVSQRSLYTTQQSLIGVNLTKLSNLVTLYKVLGGG 472 >gi|70730166|ref|YP_259905.1| multidrug efflux MFS outer membrane protein [Pseudomonas fluorescens Pf-5] gi|61891733|gb|AAX56377.1| PltO [Pseudomonas fluorescens Pf-5] gi|68344465|gb|AAY92071.1| multidrug efflux MFS outer membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 498 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 111/493 (22%), Positives = 218/493 (44%), Gaps = 54/493 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLI---------NIDTLK 51 LR +L ++L + CTVGP++ P + P T + G + + Sbjct: 9 LRNGLTLAMLLAITACTVGPDFKAPAVTSPERWTDWHSGPPASSVPGKAPATTSQTADGN 68 Query: 52 WWESFND------------------TSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 WW+ F D T+L + ++ LQ+ + T ++ S Sbjct: 69 WWQVFGDPVLDQLQAQVREGSPDLHTALLRFAQVRLQRQIVASLETPEVS------FSAA 122 Query: 94 ADLFPSSYASISHRFIPNLKTNS--------------TGQLDSDWKIDLFGQ-RRHIESS 138 A S + ++R + L ++S D W++DL+G+ R E++ Sbjct: 123 ASRNRQSRYAPNNRMLEALGSDSDALEKVLTDPYSLYQAGFDVSWELDLWGRVSRLGEAA 182 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A +D A A +D L+V S+L +Y + R + + + Q + ++++ ++ +G Sbjct: 183 QAEVDGAAATLDDVLLSVSSELARNYFEVRTAQRQTRLLEQEAQILAAHLQVVAVQAREG 242 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 ++ + EA + S+ + IP + + I+ LLG + ++ +N Sbjct: 243 EEDGFAVERQEARLASLHAQIPGWKALHTQAGNRIALLLGEHPGALETLLAERPDNALSR 302 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNS 316 + +G+P DL R RPDIR + +L + A IG+A+++LYPS+ L Sbjct: 303 PLPNLQLGLPGDLARERPDIRAAQARLHRATAGIGVAEAELYPSVMLGADFGFESYKSGQ 362 Query: 317 FPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F +++ WS GP+L LP+FD+G+ + QE + + TVL A +EV++A++ Sbjct: 363 FADWSSRTWSVGPRLDLPLFDRGRRSKTVVLRTLEQQEAAVAFHRTVLAAWQEVDDAMSR 422 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + + + L+ + + ++ + + Y G S L+ L+ +R + + DL + QL Sbjct: 423 YHNEYQRAAHLKDSYDSKARTYEWTRVRYAAGEASYLEELEAQRTVLEAQRDLVNSDSQL 482 Query: 436 AKSYVDLYIAIGS 448 + +Y ++G Sbjct: 483 RTHLISIYKSMGG 495 >gi|300310691|ref|YP_003774783.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300073476|gb|ADJ62875.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 498 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 214/464 (46%), Gaps = 24/464 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN------IDTLKWWESFNDTSLNK 63 + +LL GCT+ P+Y +P P+ F+ +SKN + + W + F D SL + Sbjct: 19 MLAMLLGGCTLMPDYHRPDAPV-AAHFAGADSKNAAGASSAPVVADIGWRDVFTDPSLQQ 77 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNS---- 116 ++ +AL+ N + A I A+ RA LFPS A+ S R +L + Sbjct: 78 VIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSETASRTPGDLSSTGSALT 137 Query: 117 ----TGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T L S +++DLFG+ R + E +L + S ++++I+++ +++ Sbjct: 138 SRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQISLIAEVATAWLTLASD 197 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R+ +A L+ + L+ F G++S L+L + + ++S D+ + + Sbjct: 198 QDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVESARVDVESYTAQVDQDR 257 Query: 231 HNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G T L + + I G+P+DL++ R DI E+ L + Sbjct: 258 NALVLLVGKDLPTALLPQGLPDTRLAAASPLATIPPGLPSDLLQRRADIVQAERDLRAAN 317 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ YPS++L G+ + F G + WSF P++ LPIFD G ++N+ Sbjct: 318 ANIGAARAAFYPSITLTVNAGTASARLAGLFKGGSGSWSFVPQISLPIFDGGANQANLDI 377 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A S +++ + A +EV +AL N + + + V+ ++ LS Y Sbjct: 378 ATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALVQASDEAFRLSQARYHS 437 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L +LD +R + +L + + V Y +G G+ Sbjct: 438 GVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGGW 481 >gi|116625991|ref|YP_828147.1| RND efflux system outer membrane lipoprotein [Candidatus Solibacter usitatus Ellin6076] gi|116229153|gb|ABJ87862.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Solibacter usitatus Ellin6076] Length = 513 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 219/482 (45%), Gaps = 50/482 (10%) Query: 12 IVLLAGCTVGPEY-----TKPHMPLL----PTQFSIGNSKNLINI-DTL---KWWESFND 58 + L AGCTVGP+Y T+ +P + PTQF + D + KWWE F + Sbjct: 17 LFLSAGCTVGPKYHPPAATQAPVPTVYKESPTQFKETEGWKVARPGDAMLRGKWWEIFKE 76 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHR 107 LN L N I QA E AA+ I RA FP+ S A++ Sbjct: 77 PELNSLEDRLNIDNENIKQAFENFMAARALIREARAQYFPTLTTTPSFSRSASSANVGGV 136 Query: 108 FIPNLKTNSTG-----------QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLN 155 + N + LD W DL+G+ R+ + A + A ++ +L Sbjct: 137 TVANGSSGVAAVSGRQLTLYSVPLDISWAPDLWGRVRNTVREFQAGAQLSAADLENERLT 196 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + L Y + R I ++ ++ KK +EL+ ++ G +L +V+ + ++S+ Sbjct: 197 EQASLAQFYFEIRGQDALQKILNETVEADKKALELTQARYQTGVGDQLDVVQAQTTLESV 256 Query: 216 ESD---IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ I L F H I+TL+G PA+ F K P PI IG+P+ L+ Sbjct: 257 QAQAISIGLLRAQFE---HAIATLIGRPASSF-SIPVKPMTTAPP----PIPIGMPSQLL 308 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 RPDI E+ +A + A+IGIA + YP+L+L+ G+ + T + F + WS G Sbjct: 309 ERRPDIAAAERNMAVANAQIGIAYAAFYPTLTLSATGGAESSTLERLFTWSSRVWSIGGS 368 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + IFD G ++ + + ++ +++TVL A ++VE++L+ + + V K + A Sbjct: 369 VSETIFDAGLRRATVNQFIATYNAAVAGYRQTVLTAFQQVEDSLSGVRILSQEVVKQKQA 428 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ + ++L Y G L+++ + +L A+ S V L +A+G G Sbjct: 429 VQSAETQLTLQTARYETGIDPYLNVVIAQTTLLSNRQNLVTAQISEMTSAVQLILALGGG 488 Query: 450 YN 451 ++ Sbjct: 489 WD 490 >gi|237807128|ref|YP_002891568.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] gi|237499389|gb|ACQ91982.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] Length = 463 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 222/467 (47%), Gaps = 25/467 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I R I L +LLAGC++ P+Y +P P+ P + ++ + + W ++F D +L Sbjct: 2 IKRPIAFLVSLLLAGCSLAPDYQRPAAPI-PAGYDTSSASTIAAVKATDWQQAFTDPALQ 60 Query: 63 KLVKIALQQN----LTIL-----QATERIN-AAKENILSVRA----DLFPSSYASISHRF 108 KL+ ALQ N + IL QA RI AA+ L+ PS+Y+ + Sbjct: 61 KLIDTALQNNRDLRIAILNVEAYQAQYRIQRAAQLPTLTASGYQARQRIPSTYSGTADA- 119 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 I N + + G S +++DLFG+ + + + +L N + +L++I+ + +Y+ Sbjct: 120 ISNTDSATVG--ISAYELDLFGRVQSLKDQALENYLAQEETQRSTQLSLIANVATAYMTL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ + +A Q Y+++ +L ++ G +S L + + + ++S+ S + + Sbjct: 178 LADQDLLRLAEQTAKSYEQSYQLIEQRYQAGISSSLDVSQSRSNLESVRSSLAQYRRQVT 237 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ + + L+G T + L P+ IP+ L+ RPDI E L Sbjct: 238 LDKNALRLLMG---TNIPAGLSSGLPEQDLTLLSPLGADIPSTLLTRRPDILAAEHSLKA 294 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +P++SL GS++ + + F + W F P + LPIFD G + + Sbjct: 295 ANANIGAARAAFFPTISLTANAGSMSSSLNKLFDAGSGTWLFQPNISLPIFDWGSRDAQL 354 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + + T+++ + A +EV + L + + + + Q V+ ++ L+ Y Sbjct: 355 DVAKVQEKIEVATYEKAIQTAFQEVSDGLAAQDGYRDQLQAQQALVDANRTYYQLAQSRY 414 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G S L +LD +R+ E L + L + V L+ A+G G+ Sbjct: 415 EKGVDSYLTLLDAQRSLFSAEQGLVSTRLALLSNRVSLFKALGGGWQ 461 >gi|34557171|ref|NP_906986.1| putative outer membrane channel protein [Wolinella succinogenes DSM 1740] gi|34482887|emb|CAE09886.1| PUTATIVE OUTER MEMBRANE CHANNEL PROTEIN [Wolinella succinogenes] Length = 468 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 217/461 (47%), Gaps = 36/461 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQ 70 +LLAGC++ P+ + L P + + +K ++ + +WW F D L +L+K AL Sbjct: 13 LLLAGCSMSPK-----LELKPVEIPLALAKEAKTMEVINVEWWREFKDPLLEELIKEALV 67 Query: 71 QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN----LKTNST------- 117 N + A ++ A+ + RADL+PS + S + + + T +T Sbjct: 68 HNSDLRVAATNVSLARATLGGARADLYPSLDAEGSAGRKKTSDESYPVGTRATYNNFSLS 127 Query: 118 GQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L ++IDL+G+ R + S+ A L + A + L V S + Y + +E I I Sbjct: 128 GVLS--YEIDLWGRLRDSKRSAEALLLANEANQETIALAVASSVAEGYFNLITLREGIQI 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + +D Y+K+ + + GA S++ + + E++S ++++ E+ +S L Sbjct: 186 LKETVDSYQKSYDYRLKQHGLGAISEIVMEQSRVELESAKANLYLYERQESEAATALSIL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 LG E +F +P + G+P++++ +R DI+ E+KL + I Sbjct: 246 LGRTPKEIFE------KSFSLASVLPALPEVPAGLPSEILTHRSDIKVAEEKLKAANYSI 299 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A++ +P+LSL+G + D WS G L P+ + G+ + + A++ Sbjct: 300 GVARAAYFPTLSLSGVLGYQSAELDRLMRPSGEMWSLGGNLGAPLLNFGRTSAKVESAKA 359 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + I ++ T+ A EV++AL K + LQ + + ++ + +G + Sbjct: 360 QKESAEIEYEATIRQAFGEVKDALVKREVANKRLLSLQSQTTSQNRVLEIAQKRFDEGHF 419 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S LD+LD +R + L+ AK + A S V LY A+G G+ Sbjct: 420 SHLDLLDAQRGYLNARLALNSAKLETATSVVTLYKALGGGW 460 >gi|302188902|ref|ZP_07265575.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 472 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 110/463 (23%), Positives = 225/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF L L+GC++ P+Y +P P+ P + + + W + F D +L +L+ Sbjct: 9 LFAALSLSGCSLIPDYQRPAAPVAAHYPQSSAYAPALPGPLAADMGWRDLFRDPTLQQLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + +P T + G + S Sbjct: 69 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRLPASITQTGGPVTSG 128 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S A+ +L++++ + +Y+ R + Sbjct: 129 TYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEARRST-QLSLVASVATAYLTWRADQ 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 188 ELLALTQDTLMSYEKSLKLTTRSQQLGASSSLDLAQSRTSVESARASLATFQRQVAQDLN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N+++L+G ++ + + G+P+DL++ RPDI E +L + A Sbjct: 248 NLTSLVGTTVSD-----SAPDRPLSSDWLAEVPAGLPSDLLQRRPDILEAEYQLQSANAS 302 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F G + W F P++ +PIF+ G +++++ ++ Sbjct: 303 IGAARAAFFPSITLTANAGTSSTELSGLFKGGSGGWVFSPQINIPIFNAGSLRASLDYSK 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ A +EV + L + K+ + V+ +++ L+ YR G Sbjct: 363 IQKDISVSKYEKSIQTAFQEVSDGLAARQTYKRQLKAQSDLVQANQEYYRLAERRYRIGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R+ + L + + V+LY A+G G+ Sbjct: 423 DSSLTFLDAQRSLFSAQQTLITDRLSQLTAEVNLYKALGGGWT 465 >gi|327482264|gb|AEA85574.1| outer membrane lipoprotein [Pseudomonas stutzeri DSM 4166] Length = 488 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 111/456 (24%), Positives = 199/456 (43%), Gaps = 30/456 (6%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P++ P +P T FS + WW F+D L LV A+QQN + A R Sbjct: 23 PQHPAPQLP--DTWFSAAGAHPADAESLASWWRQFDDPQLTALVHRAMQQNHDVRLAMAR 80 Query: 82 INAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQ-------------------- 119 +++A+ + RA L PS S S ++I N + G Sbjct: 81 VDSARAQLRQSRAGLLPSFDLPGSASRQWIENDQDAEPGSPLAEFIPDDDPIAFDSWELA 140 Query: 120 LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W++DLFG R S A L SA AQ A+L V + Y+ R + + ++ Sbjct: 141 LQATWELDLFGATRARRDSAAQQLRSAEAQTVAARLAVAANTAQGYLQLRALQGQRALLV 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +++ ++ ++ L F G ++L + AE S+E+D+ L+ + TLL Sbjct: 201 EGIEVARELERIAGLLFHAGEVTRLDVEATSAERASLEADLDELDIHLAEAQLALDTLLA 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P + + P I G P DL+R RPD+ + +L + + A+ D Sbjct: 261 EPPGSTAARLAASAPV--PLAEQRIAPGQPIDLLRRRPDLIAEAARLDAAELQSLAARRD 318 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+P L++ ++ + ++ + G LP+ D + I A++ + Y Sbjct: 319 LFPKLAVQAAVGRSGFALGDAVSSASNFARVGATFGLPLLDYANRGAAIELADAEGETAY 378 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++ + A++EVE LT I ++ L + +++ L+ +Y G +L ++L Sbjct: 379 IAFEQALARALEEVERGLTRIAGQQRRHAALSRTRDHRERAHRLAQRSYELGEANLSEVL 438 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R + + LA + V LY+A+G G+N Sbjct: 439 DAQRGALQARQRALEGRTALATAQVALYVALGGGWN 474 >gi|148545995|ref|YP_001266097.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148510053|gb|ABQ76913.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 504 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 34/466 (7%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +++LAGCT VGP+Y KP P L P G S D +WW F D +L+ L Sbjct: 10 LLMVLAGCTQVGPDYEKPQTPWLGGWSTPMLEQAGRSA--AAPDLRQWWAVFADPTLDAL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTN- 115 + A N + A RI A+ + V+ +P S Y P+ + + Sbjct: 68 IAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSV 127 Query: 116 ---STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S+ D W+ID +G+ R IES+ A ++ A A L + +++ +Y R + Sbjct: 128 FWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRTAE 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++IA + +++E++ F G +L + + + ++ IP E + Sbjct: 188 ARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATQATIPEFENQLNALRN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + +LLG P PN + + +PA L++ RPDIR E+ +A A Sbjct: 248 VLCSLLGRPPGPLPQLAAGHGQLPLPNRAVLQD--VPASLLQRRPDIRAAEQAVAAQSAL 305 Query: 292 IGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNIR 345 +G+A++DLYP LSL GSI T N P +F GP L FD G+ K+ +R Sbjct: 306 VGVAEADLYPQLSLLGSIGWTFLSANHLPD-----TFDLVAGPSLIWNPFDYGRRKNTVR 360 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ Q+ +Q+ V A +E ++A + + + T + A + ++S++L+ YR Sbjct: 361 VEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYR 420 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G +LD ++ + + +++ S V LY A+G G++ Sbjct: 421 EGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466 >gi|323529743|ref|YP_004231895.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323386745|gb|ADX58835.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 486 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 110/481 (22%), Positives = 213/481 (44%), Gaps = 40/481 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMP--------LLP--TQFSIGNSKNLINIDTL--- 50 ++ + ++L+GC GP++ P P LP T S G + T Sbjct: 1 MKTFLVVCAIVLSGCAAGPDFHTPAAPDIQRYTQDTLPEHTATSNGPAGAAQRFATALRP 60 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN----------------ILSV 92 WW F +LN+LV L+ N T+ +A R+ A+EN Sbjct: 61 IPMWWREFESDALNRLVDEGLRHNPTLGEARARLREARENYTVLAGTTQFPNIDATFSGA 120 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 R + P+++ I H P + + + + D+FG RR +ES++A +D A +++ Sbjct: 121 RQKVDPAAF-GIPHVETPGPFSLFSASVSVSYVFDIFGGNRRALESAMAQVDYASYELEA 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L++ ++ + + ++++++ ++ D + + + G S L + Sbjct: 180 ARLSIAGNIVATVVRHASLQQQLALTRRLADAQAHQLSIMEARLAAGGVSPLDVRGQRTL 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +P L H ++ LLG ++ + + + L IP+ + P+ L Sbjct: 240 FAQTRASLPPLATQLAAADHELAILLGRAPSQ-ADFDELTFDALHLPLKIPVTL--PSTL 296 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 R RPDI E L + A +G+A ++LYP +L+ GS + G N W+ G Sbjct: 297 ARTRPDIMAAEALLHQASANVGVAAANLYPQFTLSAGMGSERTRIGDIVNGLNV-WNIGL 355 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F G++ + R AE++ + + +++ VL A+++V ++L ++ D + + Sbjct: 356 NLTQPLFHGGELHAKKRAAEAAYEGAFDNYRQVVLQALQQVADSLIALQNDARELQARAE 415 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A E + S+ ++ Y G S +LD ER + +D + A+ L+ A+GS Sbjct: 416 AAEEAQASLEIASRQYAAGGISQFALLDAERQCLQSSIDRTRAQANRFTDTAALFQALGS 475 Query: 449 G 449 G Sbjct: 476 G 476 >gi|39546293|ref|NP_459345.2| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992184|ref|ZP_02573282.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168465424|ref|ZP_02699306.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197264418|ref|ZP_03164492.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|195631997|gb|EDX50517.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242673|gb|EDY25293.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329478|gb|EDZ16242.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267992043|gb|ACY86928.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156962|emb|CBW16445.1| putative outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911381|dbj|BAJ35355.1| outer membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225066|gb|EFX50127.1| RND efflux system, outer membrane lipoprotein CmeC [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 485 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVMDESEINRRYEA 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL GS A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGS-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|296114176|ref|ZP_06832831.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] gi|295979252|gb|EFG85975.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] Length = 505 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 38/476 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN---SKNLI---NIDTLKWWESFNDT 59 +F ++LAGCTVGP Y +P LP +F+ + +K I + + +WW F D Sbjct: 11 GLFLSAALVLAGCTVGPRY-QPDRMKLPARFTEDDHPATKEEIEDTDRELKQWWHLFKDP 69 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRA-DLFPSSYA---------SISHRFI 109 L+KLV A+ N + A + I A+ I V+A +P A SI+ Sbjct: 70 ELDKLVDKAITGNYDLQAAGQHI-LAERAIRDVQASQWYPQMDADAGGGNVRYSINIENW 128 Query: 110 PNLKTNSTGQLDSD---------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 P N D++ W++D+FG+ RR +E+ +++ + + ++S+ Sbjct: 129 PIRPGNPANHPDANYLTYGMAGSWQLDVFGRIRRSVEAQKYAVEATIEERRALMVMILSE 188 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ R + R+ IA+ + + + +L++ + +G + + + + +AE+ S + Sbjct: 189 VASDYMMLRDQQLRLEIANNNIRVAQDAYDLTNRLYLEGVGNTMQIAQAKAELDSQTAAR 248 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPD 277 L+ H + L+G P T + +P +P +P+ ++ NRPD Sbjct: 249 EPLKTHISQITHALDVLMGQMPGTSEIEL-----KVARPLPKVPEFPATLPSIVLANRPD 303 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPI 334 IR E++ A++ A+IG+A S LYP+ S+ S A W F LP+ Sbjct: 304 IRTAERQYAEATARIGMAVSQLYPNFSIPISFNPNASVMSQMTEAATMSWQFLMMASLPL 363 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 GK+ S +R +++A+ + +++TVL KEVE+A+ + ++D++ L A E Sbjct: 364 MHGGKLTSQVRATQAAAEASRLNYRQTVLKGFKEVEDAMAAWHDDEEHTELLAKAAEDST 423 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + Y G L++L ER T + ++A+ + + ++LY AIG+G+ Sbjct: 424 LASERARKLYGAGLVGFLEVLTTERTTLNAQNAEAMARLERLQDAINLYTAIGAGW 479 >gi|170733971|ref|YP_001765918.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169817213|gb|ACA91796.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 507 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 38/476 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALFATGCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFI 109 E F D L +L++IAL+ N + + I AA+ RA LFP+ SI RF Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGSI-QRFP 124 Query: 110 PNLKTNSTGQ----------LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVI 157 + + TGQ L + W++DLFG+ + + + +LA L +AYA+ ++++++ Sbjct: 125 AGV--SQTGQPLISRTYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QASEISLV 181 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S++ Y+ + + + L + + +L+ L+F G S+L L + + +++ + Sbjct: 182 SQVADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALA 241 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ ++ + L+G P + L NL + G+P+DL+ RPD Sbjct: 242 NQQAQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPI 334 + E+ L + A IG A++ +P +SL G+ T F WSF P + LPI Sbjct: 299 VMQAEQTLLAANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 359 FEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQ 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 419 RRFDLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 474 >gi|254281742|ref|ZP_04956710.1| outer membrane heavy metal efflux protein [gamma proteobacterium NOR51-B] gi|219677945|gb|EED34294.1| outer membrane heavy metal efflux protein [gamma proteobacterium NOR51-B] Length = 440 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 109/415 (26%), Positives = 207/415 (49%), Gaps = 24/415 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPT-QFSI-GN--SKNLINIDTLKWWESFNDTSLNKLVK 66 + +L GC +VGP++++P +P L Q S+ GN + + D WW F D L+ L + Sbjct: 16 LCVLQGCASVGPDFSEPAVPWLDRWQSSLYGNVTAADREATDLTFWWSLFGDPELDVLQR 75 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD----- 121 A N ++ A R+ ++ + A P + G LD Sbjct: 76 AARADNPSLRIAGLRVIESRAVLQGAGAARLPQQQLVTGGANYVVQDQSGGGDLDFTQTD 135 Query: 122 ----SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + W++D +G+ R IES+ + ++ A A++ + + + +Y R + RISI Sbjct: 136 IGLSAAWELDFWGRFARGIESADSVFFASVANQQDAQVLLSAAVADTYYAYRTAERRISI 195 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + +++++++ F+ G S+L L + A + + IP LE++ + ++ L Sbjct: 196 AKENAAIQQRSLDIASALFSNGENSELDLQQARASYFATLASIPALEQALGQIENALAAL 255 Query: 237 LGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LG + L+ ++ +P+ G+PA+L+R RPD+R + A A+IG+ Sbjct: 256 LGRSPDDLPELNSRDQRLPAVKPDSLA----GVPAELLRRRPDVRSALWQAAAQSAQIGV 311 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYN--THWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A++D YPS++L G + D+ PG T + G L IFD G I+SN++ + Q Sbjct: 312 AEADFYPSVALLGGFGWS-DSGLPGTGSATSLTLGSSLRWNIFDWGLIQSNVQVQDVRLQ 370 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +++ VLNA +E++NA ++ + ++ L A+ ++S+ L++I YR+G Sbjct: 371 QAIESYRSVVLNAAREMDNAALAMVKTRERTELLVEALHAAERSLELALIQYREG 425 >gi|77917904|ref|YP_355719.1| outer membrane protein OmpK [Pelobacter carbinolicus DSM 2380] gi|77543987|gb|ABA87549.1| outer membrane protein OmpK [Pelobacter carbinolicus DSM 2380] Length = 474 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 116/467 (24%), Positives = 218/467 (46%), Gaps = 32/467 (6%) Query: 9 SLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-------LKWWESFNDTS 60 ++ LLAGC T+ P YT+P P+ P + G++ T + W E F + Sbjct: 13 AILTFLLAGCGTLAPRYTRPASPV-PVSWPEGSAYQPAAEGTETRSAAEVGWREFFANEK 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASIS--HRFIPNLKTN-- 115 L KL+++AL+ N + + +I A+ RADLFP+ S A +R +L T Sbjct: 72 LRKLMELALENNRDLRVSALKIEKARAQYRIQRADLFPTLSIAGKGSVNRTPASLSTTGK 131 Query: 116 -------STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYI 165 S G S ++ D FG+ R ++ L+ +A + A++ +I+++ +Y Sbjct: 132 RGTFEEYSVGLGMSSYEFDFFGRVRSLKDQ--TLEEYFATEEARRSAQITLIAEVATAYQ 189 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +ER+ +A Q L ++ EL+ +F G +KL + + + + S DI Sbjct: 190 TLAADRERLDLARQTLKSHQATYELTRSRFQAGLATKLEVRQAQTSVDSTLVDIARYTSL 249 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + L+G T+F + + + I G+P+++++ RPDI E +L Sbjct: 250 TAEDENALRFLVG---TDFSSALLPAALDEAVTDLKDIPAGVPSEVLQRRPDILAAEHRL 306 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P ++L S D + F G W+F P++ LPIF+ G++++ Sbjct: 307 MGANANIGAARAAFFPRITLTASGGFASDALSSLFEGATGTWAFAPRIELPIFNAGRLRA 366 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ ++ ++ + A +EV +AL + + VE +S LS Sbjct: 367 QLKTSKVDRDIYLARYEGAIQGAFREVADALAQRGTIDDQLLAQRSLVEATDESYILSEA 426 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R+G S L++LD +R+ + +L + ++V LY +G G Sbjct: 427 RFRKGIDSFLNVLDSQRSLYDAQQNLITIRLARLDNFVKLYRVLGGG 473 >gi|197249851|ref|YP_002145328.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213554|gb|ACH50951.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 485 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 219/465 (47%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + +++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIASYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|209543170|ref|YP_002275399.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209530847|gb|ACI50784.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 492 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 125/484 (25%), Positives = 216/484 (44%), Gaps = 56/484 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSL 61 A+ ++ C VGP Y P L P F + ++ + + WWE F+D L Sbjct: 24 AVALTMTLMTTACAVGPNYHAPDTHLQP--FHSAAAVDMRQVASTPPLDTWWEGFHDPEL 81 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISH-- 106 ++ + L QNL + A R+ ++ + A L P S I H Sbjct: 82 VRIEQRVLTQNLDLAAAIARVRQSRGAAEAATARLLPTLDFNPQASANRLSQEGLIGHVV 141 Query: 107 RFIPNLKTN-----STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKL 160 R IP+ + +G + W+IDLFG R + + + A + ++ V + Sbjct: 142 RTIPSFHRDYRTYDVSGT--ASWEIDLFGGLRRGQEAARDEAEAAQMERVGERITVAADA 199 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y R + R+++A + + + +EL + T G +++ L + EA ++S +P Sbjct: 200 ADAYFQIRGDQARLAVAEKQITVDAHLLELVRQRRTSGVSNERELAQAEALLQSARQTVP 259 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPA--------DL 271 L + ++ + L+G Q + L P I IPA D+ Sbjct: 260 LLRIALEAQLNRLDVLMG-----------AQPGTYAAELGTPSEIPAIPAIGGTNKPTDV 308 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSF 326 +R RPDI E++LA S A+IG A D YP LSL+G SI H + PG+ S Sbjct: 309 LRRRPDILAAERRLAASNARIGAALGDYYPKLSLSGILGFQSINPQHLFTAPGFQAVGSG 368 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + IFD GKI + +++A + E +Q TVL+A ++VENA T++ + ++ L Sbjct: 369 AIRWR--IFDFGKIDAEVQQARGANAEALARYQLTVLHAAEDVENAFTTLVQTEQRTDDL 426 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V ++ LS +++ G L D+LD +R + L++ + A++ V + A+ Sbjct: 427 LTEVASLTRARDLSQQSFQAGVIPLTDVLDADRQLLDSQDQLALNRANAARAAVSSFRAL 486 Query: 447 GSGY 450 G G+ Sbjct: 487 GGGW 490 >gi|78059728|ref|YP_366303.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77964278|gb|ABB05659.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 510 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 112/461 (24%), Positives = 212/461 (45%), Gaps = 31/461 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P Y +P P+ T + G S N + W E F D L +L+ Sbjct: 21 GCTMAPHYKRPDAPVAQTYPAGGVYATQPGATGARSANGQAATAIGWREFFVDPRLQRLI 80 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ---- 119 +IAL+ N + + I AA+ RA LFP+ + S + +PN T+ +G+ Sbjct: 81 EIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGIGTGSRQRLPNALTSVSGRNITT 140 Query: 120 -----LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Y+ + Sbjct: 141 TYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QAQEISLVSQVADQYLTLLSSDD 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + L+ LKF G S+L L + + +++ + + + ++ Sbjct: 200 LLKVTEDTLKSAQASYNLTKLKFDNGTGSELDLRQAQTVVETALASQQSQARDRAQALNY 259 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L NL + G+P+DL+ RPD+ E+ L + A I Sbjct: 260 LVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQAEQTLLAANANI 316 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G +N+ A Sbjct: 317 GAARAAFFPKISLTAAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGSNLANLDLAHV 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 377 QKRIEIASYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVD 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + + L A+ + V LY A+G G+ Sbjct: 437 SYLSVLTAQTDLYNAQQSLISARLARWTNLVTLYRALGGGW 477 >gi|300716165|ref|YP_003740968.1| type I secretion outer membrane protein [Erwinia billingiae Eb661] gi|299062001|emb|CAX59117.1| Type I secretion outer membrane protein [Erwinia billingiae Eb661] Length = 457 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 114/456 (25%), Positives = 224/456 (49%), Gaps = 37/456 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC + +P+ P Q+ +G S + WW +F D LN+LV+ AL+ NL Sbjct: 18 GCATEVDKAPGSLPI-PQQWRNQVGPSSAV----EANWWRAFGDADLNRLVEQALRNNLD 72 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------LDSDW 124 IL A R++ + + + D FP+ A ++ L ++ TGQ L +++ Sbjct: 73 ILTARSRVDQYRAELRGAQGDNFPTLDAGVAASHARAL-SSVTGQPYEYAVFQGLLQANY 131 Query: 125 KIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DL+G R I+++ A L + A A+L V S + Y+ E++ + L Sbjct: 132 EVDLWGARSSSIDAAKATLAAQQAAASAAELTVASSVASGYMTLVSLDEQLQVTQATLAS 191 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + +L+ ++ G TSKL V+ E+E+++ ++ +P L+ + +S L+G Sbjct: 192 REDSSKLAQRQYETGYTSKLEWVQAESELQTAKAQVPVLQHQIAQQENALSILVGMNP-- 249 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + +Q ++ P + +P++L++ RPDI E+ L + + +G +++ L PSL Sbjct: 250 --RAIARQGHHVAPQTLPSV---LPSELLQRRPDIVQAERLLLAADSSLGSSRAKLLPSL 304 Query: 304 SLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +L + + D+ F WS G + P+ ++ + + + + +S + Sbjct: 305 NLTATGTMQSSVLHQLIDDPF----RLWSIGGSVLAPLLNREALTAQVDVSMASRNQALY 360 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++++ V NA EV N L +I+ K+ + +LQ ++ +++ +S Y+ G S LD LD Sbjct: 361 SYEKVVRNAFSEVNNDLDAIDRYKQQLAELQQQQQVVSEALRISRNRYQNGYASYLDELD 420 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +R ++++ K L + +DLY A+G G+NP Sbjct: 421 AQRTLFTTQLNVVQVKNNLLLAQIDLYRALGGGWNP 456 >gi|167846085|ref|ZP_02471593.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei B7210] Length = 401 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/339 (27%), Positives = 173/339 (51%), Gaps = 14/339 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 38 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 97 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 98 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 157 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 158 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 215 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 216 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 271 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 272 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 331 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +D+LD ER ++ QL V LY A+G G+ Sbjct: 332 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGW 370 >gi|330810537|ref|YP_004354999.1| transporter outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378645|gb|AEA69995.1| Putative transporter, outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 465 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 215/466 (46%), Gaps = 36/466 (7%) Query: 11 FIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDTSLNKLVKIA 68 + LL GC + P+Y +P P+ ++ K ++ D ++W F D+ L +L +A Sbjct: 11 ILTLLGGCMNLAPQYERPEAPVAEQWLPAASTPKGQVSAD-IEWQSFFTDSRLARLQSLA 69 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNS---------T 117 L N + A + A+ RA+ PS AS+S H P +N+ + Sbjct: 70 LSNNRDLRLAVLNVEKAQAQYRIQRAESLPSIDASVSGTHSRTPGSLSNTGSAATTHDYS 129 Query: 118 GQLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 QL S +++DLFG Q +E LA ++ + ++++++++ +++ Sbjct: 130 AQLGLSSYEVDLFGRVQNLQDEALEDYLALTETRRS----TQISLVAEVATAWLTLAADN 185 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER+ +A + L + EL+ G +S LS+ + + ++S D E + + Sbjct: 186 ERLHLAQETLRSQQATYELTQRSHALGGSSGLSVAQAQTTVESARVDAAAYESQILQDRN 245 Query: 232 NISTLLGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + L+G E L Y++ + Q +P + P+ L++ RPD+ E L + Sbjct: 246 ALRLLVGSDIPEELLPGAYLESAAALVQ----VPAEL--PSSLLQRRPDVLAAEHTLKSA 299 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG A++ +PS+SL + + F + W+F P + LPIFD G ++ + Sbjct: 300 NIDIGAARAAFFPSISLTANAGSSSSALSGLFKSGSGAWTFAPSISLPIFDAGSNRATLD 359 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ + Q T+Q+T+ +A KEV +AL + + + Q + +KS LS YR Sbjct: 360 SAKTEREIQVQTYQQTLQSAFKEVADALAERSTLDRRIEAQQALTDASRKSFELSDALYR 419 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+ LD +R+ + DL + + V LY +G G+N Sbjct: 420 GGSQSYLEALDAQRSLYSAQQDLITLRLTEQSNRVTLYKVMGGGWN 465 >gi|237812183|ref|YP_002896634.1| outer membrane efflux protein OprA [Burkholderia pseudomallei MSHR346] gi|237506224|gb|ACQ98542.1| outer membrane efflux protein OprA [Burkholderia pseudomallei MSHR346] Length = 516 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 110/475 (23%), Positives = 215/475 (45%), Gaps = 45/475 (9%) Query: 17 GCTVGPEYTKPHMPL-------------------------LPTQFSIGNSKNLINIDTLK 51 GCT+ P Y +P P+ +P ++ + Sbjct: 37 GCTLAPRYERPAAPVPAHYWSTAAGAPREAGPAAAGGPRAMPDARRGDAGRDARDARLDD 96 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 97 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 156 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISK 159 + P L+ ++T L S ++IDLFG+ + + +++LA +A AQ + ++++I++ Sbjct: 157 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAV-RISLIAE 215 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 216 VASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASK 275 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 276 AALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIR 331 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 332 QAEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFA 391 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + Sbjct: 392 GGRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAER 451 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 452 LRLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 506 >gi|167911296|ref|ZP_02498387.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 373 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 10 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 69 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 70 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 129 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 130 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 187 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 188 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 243 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 244 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 303 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 304 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 343 >gi|332768458|gb|EGJ98642.1| putative efflux pump outer membrane protein ttgC [Shigella flexneri 2930-71] Length = 458 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 36/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPVMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGS--WSGNLKGDSATTREFS 123 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 124 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 181 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 182 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 241 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 242 LLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 297 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 298 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 357 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 358 QQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARALYQHGAVSY 417 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + Y LY A+G G+ Sbjct: 418 LEVLDAERSLFATRQTLLDLNYA-RQVNEIY--LYTALGGGW 456 >gi|255323203|ref|ZP_05364338.1| 30S ribosomal protein S12 [Campylobacter showae RM3277] gi|255299726|gb|EET79008.1| 30S ribosomal protein S12 [Campylobacter showae RM3277] Length = 458 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 116/462 (25%), Positives = 212/462 (45%), Gaps = 41/462 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + LAGC+ +P +P + T+F +I +WW+ F D +LN LV AL++N Sbjct: 11 LFLAGCSF-----RPEIPEVDTKFESTYKFETSDIRD-EWWKEFGDENLNSLVASALEKN 64 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------------- 119 + A + A ++ ADLFPS ++ + K S+G+ Sbjct: 65 TDLRTAYLNLQKAAASLGISEADLFPSVNLNVGYT-----KAKSSGETYTKQPQTRYRTS 119 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L ++IDL+G+ R +ES+ A+L++ A+L++ S + SY R + Sbjct: 120 QVNLGLSYEIDLWGRVRNSVESAKASLNATKLDYATARLSISSSVAKSYFALVALNMREA 179 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L Y++ + L + G ++ + ++ +A ++S + + ++ S + +++ Sbjct: 180 VLKDTLKTYEETLALRKTQLDLGGINETTYLQSKAAVESAKVSLLEVQTSLSQALTSVAI 239 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L G E L S Q +P ++ G+ AD++ R D+ L + A Sbjct: 240 LTGKSNDEIL------SGAVQSAKMLPKEPEVSAGVSADILLRRSDVAKAYADLNATNAL 293 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+D PS+SL G + +N F WS G L IFD G+ K+N+R E Sbjct: 294 IGVAKADYLPSISLTGLFGFSSVDFENIFISNANTWSIGGSLVQKIFDYGRTKNNVRITE 353 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ Q + ++ + A+ EV +AL + K + +++ + +K L+ + +G Sbjct: 354 TNEQIAAVAYEAAIKKALGEVRDALNNRKNAKLTLNQVKELLPSQEKIYKLAKDQFEEGY 413 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD +R V + A L S VD+Y A G G+ Sbjct: 414 TGHLELLDAQRNLLSVRLQDIAANLSLIDSVVDVYKAFGGGF 455 >gi|167894655|ref|ZP_02482057.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 380 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A Sbjct: 17 FDASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALAV 76 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + D + + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 77 ALADEQRDVVALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 136 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Sbjct: 137 -DAPGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQ 194 Query: 299 LYPSLSLNGSIAL--THDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSA 351 YP +SL G + TH HWS FGP + LPIF+ G + +N+R +++ Sbjct: 195 FYPDVSLTGQVGTRATHAREL----AHWSHLFYAFGPSVSLPIFEGGALVANLRLSQAQQ 250 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ VL A+++V+NAL + D+ L+ A + + L+ +YR G S Sbjct: 251 AQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSF 310 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD ER ++ QL V LY A+G G+ Sbjct: 311 IDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 350 >gi|257139187|ref|ZP_05587449.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 521 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 110/479 (22%), Positives = 214/479 (44%), Gaps = 49/479 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF------------------------------SIGNSKNLIN 46 GCT+ P Y +P P+ P + GN + + + Sbjct: 37 GCTLAPRYERPAAPV-PANYLPAAAGAPRAASPAAAGSGARDAQPASDARGGGNVQEMHD 95 Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 + W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 96 VRLDDWRAYFTDPALRALIDAALANNRDLRIATLRIEEARGLYGVARADRLPSIDGSLGY 155 Query: 107 R----FIPNLKTNSTGQLD------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 + P L+ ++T L S ++IDLFG+ + + +++LA + A+++ Sbjct: 156 ERTRLYDPVLRESATSSLYRASVGLSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARVS 215 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I+++ +Y+ R +++ +A + L L+ ++ G ++ + L E + S Sbjct: 216 LIAEVASAYVRERALVDQLKLAERTLAARDATYALTQRRYAAGTSTAIELRTAEMLVASA 275 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + LE+ + L G +F + + ++ G+ +DL+ R Sbjct: 276 RASKAALEREHTQAASALKLLAG----DFTAALPADAPALDELAVARVSPGLSSDLLEQR 331 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDIR E++L + A IG A++ +P ++L GS++ F ++ W+F P+L L Sbjct: 332 PDIRQAEQRLVAANANIGAARAAFFPRIALTTDIGSVSDAFSGLFSAGSSVWTFAPRLTL 391 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q Sbjct: 392 PIFAGGRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGA 451 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 452 DAERLRLAERRYGSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 510 >gi|46446529|ref|YP_007894.1| putative outer membrane protein [Candidatus Protochlamydia amoebophila UWE25] gi|46400170|emb|CAF23619.1| putative outer membrane protein [Candidatus Protochlamydia amoebophila UWE25] Length = 537 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 115/438 (26%), Positives = 204/438 (46%), Gaps = 45/438 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WWE F+D LNKL + AL+ N T+ A ER+ ++ RA LFP+ S S+ Sbjct: 95 WWEIFDDPILNKLEEQALELNHTLGAAFERVIQSRAIARIDRASLFPTVNFSPSYARSGM 154 Query: 112 LKTNSTGQ--------------------------------LDSDWKIDLFGQRRHIESSL 139 L+ N+ G+ D ++++DL+ + + S Sbjct: 155 LQKNALGKAIPSSQQNNPPDAMFSNLPQTVRGIQSQYFLSFDFNYELDLWSKLTNTYESA 214 Query: 140 ANLDSAYAQVDIAKLNVISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A Q ++ L ++ I S Y R + +I + ++ +K +++ +F G Sbjct: 215 IFRSQASTQAYLSILLTLTADIASNYFQLRDLDSQQAILQRTIEARQKAFDINQARFNAG 274 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + + + E+ SD+ +++ + + I+TL G PAT F S F P Sbjct: 275 LIVYSDVSRAKVELARARSDLANIQRLRSLQENIIATLTGTPATVF-------SIKFNPI 327 Query: 259 LYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-- 314 +P +I G+P++L+ RPDI E+ LA S A+IGIA + +P+++LN L Sbjct: 328 NALPPSIPTGLPSELLYRRPDIAEAERNLAASYAEIGIAYASFFPTMNLNAGFGLESPFV 387 Query: 315 NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 +S + W G L +FD G+ +N+ +S +E +QE VL A ++VE++L Sbjct: 388 HSLISWKARLWEIGLNLIQTVFDGGRNCANLAFTKSRFRETLANYQENVLIAFQDVEDSL 447 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ + L+ V+ K+++ LS + Y +G + LD++D ER + E + I Sbjct: 448 VNLRQKALQAEALEAGVKAAKETLKLSQMRYERGLINYLDVVDAERTLLETEQNTVIVLG 507 Query: 434 QLAKSYVDLYIAIGSGYN 451 + S + L A+G G+N Sbjct: 508 ERYISTIRLIKALGGGWN 525 >gi|312958256|ref|ZP_07772778.1| outer membrane efflux protein [Pseudomonas fluorescens WH6] gi|311287522|gb|EFQ66081.1| outer membrane efflux protein [Pseudomonas fluorescens WH6] Length = 480 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 116/455 (25%), Positives = 215/455 (47%), Gaps = 31/455 (6%) Query: 20 VGPEYTKPHMPLLPTQFSIG----NSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLT 74 VGP+Y P + G + KN ++ WW+ + D L++LV+ A+ N Sbjct: 20 VGPDYQVPDTAAVNRADLQGPLPLDGKNEVSAPVPADWWKLYQDPRLDELVRQAMASNTD 79 Query: 75 ILQATERINAAK-ENILSVRADLFPSSYASISHRF------------IPNLKTNSTGQLD 121 + A + A+ + + A + + + + R +P S G + Sbjct: 80 LRVAAANLQRARFQTQQAESAGGWSAGAKAEAQRLQESGEAFLLADKVPVDNIGSLG-IT 138 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + ++ DLFG +R IES+ A+ D+A A DIA++ +++ ++ SY E ++IA+Q Sbjct: 139 TSYQFDLFGTLQRGIESAQASADAAQAAADIARITLVADVVRSYTQVCAANEELAIANQS 198 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 LDL ++ L+ G + + + + + KS+ +D+P E + + + +S LL P Sbjct: 199 LDLQAQSTRLTQRLRDAGRGDETQVTRSQTQYKSLRADMPRYEAARQAGLFRLSMLLAKP 258 Query: 241 ATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 L + + + PN+ + +G A L++ RPD+R E++LA + A+IG+A Sbjct: 259 ----LDQLPAGTGSCAELPNIAQLLPVGDGAALLKRRPDVRQAERQLAAATARIGVATGA 314 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 LYP +++ G++ L + P N W FGP + + G ++ I AE++ Q Sbjct: 315 LYPDIAIGATVGTVGLLDNLGQPATN-RWGFGPMISWTVPTNGA-RARIHEAEAATQGAL 372 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + VLNAI+E + L + L A + +++ + ++ GR S L L Sbjct: 373 AHFDGVVLNAIRETQTGLAQYAAMLQRRDALADAEQSARQAADQTHRFFQAGRESFLADL 432 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R + L+ A Q+A S +DL++A+G G+ Sbjct: 433 QATRTYTAMRAQLAAANTQVAMSQIDLFLALGGGW 467 >gi|269102536|ref|ZP_06155233.1| putative outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162434|gb|EEZ40930.1| putative outer membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 544 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 241/488 (49%), Gaps = 48/488 (9%) Query: 4 LRAIFSLF-IVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 LRA ++ + L C+V GP + +P Q+ + + ++ D WW+ FND +L Sbjct: 6 LRACMTILPLCSLTACSVLGPNFESLQPKAIPAQWQLVDQQD--QADVALWWQQFNDPTL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKT--NST 117 + LV++A +QNL + A RI A+ + + +P + + N K+ N+ Sbjct: 64 DHLVEMAAEQNLDLEAAGLRIIQARAALGISQGLQYPQVQQVSGNLAKAYQNEKSFDNAA 123 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A + ++ A + + +++ +YI+ R F+ERI + Sbjct: 124 LSFDAGWELDVWGKYARGIESAEALMYASIASYRDIAVTITAEVARNYINYRTFQERILL 183 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ +++ G ++L + + + ++ + ++ +P+L+ + + ++ L Sbjct: 184 SKRNIEIQQRVVHITQVQYDSGNVTELDVQQAKNQLYTTKAALPSLKIAMLQARNALAVL 243 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY-----------------------IP-INIGIPADLI 272 LG +E + + + + +Y IP ++ I A+L+ Sbjct: 244 LGVLPSEVDALLGSDAIDKKIAVYDSRYAVGKKAALNGTDKYSLVPHIPKVDNQIDANLV 303 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF------ 326 RPD++ E + AKIG+A++ LYPS SL GSI + +++ P + Sbjct: 304 MRRPDLQVAELQAHSQSAKIGLAETALYPSFSLLGSIGI--NSTVPSDRSFSFSDSLMLV 361 Query: 327 -GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKI 382 GP IF G++K+NIR + QE + + VL A++EV NAL S + E K + Sbjct: 362 AGPSFSWNIFQYGRVKNNIRLEDVRFQESLTNYNKKVLVAVQEVTNALESYDLYTEQKAL 421 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V L Sbjct: 422 --RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRSEDSYAQIKGNVANQVVAL 478 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 479 YKALGGGW 486 >gi|156933870|ref|YP_001437786.1| hypothetical protein ESA_01696 [Cronobacter sakazakii ATCC BAA-894] gi|156532124|gb|ABU76950.1| hypothetical protein ESA_01696 [Cronobacter sakazakii ATCC BAA-894] Length = 474 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 109/451 (24%), Positives = 216/451 (47%), Gaps = 26/451 (5%) Query: 16 AGCTVGP-EYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 AGC G E +P + + P + ++G S WW +F+D++LN+ V AL+ N Sbjct: 15 AGCHAGNVEQARPSLIIPPAWRAAVGPSSPTEGF----WWRNFHDSALNRYVDQALRYNS 70 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDW 124 +L A ER+N + + + D FP+ A S +P G L++ + Sbjct: 71 DVLLARERVNQYQAQVQAALGDRFPTLDAGFSAGRSRSQSAATGLPVYGDLYKGSLNASY 130 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +D++GQ +++ A+L++ A A L V S++ YI E++ + L Sbjct: 131 NVDIWGQYASAADAAKASLEAQKAAAAAANLTVASQVASGYITLLALDEQLRVTQATLSA 190 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + ++L+ ++ G +S+L L++ E+E+++ + IP ++ + +S L+G Sbjct: 191 REDALKLAKRQYETGYSSRLELMQSESELRATRAQIPQIQHQITQQENALSILIGQNPGP 250 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + F + I +P+ L+ RPDI E+ L S A++ +A++ L P + Sbjct: 251 I-----ARGGEFDALSPLTIPSQLPSSLLNRRPDIVQAEQTLVASDAQLNVARARLLPGI 305 Query: 304 SLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L S +L +N+ P + WS G + P+ ++ + + + S + +++ Sbjct: 306 NLTASGSL-QENTLPELLANPLRLWSVGASVLAPLLNREALSAQVDVTTSQKNQALYSYE 364 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 TV NA KEV ++L ++ + + +LQ + ++++ ++ Y+ G S LD LD R Sbjct: 365 STVRNAFKEVNDSLDAVQRLGEQLVELQAQEQAAQETLRIAHNRYQNGYASYLDELDARR 424 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++++ K L + VDLY ++G G+ Sbjct: 425 TLFSAQLNVVQVKNNLLLAQVDLYRSLGGGW 455 >gi|205351667|ref|YP_002225468.1| outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855832|ref|YP_002242483.1| outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271448|emb|CAR36262.1| putative outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707635|emb|CAR31919.1| putative outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626698|gb|EGE33041.1| putative outer membrane efflux lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 485 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 219/465 (47%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ + IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLT-EVAIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|84385544|ref|ZP_00988575.1| putative outer membrane protein [Vibrio splendidus 12B01] gi|84379524|gb|EAP96376.1| putative outer membrane protein [Vibrio splendidus 12B01] Length = 502 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 124/481 (25%), Positives = 224/481 (46%), Gaps = 52/481 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLK-------WWESFNDTSLNKL 64 +LL GC VGP+Y +P + T +S G+ +N D + WW FND +LN+L Sbjct: 16 LLLTGCAVGPDYDEPQTTMAETFLYSQGD----VNQDGVSQIEQHNHWWTQFNDPTLNQL 71 Query: 65 VKIALQQNLTILQATERINAA--------------------------KENILSVRADLFP 98 V QN+ + A ERIN A EN S+ +F Sbjct: 72 VADVQSQNIPLKLAAERINMANSYKSVVESFKVPTINVGGGYYNYQLSEND-SLLGPVFG 130 Query: 99 SSYASISHRFIPNLKTNSTGQL---DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN 155 +S A S + L+ G W++DLFG R +S+ A + A++ + LN Sbjct: 131 ASDAVESATGMSLLEAQHDGGFLGASIAWEMDLFG-RIDKQSNAATIRVEQAEIFQSGLN 189 Query: 156 --VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + + +I +Y+ R +ER +IA + + K+ +EL G S+L L + +A + Sbjct: 190 TLITADVIHNYLQYRGAQERKAIALENISDQKQTLELVTKVVRSGYGSELDLAQAKAMLA 249 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLI 272 + ES +P LE + +++ ++ LLG T + Q+ + F P + I G+P+DL+ Sbjct: 250 ATESIVPQLEIAEQVHKQRMAVLLGESLT---NVNQRLAGEFTLPRMNDVIPTGLPSDLL 306 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPK 329 RPDIR E ++A ++G + ++ YP L G+ +T D+ F + W+ Sbjct: 307 EQRPDIRIAELEMAAINEELGASIANRYPKFFLTGTPGVTAGSFDDLFSSDSFGWAASAG 366 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + +FD G+ ++ + E+ + + +Q +V +A EV+++L + ++ ++ A Sbjct: 367 ISWNVFDGGRGEAMVEMNEARFRSAALNYQHSVDSAFAEVDSSLFAYGRSQENQKRIDEA 426 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S + Y+ G L +LD +R ++ AK Q A + + +Y A+G Sbjct: 427 TRAVDNAVSKAKSLYKAGLVDYLSVLDAQRQQKAMQDRQVAAKLQTANTTIAVYKALGGD 486 Query: 450 Y 450 + Sbjct: 487 W 487 >gi|19352357|ref|NP_598115.1| OprJ protein [uncultured bacterium] gi|19070024|emb|CAD24340.1| OprJ protein [uncultured bacterium] Length = 475 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 216/470 (45%), Gaps = 29/470 (6%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 + R + + +AGC++ P Y +P P+ + + D L W D L+ Sbjct: 6 LFRPALLVLTLTVAGCSLAPNYQRPEAPVAASWTPTVEATGSFAADVLDWKTFIIDPQLH 65 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP---------- 110 ++V AL N ++ QA I AA+ RAD PS + A+ S + +P Sbjct: 66 RVVDAALSNNRSLRQALLDIEAARAQYRVQRADRLPSINANATGSRQRLPADLSSSGRSD 125 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + G +++++DLFG+ R++ ES+L + ++++I+++I +Y+ Sbjct: 126 VSSSYQVGPGLTEYEVDLFGRVRNLSESALETYLATEEATRATQVSLIAEVIEAYLTRDG 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + R+++ Q L + ++EL + G + L + + +++ + + + Sbjct: 186 AQRRLALVEQTLKTREDSLELISRRRQAGTATALDYQEALGLAEQAKAERESTLRLLQQT 245 Query: 230 VHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLA 286 + + L+G P A L + S L + +I G P+ LI RPDI E +L Sbjct: 246 DNALVLLVGTPDANSLLPAAPRDS------LLVLQDIAPGTPSTLIERRPDILASEHRLK 299 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A IG A++ +P LSL GS+ + F G + WSF P L LPIF G+ ++N Sbjct: 300 ARNADIGAARAAFFPRLSLTGSVGSSSTELSGLFDGGSRAWSFAPSLSLPIFAGGRNRAN 359 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + AE ++ T+ A +EV +ALT+ + ++ + + +M+L+ Sbjct: 360 LDLAEVRKDAAVAAYEGTIQVAFREVADALTATDTLRREEAARRALADSSVAAMTLAKAR 419 Query: 404 YRQGRYSLLDILDIERATAKVEVDL--SIAKRQLAKSYVDLYIAIGSGYN 451 Y G L LD +R+T +V L +RQ+A VDL+ ++G G+ Sbjct: 420 YDGGVDDYLRYLDAQRSTFGNQVTLIQISTERQIA--LVDLFKSLGGGWE 467 >gi|33596279|ref|NP_883922.1| outer membrane efflux protein [Bordetella parapertussis 12822] gi|33602060|ref|NP_889620.1| outer membrane efflux protein [Bordetella bronchiseptica RB50] gi|33566048|emb|CAE36945.1| probable outer membrane efflux protein [Bordetella parapertussis] gi|33576498|emb|CAE33576.1| probable outer membrane efflux protein [Bordetella bronchiseptica RB50] Length = 473 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 120/460 (26%), Positives = 212/460 (46%), Gaps = 28/460 (6%) Query: 17 GCT-VGPEYTKPHMPLLPTQ-----FSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIA 68 GC VGP+Y P F + + D L WW + D L+ LV+ A Sbjct: 17 GCAAVGPDYRLPEQAAAKRPAAAAPFVQAREQAVYRQDELPPHWWRLYQDRQLDSLVEQA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNST-- 117 L N + A + A+ +A P+ +AS P L+ + Sbjct: 77 LAANADLRVAAANLERAQAVTRQAQARQQPTVDVSAAPAFGHASGVQELQPGLRPQDSWS 136 Query: 118 --GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G L +++DLFGQ RR IE++ + +A A D A++ V ++ +Y D ++ Sbjct: 137 YSGGLGVSYQLDLFGQIRRAIEAAQDDAQAAQAAYDAARVTVAAETARAYADLCAAGMQL 196 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 A + + +++++ G + L + + ++++ +++++P + R ++ ++ Sbjct: 197 DSARHSVQVQQQSVDAVQRLLAAGRGTTLDVARARSQLEQLQAELPPFQAGQRTALYRLA 256 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G+ E + P L I +G A L+R RPDIR E+ LA + A+IG+ Sbjct: 257 ALTGHAPAELPQSLLACVRP--PRLAQAIPVGDGAALLRRRPDIRQAERSLAAATARIGV 314 Query: 295 AKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +DLYP +SL S A + PG WS GP + + D G ++ I +AE+S Sbjct: 315 ATADLYPKISLGLSGASAGPAALFGEPG-TFSWSVGPLISWTLPDTGAAQARIAQAEAST 373 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + TVLNA++E E+AL + L+ A E ++ + + +R G+ Sbjct: 374 KGALARFDATVLNALRETESALVTYARQLDRDAALRAAREQGAQAAAQARQLFRLGKTDY 433 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD ER A E L+ ++ QLA + +++A+G G+ Sbjct: 434 LTVLDAERTLAGNESALAASQAQLAGDQIAVFLALGGGWE 473 >gi|83720933|ref|YP_442964.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83654758|gb|ABC38821.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 544 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 110/479 (22%), Positives = 214/479 (44%), Gaps = 49/479 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF------------------------------SIGNSKNLIN 46 GCT+ P Y +P P+ P + GN + + + Sbjct: 60 GCTLAPRYERPAAPV-PANYLPAAAGAPRAASPAAAGSGARDAQPASDARGGGNVQEMHD 118 Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 + W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 119 VRLDDWRAYFTDPALRALIDAALANNRDLRIATLRIEEARGLYGVARADRLPSIDGSLGY 178 Query: 107 R----FIPNLKTNSTGQLD------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 + P L+ ++T L S ++IDLFG+ + + +++LA + A+++ Sbjct: 179 ERTRLYDPVLRESATSSLYRASVGLSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARVS 238 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I+++ +Y+ R +++ +A + L L+ ++ G ++ + L E + S Sbjct: 239 LIAEVASAYVRERALVDQLKLAERTLAARDATYALTQRRYAAGTSTAIELRTAEMLVASA 298 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + LE+ + L G +F + + ++ G+ +DL+ R Sbjct: 299 RASKAALEREHTQAASALKLLAG----DFTAALPADAPALDELAVARVSPGLSSDLLEQR 354 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDIR E++L + A IG A++ +P ++L GS++ F ++ W+F P+L L Sbjct: 355 PDIRQAEQRLVAANANIGAARAAFFPRIALTTDIGSVSDAFSGLFSAGSSVWTFAPRLTL 414 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q Sbjct: 415 PIFAGGRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGA 474 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 475 DAERLRLAERRYGSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 533 >gi|17549818|ref|NP_523158.1| putative outer membrane drug efflux lipoprotein [Ralstonia solanacearum GMI1000] gi|17432074|emb|CAD18750.1| putative outer membrane drug efflux lipoprotein [Ralstonia solanacearum GMI1000] Length = 483 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 106/438 (24%), Positives = 207/438 (47%), Gaps = 28/438 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 A+ + LL GC++ P Y +P M + T+ ++ + WW+ FND L+ Sbjct: 10 ALAASLTTLLTGCSLAPPYARPAMDVPAHWQTEAPWRAAQPADDAPKGPWWQRFNDPQLD 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------------- 109 +L++ AL +N ++ A + A+ RA L P AS S + Sbjct: 70 RLMEQALHENQSLKVAVSNLEQAQALTRVARAGLLPQVTASTSGARLRTSADRPLSSYSS 129 Query: 110 PNLKT---NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 P + T + + D ++ DLFG+ R +I ++ A+ + A A ++ +L + +++ ++ Sbjct: 130 PTMSTVQNDFVVRADVSYEADLFGRVRGNIANAAASEEQAAANLENVRLLLAAQVATTWY 189 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R I + Q L L +K ++ + G S L L + +A + S + L+K Sbjct: 190 SLRETDAEIDVVQQGLALQRKALDFVASRHQDGVASGLDLAQQQALVDSTATQAELLQKQ 249 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++TL+G PA F ++ QP + I + +P+D+I RPD+ E+ Sbjct: 250 RTQYEHALATLIGTPAPAF--HIAPAPLAGQPPV---IPVALPSDVIERRPDVAAAERGA 304 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 A + A +G+A++ +PS+ LNG + F + WSFG ++ +FD G+ ++ Sbjct: 305 AAANASVGVARAAFFPSIMLNGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRA 364 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A + Q +++ VL A++EVE+ L+ + + + + +VE +K ++ Sbjct: 365 RVDFANAGYQGAIANYRQAVLGALQEVEDGLSGLQALDRAAAQARASVESARKVYDIASA 424 Query: 403 NYRQGRYSLLDILDIERA 420 Y G + LD++ +++ Sbjct: 425 RYEGGLATSLDVIAAQQS 442 >gi|33591994|ref|NP_879638.1| outer membrane component of multidrug efflux system [Bordetella pertussis Tohama I] gi|33571638|emb|CAE41129.1| outer membrane component of multidrug efflux system [Bordetella pertussis Tohama I] gi|332381410|gb|AEE66257.1| outer membrane component of multidrug efflux system [Bordetella pertussis CS] Length = 497 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 209/461 (45%), Gaps = 34/461 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTLK--WWESFNDTSLNKLVKIALQQNLT 74 C VGP+Y P P + + + L + D L+ WW D L+ L+ +AL +NL Sbjct: 25 CAVGPQYQAPT----PAPVKLASPEQALFSADRLQREWWRQLQDARLDALIGLALARNLD 80 Query: 75 I----------LQATERINAAKENILSVRADLFPSSYASISH-----RFIP-----NLKT 114 I QA R+ A+ + D +P+ A+ + + P NL Sbjct: 81 IGLALARNLDIRQAQARLREARAALDEKELDRWPTVTAAGGYTRSLSQINPGPDQRNLAQ 140 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI-AKLNVISKLIPSYIDARHFKER 173 + D+ W+IDLFG+ + + A D A A +L V+++L +Y + R ++R Sbjct: 141 SYRAGFDATWEIDLFGRLQRRAEAAAARDQAAAADLAQTRLVVVAELARNYFEMRGAEQR 200 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A L ++ + ++ G L AE+ + + LE R+ ++I Sbjct: 201 LAVARANLATQQETLRVTAALVETGRGYAGDLASARAELAGTRALLAPLETQRRLAQYHI 260 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L E Q+Q P L + IG A L++ RPD+R E+ LA + A +G Sbjct: 261 AVLAAMRPAELGELRQEQP--LAP-LAAQLPIGDVAMLLQRRPDVRAAERLLAATNADVG 317 Query: 294 IAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++LYP + L G IAL + + ++ P + P G +++ +R ++ Sbjct: 318 AITAELYPRIDLGGFLGFIALRGGDLGQASSKAFALAPTISWPALHLGSVQAQLRAGQAR 377 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ L AI+EVE ALT ++++ + L + +++ L+ YR+G Sbjct: 378 HDAARARYEQVALQAIEEVEGALTRYGQNQQRLRDLLDSATQSQRAADLAQTRYREGAAP 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + + ++ ++ + S V LY A+G G+N Sbjct: 438 YLTVLDAQRTLLRAQDAVAQSESESYTSLVALYKALGGGWN 478 >gi|152970039|ref|YP_001335148.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954888|gb|ABR76918.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 459 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 114/463 (24%), Positives = 229/463 (49%), Gaps = 33/463 (7%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 ++R + ++ L GC + + +P + + P + +G + + + WW +F+D+ Sbjct: 1 MIRPVALAIVLALVGCQSADVQRAQPTLTI-PAAWRADVGPASPVEGV----WWRNFHDS 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLK 113 +LN+ V AL+ N +L A ER+N + + + LFPS AS++ L Sbjct: 56 TLNQYVDQALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLTGTRARTQSAATGLP 115 Query: 114 TNST---GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +ST G L + + +D++G R ++ A+L++ A A L+V S + Y+ Sbjct: 116 IHSTLYKGGLTASYDVDIWGANRSAANAAGASLEAQKAAAAAANLSVASSVAVGYVTLLS 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + Q L + L+ +F G TS+L L++ ++E++S + IP L+ Sbjct: 176 LDEQLRVTQQTLTSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQ 235 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG A + + Q P L +P + P+ L+ RPDI E++L Sbjct: 236 ENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIAQAERQLVA 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A + +++ L PS++L + +L D + P + WS G + P+ ++ + + Sbjct: 288 ADATLASSQAQLLPSINLTATGSL-QDRTLPDLLDNPLRLWSLGGSILAPLLNRQALNAQ 346 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + + + ++++TV +A KEV ++L +I+ + +T+LQ + ++++ ++ Sbjct: 347 VDVSMAQRNQALYSYEKTVRSAFKEVNDSLDAISRYGEQLTELQEQETVAQETLRIAQNR 406 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 YR G S LD+LD +R ++ + K L + +DLY A+ Sbjct: 407 YRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIDLYRAL 449 >gi|95931176|ref|ZP_01313899.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] gi|95132782|gb|EAT14458.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] Length = 500 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 126/484 (26%), Positives = 221/484 (45%), Gaps = 48/484 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP----LLPTQF---------SIGNSKNLINIDTLK- 51 A+ + ++ LAGC VGP++ +P P PT ++G+ +N+I + L Sbjct: 6 ALIGMCLLTLAGCAVGPDFQRPAPPDVIGYTPTPLATNLNSSPTTLGDPQNIIKAERLTK 65 Query: 52 -WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASIS--- 105 WW + L+ L+ AL++N T++ A + A+E + + RA L+P ++ Sbjct: 66 HWWRAMGADKLDMLISEALERNPTLMAAEANLRQAQE-LYAARAGSTLYPQLEGNLGGQR 124 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDI 151 RF P + GQ + L+ G RR +E+ A D Q++ Sbjct: 125 QRFNPG----TLGQTGEAREFSLYNAGVGVRYTFDLAGGNRRALEALAARSDYQQFQLEG 180 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L +++ ++ + I K + I IL + +EL+ + G + L+ + Sbjct: 181 ARLTLVANIVTTAITQASLKRQTEIIENILKSQENQLELTRERIRLGHGEPDDALALQTQ 240 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ + +P L + N H ++ L+G P L + +F L + + IP++ Sbjct: 241 LEQTRAKLPPLRYQLQQNEHFLAVLVGKAPGESLLPSFTLE--DF--TLPPELPLLIPSE 296 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI E L S A+ G+A S LYP L+L+ GS ALT F G + WS Sbjct: 297 LVRARPDILGAEALLHASNAEYGVAISKLYPQLNLSADLGSQALTTGALFGGGSAVWSLV 356 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL A++ V + L ++ D K + L Sbjct: 357 GQLTQPLFNPG-LPAEKRAALAAFDAAAANYQSVVLEALRNVADVLRALENDSKRLEALS 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A KS+ + YR G S D+L ++ + E+DL+ + + + V A+G Sbjct: 416 AADSASGKSLESTQRRYRLGTASYYDLLIAQQQRLQTELDLTEGQAKRLVNTVVFCQAMG 475 Query: 448 SGYN 451 G N Sbjct: 476 GGLN 479 >gi|186473313|ref|YP_001860655.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184195645|gb|ACC73609.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 484 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/432 (24%), Positives = 211/432 (48%), Gaps = 18/432 (4%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +S+ + ++ D +WW F D +++KLV + L NL + A ER+ A E Sbjct: 39 PDAWSVDAPNDTVDAD--QWWSQFGDPTMHKLVDLVLNDNLDVKAAVERVKQAGEVTKQQ 96 Query: 93 RADLFP----SSYASISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS 144 RA L P + A+ + P +K G L + W+ D+FG R + + Sbjct: 97 RAALSPQLDAGATAAYERQNTPPPLGYVKQAGAG-LTASWQPDVFGGERLAVLAAQAQAT 155 Query: 145 AYA-QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 ++ +L + + +YID R + + I ++ D+ + ++L+ + G +++L Sbjct: 156 GRQWALNELRLALAANTAAAYIDLRWAQTQRQIINENEDIRSRALKLTQQRLKYGLSTQL 215 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP 262 + + + +++ +++ IP + + + ++ I+ G + + P+ +P Sbjct: 216 DVARAQNQLQDLQAQIPKINSTIQHDMSLIAVYSGRTPESVDSLLLSDAQPIPVPSQSVP 275 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPG 319 + + P++ + RPD+R + A++G+A++D YP SL +G +A ++ Sbjct: 276 LTL--PSEALLRRPDVRTAYATVEQRAAEVGVARADRYPKFSLRLSDGILASSYLGMPTL 333 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + +S PIF+ G+I ++I ES +E + Q+T+LNA+K++E+ + + Sbjct: 334 TDNLFSAALNATAPIFNAGRITAHIEENESRMRESQLNLQQTMLNALKDIEDTRSDLVNG 393 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 V KL A++ ++ LS Y+ G S LD+LD + A + L+ AKR+ A++ Sbjct: 394 DAQVAKLAGALDASGHALRLSTELYKGGASSFLDVLDAQEAYLRDSESLNQAKREHAQAA 453 Query: 440 VDLYIAIGSGYN 451 V LY ++G G++ Sbjct: 454 VALYRSLGGGWD 465 >gi|254427260|ref|ZP_05040967.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] gi|196193429|gb|EDX88388.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] Length = 457 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/416 (24%), Positives = 207/416 (49%), Gaps = 15/416 (3%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 VLL+GC + P + P Q+ + + +WW+ FN LN+LV AL Sbjct: 4 FVLLSGCAMQSGLEAPEQSM-PAQWLNQQQASEAMVHHPQWWQQFNSAELNQLVDQALAA 62 Query: 72 NLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNS-TGQLDSDWKI 126 N +L AT R+ A + + LFP+ + S S F + + S + + +++ Sbjct: 63 NTDLLAATARVEQADAQLSQAGSALFPALGLGAGGSRSGVFGESGSSESYNASVSASYEL 122 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DL+GQ R+ + + A+L ++ D +L VI+ ++ +Y+ + ++ ++++ + L L + Sbjct: 123 DLWGQLRNSRDVARASLLASQFSRDTVQLTVIASVVNTYLQVLYLQDNLALSEENLALAQ 182 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + +++ K GA S L + + + ++++ +P+L R + + ++ L+G E Sbjct: 183 QVLDVVQAKVENGAVSPQDLAQQKTVVANVKAQLPSLRHQLRQSRYALAVLVG----EMP 238 Query: 246 HYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 Q NL +P I G+P ++ RPDI + L + + A++D +PS++ Sbjct: 239 QAFQVGGGTL-SNLQLPEIQAGLPDQVLAQRPDIAQAQASLMAADYSVAAARADYWPSIT 297 Query: 305 LNGS--IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 L GS A + +S + +S G L +FD G + I +++++ QEQ ++ T+ Sbjct: 298 LTGSGGYASSALSSLFNGDALYSLGVSLAQTLFDGGARNARIDQSKAAWQEQVASYTGTL 357 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 L A++EVE +L+++ + + A + +++ ++ + Y++G L D+L + Sbjct: 358 LVALQEVEQSLSNVQGLAEQQQYREEAYQQAEEAYRVAQVRYQEGETELTDVLSAQ 413 >gi|145590168|ref|YP_001156765.1| RND efflux system outer membrane lipoprotein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048574|gb|ABP35201.1| RND efflux system, outer membrane lipoprotein, NodT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 513 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 119/489 (24%), Positives = 218/489 (44%), Gaps = 50/489 (10%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 I R+ F I +L+ C VGP++ +P P T SK L+ + Sbjct: 9 ISRSYFFPLICAGVLSACAVGPDFKQPDPPKTSTYTETTLSKQLVTAPGVPGGSSQEFIE 68 Query: 51 ------KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI-LSVRADLFPSSYAS 103 +WWE + L+ L+K AL+QN + A + A+EN+ + FPS AS Sbjct: 69 GADIEAQWWELYKSPELDALIKKALEQNPNLGAADAALRVAQENVNAQIGGQYFPSVSAS 128 Query: 104 IS--HRFIP-------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYA 147 S + P NL S ++ +K+D+FG RR +E + A + A Sbjct: 129 GSATRQLQPSAIYGLPYGSDTYNLYNTS---INVTYKLDVFGGARRAVEGARAQAEVAQY 185 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q++ A L++ + ++ + + ++ +IL E++ + T G SK+ + Sbjct: 186 QLEGAYLSLTANVVTGAVKEAALRAQMQATEEILKAQTNLAEVTEKQLTIGTVSKVDVTS 245 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--IN 264 + + + D+ T E++ + ++ L+G P+ + + L +P + Sbjct: 246 QRTLVSNSQVDLFTYERNLAFARNQLAVLVGELPSNANIAKFDLST------LQLPQKLP 299 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYN 321 + +P+ L+R RPD+R E +L A +G+A ++L P ++ GSI ALT F + Sbjct: 300 LSVPSSLVRQRPDVRAAEAQLKAQNAFVGVATANLLPQFNITGSIGSAALTSAALFGPNS 359 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 W+ G + P+F G++ + R A +S ++ +Q TVLNA +EV NAL ++ + Sbjct: 360 ALWAIGGGILQPLFQGGQLLAQRRGAIASYEQAAYQYQATVLNAFQEVANALRALETGAQ 419 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + A +++ L Y+ G S L +L + + +V A+ Sbjct: 420 ALKAASDAERYSYETLDLVQHQYKLGTASYLAVLYYQNLYQQAKVKSVSAQATRFSDTAA 479 Query: 442 LYIAIGSGY 450 L+ A+G G+ Sbjct: 480 LFAALGGGW 488 >gi|264676315|ref|YP_003276221.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262206827|gb|ACY30925.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 478 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 116/472 (24%), Positives = 219/472 (46%), Gaps = 44/472 (9%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNKL 64 LLAGC VGP++ P +P QF+ ++ + +W F D L +L Sbjct: 8 LATLLAGCAVGPDFRTPELPQAGAQFARAEPSAVLKQASPETGSDAAFWRQFQDAQLTQL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR-------FIPNLKT 114 V+ AL+ N + A R++AA+ + R D P+ S ++ R P + Sbjct: 68 VEQALRANQDLRAALARLDAAQALLRESRLDQLPTLTLSGQALQQRRSESQAMGGPRSQR 127 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + + +++ W++DLFG+ RR+IE+ A L ++ A + ++ + +++ SY D R +++R Sbjct: 128 SYSAGINASWELDLFGRVRRNIEAGSAELRASAADMAALQVAIAAQVAASYADLRGWQQR 187 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + + L L+ G+ + L + +A++++ S IP L+ + H + Sbjct: 188 LQLAEANAANQQDTMRLVQLRLAHGSGTDFDLARAQAQLETTRSRIPVLQARIAVAQHRL 247 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G P + P P G PA+L+R RPD+ E +L + A++ Sbjct: 248 AVLTGQVPEALIAALNAPAALPQLPETIAP---GTPAELLRRRPDVAAAEARLHAATARV 304 Query: 293 GIAKSDLYP----------SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 G+ ++L+P S G++ S F G + WSF D G+ Sbjct: 305 GVTTAELFPRLSLGGLLGSSALSTGALFEAGSASRSVFLGVD--WSF--------LDVGR 354 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ I +E+ AQ +Q++VL A+++ ENAL + + L A E ++ L Sbjct: 355 VRARIAASEAGAQVALAQYQQSVLLALEDTENALVLLTRTRSEDAHLAQAAEQRARAEQL 414 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G L ++LD +R + + ++ + ++ V LY A+ G+ Sbjct: 415 AQRRYRLGSVGLYEVLDAQRDLYAAQDAAADSRARGLRAAVALYQALAGGWE 466 >gi|311106699|ref|YP_003979552.1| efflux transporter outer membrane factor lipoprotein 6 [Achromobacter xylosoxidans A8] gi|310761388|gb|ADP16837.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 6 [Achromobacter xylosoxidans A8] Length = 473 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 217/458 (47%), Gaps = 27/458 (5%) Query: 17 GCT-VGPEYTKPHMPLLPTQFS---IGNSKNL-INIDTLK--WWESFNDTSLNKLVKIAL 69 GCT VGP+Y P + Q + ++N D + WW ++D L+ LV+ AL Sbjct: 17 GCTTVGPDYQVPAGSVAERQSAQTPFTEARNAAFRQDAVPGHWWRLYDDPVLDGLVEKAL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------------IPNLKTN 115 N + A+ + A+ + +A P+ + S F PN + Sbjct: 77 AANTDLRVASANLERAQAAVKESQAQQQPTIGVNASPTFGHVSGLQELQPGINPPNRWSY 136 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S G S +++DLFGQ RR +E++ + +A A D ++ V ++ +Y + ++ Sbjct: 137 SMGASVS-YQLDLFGQIRRAVEAASGDEQAAQAAYDATRVTVAAETARAYANMCAAGMQL 195 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + A + + K++++ G + L + + ++++ +++++P + R ++ ++ Sbjct: 196 ASAQHSVQVQKQSLDAVDRLQRAGRGTTLDVTRARSQLQQLQANLPPFQAQQRTALYRLA 255 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L +E + + + P L I +G A+L+R RPDIR E+ LA S A+IG+ Sbjct: 256 ALTSQTPSEISPALLQCAQA--PRLTETIPVGDGAELLRRRPDIRQAERTLAASTARIGV 313 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A +DLYP +SL S A S G WS GP + I + G ++ I A++S + Sbjct: 314 ATADLYPKISLGLSSASGGPASMFGDRGTFSWSVGPLISWTIPNTGAAQARIAEAQASTK 373 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + TVLNA++E E+AL L+ A + ++ S + ++ G+ L Sbjct: 374 AAAARFDATVLNALRETESALVVYARQLDRDAALRAARDQSAEAASQASRLFQYGKTDYL 433 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER A E L+ ++ L+ + L++A+G G+ Sbjct: 434 TVLDAERTLATNESALAASQADLSNDQIALFLALGGGW 471 >gi|319779583|ref|YP_004130496.1| RND efflux system, outer membrane lipoprotein CmeC [Taylorella equigenitalis MCE9] gi|317109607|gb|ADU92353.1| RND efflux system, outer membrane lipoprotein CmeC [Taylorella equigenitalis MCE9] Length = 461 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 115/447 (25%), Positives = 207/447 (46%), Gaps = 12/447 (2%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L C P+Y P + L P F+ NS N +++ LKW F D +L KLV++AL+ N Sbjct: 13 AFLTACNFAPKYETPDISL-PDTFN-NNSTNQVSVANLKWESFFVDQTLKKLVQLALENN 70 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNST---GQLDSDWKID 127 + QA+ + AA+ ++L P AS +P T G ++++ID Sbjct: 71 HDLKQASLNVLAAQSQYGISVSELIPKVGASFRQNVSEVPRAGIQRTYIVGLGINNFEID 130 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 +G+ R ES+L + + A++N+I+ + +Y E I IL+ Y Sbjct: 131 FWGKIRNQNESALQKYFATESAQKAAQINLIAAVANTYFAYAVLSENEKIIRDILNSYNT 190 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 L KF+ G S+L L + ++ + + +S + K+ + + + + G + L+ Sbjct: 191 TYNLIKQKFSVGLASQLELNQAQSSVLTAQSKLEETLKNKALTYNALQLMTGISFKDVLN 250 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + Q+N F + + G+P+ L+ RPDI E L + A IG A++ +PS+SL Sbjct: 251 -LNNQTNVFNKKIVQDLPPGLPSSLLTRRPDIIASEHNLKSTYADIGAARAAFFPSISLT 309 Query: 307 GSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G L + F + W+F P + LPIF G +K+ A + + +++TV Sbjct: 310 GLFGLVSGDLNKLFTPNHETWNFTPTVTLPIFAAGALKNAKDLATVRKEIAVVNYEKTVY 369 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A KEV +AL +I + + +L +++ L+ + Y G + L + + Sbjct: 370 TAFKEVNDALITIESSENQLKNSSEQAKLMEQNSKLAFMRYEAGIDNFLQVQQAQLGVLN 429 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + Q ++ V+LY A+G G+ Sbjct: 430 SKQAYLNSLLQSLQAKVNLYKALGGGW 456 >gi|186473146|ref|YP_001860488.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184195478|gb|ACC73442.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 484 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 114/475 (24%), Positives = 220/475 (46%), Gaps = 46/475 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF---------SIGNSKNLINIDTL--KWWESFND 58 LF + L GC VGP++ P P P+ + G ++ L + D WW F Sbjct: 7 LFALALCGCAVGPDFHAPAPPDAPSYMRETLPATTQAAGAAQTLASSDHALPTWWTQFQS 66 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHR---------F 108 +LN+LV ALQ + T+ +A ++ A+EN + A FP+ A++S Sbjct: 67 DALNRLVDTALQHSPTLDEARAKLVQARENYVAQAGATQFPAIDATLSGSRQKVDPAAFG 126 Query: 109 IPNLK-----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 IPN++ T + + +D+FG RR +E+ LA +D ++ A+L + ++ Sbjct: 127 IPNVQNPGPFTLFNASVSVSYALDVFGGNRRALEALLAQVDYQTYELQAARLTLAGNVVS 186 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + I ++++++ Q+ + + + + ++ G ++L + + + IP L Sbjct: 187 AVIRRASLQQQLALTRQLANAQARQLTIVEGRYAAGGVAQLDVRTQHTLLAQTRAQIPPL 246 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP----NLYIP--INIGIPADLIRNRP 276 E H ++ LLG ++ NF L++P + + +P+ L R RP Sbjct: 247 ETQLAQADHQLAILLGIVPSQ---------ANFDDITLDALHLPDAVPVTLPSTLARERP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E L + A +G+A ++LYP ++ GS ++ G N W+ G L P Sbjct: 298 DIRASEALLHQASADVGVATANLYPQFIVSAGFGSERTRIEDVVNGLNV-WNIGLNLAQP 356 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G++++ R A+++ + ++++TVL A+++V + L ++N+D + A Sbjct: 357 IFHGGELRAKKRAAQAAYDAAFASYRQTVLKALQQVADTLHALNDDAHALQARDDANAEA 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + S ++ Y G S ++D +R + +D + A+ L+ A+G Sbjct: 417 QASAKIAQAQYAAGGVSQFGLIDTQRQALQTALDRTRAQADRLVDTAALFQALGG 471 >gi|148554867|ref|YP_001262449.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148500057|gb|ABQ68311.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 480 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/480 (23%), Positives = 215/480 (44%), Gaps = 42/480 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +R I L +++ + C++ P P P+ T + + + + W F D L Sbjct: 1 MRRIAMLALLMTSACSMNPRLDIPKPPVA-THYPDATAAEPASAAAIDWRTMFGDPRLQA 59 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNST---- 117 LV +AL N + +T + AA+ R + P + S + + IP ++ Sbjct: 60 LVDLALANNRDLRVSTLNVEAARAQFRVARGAMLPQVDANGSYTRQRIPTSTASAGIGGA 119 Query: 118 ---------------GQLDSD-----WKIDLFGQRRH-----IESSLANLDSAYAQVDIA 152 GQ ++ ++IDLFG+ R E LA+ + + A Sbjct: 120 TGGGTGAGAPSGFEFGQYSANAALTSFEIDLFGRLRSQSQAAFERYLASDEGRRS----A 175 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ +I ++ +Y+ R E++++ + + + +++++ + S L L + E ++ Sbjct: 176 RIALIGSVVDAYLAERLAAEQLALTERTMADWNSSLDITRRQHEAKQVSGLELAQAEGQV 235 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +D+ +++ + + L+G P L ++ QP + + G+P+DLI Sbjct: 236 QQAAADLAAGQRALAQAGNALQLLVGAPIPADLPAPIPLAD--QP-IMTQLPAGLPSDLI 292 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 NRPDIR E++L + A +G A++ +P LSL G T D+ F G N WSF P+ Sbjct: 293 ANRPDIRQAERELVAANADVGAARAAFFPRLSLTGLFGFTSLAFDDLFKGDNRSWSFTPQ 352 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + PIF G ++ +R A+ +++ + +EV + L + + + A Sbjct: 353 ISQPIFRGGSLRGELRLAKVQKSIAIANYEKAIQTGFREVADGLAGRATFARQLDAQRKA 412 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ ++ LS + YR G S L++LD +R+ + + +RQ S LY A+G G Sbjct: 413 VDAAERRARLSDMRYRVGFDSRLELLDAQRSEYAAQQAMLELRRQELSSATGLYRALGGG 472 >gi|317406702|gb|EFV86865.1| efflux system outer membrane component [Achromobacter xylosoxidans C54] Length = 495 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 52/488 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL---LPTQFSI--GNSKNLINIDT----------- 49 A+ + V LAGC++ P+Y +P P+ P Q + G + + T Sbjct: 10 ALSAFVAVALAGCSLAPDYKRPDAPVSGNWPDQPKVQYGAYATPMTLGTQPASAVAPQAG 69 Query: 50 -----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 L W E F D L +L+++AL N + A +R+ A+ R +PS A I Sbjct: 70 TPAADLGWREFFRDPRLQRLIELALVNNRDLRVAVQRVEEARAQYGVQRGAQWPSIGAGI 129 Query: 105 S---HRFIPNLKTNSTGQLDSDWK---------IDLFGQRRHIESSLAN--LDSAYAQVD 150 RF N++ G + S ++ IDLFG+ R + + L + AQ Sbjct: 130 QGQRQRFPENMRQPGAGSVTSSYQAGIGLTTFEIDLFGRLRSLSEAAYQQYLSTEQAQKS 189 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + +I + SY + R + ++ + + L +++ L +F G S+L L + ++ Sbjct: 190 T-HITLIGAVAQSYFNLRAAQVQLELTQRTLASRQESYNLVKRRFDGGVASELDLNQSKS 248 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + + +D+ L + V+ + LLG P E L + + L + G+P+D Sbjct: 249 LLDTASADLAQLARVQAQAVNALVLLLGTPLPEDLP---PPATFGRDQLLATVPAGLPSD 305 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFG 327 L+ RPDI E L + A IG A++ +P++SL G + D F G +WSF Sbjct: 306 LLERRPDILAAENNLKSANANIGAARAAFFPTISLTGLFGVASPSLDTLFKGGQGYWSFS 365 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + P+F G I+ + A++ +++T+ A +EV +AL + + Sbjct: 366 PSITTPLFAGGSIREGLNLAKARDNIAVAQYEQTIQQAFREVSDALAGEATYGAQLDAQR 425 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK--SYVDL 442 + +++ LS + Y G S L + TA+V+ L++ + LA + V+L Sbjct: 426 ALQDSSARTLELSNLRYTNGIDSYLQV-----QTAQVDFFNAQLALVQTGLAALINRVEL 480 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 481 YKALGGGW 488 >gi|332185876|ref|ZP_08387623.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332014234|gb|EGI56292.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 476 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 109/445 (24%), Positives = 203/445 (45%), Gaps = 15/445 (3%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTILQ 77 VG +Y P +P + S ++ + + WW ++D L++LV+ A N + Sbjct: 20 VGRDYRPPALPANSSAGSFVSAAAGTDSRPAQDQWWRLYDDPVLDRLVRQAFAANTDLRI 79 Query: 78 ATERINAAKENILSVRADLFPSSY--ASISHR-FIPNLKTNSTGQLDSD------WKIDL 128 A ++ A+ + PS+ +SH +P + Q D W++DL Sbjct: 80 AAANLDRAQAVLREAGVARLPSTSLSGGVSHGDAVPGQGGSGHAQWSYDAALNVAWEVDL 139 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 G+ RR IE++ A+ ++ + + + ++ +Y DA + +A + + + ++ Sbjct: 140 SGRIRRSIEAARADAQASATAQNRVAVTIAAETARAYADACALAQAEEVARRSIGIAQRG 199 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 ++L+ + GA ++ + + A + + +P + + ++ LLG P + Sbjct: 200 LDLTETRQGAGAATQFDVERSAAALAETRATLPVFTGRRQARLFELAALLGLPPAQVPED 259 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 ++ P IP+ G A L+ RPD+R E++LA A+IG+A +DLYP +SL G Sbjct: 260 ARRCVVPPAPVATIPVGDG--AALLARRPDVREAERQLAADTARIGVASADLYPRISLGG 317 Query: 308 SIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 S ++ G ++ +S GP L + ++ I +AE+ Q + +L A+ Sbjct: 318 SGGFFRNDQVKGSDSFSFSIGPLLSWSFPNIAVARARIAQAEAQTQGSLARFDGIMLTAL 377 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 KEVE AL + + L AV + L+ YR G S L++LD +R E Sbjct: 378 KEVEQALAAYAAAGRRAEALDEAVRRADAAYRLADRRYRAGAISFLELLDSQRQLVSDES 437 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 S A + L + VDL+ A+G G+ Sbjct: 438 ARSEAIQTLGSTRVDLFKALGGGWQ 462 >gi|330818161|ref|YP_004361866.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] gi|327370554|gb|AEA61910.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] Length = 508 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 35/469 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDT 59 F ++ GCT+ P Y +P P+ + S G +S N + W F D Sbjct: 13 FALVATGCTMAPHYQRPAAPVSGSFPSDGVYATQPGADGAHSANGQAAADIGWRNFFADP 72 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS 116 L L++IAL+ N + + I AA+ RA LFP+ + + R + T Sbjct: 73 RLQALIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNTQRLPAGVSTTG 132 Query: 117 TG--------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + L + W++DLFG+ + + + +LA S A++++IS++ Y+ Sbjct: 133 SPLITRTYNVGLSASWELDLFGRIQSLKDQALAQYLSTAQARKAAEISLISQVADQYLTL 192 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + + + + + L + + L+ L+F G S+L L + + ++ ++ + Sbjct: 193 QSTDDLLKVTEETLKTAQDSYNLTKLQFDNGTGSELDLRQAQTVVEQALANQQAEARDRA 252 Query: 228 MNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 V+ + L+G P + L + QS L I G+P+DL+ RPDI E+ Sbjct: 253 QAVNALVLLIGEPLPDDLPAGLPLDSQS------LLTDIPAGLPSDLLTRRPDIMEAEQT 306 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +P +SL G+ + T F WSF P + LPIF+ G Sbjct: 307 LLAANANIGAARAAFFPKISLTAAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGSNI 366 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A + + +++ + A +EV + L + + + L+ E ++ LS Sbjct: 367 ANLDLAHVQKRIEIANYEKAIQTAFREVSDGLAARGTYDQQIAALERNEEAQQRRYDLSD 426 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L +L + + L A+ + VDLY A+G G+ Sbjct: 427 LRYRNGVDSYLTVLTAQTDLYTAQTSLISARLARWTNLVDLYRALGGGW 475 >gi|62178963|ref|YP_215380.1| outer membrane efflux protein-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126596|gb|AAX64299.1| outer membrane efflux protein-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713419|gb|EFZ04990.1| outer membrane efflux protein-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 485 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGTPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|224582188|ref|YP_002635986.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466715|gb|ACN44545.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322614631|gb|EFY11560.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620150|gb|EFY17022.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623444|gb|EFY20283.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629258|gb|EFY26037.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631978|gb|EFY28732.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637284|gb|EFY33986.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642169|gb|EFY38778.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646266|gb|EFY42780.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652466|gb|EFY48820.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653371|gb|EFY49704.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660480|gb|EFY56716.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664632|gb|EFY60825.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669315|gb|EFY65465.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670861|gb|EFY66994.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678901|gb|EFY74956.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681929|gb|EFY77954.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322688055|gb|EFY84021.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194410|gb|EFZ79605.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197054|gb|EFZ82196.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203379|gb|EFZ88404.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206876|gb|EFZ91829.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210354|gb|EFZ95246.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214596|gb|EFZ99347.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223153|gb|EGA07496.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224876|gb|EGA09139.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230080|gb|EGA14200.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233818|gb|EGA17907.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238488|gb|EGA22546.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244176|gb|EGA28185.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246336|gb|EGA30319.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251962|gb|EGA35825.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257959|gb|EGA41638.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261584|gb|EGA45162.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265042|gb|EGA48541.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272605|gb|EGA56012.1| outer membrane efflux-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 485 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|311106329|ref|YP_003979182.1| outer membrane protein OprM 3 [Achromobacter xylosoxidans A8] gi|310761018|gb|ADP16467.1| outer membrane protein OprM 3 [Achromobacter xylosoxidans A8] Length = 481 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 106/455 (23%), Positives = 213/455 (46%), Gaps = 25/455 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLKWWESFNDTSLNKLVKIALQQ 71 GC + P Y +P P+ Q+ + + + TL W + D SL L++ AL Sbjct: 23 GCALAPTYERPASPV-AQQWGVEGQADFASGPGSAAATLDWRDFVTDPSLRGLIETALAN 81 Query: 72 NLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-NLKTNSTGQLDSDWK--- 125 N + +A + AA+ R++ PS + A + + P +L N T + S+W+ Sbjct: 82 NRDLRRALLNVEAARAMYRVQRSEQLPSIGAQAGGTRQHNPADLNANGTSGVQSEWRAGV 141 Query: 126 ------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +DLFG+ R + E++L + A++++I+++I +Y+ ++R Sbjct: 142 GVTAFELDLFGRVRSLSEAALQEYLATENGARSARISLIAEVIDAYLTREGARQRGLHTE 201 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L +++++L + +G S L + + +D+ +E+ +R + + ++ L G Sbjct: 202 RTLASREQSLQLIARRRAEGIGSALDYEQAKGLTDQARADLARMERQYRQSTNALTLLAG 261 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ Y+ P L + G P++L+ RPDI E +L A IG A++ Sbjct: 262 V--SDLSPYLAPHDGAV-PMLVQQLAAGTPSELLTYRPDILAAEHRLRARNADIGAARAA 318 Query: 299 LYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL G S + + F G WSF P++ LPIFD G+ ++N+ A + Sbjct: 319 FFPRISLTGMFGSASSDLSDLFSGGQRAWSFAPQITLPIFDGGRNQANLDLARVRKEAAV 378 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++++ A +EV + L + + ++ L+ + + ++ LS YR G + L L Sbjct: 379 AEYEQSIQTAFREVMDGLAATDTLRRQEDALRAQTDSSQAALRLSEARYRGGVDNYLRYL 438 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D +R+ ++ L + + + L+ A+G G+ Sbjct: 439 DAQRSDFANQIALIEVRTERQIALASLFRALGGGW 473 >gi|296157988|ref|ZP_06840821.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295891756|gb|EFG71541.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 498 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 127/480 (26%), Positives = 229/480 (47%), Gaps = 47/480 (9%) Query: 5 RAIFSLF-IVLLAGCTVGPEYTKPHMPLLPT-------QFSIGNSKNLINIDTLKWWESF 56 RAI +L LLA CTVGP Y +P + PT + ++ S I+ D WW +F Sbjct: 8 RAITTLASTALLAACTVGPNYQRPQAEVPPTWQTDSYWRVAV-PSHAPISPD---WWSAF 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRF 108 D++L L AL QN T++ A+ A+ + + RA P S + +R Sbjct: 64 GDSTLGALESQALAQNQTLVAASAHYEQARATLANSRAQQIPEVDLGAQGSRFRISQNRP 123 Query: 109 IPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 N T +T + ++ + DLFG+ RR +E S+A+ + + A+L + + Sbjct: 124 QTNYGTPTTSTVQNNVQLGPTINYDTDLFGRIRREVEGSVASAQQSADDLANARLVLTTD 183 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L Y R I + +Q + L +K ++ + G+ S L +++ ++ + S Sbjct: 184 LATDYFSLRELDAEIDVLNQSVILQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQA 243 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNR 275 L H I+ L+G PA +F + PN+ +P I +G+P+D+++ R Sbjct: 244 QLLLNQRAQFEHAIAALVGVPAPQF---------SIAPNVVNVQVPSIPLGVPSDVLQRR 294 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNT-HWSFGPKLYL 332 PDI E+ +A + A+IG+AK+ +PSL+L SI T S T W+ G + Sbjct: 295 PDIASAERAMAAANAQIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAAVGQ 354 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G+ +N++ A + +++TVL A ++V++ +T ++ + + AV Sbjct: 355 VLFDGGRRAANVQFASEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSREAVMD 414 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 + ++L+ Y G + LD++ +++ E D+ I +Q+ S V L A+G G++ Sbjct: 415 AQHLLALANDRYSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTLS-VSLVKALGGGWD 473 >gi|330503256|ref|YP_004380125.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] gi|328917542|gb|AEB58373.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] Length = 493 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 119/483 (24%), Positives = 232/483 (48%), Gaps = 47/483 (9%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDT 59 R + SL + +LAGC GP+Y +P + P QF + K+ D L+ WW + D Sbjct: 8 RTLVSLLLAGVLAGCAQGPDYQRPELAA-PVQFKQVEGWKSAAPADVLERGNWWALYGDA 66 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISH----------R 107 L+ LV+ N + A + A+ + S RA +P S A ++ R Sbjct: 67 ELDALVERLHVSNQNLAAAEAQYRQARALVRSARASFYPTLSGSAGVTRAGQGGGDSTIR 126 Query: 108 FIPNLKTNSTG----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 + + +G L++ W++D++G+ RR +E+S A +++ A + A+L++ Sbjct: 127 TADGVTVSGSGASRISKSYDLSLNAAWELDIWGKLRRGLEASRAEFEASAADLAAARLSL 186 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 S+L+ +Y+ R E+ + + Y +++ L+ ++ G + + + ++KS + Sbjct: 187 QSELVQNYLQLRILDEQKRLLDATVAAYARSLRLTENQYRAGIVPRSDVSQATTQLKSTQ 246 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + LE H I+ L+G E L ++S P + + +P+ L+ RP Sbjct: 247 AQAIDLEWQRAQLEHAIAVLVGVSPAE-LSIAPRESLPVLPE----VPVALPSQLLERRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSL--SLNGSIALTHDNSFPGY----NTHWSFGPKL 330 D+ E+++ + A+IG+A++ +P L S NG +SF + N WS GP+L Sbjct: 302 DVAAAERRVMAANAQIGVAEAAWFPDLTISANGGY---RGSSFADWIEVPNRFWSLGPQL 358 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 L +FD G + + R+E++ + +++ VL++ +EVE+ L + ++ Q A+ Sbjct: 359 ALSLFDGGARSAELERSEAAYDQTVAQYRQAVLDSFREVEDYLVQLRVLEQESGVQQEAL 418 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATA--KVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++S+ L YR G +++++ ATA +L++ +L S V L A+G Sbjct: 419 DAARESLRLIENQYRAGTVDFNSVVNVQ-ATALNNERSNLTLLGSRLTAS-VQLIAALGG 476 Query: 449 GYN 451 G+ Sbjct: 477 GWQ 479 >gi|114799824|ref|YP_758946.1| RND efflux system outer membrane lipoprotein [Hyphomonas neptunium ATCC 15444] gi|114739998|gb|ABI78123.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomonas neptunium ATCC 15444] Length = 479 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 110/456 (24%), Positives = 214/456 (46%), Gaps = 21/456 (4%) Query: 9 SLFIVLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++ ++++AGC P+ P + F G S + ++ +WW F+D L LV Sbjct: 16 AVVVLMIAGCASVPDRPVAEAAPAVGDAFRAGASSDPVSS---EWWAGFSDPVLASLVNT 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--SSYASIS-----HRFIPNLKTNSTGQL 120 LQ + + A + A+ + P S+ A I+ L ++TG L Sbjct: 73 TLQASPALRGADFSVAEAEAALRLALLGASPTASTRAGITAGRPTGTSADRLNVSATGTL 132 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERISIA 177 + W+ D FG+ + + A D+A A+ DIA + + S+ +YI+ R + R+ + Sbjct: 133 AASWEFDAFGRIAALVEA-ARYDAATARELRRDIA-VTLASETALAYINLRGAEARLEVG 190 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + +EL F G ++L + + E ++ + +P E + ++ L Sbjct: 191 RRNAQTQVEGLELVRTLFDNGRATQLDIEQAETLYRTTLASLPVYEADREAAISRLAALT 250 Query: 238 GYPATEFLHYMQK--QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 PA+ +Q+ S P L P+ G P DL+R RPDIR E ++ ++A +A Sbjct: 251 AAPASSADALLQQLTASPGLIPALEAPMTAGTPEDLLRRRPDIRAAEAQVGAALALGEVA 310 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++DL+P ++LN ++ N+ + + FGP + D + +NI ++ Sbjct: 311 RADLFPRITLNANLLGLVRNTGVAVSDESLGFDFGPAITWAGPDLRGVYANIDATDARTG 370 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +Q TVL+A+ + E ALT + + + L+ A+ ++++ L+ + YR+G S L Sbjct: 371 QIIANYQSTVLDALADAETALTDLASENRRTADLEAALASARRALDLARLRYREGLDSYL 430 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++LD +R+ E L++ + + A+ V Y ++G Sbjct: 431 NVLDAQRSLLDAEDRLAVNRAETARRAVRAYRSLGG 466 >gi|170732948|ref|YP_001764895.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169816190|gb|ACA90773.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 483 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 110/452 (24%), Positives = 211/452 (46%), Gaps = 28/452 (6%) Query: 22 PEYTKPHMPLLPTQFSI--GNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTIL 76 P Y +P P+ P ++ G + D W F D +L ++ AL N + Sbjct: 30 PRYERPAAPV-PGAYAPVDGGTTPATAQDAALLDDWHAYFTDPALQAWIEAALANNRDLR 88 Query: 77 QATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNS------TGQLDSDWKI 126 A R+ A+ RAD PS A++ + ++ P ++ ++ G S +++ Sbjct: 89 IAAGRLEEARALYGVQRADRMPSVDANLGYERARQYDPVVRESAISGLYRAGVGVSAYEL 148 Query: 127 DLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DLFG+ R + +++LA+ +A AQ + ++ VI+++ +Y+ R E++++A + LD Sbjct: 149 DLFGRVRSLSDAALADYFATADAQRTV-RIGVIAEVAGAYVSERSLHEQLALAQRTLDAR 207 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ L+ ++ G + + L E + S + L++ V + L G +F Sbjct: 208 ERMAALTQRRYAAGTSDAIELRSAEMLVASARASQAGLQREHAQAVRALQLLAG----DF 263 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + + P+ G P+ L+ RPDIR E +L + A IG A++ +P ++ Sbjct: 264 ARTVPDDATALDSLSIAPVAPGAPSQLLERRPDIRQAEGRLKAANANIGAARAAFFPRIA 323 Query: 305 LN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L GS++ N F + W+F P++ LPIF G+ ++N+ A + +++ Sbjct: 324 LTTDYGSVSDAFSNLFAAGTSVWTFAPRITLPIFAGGRNRANLDVAHARKDIAVAEYEKA 383 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V A +EV +A + + + + Q + L+ Y G + L++LD +R+T Sbjct: 384 VQTAFREVADAFAARDWVDRQLAAQQDVYAADGARLKLAERRYAGGVATYLELLDAQRST 443 Query: 422 AKVEVDLSIAKRQLA-KSYVDLYIAIGSGYNP 452 + +L I RQL + + LY A+G G+ P Sbjct: 444 YESGQEL-IRLRQLRLANAIALYRALGGGWAP 474 >gi|206560038|ref|YP_002230802.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198036079|emb|CAR51974.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 487 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 210/458 (45%), Gaps = 30/458 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNS--------KNLINIDTLKWWESFNDTSLNKLVKIA 68 GC++ P Y +P P+ T + W F D +L + A Sbjct: 25 GCSLAPRYERPAAPVPATYAPVDAGTASAAEPAAAQDAALLDDWHAYFTDPALQAWIDAA 84 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNS------TG 118 L N + A R++ A+ RAD PS A++ + ++ P ++ ++ G Sbjct: 85 LANNRDLRIAAGRLDEARALYGVQRADRMPSVDANLGYERARQYDPVVRESAISGLYRAG 144 Query: 119 QLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 S +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R E++++ Sbjct: 145 VGVSAYELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLHEQLAL 203 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L+ ++ L+ ++ G + + L E + S + L++ + + L Sbjct: 204 AQRTLEARERMAALTQRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQAIRALQLL 263 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G +F + + P+ G P+ L+ RPDIR E +L + A IG A+ Sbjct: 264 AG----DFARNVPDDATALDTLSIAPVAPGAPSQLLERRPDIRQAEARLKAANANIGAAR 319 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P ++L GS++ N F + W+F P++ LPIF G+ ++N+ A + Sbjct: 320 AAFFPRIALTTDYGSVSDAFSNLFAAGTSVWTFAPRITLPIFAGGRNRANLDVAHARKDI 379 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ V A +EV +A + + + + Q + L+ Y G + L+ Sbjct: 380 AVAEYEKAVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVATYLE 439 Query: 414 ILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGY 450 +LD +R+T + +L I RQL + + LY A+G G+ Sbjct: 440 LLDAQRSTYESGQEL-IRLRQLRLANAIALYRALGGGW 476 >gi|168819056|ref|ZP_02831056.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344098|gb|EDZ30862.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084622|emb|CBY94413.1| Outer membrane protein oprM Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 485 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|70730976|ref|YP_260717.1| ABC-type export system, outer membrane channel protein [Pseudomonas fluorescens Pf-5] gi|68345275|gb|AAY92881.1| ABC-type export system, outer membrane channel protein [Pseudomonas fluorescens Pf-5] Length = 594 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 124/491 (25%), Positives = 223/491 (45%), Gaps = 62/491 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHM---------PLLP-----TQFSIGNSKNLINIDTL--KWW 53 + IV LA C VGP++++P + PL P + G ++ L+N + +WW Sbjct: 55 ICIVALASCAVGPDFSRPELSRDAGYSATPLPPRTVTAGVAAGGAAQRLVNGMDIPGQWW 114 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------- 106 F L+ LV+ ALQ N I A + A E + + +A LFPS AS S Sbjct: 115 TLFRSPQLDALVQEALQANPDIDAAQAALRQANELVYAEQASLFPSLSASASKTREKVSA 174 Query: 107 --------------RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 + T ++ L + D+FG RR IE+S A D Q++ Sbjct: 175 ASALGSSGGAAAAGGSAAQIFTVNSASLSVSYAPDVFGGTRRQIEASGAQADYQRYQLEA 234 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 L + + L+ + I +++I+ ++ L ++L + GA L+ +A Sbjct: 235 TYLTLTANLVNTAISLASIRDQIAATETVIRLQSDQLDLLQAQRRLGAIGDSDLLTQQAT 294 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQ-PNLYIP--INIGI 267 + + +P L+K + + LG +P+ Q + +FQ +L++P + + + Sbjct: 295 LAQTRATLPPLQKQLAQTRNQLQAYLGRFPS-------QDRGEHFQLASLHLPEELPLSL 347 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 P+ ++ RPD+R E +L + A IG+A ++ P S+ GS+ AL F W Sbjct: 348 PSAIVEQRPDVRSAEAQLHQASADIGVAIANQLPQFSITGSLGSTALAGTKLFSSGTGVW 407 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S + P+FD G ++ R A ++ ++ ++ TV+ A ++V NAL ++ D + + Sbjct: 408 SLAGSIAQPLFDAGALEHRKRAAVAAYEQAAARYRGTVITAFQDVANALRALQADAEALQ 467 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS--YVD- 441 + A ++S+ L+ YR G L++L TA+ +I R A++ Y D Sbjct: 468 QQVLAETAARQSLDLAQAQYRLGAVGYLNLL-----TAQQTYQNAIVSRVRAQAARYSDT 522 Query: 442 --LYIAIGSGY 450 L+ A+G G+ Sbjct: 523 TALFQALGGGW 533 >gi|322433848|ref|YP_004216060.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] gi|321161575|gb|ADW67280.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] Length = 481 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 119/481 (24%), Positives = 221/481 (45%), Gaps = 49/481 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP--HMPLL---PTQFSIGN-SKNLINIDTLKWWESFNDT 59 A + I LAGC VGP+Y +P P P +I + +KN ++ +W + F + Sbjct: 15 AAGGVLIGTLAGCNVGPKYKRPAYQAPAAFRGPDDAAIASEAKN--SLGDQQWAQVFREP 72 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTN- 115 L L+ AL N + A + I + + RA FP+ + + F + Sbjct: 73 ELQALITRALTNNYDLRIAAQHIAEQRAQVQITRAQQFPTVSVGGSGVGADFDSSSFGTG 132 Query: 116 -----------STGQLD--SDWKIDLFG-QRRHIESSLANL-DSAYAQVDIAKLNVISKL 160 + G ++ + W D +G R+ ++ A L +AQ + +L+++ + Sbjct: 133 SGSGSGITSPLAIGSINVSAAWTPDFWGLYRKQTAAARAVLLAQTWAQRAV-RLSLVQDV 191 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS-LVKLEAEIKSIESDI 219 + Y+ R ++ I Q + + +++L+ T G +S LS L + E + + S + Sbjct: 192 VTDYLQLRALDHQLEITRQTIKARQDSVDLTK-ALTDGGSSPLSDLRQAEQLLYTATSQV 250 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNR 275 P LE+ ++ + ++ LLG H PN P + GIP+ L+ R Sbjct: 251 PQLEQQIQVEENALTLLLGENPGPVAHT--------DPNALTPPPQDLPTGIPSQLLERR 302 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKL 330 PDI+ E L + A+IG+A++ +P L+++ S A T NSF T + G L Sbjct: 303 PDIQQAEATLIAANAQIGVARAQFFPQLTISAS-AGTGGNSFASLVDSSSKTIYGIG-SL 360 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF GK++ + A+ + QE + +Q+ + +V NAL ++N+ + + + V Sbjct: 361 SQPIFQGGKLRGQLNLAKETQQEDVLAYQKAITTGFHDVSNALIALNKQRAYREQQEKLV 420 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S L+ + Y+ G + L++L + A +++L A++ A + V LY A+G G+ Sbjct: 421 AAAQDSTRLARLRYQGGATAYLEVLTTDTALFTAQLNLVTAQQGEALTLVQLYTALGGGW 480 Query: 451 N 451 Sbjct: 481 Q 481 >gi|299139295|ref|ZP_07032470.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298598564|gb|EFI54727.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 485 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 117/479 (24%), Positives = 220/479 (45%), Gaps = 47/479 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLV 65 ++ + LAGC VGP+Y +P+ P P + + + + ++L +W + F + L L+ Sbjct: 18 AVLLGTLAGCNVGPKYKQPNFPA-PPAYRGADEAAVSSAESLGDQQWSQVFREPELQALI 76 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTG----- 118 K AL N + A + I + + RA FP+ + IP L + + Sbjct: 77 KTALTNNYDLRIAAQHILEQQAQVQITRAQQFPTLGIGGTGIGAGIPALNSIGSNNSGSN 136 Query: 119 ----------------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L + W D +G R+ E++ L S ++ ++ ++ Sbjct: 137 SNSSLSLSSPLAEGDLSLSATWNPDFWGLYRKQTEAARDQLLSQTWAQRAVRMTLVQQVA 196 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK-LEAEIKSIESDIP 220 +YI R ++ I Q L + + +++L+ G + LS V+ E + + S+IP Sbjct: 197 TTYIQLRSLDRQLEITKQTLGVRQDSVKLTE-TLENGGSVPLSDVRQAEQLLYTATSEIP 255 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRP 276 LE+ + + ++ LLG H PN P + G+ L+ RP Sbjct: 256 QLEQQIQQQENALTLLLGANPGPVGHT--------DPNALTPPPQDLPTGLTTQLMARRP 307 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSF-PGYNTHWSFGPKLYL 332 DI+ E +L ++ A IG+A++ +P LSL+ S D N F G T +S G L Sbjct: 308 DIQQAEAQLKEANANIGVARAQFFPQLSLSASAGFGSDSFTNFFNAGSRTIYSIG-SLTQ 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ GK++ + ++++ QE +++Q+TV A +V NAL ++N+ + + + V+ Sbjct: 367 PIFEGGKLRGQLNLSKATEQEMLLSYQKTVTGAFHDVSNALIALNKQHALRVQQEKLVDS 426 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + L+ + Y+ G + L++L + ++ L A++ A + V LY A+G G+ Sbjct: 427 AQDATRLARLRYQGGATAYLEVLTTDSNLFTAQLSLVTAQQGEALALVQLYSALGGGWQ 485 >gi|168240155|ref|ZP_02665087.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448804|ref|YP_002044379.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407108|gb|ACF67327.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340261|gb|EDZ27025.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 485 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|325927354|ref|ZP_08188607.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325928586|ref|ZP_08189771.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325541019|gb|EGD12576.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325542277|gb|EGD13766.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 482 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 216/461 (46%), Gaps = 30/461 (6%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESFNDTSLNKLVKIAL 69 L+GC ++ P Y +P P+ G++ N + N + W + D L ++V +AL Sbjct: 16 LSGCVSMAPHYARPDAPVPGVIGDTGSTGNAGTGMPNAAAVDWRQVVTDARLQQVVALAL 75 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------IPNLKTNSTG 118 N + A I A+ RA LFP+ A++SH P + +++G Sbjct: 76 DNNRDLRVAVLNIEQARAQYRIQRARLFPAVDATVSHAAQRAAAATSFTGAPQIIRSASG 135 Query: 119 QLD-SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERISI 176 ++ S W++DLFG+ R +++ A Q + +L++++++ ++ ++R+++ Sbjct: 136 EVGISSWELDLFGRIRSLKNQALETYLASEQTQRSTRLSLVAEVANDWLTVAADQQRLAL 195 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q LD +K + L+ L+ G S L L +++ ++S +D+ + + ++ + Sbjct: 196 AQQTLDSQRKTLRLTELQHDNGIVSGLDLAQIQTSVESARADVANYITQLAQSRNALNLV 255 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G P L S+ + + + P+ + + ++ RPD+ E L + A IG A Sbjct: 256 VGTPVPAALL---PASDAIETGVALAPLPAQLESRVLLQRPDVLSAEHTLKAANADIGAA 312 Query: 296 KSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++ +P++SL GS AL+ F G +T WSF P + LPIF G +K+ + A Sbjct: 313 RAAFFPTISLTANAGRGSDALS--GLFDGDHT-WSFSPSVSLPIFRAGALKAELDVATLE 369 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ + A EV +AL + ++ + Q V+ ++S SLS YR G S Sbjct: 370 KDITIAQYELAIQTAFSEVADALAERTQLEERMHAQQAMVDAAQRSFSLSDARYRHGVDS 429 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +R + L + A + V LY +G G + Sbjct: 430 YLVTLDAQRTLYSAQQTLISLRLTEASNRVTLYKVLGGGAD 470 >gi|172060596|ref|YP_001808248.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171993113|gb|ACB64032.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 485 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/452 (23%), Positives = 209/452 (46%), Gaps = 28/452 (6%) Query: 22 PEYTKPHMPLLP--------TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 P Y +P P+ TQ G + W F D +L + AL N Sbjct: 29 PRYERPAAPVPASYATVDGDTQQGAGPASTADAALLDDWRAYFTDPALQAWIDAALANNR 88 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQL------DSD 123 + A R++ A+ RADL PS A++ + ++ P ++ ++ L S Sbjct: 89 DLRIAAGRLDEARALYGVQRADLMPSVDANLGYERTRQYDPVVRESAVSGLYRAGVGVSA 148 Query: 124 WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DLFG+ R++ +++LA +A AQ + ++ VI+++ +Y+ R +E++++A + L Sbjct: 149 YELDLFGRVRNLSDAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLREQLALAQRTL 207 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D ++ L+ ++ G + + L E + S + L++ +V + L G Sbjct: 208 DARERIAALTQRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQSVRALQLLAG--- 264 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +F + P+ G P+ L+ RPDIR E +L + A+IG A++ +P Sbjct: 265 -DFARSVPADGTALDTLAIAPVAPGAPSALLERRPDIRQAESRLKAANAQIGAARAAFFP 323 Query: 302 SLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 ++L GS++ + F + W+F P++ LPIF G+ ++N+ A + + Sbjct: 324 RVALTTDYGSVSDAFSSLFAAGTSVWTFAPRITLPIFAGGRNRANLDVANARKHIAVAEY 383 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++TV A +EV +A + + + + Q + L+ Y G + L++LD + Sbjct: 384 EKTVQTAFREVADAFAARDWIDRQLAAQQDVYAADGARLKLAERRYAGGVATYLELLDAQ 443 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R+T + +L K + + LY A+G G+ Sbjct: 444 RSTYESGHELIRLKALRLANAIALYRALGGGW 475 >gi|332532945|ref|ZP_08408817.1| RND efflux system, outer membrane lipoprotein CmeC [Pseudoalteromonas haloplanktis ANT/505] gi|332037611|gb|EGI74063.1| RND efflux system, outer membrane lipoprotein CmeC [Pseudoalteromonas haloplanktis ANT/505] Length = 472 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 228/469 (48%), Gaps = 36/469 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 ++ ++ +++L+GC + PE +P+ ++ G ++ L W + FND L L+ Sbjct: 7 SLSAIALLVLSGCQLAPEQKDLALPV-SDAYASGTGQSAAQ--QLNWQQFFNDEKLQTLI 63 Query: 66 KIALQQNLTILQAT---ERINAAKE------------NILSVR----ADLFPSSYASISH 106 +L+ N + A +R+ + N R ADL + A+IS Sbjct: 64 SQSLEHNKDMQIAVLNVQRVRGLYQIEDSALYPSLDLNASGTRQRLPADLSGTGDAAISS 123 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 ++ + S +++D++G+ R +L NL S ++++IS+L +++ Sbjct: 124 QYSATVGITS-------YELDIWGKVRNQSAQALQNLYSTELSQYSTQVSLISELANAWL 176 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + + +A + L ++++ L+ F GATS ++L +L++ + + + DI T ++ Sbjct: 177 NYATDLQLLELAKETLTSQQESLSLTQKSFDLGATSSITLEQLKSTVATAKVDIATYKRL 236 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + L+G + L K N +P+ G+P+DL+ RPDI+ E + Sbjct: 237 LKRDKSALDLLVGKSVSADL-LPNKDLTNLISMPEVPV--GLPSDLLSQRPDIKAAEHLM 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IGIA++ YPS+SL GS + F + WSF P + LPIF+ G+ ++ Sbjct: 294 LAANANIGIARAAFYPSISLTANAGSASSDLSGLFDSGSGTWSFVPTISLPIFNMGRNQA 353 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A++ + T+Q+ + NA +EV +AL ++ ++ L + + + LS + Sbjct: 354 NLDVAKADQEIAVATYQQKIQNAFREVADALADREGYQEQLSALDMLISSRQITFDLSKM 413 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y +G S L +LD +R + L ++ S ++LY A+G G+N Sbjct: 414 RYEKGADSYLQVLDAQRTWYGAQQQLIAGQQAYLASQINLYKALGGGWN 462 >gi|88704255|ref|ZP_01101969.1| Outer membrane efflux protein [Congregibacter litoralis KT71] gi|88701306|gb|EAQ98411.1| Outer membrane efflux protein [Congregibacter litoralis KT71] Length = 513 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 123/460 (26%), Positives = 228/460 (49%), Gaps = 31/460 (6%) Query: 18 CT-VGPEYTKPHMPLL----PTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQ 71 CT +GP+Y +P + L P + S + + L WW F D +L+ L++ L++ Sbjct: 17 CTTLGPDYQEPELDWLVDWQPDLYGQLASDSDAPAEQLSSWWARFEDPALDTLIETVLRE 76 Query: 72 N-------LTILQATERINAAKENILSVRADLFPSSYASISHR----FIP----NLKTNS 116 N L++L+A R+ A E + ++ +S A I R +P N + Sbjct: 77 NPTLQIAGLSVLEARARLGGA-EALRFPQSQQLGASAAYIRQRRSDGLLPATDDNFGSYD 135 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L + W++D +G+ R IES+ A ++ A ++ +I++ Y R + R++ Sbjct: 136 VG-LSAGWELDFWGRFARSIESADAAFMASVANQRDLQVLLIAQTADIYFAYRTTQLRVA 194 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA+ + K++ E++ F G S+L L + + + + IP LE+S + ++ Sbjct: 195 IANNNAAIQKRSFEITRQLFDSGQESELDLQQARTQYLATLATIPDLERSLVQLRNALNL 254 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG P + S + P L P+++ GIPA L+ RPD+R + A+IG+ Sbjct: 255 LLGRPPAPIDALVG--SYDSLPAL-APVSLRGIPAQLVLRRPDVRTSAWQAGVQSAQIGV 311 Query: 295 AKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A+SDLYP+LSL GS D+ ++ GP + IFD G+I++N+R ++ Q+ Sbjct: 312 AESDLYPALSLLGSFGWNGDSLGVTRDGLTFAAGPAIRWNIFDYGRIRANVRVQDARLQQ 371 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + + TV A +E+++A ++ + + L+ + +++ L+ Y++G Sbjct: 372 SLVAFDATVYRAAQEIDDAAIAVLKTAEAQAVLRESRAAAARALELANRRYKEGYADFQR 431 Query: 414 ILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LD +RA A+ E +L + + + + LY A+G G+ P Sbjct: 432 VLDAQRALFAQAEKEL-VNEGAHISAVIALYKALGGGWQP 470 >gi|107023544|ref|YP_621871.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116690627|ref|YP_836250.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105893733|gb|ABF76898.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116648716|gb|ABK09357.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 507 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 113/473 (23%), Positives = 215/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALFATGCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-----------YA 102 E F D L +L++IAL+ N + + I AA+ RA LFP+ A Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRLPA 125 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L +AYA+ ++++++S++ Sbjct: 126 GVSTTRAPLISRTYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QASEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + +++ ++ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P + LPIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 362 GQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 474 >gi|146340842|ref|YP_001205890.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. ORS278] gi|146193648|emb|CAL77665.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. ORS278] Length = 507 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 208/464 (44%), Gaps = 42/464 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC + + P + L P ++ + + TL WW F L +L++ A NL I Sbjct: 50 AGCLLTQDIPDPALDL-PRRYKSASGADTTAPPTLDWWRGFGSRELTQLMEEAQSVNLDI 108 Query: 76 LQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLK------TNSTGQLDS 122 A R A A L PS +Y+ S L N L + Sbjct: 109 AAAVARFRQADALARQAGAALLPSLSGTGQETYSRTSGSSASGLTNGGRETVNYQASLSA 168 Query: 123 DWKIDLFGQRRHI-----ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 +++D FGQ R E+++AN D D+ +L ++ + +Y ++RI Sbjct: 169 SYQLDFFGQNRDALQAAEETAVANRFDR-----DVTQLTTLATVANAYFQVLAAQDRIRT 223 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + + ++ + G + L + + E+ + + ++ +P L ++ NV+ ++ L Sbjct: 224 AERNIASASRVLDAIRERQKAGTGNDLDVAQQESVLANQKAAVPPLRQTLDQNVNALAVL 283 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 + + E + + + P G+P++L+ RPDIR QE +LA + A +G A+ Sbjct: 284 VSR-SPEGIRISGGSLDQIRTPRVTP---GLPSELLTQRPDIRRQEAQLASATANVGSAR 339 Query: 297 SDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + +PS+ L G S AL + F + +S L PIFD GKI N A++ Sbjct: 340 AQFFPSIQLTGNGGYQSAALV--SLFQPHAAFFSLAGSLTQPIFDGGKILGNFENAKARQ 397 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ---HAVELHKKSMSLSMINYRQGR 408 E T+++TV+ A +V NAL SI K+ +LQ V +++ LS R G Sbjct: 398 DELLQTYRKTVIQAFTDVNNALFSI---KQTTIRLQLQREVVAASRRAFQLSEQQLRAGT 454 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ +L+ + + E L A+ +++V LY A+G G+ P Sbjct: 455 ADIVTVLNTQLTLFQAEDALWQAQLARLQAFVSLYQALGGGWEP 498 >gi|167589276|ref|ZP_02381664.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 477 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 121/452 (26%), Positives = 206/452 (45%), Gaps = 77/452 (17%) Query: 17 GCTVGPEYTKP-----------------------HMPLLPTQFSIGNSKNLINIDTLKWW 53 GCTVGP+Y +P H PL P WW Sbjct: 11 GCTVGPDYRRPDVEAPAAWRLDPADAYWHPAVPAHAPLAPV-----------------WW 53 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFI--- 109 +F D L+ L AL+ N ++ R + AK + SV + +P+ + S RF Sbjct: 54 TAFGDAQLDALEADALRNNQSLKVVAARYDQAKATLASVASAQYPAVNLNASGQRFRISA 113 Query: 110 --PN----LKTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P +K+ ST Q +++DLFG+ RR +ES+ A+ D+A A+L + Sbjct: 114 DRPQTNYAVKSMSTVQNEIQVGASVSYELDLFGRVRRSVESAQASTDAARDDFANARLVL 173 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + L SY R I + + + L +K ++ + GA S L L++ A++ + Sbjct: 174 TADLASSYFALRELDAEIDVIDRSIGLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATR 233 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADL 271 + L + I+TL+G PA F + P + +PIN G+P+DL Sbjct: 234 TQAQLLRQQRAQVETAIATLVGTPAPAF---------SLPPRV-VPINAPALPTGVPSDL 283 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFG 327 ++ RPD+ E+ +A + A+IG+A++ +P L+L+ I F G T WS G Sbjct: 284 LQRRPDVASAERAMAAANAQIGVARAAYFPRLTLSPDIGWDA-TRFSGLFTVPALLWSVG 342 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L P+F+ G++K+ + A++ +++TVL A +EV+NA+T ++ + + Sbjct: 343 ASLSQPLFEGGRLKAGVDFAQAGYVAAQANYRQTVLTAFQEVQNAVTGLSMLDEAARQAA 402 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 AV+ +K +SL+ Y G +D+L E+ Sbjct: 403 AAVDDARKLVSLAQDRYAGGLTPFIDVLTAEQ 434 >gi|33601360|ref|NP_888920.1| outer membrane efflux protein [Bordetella bronchiseptica RB50] gi|33575796|emb|CAE32874.1| probable outer membrane efflux protein [Bordetella bronchiseptica RB50] Length = 495 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 116/470 (24%), Positives = 210/470 (44%), Gaps = 42/470 (8%) Query: 20 VGPEYTKPHMPLLPTQFSI--GNSKNLINIDTL------KWWESFNDTSLNKLVKIALQQ 71 VGP+Y P P P ++ G L +WW SF D +L++L AL Sbjct: 23 VGPDYQAP-TPAAPADWTSWHGGPPELAGHAGAAGAPAAQWWRSFGDPALDRLQARALAA 81 Query: 72 NLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNS------------ 116 + + A R A+ +V A P ++ A R + N Sbjct: 82 SPDLQSAALRYAQARTQRRTVAAQRGPQVDAAAAVTRQRQSEDAAANRILDAIAPANRQA 141 Query: 117 ------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D+ W++DL+G+ RR +E++ A++ ++ A D A+L+++S++ + Sbjct: 142 VTELLSDPYTLYQAGFDASWELDLWGRVRRAVEAADADVAASAALYDAARLSLVSEVARN 201 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + R + + + Q + ++ + L + G + L + + ++ +++ +P Sbjct: 202 YFELRTAQHQARLLRQDIAALQEQLSLIQARARGGLAADLDVARQRTQLAGLQAQLPRWL 261 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 + + + LLG E + + P +P +G+P++L R RPDIR E Sbjct: 262 EQQAQAGNRLGLLLGARPGELGDELAAPEGDG-PARPLPDYALGLPSELARRRPDIRAAE 320 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 +L + A+IG+A++DLYPS+ L F + + WS GP L LPIFD G+ Sbjct: 321 ARLHQATARIGLAQADLYPSIRLGARFGYESYESGKFGDWGSRTWSIGPSLDLPIFDSGR 380 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +S + E QE + +Q+TVL A EV++AL+ ++ +L+ E ++ + Sbjct: 381 RRSVVTLRELQQQEAAVAYQQTVLRAWHEVDDALSGYRAEQLQYARLREKAESAAQARAW 440 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + Y G L +LD +R + DL+ + +L V LY A+ G Sbjct: 441 AQARYLGGLTDYLAVLDAQREDLQARRDLTASDGRLRTRLVVLYKALAGG 490 >gi|330819605|ref|YP_004348467.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] gi|327371600|gb|AEA62955.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] Length = 510 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 116/469 (24%), Positives = 206/469 (43%), Gaps = 35/469 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDT 59 F ++ GCT+ P Y +P P+ + S G +S N + W F D Sbjct: 14 FALVATGCTMAPHYQRPAAPVSGSFPSDGVYATQPGADGSHSANGQAAADIGWRNFFADP 73 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS-----------YASISHRF 108 L L++IAL+ N + + I AA+ RA LFP+ A +S Sbjct: 74 RLQALIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNTQRLPAGVSTTG 133 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 P + + L + W++DLFG+ + + + +LA S A++++IS++ Y+ Sbjct: 134 SPFISRDYNVGLSASWELDLFGRIQSLKDQALAQYLSTAQARKAAEISLISQVADQYLTL 193 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + + + + L + + L+ L+F G S+L L + + ++ ++ + Sbjct: 194 QSTDDLLKVTEDTLKTAQDSYNLTKLQFDNGTGSELDLRQAQTVVEQALANQQAEARDRA 253 Query: 228 MNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 V+ + L+G P + L + QS L I G+P+DL+ RPDI E+ Sbjct: 254 QAVNALVLLIGEPLPDDLPAGLPLDSQS------LLTDIPAGLPSDLLTRRPDIMEAEQT 307 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +P +SL G+ + T F WSF P + LPIF+ G Sbjct: 308 LLAANANIGAARAAFFPKISLTAAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGSNI 367 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A + + +++ + A +EV + L + + + L E ++ LS Sbjct: 368 ANLDLAHVQKRIEIANYEKAIQTAFREVSDGLAARGTYDQQIAALARNEEAQQRRYDLSD 427 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L +L + + L A+ + VDLY A+G G+ Sbjct: 428 LRYRNGVDSYLTVLTAQTDLYTAQTSLISARLARWTNLVDLYRALGGGW 476 >gi|83745614|ref|ZP_00942672.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] gi|207722942|ref|YP_002253373.1| typeIsecretion outer membrane transmembrane protein [Ralstonia solanacearum MolK2] gi|207739528|ref|YP_002257921.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] gi|83727691|gb|EAP74811.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] gi|206588129|emb|CAQ18706.1| probable typeIsecretion outer membrane transmembrane protein [Ralstonia solanacearum MolK2] gi|206592908|emb|CAQ59814.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] Length = 508 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 220/472 (46%), Gaps = 39/472 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFS-------IGNSKNLINIDTLKWWESFNDTSLNKL 64 L+ C VGP+Y +P + P Q+ +G + I T WWE F D LN L Sbjct: 23 CALMTACAVGPDYKRPSAEV-PQQYKETAGEWKVGTPNDAIARGT--WWEIFGDPQLNAL 79 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------ST 117 + N IL A + A+ + S RA FP+ S S +++T ST Sbjct: 80 EEQVAAANQNILVAEAQYREAQALVQSARAQFFPTLTGSASASRSRSVRTTVNADGSLST 139 Query: 118 GQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G LD+ W++DL+G+ RR +ES+ A+ ++ + A L+ + L Y Sbjct: 140 GSPTIANAQSLTLDASWELDLWGRIRRTVESNRASAQASAGDLASALLSAQATLAQDYFQ 199 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + Sbjct: 200 LRVTDTQKAVLQRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQAQALLLDAEVTR 259 Query: 227 RMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLY-IPINIGIPADLIRNRPDIRYQEKK 284 H I+ L+G +EF L + P L IP+ I P+ ++ RPDI E++ Sbjct: 260 AQLEHAIAVLIGKSPSEFSLAPTGAATAQALPPLPDIPLEI--PSTVLERRPDIAAAERR 317 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGK 339 +A + A IG+AK+ +P+L+L S L+ + + P + WS GP L +FD G Sbjct: 318 MAAANADIGVAKAAYFPTLTLGASAGLSANTLSRLATLP--SRIWSIGPTLAATLFDGGA 375 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L Sbjct: 376 RSAAVDKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQEAARL 435 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G S L+++ + E L + + + V L A+G G++ Sbjct: 436 DLNRYRAGTVSFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKALGGGWH 487 >gi|115358459|ref|YP_775597.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115283747|gb|ABI89263.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 500 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 122/477 (25%), Positives = 216/477 (45%), Gaps = 63/477 (13%) Query: 17 GCTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 GCTVGP+Y +P + P P + + + WW +F D Sbjct: 24 GCTVGPDYRRPAVDTPAAWRLDPADAYWHPAAPARAPLDPA----------WWTAFGDAQ 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNL 112 L+ L AL+ N ++ R + AK + SV + +P+ + S RF N Sbjct: 74 LDALEADALRNNQSLKAVAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNY 133 Query: 113 KTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 T S + ++ +++DLFG+ RR +ES+ A + A A+L + + L S Sbjct: 134 ATKSMSTVQNEIQVGASVSYELDLFGRVRRSVESAQAGSEQARDDFANARLVLSADLASS 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R I + + +DL +K ++ + GA S L L + +++ + + L Sbjct: 194 YFALRELDTEIDVVKRSIDLQQKALDYVSARHELGAVSGLDLFQQRSQLDATRTQAQLLI 253 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDI 278 + I+TL+G PA F P +PIN G+P+DL++ RPD+ Sbjct: 254 QQRAQVETAIATLVGTPAPAFSL----------PPRVVPINAPALPTGMPSDLLQRRPDV 303 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPI 334 E+ +A + A+IG+A++ +P ++L+ I F G T WS G + P+ Sbjct: 304 ASAERAMAAANAQIGVARAAYFPRIALSPDIGWDA-TRFSGLFTVPALLWSLGASVSQPL 362 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ GK+K+ + A++ ++++TVL A +EV+NA+T ++ + + AV+ + Sbjct: 363 FEGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDAR 422 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K +SL+ Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 423 KLVSLAQDRYTGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 479 >gi|198245239|ref|YP_002214302.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939755|gb|ACH77088.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 485 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/467 (23%), Positives = 219/467 (46%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMP---LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F+ LAGCT+ P++ +P P + P ++ + + W + F+D L +L+ I Sbjct: 19 FVTTLAGCTMAPKHERPTSPTAVVYP--YATSTVSGAPDAADIGWRDFFHDPLLQELIAI 76 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD--- 121 AL+ N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 77 ALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRY 136 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R Sbjct: 137 EMAGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRAD 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + + L K + L+ G ++L L E ++S E + + + Sbjct: 193 RELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDR 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + Sbjct: 253 NALELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGA 311 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ Sbjct: 312 NARIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADL 370 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA Q + ++ + A ++V + L V Q AVE + + L+ + + Sbjct: 371 DRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLSDQVQSEQRAVEASQIAYELAGLRF 430 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++G L +LD R + L + + ++LY A+G G+ Sbjct: 431 QEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|119357364|ref|YP_912008.1| RND efflux system outer membrane lipoprotein [Chlorobium phaeobacteroides DSM 266] gi|119354713|gb|ABL65584.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeobacteroides DSM 266] Length = 478 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/474 (22%), Positives = 225/474 (47%), Gaps = 45/474 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI------NIDTLKWWESFNDTSLNK 63 LF L+ C+V EYT P L P + N+ + I +I + + F+D L + Sbjct: 16 LFCFFLSACSVTKEYTAPDTNL-PASYR--NAPDGIAATSDSSIALIPYEHFFSDRMLTE 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------------SYASISH 106 L+ A+ N + A + I+ A++++ + PS S + Sbjct: 73 LIGAAVVNNYDLQVAIKNIDYAEQSLDQAKLGFLPSLNLGLSTGVNRPSDNSLSAPGLQQ 132 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + T +L + W+ID++G+ R + +LA + +++ + Y Sbjct: 133 SLGKSYSKDYTAELSTSWEIDIWGKIRSRKKGALAEYLKTREAAKAVRTRLVADVATGYY 192 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R F ++ IA + L + + L+F G + L++ EA+ +++ IP LEK+ Sbjct: 193 NLRMFDAQLDIARRNAALADTTLRMMRLQFNAGQVTSLAIEYQEAQKQAVLLSIPKLEKN 252 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRY 280 + + +S L G +P T +Q++ + +Y P+ GIPA L++NRPD+R Sbjct: 253 VAVQENALSILCGRFPGT-----VQRE----RSQVYFPVTDNLPTGIPAALLQNRPDVRE 303 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFD 336 E + + A +G+A++ +YPSL + L S + T S FG + PIF Sbjct: 304 AEMAVMSAHANMGVARASMYPSLDITAQGGLNSFQSSNWFTTPGSLFGLVQGAILQPIFQ 363 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +G++++N +++ ++ + +++ VLNA+ EV +AL S+ + ++ + ++S Sbjct: 364 RGELRANYNKSKIKREQAELAFKKVVLNAVGEVSDALVSLEKLRQQDRIADERLGTLQRS 423 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + + G + L+++ + + E++L+ +RQ + +LY ++G G+ Sbjct: 424 VRNAGLLFTSGMATYLEVITAQNNLLQAELELADIRRQHVSAMAELYRSLGGGW 477 >gi|296445715|ref|ZP_06887669.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] gi|296256818|gb|EFH03891.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] Length = 530 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 227/466 (48%), Gaps = 37/466 (7%) Query: 15 LAGCT------VGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNK 63 L+GC + PEY P ++P + G S + + ++WW+ F D++L+ Sbjct: 21 LSGCDALPAVDLAPEYQPPQF-VVPESWR-GTSPFTVATPSDGEVRMEWWKLFRDSTLDD 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIP 110 L A+ N + A ER A++ ++ ++ P S A P Sbjct: 79 LESKAMAANPDLQAAAERFTQARDIVIKTQSRRIPHLGVAFGASDDKQSDAALFRGPLDP 138 Query: 111 NL-KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ S G L S W+ D + R +++A+ A +A+L++ +++ Y R Sbjct: 139 TYDRSYSPGGLAS-WEPDFWSAIRNATRATVAHAQGLAADYFLARLSLQAEIASDYFVLR 197 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +I Q + YKK++E+ + +F S+L + + ++ + S E+ +E + Sbjct: 198 GYDAQSAIYRQSIAYYKKSLEVVNDRFKGKLASELDVARAQSLLYSTEAKAQQIEADREV 257 Query: 229 NVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 H ++ L PA+ F+ + P L +P G+PA+L+ RPD+ E+++A Sbjct: 258 TEHALAILTNTVPASLFI--ARTSLLRLHP-LKLPR--GVPANLLERRPDVAGAEREMAR 312 Query: 288 SVAKIGIAKSDLYPSL--SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + +IGIA++ +P++ L+G N F +++W++G + +P+F+ G ++ ++ Sbjct: 313 ANREIGIARAAFFPNVVFRLDGGFENNSLNLFKLAHSYWTYGSTVSMPLFEGGLRRAQLQ 372 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ ++ +E ++ VLNA +EVEN L+ N K AV +K+ +L+M Y+ Sbjct: 373 QSWAAYRETEDKYRSVVLNAFREVENGLSLTNRLDTASRKQDAAVAATEKTQNLTMELYK 432 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD++ + AT +D +I K +L S V L A+G G++ Sbjct: 433 GGLVTSLDLIYAQVATLTARIDSAIIKTRLLGSTVGLVRALGGGWS 478 >gi|168232307|ref|ZP_02657365.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|238913272|ref|ZP_04657109.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|205333517|gb|EDZ20281.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 485 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/467 (23%), Positives = 219/467 (46%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMP---LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F+ LAGCT+ P++ +P P + P ++ + + W + F+D L +L+ I Sbjct: 19 FVTTLAGCTMAPKHERPTSPTAVVYP--YATSTVSGAPDAADIGWRDFFHDPLLQELIAI 76 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD--- 121 AL+ N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 77 ALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRY 136 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R Sbjct: 137 EMAGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRAD 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + + L K + L+ G ++L L E ++S E + + + Sbjct: 193 RELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDR 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + Sbjct: 253 NALELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGA 311 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ Sbjct: 312 NARIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADL 370 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA Q + ++ + A ++V + L V Q AVE + + L+ + + Sbjct: 371 DRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRF 430 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++G L +LD R + L + + ++LY A+G G+ Sbjct: 431 QEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|121605776|ref|YP_983105.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120594745|gb|ABM38184.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 495 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/455 (23%), Positives = 208/455 (45%), Gaps = 21/455 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSI----------GNSKNLINIDTLKWWESFNDTSLNKLVK 66 GC++ P Y +P P+ ++ G + I ++W F+D L +L+ Sbjct: 23 GCSMIPTYERPAAPVAADWPALSATAALSGTSGTANQGIAAADIEWQSFFSDPRLRQLID 82 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN------LKTNSTGQL 120 +L+ N + A I A+ RAD +P+ A+ + P+ T + G Sbjct: 83 ASLRNNRDLRIAVLNIEQARAQFQIRRADQYPTVNAAATGSRQPSSSGDSITSTYTAGLA 142 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + ++ D FG+ + E++LA + ++++++ + +Y+ +E I+I Q Sbjct: 143 MTSYEFDFFGRVASLKEAALAQYLATEEGRKTTQISLVAAVANTYLSLLADEELIAITRQ 202 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L + + LS L+F G +S+L + + E+ I++ + L + ++ + + LLG Sbjct: 203 TLATREDSFRLSKLRFDNGVSSELDVRQAESLIEAARVSLAQLIRQRALDQNALVLLLGQ 262 Query: 240 PATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 PAT L + + + G+P+DL+ RPD+R E+ L S A IG A++ Sbjct: 263 PATGELAVALPAGKGLADMPMMVDVPAGLPSDLLTRRPDVRQAEQLLLASNANIGAARAA 322 Query: 299 LYPSLSLNGSI--ALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL S A +H + F + W+ P+L LPIFD G+ ++ + A + Sbjct: 323 FFPKISLTASAGSASSHLGDLFKSGSFGWTLAPQLLLPIFDAGRNRAGLDSANAGRDIAV 382 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++++ A +EV +AL + + Q LS + Y+ G S LD+L Sbjct: 383 AQYEKSIQTAFREVADALAGRATLGEQLRAQQAQANAEGVRFKLSDLRYQNGIASQLDLL 442 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D +R+ + + + +S V LY +G G+ Sbjct: 443 DAQRSLFTAQQAVVQTRLAQLQSQVTLYKVLGGGW 477 >gi|113868388|ref|YP_726877.1| outer membrane heavy metal efflux protein [Ralstonia eutropha H16] gi|113527164|emb|CAJ93509.1| outer membrane heavy metal efflux protein [Ralstonia eutropha H16] Length = 514 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 116/468 (24%), Positives = 214/468 (45%), Gaps = 22/468 (4%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDT 59 LRA+ + L GC +GP++ H P S ++ D +WW+ F D Sbjct: 8 LRALLAC-ACCLGGCARLGPDFQPQHAPWTQQWHSPALEQATEQRAQPDIREWWQVFADP 66 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNS-- 116 +L +LV A N ++ A R+ A+ + ++ FP AS + + Sbjct: 67 TLERLVAEADAHNASLRIAGLRVMEARAQLGIAQSGRFPQLQQASADALYTDRRQAGGLN 126 Query: 117 ---------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + D W++D +G+ R IES+ A +A A D + + +++ +Y Sbjct: 127 PQNSRFWQYSAGFDIGWELDFWGRFSRAIESADAVYFAARANRDDVLVLLRAQVAETYFA 186 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R+ IA L K+++E++ F G T +L L + + + S IP E Sbjct: 187 LRTAEARLRIARDNAALQKRSLEITERLFKSGETDELDLQQAKTQYLGTLSSIPEFESQI 246 Query: 227 RMNVHNISTLLGYPATEFLHYMQK-QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ L+G P + P + + +PA L+ RPDIR E ++ Sbjct: 247 MRTRNALAVLMGRPPGPLPELPELVGKEGVIPLIDRAVLQDVPASLLLRRPDIRAAELQI 306 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSN 343 A A IG+A++DLYPSL+L GSI + ++ G + GP L +FD G+IK+ Sbjct: 307 AAQSALIGVAEADLYPSLTLLGSIVWSA-STLAGTPNSLALIGGPSLRWSVFDYGRIKNT 365 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R ++ Q+ + +Q+ V A +E ++A +++ + L+ + ++S++L+ Sbjct: 366 VRVQDARLQQLIVAYQDAVRQAAREADDAASALIKALDREQILRDSALAARRSLTLANAL 425 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G +LD +RA A + + + + + LY A+G ++ Sbjct: 426 YREGYSDFQRVLDAQRALATQQDAYLVNRSNAVSNLIALYKALGGSWH 473 >gi|302343239|ref|YP_003807768.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301639852|gb|ADK85174.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 505 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 124/484 (25%), Positives = 220/484 (45%), Gaps = 48/484 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP----LLPTQF---------SIGNSKNLINIDTLK- 51 A+ + ++ L GC VGP++ +P P PT ++G+ +N+I + L Sbjct: 11 ALIGMCLLTLTGCAVGPDFQRPAPPDVIGYTPTPLATSLNSSPTTLGDPQNIIKAERLTK 70 Query: 52 -WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASIS--- 105 WW + L+ L+ AL++N T++ A + A+E + + RA L+P ++ Sbjct: 71 HWWRAMGADKLDMLISEALERNPTLMAAEATLRQAQE-LYAARAGSTLYPQLEGNLGGQR 129 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDI 151 RF P + GQ + L+ G RR +E+ A D Q++ Sbjct: 130 QRFNPG----TLGQTGEAREFSLYNAGVGVRYTFDLAGGNRRALEALAARSDYQQFQLEG 185 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L +++ ++ + I K + I IL + +EL+ + G + L+ + Sbjct: 186 ARLTLVANIVTTAITQASLKRQTEIIENILKSQENQLELTRERIRLGHGEPDDALALQTQ 245 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ + +P L + N H ++ L+G P L + +F L + + IP++ Sbjct: 246 LEQTRAKLPPLRYQLQQNEHFLAVLVGKAPGESLLPSFTLE--DF--TLPPELPLLIPSE 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI E L S A+ G+A S LYP L+L+ GS ALT F G + WS Sbjct: 302 LVRARPDILGAEALLHASNAEYGVAISKLYPQLNLSADLGSQALTTGALFGGGSAVWSLV 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL A++ V + L ++ D K + L Sbjct: 362 GQLTQPLFNPG-LPAEKRAALAAFDAAAANYQSVVLEALRNVADVLRALENDSKRLEALS 420 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A KS+ + Y+ G S D+L ++ + E+DL+ + + + Y A+G Sbjct: 421 AADSASGKSLESTQRRYKLGTVSYYDLLIAQQQRLQTELDLTEGQAKRLVNTAAFYQAMG 480 Query: 448 SGYN 451 G N Sbjct: 481 GGLN 484 >gi|107026103|ref|YP_623614.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116692713|ref|YP_838246.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105895477|gb|ABF78641.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116650713|gb|ABK11353.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 488 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 124/473 (26%), Positives = 219/473 (46%), Gaps = 51/473 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 + L+ C+ P Y P L P F +K +I WW++F D L++L Sbjct: 14 VAFLSACSFAPAYHAPQTAL-PASFKEAGGWQAAKPADHIARDGWWKAFRDPVLDRLEAR 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI-----PNLKT 114 N + A R + A R+ LFP SS + R + PN+ Sbjct: 73 VAAANPDVAAAVARHDEAAALFDQARSGLFPTIGLGAQISSNRQSATRPLRGSNQPNVYG 132 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKE 172 ++T D+ +DL+G+ R+ E + D+ + D+A +L++ + L +Y R + Sbjct: 133 DNTLDAGFDYDLDLWGKVRN-EVAAGRADAQASADDLASVRLSLQASLASAYFSLRGLDQ 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + +D Y++ + L+ + G S L + + ++ S + + + H+ Sbjct: 192 QQQLLADTIDTYQRALRLTMSRHAGGIASDLDVSRARTQLDSARASAEDVRARRALYEHS 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADS 288 I+TL G PA+ F P+L Y+P I GIPA L++ RPD+ E+++A + Sbjct: 252 IATLTGVPASSFA---------LTPDLNAAYLPTIPAGIPATLLQRRPDVAAAERRMAAA 302 Query: 289 VAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 AKIG+ ++ +P ++L S L H P N WS GP L L +FD G+ ++ Sbjct: 303 NAKIGVVRAAFFPDVTLGLVGGYQSSGLGHWLRAP--NEIWSIGPSLALTLFDGGRRQAL 360 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +A + E ++ VL+A ++VE+ L + + Q A++ ++++ LSM Sbjct: 361 TDQARAQLAENGAKYRAVVLDACQQVEDNLALTHHLGDEADREQEALDAAERTLQLSMSR 420 Query: 404 YRQGRYSLLDIL-----DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S LD++ ++ A +E+D +RQLA V L A+G G++ Sbjct: 421 YRDGVVSYLDVVTAQTTELNTKIAMLELD---TRRQLAA--VGLIAALGGGWS 468 >gi|315500360|ref|YP_004089163.1| rnd efflux system, outer membrane lipoprotein, nodt family [Asticcacaulis excentricus CB 48] gi|315418372|gb|ADU15012.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] Length = 456 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 118/457 (25%), Positives = 220/457 (48%), Gaps = 38/457 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 ++L+ CT+ P+Y + +P+ QF + + +TL W + F D L ++ AL N Sbjct: 16 LVLSACTLAPKYERGTLPV-ADQFPTPATAQGESAETLPWQKVFLDPRLQSVIYEALVNN 74 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----WKIDL 128 + AT + RA LFPS ++S R T +D W++DL Sbjct: 75 RDLRIATLNAERVRAQYSVQRASLFPSVNGTVSGRRGDTGTGTDTESYSADIGASWELDL 134 Query: 129 FGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 FG+ R + S A L++ +A + AKL++IS + +++ +E++ ++ + L L + Sbjct: 135 FGRVRSL--SNAALNTYFASAENQKAAKLSLISSVATAWLTLGADQEQLRLSRETLRLRE 192 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +++ L+ +F GAT L L + + + +D+ LE + + + + L+G Sbjct: 193 ESLSLTQKRFDLGATDALGLRQEQTLTEQARADVAQLEALVQQDKNALRLLVG------- 245 Query: 246 HYMQKQSNNFQPNLYIPIN-------IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ ++ N PN +P N +G+P++++ RPD+ E L + A IG A++ Sbjct: 246 --VEVEAANL-PN-ALPENAVLSDLPVGLPSEVLLKRPDVVAAEFDLKAANANIGAARAA 301 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL G++ +N F G +T WSF P + +PIF G +NI ESS + + Sbjct: 302 FFPRISLTGAVGKASTDLNNLFDGADT-WSFAPSISVPIFAGG---ANIAGLESSKKARD 357 Query: 356 I---TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 I T+++++ A ++V +AL + +T V+ ++ +LS + +G S L Sbjct: 358 IALATYEKSIQTAFRDVADALAVRSTIDTRLTAQTRVVQAASETEALSRARFDRGVDSRL 417 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + D +R + L + A + LY A G G Sbjct: 418 TLTDAQRTLYGAQQGLITTRLTRALNLTRLYAATGGG 454 >gi|107026426|ref|YP_623937.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116692386|ref|YP_837919.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105895800|gb|ABF78964.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116650386|gb|ABK11026.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 503 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 63/476 (13%) Query: 18 CTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 CTVGP+Y +P + P P + + + WW +F D L Sbjct: 24 CTVGPDYRRPPVDTPAAWRLDPADAYWQPAAPARAPLDPA----------WWTAFGDAQL 73 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNLK 113 + L AL+ N + R + AK + SV + +P+ + S RF N Sbjct: 74 DALEADALRNNQNLKAMAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNYA 133 Query: 114 TNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T S + +D +++DLFG+ RR++E++ A+ + + A+L + + L SY Sbjct: 134 TQSMSTVQNDIQVGAAVSYELDLFGRVRRNVEAAQASTEQSRDDFANARLVLSADLASSY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R I + + +DL +K ++ + GA S L L++ A++ + + L + Sbjct: 194 FTLRELDTEIDVVKRSIDLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLIQ 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIR 279 I+TL+G PA F P +PIN G+P+DL++ RPD+ Sbjct: 254 QRAQVETAIATLVGTPAPAFSL----------PPRVVPINAPALPTGMPSDLLQRRPDVA 303 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIF 335 E+ +A + A+IG+A++ +P ++L+ I F G T WS G L P+F Sbjct: 304 SAERAMAAANAQIGVARAAYFPRITLSPDIGWDA-TRFAGLFTVPALLWSVGGSLSQPLF 362 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+K+ + A++ ++++TVL A +EV+NA+T ++ + + AV+ +K Sbjct: 363 EGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDARK 422 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +SL+ Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 423 LVSLAQDRYAGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 478 >gi|107022697|ref|YP_621024.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116689646|ref|YP_835269.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105892886|gb|ABF76051.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116647735|gb|ABK08376.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 486 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 111/453 (24%), Positives = 210/453 (46%), Gaps = 30/453 (6%) Query: 22 PEYTKPHMPLLPTQFSI-GNSKNLINIDTLK-------WWESFNDTSLNKLVKIALQQNL 73 P Y +P P+ T + G + T + W F D +L + AL N Sbjct: 29 PRYERPAAPVPATYTPVDGGTTPAAEPATAQDAALLDDWHAYFTDPALQAWIDAALANNR 88 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNS------TGQLDSD 123 + A R+ A+ RAD PS A++ + ++ P ++ ++ G S Sbjct: 89 DLRIAAGRLEEARALYGVQRADRMPSVDANLGYERARQYDPVVRESAISGLYRAGVGVSA 148 Query: 124 WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DLFG+ R + E++LA+ +A AQ + ++ VI+++ +Y+ R E++++A + L Sbjct: 149 YELDLFGRVRSLSEAALADYFATADAQRTV-RIGVIAEVAGAYVSERSLHEQLALAQRTL 207 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D ++ L+ ++ G + + L E + S + L++ V + L G Sbjct: 208 DARERMAALTQRRYAAGTSDAIELRSAEMLVASARASQAALQREHAQAVRALQLLAG--- 264 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +F + + P+ G P+ L+ RPDIR E +L + A IG A++ +P Sbjct: 265 -DFARNVPDDATALDTLSIAPVAPGAPSQLLERRPDIRQAEGRLKAANANIGAARAAFFP 323 Query: 302 SLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 ++L GS++ N F + W+F P++ LPIF G+ ++N+ A + + Sbjct: 324 RIALTTDYGSVSDAFSNLFAAGTSVWTFAPRITLPIFAGGRNRANLDVAHARKDIAVAEY 383 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ V A +EV +A + + + +T Q + L+ Y G + L++LD + Sbjct: 384 EKAVQTAFREVADAFAARDWIDRQLTAQQDVYAADGARLKLAERRYAGGVATYLELLDAQ 443 Query: 419 RATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGY 450 R+T + +L I RQL + + LY A+G G+ Sbjct: 444 RSTYESGQEL-IRLRQLRLANAIALYRALGGGW 475 >gi|134095761|ref|YP_001100836.1| putative outer membrane transport protein involved in copper (silver) tolerance (cusC) [Herminiimonas arsenicoxydans] gi|133739664|emb|CAL62715.1| Outer membrane protein oprM [Herminiimonas arsenicoxydans] Length = 502 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/421 (24%), Positives = 199/421 (47%), Gaps = 28/421 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISH 106 + W + F D L L+ AL+ N + A R+ A+ RA+ FP+ + A Sbjct: 63 AMGWRDYFTDARLQDLIAQALENNRDLRAAVLRVEEARAAYGIQRAEQFPAIAAQAGSER 122 Query: 107 RFIP-NLKTNSTGQLDSD---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 +P +L + S W+ID +G+ R + +++L N ++ ++ Sbjct: 123 AHVPADLSLTGKPAMSSQYHVSLGLASWEIDFWGRVRSLRDAALENYLASDEARRAVTIS 182 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++++ SY+ ERI++A + ++++ + + G+TS+L+L +++ + Sbjct: 183 LVAQVANSYLALCELDERIALARLTIASREESLRIFTRRVEVGSTSRLNLTQVQTLLSQA 242 Query: 216 ESDIPTLEKSFRMNVHNISTLLGY----PATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ LE++ + + + L+G PAT S + + +P+ G+P+DL Sbjct: 243 QALGAQLEQARALQANALILLVGVTLELPATS--------SRLDERQMLLPLQPGLPSDL 294 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 + RPDI E +L + A+IG A++ +P ++L GS D F + W+F P Sbjct: 295 LIRRPDIVAAEHQLKAAHAQIGAARAAFFPRIALTGSFGTASAELDGLFAAGSRAWTFAP 354 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LP+FD G+ +N+ AE+ +++T+ A ++V +AL + + + Q Sbjct: 355 SISLPLFDAGRRSNNLSLAEARRDLAVANYEKTIQAAFRDVADALAARQWLAQQLLIAQA 414 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A+ + LS + Y G + LD+LD +R E L +R L S V LY A+G Sbjct: 415 ALTTQTERARLSQLRYDNGAAAYLDVLDAQRDLLVAEQQLVQIRRALLSSQVSLYAALGG 474 Query: 449 G 449 G Sbjct: 475 G 475 >gi|187476838|ref|YP_784862.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] gi|115421424|emb|CAJ47929.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] Length = 496 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 43/466 (9%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---------WWESFNDTSLNKLVKIALQ 70 VGP+Y +P P ++ + N T + WW+ F DT+LN + + AL Sbjct: 23 VGPDYHQPAA-ATPARYKEAAPQEAGNWKTAQPSEAALRGEWWKIFGDTALNAMQEEALG 81 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASI--------------SHRFIPNLKTNS 116 N ++ A R+ A+ RAD FP A + S P+ T Sbjct: 82 ANQSLKAAAARLAQARALQRDARADFFPKVDAGVGPNRQRPSPASQDLSDNASPSASTQW 141 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 Q + ++ DLFG+ ++++ A+ + A L + + + +Y R Sbjct: 142 RAQASAAYEADLFGRVANSVDAATADAQQSEALYRSILLALQADVASTYFLVRERDAESQ 201 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + Q + L + ++ L +F G +L L + ++E+ +++ +++ H ++ Sbjct: 202 LYRQTVALREASLTLIQRRFEAGDIGELDLARAKSELAQAQAEALGVDRQRATAEHALAV 261 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG EF Q +P L + + G+P+ L+ RPDI E+ +A + A++G+A Sbjct: 262 LLGKTPAEFSMPPQP----LKP-LLVTVPAGLPSALLERRPDIAAAERAMASANARVGVA 316 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDKGKIKSNIRR 346 KS +P L + G AL +++S WS G L LPIFD G+ ++++ R Sbjct: 317 KSAFFPRLEITG--ALGYESSQLSKLFQWSSRTFLLGPLVGTALSLPIFDGGRRQASLDR 374 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + +E +++TVL+A +EVE+ L ++ AV+ ++ S+S YR+ Sbjct: 375 ALAVYEEDVAQYRQTVLSAFREVEDNLANLRILGNQTQAQSEAVDASARAASISHAQYRE 434 Query: 407 GRYSLLDILDIERATAKVEVDLSIA-KRQLAKSYVDLYIAIGSGYN 451 G S LD+++ +R T + LS+ + A+S VDL A+G G++ Sbjct: 435 GSISYLDVIEADR-TVLTQRRLSVQLTGEQARSTVDLIRALGGGWD 479 >gi|294627538|ref|ZP_06706121.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598169|gb|EFF42323.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 480 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 221/466 (47%), Gaps = 39/466 (8%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + L+GC ++ P+Y +P P+ S GN+ + N L W + D L ++V +AL Sbjct: 15 IALSGCVSMAPQYARPDAPVPSVIGSTGNADTGMPNAAALDWRQVVTDARLQQMVALALD 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------IPNLKTNSTGQ 119 N + A I A+ RA+LFPS A++SH + +++G+ Sbjct: 75 NNRDLRVAVLAIEQARAQYRIQRANLFPSVDATVSHTAQRAAAATSFTGAAQIIRSASGE 134 Query: 120 LD-SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + S W++DLFG+ R + ES LA+ + + +L++++++ ++ ++R Sbjct: 135 VGVSSWELDLFGRIRSLKNEALESYLASEQTQRS----TRLSLVAEVANDWLTVAADQQR 190 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP--TLEKSFRMNVH 231 +++A Q LD +K + L+ L+ G S L L +++ ++S +D+ T + + N Sbjct: 191 LALAQQTLDSQRKTLRLTELQHDNGIVSGLDLAQIQTSVESARADVANYTTQLAQSRNAL 250 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVA 290 N+ + P + S+ + + + P+ + + ++ RPD+ E L + A Sbjct: 251 NLVVGMSVPVA-----LLPASDAIETGVALAPLPAQLESRVLLQRPDVLSAEHTLKAANA 305 Query: 291 KIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG ++ +P++SL GS AL+ + F G +T WSF P + +PIF G +K+ + Sbjct: 306 DIGATRAAFFPTISLTANAGRGSDALS--SLFDGDHT-WSFSPSVSVPIFRAGALKAELD 362 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + A+ EV +AL + ++ + Q V+ ++S SLS YR Sbjct: 363 VAMLQKDITIAQYELAIQTALSEVADALAERTQLEERMHAQQAMVDAAQRSFSLSDARYR 422 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L LD +R + L + A + V LY +G G + Sbjct: 423 NGVDSYLVALDAQRTLYSAQQTLISLRLTEASNRVTLYKVLGGGAD 468 >gi|4835717|gb|AAD30205.1| IbeB [Escherichia coli RS218] Length = 460 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y + MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSMAPDYQRSAMPV-PHQFSL--SQNGLVNAADNYRSAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + A ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQFNGEDSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++ + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVFNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + Sbjct: 184 QIAEETLGNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRRGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+P+ ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|90424056|ref|YP_532426.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] gi|90106070|gb|ABD88107.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 484 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 119/464 (25%), Positives = 216/464 (46%), Gaps = 38/464 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 + GC + + P + + PT + + + + L WW F T L +L++ A NL Sbjct: 24 VGGCILTQDLPDPALEI-PTGYKAARATTVEAVPALDWWRGFRSTELTQLMEEAQTVNLD 82 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---------------TNSTGQ 119 I AT RI A L PS A S + T + Sbjct: 83 IAAATARIIQADAQARITGTALLPSLTAGGSATRSKSSTASSSGTGVGLGGREITTYSSS 142 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLIPSYIDARHFKERISI 176 L + ++ID + + R +++LA + A A D+ L + + +Y ++RI Sbjct: 143 LSASYEIDFWSKNR--DATLAAEEIANANRFDRDVVALTTAAGVANAYFQVLASQDRIRT 200 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + ++ ++ L+ + G S L + + E+ + + + +P L + NV+ ++TL Sbjct: 201 AERNIASAQRILDAIKLRLSVGTGSDLDVAQQESVLANQRAAVPPLRLTLAQNVNALATL 260 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 + P E + + P G+P++L+ RPDIR QE +LA + A +G A+ Sbjct: 261 VARP-PEAVRVGGGSLDRIAAPRVTP---GLPSELLTQRPDIRRQEAQLASATANVGSAR 316 Query: 297 SDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + +PS+ L G S AL + F + ++ L PIFD G+I +N ++ Sbjct: 317 AQFFPSIQLTGQGGYQSAALA--SLFTPHAAFYNVAAGLTQPIFDGGRILANFEYNQARQ 374 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV-ELHKKSMSLSMINYRQGRYS 410 E T+++TV++A +V+NAL SI ++ + + +LQ V E +++ +L+ R G Sbjct: 375 DELLQTYRKTVVSAFADVDNALESIRQNTERL-RLQRVVLESSRRAFNLAEQQLRAGTAD 433 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 ++ +L+ + + E LS A QLA+ + V LY A+G G+ P Sbjct: 434 IVTVLNTQLTLFQAEDALSQA--QLARLLAIVSLYQALGGGWQP 475 >gi|209520842|ref|ZP_03269585.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498726|gb|EDZ98838.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 489 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 113/466 (24%), Positives = 208/466 (44%), Gaps = 42/466 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 LA C P+Y +P +P+ F + + N K W F D L L++ AL Sbjct: 14 LAACNFAPKYQQPSLPIA-DHFDMTETTNPATATLAKQVDWQTFFADPQLKLLIETALAH 72 Query: 72 NLTILQATERINAAKENILSVRADLFP------------SSYASISHRFIPNLKTNSTGQ 119 N + + RI A+ A P + SI F T+ + Q Sbjct: 73 NRDLAASIARIEQARAFYRIQNAARLPHVNVNAGATRTKAPLGSIEPEF---EDTDISVQ 129 Query: 120 LD--------SDWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNVISKLIPSYID 166 + + +++D +G+ R+ + LA++D+ +A +L++I + +Y Sbjct: 130 FNQYNVQAAVTSFELDFWGRVRNSSEAARRRYLASVDAQHA----FRLSLIGNVASNYYA 185 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +E I +A LD + +E++ L+ G TS + + + ++ + L+++ Sbjct: 186 IRSGEEGIELAQHTLDSRRYALEVAKLRLDAGVTSTVDYDQAAILVTQAQTQLAELQRTT 245 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H + L+G P E L + ++ Q + ++ G+P+ L+ +RPDI+ E++L Sbjct: 246 AQQRHLLEVLIGGPLAEPLPHAPPIADAAQ---FRELDAGLPSALLIDRPDIQQAEQELR 302 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG+A++D +P +SL GS + F WSFG + +PIFD G+ ++ Sbjct: 303 AADADIGVARADFFPRISLTGSFGYVSPELGDLFVPAKQAWSFGALVGMPIFDAGQRRAQ 362 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + E +Q TV NA +EV +AL + K+ + + AVE ++ + Sbjct: 363 LAATRARRDELVAGYQRTVQNAFREVSDALVARQRYKEQIAAQEQAVEAQRQLAETAEQR 422 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y G L+++D R E L + ++ V LY+A+G G Sbjct: 423 YENGISIYLEVVDARRNQFAAEQQLIQLRATALQNGVSLYVALGGG 468 >gi|170735612|ref|YP_001776872.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169817800|gb|ACA92382.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 503 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 63/476 (13%) Query: 18 CTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 CTVGP+Y +P + P PT+ + + WW +F D L Sbjct: 24 CTVGPDYRRPPVDTPAAWRLDPADAYWQPAAPTRAPLDPA----------WWTAFGDAQL 73 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNLK 113 + L AL+ N + R + AK + SV + +P+ + S RF N Sbjct: 74 DALEADALRNNQNLKAMAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNYA 133 Query: 114 TNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T S + ++ +++DLFG+ RR++E++ A+ + + A+L + + L SY Sbjct: 134 TQSMSTVQNEIQVGAAVSYELDLFGRVRRNVEAAQASTEQSRDDFANARLVLSADLASSY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R I + + +DL +K ++ + GA S L L++ A++ + + L + Sbjct: 194 FTLRELDTEIDVVKRSIDLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLIQ 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIR 279 I+TL+G PA F P +PIN G+P+DL++ RPD+ Sbjct: 254 QRAQVETAIATLVGTPAPAFSL----------PPRVVPINAPALPTGMPSDLLQRRPDVA 303 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 E+ +A + A+IG+A++ +P ++L+ I F G T WS G L P+F Sbjct: 304 SAERAMAAANAQIGVARAAYFPRITLSPDIGWDA-TRFAGLFTVPALLWSVGGSLSQPLF 362 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+K+ + A++ ++++TVL A +EV+NA+T ++ + + AV+ +K Sbjct: 363 EGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDARK 422 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +SL+ Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 423 LVSLAQDRYAGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 478 >gi|326622048|gb|EGE28393.1| putative outer membrane efflux protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 496 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/467 (23%), Positives = 219/467 (46%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMP---LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F+ LAGCT+ P++ +P P + P ++ + + W + F+D L +L+ I Sbjct: 30 FVTTLAGCTMAPKHERPTSPTAVVYP--YATSTVSGAPDAADIGWRDFFHDPLLQELIAI 87 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD--- 121 AL+ N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 88 ALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRY 147 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R Sbjct: 148 EMAGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRAD 203 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + + L K + L+ G ++L L E ++S E + + + Sbjct: 204 RELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDR 263 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + Sbjct: 264 NALELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ Sbjct: 323 NARIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADL 381 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA Q + ++ + A ++V + L V Q AVE + + L+ + + Sbjct: 382 DRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLSDQVQSEQCAVEASQIAYELAGLRF 441 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++G L +LD R + L + + ++LY A+G G+ Sbjct: 442 QEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 488 >gi|197295594|ref|YP_002154135.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|195945073|emb|CAR57698.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 500 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 110/461 (23%), Positives = 212/461 (45%), Gaps = 31/461 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P Y +P P+ + G S N + W E F D L +L+ Sbjct: 21 GCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAATAIGWREFFVDPRLQRLI 80 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ---- 119 +IAL+ N + + I AA+ RA LFP+ + + + +PN T G+ Sbjct: 81 EIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNRQRLPNSLTAVPGRNITT 140 Query: 120 -----LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + W++DLFG+ + + + +LA L ++YA+ ++++++S++ Y+ + Sbjct: 141 TYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QASEISLVSQVADQYLTLLSTDD 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ ++ ++ ++ Sbjct: 200 LLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQQAQARARAQALNA 259 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L NL + G+P+DL+ RPD+ E+ L + A I Sbjct: 260 LVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQAEQTLLAANANI 316 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 317 GAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLANV 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 377 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVD 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + + L A+ + VDLY A+G G+ Sbjct: 437 SYLSVLTAQTDLYAAQQSLISARLARWTNLVDLYRALGGGW 477 >gi|200390305|ref|ZP_03216916.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602750|gb|EDZ01296.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 485 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 217/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + + LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIIRLYKALGGGWR 477 >gi|291514047|emb|CBK63257.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Alistipes shahii WAL 8301] Length = 469 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 107/452 (23%), Positives = 216/452 (47%), Gaps = 30/452 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C+V + P + + P + G S L D KWWE + DT+L +L+ L +N +L Sbjct: 24 CSVQKKCKAPQLDM-PAEIVAGQSDTLTLSDR-KWWEVYTDTTLCRLIGRTLDRNRNMLS 81 Query: 78 ATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD--------WKIDLF 129 A RI +E +A PS + + N + D++ W+ DL+ Sbjct: 82 AEARIRQLEELYRVSKAARLPSLGGLAAADYETNDYYGEAHKGDAEFDVKATLSWEADLW 141 Query: 130 G-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 G +R+ LA++++A A ++ +++++ +Y + + + + ++ Sbjct: 142 GNLRWAKRKGAAEYLASVEAARAM----QMTLVAEVATAYFELVALDHELGVVRRTVETR 197 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATE 243 ++++ + L+F G TS+ + + + E+ S + IP LE + IS L G YP+ Sbjct: 198 EESVRQAKLRFEGGLTSETAYQQAKVELASASALIPDLELRIAQKENQISVLAGDYPS-- 255 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + N+ +P + +G+P+ L++ RPD+R E+ L ++A G+A +D +P Sbjct: 256 -----RVARSKMDMNVRMPDSLPVGLPSTLLQRRPDVRQAEQNLKAAMASAGMAYADRFP 310 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+++ + L +D N+ +S+ L P+F G ++ R A ++ + + +++ Sbjct: 311 RLTISLTGGLENDALKGLINSPFSYAAGNLTAPLFAFGSKRAKYRAALAAYDQARLAYEQ 370 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 VL +EV +A+T+ ++ + E ++ + L+ + Y G +D+LD +R Sbjct: 371 KVLEVFREVNDAVTAYRNMRRTAELKFNLKEAARQYVVLAKLQYINGVIRYIDVLDAQRK 430 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +V+ S A R + V LY A+G G+ P Sbjct: 431 FFDAQVEESKAVRNEHLALVGLYKALGGGWQP 462 >gi|308189141|ref|YP_003933272.1| RND efflux system, outer membrane protein precursor [Pantoea vagans C9-1] gi|308059651|gb|ADO11823.1| putative RND efflux system, outer membrane protein precursor [Pantoea vagans C9-1] Length = 461 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 113/467 (24%), Positives = 220/467 (47%), Gaps = 27/467 (5%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------KWWESFN 57 ++++ ++LLAGC+VGP+Y +P + + P + +K L +WW ++ Sbjct: 1 MKSLIPFIVLLLAGCSVGPDYQRPAVAM-PVHYK--ETKGWQQATPLDAQSKGEWWAVYH 57 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SY-----ASISHRFIPN 111 D +L L+ N + + A+ RA LFPS Y S SH + Sbjct: 58 DATLGGLLSQVSVSNQNVATYAAQYRQAQALAAESRAALFPSLGYDGSVTRSGSHATNSS 117 Query: 112 LKTNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++T S+ +L + W++DL+G+ RR +E A+ ++ A++ L+ S+L Y Sbjct: 118 VRTTSSSHQAELSASWELDLWGKLRRTLEEDRASAAASAAELANITLSAQSELAQDYFQL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++I+ Q +D Y++ + + ++ G S+ +L + + ++++ + + Sbjct: 178 RIMDQKIARYQQSVDAYQRYLNVITSQYQAGTASRATLAQAQLQLENASASAQDYQWQRA 237 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 H I+ L+G +F + I +P +L++ RPDI Y E+ +A Sbjct: 238 QMEHAIALLIGKAPADFSLAAASLTATLPA-----IPAALPGELLQRRPDIAYAERNMAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A +G+A + YP L+L+ S ++ + F N WS GP+L + D G + + Sbjct: 293 ANAAVGVAVAGYYPDLTLSASGGVSASVLHSLFSLPNRVWSLGPELSGTLLDAGATSAKV 352 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A +S T+++TVL+A++EVE+ L +N + + Q A + + S ++ + Y Sbjct: 353 DQARASWDASVATYRQTVLSAMQEVEDKLVELNTLQGEIAAQQRATDAAQTSARVTRLQY 412 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD+ E ++ + L + S V L A+G G+ Sbjct: 413 EAGMINYLDVATTENSSLSAQQSLLTLQSTQWVSSVALIAALGGGWQ 459 >gi|319942116|ref|ZP_08016434.1| outer membrane efflux protein [Sutterella wadsworthensis 3_1_45B] gi|319804326|gb|EFW01210.1| outer membrane efflux protein [Sutterella wadsworthensis 3_1_45B] Length = 475 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 114/449 (25%), Positives = 217/449 (48%), Gaps = 22/449 (4%) Query: 17 GCT-VGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQ 71 GC + P+Y +P P+ P S NS+ + + L W++F D L K++++AL Sbjct: 18 GCVNLAPDYERPEAPVAQAWPEGESYANSE--LKREELPKWQNFIQDDRLKKVIELALSN 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------DWK 125 N + A + A+ RADLFP+ A+ S+ T+ST S ++ Sbjct: 76 NRDLRIAALNVEKARALYGVQRADLFPTVAAAASNATTHRESTDSTTHAYSADLAMASYE 135 Query: 126 IDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ID FG+ R++ E +L + L S AQ + ++S++ +++ +E++++ + L Sbjct: 136 IDFFGRVRNLTEQALQSYLQSEDAQ-RTTQGTLVSEVTLAWLTLGANREQLALQKETLAS 194 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +++ L + GA S+L + + S + I T ++ + + + L+G ++ Sbjct: 195 QEESFRLVGESYKYGAASRLDYEQARTTVASARAAITTYVRAVAQSQNALELLVG---SK 251 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 +Q L + G+P++++ NRPDI E+ + + A IG A++ +PS+ Sbjct: 252 VPDELQPSGVELAATLPATMPAGLPSEVLLNRPDIISAERGMISANANIGAARAAFFPSI 311 Query: 304 SL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL N A H + G NT WSF P + +PIF G+ +N+R AE + T+++ Sbjct: 312 SLTANAGSASAHLSDLFGANTGLWSFTPSISIPIFTGGRNLANLRSAEVQEKIAVATYEK 371 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ A +EV +AL + ++ + + + + ++ LS Y+ G + ++LD +R Sbjct: 372 SIQTAFQEVADALATEGTVERELKERREFADAASQAFELSSARYKHGAAAYTEVLDAQRT 431 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + A+ A S V LY +G G Sbjct: 432 KVSAQQAVITAELSRASSLVTLYKVLGGG 460 >gi|269967140|ref|ZP_06181207.1| putative outer membrane protein [Vibrio alginolyticus 40B] gi|269828277|gb|EEZ82544.1| putative outer membrane protein [Vibrio alginolyticus 40B] Length = 547 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 126/489 (25%), Positives = 247/489 (50%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL + L A TVGP+Y P LP+ +S+ +WW+ FND++LN Sbjct: 12 AILSL-LGLSACTTVGPDYVHPKQAPLPSDWSVQKAAKDTQQSEQQLQQWWQQFNDSTLN 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTN-ST 117 +LV++A +QNL + A RI A+ ++L + L +P + +++ ++ + N +T Sbjct: 71 QLVELASKQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARTYVNDQGVNNAT 129 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 130 LSFDAAWEMDVWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ +P+LE + + + ++ L Sbjct: 190 SRRNIEIQERVVRITQVQFDSGNVTELDVQQAKNQLYTTKAALPSLEVAMKQSRTVLALL 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADL 271 LG E +Q + Q Y +P ++ + A+L Sbjct: 250 LGLLPEEVDRLLQSDGMHKQIAEYEAQFKSTGRKSALSGTDERSIVPRPPLLDTQVDANL 309 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 310 VMRRPDLQVSEMQARAQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 367 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 368 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 427 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V Sbjct: 428 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQVVA 484 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 485 LYKALGGGW 493 >gi|91778059|ref|YP_553267.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91690719|gb|ABE33917.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 498 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 129/488 (26%), Positives = 228/488 (46%), Gaps = 61/488 (12%) Query: 4 LRAIFSLF-IVLLAGCTVGPEYTKPHMPLLPT-------QFSIGNSKNLINIDTLKWWES 55 RAI +L LLA CTVGP Y +P + PT + ++ S I+ D WW + Sbjct: 7 CRAITTLASTALLAACTVGPNYQRPQAEVPPTWQTDSYWRVAV-PSHAPISPD---WWSA 62 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHR 107 F D +L L AL QN T+ A+ A+ + + RA P S + +R Sbjct: 63 FGDPTLGTLESEALAQNQTLAAASAHYEQARATLANTRAQQIPEVDLGAQGSRFRISQNR 122 Query: 108 FIPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 N T +T + S+ + DLFG+ RR +E S+A+ + + A+L + + Sbjct: 123 PQTNYGTPTTSTVQSNVQLGPTINYDTDLFGRIRREVEGSVASAQQSADDLANARLVLTT 182 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L Y R I + +Q + L +K ++ + G+ S L +++ ++ + S Sbjct: 183 DLATDYFSLRELDAEIDVLNQSVILQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQ 242 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIGIPADLIRN 274 L H I+ L+G PA +F + P ++ +P I +G+P+D+++ Sbjct: 243 AQLLLNQRAQFEHAIAALVGVPAPQF---------SIAPKVVDVQVPSIPLGVPSDVLQR 293 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNT-HWSFGPKLY 331 RPDI E+ +A + A+IG+AK+ +PSL+L SI T S T W+ G + Sbjct: 294 RPDIASAERAMAAANAQIGVAKAAFFPSLTLTPSIGWESTQFASLLSAPTLMWTLGAAVG 353 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-------EDKKIVT 384 +FD G+ +N++ A + +++TVL A ++V++ +T ++ + ++ VT Sbjct: 354 QVLFDGGRRAANVQFASEGYKVTEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSREAVT 413 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLY 443 QH + L S ++ Y LD++ +++ E D+ I +Q+ S V L Sbjct: 414 DAQHLLALANDRYSGGLVAY-------LDVITAQQSLLTSERQDVQIHGQQMTLS-VSLV 465 Query: 444 IAIGSGYN 451 A+G G++ Sbjct: 466 KALGGGWD 473 >gi|167818488|ref|ZP_02450168.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 91] Length = 486 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 121/477 (25%), Positives = 215/477 (45%), Gaps = 47/477 (9%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTS 60 LLA C VGP+Y +P + P L G K D +WW F D Sbjct: 1 ALLAACAVGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPV 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPN 111 L+ L AL N + A R+ A+ + R+ FP S + +F P Sbjct: 61 LDALETQALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQ 120 Query: 112 LK--TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 TN+T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y Sbjct: 121 GSGPTNATLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYF 180 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + + + L ++ ++L +F +G S+L + + + E+ + ++D + + Sbjct: 181 ELRRLDSDQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARR 240 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQ 281 + H ++ LLG +F +F P+ + G+P+ L+ RPDI Sbjct: 241 RAASEHALAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAA 291 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPI 334 E+ + + A+IG+AKS +P L + G+ A T N F + + GP L LPI Sbjct: 292 ERAMMAANARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPI 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + + +A + E+ +++ VL A +EVE+ L + + AV + Sbjct: 352 FDGGRRSAGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASR 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 412 RAAKLSRTQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 468 >gi|330502126|ref|YP_004378995.1| oprM, RS05459 [Pseudomonas mendocina NK-01] gi|328916412|gb|AEB57243.1| oprM, RS05459 [Pseudomonas mendocina NK-01] Length = 484 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 111/464 (23%), Positives = 215/464 (46%), Gaps = 35/464 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 I L+ C++ PE +P P+ P F + + + W F D L +L+++A Sbjct: 9 LIGCLSACSLTPELQRPAPPV-PASFPEAAALQGAAVPASEMGWRTMFADPQLQRLIELA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL-------- 120 L N + A ++AA+ ++ PS SH L +++G+ Sbjct: 68 LAHNRDLRLAALNVDAARSMFNIQQSTRLPSVSLDASHTRERALAQDNSGESRREVSNQV 127 Query: 121 -----DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R + +++LA ++ D A++++I + +Y + E+ Sbjct: 128 AVNVGTSAFELDLFGRVRSLSDAALARYLASEQGRDAAQISLIGAVADAYFARQLADEQR 187 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L +++++ L+ L S L + + E ++ S E+D+ ++++ + + Sbjct: 188 QVAQRTLKDWQQSLTLARLLQDAKQNSGLDVAQAEGQVASAEADLQARQRAYVQASNALQ 247 Query: 235 TLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 L+G PA L + QP L P+ G+ +D++ RPDIR E+ L+ + Sbjct: 248 LLVGAELPADLPAAREL--------DRQP-LVAPLPAGLHSDMLLVRPDIRQAEQTLSAA 298 Query: 289 VAKIGIAKSDLYPSLSLNGSI--ALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P +SL S A T S F W F P++ P+F G++++ +R Sbjct: 299 NADIGAARAAFFPQVSLTASFGYASTSLGSLFDPSRQVWRFAPQISQPLFQAGRLRAELR 358 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ E + ++ + A +EV +AL + + V ++ ++LS + Y+ Sbjct: 359 LAKVRKSEAVVQYERAIQVAFREVADALAGAATLDRQIEAQTRVVASAQRRVALSGLRYQ 418 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++LD +R + L +R A + V LY A+G G Sbjct: 419 AGVDGRLELLDAQRGLYAAQQSLLELRRDAAVNSVALYKALGGG 462 >gi|78045894|ref|YP_362069.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034324|emb|CAJ21969.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 483 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 217/461 (47%), Gaps = 30/461 (6%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESFNDTSLNKLVKIAL 69 L+GC ++ P Y +P P+ G++ N + N + W + D L ++V +AL Sbjct: 17 LSGCVSMAPHYARPDAPVPGVIGDTGSTGNAGTGMPNAAAVDWRQVVTDARLQQVVALAL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------IPNLKTNSTG 118 N + A I A+ RA LFP+ A++SH P + +++G Sbjct: 77 DNNRDLRVAVLNIEQARAPYRIQRARLFPAVDATVSHTAQRAAAATSFTGAPQIIRSASG 136 Query: 119 QLD-SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERISI 176 ++ S W++DLFG+ R +++ A Q + +L++++++ ++ ++R+++ Sbjct: 137 EVGISSWELDLFGRIRSLKNQALETYLASEQTQRSTRLSLVAEVANDWLTVAADQQRLAL 196 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q LD +K + L+ L+ G S L L +++ ++S +D+ + + ++ + Sbjct: 197 AQQTLDSQRKTLRLTELQHDNGIASGLYLAQIQTSVESARADVANYTTQLAQSRNALNLV 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G P L S+ + + + P+ + + ++ RPD+ E L + A IG A Sbjct: 257 VGTPVPAALL---PASDAIETGVALAPLPAQLESRVLLQRPDVLSAEHTLKAANADIGAA 313 Query: 296 KSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++ +P++SL GS AL+ + F G +T WSF P + LPIF G +K+ + A Sbjct: 314 RAAFFPTISLTANAGRGSDALS--SLFDGDHT-WSFSPSVSLPIFRAGALKAELDVATLE 370 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ + A EV +AL + ++ + Q V+ ++S SLS YR G S Sbjct: 371 KDITIAQYELAIQTAFSEVADALAERTQLEERMHAQQAMVDAAQRSFSLSDARYRHGVDS 430 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +R + L + A + V LY +G G + Sbjct: 431 YLVTLDAQRTLYSAQQTLISLRLTEASNRVTLYKVLGGGAD 471 >gi|288935738|ref|YP_003439797.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] gi|288890447|gb|ADC58765.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] Length = 456 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 118/467 (25%), Positives = 228/467 (48%), Gaps = 33/467 (7%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 ++R + I+ L GC + + +P + + P + +G + + + WW +F+D+ Sbjct: 1 MIRPVTLAVILALVGCQSADVQRAQPTLTI-PAAWRADVGPASPVEGV----WWRNFHDS 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLK 113 +LN+ V AL+ N +L A ER+N + + + LFPS AS+S L Sbjct: 56 TLNQYVDRALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLSGTRARAQSAATGLP 115 Query: 114 TNST---GQLDSDWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKLIPSYIDARH 169 +ST G L + + +D++G R S+ A A A L+V S + Y+ Sbjct: 116 IHSTLYKGGLTASYDVDIWGANRSAASAAGASLEAQKAAAAAANLSVASSVAVGYVTLLS 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + Q L + L+ +F G TS+L L++ ++E++S + IP L+ Sbjct: 176 LDEQLRVTQQTLKSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQ 235 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG A + + Q P L +P + P+ L+ RPDI +++L Sbjct: 236 ENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIVQAQRQLVA 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A + +++ L PS++L + +L D + P + WS G + P+ ++ + + Sbjct: 288 ADATLASSQAQLLPSINLTATGSL-QDRTLPDLLDNPLRLWSVGGSILAPLLNRQALNAQ 346 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + + + ++++TV A KEV ++L +I+ + +T+LQ V + ++++ ++ Sbjct: 347 VDVSMAQRNQALYSYEKTVRGAFKEVNDSLDAISRYGEQLTELQGQVAVAEETLRIAQNR 406 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S LD+LD +R ++ + K L + +DLY A+G G+ Sbjct: 407 YRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIDLYRALGGGW 453 >gi|91776146|ref|YP_545902.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91710133|gb|ABE50061.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 486 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 215/477 (45%), Gaps = 60/477 (12%) Query: 18 CTVGPEYTKPHMPLLPTQF------SIGNSKNLINIDT-------LKWWESFNDTSLNKL 64 C+V P Y KP + + P QF + G +WW+ FND +L+ L Sbjct: 19 CSVAPVYEKPQV-VTPVQFKEASLSATGEQSGQWKTAEPAELNHRGQWWQVFNDLTLDNL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 AL N + AT R+ ++ R++ +P IS R P+ + G Sbjct: 78 EDEALAANQNLQAATARLAQSRALFKDERSNRYPQLSGGISPGHQRISPDAQRTGNGSEQ 137 Query: 122 SDWKI--------DLFGQRRHIESSLANLDSAYAQVDIAKLNVI-----SKLIPSYIDAR 168 + W+ DLFG+ SSL N A A+ +A L + + + Y R Sbjct: 138 TLWRAQAQFAYEADLFGR----VSSLVNAAQADAEQSVALLRSVLLSLQADVAQQYFTIR 193 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 I + L ++ ++L+ ++ G S+L L + ++E+ + S+ + + + Sbjct: 194 ELDAERVIYQHTVKLREQTVQLTQHRYDAGDISELELARAKSELAAARSEELGVTRRRAI 253 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLA 286 H ++ LLG TEF S P I IN+ G+P+ L+ R DI E+ +A Sbjct: 254 AEHALAILLGKSPTEF-------SLAALPLQRISINVPAGLPSSLLERRSDIAAAERAMA 306 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDK 337 + A+IG+AK+ +P L++ G AL +++S G WS G L +PIFD Sbjct: 307 AANARIGVAKAAYFPRLNITG--ALGYESSELGSLFEWSNRTFLLGPLIGTMLSMPIFDG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++ + RA + +E +++TVLNA EVE+ L S+ AV +++ Sbjct: 365 GRREAGLERARAVYEEDVAKYRQTVLNAFGEVEDNLASLRILDNQSEVQDTAVASSQRAS 424 Query: 398 SLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR+G S L+++D +R +V V L + A++ V+L A+G + Sbjct: 425 HLAQSRYREGLVSYLEVIDADRTLLQQKRVTVQLDGER---ARATVNLIRALGGSWE 478 >gi|330974600|gb|EGH74666.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 346 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 109/349 (31%), Positives = 178/349 (51%), Gaps = 30/349 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I SL ++ LA C VGP+Y P + + + +D + WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYQAPATAPAKLAAAAQGNYDRSKVDRV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKT 114 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ D+A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +IA L KN + S TQ G ++L +V+ EA + ++E+ +P L+ Sbjct: 185 EAIARDNL----KNQQSSQNVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQ 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I+TLLG + S + P + + IG P ++RNRPDIR E++LA S Sbjct: 241 RNRIATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAAST 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNT--HWSFGPKLYLPIF 335 A+IG+A +DL+P +SL+G + T S G + WS GP + F Sbjct: 298 ARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAF 346 >gi|121605860|ref|YP_983189.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120594829|gb|ABM38268.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 521 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 136/480 (28%), Positives = 227/480 (47%), Gaps = 56/480 (11%) Query: 7 IFSLFI--VLLAGCTVGPEYTKPH--MPLL--PTQFSIGNSKNLINIDTLKWWESFNDTS 60 +F+ I +L+AGC P Y P MP Q G+ + L + WW F+D Sbjct: 21 LFTGLIASLLMAGCMTQPAYRTPEVRMPAAWHAPQPHAGSRQQLAD-----WWARFDDPV 75 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------------- 105 L++L+ A + + ++ QA RI A+ + S +A PS S + Sbjct: 76 LSRLIHTAEEGSPSLAQAAARIAGARATLASSQAGALPSVSGSAALSRARQAQGSGQGQG 135 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L + S G LD+ W+IDLFG+ R+ E++ A L++ A A++++ +++ +Y Sbjct: 136 QPGSSTLTSRSAG-LDASWEIDLFGKLRKGSEAAEARLEARVADWHDARVSLAAEVADNY 194 Query: 165 I---DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD--- 218 + R E A+Q + + S L+ TQ A + + + ++ + + Sbjct: 195 VQFLGCRMLAE----AYQA----EAASQASTLRITQTAITAGLTARADGDLAAASAANAN 246 Query: 219 IPTLEKSFRMNV--HNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGI---PADL 271 + + + V + L G PA + Q P L P I + P +L Sbjct: 247 VTAIAQGIECGVLLKALVALTGESEPALGLVLDTQP------PALRDPEGISVASVPGNL 300 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 +R RPD+ E+ LA + A IG A +D YPSLSL GSI+L+ + + SFGP L Sbjct: 301 LRQRPDLAASERALAAAYADIGQADADRYPSLSLGGSISLSASSLASSATSW-SFGPSLS 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+FD GK K+ + AE+S QE ++Q V +A+KEVE AL ++ + + A + Sbjct: 360 VPVFDGGKRKAAVASAEASYQEALASYQNAVRSAVKEVEQALLRLDGAARRYQDAERAAQ 419 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ N+R G SLLD+ + R+ E LS KR + ++ LY A+G G++ Sbjct: 420 GYRRYFEAVEKNWRAGNVSLLDLEEARRSAITAESTLSTLKRDRLRYWIALYKALGGGWS 479 >gi|300313898|ref|YP_003777990.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300076683|gb|ADJ66082.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 486 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/427 (24%), Positives = 207/427 (48%), Gaps = 28/427 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQNL 73 GC GP+YT+P + + S +++ D WWE F D LN L + AL N Sbjct: 18 GCASGPDYTRPQVDMPAAWTSEAPWRSMQPADATPRGPWWERFGDAQLNALQQQALAGNQ 77 Query: 74 TILQATERINAAKENILSVRADLFP-------SSYASIS-HRFIPNLKTNSTGQLDSD-- 123 T+ AT R+ A+ + A P ++ + IS +R + N + + + +D Sbjct: 78 TLAIATARLAQARAQLNVTGAAQTPQVNLNARAARSRISANRPLTNYNSPNFSTVQNDFA 137 Query: 124 ------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 +++D FG+ +R +E++ A + + A ++ +L + ++L +Y + R + + Sbjct: 138 LGASVSYEVDFFGRVQRSVEAAGAAAEQSAADLENTRLLLTAELATNYFNLRELDVELDV 197 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + L ++ +EL+ + GATS L + + +A + S + I L + H I+TL Sbjct: 198 VRRAIALQRQALELATARHDLGATSGLDMAQQQALLDSTLTQIDLLGRQRAQYEHAIATL 257 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G PA F + + P I +G+P+D++ RPDI E+ +A + A+IG+A Sbjct: 258 TGTPAPAF-----SITPSLTPITPPAIPVGVPSDVLERRPDIAAAERAMAAANAQIGVAS 312 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YPS L S + N +N WS G +FD G++++ + +++ + Sbjct: 313 AAYYPSFMLQPSYGVDSRNWATLFNAPSLLWSLGVSASQSLFDGGRLRAGVDFSQAGYEA 372 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ TVL A++EVE+ +T + ++ + Q A+ ++ + ++ Y G LD Sbjct: 373 TVASYRRTVLTAMQEVEDGITGLAALERAYAQSQLAIASARRVLEIASSRYEGGATPYLD 432 Query: 414 ILDIERA 420 ++ +++ Sbjct: 433 VITAQQS 439 >gi|256823243|ref|YP_003147206.1| NodT family RND efflux system, outer membrane lipoprotein [Kangiella koreensis DSM 16069] gi|256796782|gb|ACV27438.1| RND efflux system, outer membrane lipoprotein, NodT family [Kangiella koreensis DSM 16069] Length = 485 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 238/479 (49%), Gaps = 40/479 (8%) Query: 4 LRAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFS-------IGNSKNLINIDTLKW--- 52 +R F+L ++ +A C V P++ +P P + +Q++ IG++K L TL+W Sbjct: 3 IRFPFALLLLSTVASCAVTPDFKEPEPPSV-SQYTGSDDAVVIGSNKKLATGQTLQWVDA 61 Query: 53 -----WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASIS- 105 W+ F SLN LV+ L QN ++L A+ ++ +A+E + V +P A +S Sbjct: 62 TDQQWWQQFQSDSLNLLVEKVLTQNPSLLAASAQLRSAEELYQARVGTTRYPKVSADVSA 121 Query: 106 --HRFIPNL-KTNSTGQ--------LDSDWKIDL-FGQRRHIESSLANLDSAYAQVDIAK 153 RF P + +T Q +D +++DL G R +E + +D +++ + Sbjct: 122 QRQRFNPGVFGQQATPQEFSIYNAGVDVSYQLDLSGGNSRALEGLASRVDYQRYELEGTQ 181 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L +++ ++ + + + ++ + Q++ ++ +++ + G SK ++ L++E++ Sbjct: 182 LALVATVLNTAFNQAKLRSQLEVTEQLVAKQEQQLDIVKQQLELGQVSKHEVLMLQSEVE 241 Query: 214 SIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++IP + H ++T+ G P +E + Q +L + IP++L+ Sbjct: 242 LTRANIPVFRNQIQKTEHLLATMAGETPDSENIPDFNMQDFGLPESL----PLIIPSELV 297 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPK 329 R RPDI+ E + + A+ G+A +++YPS++LNG I AL+ + F + WS + Sbjct: 298 RQRPDIQAAESLIQAANAEYGVAIANMYPSINLNGQIGSQALSAGSLFSSESAVWSLIGQ 357 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+FD G + + R A + + +Q VL A++EV + L + D + + L + Sbjct: 358 LTQPLFDPG-LPAEKRAALAEFEAATSNYQYVVLEALREVADTLRQLENDAQKLNALSDS 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + +++M ++ + G S +++L ++ + L A+ Q + V LY+A+G+ Sbjct: 417 NQSSEEAMQITARRHELGAASYIELLLAQQQYLSTRMQLIDAQSQQLINSVSLYLAMGA 475 >gi|319792589|ref|YP_004154229.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315595052|gb|ADU36118.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 512 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 123/485 (25%), Positives = 218/485 (44%), Gaps = 54/485 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI--GNSKNLINID----------TLKWWESFNDTSLN 62 + GC VGP++ KP P P +S G S L+ + T W++FND L+ Sbjct: 21 IGGCAVGPDH-KPSEPRTPADWSSWHGGSPTLLGAERSAAPATASITSGDWKAFNDPVLD 79 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------------SHRFIP 110 +L + L N + A R ++ + A P AS + R I Sbjct: 80 RLQAMVLAANPDLQTAALRFAQSRVQRATAAAQRGPQVNASAGVTRQRQSESGAATRMID 139 Query: 111 NLKTNSTGQ-----------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 L ++ + D+ W+IDL+G+ RR +E++ A+ ++ A ++ A Sbjct: 140 ALGSSVANKDQLIRTLSEPYSLYQAGFDASWEIDLWGRVRRAVEAADADAAASAAMLEQA 199 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 KL+V ++L +Y + R + + IA + +++EL + G + L V+ + Sbjct: 200 KLSVQAELARNYFELRGMQRELRIARADIAAATESLELVQARADGGLVTDLDPVRQRTLL 259 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPA----TEFLHYMQKQSNNFQPNLYIP-INIGI 267 + + IP L + ++ I+ L+G P TE + + P +P + +G+ Sbjct: 260 AELRARIPALLQQEADAMNRITLLIGAPPGRLNTELADAATDSAGDAPP---LPDLALGL 316 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNT-HW 324 PADL R RPDI E +L + A++G+A +DLYP ++L S F + W Sbjct: 317 PADLARRRPDIAAAEAQLHAATARVGVAVADLYPRVTLGAGFGYESVGSERFGDWGGRQW 376 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP L LPIFD G+ +S + E QE + +Q+ VL A E++ AL + + +++ Sbjct: 377 HVGPSLSLPIFDNGRRRSTVDLRELQQQEAAVAFQQMVLKAWHEIDTALNAYSAERQRHA 436 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L +++L+ Y G LD RA + + + + +L+ + V +Y Sbjct: 437 ELVERERQSHDALTLAHARYANGLTDFSVELDARRALLQARREQAQSTSRLSVNLVCVYK 496 Query: 445 AIGSG 449 A+ G Sbjct: 497 ALAGG 501 >gi|171321879|ref|ZP_02910775.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171092827|gb|EDT38092.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 507 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 214/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + LLA GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALLATGCTMAPHYKRPDAPVAQAYPADGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + A I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVAVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSQTGAPYISRAYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + +L+ L+F G S+L L + + ++ S+ Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELDLRQAQTVVEQALSNQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P++ +PIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPRISLTGAFGTGSPTLGGLFKAGTAAWSFAPQITMPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 362 GQNIANLNLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRF 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + V LY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLINARLARWTNLVTLYRALGGGW 474 >gi|160896210|ref|YP_001561792.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160361794|gb|ABX33407.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 491 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/418 (25%), Positives = 203/418 (48%), Gaps = 24/418 (5%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHR 107 L W E F D +L +L+ AL+ N + A R A+ R++LFP+ + Sbjct: 58 LPWREYFTDPALRQLIATALEHNRDLRVAALRAEEARAAFQIQRSELFPAIGVGGQAARA 117 Query: 108 FIP---NLKTNS--TGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNV 156 +P NL S +G+ S W++DL+G+ R + +++L ++ A + + Sbjct: 118 RVPGDLNLSGRSVVSGEYRAEVGFSSWELDLWGRVRSLKDAALQTWLASDAGRHAVQTAL 177 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ Y+ R ER++IA + L +++ + + GA+S+L L +++ + + Sbjct: 178 IAQVADGYLGLRELDERVAIARETLATRQESFRIFTRREAVGASSRLQLAQVQTLLTQAQ 237 Query: 217 SDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRN 274 + + LE + +H ++ L+G +P + F L + + G+P++L+ Sbjct: 238 ALLAQLELARAQQLHALAQLVGAHPGP------LPAAAPFDDALVLAELRPGLPSELLTA 291 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDI E +L + A+IG A++ +P ++L G+ + D F G + W+F P + Sbjct: 292 RPDIAAAEHQLRAARAQIGAARAAFFPRIALTARWGTASAELDGLFDGGSRAWAFVPTVS 351 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G+ ++N+ E + +++ + A +EV + L + + +T + AV+ Sbjct: 352 LPIFDGGRRRANLELGEIRSDMAVAQYEKAIQTAFREVADGLAARRWLSEQITVQRTAVQ 411 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L+ + Y G + L++LD +R L A+R L S V LY A+G G Sbjct: 412 AQAERARLAQLRYDNGSAAYLEVLDAQRDLLAARQQLVQARRALLSSQVGLYAALGGG 469 >gi|258406498|ref|YP_003199240.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfohalobium retbaense DSM 5692] gi|257798725|gb|ACV69662.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfohalobium retbaense DSM 5692] Length = 481 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/463 (22%), Positives = 221/463 (47%), Gaps = 24/463 (5%) Query: 5 RAIFSLFI--VLLAGCT-VGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R +F + + ++L GC P P+ +P F + + WW++ + Sbjct: 3 RCLFLVGVASIVLTGCMPFHPPARNSTAPVPMPETFDSEAQEQAVPA---PWWKALDSPE 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFIPNLKT 114 LN+LV+ AL+ N +I A R+ A+ + A L+PS S S+R ++ T Sbjct: 60 LNRLVQTALEHNFSIRSAWARLRQARAQLDRAEASLWPSLEGSGTGERTRSYREQTDMTT 119 Query: 115 NSTGQ---LDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHF 170 ++ + + +++DL+G+ R + SA Q V+ A +V+ ++ ++++ Sbjct: 120 SANEMSYGVSASYELDLWGRARSARQAQVLSSSASRQDVEAAAASVVGQITATWLETLSL 179 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E++ + + KK + L +++ GA +L + ++ + E +P L+ Sbjct: 180 REQVLRLRRQIAAEKKVLRLQRIRYENGAIDGPTLTRQRRQVAATEGSLPDLQARLGRAR 239 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++TL+G + L Q++ + P +P G+PA L+ RPDI+ KL + Sbjct: 240 NALATLVGVSGPDALCLEQERFPDLLP---LP-EAGLPARLMAERPDIQAAWLKLRAADW 295 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 ++ +A++D+ PSLSL+ T+D F T W L P+F G+ + + R Sbjct: 296 EVAVAQADMLPSLSLSAGRTYTNDM-FSLDWTSWISRLTGNLTAPLFSGGRRLAEVERTR 354 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + +++ + E VL A ++V +AL + ++ V + + ++ ++++S + + Y G+ Sbjct: 355 AVVEQRVADYGEVVLEAFQDVRDALVNEETQRRAVAQTRRQLQAARQALSQARLRYANGQ 414 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D++ + + A+ E L + QL V +Y A+G+ + Sbjct: 415 SGYVDVVAEQASVAQFERQLVQQRAQLLTERVGVYRALGNAWT 457 >gi|167573793|ref|ZP_02366667.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 504 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 209/422 (49%), Gaps = 30/422 (7%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 +D W + F D L L++ AL N + AT+R+ A+ RAD FP+ A+ ++ Sbjct: 72 LDQFDWRQYFVDPRLQALIETALANNRDLRIATQRVEEARAMYGIRRADQFPTITANAAY 131 Query: 107 -RF-------IPN-----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK 153 RF +PN L + S ++ W+ID +G+ R++++ A LDS A D ++ Sbjct: 132 IRFREPGGLLLPNPILGELYSASLSEVQ--WEIDFWGRVRNLKA--AALDSFLAS-DASR 186 Query: 154 ----LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +++I ++ +Y+ + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 RAVTISLIGQVADAYLSLCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSE 246 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 ++ ++ L+++ + H + L+G A Q ++ ++ + G+P+ Sbjct: 247 ILLQQAQTLGSQLQQARDVQQHALDLLVGASAP-----AQTPASLVDASIAPNLAPGLPS 301 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSF 326 L+ NRPD+ E +L + A IG A++ +P ++L SI N F T W+F Sbjct: 302 ALLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTTAWNF 361 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L +PIFD G+ N++ A++ +E +++T+ +A ++V +AL + + V Sbjct: 362 IPNLSMPIFDAGRNIGNLKLAKARREEAVAQYEKTIQSAFRDVADALAARHWLADQVRIA 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q + + L+ + Y G L++LD +R + L +R L S V LY A+ Sbjct: 422 QDTLATQSERARLAKLRYDSGAARFLEVLDAQRDLLSAQQQLVQTRRALLSSRVALYSAL 481 Query: 447 GS 448 G Sbjct: 482 GG 483 >gi|26987451|ref|NP_742876.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida KT2440] gi|24982113|gb|AAN66340.1|AE016262_8 outer membrane efflux protein [Pseudomonas putida KT2440] Length = 504 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 119/460 (25%), Positives = 213/460 (46%), Gaps = 22/460 (4%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +++LAGCT VGP++ KP P L T ++ D +WW F D++L+ L+ Sbjct: 10 LLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDALIA 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTN--- 115 A N + A RI A+ + V+ +P S Y P+ + + Sbjct: 70 EADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSVFW 129 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S+ D W+ID +G+ R IES+ A ++ A A L + +++ +Y R + R Sbjct: 130 QSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRTAEAR 189 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++IA + +++E++ F G +L + + + + IP E + + Sbjct: 190 LAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNALRNIL 249 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +LLG P PN + + +PA L++ RPDIR E+ +A A +G Sbjct: 250 CSLLGRPPGPLPQLEAGHGQLPLPNRAVLQD--VPASLLQRRPDIRAAEQAVAAQSALVG 307 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +A++DLYP LSL GSI T N P + GP L FD G+ K+ +R ++ Sbjct: 308 VAEADLYPQLSLLGSIGWTFLSANHLPD-TFDLAAGPSLIWNPFDYGRRKNTVRVEDARL 366 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ +Q+ V A +E ++A + + + T + A + ++S++L+ YR+G Sbjct: 367 QQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYREGFADF 426 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ++ + + +++ S V LY A+G G++ Sbjct: 427 QRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466 >gi|167566717|ref|ZP_02359633.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 504 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 209/422 (49%), Gaps = 30/422 (7%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 +D W + F D L L++ AL N + AT+R+ A+ RAD FP+ A+ ++ Sbjct: 72 LDQFDWRQYFVDPRLQALIETALANNRDLQIATQRVEEARAMYGIRRADQFPTITANAAY 131 Query: 107 -RF-------IPN-----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK 153 RF +PN L + S ++ W+ID +G+ R++++ A LDS A D ++ Sbjct: 132 IRFREPGGLLLPNPILGELYSASLSEVQ--WEIDFWGRVRNLKA--AALDSFLAS-DASR 186 Query: 154 ----LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +++I ++ +Y+ + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 RAVTISLIGQVADAYLSLCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSE 246 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 ++ ++ L+++ + H + L+G A Q ++ ++ + G+P+ Sbjct: 247 ILLQQAQTLGSQLQQARDVQQHALDLLVGASAP-----AQTPASLVDASIAPNLAPGLPS 301 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSF 326 L+ NRPD+ E +L + A IG A++ +P ++L SI N F T W+F Sbjct: 302 ALLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTTAWNF 361 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L +PIFD G+ N++ A++ +E +++T+ +A ++V +AL + + V Sbjct: 362 IPNLSMPIFDAGRNIGNLKLAKARREEAVAQYEKTIQSAFRDVADALAARHWLADQVRIA 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q + + L+ + Y G L++LD +R + L +R L S V LY A+ Sbjct: 422 QDTLATQSERARLAKLRYDSGAARFLEVLDAQRDLLSAQQQLVQTRRALLSSRVALYSAL 481 Query: 447 GS 448 G Sbjct: 482 GG 483 >gi|300113844|ref|YP_003760419.1| NodT family RND efflux system outer membrane lipoprotein [Nitrosococcus watsonii C-113] gi|299539781|gb|ADJ28098.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosococcus watsonii C-113] Length = 590 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 118/473 (24%), Positives = 222/473 (46%), Gaps = 34/473 (7%) Query: 6 AIFSLFIVLLAGCTVGP--EYTKPHMP---LLPTQ------FSIGN-SKNLINIDTLKWW 53 SL + L+ C GP + T + P +LP F+ N S+ + D WW Sbjct: 27 GCVSLLTLALSACMGGPAIDLTPDYQPEKFILPDSWRGSGPFAKANPSEGELRPD---WW 83 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP 110 + ++D LN+L K A++ N + A ER A+ ++ VR+ L P + + +++ Sbjct: 84 KLYDDPVLNELEKQAMEANPDLHAAAERFIQARAIMMKVRSRLIPQLGVGFGASNNKQSE 143 Query: 111 NLKTNSTGQLDSD----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 G+ D + W+ D + + R + + A+ +A+L++ ++ Sbjct: 144 ERLFRGLGEPDRETTLEFGGLAGWEPDFWSRIRNRTRMKIYRAEQRAAEYILARLSLQAE 203 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y R + +I Q +D YK + + +F + K+ + + + + S E+ + Sbjct: 204 VATNYYTLRSLDGQTAILSQSVDYYKNLLGVVEDRFNGAISPKIDVTRTQFLLFSTEARL 263 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ ++ H I+ L+ A+ F + F P + + IP+ L+ RPDI Sbjct: 264 LEIQAQRQVIEHAIAVLVNRSASSF---KVAPLDEF-PMAKFELPVEIPSTLLERRPDIA 319 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKG 338 E+K+A + IGIA++ YP +S F + W++G ++ LPIF G Sbjct: 320 AMERKMAQANRTIGIARAAFYPHISFRAGSGFEGGTGLFDMAKSFWTYGLEVTLPIFQGG 379 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ +++A S +E ++ TVLNA +EVEN L+ N V KL +VE ++ + Sbjct: 380 HRRARLQQAWSVYRETVDDYRSTVLNAFREVENGLSRTNLISAQVEKLITSVEAALETQN 439 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++ Y+ G + LD+L + T +++ K +L KS V+L A+G G+N Sbjct: 440 LTVNLYQGGLATSLDLLFAQINTLDARIEVVRGKAELMKSSVELVRALGGGWN 492 >gi|167575053|ref|ZP_02367927.1| probable outer membrane chanel lipoprotein [Burkholderia oklahomensis C6786] Length = 551 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 125/486 (25%), Positives = 213/486 (43%), Gaps = 57/486 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 A+ + L GC VGP Y P L P + ++ +WW F+D +L+ Sbjct: 68 AMSGALLCALTGCMVGPSYRPPDASSLKIPDAWHATLPHGGSVVELARWWRQFDDPALSS 127 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------------SYASISH 106 L+ A + TI A R+ A+ + + A L P + + +SH Sbjct: 128 LIDAAQADSPTIDAAVARMRQARASRATSGAGLLPKLDGVASFNRSNANTQAVTSSDVSH 187 Query: 107 RF-IPNLKTNST-GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 I + + ++T G L + W+IDLFG+ RR +++ A +D++ A A+++V + + + Sbjct: 188 STSIESGELDTTRGGLQASWEIDLFGKTRRRMQAGDARIDASVADWHDARVSVAADVADA 247 Query: 164 Y---------IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK----LEA 210 Y +DA+ ++R IA + ++ + L + A K S+ + LE Sbjct: 248 YFRTRACESLVDAQEDEQRSRIATDAV--TRRRVAAGFLSPSDAALPKASIAEGDDVLER 305 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + E+D + + L G P E + I+ +PA Sbjct: 306 QRAECEAD-----------RNALVALTGLPRGELDARLAAGRATVPEPRDGAIDA-LPAR 353 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGP 328 I RPD+R E+ LA + A+IG A + PSLSL GSI + T WSFGP Sbjct: 354 AIEQRPDVRSSERALAAASAEIGEAIAARLPSLSLGGSIEIDRYRVTGQALTLRPWSFGP 413 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L +P+FD G + + A E ++ V A+ EVENAL I+ + + + Sbjct: 414 SLSVPLFDGGSGAARVEGARGRYDEALANYKRKVRQAVMEVENALARIDAS---LGRQRA 470 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAK-VEVDLSIAKRQL--AKSYVDLYIA 445 A+ + + R+ R D+L++E A + V S+A +L A++++ LY A Sbjct: 471 ALVAQENYGRYAQTVERRFRAGASDVLEVETARRQYVTSRQSVASARLERAQAWIALYRA 530 Query: 446 IGSGYN 451 +G G+ Sbjct: 531 VGGGWR 536 >gi|153003440|ref|YP_001377765.1| RND efflux system outer membrane lipoprotein [Anaeromyxobacter sp. Fw109-5] gi|152027013|gb|ABS24781.1| RND efflux system, outer membrane lipoprotein, NodT family [Anaeromyxobacter sp. Fw109-5] Length = 483 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 119/466 (25%), Positives = 212/466 (45%), Gaps = 48/466 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQQNLT 74 GCT+ P Y +P P+ + G++ L W + F D L LV +AL+ N Sbjct: 20 GCTLAPRYQRPPAPVAEA-WEAGSTPAAAGPAAADLGWRDVFGDERLRALVALALENNRD 78 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS-------HRFIPNLKTNST-----GQLDS 122 + A + A+ RA+L P+ AS S P + +T G + Sbjct: 79 LRVAALNVELARAQHRIQRAELLPAVGASASVTRQHLGEDLSPTGEAQTTTGYTVGVGVA 138 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DLFG+ R + S A L+ A + A L++++++ Y+ AR +++++A Q Sbjct: 139 AFELDLFGRVRSL--SAAALERYLATEEARRAAHLSLVAEVATQYLSARALDDQVALARQ 196 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L+ + + L+ F G TS+L L EA++++ ++ + R N LL Sbjct: 197 TLETVESALALTRRTFEAGKTSELDLRIAEAQVQTSRFNL-SRALLLRAQAQNALVLL-- 253 Query: 240 PATEFLHYMQKQSNNFQP----NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 + + QP L + G+P++++R RPDI E L + A IG A Sbjct: 254 ----VGEALPAELPPPQPLETQALLAELPPGVPSEVLRRRPDILAAEHALRSANASIGAA 309 Query: 296 KSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL G+ + F T WSF P++ LP+F G +++++ A Sbjct: 310 RAAFFPSISLTAFGGTSSPELSGLFGAGATTWSFTPRVNLPLFTGGALRASLDVAHLRKS 369 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++ + A +EV +AL + + + + E ++ LS + YR+G S L Sbjct: 370 IEVAQYERAIQGAFREVADALVARAALDEQLEAQRARTEAEQRRYDLSELRYRKGVDSYL 429 Query: 413 DILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGYN 451 +LD +R +L A++ L +S VDLY A+G G+ Sbjct: 430 GVLDAQR-------ELFAARQLLIQSRLARLVNLVDLYRALGGGWR 468 >gi|91223168|ref|ZP_01258434.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|91191981|gb|EAS78244.1| putative outer membrane protein [Vibrio alginolyticus 12G01] Length = 546 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 126/489 (25%), Positives = 247/489 (50%), Gaps = 51/489 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLN 62 AI SL + L A TVGP+Y P LP+ +S+ +WW+ FND++LN Sbjct: 11 AILSL-LGLSACTTVGPDYVHPKQAPLPSDWSVQKAAKDTQQSEQQLQQWWQQFNDSTLN 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL-FP---SSYASISHRFIPNLKTN-ST 117 +LV++A +QNL + A RI A+ ++L + L +P + +++ ++ + N +T Sbjct: 70 QLVELASKQNLDLEAAGLRIVQAR-SLLGISTGLQYPQVQTVSGNLARAYVNDQGVNNAT 128 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++D++G+ R IES+ A ++ A + + +++ +YI+ R F+ERI + Sbjct: 129 LSFDAAWEMDVWGKYARGIESAEAGYYASIASYHDIMVTITAEVARNYINYRTFQERILL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + +++ ++ + ++ ++F G ++L + + + ++ + ++ +P+LE + + + ++ L Sbjct: 189 SRRNIEIQERVVRITQVQFDSGNVTELDVQQAKNQLYTTKAALPSLEVAMKQSRTVLALL 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADL 271 LG E +Q + Q Y +P ++ + A+L Sbjct: 249 LGLLPEEVDGLLQSDGMHKQIAEYEAQFKSTGRKSALSGTDERSIVPRPPLLDTQVDANL 308 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------ 325 + RPD++ E + A+IG+A++ LYPS SL GSI + D++ P ++ Sbjct: 309 VMRRPDLQVSEMQARAQSAQIGVAETALYPSFSLFGSIGI--DSTVPDGSSFSFSDSLTM 366 Query: 326 -FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKK 381 GP IF G++K+NIR ++ QE + + VL A+ EV NA+ + + + K Sbjct: 367 VVGPTFSWNIFQYGRVKNNIRFEDARFQETLTNYNKKVLQAVNEVTNAIEAYDLYLQQKD 426 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + +LQ +V ++ ++SM Y G+ S +L+ + E + K +A V Sbjct: 427 L--RLQ-SVNSSIRAFNISMTQYENGQISFERLLNSVEKMTRAEDSYATIKGNVANQVVA 483 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 484 LYKALGGGW 492 >gi|15077770|gb|AAK83331.1|AF372703_2 putative outer membrane protein [Pseudomonas syringae pv. syringae] Length = 475 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 224/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF L L+GC++ P+Y +P P+ P + + + + W + F D +L +L+ Sbjct: 9 LFAALSLSGCSLIPDYQRPAAPVAAHYPQSSAYAPALSGPLAADMGWRDLFRDPTLQQLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + P T + G + S Sbjct: 69 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGGPVTSG 128 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S A+ +L++++ + +Y+ R + Sbjct: 129 TYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEARRST-QLSLVASVATAYLTWRADQ 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 188 ELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQAAQDLN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N++ L+G TE S + G+P+DL++ RPDI E +L + A Sbjct: 248 NLTLLVG---TEVAD--SAPSRPLSSEWLAEVPAGLPSDLLQRRPDILEAEYQLQSANAS 302 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F G + W F P++ +PIF+ G +++++ ++ Sbjct: 303 IGAARAAFFPSITLTANAGTSSTELSGLFKGGSGGWVFSPQIDIPIFNAGSLRASLDYSK 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ A +EV + L + K + V+ +++ L+ YR G Sbjct: 363 IQKDISVSKYEKSIQTAFQEVADGLAARQTYKHQLKAQSDLVQANQEYYRLAERRYRIGV 422 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R+ + +L + + V+LY A+G G+ Sbjct: 423 DSSLTFLDAQRSLFSAQQNLITDRLSQLTAEVNLYKALGGGWT 465 >gi|299136499|ref|ZP_07029682.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298601014|gb|EFI57169.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 497 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 219/481 (45%), Gaps = 51/481 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF------SIGNSKNLINIDTLKWWESFNDTS 60 + + +++ GC VGP Y +P + P + I + + ++ +W F D Sbjct: 32 VAGVLTLMVVGCKVGPNYKRP-VDTTPQSYRGILAPDIAPAASTASLSDQQWASIFQDPV 90 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---PNLKTNST 117 L +L+ ALQ NL + A +R+ A+ + A PS A + + + P+L +N+ Sbjct: 91 LKRLITEALQNNLDLHIAAQRVLEAQAQLGITHAQQLPSVSAGLGYTALQAPPSLISNNA 150 Query: 118 G-------------QLDSDWKIDLFGQ-RRHIESSLANL-DSAYAQVDIAKLNVISKLIP 162 W +D +G RR E++ A+L S +AQ + ++ + Sbjct: 151 NGTPGNSFFNGGGFSGSGAWNLDFWGMYRRQTEAARADLLASEWAQ-KATRSTLVEGVAE 209 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y R ++ + + + +++L+ GA S + E + + E+++P L Sbjct: 210 AYFQLRSLDAQLEVTQNAIKARQDSLKLTQSLERHGAGSLADTRQAEELLHTAEANLPDL 269 Query: 223 EKSFRMNVHNISTLLGY---------PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +S LLG+ P E H + + +G+P+ L+ Sbjct: 270 RRQIAAQENTLSILLGHNPEAIDRGLPVAEQPHPQE-------------VPVGVPSQLLE 316 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKL 330 RPDI+ E KL + A+IG+AK+ +P +SL + + + F N +W + Sbjct: 317 RRPDIQQAEAKLVAANARIGVAKAQFFPQISLTSLGGSSSNQLQSLFAVQNGYWYAAGTI 376 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIFD G+I++N +++ QE + +++T+L A+K+V N+L S E ++ V Sbjct: 377 SQPIFDGGRIRNNYHLSQAQEQEMLLEYRKTILTALKDVSNSLVSYKETREHREAQAELV 436 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ L+ + Y G S L++L + ++ L+ A++Q A S V LY A+G G+ Sbjct: 437 KSATDAVRLARLRYSGGNTSYLEVLTTDTDLYSAQLLLAQAQQQEAASLVQLYAALGGGW 496 Query: 451 N 451 Sbjct: 497 Q 497 >gi|197104439|ref|YP_002129816.1| outer membrane efflux protein [Phenylobacterium zucineum HLK1] gi|196477859|gb|ACG77387.1| outer membrane efflux protein [Phenylobacterium zucineum HLK1] Length = 467 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 114/447 (25%), Positives = 216/447 (48%), Gaps = 19/447 (4%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINI--DTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 GP+Y P + +G + WW + D +L++L+ AL N + Sbjct: 21 TGPDYKAPGAMAGTSGAFVGAGAAPVEAAEPPADWWRLYQDPALDRLISEALANNRDVAV 80 Query: 78 ATERINAAKENILSVRADLFPSSYAS-----------ISHRFIPNLKTNSTGQLDSDWKI 126 A + + ++ R PS+ AS + R + T S G LD +++ Sbjct: 81 AAANLAQVRASLSEARVGRLPSTTASGGAARSRQPDPATGRMVEG-DTVSAG-LDVSYEV 138 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D FG+ R IE++ A+ D+A A +D+ +++V ++ +Y DA ++ +A + L L + Sbjct: 139 DFFGRVGRAIEAARADRDAAQAALDVVRVSVAAETARAYADACAAGAQLEVAGRSLALSE 198 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + L+ + G + L + + +A+ +S + +P L+ + +S L G P E Sbjct: 199 ETAALTRRQLDAGRGTGLDVARAQAQAESARAAVPPLQAQRDAALFRLSVLTGRPPAEV- 257 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + P L I +G A L+ RPD+R E++LA + A+IG+A + LYP ++L Sbjct: 258 -SPAAAACTAIPQLEAAIPVGDGASLLARRPDVRQAERRLAAATARIGVATAALYPRVTL 316 Query: 306 NGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 GS+A + + G +S GP + + G ++ I +A+++AQ +++T L Sbjct: 317 GGSLASVGGEGRDLGDQVSFSVGPLISWSFPNIGLARARIAQADAAAQGALAAFEQTTLT 376 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A++E E AL++ + T L+ A + +++ L+ + G S L +LD ER A + Sbjct: 377 ALQETETALSAYGRELDRRTALRRARDESAEAVRLARLRQGAGLDSFLTVLDAERTLAGL 436 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E L+ ++ +A + + L+ A+G G+ Sbjct: 437 EAQLAQSEALVASNQITLFKALGGGWR 463 >gi|194291928|ref|YP_002007835.1| rnd efflux system, outer membrane lipoprotein, nodt family [Cupriavidus taiwanensis LMG 19424] gi|193225832|emb|CAQ71778.1| RND efflux system, outer membrane lipoprotein, NodT family [Cupriavidus taiwanensis LMG 19424] Length = 487 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 119/481 (24%), Positives = 220/481 (45%), Gaps = 41/481 (8%) Query: 1 MNILRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLK--WW 53 M A + L+ CT VGP+Y P + + G + + I + WW Sbjct: 1 MRPRSAWAACLCAYLSACTTVGPDYRVPDRAAVRDAVANGPLQGAQAPHVAIAPVPDDWW 60 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------- 105 ++D L++L+ AL N I A+ + A + V ++ P A S Sbjct: 61 RLYDDERLDRLITKALAANTDIRAASANLRRALALLHEVESENLPQGSAGASVARAQLSG 120 Query: 106 HRFI-----PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 F+ P G L + + ID FG+ R E++LA ++ A +D+ ++ V ++ Sbjct: 121 ESFLQQAQPPVFNLGDLG-LGASYLIDFFGKLARADEAALAGAQASEATLDMVRVAVAAQ 179 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ + A Q L + ++ ++ + G + + A +++ + + Sbjct: 180 TVRAYVQGCAATHALHAAGQQLAVQQRTLDATRRLLAAGRAEPAEVARERARTEALRATL 239 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P L+ + + ++ LLG PAT + + + +P L P+ +G A L+R RPD+ Sbjct: 240 PPLQAARSAARYRLALLLGQAPATLPDADV---ACDAEPALRAPLPVGDGAALLRRRPDV 296 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPI 334 R E++LA + A+IG+A +DLYPS+ + S LT H S P WS GP + Sbjct: 297 RQAERELAAATARIGVATADLYPSIRIGASAGLTGVLSHLGSGP--TARWSLGPLVSWSW 354 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL----QHAV 390 G ++ I E++A + VL A++E E AL++ + +++ L +HA Sbjct: 355 PTNG-VRHRIHGLEAAADAALARFDGVVLRALQETETALSAYSRERERHAALHAASEHAT 413 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++ L ++ GR L LD ER A + L+ + ++A VD+++A+G G+ Sbjct: 414 QVAQQQRRL----WQAGRVPWLAHLDAERDLAAAQAALAASAGEVAGRQVDVFLALGGGW 469 Query: 451 N 451 Sbjct: 470 Q 470 >gi|134292294|ref|YP_001116030.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134135451|gb|ABO56565.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 517 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 121/473 (25%), Positives = 219/473 (46%), Gaps = 51/473 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 38 VGPDYKRPDVATPAAFKEAPTLAAGEQAGTWKTAEPADAEHRGEWWKVFGDPVLDALESQ 97 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP AS + +F P TN+ Sbjct: 98 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGASSASQFQPQGTGPTNA 157 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 158 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 217 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 218 DQDLYRRTVELREEALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 277 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 278 LAILLGKAPADFA---------FKETPIVPVAVKIPAGLPSALLERRPDVAAAERAMAAA 328 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP----KLYLPIFDKGK 339 A+IG+AKS +P L + G A ++ S G WS GP L LP+FD G+ Sbjct: 329 NARIGLAKSAYFPKLDITG--AFGYEASTLGDLFLWSSRTFLLGPFAGTALTLPLFDGGR 386 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +++A + EQ +++ VL A +EVE+ L + + AV ++S +L Sbjct: 387 RAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRSATL 446 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y++G + LD++D ER+ + ++ + A S V+L A+G G+ P Sbjct: 447 SRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWGP 499 >gi|209966990|ref|YP_002299905.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodospirillum centenum SW] gi|209960456|gb|ACJ01093.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodospirillum centenum SW] Length = 467 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 108/467 (23%), Positives = 216/467 (46%), Gaps = 34/467 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 IF+L + L A C++ P+ KP +P+ P+ ++ + + ++D W F D L + Sbjct: 5 IFALSLALSA-CSLTPDPVKPGLPVPDAYPSPVTVADGEPAADLD---WRVMFGDPRLQR 60 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI---PNLKTNSTG 118 L+++AL+ N + A + A + RA P+ + ++ + I P + G Sbjct: 61 LIELALRNNRDLRLAALNVEAVQAQYTIQRAARLPAVNATGGVTRQRIAADPQADPATDG 120 Query: 119 QLD---------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ S ++IDLFG+ R + +++ A ++ ++ ++ + +Y R Sbjct: 121 RIQTQHTLDIGVSAFEIDLFGRVRSLSDAAFARYLASEEGRRAVQIALVGTVADAYFAER 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E++ +A + LD ++++++L+ S L + + E + + E+D+ ++ Sbjct: 181 LAEEQLDLARRTLDDWRQSLDLARRLKAADQNSDLDVAQAEGQAATAEADLEERARTLAR 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + L+G + L + + + G+P+DL+ RPDIR E L + Sbjct: 241 ATNALILLVGAELPDELPPPWPLDGH---AVRTRLPAGLPSDLLTRRPDIRKAEHDLVAA 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P LSL S+ F G WSF P++ P+F G++++ +R Sbjct: 298 NADIGAARAAFFPRLSLTTSLGYASPILGRLFDGEQRGWSFTPQITQPLFMGGQLRAELR 357 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE E ++ + A +EV + L + + V ++ ++LS + YR Sbjct: 358 LAEIRKSEAIAEYERAIQTAFREVADGLAGSATYGRQIEAQNRTVASAERRLALSTLRYR 417 Query: 406 QGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++LD +R A + +DL KR + + LY A+G G Sbjct: 418 AGLEGRLELLDAQRQLYAARQTRLDL---KRDEIGNAISLYKALGGG 461 >gi|330819779|ref|YP_004348641.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] gi|327371774|gb|AEA63129.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] Length = 523 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 114/468 (24%), Positives = 214/468 (45%), Gaps = 40/468 (8%) Query: 17 GCTVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC VGP+Y +P + + + ++G + N D +WW F+D L ++V+ L QNL Sbjct: 32 GCMVGPDYHRPELAMADHYHSGAALGQLASDGNTDLARWWRGFDDPVLTRIVERVLAQNL 91 Query: 74 TILQATERINAAKENILSVRADLFP----------------SSYASISHRFIPNLKTNST 117 + A R+ A+ P S + +++ +F P K N T Sbjct: 92 DLEAAQARVIQARAAAGQAATGWLPQGSLDGSVTEQRQSLVSPFGTVASQF-PGYKRNIT 150 Query: 118 -GQLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 Q+D + W++DL G R E+ D+A A +++V+++ +Y R + Sbjct: 151 VEQIDVGASWELDLAGGLHRQAEALRDEADAAEASRMGTRVSVVAEAADAYFQLRSAQAA 210 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I + + + + + + + QG EA + + +P L + + Sbjct: 211 IVLLREQIGTDQAYVRVMDDRVRQGVALDRQRDDAEATLAQDRALLPGLRTLAERQRNRL 270 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADS 288 L+G P T + P++++ P ++ PADL+R RPD+ E+KLA S Sbjct: 271 DVLMGDAPGTNAAAI-----GDTPPDMWVSPGLPADL-RPADLLRRRPDVIAAERKLASS 324 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIKSNI 344 A IG A S YP +SL+G + N+ + +F P L+ +FD G++ + + Sbjct: 325 TAGIGAALSQYYPDISLSGLLGFDRMNNGSLFTAR-AFEPTALAGLHWRLFDFGRVDAEV 383 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A+ + E + ++++VL A ++VENAL ++ E + + + AV + ++ + +Y Sbjct: 384 TQAKGARAEAFARYRQSVLRASEDVENALVALAEAGENTDQWRAAVGANSRAEQSAQRSY 443 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +QG + D+L R+ + +A A++ V Y A+G G+ P Sbjct: 444 QQGAAAEGDLLLRRRSLLEARRAWVLASGDRARATVAAYRALGGGWAP 491 >gi|172063216|ref|YP_001810867.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171995733|gb|ACB66651.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 504 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 123/479 (25%), Positives = 217/479 (45%), Gaps = 67/479 (13%) Query: 17 GCTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 GCTVGP+Y +P + P P + + + WW +F D Sbjct: 24 GCTVGPDYRRPAVDTPAAWRLDPADAYWHPAAPARAPLDPA----------WWTAFGDAQ 73 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNL 112 L+ L AL+ N ++ R + AK + SV + +P+ + S RF N Sbjct: 74 LDALEADALRNNQSLKAVAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNY 133 Query: 113 KTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 T S + ++ +++DLFG+ RR +ES+ A + A A+L + + L S Sbjct: 134 ATKSMSTVQNEIQVGASVSYELDLFGRVRRSVESAQAGSEQARDDFANARLVLSADLASS 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R I + + +DL +K ++ + GA S L L + +++ + + L Sbjct: 194 YFALRELDTEIDVVKRSIDLQQKALDYVSARHELGAVSGLDLFQQRSQLDATRTQAQLLI 253 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDI 278 + I+TL+G PA F P +PIN G+P+DL++ RPD+ Sbjct: 254 QQRAQIETAIATLVGTPAPAFSL----------PPRVVPINAPALPTGMPSDLLQRRPDV 303 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNT----HWSFGPKLYL 332 E+ +A + A+IG+A++ +P ++L+ I TH F G T WS G + Sbjct: 304 ASAERAMAAANAQIGVARAAYFPRIALSPDIGWDATH---FSGLFTVPALLWSLGASVSQ 360 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F GK+K+ + A++ ++++TVL A +EV+NA+T ++ + + AV+ Sbjct: 361 PLFQGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDD 420 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +SL+ Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 421 ARRLVSLAQDRYTGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 479 >gi|294012684|ref|YP_003546144.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292676014|dbj|BAI97532.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 477 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 113/456 (24%), Positives = 206/456 (45%), Gaps = 34/456 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 VGP+Y +P + + + + + + WW FND L +LV+ A+ N + +A Sbjct: 25 VGPDYRRPEIAVGESWVGQASGEAVDG----AWWRKFNDPLLTELVEAAIAGNKDMAEAG 80 Query: 80 ERINAAKENILSVRADLFPSSYASI--------SHRFIPNLKTNSTGQ--------LDSD 123 R+ A+ N +V P + S + +P K G+ DS Sbjct: 81 ARLREARANRDAVHGRELPQAGVSAIATESRLSENGQLPVGKVPGLGRGLSIYDAGFDSS 140 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+IDL+G RR +ES+ A ++A + V+++++ SYID R + A+ +++ Sbjct: 141 WEIDLWGGTRRAVESAEARAEAAEEARRGTVIQVVAEVVRSYIDLRAAQ--ALRANAVVE 198 Query: 183 LYKKN--IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + L + GA S+ ++ E + +S + IP E ++ L+G P Sbjct: 199 ARGQGDIARLVGERLRVGAASRADFLRAETQARSTAATIPAHESDEAAAAFRLALLVGQP 258 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E LH ++ P + + G+ +DL+R RPD+R E+ LA + A +G+A ++L+ Sbjct: 259 -PEALHERLRRVAPM-PAASLDVAAGLRSDLLRRRPDVRLAERGLAAATADVGVATAELF 316 Query: 301 PSLSLNGSIALTHDNSFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 P SL G I L PG + + FGP L PIF G+I++ IR A++ + Sbjct: 317 PRFSLIGGIGLQARE--PGDLLSDSSLRFQFGPSLRWPIFSGGRIRAQIRAADARVEAAT 374 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ VL A+ + E ++ + + A + +++ L+ Y G L +L Sbjct: 375 ARYERAVLTALADSETSINRYASAGLVGVERAAARDAAAEAVELARRRYAAGEEDLTALL 434 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + A + + +A+ + LY A+G G+ Sbjct: 435 QAQLAYSAADRLHVLAQAARLQQLAALYKALGGGWE 470 >gi|296161620|ref|ZP_06844424.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295888097|gb|EFG67911.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 507 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 220/481 (45%), Gaps = 49/481 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMP---------LLPTQFSIGNSKNLINIDT---LKWWE 54 + ++ + +L C+VGP++ +P P L + + N WW Sbjct: 26 VAAIAVAVLGACSVGPDFVRPTPPAGNDYTREQLSASTVAADNEAQSFTRGAEIPADWWT 85 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIP- 110 F LN +V+ A++ N T+ + + A+++N+ + FP + + + R P Sbjct: 86 LFKSDQLNTIVQQAMENNPTLAASEASLRASQDNLRAGYGVFFPQIGAEFDATRARSAPL 145 Query: 111 --NLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L+T T + +D+FG +RR +E A D A + + + ++ Sbjct: 146 RNGLQTPGSIFNLITASGSVSYLLDVFGGKRRTVEGLRAQADYQRYAEKAAYVTLSANVV 205 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + I + + Q+++L K+ + + + G + +++ + + I ++ I Sbjct: 206 NTTIARAAYAAELVATEQLIELEKQQLAATEAQVRSGTAAYANVLSVRSLIAGNQALIAP 265 Query: 222 LEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDI 278 L++ H ++TL G P+ L + S L +P + I +P+DL+R RPDI Sbjct: 266 LQQKISQTEHLLATLEGLLPSEARLPEIDLSS------LALPTDLPISLPSDLVRQRPDI 319 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPI 334 E L + A IG+A + ++PS++LNG+ SF + WS GP + LP+ Sbjct: 320 LSAEAALHIASANIGVATAAMFPSIALNGTYG-AGGTSFGNLSADSFRFWSIGPSITLPL 378 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G + + A + Q+ +++TVL A +V +AL +++ D + LQ VE + Sbjct: 379 FQGGSLWYGRKAAIDAFQQAQANYRQTVLTAFAQVADALNALDHDAQ---ALQAQVEARR 435 Query: 395 K---SMSLSMINYRQGRYSLLDIL--DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ L +NYR G LD+L D++ A + ++A+R + V L++A+G G Sbjct: 436 DADIALHLLQLNYRAGMVGYLDVLVADVQFHQATIAYFQAVAQRY--QDTVALFVALGGG 493 Query: 450 Y 450 + Sbjct: 494 W 494 >gi|188591154|ref|YP_001795754.1| outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] gi|170938048|emb|CAP63032.1| putative Outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] Length = 494 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 221/486 (45%), Gaps = 49/486 (10%) Query: 7 IFSLFIV-LLAGCTVGPEYTKPH-----------MPLLPTQFSIGNSKNLINIDTL---- 50 + SLF LL GC VGP++ P P+ ++ + TL Sbjct: 4 LTSLFAAALLCGCAVGPDFRVPAPPDDAGYVPGPQPVATVAADGADAPGQAHAQTLAAGA 63 Query: 51 ----KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS------ 99 +WW F +L+ ++ AL + T+ QA R+ A+EN+ + A +P+ Sbjct: 64 DVPAQWWTLFRSPALDATIRSALAASPTLAQARARLLEAQENLAARTGATRWPAIDAKLD 123 Query: 100 ------SYASISHRFIPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVD 150 + S+ IP+ T + + +DLFG QRR +E A +D +++ Sbjct: 124 TSRQQVDFQSLGITAIPSPGPFTLYGATVQVSYALDLFGGQRRELEGLQAVVDYQRYELE 183 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+L + + + + I + ++S ++ ++ + ++ + +G +++ L + A Sbjct: 184 AARLALAANVATAAIREAGLRAQLSDTAAMVAAQQRQLGITEARLREGGVARVELQRRRA 243 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGI 267 E+ + +P L++ H ++ G PA+ L + L++P + + + Sbjct: 244 ELAQTRALVPALQRQLDATRHQLAVYTGQTPASAALPEFHLDA------LHLPDTLPVSL 297 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHW 324 PA L R RPDIR E L + A IG+A ++LYP ++L G+ A + F N W Sbjct: 298 PATLARRRPDIRAAEALLHQASANIGVATANLYPQVTLSASGGTQATAARDLFSSLNV-W 356 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S L P+F G++++ R AE++ ++ +++ VL +++V +AL ++ D + Sbjct: 357 SLAAGLVQPVFRGGELQARKRAAEAAYEQSLAAYRQAVLQGLQDVADALRALEADAAALR 416 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + + ++++ YR G S L +LD ER + + ++L+ A+ L Sbjct: 417 ERADGARQARDTLAVVSEQYRLGGVSQLALLDAERQSRQAALELAQARADRLADSAALLQ 476 Query: 445 AIGSGY 450 A+G G+ Sbjct: 477 ALGGGW 482 >gi|167754017|ref|ZP_02426144.1| hypothetical protein ALIPUT_02304 [Alistipes putredinis DSM 17216] gi|167658642|gb|EDS02772.1| hypothetical protein ALIPUT_02304 [Alistipes putredinis DSM 17216] Length = 462 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 105/464 (22%), Positives = 215/464 (46%), Gaps = 28/464 (6%) Query: 6 AIFSLFIVLLAG---CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 AIF + L G C+ P + + P Q + G + +L I L WW+ + D++L Sbjct: 5 AIFVILAALTVGFSSCSAVRHCQAPEVEM-PGQIASGYTDSL-TIADLSWWQFYGDSTLR 62 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------ 116 +++++ L+ N +L A R+ ++ +A+ P+ S + + + +TN Sbjct: 63 RVIELTLENNKDMLAAAARVEQMRQLYRISKAERLPN----FSAKGLADYETNDYADEES 118 Query: 117 ------TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + +L W++DL+G R + A S+ ++ +++++ +Y Sbjct: 119 SRDPEFSAKLSVSWELDLWGNLRWAKRKGGAEYLSSVEDWRAMRMTLVAEVATAYFQLMA 178 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +SI + L + ++ + L+F G TS+ + + E S + IP LE + Sbjct: 179 LDNELSIVRRTLRTRSEGVQQAQLRFEGGLTSETVYQQAKVEYASTATLIPDLESRIEIM 238 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++I+ L+G P E L + N + + +G+P+ L++ RPD+R E++L + Sbjct: 239 ENSIALLMGKSPDWEVL----RGQMNIEAEFPDSLPVGLPSGLLQRRPDVRASEQQLRSA 294 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRA 347 +A G+A +D +P L+ N +D + + +S+ + P+F G+ ++ R A Sbjct: 295 MASAGMAYADRFPRLTFNLVGGWENDALQGFFRSPFSYVAAAIAAPVFGFGRKQAKYRAA 354 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + +++ VL KE +A+ + +K + +K + L+ + YR G Sbjct: 355 LAAYDVARLGYEKKVLEVFKEANDAVVTYRNVRKTAALKVALRDAARKYVELANLQYRGG 414 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +D+LD +R ++ LS A R + V LY A+G G+ Sbjct: 415 SINYIDVLDAQRRYFDAQIGLSNAVRDEHLALVQLYKALGGGWG 458 >gi|300705442|ref|YP_003747045.1| outer membrane efflux protein [Ralstonia solanacearum CFBP2957] gi|299073106|emb|CBJ44463.1| putative outer membrane efflux protein [Ralstonia solanacearum CFBP2957] Length = 482 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/438 (22%), Positives = 201/438 (45%), Gaps = 38/438 (8%) Query: 15 LAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDT-LKWWESFNDTS 60 L GC VGP++ P P LP + G +++L + WW F ++ Sbjct: 19 LGGCAVGPDFKAPAPPAASGYTAQPLPAATASAPVPGGETQHLAEANVPADWWHLFQSSA 78 Query: 61 LNKLVKIALQQNLTILQATERINAAKE---------------NILSVRADLFPSSYASIS 105 L+ LV AL+ + T+ QAT R+ A+ + +VR + P ++ + Sbjct: 79 LDALVDEALRASPTVAQATARLRQAQAEAEAQFGAVLPSVDGTVSAVRQQVNPEAFGFST 138 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + P T + L + +DLFG RR +E+S A +D+ +++ A+L++ ++ + Sbjct: 139 PK--PGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDTQRYELEAARLSLAGNVVTAV 196 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +I+ ++L + + ++ +F G +++ ++ + E+ +P L + Sbjct: 197 VRVASLDAQIATTQRLLAAQRDQLAITERRFGAGGVARVEVLSQRTLLAQTEATLPPLAQ 256 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 257 QAAQARHRLSVLLGREPGAGLPDLPALDALRLPD---PLPVSLPSTLAQRRPDIRAAEAM 313 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 ++ A +G+A ++L+P ++L+ GS N ++ W+ G L P+F G ++ Sbjct: 314 WHEASANVGVATANLFPRITLSAGLGSETTGFRNLLGAGSSIWNLGGSLTQPLFHGGTLR 373 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R AE++ +++ VL ++EV +AL +++ D + + A + +++ Sbjct: 374 ARKREAEAAYDAAGAAYRQAVLQGLQEVADALHAVHNDARALQARALATDQATQALRAEQ 433 Query: 402 INYRQGRYSLLDILDIER 419 Y G S L +LD +R Sbjct: 434 ARYAAGGISTLALLDAQR 451 >gi|296156421|ref|ZP_06839259.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295893020|gb|EFG72800.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 537 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 119/496 (23%), Positives = 215/496 (43%), Gaps = 60/496 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---------------------GNSKNL 44 A L + LLA C+V P Y +P + P F G K Sbjct: 14 ATSGLLVALLAACSVEPTYKRPEVDT-PVAFKEAPAASAPSAASAPSAGSAQDNGTWKQA 72 Query: 45 INIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-- 99 D +WW F D LN L + A N + A R+ A+ + ++D FP Sbjct: 73 QPADDAHRGEWWTIFGDPQLNALEEQAAAANQDLKAAAARVQQARAVTQAAKSDWFPKLD 132 Query: 100 -------SYASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAY 146 AS + +F P+ + G Q+ + ++ DLFG+ ++ +S A+ + Sbjct: 133 AGFGPTRERASAASQFQPDSAGGTNGTIWRAQVGASYEADLFGRVGSNVNASRADEQQSE 192 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A +L++ + + +Y R + + + L + ++L +F +G +L + Sbjct: 193 ALFRSVQLSLQADVAQNYFQLRELDTDQDLYRRTVALREDTLKLVERRFKEGDIGELDVS 252 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI- 265 + E+ S +D + + + H+++ LLG P +F +F P+ + Sbjct: 253 RARNELASARADAVGVARQRAASEHSLAILLGKPPADF---------SFAEAPLAPVTVR 303 Query: 266 ---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPG 319 G+P+ L+ RPDI E+ + + A++G+AKS +P L + G+ T + F Sbjct: 304 VPPGLPSALLERRPDISAAERAMQAANARVGLAKSAFFPKLDITGAAGFESATLGDLFMW 363 Query: 320 YNTHWSFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + + GP L LP+FD G+ K+N+ +A S E +++ VL A +EVE+ L Sbjct: 364 SSRAFILGPFAGTALTLPLFDGGRRKANLAQARSKYDEDVAQYRQQVLVAFREVEDNLAD 423 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + + + AV+ +++ LS Y +G S LD++D ER ++ S Sbjct: 424 LRLLDDQMREQNDAVQASQRAAHLSRTQYTEGAVSYLDVIDGERQVLISQLQASHLSGTQ 483 Query: 436 AKSYVDLYIAIGSGYN 451 A + V+L A+G G+ Sbjct: 484 AVATVNLIRALGGGWG 499 >gi|167574739|ref|ZP_02367613.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 593 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 220/472 (46%), Gaps = 53/472 (11%) Query: 17 GCTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 GC VGP+Y +P + P P + S+ WW++F D Sbjct: 111 GCAVGPDYHRPPVDTPAAWRIDPADSYWHPAAPARASLAP----------DWWKAFGDPR 160 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASIS-HRFIPNL 112 L+ L AL N ++ R AK + SV + +PS S A IS R + N Sbjct: 161 LDDLEVRALANNPSVQAIAARYGQAKAALASVASAQWPSVGVTAGASRARISADRPLTNY 220 Query: 113 KTNSTGQLDSDWKI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 ++ + +D +I DLFG+ RR +ES+ A+ D A + A+L + + L S Sbjct: 221 AQSNHSTVQNDVQIGATVSYEPDLFGRIRRSVESAQASTDQARDDLANARLVMTASLATS 280 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R I + + + L +K ++ + GA S L+L++ +A++ + + L Sbjct: 281 YLALRETDAEIDVLDRSVALQQKALDFVSAQHELGAVSGLNLMQQKAQLDATRTQAQLLL 340 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 H I+TL G PA F + Q+ L P + G+P+DL++ RPD+ E Sbjct: 341 NQRAQLEHAIATLAGTPAPTFSIPPRVQT------LAAPTLPAGLPSDLLQRRPDVASAE 394 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + +A + A+IG+A++ +P ++L+ G A + F + WS G L P+F+ G+ Sbjct: 395 RAMAAANAQIGVARAAYFPRITLSPTLGWDATRFASLFTAPSLLWSVGASLAQPLFEGGR 454 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I++ + A++ +++TVL A +EV+NA+T + + + Q AV+ ++ + L Sbjct: 455 IEAGVAYAQAGYAAAQANYRQTVLTAFEEVQNAVTGLTVLDEAERRAQAAVDDAQRLVGL 514 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y G + +D++ ++ E + Q A V L A+G G++ Sbjct: 515 AQDRYAGGLTAYIDVIGAQQQLLTSERQEVQIRGQRAALVVYLAKALGGGWS 566 >gi|322831532|ref|YP_004211559.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321166733|gb|ADW72432.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 467 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 110/467 (23%), Positives = 217/467 (46%), Gaps = 29/467 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 L I + + LLAGCT+ P+Y +P +P+ S + + W FN ++ + Sbjct: 8 LSLIGAFSLTLLAGCTMEPDYQRPALPVA----SNWDGAKTGAAQDIGWKAFFNQPAMKQ 63 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIPN--LKTNSTGQ 119 L+ ++L N + A ++ A+ RA L P+ AS +++ +P T ++G Sbjct: 64 LIGMSLANNRDLRVAALNVDTARATFQIDRAALLPTLDASAGETNQHLPGGLYSTQTSGP 123 Query: 120 LD----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + +++DLFG+ R + + L + A ++++++++ Y+ Sbjct: 124 VTYQQYSANLGVTSYEVDLFGRLRSLRDQGLETYLATEATQRATQISLVAEVASGYLSLA 183 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +A D KK+ EL+ + G + LV+ E +++ ++DI + R Sbjct: 184 ADNDLLKLAISTADSQKKSYELTKRSYDSGIDTSQDLVQAETTVRAAQADIAQYTRQVRQ 243 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 +V+ ++ L+G + L + Q + P G+P+DL+ RPDI E L Sbjct: 244 DVNALTLLVGTTIPQSLL----ANATLQQDWKFPQTPAGLPSDLLTRRPDIISAEHTLKA 299 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +PS++L G+ A T S F G WSF P + +PIFD G ++N Sbjct: 300 ANANIGAARAAFFPSITLTGT-AGTESGSLSKLFDGGTGAWSFMPSVNIPIFDGGVNQAN 358 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A+ + + +++ + A KEV + L K + Q + ++++ LS + Sbjct: 359 LDIAKDTKKIDIANYEKAIQTAFKEVSDGLAGQATYKDELLARQQDADANQRNYDLSQMR 418 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ G + L +L +R+ + L + + LY A+G G+ Sbjct: 419 FKGGVDNYLSVLVAQRSLYSAQQTLITTQLAQLNQDISLYKALGGGW 465 >gi|161521226|ref|YP_001584653.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189352599|ref|YP_001948226.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160345276|gb|ABX18361.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189336621|dbj|BAG45690.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 494 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 119/477 (24%), Positives = 211/477 (44%), Gaps = 43/477 (9%) Query: 13 VLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKLVK 66 LLAGCTVGP+Y P PT ID WW + +D L+ L+ Sbjct: 19 CLLAGCTVGPDYRGAPAASDTPTFVR----APATGIDAGAPAPSAWWHALHDRRLDALIA 74 Query: 67 IALQQN------------------------LTILQATERINAAKENILSVRADLFPSSYA 102 AL N L AT +E +S L PS+ + Sbjct: 75 AALAHNPDLHAAQARLRAARAQLAQQRAAELPKASATVAAIRMREPDVSTLGALLPSNGS 134 Query: 103 SISHRFIPNLKTNS----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 S L T + D+ W+IDLFG RR IE++ A D+ A + ++++ Sbjct: 135 GQSGSAPATLGTGPLQLYSAGFDATWEIDLFGGTRRAIEAASAQADAVDADLADTQVSIA 194 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ +Y+D R ++R++++ + +L ++ + L+ + +G + + +L ++++ + Sbjct: 195 AEVATAYVDLRDRQQRLALSRRTAELQQQMLALTQQRRARGVAADADIERLTTQVENTRA 254 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + L+ ++ ++ L G + + P L +G PA L++ RPD Sbjct: 255 SLIPLDAQVTESLDRLAILTGREPGALDAELSTDEASL-PTLPASAPVGDPAALLKRRPD 313 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 IR E++LA S A+IG +D +P ++L G I + + F N W P L I Sbjct: 314 IRAAERRLASSNAQIGEHIADYFPKVTLLGDIGFSATDPAHLFRKQNASWIGAPYLQWNI 373 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 D G+ + +R AE+S E +++ VL A+++ AL + V L Sbjct: 374 LDFGRTRGAVRAAEASRDEADANYRKAVLGALQDANTALQRYGHQRDHVVALTKVQASAT 433 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +L YR G S++D+LD +R + ++ A+ +L K YV + ++G G+ Sbjct: 434 HSATLMSERYRAGVASMIDLLDTQRESLAARQNVIAAQAELIKDYVSVQKSLGLGWQ 490 >gi|196228343|ref|ZP_03127210.1| RND efflux system, outer membrane lipoprotein, NodT family [Chthoniobacter flavus Ellin428] gi|196227746|gb|EDY22249.1| RND efflux system, outer membrane lipoprotein, NodT family [Chthoniobacter flavus Ellin428] Length = 469 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 116/458 (25%), Positives = 218/458 (47%), Gaps = 25/458 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKN-LINIDTLKWWESFNDTSLNKLVKI 67 L L+AGC VGP+Y +P P P + + ++ I D WW+ F+D L +L Sbjct: 14 LVAGLIAGCAVGPDYQRPSSPTPPGWGWKVAEPRDESIRGD---WWQLFHDPELTRLENQ 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRF------IPNL--KTNST 117 A N T+ A R++ A+ + + A F + +RF +P+L T +T Sbjct: 71 ATAANQTVQAAMARVDQARA-VARITASRFAPQIGFDPSLNRFHTQLNHVPSLLTATQTT 129 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 LD +++DL+G+ RR E+S A ++ A L + + +Y R + ++ I Sbjct: 130 LPLDLSYEVDLWGKIRRAFEASRAQAAASAADYYQVLLTLHGDVAANYFLLRQAEAQVEI 189 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + ++L +K +++ + G L + E+ + + +++ I+ L Sbjct: 190 LQRTVELRQKAVDIVAQRQQVGLAPAFDLDRARTELAQSNTTLTEMQRQRTTLRDTIALL 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G PA F H + P+ + G+P+ L+ RPDI E+++A + A+IG+AK Sbjct: 250 CGQPAPGF-HIASGKLERDIPS----VPTGLPSALVERRPDIAAAERRMAAANAQIGVAK 304 Query: 297 SDLYPSLSLNGSIALT--HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L G + + H ++ + +H + GP + +P+ + G++ + ++ A+++ + Sbjct: 305 AAFFPSITLTGDMGYSSFHASTLLDWESHLFQVGPAVTMPLLNGGRLTAGLKDAKANYRA 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +Q+ VL A KEV +AL +N K + AV ++ S Y+QG D Sbjct: 365 VCAGYQQQVLVAFKEVSDALVDVNSYAKQAGSEKDAVASSTRAADSSYERYQQGLVPYFD 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R + E+ + S V L A+G G+N Sbjct: 425 VLDSQRTQLQTELQAAQLNGLRLISTVHLIKALGGGFN 462 >gi|56476525|ref|YP_158114.1| outer membrane protein oprM precursor [Aromatoleum aromaticum EbN1] gi|56312568|emb|CAI07213.1| outer membrane protein oprM precursor [Aromatoleum aromaticum EbN1] Length = 475 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 116/469 (24%), Positives = 209/469 (44%), Gaps = 47/469 (10%) Query: 18 C-TVGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 C T+ P+Y +P P+ P F S + D L W + F L +L+ +AL N Sbjct: 19 CSTLAPDYQRPPAPV-PASFPQAPDTLSARVPAADALPWRDFFAAPGLRELIALALDNNR 77 Query: 74 TILQATERINAAKENILSVRADLFPSSYASI---SHRFIPNL-KTNSTGQLDSD------ 123 + I A+ RADLFP+ AS + R +L + +S G + D Sbjct: 78 DLRVTALNIERARAQYRIQRADLFPAIGASGGQNAQRLPADLVRGSSGGNANGDARISRQ 137 Query: 124 ---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W++D FG+ R + E +L A++++++++ +++ +ER Sbjct: 138 YSATIGFSVWELDFFGRLRSLNEQALELYLGTEEARRSAQISLVAEVANAWLTLAADRER 197 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A +++ EL+ F GA S L L + E TL++ R + Sbjct: 198 LALARNTYRTRQESYELTRRSFEAGAVSALDLRQAE-----------TLQEDARADAARF 246 Query: 234 STLLGYP--ATEFLHYMQKQSNNFQPNL------YIPINIGIPADLIRNRPDIRYQEKKL 285 + L+ A L M+ P L + G+P++++ RPDI E++L Sbjct: 247 TALVAQDENALALLAGMRVPPELLPPQLAGTMTAVAELPAGVPSEVLVRRPDILEAERRL 306 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +PS++L GS + T D F + WSF P++ +PIF+ G++++ Sbjct: 307 RAANANIGAARAAFFPSITLTAAAGSASSTLDGLFSSGSGTWSFVPQIRIPIFEAGRLRA 366 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ AE ++ + A +EV +AL + + + V+ +S LS Sbjct: 367 NLDVAEIQRDINVAQYERAIQGAFREVADALAERATLAEQLDARRRLVDATAESFRLSEA 426 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S L +LD +R ++ L + A + + LY A+G G+ Sbjct: 427 RYKGGVDSYLGLLDAQRTLYDAQLQLIAVRESDAANRIALYKALGGGWQ 475 >gi|317485661|ref|ZP_07944533.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] gi|316923095|gb|EFV44309.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] Length = 1030 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 113/454 (24%), Positives = 204/454 (44%), Gaps = 23/454 (5%) Query: 19 TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQA 78 T+GP+Y +P + L + L + +WWE F+D +LN+L + AL N + QA Sbjct: 573 TLGPDYKRPDLDLPAASVAADEPGALFTRE--RWWEVFHDGALNRLEEAALAHNSNLAQA 630 Query: 79 TERINAAKENILSVRADLFPS-------------SYASISHRFIPNLKTNSTGQLDSDWK 125 R+ A+ AD P+ ++H + + ++ Sbjct: 631 MARVEEARAAAGVAFADRLPAVGLRSQDGKRLMTEGEELAHHYASRTQEAYKAVGFLSFE 690 Query: 126 IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL+G+ R + E++ A L S A D +L V S+ +Y R +E+ IA +L Y Sbjct: 691 LDLWGKYRRLDEAARAELLSTEAARDTIRLAVASETALAYFQLRTLQEQERIAADMLKSY 750 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ ++ ++ G + + +L + AE ++ + LE+ ++ L G+ Sbjct: 751 ERTCKVYETRYRLGQSPETTLRRFAAERDKTQAQLYDLEERRIRCEGALAVLAGFSPAGI 810 Query: 245 LHYMQK--QSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + Q L P ++ GIP+DL++ RPD+R E +L + A+IG A++ + Sbjct: 811 VDGAGRAFQEGRTLGELAPPPDVPSGIPSDLLQRRPDVRSAEGRLMAANARIGAARAAFF 870 Query: 301 PSLSLN--GSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS SL G + TH D F W L P+F+ G++ + R AE+ +E Sbjct: 871 PSFSLTAEGGYSSTHLDRVFLDPARIWGVMGGLAQPLFEGGRLTAKQRMAEAKYEEARAA 930 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + +V NA E +AL +K + V+ +S + Y G S++D+LD+ Sbjct: 931 YVGSVRNAFTETRDALAGNRISRKALAASTERVKELTRSNEIMEKQYDAGLSSVMDLLDV 990 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + + A+R+ + V L A+G G+ Sbjct: 991 RRQLLAARQEQAEARRRQLAAVVGLCKALGGGWT 1024 >gi|317049351|ref|YP_004116999.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316950968|gb|ADU70443.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 468 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 40/460 (8%) Query: 17 GCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GCT+ P Y +P MP+ PT ++GN + L W F D ++ L++++L Sbjct: 21 GCTMEPHYQRPSMPVDAHYDQPT--AVGN------VADLPWQNFFADATMRNLIQLSLDN 72 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKTNSTGQLD------ 121 N + A + A+ ++ RA L PS A+ S H T +TG + Sbjct: 73 NRDLRVAALNVEEARNDVTVQRAALMPSIDATASQTSAHEPGNLYNTKTTGPVTYHELNA 132 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERISI 176 + W++D FG+ R + + A + A ++++IS++ +++ + + + Sbjct: 133 GLGVTSWELDFFGRLRSLRDQAQETYLSTAATERATRISLISEVATAWLTLCSDNDLLHL 192 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + L+ + + G +S L + E+ +++ E+D+ + + R +V + L Sbjct: 193 AQSTAQSQQDSYRLTKMSYDGGVSSDQDLAESESTVRAAEADVASYTRQVRQDVDALRLL 252 Query: 237 LG--YPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +G P + H + N P G+P+DL+ RPD+ E L + A IG Sbjct: 253 VGTDLPVSLLSHA------SLDANWQFPATPAGLPSDLLTRRPDVMAAEHTLKAANANIG 306 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +PS++L S T + WSF P + LPIFD GK ++N+ A Sbjct: 307 AARAAFFPSITLTASGGSTSSSLGSLLGAGTGAWSFVPSINLPIFDGGKNQANLNIAHIE 366 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + + +++ + A KEV +AL + + +T LQ V +++ S + Y+QG + Sbjct: 367 KRIEIANYEKAIQTAFKEVNDALAGQDTWQDQMTALQKEVGANQRDYDYSELRYKQGVDN 426 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++L +R+ + L A + LY A+G G+ Sbjct: 427 YLNVLVAQRSLYSAQQSLISAHLGQLSQKITLYKALGGGW 466 >gi|294667838|ref|ZP_06733048.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602464|gb|EFF45905.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 480 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 39/466 (8%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + L+GC ++ P+Y +P P+ S GN+ + N L W + D L ++V +AL Sbjct: 15 IALSGCVSMAPQYARPDAPVPSVIGSTGNADTGMPNAAALDWRQVVTDARLQQMVALALD 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------IPNLKTNSTGQ 119 N + A I A+ RA+LFPS A++SH + +++G+ Sbjct: 75 NNRDLRVAVLAIEQARAQYRIQRANLFPSVDATVSHTAQRAAAATSFTGAAQIIRSASGE 134 Query: 120 LD-SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + S W++DLFG+ R + ES LA+ + + +L++++++ ++ ++R Sbjct: 135 VGVSSWELDLFGRIRSLNNEALESYLASEQTQRS----TRLSLVAEVANDWLTVAADQQR 190 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP--TLEKSFRMNVH 231 +++A Q LD +K + ++ L+ G S L L +++ ++S +D+ T + + N Sbjct: 191 LALAQQTLDSQRKTLRMTELQHDNGIVSGLDLAQIQTSVESARADVANYTTQLAQSRNAL 250 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVA 290 N+ + P + S+ + + + P+ + + ++ RPD+ E L + A Sbjct: 251 NLVVGMSVPVA-----LLPASDAIETGVALAPLPAQLESRVLLQRPDVLSAEHTLKAANA 305 Query: 291 KIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG ++ +P++SL GS AL+ + F G +T WSF P + +PIF G +K+ + Sbjct: 306 DIGATRAAFFPTISLTANAGRGSDALS--SLFDGDHT-WSFSPSVSVPIFRAGALKAELD 362 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + A EV +AL + ++ + Q V+ ++S SLS YR Sbjct: 363 VAMLQKDITIAQYELAIQTAFSEVADALAERTQLEERMHAQQAMVDAAQRSFSLSDARYR 422 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L LD +R + L + A + V LY +G G + Sbjct: 423 NGVDSYLVALDAQRTLYSAQQTLISLRLTEASNRVTLYKVLGGGAD 468 >gi|229591549|ref|YP_002873668.1| outer membrane efflux lipoprotein [Pseudomonas fluorescens SBW25] gi|229363415|emb|CAY50591.1| probable outer membrane efflux lipoprotein [Pseudomonas fluorescens SBW25] Length = 464 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 217/460 (47%), Gaps = 22/460 (4%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKI 67 L + LAGC + P+Y +P P+ K + D + W + F D L +L + Sbjct: 9 LAAMALAGCVNLAPQYERPEAPVSEQWLPAAQLPKGQVGAD-IHWQQFFTDRRLAQLQAL 67 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNS--------- 116 AL N + A+ + A+ RADLFP+ AS+S H P +N+ Sbjct: 68 ALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDASVSGTHSRTPGSLSNTGTAVTTHDY 127 Query: 117 TGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + QL S +++D+FG+ R++ + +L + + ++++++++ +++ ER+ Sbjct: 128 SAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAWLTLAADNERL 187 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L +L+ +T G +S LS+ + + ++S D + E + + + Sbjct: 188 LLAQETLTSQLATYDLTQRSYTLGGSSALSVAQAQTTVESARGDAASYESQILQDRNALR 247 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G E L + ++ + + I G+P+ L++ RPD+ E L + IG Sbjct: 248 LLVGSDLPEALLPGTRLESS---AVLVDIPAGLPSSLLQQRPDVLSAEHTLKSANIDIGA 304 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ YPS++L GS + F + W+F P + +PIFD G ++ + A+ Sbjct: 305 ARAAFYPSITLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATLDSAKVER 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + Q T+Q+T+ A +EV +AL + + + Q + +KS LS YR G S Sbjct: 365 EIQVQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALYRGGSQSY 424 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ LD +R+ + DL + + + LY +G G+N Sbjct: 425 LEALDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGGWN 464 >gi|152983704|ref|YP_001347010.1| putative outer membrane efflux protein [Pseudomonas aeruginosa PA7] gi|150958862|gb|ABR80887.1| putative outer membrane efflux protein [Pseudomonas aeruginosa PA7] Length = 495 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 119/463 (25%), Positives = 224/463 (48%), Gaps = 33/463 (7%) Query: 12 IVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVK 66 +LLAGC VGP+Y+ P + P F ++ +D + WW ++ +L +L++ Sbjct: 15 FLLLAGCAAVGPDYSPPARAV-PASFG----ASVAGLDGAGVEVAWWRGLDEPALVELIQ 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST------- 117 AL N I A R++ AK + R + P + + R ++T S Sbjct: 70 RALAANHDIALAAARLDEAKALLRESRQEFLPRGGPAFDYQNRRRGEVETPSGEPRDIET 129 Query: 118 --GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G LD+ W+IDLFG+ RR +E++ A S A + + +V + + ++ + R + + Sbjct: 130 YRGALDAAWEIDLFGRVRRSVEAAEAQAGSRQALLRNVQASVAAAVAATWFELRGLEAEL 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ I + ++E+ GA + ++ EA ++++E+ +P LE+ + + ++ Sbjct: 190 AVVEDIRHNQRDSLEMVERLVGAGAAHEFDRLRAEALLRNVEAALPDLERRRAASRNALA 249 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL F+ S L + I +G PA L+ R DI E+ LA + A+IG Sbjct: 250 ILLAETPQTFVPPPAGASRE---TLALRSIGVGDPAGLLARRADIAAAERDLAAATARIG 306 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAESS 350 + + LYP + + GSI L + + +F P + + D+G++++ I +E+ Sbjct: 307 VETAGLYPQVQVQGSIGLVAGDLDALDESGATFSLLNPVIRWALLDRGRVRARIAASEAR 366 Query: 351 AQEQYITWQETVLNAIKEVENALTSINE--DKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 A+E I + +TVL A++E ++A D + L+ A ++++ L+ + QG Sbjct: 367 AREALIRYDQTVLRALQETDDAFKGYGAAGDTLRLRLLESAA--NREAARLARERFVQGD 424 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L+ ER+ LSIA+ + + VD+Y A+G G+ Sbjct: 425 GEYLDVLEAERSDYLSRRALSIARTRQRLAIVDIYKALGGGWE 467 >gi|299068271|emb|CBJ39492.1| putative outer membrane efflux protein [Ralstonia solanacearum CMR15] Length = 480 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 101/438 (23%), Positives = 200/438 (45%), Gaps = 34/438 (7%) Query: 13 VLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDT-LKWWESFND 58 V+L GC VGP++ P P LP + G +++L + WW F Sbjct: 15 VVLGGCAVGPDFKAPAPPAASGYTAQPLPAATASAPVPGGEAQHLAEANVPADWWHLFQS 74 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---NL 112 +L+ LV AL+ + T+ QA R+ A+ + + PS S +++ + P Sbjct: 75 PALDALVDEALRASPTVAQAAARLREAQAQADAQFGAVLPSVDGSASAVRQQVNPEAFGF 134 Query: 113 KTNSTG-------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T G L + +DLFG RR +E+S A +D+ +++ A+L++ ++ + Sbjct: 135 NTPKPGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDTQRYELEAARLSLAGNVVTAS 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +I+ ++L + + ++ +F G +++ ++ ++ E+ +P L + Sbjct: 195 VRIASLDAQIATTQRLLAAQRDQLVITERRFDAGGVARVDVLSQRTQVAQTEATLPPLAQ 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 255 QAAQARHRLSVLLGREPGAGLPDLPPLDALRLPD---PLPVSLPSTLAQRRPDIRAAEAM 311 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 ++ A +G+A ++L+P ++L+ GS N ++ W+ G L P+F G ++ Sbjct: 312 WHEASANVGVATANLFPRITLSAALGSETTGFRNLLGAGSSIWNLGGSLTQPLFHGGTLR 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R AE++ ++ VL ++EV +AL +++ D + + A + +++ Sbjct: 372 ARKREAEAAYDAAGAAYRLAVLQGLQEVADALHAVHNDARTLQARALATDQATQTLRAEQ 431 Query: 402 INYRQGRYSLLDILDIER 419 Y G S L +LD +R Sbjct: 432 ARYAAGGISTLALLDAQR 449 >gi|258542427|ref|YP_003187860.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256633505|dbj|BAH99480.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256636564|dbj|BAI02533.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256639617|dbj|BAI05579.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256642673|dbj|BAI08628.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256645728|dbj|BAI11676.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256648781|dbj|BAI14722.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256651834|dbj|BAI17768.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654825|dbj|BAI20752.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 482 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 121/485 (24%), Positives = 225/485 (46%), Gaps = 54/485 (11%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFND 58 R L +LL C++ P+ + P + L P Q S G ++ L WW++FN Sbjct: 11 RIALLLSAMLLGACSLQPKTSLPTVALPQTWENAPAQQSYGKTQKL-------WWQNFNQ 63 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISH 106 LN L+ + LQ+N+ I A E++ A++ A P +S A I Sbjct: 64 PKLNDLISVGLQENIDINLAYEKLQASRIETKIAYAANMPEINGTAGYSRNYTSTAGIGD 123 Query: 107 RFIPNLKTNSTGQ---------------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVD 150 P L + G + + W++DL+G+ + + + AN + +D Sbjct: 124 VLRPLLGLDQGGSYLEPKGVSYSNFNTGMFASWELDLWGRYKLMRKVADANRQAFQDDID 183 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 L+ +++ Y + + + + + D+ K+ ++++ + +G S+ L++ Sbjct: 184 AVSLSFEAEICRLYFLWVNLTQMVEVEKKASDILKEVENINNVSYQRGLISQTVLLEQSN 243 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI---PINIGI 267 + + + L+ + + V ++L Y + L M + +F P Y P + I Sbjct: 244 QFQKVFMKYQELDNA-QQAVRRALSMLVYNRPDALSVMDQ---SFSPIDYTQITPAPLKI 299 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALT-HDNSFPGYNTH 323 P+ L+++RPDIR E++L + A +GIA++D YP ++ +G + ALT + + NT Sbjct: 300 PSVLVKSRPDIRAAEQRLHAASAMVGIARADFYPRITFSGELSIDALTLTEFGWGARNTQ 359 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 FGP L LPIF+ GKI + +S + + ++ TVLNA KE E+AL + N + Sbjct: 360 --FGPTLTLPIFEGGKIARQVELRKSELKSAGLEYKRTVLNAWKETEDALANYNMTRAQY 417 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 E K S +YR+G S ++ L + A+ +V+L +++L ++Y+ LY Sbjct: 418 GNAVQMAENAKISAKRVGASYRRGDESKVEFLLSQLASLDGKVELLNMQQRLMENYIRLY 477 Query: 444 IAIGS 448 + G Sbjct: 478 VVSGG 482 >gi|167551851|ref|ZP_02345604.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323456|gb|EDZ11295.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 492 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 114/472 (24%), Positives = 222/472 (47%), Gaps = 37/472 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVTDESEINRRYEA 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELS-HLKFTQGAT------SKLSLVKLEAEIKSIESDIPTLEKS 225 + + L K + L+ L T AT ++++L E ++S E + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRMAEIALRSAEINRAAYTRQ 254 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEK 283 + + + LLG P T L ++ IP + G+P+DL+ RPDIR E Sbjct: 255 LARDRNALELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEY 313 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGK 339 +L + A+IG A++ +P++SL GS A T S G + W F P++ LP+F G Sbjct: 314 RLRGANARIGAARAAFFPTISLTGS-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGA 372 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++++ RA Q + ++ + A ++V + L V Q AVE + + L Sbjct: 373 LRADLDRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYEL 432 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + +++G L +LD R + L + + ++LY A+G G+ Sbjct: 433 AGLRFQEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 484 >gi|77458366|ref|YP_347871.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382369|gb|ABA73882.1| putative outer membrane component of multidrug efflux system [Pseudomonas fluorescens Pf0-1] Length = 517 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 113/429 (26%), Positives = 207/429 (48%), Gaps = 38/429 (8%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISH 106 D +WW+ F D L++L+ A +N ++ A R+ A+ + + +P AS Sbjct: 59 DLRQWWQVFADPVLDRLISDAEARNSSLKIAGLRVLEARAQLGIADSGRYPQLQQASADS 118 Query: 107 RFIPNLKTNST-----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 +I ++ T D W++D +G+ R IES+ A+ +A A + A + Sbjct: 119 LYIDRHQSGGTNPQDLHFWQHSAAFDVGWELDFWGRFSRAIESADASYFAAQANYEDALV 178 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + +++ +Y R + R+ +A + K+N E++ F G T++L L + + Sbjct: 179 LLRAQVADTYFALRTTEARLRVARENAAQQKRNFEITEKLFRSGQTAELDLQQARTQYLG 238 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIP-----INIGI 267 S IP E + ++ L+G P FL QP L IP + + Sbjct: 239 TLSSIPAFEDQLLRTRNALAVLVGQPPGGAAFLAE--------QPGL-IPLVDRAVLQDV 289 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWS 325 PA+L+ RPD+R E +A A +G+A++DLYPSL+L GSI + D + P + Sbjct: 290 PANLLLRRPDVRAAELNVAAQSALVGVAETDLYPSLTLLGSIVWSSDTLGATP-RSLDLI 348 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA---LTSINEDKKI 382 GP L +FD G+I +NIR ++ Q+ +++ V A +E ++A LT E ++I Sbjct: 349 GGPSLRWNLFDYGRIHNNIRVQDARLQQLIEAYRDKVRQAAREADDAASGLTKALERERI 408 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + + A ++S+ L+ YR+G +LD +RA +++ + +++ + + L Sbjct: 409 LGEAEGAA---RRSLVLANTQYREGYSDFQRVLDAQRALLELQDNYLVSRSNAVSNLIAL 465 Query: 443 YIAIGSGYN 451 Y A+G G+ Sbjct: 466 YRAVGGGWQ 474 >gi|170736664|ref|YP_001777924.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169818852|gb|ACA93434.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 467 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 185/423 (43%), Gaps = 23/423 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW ++D L+ LV+ AL QN + A R+ A+ A P + A + Sbjct: 47 RWWRLYDDPVLDGLVRDALAQNRDLAAAVARVERARAVFDEAGAARLPDTTAGFGVDYGK 106 Query: 108 FIPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDSAYAQVDIA-KL 154 P+ + D+ W++DL+G+ RH+ + A A ++ Sbjct: 107 HAPDQIVAAAKDTDARTRWGFAPSFSLSWEVDLWGRVRHLVDAAQADADAVQAASDAMRV 166 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ +Y + ERI +A Q + + + L+ + G S L + + A Sbjct: 167 VVAAETTAAYAQVCAYGERIDVAEQSVGIADRLAALTAKQRAHGLVSDLEVARSRAFADD 226 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +D+P L S R ++ ++ L G A L P L P +G A L+R Sbjct: 227 TRADLPALVGSRRAALYELAVLTGR-APGALPDAAAHCRT-APVLARPFPVGDGASLLRR 284 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-----YNTHWSFGPK 329 RPD+R E++LA + A+IG+A ++LYPS+SL GS+ P Y W GP Sbjct: 285 RPDLRESERQLAAANARIGVATAELYPSISLGGSVNWLSTGGDPSTLGDKYAIAWGVGPL 344 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + + ++ + +A + + VL A+KE E AL + L+ A Sbjct: 345 ITWRFPNMAASRARLAQARADDTLARAQFDAQVLRALKETEQALARYGAAWRRRAALETA 404 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 H ++ L+ +NY G L +LD +R+ V+ L+ + +Q++ V ++ A+G G Sbjct: 405 RAEHARAYRLAELNYEAGALDFLGVLDAQRSLVAVDSALAESTQQVSLDQVAVFKALGGG 464 Query: 450 YNP 452 + P Sbjct: 465 WQP 467 >gi|313202328|ref|YP_004040986.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312441644|gb|ADQ85750.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 467 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 113/460 (24%), Positives = 221/460 (48%), Gaps = 30/460 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++LAGC + P+Y +P P+ P Q+ + K L W + F D L KL++ A Sbjct: 13 LMLAGCMNMQPKYERPAAPI-PAQWPATADAVQKQATAPAVLGWEQFFTDPDLKKLIRQA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQL------ 120 L+ N + +T I A+ RADLFP ++ S S++ P + + L Sbjct: 72 LENNRDLRVSTLNIEKARAQYQIQRADLFPKINATGSGSNQRTPAAASTTGTTLLTHQYS 131 Query: 121 ----DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S +++D FG+ R + + ++ S A++ +++++ +Y+ E + Sbjct: 132 ANLGFSSYELDFFGRVRSLRDQAVYQYLSTEEAKRSAQITLVAEVANAYLTMVADMESLE 191 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L +++ +++ + G+ ++L+L + E ++S +D+ + + + Sbjct: 192 LARQTLRTQRESYDMTKRQLEFGSVTELTLRQAETSVESARADVAKYMTQVDQDRNALVL 251 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G L M+ Q + + G+P+ +++NRPD+ E+ L A IG A Sbjct: 252 LVGTAPEVNLDEMRSLKAVSQTAI---LPDGLPSTVLQNRPDVLEAERDLQGYNANIGAA 308 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P++SL S + + + F G N WSF P++ LPIF+ G K+N++ AE + Sbjct: 309 RAAFFPTISLTASAGVASNELGSLFNGSNRAWSFAPQIVLPIFNAGLNKANLKVAEVNRD 368 Query: 353 EQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +++ + A KEV ++L ++ E T L +A E +S +LS + + +G Sbjct: 369 ISVAQYEKAIQTAFKEVSDSLAQRATLEEQLSAQTALVNATE---RSFTLSRLRFEKGLD 425 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L +LD +R+ + +L + + V LY +G G Sbjct: 426 NYLTVLDAQRSYYSAQQNLITVRLSDVSNQVTLYKVLGGG 465 >gi|325983690|ref|YP_004296092.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosomonas sp. AL212] gi|325533209|gb|ADZ27930.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosomonas sp. AL212] Length = 470 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 126/471 (26%), Positives = 225/471 (47%), Gaps = 36/471 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +R + L ++LL C +GP++ +P + +F + + +I ++WWE D +L Sbjct: 5 IRQLSILPVLLLTACAMGPDFIRPQVET-AEKFRLSEMEGE-SIANMRWWELLQDETLQH 62 Query: 64 LVKIALQQNLTILQATERINA--AKENIL------SVRADLFPSSYASISHRFIPNLKT- 114 L++ ALQ+N + +A + A+ I +V D + ++ IP T Sbjct: 63 LIRQALQENKDLKRAIASVEEFEARSRIAFMGFVPNVDYDASAPVFGTLGGFGIPGFPTP 122 Query: 115 -NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 N G+ +W+ID++G+ RR E++ A L + L +IS + SY D F Sbjct: 123 FNYFGRTTLNWEIDIWGRIRRSNEAARAELMAREENRRAIILALISAVAQSYFDLLQFDI 182 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IAH+ L +++++ +S + G S+L L + EAE + S + +E+ + Sbjct: 183 QLDIAHRALSSWEESVAISRAQLQGGIISRLDLDQFEAERANAASRVAEIERRVVQKENE 242 Query: 233 ISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 +S LLG A H + +Q IP + G+P++L++ RPDI E+ LA + Sbjct: 243 LSVLLGRNPVAVARRHLLTEQ--------VIPPEVPAGLPSELLQRRPDILQAEQALAAA 294 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI---- 344 A+IG AK+ +P LS+ G + + P + G + + N Sbjct: 295 TARIGAAKAARFPKLSITGFLGVAS----PALSNLLLSGSEFGVGGLGLAGPLLNAQSLG 350 Query: 345 ---RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R AE+ A++ +++T+L A KEVE+AL +I + + + VE ++ ++ Sbjct: 351 FEQRAAEAQAKQALAQYEQTILIAFKEVEDALVAIRTIGEQLKAQRQQVEALHSALRVAD 410 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y+ G S +D+L +R E LS A+R S V LY A+G G+ P Sbjct: 411 LRYQGGITSYVDVLLAKRNLFDAEFSLSAAQRFHLVSVVQLYNALGGGWAP 461 >gi|94968749|ref|YP_590797.1| ABC efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] gi|94550799|gb|ABF40723.1| ABC efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] Length = 421 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 108/411 (26%), Positives = 195/411 (47%), Gaps = 40/411 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL--------PTQFSIGNSKNLINIDTLK------ 51 I ++ L GCTVGP Y P P + PT+ K+ + T+K Sbjct: 8 GIVAVVAGALTGCTVGPRYHAPARPSVGTYTPEPQPTKTVQSAGKDGAS-QTIKRSSDIP 66 Query: 52 --WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI-LSVRADLFPSSYASISH-R 107 WW F L+++V AL + T+ QA R+ A+E A +P+ A+ S R Sbjct: 67 AEWWTVFQSPQLDRMVHEALANSPTLAQANARLKQAQEESNAQTGAAKYPTVSANGSATR 126 Query: 108 FIPNLKTNST------------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKL 154 NL T G + + +D+FG +RR IE A ++ Q+ A+L Sbjct: 127 EKLNLATFGVPFPSPGPFTLLNGSVVVSYALDIFGAKRRLIEGLNAQVEFQEWQLQGARL 186 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + I + ++ +L L +K++ ++ ++ G S+ + + + Sbjct: 187 MLAGNVASAAIRQAEVRAQMDATRSLLALQEKSVSIAEKRYAAGGFSEYDVRSQQRTLAE 246 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLI 272 I++ +P LE+ H ++ L+G E +Q S N L++P + + +P++++ Sbjct: 247 IQASLPPLEQQLDSLNHQLAFLMGKTPAE--AQVQALSLN---GLHLPQELPVSVPSEMV 301 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 R RPDIR E L + A +G+A ++LYP ++L+GS A SF W+ G L Sbjct: 302 RQRPDIRAAEALLHQASANVGVATANLYPQITLSGS-AGGIGTSFTEGGAVWNVGASLSQ 360 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 PIF+ G++++ R+A ++ E T+++TVL + +EV + L +I D + + Sbjct: 361 PIFNGGQLRAEKRKAVAAYDEAGATYRQTVLESFREVADVLRAIEHDAQTL 411 >gi|170699233|ref|ZP_02890284.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170135837|gb|EDT04114.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 480 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 223/481 (46%), Gaps = 53/481 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNS------KNLINIDTLKWWESFN 57 ++ + VLL GC+ P Y H P++ P F G + + IN D WW+ F Sbjct: 7 SVLLITAVLLTGCSFAPVY---HPPVIETPATFKEGGAWQPATPADRINRD--GWWKLFR 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISH 106 D +L++L + N TI A R + A + ++A+ FP+ ++++ Sbjct: 62 DPTLDQLETRLNRANPTIAVALARHDEAAAELSEIKANRFPTLQLGVNGTRSRAFSAEPR 121 Query: 107 RFIPNLKTNSTGQLDS--DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLI 161 R + T ST + D+ +DL+G+ R+ + A D+ AQ D +L++ + L Sbjct: 122 RDGNQVSTYSTDTIGVGLDYDLDLWGKVRN--AVEAGEDALQAQTDDLAAVRLSMQASLA 179 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y R + +Q +D ++ + L+ + G S L + + + ++ S+++ Sbjct: 180 KAYFRLRESDSERRLLNQTIDAAQRAVTLTQNRHAGGIASGLDVSRAQTQLDSLQAKAQD 239 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN---LYIP-INIGIPADLIRNRPD 277 + + H I+TL+G P F P Y+P I G+P L++ RPD Sbjct: 240 IVARRALIEHVIATLVGVPPASF---------TLAPAGAPAYLPAIPTGLPTTLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPI 334 + E+++A + A+IG+A + +P ++L + D P N W+ GP+L + + Sbjct: 291 VAAAERRVAQANAQIGVASAAFFPDVTLGLAGGFQSDALMPWMTAPNAIWAIGPQLVMNL 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ ++ + + E ++ L A ++VE+ L ++ + A+ + Sbjct: 351 FDGGQRRAVTQAMRAKLAENGARYKVIALRAFEQVEDNLARLHHLGDEAAEEDKALAAAR 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK---RQLAKSYVDLYIAIGSGYN 451 ++ L+M YR G S L+++ + T +++ D+++ K R+L + L A+G G+ Sbjct: 411 HTLDLAMSRYRDGVVSYLEVVTAQ--TTELDTDMAVQKLETRRLC-ACTQLIEALGGGWR 467 Query: 452 P 452 P Sbjct: 468 P 468 >gi|168237453|ref|ZP_02662511.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737220|ref|YP_002113379.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712722|gb|ACF91943.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289563|gb|EDY28926.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 485 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 109/464 (23%), Positives = 216/464 (46%), Gaps = 28/464 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEA 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMAFDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LLG P A E + + + + + G+P+DL+ RPDIR E +L + A+ Sbjct: 255 LELLLGQPLAPELSRRLNEAVTLTEGTIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANAR 314 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ RA Sbjct: 315 IGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDRA 373 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 Q + ++ + A ++V + L V Q AVE + + L+ +++G Sbjct: 374 HVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGFRFQEG 433 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD R + L + + ++LY A+G G+ Sbjct: 434 IDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|329910594|ref|ZP_08275335.1| Outer membrane protein [Oxalobacteraceae bacterium IMCC9480] gi|327546143|gb|EGF31196.1| Outer membrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 479 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 129/475 (27%), Positives = 217/475 (45%), Gaps = 29/475 (6%) Query: 2 NILRAIFSLFIVLLAGC--TVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTL----KWW 53 I A+ ++ LAGC VGP+Y P ++ P + S D +WW Sbjct: 4 GIGAALLVAGVITLAGCGTVVGPDYRVPAQAVVRQPAASAAFASAAEAAFDARALPPQWW 63 Query: 54 ESFNDTSLNKLVKIALQQN---------LTILQATE----RINAAKENILSVRADLFPSS 100 + D +L+ LV A N L LQA + R+ ++ + A PS+ Sbjct: 64 RLYQDPTLDGLVARAFAANTDLRVAAANLARLQALQVEAARLGRPDISVHAAPAYGRPSA 123 Query: 101 YASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 A +P + TG + +++DLFG+ R IE++ A+ +A A +D+A++ V ++ Sbjct: 124 AALGRDAPLPASWSQDTG-VTMSYQLDLFGKIARTIEAAGADSAAAQAALDLARVTVAAE 182 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +Y+DA ++I +A + L ++ ++L+ + G + L + + ++ + + + Sbjct: 183 TARAYVDACAAGQQILVARHSVALQQQFVKLTGQRIAAGRGNALDESRAQGQLDQLRAAV 242 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P L R ++ L G P T + + P L I +G A L+R RPDI Sbjct: 243 PPLLGQHRTAQFRLAVLTGDLPGTLSANI---DECHIPPRLQQAIPVGDGAALLRRRPDI 299 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPIFD 336 R E+ LA + A+IG+A S LYP + L S + G + HWS GP + + Sbjct: 300 RQAERNLAATSARIGVATSALYPDIQLGLSGGSSGSLGQFGTASSLHWSLGPLISWTLPA 359 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +S I +AE+ + TVL A++EVE+ALT + L A + ++ Sbjct: 360 TGSARSRIAQAEAGNSAALARFDGTVLKALREVESALTVYARELDRNAALHDARDQGARA 419 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +R GR L LD ER A E L+ + LA V L++A+G G+ Sbjct: 420 SEQAATLFRHGRTDFLTTLDAERTLASAESQLASSDALLASEQVTLFLALGGGWE 474 >gi|226946444|ref|YP_002801517.1| multidrug efflux pump outer membrane lipoprotein [Azotobacter vinelandii DJ] gi|226721371|gb|ACO80542.1| multidrug efflux pump outer membrane lipoprotein [Azotobacter vinelandii DJ] Length = 506 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 115/456 (25%), Positives = 219/456 (48%), Gaps = 22/456 (4%) Query: 14 LLAGC-TVGPEYTKPHMPLLP---TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 +L GC +GP++ P + ++ S + D +WW D L++L+ A Sbjct: 15 VLGGCIRLGPDFQSPREAWVDHWDSEMLARASAMRVQPDNRQWWTGLGDPLLDRLIAHAD 74 Query: 70 QQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-QLD 121 + N L IL+A R+ A + + + H++ L + Q D Sbjct: 75 EHNPDLRIAGLRILEARARLGIALSGLSPQLRQVTAEALYLDRHQYGGRLPQDRHAWQYD 134 Query: 122 SD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + W++D +G+ R IES+ A +A A + + +++ +Y R + R+ I Sbjct: 135 AGFSIGWELDFWGRYSRAIESADAAYFAAQADYQDVLVLLRAQVAQTYFVLRTAEARLRI 194 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + K++ E++ F G + +L L + + + S +P E R + +S L Sbjct: 195 ARENTERQKRSFEITERLFLSGNSDELDLQQAKTQYLGTLSTVPEFEALVRQTRNALSVL 254 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + L + +Q+ P L + +PA+L+ RPD+R E ++A A++G+A+ Sbjct: 255 VGEP-PDALPELTRQTG-LVPLLDRALLDDVPANLLLRRPDVRAAELQVAAQSAQVGLAE 312 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +DLYPSLSL GSI + +S G + F GP L +FD G++++N+R ++ Q+ Sbjct: 313 TDLYPSLSLLGSIGWSA-SSLDGSSDTRDFIGGPSLLWNVFDNGRMRNNVRVQDARLQQL 371 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++ V A +E ++A T + + + L+ A +++++L+ YR+G + Sbjct: 372 IEVYRDRVRQAAREADDAATGLVKALERERILREASISAQRALTLASAQYREGYTDFQRV 431 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +RA + + + S +DLY A+G G+ Sbjct: 432 LDAQRALLAQQDSYLVTRNSAINSLIDLYKALGGGW 467 >gi|260753174|ref|YP_003226067.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856224|ref|YP_162020.2| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|258552537|gb|ACV75483.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775219|gb|AAV88909.2| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 512 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 121/478 (25%), Positives = 218/478 (45%), Gaps = 44/478 (9%) Query: 9 SLFI---VLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNL------INIDTLKWWESF 56 +LF+ +LLAGCT+ P+Y +P P P ++ + N + D L W + F Sbjct: 23 TLFLSTNILLAGCTMAPKYHRPAASVAPQWPKSAALPAADNTSMKPHPMAAD-LGWQDFF 81 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------------- 99 D L L+ IA+++N + A + I A+ RA L P+ Sbjct: 82 KDARLKALITIAIRENRDLRSAIQAIGEAQARYRVQRASLLPAIGGTGEVMYQQPSGKSG 141 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LN 155 S+A IP S G S ++ID+FG+ R + A + A Q + A+ + Sbjct: 142 LSFAPGVGEDIPRFHYYSMGIGFSSYEIDIFGRIRSLSKEAA--ERALMQEETARGTLIT 199 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +IS++ SYI +E +++A + K+N++L+ G S L++ + E + Sbjct: 200 LISQVANSYIAWLADRETLNLAEESYQAAKRNLDLTQALLDHGEASLLTVNQAETLFQQK 259 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRN 274 ++ +N+ L+G + L F + N+ ++ G+P+DL+ N Sbjct: 260 ADLREQAKRQMAWEENNLVLLIG----QPLPDNLPPPLPFGEQNIIEDLSPGLPSDLLEN 315 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLY 331 RPDIR E L + A IG A++ +P LSL S+ L F W F P+L Sbjct: 316 RPDIRAAEHDLKAANADIGAARAAFFPRLSLTSSVGNSSLKPSQIFTTAANTWGFQPELT 375 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF+ G+ ++N+R +++ + +Q+ + +A ++V NAL + ++ L A Sbjct: 376 VPIFNWGQNRANLRISKAERDMKITAYQKAIQSAFRDVSNALVGRDTYRREEVALTQAAA 435 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + +L+ + QG S + +L+ E+ + E + ++ V LY A+G G Sbjct: 436 KAENNWNLARLRQTQGSDSAITMLNYEQTYYQAEYQAIQNRVARYQNLVTLYSALGGG 493 >gi|254250324|ref|ZP_04943643.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] gi|124879458|gb|EAY66814.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] Length = 506 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 113/474 (23%), Positives = 219/474 (46%), Gaps = 34/474 (7%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ + G S N + W Sbjct: 7 ALTAIAVALFATGCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAATAIGWR 66 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP 110 E F D L +L++IAL+ N + + I AA+ RA LFP+ + + R+ Sbjct: 67 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRYPQ 126 Query: 111 NL---------KTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISK 159 + +T + G L + W++DLFG+ + + + +LA L +AYA+ ++++++S+ Sbjct: 127 GVSPTNQAYISRTYNVG-LSASWELDLFGRVQSLKDQALAQYLSTAYAR-QASEISLVSQ 184 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ + + + L + + +L+ L+F G S+L L + + +++ ++ Sbjct: 185 VADQYLTLLSTDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQ 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 QAQARARAQALNALVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVM 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFD 336 E+ L + A IG A++ +P +SL G+ T F WSF P + LPIF+ Sbjct: 302 QAEQTLLAANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFE 361 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 362 GGQNIANLDLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRR 421 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 422 FDLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 475 >gi|51245548|ref|YP_065432.1| outer membrane efflux pump channel protein [precursor] [Desulfotalea psychrophila LSv54] gi|50876585|emb|CAG36425.1| probable outer membrane efflux pump channel protein [precursor] [Desulfotalea psychrophila LSv54] Length = 466 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 112/457 (24%), Positives = 220/457 (48%), Gaps = 23/457 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNK 63 L +L+ C + PEY +P P T + G +DT + W E F SL Sbjct: 10 LAATMLSSCVLIPEYQQPETPTAAT-WKAGEYGIESEVDTNQLAINIPWQEFFLSESLRD 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD-- 121 +V++AL N + A + ++ RADLFP A+ S +F N + + T D Sbjct: 69 VVQLALDNNKDLQTALLNVEKSRATYNIQRADLFPKINATGSGQF-ANYQPDGTPAQDLY 127 Query: 122 ------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +++DLFG+ + + + N L + AQ I+ + +I++ +Y+ E Sbjct: 128 KAGLTMPSYELDLFGRIQSLSKAALNSYLATEEAQKSIS-IALIAESANTYLQLISDIES 186 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++ +H+ L KK+ +L ++ G +KL + +++ +++ + + + + + + Sbjct: 187 LNFSHKTLKAQKKSRDLIMKRYQYGIATKLDIAQVQIAVETSRTKQALYTRLVQQDKNGL 246 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG + + Q + + L I +G+P+ ++ NRPDI+ E ++ + A IG Sbjct: 247 VALLG---IKDFSKIPLQKSLQEVALLQEIPVGLPSQILLNRPDIKQAEYQMKGAGANIG 303 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A++ YP ++L G + ++ +N W+FGP + +P+F+ G+ ++ ++ AE + Sbjct: 304 AARAAFYPRIALTGELGYASNDLGNLFNHGVWNFGPSISIPVFNAGQNRARLKVAEVEQK 363 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++T+ NA +EV + L + + + + + V + + LSM+ Y QG S L Sbjct: 364 IAVTQYEKTIQNAFREVADQLVARDTLGEQLNAQEMLVNASQNAYDLSMMRYTQGIDSFL 423 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD +R+ +++ KRQ + V LY +G G Sbjct: 424 SALDAQRSLFTAQLNKIDIKRQELANKVSLYKVLGGG 460 >gi|330876002|gb|EGH10151.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 396 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 173/346 (50%), Gaps = 9/346 (2%) Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +P G L + ++ DLFG +R IE++ AN+D+ A VD A++ +++ ++ +Y Sbjct: 48 VPVANVGDVG-LTTSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITLVADVVHAYTQI 106 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E + IA + LDL ++++ L+ G + + + + + KS+ +++P E + Sbjct: 107 CAANEELDIARESLDLQQQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQ 166 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LL P + + S N P++ + +G A L++ RPD+R E+ LA Sbjct: 167 AAMFRLSMLLAKPVEQLPAGV--SSCNALPHIAQVMPVGDGATLLKRRPDVRQAERHLAM 224 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S A+IG+A +LYP +S+ SI T + P N W FGP L I G ++ I Sbjct: 225 STAQIGVATGELYPDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARI 282 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +AE+SAQ + VLNAI+E + L L+ A + K++ + Y Sbjct: 283 HQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDALKEAEQSAKEAADQTHRFY 342 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + GR S L L R V ++ A Q+A ++L++A+G G+ Sbjct: 343 QAGRASFLADLQATRTYTDVRAQMAQANTQVAMGQINLFLALGGGW 388 >gi|186475248|ref|YP_001856718.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184191707|gb|ACC69672.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 505 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 117/474 (24%), Positives = 211/474 (44%), Gaps = 35/474 (7%) Query: 8 FSLFIVLLA----GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLK 51 +SL V +A GCT+ P Y +P P+ T S G S N + Sbjct: 4 YSLMAVAVALFATGCTMEPTYHQPAAPVSGTFPSDGVYATQPVPGAGARSANGQPAVEIG 63 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W + F D L +L++IAL+ N + + I A++ RA LFP+ AS S Sbjct: 64 WRDFFVDQRLQRLIEIALKNNRDLRVSVLNIEASRAQYQIARAALFPALDASASQTKQRT 123 Query: 108 ------FIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 F + + L++ W+ID FG+ R + + +LA + A++ +++ + Sbjct: 124 PKNLSVFGNTISNEYSVGLNASWEIDFFGRIRSLKDQALAQYLATAQARKAAEIALVASV 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + + L +++ ++ L++ G S+L L + + ++ +++ Sbjct: 184 ADQYMTVLAYDDLLKVTENTLKSAQESYRITKLQYDTGTGSELDLRQAQTVVEQATANLQ 243 Query: 221 TLEKSFRMNVHNISTLL-GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + R N LL G P + + NL I G+P+DL+ RPDI Sbjct: 244 S-QARLRAQAENALVLLVGEPLPSDMPSGLILDDQ---NLLTDIPAGLPSDLLTRRPDIM 299 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFD 336 E+ L + A IG A++ +P +SL GS T F + WSF P + LPIF+ Sbjct: 300 EAEQNLLAANANIGAARAAFFPKVSLTGSFGTLSPTLGGLFKPGSAAWSFAPTITLPIFE 359 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ +N+ A Q +++ + A +EV + L + + + L+ ++ Sbjct: 360 GGQNIANLDLANVEKNIQIAQYEKAIQTAFREVADGLAARGTYDEQIKALERDTFAEQRR 419 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS + YR G S L +L + + + L A+ + + VDLY A+G G+ Sbjct: 420 LDLSDLRYRNGVDSYLAVLTAQTSLYSAQQLLITARMERLTNLVDLYKALGGGW 473 >gi|241760856|ref|ZP_04758945.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374475|gb|EER63936.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 512 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 121/478 (25%), Positives = 218/478 (45%), Gaps = 44/478 (9%) Query: 9 SLFI---VLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNL------INIDTLKWWESF 56 +LF+ +LLAGCT+ P+Y +P P P ++ + N + D L W + F Sbjct: 23 TLFLSTNILLAGCTMAPKYHRPAASVAPQWPKSAALPAADNTSMKPHPMAAD-LGWQDFF 81 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------------- 99 D L L+ IA+++N + A + I A+ RA L P+ Sbjct: 82 KDARLKALITIAIRENRDLRSAIQAIGEAQARYRVQRASLLPAIGGTGEVMYQQPSGKSG 141 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LN 155 S+A IP S G S ++ID+FG+ R + A + A Q + A+ + Sbjct: 142 LSFAPGVGEDIPRFHYYSMGIGFSSYEIDIFGRIRSLSKEAA--ERALMQEETARGTLIT 199 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +IS++ SYI +E +++A + K+N++L+ G S L++ + E + Sbjct: 200 LISQVANSYIAWLADRETLNLAEESYQAAKRNLDLTQALLDHGEASLLTVNQAETLFQQK 259 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRN 274 ++ +N+ L+G + L F + N+ ++ G+P+DL+ N Sbjct: 260 ADLREQAKRQMAWEENNLVLLIG----QPLPDNLPPPLPFGEQNIIEDLSPGLPSDLLEN 315 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLY 331 RPDIR E L + A IG A++ +P LSL S+ L F W F P+L Sbjct: 316 RPDIRAAEHDLKAANADIGAARAAFFPRLSLTSSVGNSSLKPSQIFTTAANTWGFQPELT 375 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF+ G+ ++N+R +++ + +Q+ + +A ++V NAL + ++ L A Sbjct: 376 VPIFNWGQNRANLRISKAERDMKITAYQKAIQSAFRDVSNALVGRDTYRREEVALTQAAA 435 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + +L+ + QG S + +L+ E+ + E + ++ V LY A+G G Sbjct: 436 KAENNWNLARLRQTQGSDSAITMLNYEQTYYQAEYQAIQNRVARYQNLVTLYSALGGG 493 >gi|187919248|ref|YP_001888279.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187717686|gb|ACD18909.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 533 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 120/499 (24%), Positives = 217/499 (43%), Gaps = 63/499 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI------------------------GNS 41 A L + LLA C++ P Y +P + P F G Sbjct: 14 AASGLLVALLAACSLEPTYKRPDVDA-PAAFKEAPAASATAGASAPSAASGVSAQDNGTW 72 Query: 42 KNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 K D +WW F D LN L + A N + A R+ A+ + ++D FP Sbjct: 73 KQAQPADDAHRGEWWTIFGDPQLNALEEQASAANQDLKAAAARVQQARAVTQAAKSDWFP 132 Query: 99 S---------SYASISHRFIPNL--KTNST---GQLDSDWKIDLFGQ-RRHIESSLANLD 143 AS + +F P+ TN T Q + ++ DLFG+ ++ +S ++ Sbjct: 133 KLDAGFGPTRERASAASQFQPDSVGGTNGTIWRAQTTASYEADLFGRVGSNVNASRSDEQ 192 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 + A +L++ + + +Y R + + + L + ++L +F +G +L Sbjct: 193 QSEALFRSVQLSLQADVAQNYFQLRELDTDQDLYRRTVALREDTLKLVERRFKEGDIGEL 252 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI 263 + + E+ S +D + + + H+++ LLG P +F +F +P+ Sbjct: 253 DVSRARNELASARADAVGVARQRAASEHSLAILLGKPPADF---------SFAEAPLVPV 303 Query: 264 NI----GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNS 316 + G+P+DL+ RPDI E+ + + A++G+AKS +P L + G T + Sbjct: 304 TVRVPPGLPSDLLERRPDISAAERAMQAANARVGLAKSAFFPKLDITGGAGFESATLGDL 363 Query: 317 FPGYNTHWSFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 F + + GP L LP+FD G+ K+N+ +A S E +++ VL A +EVE+ Sbjct: 364 FKWSSRAFILGPFAGTALTLPLFDGGRRKANLAQARSKYDEDVAQYRQQVLVAFREVEDN 423 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L+ + + + AV+ +++ LS Y +G S LD++D ER ++ S Sbjct: 424 LSDLRLLDDQMREQNDAVQASQRAAHLSRTQYTEGAVSYLDVIDGERQVLTSQLQASHLS 483 Query: 433 RQLAKSYVDLYIAIGSGYN 451 A + V+L A+G G+ Sbjct: 484 GTQAVATVNLIRALGGGWG 502 >gi|254000417|ref|YP_003052480.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253987096|gb|ACT51953.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 459 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 104/451 (23%), Positives = 213/451 (47%), Gaps = 22/451 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + + GC++ P+YT+P +P+ P+ + + + D L+W + F D L L++ ALQ N Sbjct: 15 LCVGGCSLAPDYTRPALPV-PSSYPVATEAQ-ASADALQWAQYFPDPELQALIQRALQHN 72 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---------TGQLDSD 123 + A RI A+ +AD P+ ++ + ++ T G +D Sbjct: 73 RDLRVAVLRIEEARAQYGIQKADRLPTVNGTLGYERSRSVLTQGQKFDTDFYRAGVNVTD 132 Query: 124 WKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++D FG+ +++ ++ L S + + +++++L +Y++ ER+++A + L Sbjct: 133 FELDFFGRVKNLSAAALEQFLSTQDARESVQTSLVAELATAYVNLLALNERLTVAQETLK 192 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA- 241 + ++ ++ G + + L E + K+ E+ L + ++ + L+G A Sbjct: 193 SRQASLSRIKRRYEGGLDNAIELKTAEIQAKTAEASASALAREQAQAINALQLLVGDGAP 252 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E L K N+ Q + G+P+ L+ R DIR E +L + A IG A++ +P Sbjct: 253 AEALPL--KALNDVQME---TVAAGLPSQLLEQRADIRAAEHRLLAANANIGAARAAFFP 307 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 + L S L +D+ G + WSF P+L LPIF+ G+ ++++ A Sbjct: 308 RIQLTASAGLVNDDLLRLFGGGSDRVWSFTPQLVLPIFNAGRNQASLDLAVVRKDVAVAE 367 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++T+ A +EV + L + + + E ++ + L+ Y +G + L++LD Sbjct: 368 YEKTIQTAFREVADVLVVSRQIEDEIALQASIAEADRERLRLATRRYERGVANYLELLDA 427 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +R+ E L K+ + ++LY A+G Sbjct: 428 QRSLYDSEQQLVQLKQLGLVNKINLYKALGG 458 >gi|330815396|ref|YP_004359101.1| Putative outer membrane protein OprM precursor [Burkholderia gladioli BSR3] gi|327367789|gb|AEA59145.1| Putative outer membrane protein OprM precursor [Burkholderia gladioli BSR3] Length = 514 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 114/471 (24%), Positives = 207/471 (43%), Gaps = 35/471 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFN 57 ++ + GCT+ P Y +P P+ + S G +S N + W F Sbjct: 25 AVLLFAATGCTMAPHYQRPAAPVSGSFPSDGVYATQPGADGSHSANGQAAADIGWRNFFA 84 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L L++IAL+ N + + I AA+ RA LFP+ + + R + T Sbjct: 85 DPRLQALIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNTQRLPAGVST 144 Query: 115 NSTG--------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + L + W++DLFG+ + + + +LA S A++++IS++ Y+ Sbjct: 145 TGSPLITRTYNVGLSASWELDLFGRIQSLKDQALAQYLSTAQARKAAEISLISQVADQYL 204 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + + + + L + + L+ L+F G S+L L + + ++ ++ + Sbjct: 205 TLQSTDDLLKVTEETLKTAQDSYNLTKLQFDNGTGSELDLRQAQTVVEQALANQQAEARD 264 Query: 226 FRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 V+ + L+G P + L + QS L I G+P+DL+ RPDI E Sbjct: 265 RAQAVNALVLLIGEPLPDDLPAGLPLDSQS------LLTDIPAGLPSDLLTRRPDIMEAE 318 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + L + A IG A++ +P +SL G+ + T F WSF P + LPIF+ G Sbjct: 319 QTLLAANANIGAARAAFFPKISLTAAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGS 378 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +N+ A + + +++ + A +EV + L + + + L E ++ L Sbjct: 379 NIANLDLAHVQKRIEIANYEKAIQTAFREVSDGLAARGTYDQQIAALARNEEAQQRRYDL 438 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + YR G S L +L + + L A+ + VDLY A+G G+ Sbjct: 439 SDLRYRNGVDSYLTVLTAQTDLYTAQTSLISARLARWTNLVDLYRALGGGW 489 >gi|21241103|ref|NP_640685.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|21106402|gb|AAM35221.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 488 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 118/467 (25%), Positives = 221/467 (47%), Gaps = 38/467 (8%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLKWWESFNDTSLNKLVKI 67 + L+GC ++ P Y +P P+ S G++ N N L W + D L ++V + Sbjct: 15 IALSGCVSMAPHYARPDAPVPSVIGSTGSTGNADTGTPNAAALDWRQVVTDARLQQVVAL 74 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKT--NS 116 AL N + A I A+ RA+LFPS A++SH F + ++ Sbjct: 75 ALDNNRDLRVAVLNIEQARAQYRIQRANLFPSVDATVSHTAQRAAAATSFTGAAQVIRSA 134 Query: 117 TGQLD-SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +G++ S W++DLFG+ R + ES LA+ + + +L++++++ ++ Sbjct: 135 SGEVGISSWELDLFGRIRSLKNEALESYLASEQTQRS----TRLSLVAEVANDWLTVAAD 190 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++R+++A Q LD +K + L+ L+ G S L L +++ ++S +D+ + Sbjct: 191 QQRLALAQQTLDSQRKTLRLTELQHDNGIVSGLDLAQIQTSVESARADVANYATQLAQSR 250 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ ++G T + S+ + + + P+ + + ++ RPD+ E L + Sbjct: 251 NALNLVVG---TSVPVALLPASDAIETGVALAPLPAQLESRVLLQRPDVLPAEHTLKAAN 307 Query: 290 AKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +P++SL GS AL+ + F G +T WSF P + +PIF G +K+ + Sbjct: 308 ADIGAARAAFFPTISLTANAGRGSDALS--SLFDGDHT-WSFSPSVSVPIFRAGALKAEL 364 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A ++ + A EV +AL + ++ + Q V+ ++S SLS Y Sbjct: 365 DVATLQKDITIAQYELAIQTAFSEVADALAERTQLEERMHAQQAMVDAAQRSFSLSDARY 424 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L LD +R + L + A + V LY +G G + Sbjct: 425 RNGVDSYLVALDAQRTLYSAQQTLISLRLTEANNRVTLYKVLGGGAD 471 >gi|77920464|ref|YP_358279.1| putative outer membrane protein [Pelobacter carbinolicus DSM 2380] gi|77546547|gb|ABA90109.1| putative outer membrane protein [Pelobacter carbinolicus DSM 2380] Length = 504 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 119/476 (25%), Positives = 223/476 (46%), Gaps = 45/476 (9%) Query: 11 FIV-LLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLINIDTL--KW 52 F+V LL+GC VGP++ +P P + PT++ G S+ L+ + +W Sbjct: 30 FVVGLLSGCVVGPDFKQPPAPSVTAYTAVPFPDTTTSAPTRW--GASQRLVEGRAINPQW 87 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA-DLFPSSYASIS---HRF 108 W+ LN L+ ALQ + T+ + A+EN + +P + A+I+ RF Sbjct: 88 WKDLGSGKLNALIIEALQASPTLASTRATLRQAQENYAAKSGWTRYPQAEANITGQRQRF 147 Query: 109 IPNLKTNSTGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 P + TG + + +DLFG+ RR +E+ A +D Q+ A+L + Sbjct: 148 NPG-SSGLTGDPREFELFNAGIGLRYNLDLFGRNRRILEALAAEIDYQRFQLAGARLALT 206 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + + I F +I IL + ++ +EL+ K G + ++ L+ ++ + Sbjct: 207 SHVASTAISQARFASQIQAMEAILHVQEEQLELTREKVRLGQAAPEEILTLQTRVEQTRA 266 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 DIP L + + H ++ L G P Q +F NL + + + +P++L+R RP Sbjct: 267 DIPLLLSQLQRSEHLLAVLAGKEPGAAGTPSFSLQ--DF--NLPVALPLIVPSELVRARP 322 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DI+ E L + A+ G+A ++LYP L+L+ GS AL+ F + W+ +L P Sbjct: 323 DIQAAEALLQKANAEYGVAIANLYPQLNLSANLGSQALSIGGLFGSGSAVWNLAGQLTQP 382 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F+ G + + R A ++ ++ VL +++ V + L + D + ++ A Sbjct: 383 LFNSG-LSAEKRAALAAFDAALENYRNIVLESLRNVADVLCDLENDSRRLSAFSVANMAS 441 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +K++ + Y G +++L ++ + K E+DL + Q + V +A+G G Sbjct: 442 QKALDIMKNRYEMGAADYIELLIAQQQSQKTEMDLIEVQAQRLLNSVAFLVAMGGG 497 >gi|17544885|ref|NP_518287.1| outer membrane channel lipoprotein [Ralstonia solanacearum GMI1000] gi|17427174|emb|CAD13694.1| probable outer membrane channel lipoprotein [Ralstonia solanacearum GMI1000] Length = 480 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 200/439 (45%), Gaps = 36/439 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSI--------------GNSKNLINIDT-LKWWESFN 57 V L GC VGP++ P +P + ++ G +++L + WW F Sbjct: 15 VALGGCAVGPDFKAP-VPPAASGYTAQPLPAATASAPAPGGEAQHLAEANVPADWWHLFQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---N 111 +L+ LV AL+ + T+ QA R+ A+ + + PS S +++ + P Sbjct: 74 SHALDALVDEALRASPTVAQAAARLREAQAQADAQFGAVLPSVDGSASAVRQQVNPEAFG 133 Query: 112 LKTNSTG-------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 T G L + +DLFG RR +E+S A +D +++ A+L++ ++ + Sbjct: 134 FNTPKPGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDMQRYELEAARLSLAGNVVTA 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + +I+ ++L + + ++ +F G +++ ++ ++ E+ +P L Sbjct: 194 AVRIASLDAQIATTQRLLAAQRDQLVITERRFGAGGVARVDVLSQRTQVAQTEATLPPLA 253 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 254 QQAAQARHRLSVLLGREPGAGLPDLPPLDALRLPD---PLPVSLPSTLAQRRPDIRVAEA 310 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ A +G+A ++L+P ++L+ GS N ++ WS G L P+F G + Sbjct: 311 MWHEASANVGVATANLFPRITLSAELGSQTTGFRNLLGAGSSIWSLGGSLTQPLFHGGTL 370 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ R AE++ +++ VL ++EV +AL +++ D + + A + +++ Sbjct: 371 RARKREAEAAYDAAGAAYRQAVLQGLQEVADALHAVHNDARTLQARALATDQATQALRTE 430 Query: 401 MINYRQGRYSLLDILDIER 419 Y G S L +LD +R Sbjct: 431 QARYAAGGISTLALLDAQR 449 >gi|167583776|ref|ZP_02376164.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 502 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 211/460 (45%), Gaps = 36/460 (7%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQ 71 LL+GC ++ P YT+P P+ P + G + + + W + F D L L++ AL Sbjct: 33 LLSGCLSLAPHYTRPAQPV-PEAYPAGKADEAASATAVPDWRTYFTDARLRTLIEQALAN 91 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISH-RF-IPN---LKTNSTGQL------ 120 N + A R+ A+ RAD +PS A ++ RF P + G+L Sbjct: 92 NRDLRVAVARVEEARAVHGIRRADQWPSINAGAAYARFRTPGGLLAPSPFIGRLYDVQLA 151 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK----LNVISKLIPSYIDARHFKERISI 176 ++ W+ID +G+ R+++ + Y D A+ L++I+++ +Y+ + ERI++ Sbjct: 152 ETQWEIDFWGRVRNLKDAARER---YLASDAARRAVSLSLITQVADAYLAVCAYDERIAL 208 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +D ++++ + + +GA S+L L + E ++ ES L ++ + L Sbjct: 209 TRATIDSRRESLRIFRRRHDEGAISRLDLTQSEILLQQAESLGAQLGQARASAADALMLL 268 Query: 237 LG----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +G PAT Q P G+P+ L+ NRPD+ E +L + A I Sbjct: 269 VGASPDLPATPLTLDDQAVMPALAP--------GLPSALLENRPDVVAAEHQLRAAHANI 320 Query: 293 GIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P ++L +I F WS P L +PIFD G+ ++N+ +++ Sbjct: 321 GAARAAFFPRIALTSAIGSGSSELHKLFTSGTGTWSVIPNLAMPIFDAGRNRANLALSQA 380 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 E +++TV A ++V +AL + + + + + + + L+ + Y G Sbjct: 381 QRDEAVAQYEKTVQGAFRDVSDALAARDWLAEQLRVERATLASQTERARLAKLRYDSGAV 440 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R E L +R L S V LY A+G Sbjct: 441 RFLEVLDAQRDLLNAEQQLVQTRRALLSSRVALYGALGGA 480 >gi|238894498|ref|YP_002919232.1| putative outer membrane efflux protein [Klebsiella pneumoniae NTUH-K2044] gi|238546814|dbj|BAH63165.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 459 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 228/463 (49%), Gaps = 33/463 (7%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 ++R + ++ L GC + + +P + + P + +G + + + WW +F+D+ Sbjct: 1 MIRPVALAIVLALVGCQSADVQRAQPTLTI-PAAWRADVGPASPVEGV----WWRNFHDS 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLK 113 +LN+ V AL+ N +L A ER+N + + + LFPS AS++ L Sbjct: 56 TLNQYVDQALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLTGTRARTQSAATGLP 115 Query: 114 TNST---GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +ST G L + + +D++G R ++ A+L++ A A L+V S + Y+ Sbjct: 116 IHSTLYKGGLTASYDVDIWGANRSAANAAGASLEAQKAAAAAANLSVASSVAVGYVTLLS 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + Q L + L+ +F G TS+L L++ ++E++S + IP L+ Sbjct: 176 LDEQLRVTQQTLTSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQ 235 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG A + + Q P L +P + P+ L+ RPDI E++L Sbjct: 236 ENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIAQAERQLVA 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A + +++ L PS++L + +L D + P + WS G + P+ ++ + + Sbjct: 288 ADATLASSQAQLLPSINLTATGSL-QDRTLPDLLDNPLRLWSLGGSILAPLLNRQALNAQ 346 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + + + ++++TV +A KEV ++L +I+ + +T+LQ + ++++ ++ Sbjct: 347 VDVSMAQRNQALYSYEKTVRSAFKEVNDSLDAISRYGEQLTELQEQETVAQETLRIAQNR 406 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 YR G S LD+LD +R ++ + K L + + LY A+ Sbjct: 407 YRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIALYRAL 449 >gi|237747652|ref|ZP_04578132.1| drug efflux lipoprotein [Oxalobacter formigenes OXCC13] gi|229379014|gb|EEO29105.1| drug efflux lipoprotein [Oxalobacter formigenes OXCC13] Length = 483 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 127/468 (27%), Positives = 224/468 (47%), Gaps = 34/468 (7%) Query: 7 IFSLFIVLLAG-----CTVGPEYTKPHMPLLPTQFSIGNSKNL---INIDTLKWWESFND 58 I L +VLLA C++ P Y +P P+ +QF GN+ + + + W E F++ Sbjct: 2 IKKLTLVLLAAGVLSSCSMAPNYVRPDAPI-ESQFP-GNADDASAKTPVTQIGWNEFFHE 59 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNL--- 112 L L+ A++ N + A RI A+ AD P + A R + Sbjct: 60 PRLKALIAAAIENNRDLRVAALRIEEARALYGIQWADRLPNFEAQGAGTRQRTVGTTGGM 119 Query: 113 --KTNSTGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N T L + +++D FG+ + + +++LA + A ++++S++ +Y+ R Sbjct: 120 VTQGNYTVGLGLAAFELDFFGRVKSLSDAALAEYLATEEAQRAAYISLVSEVAKTYLTER 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +I +A + + YK++ EL ++ GA+S L L + E ++S + TL++ Sbjct: 180 AQARQIELAKESYESYKRSYELMQKRYEVGASSALELRQYETLMQSALVSLSTLQRQRAQ 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + L+G + L S + ++ I G+P+DLI NRPDIR E+ L + Sbjct: 240 TENALVVLIGGKQIKDLPAAHDLSED---DIMQDIPAGLPSDLINNRPDIRQYEQLLKSA 296 Query: 289 VAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P ++L G + + T F + W+F P+L LPIFD G+ SN+ Sbjct: 297 NANIGAARAAFFPRITLTGFAGTASPTLSGLFDAGSGAWTFMPQLTLPIFDAGRNISNLD 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAV-ELHKKSMSLSM 401 AE+ +++TV A +EV +AL + +NE K Q AV + + + LS Sbjct: 357 LAEARKNIAVAQYEKTVQVAFREVADALMARDWLNEQ----VKAQAAVLKSETERLKLSE 412 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y G S L++ D +R + L A+ + V+LY ++G G Sbjct: 413 ARYNNGIASSLEVFDSQRQQFAAQQSLVDARLLRLINTVELYRSLGGG 460 >gi|307727180|ref|YP_003910393.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307587705|gb|ADN61102.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 477 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 115/472 (24%), Positives = 222/472 (47%), Gaps = 36/472 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMP-----LLPTQFSIGNSKNLINIDTLKWWESFND 58 +R + S + LA C V P T +P L P +S+ ++ ++D WW+ F D Sbjct: 6 IRLLASAAWLTLAACAVQPA-THADLPQTVSALAPDAWSVDAPQD--SVDANAWWDQFGD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP---N 111 +++LV+ L NL + A ER+ A++ I RA L P + AS + + P Sbjct: 63 PVMHRLVESVLTGNLNVQAAVERVRQAQDLITQDRAALLPELNAGADASYARQNTPPPLG 122 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + W D+FG +R + ++ A L A ++ +L + + +YID R Sbjct: 123 YVRQAGAGFTASWTPDVFGGERLAVLAAQAQLSGRQAALNEVRLALAANTAAAYIDLRWA 182 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++ I + + ++L+ + G +S+L + + + +++ +++ IP ++ + + Sbjct: 183 QAQLKILRDNEQIRARALKLTQQRLHYGLSSQLDVARAQNQLQDLQAQIPRVQTLVQHQL 242 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 I+ G + + P +P + P++ + RPD+R L Sbjct: 243 SLIAVYSGQTPESVDGLLLADPRDMPVPAQRVPETL--PSEALLRRPDVRTAYAALEQRA 300 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGK 339 A++G++K++ YP LN G +A ++ DN F + S PIF+ G+ Sbjct: 301 AEVGVSKAERYPRFRLNLADGILASSYLGLPTLTDNLFSAALSATS-------PIFNAGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I +NI +ES +E + ++T+L A+KE+E+ + + V +L A++ ++ L Sbjct: 354 ISANIDASESRMRESQLGLRQTMLVALKEIEDNRSELVNGAAQVQRLGGALDASDHALRL 413 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S Y+ G S LD+L + A + L+ KR+ A + V LY A+G G++ Sbjct: 414 SSELYKGGASSFLDVLAAQEAYLRDAQSLNQTKREHALAAVALYRALGGGWD 465 >gi|15595624|ref|NP_249118.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa PAO1] gi|107099413|ref|ZP_01363331.1| hypothetical protein PaerPA_01000425 [Pseudomonas aeruginosa PACS2] gi|116054158|ref|YP_788601.1| major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|218889169|ref|YP_002438033.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa LESB58] gi|254243525|ref|ZP_04936847.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa 2192] gi|296386926|ref|ZP_06876425.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa PAb1] gi|313111949|ref|ZP_07797738.1| major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa 39016] gi|12644685|sp|Q51487|OPRM_PSEAE RecName: Full=Outer membrane protein oprM; Flags: Precursor gi|9946283|gb|AAG03816.1|AE004479_11 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa PAO1] gi|3184190|dbj|BAA28694.1| OprM [Pseudomonas aeruginosa] gi|115589379|gb|ABJ15394.1| major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|126196903|gb|EAZ60966.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa 2192] gi|218769392|emb|CAW25152.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa LESB58] gi|310884240|gb|EFQ42834.1| major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa 39016] Length = 485 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 212/478 (44%), Gaps = 43/478 (8%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFN 57 R+ SL + V+L+GC++ P+Y +P P+ P + G + + + W E F Sbjct: 3 RSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFR 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L +L+ +AL+ N + A + A + RADLFP + R +L T Sbjct: 63 DPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLST 122 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSY 164 + + S W++DLFG+ R + A Q A+ +++ + +Y Sbjct: 123 TGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + ++ + L Y+K+ +L+ + G S L L + + ++E TL + Sbjct: 183 LTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQ 239 Query: 225 SFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 R+ + + L+ G PA Q L + G+P+DL++ RPDI Sbjct: 240 YTRLVAQDQNALVLLLGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDIL 293 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +PS+SL G+++ F + W F P + LPIF Sbjct: 294 EAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFT 353 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++++ A+ +++ + A +EV + L + +LQ +L K S Sbjct: 354 AGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKAS 410 Query: 397 ---MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G + L +LD +R+ + L + S V+LY A+G G+N Sbjct: 411 DEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWN 468 >gi|116695216|ref|YP_840792.1| outer membrane efflux protein [Ralstonia eutropha H16] gi|113529715|emb|CAJ96062.1| outer membrane efflux protein [Ralstonia eutropha H16] Length = 487 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 123/458 (26%), Positives = 211/458 (46%), Gaps = 32/458 (6%) Query: 19 TVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 TVGP+Y P + P Q + + + WW +++ L++LV+ AL Sbjct: 20 TVGPDYRVPDHAAVRAAAANGPLQGAKAPGVAIAPVPD-DWWRLYDNARLDRLVEQALAA 78 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFI-----PNLKTNSTG 118 N I A+ + A + V ++ P AS S F+ P G Sbjct: 79 NTDIRAASANLRRAVALLHEVESENLPQGGASASVSRAQLSGESFLQTTKPPVFNLGDFG 138 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + ID FG+ R E++LA +++ A +D+ ++ V ++ + +Y+ ++ A Sbjct: 139 -FGVSYLIDFFGKLARADEAALAGAEASAATLDMVRVTVAAQTVRAYVQGCAATHELAAA 197 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L + ++ ++ + G + + A +++ S +PTLE + H ++ LL Sbjct: 198 TQQLAVQQRTLDATGRLVDAGRGEPADVARERARTEALHSTLPTLEAARSAARHRLALLL 257 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + + +P L +P+ +G A L+R RPDIR E++LA + A+IG+A + Sbjct: 258 GKPPAALPE--AEVDCHAEPTLRVPLPVGDGAALLRRRPDIRQAERELAAATARIGVATA 315 Query: 298 DLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 DLYPS+S+ S LT H S P WS GP L + G ++ I R E++A Sbjct: 316 DLYPSISIGASAGLTGVLSHLGSGP--TARWSVGPLLSWSLPTNG-VRHRIHRHEAAADA 372 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + VL A++E E AL++ + + L A E ++ L + GR L Sbjct: 373 ALARFDGAVLRALQETETALSAYTRELERHDALHAAREQAAEAARLQRRLQQAGRIPYLA 432 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD ER A E L+ ++ +A VDL++A+G G+ Sbjct: 433 HLDAERTLADAEAALAASEGHVAARQVDLFLALGGGWQ 470 >gi|313497078|gb|ADR58444.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida BIRD-1] Length = 504 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 120/462 (25%), Positives = 212/462 (45%), Gaps = 26/462 (5%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +++LAGCT VGP++ KP +P L P G S + +WW F D +L+ L Sbjct: 10 LLMVLAGCTQVGPDFEKPQVPWLDGWSTPMLEQAGRSAAAPGLR--QWWAVFADPTLDAL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTN- 115 + A N + A RI A+ + V+ +P S Y P+ + + Sbjct: 68 IAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSV 127 Query: 116 ---STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S+ D W+ID +G+ R IES+ A ++ A A L + +++ +Y R + Sbjct: 128 FWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRTAE 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R++IA + +++E++ F G +L + + + + IP E + Sbjct: 188 ARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNALRN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + +LLG P PN + + +PA L++ RPDIR E+ +A A Sbjct: 248 VLCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQD--VPASLLQRRPDIRAAEQAVAAQSAL 305 Query: 292 IGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +G+A++DLYP LSL GSI T N P + GP L FD G+ K+ +R ++ Sbjct: 306 VGVAEADLYPQLSLLGSIGWTFLSANHLPD-TFDLAAGPSLIWNPFDYGRRKNTVRVEDA 364 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 Q+ +Q+ V A +E ++A + + + T A + ++S++L+ YR+G Sbjct: 365 RLQQLIELYQQGVREAAREADDAASGLVRSLQSATIRDQASQAAQRSLNLASSQYREGFA 424 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ++ + + +++ S V LY A+G G++ Sbjct: 425 DFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466 >gi|300694642|ref|YP_003750615.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum PSI07] gi|299076679|emb|CBJ36018.1| Putative outer membrane drug efflux lipoprotein [Ralstonia solanacearum PSI07] Length = 483 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 216/460 (46%), Gaps = 32/460 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINI--DTLK--WWESFNDTSLNKLVKIALQQN 72 GC++ P Y +P M +P + DT K WW+ F+D LN+L++ AL++N Sbjct: 21 GCSLAPPYERPAM-AVPAHWQTEAPWRAAQPADDTPKGPWWQRFDDPQLNRLMEQALREN 79 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH--------RFIPNLKTNSTGQLDSD- 123 ++ A + A+ RA L P AS S R + + T + + +D Sbjct: 80 QSLKVAVSNLEQAQALTRVARAGLLPQVTASTSDTRLRTSADRPLSSYSTPTVSTVQNDF 139 Query: 124 -------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 ++ DLFG+ R +I ++ A+ A A ++ +L + +++ ++ R I Sbjct: 140 VVRADVSYEADLFGRVRSNIANAAASEAQAAANLENFRLLLTAQVATTWYSLRETDAEID 199 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + Q L L +K + + G S L L + +A + S + L+K H ++T Sbjct: 200 VVQQGLALQRKALAFVTSRHQDGVASGLDLAQQQALVDSTATQAELLQKQRTQYEHALAT 259 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F ++ QP + I + +P+D+I RPD+ E+ A + A +G+A Sbjct: 260 LVGTPAPAF--HLSPAPLAGQPPV---IPVALPSDVIERRPDVAAAERGAAAANASVGVA 314 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+ L G + F + WSFG ++ +FD G+ ++ + A + Q Sbjct: 315 RAAFFPSIMLGGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRARVDFANAGYQ 374 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++TVL A++EVE+ L+ + + + + +VE +K ++ Y G + L Sbjct: 375 GAIANYRQTVLGALQEVEDGLSGLQALDRAAAQARASVESARKVYDIASARYEGGLATSL 434 Query: 413 DILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 D++ +++ + + I +QL S V L A+G +N Sbjct: 435 DVITAQQSLLNNQRTAVQILGQQLTTS-VFLVKAVGGDWN 473 >gi|311746249|ref|ZP_07720034.1| multidrug resistance protein, FusA/NodT family [Algoriphagus sp. PR1] gi|126576480|gb|EAZ80758.1| multidrug resistance protein, FusA/NodT family [Algoriphagus sp. PR1] Length = 490 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 122/497 (24%), Positives = 237/497 (47%), Gaps = 67/497 (13%) Query: 5 RAIFSLFIVLLAG--CTVGPEYTKPHMPLLPTQFS----------IGNSKNLINIDTLKW 52 + + +LF +L+ C VG YT+P L P +F +G+ +I ++ W Sbjct: 5 KRLITLFFLLIVAVSCKVGENYTRPETNL-PEEFYGSEKLQDSVFVGDE----HIASINW 59 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------- 99 E F D++LN L+ AL N + + ++I A E++L +A+ PS Sbjct: 60 AEFFQDSTLNSLIDSALAGNFDLQKTAKQIEIANESLLQSKANFLPSLNSNPARFNREYY 119 Query: 100 -----SYASISHR-----FIPNLKTNSTGQL------DSDWKIDLFGQRR-HIESSLANL 142 +Y S R +P KT T +L + W+ID++G+ R E++ A Sbjct: 120 SENYNNYGSNRARRNHPDGVP--KTLYTERLAYAVTLQASWEIDIWGKLRWQKEAAQAKY 177 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + ++S++ +Y + K ++++A + DL K +++ L++ G + Sbjct: 178 MQTQEFKKAVQTALVSEVASTYFNILMLKSQLTVAQRNYDLSKNTLKIVELQYDAGENTS 237 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLY 260 L++ + ++++ ++ IP LEK++ + + ++ L+G A EF + Q L Sbjct: 238 LAIQQTKSQMLRAKALIPQLEKAYVIQENRLNNLIGRTPGALEFKGVLD------QLALD 291 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--- 317 G+P +LI+NRPD+ E +L + A++GIA++ YPSL++N L NS Sbjct: 292 HTYTTGVPLELIQNRPDVAASEYELISTNARVGIAQAMKYPSLTINAGAGL---NSMALG 348 Query: 318 ----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 P + L+ PIF K+K+N R A + + +++ + A+ EV +AL Sbjct: 349 TVIDPISSGFALINGALFQPIFQNRKLKTNHRIAIKQREIAELDFRDKINTAVSEVSSAL 408 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 +I + ++ Q + K M+ + + + G + L+I++ + + ++D+ K Sbjct: 409 VNIEKLQEEYEIAQERMRTTTKGMADAFLLFESGFANYLEIINAQEDALQNQLDVVQLKM 468 Query: 434 QLAKSYVDLYIAIGSGY 450 QLA + V+LY ++G G+ Sbjct: 469 QLALAKVELYRSLGGGW 485 >gi|194367782|ref|YP_002030392.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194350586|gb|ACF53709.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 486 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 221/480 (46%), Gaps = 36/480 (7%) Query: 1 MNILRAIFSLFIVL--LAGC-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL-- 50 MN L + L LA C TVGP+Y P P F + + L Sbjct: 1 MNAALPRLGLIVALASLAACRTVGPDYALPEGSAFKRPQANAAFIDTQNPQIAANQALPD 60 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RAD 95 +WW +ND L++L+ AL+ N+ + A R A E L RA Sbjct: 61 RWWSLYNDPVLDRLITQALRDNVELKAADAHLRRAAAVYEQALDAGGFEYEAEAGASRAQ 120 Query: 96 LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 L S+ + NL + G+ ++ DLFG+ +R E++ A+ S A D+A++ Sbjct: 121 LSAESFLQEHELPVINL---ADGKFAVSYQFDLFGKLKRGAEAARADDQSVAAARDLAQV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V++++ SY++ H + +A L L +++ ++ G + L + A++ Sbjct: 178 SVVAQVADSYLEICHANHELHVAEHSLQLQQRSRSVTERLIAAGRGTPPELARANAQVAL 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +E+ +P L+ ++++ LLG + + ++ P+L P+ +G L++ Sbjct: 238 LEAALPPLQAQRSAAAYSLAALLGQTPGQLPAGVIDCAHA--PSLAQPLPVGDGRALLQR 295 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E+KLA + A+IG+A ++LYP + L G+ L D P WS GP + Sbjct: 296 RPDVRQAERKLASATARIGVATAELYPDIRLGASLGAAGLLEDFGTP-MTQQWSIGPLIS 354 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + G + I AE+ A + TVL A++E + AL +D + + L+ A E Sbjct: 355 WTLPSSG-THARIHAAEAGADAALAEFDHTVLQALRETQTALDRYAQDLRRLQSLRIAQE 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y+ GR L LD +R+ A + L+ A+ Q+++ + L++ +G G+ Sbjct: 414 QAALAAEQNRRLYQGGRTPYLSSLDADRSLATSDATLAAAEAQVSRDQIHLFLVLGGGWQ 473 >gi|256421812|ref|YP_003122465.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256036720|gb|ACU60264.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 474 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 231/476 (48%), Gaps = 39/476 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSL 61 L + +L + L C VG Y +P + L P Q+ ++ + +I TL+W + F DT+L Sbjct: 8 LSIVSTLIVAGLVACRVGRNYQRPSLAL-PAQYNDTVSAASADSSIATLEWKQFFTDTTL 66 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQL 120 L+ AL N + A +RI A+ + + P+ + + + IP+ + + L Sbjct: 67 QGLIGRALSGNYDLQLAIKRIETAQAYLKQAKLGWLPTVNLQAAASTSIPSKNSLNGTSL 126 Query: 121 DS----------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 ++ W+ID++G+ +R E++LA+ + + + +++ + S Sbjct: 127 NTFLGTEHIEDYSLNAGLSWEIDVWGKIKRRKEAALASYLGTFEGMHAVQTGLVADIANS 186 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + ++ IA + L +++ L+ T G T++L++ + EA+ ++ IP LE Sbjct: 187 YYNLLMLDAQLEIARSNVLLSDTIVQMIRLQKTAGETTELAVQQAEAQRQTAALLIPQLE 246 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + + + L G E + + L + G+PA L+ NRPD++ QE Sbjct: 247 QAKAIEQNTLRILAG----ELPGTVAYSTTLITTPLRELMPAGVPAALLSNRPDVKEQEM 302 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------FG---PKLYLPI 334 L + A++G+A++ +YP+L++ S + N+F + W FG L P+ Sbjct: 303 ALVAANAEVGVAQASMYPALNITASGGV---NAFKA--SDWFTLPASLFGMVAGSLTQPV 357 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F +G++K+N+ A+ +E I +++ LNAI EV N+L +++ K+ + V Sbjct: 358 FQRGQLKTNLEVAKIQREEAVIRFRQVALNAIGEVSNSLVRLDKLKEQQVIASNQVTTLA 417 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S + + +R G + LD++ + + + + + RQ + V+LY ++G G+ Sbjct: 418 LATSQARMLFRSGMANYLDVITAQGRSLQASLTQADITRQQLSASVELYRSLGGGW 473 >gi|209885187|ref|YP_002289044.1| RND efflux system, outer membrane lipoprotein, NodT [Oligotropha carboxidovorans OM5] gi|209873383|gb|ACI93179.1| RND efflux system, outer membrane lipoprotein, NodT [Oligotropha carboxidovorans OM5] Length = 512 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 110/426 (25%), Positives = 202/426 (47%), Gaps = 30/426 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SY 101 TL WW F L +L++ A + NL I AT R+ A + A L P+ + Sbjct: 78 TLDWWRGFRSAELTQLMEEAQRVNLDITAATARLLQADAMTRTAGAALLPTLDANASATR 137 Query: 102 ASISHRFIPNLKTNSTG-------QLDSDWKIDLFGQRRHIESSLANLDSAYAQV---DI 151 + S ++ N + G L + ++IDL+G+ R ++ LA +SA A D Sbjct: 138 SKSSSGYLNNGTVAARGTINTYSTSLSASYEIDLWGKNR--DALLAAEESANASRYDRDT 195 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 L ++ + +Y ++RI+ A + + K+ + + G S L L + E+ Sbjct: 196 VALTAMASVANAYFQVLAAQDRIATAERNIASAKRIYDAIKARVDAGTGSDLDLAQQESL 255 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + +P L ++ N++ ++TL+ P E +H P G+P++L Sbjct: 256 LANQRAAVPPLRQTLTQNLNILATLVARP-PERVHIRGGSLGRVSAPRVTP---GLPSEL 311 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSF 326 + RPDIR QE +LA + A +G A++ +PS+ L G S AL+ F + ++ Sbjct: 312 LIQRPDIRRQEAQLASATANVGSARAQFFPSIQLTGQGGYQSAALSA--LFMPQSAFFNL 369 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L PIFD G+I++N ++ E T+++TV++A +V AL +I + + + Sbjct: 370 AAGLTQPIFDAGRIQANFDLTKAQQDELLQTYRKTVISAFSDVNTALDAIRQTAQRLRLQ 429 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + V +++ LS R G ++ +L+ ++ + E L A+ +SYV L+ A+ Sbjct: 430 RVVVASSRRAFKLSEDQLRAGTADIITVLNTQQTLFQAEDTLLQAQLAWLQSYVSLFQAL 489 Query: 447 GSGYNP 452 G G+ P Sbjct: 490 GGGWEP 495 >gi|218891357|ref|YP_002440224.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas aeruginosa LESB58] gi|222110363|ref|YP_002552627.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|218771583|emb|CAW27355.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas aeruginosa LESB58] gi|221729807|gb|ACM32627.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 501 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/464 (24%), Positives = 224/464 (48%), Gaps = 34/464 (7%) Query: 17 GCTVGPEYTKPHMPL---LPT-----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC++ P+Y +P P+ P+ + + + I + + W + F D L +L+ I+ Sbjct: 25 GCSMAPKYDRPAAPIDTAYPSGAAYVELAAATPDDAITAE-IGWRDFFRDPLLQQLIGIS 83 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD---- 121 L+ N + +A + AA+ RA++ P+ S S R +L T TGQ D Sbjct: 84 LENNRDMHKAALNVEAAQALYRIQRAEMLPNLGVSARGASERVPADLST--TGQSDVLRR 141 Query: 122 -------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA+ A + IA +++++S++ +Y+ R +E Sbjct: 142 YDVAGVTAAWELDLWGRIRSLNDRALASY-LALDETRIATQMSLVSEVASAYLTLRADQE 200 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K++ +L+ G +++L L + E +++ E++ + + + Sbjct: 201 LLRLTSDTLATQKRSYDLTTQLVEAGNSTQLDLRRAEIALRTAEANRAAYTRQAAKDRNA 260 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ P+ +P ++ G+P++L+ RPDIR E+ L + A Sbjct: 261 LVLLLGQPLTPELSRQLDEAVAL-PDDIVPTDLPSGLPSELLARRPDIRAAEQMLIGANA 319 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P++SL GS D F + WSF P++ LPIF G +++N+ A Sbjct: 320 NIGAARAAFFPTISLTGSAGTASASLDGLFDSGSRAWSFLPQITLPIFRGGALRANLDVA 379 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + + +++++ A EV + L + + Q V +K+ L+ +++G Sbjct: 380 QVQKRIEIANYEKSIQAAFAEVADGLAGKRTLDEQIRSEQLLVAASQKAYQLAEQRFQEG 439 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + L + + + LY A+G G+ Sbjct: 440 VDDNLTLLDAQRTQYGAQQTLVRTRLTRLNNLIHLYKALGGGWT 483 >gi|224024666|ref|ZP_03643032.1| hypothetical protein BACCOPRO_01394 [Bacteroides coprophilus DSM 18228] gi|224017888|gb|EEF75900.1| hypothetical protein BACCOPRO_01394 [Bacteroides coprophilus DSM 18228] Length = 460 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 110/452 (24%), Positives = 218/452 (48%), Gaps = 24/452 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 LL C +G YT+P + L T S S + ++ W + + DT+L L++ AL N Sbjct: 19 LLGSCQLGKHYTRPQLQLPETLDS--TSVDSTSLGDYPWEQLYTDTTLQALIRKALTYNK 76 Query: 74 TILQATERIN--AAKENILSVRADLFPSSYASI-----SHRFIPNLKTNSTG---QLDSD 123 +L A R+ AA + I A LFP + + N TNS ++ Sbjct: 77 DMLIAASRVKELAAMKRI--DYAKLFPEVNLKVYGERERENYGGNHPTNSDEFDLKVGVS 134 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++DL+G R + SLA + ++ ++S++ SY + +SI + ++ Sbjct: 135 WELDLWGNLRWARDKSLAQFMGSIENQRAVRMTLVSQVTQSYFELVALDNELSIVRKTVE 194 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 ++ + L+ +++ G TS+ + + + E+ + +P LE+ + + ++ L G YP Sbjct: 195 ARREGLHLARIRYEGGLTSETAFRQAQVELARTATLVPDLERKISLKENELAFLTGDYP- 253 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 ++ + + I + +G+P+ L+ RPD+R E+ L ++ A +GIA ++L+P Sbjct: 254 ----RHINRAVLPEEVMFPISLPVGLPSSLLERRPDVRQAEQALIEANAAVGIAYTNLFP 309 Query: 302 SLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 ++L S + H G L P+F GK ++ ++ +++ ++ ++ Sbjct: 310 RITLTASYGAESKLLSDLLKSPHHLIVG-NLLQPLFAMGKNRAMLKAKKAAYEQAAYAYE 368 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + VL+A K+ NA+ N+ K+I + K ++ L+ + Y +G + +D+LD +R Sbjct: 369 KAVLSAFKDAYNAIVEFNKIKEIYETRLRLEQSSKSALELAQLQYMEGVIAYMDLLDAQR 428 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + ++ LS A R + V+LY A+G G+ Sbjct: 429 GYLEAQISLSNAIRDKQITLVNLYKALGGGWQ 460 >gi|206578022|ref|YP_002238807.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Klebsiella pneumoniae 342] gi|206567080|gb|ACI08856.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Klebsiella pneumoniae 342] Length = 456 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 109/415 (26%), Positives = 206/415 (49%), Gaps = 25/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 WW +F+D++LN+ V AL+ N +L A ER+N + + + LFPS AS++ Sbjct: 48 WWRNFHDSTLNQYVDRALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLTGTRARA 107 Query: 106 HRFIPNLKTNST---GQLDSDWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKLI 161 L +ST G L + + +D++G R S+ A A A L+V S + Sbjct: 108 QSAATGLPIHSTLYKGGLTASYDVDIWGANRSAASAAGASLEAQKAAAAAANLSVASSVA 167 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ E++ + Q L + L+ +F G TS+L L++ ++E++S + IP Sbjct: 168 VGYVTLLSLDEQLRVTQQTLKSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPP 227 Query: 222 LEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ + +S LLG A + + Q P L +P + P+ L+ RPDI Sbjct: 228 LQHQIAQQENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIV 279 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 +++L + A + +++ L PS++L + +L D + P + WS G + P+ Sbjct: 280 QAQRQLVAADATLASSQAQLLPSINLTATGSL-QDRTLPDLLDNPLRLWSVGGSILAPLL 338 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ + + + + + + ++++TV A KEV ++L +I+ + +T+LQ V + ++ Sbjct: 339 NRQALNAQVDVSMAQRNQALYSYEKTVRGAFKEVNDSLDAISRYDEQLTELQGQVAVAEE 398 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++ YR G S LD+LD +R ++ + K L + +DLY A+G G+ Sbjct: 399 TLRIAQNRYRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIDLYRALGGGW 453 >gi|77164780|ref|YP_343305.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosococcus oceani ATCC 19707] gi|254434342|ref|ZP_05047850.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Nitrosococcus oceani AFC27] gi|76883094|gb|ABA57775.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosococcus oceani ATCC 19707] gi|207090675|gb|EDZ67946.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Nitrosococcus oceani AFC27] Length = 590 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 115/473 (24%), Positives = 221/473 (46%), Gaps = 34/473 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYT-----KPHMPLLPTQ------FSIGN-SKNLINIDTLKWW 53 SL + L+ C GP +P +LP F+ N S+ + D WW Sbjct: 27 GCVSLLTLALSACMGGPAIDLTPDYQPEQFILPDSWRGSGPFAKANPSEGELRPD---WW 83 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP 110 + ++D LN+L K A++ N + A ER A+ ++ VR+ L P + + +++ Sbjct: 84 KLYDDPVLNELEKQAMEANPDLHAAAERFIQARAIMMKVRSRLIPQLGVGFGASNNKQSE 143 Query: 111 NLKTNSTGQLDSD----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 G+ D + W+ D + + R + + A+ +A+L++ ++ Sbjct: 144 ERLFRGLGEPDRETTLEFGGLASWEPDFWSRIRNRTRMKIYRAEQRAAEYILARLSLQAE 203 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y R + +I Q ++ YK + + +F + K+ + + + + S E+ + Sbjct: 204 VATNYYTLRSLDGQAAILSQSVNYYKDLLGVVEDRFNGAISPKIDVTRTQFLLFSTEARL 263 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ ++ H ++ L+ A+ F + + + P + + IP+ L+ RPDI Sbjct: 264 LNIQAQRQVIEHALAVLVNRSASSF----KIEPLDEFPMAKFQLPVEIPSTLLERRPDIA 319 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKG 338 E+K+A + IGIA++ YP +S F + WS+G ++ LPIF G Sbjct: 320 AMERKMAQANRTIGIARAAFYPHISFGAGSGFEGGTGLFDLAKSFWSYGLEVRLPIFQGG 379 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ +++A S +E ++ TVLNA +EVEN L+ N V KL +VE ++ + Sbjct: 380 HRRARLQQAWSVYRETVDDYRSTVLNAFREVENGLSRTNLISAQVEKLITSVEAALETQN 439 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++ Y+ G + LD+L + T +++ K +L KS V+L A+G G+N Sbjct: 440 LTVNLYQGGLATSLDLLFAQINTLDARIEVVRGKAELMKSSVELVRALGGGWN 492 >gi|170735054|ref|YP_001774168.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169821092|gb|ACA95673.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 464 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 115/465 (24%), Positives = 209/465 (44%), Gaps = 20/465 (4%) Query: 1 MNILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 M +R + +L +L CT P T PL T + + DT WW F D Sbjct: 1 MKFVRLVAALSAAAILTACTSAPVATVTPPPLAATYANADLAAGGPAADTGAWWHGFRDP 60 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIP 110 L++LV AL NL + A RI+AA+ + + FPS S S F Sbjct: 61 ILDRLVDTALANNLDLQAAVARIDAARAVRIGAASQWFPSVDLNAGASRQRQSASQAFPT 120 Query: 111 NLKTNSTG-QLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + T L++ W+ID+FG+ R+ + ++ A++ SA ++ I + + +Y+ Sbjct: 121 DTPTTGNAFDLNASLAWEIDIFGRIRQGVSAADADIASAQNDAAAVRIATIDETVRTYVT 180 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++R+++ + E + F G + + A+ ++ +++P L+ Sbjct: 181 VRGLEQRLALVEANALSQRGTEESTRRLFDAGVVPIADVDRAAAQTETTLAELPALQLQR 240 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + +H +S + + + + P IG PADL+R RPD+R E ++ Sbjct: 241 QAAIHRLSIITASTPQDIYARLDPPAPEPVWTAAAP-GIGTPADLLRRRPDVRAAEARVV 299 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 + A+IG+A++DL P L L G I D F G + W G P+FD G+ +S Sbjct: 300 AAYARIGVAEADLKPHLQLIGVIGAAIDG-FSGASLARSLAWMAGAGASAPLFDGGRRRS 358 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + + A + ++ VL A+ +VE ++ + + +L+ AV + + + Sbjct: 359 VVALRRAQADQALAAYRTAVLTAVGDVETSVAATARNHGRTERLERAVSNARGAYTQINR 418 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++R G + +D L+++RA E L+ A+ + S V L A+G Sbjct: 419 SWRSGESAFIDTLEVQRALLAAEDSLAQARTEETLSRVRLMSALG 463 >gi|66045842|ref|YP_235683.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|10764639|gb|AAG22805.1|AF297010_1 putative outer membrane efflux protein OprM [Pseudomonas syringae pv. syringae] gi|63256549|gb|AAY37645.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 478 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 113/463 (24%), Positives = 223/463 (48%), Gaps = 27/463 (5%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LF L L+GC++ P+Y +P P+ P + + + + W + F D +L +L+ Sbjct: 15 LFTALSLSGCSLIPDYQRPAAPVAAHYPQSSAYAPALSGPLAADMGWRDLFRDPTLQQLI 74 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS- 122 + AL N + A + A + RADLFP S+ S + + P T + G + S Sbjct: 75 ESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGGPVTSG 134 Query: 123 ---------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +++DLFG+ R + ++SL L S A+ L++++ + +Y+ R + Sbjct: 135 TYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEARRSTL-LSLVASVATAYLTWRADQ 193 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ +++ Sbjct: 194 ELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQAAQDLN 253 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N++ L+G TE S + G+P+DL++ RPDI E +L + A Sbjct: 254 NLTLLVG---TEVAD--SAPSRPLSSEWLAEVPAGLPSDLLQRRPDILEAEYQLQSANAS 308 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS++L G+ + F G + W F P++ +PIF+ G +++++ ++ Sbjct: 309 IGAARAAFFPSITLTANAGTSSTELSGLFKGGSGGWVFSPQIDIPIFNAGSLRASLDYSK 368 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++++ A +EV + L + K + V+ +++ L+ YR G Sbjct: 369 IQKDISVSKYEKSIQTAFQEVADGLAARQTYKHQLKAQSDLVQANQEYYRLAERRYRIGV 428 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L +LD +R+ + L + + V+LY A+G G+ Sbjct: 429 DSSLTLLDAQRSLFSAQQTLITDRLSQLTAEVNLYKALGGGWT 471 >gi|300693756|ref|YP_003749729.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum PSI07] gi|299075793|emb|CBJ35099.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum PSI07] Length = 492 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 39/442 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNL-------INIDTLKWWESFNDTSL 61 +LAGCT+ P Y +P P+ P F+ GN N + + L W + F D SL Sbjct: 11 LAAMLAGCTLMPTYQQPATPV-PAAFADASGNRDNTGDGARAPVAVADLGWRDVFTDPSL 69 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG 118 +++++AL N + A I A+ A LFP+ AS S R L ++TG Sbjct: 70 QRVIEMALANNRDLRVAILNIERARAQYRVQDAALFPTVKASGSESSSRTPAAL--SATG 127 Query: 119 Q-----------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSY 164 Q S +++DLFG+ R + + L+ + V++ +++++I+++ +Y Sbjct: 128 QPLVSHTYSATLGFSAYELDLFGRVRSLNTQA--LEQVLSTVEVRRSSQISLIAEVATAY 185 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + ++ + +A L L+ + GA SKL+L + + + S D+ Sbjct: 186 LTMAADQDLLKLAQDTLSSQSDTYRLNQRSYELGAASKLTLRQSQTSVDSARVDVERYTA 245 Query: 225 SFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + L+G PA E L S+ +L I G+ +DL++ RPDI E Sbjct: 246 QVAQDRNALVLLVGAEVPA-ELLPRSLPDSSAAAGSLLATIPPGLTSDLLQRRPDILQAE 304 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKG 338 L + A IG A++ +PS+SL S A T S F G + W+FGP++ LPIFD G Sbjct: 305 HDLKAANANIGAARAAFFPSISLTAS-AGTSSASLAGLFKGGSGVWNFGPQISLPIFDGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++N+ A +S +++ + A +EV +AL + + + Q V+ S Sbjct: 364 ANRANLDIANTSRDIAVAQYEKAIQTAFREVSDALAQRSTLGRQLEAQQSLVDATADSYQ 423 Query: 399 LSMINYRQGRYSLLDILDIERA 420 L+ +++G S L +LD +R+ Sbjct: 424 LATARFKRGVDSYLTVLDSQRS 445 >gi|322421053|ref|YP_004200276.1| NodT family RND efflux system, outer membrane lipoprotein [Geobacter sp. M18] gi|320127440|gb|ADW15000.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M18] Length = 491 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 118/478 (24%), Positives = 213/478 (44%), Gaps = 38/478 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMP--------LLP-----TQFSIGNSKNLINIDTL--K 51 + + + L+ C VGP++ +P P LP G ++ L+ + + Sbjct: 11 VMTAVMTALSACAVGPDFHRPEAPGVERYTPSPLPDATEAAPLPQGEAQRLVAGGEIPAQ 70 Query: 52 WWESFNDTSLNKLVKIALQQN------LTILQATERINAAK--------ENILSVRADLF 97 WW F L +L++ AL ++ L E I A+ + LSV F Sbjct: 71 WWTLFGSQKLEQLIREALARSPNLAAAQAALYQAELIRRAEAGSLLPDLDGALSVERRKF 130 Query: 98 PSSYASISHRFIPN-LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 + AS P L T + + +D FG RR IES A LD ++ A+L Sbjct: 131 --TGASFGQPGGPGGLFTLYNASVSVSYGLDPFGLARRRIESFQAQLDYQRFLLEGARLT 188 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + S L+ + I +ERI I+ ++ + L +++ GA + L+ +A++ Sbjct: 189 LASNLVTTVIQECSLRERIKATRAIIATEEEQLHLVNIRMELGAAVRSELLAQQAQLAQT 248 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + +P LEK + H ++ L G F + + L + + + +P++L+R R Sbjct: 249 RTTLPALEKELALTRHRLAVLAGL--LPFQAATLPEFDLEGLELPLELPVSLPSELVRRR 306 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYL 332 PDIR E+ L + A++G+A ++L+P L++ G S + + F WS G L Sbjct: 307 PDIRASEELLHQASAQVGVATANLFPRLTITGDFGSQSPAPEELFSAGTGIWSIGAGLVQ 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F G++++ A + + ++ETVL A + V + L S+ D + + A Sbjct: 367 PLFRGGELRARREAALAGYSQAQALYRETVLVAFQNVADVLRSLELDARALKAQAEAEAA 426 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S+ L++ YR G + L +LD +R + + L+ AK L+ A+G G+ Sbjct: 427 ARSSLELALTKYRAGAVNHLVLLDAQRQHQQARIALAQAKAARFADSAALFQALGGGW 484 >gi|254237340|ref|ZP_04930663.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa C3719] gi|126169271|gb|EAZ54782.1| Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor [Pseudomonas aeruginosa C3719] Length = 485 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 212/478 (44%), Gaps = 43/478 (8%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFN 57 R+ SL + V+L+GC++ P+Y +P P+ P + G + + + W E F Sbjct: 3 RSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFR 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L +L+ +AL+ N + A + A + RADLFP + R +L T Sbjct: 63 DPQLQQLIGLALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLST 122 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSY 164 + + S W++DLFG+ R + A Q A+ +++ + +Y Sbjct: 123 TGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + ++ + L Y+K+ +L+ + G S L L + + ++E TL + Sbjct: 183 LTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQ 239 Query: 225 SFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 R+ + + L+ G PA Q L + G+P+DL++ RPDI Sbjct: 240 YTRLVAQDQNALVLLLGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDIL 293 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +PS+SL G+++ F + W F P + LPIF Sbjct: 294 EAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFT 353 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++++ A+ +++ + A +EV + L + +LQ +L K S Sbjct: 354 AGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKAS 410 Query: 397 ---MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G + L +LD +R+ + L + S V+LY A+G G+N Sbjct: 411 NEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWN 468 >gi|152985622|ref|YP_001345922.1| outer membrane protein OprM precursor [Pseudomonas aeruginosa PA7] gi|150960780|gb|ABR82805.1| outer membrane protein OprM precursor [Pseudomonas aeruginosa PA7] Length = 485 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 211/478 (44%), Gaps = 43/478 (8%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFN 57 R+ SL + V+L+GC++ P+Y +P P+ P + G + + + W E F Sbjct: 3 RSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFR 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L +L+ +AL+ N + A + A + RADLFP + R +L T Sbjct: 63 DPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLST 122 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSY 164 + S W++DLFG+ R + A Q A+ +++ + +Y Sbjct: 123 TGNPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + ++ + L Y+K+ +L+ + G S L L + + ++E TL + Sbjct: 183 LTLKADQAQLQLTRDTLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQ 239 Query: 225 SFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 R+ + + L+ G PA Q L + G+P+DL++ RPDI Sbjct: 240 YTRLVAQDQNALVLLLGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDIL 293 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +PS+SL G+++ F + W F P + LPIF Sbjct: 294 EAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFT 353 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++++ A+ +++ + A +EV + L + +LQ +L K S Sbjct: 354 AGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKAS 410 Query: 397 ---MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G + L +LD +R+ + L + S V+LY A+G G+N Sbjct: 411 DEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWN 468 >gi|300312742|ref|YP_003776834.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] gi|300075527|gb|ADJ64926.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] Length = 492 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 215/451 (47%), Gaps = 20/451 (4%) Query: 16 AGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTL----KWWESFNDTSLNKLVKIALQ 70 GC + T P + + +P ++ G S ++ + + L WW+ F L++LV+ + Sbjct: 33 GGCAMREVQTDPILEMQVPDKWGGGASADVAHAEQLWPDTDWWKQFGSNELSELVEQGQR 92 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIP---NLKTNST-GQLDSDWK 125 N I A R+ A+ A L PS+ + + R IP TN+ L ++ Sbjct: 93 NNYEIAAAYSRVKQAEAQARIAGAPLLPSAGINAGAAREIPISGGTPTNTANASLQVSYE 152 Query: 126 IDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ID +G+ R +E++ A L + + L V S ++ +Y+ ++R++IA Q + Sbjct: 153 IDFWGKNRAGVEAAEATLRANRYDRETVALTVTSGIVSTYLQVLSLRDRLAIARQNVQNA 212 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ + L + G+ S L L + + + + IP L++ + ++ LLG P F Sbjct: 213 ERVLRLVEAQSRAGSASPLDLARQRSALANQRQLIPDLQQQEQDAQTALAILLGRPPQNF 272 Query: 245 LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 K + +P I+ G+P++L+ RPDIR E LA + A + +A++ L+PS+ Sbjct: 273 -----KVEEKGLARIQMPRISAGLPSELLTRRPDIRRAEASLAAANANVAVARAALFPSI 327 Query: 304 SLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L GS + F G N + G L PIFD GK++ A + +E +++ Sbjct: 328 TLTGSTGAQSSALLSLFDGPNLFANLGAGLIAPIFDGGKLRGQRDLAIAQKEELVQVYRQ 387 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V+ ++ EVE AL +I ++ V+ + + L+ I YR G LL +LD +R Sbjct: 388 RVITSLSEVEKALGAIRSLEERYRLKVGEVDQARFAFELAEIRYRAGAEDLLVVLDTQRT 447 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + L K Q ++ V LY A+G G+ Sbjct: 448 LSEAQNQLGQIKLQRLQATVSLYKALGGGWQ 478 >gi|107027306|ref|YP_624817.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116691297|ref|YP_836830.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105896680|gb|ABF79844.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116649297|gb|ABK09937.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 497 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 185/423 (43%), Gaps = 23/423 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW ++D L+ LV+ AL QN + A R+ A+ A P + A + Sbjct: 77 RWWRLYDDPVLDGLVRDALAQNRDLAAAVARVERARAVFDEAGAARLPDTTAGFGVDYGK 136 Query: 108 FIPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDSAYAQVDIA-KL 154 P+ + D+ W++DL+G+ RH+ + A A ++ Sbjct: 137 HAPDQIVAAAKDTDARTRWGFAPSFSLSWEVDLWGRVRHLVDAAQADADAVQAASDAMRV 196 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ +Y + ERI +A Q + + + L+ + G S L + + A Sbjct: 197 VVAAETTAAYAQVCAYGERIDVAEQSVGIADRLAALTAKQRAHGLVSDLEVARSRAFADD 256 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +D+P L S R ++ ++ L G A L P L P +G A L+R Sbjct: 257 TRADLPALVGSRRAALYELAVLTGR-APGALPDAAAHCRT-APMLARPFPVGDGASLLRR 314 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-----YNTHWSFGPK 329 RPD+R E++LA + A+IG+A ++LYPS+SL GS+ P Y W GP Sbjct: 315 RPDLRESERQLAAANARIGVATAELYPSISLGGSVNWLSTGGDPSTLGDKYAIAWGVGPL 374 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + + ++ + +A + + VL A+KE E AL + L+ A Sbjct: 375 ITWRFPNMAVSRARLAQARADDTLARAQFDAQVLRALKETEQALARYGAAWRRRAALETA 434 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 H ++ L+ +NY G L +LD +R+ V+ L+ + +Q++ V ++ A+G G Sbjct: 435 RAEHARAYRLAELNYEAGALDFLGVLDAQRSLVAVDSALAESTQQVSLDQVAVFKALGGG 494 Query: 450 YNP 452 + P Sbjct: 495 WQP 497 >gi|253998869|ref|YP_003050932.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253985548|gb|ACT50405.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 483 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 53/482 (10%) Query: 9 SLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++ +LAGC ++ P+Y +P P+ Q+ S + W E D L +LV++ Sbjct: 9 AVLAAMLAGCASMAPDYQRPAAPV-AEQWPAQASNQGTPAADIGWREFLLDNRLQQLVEL 67 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------ 121 ALQ N + A I A+ RADLFP+ N+ + T QL Sbjct: 68 ALQNNRDLRVAALNIEQARAEYQVQRADLFPTV----------NVIASRTAQLGSASSTS 117 Query: 122 ----------------------------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 S +++D +G+ R + E +L + + Sbjct: 118 SSTNATTGAVTSSSGGSVVQSYRATVGFSAYELDFWGRIRSLNEQALQSFFATEEARRST 177 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++++S++ +++ +R+ +A L + + +L+ F G S L L +++ + Sbjct: 178 HISLVSEVASAWLTLAADMQRLKLAQDTLQSQQASYDLTKQGFDIGVYSALELRQIQISV 237 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +D+ + + + + L+G P E L QS Q + GIP++++ Sbjct: 238 DTARADVANYRSQVKQDQNALVLLVGQPVPENLL---PQSQPDQVTSVADLPAGIPSEVL 294 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 + RPDI E L + A IG A++ +P+++L GS + F + WSF P+ Sbjct: 295 QRRPDILQAEHSLQAANANIGAARAAFFPTITLTTTLGSASNQLSGLFASGSKVWSFAPQ 354 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G+ +S ++ AE + Q +++ + +A KEV +AL + + Q Sbjct: 355 LTLPIFDAGRNRSKLKSAEVAQQITVAQYEKAIQSAFKEVADALAIRENLTERLQAQQSL 414 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 VE ++S LS +R G S L +LD +R + L + V LY +G G Sbjct: 415 VEASQESYKLSDARFRGGIDSYLAVLDAQRTLYSAQQTLITVNLTAQTNQVTLYKVLGGG 474 Query: 450 YN 451 +N Sbjct: 475 WN 476 >gi|166712661|ref|ZP_02243868.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 373 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/380 (26%), Positives = 183/380 (48%), Gaps = 46/380 (12%) Query: 8 FSLFIVLLAGCTVGPEYTKP-----------HMPLLPTQFSIGNSKNLINIDTLKWWESF 56 +L ++L+GC +GP+Y +P P TQ +GN W F Sbjct: 1 MALAALVLSGCAIGPDY-RPDPPAAMMLQGAQDPAYSTQSPVGNG-----------WSQF 48 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSY--------AS 103 +D L +LV+ AL N + A R+ A+ + R P SS+ + Sbjct: 49 DDPVLEQLVRDALFANHDLRIAVSRVKQARAVFVERRLAQAPHITAHSSFDRCEQQQVVA 108 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + RF L +T LD+ W++DLFG QRR E++ A+LD+ A + ++ V +++ Sbjct: 109 GNQRF---LTEQTTLGLDATWELDLFGRQRRVSEAARADLDAEQANLQDVQVTVAAEVAR 165 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + R ++++ ++ + L L+ ++ GA S+L + A +K+IE+DIP L Sbjct: 166 NSFELRGTEKQLEVSKRTLTNLHDTRRLTQTRWYLGAGSELDVQSSLARLKAIEADIPLL 225 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + H ++ LLG + ++ P +G A L+R RPD+R E Sbjct: 226 ETAQAQYRHRLAVLLGQQPDALDATLVART---MPAFARRQPLGDTAGLLRQRPDVRGAE 282 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGK 339 ++LA + A++G+A +DL+P +S++G + + ++ G WS P + +FD G Sbjct: 283 RRLAAATAQVGVATADLFPRISVSGFVGVLSGDAARLTEGNAKAWSVTPSISWAVFDFGT 342 Query: 340 IKSNIRRAESSAQEQYITWQ 359 +++ +R +++ A+ +Q Sbjct: 343 VRARLRASKAQAEGALAQYQ 362 >gi|290509764|ref|ZP_06549135.1| NodT family efflux transporter, outer membrane factor (OMF) lipoprotein [Klebsiella sp. 1_1_55] gi|289779158|gb|EFD87155.1| NodT family efflux transporter, outer membrane factor (OMF) lipoprotein [Klebsiella sp. 1_1_55] Length = 456 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 227/467 (48%), Gaps = 33/467 (7%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 ++R + I+ L GC + + +P + + P + +G + + + WW +F+D+ Sbjct: 1 MIRPVTLAVILALVGCQSADVQRAQPTLTI-PAAWRADVGPASPVEGV----WWRNFHDS 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLK 113 +LN+ V AL+ N +L A ER+N + + + LFPS AS+S L Sbjct: 56 TLNQYVDRALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLSGTRARAQSAATGLP 115 Query: 114 TNST---GQLDSDWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKLIPSYIDARH 169 +ST G L + + +D++G R S+ A A A L+V S + Y+ Sbjct: 116 IHSTLYKGGLTASYDVDIWGANRSAASAAGASLEAQKAAAAAANLSVASSVAVGYVTLLS 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + Q L + L+ +F G TS+L L++ ++E++S + IP L+ Sbjct: 176 LDEQLRVTQQTLKSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQ 235 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG A + + Q P L +P + P+ L+ RPDI +++L Sbjct: 236 ENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIVQAQRQLVA 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A + +++ L PS++L + +L D + P + WS G + P+ ++ + + Sbjct: 288 ADATLASSQAQLLPSINLTATGSL-QDRTLPELLDNPLRLWSVGGSILAPLLNRQALNAQ 346 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + + + ++++TV A KEV ++L +I+ + + +LQ V + ++++ ++ Sbjct: 347 VDVSMAQRNQALYSYEKTVRGAFKEVNDSLDAISRYGEQLAELQGQVAVAEETLRIAQNR 406 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S LD+LD +R ++ + K L + +DLY A+G G+ Sbjct: 407 YRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIDLYRALGGGW 453 >gi|107028582|ref|YP_625677.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686584|ref|YP_839831.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105897746|gb|ABF80704.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652299|gb|ABK12938.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 508 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 110/461 (23%), Positives = 210/461 (45%), Gaps = 31/461 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P Y +P P+ + G +S N + W E F D L +L+ Sbjct: 21 GCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGAHSANGQAATAIGWREFFVDPRLQRLI 80 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSS-----------YASISHRFIPNLKT 114 +IAL+ N + + I AA+ RA LFP+ A +S P + Sbjct: 81 EIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNIQRLPAGVSTTRAPLISR 140 Query: 115 NSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + W++DLFG+ + + + +LA L +AYA+ ++++++S++ Y+ + Sbjct: 141 TYNVGLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QASEISLVSQVADQYLTLLSTDD 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ ++ ++ ++ Sbjct: 200 LLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQQAQARARAQALNA 259 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L NL + G+P+DL+ RPD+ E+ L + A I Sbjct: 260 LVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQAEQTLLAANANI 316 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 317 GAARAAFFPRISLTAAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLANV 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 377 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVD 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L +L + + L A+ + VDLY A+G G+ Sbjct: 437 SYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 477 >gi|218709532|ref|YP_002417153.1| putative efflux pump outer membrane [Vibrio splendidus LGP32] gi|218322551|emb|CAV18710.1| putative efflux pump outer membrane [Vibrio splendidus LGP32] Length = 502 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 122/477 (25%), Positives = 217/477 (45%), Gaps = 44/477 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +LL GC VGP+Y +P + T Q + N WW FND +LN+LV Sbjct: 16 LLLTGCAVGPDYEEPQTTMAETFLYSQGDVSQDGVSQNEQHNHWWTQFNDPTLNQLVADV 75 Query: 69 LQQNLTILQATERINAA--------------------------KENILSVRADLFPSSYA 102 QN+ + A ERIN A EN S+ +F +S A Sbjct: 76 QSQNIPLKLAAERINMANSYKSVVESFKVPTINVGGGYYNYQLSEND-SLLGPVFGASDA 134 Query: 103 SISHRFIPNLKTNSTGQL---DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VI 157 S + L+ G W++DLFG R +S+ A + A++ + LN + Sbjct: 135 VESATGMSLLEAQHDGGFLGASIAWEMDLFG-RIDKQSNAATIRVEQAEIFQSGLNTLIT 193 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +I +Y+ R +ER IA + + K+ +EL G S+L L + +A + + ES Sbjct: 194 ADVIHNYLQYRGAQERKMIALENIADQKQTLELVTKVVRSGYGSELDLAQAKAMLAATES 253 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRP 276 +P LE + +++ ++ LLG T Q+ F P + I G+P+DL+ RP Sbjct: 254 IVPQLEIAEQVHKQRMAVLLGESLTSV---NQRLVGEFTLPRMNDVIPTGLPSDLLEQRP 310 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLP 333 DIR E+++A ++G + ++ YP L G+ +T D+ F + W+ + Sbjct: 311 DIRIAEREMAAINEELGASIANRYPKFFLTGTPGVTAGSFDDLFSSDSFGWAASAGISWN 370 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+ ++ + E+ + + +Q +V +A EV+++L + ++ ++ A Sbjct: 371 VFDGGRGEAIVEMNEARFRSAALNYQHSVDSAFAEVDSSLFAYGRSQENQKRIDEATLAV 430 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S + Y+ G L +LD +R ++ AK Q A + + +Y A+G + Sbjct: 431 DNAVSKAKSLYKAGLVDYLSVLDAQRQQKAMQDRQVAAKLQTANTTIAVYKALGGDW 487 >gi|91977040|ref|YP_569699.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB5] gi|91683496|gb|ABE39798.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB5] Length = 482 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 210/470 (44%), Gaps = 40/470 (8%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 S +V GC + + P + L P ++ L WW F L +L++ A Sbjct: 18 SALVVGAGGCILTKDLPDPALDL-PPRYKAAALTTTDAPPALDWWRGFRSPELTQLMEEA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLKTNS 116 NL I AT RI A A L PS S +++S+ I + ++ Sbjct: 77 QTVNLDIAAATSRILQADAQARITGAALLPSLTGNSSGSQNKTSGSNVSNTTIAGRRFST 136 Query: 117 -TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDA------- 167 L + ++ID +G+ R + +A D+ L ++ + +Y Sbjct: 137 YAASLSASYEIDFWGKNRDAALAAEETATANRFDRDVVALTTMASVANAYFQVLASQDRI 196 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R +E I+ A +ILD K+ + G S L + + E+ + + + +P L + Sbjct: 197 RTAQENIASAQRILDAIKQ-------RLAAGTGSDLDVAQQESVLANQRAAVPLLRVTLA 249 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 N++ ++TL+ P E + + N L P G+P++L+ RPDIR QE +LA Sbjct: 250 QNINTLATLVSRP-PEAVKILGGSLNRLSSPLVTP---GMPSELLTQRPDIRRQEAQLAA 305 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A +G A++ +PS+ L G + F T + L PIFD G+I N Sbjct: 306 ATANVGSARAQFFPSIQLTGQGGYQSAVLASLFTPQATFSNLAAGLTQPIFDGGRISGNF 365 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ E T+++TV++A +V+NAL SI ++ + + + V +++ SL+ Sbjct: 366 DLTKAQQDELLQTYRKTVVSAFADVDNALESIKQNTERLRLQRQVVASSRRAFSLAEQQL 425 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 R G ++ +L+ + + E S+ + QLA+ + V L+ A+G G+ P Sbjct: 426 RAGTADIVTVLNTQLTLFQAED--SLIQTQLARYLAIVSLFQALGGGWEP 473 >gi|300698264|ref|YP_003748925.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum CFBP2957] gi|299074988|emb|CBJ54557.1| Putative outer membrane drug efflux lipoprotein [Ralstonia solanacearum CFBP2957] Length = 483 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 217/459 (47%), Gaps = 30/459 (6%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC++ P Y +P M L T+ ++ + WW+ F+D LN+L++ AL++N Sbjct: 21 GCSLAPPYERPAMELPAHWQTEAPWRAAQPADDAPKGPWWQRFDDPQLNQLMEQALRENQ 80 Query: 74 TILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPNLKTNST 117 ++ A + A+ RA L P A S S + ++ + Sbjct: 81 SLKVAVSNLEQAQALTRVARASLLPQVTAATNDTRLRTSADRPLSSYSTPTVSTVQNDLV 140 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + D ++ DLFG+ R +I ++ A+ A A ++ +L + +++ ++ + R I + Sbjct: 141 VRADVSYEADLFGRVRSNIANATASEAQAAANLENFRLLLAAQVATTWYNLRETDAEIDV 200 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L L +K + + G S L L + +A + + + L+K H ++TL Sbjct: 201 VQQGLALQRKALAFVTSRHQDGVASGLDLAQQQALVDTTATQAELLQKQRTQYEHALATL 260 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA F ++ QP + I + +P+D+I RPD+ E+ A + A +G+A+ Sbjct: 261 VGTPAPAF--HLAPVPLAGQPPV---IPVALPSDVIERRPDVAAAERGAAAANASVGVAR 315 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+ L G + F + WSFG ++ +FD G+ ++ + A++ + Sbjct: 316 AAFFPSIMLGGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRARVDFADAGYRG 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A++EVE+ L+ + + T+ + +VE +K ++ Y G + LD Sbjct: 376 AIANYRQTVLGALQEVEDGLSGLQALDRAATQARASVESARKVYDIASARYEGGLATSLD 435 Query: 414 ILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++A + + I +QL S V L A+G +N Sbjct: 436 VITAQQALLNNQRTAVQILGQQLTTS-VFLVKAVGGDWN 473 >gi|190576446|ref|YP_001974291.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] gi|190014368|emb|CAQ48015.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] Length = 489 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 126/485 (25%), Positives = 217/485 (44%), Gaps = 46/485 (9%) Query: 1 MNILRAIFSLFIVL--LAGC-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL-- 50 MN L + L LA C TVGP+Y P P F + + L Sbjct: 1 MNAALPRLGLIVALASLAACRTVGPDYALPEGSAFKRPEANAAFIDTQNPQVAANQALPD 60 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RAD 95 +WW +ND L+ L+ AL+ N+ + A R A E L RA Sbjct: 61 RWWSLYNDPVLDGLITQALRDNVELKAADAHLRRAAAVYEQALDAGGFEYEAEAGVSRAQ 120 Query: 96 LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 L S+ + NL + G+ ++ DLFG+ +R E++ A+ S A D+A++ Sbjct: 121 LSAESFLQEHELPVINL---ADGKFAVSYQFDLFGKLKRGAEAARADEQSVAAARDLAQV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V++++ SY++ H + +A L L +++ ++ G + L + A++ Sbjct: 178 SVVAQVADSYLEICHANHELHVAEHSLQLQQRSRSVTERLIAAGRGTPPELARANAQVAL 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 +E+ +P L ++++ LLG PA E P L P+ +G Sbjct: 238 LEAALPPLRAQRSAAAYSLAALLGKTPGQLPAGEI-------DCAHAPGLAQPLPVGDGR 290 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 L++ RPD+R E+KLA + A+IG+A ++LYP + L G+ L D P WS Sbjct: 291 ALLQRRPDVRQAERKLASATARIGVATAELYPDIRLGASVGAAGLLEDFGTP-MTRQWSI 349 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 GP + + G + I AE+ A + TVL A++E + AL +D + + L Sbjct: 350 GPLISWTLPSSG-THARIHAAEAGADAALAEFDHTVLQALRETQTALDRYAQDLRRLQSL 408 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + A E + + Y+ GR L LD +R+ A + L+ A+ Q+++ + L++ + Sbjct: 409 RIAQEQAALAAEQNRRLYQGGRTPYLSSLDADRSLATSDATLAAAEAQVSRDQIHLFLVL 468 Query: 447 GSGYN 451 G G+ Sbjct: 469 GGGWQ 473 >gi|148557407|ref|YP_001264989.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148502597|gb|ABQ70851.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 480 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 120/482 (24%), Positives = 218/482 (45%), Gaps = 38/482 (7%) Query: 4 LRAIFSLF-IVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +R+ F L + LLAGCTVGP+Y P P WW + D Sbjct: 1 MRSPFWLVPMTLLAGCTVGPDYRGPVSAGAAPPPAAFARADRDAAPQAPAAAAWWTALGD 60 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNS 116 L++L + AL + ++ A R+N A+ + RA+ P + AS H +P + S Sbjct: 61 PVLDELERRALAGSPSVAIAQARLNQARSALGLERANSLPKANASAVYVHARVPGVDLGS 120 Query: 117 TGQ-----------------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 + Q D+ W+IDLFG QRR++E++ A+L +A A + A Sbjct: 121 SNQNGGTGGGGGTGEDQESLNFYNVGFDASWEIDLFGGQRRNLEAARASLGAAEANLADA 180 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++++ +++ +Y+ R + R+ +A + + + +L+ + +GA S L + + ++ Sbjct: 181 RVSLAAEVAQAYVALRDRQHRLELARESAEKQRAIYDLTAERRDRGAASTLDVERQRGQV 240 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + + L + + ++TL G + + + +G PA L+ Sbjct: 241 EQSNAAVLPLGADYDAYRNALATLTGEVPGALDDLLAAPAAVPL--PPAEVAVGDPAALL 298 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGP 328 + RPD+R E+KLA S AKIG+AK+ +P LS G I L D P + P Sbjct: 299 QRRPDVRAAERKLAASTAKIGVAKAAAFPRLSFLGLIGLGGTSIGDVVDPDKLAAVAV-P 357 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L D G+ + + +AE + E ++ VL A+++ E+AL+ ++ V Sbjct: 358 QLSWNFLDFGRNAARVGQAEGARDEAAAQYRSAVLVALRDAEDALSRYGARRQAVVTAAR 417 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + S +L + G + +++LD ER + L AK Q+ ++ L A+G Sbjct: 418 SKASADTSATLVRQRFDAGTATRIELLDAERQRIAADQALIQAKAQMTTDFIALEKALGL 477 Query: 449 GY 450 G+ Sbjct: 478 GW 479 >gi|121595147|ref|YP_987043.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|222111489|ref|YP_002553753.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|120607227|gb|ABM42967.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] gi|221730933|gb|ACM33753.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 475 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 13/412 (3%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-H 106 D +WW D L LV+ ALQ + ++ A + A+ A L PS AS S Sbjct: 65 DLAQWWRQLGDAQLTGLVERALQSHTSMRSARAAVEQARAQRDVQAAGLLPSVNASGSAQ 124 Query: 107 RFIPNLKTNSTGQ--LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 R N T +T Q LD+ W+ DLFG+ + +S A+L +A V A++ + +++ + Sbjct: 125 RSRSNGSTGNTFQAGLDASWEPDLFGRLSSGVRASEADLLAAEEGVAAAQVALAAEVAVN 184 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R ++R+ IA Q L + ++ + G S L+ + A ++ + +PTL+ Sbjct: 185 YISLRSQQQRLQIAQQNLAAQSETAQIVQWRVQAGLASSLAAEQARAAVEQTAAQVPTLQ 244 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPDIRYQ 281 H ++ L G P + + QP P ++ + PAD +R RPD+R Sbjct: 245 AGIAQARHALAVLTGQPPAALDEALAAHAPVPQP----PADLALAFPADTLRQRPDVRQA 300 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+++ + ++ A++ PSL ++G++ ALT G T S + LP+FD G Sbjct: 301 EQRVRAAWERVAQAEAQRMPSLRISGTLGLRALTLGALTGGGATVASLLSSVSLPVFDGG 360 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++ +R E++ Q+ + ++E+VL A+K+VE+AL ++ D+ + +L A E + Sbjct: 361 ALRAQVRAQEAALQQAQVGYEESVLGALKDVEDALVALQGDRDRLQRLSAAAEAAGNAAL 420 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ Y G +LD +R + ++ ++ +V LY A+G G+ Sbjct: 421 LAQNQYASGLVDFQTVLDTQRTLLSAQDSVASTAASVSTDHVRLYKALGGGW 472 >gi|241767864|ref|ZP_04765438.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] gi|241361036|gb|EER57758.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] Length = 460 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/437 (23%), Positives = 200/437 (45%), Gaps = 32/437 (7%) Query: 17 GCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GCT + P + P +P+ P ++ ++ W + F D L L+ AL+ N + Sbjct: 38 GCTSMVPPHEAPALPV-PARYGGASADAGTTAADTAWRDYFTDPQLQALIAQALENNRDL 96 Query: 76 LQATERINAAKENILSVRADLFPS--SYASISHRFIP---NLKTN-------STGQLDSD 123 A R+ AK RADL P+ + A + +P NL G + Sbjct: 97 RTAMLRVQEAKAAYGIQRADLLPTLGAQAGMERSRVPADLNLTRQPLLGNQYQVGLGLAS 156 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID +G+ R + +++L N ++ A + +I+++ S + R ER+ +A Q + Sbjct: 157 WEIDFWGRVRSLRDAALENYLASEAAHRAVTVGLIAQVANSALALREIDERLELARQAIT 216 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++++ + + G+ S+L+L +++ + ++ LE++ + ++ L+G P Sbjct: 217 SREESLRIFQRRVDVGSASRLNLTQVQTLLTQAQALGAQLEQARAQQANALALLMGAPTA 276 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + P+ +G+P+DL+ RPDI E +L + A IG A++ +P Sbjct: 277 P-----AAMTTPLDSLAMPPLRVGLPSDLLTQRPDIIAAEHQLRAAEANIGAARAAFFPR 331 Query: 303 LSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 ++L GS+ T G H W+F P + +P+F+ G++++N+ E + Sbjct: 332 VALTGSLG-TASAELGGLFDHGSQAWTFAPTISVPLFNAGRLRNNLNVTEVRRDIAVANY 390 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ V A ++V +AL + + Q A + LS + Y G + L++LD E Sbjct: 391 EKAVQGAFRDVSDALAVREALARQLGIAQAARTAQGERARLSQLRYGHGAAAFLEVLDAE 450 Query: 419 RATAKVEVDLSIAKRQL 435 R DL +A +Q+ Sbjct: 451 R-------DLLVADQQV 460 >gi|27378820|ref|NP_770349.1| outer membrane efflux protein [Bradyrhizobium japonicum USDA 110] gi|27351969|dbj|BAC48974.1| bll3709 [Bradyrhizobium japonicum USDA 110] Length = 218 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 3/193 (1%) Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFP 318 +P+ G+PADL+ NR D+ E+KLA + AKIG A++D YPS+SL GS+ + Sbjct: 1 MPLPTGVPADLLTNRSDVASAERKLAQATAKIGAAEADRYPSISLTGSVGTSAIRAGDLA 60 Query: 319 GYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 Y++ WS GP + +P+FD GK + +R AE+ + + T+ T+L+A+++VENAL +++ Sbjct: 61 KYSSVSWSVGPSITVPVFDAGKRYATVRIAEAQRDQAFATFHSTLLSALEDVENALVALS 120 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +K KL A + ++++ LS + G + LD+LD ER+ E L ++ +AK Sbjct: 121 REKARAGKLAEAAKNYREAARLSRSLFETGSSNFLDVLDAERSLYSAEDSLIQSQVAIAK 180 Query: 438 SYVDLYIAIGSGY 450 YV L A+G G+ Sbjct: 181 YYVTLAKALGGGW 193 >gi|260598054|ref|YP_003210625.1| hypothetical protein CTU_22620 [Cronobacter turicensis z3032] gi|260217231|emb|CBA31130.1| hypothetical protein CTU_22620 [Cronobacter turicensis z3032] Length = 470 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/453 (24%), Positives = 219/453 (48%), Gaps = 32/453 (7%) Query: 17 GCTVGP-EYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC G E +P + + P + ++G S WW +F+D++LN+ V AL+ N Sbjct: 17 GCHSGSVEQARPTLVIPPAWRAAVGPSSPTEGF----WWRNFHDSALNRYVDQALRYNSD 72 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWK 125 +L A ER+N + + + D FP+ A +S +P G L++ + Sbjct: 73 VLLARERVNQYQAQVQAALGDRFPTLDAGLSAGRSRSQSAATGLPVYGDLYKGSLNASYN 132 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D++GQ +++ A+L++ A A L V S++ YI E++ + L Sbjct: 133 VDIWGQYASAADAARASLEAQKAAAAAANLTVASQVASGYITLLALDEQLRVTQSTLAAR 192 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY---PA 241 + ++L+ ++ G +S+L L++ E+E+++ + IP ++ + +S L+G P Sbjct: 193 EDALKLAKRQYETGYSSRLELMQSESEVRATRAQIPQIQHQITQQENALSILIGQNPGPV 252 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + P L IP + P+ L+ RPDI E+ L S A++ +A++ L P Sbjct: 253 ARGGEF-----DALSP-LTIPSQL--PSSLLNRRPDIVQAEQTLVASDAQLQVARARLLP 304 Query: 302 SLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 ++L S +L +N+ P + WS G + P+ ++ + + + S + + Sbjct: 305 GINLTASGSL-QENTLPELLANPLRLWSVGASVLAPLLNREALNAQVDVTTSQKNQALYS 363 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ TV NA KEV ++L ++ + + +LQ + ++++ ++ Y+ G S LD LD Sbjct: 364 YERTVRNAFKEVNDSLDAVQRLGEQLVELQAQAQAAQETLRIAHNRYQNGYASYLDELDA 423 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R ++++ K L + VDLY ++G G+ Sbjct: 424 RRTLFSAQLNVVQVKNNLLLAQVDLYRSLGGGW 456 >gi|296115974|ref|ZP_06834597.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] gi|295977546|gb|EFG84301.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] Length = 527 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 109/474 (22%), Positives = 219/474 (46%), Gaps = 38/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTLKWWESFNDT 59 +R + +++LAGC + P Y PH ++PT Q + + + +WW++F D Sbjct: 11 MRGVGLASMLMLAGCDLAPAYHAPHY-VIPTTWQGQAPFAPAHPMDDSVRAEWWKAFTDP 69 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI-- 109 L++L A N + A ER A+ + R+DL P S+ S + R Sbjct: 70 RLDELEAEATAHNGNLQAAAERFLQARSVVSEARSDLLPHFGLAFGGSNNKSSAERLFRY 129 Query: 110 --PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-----KLNVISKLIP 162 P ++ + W+ D + R+ L YAQ A +L++ ++L Sbjct: 130 KGPITDSDEFYGGMASWEPDFWSSIRN----RVRLQKDYAQEQAAEYASARLSLQAELAS 185 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y R + +I Q + Y+ ++ ++ + A S+L + + E ++ + ++ + + Sbjct: 186 DYFTLRGLDAQANIYTQSIRYYEDSLRVTRTRLQDQAASRLDVARAENQLYTTQAHLLDI 245 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + H I+ L+ + F N + + ++ G+P++L+ RPDI E Sbjct: 246 QAQREVMEHAIAVLVNVAPSSFHLAPDSHLNTNR----VALSPGVPSELLERRPDIAMAE 301 Query: 283 KKLADSVAKIGIAKSDLYP--SLSLNGSIALTHDNSFPGYN---THWSFGPKLYLPIFDK 337 +++A + IGIA++ YP S ++G DN F N + W++G + LPIF+ Sbjct: 302 RQMAQANRAIGIARAAFYPHVSFRMDGGF---DDNGFNLANLANSMWTYGATVTLPIFEG 358 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++ ++++ S+ +E ++ TVL A ++VE+ L+ +L+ AV ++ Sbjct: 359 GLRRAQLQQSWSAYRETRDHYRMTVLTAFRDVEDGLSRTKRLDDENARLRAAVGAASQTQ 418 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++M Y+ G + LD+L + +T + + + + ++ V L A G G+N Sbjct: 419 DITMNLYKGGLAAYLDVLIAQVSTLEARIQQVEVQTRYLQAQVGLIRACGGGWN 472 >gi|77458436|ref|YP_347941.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382439|gb|ABA73952.1| putative cation transport lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 472 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/453 (23%), Positives = 217/453 (47%), Gaps = 24/453 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 C++ P+Y +P P Q+ G +++ + W FND +L +L++ AL N Sbjct: 18 CSLIPDYQRPASPSA-AQYPQGPAYAAQSPVTPRVEDWRALFNDPALQQLIESALVNNRD 76 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNSTGQLDSDWKI------ 126 + A + A + RADL P+ A+ + + +P+ T + + S + + Sbjct: 77 LRVAALNVEAFQAQYRIQRADLLPAVSANANELRQRVPSSVTRTKAAITSTYSVNLGISA 136 Query: 127 ---DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 D FG+ R + E +L S A+L++++ + +Y+ R +E +++A + L Sbjct: 137 YELDFFGRVRSLSEQALLTWLSTEEARRSAQLSLVANVANAYLTWRADQELLALAQETLA 196 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++++ L+ G +S L ++ + + S + + ++ ++++++ L+G P Sbjct: 197 ADERSLHLTTRNREAGKSSALDQIQAQTSVDSTRASLARYQRQVAQDLNSLTLLVGAPVP 256 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 E L + +L + G+P+DL++ RPDI E KL + A IG A++ +PS Sbjct: 257 EHLP-----ARPLDSDLVATVPAGLPSDLLQRRPDILQAEYKLRAANANIGAARAAFFPS 311 Query: 303 LSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL G+ + F G + W+F P++ LPIF+ G +++++ A+ ++ Sbjct: 312 VSLTANAGTSSRDLSRLFKGGSGTWTFQPQINLPIFNAGSLRASLDYAKLQKDITVAEYE 371 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +T+ A +EV + L + ++ + + V+ + ++ YR G S L LD +R Sbjct: 372 KTIQTAFQEVSDGLAARQTYEQQLQAQRDLVQATQDYYDMAQHRYRSGVDSSLTFLDAQR 431 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + L + + V+LY A+G G++P Sbjct: 432 SLFSSQQGLITDRLAQLVAQVNLYTALGGGWSP 464 >gi|313200962|ref|YP_004039620.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312440278|gb|ADQ84384.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 483 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 53/482 (10%) Query: 9 SLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++ +LAGC ++ P+Y +P P+ Q+ S + W E D L +LV++ Sbjct: 9 AVLAAMLAGCASMAPDYQRPAAPV-AEQWPAQASNQGTPAADIGWREFLLDNRLQQLVEL 67 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------ 121 ALQ N + A I A+ RADLFP+ N+ + T QL Sbjct: 68 ALQNNRDLRVAALNIEQARAEYQVQRADLFPTV----------NVIASRTAQLGSASSTS 117 Query: 122 ----------------------------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 S +++D +G+ R + E +L + + Sbjct: 118 SSTNATTGTVTSSSGGSVVQSYRATVGFSAYELDFWGRIRSLNEQALQSFFATEEARRST 177 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++++S++ +++ +R+ +A L + + +L+ F G S L L +++ + Sbjct: 178 HISLVSEVASAWLTLAADMQRLKLAQDTLQSQQASYDLTKQGFDIGVYSALELRQIQISV 237 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +D+ + + + + L+G P E L QS Q + GIP++++ Sbjct: 238 DTARADVANYRSQVKQDQNALVLLVGQPVPENLL---PQSQPDQVTSVADLPAGIPSEVL 294 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 + RPDI E L + A IG A++ +P+++L GS + F + WSF P+ Sbjct: 295 QRRPDILQAEHSLQAANANIGAARAAFFPTITLTTTLGSASNQLSGLFASGSKVWSFAPQ 354 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G+ +S ++ AE + Q +++ + +A KEV +AL + + Q Sbjct: 355 LTLPIFDAGRNRSKLKSAEVAQQITVAQYEKAIQSAFKEVADALAIRENLTERLQAQQSL 414 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 VE ++S LS +R G S L +LD +R + L + V LY +G G Sbjct: 415 VEASQESYKLSDARFRGGIDSYLAVLDAQRTLYSAQQTLITVNLTAQTNQVTLYKVLGGG 474 Query: 450 YN 451 +N Sbjct: 475 WN 476 >gi|254521389|ref|ZP_05133444.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] gi|219718980|gb|EED37505.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] Length = 489 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 219/480 (45%), Gaps = 36/480 (7%) Query: 1 MNILRAIFSLFIVL--LAGC-TVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL-- 50 MN L + L LA C TVGP+Y P P F + + L Sbjct: 1 MNAALPRLGLIVALASLAACRTVGPDYALPEGSAFKRPQANAAFIDTQNPQVAANQALPD 60 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RAD 95 +WW +ND L+ L+ AL+ N+ + A R A E L RA Sbjct: 61 RWWSLYNDPVLDGLITQALRDNVELKAADAHLRRAAAVYEQALDAGGFEYEAEAGVSRAQ 120 Query: 96 LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 L S+ + NL + G+ ++ DLFG+ +R E++ A+ S A D+A++ Sbjct: 121 LSAESFLQEHELPVINL---ADGKFAVSYQFDLFGKLKRGAEAARADEQSVAAARDLAQV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V++++ SY++ H + +A L L +++ ++ G + L + A++ Sbjct: 178 SVVAQVADSYLEICHANHELHVAEHSLQLQQRSRSVTQRLIDAGRGTPPELARANAQVAV 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +E+ +P L+ ++++ LLG + + ++ P L P+ +G L++ Sbjct: 238 LEAALPPLQAQRSAAAYSLAALLGQTPGQLPAGVIDCAHA--PALAQPLPVGDGRALLQR 295 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E+KLA + A+IG+A ++LYP + L G+ L D P WS GP + Sbjct: 296 RPDVRQAERKLASATARIGVATAELYPDIRLGASLGAAGLLEDFGTP-MTQQWSIGPLIS 354 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + G + I AE+ A + TVL A++E + AL +D + + L+ A E Sbjct: 355 WTLPSSG-THARIHAAEAGADAALAEFDHTVLQALRETQTALDRYAQDLRRLQSLRTAQE 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y+ GR L LD +R+ A + L+ A+ Q+++ + L++ +G G+ Sbjct: 414 QAALAAEQNRRLYQGGRTPYLSSLDADRSLATSDATLAAAEAQVSRDQIHLFLVLGGGWQ 473 >gi|241518387|ref|YP_002979015.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862800|gb|ACS60464.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 474 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 131/484 (27%), Positives = 219/484 (45%), Gaps = 76/484 (15%) Query: 4 LRAIFS-----LFIVLLAGCT-----------VGPEY--TKPHMPLLPTQFSIGNSKNLI 45 +R +FS + +L+GCT V P + T PH G S L+ Sbjct: 1 MRIVFSSVSILAILAVLSGCTSLGALKPSRSVVAPYWHATLPHG---------GRSPELV 51 Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 WW SF D SL +L+ +A ++N T+ +A I+ A+ + S RA LFPS S S Sbjct: 52 -----AWWASFKDPSLTELLTLAERENPTVQEAVANIDKARATLDSARAGLFPSLDGSAS 106 Query: 106 HRFIPNLK---------TNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI----- 151 N TN +G LD+ W++DLFG+ + E+ A L AQ + Sbjct: 107 ATREANTGDDLNKIVAGTNRSGGLDAAWELDLFGKTKK-ETQAAAL---RAQGKVWSWHD 162 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK---- 207 A+++V +++ Y+ R ++ + L ++ I + G TS L Sbjct: 163 ARISVAAEVGDYYVQYRACRQLEQLYRDELASQRETILATEKSAQSGFTSTADLALSRAS 222 Query: 208 -------LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN-L 259 L A+ E + +L + + I TLL + +S QP+ L Sbjct: 223 AATSSSNLTAQRGDCEIIVKSLVQLTATDELVIKTLLDH----------GKSRIPQPSSL 272 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 I + +PAD++R RPDI E ++A +++ +G AK+DLYPSLSL+ ++ G Sbjct: 273 RI---VSVPADVLRQRPDINALEAEVAATISDVGAAKADLYPSLSLS-GSISISQSTVTG 328 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + WSFGP L +P+FD G ++ +R A + +++ VL A+ +VE AL +N Sbjct: 329 RSVPWSFGPALSIPLFDGGTKRAAVRSAVADYDVAVASYKSGVLTAVADVETALIRVNTA 388 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 K + + A + ++ N++ G S+LD + R+ + L +R + + Sbjct: 389 LKRIGDAKTAADNYQSYFRSVDENWKSGGASILDREEARRSAQSAAITLIEIRRDAVQYW 448 Query: 440 VDLY 443 + LY Sbjct: 449 IALY 452 >gi|260548974|ref|ZP_05823196.1| outer membrane protein oprM [Acinetobacter sp. RUH2624] gi|260408142|gb|EEX01613.1| outer membrane protein oprM [Acinetobacter sp. RUH2624] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 213/422 (50%), Gaps = 15/422 (3%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + +I + + F D L +++ +AL N + +AT I A+E + + P+ Sbjct: 46 NSASGTSIAEQGYKQFFADPRLLEVIDLALANNRDLRKATLNIERAQEQYQITKNNQLPT 105 Query: 100 SYASIS--HRFIPNLKTN---STGQLD---SDWKIDLFGQRRHI-ESSLANLDSAYAQVD 150 AS S + P+ N ST Q+ + +++D +G+ R + +++L N S + D Sbjct: 106 IGASGSAIRQVTPSRDPNNPYSTYQVGLGVTAYELDFWGRVRSLKDAALDNYLSTQSARD 165 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 ++++IS++ ++++ + +A Q L + + L+ +F G S++ L + + Sbjct: 166 STQISLISQVAQAWLNYSFATANLRLAEQTLKAQQDSYNLNKKRFDVGIDSEVPLRQAQI 225 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 +++ +D+ + + ++ L+G P + L Q Q N++ G+P+D Sbjct: 226 SVETARNDVANYKTQIAQAQNLLNLLVGQPVAQNLLPTQPVKRIAQQNVFT---AGLPSD 282 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFG 327 L+ NRPD++ E L+ + A IG AK+ L+P++SL GS + F WS G Sbjct: 283 LLNNRPDVKAAEYNLSAAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFAWSIG 342 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L LPIFD G ++N++ +E+ + ++++V +A +EV +AL + + +T Q Sbjct: 343 PSLDLPIFDWGTRRANVKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTAQQ 402 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE ++ +LS +R G S L +LD +R++ E L + ++ + ++LY +G Sbjct: 403 RLVEATNRNYTLSNARFRAGIDSYLTVLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLG 462 Query: 448 SG 449 G Sbjct: 463 GG 464 >gi|194444433|ref|YP_002039587.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403096|gb|ACF63318.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 110/465 (23%), Positives = 218/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F+D L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHDPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVMDESEINRRYEA 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ + IP + G+P+ L+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLT-EVAIPTTLPGGLPSVLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGT-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|330015030|ref|ZP_08308060.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Klebsiella sp. MS 92-3] gi|328532118|gb|EGF58923.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Klebsiella sp. MS 92-3] Length = 459 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 227/463 (49%), Gaps = 33/463 (7%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 ++R + ++ L GC + + +P + +P + +G + + + WW +F+D+ Sbjct: 1 MIRPVALAIVLALVGCQSADVQRAQPTL-TIPAAWRADVGPASPVEGV----WWRNFHDS 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLK 113 + N+ V AL+ N +L A ER+N + + + LFPS AS++ L Sbjct: 56 TFNQYVDQALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLTGTRARTQSAATGLP 115 Query: 114 TNST---GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +ST G L + + +D++G R ++ A+L++ A A L+V S + Y+ Sbjct: 116 IHSTLYKGGLTASYDVDIWGANRSAANAAGASLEAQKAAAAAANLSVASSVAVGYVTLLS 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + Q L + L+ +F G TS+L L++ ++E++S + IP L+ Sbjct: 176 LDEQLRVTQQTLTSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQ 235 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LLG A + + Q P L +P + P+ L+ RPDI E++L Sbjct: 236 ENALSVLLGDNPGAVKRGEFAQ-----LTP-LRLPSQL--PSTLLNRRPDIAQAERQLVA 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 + A + +++ L PS++L + +L D + P + WS G + P+ ++ + + Sbjct: 288 ADATLASSQAQLLPSINLTATGSL-QDRTLPDLLDNPLRLWSLGGSILAPLLNRQALNAQ 346 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + + + ++++TV +A KEV ++L +I+ + +++LQ + ++++ ++ Sbjct: 347 VDVSMAQRNQALYSYEKTVRSAFKEVNDSLDAISRYGEQLSELQEQETVAQETLRIAQNR 406 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 YR G S LD+LD +R ++ K L + +DLY A+ Sbjct: 407 YRNGYSSYLDVLDAQRTLFSTQLSGVQVKNNLLLAQIDLYRAL 449 >gi|163857338|ref|YP_001631636.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163261066|emb|CAP43368.1| probable outer membrane efflux protein [Bordetella petrii] Length = 485 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 221/474 (46%), Gaps = 54/474 (11%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIG-----NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GCT+ P Y +P P+ P+ + G S +++ D + W + F D L +L+ +A Sbjct: 20 GCTLAPTYERPAAPVSGAYPSGPAYGQQGQDGSPDVVAAD-IGWRDFFADPLLQRLISMA 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNS---------- 116 L+ N + A + A+ RADL P S + +P T S Sbjct: 79 LEANRDLRVAALNVEEARAQYRIQRADLLPGVGVAGQGSVQRLPGDLTQSGEPGISRSYQ 138 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHFKER 173 G S W++DLFG+ R + S L++ AQ + +L +I++ +Y+ R +E Sbjct: 139 VGGAISSWELDLFGRIRSL--SEQALETYLAQDETRTATQLALIAETAGAYLALRADQEL 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +S+ L + + L+ + G ++L L + E +++ + ++ + + + + Sbjct: 197 LSLTQSTLAAQQDSYRLTKQSYDLGVATELDLSQAEIALRTAQRNLSQYTRLAARDRNAL 256 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G P + Q+ + P+ +P + G+P+DL+ RPDIR E +L + A Sbjct: 257 VLLVGQPLPADVAAQLDQATSL-PDGIMPRMLPAGLPSDLLARRPDIRAAEHQLKAANAN 315 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P++SL GS A T S G + WSF P + +PIF G +++++ + Sbjct: 316 IGAARAAFFPTISLTGS-AGTASASLGGLFDAGSGAWSFAPSITVPIFAGGALRASLDAS 374 Query: 348 ESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVELHKKSMSLS 400 + Q +++++ A +EV +AL T I + +V Q A +L ++ Sbjct: 375 KVRKNIQVAQYEKSIQTAFREVSDALAGRATLETQIEAQRLLVNASQRAYDLSQQRFEQG 434 Query: 401 MINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + NY L +LD +R ++ +V V+ +A+ + V LY +G G+ Sbjct: 435 IDNY-------LSVLDAQRSLYSSQQVLVETRLAR---LSNLVTLYRTLGGGWT 478 >gi|224539828|ref|ZP_03680367.1| hypothetical protein BACCELL_04738 [Bacteroides cellulosilyticus DSM 14838] gi|224518574|gb|EEF87679.1| hypothetical protein BACCELL_04738 [Bacteroides cellulosilyticus DSM 14838] Length = 456 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 221/459 (48%), Gaps = 41/459 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + L+ GC++ Y++P + + +K+ +I TL W F+D +L L+ L++ Sbjct: 16 VCLMTGCSIYKPYSRPEVQTEGLYRDLEETKDTASIATLGWRNLFSDKNLQALIDKGLER 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNSTGQL--DSDWK 125 N + A R+ AA+ +++ R PS SIS K T L + W+ Sbjct: 76 NTDLRVAHTRVKAAEAVLMNARLSYLPSVVLAPDGSISG--TEGAKAIKTYNLAASASWE 133 Query: 126 IDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 IDLFG+ + + +LA L+ + A + +I+ + SY ++ I+ Q L + Sbjct: 134 IDLFGKVTNAKREALAALEGSRAYRQAVETQLIATIANSYYMLLMLDRQLIISEQTLITW 193 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K+ G ++ ++++ +A ++E+ + ++ KS R + +S LL + + Sbjct: 194 KETEHSIEALKRAGKSNDAAVLQAKANRLALEASVVSIRKSIRETENGLSALLADTSHDI 253 Query: 245 LH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + +QKQ F L + G+P L+ NRPD+R E LA + A+S YPSL Sbjct: 254 MRGALQKQ--QFPDTL----SAGLPVQLLANRPDVRQAEWNLAQAYYATNAARSAFYPSL 307 Query: 304 SLNGSIALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 +L+GSI T++ PG W F L P+F+KG +N+R+A++ +E + Sbjct: 308 TLSGSIGWTNNVGGVVVNPG---SWLFSAVGSLMQPLFNKGTNIANLRQAKARQEEALLL 364 Query: 358 WQETVLNAIKEVENALTSINE--------DKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +Q+++L+A KEV NALT +++I+T LQ AV + M + NY Sbjct: 365 FQQSLLDAGKEVNNALTRWQSARIRMDYVNQQIMT-LQEAVRKTELLMQHTSTNY----- 418 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L++L + + E+ + K + + +DLY A+G Sbjct: 419 --LEVLTARQRLLEAELTQAQDKFEEIQGVIDLYHAVGG 455 >gi|325265632|ref|ZP_08132322.1| outer membrane efflux protein OprM [Kingella denitrificans ATCC 33394] gi|324982902|gb|EGC18524.1| outer membrane efflux protein OprM [Kingella denitrificans ATCC 33394] Length = 511 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 120/458 (26%), Positives = 217/458 (47%), Gaps = 23/458 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNK 63 I + + L+ C + P+Y +P + L +QF + +++ I +L W + F D L+ Sbjct: 42 ILTGVSLALSACNLAPKYERPEVELPSSQFRHNKVSDTR-AIQAASLGWKDYFADPRLHA 100 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK----TNSTGQ 119 L+++AL+ N + A + + R+ PS S N++ + S G Sbjct: 101 LIELALKNNTDLRTANLNVEQVRAQYAITRSAELPSLNGSAGATRSGNVQGVGNSFSVGL 160 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 S +++DL+G+ R E++L + + A D L++IS + +Y + ++ +A Sbjct: 161 GISAFELDLWGRVRNSSEAALQSYFATAASRDSTHLSLISTVAKAYFNQQYALASADLAQ 220 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L ++ LS L++ G S L L + EA I + ++ K+ + + I L+ Sbjct: 221 RVLKTRQETYRLSQLRYRAGVISALDLREQEATIAAAQASYAEAVKNAEVARNQIELLIS 280 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + L S F+ +P G+P+DL+ NRPDI E + + A IG A+++ Sbjct: 281 QKIPDNLPAALPLSRQFKIR-QLPA--GLPSDLLLNRPDIIAAEHNMKQANANIGAARAN 337 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL GS+ L N F + WSFG LPIFD G +N+ A+ + Q+ Sbjct: 338 FFPRISLTGSLGLGSPQLSNLFSSGSKSWSFGGSAGLPIFDWGSNSANLDAAKIAQQKTV 397 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS----LSMINYRQGRYSL 411 + ++ V +A +EV +AL + + + +A K+ + L + YR G S Sbjct: 398 VAYEAAVESAFREVSDALAA----RSALNAQYNANVTQSKAFADRLRLVRLRYRHGVSSS 453 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD+LD ER+ +L + L ++ DLY +G G Sbjct: 454 LDLLDAERSNYSASSNLLATELSLLENMADLYKVLGGG 491 >gi|221196518|ref|ZP_03569565.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221203187|ref|ZP_03576206.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221177121|gb|EEE09549.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221183072|gb|EEE15472.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 502 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 211/469 (44%), Gaps = 47/469 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------IDTLKWWESFNDTSLNKLVKIA 68 GCTVGP+Y +P + P + + + + +D WW +F D L+ L A Sbjct: 23 GCTVGPDYRRPAVDT-PAAWHVDPADAYWHPAAPARAPLDA-TWWTAFGDPQLDALEAEA 80 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI-------PNLKTNSTGQL 120 + N + R + AK + SV + +P+ S + RF N T + + Sbjct: 81 QRNNQNLKAVAARYDQAKATLASVASAQYPAVSLNASGQRFRISADRPQTNYATQNVSTV 140 Query: 121 DSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +D +++DLFG+ RR +E++ AN D A A++ + + L SY R Sbjct: 141 QNDIQIGASVSYELDLFGRVRRTVEAAEANTDQARDDFANARVVLSADLASSYFALRELD 200 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + + + L +K ++ + GA S L L++ A++ + + L + Sbjct: 201 AEIDVVQRSIALQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLARQRAQVET 260 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLA 286 I+TL+G PA F P +PIN GIP+DL+ RPD+ E+ +A Sbjct: 261 AIATLVGTPAPAFSL----------PPRVVPINAPALPTGIPSDLLERRPDVASAERAMA 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 + A+IGIA++ +P ++L+ I F G T WS G +F GK+++ Sbjct: 311 AANAQIGIARAAYFPRIALSPDIGWDA-TRFSGLFTVPALLWSIGASASESLFAGGKLRA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A++ +++TVL A +EV+NA+T ++ + AV+ ++ +SL+ Sbjct: 370 GVDFAQAGYVAAQANYRQTVLTAFEEVQNAVTGLSVLADAAQQASAAVDDARRLVSLAQD 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +D+L E+ E + Q A V L A+G G+N Sbjct: 430 RYAGGLAPFIDVLTAEQQLLTSERQAVQIQGQRAALVVFLAKALGGGWN 478 >gi|167576963|ref|ZP_02369837.1| RND efflux system, outer membrane protein [Burkholderia thailandensis TXDOH] Length = 511 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 116/457 (25%), Positives = 221/457 (48%), Gaps = 30/457 (6%) Query: 15 LAGC-TVGPEYT-KP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++GC ++ P+Y KP P P + N++ +D W F D L L++ Sbjct: 36 VSGCLSLAPDYARKPPPVPASYPAYPGDPAGANARTPGQLD---WRAYFVDPRLQALIET 92 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFI-PN---LKTNSTGQLDS 122 AL N + A+ R+ A+ RAD FP+ A+ ++ RF P L + G+L S Sbjct: 93 ALANNRDLRIASRRVEQARAAYGIRRADQFPTIAANAAYLRFREPGGLLLPSPIIGELYS 152 Query: 123 ------DWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W+ID +G+ R ++++ L ++ A +++I ++ +Y+ + ER++ Sbjct: 153 ASLSEVQWEIDFWGRVRSLKAAALDTFLASDASRRAVTISLIGQVADAYLSLCAYDERLA 212 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ + ++++ + ++ +GA SKL L + E ++ ++ L+++ + H + Sbjct: 213 LTNETIASRRESLRIFRRRYEEGAISKLDLTQSEILLQQAQTLGSQLQQARDVQQHALDL 272 Query: 236 LLGYPATEFLHYMQKQSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A+ + + P+L G+P++L+ NRPD+ E +L + A IG Sbjct: 273 LVGASASAAGQAPAPLDDASIAPDL----APGLPSELLANRPDVVAAEYQLRAAHANIGA 328 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P ++L SI N F T WSF P L +PIFD G+ SN++ A + Sbjct: 329 ARAAFFPRIALTSSIGTGSTELHNLFASGTTAWSFIPNLSVPIFDAGRNISNLKLANARR 388 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E +++T+ +A ++V +AL + + + V Q + + L+ + Y G Sbjct: 389 DEALAQYEKTIQSAFRDVADALAARHWLAEQVRIAQETLATQTERARLAKLRYDSGAARF 448 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L++LD +R + L +R L S V LY A+G Sbjct: 449 LEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALGG 485 >gi|83593387|ref|YP_427139.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] gi|83576301|gb|ABC22852.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] Length = 499 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 215/465 (46%), Gaps = 36/465 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVK 66 + LL GC+ P+Y +P P+ PT + G + + I TL W E F D +L +L+ Sbjct: 24 LALLGGCSFIPDYQRPAAPV-PTAWPDGPAYDQAQAGGETIATLGWREFFRDPALQRLIA 82 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLDS-- 122 AL+ N + A + +A+ RADL P+ ++H+ P T TG+ + Sbjct: 83 QALEHNRDLRSAALTVESARATYRIERADLLPTVNGGTDLTHQRTPRTATQ-TGKAQTTT 141 Query: 123 ---------DWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHF 170 ++ID FG+ R +E L+ +A + ++ +I+++ +YI Sbjct: 142 NYSANIGTTSYEIDFFGRIRSLEEEA--LEQYFATEEARRSVQIALIAEVANAYITLLAD 199 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + + L+ ++ L+ F +G ++L + + + +++ ++ + ++ Sbjct: 200 RTLLQLTEETLNTRIESFNLTQQSFDRGVGTRLDVTQAQTTVETARANRAIYTRYVAQDI 259 Query: 231 HNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + L+G A F PN + G+P+DL+ RPDI E KL + Sbjct: 260 NALRLLVGDQLDANLLAGTPPLDLGRFFPN----VPAGLPSDLLLRRPDILEAEHKLVAA 315 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P +SL G++ + F + WS GP L +P+FD + ++ + Sbjct: 316 NANIGAARAAFWPKISLTGNLGTASASLGDLFSSGSLAWSVGPSLSVPLFDFWRNEATLE 375 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ + +++++ A +EV +AL + + Q V ++S +LS Y Sbjct: 376 SAKVQREIAVAAYEKSIQTAFREVADALAAKGTLGDQLRAQQDLVAATQESYALSRNRYD 435 Query: 406 QGRYSLLDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSG 449 QG + L LD +R+ + DL S+ QL +Y+ LY +G G Sbjct: 436 QGIDNYLSTLDSQRSLYAAQQDLISVRANQL-TNYITLYKVLGGG 479 >gi|300697558|ref|YP_003748219.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia solanacearum CFBP2957] gi|299074282|emb|CBJ53828.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia solanacearum CFBP2957] Length = 526 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 108/465 (23%), Positives = 204/465 (43%), Gaps = 37/465 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTSLNKL 64 GC VGP++ P P + GN + D + WW F L++ Sbjct: 20 GCAVGPDFVAPKAPAVQAYLRGGNPEQTAVGDGVAQRFAAGPDVPANWWRMFGSPPLDRA 79 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------------ISHRFIPNL 112 + AL N T+ A + AA+ ++ + +P AS + P+L Sbjct: 80 MDAALAANPTLQAAQANLRAAQASLRAGAGVFYPQVAASAEGARQAVVPARLGQAGAPSL 139 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T + +DLFG RR +ES A ++ V A L + L+ + I + Sbjct: 140 FNLWTLNASVSYVLDLFGGNRRAVESLAAQAEAQRYTVAAAYLTLTGNLVNTAIARAGYD 199 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +I + H ++ L ++ ++++H + G + + + A++ ++E+ +P LE+ H Sbjct: 200 AQIDVTHTLVALVREQVDITHSQVEAGIVPHATELSVVAQLAALEASLPPLEQKRDQAEH 259 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIRYQEKKLADS 288 +TL+G YPA + S L +P ++ +P+ L+R RPD+ + +L + Sbjct: 260 LEATLMGQYPAQAEPVALALAS------LRLPADLPRLVPSALVRQRPDVLTAQARLHVA 313 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A++G+A + + PS++L + + F G WS G L P+F G + Sbjct: 314 SAEVGVATAAMLPSITLTAAYGRESNQVARLFGGQAGTWSVGANLLAPVFQGGSLYYRRE 373 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ Q +++ VL+A ++V +AL ++ D V A E + ++ +YR Sbjct: 374 AATAALQAAVADYRQVVLSAFEQVADALRALEHDAAQVDAQARAQEAARIALEELQADYR 433 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L +L + + + A+ Q + V L++A+G G+ Sbjct: 434 AGTASYLQVLSADTQYQQAALGYLQARTQRLQDTVALFLALGGGW 478 >gi|194471563|ref|ZP_03077547.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457927|gb|EDX46766.1| outer membrane efflux protein OprA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] Length = 485 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/467 (23%), Positives = 218/467 (46%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMP---LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F+ LAGCT+ P++ +P P + P ++ + + W + F+D L +L+ I Sbjct: 19 FVTTLAGCTMAPKHERPTSPTAVVYP--YATSTVSGAPDAADIGWRDFFHDPLLQELIAI 76 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD--- 121 AL+ N + +A + AA+ RA++ P+ + A + R +L +++ Sbjct: 77 ALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRY 136 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R Sbjct: 137 EMAGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRAD 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + + L K + L+ G ++L L E ++S E + + + Sbjct: 193 RELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDR 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + + LLG P T L ++ IP + G+P+DL+ RPDI E +L + Sbjct: 253 NALELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDICAAEYRLRGA 311 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ Sbjct: 312 NARIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADL 370 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA Q + ++ + A ++V + L V Q AVE + + L+ + + Sbjct: 371 DRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRF 430 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++G L +LD R + L + + ++LY A+G G+ Sbjct: 431 QEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|293605810|ref|ZP_06688183.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] gi|292815805|gb|EFF74913.1| outer membrane efflux protein OprM [Achromobacter piechaudii ATCC 43553] Length = 500 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 41/462 (8%) Query: 18 CTVGPEYTKPHMPLLPTQF-----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C++ P Y +PH P+ P QF S G + TL W D +L +LV ++L N Sbjct: 25 CSMAPVYQRPHAPI-PAQFPDATASAGGNAAQSAAATLDWQSFVTDEALRQLVALSLDNN 83 Query: 73 LTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLD--------- 121 + QA I AA+ RAD P + S + + +P N+TGQ Sbjct: 84 RDLRQAVLNIEAARAQYRIERADRLPGINAQGSGTRQRVPG-DLNTTGQSAVQSSYQAGI 142 Query: 122 --SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + +++DLFG+ R + ++ LA ++A+A ++++++++I +Y+ R+ Sbjct: 143 GLTSFEVDLFGRVRSLSDAALQTYLATEETAHA----TRISLVAEVIQAYLTRDSAMRRL 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + Q L + ++ L + G + L + + ++ + + R + + Sbjct: 199 QVTEQTLASREASLNLIVKRRQAGTATALDYQEALGLTEQARAERERMAREVRQAGNALG 258 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + Y+ Q P L I G P++L+ RPDI E +L A IG Sbjct: 259 LLVGV--DDLRPYLPSQLAA-SPVLLQDIAAGAPSELLERRPDILAAEHELRSRNASIGA 315 Query: 295 AKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L G S + + F G WSF P++ LPIF G+ +N+ A Sbjct: 316 ARAAFFPSITLTGLYGSSSADLSDLFGGGQRAWSFMPQITLPIFSGGRNVANLDLATVRK 375 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ T+ A +EV +AL + ++ + E +++M LS YR G S Sbjct: 376 DIAVAKYEATIQGAFREVADALAATETLQREEASRRALAESSRQAMLLSEARYRGGVDSH 435 Query: 412 LDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGY 450 L LD +R+ + +D+S +RQ+A L+ A+G G+ Sbjct: 436 LRYLDAQRSAFTDQLTYIDVST-QRQIA--LATLFKALGGGW 474 >gi|95928537|ref|ZP_01311284.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] gi|95135327|gb|EAT16979.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] Length = 500 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 124/484 (25%), Positives = 220/484 (45%), Gaps = 48/484 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP----LLPTQF---------SIGNSKNLINIDTLK- 51 A+ + ++ L GC VGP++ +P P PT ++G+ +N+I + L Sbjct: 6 ALIGMCLLTLTGCAVGPDFQRPAPPDVIGYTPTPLATSLNSSPTTLGDPQNIIKAERLTK 65 Query: 52 -WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASIS--- 105 WW + L+ L+ AL++N T++ A + A+E + + RA L+P ++ Sbjct: 66 HWWRAMGADKLDMLISEALERNPTLMAAEANLRQAQE-LYAARAGSTLYPQLEGNLGGQR 124 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDI 151 RF P + GQ + L+ G RR +E+ A D Q++ Sbjct: 125 QRFNPG----TLGQTGEAREFSLYNAGVGVRYTFDLAGGNRRALEALAARSDYQQFQLEG 180 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L +++ ++ + I K + I IL + +EL+ + G + L+ + Sbjct: 181 ARLTLVANIVTTAITQASLKRQTEIIENILKSQENQLELTRERIRLGHGEPDDALALQTQ 240 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ + +P L + N H ++ L+G P L + +F L + + IP++ Sbjct: 241 LEQTRAKLPPLRYQLQQNEHFLAVLVGKAPGESLLPSFTLE--DF--TLPPELPLLIPSE 296 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI E L S A+ G+A S LYP L+L+ GS ALT F G + WS Sbjct: 297 LVRARPDILGAEALLHASNAEYGVAISKLYPQLNLSADLGSQALTTGALFGGGSAVWSLV 356 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL A++ V + L ++ D K + L Sbjct: 357 GQLTQPLFNPG-LPAEKRAALAAFDAAAANYQSVVLEALRNVADVLRALENDSKRLEALS 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A KS+ + Y+ G S D+L ++ + E+DL+ + + + V A+G Sbjct: 416 VADSASGKSLESTQRRYKLGTVSYYDLLIAQQQRLQTELDLTKVQAKRLVNTVVFCQAMG 475 Query: 448 SGYN 451 G N Sbjct: 476 GGLN 479 >gi|91781150|ref|YP_556357.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91693810|gb|ABE37007.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 492 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 115/465 (24%), Positives = 223/465 (47%), Gaps = 36/465 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIA 68 + LA C++ P+Y P P+ ++G N D L WW +ND L+ L + Sbjct: 19 VCALAACSLAPDYHVPTAPVAAQYHTVGPWVNAQPADQLTRTDWWNIYNDPQLDDLEQRL 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-----------FIPNLKTNS 116 L N + + A + V ++LFP S +++ R P+ ++ Sbjct: 79 LANNTDLAASYAHYRQAMAFVDQVSSNLFPRISASAVPQRDRQSDTRPLRAGGPDYYNSA 138 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIA--KLNVISKLIPSYIDARHFKER 173 T + D+ +DL+G+ R +S A D A A Q D+A +L++ +L SYI R ++ Sbjct: 139 TLGGEIDYDLDLWGRVR--DSVAAGKDEAQATQADLASAQLSLQVQLADSYIRLRGLDQQ 196 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + Y + +EL+ G S L + + ++ S +S + + H I Sbjct: 197 TRLLTDTVAAYARALELTQTLHGGGIVSGLDVSRARTQLSSTKSQLSQNLAQRALIEHAI 256 Query: 234 STLLGYPATEFLHYMQKQSNNFQPN---LYIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A+EF + P + +P I +G+P+ L++ RPDI E+++A++ Sbjct: 257 AELIGASASEF---------SLAPKTALIALPVIPVGVPSTLLQRRPDIAAAERRVAEAN 307 Query: 290 AKIGIAKSDLYPS--LSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 AKIG+A++ +PS LSL G + + + N W+ GP+L +FD G ++ + Sbjct: 308 AKIGVARAAYFPSITLSLQGGVQSAAYAGLVSAPNIFWAIGPQLVQYVFDGGLRRAQLDS 367 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+++ E ++ VL+A +++E+ L+ + + + + + A + + ++ L++ YRQ Sbjct: 368 AKAATDEAGARYRGVVLSAFQQIEDNLSLLQDLGTALDQQRDADDSAQHAVDLALNRYRQ 427 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LD++ + A + + + +L + V L A+G G++ Sbjct: 428 GTVGYLDVVQAQTAALDAQRGVLDLQTRLLSANVQLVKALGGGWS 472 >gi|206564390|ref|YP_002235153.1| multidrug efflux system outer membrane protein OpcM [Burkholderia cenocepacia J2315] gi|198040430|emb|CAR56415.1| multidrug efflux system outer membrane protein OpcM [Burkholderia cenocepacia J2315] Length = 519 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 120/470 (25%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKP---------HMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P P L G K D +WW+ F D L+ L Sbjct: 38 VGPDYQRPDAAAPAAFKEAPTLAAGEQAGTWKTAEPSDGEHRGEWWKVFGDPVLDSLETQ 97 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ S R+ FP A S + +F P TN+ Sbjct: 98 ALAANQNLKAAAARVEEARAATRSARSQWFPQVGAGFGPTREGLSSASQFQPQGTGPTNA 157 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 158 TLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 217 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 218 DQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 277 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 278 LAILLGKAPADFA---------FKETPIVPVAVKIPPGLPSALLERRPDVSAAERAMAAA 328 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 329 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 388 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + + AV +++ +LS Sbjct: 389 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQEAAVNASRRAATLSR 448 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 449 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 498 >gi|34497083|ref|NP_901298.1| hypothetical protein CV_1628 [Chromobacterium violaceum ATCC 12472] gi|34102940|gb|AAQ59304.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 509 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 216/469 (46%), Gaps = 42/469 (8%) Query: 17 GCTVGPEYTKPHMP-----------LLPTQFS------IGNSKNLINIDTL--KWWESFN 57 GC VGP++ P +P L T S G + L+N L +WW F Sbjct: 40 GCAVGPDFKPPALPDAAKRGYAETPLAATTASDERAGPAGAGQRLVNGGDLPAQWWTLFR 99 Query: 58 DTSLNKLVKIALQQNLTI-------LQATERINAAKENIL--SVRADLFPSSYASISHRF 108 L++L++ AL N ++ QA E NAA ++L +V A L +I Sbjct: 100 SPELDQLIRAALAHNPSLEAAQAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGT 159 Query: 109 IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 P+ + ++ + +DLFG RR +E +A D Q + A +I+ ++ + + Sbjct: 160 APSEFNVYSATVNVSYTLDLFGGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQE 219 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + ++ ++L + + + + GA ++ + + + + + LEK+ Sbjct: 220 ASLRGQLQSTRELLKAQEAQLAIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALS 279 Query: 228 MNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKK 284 + ++TL G +P L + +S L +P + + +P+DL R RPDIR E Sbjct: 280 QTRNLLATLAGRFPGEGGLPEFRLES------LRLPDELPVSLPSDLARQRPDIRASEAL 333 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A +G+A ++ YP ++L+GS H N+ G NT WS L P+F+ G + Sbjct: 334 LHQASANVGVATANQYPQITLSGSYGTQHTVLPNTDLG-NTLWSVSGGLLQPLFNGGALS 392 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R AE++ ++ ++ TVL A ++V ++L +++ D + + A ++S+ + Sbjct: 393 AKRRAAEAAYRQAEAQYRTTVLKAFQDVADSLRAVDADARALQAQADAEAKARESLEVHT 452 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S L +LD +R+ + + L A+ L+ A+G G+ Sbjct: 453 RQYKLGGISYLSLLDAQRSYQQARIGLIQAQAARYSDSAALFAALGGGW 501 >gi|94314247|ref|YP_587456.1| heavy metal cation tricomponent efflux outer membrane porin ZneC [Cupriavidus metallidurans CH34] gi|93358099|gb|ABF12187.1| heavy metal cation tricomponent efflux outer membrane porin ZneC (CzcC-like) [Cupriavidus metallidurans CH34] Length = 511 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 116/481 (24%), Positives = 209/481 (43%), Gaps = 43/481 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTL--K 51 + +L + AGC VGP++ +P P LP + + G ++ + + Sbjct: 9 VATLLALATAGCAVGPDFQRPAAPETDRYTATTLPAETASASTPDGQAQRFAPGQDVPAQ 68 Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYAS------ 103 WW F + LN LV AL+ N L ++A R+ A+EN+ + R FPS AS Sbjct: 69 WWTMFGSSELNALVDAALRANPDLQAMEAALRV--AQENVAAQRGAFFPSVDASYTPSRQ 126 Query: 104 -ISHRFIPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 I+ L NS T QL + D+FG RR +ES +A D A Q A L Sbjct: 127 KIAQIIASPLSDNSDLFTLHTAQLSVSYVPDVFGGTRRQVESGVAQADVARFQWQAAYLT 186 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + S ++ + I + +I ++ L + +E + G + EA + Sbjct: 187 LTSNVVNAAIQEASLRAQIRATQDVIALSTRQLEAVRKQQRLGQVGAAEVAAQEATLAQA 246 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 E+ +P L++ + ++ L G ++ + Q F+ L +P + + +P+ L+ Sbjct: 247 EAALPPLDRQLAQQRNLLAALTGRLPSDAV----PQQFEFE-ALTLPGTLPLSLPSRLVG 301 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPDIR E ++ + A+IG+A + P+++L GS + + F W L Sbjct: 302 QRPDIRAAEAQMHAASAQIGVATAARLPNITLTAALGSSSQAIGDLFTAGTGFWGISAGL 361 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF G + R AE++ ++ ++ TVL A + V +AL +I D + + A Sbjct: 362 MQPIFKGGMLLHQQRAAEAAYKQASAQYRSTVLTAYQGVADALHAIEADARGLRTASDAE 421 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S +++ ++ G+ ++ E+ + + L A+ V L A+G + Sbjct: 422 RAAYRSFNIAQAQWKAGQIGYPAVMLAEQTYRQSAITLVQARASRYSDTVGLMQALGGSW 481 Query: 451 N 451 Sbjct: 482 E 482 >gi|126642347|ref|YP_001085331.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978] Length = 448 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 113/429 (26%), Positives = 202/429 (47%), Gaps = 39/429 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW +NDT LN+L + A+ N + I A++ + +A+ PS I F P Sbjct: 30 EWWRIYNDTQLNELEQQAIAGNQNLKAVAANIQASRALRSAAQAERLPS----IDAGFGP 85 Query: 111 NLKTNSTGQLDSD----------WK--------IDLFGQ-RRHIESSLANLDSAYAQVDI 151 + S L D W+ +DLFG+ + ++ A+L A Sbjct: 86 TRQKPSPASLGLDDNAHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQS 145 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A L + + + Y R +I ++ + L + +L L+F G S+L + + + E Sbjct: 146 ALLALQADVAQGYFLIRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLVSELDVSRAQTE 205 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ + ++ H ++ LLG P +F +Q + N I + G+P+ L Sbjct: 206 LATAQTTALNIARNRASAEHALAVLLGKPPADFNLAVQPLTAN-----SIRLPAGLPSTL 260 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----F 326 + RPDI E+ +A A+IGIA++ +P LSL G AL +++S WS Sbjct: 261 LERRPDIAAAERAMAADNARIGIARAAFFPKLSLTG--ALGYESSSLSELGKWSSRTFLL 318 Query: 327 GPK----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 GP L LP+FD G+ K+ + +A ++ +E +++TVLNA +EVEN L+ + Sbjct: 319 GPVAGTILSLPLFDGGQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQ 378 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + A+ + + LS + YR+G S LD++D +R + E + K + ++L Sbjct: 379 IQAQNQALSSSRHANQLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINL 438 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 439 IRALGGGWS 447 >gi|308274431|emb|CBX31030.1| Outer membrane protein oprM [uncultured Desulfobacterium sp.] Length = 519 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 119/464 (25%), Positives = 219/464 (47%), Gaps = 41/464 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLL---PTQFS-IGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +++GC++ P P P+ P ++ + K+ + T +W E F D + L+ A Sbjct: 60 TIISGCSLAPPNILPTPPIAKTYPAEYEPVMEGKSAV---TREWREFFTDPCIQDLISRA 116 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLDSDWK 125 L N ++ A +R+ A+ RADLFP+ A+ S R +L S ++ Sbjct: 117 LDNNRSLRIAIQRVAEARALYGIQRADLFPNIGAATSGQRGRTPADLSVTGEAVTASQYQ 176 Query: 126 ---------IDLFGQRRHIESSLANLDSAYAQVDIAK----LNVISKLIPSYIDARHFKE 172 +D +G+ R++ + S Y + AK L +I+++ +Y+ R F E Sbjct: 177 TTLNLLSFELDFWGRVRNLSDAAL---SGYLATEEAKRSFTLGLIAEVANTYLSEREFDE 233 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI++A + L + + ++ KF G TS+L + E + SD+ +L + R +HN Sbjct: 234 RIALAQKTLAGREDSYRIAKRKFEVGYTSELDARQAETLLTRARSDLASLSLA-RAQIHN 292 Query: 233 -ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+G L+ + ++ L I G+P+DL+ NRPD+ E +L + A Sbjct: 293 ALRVLVGTD----LNNLPSPASLSDQKLDFDIPAGLPSDLLINRPDVLAAENRLKAANAN 348 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ P + L G+ D F + W+F P + LP+FD G+ KS + A+ Sbjct: 349 IGAARAAFLPRIQLTGAFGTASAQLDGLFEAGSKTWNFLPVITLPLFDAGRNKSGLDIAQ 408 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE-LHKKSMSLSMIN--YR 405 + ++ T+ A +EV ++L + K+++ K+Q + L +S ++N Y Sbjct: 409 ARKNIAVADYELTLQQAFREVSDSLAA---RKQLMFKVQAQRDTLSAESARTRIVNLRYT 465 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++LD +R E + +R+ + + LY A+G G Sbjct: 466 NGAANYLELLDAQRDLFSAEQQMVQTQREQLTNAILLYKALGGG 509 >gi|167573977|ref|ZP_02366851.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 492 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 119/456 (26%), Positives = 218/456 (47%), Gaps = 23/456 (5%) Query: 15 LAGCT-VGPEYTKPHMPLLPTQFS-IGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQ 71 L CT VGP+Y +P P P+ ++ G+ L+ WW +F D L+KL+ A++ Sbjct: 24 LTACTAVGPDY-RPPRPSHPSDWTERGDGAVRAGPAQLQDWWRAFRDPLLDKLIAQAIEG 82 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------PNLKTNSTGQL-- 120 N + A +R+ A+ + + L P+ AS + + P + + T +L Sbjct: 83 NQDLAIARQRLLQARAERDQIASRLGPTVSASGTAEALRSSRALDWPPGIGQSRTYRLGF 142 Query: 121 DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++DLFG RR IES+ A +D+ ++++++L Y + R + R+ IA Sbjct: 143 DASWELDLFGGARRAIESADAQVDAIDEDRHAILVSLLAELASDYAELRASQARLQIATD 202 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + L+ +G + + + AE+K ++ +P L+ + H I L G Sbjct: 203 NVASLDATRRLTERSERRGLGTSFEVAQARAELKLAQAALPPLQANVARLTHAIGVLTGG 262 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E + +P+ + P+D+I RPD+R E++ A + A+IG+A++ Sbjct: 263 FPGELRDALSAPGATLPAAPRLPVTL--PSDMIGERPDVRAAERRFAAATAQIGVARAAQ 320 Query: 300 YP----SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P LSL + +L D F N WS + ++D G+ K+ + A ++A+ Sbjct: 321 FPHFAIPLSLGTTASLVQD-LFTSANVAWSVALEGTQTLYDGGRAKAGVSAARAAAEAAR 379 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I + + V A +EVE+ALT+I ++ L AV + + S + YR G L +L Sbjct: 380 IAYAQRVRVAFREVEDALTAIYAERDRQAALVAAVGSSQDAQSRATRLYRNGLNEYLSVL 439 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +RAT + L++++ + + LY A+G+G+ Sbjct: 440 IAQRATYRARDALALSRLARVQGVIALYKALGAGWR 475 >gi|167572873|ref|ZP_02365747.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 481 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 113/470 (24%), Positives = 209/470 (44%), Gaps = 48/470 (10%) Query: 17 GCTVGPEYTKPHMPL------------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ P S S N + W E F D L +L Sbjct: 3 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAASGARSANGQTAADIGWREFFVDPRLQRL 62 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ-- 119 + IAL+ N + + + A++ RA LFP+ + R+ + T TG+ Sbjct: 63 IDIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLDGTGTGAIQRYPSGVST--TGRPL 120 Query: 120 --------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 121 ISRAYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLALLST 180 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + L + + +L+ L+F G S+L L + + +++ ++ ++ V Sbjct: 181 DDLLQVTENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAV 240 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A Sbjct: 241 NALVLLVGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANA 297 Query: 291 KIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 298 NIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLA 357 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 358 HVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKNG 417 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 418 VDSYLSVL-------TAQTDLYSAQQQLISARLARWSNLVDLYRALGGGW 460 >gi|307293127|ref|ZP_07572973.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306881193|gb|EFN12409.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 467 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 110/462 (23%), Positives = 213/462 (46%), Gaps = 45/462 (9%) Query: 18 CTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C + P+Y +P +P+ ++ + + ++ DT W + F D L ++++ +L N Sbjct: 19 CDMAPKYVRPALPVPDAGPQGPAYAGADGQAIVPADT-AWKDFFVDPRLVRVIETSLANN 77 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNSTGQLD--------S 122 + A + A+ RAD+FP+ + F P + +G+ D S Sbjct: 78 RDLRAALANVEQARAQYRVRRADIFPTLGVNGGATFQDQPFAQQGVSGRTDIYSASVGVS 137 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFKERISIAHQ 179 W+IDLFG+ ++ + A + +A V+ A+ +++++ +++ +ER+ IA Sbjct: 138 AWEIDLFGRVGNL--TKAAQEQYFASVENRNAAQTALVAEVANAWLGMAADQERLKIARN 195 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 + + + ++L+ +F +G S+L + + + SDI + + ++ L G Sbjct: 196 LEGAFGQTLDLTRARFAKGIASELEVRQAQTSYDQARSDIAQATTLVAQDQNALNLLAGG 255 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAKIG 293 PA + M ++ + +PADL + RPDI E +L + A IG Sbjct: 256 TVPAEDLPTAMPEEDVTL---------VNLPADLPSTALLRRPDIMAAEHQLLAANADIG 306 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P +SL G+I+L N F + +WS P LPIFD G+ + N+R A ++ Sbjct: 307 AARAAFFPKISLTAAFGTISLGLSNLFKSGSDYWSVAPSANLPIFDFGRNRGNLRYARAT 366 Query: 351 AQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 T++++V +EV +AL ++ + T L+ + + + LS ++ G Sbjct: 367 YDAMVATYEKSVQTGFREVADALARRGTMTAQMEAQTSLRDSARVGYR---LSEARFKAG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L LD +R E L + A + V+LY A+G G Sbjct: 424 VDAFLTTLDAQRTLYGAEQSLLATRLARATNMVELYRAMGGG 465 >gi|254000371|ref|YP_003052434.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253987050|gb|ACT51907.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 467 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 112/467 (23%), Positives = 220/467 (47%), Gaps = 44/467 (9%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++LAGC + P+Y +P P+ P Q+ + K + W + F D L KL++ A Sbjct: 13 LMLAGCMNMQPKYERPAAPI-PAQWPATADAVQKQATAPAVVGWEQFFTDPDLKKLIRQA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------------ISHRFI 109 L+ N + +T I A+ RADLFP A+ ++H++ Sbjct: 72 LENNRDLRVSTLNIEKARAQYQIQRADLFPKINATGSGTNQRTPAAASTTGSTLLTHQYS 131 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 NL +S +++D FG+ R + + ++ S A++ +++++ +Y+ Sbjct: 132 ANLGFSS-------YELDFFGRVRSLRDQAVYQYLSTEEAKRSAQITLVAEVANAYLTMV 184 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E + +A Q L +++ +++ + G+ ++L+L + E ++S +D+ Sbjct: 185 ADMESLELARQTLRTQRESYDMTKRQLEFGSVTELTLRQAETSVESARADVAKYMTQVDQ 244 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + + L+G L M+ Q + G+P+ +++NRPD+ E+ L Sbjct: 245 DRNALVLLVGTAPEVNLDEMRSLKAVSQT---ATLPDGLPSTVLQNRPDVLEAERDLQGY 301 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P++SL S + + + F G N WSF P++ LPIF+ G K+N++ Sbjct: 302 NANIGAARAAFFPTISLTASAGVASNELGSLFNGSNRAWSFAPQIVLPIFNAGLNKANLK 361 Query: 346 RAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMI 402 AE + +++ + A KEV ++L ++ E T L +A E +S +LS + Sbjct: 362 VAEVNRDISVAQYEKAIQTAFKEVSDSLAQRATLEEQLSAQTALVNATE---RSFTLSRL 418 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +G + L +LD +R+ + +L + + V LY +G G Sbjct: 419 RFEKGLDNYLTVLDAQRSYYSAQQNLITVRLSDVSNQVTLYKVLGGG 465 >gi|163854843|ref|YP_001629141.1| putative outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163258571|emb|CAP40870.1| putative outer membrane efflux protein [Bordetella petrii] Length = 498 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 119/474 (25%), Positives = 222/474 (46%), Gaps = 52/474 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFN 57 L LL+ C VGP+Y +P + L G++ + K WW + Sbjct: 24 LCCALLSACAVGPDYQRPAIDL-------GDAYKEAQAEGWKPAQPRDAAERGAWWRVYG 76 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN 115 D +L+ L+ NL+I QA A+ + RA FP+ + A ++ + + Sbjct: 77 DATLDGLMAQLNAANLSIAQAEANYRQAQALVQGARAGFFPTVGADAGVTRAGGGSSASG 136 Query: 116 -------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 S G S W++DL+G+ RR +E+S A ++ + A+L+ S L Y Sbjct: 137 AGVSNQYSLGGTAS-WELDLWGRVRRDVEASRAEAQASLGDLANARLSAQSALAQDYFQL 195 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + + Y+++++L+ ++ G + + A+++S + + LE Sbjct: 196 RILDEQKRLLESTVQAYERSLQLTQNRYQAGVAGRGDVSVALAQLESARAQLVDLEWQRG 255 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 H I+ L+G + F Q + +P I G+P++L+ RPD+ E++ A Sbjct: 256 QFEHAIAVLVGLAPSRFALPPQPFAQA------VPQIPAGVPSELLERRPDVASAERRAA 309 Query: 287 DSVAKIGIAKSDLYPSL--SLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKI 340 + A+IG+A++ +P L S NG F + T WS GP L L +FD G Sbjct: 310 AANAQIGVAQAAWFPDLVLSANGGF---RSGEFAQWLTAPARFWSLGPALALTLFDGGAR 366 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMS 398 ++ + +A ++ Q +++TVL A++EVE+ L + E +++V + A++ ++S+ Sbjct: 367 QAQLDQARAAYDAQAALYRQTVLGALREVEDYLIQLRVLEQEQVVQR--RALDATRESLR 424 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G LD+ +E + E + +++ +LA S V L A+G G+ Sbjct: 425 LARNQYQAGLIGYLDVAVLETSALTSERNAITLVGNRLAAS-VQLIAALGGGWE 477 >gi|326315637|ref|YP_004233309.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372473|gb|ADX44742.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 468 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 119/459 (25%), Positives = 197/459 (42%), Gaps = 29/459 (6%) Query: 15 LAGCTVGPEYTKPHMP----LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LAGC V P+YT P P L ++ + D WW F L+ LV AL Sbjct: 18 LAGCAVEPDYTAPATPAPASLTRDALALPLQPGPVAQD---WWTVFGSAPLDALVAEALA 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-------------T 117 + T+ A + AA+EN+ + R +P AS ++ KT S T Sbjct: 75 HSPTVDAARATLRAAQENVAAQRGLFYPQVQASQNNTRQNTGKTQSSPLNSGDTVFNYHT 134 Query: 118 GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 QL + DLFG RR +ES A+ + Q++ A+L + S L+ + + E++ + Sbjct: 135 AQLSVAYTPDLFGGNRRQVESLQASAEQQRWQLEGARLTLASNLVGAVLQGAMLAEQVEL 194 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + ++ + + G S L + E + + +P L+K + ++ L Sbjct: 195 TDKAVAAMQEQLRVMRNLQRAGYASGLDVATQENLLGQAQQALPPLQKQLEQTRNLVAVL 254 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G L + + + P P+ +P+ L+ RPD+R E L + A IG+A+ Sbjct: 255 AGRTPDAVLP-LPRLAELAPP----PLPQAVPSQLVAQRPDVRAAESALHAASASIGVAE 309 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P LSL G A F N WS G L +PIFD G + + R AE+ Sbjct: 310 AARFPQLSLTAALGGGATDFGRMFSAGNAVWSLGAGLLMPIFDGGTLAARQRAAEAQFDA 369 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ VL A + V + L +++ D++ + +VE + L+ QG S Sbjct: 370 AAAQYRGAVLTAFQNVADTLYALSIDQRALQVANASVEATRSGYELTRSQLAQGYASRPS 429 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +L E+A + + + A L V LY A+G G P Sbjct: 430 LLAAEQAWRQAQAARAAAYGTLLGDSVALYQAVGGGVQP 468 >gi|304397156|ref|ZP_07379035.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] gi|304355305|gb|EFM19673.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] Length = 461 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 110/464 (23%), Positives = 219/464 (47%), Gaps = 31/464 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + S ++ L GC E +P+ P + NS +WW +F+D LN+LV Sbjct: 7 LVSALMLALTGCATQVEKAPSSLPI-PAAWR--NSVGPAAAPEAEWWRAFHDAYLNRLVT 63 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------- 119 AL+ N IL A R++ + + + + D FP+ A ++ L ++ TGQ Sbjct: 64 QALRNNPDILTARSRVDQYRAQLRATQGDEFPTLSAGVAATRERTL-SSVTGQPYETDVF 122 Query: 120 ---LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L +++++DL+G R + + +S A+L + A A+L + S + Y++ E++ Sbjct: 123 QGLLQANYEVDLWGARSNSVSASQASLAAQQAAASAAELTIASSVASGYLNLCALDEQLR 182 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L +++L+ +F G TS+L ++ +E +S ++ IP L+ + +S Sbjct: 183 VTEATLATRNNSLKLAQRQFESGYTSRLEWMQAASEYQSAKAQIPQLQHQIAQQENALSI 242 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G ++Q + P + +P++L+ RPDI +++L + A + + Sbjct: 243 LVGMNPRSIAR--RQQFDQILPQQMPSL---LPSELLNRRPDIVQAQRQLLAADASLASS 297 Query: 296 KSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 ++ L P L+L + L DN F WS G + P+ ++ + + + + Sbjct: 298 RAKLLPGLNLTATGTLQSSVLHQLADNPF----RLWSVGGSILAPLLNREALTAQVDVSM 353 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ + +++ V NA EV +AL +I + + + +LQ +++ ++ Y+ G Sbjct: 354 ATRNQALYGYEKVVRNAFSEVNDALDAIRQREAQLQELQKQETYVTEALRIARNRYQNGY 413 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S LD LD +R +++ K L + +DLY A+G G+ P Sbjct: 414 ASYLDELDAQRTLFSTQLNRVAVKNNLLLAQIDLYRALGGGWAP 457 >gi|254254281|ref|ZP_04947598.1| RND efflux system outer membrane lipoprotein [Burkholderia dolosa AUO158] gi|124898926|gb|EAY70769.1| RND efflux system outer membrane lipoprotein [Burkholderia dolosa AUO158] Length = 565 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 101/389 (25%), Positives = 182/389 (46%), Gaps = 44/389 (11%) Query: 20 VGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 VGP++++P TQ + D +W F D +L +L+ AL Sbjct: 21 VGPDFSRPETATAARFARDEHPATQRDASPPGASADADA-AFWRGFGDPALTRLIDAALA 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFI--------PNLKTN---ST 117 N + A R +A+ + D +P+ AS I H+ P + + S+ Sbjct: 80 ANQDLQLAVSRYDASNALLSQASFDRYPTITASGQIGHQLTSKDQAFGAPRSQRDTPVSS 139 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 +D+ W++DLFG+ RR IES A ++ A V ++ + +++ +Y+D R +ER+ I Sbjct: 140 VGIDAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAAEVASTYVDLRGSQERLRI 199 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + D ++ + L + G S+L + A+ +S S I E + ++ H ++ L Sbjct: 200 ARENADNQRQTLALIDARVAAGRGSELDAARARAQYESTTSRIAVYEAAIGVDEHRLAVL 259 Query: 237 LGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G + ++ P L ++ G P DL+R RPDI E +L + A++G+ Sbjct: 260 TGQTPDALIGRFDTRNAAPVPLPALAADVDPGTPGDLLRRRPDIAAAEARLHAATARVGV 319 Query: 295 AKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGPKLYLPIFDKGKIKSNI 344 A +DL+P +L+G + T F G +T+ WSF D G++++ I Sbjct: 320 ATADLFPRFTLSGLLGSATSSYGFFRAGSDTNLIALGIDWSF--------LDVGRVRARI 371 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENAL 373 +++ A + +++TVL A++E ENAL Sbjct: 372 AASDAQAAGELAQYRQTVLRALEETENAL 400 >gi|83747995|ref|ZP_00945025.1| Probable outer membrane drug efflux lipoprotein [Ralstonia solanacearum UW551] gi|207738675|ref|YP_002257068.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum IPO1609] gi|83725297|gb|EAP72445.1| Probable outer membrane drug efflux lipoprotein [Ralstonia solanacearum UW551] gi|206592043|emb|CAQ58949.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum IPO1609] Length = 483 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 215/459 (46%), Gaps = 30/459 (6%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC++ P Y +P M L T+ ++ WW+ F+D LN+L++ AL++N Sbjct: 21 GCSLAPPYERPAMELPAHWQTEAPWRAAQPADAAPKGPWWQRFDDPQLNRLMEQALRENQ 80 Query: 74 TILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPNLKTNST 117 ++ A + A+ RA L P A S S + ++ + Sbjct: 81 SLKVAVSNLEQAQALTRVARASLLPQVTAATNDTRLRTSADRPLSSYSTPTVSTVQNDFV 140 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + D ++ DLFG+ R +I ++ A+ A A ++ +L + +++ ++ R I + Sbjct: 141 VRADVSYEADLFGRVRSNIANATASEAQAAANLENFRLLLAAQVATTWYSLRETDAEIDV 200 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L L +K + + G S L L + +A + + + L+K H ++TL Sbjct: 201 VQQGLALQRKALAFVTSRHQDGVASGLDLAQQQALVDTTATQAELLQKQRTQYEHALATL 260 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA F ++ QP + I + +P+D+I RPD+ E+ A + A +G+A+ Sbjct: 261 VGTPAPAF--HLAPVPLAGQPPV---IPVALPSDVIERRPDVAAAERGAAAANASVGVAR 315 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+ L G + F + WSFG ++ +FD G+ ++ + A++ + Sbjct: 316 AAFFPSIMLGGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDAGRTRARVDFADAGYRG 375 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A++EVE+ L+ + + T+ + +VE +K ++ Y G + LD Sbjct: 376 AIANYRQTVLGALQEVEDGLSGLQALDRAATQARASVESARKVYDIASARYEGGLATSLD 435 Query: 414 ILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++A + + I +QL S V L A+G +N Sbjct: 436 VITAQQALLNNQRTAVQILGQQLTAS-VFLVKAVGGDWN 473 >gi|254251546|ref|ZP_04944864.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124894155|gb|EAY68035.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 508 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 211/457 (46%), Gaps = 33/457 (7%) Query: 22 PEYTKPHMPLLPTQFSIGN------------SKNLINIDTLKWWESFNDTSLNKLVKIAL 69 P YT+P P+ ++ G S N + W E F D L +L++IAL Sbjct: 24 PRYTRPDAPVA-QEYPAGGVYATQPGAAGARSANGQAATAIGWREFFVDPRLQRLIEIAL 82 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ-------- 119 + N + + I AA+ RA LFP+ + S S + +PN T G+ Sbjct: 83 KNNRDLRVSVLNIEAARAQYQITRAGLFPTLDATGSGSRQRLPNSLTAIPGRNITTTYNV 142 Query: 120 -LDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W++DLFG+ + + + +LA L +AYA+ A+++++S++ Y+ + + + Sbjct: 143 GLSASWELDLFGRVQSLKDQALAQYLSTAYAR-QAAEISLVSQVADQYLTLLSTDDLLKV 201 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L + + +L+ L+F G S+L L + + ++ ++ ++ ++ + L Sbjct: 202 TEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVEQALANQQAQARARAQALNALVLL 261 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + L NL + G+P+DL+ RPD+ E+ L + A IG A+ Sbjct: 262 IGEPLPDDLPPGMPLDAQ---NLLADVPAGLPSDLLTRRPDVMQAEQTLLAANANIGAAR 318 Query: 297 SDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P +SL G+ T F WSF P++ +PIF+ G+ +N+ A + Sbjct: 319 AAFFPRISLTGAFGTASPTLGGLFKAGTAAWSFAPQITMPIFEGGQNIANLNLANVQKRI 378 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A +EV + L + + + L+ ++ LS + Y+ G S L Sbjct: 379 EIANYEKAIQSAFREVADGLAARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVDSYLA 438 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L + + L A+ + VDLY A+G G+ Sbjct: 439 VLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 475 >gi|78062597|ref|YP_372505.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77970482|gb|ABB11861.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 496 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 109/478 (22%), Positives = 205/478 (42%), Gaps = 55/478 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------NIDTLK--------WWESFNDTS 60 GC VGP++ P P +++ G + T WW F Sbjct: 26 GCAVGPDFHAPDAPAT-QRYTRGEPPATTAATAGPTGDAQTFASAAHTPQHWWTQFGSEP 84 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHRF----------- 108 LN+LV A + T+ +A R++ A++N A + P+ AS+S Sbjct: 85 LNRLVDTAWHNSPTLAEARARLDEARQNHAAEAGATMLPNVDASLSATREQVDTTAFGLP 144 Query: 109 ----IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P T + + +D+FG RR +E+ A +D +D A+L + ++ + Sbjct: 145 ANVPSPGPFTLYDASVSVSYVLDVFGGNRRALEALRAQVDYQAFTLDAARLTLAGNVVAT 204 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I +++++ Q++D + + + +F G S+ + A + ++ +P LE Sbjct: 205 AILHASLAQQVALTRQLIDAQARQLRIVEARFAAGGVSQADVHAQRALLAQTQASLPPLE 264 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-------PINIGIPADLIRNRP 276 H ++ LLG P S+ P+L + + + +P+ L R RP Sbjct: 265 ARLAQAGHRLAILLGVP----------PSDAVLPDLTLDALVLPRTLPVALPSTLARERP 314 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLP 333 DIR E L + A +G+A ++LYP S++ I + G N W+ G L P Sbjct: 315 DIRAAEAVLHQASANVGVATANLYPRFSISAGIGSERTRIADLVSGLNV-WNVGLGLTQP 373 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F G++++ R AE++ + +++ETVL A+++V +A+ ++ D + A + Sbjct: 374 LFHGGELRAKKRAAEAAYDAAFASYRETVLEALQQVADAMRAVEHDAAALQARDTAAQEA 433 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S ++ Y G S D+LD +R T + +D + A+ L+ A+ + Sbjct: 434 AASNRIAGDRYAAGGISTFDLLDAQRQTLQTALDRTRAQADRLADTAALFQALAGSWT 491 >gi|161520859|ref|YP_001584286.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189352958|ref|YP_001948585.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160344909|gb|ABX17994.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189336980|dbj|BAG46049.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 502 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 212/469 (45%), Gaps = 47/469 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------IDTLKWWESFNDTSLNKLVKIA 68 GCTVGP+Y +P + P + + + + +D WW +F D L+ L A Sbjct: 23 GCTVGPDYRRPAVDT-PAAWHVDPADAYWHPAAPARAPLDA-TWWTAFGDPQLDALEAEA 80 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF-------IPNLKTNSTGQL 120 + N + R + AK + SV + +P+ S + RF N T + + Sbjct: 81 QRNNQNLKAVAARYDQAKATLASVASAQYPAVSLNASGQRFRISADRPQTNYATQNVSTV 140 Query: 121 DSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +D +++DLFG+ RR +E++ AN D A A++ + + L SY R Sbjct: 141 QNDIQVGASVSYELDLFGRVRRTVEAAEANTDQARDDFANARVVLSADLASSYFALRELD 200 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + + + L +K ++ + GA S L L++ A++ + + L + Sbjct: 201 AEIDVVQRSIALQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLVRQRAQVET 260 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLA 286 I+TL+G PA F P +PIN GIP+DL++ RPD+ E+ +A Sbjct: 261 AIATLVGTPAPAFSL----------PPRVVPINAPALPTGIPSDLLQRRPDVASAERAMA 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 + A+IGIA++ +P ++L+ I F G T WS G +F GK+++ Sbjct: 311 AANAQIGIARAAYFPRIALSPDIGWDA-TRFSGLFTVPALLWSIGASASESLFAGGKLQA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A++ +++TVL A +EV+NA+T ++ + AV+ ++ +SL+ Sbjct: 370 GVDFAQAGYVAAQANYRQTVLTAFEEVQNAVTGLSVLADAAQQASAAVDDARRLVSLAQD 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +D+L E+ E + Q A V L A+G G+N Sbjct: 430 RYAGGLAPFIDVLTAEQQLLTSERQAVQIQGQRAALVVFLAKALGGGWN 478 >gi|304396375|ref|ZP_07378256.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] gi|304355884|gb|EFM20250.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. aB] Length = 461 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 221/468 (47%), Gaps = 29/468 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTL---KWWESFNDT 59 ++ + ++LL GC+VGP+Y +P + + P + + +D +WW ++D Sbjct: 1 MKPLIPFVVMLLCGCSVGPDYQRPSVAM-PVHYKEARGWQPATPLDAQSKGEWWTVYHDA 59 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNLK 113 +L+ L+ N + + A+ RA LFPS S SH +++ Sbjct: 60 TLSGLLSQVSVSNQNVATYAAQYRQAQALAAESRAALFPSLDYDGSVTRSGSHATNSSVR 119 Query: 114 TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T S+ +L + W++DL+G+ RR +E + A+ ++ A++ L+ S+L Y R Sbjct: 120 TTSSSHQAELSASWELDLWGKLRRTLEENRASASASAAELANITLSAQSELAQDYFQLRI 179 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++I++ Q +D Y+ + + ++ G S+ +L + + + +S + + Sbjct: 180 MDQKIALYQQSVDAYQHYLNVIISQYQAGTASRATLAQAQLQRESASASAQDYQWQRAQM 239 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 H I+ L+G +F S P +P I +P +L++ RPDI Y E+ +A Sbjct: 240 EHAIALLIGKAPADF-------SLPAAPLTATLPAIPAALPGELLQRRPDIAYAERNMAA 292 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG+A + YP L+L+ S ++ + F N WS GP L + D G + + Sbjct: 293 ANAAIGVAVAGYYPDLTLSASGGVSASVLHSLFSLPNRVWSLGPALSGTLLDAGATSAKV 352 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A +S T+++TVL A++EVE+ L +N + + Q A + + S ++ + Y Sbjct: 353 DQARASWDASVATYRQTVLTAMQEVEDKLVELNTLQGEIAAQQSATDAAQTSARVTRLQY 412 Query: 405 RQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 G LD+ E ++ + L++A Q S V L A+G G+ Sbjct: 413 EAGMIDYLDVATTENSSLSAQQSLLTLATTQWVSS-VALIAALGGGWQ 459 >gi|206562069|ref|YP_002232832.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198038109|emb|CAR54057.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 478 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 23/423 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW ++D L+ LV+ AL QN + A R+ A+ A P + A + Sbjct: 58 RWWRLYDDPVLDGLVRDALAQNRDLAAAVARVERARAVFDEAGAARLPDTTAGFGVDYGK 117 Query: 108 FIPNLKTNSTGQLDS------------DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 P+ + ++ W++DL+G+ RH ++++ A+ D+ A D ++ Sbjct: 118 HAPDQIVAAAKGTEARTRWGFAPSFSLSWEVDLWGRVRHLVDAARADADAVQAASDAMRV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ +Y + ERI +A Q + + + L+ + G S L + + A Sbjct: 178 VVAAETTAAYAQVCAYGERIDVAEQSVGIADRLAALTAKQRAHGLVSDLEVARSRAFADD 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +D+P L S R ++ ++ L G A L P L P +G A L+R Sbjct: 238 TRADLPALVGSRRAALYELAALTGR-APGALPDAAAHCRT-APVLARPFPVGDGASLLRR 295 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-----YNTHWSFGPK 329 RPD+R E++LA + A+IG+A ++LYPS+SL GS+ P Y W GP Sbjct: 296 RPDLRESERQLAAANARIGVATAELYPSISLGGSVNWLSTGGDPSTLGDKYAIAWGVGPL 355 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + + ++ + +A + + VL A+KE E AL + L+ A Sbjct: 356 ITWRFPNMAASRARLAQARADDTLARAQFDAQVLRALKETEQALARYGAAWRRRAALETA 415 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 H ++ L+ +NY G L +LD +R+ V+ L+ + +Q++ V ++ A+G G Sbjct: 416 RAEHARAYHLAELNYEAGALDFLGVLDAQRSLVAVDSALAESTQQVSLDQVAVFKALGGG 475 Query: 450 YNP 452 + P Sbjct: 476 WQP 478 >gi|221210151|ref|ZP_03583132.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221170839|gb|EEE03305.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 502 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 122/469 (26%), Positives = 212/469 (45%), Gaps = 47/469 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------IDTLKWWESFNDTSLNKLVKIA 68 GCTVGP+Y +P + P + + + + +D WW +F D L+ L A Sbjct: 23 GCTVGPDYRRPAVDT-PAAWHVDPADAYWHPAAPARAPLDA-TWWTAFGDPQLDALEAEA 80 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF-------IPNLKTNSTGQL 120 + N + R + AK + SV + +P+ S + RF N T + + Sbjct: 81 QRNNQNLKAVAARYDQAKATLASVASAQYPAVSLNASGQRFRISADRPQTNYATQNVSTV 140 Query: 121 DSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +D +++DLFG+ RR +E++ AN D A A++ + + L SY R Sbjct: 141 QNDIQVGASVSYELDLFGRVRRTVEAAEANTDQARDDFANARVVLSADLASSYFALRELD 200 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + + + L +K ++ + GA S L L++ A++ + + L + Sbjct: 201 AEIDVVQRSIALQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLVRQRAQVET 260 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLA 286 I+TL+G PA F P +PIN GIP+DL++ RPD+ E+ +A Sbjct: 261 AIATLVGTPAPAFSL----------PPRVVPINAPALPTGIPSDLLQRRPDVASAERAMA 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKS 342 + A+IGIA++ +P ++L+ I F G T WS G +F GK+++ Sbjct: 311 AANAQIGIARAAYFPRIALSPDIGWDA-TRFSGLFTVPALLWSIGASASESLFAGGKLQA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A++ +++TVL A +EV+NA+T ++ + AV+ ++ +SL+ Sbjct: 370 GVDFAQAGYVAAQANYRQTVLTAFEEVQNAVTGLSVLADAAQQASAAVDDARRLVSLAQD 429 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +D+L E+ E + Q A V L A+G G+N Sbjct: 430 RYAGGLAPFIDVLTAEQQLLTSERQAVQIQGQRAALVVFLAKALGGGWN 478 >gi|107025374|ref|YP_622885.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116693443|ref|YP_838976.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105894748|gb|ABF77912.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116651443|gb|ABK12083.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 513 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/470 (25%), Positives = 217/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKP---------HMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDAAAPAAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ S R+ FP A S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRSARSQWFPQVGAGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 212 DQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPIVPVAVKIPPGLPSALLERRPDVSAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|224588238|gb|ACN58862.1| outer membrane protein OprN precursor [uncultured bacterium BLR13] Length = 469 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 122/457 (26%), Positives = 219/457 (47%), Gaps = 27/457 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 ++L C+ P K P L + F+ S ++W +FND L+ LV+ AL+ N Sbjct: 16 LVLTACSSAPPVKK-FEPALDSGFANAPSVAAAGEPVGEFWRAFNDPLLDTLVQRALKAN 74 Query: 73 LTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPN----LKTNS--TGQLDSDW 124 I A + A+ A L PS A + PN ++TN+ + D W Sbjct: 75 TDIRGAAASLREARALNRYADAQLLPSIGLDAGAARIRAPNDVGVVQTNNNYSAGFDVAW 134 Query: 125 KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 + DLFG+ +++ AN+ + A V A+++V +++ +Y D R +E++ +A L+ Sbjct: 135 EADLFGRLGDARKAAQANVLAGAAGVRAAQVSVTAEVARNYFDLRGLQEQLRVAVASLET 194 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + +EL + G + L + A +KS ++IP LE + + ++ L G T Sbjct: 195 QQSALELVDARLDVGRGTALDSERARALVKSTAANIPALEAALIRTRYRLAVLCGLQPTA 254 Query: 244 FLHYMQKQSNNFQPNLYIP-------INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 + + QP +P +IG PA L+R RPDI+ E ++A + A++G+A+ Sbjct: 255 ----LDAELGPVQP---LPGLRAVRLSSIGSPASLLRRRPDIQLAEAQVAAAAAQVGVAR 307 Query: 297 SDLYPSLSLNGSIAL--THDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 S L+P LSL G++ +H G + ++ G +L + D G+I++ I A++ Sbjct: 308 SALFPVLSLGGTLGQNSSHFGDLGKGASYVYNLGAQLTWNLIDFGRIRAQISAADARNDA 367 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 I +++ VL A++E E AL S ++ L A + +++ ++ ++ G L Sbjct: 368 VVIGYEKAVLGALEETEGALASYTRTQRQTELLFEAAQSSEQAAVIARERFKVGSTDFLT 427 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER L+ A+ A S V +Y A+G G+ Sbjct: 428 VLDAERELLSARDRLAQAQAGAATSLVAVYKALGGGW 464 >gi|167911007|ref|ZP_02498098.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 112] Length = 420 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 1 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 60 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 61 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 120 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 121 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 180 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 181 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 236 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 237 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 296 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 297 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 356 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 357 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 410 >gi|170737280|ref|YP_001778540.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169819468|gb|ACA94050.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 513 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/470 (25%), Positives = 217/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKP---------HMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDAAAPVAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ S R+ FP A S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRSARSQWFPQVGAGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 212 DQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPIVPVAVKIPPGLPSALLERRPDVSAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|86750020|ref|YP_486516.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] gi|86573048|gb|ABD07605.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] Length = 482 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 215/474 (45%), Gaps = 48/474 (10%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLV 65 S F++ GC + + P + L P S +L +D L WW F L +L+ Sbjct: 18 SAFVLGAGGCILTKDLPDPALDLPPRY----KSASLNTVDAPPALDWWRGFRSAELTQLM 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLK 113 + A NL I AT RI A A L PS S +++S+ I + Sbjct: 74 EEAQTVNLDIAAATARILQADAQARITGAALLPSITGNGSGSQNKTSGSNVSNTTIAGRR 133 Query: 114 TNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDA--- 167 + + L + ++ID +G + H + A + + D + L ++ + +Y Sbjct: 134 YATYSASLSASYEIDFWG-KNHDAALAAEETATATRFDRDVVALTTMASVANAYFQVLAT 192 Query: 168 ----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 R +E I+ A +ILD K+ + G S L + + E+ + + + +P L+ Sbjct: 193 QDRLRTSRENIASAQRILDAIKQ-------RLAAGTGSDLDVAQQESVLANQRAAVPPLQ 245 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + N++ ++TL+ P E + + N P G+P++L+ RPDIR QE Sbjct: 246 LTLAQNINTLATLVSRPP-ESVKIVGGSLNRISSPRVTP---GLPSELLTQRPDIRRQEA 301 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 +LA + A +G A++ +PS+ L G + F T S L PIFD G+I Sbjct: 302 QLASATANVGSARAQFFPSIQLTGQGGYQSAVLASLFTPQATFSSLAAGLTQPIFDGGRI 361 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + N + +E T+++TV++A +V+NAL SI ++ + + + V +++ +L+ Sbjct: 362 QGNFDLTRAQQEELLQTYRKTVVSAFADVDNALESIKQNTERLRLQRQVVASSRRAFNLA 421 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 R G ++ +L+ + E ++ + QLA+ + V L+ A+G G+ P Sbjct: 422 EQQLRAGTADIVTVLNTQLTLFTAED--ALIQTQLARYLAIVSLFQALGGGWEP 473 >gi|110833824|ref|YP_692683.1| hypothetical protein ABO_0963 [Alcanivorax borkumensis SK2] gi|110646935|emb|CAL16411.1| putative membrane protein [Alcanivorax borkumensis SK2] Length = 474 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/450 (24%), Positives = 209/450 (46%), Gaps = 26/450 (5%) Query: 21 GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 P Y +P P+ P Q N + + W + L +L++ AL N + A Sbjct: 22 APSYQQPLSPV-PAQLGEANGNSASELTLPSWSSLYQSAELQQLIQSALDNNRDLRIAVL 80 Query: 81 RINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDSD----------WKIDL 128 + A + RADL+P S AS S + +P+ + + SD W++DL Sbjct: 81 DVAALRAQYQIQRADLYPNLSVDASGSRQRLPSDLSGTGHSTLSDQYGVQVGVTAWELDL 140 Query: 129 FGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FG+ R + ++SL L S AQ +L +++++ SY+ ++ ++I+ + + + Sbjct: 141 FGRVRSLKDASLEKYLASEEAQRST-QLALVAQVAQSYLTLVSDRQNLAISRETVVAQED 199 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 ++ L ++ G S+L + + + ++ +++ + E+ + + ++ L+G P Sbjct: 200 SLALIERRYESGLGSELDVRQAQIALQEARANLASFERQVDQDYNALAVLVGGPLPTL-- 257 Query: 247 YMQKQSN--NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 K N N L P+ G+P+ L+ RPD++ E +L + A IG A++ +PS+ Sbjct: 258 ---KSVNLDNDALALVAPVPQGLPSALLTQRPDVQQAEHQLRAANANIGAARAAFFPSIQ 314 Query: 305 LNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L G+ F + WSF P + LPIF G+ ++N+ AE + ++++ Sbjct: 315 LTGAYGTMSSELSGLFDSGSKAWSFIPSISLPIFSGGRNRANLDLAEVRQDQAVASYEKA 374 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + A +EV NAL + + + Q V ++S++LS Y QG L +LD +R Sbjct: 375 IQTAFQEVANALQARDTLARQQQAQQALVTATEQSLTLSQQRYEQGADDYLAVLDAQRTL 434 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L K Q + +LY A+G G++ Sbjct: 435 LSARQQLVTLKLQQLTNETELYRALGGGWD 464 >gi|319792179|ref|YP_004153819.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315594642|gb|ADU35708.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 479 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 30/428 (7%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L+GC + P Y P P+ P G +D + W + F D L ++++AL N Sbjct: 23 VLSGCINLAPAYETPASPV-PQALPSGGLATATPLD-VSWRDFFVDKQLQGVIELALANN 80 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDSDW----- 124 + A I A+ RA LFP+ A R +L T+ ++ S + Sbjct: 81 RDLRVAALNIERARAQYGIARAGLFPTVEAGAGGSRSRTPGSLSTSGEARISSQYSADLG 140 Query: 125 ----KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++DLFG+ R++ ES+L + ++++++ + +++ ++R+++A Sbjct: 141 MTAYELDLFGRVRNLSESALQSYFQTEETRRSTQISLVASVATAWLQLAADEQRLALARS 200 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L+ +K+ +L G+ S L+L + ++ +++ +D + + + ++ L+G Sbjct: 201 TLESQRKSYDLIQRSHALGSQSGLALAQSQSTVEAARADAAAFDSLVEQDRNALTLLVGT 260 Query: 240 -PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P E L + L +P G+ + +++ RPD+R E L S A IG A++ Sbjct: 261 TPPAELLPTT---ATTEAAQLLVP-PAGLSSSVLQQRPDVRAAEHALRASNADIGAARAA 316 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P ++L G+ + T F + WSF P + +PIFD G +SN++ AE+ + Q Sbjct: 317 FFPRIALTASAGTASSTLSGLFTSGSKAWSFAPSVSVPIFDGGANRSNLKVAEAQQKIQL 376 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLSMINYRQGRYSLL 412 T+++TV A +EV +AL E + + +L L +S LS +R G S L Sbjct: 377 ATYEKTVQTAFREVADALA---ERRTLAERLDAQRSLLGATSRSFELSQSLFRSGATSFL 433 Query: 413 DILDIERA 420 D+LD +RA Sbjct: 434 DVLDAQRA 441 >gi|86146049|ref|ZP_01064376.1| putative outer membrane protein [Vibrio sp. MED222] gi|85836254|gb|EAQ54385.1| putative outer membrane protein [Vibrio sp. MED222] Length = 502 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 121/477 (25%), Positives = 216/477 (45%), Gaps = 44/477 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +LL GC VGP+Y +P + T Q + N WW FND +LN+LV Sbjct: 16 LLLTGCAVGPDYEEPQTTMAETFLYSQADVNQDGVSQNEQHNHWWTQFNDPTLNQLVADV 75 Query: 69 LQQNLTILQATERINAA--------------------------KENILSVRADLFPSSYA 102 QN+ + A ERIN A EN S+ +F +S A Sbjct: 76 QSQNIPLKLAAERINMANSYKSVVESFKVPTINVGGGYYNYQLSEND-SLLGPVFGASDA 134 Query: 103 SISHRFIPNLKTNSTGQL---DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VI 157 S + L+ G W++DLFG R +S+ A + ++ + LN + Sbjct: 135 VESATGMSLLEAQHDGGFLGASIAWEMDLFG-RIDKQSNAATIRVEQTEIFQSGLNTLIT 193 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +I +Y+ R +ER IA + + K+ +EL G S+L L + +A + + ES Sbjct: 194 ADVIHNYLQYRGAQERKMIALENIADQKQTLELVTKVVRSGYGSELDLAQAKAMLAATES 253 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRP 276 +P LE + +++ ++ LLG T Q+ F P + I G+P+DL+ RP Sbjct: 254 IVPQLEIAEQVHKQRMAVLLGESLTSV---NQRLVGEFTLPRMNDVIPTGLPSDLLERRP 310 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLP 333 DIR E+++A ++G + ++ YP L G+ +T D+ F + W+ + Sbjct: 311 DIRIAEREMAAINEELGASIANRYPKFFLTGTPGVTAGSFDDLFSSDSFGWAASAGISWN 370 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+ ++ + E+ + + +Q +V +A EV+++L + ++ ++ A Sbjct: 371 VFDGGRGEAMVEMNEARFRSAALNYQHSVDSAFAEVDSSLFAYGRSQENQKRIDEATLAV 430 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S + Y+ G L +LD +R ++ AK Q A + + +Y A+G + Sbjct: 431 DNAVSKAKSLYKAGLVDYLSVLDAQRQQKAMQDRQVAAKLQTANTTIAVYKALGGDW 487 >gi|167615141|ref|ZP_02383776.1| RND efflux system, outer membrane protein [Burkholderia thailandensis Bt4] gi|257141709|ref|ZP_05589971.1| RND efflux system, outer membrane protein [Burkholderia thailandensis E264] Length = 511 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 222/457 (48%), Gaps = 30/457 (6%) Query: 15 LAGC-TVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++GC ++ P+Y + +P+ P + N++ +D W F D L L++ Sbjct: 36 VSGCLSLAPDYVRKPLPVPASYPAYPGDPAGANARTPGQLD---WRAYFVDPRLQALIET 92 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFI-PN---LKTNSTGQLDS 122 AL N + A+ R+ A+ RAD FP+ A+ ++ RF P L + G+L S Sbjct: 93 ALANNRDLRIASRRVEQARAAYGIRRADQFPTIAANAAYLRFREPGGLLLPSPIIGELYS 152 Query: 123 ------DWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W+ID +G+ R ++++ L ++ A +++I ++ +Y+ + ER++ Sbjct: 153 ASLSEVQWEIDFWGRVRSLKAAALDTFLASDASRRAVTISLIGQVADAYLSLCAYDERLA 212 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ + ++++ + ++ +GA SKL L + E ++ ++ L+++ + H + Sbjct: 213 LTNETIASRRESLRIFRRRYEEGAISKLDLTQSEILLQQAQTLGSQLQQARDVQQHALDL 272 Query: 236 LLGYPATEFLHYMQKQSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A+ + + P+L G+P++L+ +RPD+ E +L + A IG Sbjct: 273 LVGASASAAGQAPAPLDDASIAPDL----APGLPSELLASRPDVVAAEYQLRAAHANIGA 328 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P ++L SI N F T WSF P L +PIFD G+ SN++ A + Sbjct: 329 ARAAFFPRIALTSSIGTGSTELHNLFASGTTAWSFIPNLSVPIFDAGRNISNLKLANARR 388 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E +++T+ +A ++V +AL + + + V Q + + L+ + Y G Sbjct: 389 DEALAQYEKTIQSAFRDVADALAARHWLAEQVRIAQETLATQTERARLAKLRYDSGAARF 448 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L++LD +R + L +R L S V LY A+G Sbjct: 449 LEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALGG 485 >gi|167581940|ref|ZP_02374814.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 455 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/427 (23%), Positives = 202/427 (47%), Gaps = 18/427 (4%) Query: 39 GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 GN + + ++ W F D +L L+ AL N + AT RI A+ RAD P Sbjct: 22 GNVQEMRDVRLDDWRAYFTDPALRALIDAALANNRDLRIATLRIEEARGLYGVARADRLP 81 Query: 99 SSYASISHR----FIPNLKTNSTGQLD------SDWKIDLFGQRRHI-ESSLANLDSAYA 147 S S+ + + P L+ ++T L S ++IDLFG+ + + +++LA + Sbjct: 82 SIDGSLGYERTRLYDPVLRESATSSLYRASVGLSAFEIDLFGRVKSLSDAALAEYFATAE 141 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 A++++I+++ +Y+ R +++ +A + L L+ ++ G ++ + L Sbjct: 142 AQRAARISLIAEVASAYVSERALVDQLKLAERTLAARDATYALTQRRYAAGTSTAIELRT 201 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 E + S + LE+ + L G +F + + ++ G+ Sbjct: 202 AEMLVASARASKAALEREHTQAASALKLLAG----DFTAALPADAPALDELAVARVSPGL 257 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 +DL+ RPDIR E++L + A IG A++ +P ++L GS++ F ++ W Sbjct: 258 SSDLLEQRPDIRQAEQRLVAANANIGAARAAFFPRIALTTDIGSVSDAFSGLFSAGSSVW 317 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 +F P+L LPIF G+ ++N+ A++ +++T+ A +EV +AL + ++ + Sbjct: 318 TFAPRLTLPIFAGGRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLA 377 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 Q + + L+ Y G S L++LD +R+T + +L K+ + + LY Sbjct: 378 AQQAVYGADAERLRLAERRYGSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYR 437 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 438 ALGGGWS 444 >gi|254430010|ref|ZP_05043717.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] gi|196196179|gb|EDX91138.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alcanivorax sp. DG881] Length = 474 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 110/448 (24%), Positives = 210/448 (46%), Gaps = 26/448 (5%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P Y +P P+ P Q + + W + L +L++ AL N + A Sbjct: 23 PSYEQPASPV-PAQLGETTADGTAELTLPGWSTLYQSAELQQLIQSALDNNRDLRLAVLD 81 Query: 82 INAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDSD----------WKIDLF 129 + A + RADL+P S S + + +P +++ SD W++DLF Sbjct: 82 VAALRAQYQIQRADLYPNLSVDGSGTRQRLPGDLSSTGSSTLSDQYGVQVGVTAWELDLF 141 Query: 130 GQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 G+ R + ++SL L S AQ +L +++++ SY+ ++ ++I+ + + + + Sbjct: 142 GRVRSLKDASLETYLASEEAQRST-QLALVAQVAQSYLTLVSDRQNLAISRETVAAQENS 200 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--YPATEFL 245 + L +F G ++L + + + ++ ++ + E+ + + ++ L+G PA E + Sbjct: 201 LALIQRRFESGLGTELDVRQAQIALQGARANQASFERQVSQDYNALAVLVGGPLPALESV 260 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + N+ +L P+ G+ + L+ RPD++ E +L + A IG A++ +PS+ L Sbjct: 261 NL-----NSDTLSLVAPVPEGLSSSLLTQRPDVQQAEHQLRAANASIGAARAAFFPSIQL 315 Query: 306 NG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 G S++ F + WSF P + LPIF G+ K+N+ AE + T+++ + Sbjct: 316 TGAYGSMSSELSGLFDSGSKAWSFSPSISLPIFSGGRNKANLELAEVRQDQAVATYEKAI 375 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A +EV NAL + + + Q V ++S++LS Y QG L +LD +R Sbjct: 376 QTAFQEVANALQARDTLARQQQAQQALVTATEQSLTLSQQRYEQGADDYLAVLDAQRTLL 435 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L K Q + +LY A+G G+ Sbjct: 436 SARQQLVTLKLQQLTNETELYRALGGGW 463 >gi|330892595|gb|EGH25256.1| RND efflux transporter, outer membrane lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 432 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 122/438 (27%), Positives = 211/438 (48%), Gaps = 31/438 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P + +++ + WW+ F+D L KLV+ A + T+ A I+ A+ N+ SV Sbjct: 1 PASWEAPSARGQDSFGQAVWWKQFHDPVLVKLVEAAQSDSPTLASALASIDRARANLTSV 60 Query: 93 RADLFPSSYASIS------HRFIPNLKTNS--TGQLDSDWKIDLFGQ-RRHIESSLANLD 143 + PS AS S L+T++ + D+ W++D+FG+ RR+ E++ A L+ Sbjct: 61 NSGFGPSIDASASRTRSRQQAIGSQLETSTRRSAGFDALWELDMFGKTRRNAEAAQARLE 120 Query: 144 SAYAQVDIAKLNVISKLIPSYIDAR--------HFKERISIAHQILDLYKKNIELSHLKF 195 + A +++ +++ +Y+ R + +E IS + Q K ++ Sbjct: 121 ARMDDWHYAHISLSAEVADTYVQYRGCIQLRQAYEQEAISKS-QTAAATKSAVDAG---V 176 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 + A + L+ L + S++ E + + ++ L G + + Sbjct: 177 SSAADNALASASLANTLSSLDGQRVQCE----LLLISLVELTGMTKPRLRDLLGSADGSL 232 Query: 256 -QPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 QP L+ N+ +PA +R RPDI E++LA + A+IG+AK+DLYPSLSLNGSI+ + Sbjct: 233 PQPVLF---NVDSVPAQTLRQRPDIAALERELAATSAEIGVAKADLYPSLSLNGSISWSA 289 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 S G T WSFGP L +P+FD GK + + A +S Q WQ V +KEVENAL Sbjct: 290 SGSASGLKT-WSFGPSLSVPLFDTGKRLAELDSARASYQIAKAEWQNGVRAGVKEVENAL 348 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 +++ + + A ++ S ++R G SLL + + R+ E+ R Sbjct: 349 ANLHGAAQRTEQASIAALEYRSYFQSSEASWRAGSISLLTLEEARRSALSAEIQHIELVR 408 Query: 434 QLAKSYVDLYIAIGSGYN 451 + +V LY A+G ++ Sbjct: 409 DQVQYWVALYKAMGGSWD 426 >gi|237728432|ref|ZP_04558913.1| RND efflux system outer membrane lipoprotein [Citrobacter sp. 30_2] gi|226909910|gb|EEH95828.1| RND efflux system outer membrane lipoprotein [Citrobacter sp. 30_2] Length = 501 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/464 (23%), Positives = 217/464 (46%), Gaps = 34/464 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNS---------KNLINIDTLKWWESFNDTSLNKLVKI 67 GC++ P+Y +P P+ T + +G + + I + + W + F D L +L+ I Sbjct: 25 GCSMAPKYDRPAAPI-DTAYPLGAAYVEPAAATPDDAITAE-IGWRDFFRDPLLQQLIGI 82 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD--- 121 +L+ N + +A + AA+ RA++ P+ S S R +L T TGQ D Sbjct: 83 SLENNRDMRKAALNVEAAQALYRIQRAEMLPNLGVSARGASERVPADLST--TGQSDVLR 140 Query: 122 --------SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + A + IA +++++S++ +Y+ R +E Sbjct: 141 RYDVAGVTAAWELDLWGRIRSLSDRALASYLALDETRIATQMSLVSEVASAYLTLRADQE 200 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K++ L+ G +++L L + E +++ E++ + + + Sbjct: 201 LLRLTSDTLATQKRSYGLTTQLVEAGNSTQLDLRRAEIALRTAEANHAAYTRQAAKDRNA 260 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ P+ +P + G+P++L+ RPDIR E+ L + A Sbjct: 261 LVLLLGQPLTPELSRQLDEAMAL-PDDIVPTGLPSGLPSELLARRPDIRAAEQMLIGANA 319 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P++SL GS D F + WSF P++ LPIF G +++N+ A Sbjct: 320 NIGAARAAFFPTISLTGSAGTASASLDGLFDSGSRAWSFLPQITLPIFRGGALRANLDVA 379 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++++ A EV + L + + Q V +K+ L+ +++G Sbjct: 380 HVQKRIEIANYEKSIQAAFAEVADGLAGKRTLDEQIRAEQLLVAASQKAYELAEQRFQEG 439 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + L + + + LY A+G G+ Sbjct: 440 VDDNLTVLDAQRTHYGTQQTLVRTRLTRLNNLIHLYKALGGGWT 483 >gi|209515627|ref|ZP_03264491.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209503863|gb|EEA03855.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 516 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 124/462 (26%), Positives = 218/462 (47%), Gaps = 29/462 (6%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINI-------DTLKWWESFNDTSLNKL 64 V ++GC VGP++ +P +S S+++ + D +WW F+D +L +L Sbjct: 17 VCVSGCMRVGPDF-QPQHEAWSEHWS---SESITEVTQQGTQPDVRQWWLIFDDQNLERL 72 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQ 119 + A N + A R+ A+ + A +P S+ A S R + +G Sbjct: 73 IAAADANNGDLKIAGLRVLEARAQLGIALAGRYPQVQQASADALASARKRSDGANPRSGA 132 Query: 120 L-------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 W++D +G+ R IES+ A +A A D A + + +++ +Y R + Sbjct: 133 FVQYGAGFSVGWELDFWGRFSRAIESADAAFFAAQANRDDALVLLHAQVADTYFTLRVAQ 192 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+ IA + L K++ +++ F G + +L + + + S IP LE + H Sbjct: 193 ARLRIARENAQLQKRSYDIAQKLFKAGESDELDFQQAKTQYLGTLSSIPDLESQIVLARH 252 Query: 232 NISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 +S L+G P Q P + + +PADL+ RPD+R E ++A A Sbjct: 253 ALSVLIGRPPGPLPELDAQAGKEGLVPLVDHAVLQDVPADLLLRRPDVRAAEYQMASQSA 312 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+DLYPS+SL G++ T +S G + F GP + +FD G+I +N+R + Sbjct: 313 LIGVAKADLYPSVSLLGTLTWTA-SSLTGAPSTLLFAAGPSVTWNVFDYGRITNNVRVQD 371 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + QE + +Q TV A +E ++A T++ + T L A ++S++L+ YR+G Sbjct: 372 ARLQELTVAYQNTVREAAREADDAATALIAALQRDTILNDAQGAARRSLTLANTIYREGY 431 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +RA + + + S + LY A+G G+ Sbjct: 432 SDFQRVLDAQRALFAQQDAYVVNRSNAVGSVIALYKALGGGW 473 >gi|325927711|ref|ZP_08188939.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325541912|gb|EGD13426.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 473 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 103/407 (25%), Positives = 187/407 (45%), Gaps = 25/407 (6%) Query: 35 QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI------------ 82 Q I + + D WW+ FND L++ + AL QNL + QA R+ Sbjct: 10 QADIAQRQAAVPADLSTWWDGFNDPDLSRYINAALAQNLDLAQAGARVAQARAGLTAATA 69 Query: 83 -NAAKENILSVRADLFPSSYASISHRF--IPNLKTNST---GQLDSDWKIDLFGQ-RRHI 135 N+ + S + PN +++ L + W++DLFG RR Sbjct: 70 ALLPAGNVSGSATRAYQSLETPLGQVLNSTPNFDRHASVYEANLGASWELDLFGGLRRGR 129 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 +++LA+ + A +L V ++ YI R + R+ +A + + + + + L Sbjct: 130 QAALADYQATEAGAAATRLAVAAQTADIYISVRGLQARLDVAQRQVATQQGLVSMVTLLH 189 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 +G ++L L + + + ++ +P LE ++ + +LG P H + + Sbjct: 190 GKGLAAELQLQQAQGALAQAQAGVPGLEAGLVAAMNALDVMLGVPPGT--HRAELSATKP 247 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIAL 311 P + G P DL+R RPD+ E++LA S A+IG+A ++ YP SL+G + A+ Sbjct: 248 IPPAPQIADSGTPGDLLRRRPDLIVAERRLAASNARIGVAMAEYYPKFSLSGLLGSATAI 307 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + N F G S L +FD G+I + I +A+ EQ ++ VL A ++VEN Sbjct: 308 SGANLFTGDAAQSSGVLGLRWRLFDFGRINAQIAQAKGQQAEQLAAYRLAVLRATEDVEN 367 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 A T++ + ++ L V+ K+ S + Y +G SL+++L+ + Sbjct: 368 AFTALIKREQQAAVLTQGVDALGKARGASALAYEKGTVSLIEVLNAD 414 >gi|241766983|ref|ZP_04764777.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] gi|241362517|gb|EER58418.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] Length = 479 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 117/452 (25%), Positives = 213/452 (47%), Gaps = 23/452 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + LL+GC++ P Y +P P+ + + + L W + D L +LV +ALQ Sbjct: 27 MALLSGCSMIPPYERPEAPVAAQWPAAAATASAPAAADLPWQDFVGDARLQELVALALQN 86 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS--------- 122 N + A I A+ +AD P+ A+ + P N +G + S Sbjct: 87 NRDLRVAVASIEQARAQYQIRQADQVPTINAAATGNRQP--AANGSGGISSTYTAGLAMA 144 Query: 123 DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+ID FG+ + E++LA + + ++I+ ++ +++ + +E +++ + L Sbjct: 145 SWEIDFFGRVASLKEAALAQFLATQEARGAVQTSLIASVVSTWLSLQTNEELLALTQRTL 204 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ L+ L+F QG TS L L + E+ + S + ++ ++V+ ++ L+G P Sbjct: 205 ATRDDSLRLNRLRFDQGVTSALDLRQAESLTAAARSTLAQQQRLRALDVNALTLLVGQPL 264 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E L + + +P G+P+DL+ RPDIR E+ L + A IG A++ +P Sbjct: 265 PERLLPSPQGDDRAAALRDVPE--GMPSDLLERRPDIRQAEQLLIAANANIGAARAAFFP 322 Query: 302 SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 +SL S A T N+ G + W+ P+ LPIFD G+ ++ + A + Sbjct: 323 RISLTAS-AGTASNALSGLFKSGSWGWTLAPQAVLPIFDAGRNQAGLDSARAGRDLAVAQ 381 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A +EV +AL + V Q L+ + YR G S LD+LD Sbjct: 382 YEKAIQSAFREVADALAGRATLGEQVLAQQAQATAEADRFRLADLRYRNGVASYLDVLDA 441 Query: 418 ERATAKVEVDLSIAKRQLA--KSYVDLYIAIG 447 +RA + ++A+ QLA ++ V LY A G Sbjct: 442 QRALFATQQ--ALAQSQLAQRQNQVALYKARG 471 >gi|153806317|ref|ZP_01958985.1| hypothetical protein BACCAC_00576 [Bacteroides caccae ATCC 43185] gi|149130994|gb|EDM22200.1| hypothetical protein BACCAC_00576 [Bacteroides caccae ATCC 43185] Length = 465 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 200/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+SF D+ L+ L+ +A+ +N ++ A RI AA+ N+ + R + FPS Sbjct: 53 WWKSFGDSKLDSLIALAVDRNYSVAMAINRIAAARANLWAERGNFFPSIGLNAGWTRQET 112 Query: 103 SISHRFIPNLKTNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 S + IP + L W+ID+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSIPQTTEHYYDASLSMSWEIDVFGSIRKRVKAQKENFAASKEEYTGVMISMAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + ++ ++ ++++ +++ G +KL + + ++ + S ++ IP Sbjct: 173 ASAYINLRELQQELEVVNKNCASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITMLAVLLGMYPQDIRPVLEPVGT--LPDYMEPIGVGMPVDLLMRRPDVRS 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E+ + A +G +K+D P + L GS LT S + P + Sbjct: 291 AERSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----MYEISPSMSW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +F G++ + R A++ E + +TVL A++E +NA+ S K + L+ Sbjct: 346 TLFSGGQLVNATRLAKAQLDESINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGNSLLQLITLYKALGGGW 463 >gi|26990017|ref|NP_745442.1| outer membrane lipoprotein [Pseudomonas putida KT2440] gi|24984939|gb|AAN68906.1|AE016522_3 outer membrane lipoprotein [Pseudomonas putida KT2440] Length = 487 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 124/468 (26%), Positives = 222/468 (47%), Gaps = 37/468 (7%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVKIA 68 L AGC VGP+Y +P + L + +++ L DT WWE F D L++LV A Sbjct: 19 LTAGCMVGPDYKQPEVAL--ADHYVADAQPLTASDTSVGSLDVWWEGFGDPLLSRLVTEA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--GQL------ 120 L QNL + QA R+ A+ + S A L PS A I+ + + ++ T GQL Sbjct: 77 LGQNLQLAQAQARVAQARAALGSATAALVPS--AGINGQAARSRQSVETPLGQLLNSTPD 134 Query: 121 ------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + W+IDLFG RR ++++ ++ A +L V ++ Y Sbjct: 135 YDRYGNSYELNLQASWEIDLFGGLRRDRQAAVGEYQASEAGAIATRLAVAAQTADIYTTV 194 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R++IA + + + +L +G + + E E+ +E+ +P L Sbjct: 195 RGLQARLAIAQNQVKTQQDLLAKVNLLNRKGLAPDYEVRQTEGELSQVEATVPVLRAGLD 254 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ + +LG +T H Q + P + IG P+DL+R RPD+ E++L Sbjct: 255 AALNALDVMLG--STPGTHRAQMAIASSIPQVPAFAQIGKPSDLLRRRPDLIAAERRLMA 312 Query: 288 SVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A S+ YP S+ G S + + F G + L +FD +I + I Sbjct: 313 ANAMIGSAISEYYPKFSIGGLIGSASTSGGTFFTGDANQSAVLLGLRWRLFDFSRINAQI 372 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKKSMSLSMIN 403 +A+ E ++++VL A ++VE AL++ IN + + + V L + S S + Sbjct: 373 DQAKGREAEALAIYRQSVLEASEDVETALSALINRQAQAQSLKRGEVSLERARRS-SFVA 431 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G SL+D+L+ ++ + ++A+ + A++ + Y+A+G G++ Sbjct: 432 FQNGVASLIDVLNADQQLLRTSDFRAVAQTEAARAAIAAYLALGGGWS 479 >gi|330939233|gb|EGH42636.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 317 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 165/314 (52%), Gaps = 19/314 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I SL ++ LA C VGP+Y P + S + +D WW+ F D +LNKLV Sbjct: 8 IPSLLVMALAACAVGPDYRAPVTAPAKLASAAQGSYDRSKVDR-AWWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYAS----------ISHRFIPNLKT 114 +L N + A R+ +A+ V D+ P +S AS I+ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSDLYPSLSLNG 307 +A +DL+P +SL+G Sbjct: 302 VATADLFPRVSLSG 315 >gi|291616035|ref|YP_003518777.1| OprM [Pantoea ananatis LMG 20103] gi|291151065|gb|ADD75649.1| OprM [Pantoea ananatis LMG 20103] Length = 461 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 21/458 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK--WWESFNDTSLNKL 64 ++ ++LL+GCTVGP+Y +P M + P + + G + D K WW + D +LN L Sbjct: 7 AVLVLLLSGCTVGPDYQRPLMAM-PVHYKEARGWQQATPQDDRHKGEWWSVYQDATLNSL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR------FIPNLKTNST 117 + N + + + A+ + RA LFP+ Y + + R ++ Sbjct: 66 LSQVSLSNQNVAEYAAQYRQAQALVAQSRAALFPTLDYDASTTRSGSHTDSTRTTSSSHQ 125 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ W++DL+G+ RR E A+ ++ A++ L+ ++L Y R E+I + Sbjct: 126 AALNASWELDLWGKLRRTREEDQASAQASAAELANITLSAQTELAEDYFQLRIMDEKIGL 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q + Y++ + + ++ G S+ ++ + + +++S + + H I+ L Sbjct: 186 YQQSITAYQRYLSVIQNQYQAGTESRATVAQAQQQLESASASAQDYQWQRAQMEHAIALL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G +F + I G+PA+L++ RPDI E+K+A + A IG+A Sbjct: 246 VGKAPADFSLPAATLTATLPA-----IPGGLPAELLQRRPDIAMAERKMAAANAAIGVAT 300 Query: 297 SDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YP L+L+ S ++ N F N WS GP+L + D G +++ +A ++ Sbjct: 301 AGYYPDLTLSASGGVSASALHNLFALPNRVWSLGPELSGSLLDFGATSASVDQARAAYDA 360 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A+++VE+ L +N + + Q A + S ++ Y G LD Sbjct: 361 SVANYRQTVLTAMQDVEDRLVELNTLQGEIAAQQRATAAAQTSAQVTRNQYEAGMIDYLD 420 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E ++ + L K S V L A+G G++ Sbjct: 421 VATTENSSLSAQQSLLTLKSTQWVSSVALIAALGGGWH 458 >gi|186477160|ref|YP_001858630.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184193619|gb|ACC71584.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 483 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 113/479 (23%), Positives = 221/479 (46%), Gaps = 53/479 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLL-------------PTQFSIGNSKNLINIDTL--KWWESFN 57 +LL+GCTVGP+Y P P P+ + G + + + +WW F+ Sbjct: 1 MLLSGCTVGPDYRTPAPPATQTYTPAPLPDETAPSPGATGVRQQFVTGQDIPAQWWTLFH 60 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASIS---HRF----- 108 L+ L++ AL + + A + A EN + V + L+PS A ++ +F Sbjct: 61 CEPLDALIREALANSPNVAAAQAALRQAAENYRAEVGSALYPSVDAKLNATREKFNGVTF 120 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 + NL S ++ + +D+FG RR +ES + +D Q+ A L + + + Sbjct: 121 GQPGLTEVLNLYNAS---VNVSYNLDVFGGSRRELESLRSQIDYQGYQLQAAYLALSANI 177 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + + +E+I +I +++ H +F G + +++ + + + +P Sbjct: 178 VTAAVKEASLREQIDATERIARDEASQLDVLHKQFDLGGVGRTAVLSQQTLLAQTRASLP 237 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IP--INIGIPADLIRNRPD 277 L +S H ++ L G P ++ F+ +++ +P + + +P+ L+R RPD Sbjct: 238 PLRQSLDQTRHQLAVLAGKPPSD------AGVPEFRLSMFTLPQSLPVSLPSSLVRQRPD 291 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 I + L + A++G+A +++YP ++L+ G ALT + WS G + PI Sbjct: 292 ILAADATLHQASAQVGVATANMYPQITLSASYGPQALTPAGLLKYADMIWSIGAGITQPI 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G++ + R AE++ + +++TVL A + V + L ++ D + A Sbjct: 352 FHGGQLSAQKRAAEAAFDQANAQYRQTVLLAFQNVADTLRALEHDATGLAAQTDAWRSAS 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 ++ L+ +R G S L +LD +R + V+L+ A+ A Y D L+ A+G G+ Sbjct: 412 DTLDLTRGQFRIGGVSYLALLDAQRQYQQTVVNLAQAQ---AARYADTAALFQALGGGW 467 >gi|299136241|ref|ZP_07029425.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298602365|gb|EFI58519.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 479 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLK--WWESFNDTSLNKLVKIAL 69 +GC VGP Y P MP P G++ N TL+ WW + D++LN + Sbjct: 19 SGCKVGPNYKAPAMPAPPAYSDNGHNGNWTTATPADGTLRGDWWTVYQDSTLNDFEQRCA 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT-NSTGQ------- 119 + N TI A A + + RA LFP S AS + I + K + G+ Sbjct: 79 KSNQTIEAALHSYEQAHDIVRENRAALFPTVSIGASATRNLISDTKPLHVPGEATNYWDF 138 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L W+ D +G RR IESS AN ++ A + +L++ L SY+ R + Sbjct: 139 LIPLSISWEPDFWGAIRRQIESSAANAQASAADLANTRLSLQGMLAVSYVQLRGVDLQAQ 198 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + LD +++ ++L+ + G S+ + + + +++ ++ + L H I+ Sbjct: 199 LLRSTLDSFQQTLQLTKDRLKGGLASQSDVEQAQTQLEQTQAQLIDLGVQRAQLEHAIAV 258 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G AT F H +K P+ + GIP++L++ RPDI E+ +A + A IG+A Sbjct: 259 LVGEAATNF-HIEEKPLAGDPPS----VPTGIPSELLQRRPDIASAERHVASANALIGVA 313 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ YPS+ L S + D +N+ W+ GP + I+D G+ K+ + A + Sbjct: 314 KAAYYPSIVLGASGGVETDKIGQLFNSSSAMWNAGPGINETIYDAGRRKAQVDFAIAQRA 373 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++E VL+A ++VE+ L+++ ++ T AV K+S LS + Y++G + L Sbjct: 374 QATALYREQVLSAFRDVEDQLSALRVLEQEATVTDRAVASAKRSTELSTMRYKRGLATYL 433 Query: 413 DIL---DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++L IE A + L + +R +A + L +A+G G++ Sbjct: 434 EVLTAQTIELANERTAASL-VTQRIVASA--QLQLALGGGWD 472 >gi|313672538|ref|YP_004050649.1| rnd efflux system, outer membrane lipoprotein, nodt family [Calditerrivibrio nitroreducens DSM 19672] gi|312939294|gb|ADR18486.1| RND efflux system, outer membrane lipoprotein, NodT family [Calditerrivibrio nitroreducens DSM 19672] Length = 473 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 225/476 (47%), Gaps = 54/476 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNK 63 LF+ L+ C+ PEYTKP +P+ P +F IN D LKW E F D L K Sbjct: 10 LFLFFLSSCSFIPEYTKPDLPI-PEKFPKDGVYTNINFDNSSEVYNLKWQEFFTDEKLKK 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIPNLKTNS 116 ++++ L+ N + A + +A+ RA+L+PS Y S +S F P K + Sbjct: 69 IIELGLKNNKDLKIAAFNLESARLMYGIKRAELYPSLYGSGGVSRSRVSDDFSPKGKGSP 128 Query: 117 TGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 Q ++W+ID FG+ R + ES+L ++ ++ +IS+L SYI Sbjct: 129 QDQYSVNFGLAEWEIDFFGRIRSLKESALEQFFASKENKRAVQIALISELSRSYITLAVD 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E SI ++ D+ +N ++ ++ G +++ L + + + +I+ + E+ ++ Sbjct: 189 RENYSITKKLYDIALENYKMVQSQYNVGLATEIDLNRAQIALDTIKVSLSNFEQIIELDK 248 Query: 231 HNISTLLGYPATEFLHYMQKQSNN----FQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + I+ L+G E L + NN F PNL + ++ NRPDI E +L Sbjct: 249 NAINYLVGDKVDESL--LPDGLNNIMIDFSPNL--------SSVVLLNRPDIMAAEHQLK 298 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFD----KGK 339 + A IG A++ ++P +SL + + F + W+ G + LP+FD +G Sbjct: 299 AANANIGAARAAIFPRISLLAGVGMASTELTRLFDSGSHTWNIGGNISLPLFDARVWQGY 358 Query: 340 IKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 S +++ E YI +++T+ A KEV + L + ++ + +K+ + Sbjct: 359 ELSKVQK------ELYIAQYEKTIQAAFKEVMDLLVVRGTIDSQIQAQKNLINSLEKNYT 412 Query: 399 LSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S Y QG S +L+ + + + ++L +AKR ++V LY A+G G N Sbjct: 413 ISKQLYNQGVESFFSVLEATKNLLQAKQALLNLELAKRV---NHVRLYSALGGGGN 465 >gi|167902762|ref|ZP_02489967.1| outer membrane efflux protein OprA [Burkholderia pseudomallei NCTC 13177] Length = 440 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 21 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 80 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 81 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 140 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 141 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 200 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 201 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 256 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 257 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 316 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 317 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 376 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 377 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 430 >gi|237745455|ref|ZP_04575935.1| outer membrane transporter [Oxalobacter formigenes HOxBLS] gi|229376806|gb|EEO26897.1| outer membrane transporter [Oxalobacter formigenes HOxBLS] Length = 484 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 123/465 (26%), Positives = 218/465 (46%), Gaps = 45/465 (9%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-IDTLKWWESFNDTSLNKLVKIALQQN 72 +L GC++ P Y +P P+ +Q+ S + + + W E F++ L L+ A++ N Sbjct: 14 ILGGCSMAPTYLRPDAPI-ESQYPDNTSSSATTPVPEIGWNEFFHEPRLRALIAAAIENN 72 Query: 73 LTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNST---------GQ 119 + A RI A+ AD P+ AS S R I L + G Sbjct: 73 RDLRIAALRIEEARALYNVQWADRLPTFQMEGDASRS-RTIGGLAPTESMLTQGNYRVGL 131 Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 S +++D FG+ + + +++LA + A ++++S++ +Y+ R ++I +A Sbjct: 132 GISAFELDFFGRVKSLTDAALAQYLATEEAQRSAYISLVSEVAKTYLTERAQSKQIELAR 191 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + YK + EL ++ GA+S L L + E ++S + TL++ + + L+G Sbjct: 192 QSYESYKHSYELMQKRYEVGASSALELRQYETLMQSALVSLSTLQRERAQTENALVVLIG 251 Query: 239 YPATEFLHYMQKQSNNFQP-------NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 KQ + P ++ I G+P+DL+ NRPDIR E+ L + A Sbjct: 252 ----------GKQIKDLPPPHDLSEDDIMQDIPAGLPSDLLTNRPDIRQYEQLLKSANAN 301 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P ++L G+ + + F W+F P+L LPIFD G+ +N+ AE Sbjct: 302 IGAARAAFFPRITLTAFAGTTSSSLSGLFEAGTGAWTFLPQLTLPIFDAGRNIANLDVAE 361 Query: 349 SSAQEQYITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAV-ELHKKSMSLSMINY 404 + +++T+ A +EV +ALT+ +NE K Q AV + + L+ Y Sbjct: 362 ARKNIAVAEYEKTIQVAFREVADALTARDWLNEQ----VKAQAAVLNSETERLKLAEARY 417 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S L++ D +R E L A+ + V+LY ++G G Sbjct: 418 NNGIASSLEVFDAQRQQFAAEQSLVDARLLRLVNAVELYRSLGGG 462 >gi|83716513|ref|YP_438640.1| RND efflux system, outer membrane protein [Burkholderia thailandensis E264] gi|83650338|gb|ABC34402.1| RND efflux system, outer membrane protein [Burkholderia thailandensis E264] Length = 509 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 113/454 (24%), Positives = 218/454 (48%), Gaps = 24/454 (5%) Query: 15 LAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++GC ++ P+Y + +P+ P N L W F D L L++ AL Sbjct: 34 VSGCLSLAPDYVRKPLPVPASYPAYPGDPAGANARTPGQLDWRAYFVDPRLQALIETALA 93 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISH-RFI-PN---LKTNSTGQLDS--- 122 N + A+ R+ A+ RAD FP+ A+ ++ RF P L + G+L S Sbjct: 94 NNRDLRIASRRVEQARAAYGIRRADQFPTIAANAAYLRFREPGGLLLPSPIIGELYSASL 153 Query: 123 ---DWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+ID +G+ R ++++ L ++ A +++I ++ +Y+ + ER+++ + Sbjct: 154 SEVQWEIDFWGRVRSLKAAALDTFLASDASRRAVTISLIGQVADAYLSLCAYDERLALTN 213 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + ++++ + ++ +GA SKL L + E ++ ++ L+++ + H + L+G Sbjct: 214 ETIASRRESLRIFRRRYEEGAISKLDLTQSEILLQQAQTLGSQLQQARDVQQHALDLLVG 273 Query: 239 YPATEFLHYMQKQSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 A+ + + P+L G+P++L+ +RPD+ E +L + A IG A++ Sbjct: 274 ASASAAGQAPAPLDDASIAPDL----APGLPSELLASRPDVVAAEYQLRAAHANIGAARA 329 Query: 298 DLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P ++L SI N F T WSF P L +PIFD G+ SN++ A + E Sbjct: 330 AFFPRIALTSSIGTGSTELHNLFASGTTAWSFIPNLSVPIFDAGRNISNLKLANARRDEA 389 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++T+ +A ++V +AL + + + V Q + + L+ + Y G L++ Sbjct: 390 LAQYEKTIQSAFRDVADALAARHWLAEQVRIAQETLATQTERARLAKLRYDSGAARFLEV 449 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 LD +R + L +R L S V LY A+G Sbjct: 450 LDAQRDLLNAQQQLVQTRRALLASRVALYAALGG 483 >gi|221215624|ref|ZP_03588586.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221164453|gb|EED96937.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 507 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 226/482 (46%), Gaps = 54/482 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLI--------NIDTLKWWESFND 58 +++LAGC++ P+Y P P T Q + + + + KWW F D Sbjct: 17 LLVLAGCSLAPKYDGPSTPTSSTFKETPQAPLRSEEAGTWKVAQPSEEVARGKWWTVFED 76 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFI 109 LN L + AL N + A R+ A+ + RA FP+ A S + F Sbjct: 77 PKLNDLEEQALSANQNLAAAAARVKEARAMNQAARAGFFPTLDAGFGPTRQKVSAASLFE 136 Query: 110 PN-----LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P+ +T Q +++DLFG+ +++S A++ + A +L + + + + Sbjct: 137 PDGTNVLQQTFWRAQAGVSYEVDLFGRVTSTVDASKADMQQSEALFHSVQLALQADVAQN 196 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R + +DL ++ ++L ++T+G ++L + + E+ + SD T++ Sbjct: 197 YFALRELDAESEVFASAVDLREQALKLVQRRYTEGEITELDVSRALTELATARSDAMTVQ 256 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQE 282 + + H+++ LLG EF ++ P L +P G+P+ L+ RPDI E Sbjct: 257 RLRATSEHSLAVLLGKAPVEF----SMAADPLNPVQLRVPP--GLPSSLLERRPDIAAAE 310 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGP----KLYLPIF 335 + +A + A+IG+AK+ +PSL+L G T N F + + GP L +PIF Sbjct: 311 RAMAAANARIGVAKAAFFPSLTLTGVGGFESATIGNLFKWSSRAFLLGPLAGTALNIPIF 370 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQ-HAVEL 392 D G K N+ A + +E +++ VL A +EVE+ L+ + ED+ TK Q AV Sbjct: 371 DGGLRKGNLANARAVYEEDVAKYRQQVLTAFREVEDNLSDMRILEDQ---TKTQAEAVTA 427 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ LS Y +G + LD++D ER+ + + V L + A + V+L A+G G Sbjct: 428 STRAAKLSRSQYTEGAVNYLDVIDAERSVLQSRRAAVQLQGVQ---AAATVNLIRALGGG 484 Query: 450 YN 451 + Sbjct: 485 WG 486 >gi|167919022|ref|ZP_02506113.1| outer membrane efflux protein OprA [Burkholderia pseudomallei BCC215] Length = 445 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 26 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 85 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 86 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 146 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 206 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 261 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 262 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 321 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 322 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 381 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 382 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 435 >gi|84616921|emb|CAJ13815.1| outer membrane protein [Desulfococcus multivorans] Length = 499 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 125/478 (26%), Positives = 219/478 (45%), Gaps = 42/478 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTLK-- 51 + + +LL GC VGP++ +P P L T F + G+ +N+I + L Sbjct: 6 LIGFYAILLTGCAVGPDFQRPVPPDVAGYTSTPLTTNFDVSPTMLGDPQNIIKGERLTKY 65 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFP---SSYASISH 106 WW + + L+ L+ AL++N T++ A + A+E + + RA L+P + Sbjct: 66 WWRAMSAEKLDILIGEALERNPTLMAAEATLRQAQE-LFAARAGSTLYPQIDGNLGGQRQ 124 Query: 107 RFIPNLKTNSTGQ----------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 RF P TG+ + + DL G RR +E+ A D Q++ A+L Sbjct: 125 RFNPG-TLGQTGEAREFSLYNAGIGVRYTFDLAGGNRRALEALAARSDYQQFQLEGARLT 183 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++ ++ + I K + I IL + +EL+ + G + L+ +++ Sbjct: 184 LVANIVTTAITQASLKRQTGIIENILKSQENQLELTRERIRLGHEEPDDALALQTQLEQT 243 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P L + N H ++ L+G P L + +F L + + IP++L+ Sbjct: 244 RAKLPPLRYQLQQNDHFLAVLVGKAPGESLLPSFTLE--DF--TLPPELPLLIPSELVHA 299 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDI E L S A+ G+A S LYP L+L+ GS ALT F G + WS +L Sbjct: 300 RPDILGAEALLHASNAEYGVAISKLYPQLNLSADLGSQALTTGALFGGGSAVWSLVGQLT 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F+ G + + R A ++ +Q VL A++ V + L ++ D K + L A Sbjct: 360 QPLFNSG-LPAEKRAALAAFDAAAANYQSVVLEALRNVADVLRALENDSKRLEALSAADF 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +KS+ + YR G S D+L ++ + E+DL+ + + + Y A+G G Sbjct: 419 ASEKSLESTQRRYRLGATSYYDLLIAQQQRLQTELDLTEGQAKRLVNTAAFYQAMGGG 476 >gi|296157260|ref|ZP_06840096.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295892596|gb|EFG72378.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 515 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 211/476 (44%), Gaps = 43/476 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN-----------------------SKNLINIDT 49 + AGCT+ P+Y +P P+ T F G + N Sbjct: 13 LFAAGCTMAPKYERPAAPVTAT-FPTGGVYDTQPGATQPGQQQPGTTGAARTANGQAAAD 71 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-- 107 + W + F D + +L++IAL+ N + + + A+ VRA L P+ A+ S Sbjct: 72 IGWRDFFVDPRMQRLIEIALKNNRDLRVSVLNMQASAAQFRIVRAGLLPTLDAAASQSKS 131 Query: 108 -------FIPNLKTNS-TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 F +NS + L++ W+ID FG+ + + + +LA + A++ ++S Sbjct: 132 RTPKDLSFFDQTISNSYSVGLNASWEIDFFGRIQSLKDQALAQYLATAQARKAAEITLVS 191 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ + + + L +++ ++ L+F G S+L L + + ++ ++ Sbjct: 192 QVANQYMTVLELDDLLKVTENTLKTSQESYRIAKLQFDNGTGSELDLRQSQTVVEQASAN 251 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ + + LLG P + L N NL I G+P+DL+ RPDI Sbjct: 252 LQQQQRLRAQADNALVLLLGEPLPDDLPPGMTLDNQ---NLLTDIPAGLPSDLLTRRPDI 308 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPI 334 E+ L + A IG A++ +P +SL GS T S G + WSF P + LPI Sbjct: 309 MEAEENLLAANANIGAARAAFFPKVSLTGSFG-TLSPSLGGLFKPGSAAWSFAPSITLPI 367 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + Q T+++ + A +EV + L + + + L+ + Sbjct: 368 FEGGQNLANLDLANIQKKVQIATYEKAIQTAFREVADGLAARGTYDQQIQALERNTFAEQ 427 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + LS + Y G S L +L + + L A+ + ++ V LY A+G G+ Sbjct: 428 RRLDLSNLRYTNGVDSYLSVLTAQTDLYSSQQLLVTARMERLQNLVTLYQALGGGW 483 >gi|167838731|ref|ZP_02465590.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 510 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 116/470 (24%), Positives = 215/470 (45%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D +L+ L + Sbjct: 32 VGPDYKRPDVATPAAFKEAPALSPGEQAGTWKAAEPADEAHRGEWWRVFGDPALDALEEQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLKTNSTG 118 AL N + A R+ A+ + R+ FP A S + +F P +T Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGAGFGPTREGLSSASQFQPQGSGPTTA 151 Query: 119 QL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L + ++L +F++G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVELRGEALKLVQRRFSEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADFA---------FKETPIVPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A++G+AKS +P L + GS A T N F + + GP L LPIFD G+ Sbjct: 323 NARVGLAKSAYFPKLDITGSFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|294651255|ref|ZP_06728582.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822850|gb|EFF81726.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 485 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 226/460 (49%), Gaps = 25/460 (5%) Query: 6 AIFSLFIVLLAGCTV-GPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSL 61 A+ +L + L A ++ GPE P++ T NS + +I + + F+D L Sbjct: 13 AVSALALALTACQSMRGPE------PVVKTDIPESYAYNSASGPSIAEQGYKQFFSDPRL 66 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTN---S 116 +++ +AL N + A I A++ + P+ AS S + P N S Sbjct: 67 IEVIDLALTNNRDLRTAALNIERAQQQYRITENNQLPTIGASGSAIRQVTPTRDPNNPYS 126 Query: 117 TGQLD---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q+ + +++D +G+ R + +++L N + + D ++++IS++ ++++ Sbjct: 127 TYQVGLGVTAYELDFWGRVRSLKDAALDNYLATQSARDSTQISLISQVTQAWLNYSFATA 186 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +A Q +++ L+ +F G S++ L + + +++ +D+ + + Sbjct: 187 NLKLAEQTFKAQQESYNLNKRRFDVGIDSEVPLRQAQISVETARNDVANYKTQIAQAANL 246 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L+G P + L +Q Q N++ G+P+DL+ NRPD++ E +L+ + A I Sbjct: 247 LNLLVGQPVPQNLLPVQPVKRVTQQNVFA---TGLPSDLLNNRPDVKAAEYQLSAAGANI 303 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G AK+ L+PS+SL G+ + F N+ WS GP L +PIFD G ++N++ +E+ Sbjct: 304 GAAKAQLFPSISLTGTAGYASTDLSDLFKSANSMWSIGPSLDMPIFDWGTRRANVKISET 363 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + ++++V +A +EV +AL + + + Q VE + LS +R G Sbjct: 364 DQKIALSNYEKSVQSAFREVNDALATRANIGERLAAQQRLVEATNTTYKLSNARFRAGID 423 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S L +LD +R+ E L + ++ + ++LY +G G Sbjct: 424 SYLTVLDAQRSAYAAEQGLLLLQQAEQNNQIELYKTLGGG 463 >gi|167815872|ref|ZP_02447552.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 91] gi|167894361|ref|ZP_02481763.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 7894] Length = 431 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 12 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 71 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 72 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 131 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 132 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 191 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 192 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 247 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 248 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 307 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 308 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 367 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 368 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 421 >gi|186472673|ref|YP_001860015.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184195005|gb|ACC72969.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 503 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 105/418 (25%), Positives = 200/418 (47%), Gaps = 36/418 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW+ F+D L+ L+ A+ N I RI+ A I +A P++ F Sbjct: 92 WWKGFHDPYLDDLIAKAIAGNFDIKVLAARIDVAGAQIGEAQAGALPTADLGAGANFQKV 151 Query: 112 LKTNSTGQLDS----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 T Q + +W ID++G+ + +++ A + A L ++S + +Y Sbjct: 152 TGQPFTKQYNVAAQVNWDIDIWGKVEKGVQAQKAEFHATEADWRAGYLELVSNVATTYFQ 211 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 F ++I +++D + + + G K +++ +AE+ + D+ L +S Sbjct: 212 ILQFDDQIVAQQKMVDENRTILSIYDGMSRNGLIPKTQVMRQQAEVNRLTKDLLDLRRSR 271 Query: 227 RMNVHNISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + TL+G PA EF + ++Q++ P+ G+P+ L+ RPDI E Sbjct: 272 SLANNALCTLIGVPAGEFTVPVGHLQQRVQ------LPPVPGGLPSQLLSRRPDIVASEL 325 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIK 341 ++ ++ +G AK P++SL G T + ++FG P L +P+ D G ++ Sbjct: 326 RVLEAYNLVGEAKLAQLPTISLTGHGG-TASFALSDLLKSFTFGFMPSLNIPLLDPG-VR 383 Query: 342 SNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++ E+ A++QY ++TV+ A +EVENAL +++ K Q VEL ++ Sbjct: 384 AHVKTTEAQTTVAEQQY---RQTVMGAFEEVENALVNLDSHK------QQRVELQQEVQR 434 Query: 399 LSMIN------YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS++N R+G S L++ + ER + ++DL +Q+ V LY A+G G+ Sbjct: 435 LSVVNEQMQSQLREGIVSQLEVFETERTLLQAQLDLLTNHQQILSDTVQLYKALGGGW 492 >gi|327396287|dbj|BAK13709.1| outer membrane protein OprM precursor [Pantoea ananatis AJ13355] Length = 461 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 21/458 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK--WWESFNDTSLNKL 64 ++ ++LL+GCTVGP+Y +P M + P + + G + D K WW + D +LN L Sbjct: 7 AVLVLLLSGCTVGPDYQRPLMAM-PVHYKEARGWQQAAPQDDRHKGEWWSVYQDATLNSL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR------FIPNLKTNST 117 + N + + + A+ + RA LFP+ Y + + R ++ Sbjct: 66 LSQVSLSNQNVAEYAAQYRQAQALVAQSRAALFPTLDYDASTTRSGSHTDSTRTTSSSHQ 125 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ W++DL+G+ RR E A+ ++ A++ L+ ++L Y R E+I + Sbjct: 126 AALNASWELDLWGKLRRTREEDQASAQASAAELANITLSAQTELAEDYFQLRIMDEKIGL 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q + Y++ + + ++ G S+ ++ + + +++S + + H I+ L Sbjct: 186 YQQSIAAYQRYLSVIQNQYQAGTESRATVAQAQQQLESASASAQDYQWQRAQMEHAIALL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G +F + I G+PA+L++ RPDI E+K+A + A IG+A Sbjct: 246 VGKAPADFSLPAATLTATLPA-----IPGGLPAELLQRRPDIAMAERKMAAANAAIGVAT 300 Query: 297 SDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YP L+L+ S ++ N F N WS GP+L + D G +++ +A ++ Sbjct: 301 AGYYPDLTLSASGGVSASALHNLFALPNRVWSLGPELSGSLLDFGATSASVDQARAAYDA 360 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A+++VE+ L +N + + Q A + S ++ Y G LD Sbjct: 361 SVANYRQTVLTAMQDVEDRLVELNTLQGEIAAQQRATAAAQTSAQVTRNQYEAGMIDYLD 420 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E ++ + L K S V L A+G G++ Sbjct: 421 VATTENSSLSAQQSLLTLKSTQWVSSVALIAALGGGWH 458 >gi|189220161|ref|YP_001940801.1| Outer membrane protein [Methylacidiphilum infernorum V4] gi|189187019|gb|ACD84204.1| Outer membrane protein [Methylacidiphilum infernorum V4] Length = 553 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 103/428 (24%), Positives = 216/428 (50%), Gaps = 64/428 (14%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P ++ + K+ + +WW+ FND L++L A N I A + A+ + + Sbjct: 77 PGKWKLAAPKDFVKKG--QWWKIFNDPVLDQLEAEAEVANQQIKMAMANVIEARAGVGAA 134 Query: 93 RADLFPSSYASISHR---------------------FIPNLKTNS----TGQ-------- 119 + FP + + S++ +P L N +G Sbjct: 135 LSAFFPHTNFTPSYQRWKLKTHLPWLPFILPEPIFSTVPLLGQNGIPIPSGSIIGSTQYY 194 Query: 120 ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 L+S+W++D++G+ RR +E++ A ++ A+++ KL + + + +Y Sbjct: 195 GFQPTLNMWQVYLNSNWELDIWGKLRRQLEAAKAEAQASQAELEGMKLTIHADVAQAYYL 254 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R+ ++ + +++ +Y+ N++ ++F G +++L L + + ++ I++ LE S Sbjct: 255 LRYIDSQLEVMERMIHVYEDNLKRVEIRFKSGLSNELDLARAKTDLSRIKAQYIALE-SH 313 Query: 227 RMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R V N I+ LLG PA+ F H+ +K P ++P + +P+D++ RPDI E+++ Sbjct: 314 RAKVENSIARLLGQPASTF-HFPRKPLKEDPP--HVPQS--LPSDILEQRPDIAQAEREM 368 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 A + A IG+A + +PS++LN + + F + W +GP + LPIF+ G++ + Sbjct: 369 AATNAMIGVAYAAYFPSVNLNAYFGFFNTDFGQLFTWPSNSWIYGPLIDLPIFEGGRLLA 428 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAVELHKKSMSL 399 N+ +A ++ ++ +++ET+L+A +EVENAL + E++K+ ++ V KK L Sbjct: 429 NLMQARAAYEKAVASYRETILSAFEEVENALIGMRLLEEEQKVEDEV---VASAKKQYDL 485 Query: 400 SMINYRQG 407 ++ +++G Sbjct: 486 ALDRFQRG 493 >gi|198274864|ref|ZP_03207396.1| hypothetical protein BACPLE_01023 [Bacteroides plebeius DSM 17135] gi|198272311|gb|EDY96580.1| hypothetical protein BACPLE_01023 [Bacteroides plebeius DSM 17135] Length = 457 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 116/463 (25%), Positives = 225/463 (48%), Gaps = 34/463 (7%) Query: 8 FSLFIVLLA----GCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSL 61 + LF+ L A GC + Y++P + + S + I + W E F D+ L Sbjct: 6 YYLFLFLAASILNGCGLYTRYSRPELDICTDSLYRSAVAQTDSSTIASKPWRELFTDSCL 65 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNST 117 L+ I LQ+N + A ++ A+ + + R PS SIS R+ K Sbjct: 66 QTLITIGLQRNTDLDIARLQVEEARAVLQNARLSYLPSISLTPQGSIS-RYNGETKNVYD 124 Query: 118 GQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + + W++D+FG+ + + ++LA+ + + A V + +++ + SY E++ I Sbjct: 125 LGITASWEMDIFGRMTNTKRAALASFEQSRAYVQAVQTQLVATIAESYYTLLMLDEQLDI 184 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +++ L + + I G ++ +++ + A ++E+ I T+ KS + +S L Sbjct: 185 SNETLANWTETIATLEALVQAGKSNDVAVHQARANRSALEASIQTIRKSISETENALSAL 244 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L PA H +++ + + Q + I++GIP L+ NRPD+R E LA++ A+ Sbjct: 245 LKEPA----HTIERGTLSSQ-HFSDDISVGIPLQLLSNRPDVRQAEAALAEAFYATNSAR 299 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYN-THW--SFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YPSL+L+G++ T++ + N W S L P+F+KG +N++ A++ QE Sbjct: 300 AAFYPSLTLSGTLGWTNNGNGVTVNPGKWLSSAIASLAAPLFNKGTNVANLKVAKARQQE 359 Query: 354 QYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +++++L+A EV NALT I DK+ + L+ A E K ++ Y Sbjct: 360 AVLQFEQSLLDAGNEVNNALTGWQTADRRIRFDKEQIADLEAATEKTKL-----LVRYTS 414 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y L++L +++ + L+ + + ++ + LY A+G G Sbjct: 415 STY--LEVLTAQQSLLDARLTLAQDRIEKIQAIISLYHALGGG 455 >gi|321159981|pdb|3PIK|A Chain A, Outer Membrane Protein Cusc Length = 446 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 120/449 (26%), Positives = 216/449 (48%), Gaps = 32/449 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQN 72 C++ P+Y +P MP+ P QFS+ S+N + N W F D + L+ AL N Sbjct: 1 CSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNN 57 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWK 125 + AT ++ A+ AD +P S + NLK N STG L++ + Sbjct: 58 RDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFD 116 Query: 126 IDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ IA + L Sbjct: 117 LDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRN 175 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 Y+++ + G+++ L+L + I+S SDI + + + LLG Sbjct: 176 YQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----S 231 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + Q Q+ N + + G+ + ++ RPDI E L + A IG A++ +PS+ Sbjct: 232 YGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSI 291 Query: 304 SLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ Sbjct: 292 SLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQ 351 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER- 419 + NA KEV +AL ++ Q + + ++ + Y+ G S L++LD ER Sbjct: 352 KIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERS 411 Query: 420 --ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AT + +DL+ A RQ+ + + LY A+ Sbjct: 412 LFATRQTLLDLNYA-RQVNE--ISLYTAL 437 >gi|11071585|emb|CAC14596.1| outer membrane protein [Stenotrophomonas maltophilia] Length = 466 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 222/468 (47%), Gaps = 39/468 (8%) Query: 9 SLFI-----VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSL 61 SLF+ + LAGC T+ P+ T P +P Q+ ++ + ++ + W + F D L Sbjct: 10 SLFLSIAATLALAGCSTLAPKNTA-VAPAIPAQWPAEAAQGEVADVAAVGWRDFFTDARL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIP 110 ++++ +LQ N + A + A+ RAD P + A ++ +F Sbjct: 69 QQVIEQSLQNNRDLRVAVLNVERARGQYRVQRADRVPGVAVTGQMDRRGTDAGVTEQF-- 126 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S G +++++DLFG+ R++ E++L + A A+L+++++ +++ Sbjct: 127 -----SAGVGVAEFELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGA 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +R+ IA L Y+ ++ L+ + +G +S L L + +++ +D L + Sbjct: 182 DAQRLKIADATLKTYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQD 241 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ L G L ++ +P L P G+P+D++ RPDI E +L Sbjct: 242 RNALALLAGGQLDPALL-----PDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLA 296 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +PS+SL GSI N F WSF PK+ LPIF GK+++N+ Sbjct: 297 ANANIGAARAAFFPSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANL 356 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMIN 403 A + +++++ +E +AL +++ D+++ ++ Q VE +++ LS Sbjct: 357 AIANADRDIALAQYEKSIQVGFRETADALALNVSLDEQVSSQ-QRLVEAAEQANRLSQAR 415 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S + +LD R + A+ + + LY +G G++ Sbjct: 416 YDAGLDSFVTLLDARRTAYNAQQTQLQAQLAQQANRITLYKVLGGGWH 463 >gi|194290056|ref|YP_002005963.1| outer membrane efflux protein (oep) [Cupriavidus taiwanensis LMG 19424] gi|193223891|emb|CAQ69900.1| Putative Outer membrane efflux protein (OEP) [Cupriavidus taiwanensis LMG 19424] Length = 513 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 218/468 (46%), Gaps = 22/468 (4%) Query: 4 LRAIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQF---SIGNSK-NLINIDTLKWWESFND 58 LRA+ + + GC +GP++ +P Q+ ++G + D +WW+ F D Sbjct: 8 LRALLAA-ACCVGGCARLGPDF-QPQQEPWTQQWHTPALGQATVQRAQPDLREWWQVFGD 65 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNS- 116 +L +L+ A N + A R+ A+ + R+ FP AS + ++ Sbjct: 66 PALERLIAEADAHNAGLKIAGLRVMEARAQLGIARSGRFPQLQQASADVLYTERRQSGGR 125 Query: 117 ----------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + D W++D +G+ R IES+ A +A A D + + +++ +Y Sbjct: 126 NPQNSRFWQYSAGFDIGWELDFWGRFSRAIESADAAYFAASANRDDVLVLLRAQVAETYF 185 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + R+ IA L ++++E++ F G T +L L + + + S IP E Sbjct: 186 ALRTAEARLGIARGNAALQRRSLEITERLFKSGETDELDLQQAKTQYLGTLSTIPEFESQ 245 Query: 226 FRMNVHNISTLLGYPATEFLHYMQ-KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + ++ L+G P + P + + +PA L++ RPDIR E + Sbjct: 246 ITRTRNALAVLIGRPPGALPDLPELAGKEGVIPLIDRAVLQDVPASLLQRRPDIRAAELQ 305 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSN 343 +A A IG+A++DLYPS++L GSI + N+ + GP L +FD G+IK+ Sbjct: 306 IAAQSALIGVAEADLYPSVTLLGSIVWSASTLAGTPNSLALAGGPALRWNVFDYGRIKNT 365 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R ++ Q+ + +Q+ V A +E ++A +++ + + L+ + ++S++L+ Sbjct: 366 VRVQDARLQQLIVAYQDAVRQAAREADDAASALIKALEREEILRDSALAAQRSLTLANAL 425 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G +LD +RA A + + + + +Y A+G G++ Sbjct: 426 YREGYSDFQRVLDSQRALAAQQDAYVVNRSNAVSDLIAVYKALGGGWS 473 >gi|148976117|ref|ZP_01812860.1| putative outer membrane protein [Vibrionales bacterium SWAT-3] gi|145964512|gb|EDK29766.1| putative outer membrane protein [Vibrionales bacterium SWAT-3] Length = 500 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 225/475 (47%), Gaps = 42/475 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL GC VGP+Y +P + T +S++ N WW FND +LN+LV Sbjct: 16 LLLTGCAVGPDYVEPQTTMAETFLYSQDSESHSETNQQENHWWTQFNDPTLNQLVSDVQS 75 Query: 71 QNLTILQATERINAA--------------------------KENILSVRADLFPSSYASI 104 QN+ + A ERIN A EN S+ +F +S A Sbjct: 76 QNIPLKLAAERINMANSYKSVVESFKVPTVNVGGGYYNYQLSEND-SLLGPVFGASDAVE 134 Query: 105 SHRFIPNLKTNSTGQL---DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VISK 159 S + L+ G W++DLFG R +++ A++ A++ + LN + + Sbjct: 135 SATGMSLLEAQHDGGFLGASIAWEMDLFG-RIDRQANAASIRVEQAKIFQSGLNTLITAD 193 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +I +Y+ R +ER +IA + + ++ +EL G S+L L + +A + + ES + Sbjct: 194 VIHNYLQYRGAQERKAIAMENIQDQQRTLELVTKVVRSGYGSELDLAQAQAMLAATESIV 253 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDI 278 P LE + +++ ++ LLG + Q+ + ++ P + I GIP+DL+ RPDI Sbjct: 254 PQLEIAEQVHKQRMAVLLG---ESLSNVNQRLAGDYTLPRMKDVIPTGIPSDLLEQRPDI 310 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++G + ++ YP L G+ +T D+ F + W+ + +F Sbjct: 311 RIAEREMAAINEELGASIANRYPKFFLTGTPGVTAGSFDDVFSSDSFGWAASAGISWNVF 370 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ ++ E++ + + +Q +V +A EV+++L + ++ ++ A Sbjct: 371 DGGRGEAMVQMNEATFRSAALNYQHSVDSAFAEVDSSLFAYGRSQENQKRIDEATRAVDN 430 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S + Y+ G L +LD +R ++ AK Q A + + +Y A+G + Sbjct: 431 AVSKAKSLYKAGLVDYLSVLDAQRQQKMMQDRQVAAKLQTANTTIAVYKALGGDW 485 >gi|170735177|ref|YP_001774291.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169821215|gb|ACA95796.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 508 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 111/467 (23%), Positives = 214/467 (45%), Gaps = 43/467 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWWESFNDTSLNKLV 65 GCT+ P Y +P P+ + G S N + W E F D L +L+ Sbjct: 21 GCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAAAAIGWREFFVDPRLQRLI 80 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--------------SYASISHRFIPN 111 +IAL+ N + + I AA+ RA LFP+ + + +I Sbjct: 81 EIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLGGMGTGNIQRYPQGVSPTNQAYIS- 139 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARH 169 +T + G L + W++DLFG+ + + + +LA L +AYA+ ++++++S++ Y+ Sbjct: 140 -RTYNVG-LSASWELDLFGRVQSLKDQALAQYLSTAYAR-QASEISLVSQVADQYLTLLS 196 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + +L+ L+F G S+L L + + +++ ++ ++ Sbjct: 197 TDDLLKVTEDTLKTAQASYDLTKLQFDNGTGSELELRQAQTVVETALANQQAQARARAQA 256 Query: 230 VHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + L+G P + L ++ Q NL + G+P+DL+ RPD+ E+ L Sbjct: 257 LNALVLLIGEPLPDDLPAGMPLEAQ------NLLTDVPAGLPSDLLTRRPDVMQAEQTLL 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P +SL G+ T F WSF P + LPIF+ G+ +N Sbjct: 311 AANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIAN 370 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A + + +++ + +A +EV + L + + + L+ ++ LS + Sbjct: 371 LDLANVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRFDLSDLR 430 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S L +L + + L A+ + VDLY A+G G+ Sbjct: 431 YKNGVDSYLSVLTAQTDLYSAQQSLISARLARWTNLVDLYRALGGGW 477 >gi|226951595|ref|ZP_03822059.1| AdeC-like outer membrane protein [Acinetobacter sp. ATCC 27244] gi|226837654|gb|EEH70037.1| AdeC-like outer membrane protein [Acinetobacter sp. ATCC 27244] Length = 485 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 112/458 (24%), Positives = 228/458 (49%), Gaps = 21/458 (4%) Query: 6 AIFSLFIVLLAGCTV-GPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 A+ +L + L A ++ GPE P + +P ++ NS + +I + + F+D L + Sbjct: 13 AVSALALALTACQSMRGPE---PVVKTDIPESYAY-NSASGSSIAEQGYKQFFSDPRLIE 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTN---STG 118 ++ +AL N + A I A++ + P+ AS S + P N ST Sbjct: 69 VIDLALTNNRDLRTAALNIERAQQQYRITENNQLPTIGASGSAIRQVTPTRDPNNPYSTY 128 Query: 119 QLD---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 Q+ + +++D +G+ R + +++L N + + D ++++IS++ ++++ + Sbjct: 129 QVGLGVTAYELDFWGRVRSLKDAALDNYLATQSARDSTQISLISQVTQAWLNYSFATANL 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A Q +++ L+ +F G S++ L + + +++ +D+ + + ++ Sbjct: 189 KLAEQTFKAQQESYNLNKRRFDVGIDSEVPLRQAQISVETARNDVANYKTQIAQAANLLN 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P + L +Q Q N++ G+P+DL+ NRPD++ E +L+ + A IG Sbjct: 249 LLVGQPVPQNLLPVQPVKRVTQQNVFA---TGLPSDLLNNRPDVKAAEYQLSAAGANIGA 305 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ L+PS+SL G+ + F N+ WS GP L +PIFD G ++N++ +E+ Sbjct: 306 AKAQLFPSISLTGTAGYASTDLSDLFKSANSMWSIGPSLDMPIFDWGTRRANVKISETDQ 365 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++++V +A +EV +AL + + + Q VE + LS +R G S Sbjct: 366 KIALSNYEKSVQSAFREVNDALATRANIGERLAAQQRLVEATNTTYKLSNARFRAGIDSY 425 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +LD +R+ E L + ++ + ++LY +G G Sbjct: 426 LTVLDAQRSAYAAEQGLLLLQQAEQNNQIELYKTLGGG 463 >gi|77457505|ref|YP_347010.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77381508|gb|ABA73021.1| outer membrane protein precursor [Pseudomonas fluorescens Pf0-1] Length = 486 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 219/460 (47%), Gaps = 28/460 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLVKIA 68 +L+GC++ P+Y +P P+ QF G + + W + F+D +L +L+++A Sbjct: 14 VLSGCSLIPDYQQPEAPV-AAQFPQGPAYSPAQAPAQAAAEQGWKQFFHDPALQQLIQVA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD----- 121 L+ N + A I+A RADLFP S+ AS S + +P + + TG+ Sbjct: 73 LENNRDLRVAALNIDAYAAQYRIQRADLFPAVSANASGSRQRVP-ARASQTGEAAISSSY 131 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R + E +L + ++++++ + +Y+ + KE + Sbjct: 132 SATVGISAYELDLFGRVRSLSEQALQQYFATEEARRSTQISLVASVANAYLTWQADKELL 191 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + L ++++ +L+ G S L L + +++ + + + + ++++ Sbjct: 192 KLTQDTLGAFEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLARYTRQVAQDENSLT 251 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG L + S++ L + G+P+DL++ RPDI E L + A IG Sbjct: 252 LLLGTGIPANLQAAKPLSDD----LLADVPAGLPSDLLQRRPDILQAEYNLKAANANIGA 307 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL GS++ F G + W F P++ LPIF+ G +++++ A+ Sbjct: 308 ARAAFFPSISLTANAGSLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASLDYAKIQK 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++++ A +EV + L + + + + V+ ++ L+ YR G S Sbjct: 368 DIGVANYEKSIQTAFQEVADGLAARQTYTEQLQAQRDFVQANQDYYRLAERRYRIGVDSN 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +R + L + S V+LY A+G G+N Sbjct: 428 LTFLDAQRQLFSAQQSLITDRLAQLTSAVNLYKALGGGWN 467 >gi|167824244|ref|ZP_02455715.1| outer membrane efflux protein OprA [Burkholderia pseudomallei 9] Length = 434 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 15 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 74 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 75 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 134 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 135 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 194 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 195 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 250 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 251 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 310 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 311 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 370 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 371 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 424 >gi|257142607|ref|ZP_05590869.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 547 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 113/471 (23%), Positives = 210/471 (44%), Gaps = 50/471 (10%) Query: 17 GCTVGPEYTKPHMPL---LPTQ------------FSIGNSKNLINIDTLKWWESFNDTSL 61 GCT+ P Y +P P+ PT N + ++I W E F D L Sbjct: 55 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDI---GWREFFVDPRL 111 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIP 110 +L++IAL+ N + + + A++ RA LFP+ + A +S P Sbjct: 112 QRLIEIALKNNRDLRVSVLNVEASRAQYRITRAGLFPTLDGTGTGTIQRTPAGVSVTGQP 171 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 172 LISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLS 231 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + I L + + +L+ L+F G S+L L + + +++ ++ ++ Sbjct: 232 TDDLLQITENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQA 291 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V+ + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + Sbjct: 292 VNALVLLIGEPLPDDLP--AGMPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAAN 348 Query: 290 AKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ Sbjct: 349 ANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDL 408 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + +++ + +A +EV + L + + + L+ ++ LS + Y+ Sbjct: 409 AHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKN 468 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 G S L +L + DL A++QL + VDLY A+G G+ Sbjct: 469 GVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 512 >gi|204927409|ref|ZP_03218611.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324074|gb|EDZ09269.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 485 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 217/465 (46%), Gaps = 30/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F+ LAGCT+ P++ +P P + ++ + + W + F++ L +L+ IAL Sbjct: 19 FVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAADIGWRDFFHNPLLQELIAIAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLD----- 121 + N + +A + AA+ A++ P+ + A + R +L +++ Sbjct: 79 RNNRDLRKAGLNVEAARALYRIQHAEMLPTLGIATAMDAGRTPADLSVTDEPEINRRYEM 138 Query: 122 ----SDWKIDLFGQRRHI-ESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKE 172 + W++DL+G+ R + + +LA AY +D A+++++S++ +++ R +E Sbjct: 139 AGATTAWELDLWGRVRSLSDQALA----AYMALDETYIAARMSLVSEVASAWLTLRADRE 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L K + L+ G ++L L E ++S E + + + + Sbjct: 195 LLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARDRNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + LLG P T L ++ IP + G+P+DL+ RPDIR E +L + A Sbjct: 255 LELLLGQPLTPELSRRLNEAVTLTEG-AIPTTLPGGLPSDLLVRRPDIRAAEYRLRGANA 313 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG A++ +P++SL G+ A T S G + W F P++ LP+F G +++++ R Sbjct: 314 RIGAARAAFFPTISLTGA-AGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLDR 372 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A Q + ++ + A ++V + L V Q AVE + + L+ + +++ Sbjct: 373 AHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQE 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L +LD R + L + + ++LY A+G G+ Sbjct: 433 GIDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477 >gi|167738646|ref|ZP_02411420.1| hypothetical protein Bpse14_11305 [Burkholderia pseudomallei 14] Length = 440 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 21 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 80 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 81 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 140 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 141 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 200 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 201 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 256 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 257 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 316 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 317 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQTVYGADAERL 376 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 377 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 430 >gi|330955166|gb|EGH55426.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 472 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 110/465 (23%), Positives = 222/465 (47%), Gaps = 31/465 (6%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNS-----KNLINIDTLKWWESFNDTSLNK 63 LF L L+GC++ P+Y +P P+ P + +S + D + W + F D +L + Sbjct: 9 LFAALSLSGCSLIPDYQRPAAPV-PAHYPQSSSYAPALSGPLAAD-MGWRDLFRDPTLQQ 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNL 112 L++ AL N + A + A + RADLFP+ ASI+ P Sbjct: 67 LIESALLNNRDLRVAALNVEAYQAQYRIQRADLFPAISATGSGTRQRQPASITQTGAPVT 126 Query: 113 KTNSTGQLD-SDWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + L S +++DLFG+ R + ++SL L S A+ +L++++ + +Y+ R Sbjct: 127 SGSYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEARRST-QLSLVASVATAYLTWRA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E +++ L Y+K+++L+ GA+S L L + ++S + + T ++ + Sbjct: 186 DQELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESARASLATFQRQVAQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++N++ L+G + + G+P+DL++ RPDI E +L + Sbjct: 246 LNNLTLLVGTTVAD-----TAPDRPLSSEWLAEVPAGLPSDLLQRRPDILEAEYQLQSAN 300 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +PS++L G+ + F W F P++ +PIF+ G +++++ Sbjct: 301 ASIGAARAAFFPSITLTANAGTSSTELSGLFKAGAGGWVFSPQIDIPIFNAGSLRASLDY 360 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ +++++ A +EV + L + K+ + V+ +++ L+ YR Sbjct: 361 SKIQKDISVSKYEKSIQTAFQEVSDGLAARQTYKRQLKAQSDLVQANQEYYRLAERRYRI 420 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L LD +R+ + +L + + V+LY A+G G+ Sbjct: 421 GVDNSLTFLDAQRSLFSAQQNLITDRLSQLTAEVNLYKALGGGWT 465 >gi|167845790|ref|ZP_02471298.1| outer membrane efflux protein OprA [Burkholderia pseudomallei B7210] Length = 437 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 18 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 77 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 78 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 137 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 138 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAEMLVASARASKA 197 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F+ + + ++ G+ +DL+ RPDIR Sbjct: 198 ALEREHTQAASALKLLAG----DFMTALPADAPALDALAVARVSPGLSSDLLEQRPDIRQ 253 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 254 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 313 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 314 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERL 373 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 374 RLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 427 >gi|296157027|ref|ZP_06839864.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295892913|gb|EFG72694.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 477 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 226/468 (48%), Gaps = 26/468 (5%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMP-----LLPTQFSIGNSKNLINIDTLKWWESFN 57 +L+ + S ++ LA C V P T +P + P +++ ++ ++ D WW F Sbjct: 5 LLKVLASAAMLTLAACAVQPA-THADLPQTVKTVAPAAWNVDAPQDSVSADA--WWARFG 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN-- 111 D +++LV+ L NL + A ER+ A++ RA L P S+ AS S + P Sbjct: 62 DPVMHQLVESVLTGNLDVQAAVERVKQAQDLATQNRAALLPELNASATASDSRQNAPPPL 121 Query: 112 --LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ G + + W D+FG +R + ++ A + ++ +L + + +YID R Sbjct: 122 GYVRQAGFG-VTASWTPDVFGGERLAVLAAQAQVSGRQTALNQVRLALAANTAAAYIDLR 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++ I + + + ++L+ + G +++L + + + +++ +++ IP ++ + + Sbjct: 181 WTQSQLQILNDNEQIRARALKLTQARLHYGLSTQLDVARAQNQLEDLQAQIPRVQSAVQH 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + I+ G + + + P +P + P+ + RPD+R + Sbjct: 241 QLSLIAVYSGRTPESVDSLLLANARDIPVPAQSVPQML--PSQALLQRPDVRTAYATVEQ 298 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSN 343 A++G++K+ YP LN + L +S+ G T +S PIF+ G+I +N Sbjct: 299 RAAEVGVSKAQRYPQFRLNLADGLLA-SSYLGLPTLTDNLFSAALNATSPIFNAGRITAN 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I +ES +E + Q+T+L A+KE+E+ + + V +L A++ ++ LS Sbjct: 358 IDASESRMRESQLGLQQTMLQALKEIEDNRSDLVSGAVQVQRLGGALDASDHALRLSTEL 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S LD+L + A + L+ AKR+ A S V LY ++G G++ Sbjct: 418 YKGGASSFLDVLAAQEAYLRDAESLNQAKREHALSAVALYRSLGGGWD 465 >gi|330818559|ref|YP_004362264.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] gi|327370952|gb|AEA62308.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] Length = 513 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 122/471 (25%), Positives = 224/471 (47%), Gaps = 47/471 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 + L+ C+ P Y P LPT F G + D ++ WW++F D +L+KL Sbjct: 13 VAFLSACSFAPVYHAPRT-ALPTTFKEAGGWQTAQPADRIERDGWWKAFRDPALDKLEIQ 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRFI----PNLKT 114 N + A R + A R+ LFP S+ AS + P++ Sbjct: 72 VAAANPDVAAAVARHDEASALFDQARSGLFPTLGLGAQISSNRASATRPLRGATQPDIYG 131 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +T D+ +DL+G+ R + + A+ +A + +L++ + L +Y + R ++ Sbjct: 132 ANTLDAGFDYDLDLWGKVRNEVAAGRADAQAAADDLASVRLSLQASLATAYFNLRGLDQQ 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +D Y++ ++L+ + G S L + + + ++ S + + + H I Sbjct: 192 QKLLADTIDTYQRALKLTLSRHAGGIASDLDVSRAQTQLDSARASAEDVRARRALYEHAI 251 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 +TL+G PA+ F + P+L Y+P I GIPA L++ RPD+ E+++A + Sbjct: 252 ATLVGVPASAF---------SLAPDLTVAYLPAIPAGIPATLLQRRPDVAAAERRMAAAN 302 Query: 290 AKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG+A++ +P ++L S L H S P N WS GP L L +FD G+ ++ Sbjct: 303 ARIGVARAAFFPDITLGLIGGYQSSGLGHWLSAP--NEIWSIGPSLALTLFDGGRRQAIT 360 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A + E ++ VL A ++VE+ L + + Q A++ ++++ LSM Y Sbjct: 361 DQARAKLAENGAQYRAVVLAACQQVEDNLALTHHLGDEADREQEALDAAERTLQLSMSRY 420 Query: 405 RQGRYSLLDILDIERATAKVEVDLSI----AKRQLAKSYVDLYIAIGSGYN 451 R G S LD++ + T ++ +++ +RQLA V L A+G G++ Sbjct: 421 RDGVVSYLDVVTAQ--TTELNTKITMLELDTRRQLAA--VGLIAALGGGWS 467 >gi|94495080|ref|ZP_01301661.1| type I secretion outer membrane protein [Sphingomonas sp. SKA58] gi|94425346|gb|EAT10366.1| type I secretion outer membrane protein [Sphingomonas sp. SKA58] Length = 466 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 222/458 (48%), Gaps = 27/458 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LAGC P + P P + G + N ID WWE+F+D L L+ Sbjct: 10 TLVIFALAGCM--PAHVPPPASAAITEPVAWRNGATGN-ATIDP-HWWEAFHDPKLTALI 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK----TNSTG--- 118 AL +N +L A R+ A+ +I R+ + P+ A + L T ST Sbjct: 66 DRALARNTDVLSAAARVQEARASIQLARSAVLPTLDAVAGGQRERTLSATGVTTSTALQP 125 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +W++DLFG+ R +++ ++ A D A L V +++ +YI ++ ++ Sbjct: 126 EAQLNWQVDLFGRLSRLTDAARLRYVASQADSDAAALTVSAEVAQAYIGLLALDAQLLVS 185 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + + + L+ + G TS+ L + E+E ++++ IP L + + + +S L Sbjct: 186 EQTVTSRAEALRLAADQARVGYTSQFELTQAESEYEAVQQSIPQLRLAIQAQENALSRLT 245 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + + +F +P + + +P+DL+R RPDI E +A + A + + Sbjct: 246 GDLPGAIVR--GRSLRDFS----LPEVPVTLPSDLLRRRPDIASAELTVAAADAALASDR 299 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYN--THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + P ++L+ ++ N+F Y+ T WS G + PIF G++ + + + + Sbjct: 300 AAFLPQVALSATLGQLFVNAF-DYDPITVWSVGGSVLAPIFAGGRLTAQVDATAAQRDQA 358 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ TVL A EVE A+T I + + ++++ + + + S++L+ Y+ G S L+ Sbjct: 359 AFAYRSTVLTAFAEVETAMTGITRYAEQIERIRNRLAILQSSVTLATDRYQGGYASYLEQ 418 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R E+D +S+ + QL ++ V LY A+G G+ Sbjct: 419 LDAQRNLYATELDAISVRQSQL-ENVVMLYRALGGGWQ 455 >gi|78061149|ref|YP_371057.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77969034|gb|ABB10413.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 511 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 51/472 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW++F D L+ L Sbjct: 32 VGPDYKRPDVSTPTAFKEAPTLAAGEQAGTWKTAEPSDGAHRGEWWKAFGDPVLDSLETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ S R+ FP A S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRSARSQWFPQIGAGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFGLRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPIVPVAVKVPPGLPSALLERRPDVSAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP----KLYLPIFDKGK 339 A+IG+AKS +P L + G A ++ S G WS GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITG--AFGYEASTLGSLFMWSSRTFLLGPFAGTALTLPLFDGGR 380 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +L Sbjct: 381 RAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAATL 440 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 441 SRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|152981451|ref|YP_001351740.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] gi|151281528|gb|ABR89938.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] Length = 484 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 133/485 (27%), Positives = 218/485 (44%), Gaps = 43/485 (8%) Query: 1 MNILRAIFSLFIVL-LAGC--TVGPEYTKPHMP-----LLPTQFSIGNSK--NLINIDTL 50 MN ++ + SL + LAGC T P+ P LP ++ + NL + TL Sbjct: 1 MNKIKLLASLGLPFWLAGCALTAPPDTVSVQPPNKWFAPLPATPAVATPEVENLPHHGTL 60 Query: 51 ----KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASI 104 KWWE ND L +L++ A + T+ A RI ++ +S A L P ASI Sbjct: 61 TDLSKWWEQQNDPLLVELIQSAQAVSPTVATAVSRIEQSRATSVSAGAALGPKLDVAASI 120 Query: 105 SHRFI-PNLKTNSTGQ--LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 P L +T Q L W+ID+FG R ++ A L A A A+++V +++ Sbjct: 121 QRNNTQPPLPLGTTSQIALQPSWEIDVFGANRATSRAAQARLQGAQANWHDARVSVAAEV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y R + + D + LS L G +A + + Sbjct: 181 ANRYYSLRTCNKLEIVTRADADSRAETARLSELSAKAG---------FQAPATAALARAS 231 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQS-------NNFQPNLYIPINI-GIPADLI 272 E + R + L A +L M + + ++ P +NI +PA + Sbjct: 232 AAEGNGRATQQSALCDLDVKALVYLTAMDEAALRRKMTESSAAPVAATVLNIDSLPAQTL 291 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGP- 328 RPD+ E+++A + A++G A++ YP LSL+GSI S G T WS GP Sbjct: 292 SQRPDVFIAEREVAAASAEVGNAQAQRYPRLSLSGSIGAGRFRSG-GTTTDMQTWSVGPL 350 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIFD G +N+ A++ +E + ++ +V A++EVE AL ++ + Sbjct: 351 SLSLPIFDGGTRAANVDAAKARYEEAVVAYRASVRQAVREVEEALVNLQSTASRSEDARI 410 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 AVE ++ S + + Y+ G SL+D+ D+ R E++ + +R+ +++ LY A G Sbjct: 411 AVEGYRASFNGTQSLYQNGLASLIDLEDLRRTRLAAELNATTLERERMSAWIALYRAAGG 470 Query: 449 GY-NP 452 G+ NP Sbjct: 471 GWVNP 475 >gi|311106677|ref|YP_003979530.1| efflux transporter outer membrane factor lipoprotein 5 [Achromobacter xylosoxidans A8] gi|310761366|gb|ADP16815.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 5 [Achromobacter xylosoxidans A8] Length = 493 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 110/472 (23%), Positives = 206/472 (43%), Gaps = 39/472 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--------WWESFNDTSL 61 + LLAGC VGP++ +P P + S S + L+ WW F +L Sbjct: 21 VLCALLAGCAVGPDFERPAPPQVDAYASPRASAPSADAQRLQAGADIPAQWWRLFRSEAL 80 Query: 62 NKLVKIALQQNLTILQATERINAAKENI---------------LSV-RADLFPSSYA-SI 104 ++LV+ ALQ + T+ QA R+ A E++ LSV R + PS++ + Sbjct: 81 DQLVRQALQASPTLEQARARLRQAGEDLNAETGGRMLPQVDGNLSVTRQKVDPSAFGVPV 140 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + + P N++ +D + +D+FG RR +E A +D ++ A++++ + ++ + Sbjct: 141 AEQPAPFTLYNAS--IDVSYTLDVFGGNRRALEGLGAQVDYQAHELQAARMSLAANVVTA 198 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I ER++ ++L + ++ + G S+ L E + + +P LE Sbjct: 199 AIRQADLDERLADTRELLAAQVRQQDIMRQRQQAGGISEADLRNQELLVAQTRATLPPLE 258 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 H ++ LG + + ++ L +P ++ G+P+ L R RPDI Sbjct: 259 YQLAQATHQLAAYLGLAPADLRSAPLRLAD-----LTLPADVPTGVPSALTRQRPDILAA 313 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKG 338 E + A +G+A ++ YP +L S G N WS G L P+F G Sbjct: 314 EALWHQASANVGVAVANQYPQFTLTASFGSQRTRVGDLSNGLNV-WSLGLGLVQPLFHGG 372 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++ R AE++ +++TVL ++V +AL ++ D A ++ Sbjct: 373 ELRARTRSAEAAYDAAAAGYRQTVLEGFRQVADALRAVQTDGDAYQASDEAWRRADQAER 432 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y+ G S L +LD +R + + + A L A+G G+ Sbjct: 433 IAQGRYQAGGISHLSLLDSQRQLLQTRIARTAADAARHADTAALLQALGGGW 484 >gi|282890810|ref|ZP_06299330.1| hypothetical protein pah_c026o159 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499403|gb|EFB41702.1| hypothetical protein pah_c026o159 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 392 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 172/339 (50%), Gaps = 22/339 (6%) Query: 124 WKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++D +G+ R + E LA ++ +A +++I ++ +Y+ R E +SIA Sbjct: 64 WELDFWGRLRSLKDAALEEYLATEEAEHATF----ISLIGQIANTYLMERELNELVSIAK 119 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + ++ +K+ L +F +G++SK ++ E ++ ++D+ LE+ +N + ++ L+G Sbjct: 120 KTVESRQKSYHLMKRRFEEGSSSKYEAIQAETLLQQAKADLTVLERRRELNWNAMTLLVG 179 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P T H + + F I G+P++L+ NRPD+ E +L + A IG A++ Sbjct: 180 TPITLDNHLLSQIEAYFIKE----ICPGLPSELLYNRPDVLAAEHRLMAAYANIGAARAA 235 Query: 299 LYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL G+ N F + W + P + +PIFD GK S++ A++ Sbjct: 236 FFPAISLTGAYGSASSELKNLFHPGSKFWFYFPSISVPIFDWGKNLSDLGLAKARQNIAV 295 Query: 356 ITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ T+ A +EV +ALT + E I T+ A+ ++ L+ I Y G L Sbjct: 296 SQYEHTIQVAFREVADALTERAWLAEQSVIQTE---ALASQRERARLAWIRYEHGTSPYL 352 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD ER E DL +R S ++L+IA+G GY+ Sbjct: 353 EFLDAERDRFSAEQDLVQTRRAFLASGINLFIALGGGYS 391 >gi|107028457|ref|YP_625552.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686452|ref|YP_839699.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105897621|gb|ABF80579.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652167|gb|ABK12806.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 464 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 111/447 (24%), Positives = 202/447 (45%), Gaps = 19/447 (4%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 CT P T PL T + + DT WW F+D L++LV AL NL + Sbjct: 19 CTSAPVATVTPPPLAATYANADLAAGGPAADTGAWWHGFHDPILDRLVDTALANNLDLQA 78 Query: 78 ATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTG-QLDSD--WK 125 A RI+AA+ + + FPS S S F + T L++ W+ Sbjct: 79 AVARIDAARAVRIGAASQWFPSVDLNAGASRQRLSASQAFPTDTPTTGNAFDLNASLAWE 138 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ID+FG+ R+ + ++ A++ SA ++ I + + +Y+ R ++R+++ Sbjct: 139 IDIFGRIRQGVSAADADIASAQNDAAAVRIATIDETVRTYVTVRGLEQRLALVEANALSQ 198 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + E + F G + + A+ ++ +++P L+ + +H +S + + Sbjct: 199 RGTEESTRRLFDAGVVPIADVDRAAAQTETTLAELPALQLQRQAAIHQLSIITASTPQDI 258 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + + P IG PADL+R RPD+R E ++ + A+IG+A++DL P L Sbjct: 259 YARLDPPAPEPVWTAAAP-GIGTPADLLRRRPDVRAAEARVVAAYARIGVAEADLKPHLQ 317 Query: 305 LNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L G I D F G + W G P+FD G+ +S + + A + ++ Sbjct: 318 LIGVIGAAIDG-FSGASLARSLAWMAGAGASAPLFDGGRRRSVVALRRAQADQALAAYRT 376 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 VL A+ +VE ++ + + +L+ AV + + + ++R G + +D L+++RA Sbjct: 377 AVLTAVGDVETSVAATARNHGRTERLERAVSNARGAYTQINRSWRSGESAFIDTLEVQRA 436 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 E L+ A+ + S V L A+G Sbjct: 437 LLAAEDSLARARTEETLSRVRLMSALG 463 >gi|238028496|ref|YP_002912727.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] gi|237877690|gb|ACR30023.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] Length = 505 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 209/472 (44%), Gaps = 30/472 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L+A GCT+ P Y +P P+ T S G S N + W Sbjct: 5 ALTAMAVALVATGCTLAPHYERPAAPVAGTFPSDGVYATQPGASATRSANGQAASDIGWR 64 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY-----------A 102 F D L +L+++AL+ N + + + AA+ RA+L P+ A Sbjct: 65 NFFTDPRLQRLIELALKNNRDLRVSVLNVEAARAQYQITRAELLPALNGTGTGSIQRLPA 124 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 +S P + L + W++DLFG+ + + + +LA S A+++++S++ Sbjct: 125 GVSTTGAPLISRTYNVGLSASWELDLFGRIQSLKDQALAKYLSTAQARKAAEISLVSQVA 184 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ + + + L + + L+ L+F G S+L L + + ++ ++ Sbjct: 185 DQYLTVLSTDDLLKVTEDTLKTAQASYNLTKLQFDNGTGSELDLRQAQTVVEQALANQQA 244 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ ++ + L+G P + L Q + +L I G+P++L+ RPDI Sbjct: 245 QARARAQALNALVVLVGEPLPDDLPAGQPLDSQ---DLLTDIPAGLPSELLTRRPDIMEA 301 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+ L + A IG A++ +P +SL G S + T WSF P L LPIF G Sbjct: 302 EQTLRAANANIGAARAAFFPRISLTGAFGSASPTLGGLLKAGTAAWSFAPDLTLPIFAGG 361 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ A + + +++ + A +EV + L + + + LQ + ++ Sbjct: 362 SNLANLDLARVQKRIEVANYEKAIQTAFQEVSDGLAARGTYDQQIAALQRNEQAQRRRYD 421 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G + L +L + + L A+ + VDLY A+G G+ Sbjct: 422 LSELRYKNGVDNYLTVLTAQTDLYSAQQSLISARLSRWTNLVDLYRALGGGW 473 >gi|329848903|ref|ZP_08263931.1| multidrug efflux system lipoprotein [Asticcacaulis biprosthecum C19] gi|328843966|gb|EGF93535.1| multidrug efflux system lipoprotein [Asticcacaulis biprosthecum C19] Length = 463 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 120/459 (26%), Positives = 208/459 (45%), Gaps = 34/459 (7%) Query: 17 GCTVGP-EYTKPHMPLLPTQFSIGNSKNLIN------IDTLKWWESFNDTSLNKLVKIAL 69 GC GP + + P T + N L I WW F D LN L+ A Sbjct: 15 GCATGPLQQAQVETPAAFT--GVDNGATLSAPVSSPAIGVGAWWLVFRDDVLNDLMARAS 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQL---DSD 123 + N I A R+ ++ + S R+ L+P +SYA+ SH +TG + Sbjct: 73 ESNHDIRIAAGRLEQSRALMGSARSGLWPQLGASYAA-SHGAEVGQSKPATGHAIGAELS 131 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DLFG+ R S A D+ ++ + +L + S++ +Y R E +I L Sbjct: 132 YEVDLFGRLRAA-SQAAEFDAVASENLLRDTQLLIQSRVAETYFTLRALDEDQAIVADTL 190 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y+ + ++ +F G ++L + +L+AE+ + E+ L++ H ++ LLG PA Sbjct: 191 TAYRGTLSVTERRFEAGDVAELDVARLQAEVAATEAQAAALDQRRAQVAHALAVLLGEPA 250 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + F ++ I GIP ++++ RPD+ E L + ++GIAK+ P Sbjct: 251 STFDVAAASWADQGWAGSVPVIPAGIPGEVLKRRPDVLAAEAALYGAQRRVGIAKAAWLP 310 Query: 302 SLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +LSL G + N F +WS L IFD G+ ++ + A+ + T+ Sbjct: 311 ALSLTADGGYASGDLGNLFEDAAKNWSLTGILSQAIFDGGRRQAGVDYAKGGLDVAFATY 370 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+T L A +VE+ LT + ++ AV +++++S Y G S L++LD + Sbjct: 371 QQTALVAFADVEDQLTDLIWLRQQEAAQDRAVTAATRALAMSQSRYTNGSASQLEVLDAQ 430 Query: 419 RATAKVEVDLSIAKRQLA------KSYVDLYIAIGSGYN 451 R L+I ++ LA ++ V L AIG G+ Sbjct: 431 RQL------LAIRRQSLAVRSAQYQATVGLIRAIGGGWG 463 >gi|187927168|ref|YP_001897655.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12J] gi|187724058|gb|ACD25223.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] Length = 579 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/460 (21%), Positives = 210/460 (45%), Gaps = 60/460 (13%) Query: 5 RAIFSLFIVLLA--GCTVGPEYTKPHMPLLPTQFSI--------------GNSKNLINID 48 RA ++ I LA GC VGP++ P P T +S G +++L++ + Sbjct: 103 RAAGAVLIAALAVSGCAVGPDFKAPAGPAA-TGYSAQPVSRETASAPVVGGEAQHLVDAN 161 Query: 49 T-LKWWESFNDTSLNKLVKIALQQNLTILQATERIN---------------AAKENILSV 92 WW F +L+ LV AL+ + ++ QA R+ + + +V Sbjct: 162 VPADWWHLFRSPALDALVDEALRASPSVAQAEARLRQAQAEAQAQFGYALPSVDGTVSAV 221 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 R + P ++ + + P T + L + +D+FG RR +E+S A +D+ +++ Sbjct: 222 RQQINPEAFGFNTPK--PGPFTLYSASLSVSYALDIFGGVRRALEASRAQVDTQRYELEA 279 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L++ ++ + + +I+ ++ +K +E++ + + G +++ Sbjct: 280 ARLSLAGNVVTTAVRIAALDAQIATTQRLAAEQRKQLEITERRLSVGGVAQVDAFSQRTL 339 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG---------YPATEFLHYMQKQSNNFQPNLYIP 262 + ++ +P L + H +S LLG P+ + LH L P Sbjct: 340 VAQTDATLPPLAQQAAQQRHRLSVLLGREPGAGLPDLPSLDALH------------LPDP 387 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPG 319 + + +P+ L + RPDIR E ++ A +G+A ++L+P ++L+ GS A + N Sbjct: 388 LPVSLPSTLAQRRPDIRAAEAMWHEASANVGVATANLFPRITLSAGLGSEATSFRNLLGA 447 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 ++ W+ G L P+F G +++ R AE++ +++ VL ++EV + L ++N D Sbjct: 448 GSSIWNLGAGLTQPLFHGGTLRAKKREAEAAYDAAGAAYKQAVLQGLQEVADTLHAVNND 507 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + A + ++++ + + G S L +LD +R Sbjct: 508 AQTLQARALATDQAQQTLRAAQARHAAGGISTLTLLDAQR 547 >gi|295676313|ref|YP_003604837.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295436156|gb|ADG15326.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 516 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 125/468 (26%), Positives = 216/468 (46%), Gaps = 26/468 (5%) Query: 6 AIFSLFIVL-LAGCT-VGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFNDT 59 I +LF L L+GC VGP++ KP +S + ++ D +WW F D Sbjct: 9 GIAALFWALGLSGCMRVGPDF-KPQHEAWSEHWSSASITQVTQQSAQPDARQWWLIFGDQ 67 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L L+ A N + A R+ A+ + A +P +S + + + S G Sbjct: 68 NLEGLIAAADANNGDLKIAGLRVLEARAQLGIALAGRYPQ-VQQVSADVLASARKRSGGA 126 Query: 120 -------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 W++D +G+ R IES+ A +A A D A + + +++ +Y Sbjct: 127 NPRSGAFVQYGAGFAIGWELDFWGRFSRAIESADAAFFAAQANRDDALVLLHAQVADTYF 186 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + R+ IA + L K++ +++ F G + +L + + + S IP LE Sbjct: 187 TLRVAQARLRIARENAQLQKRSYDIAQKLFKAGESDELDFQQAKTQYLGTLSSIPDLESQ 246 Query: 226 FRMNVHNISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H +S L+G Q P + + +PADL+ RPD+R E + Sbjct: 247 IVLARHALSVLIGRAPGPLPELDAQAGKEGVVPLVDHAVLQDVPADLLLRRPDVRAAEYQ 306 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKS 342 +A A IG+AK+DLYPS+SL G++ T +S G + F GP + +FD G+I + Sbjct: 307 MASQSALIGVAKADLYPSVSLLGTLTWTA-SSLAGAPSTLLFAAGPSVTWNVFDYGRITN 365 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+R ++ QE + +Q TV A +E ++A T++ + T L A ++S++L+ Sbjct: 366 NVRVQDARLQELTVAYQNTVREAAREADDAATALIAALQRDTILNDAQGAARRSLTLANT 425 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR+G +LD +RA + + + S + LY A+G G+ Sbjct: 426 IYREGYSDFQRVLDAQRALFAQQDAYVVNRSNALGSVIALYKALGGGW 473 >gi|172063690|ref|YP_001811341.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171996207|gb|ACB67125.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 464 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 111/447 (24%), Positives = 203/447 (45%), Gaps = 19/447 (4%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 CT P T PL T + + + DT WW F+D L++LV AL NL + Sbjct: 19 CTSAPVATVSPPPLAATYANADLAASGPAADTGAWWHGFHDPILDRLVDTALANNLDLKA 78 Query: 78 ATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTG-QLDSD--WK 125 A RI+AA+ + + FPS S S F + T L++ W+ Sbjct: 79 AVARIDAARAVRIGAASQRFPSLDLNASAGRQRLSASQAFPTDTPTTGNAFDLNASLAWE 138 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ID+FG+ R+ + ++ A++ SA ++ I + + +Y+ R ++R+++ Sbjct: 139 IDIFGRIRQGVSAADADMASAQNDAAAVRIATIDETVRTYVTVRGLEQRLALVEANALSQ 198 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + E + F G + + A+ ++ +++P L+ + +H +S + + Sbjct: 199 RGTEESTRRLFDAGVVPVADVDRAAAQTETTLAELPALQLQRQAAIHRLSIITASTPQDI 258 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + + P IG PADL+R RPD+R E ++ + A+IG+A++DL P L Sbjct: 259 YARVDPPAPGPVWTAAAP-GIGTPADLLRRRPDVRAAEARVVAAYARIGVAEADLKPHLQ 317 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L G I D F G + W G P+FD G+ +S + + A + ++ Sbjct: 318 LIGVIGAAIDG-FSGATLARSLAWMAGAGASAPLFDGGRRRSVVALRSAQADQALAAYRA 376 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVL A+ +VE ++ + D +L+ AV + + + ++ G + +D L+++R+ Sbjct: 377 TVLTAVSDVETSVAATARDHSRTERLERAVANARGAYTQINQSWHSGESAFIDTLEVQRS 436 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 E L+ A+ S+V L A+G Sbjct: 437 LLAAEDSLAQARTDEVLSHVRLMSALG 463 >gi|307727275|ref|YP_003910488.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307587800|gb|ADN61197.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 525 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 218/481 (45%), Gaps = 59/481 (12%) Query: 18 CTVGPEYTKPHMPLLPTQF----------------SIGNSKNLINIDTL---KWWESFND 58 C+V P Y +P + P F G K D +WW+ F D Sbjct: 26 CSVEPTYKRPEVDT-PAAFKEAPVAASGASAVSAQDTGTWKTAQPADDAHRGEWWKIFGD 84 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFI 109 L+ L + A N + A R+ A+ + ++D FP AS + +F Sbjct: 85 PQLDALEEQAAAANQDLKAAAARVQQARAVTRAAKSDWFPKFDAGFGPTRERASAASQFQ 144 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P+ +TG Q+ + ++ DLFG+ ++ +S A+ + A +L++ + + + Sbjct: 145 PDSAGGTTGTIWRAQVGASYEADLFGRVGSNVNASRADEQQSEALFRSVQLSLQADVAQN 204 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R + + + L + ++L +F +G S+L + + E+ S +D + Sbjct: 205 YFQLRELDTDQDLYRRTVALREDTLKLIERRFKEGDISELDVSRARNELASARADAVGIA 264 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIR 279 + + H+++ LLG P EF +F P+ + G+P+ L+ RPD+ Sbjct: 265 RQRAASEHSLAILLGKPPAEF---------SFAEAPLTPVTVRVPPGLPSALLERRPDVS 315 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP----KL 330 E+ +A + A++G+AKS +P L + G A ++++ G WS GP L Sbjct: 316 AAERAMAAANARVGLAKSAFFPKLDITG--AFGYESATLGDLFMWSSRAFILGPFAGTAL 373 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIFD G+ K+N+ +A + E +++ VL A +EVE+ L + + + + +AV Sbjct: 374 TVPIFDGGRRKANLAQARARYDEDVAQYRQQVLVAFREVEDNLADLRLLEDQMREQNNAV 433 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +++ LS Y +G S LD++D ER ++ S + A + V+L A+G G+ Sbjct: 434 QASQRAARLSRTQYTEGAVSYLDVIDGERQVLSTQLQASHLQGTQAVATVNLIRALGGGW 493 Query: 451 N 451 Sbjct: 494 G 494 >gi|39997789|ref|NP_953740.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] gi|39984681|gb|AAR36067.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] gi|307635082|gb|ADI85453.2| efflux pump, RND family, outer membrane protein [Geobacter sulfurreducens KN400] Length = 512 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 215/466 (46%), Gaps = 31/466 (6%) Query: 9 SLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------WWESFNDTSL 61 S+ + LAGCT + P+Y +P P+ P + G + T K W E F D L Sbjct: 51 SIMTLTLAGCTTMAPKYERPAAPV-PVAWPEGPAYKQTASATEKPVADIPWQEFFVDEKL 109 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-NSTGQL 120 +KL+ +AL+ N + A I ++ R+DLFP AS F + ++TG+ Sbjct: 110 HKLIALALENNRDLRAAALNIERSRAQYQIRRSDLFPKVDASAGATFTRQPEGLSATGRA 169 Query: 121 D-----------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDA 167 D S +++DLFG+ R ++ L + A+ + +++++S++ +Y+ Sbjct: 170 DTIDQYSVGLGVSSYELDLFGRVRSLKDQALEQYLATEQARRSV-QISLVSEVAVNYLTL 228 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +ER+ +A + L +++ +L+ +F G +S L L + + + + DI Sbjct: 229 AADRERLKLAQETLANQQESYQLTKSRFDAGVSSALDLHQAQTSVDAARVDIARFTTLVA 288 Query: 228 MNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + +S ++G P E L + + + G+P+D++ RPDI E L Sbjct: 289 QDGNALSLVVGSPVPAELLPSALSDTLTALKD----VAPGLPSDVLLRRPDILQAENLLK 344 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A+++ +P ++L ++ D+ F G + WSF P++ LPIF G ++ Sbjct: 345 GANANIGAARANFFPRITLVSNVGFGSDDLAKLFSGDSFTWSFAPRITLPIFTAGANQAT 404 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + AE+ +++ + A +EV +AL +T Q + +S LS Sbjct: 405 LEVAEADRNIAVAQYEKVIQTAFREVADALAQRGTIDDQLTAQQSLSDATAESHRLSQAR 464 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G + L +LD +RA + +L + + LY +G G Sbjct: 465 YEKGVDNYLQVLDSQRALYSAQQNLIGVRLVRLLNLATLYKVLGGG 510 >gi|330816305|ref|YP_004360010.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] gi|327368698|gb|AEA60054.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] Length = 549 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 122/481 (25%), Positives = 213/481 (44%), Gaps = 57/481 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----------IDTLKWWE 54 A F+ LAGC VGP+Y P L P Q ++ +DT WW Sbjct: 34 AAACAFVFALAGCAVGPDYKPPAAELAPFQHVPASTSAASQAQGAAAAPAPSLDT--WWT 91 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISH---- 106 F D L +V AL QNL + A R+ A+ + A+L P+ AS H Sbjct: 92 GFQDPMLVSIVDRALAQNLDLAAAFARVRQARAAASAAGAELLPTFDLDGSASEQHQSEL 151 Query: 107 -------RFIPNLKTNS---TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 + P N T + W+IDL G RR+ ++ +A A ++ Sbjct: 152 SPTGSLAKAFPGYDRNQREYTLGAAASWEIDLAGGLRRNAAAAANEAQAAEADRLGTRVT 211 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V + +Y+ R ++ R+++A+ + +EL + GA + + + +A ++ Sbjct: 212 VAADAADAYLQVRGYQARLAVANDQVQTDAHLLELVKARRRAGAADEREIAQADALLRQA 271 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIP------ 268 + +PTL+ + ++ + L+G Q + L +P I GIP Sbjct: 272 RALVPTLQTNLVAQLNRLDILMG-----------AQPGTYASQLALPGEIPGIPPVDASA 320 Query: 269 --ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF 326 D++R RPD+ E++LA S +IG A SD YP LS++G + ++ + T +F Sbjct: 321 TPTDVLRRRPDVIAAERRLAASNERIGAALSDYYPKLSISGLLGFDSISAGQLF-TARAF 379 Query: 327 GPK----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 P L +FD GK+ + + A + E ++++TVL A ++VENA ++++ + Sbjct: 380 QPGVTAGLRWRLFDFGKVDAEVASARGANAEALASYRQTVLKAAEDVENAFVALSQTQLR 439 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +L V+ ++ LS Y+ G +L D+LD +R DL + A++ V + Sbjct: 440 QAELDAEVKSLTRARDLSERAYKAGAITLTDVLDADRQLLSARDDLDATRADSARAAVSV 499 Query: 443 Y 443 + Sbjct: 500 F 500 >gi|148255322|ref|YP_001239907.1| multidrug efflux system outer membrane subunit [Bradyrhizobium sp. BTAi1] gi|146407495|gb|ABQ36001.1| putative multidrug efflux system, outer membrane subunit (efflux pump component) (TolC family) [Bradyrhizobium sp. BTAi1] Length = 507 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 114/468 (24%), Positives = 209/468 (44%), Gaps = 50/468 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC + + P + + P ++ ++ TL WW F L +L++ A NL I Sbjct: 50 AGCLLTQDIPDPALDI-PNRYKSAAGADMAAPPTLDWWRGFGSRELTQLMEEAQSVNLDI 108 Query: 76 LQATERINAAKENILSVRADLFPS-----------------SYASISHRFIPNLKTNSTG 118 A R A A L PS S + R + N + + Sbjct: 109 AAAVARFRQADALARQAGAALLPSLSTTGQETYSRTSGSSSSGLTNGGREVVNYQAS--- 165 Query: 119 QLDSDWKIDLFGQRRHI-----ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + +++D FGQ R E+++AN D D+ +L ++ + +Y ++ Sbjct: 166 -LSASYQLDFFGQNRDALQAAEETAVANRFDR-----DVTQLTTLATVANAYFQVLAAQD 219 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI A + + + ++ + G + L + + E+ + + ++ +P L ++ NV+ Sbjct: 220 RIRTAERNIASATRVLDAIRERQKAGTGNDLDVAQQESVLANQKAAVPPLRQTLDQNVNA 279 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L+ + E + + + P G+P++L+ RPDIR QE +LA + A + Sbjct: 280 LAVLVAR-SPEGIRVSGGSLDQIKTPRVTP---GLPSELLTQRPDIRRQEAQLASATANV 335 Query: 293 GIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G A++ +PS+ L G S AL + F + +S L PIFD G+I N A Sbjct: 336 GSARAQFFPSIQLTGNGGYQSAALV--SLFQPHAAFFSLAGSLTQPIFDGGRILGNFENA 393 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ---HAVELHKKSMSLSMINY 404 ++ E T+++TV+ A +V NAL +I K+ +LQ V +++ LS Sbjct: 394 KARQDELLQTYRKTVIQAFTDVNNALFAI---KQTTIRLQLQRQVVAASRRAFELSEQQL 450 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G ++ +L+ + + E L A+ +++V LY A+G G+ P Sbjct: 451 RAGTADIVTVLNTQLTLFQAEDALWQAQLARLQAFVSLYQALGGGWEP 498 >gi|311104644|ref|YP_003977497.1| outer membrane protein OprM 1 [Achromobacter xylosoxidans A8] gi|310759333|gb|ADP14782.1| outer membrane protein OprM 1 [Achromobacter xylosoxidans A8] Length = 460 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 102/451 (22%), Positives = 208/451 (46%), Gaps = 22/451 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC++ P Y +P P+ P + + + W + FND +L + AL+ N + Sbjct: 15 GCSLAPTYERPAAPV-PHAYDTPAADGQAAVPQ-DWRDYFNDPALQAWIAAALENNRNLR 72 Query: 77 QATERINAAKENILSVRADLFPS----------SYASISHRFIPNLKTNSTGQLDSDWKI 126 A RI A+ +AD PS A +P + +++ Sbjct: 73 VAALRIQEARALYGVQQADRLPSIDGTGEFSRGRGAEPGQPRMPVADRYRAAVGIAAFEL 132 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D FG+ + + +++L+ ++ A L+++S+ +Y + R E++ + L L + Sbjct: 133 DFFGRVKSLSDAALSRYLASEEAHRAATLSLVSETAAAYFNQRSLAEQLRLTESTLALRE 192 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +++L+ ++ G + + L + ++S + L + +R +VH + L G +F Sbjct: 193 ASLKLTQRRYDAGLETAVGLRTAQMLVESSRATHAELSREYRQSVHTLGLLAG----DFS 248 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + + P+ G+P+ L+ RPD+R E L + A IG A++ +PS+ L Sbjct: 249 LPPDTDAVTLESQSLTPLAAGLPSALLIRRPDLRQAEDTLRAANADIGAARAAFFPSVQL 308 Query: 306 N---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 G+ A + + F W+F PKL LPIF+ G+ +N+ AE+ ++ ++ Sbjct: 309 TTDIGTTAGSFSDLFGSGTGTWTFAPKLTLPIFNAGRNSANLSLAEARKDIAVAQYEGSI 368 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A +EV +AL++ + + + + + + L+ Y +G S L++L+ +R+ Sbjct: 369 QQAFREVADALSARDTLRAQIDAQRKVRDADRDRQRLTERRYERGVASYLEMLEAQRSLF 428 Query: 423 KVEVD-LSIAKRQLAKSYVDLYIAIGSGYNP 452 + E + + + +R+L + V+LY A+G P Sbjct: 429 ESEQEFIRLQQRRLVNA-VELYKALGGWEQP 458 >gi|293371576|ref|ZP_06617991.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|292633439|gb|EFF52007.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] Length = 454 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 102/418 (24%), Positives = 203/418 (48%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF DT L+ L+ +A+ +N ++ A RI AA+ ++ R++ FPS + R Sbjct: 42 WWKSFQDTKLDSLIALAVDRNYSVAMAINRIAAARASLWIERSNFFPSIGLNAGWTRQET 101 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 102 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 161 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + S ++ IP Sbjct: 162 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIP 221 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S+ P+ PI +G+P DL+ RPD+R Sbjct: 222 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SSGTLPDYMEPIGVGMPVDLLLRRPDVRS 279 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 280 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLNW 334 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ S K + L+ Sbjct: 335 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQ 394 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 395 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 452 >gi|120597958|ref|YP_962532.1| RND efflux system outer membrane lipoprotein [Shewanella sp. W3-18-1] gi|120558051|gb|ABM23978.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. W3-18-1] Length = 497 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 218/470 (46%), Gaps = 32/470 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKN------LINIDTLKWWESFNDTSL 61 F + LAGC++ P+Y +P P+ P+ + + + + W + F D L Sbjct: 19 FAIALAGCSMAPKYDRPPAPIDIVYPSGAAYAEPAKATPEAPVTDAADIGWRDFFRDPLL 78 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG 118 +L+ IAL+ N + +A + AA+ RA++ P+ S + R +L ++TG Sbjct: 79 QQLIGIALESNRDMRKAALNVEAAQALYRIQRAEVLPNLGVSGRGAAERLPADL--SNTG 136 Query: 119 QLD-----------SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYID 166 D + W++D++G+ R + + A + IA ++++IS++ +Y+ Sbjct: 137 AADVVRRYEVAGVTAAWELDVWGRIRSLSNQALASYLAMDETRIATQMSLISEVANAYLT 196 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +E + + + L K++ EL+ F G ++L + + E +++ E++ + Sbjct: 197 LRADQELLQLTGETLGTQKRSHELTAQLFEAGNATQLDVRRSEIVLRTAEANFADYTRQT 256 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKK 284 + + + LLG P T L Q P+ +P + G+P++L+ RPD+R E+ Sbjct: 257 AKDRNALVLLLGQPLTLELS-QQLDKAIVLPDGIVPTELPSGLPSELLVRRPDVRAAEQV 315 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +P++SL GS D F + WSF P++ +PIF G ++ Sbjct: 316 LLGANASIGAARAAFFPTISLTGSAGTASASLDGLFESGSRAWSFLPQITVPIFRGGALR 375 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A + + +++++ A EV + L + + Q V + L+ Sbjct: 376 ANLDVAHVKKRIEIANYEKSIQVAFSEVADGLAGKRTLDEQIRSEQFLVAASQGMYDLAE 435 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+G L +LD +R + L + + + LY A+G G+ Sbjct: 436 QRFREGVDDNLTLLDAQRTLYSAQQTLVRTRLARLSNLIALYKALGGGWT 485 >gi|330993094|ref|ZP_08317032.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329759864|gb|EGG76370.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 499 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 116/478 (24%), Positives = 221/478 (46%), Gaps = 46/478 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-----KNLINIDTLKWWESFNDTSLNK 63 + ++LLAGCT+ P Y +P PL T + N+ +N + D L W E F D L Sbjct: 14 GMAMMLLAGCTMIPHYKRPTPPLARTWPAYANTGQPVIENPLAAD-LGWAEFFTDPRLRA 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIP 110 L+ IA+++N + QA I A+ A LFP S A +S F P Sbjct: 73 LIAIAIRENRDLRQAAADIRRAQGQFDIQHAGLFPAIGGGGEAMFQGPSGAAGLS--FAP 130 Query: 111 NLKTNS--------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISK 159 L T + G S ++IDLFG+ R + A + A Q + A+ +++IS+ Sbjct: 131 GLDTGNPPMFKYFQMGVGVSSYEIDLFGRIRSLSREAA--EHALMQRENARSMLISIISQ 188 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI + + ++ + + + +++ +F G T ++++ + E ++ + Sbjct: 189 VATAYISWLGDQAALRLSDETMASQQATLDMVKARFAHGETDEMTVRQTETQVAQSGAFR 248 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + + I+ L+G P + L + + + G+PA+++ +RPDI Sbjct: 249 DESRRHVAQDENLITLLIGQPIPDNLPPARPLGEQ---TIMQDLPPGLPAEVLEHRPDIM 305 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E L + A IG AK+ YP ++L +G +L F T W P+L +P+ + Sbjct: 306 SAEHDLLAANADIGAAKAAFYPRITLTASDGISSLQPHRLFTSAATTWGVSPQLQVPLLN 365 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ N++ + + + +++TV +A +EV +AL + + + ++ V + Sbjct: 366 WGQNSGNLKASRAMRASKAAAYEKTVQSAFREVADALAARDTYRDETGQMDRYVSTTGDA 425 Query: 397 MSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+M+ YR G S L L +R + ++ +++++ Q + V LY A+G G+ Sbjct: 426 YRLAMMRYRAGTDSYLTALVSQRNYLQAQQWQISIAVSRYQ---NLVTLYRALGGGWT 480 >gi|146307798|ref|YP_001188263.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina ymp] gi|145575999|gb|ABP85531.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas mendocina ymp] Length = 487 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 109/450 (24%), Positives = 195/450 (43%), Gaps = 32/450 (7%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATER 81 P++ P +P T FS + WW F+D L LV A+QQN + A R Sbjct: 23 PQHPAPQLP--DTWFSAAGAHPADAESLASWWRQFDDPQLTALVHRAMQQNHDVRLAMAR 80 Query: 82 INAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQ-------------------- 119 +++A+ + RA L PS S S ++I N + G Sbjct: 81 VDSARAQLRQSRAGLLPSFDLPGSASRQWIENDQDAEPGSPLAEFIPDDDPIAFDSWELA 140 Query: 120 LDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W++DLFG R S A L SA AQ A+L V + Y+ R + + ++ Sbjct: 141 LQATWELDLFGATRARRDSAAQQLRSAEAQTVAARLAVAANTAQGYLQLRALQGQRALLV 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +++ ++ ++ L F G ++L + AE S+E+D+ L+ + TLL Sbjct: 201 EGIEVARELERIAGLLFHAGEVTRLDVEATSAERASLEADLDELDIHLAEAQLALDTLLA 260 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P + +H ++ P I G P DL+R RPD+ + +L + + A+ Sbjct: 261 EPPGSSAVHLA---ASTAVPLAESRIAAGQPIDLLRRRPDLIAEAARLDAAELQALAARR 317 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 DL+P L++ ++ + ++ + G LP+ D + I A++ + Sbjct: 318 DLFPKLAVQAAVGRSGFALGDAISSASNFARVGATFGLPLLDYANRGAAIELADAEGEGA 377 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 YI +++ + A++EVE LT I ++ L E + + L+ +Y G +L ++ Sbjct: 378 YIAFEQALTRALEEVERGLTRIAGQQRRHAALSRTREHREHAHRLAQRSYELGEANLSEV 437 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 LD +R + + LA + V LY+ Sbjct: 438 LDAQRGALQARQRALEGRAALATAQVALYV 467 >gi|260175025|ref|ZP_05761437.1| outer membrane efflux protein oprM precursor [Bacteroides sp. D2] gi|315923256|ref|ZP_07919496.1| outer membrane efflux protein oprM [Bacteroides sp. D2] gi|313697131|gb|EFS33966.1| outer membrane efflux protein oprM [Bacteroides sp. D2] Length = 465 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 203/418 (48%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF DT L+ L+ +A+ +N ++ A RI AA+ N+ R++ FPS + R Sbjct: 53 WWKSFQDTKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFFPSIGLNAGWTRQET 112 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + S ++ IP Sbjct: 173 ASAYINLRELQQELEVVKKNTASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S+ P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SSGTLPDYMEPIGVGMPVDLLLRRPDVRS 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 291 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLNW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ S K + L+ Sbjct: 346 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 463 >gi|160898192|ref|YP_001563774.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160363776|gb|ABX35389.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 480 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 211/459 (45%), Gaps = 29/459 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLP--TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ LAGC VGP+Y +P +P T+ + + + + +WW+++ L+ LV+ AL Sbjct: 22 VLSLAGCAVGPDYARPAVPRADALTREPLATAGHSGPVQR-QWWKAYGSPELDALVQEAL 80 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTN------S 116 +++ TI AT + AA++N+++ R +P+ + + P L + + Sbjct: 81 ERSPTIEAATATLRAARQNVIAQRGFFYPTVQLGYNRTRQNTGQSMSPALNSGETLYSYN 140 Query: 117 TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T QL ++ D+FG RR +E +A+ + Q+ A+L + S + + A E+ Sbjct: 141 TAQLSINYTPDIFGGNRRQVEGLMASEEGQRLQLQAARLTLASNVAGGMLQAAMLAEQAH 200 Query: 176 IAHQILDLYKKNIELSHLKFTQ--GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + Q + ++ +L H++ Q G S L + + + ++ +P L K + + Sbjct: 201 LIEQAIAAAQE--QLRHMRLQQRNGYASGLDVATQQTLLVQMQQALPPLRKELEQTRNLL 258 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TL G + + S+ QP L + + L+ RPD+R E + + A IG Sbjct: 259 ATLAGRTPDQAPE-VPPLSSFSQPQL----PQAVASALVEQRPDVRIAETDVQQASAAIG 313 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A++ P LS+ G A + F N W+ G L P+F G +++ R A++ Sbjct: 314 VARAARLPQLSITAALGGGATSFARMFAAGNPTWALGAGLLQPLFAGGTLQARERAAQAE 373 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ VL++ ++V NAL +++ D K V Q + + ++ L+ R G + Sbjct: 374 FDAAAARYRGAVLSSFQDVANALYALDIDAKAVEMAQEGEKASRSTLDLTRTQLRNGYSA 433 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L E++ + A+ L V LY A+G G Sbjct: 434 QPAALAAEQSWLQARAAHVAARGALLGDTVALYQALGGG 472 >gi|91785070|ref|YP_560276.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91689024|gb|ABE32224.1| RND efflux system, outer membrane lipoprotein, NodT subfamily [Burkholderia xenovorans LB400] Length = 515 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 212/476 (44%), Gaps = 43/476 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----------------------- 49 + AGCT+ P+Y +P P+ T F G + T Sbjct: 13 LFAAGCTMAPKYERPAAPVTAT-FPTGGVYDTQPGATQPGQQQPGTTGAARTASGQAAAD 71 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--- 106 + W + F D + +L++IAL+ N + + + A+ VRA L P+ AS S Sbjct: 72 IGWRDFFVDPRMQRLIEIALKNNRDLRVSVLNMQASAAQFRIVRAGLLPTLDASASQTKQ 131 Query: 107 ------RFIPNLKTNS-TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 F +NS + L++ W+ID FG+ + + + +LA + A++ ++S Sbjct: 132 RTPKDLSFFDQTISNSYSVGLNASWEIDFFGRIQSLKDQALAQYLATAQARKAAEITLVS 191 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ + + + L +++ ++ L+F G S+L L + + ++ ++ Sbjct: 192 QVANQYMTVLELDDLLKVTENTLKTSQESYRIAKLQFDNGTGSELDLRQSQTVVEQALAN 251 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ + + LLG P + L N NL I G+P+DL+ RPDI Sbjct: 252 LQQQQRLRAQADNALVLLLGEPLPDDLPPGMTLDNQ---NLLTDIPAGLPSDLLTRRPDI 308 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPI 334 E+ L + A IG A++ +P +SL GS T S G + WSF P + LPI Sbjct: 309 MEAEENLLAANANIGAARAAFFPKVSLTGSFG-TLSPSLGGLFKPGSAAWSFAPSITLPI 367 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + Q T+++ + A +EV +AL + + + L+ + Sbjct: 368 FEGGQNLANLDLANIQKKVQIATYEKAIQTAFREVADALAARGTYDQQIQALERNTFAEQ 427 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + LS + Y G S L +L + + L A+ + ++ V LY A+G G+ Sbjct: 428 RRLDLSNLRYTNGVDSYLSVLTAQTDLYSSQQLLVTARMERLQNLVTLYQALGGGW 483 >gi|325521814|gb|EGD00545.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 511 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 217/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDVSTPAAFKEAPTLAPGEQAGTWKTAEPSDGAHRGEWWKVFGDPVLDSLEAQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLKTNSTG 118 AL N + A R+ A+ S R+ FP A S + +F P +T Sbjct: 92 ALAANQNLKAAAARVEEARAATRSARSQWFPQIGAGFGPTREGLSSASQFQPQGTGPTTA 151 Query: 119 QL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTGSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADF---------SFKEAPIVPVAVKVPPGLPSALLERRPDVAAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|167033433|ref|YP_001668664.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166859921|gb|ABY98328.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 467 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 233/480 (48%), Gaps = 53/480 (11%) Query: 6 AIFSLFI-----VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 A+ +LF+ +L +GC++ P Y +P P+ Q+S + +D L W D + Sbjct: 2 AMRNLFVPIAMALLASGCSLAPTYQRPEAPV-ANQWSDATNHTGQQVDKLGWQAFIVDPT 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NLKTN-- 115 L +LV AL N ++ Q I+ A+ RAD P S+ AS + + P L ++ Sbjct: 61 LRQLVNTALDDNRSLRQTLLDIDQARAQFRIQRADRVPGLSAGASGNRQHQPAGLSSDGR 120 Query: 116 ----STGQLD---SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPS 163 ST Q+ ++++DLFG+ + + E LA ++ A A++ +I+++ + Sbjct: 121 EGAASTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEAGRA----ARIALIAEVSQA 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL----SLVKLEAEIKSIESDI 219 Y+ + R+++ Q L ++++ L + G + L +L +E ES++ Sbjct: 177 YLTLDGSERRLALIRQTLASRERSLALIDQRRAAGTATALDHQEALGLVEQARAEQESNL 236 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 ++++ + + L+G AT+ L +++Q+ +P++ I G P+ L+ RPDI Sbjct: 237 RQRQQAY----NALVLLVGNSEATQALP-VERQA---EPSVLQDITPGAPSALLERRPDI 288 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIF 335 E +L A IG A++ +P +SL GS+ + F G + WSF P++ LPIF Sbjct: 289 LAAEHRLRARNADIGAARAAFFPRISLTGSLGTSSTQVSGLFEGGSRSWSFMPQVSLPIF 348 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ + AE+ ++ + A +EV +AL + + ++ + + + Sbjct: 349 DAGRNQAGLSLAEARKDSAVAAYEGAIQQAFREVADALAATDTLRREEVARRALADTSRA 408 Query: 396 SMSLSMINYRQGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++L+ Y G S L LD +R+ A +E +RQLA VDL+ A+G G+ Sbjct: 409 TLTLAKARYEGGIDSHLRYLDAQRSDFVNEAAYIEAS---TQRQLA--LVDLFRALGGGW 463 >gi|187919902|ref|YP_001888933.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187718340|gb|ACD19563.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 495 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 215/479 (44%), Gaps = 40/479 (8%) Query: 5 RAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI-DTLKW---------- 52 RA+ + I LL+ C+ P Y +P + P Q++ + DT W Sbjct: 13 RALAATLIGALLSACSTLPAYQRPSADI-PAQYAGAVHTGAVQASDTPGWAQAAPADSTP 71 Query: 53 ----WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--- 105 W FND LN+L N T+ +A ++ A+ + RA FP+ A ++ Sbjct: 72 RGPWWTIFNDPVLNELEARIDVSNQTVRKAVAQVQQARSMVDYQRAGFFPTITAGVAQDR 131 Query: 106 HRFIPNLKTNS---------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 +R N++ S + + + W+ DLFG+ R + + A+ ++ A ++ +L+ Sbjct: 132 YRTSQNVEGKSLAGKTVPDYSAGVSASWEPDLFGRVRDSVTGAQADAQASEADLEGVRLS 191 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + L Y R + + ++ Y ++L + + GA ++ + ++++ Sbjct: 192 MSADLAADYFSLRSLDTQKKLLDDSVNAYAAALKLLQQQLSNGAIDASAVAQATTQLEAT 251 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++ + H I+TL+G PA+ F + P I IG+P+ L+ R Sbjct: 252 RTQDTDIDVTRAQLQHAIATLIGEPASTFT--LPPNGTAVTPPA---IPIGVPSQLLERR 306 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYL 332 PDI E+++A + A+IG+A + +P L L+ S L P + WS GP+L Sbjct: 307 PDIAAAERRVASANAQIGVAHAAFFPDLVLSASAGLESTFFAPWLSAPSLFWSLGPQLAG 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD GK K+ + A + ++++VL A ++VE+ L++++ Q A Sbjct: 367 TLFDGGKRKATLHGATAQYDGAVADYRQSVLVAFQQVEDNLSALHSLADEAASQQRATTA 426 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S+ L+ + G S LD++ + A + IA RQL +S V L A+G + Sbjct: 427 ADLSLRLTTNRFNAGAVSYLDVVTAQTIALTNQRIADQIAARQL-ESSVLLLKALGGTW 484 >gi|83718331|ref|YP_439482.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83652156|gb|ABC36220.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 543 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPL---LPTQ---------FSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ PT + S N + W E F D L +L Sbjct: 51 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDIGWREFFVDPRLQRL 110 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 111 IEIALKNNRDLRVSVLNVEASRAQYRITRAGLFPTLDGTGTGTIQRTPAGVSVTGQPLIS 170 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 171 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 230 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I L + + +L+ L+F G S+L L + + +++ ++ ++ V+ Sbjct: 231 LLQITENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAVNA 290 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 291 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 347 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 348 GAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHV 407 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 408 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKNGVD 467 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 468 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 508 >gi|307296262|ref|ZP_07576089.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306878064|gb|EFN09287.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 462 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/412 (24%), Positives = 197/412 (47%), Gaps = 15/412 (3%) Query: 52 WWESFNDTSLNKLVKIAL---------QQNLTILQATERINAAKENILSVRADLFPSSYA 102 WW ++D L+ LV+ AL NL+ QA R A+ I + + + Sbjct: 54 WWRLYDDPRLDALVEQALAANTDLRVADANLSAAQAVLREAEAERTIGTTLSGGATLARP 113 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 S + +P + G L + + +DL G+ RR IE+S A++++ A D +++V + Sbjct: 114 SGTAESLPGVVGYDLG-LSASYPLDLNGRIRRAIEASAADVETVAAARDYVRVSVAAATA 172 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y +++ +++ L ++ + + F G + + + +A + + E+ +P Sbjct: 173 RAYAQVCAANYSLAVNRRVVALQRETLNATQRLFKGGRGTAFDVSRAQAAVDASEAGLPA 232 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + ++ ++TLLG ++ ++ + P L + +G A LIR RPDIR Sbjct: 233 FAAQRQAGLYLLATLLGRAPADYPKDVEDCAA--LPMLQAAMPVGDGAALIRRRPDIRQA 290 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGK 339 E+ +A A++G+A +DLYP + + GS+ L ++ G + S GP L ++ Sbjct: 291 ERGIAADTARVGVATADLYPQIGIGGSLGLAGPLRSAGSGASFGMSLGPLLSWSFPNRPV 350 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ I +A++ Q + TVL A+++ E AL S L A + S + Sbjct: 351 VRARIAQADAQVQADLARFDGTVLEALRQAETALESYRRHADQTAALDRARDSAGVSAAQ 410 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +R GR L +LD +R+ A E + A+ QL + + +++A+G G++ Sbjct: 411 AGKLFRFGRGDFLSLLDAQRSLANAEASAAAARVQLVQDQIAIFLALGGGWS 462 >gi|295700008|ref|YP_003607901.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295439221|gb|ADG18390.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 542 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 120/500 (24%), Positives = 220/500 (44%), Gaps = 64/500 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF-------------------------SIGN 40 A L I LLA C++ P Y +P + P F S G Sbjct: 18 AASGLLIALLAACSLEPTYKRPDVDT-PAAFKEAPAVKTSAAAASGAGAGSAGAAQSNGT 76 Query: 41 SKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 K D+ +WW+ F D L+ L + A N + A R+ A+ + ++D F Sbjct: 77 WKPAEPADSALRGEWWKVFGDPQLDALEEQAAAANQDLKAAAARVQQARAVTQAAKSDWF 136 Query: 98 PS---------SYASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANL 142 P AS + +F P+ +TG Q+ + ++ DLFG+ ++ ++ ++ Sbjct: 137 PKLDAGFGPTRERASAASQFQPDSAGGTTGTIWRAQVGASYEADLFGRVSSNVNAARSDE 196 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + A +L++ + + +Y R + + + L + ++L +F +G S+ Sbjct: 197 QQSEALFRSVQLSLQADVAQNYFQLRELDTDQDLYRRTVALREDTLKLVQRRFKEGDISE 256 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L L + E+ S +D + + + H+++ LLG P +F P + Sbjct: 257 LDLSRARNELASARADAVGVARQRAASEHSLAILLGKPPADFTFAEA-------PLALVT 309 Query: 263 INI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY 320 + + G+P+ L+ RPDI E+ + + A++G+AKS +P L + G A +++ G Sbjct: 310 VRVPAGLPSALLERRPDIAAAERAMQAANARVGLAKSAFFPKLDITG--AFGFESATLGD 367 Query: 321 NTHWS---------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 WS G L +PIFD G+ K+N+ +A S E +++ VL A +EVE+ Sbjct: 368 LFMWSSRAFILGPAVGTALTMPIFDGGRRKANLAQARSKYDEDVAQYRQQVLVAFREVED 427 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 L + + + AV+ +++ LS Y +G S LD++D ER + ++ S Sbjct: 428 NLADLRLLDDQMREQNDAVDASQRAAHLSRTQYTEGAVSYLDVIDGERQVLQSQLQASHL 487 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 A + V+L A+G G+ Sbjct: 488 AGTQAVATVNLIRALGGGWG 507 >gi|74317434|ref|YP_315174.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] gi|74056929|gb|AAZ97369.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] Length = 469 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 216/465 (46%), Gaps = 27/465 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQF-----SIGNSKNLINIDTLKWWESFNDTSLNK 63 +L L+ C++ P Y +P P+ P F + + + D + W + F D L + Sbjct: 10 TLAAAFLSACSMMPRYERPAAPV-PDAFPGSALASPATADAPPADAIAWRDYFADPHLRE 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNSTGQL 120 ++ +AL N + A I A+ RADLFP+ A ++ R L T + Sbjct: 69 VIALALANNRDLRVAALNIERARAQYRIQRADLFPAVSADGSEVAQRLPRTLSTTGDATV 128 Query: 121 D---------SDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S +++D FG+ R + + +L A++++++++ +++ Sbjct: 129 VRQYSATIGFSAYELDFFGRIRSLNAEALERYLGTEEARRSAQISLVAEVANTWLLLGFD 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +ER+++A + +K+ +L+ F GA S L L + + +++ +D+ + Sbjct: 189 RERLALARNTYETRQKSHDLTRRSFEAGAVSALDLNQSQTLLQTARADVAQFSAFVAQDA 248 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ L+G P + L + + +P G+P++++ RPDI E+ L + A Sbjct: 249 NLLALLVGAPVPDTLQPA-RLPDGVSAVAELPA--GVPSEVLARRPDILQAERALRAANA 305 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS+SL G+ + T D F + W F P++ +PIF+ G++++++ A Sbjct: 306 SIGAARAAFFPSISLTAEAGTASSTLDGLFESGSGTWRFIPQIRIPIFEAGRLRASLDVA 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E ++ + A +EV +AL + + Q VE + LS Y+ G Sbjct: 366 EVQRDINVAQYERAIQAAFREVADALAERATLSERLDARQKQVEATRAGFGLSEARYKSG 425 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQL-AKSYVDLYIAIGSGYN 451 S L +LD +R+ E L IA+R + A + V LY +G G+ Sbjct: 426 VDSYLGLLDAQRSLYAAEQAL-IAERLVDATNRVTLYRTLGGGWR 469 >gi|294139370|ref|YP_003555348.1| outer membrane efflux family protein [Shewanella violacea DSS12] gi|293325839|dbj|BAJ00570.1| outer membrane efflux family protein [Shewanella violacea DSS12] Length = 590 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 117/479 (24%), Positives = 234/479 (48%), Gaps = 44/479 (9%) Query: 15 LAGCT-VGPEYTKPHMPLLPTQFS----IGNSKNLINI--DTLKWWESFNDTSLNKLVKI 67 L+ CT +GP++ LP +S + + + D+ WW+ FND +LN LV+ Sbjct: 18 LSACTNLGPDFQTLAPKSLPKAWSDSALVDHEAEIEQTAQDSAMWWKQFNDPTLNILVER 77 Query: 68 ALQQNLTILQATERINAAKENILSVRADL-FPS---SYASISHRFIPNLKTNSTG-QLDS 122 A +QNL I A RI A+ IL + L +P + S++ + + N+ D+ Sbjct: 78 ANKQNLDIEAAGLRILQARM-ILGISDSLNYPQVQVASGSLAKVYRNDNSFNNLALSFDA 136 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D++G+ R +E+S A L ++ A + + + S++ +YI+ R F+ER+ ++ + + Sbjct: 137 GWEMDIWGKYARGVEASEAALYASIASYNDIAVTITSEVARNYINFRTFQERVLLSRRNI 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + ++ + ++ +++ G ++L + + ++++ S ++ +P+L+ + ++ LLG Sbjct: 197 HIQERVVHITQVQYDSGNVTELDVQQAKSQLYSTQAALPSLKIGMMQARNALAVLLGVMP 256 Query: 242 TEFLHYMQKQSNNFQPNLY---------------------IP----INIGIPADLIRNRP 276 E + ++ + + + Y +P ++ I A L+ RP Sbjct: 257 NEIVPMLESEQLKAKVDAYSIEYGKSETKRSMTDESSVSIVPTPPMLDARIDASLVMRRP 316 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNT-HWSFGPKLY 331 D++ E AKIG+A++ LYPS +L GSI + +SF ++ + GP Sbjct: 317 DLQVAELLAHGQSAKIGLAEAALYPSFTLFGSIGVNSMRPSGHSFSLSDSLTLTAGPSFS 376 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 IF G+IK+N+R ++ QE I + + VL A++EV AL S + ++ +V Sbjct: 377 WNIFQYGRIKNNVRLEDARLQEALIGYNKKVLLAVQEVSGALESYSLYREQKALRMSSVN 436 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++SM Y G+ +L+ + E + K +A V LY ++G G+ Sbjct: 437 ASVRAFNISMTQYENGQIGFERLLNSVEKMTRSEDSYAQIKGYVANQVVALYKSLGGGW 495 >gi|257140096|ref|ZP_05588358.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 513 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPL---LPTQ---------FSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ PT + S N + W E F D L +L Sbjct: 12 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDIGWREFFVDPRLQRL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 72 IEIALKNNRDLRVSVLNVEASRAQYRITRAGLFPTLDGTGTGTIQRTPAGVSVTGQPLIS 131 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 132 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I L + + +L+ L+F G S+L L + + +++ ++ ++ V+ Sbjct: 192 LLQITENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAVNA 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 252 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 308 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 309 GAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHV 368 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 369 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKNGVD 428 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 429 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 469 >gi|119896901|ref|YP_932114.1| putative outer membrane efflux protein [Azoarcus sp. BH72] gi|119669314|emb|CAL93227.1| putative outer membrane efflux protein [Azoarcus sp. BH72] Length = 473 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 123/468 (26%), Positives = 218/468 (46%), Gaps = 31/468 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSL 61 LR L L+AGC +P PL P Q++ G + DT WW+SF +L Sbjct: 8 LRLAPVLLAALVAGCAFTEPVARPDQPL-PAQWTEQPGPAAATPLPDT--WWQSFGSPAL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFI 109 + LV AL + + ER+ A+ + RA LFP + + Sbjct: 65 DALVAEALVASPDLQVQAERVLQAELALRQTRASLFPWLTLDADSGWRRADAGDRGASTV 124 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 KT S G L + +++DL+G+ ++ S+ A+L++ D +L++ + + +Y Sbjct: 125 TETKTTSLG-LSASYEVDLWGRVAANVGSARASLNATRYDRDSVRLSLAASVATTYFQLL 183 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ IA Q L + ++ + + ++ GA S L + + + + + I LE S R Sbjct: 184 TLQERLEIARQNLAIAERVLRVVEARYRNGAASALEVSQQRTTVLTQRAAIEPLEVSVRQ 243 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 ++ LLG Q + F+ L IP + G+P +L+ RPD+ E L Sbjct: 244 TRSALAILLG-------RNPQDAAPEFERLEALAIPTVTPGLPVELLLRRPDLASVEASL 296 Query: 286 ADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A + A I A++ L PS+SL+ G +A + S T S L IFD G++++ Sbjct: 297 AAASADIAAARAALLPSISLSAGGGVASSLLLSLADPGTTVSLSASLVQTIFDGGRLQAA 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A S +E +++ ++ A+KEVE+AL + + D + + ++++ L+ + Sbjct: 357 VDIARSRQRELLESYRSAIITALKEVEDALGNASRDANQEAAQREILAEAQRALRLAELR 416 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G LL +LD +R + L+ ++ V LY A+G G+ Sbjct: 417 YREGAADLLTVLDAQRTLFSAQDQLAQLRQARLTDAVGLYKALGGGWR 464 >gi|317402010|gb|EFV82609.1| NodT family RND efflux system [Achromobacter xylosoxidans C54] Length = 463 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 101/463 (21%), Positives = 215/463 (46%), Gaps = 36/463 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +L + L+GC++ P Y +P P+ P ++ ++ W FND +L + Sbjct: 6 MTLLALALSGCSLAPTYERPAAPV-PARYDT-PAQAGQAAAPQDWRAYFNDPALQAWIAA 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS-----------------SYASISHRFIP 110 AL N + A RI A+ +++ P+ S ++S R+ Sbjct: 64 ALANNRDLRVAALRIEEARALYGVQQSERLPAIDASGEFSRGRFTEPGQSGTAVSSRYRA 123 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + +++D FG+ R + +++LA ++ A L ++++ +Y + R Sbjct: 124 AVGITA-------FELDFFGRVRSLSDAALARYLASEEAHRAATLALVAETATAYFNQRS 176 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ + L L + +++L+ ++ G + + L + ++S + L + + Sbjct: 177 LAEQLRLTDSTLALREASLKLTQRRYDAGLETAIGLRTAQMLVESSRATRAELTREASLA 236 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H + L G +F + + P+ G+P++L+ RPD+R E+ L + Sbjct: 237 RHALGLLAG----DFALPLGVDPAPLESQSLTPLAAGLPSELLTRRPDLRQAEQALLAAN 292 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +PS+ L I T D + F G WSF P+L LPIF+ G+ ++N+ Sbjct: 293 ADIGAARAAFFPSVQLTTDIGTTADRFSDLFSGGTGGWSFAPRLTLPIFNAGRNRANLSL 352 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE+ ++ ++ A ++V +AL++ + + + + + ++ L+ Y + Sbjct: 353 AETRKHIAVAQYEGSIQAAFRDVADALSARDALRDQIEAQRKVRDADRERQRLAERRYTR 412 Query: 407 GRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGS 448 G + L++L+ +R+ + E + + + +R+L + VDLY A+G Sbjct: 413 GVANYLEMLEAQRSLFESEQEYIRLQQRRLVNA-VDLYKALGG 454 >gi|4321267|gb|AAD15665.1| outer membrane protein TbtM [Pseudomonas stutzeri] Length = 476 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 215/460 (46%), Gaps = 31/460 (6%) Query: 15 LAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L+GC++ P+Y +P MP+ + G + + + L W E F D +L +L+ ++L Sbjct: 14 LSGCSLIPDYQRPDMPVQAQWPEGAAYEQGAAASTTTAE-LGWREFFVDPTLQRLIVLSL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLKTNSTGQLD------ 121 + N + QA + A + R+DLFPS S + +P +N TG+ D Sbjct: 73 ENNRDLRQAALTVEAYRAQYRISRSDLFPSIGIDGSGQRQRLPADLSN-TGEADIASQYG 131 Query: 122 -----SDWKIDLFGQRRHIE-SSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++D FG+ R +E +LA L + AQ + ++ ++S++ +Y+ R + + Sbjct: 132 VTLGVSAYELDFFGRLRSLEEGALARYLATEEAQRSV-QIGLVSEVAMAYLTWRTDQGLL 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + H L Y K++ L G S L + + + ++ + R+ + + Sbjct: 191 ELTHDTLYSYGKSLSLVQAAHDVGTASALDVRQARSLVEQARVQFA---RYSRLVAQDAN 247 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L TE + + + ++ + +G+PADL+ RPDI E +L + A IG Sbjct: 248 LLRLLLGTELPADITDEPGS--DRMFAELPVGMPADLLLRRPDIIAAEFRLHAANANIGA 305 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+ L G+++ D F G + WSF P++ +PIF G++K+N+ AE Sbjct: 306 ARAAFFPSIRLTAAAGTLSGELDGLFEGGSGTWSFMPQINIPIFTAGRLKANLDYAEVQK 365 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++T+ A +EV + L + ++ + ++ + L+ Y +G + Sbjct: 366 DINIAEYEQTIQTAFREVADGLAARGTFEEQLQAQADLTTTTQEYLELAQQRYDEGVDNY 425 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + L + S V L+ A+G G+ Sbjct: 426 LAVLDAQRELFSAQQQLLSDRLLQLNSEVQLFRALGGGWT 465 >gi|83718989|ref|YP_441238.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83652814|gb|ABC36877.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 519 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPL---LPTQ---------FSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ PT + S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYRITRAGLFPTLDGTGTGTIQRTPAGVSVTGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I L + + +L+ L+F G S+L L + + +++ ++ ++ V+ Sbjct: 198 LLQITENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAVNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|331661934|ref|ZP_08362857.1| cation efflux system protein CusC [Escherichia coli TA143] gi|331060356|gb|EGI32320.1| cation efflux system protein CusC [Escherichia coli TA143] Length = 460 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 126/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLSTEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALIAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ NA KEV +AL ++ Q + + ++ + Y+ G S Sbjct: 360 QQSVVNYEQKTQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 420 LEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 458 >gi|120609090|ref|YP_968768.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1] gi|120587554|gb|ABM30994.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1] Length = 492 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/450 (23%), Positives = 202/450 (44%), Gaps = 16/450 (3%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC+ P Y +P P+ P + + W E F D L +L+ +AL+ N Sbjct: 26 GCSFIPTYERPAAPVPQAYPAAGAAAAPAGARAAADIDWREYFADPRLQRLIALALENNR 85 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKID 127 + A I A+ RA FP+ A+++ P+ T S G S W+ID Sbjct: 86 DLRVAALNIEQARAQFQIQRAGQFPTVNAAVNASRQPSATTGSYVNNYQVGLAVSAWEID 145 Query: 128 LFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FG+ + E +LA + ++++++ + + + +E + I+ + L + Sbjct: 146 FFGRIAALKEQALAQYFATEEARRATQISLVAAVASGWFNLLADEELLDISRRTLQTRDE 205 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 +++L+ L+ G +S+L + + ++ + ++ + + ++ LLG P + + Sbjct: 206 SVQLTRLRLENGVSSELDYSQAQGLAQAARATFAQQQRQRLQDENALALLLGQPLPQEIA 265 Query: 247 YMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 +P + G+P+DL+ RPDIR E++L + A IG A++ +P +SL Sbjct: 266 ATLDARTRLADAPAMPSLPAGLPSDLLVRRPDIRQAEQQLVAANANIGAARAAFFPRISL 325 Query: 306 N---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 G+++ F G + +S P+L LPIFD G+ ++ + A +++++ Sbjct: 326 TASAGTVSNELSGLFKGGSWAFSLAPQLALPIFDGGRNQATLDSARVGRDIAVAQYEKSI 385 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A +EV +AL + + K LS + YR G S LD+LD +R+ Sbjct: 386 QTAFREVSDALAGQATLGEQFAAQRAQAAADAKRFELSDLRYRNGVASYLDLLDAQRSLF 445 Query: 423 KVEVDLSIAKRQLA-KSYVDLYIAIGSGYN 451 E L + R L ++ V LY +G G+ Sbjct: 446 TSE-QLVVQTRLLQLQNQVALYKVLGGGWT 474 >gi|194290893|ref|YP_002006800.1| component of acridine efflux pump, outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] gi|193224728|emb|CAQ70739.1| component of acridine efflux pump, outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] Length = 482 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 108/456 (23%), Positives = 201/456 (44%), Gaps = 40/456 (8%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 +GP+Y +P P + Q+ I I D+ WW FND L LV AL N + A Sbjct: 21 IGPDYQRPATPDV-AQYRIDTGPLAIAADS-DWWNQFNDPVLTALVDEALANNFDVRIAA 78 Query: 80 ERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD-----------SDWKI 126 RI+ + ++ R+ FP + AS + + + LD + W++ Sbjct: 79 ARIDEFRGQLMVARSGFFPQLNLSASAARQRLGTFNGTPFAGLDGPRNTYQLLANASWEL 138 Query: 127 DLFGQ-RRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DL+G+ RR E++ A+L ++ YA+ + L++ + ++ Y R ++ +A Q L Sbjct: 139 DLWGRIRRQAEAAEASLWNAEYARRGVV-LSLAASVVQGYATLRGLDAQLDVAKQTLASR 197 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 +++ ++ G S++ L + E + E+ IP L + + +S L+G Sbjct: 198 GDGLDIFRQRYEGGVISQMELAQAENDFYVAEASIPPLRTAIAQTENALSVLMGREPGPI 257 Query: 245 LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + L P I +PA L+ RPD+ E+ + A++G A++ P++ Sbjct: 258 ------ERGKAVTALQAPSIGADMPATLLSRRPDVLQAEQSAIAANAQLGAAQALYLPAV 311 Query: 304 SLNGSIALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +L+G S PG H W FG L P+F G I+ ++ A + + + + Sbjct: 312 NLSGLFGAIA--SSPGALWHSASQVWGFGAGLTQPVFQGGAIRGQVQTASAQRDQAMLAY 369 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL----SMINYRQGRYSLLDI 414 Q TVL A+ +V AL + E + + L+ +KS+++ + Y G S L++ Sbjct: 370 QRTVLEALADVNTALANGTETRTRLGSLRE----QEKSLTIYADQAFARYEGGYSSYLEV 425 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ + + S LY ++G G+ Sbjct: 426 TNAREKLFNAQLAVIQGQVDTLTSTAALYKSLGGGW 461 >gi|78067407|ref|YP_370176.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77968152|gb|ABB09532.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 507 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/473 (23%), Positives = 213/473 (45%), Gaps = 32/473 (6%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ + G S N + W Sbjct: 6 ALTAIAVALFATGCTMAPHYKRPDAPVAQAYPAGGVYATQPGAAGARSANGQAATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + + I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGNVQRIPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSTTGAPMISRSYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QAQEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ + + + L + + L+ LKF G S+L L + + +++ + Sbjct: 185 ADQYLTLLSTDDLLKVTEDTLKSAQDSYNLTKLKFDNGTGSELDLRQAQTVVETALASQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + ++ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 SQARDRAQALNYLVLLIGEPLPDDLPAGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ L + A IG A++ +P +SL G+ T F WSF P++ +PIF+ Sbjct: 302 AEQTLLAANANIGAARAAFFPKISLTGAFGTGSPTLGGLFKAGTAAWSFAPQITMPIFEG 361 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 362 GQNIANLNLAHVQKRIEIANYEKAIQSAFREVADGLAARGTYDQQIAALERNEHAQQRRY 421 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + Y+ G S L +L + + L A+ + V LY A+G G+ Sbjct: 422 DLSDLRYKNGVDSYLSVLTAQTDLYNAQQSLISARLARWTNLVTLYRALGGGW 474 >gi|160884616|ref|ZP_02065619.1| hypothetical protein BACOVA_02605 [Bacteroides ovatus ATCC 8483] gi|237717559|ref|ZP_04548040.1| outer membrane efflux protein oprM [Bacteroides sp. 2_2_4] gi|156110355|gb|EDO12100.1| hypothetical protein BACOVA_02605 [Bacteroides ovatus ATCC 8483] gi|229453145|gb|EEO58936.1| outer membrane efflux protein oprM [Bacteroides sp. 2_2_4] Length = 465 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 203/418 (48%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF DT L+ L+ +A+ +N ++ A RI AA+ N+ R++ FPS + R Sbjct: 53 WWKSFQDTKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFFPSIGLNAGWTRQET 112 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + S ++ IP Sbjct: 173 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S+ P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SSGTLPDYMEPIGVGMPVDLLLRRPDVRS 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 291 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLNW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ S K + L+ Sbjct: 346 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 463 >gi|152981317|ref|YP_001351712.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] gi|151281394|gb|ABR89804.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] Length = 475 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 114/439 (25%), Positives = 202/439 (46%), Gaps = 48/439 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLK--WWESFNDTSLNKLVK 66 L +++L GC VGP+Y +P P+ + G + LK WWE F D LN L + Sbjct: 13 LALLILGGCAVGPDYQRPDAPVAQAWKTEAGWQASNPRDGELKGAWWEIFRDAELNALQE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYA--------SISHRFIPNLKTNSTG 118 AL+ T++ A R++ A+ + FP A + + R + N + ++ Sbjct: 73 QALKNGQTMVIAQARVDQARAQANVANSSFFPKIGAQAGSARNRTSAERPLTNYNSQNSS 132 Query: 119 QLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + +D +++DLFG+ RR E + A A A + +L + ++L Y+ R Sbjct: 133 VVQNDFNAAFTVSYELDLFGRVRRQAEGAGATAQQAQADFENTRLVLTAELAADYLVLRQ 192 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 I + Q L K ++ + GA S L L + + + ++ + L+ Sbjct: 193 TDAEIDVLQQTLGAQTKALDFISARHELGAASGLDLNQQQGLTAATQTQLTLLQDQRARY 252 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI----------PADLIRNRPDIR 279 + I+TL+G PA P+ +P+N+ + PA L+ RPDI Sbjct: 253 QNAIATLVGVPA---------------PDFKLPVNLAVTTAPAIPLTAPAALLERRPDIA 297 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+ +A + A+IG+A+S +PSL L+G S A N F WS G IFD Sbjct: 298 AAERAMAAANAQIGVARSAYFPSLGLSGLYGSDANQLSNLFSAPALLWSIGVSATQMIFD 357 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ +N+ A++ Q+ ++++VL A++EV++ L S + +T + A + +S Sbjct: 358 GGRTSANVDFAKAGYQQALGNYRQSVLVAMQEVQDGLNSDVALAQALTSAKVAADSADRS 417 Query: 397 MSLSMINYRQGRYSLLDIL 415 + LS Y+ G + L+++ Sbjct: 418 LGLSTDRYQSGITTNLEVV 436 >gi|157146840|ref|YP_001454159.1| copper/silver efflux system outer membrane protein CusC [Citrobacter koseri ATCC BAA-895] gi|157084045|gb|ABV13723.1| hypothetical protein CKO_02614 [Citrobacter koseri ATCC BAA-895] Length = 471 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/457 (24%), Positives = 219/457 (47%), Gaps = 28/457 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVK 66 +++L GC++ P+Y +P +P+ P QFS+ S+N + W F D + L+ Sbjct: 23 MLVLTGCSLAPDYQRPALPV-PQQFSL--SQNALVSAPAGYQETGWRTFFVDEQVKSLIG 79 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQL 120 AL+ N + AT ++ A+ AD +P + S + LK +S+ L Sbjct: 80 EALRNNRDLRMATLKVQEARAQYRVTDADRYPQLNSDASGSWEGKLKGDSSSTREYEAGL 139 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + + +D FG+ +++ E+ N ++ + +IS + SY + R ++ IA + Sbjct: 140 NLSFDLDFFGRLKNMSEADRQNYFASEEARRAVHILLISNVAQSYFNQRLAYAQLQIAQE 199 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L+ Y ++ + G+T+ L+L + I+S SDI + + + LLG Sbjct: 200 TLENYTRSYAFVEKQLLTGSTTVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG- 258 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 L + + + N+ +P ++ + ++ RPDI E L + A IG A++ Sbjct: 259 -TYSVLPDDRARDSGDIKNVTLPPSLS--SQILLQRPDIMEAEHTLMAANANIGAARAAF 315 Query: 300 YPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS++L ++ + + F + W+F PK+ LPIF+ G+ ++N+ AE Q+ + Sbjct: 316 FPSITLTSGVSGSSSDLSRLFNAASGMWNFIPKVELPIFNAGRNQANLDLAEIRQQQSVV 375 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++ + A KEV +AL +T Q + + ++ + Y+ G S +++LD Sbjct: 376 NYEQKIQTAFKEVADALALRQSLTDQITAQQRYLSSLRITLQRARALYQHGAVSYIEVLD 435 Query: 417 IER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER +T + +DL+ A++ + + L+ A+G G+ Sbjct: 436 AERSLFSTQQTLLDLNYARQ---ANEITLFTALGGGW 469 >gi|146308732|ref|YP_001189197.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina ymp] gi|145576933|gb|ABP86465.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas mendocina ymp] Length = 477 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 116/459 (25%), Positives = 217/459 (47%), Gaps = 31/459 (6%) Query: 17 GCTVGPEYTKPHMPLL---PTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GC++ P+Y +P P+ P + G+ S+ L+W E F D +L +LV++AL+ Sbjct: 17 GCSLIPDYQRPDAPVAADWPQGEAYGSAASEGSRAAADLQWREFFRDPALQQLVQVALEN 76 Query: 72 NLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL----KTNSTGQLDSD- 123 N + A + A + RADL PS A R +L + ++GQ + Sbjct: 77 NRDLRVAALNVEAYRALYRIQRADLLPSVSADGAGTRQRLPADLNQTGEARTSGQYSATL 136 Query: 124 ----WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 W++D FG+ R + E +L L + AQ ++++++ + +Y+ + + + Sbjct: 137 GVNAWELDFFGRLRSLSEQALQQYLATEQAQRST-QISLVASVANAYLQWQADLALLQLT 195 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L ++++ +L+ F G L+L + + + S + ++ + + ++ LL Sbjct: 196 QDTLKTFEESYQLTQRSFDVGVADALALSQARSAVDSARVSLAQYQRLVAQDRNALTQLL 255 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G L Q L + G+PADL++ RPD+ E +L + A IG A++ Sbjct: 256 GTGLPADL----PQGLKLNAELLEQVPAGLPADLLQRRPDLLQAEYQLKAANANIGAARA 311 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS+SL G+ + F + W F P++ LPIF+ G++++N+ AE Q Sbjct: 312 AFFPSISLTANAGTASSQLSGLFDSGSGTWLFQPQISLPIFNAGRLRANLDYAELQKDIQ 371 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++ + A +EV + L + ++ + + ++ + L+ YR G S L + Sbjct: 372 VAQYEKAIQTAFQEVADRLAARTTYRRQLDAQRALLDTTETYYDLAERRYRTGVDSYLTL 431 Query: 415 LDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 LD +R V L IA R LA+ S V+LY A+G G++ Sbjct: 432 LDAQRQLFSVRQQL-IADR-LAQLSSEVELYKALGGGWS 468 >gi|310767259|gb|ADP12209.1| Type I secretion outer membrane protein [Erwinia sp. Ejp617] Length = 450 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 219/461 (47%), Gaps = 33/461 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +V L GC E +P+ PTQ+ +G + WW +FND LN+LV+ A Sbjct: 4 LVVALTGCATHLERAPSSLPI-PTQWRHQVGPGAAV----EAGWWRAFNDPVLNQLVEQA 58 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFI------PNLKTNSTGQ 119 L+ N IL A R++ + + D FP+ A ++ R I P + G Sbjct: 59 LRHNPDILIARSRVDQYRAQLRGAEGDNFPTLDAGMAGSRARAISAVTGQPYQYSVFQGL 118 Query: 120 LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L +++ +DL+G+RR I+++ A L + A A L + S + Y+ E++ + Sbjct: 119 LQANYNVDLWGERRSSIDAAKATLAAQQAAAAAAGLTIASSVASGYMTLASLDEQLRVTE 178 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L +++L+ +F G TS+L ++ ++E ++ ++ IP L+ + +S L+G Sbjct: 179 ATLASRNNSLKLAQRQFETGYTSRLEWLQSQSEYQTAKAQIPLLQHQIAEQENALSILVG 238 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + N+F+ + +P+ L++ RPDI E++L + A + A++ Sbjct: 239 MNPRQI-----ARQNHFEHLAVQTMPAVMPSRLLQRRPDIVQAERQLLAADASLHSARAS 293 Query: 299 LYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 L PSL+L S L DN F WS G + P+ ++ + + + + ++ Sbjct: 294 LLPSLNLTASGTLQSSVLHQLVDNPF----RLWSVGGSILAPLLNREALTAQVDVSMATR 349 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +++ V A EV N L +I ++ +LQ ++ ++++ ++ Y+ G S Sbjct: 350 NQALYNYEKVVRAAFSEVNNDLDAITRYQQQQAELQIQQQVAQEALRIARNRYQNGYASY 409 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 LD LD +R ++ + AK L + +DLY A+G G+ P Sbjct: 410 LDELDAQRTLFTTQLSVVQAKNNLLLAQIDLYRALGGGWQP 450 >gi|241661679|ref|YP_002980039.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12D] gi|240863706|gb|ACS61367.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 579 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 218/473 (46%), Gaps = 44/473 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI--------------GNSKNLINIDT-LKWWESFNDT 59 L+GC VGP++ P P T +S G +++L++ + WW F Sbjct: 115 LSGCAVGPDFKAPAGPAA-TGYSAQPVSRETASAPVVGGEAQHLVDANVPADWWHLFRSP 173 Query: 60 SLNKLVKIALQQNLTILQATERIN---------------AAKENILSVRADLFPSSYASI 104 +L+ LV AL+ + +++QA R+ + + +VR + P ++ Sbjct: 174 ALDALVDEALRASPSVMQAEARLRQAQAEAQAQFGYALPSVDGTVSAVRQQINPEAFGFN 233 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + + P T + + + +D+FG RR +E+S A +D+ +++ A+L++ ++ + Sbjct: 234 TPK--PGPFTLYSASVSVSYALDIFGGVRRALEASQAQVDTQRYELEAARLSLAGNVVTT 291 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + + +I+ ++ +K +E++ + + G +++ + ++ +P L Sbjct: 292 AVRIAALEAQIATTQRLAAKQRKQLEITERRLSVGGVAQVDAFSQRTLVAQTDATMPPLM 351 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 352 QQAAQQRHRLSVLLGREPGAGLPELPSLDALHLPD---PLPVSLPSTLAQRRPDIRAAEA 408 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ A +G+A ++L+P ++L+ GS + N ++ W+ G L PIF G + Sbjct: 409 MWHEASANVGVATANLFPRITLSAGLGSETTSFRNLLGAGSSIWNLGAGLTQPIFHGGTL 468 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ R AE++ +++ VL ++EV +AL ++N D + + A + +++ + Sbjct: 469 RAKKREAEAAYDAAGAAYKQAVLQGLQEVADALHAVNNDAQTLQARALATDQAHQTLRAA 528 Query: 401 MINYRQGRYSLLDILDIERAT--AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S L +LD +R A ++ S A R L + L A+G G+ Sbjct: 529 QARHAAGGISTLTLLDAQRQVDQATLQQVQSQADRLLDSAA--LMQALGGGWQ 579 >gi|332531388|ref|ZP_08407293.1| RND efflux system outer membrane lipoprotein [Hylemonella gracilis ATCC 19624] gi|332039172|gb|EGI75593.1| RND efflux system outer membrane lipoprotein [Hylemonella gracilis ATCC 19624] Length = 482 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/423 (23%), Positives = 202/423 (47%), Gaps = 39/423 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIP 110 WW++F D L+ L++ A ++N I QA R+ A+ + +AD P A + ++R Sbjct: 57 WWKAFQDPVLDDLIERAAKRNTDIQQAAARLTQARALVQGAQADRMPQVGAGVGTNRGAG 116 Query: 111 NLKTNST-------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 T T + +++DLFG+ R +++ + + A + +L V ++L Sbjct: 117 TYTTGDTQPATVVQANVSLSYEVDLFGRLARARDAAGLDAQARAALLQSTQLLVQAELAQ 176 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R +++ Y + L+ ++ G ++L +++++ E+ + E+D+ + Sbjct: 177 TYLSLRATDTELALVRDTAAAYADTLRLTQRRYEAGDVAELDVIRIQTELAATEADVHAI 236 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIGIPADLIRNRPDI 278 ++ H ++ L+G A+ F P +P I GIPA ++ RPD+ Sbjct: 237 RRTRAELEHALAVLVGEAASNF---------TLAPVTGATALPVIPAGIPATVLARRPDV 287 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 + L + A++G+AK+ +PS+ L G + F W+ G +P+F Sbjct: 288 AAAQASLLAAQARVGVAKTAWFPSIMLTAEAGHAGPELGDLFRWSTRAWAVGALASVPLF 347 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ +R AE+ ++++ VLNA++EVE+ L+++ ++ AV ++ Sbjct: 348 DGGRREAGVRGAEAQLDAAGASYRQQVLNALREVEDQLSALRLLQEQSQAQGRAVSAAQR 407 Query: 396 SMSLSMINYRQGRYSLLDILDI-------ERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++S YR G S L++LD R +VE ++RQ + V L A+G Sbjct: 408 ASAISETRYRNGFVSQLELLDARRNELLNRRQAQRVEA----SQRQ---ATVRLIRALGG 460 Query: 449 GYN 451 G++ Sbjct: 461 GWD 463 >gi|225872974|ref|YP_002754433.1| outer membrane efflux protein OprM [Acidobacterium capsulatum ATCC 51196] gi|225791386|gb|ACO31476.1| outer membrane efflux protein OprM [Acidobacterium capsulatum ATCC 51196] Length = 485 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 122/476 (25%), Positives = 209/476 (43%), Gaps = 51/476 (10%) Query: 17 GCTVGPEYTKPHMPLLPT--QFSIGNS------KNLINIDTLKWWESFNDTSLNKLVKIA 68 GCTVGP+Y +P +P+ P+ ++ NS ++ KW F D L KL+ A Sbjct: 20 GCTVGPKYQRPQVPVPPSYRGGAVVNSTPADAKATAASLGAQKWSTVFQDPVLQKLISEA 79 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-----SY------ASISHRFIPNLKTNST 117 + N I A +RI ++ + RA +P+ SY ASIS N NS Sbjct: 80 ITNNYDIRIAAQRILEEQDQLGVTRAQEYPTLSGGASYDTIGLPASISKALNGNNNNNSN 139 Query: 118 G-----------QLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L + W +D +G R E LA+ + +D V+ + Sbjct: 140 NTGRRNIYAGGLSLSAAWNLDFWGYYRSQTRAAREQLLASTWARRMTID----TVVENVA 195 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE-IKSIESDIP 220 +Y R ++I Q + K +++L+ +G L V+ E + ++IP Sbjct: 196 TAYFQLRTLDAELAITRQTVAARKNSLQLTQ-TLERGGNGTLEDVRQAQESLYQATAEIP 254 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ +S LLG L S PN + + G+P L+ RPDI Sbjct: 255 DLERQIAQQEDALSILLGRNPGPILR--GSLSTVDWPNPH-QVPAGLPLQLLERRPDIEE 311 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIF 335 E +L A + +A++ +P LS+ G+ D+S F G N W L IF Sbjct: 312 AEAQLRADNANVDVARARFFPQLSITGNGGT--DSSQFKQLFDGSNILWYVTGSLTQNIF 369 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G +++N+ ++ Q+Q +T+ +T+ A + V ++L ++ ++ + + V K Sbjct: 370 DAGSLRNNLHLTQAEKQQQVLTYSQTIQKAFQNVSDSLIALQRYREYRAQEEKYVAAAKD 429 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ + Y+ G S L++L + + ++ L A+ Q A S+V LY A+G G+ Sbjct: 430 ATRLARMRYKGGATSYLEVLTNDTTYYQAQISLLTAREQEAISFVQLYSALGGGWQ 485 >gi|221200904|ref|ZP_03573945.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221207099|ref|ZP_03580110.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221173173|gb|EEE05609.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221179476|gb|EEE11882.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 513 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L + Sbjct: 32 VGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVFGDPVLDALEEQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 212 DQDLYRRTVELREEALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|188591324|ref|YP_001795924.1| rnd efflux system, outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] gi|170938218|emb|CAP63204.1| RND efflux system, outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] Length = 510 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 212/458 (46%), Gaps = 36/458 (7%) Query: 20 VGPEYTKPHMPL----------LPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVK 66 VGP+Y +P P+ T G+ K D L WW F D L+ L+ Sbjct: 32 VGPDYQRPDAPMSAEFKEASADTATPAWTGDWKPAEPQDALARADWWTVFGDAQLDALMA 91 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 N I A + A ++ + RA FP + AS + N L + Sbjct: 92 EVQISNQNIKAAEAQYRQALASLQAARAGFFPLVDAQAGASRARGASGNTLNGQNATLGA 151 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D++G+ RR +ESS A+ ++ A + L+ + L SY R + ++ + + Sbjct: 152 TWELDVWGRVRRQVESSEASAQASEADLASTLLSTQATLAQSYFLLRVADAQKALLDRTV 211 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y+K+++L ++ G + +++ E ++KS ++ ++ + H I+ L+G P Sbjct: 212 ADYQKSLQLVQNQYAAGTAQRSDVLQSETQLKSAQAQQIDIQITRAQLEHAIAVLVGKPP 271 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 L + P + +P+ L+ RPDI E+++A + A+IG+A++ YP Sbjct: 272 AA-LSLAAGEFRAAPPR----VPAAVPSQLLERRPDIGAAERRMASANAQIGVAQAAYYP 326 Query: 302 SLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +LSL+ S LT S P + WS G L +FD G ++ +A ++ + Sbjct: 327 TLSLSASGGLTASTLARWMSLP--DRIWSIGGGLAGTLFDGGARRAAKAQAVAAYDQTVA 384 Query: 357 TWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TVL A +EVE+ L + + E + +V A+ +++++L YR G LLD+ Sbjct: 385 NYRQTVLGAFQEVEDNLAAQRLLEQEAVVQN--DALRSAREALALVNNRYRAGTAGLLDV 442 Query: 415 LDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 L + + E LSI RQ + V L A+G G++ Sbjct: 443 LTAQTSAYTAERTALSITGRQYTAAVV-LIKALGGGWH 479 >gi|54308751|ref|YP_129771.1| putative outer membrane protein [Photobacterium profundum SS9] gi|46913181|emb|CAG19969.1| putative outer membrane protein [Photobacterium profundum SS9] Length = 517 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 105/436 (24%), Positives = 207/436 (47%), Gaps = 37/436 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW FND +LN LV+ A QQNL + A RI A+ +L + ++S Sbjct: 19 QWWVQFNDPTLNTLVERANQQNLDLESAGLRILQARM-VLGISDSFRYPQVQTVSGNLAR 77 Query: 110 ----PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N N+ D+ W++D++G+ R IES+ A + + A + + + +++ +Y Sbjct: 78 AYNNENSFNNAALSFDAGWEMDIWGKYSRGIESAEAAMYATVASYNNIAVTISAEVARNY 137 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ R F+ERI ++ + +++ ++ + ++ ++F G ++L + + ++++ ++ +P+LE Sbjct: 138 VNYRTFQERILLSKRNIEVQERVVNITQVQFDSGNVTELDIQQAKSQLYGTQAALPSLEI 197 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---------------------IP- 262 + ++ LLG E ++Q + + Y +P Sbjct: 198 GMNQARNALAVLLGVMPFEVEPFLQSDAIEARMKAYNTGYSQANSKRTAASYDNYSLVPR 257 Query: 263 ---INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD----- 314 ++ + A L+ RPD++ E + A+IG+A+S LYPS SL GSI + Sbjct: 258 APGMSTSVDASLVLRRPDLQVAELQAHAQSAQIGVAESALYPSFSLFGSIGVNSTVQSGS 317 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + + + GP IF G++K+N+R ++ QE + + VL A++EV NAL Sbjct: 318 SFSFSDSLTLAAGPSFSWNIFQYGRVKNNVRLEDARFQESLTNYNKKVLVAVQEVSNALE 377 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 S ++ +V ++ ++SM Y G+ + +L+ + E + K Sbjct: 378 SYELYQQQKALRLSSVSSAVRAYNISMTQYENGQITFERLLNSVETMTRSEDSYAQIKGN 437 Query: 435 LAKSYVDLYIAIGSGY 450 +A V LY A+G G+ Sbjct: 438 VANQVVALYKALGGGW 453 >gi|167577931|ref|ZP_02370805.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 493 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 209/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPL---LPTQ---------FSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ PT + S N + W E F D L +L Sbjct: 1 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDIGWREFFVDPRLQRL 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 61 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLDGTGTGTIQRTPAGVSVTGQPLIS 120 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 121 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ ++ ++ V+ Sbjct: 181 LLQVTENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAVNA 240 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 241 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEQTLRAANANI 297 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ A Sbjct: 298 GAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHV 357 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + Y+ G Sbjct: 358 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKNGVD 417 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 418 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 458 >gi|330504948|ref|YP_004381817.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] gi|328919234|gb|AEB60065.1| RND efflux system outer membrane lipoprotein [Pseudomonas mendocina NK-01] Length = 477 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 111/458 (24%), Positives = 216/458 (47%), Gaps = 29/458 (6%) Query: 17 GCTVGPEYTKPHMPLL---PTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GC++ P+Y +P P+ P + G+ S+ + L+W E F D +L +LV++AL+ Sbjct: 17 GCSLIPDYQRPEAPVAADWPQGQAYGSAASEGSRSAADLQWREFFRDPALQQLVQVALEN 76 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYA--SISHRFIPNLKTNSTGQLDSD------ 123 N + A + A + RADL PS A + + + +P N TG+ + Sbjct: 77 NRDLRVAALNVEAYRALYRIQRADLLPSVSADGAGTRQHLPA-DLNQTGEARTSSQYSAT 135 Query: 124 -----WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W++D FG+ R + E +L L + AQ ++++++ + +Y+ + + + + Sbjct: 136 LGVNAWELDFFGRIRSLSEQALQQYLATEQAQRST-QISLVASVANAYLQWQADQALLQL 194 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L ++++ +L+ F G L+L + + + S + ++ + + ++ L Sbjct: 195 TQDTLKTFEESYQLTQRSFDVGVADALALSQARSSVDSARVSLAQYQRLVAQDRNALTQL 254 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG L Q L + G+PADL++ RPD+ E +L + A IG A+ Sbjct: 255 LGTGVPADL----PQGLALNAELLEQVPAGLPADLLQRRPDLLQAEYQLKAANANIGAAR 310 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL G+ + F + W F P++ LPIF+ G++++N+ AE + Sbjct: 311 AAFFPSISLTANAGTASSQLSGLFDSGSGTWLFQPQISLPIFNAGRLRANLDYAELQSDI 370 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + A +EV + L + ++ + + +E + L+ YR G S L Sbjct: 371 RVAEYEKAIQVAFQEVADRLAARTTYRQQLDAQRALLETTETYYDLAERRYRTGVDSYLT 430 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R V L + S V+LY A+G G++ Sbjct: 431 LLDAQRQLFSVRQQLITDRLAQLSSEVELYKALGGGWS 468 >gi|120554265|ref|YP_958616.1| RND efflux system outer membrane lipoprotein [Marinobacter aquaeolei VT8] gi|120324114|gb|ABM18429.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter aquaeolei VT8] Length = 477 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/469 (25%), Positives = 224/469 (47%), Gaps = 45/469 (9%) Query: 8 FSLFIVLLAGCTVGPEYTKP-HMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L VLL GC P +P +PL P + IG +WW +F D LN+LV Sbjct: 6 IALLSVLLTGCASFP--PQPIELPLNPPAHWHIGAGAG--EAVGSRWWYAFGDEELNRLV 61 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------ 119 AL N + + + A + + A L P+ AS S + ++GQ Sbjct: 62 DRALSNNPDLAATAQAVIQADLQLRNAGAALLPTLGASGS---TGKQASEASGQDRVTSG 118 Query: 120 -----LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L D+++DL+G+ E+ +LA + D A++ +++ + ++ + + ++R Sbjct: 119 SSSLGLSVDYELDLWGRLSAAEAGALAGFQGSEYDYDAARMTLVASVASTWFEWQELQQR 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + IA + L+L +K + L ++ G + L + + + ++++++P LE R + + Sbjct: 179 VDIARRNLELGEKTLALVEARYRNGVADRSELSRQQTSVLNLKNEVPPLEYQARQRLAAL 238 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L G YP TE + + + +P IN PA L+ RPD+ +E +L + A Sbjct: 239 RLLTGDYPFTEEIPEAGLLA------VQVPEINPETPASLVTRRPDLAAEEARLMAASAD 292 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 + A++ L PS+SL+G++ + NSF P + L +FD G+ ++N+ Sbjct: 293 VEQARAALMPSMSLSGAVRFST-NSFLSLADPLQTANGLLA--LSQTLFDGGQRRNNVAI 349 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTKLQHAVELHKKSMSLSMI 402 +ES ++ ++L+A +EV +AL +++++++ + L A E ++ L+ + Sbjct: 350 SESRRVALLENYRASLLSAFQEVGDALDREALYLDQEQRLQSILAQAEE----TLRLTEV 405 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G LL +L+ +R LS + + VDLY A+G G+ Sbjct: 406 RYREGADDLLTLLESQRTVFDARQQLSQVRMNRLIAAVDLYKALGGGWQ 454 >gi|156179564|gb|ABU54832.1| outer membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 477 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 113/469 (24%), Positives = 226/469 (48%), Gaps = 29/469 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N+ + + +L + +LL GC++ P+Y +P +P Q + S W + F D + Sbjct: 6 NMTKTLIALSVTLLLGGCSMAPDYQRPELP----QGAAWQSNQAGEAAVSPWRQQFLDPA 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNST 117 L +L+ AL+ N + A + A + RA P+ A+ S + +L + Sbjct: 62 LQQLIATALENNRDLRIAALNVEAYEARYRIQRAAQLPTLAANGSGTRQQGSDDLSSTGQ 121 Query: 118 GQLDSDW---------KIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYI 165 G + S + ++DLFG+ + ++ L++ AQV+ + + +I+ + +Y+ Sbjct: 122 GTISSQYGANIGITSYELDLFGRIQSLKDQA--LENYLAQVETQRSTQIALIASVANAYL 179 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +E ++++ L +++ L+ K+ GA S++ L + ++S + + ++ Sbjct: 180 NLLADQELLALSEATLATEQESYGLTEHKYRLGAASEMELAQGRTALESAKVSLAQYQRQ 239 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + ++ LLG T M + + + L I +G P+ L++ RPDI E L Sbjct: 240 VKQDRNGLALLLG---TGVPALMTEPATLAEVQL-AAIPVGAPSSLLQQRPDILAAEHSL 295 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P++SL GS + F G W+F P++ LPIFD GK + Sbjct: 296 KAANANIGAARAAFFPTISLTATAGSASNQLSGLFDGGTGTWTFMPQINLPIFDGGKRIA 355 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ AE S ++ ++++++ A KEV + L + + +K + Q VE ++ L+ + Sbjct: 356 DLDVAEVSTRQAVASYEKSIQTAFKEVADTLGAQVDYQKQLQAQQALVEANQTYFKLAEV 415 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y +G S L LD +R+ + L + + V LY A+G G+ Sbjct: 416 RYEKGVDSYLTRLDAQRSLFSAKQGLISTRLAQLSNQVALYKAVGGGWQ 464 >gi|330808825|ref|YP_004353287.1| transporter outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376933|gb|AEA68283.1| putative transporter, outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 474 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/479 (24%), Positives = 225/479 (46%), Gaps = 42/479 (8%) Query: 3 ILRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWES 55 + R++ L I +L+GC++ PEY +P P+ Q+ G + N W E Sbjct: 1 MTRSLIGLAISAAVLSGCSLIPEYQRPQAPV-AAQYPQGPAYQATNAADQAAVEQGWREF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLK 113 F+D +L +L++ AL N + A + A + RADLFP+ + AS + + +P+ + Sbjct: 60 FHDPALQRLIQTALINNRDLKVAALNVEAYRAQYRIQRADLFPAIGANASGTRQRLPSAQ 119 Query: 114 TNS-----TGQLD-----SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVIS 158 T S + Q D S +++DLFG+ ++ +E+ L+ + + +++++S Sbjct: 120 TQSGQASISSQYDVNLGISSYELDLFGRIASLSQQALETYLSTAQARRS----TQISIVS 175 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+ + +E + + L Y++++ L+ G S L L + ++ + Sbjct: 176 SVANAYLTWQADRELLKLTENTLGAYEESLRLTARSNQVGVASALDLAQARTSVQGARAS 235 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ + + + LLG L Q + N + G+P+DL+ RPDI Sbjct: 236 LANYQRRVAEDENALVLLLGTGLPADLPEPQSLYGDLLAN----VPAGLPSDLLARRPDI 291 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 E L + A IG A++ +PS+SL G+ + D F + W+F P + LPIF Sbjct: 292 LAAEHSLLAANANIGAARAAFFPSISLTANAGTSSANLDGLFKSGSGSWTFTPTISLPIF 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++++ +E +++ + A +EV + LT+ K V +LQ +L Sbjct: 352 NAGALRASLNYSEIQKDIGVANYEKAIQTAFQEVSDGLTA---RKTYVDQLQAQSDLVNA 408 Query: 396 SMS---LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L+ YR G S L LD +R+ + L + ++ V+LY A+G G++ Sbjct: 409 SQDYYRLAERRYRIGVDSNLTFLDAQRSLFSNQQRLINDRLAQLQAEVNLYRALGGGWD 467 >gi|167588928|ref|ZP_02381316.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 446 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 107/424 (25%), Positives = 202/424 (47%), Gaps = 25/424 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW+ F+D +LN LV AL QN + A R+ A+ + A P + A + Sbjct: 26 RWWQLFDDPALNALVGEALAQNRDLAVAAARVARARAVLDEAGAARLPDTTAGFGVDYGK 85 Query: 108 FIPNLKTNSTGQLDS------------DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 P+ + +D+ W++DL+G+ H ++++ A+ ++ A D ++ Sbjct: 86 HAPDQIVAAAKGIDARTRRGFAPSFAMSWEVDLWGRVGHLVDAARADTEAVQAASDAMRV 145 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ +Y A + ERI +A + + + + L+ + G S L + + A Sbjct: 146 AVAAETTAAYAQACAYGERIDVAERSVAIADRLAALTARQRAHGLVSDLEVARSRAFADD 205 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 +++P L + R ++ ++ L G P M+ ++ P L P +G A L+R Sbjct: 206 TRAELPALAGARRAALYELAVLTGRAPGAIPDAAMRCRAT---PALARPFPVGDGAALLR 262 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG--YNTHWSFGP 328 RPD+R E++LA + A+IG+A + LYPS+ L GS+ + + D S G Y W GP Sbjct: 263 RRPDLRESERRLAAANARIGVATAGLYPSIVLGGSVNWLSTSGDPSSLGDKYAIAWGVGP 322 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + + ++ + +A + ++ VL A+KE E AL + + + L+ Sbjct: 323 MITWRFPNLAASRAQLAQARADDAAARASFDAQVLRALKETEQALARYGAEWRRKSALET 382 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A H ++ L+ +NY G L +LD +R+ V+ L+ + +Q+A + ++ A+G Sbjct: 383 ARAEHARACRLAELNYDAGALDFLGVLDAQRSLVAVDSALAASTQQVALDQIAVFKALGG 442 Query: 449 GYNP 452 G+ P Sbjct: 443 GWQP 446 >gi|152986007|ref|YP_001350570.1| outer membrane protein OprM [Pseudomonas aeruginosa PA7] gi|150961165|gb|ABR83190.1| outer membrane protein OprM [Pseudomonas aeruginosa PA7] Length = 475 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 116/466 (24%), Positives = 209/466 (44%), Gaps = 26/466 (5%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L GCT+ P Y +P P+ + + +D L W D L +L Sbjct: 7 GVSALLIALALGGCTMAPTYERPVAPVADRWSGPAAQRQGVAVDQLDWKGFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL N ++ QA I A+ RAD P AS S R +L + + Sbjct: 67 VSVALDNNRSLRQALLDIEQARAQYRIQRADRVPGLDASASGSRQRQPADLSAGNRSAVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ + Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLSDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAQ 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + ++ L + G + L + + +E E++ R Sbjct: 187 RRLALTRQTLASRESSLALIGQRRAAGTATALDY---QEALGLVEQARAERERNLRQKRQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ + ++ QP L I G P+ LI RPDI E +L A Sbjct: 244 AFNALVLLLGSADAAQTIPRAPGEQPKLLQDIAPGTPSGLIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL G+ + F G + WSF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGNFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + A +EV +AL + + ++ L+ + +++ L+ Y G Sbjct: 364 ARKDSALAAYEGAIQGAFREVADALAASDTLRREEKALRALADTSNEALKLARARYESGV 423 Query: 409 YSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L LD +R + E +D S +RQ+A VDL+ A+G G+ Sbjct: 424 DSHLRYLDAQRRSFFDESAFIDGST-QRQIA--LVDLFRALGGGWG 466 >gi|317403822|gb|EFV84299.1| outer membrane efflux protein [Achromobacter xylosoxidans C54] Length = 454 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/453 (24%), Positives = 206/453 (45%), Gaps = 50/453 (11%) Query: 4 LRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----NSKNLINIDTLKWWESFN 57 +R + SL LAGC++ P Y +P P+ + + G ++ + + W + F Sbjct: 5 MRTLVSLSLAAALAGCSLAPTYERPDAPV-SSAYPSGPAYKADAVGAVATADIGWRDFFA 63 Query: 58 DTSLNKLVKIALQQNLTILQATERINAA-------------------KENILSVRADLFP 98 D L +L++ +L N + A + AA KE ADL P Sbjct: 64 DPLLQQLIEQSLANNRDLRVAALNVEAARAQYRIQRADLLPSVGIAGKETAQRTPADLSP 123 Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAK 153 S AS SH + G S W++DLFG+ R + ES LA LD + Sbjct: 124 SGQASTSHNY-------QVGAALSSWELDLFGRIRSLSDKALESYLA-LDETRTAT---Q 172 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L +I+++ +Y+ R +E +S+ L + +L+ + QG ++ L L + E ++ Sbjct: 173 LTLIAEVANAYLTLRADQELLSLTRDTLKSQDDSYKLTKQSYDQGLSTALDLSQAEVSLR 232 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL 271 + + ++ + + + + L+G P + + + + +P + G+P++L Sbjct: 233 TAQRNLSQYTRQAAQDRNALVLLVGQPLSPEISAALDNAVKLDDGM-LPTALPAGLPSEL 291 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFG 327 + RPDIR E +L + A IG A++ +P++SL G+ A T S G + WSF Sbjct: 292 LARRPDIRAAEHQLKGANANIGAARAAFFPTISLTGN-AGTASASLGGLFDAGSGAWSFV 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P++ +PIF G + + + A+ Q +++T+ +EV +AL + + Q Sbjct: 351 PQITVPIFAGGSLLAGLDLAKVQKNIQVAQYEKTIQTGFREVADALAGRGTLDEQIQAQQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V ++++ LS +RQG L +LD +R+ Sbjct: 411 LLVAANQRAYDLSEQRFRQGIDDYLTVLDSQRS 443 >gi|189353899|ref|YP_001949526.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189337921|dbj|BAG46990.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 511 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L + Sbjct: 32 VGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVFGDPVLDALEEQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 212 DQDLYRRTVELREEALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|221210231|ref|ZP_03583211.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221169187|gb|EEE01654.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 516 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L + Sbjct: 38 VGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVFGDPVLDALEEQ 97 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 98 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNA 157 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 158 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 217 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 218 DQDLYRRTVELREEALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 277 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 278 LAILLGKAPADFA---------FKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMAAA 328 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 329 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 388 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 389 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSR 448 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 449 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 498 >gi|307826239|ref|ZP_07656448.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307732701|gb|EFO03569.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 505 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 211/472 (44%), Gaps = 41/472 (8%) Query: 13 VLLAGC-------TVGPEY-TKP-------HMPL-----LPTQFSIGNSKNLINIDTLKW 52 +LL+ C TVGP+Y TKP P LPT G+ NL +W Sbjct: 1 MLLSACGSSGLLTTVGPDYQTKPLKAAANWQAPQSGENNLPTAHQ-GDPANLN-----RW 54 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR----- 107 W+ FND LN+ + A Q++ ++ A RI A+ N++ A L PS +SI + Sbjct: 55 WQRFNDPVLNRFLAAAQQESASVADARARIEQARANLVGADAALLPSIDSSIGAKRSSSS 114 Query: 108 --FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P + L S W++DLFG R E++ + L+S A A+++V ++ +Y Sbjct: 115 FGGAPFVWNQLPAGLQSSWEVDLFGGLARQEEAARSQLESRNASWHDARVSVAAEAANAY 174 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R+ + ++ I +++ LS + G + + A + + Sbjct: 175 LAYRYCEGQVQIVQADTASRRESARLSEIAGKAGFRAPGDVALANASAAEGNRTLLQQQA 234 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI---PADLIRNRPDIRYQ 281 ++ + + G E + + + L IP I PA ++ RPD+ Sbjct: 235 QCERSIKGLVAMTGLQEPEVRKLLTEAPDRVA-KLPIPPAFRIDSLPARVLLQRPDVASA 293 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDKG 338 E+ +A++ A IG+ ++ +P LSL+G+I T N G W+ GP L LP+FD G Sbjct: 294 ERDVAEASANIGVEQAKRFPKLSLSGNITPTLQNINGGAFLLAQTWAIGPTLSLPLFDAG 353 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K +++ A Q ++ V A+KEVE AL ++ + + + + AV ++ + Sbjct: 354 KRAADVEAARVQYQAAESKFRSKVRTAVKEVEEALVRLDSASQRLPEGRKAVTGYRANFL 413 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G +L+D+ R E+ L +++ +++ LY A+G + Sbjct: 414 AVQQLYQVGLGNLIDVETSRRNVLSAEMALKELEQEQVSAWIALYRAVGGSW 465 >gi|225874883|ref|YP_002756342.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] gi|225793423|gb|ACO33513.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] Length = 517 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 123/490 (25%), Positives = 216/490 (44%), Gaps = 49/490 (10%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGN--------------SKNLINI 47 +L A + + LAGC +GP+Y P P LP + S +++ Sbjct: 13 LLAAATLVSLAALAGCNLGPKYHPPAPPQKLPANYKESTVHFQDAPGWKVAQPSAPMLHG 72 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------- 99 D WW+ F+D LNKL N I Q E A+ + RA +P+ Sbjct: 73 D---WWQIFHDAELNKLEGELNINNQNIKQYFESFLEARALVAEQRASFWPTLTTKPTWN 129 Query: 100 -SYASISHRFIPNLKTN-----STGQ--------LDSDWKIDLFGQ-RRHIESSLANLDS 144 S AS + N T S+GQ D+ W DL+GQ R + ++ Sbjct: 130 RSLASSTMSNTYNTGTGASTATSSGQKSTIMALPFDASWTPDLWGQIRNQVRTAEYASQV 189 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 + AQ+ KL + L Y R I+I Q + +K +++ + G +S Sbjct: 190 SAAQLANEKLTEQASLAAFYFQLRGQDALIAILQQTVAADQKAYDVNLSSYKTGVGDYIS 249 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 +V+ ++ ++S ++ + L+ + H I+ L+G PAT F + F P PI Sbjct: 250 VVEAKSTLESAQAQLTNLQVARAQYEHAIAMLIGQPATSF--SLPPDPGFFTPP---PIP 304 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYN 321 +GIPA+L++ RPDI E+ LA++ A IGI +P+++L+ S T F + Sbjct: 305 VGIPAELLQRRPDIAAAERTLAEANATIGIGYGAFFPAITLSASGGFESSTFSRWFEWPS 364 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 WS GP + IF+ G + + + ++ T+++TVL A ++VE+ L++ + Sbjct: 365 RFWSIGPSISQTIFNGGLYIAQLHQYSATYNADLATYRQTVLAAFQQVEDNLSATRLYSQ 424 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + + + A+ +K ++L Y G L+++ + + L+ + S V Sbjct: 425 QILQQKAALADAQKYLALEQGRYESGIDPYLNVITAQTTVLNDQQTLAQVQVLQMTSAVQ 484 Query: 442 LYIAIGSGYN 451 L A+G G++ Sbjct: 485 LIEALGGGWD 494 >gi|162145978|ref|YP_001600436.1| RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161784552|emb|CAP54087.1| putative RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 506 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 111/469 (23%), Positives = 201/469 (42%), Gaps = 32/469 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT-------QFSIGNSKN---LINIDTLKWWESF 56 I + + L GCTVGP Y P P T +I +S + WW F Sbjct: 25 ILVVLVPGLTGCTVGPTYKAPQPPDAATFGETRSETATIASSSSPYQAAGKPGSDWWRLF 84 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------- 107 + L+ LV ALQ N +I A + A E + + + L P A+ + Sbjct: 85 HSPRLDTLVTEALQSNWSIQAAQANLRKAAEGLHAAQGSLMPQIDATGTEGRQEYGAALF 144 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P S G LD + D+FG R I+ A D+ + D+ L V+ + Sbjct: 145 GPWAWTFPAFSAYSAG-LDVSYDPDIFGSNHRLIQMVGAQKDAERERRDVTMLLVVGDTV 203 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + +A ++I++ ++D ++ + L+ L + G +L +V EA++ +S +P Sbjct: 204 LTAFEAASTADQIAVIRGVIDTDRETLRLATLAWQAGRRPRLDVVTAEAQLAHDQSLLPP 263 Query: 222 LEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L + ++ L G+ PA + + P+ I + +P+DL+ RPDI Sbjct: 264 LINAHEAARTTLAVLTGHSPANWTAPILTLADFSLLPD----IPVVVPSDLVHARPDIIG 319 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 E + + A+IG +DLYP L+L+ + A P W LP+F G + Sbjct: 320 AEAMMRATNAEIGARTADLYPRLTLSAAAAAEGLMGGPA-GAAWRLIGGAALPLFHGGTL 378 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+ ++AE + + +Q V+N +EV ++L + + + A+ +++LS Sbjct: 379 KARKKQAEEDYRIAFDHYQSVVINGFREVADSLNGLKNASTELDNQRQALTSADDALTLS 438 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y+ GR ++L ++ R + A+ ++ + V + +A G G Sbjct: 439 QAGYQAGRGTILQPINARRLFLLARQNTVRAQTEMFRQTVRIMVATGGG 487 >gi|291286175|ref|YP_003502991.1| RND efflux system, outer membrane lipoprotein, NodT family [Denitrovibrio acetiphilus DSM 12809] gi|290883335|gb|ADD67035.1| RND efflux system, outer membrane lipoprotein, NodT family [Denitrovibrio acetiphilus DSM 12809] Length = 468 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 227/465 (48%), Gaps = 31/465 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLKWWESFNDTSLNKL 64 +L + +A C++ PEY +P + L + G NS+ N ++ W + F + L ++ Sbjct: 9 ALLCIAVASCSMMPEYNRPDVQLNKSWSKDGKYALNSEEE-NPASIGWEDYFESSVLKRI 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-------NLKTN 115 + L+ N + A I+AAK +++L P S+ + S +P N T+ Sbjct: 68 ISRTLKNNFDMRLAVLNIDAAKAAYRIQKSELLPTVSAKGAASRESVPADLSSTGNSVTS 127 Query: 116 STGQLD---SDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARH 169 ST + + +++D FG+ R + L++ +A + ++ +I++ +Y++ Sbjct: 128 STFSANLGVTAYELDFFGRVRSLNQKA--LEAYFATQEAKTSTQIALIAETASAYLEYMA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 KE + ++ + D YK+ EL F G ++L + + E+ +S +S++ + + Sbjct: 186 DKEMLKLSKKNYDSYKETYELVKRTFELGDATQLEVAQAESAYQSAKSNVAQYTREVAQD 245 Query: 230 VHNISTLLGYPATEFLHYMQK-QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ ++ L G + L + +S F NL P G+P+ ++ NRPDI+ E L + Sbjct: 246 INAMNLLAGGNVEDLLDDSESIESLRFLGNL--PE--GVPSTVLLNRPDIQSAEHSLKAA 301 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSF-PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG A++ LYP++SL G+ + DN G W+F P + +PIF++G +K+++ Sbjct: 302 NADIGAARAALYPTISLTGAFGVASNELDNILDSGARYAWNFTPSVSIPIFNRGALKASL 361 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + +++ + A +EV + L + + K+ + + ++ KK+ LS+ Y Sbjct: 362 ETAKVKEKIAATEYEKALQTAFREVADQLAARSTYKEQLDAQEALLKSTKKAYDLSLKRY 421 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S L +LD +R+ + + ++ + V LY +G G Sbjct: 422 ENGVNSYLTVLDSQRSLVSAQQTVVATRQAYMTNLVTLYKVLGGG 466 >gi|34498303|ref|NP_902518.1| outer membrane component of multidrug efflux pump [Chromobacterium violaceum ATCC 12472] gi|34104157|gb|AAQ60516.1| probable outer membrane component of multidrug efflux pump [Chromobacterium violaceum ATCC 12472] Length = 467 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 125/462 (27%), Positives = 216/462 (46%), Gaps = 44/462 (9%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--------------WWESFNDTSLNKLV 65 VGP+Y H LP+Q ++G K N L WW ++D L+ LV Sbjct: 16 VGPDY---H---LPSQAALG--KPAANAAFLSASAPAFAQQPVPAGWWRLYDDARLDTLV 67 Query: 66 KIALQQ---------NLTILQATE-RINAAKENILSVRADLF---PSSYASISHRFIPNL 112 AL NL A E +NA ++ SV A + S A + + +P + Sbjct: 68 AEALAANADIRAAAANLRKALAVEASVNAERDPHASVSAAVQRAQDSGEAYLIEKKLP-V 126 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 G L ++IDLFG+ R E++ A ++ A +D+A+ V ++ + +Y+ Sbjct: 127 ANVGDGGLKIGYEIDLFGKLARAEEAARAGTQASEAAMDLARTTVAAETVRAYVQGCAAG 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++++A LDL + + ++ + G + + +A+ + +P L+ Sbjct: 187 HQLAVAKHELDLQNRGVAVAKRMQSAGRGRATDVERAQAQADIQRAALPRLQAEQDAARF 246 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LLG E + + + P L P+ +G A L++ RPD+R E+KLA + A+ Sbjct: 247 RLAALLGKTPAE----LPAAACSDLPRLKRPLPVGDGAALLKRRPDVRAAERKLAAATAR 302 Query: 292 IGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 IG+A + LYPS+SL S +T +++ WS GP + I D G ++ ++ AE+ Sbjct: 303 IGVAAAQLYPSVSLGASAGVTGLLEHAGEDRTRRWSLGPLISWTIPDSG-ARARVKAAEA 361 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A + VLNA++E E ALT +D + L+ A + + + + Y GR Sbjct: 362 EADAALAHFDGVVLNALRETETALTFYAKDLERNADLRSARDNARAAAQDNRRLYAAGRA 421 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +RA A E L+ + Q+A V+L++A+G G+ Sbjct: 422 PYLASLDADRALAGNESALAASDAQVALDQVNLFLALGGGWE 463 >gi|332531378|ref|ZP_08407283.1| RND family efflux pump outer membrane lipoprotein [Hylemonella gracilis ATCC 19624] gi|332039162|gb|EGI75583.1| RND family efflux pump outer membrane lipoprotein [Hylemonella gracilis ATCC 19624] Length = 496 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 113/428 (26%), Positives = 205/428 (47%), Gaps = 36/428 (8%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSVRADLFPSSYAS 103 +DTL W E D L +++ +AL+ N + +T ER+ A + RADL PS A Sbjct: 66 VDTLGWQEFIADDKLRRVIALALRNNRDLRVSTLNVERLQALYQ---VQRADLMPSINAG 122 Query: 104 I--SHRFIPNLKTNSTGQLD-----------SDWKIDLFGQRRHIESS--LANLDSAYAQ 148 + S + P N TGQ S +++DLFG+ R ++ + + L + AQ Sbjct: 123 VGQSAQRTPG-DLNGTGQSTISRQYSGTVGISAYELDLFGRVRSLKDAALMQYLATEQAQ 181 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 A+++++S++ +Y+ +ER+S+A Q L ++ + L+ G +S L L ++ Sbjct: 182 RS-AQISLVSQVSVAYMTLAADRERLSLAEQTLQSRRETLRLTQRMHELGVSSALELRQV 240 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 ++ + S +D+ + +++ ++ L+G P L S L ++ G+P Sbjct: 241 QSTVDSARADVASYSSVVAQDLNALTVLVGAPVASDLLPTAISSAAL--TLTQDLSAGLP 298 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +D++ RPD++ EK L + A IG A++ +PS+SL S +N F WS Sbjct: 299 SDVLLRRPDVQQAEKSLEAANANIGAARAAFFPSISLTASTGYASTDLNNLFKSDQRSWS 358 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKI 382 F P+L +PIF G+ ++N+R +E +++ + A KEV +AL ++ E Sbjct: 359 FVPQLNIPIFSGGRNRANLRVSELDRDIAVAQYEKAIQTAFKEVSDALAQRATLGEQ--- 415 Query: 383 VTKLQHAVELHK-KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 T Q A+ + L+ Y +G L LD +R++ + L A+ + V Sbjct: 416 -TAAQEALAASTLDAFRLARARYEKGIDDYLSTLDAQRSSYTAQQALISARLAQQVNRVT 474 Query: 442 LYIAIGSG 449 +Y +G G Sbjct: 475 VYKVLGGG 482 >gi|73537921|ref|YP_298288.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72121258|gb|AAZ63444.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 489 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 109/468 (23%), Positives = 215/468 (45%), Gaps = 36/468 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPT---------QFSIGNSKNLINIDTLKWWESFNDTSLN 62 + LLAGC++ P Y +P +P+ + ++ + D L W + F D L Sbjct: 11 VALLAGCSLIPSYEQPSLPVAQAYPQGAAYPTADAAAGAQQMRATD-LGWRDFFADARLR 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ 119 +L+++AL N + A + A + RADLFP+ + R +L T Sbjct: 70 RLIEVALDNNRDLRVAALNVEAFRAQYQIERADLFPAIGVAAQETRQRIPADLSTTGRRI 129 Query: 120 LDSD---------WKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDA 167 + S W++DLFG+ R + S A L+ +A + A++ +++ + +Y+ Sbjct: 130 IASQYGVSLGTTAWELDLFGRIRSL--SEAALEQYFASDETRRSAQIALVASVANAYLAL 187 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++++ L Y+++ L+ + +G S+L L + + +++ + + + Sbjct: 188 LADDAQLTLTRSTLANYERSYGLTRRSYEEGIASRLDLRQSQTAVENARASLARYTRLVA 247 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + + LLG + L L + G+P+DL++NRPD+ E +L Sbjct: 248 QDENALVLLLGTGMPDDL----PAPLPLDQKLTADVPAGLPSDLLQNRPDVLAAEHRLRS 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P ++L S A T N G + W F P++ LP+F G ++++ Sbjct: 304 ANANIGAARAAFFPRIALTAS-AGTASNELSGLFKAGSGTWLFQPQISLPLFTAGSLRAS 362 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A+ ++ T+ A +EV + L + + VE + + +L+ Sbjct: 363 LDYAKIQKDINVAQYERTIQTAFREVSDGLAARGTYTSQLEAQVRFVEAAQDAYNLADRR 422 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L +LD +R+ + L +A+++ S V+LY A+G G++ Sbjct: 423 YRTGVDSYLAVLDAQRSLYNAQQLLIVARQEQLTSEVNLYKALGGGWH 470 >gi|50084351|ref|YP_045861.1| putative membrane channel protein [Acinetobacter sp. ADP1] gi|49530327|emb|CAG68039.1| putative membrane channel protein [Acinetobacter sp. ADP1] Length = 489 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 123/472 (26%), Positives = 230/472 (48%), Gaps = 48/472 (10%) Query: 12 IVLLAGCTVG-----PEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSL 61 +VL GC P Y +P + P Q+ +S + +L +WWE + D L Sbjct: 16 VVLFTGCNSNMLMYPPIYQQPIIKADP-QYKYASSFKWVQTQSLISQSSQWWELYQDDKL 74 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN---- 115 N L++ +NLT+ QA R A R P+ A+ + N ++N Sbjct: 75 NFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNESNHQSS 134 Query: 116 ---STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 STG L + W DL+G+ + I+ A++D++ A + KLN SY + R Sbjct: 135 AQFSTG-LQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLD 193 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++++ Q Y +++++ ++ G ++ +++ E ++K +E I +E+ N+ Sbjct: 194 LQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVE--IQHIEQQRERNLQ 251 Query: 232 N--ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADS 288 ++ LLG T+F + KQ+ F ++P I + +P+ L+ RPD+ E++LA + Sbjct: 252 ENILAVLLGQTVTQF--QLSKQTAQF----HLPEIPVQLPSHLLIQRPDVIRAERELAAT 305 Query: 289 VAKIGIAKSDLYP--SLSLNGSIALTHDNSF------PGYNTHWSFGPKLYLPIFDKGKI 340 A++G+A++ P S+ +NGS+ ++N F P Y WS G +FD GK Sbjct: 306 HAQLGLAQTAWLPDVSIGVNGSL---NNNIFLELFQSPNY--LWSIGLGTVATVFDGGKR 360 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+ I +A+++ +E+ T+++ +L KEVE+ L K+ T+ + L ++ + Sbjct: 361 KAEINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVV 420 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S L+++ + + E D L + +RQ+ S + L A+G+G+N Sbjct: 421 TQRYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINS-MQLIAALGTGWN 471 >gi|309778837|ref|ZP_07673608.1| outer membrane efflux lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] gi|308922361|gb|EFP67987.1| outer membrane efflux lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] Length = 501 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 121/466 (25%), Positives = 226/466 (48%), Gaps = 34/466 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQ 70 ++ C VGP+Y +P + P Q+ G+ K D + KWWE FND LN L + Sbjct: 21 ISACAVGPDYKRPDAEV-PQQYKEAGDWKVADPSDAIARGKWWEIFNDPQLNTLEEQVAA 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STG----- 118 N IL A + A+ + S +A FP+ AS S +++T+ STG Sbjct: 80 ANQNILVAEAQYRQAQALVQSAQASFFPTLGASASATRSRSVRTSINPDGSLSTGNPSLL 139 Query: 119 -----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L++ W++DL+G+ RR +ES+ A+ ++ + A L+ + L +Y R Sbjct: 140 NSQNLSLNASWELDLWGRIRRTVESNQASAQASAGDLSSALLSAQAALAQNYFQLRVTDT 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + H Sbjct: 200 QKAVLQRTVADYERFLKLTQNQYAVGVAQRSDVLTAQTQLKQSQALLLDTEVTRAQLEHA 259 Query: 233 ISTLLGYPATEF-LHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G P EF L S P L IP+ + P+ ++ RPDI E+++A + A Sbjct: 260 IAVLIGKPPAEFSLAPATAASAADLPALPAIPLQV--PSAVLERRPDIAAAERRMAAANA 317 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+AK+ +P+LSL S L + + P + WS GP L +FD G + + Sbjct: 318 QIGVAKAAYFPTLSLGASAGLAANTLSRLATLP--SRVWSIGPTLAATLFDGGARAAAVD 375 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L++ YR Sbjct: 376 KAGAAYDASVATYRQTVLGAFQDVEDNLAALRWQTQEFGVQADAVKAAQEAAQLNLNRYR 435 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+++ + E L + + + V L A+G G++ Sbjct: 436 AGTVSFLEVITAQATAYSAERTLLTLQGKQYSAAVLLVKALGGGWH 481 >gi|299145632|ref|ZP_07038700.1| outer membrane efflux protein OprM [Bacteroides sp. 3_1_23] gi|298516123|gb|EFI40004.1| outer membrane efflux protein OprM [Bacteroides sp. 3_1_23] Length = 465 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 203/418 (48%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF DT L+ L+ +A+ +N ++ A RI AA+ N+ R++ FPS + R Sbjct: 53 WWKSFQDTKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFFPSIGLNAGWTRQET 112 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + S ++ IP Sbjct: 173 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYSTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S+ P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SSGTLPDYMEPIGVGMPVDLLLRRPDVRS 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 291 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLNW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ S K + L+ Sbjct: 346 TIFNGGQLVNVTRLAKAQLDEAINQFNQTVLTAVQETDNAMNSYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 463 >gi|169244308|gb|ACA50466.1| putative outer membrane channel protein [Pseudomonas fluorescens] Length = 486 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 114/471 (24%), Positives = 223/471 (47%), Gaps = 30/471 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPT--------QFSIGNSKNLINIDTLKWWESFN 57 AI L L GCT+ P Y +P P+ + S+G + + +I L W + F Sbjct: 7 AIAILLGAGLQGCTLMPAYHRPAAPVDQSWPQGQAYKASSVGAANSAKSIADLHWQQFFR 66 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------FI 109 D ++ +L+ +AL N + QA ++A + R++L P+ S S I Sbjct: 67 DPAMRQLIGVALANNRDLRQAALNVDAYRALYRIQRSELTPTVDVSGSGAKQHLAGDLAI 126 Query: 110 PNLKTNSTGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 P KT + G + + +++D+FG+ + + ES+L S ++ +I+ + + Sbjct: 127 PG-KTGTYGDYELNVGVASYELDVFGRIQSLNESALQTYLSTEEVQRSVQVGLIASVANA 185 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R +E + IA D Y + + + G S LS+ + + + + I Sbjct: 186 YLTWRTDQELLKIAQSTSDTYTRGLNVMQSARAAGTMSDLSVRQARTLVDTARTKILAYT 245 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + ++ LLG T+ Y+ ++++ + I G+PAD++R RPD+R E+ Sbjct: 246 RRVAHDQNALALLLG---TDIPRYI-PDTDDWTQRMIASIPAGLPADILRQRPDVRAAER 301 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ YPS+SL + + + + F G W+F P++ +PIF+ G++ Sbjct: 302 NLIAANANIGAARAAFYPSISLTANAGVASEQLSHLFAGGQGQWTFVPQVNIPIFNGGRL 361 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+N+ AE + + +++++ A EV + L S + + + + + + L+ Sbjct: 362 KANLDYAEIQKDIRVVAYEKSIQTAFSEVADGLASAGLYDEQLQAHRDLAQDNNAYLDLA 421 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +R G + L +LD +R +L + +S V LY A+G G++ Sbjct: 422 LNRFRHGVGNFLPVLDAQRNLFAAREELVGNRLLQLQSQVQLYRALGGGWD 472 >gi|161519924|ref|YP_001583351.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160343974|gb|ABX17059.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] Length = 517 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L + Sbjct: 38 VGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVFGDPVLDALEEQ 97 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 98 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNA 157 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 158 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 217 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F +G S+L + + + E+ S ++D + + + H Sbjct: 218 DQDLYRRTVELREEALKLVQRRFNEGDISELDVSRAKNELASAQADAVGVARRRAASEHA 277 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 278 LAILLGKAPADFA---------FKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMAAA 328 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LP+FD G+ Sbjct: 329 NARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 388 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 389 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSR 448 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 449 TQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 498 >gi|104782381|ref|YP_608879.1| outer membrane protein OprM [Pseudomonas entomophila L48] gi|95111368|emb|CAK16088.1| Outer membrane protein oprM precursor [Pseudomonas entomophila L48] Length = 476 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 107/459 (23%), Positives = 222/459 (48%), Gaps = 30/459 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLL---PT--QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +LAGCT+ P+Y +P P P+ +S G S + + L+W F+D L +L+ Sbjct: 11 TVLAGCTLAPDYQRPDAPSADHYPSGVAYSGGPSASAL---PLEWQAVFHDPVLRQLLDT 67 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDSD-- 123 A+ N + A + + RA+L P ++ A +++P +T S G + S Sbjct: 68 AMANNRDLRVAALNVEGYRAQYRIQRAELLPKVAANAQGQRQYLPRSRTGSKGMISSQQS 127 Query: 124 -------WKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +++DLFG+ R + ++ L L S A+ A+L++++ + +Y+ R +E + Sbjct: 128 ATVGISAYELDLFGRLRSLSDQALLTYLASDEARRS-AELSLVTSVAGAYLTWRADQELL 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +++ Q L ++++ L+ + G S L ++ + S + + + +++ ++ Sbjct: 187 ALSTQTLQADEQSLRLTQRQHRTGTLSALDAIQATTRVDSSRAAVARYTRLAAQDLNQLN 246 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + L + + + G+PADL++ RPDIR E +L + A IG Sbjct: 247 RLVGVEVSATLPALPLADDQI-----ARVPAGLPADLLQRRPDIREAEYQLRAANANIGA 301 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L G+ + + F + W F P++ LP+F+ G +++++ A+ Sbjct: 302 ARAAFFPSITLTANAGASSRQLADLFDAGSGTWLFQPQINLPLFNAGSLRASLDYAKVQK 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q +++++ +A +EV + L + ++ + + V ++ L+ YR G S Sbjct: 362 NIQVARYEKSIQSAFQEVADGLAARATFQRQLQAQRDLVAASQRYHDLAEHRYRTGIDSS 421 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L LD +RA + L + + V+L+ A+G G+ Sbjct: 422 LTFLDAQRALFNAQEGLINDRLAQLLAEVNLFAALGGGW 460 >gi|83717404|ref|YP_440292.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|167617017|ref|ZP_02385648.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] gi|257140923|ref|ZP_05589185.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83651229|gb|ABC35293.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 510 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 216/470 (45%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D +L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKTAEPADDAHRGEWWRVFGDPALDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSPASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L ++ ++L +F++G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVELREEALKLVQRRFSEGDISELDVSRAKNELATAQADSVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F+ +P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFKETPIVPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + GS A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGSFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S L+++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLEVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|313107248|ref|ZP_07793445.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa 39016] gi|310879947|gb|EFQ38541.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa 39016] Length = 482 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 115/472 (24%), Positives = 212/472 (44%), Gaps = 24/472 (5%) Query: 1 MNILR----AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 MN +R + +L I L L C++ P Y +P P+ + + IDTL W Sbjct: 1 MNEMRKPAFGVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSF 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL 112 D L +LV +AL N ++ Q I AA+ RAD P A+ + R +L Sbjct: 61 IVDAELRRLVDVALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADL 120 Query: 113 KTNSTGQLDS---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ S ++++DLFG+ + + +++L ++ A++ +++++ Sbjct: 121 SAGNRSEVASSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQ 180 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R+++ Q L + + L + GA + L + + +E Sbjct: 181 AYLSYDGALRRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQ 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E++ R + L+ ++ +S +P L I G P++LI RPDI E Sbjct: 238 ERNLRQKQQAFNALVLLLGSDDAAQAIPRSPGRRPKLLQDIAPGTPSELIERRPDILAAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L A IG A++ +P +SL GS + F G + WSF P L LPIFD G+ Sbjct: 298 HRLRARNADIGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGR 357 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++N+ AE+ ++ T+ A +EV +AL + + ++ L+ +++ L Sbjct: 358 NRANLSLAEARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKL 417 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y G + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 418 AKARYESGVDNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 469 >gi|171315746|ref|ZP_02904979.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171099158|gb|EDT43934.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 511 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 116/475 (24%), Positives = 216/475 (45%), Gaps = 55/475 (11%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDVSTPAAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLESQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---------NLKTNSTG 118 AL N + A R+ A+ + R+ FP + F P L+ TG Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQ----VGAGFGPTRQGLSSASQLQPQGTG 147 Query: 119 QLDSD-WKI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ W+ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 148 PTNATLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELR 207 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + ++L + ++L +F +G S+L + + + E+ + ++D + + Sbjct: 208 QLDSDQDLYRRTVELRDQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAA 267 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKK 284 + H ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ Sbjct: 268 SEHALAILLGKAPADFA---------FKETPIVPVAVKVPAGLPSALLERRPDVSAAERA 318 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDK 337 +A + A+IG+AKS +P L + G+ A T N F + + GP L LP+FD Sbjct: 319 MAAANARIGLAKSAYFPKLDITGAFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDG 378 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + +++A + EQ +++ VL A +EVE+ L + + AV +++ Sbjct: 379 GRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAA 438 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +LS Y++G + LD++D ER+ + ++ + A S V+L A+G G+ P Sbjct: 439 TLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWGP 493 >gi|39937167|ref|NP_949443.1| putative outer membrane efflux protein OprN [Rhodopseudomonas palustris CGA009] gi|39651025|emb|CAE29548.1| putative outer membrane efflux protein OprN precursor [Rhodopseudomonas palustris CGA009] Length = 442 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 36/421 (8%) Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP------NLKT 114 +L++ AL + +I R+ A+ + A+L PS + + H IP L+ Sbjct: 11 ELIERALADSPSIQIVEARVRQARASAREQYANLLPSGSVAGAYLHNRIPLGDARRGLEN 70 Query: 115 NSTGQ------------------LDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLN 155 + GQ D+ W+ID+FG R R E ++A D+A A+ A + Sbjct: 71 VAGGQAIAGQIPDGTNLDLYDANFDASWEIDIFGGRQRAAEQAVAQADAAVARFADAHVQ 130 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ SY+ R + R+ + Q + L ++ I+L+ + G TS L L +L ++ S Sbjct: 131 LAAQVAQSYVGLRDAQHRLDLTLQSVKLQQEAIDLTAQRLGGGTTSDLDLERLRTQLAST 190 Query: 216 ESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E+ L + N ++ L+G P T Q + P P+ IG PA ++R Sbjct: 191 EAMADPLRATIDQNRGQLAVLVGLEPGT---LDSQLRRPRPVPVPPRPLRIGDPAGMLRR 247 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKL 330 RPDIR E+ LA + A+IG A + +P ++L G++ + S + T S GP L Sbjct: 248 RPDIREAERNLAATNAQIGQAVAGYFPRVTLLGNVG-SLSTSTAVFGTAGSLIGNVGPTL 306 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 + D G+ + IR+AE+ + +Q TVL A+++ E++L+ + VTKL A Sbjct: 307 QWNVLDFGRTLARIRQAEAGSDAAIAQYQNTVLTALQDAESSLSRFGHQRNQVTKLARAS 366 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K+ L R G S++D+LD+ER + L+ A+ QL Y+ L ++G G+ Sbjct: 367 ASADKAAELMRQRNRAGTVSVIDLLDVERQRLQTVQSLAQAQAQLMNDYIALQKSLGLGW 426 Query: 451 N 451 + Sbjct: 427 S 427 >gi|167579532|ref|ZP_02372406.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 508 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 218/470 (46%), Gaps = 47/470 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-IDTL---KWWESFNDTSLNKLVKI 67 + L+ GC+ P Y P + + P F + L D + WW + D +L+ L Sbjct: 13 VALVTGCSFAPVYRTPDVDM-PVAFKEAGAWRLATPADRMPRDAWWSVYRDPTLDALEPK 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFI---------PNLKT 114 + N + A R + A + RA LFP+ + AS + + P++ Sbjct: 72 VAEANPDVAAAVARHDEAAAYLDEARAGLFPTIGVTADASTNRQSARRPLRGANQPSVYG 131 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 ++T + + +DL+G+ R +++ L ++ + A+L++ + L +Y R ++ Sbjct: 132 SNTAEAGIGYDLDLWGKVRNEVKAGRDELQASADDLASARLSLQASLADAYFHLRGLDQQ 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + Y++ + L+ + G S L + + + ++ S + + + H I Sbjct: 192 QQLLSDTIRTYERALALTMSRHAGGIASDLDVSRAQTQLDSARASAEDVRAWRALYEHAI 251 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 +TL+G PA+ F P+L ++P I G+PA L++ RPD+ E+++A++ Sbjct: 252 ATLIGVPASSF---------TLAPSLARAHLPSIPAGVPAALLQRRPDVAAAERRVAEAN 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 AKIG+AK+ +P LSL + D P N WS GP L + +FD G+ + +R Sbjct: 303 AKIGVAKAAFFPDLSLGLAGGFQSDTLSPWIAAPNEIWSVGPSLAMTLFDGGRRAAATQR 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + E ++ VL A ++VE+ L ++ T+ A+ ++++ LS YR Sbjct: 363 ARAKLAESGARYKAVVLQAFEQVEDNLALLHHLGDEATREHEALRAAQRALELSTSRYRD 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIA------KRQLAKSYVDLYIAIGSGY 450 G S LD++ + E+D+ IA +R LA V L A+G G+ Sbjct: 423 GVVSYLDVV----TSQTTELDIEIAALDLDTRRVLAS--VRLIEALGGGW 466 >gi|104782183|ref|YP_608681.1| outer membrane protein OprJ [Pseudomonas entomophila L48] gi|95111170|emb|CAK15890.1| Outer membrane protein oprJ precursor [Pseudomonas entomophila L48] Length = 465 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 111/456 (24%), Positives = 208/456 (45%), Gaps = 28/456 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LAGC++ P Y +P P+ Q+ + ++ L W D +L +LV AL N + Sbjct: 14 LAGCSLAPTYQRPEAPV-AAQWGDAAAHQGRAVEQLDWQAFIVDPTLRQLVATALDNNRS 72 Query: 75 ILQATERINAAKENILSVRADLFPS--SYASISHRFIPNL-------KTNSTGQLD---S 122 + Q I A+ RAD P + AS + + +P NST Q+ Sbjct: 73 LRQTLLDIEQARAQYRIQRADRVPGLNAGASGNRQHLPAALASDGREGVNSTYQVGLSLP 132 Query: 123 DWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++++DLFG+ + + E LA ++ A A++ +++++ +Y+ + R ++ Sbjct: 133 EYEVDLFGRVKSLSDAALEQYLATEEAGRA----ARVALVAEVSQAYLTLDGAERRQALT 188 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L + ++ L + G + L + ++ +++ T + R + + LL Sbjct: 189 RQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELETTVRQQRQAFNALVLLL 248 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G ++E + + + P + I G P+ L+ RPDI E +L A IG A++ Sbjct: 249 G--SSEAAKAIPAE-RSAAPMVLQEIAPGAPSALLERRPDILAAEHRLRARNADIGAARA 305 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P +SL GS + F G + WSF P+L LP+FD G+ K+ + AE+ Sbjct: 306 AFFPRISLTGSFGTSSAQMSGLFEGGSRSWSFMPQLSLPLFDAGRNKAGLSLAEARKDSA 365 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ T+ A +EV +AL + + ++ + + + +++L+ Y G + L Sbjct: 366 VAAYEGTIQTAFREVADALAATDTLRREEAARRALADTSQATLALAKARYEGGVDNHLRY 425 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R+ E A Q + VDL+ A+G G+ Sbjct: 426 LDAQRSNYVNEATYIEASTQHQLALVDLFRALGGGW 461 >gi|326317838|ref|YP_004235510.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374674|gb|ADX46943.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 524 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 208/459 (45%), Gaps = 60/459 (13%) Query: 18 CT-VGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESF-NDTSLNKLVKIA 68 CT + P + KP +P+ P + +++ ++ L WESF + L ++ + Sbjct: 30 CTNLAPPFWKPALPV-PEEVGTPSTRGTDSVTMTGVVDIGLGPWESFITEPRLRGVITQS 88 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL----KTNSTGQLD 121 L+ N + A I A+ RADLFP+ + A R +L + N+T Q Sbjct: 89 LEANRDLRMAVLAIERARAQYGVSRADLFPTVAATGAGTRARTADDLTAAGRANTTSQYS 148 Query: 122 -----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + ++ID FG+ R++ +++L +L+++S + +++ R+ Sbjct: 149 AQIGFTSYEIDFFGRIRNLNDAALQEFLRVGDNARSVRLSLVSDVAGAWLTLDADARRLL 208 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + L +++ L+ + QGATS L+L + +A + + +D+ + + + + Sbjct: 209 LARETLRTRSQSLALARRSYEQGATSGLTLTQTQATVDTARADLASAATQLAKDRNALHL 268 Query: 236 LLGYP---------ATEFLHYMQKQSNNFQPN----------------------LYIPIN 264 L G P A E L ++ P L +P Sbjct: 269 LAGRPVDDALLPPAAVEALAPPPAETGASAPGGDRAGSPDPARWQRPTVSVAQALAVPAG 328 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---- 320 +P+ + RPD++ E+ L S A IG A++ +PS++L S+ T N G Sbjct: 329 -SLPSSALLRRPDVQAAERSLRGSFANIGAARAAFFPSITLTTSVG-TASNELSGLFGAG 386 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 N WSF P++ LPIFD G+ ++N+R AE + + +++TV A +E +AL + Sbjct: 387 NGIWSFAPQIRLPIFDGGRNQANLRVAEVAQETALAQYEKTVQAAFREAADALAERATLQ 446 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + Q V+ ++++ L++ +R G S L +LD +R Sbjct: 447 ERLQAQQSLVDSSQRALDLTLARWRLGADSYLAVLDAQR 485 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/179 (20%), Positives = 82/179 (45%), Gaps = 9/179 (5%) Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDN--SFPGYNTHWSFGPKLYL 332 D+R + + A+ G++++DL+P+++ G+ A T D+ + NT + ++ Sbjct: 94 DLRMAVLAIERARAQYGVSRADLFPTVAATGAGTRARTADDLTAAGRANTTSQYSAQIGF 153 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETV----LNAIKEVENALTSINEDKKIVTKLQH 388 ++ IR +A ++++ + L+ + +V A +++ D + + + Sbjct: 154 TSYEI-DFFGRIRNLNDAALQEFLRVGDNARSVRLSLVSDVAGAWLTLDADARRLLLARE 212 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + +S++L+ +Y QG S L + + DL+ A QLAK L++ G Sbjct: 213 TLRTRSQSLALARRSYEQGATSGLTLTQTQATVDTARADLASAATQLAKDRNALHLLAG 271 >gi|329114899|ref|ZP_08243655.1| secretion system type I outer membrane efflux pump lipoprotein [Acetobacter pomorum DM001] gi|326695796|gb|EGE47481.1| secretion system type I outer membrane efflux pump lipoprotein [Acetobacter pomorum DM001] Length = 508 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 122/488 (25%), Positives = 226/488 (46%), Gaps = 55/488 (11%) Query: 5 RAIFSLFI---VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN--------LINIDTLKWW 53 R LF+ +LL+ CTVGP Y +P +P F ++ N + +WW Sbjct: 8 RRRLGLFLATSMLLSACTVGPNY-QPDRMKVPAAFKETEEEHPATPEEIERTNKEMTEWW 66 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIP 110 F D L +LV A++ N + A +RI A + A +P A++ R+ Sbjct: 67 SLFKDPILTRLVDDAIKGNYDLQIAGQRILAERAIRDRSAAQWYPQMDANMGGGDVRYSI 126 Query: 111 NLKT------NSTGQLDSD---------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 N+ N Q ++ W++D+FG+ RR +E+ +++ + Sbjct: 127 NIDNWPIRPGNPANQPEASMLTYGVMASWELDMFGRIRRDVEAHEHQVEANIEGRRALLM 186 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++S+L Y+ R + +I IA + + K ++L++ + +G + L + + +AE+ + Sbjct: 187 GLLSELASDYMLLRVTQLQIKIATDNIRVAKDALDLTNKLYLEGVGNTLQIAQAQAEMDA 246 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI------- 267 + L+ H I+ LLG K + L IP + I Sbjct: 247 QIAAREPLKTRVSQVTHAIAVLLG-----------KMPGELEEELKIPRPLPIVPEFPAT 295 Query: 268 -PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP----SLSLNGSIALTHDNSFPGYNT 322 P+ +I NRPDIR E++ A + A+IG+A ++LYP L+ N + + + +F Sbjct: 296 LPSIVIANRPDIRMAERQYAVATAQIGVAVANLYPHFVVPLTFNPNASAMY-QAFQANAM 354 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W F +P+ GK+ + +R A+++A+ +T+++TVL KEVE+A+ + ++D + Sbjct: 355 SWQFLLMASMPLMHGGKMTAEVRAAQAAAEAARLTYRQTVLQGFKEVEDAMAAWHDDIEY 414 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +L A E + + Y G L++L ER T + ++AK + + V+L Sbjct: 415 AEQLHKAAEDSATASERARKLYGAGLVGFLEVLTTERTTLNAQNMEALAKLERLRDAVNL 474 Query: 443 YIAIGSGY 450 Y A+G+G+ Sbjct: 475 YTALGAGW 482 >gi|239817793|ref|YP_002946703.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239804370|gb|ACS21437.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 474 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 38/461 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC++ P Y +P P+ PT F + W E F D+ LN L++ AL+ N + Sbjct: 18 GCSLIPTYERPAAPV-PTTFPGDPAQPAGQAAAAVPWEEFFTDSRLNGLIRTALENNRDL 76 Query: 76 LQATERINAAKENILSVRADLFP--------------------SSYASISHRFIPNLKTN 115 + I A+ RA LFP SS S+S ++ NL Sbjct: 77 RVSVLNIEQARAQFQIERAALFPALGLTGSGSRSSPNPYQAFDSSAGSVSSQYSVNLGVT 136 Query: 116 STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + W+ID FG+ R + + +LA + A++++I+ + ++ E + Sbjct: 137 A-------WEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVATGWLTLIADDELL 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + Q L ++++ L+ ++F G +S+L + ++ + +++ + + ++ Sbjct: 190 ELTRQTLVTREESVRLTKMRFDNGVSSELDFQAANSLAETARASYAQQQRTRMQDENALA 249 Query: 235 TLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG P + K ++ +P +P G+P+DL+ RPDIR E++L + A IG Sbjct: 250 LLLGAPVPADATAGGIKGLDSVKPMPDVPA--GLPSDLLAERPDIRAAEQQLIAANANIG 307 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A+++ +P +SL ++ T + F G + WSF P + LPIFD G+ ++ + A++ Sbjct: 308 AARANFFPRVSLTTTLG-TASSEFSGLFDRGSRAWSFAPSVTLPIFDAGRNRATLDSAKA 366 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +++++ A +EV +AL + V + + LS + YR G Sbjct: 367 GREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQADAEAVRFRLSDMRYRNGIA 426 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S LD+LD +R+ + + ++ V LY +G G+ Sbjct: 427 SALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGW 467 >gi|78059968|ref|YP_366543.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77964518|gb|ABB05899.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 491 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 116/456 (25%), Positives = 220/456 (48%), Gaps = 35/456 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQNLTIL 76 VGP+Y P P S ++ + D + WW +F DT L+ LV+ A+ N + Sbjct: 31 VGPDYVSPQSTHPP---SWSAPRDTVTTDPAQLQNWWRTFGDTQLDALVEQAIAHNQDLA 87 Query: 77 QATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLKTNSTGQL--DSDWK 125 A +R+ A+ + + L P+ A S + + P + + T +L D+ W+ Sbjct: 88 IARQRLLQARAERDQIASRLGPTVTAGGNADALRSSRALDWPPGIGQSRTYRLGFDASWE 147 Query: 126 IDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DLFG RR +ES+ A LD+ ++++++L Y R +ER+ IA + Sbjct: 148 LDLFGGTRRAVESADAQLDALDDDRHAILVSLLAELASDYAALRATQERLRIATDNVASL 207 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATE 243 L+ +G + ++ + AE++ ++ +P L + H I L+G +P T Sbjct: 208 DATRRLTEQSNRRGLGTSFAVAQARAELQLAQATLPPLHQDVARFAHAIGVLVGGFPET- 266 Query: 244 FLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + P +P+ + +P+D+IR RPDIR E++LA + A+IG+A+++ Sbjct: 267 ------LRDTLSAPGATLPVAPALPVTLPSDVIRERPDIRAAERRLAAATAQIGVARAEQ 320 Query: 300 YP----SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P LSL + +L D F G + WS ++D G+ K+ + A ++A+ Sbjct: 321 FPHFAIPLSLGTTASLVQD-LFSGASVAWSVALDGTQTLYDGGRAKAGVDAARAAAEAAR 379 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + +++ + +A ++VE+AL +I + L AV+ + + S + YR G L +L Sbjct: 380 LAYEQRIRSAFRDVEDALVAIGAARDQQAMLAAAVDSSQDAQSRATRLYRNGLGEYLSVL 439 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +RAT + L++++ + + LY ++G G+ Sbjct: 440 TAQRATYRARDALALSRLAQVQGAIALYKSLGVGWR 475 >gi|107099739|ref|ZP_01363657.1| hypothetical protein PaerPA_01000757 [Pseudomonas aeruginosa PACS2] Length = 482 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 115/472 (24%), Positives = 212/472 (44%), Gaps = 24/472 (5%) Query: 1 MNILR----AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 MN +R + +L I L L C++ P Y +P P+ + + IDTL W Sbjct: 1 MNEMRKPAFGVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSF 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL 112 D L +LV +AL N ++ Q I AA+ RAD P A+ + R +L Sbjct: 61 IVDAELRRLVGVALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADL 120 Query: 113 KTNSTGQLDS---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ S ++++DLFG+ + + +++L ++ A++ +++++ Sbjct: 121 SAGNRSEVASSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQ 180 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R+++ Q L + + L + GA + L + + +E Sbjct: 181 AYLSYDGALRRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQ 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E++ R + L+ ++ +S +P L I G P++LI RPDI E Sbjct: 238 ERNLRQKQQAFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L A IG A++ +P +SL GS + F G + WSF P L LPIFD G+ Sbjct: 298 HRLRARNADIGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGR 357 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++N+ AE+ ++ T+ A +EV +AL + + ++ L+ +++ L Sbjct: 358 NRANLSLAEARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKL 417 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y G + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 418 AKARYESGVDNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 469 >gi|289665619|ref|ZP_06487200.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 497 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 218/488 (44%), Gaps = 51/488 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLN 62 +L +LL GC +GP YTKP + + +++ L WWE +D +L Sbjct: 10 VALSTLLLGGCMLGPNYTKPPAVADAAIQAPALHRASGADVVAAAPLNHWWEELHDPTLT 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-------- 114 +LV AL + + A R+ A + RA+ P AS + + +T Sbjct: 70 QLVTQALADSPNLRAAQARLRANRALAQQRRAERLPKLNASALYAYAEPPQTIVDTLGGL 129 Query: 115 ------------------------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQV 149 S G D+ W++D FG+RR E +LA ++ A++ Sbjct: 130 QQQGQPGQSPAAGNQALDLEKAQIYSAG-FDASWELDFFGRRRRAAEGALAQAQASEAEL 188 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 A++ + +++ Y++ R + R++IA L ++ ++L + QGA S L + ++ Sbjct: 189 ADAQVQLAAEVGQVYLNYRGLQARLAIADANLGKIRQTLQLVQQRRGQGAASDLQVEQIA 248 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI- 267 +++ E+ LE + + ++ ++G P + Q QP +P + + Sbjct: 249 TQVQQQEAQRLPLEMQLQEALDQLALMVGREPGA-----LDAQLATPQPLPMLPTQVRVD 303 Query: 268 -PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF 326 LIR RPD+R E++LA S A+IG A + +P +SL G ++ S +N+ Sbjct: 304 DAGALIRRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALT 362 Query: 327 G---PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P L IFD GK ++ + +A + + ++ TVL A+++ +AL +K + Sbjct: 363 TLAVPMLRWSIFDFGKTRAQVEQARAGNAGRAAAYEGTVLAALQDANSALARFGSARKQL 422 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + A +S L G S +D+LD++R + + A+ QL +YV L Sbjct: 423 VVARQAEASATRSAGLMQQRRDAGATSSIDVLDVQRQQLSAQDAAAQAQVQLLVNYVALQ 482 Query: 444 IAIGSGYN 451 ++G G++ Sbjct: 483 KSLGLGWS 490 >gi|218530696|ref|YP_002421512.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium chloromethanicum CM4] gi|240139070|ref|YP_002963545.1| putative outer membrane lipoprotein precursor [Methylobacterium extorquens AM1] gi|218522999|gb|ACK83584.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium chloromethanicum CM4] gi|240009042|gb|ACS40268.1| putative outer membrane lipoprotein precursor [Methylobacterium extorquens AM1] Length = 500 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 200/428 (46%), Gaps = 34/428 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLK------------ 51 A L +GC VGP+Y++P + P F G + +L + K Sbjct: 10 ATVCAVAALTSGCLVGPDYSRPSVET-PLGFKQGGMREDSLAYVQAQKGWRPAAPNDAAE 68 Query: 52 ---WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---IS 105 WW +FND +L++L++ N + + A+ + RA LFP+ + Sbjct: 69 RGDWWRAFNDPTLDRLIRSIDVDNQNLRAQVAVYDQARALVAQARAALFPTVIGAPGITR 128 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 R + +T + Q ++W++DLFG RR IES +A+ ++ + + + +L++ ++L +Y Sbjct: 129 SRALGAERTTVSLQGQANWELDLFGGIRRQIESDVASAQASASDLALVRLSLQAELATNY 188 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R+ + + ++ +K+++ ++ ++ G ++ ++ + ++++ ++ + ++ Sbjct: 189 LQLRYQDSLKRVLEENVEGFKRSLSIAENQYNAGVAARSDVITAQTQLQTTQASLIAVDL 248 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQE 282 H ++ L G P +E F P P + +GIP+DL+ RPDI E Sbjct: 249 QRATFEHAVAILTGRPPSEV-------KLPFAPLPVRPPSVPVGIPSDLLERRPDIAGAE 301 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + + +IG+A S YP+++L+ S T + F N WS FD G Sbjct: 302 RLVQAQSEQIGVAVSAFYPTVTLSASGGFSGATSNGVFSAANRVWSIAANGSQVFFDGGA 361 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + ++ A ++ + +++TVL A EVEN L + + K AV ++++ + Sbjct: 362 RAAVLQTARAAYEAAVANYRQTVLTAFGEVENGLAGVRILARQQAKQDEAVASARRAVEI 421 Query: 400 SMINYRQG 407 ++ YR G Sbjct: 422 TLNEYRAG 429 >gi|170692766|ref|ZP_02883928.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170142422|gb|EDT10588.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 507 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 220/470 (46%), Gaps = 44/470 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTSLNKLVK 66 V+LA CTVGP+Y +P + P + S ++ D WW + D +L L Sbjct: 27 VMLAACTVGPDYKRPQAEVPPAWNTDSYWRVAAPSHAPMDPD---WWNVYRDATLASLET 83 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF------------IPNLK 113 AL QN T++ A+ AK + + RA P A+ + RF +P + Sbjct: 84 QALAQNQTLVAASAHYEQAKATLANTRAQQVPEVDLAASASRFRISADRPRTNYALPTMS 143 Query: 114 T-NSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T + Q+ ++ DLFG+ RR +E + A+ + + + A+L + +++ Y R Sbjct: 144 TVQNNLQIGPTINYDTDLFGRIRRQVEGATASAEQSADDLANARLVLTTEVATDYFSLRE 203 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 I + +Q + L +K ++ + + GA S L +++ ++ + + L Sbjct: 204 LDTEIDVLNQSVKLQQKALDYVNAEHDLGAVSGLDVLQQKSLLDTTRVQAQLLLNQRAQY 263 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNRPDIRYQEKKL 285 H I+ L+G PA +F +P + +P I +G+P+DL++ RPDI E+ + Sbjct: 264 EHAIAALVGVPAPQFA---------IEPKVLSFPVPAIALGVPSDLLQRRPDIASAERAM 314 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNT-HWSFGPKLYLPIFDKGKIKS 342 A + A+IG+AK+ +PSL+L I T S T W+ G +FD G+ + Sbjct: 315 AAANAQIGVAKAAFFPSLTLTPGIGWESTQFASLLSAPTLMWTLGAAAGQVLFDGGRRAA 374 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N++ A + +++TVLNA ++V++ +T + + + AV ++ + L+ Sbjct: 375 NVQFASEGYKATEANYRQTVLNAFQQVQDGITGLAVLDGAAKQSEEAVADSERLLGLAND 434 Query: 403 NYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + L+++ +++ + D I +Q+ S V L A+G G+ Sbjct: 435 RYSGGLVAYLNVITAQQSLLNSKRQDAQIRGQQMTLS-VALVKALGGGWG 483 >gi|320109399|ref|YP_004184989.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319927920|gb|ADV84995.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 486 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 131/486 (26%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLP-------TQFSIGNSKNLINIDTLK--WWESF 56 A ++ ++LLAGC VGP Y P+ L P T F+ G + LK WW F Sbjct: 9 AASAVSLLLLAGCKVGPNYKTPNAILAPAFKEAPPTTFAEGWKTGQPSDTALKGDWWTLF 68 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------SYASISH 106 ND LN L N + A AA+ I R+ P+ Y++ Sbjct: 69 NDAQLNALEPQVDTANQDLKSAEANFRAARAQIGYSRSFEAPTISTAPSTSAVRYSANQP 128 Query: 107 RFIPNLKTNSTGQL----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 F P L N TG L D +++IDL+G+ RR + + AN A A ++ A+L++ ++L Sbjct: 129 YFNPTLANNGTGNLSVPVDLNYEIDLWGRVRRGVTQARANAQRADADLENARLSLHAELA 188 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + + + +Y+ ++L+ ++ G + + ++ Sbjct: 189 MDYFNLRGADAQKQLLDNTIKVYQDALKLTQDRYDGGVAPMSDVAQARTQLDQAMVQRTD 248 Query: 222 LEKSFRMNVHNISTLLGY-------PATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIR 273 ++ N H I+ L+G P T Q +P GI PA L+ Sbjct: 249 VDIERAQNEHAIAVLIGQAPAALTIPPTALDMAGQT----------LPAIPGILPATLLE 298 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKL 330 RPDI QE+ +A + +IGIA++ YP+LSL+ + T N F + W+ GP+L Sbjct: 299 RRPDIASQERNMAAANEQIGIAQAAYYPTLSLSAAAGFTGTSALNWFTWPSRFWAVGPQL 358 Query: 331 YLPIFDKGKIKSNIRRAESSAQ--EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 IFD G+ +S +A S AQ E +++T L A ++VE+ L + + + + Sbjct: 359 SQTIFDAGRRRS--VKALSVAQYDETVANYRQTTLTAFQQVEDDLAVLRVLENEARQQRA 416 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIA 445 ++S SL Y G + L ++ + A + E+D I +R+L S V L A Sbjct: 417 TTVSAEQSQSLFETRYEGGVDTYLQVVTWQTAALNNQRNEID--ILQRRLNAS-VLLIKA 473 Query: 446 IGSGYN 451 +G G++ Sbjct: 474 LGGGWD 479 >gi|284035751|ref|YP_003385681.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] gi|283815044|gb|ADB36882.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] Length = 475 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 108/471 (22%), Positives = 219/471 (46%), Gaps = 49/471 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L++GC VG Y +P + P QF + + ++ + W + F DT L L+ AL N Sbjct: 20 LLVSGCKVGQHYQRPTTQM-PEQFRGRSQSDTTSVALIPWRQFFRDTELQNLIGTALTNN 78 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---------------------RFIPN 111 + A +RI + + R L P+ A I+ R + + Sbjct: 79 FDLQVALKRIEENQAYVRQTRYALLPAVNAQIAASTVTPSRNSLNGLSLENFIGTRHLED 138 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 TN L W+ID++G+ RR E++LA + N+++ + Y + Sbjct: 139 FSTN----LSLSWEIDIWGRIRRQNEATLAQFLQTEEAAKAVRTNLVASVATGYFNVLLL 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ +A + + L + L + G ++L++ + EA+ ++ + LE++ + Sbjct: 195 DAQLDVAKRNVALGDSIVRLIRFQKKSGDVTELAVQQAEAQRQAADLLRSQLEQALVIEQ 254 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + I LLG +P + + S + + G+PA L+ NRPD+R E L + Sbjct: 255 NGIRHLLGDWPGA-----IARSSRLTTYPVADTLLTGVPAQLLANRPDVRMSELGLVAAN 309 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-------THWSFGPKLYLPIFDKGKIKS 342 A+ G+A++ LYP+L++ GS L NSF N ++ L P+F + ++++ Sbjct: 310 ARAGVAEASLYPALTITGSGGL---NSFRAVNWFALPTSLFYNLAAGLVQPVFQRRQLQT 366 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSL 399 + ++ + I +++++ A+ +V NAL + E ++I TK V+ +++ Sbjct: 367 QLEVSQIQRESALIQFRQSLTTAVTDVSNALVRNEKLQEQERIATKRAQTVQ---GAITN 423 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G + L+++ + + E+ L+ KRQ + VD+Y ++G G+ Sbjct: 424 AKLLFKSGMATYLEVITAQSNALQAELTLADIKRQRLGAMVDVYRSLGGGW 474 >gi|190575901|ref|YP_001973746.1| putative multidrug resistance outer membrane protein [Stenotrophomonas maltophilia K279a] gi|48927367|emb|CAG34258.1| outer membrane protein [Stenotrophomonas maltophilia] gi|190013823|emb|CAQ47461.1| putative multidrug resistance outer membrane protein [Stenotrophomonas maltophilia K279a] Length = 466 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 217/460 (47%), Gaps = 34/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIAL 69 ++ LAGC T+ P+ T P +P Q+ ++ + ++ + W + F D L +++ +L Sbjct: 18 VLALAGCSTLVPKNTA-VAPAIPAQWPAEAAQGEVADVAAVGWRDFFTDARLQQVIDQSL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTG 118 Q N + A + A+ RAD P + A ++ +F + Sbjct: 77 QNNRDLRVAVLNVERARGQYRVQRADRVPGVAVTGQMQRQGTDAGVNEQFTAGVGV---- 132 Query: 119 QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++++DLFG+ R++ E++L + A A+L+++++ +++ +R+ IA Sbjct: 133 ---AEFELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGADAQRLKIA 189 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L Y+ ++ L+ + +G +S L L + +++ +D L + + ++ L Sbjct: 190 DATLKTYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQDRNALALLA 249 Query: 238 GYPATEFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G L ++ +P L P G+P+D++ RPDI E +L + A IG A Sbjct: 250 GGQLDPALL-----PDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANIGAA 304 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL GSI N F WSF PK+ LPIF GK+++N+ A + Sbjct: 305 RAAFFPSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAIANADRD 364 Query: 353 EQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++++ +E +AL +++ D+++ ++ Q VE +++ LS Y G S Sbjct: 365 IALAQYEKSIQVGFRETADALALNVSLDEQVSSQ-QRLVEAAEQANRLSQARYDAGLDSF 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +LD R + A+ + + LY +G G++ Sbjct: 424 VTLLDARRTAYNAQQTQLQAQLAQQANRITLYKVMGGGWH 463 >gi|295701189|ref|YP_003610190.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295441512|gb|ADG20679.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 530 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 112/474 (23%), Positives = 216/474 (45%), Gaps = 47/474 (9%) Query: 15 LAGCTVGPEYTKPHMPLL----PTQF---------SIGNSKNLINIDTL--KWWESFNDT 59 L+GCTVG EY P P PT + G ++ L +WW + Sbjct: 47 LSGCTVGSEYRTPAPPATDNYTPTALPEYTVSSPGATGLAQQFKAGGELPAQWWTLYRCE 106 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRA-DLFPS------------SYASISH 106 L+ L++ AL + I A+ + A EN+ + DL+P+ + A++ Sbjct: 107 PLDALIREALSNSPNIAAASAALRQASENLRAQTGIDLYPAIDVKLNTTREKLNGATLGQ 166 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + + ++ + +DLFG RH +E+ A +D Q+ L + + ++ + + Sbjct: 167 PSLKRILSLYNASVNVSYNLDLFGAARHELEALGAQVDFQSLQLQSTYLALSANIVTAAV 226 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E+I +I + + + + G +++++ E + + +P L +S Sbjct: 227 REASLREQIDATERIAADEETQLGVLRKQLEFGGVGRVAVLSQETLLAQTRATLPPLRQS 286 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IP--INIGIPADLIRNRPDIRYQE 282 H ++ L G P ++ F+ +++ +P + I +P+ L+R RPDI E Sbjct: 287 LDRVRHQLAVLAGKPPSD------NSVPEFRLSMFTLPQTLPIALPSSLVRQRPDILAAE 340 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A +G+A +++YP L+L+ G +LT + W+ G L PIF+ G+ Sbjct: 341 ALLRQASAHVGVATANMYPQLTLSANYGPQSLTPAGMLKYADMIWNIGAGLTQPIFNGGE 400 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + R AE++ E +++T+L A +EV + L +++ D + A S+ L Sbjct: 401 LSAKKRAAEAAFDEANGQYRQTILLAFEEVADTLRALDHDATALAAQTGAWRAASSSLEL 460 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 + +R G S L +LD +R + V+L+ A+ A Y D L+ A+G G+ Sbjct: 461 TRGQFRAGGVSYLALLDAQRQYQQTIVNLTQAR---AARYADTAALFEALGGGW 511 >gi|254248500|ref|ZP_04941820.1| hypothetical protein BCPG_03331 [Burkholderia cenocepacia PC184] gi|124875001|gb|EAY64991.1| hypothetical protein BCPG_03331 [Burkholderia cenocepacia PC184] Length = 506 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 120/476 (25%), Positives = 215/476 (45%), Gaps = 63/476 (13%) Query: 18 CTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 CTV P Y +P + P P + + + WW +F D L Sbjct: 27 CTVVPVYRRPPVDTPAAWRLDPADAYWQPAAPARAPLDPA----------WWTAFGDAQL 76 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------IPNLK 113 + L AL+ N + R + AK + SV + +P+ + S RF N Sbjct: 77 DALEADALRNNQNLKAMAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQTNYA 136 Query: 114 TNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T S + ++ +++DLFG+ RR++E++ A+ + + A+L + + L SY Sbjct: 137 TQSMSTVQNEIQVGAAVSYELDLFGRVRRNVEAAQASTEQSRDDFANARLVLSADLASSY 196 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R I + + +DL +K ++ + GA S L L++ A++ + + L + Sbjct: 197 FTLRELDTEIDVVKRSIDLQQKALDYVSARHDLGAVSGLDLLQQRAQLDATRTQAQLLMQ 256 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIR 279 I+TL+G PA F P +PIN G+P+DL++ RPD+ Sbjct: 257 QRAQVETAIATLVGTPAPAFSL----------PPRVVPINAPALPTGMPSDLLQRRPDVA 306 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 E+ +A + A+IG+A++ +P ++L+ I F G T WS G L P+F Sbjct: 307 SAERAMAAANAQIGVARAAYFPRITLSPDIGWDA-TRFAGLFTVPALLWSVGGSLSQPLF 365 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+K+ + A++ ++++TVL A +EV+NA+T ++ + + AV+ +K Sbjct: 366 EGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDARK 425 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +SL+ Y G +D+L ++ E + Q A V L A+G G++ Sbjct: 426 LVSLAQDRYAGGLTPFIDVLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 481 >gi|187736522|ref|YP_001878634.1| RND efflux system, outer membrane lipoprotein, NodT family [Akkermansia muciniphila ATCC BAA-835] gi|187426574|gb|ACD05853.1| RND efflux system, outer membrane lipoprotein, NodT family [Akkermansia muciniphila ATCC BAA-835] Length = 477 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 215/464 (46%), Gaps = 21/464 (4%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I RAI + C +GP++ MP+ P F G +I L WW+ F + L Sbjct: 7 ITRAILLGTAFAASSCMMGPDFKPVDMPM-PAAFR-GAPAATESIADLPWWKVFKNKDLQ 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTG 118 L+ N + R+ A++ I A LFP S S + +TG Sbjct: 65 DLLTDTYNNNRDLKATMARVEKARQYITITEAPLFPWADYSGSVSKGSNYTGGSIAQTTG 124 Query: 119 ------QLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +D+ W++D++G+ RR E++ A+ ++ L+++ ++ SY+ Sbjct: 125 TTLTPGAIDAGISWELDIWGKTRRMTEAARADYLASDEGQRALMLSLLRQVADSYLQLLQ 184 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+++I + ++ Y +++ L + +L + +A + S ++ IP ++ N Sbjct: 185 LDEQLAIVQKSVESYSESLRLFDEQLEGQVGDRLQVASAKAALASSQAQIPAIQVQI-AN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + N ++L A + + + N+ +P GIPA ++ RPD+R E +L + Sbjct: 244 LENAVSVLAGRAPGHIR-RSGSTRDIAYNVKVPA--GIPAYILSRRPDVRQSEYQLRAAN 300 Query: 290 AKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++G+A ++ +P++SL G +A G W G L P+F GK+ ++ + A Sbjct: 301 AEVGVAIANYFPTISLTAAGGLASADLRHVQGRRGGWGLGANLTGPLFQAGKLTASEKAA 360 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ +++TVLNA+ EV + L ++ + I AVE + ++ LS YR G Sbjct: 361 KAEFLAARNDYEQTVLNALAEVSSTLIQRDKLRSITATQSEAVEAYHTAVKLSFERYRTG 420 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +++L ++ ++ LS Q A + V LY A+G G+N Sbjct: 421 LSNYIEVLYAQQNLYPAQIQLSQYYYQHASTLVSLYTALGGGWN 464 >gi|26988794|ref|NP_744219.1| multidrug efflux MFS outer membrane protein, putative [Pseudomonas putida KT2440] gi|24983592|gb|AAN67683.1|AE016398_7 multidrug efflux MFS outer membrane protein, putative [Pseudomonas putida KT2440] Length = 473 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 195/419 (46%), Gaps = 24/419 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-- 108 +WW + D LN+ V+ AL N + QA + A I A +PS+ ++ + Sbjct: 60 RWWALYQDPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGR 119 Query: 109 -------IPNLKTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 +N+ Q L+ +++D++GQ R I+ + +++ A +D+ +L Sbjct: 120 SADDQTLAEATDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V+++ +YID + R+ A Q L ++++LS + G + L +L + Sbjct: 180 QVVAQTTRAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQ 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + +P L +M ++ +S L G + + + P L +P+ G L+ Sbjct: 240 VRAQLPMLSARRQMALYELSMLSGQASV-----AEATTCVAIPTLSVPLPAGDGWHLLER 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 RPD+R E++L + + I ++DLYP +S S+ + N + GP + Sbjct: 295 RPDVRQAERELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIR 354 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + +AE+ + Q ++ L+A+K+V AL + +++ + L A+ Sbjct: 355 WEFPNLKANRARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALA 414 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S +L+ NYR G L +LD ER + + + A+ +LA++ V+L+ A+G + Sbjct: 415 HSQHSFALAQGNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473 >gi|167621772|ref|YP_001676557.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167351513|gb|ABZ74243.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 510 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 121/478 (25%), Positives = 212/478 (44%), Gaps = 55/478 (11%) Query: 13 VLLAGCTVGPEYTKP------------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 V LAGC++ P Y +P P P +S + + WW FND Sbjct: 19 VFLAGCSLSPVYQRPTTSLSPAFKEALDAPAAPQGWSPAAPSD--QHERGPWWRVFNDEV 76 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL----- 112 L+ L A N + A R+ A+ + +DLFPS S + P L Sbjct: 77 LDALEARASGANQDVAAAAARVEQARGLQRAALSDLFPSVDVSLDGARRKDAPALQGLPQ 136 Query: 113 ------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSY 164 +T Q + ++ DLFG+ R S+ A + +Q +A +L V + + +Y Sbjct: 137 DTPSASRTLLRAQAGATYEADLFGRARAGLSA-ARDERQQSQALLADVQLAVQADVAQTY 195 Query: 165 IDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 R + I++ Q L ++ + LSH ++ +G S+L L + E+ S ++D ++ Sbjct: 196 FLLRAYDAEIAVLTQTTSLRQEGLAYLSH-RYEEGQISELDLARARTELASAKADTLSVR 254 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIR 279 + H ++ LLG + + P + I++ G+P+ L+ RPDI Sbjct: 255 RLRASAEHGLAILLGQAPADL---------SLSPAPLVAIDVQPPAGLPSSLLERRPDIA 305 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+ + + A+IG+A+S +P+LSL G + + F + GP L LP+ D Sbjct: 306 AAERAMMAANARIGVARSAYFPTLSLTAEGGFASAELGDLFKHGAAGFIAGPILSLPLLD 365 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ K+ + RA E +++ VL A++E E+ L+ + + AV ++ Sbjct: 366 GGRRKAGVIRARGRYDETLALYRQQVLVALRETEDGLSDLRYLRDQTRAQAEAVSASRRG 425 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ YR+G S LD++D ER + + + LS + A S V+L A+G G+ Sbjct: 426 AQIARSQYREGSASYLDVIDAERTALQAQRGAIQLSGVQ---AVSTVNLIRALGGGWR 480 >gi|116620698|ref|YP_822854.1| RND efflux system outer membrane lipoprotein [Candidatus Solibacter usitatus Ellin6076] gi|116223860|gb|ABJ82569.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Solibacter usitatus Ellin6076] Length = 495 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 46/472 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------------KWWESFNDTSLN 62 GCTVGP Y +P P P F N D KWWE + D +LN Sbjct: 19 GCTVGPNYKRPTAPA-PPAFKEQPPPNFKEADAAGWKQAHPGDAFLKGKWWEVYQDPALN 77 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK 113 L + N ++QA + AK + RA LFP+ S A N Sbjct: 78 ALEEQVALNNQNVMQAEAQFRQAKAAVRVARAALFPTIGTGASTTVSRAQGGTGGFGNSG 137 Query: 114 TNSTGQ-------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +S G +D+ W+ DL+G RR + + A S A+V+ A+L S+L Y Sbjct: 138 NSSPGARVVYSLPVDASWEPDLWGSIRRGVTGAAATAQSFAAEVENARLLYQSELASDYF 197 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 I + + Y + + L+ +F G S L + + E+++ ++ + L Sbjct: 198 QMHSIDAEIDLLKRTEASYAEYLTLTQNRFKGGVASDLDVAQAESQLYGTQASLIDLGVE 257 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H I+ L+G E + L P+ +G+P+ L+ RPDI E+++ Sbjct: 258 RAAFEHAIAILIGKAPAEVTL-----PSALLATLPPPVPVGVPSQLLERRPDIAASERRV 312 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKI 340 A + +IGIA + YP+L+L+GS+ L + S P Y WS G L +FD G+ Sbjct: 313 AAANEQIGIAMAAFYPNLTLSGSVGLQNSTISRVISAPTY--LWSLGGGLAYTLFDAGRR 370 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ + +++ ++ETVL A+++VE+ L ++ ++ K+ V ++++++S Sbjct: 371 RAIVVSQQAAYDATVAAYRETVLTALQQVEDNLAALRILEQEAAKIGDTVSSAQRALNIS 430 Query: 401 MINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L +L + E +++ R+L S V L AIG G+N Sbjct: 431 TAQYRAGTTSYLTVLTSQAQLLSAERTAVTLQSRRLTSS-VQLIEAIGGGWN 481 >gi|300697834|ref|YP_003748495.1| outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum CFBP2957] gi|299074558|emb|CBJ54109.1| putative outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum CFBP2957] Length = 508 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 119/470 (25%), Positives = 220/470 (46%), Gaps = 35/470 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK---WWESFNDTSLNKLVK 66 L+ C VGP+Y +P + P Q+ + G K + D + WWE F D LN L + Sbjct: 23 CALVTACAVGPDYKRPSAEV-PQQYKETAGEWKVGMPSDAIARGTWWEIFGDPQLNALEE 81 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQ 119 N IL A + A+ + S RA FP+ S S +++T STG Sbjct: 82 QVAAANQNILVAEAQYREAQALVQSARAQFFPTLTGSASASRSRSVRTTVNADGSLSTGS 141 Query: 120 ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 LD+ W++DL+G+ RR +ES+ A+ ++ + A L+ + L Y R Sbjct: 142 PTIANAQSLTLDASWELDLWGRIRRTVESNRASAQASAGDLASALLSAQATLAQDYFQLR 201 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + Sbjct: 202 VTDTQKAVLQRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQAQALLLDAEVTRAQ 261 Query: 229 NVHNISTLLGYPATEF-LHYMQKQSNNFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLA 286 H I+ L+G +EF L + P L IP+ I P+ ++ RPDI E+++A Sbjct: 262 LEHAIAVLIGKSPSEFSLAPTDAATAQALPPLPDIPLEI--PSTVLERRPDIAAAERRMA 319 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG+AK+ +P+L+L S L+ + + P + WS GP L +FD G Sbjct: 320 AANADIGVAKAAYFPTLTLGASAGLSANTLSRLATLP--SRIWSIGPTLAATLFDGGARA 377 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L + Sbjct: 378 AALDKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQEAARLDL 437 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L+++ + E L + + + V L A G G++ Sbjct: 438 NRYRAGTVSFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKATGGGWH 487 >gi|71153534|sp|O31101|SRPC_PSEPU RecName: Full=Solvent efflux pump outer membrane protein srpC; Flags: Precursor gi|2605915|gb|AAD12177.1| outer membrane channel protein [Pseudomonas putida] gi|256033035|gb|ACU57135.1| outer membrane channel protein [Pseudomonas putida] Length = 470 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 119/464 (25%), Positives = 216/464 (46%), Gaps = 32/464 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVK 66 +++L GC++ P+Y +P P+ PT + G + +I T K E F D +L +L+ Sbjct: 11 LLMLGGCSLIPDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKDPALVRLLD 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN-LKTNSTGQLDSD 123 AL+ N + A + + + + RA+ FP+ AS + +P+ L ++DS Sbjct: 71 AALENNRDLRIAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPTGDSRIDSQ 130 Query: 124 WKI--------DLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +++ DLFG+ R + E LA + A V IA +I + +Y R Sbjct: 131 YQVGLVTAYELDLFGRIRSLSNQALEKYLAT-EEAQRSVQIA---LIGDVATTYFLWRTD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + L Y +++ + G +S+L + + + ++ + +V Sbjct: 187 QALLELTEATLTSYVESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDV 246 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + LLG L +++ + + G+PADL+ NRPDIR E +L + A Sbjct: 247 NALELLLGSKIPTDL----PKNSPLAMSALGKVPAGLPADLLLNRPDIRSAEHQLMAANA 302 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL GS + D F + WSF P++ +PIF+ GK+++N+ A Sbjct: 303 NIGAARAAFFPRISLTASAGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANLDYA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E T+++++ A +EV + L + K ++ V+ +K SL+ Y QG Sbjct: 363 ELQKDVGVATYEKSIQTAFREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRYDQG 422 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L +LD +R + L + S V LY A+G G++ Sbjct: 423 VDSYLTVLDAQRELFSSQQKLLNDQLDQINSEVQLYKALGGGWS 466 >gi|153832221|ref|ZP_01984888.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio harveyi HY01] gi|148871532|gb|EDL70387.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio harveyi HY01] Length = 497 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 125/480 (26%), Positives = 216/480 (45%), Gaps = 50/480 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC VGP+Y P + T + G S+N N WW FND +LN LV Q Sbjct: 15 LSGCAVGPDYQAPTTSMAETYLHVEPDGVSQNREN--EAFWWTEFNDPTLNDLVLDMQSQ 72 Query: 72 NLTILQATERINAA----------KENILSVRADLFPSSYASISHRFIPNL--------- 112 N+ + A ERI A K ++V A F + P L Sbjct: 73 NIPLKVAAERIKMADSYKTVVESFKVPTVNVGAGYFNYQLSKNDSLLGPALNPIGDSAAG 132 Query: 113 ---KTNSTGQLDSD-----------WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI- 157 + ST LD+ W++DLFG R +S+ A + A++ + L + Sbjct: 133 LPPQIGSTTLLDNQHDGVFAGASIAWELDLFG-RIDRQSNAAKIRVEQAEIYQSGLKTLL 191 Query: 158 -SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + LI +Y+ + ER+ +A L+ +K + L G S L L + +A + ++E Sbjct: 192 TADLIHNYLQYQGATERLDLAKSNLEDQQKTMALVEKVVRSGYGSDLDLAQAKATLAAME 251 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRN 274 S IP LE + +++ H I+ LLG P L ++ + + Q P + + +G+P+DL++ Sbjct: 252 SIIPQLEIAQQVHKHRIAVLLGEP----LSKVETRLADTQGVPAMQNMVPVGLPSDLLQR 307 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLY 331 RPDIR E+++A ++ + ++ YP L G+ + + D+ F + W + Sbjct: 308 RPDIRIAEREMAAINEELAASIANQYPKFFLTGAPGVSASSFDDLFSSDSFGWVGAAGIS 367 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 IFD G+ + ++ +T+Q V +A EV++ L + ++ ++ A+ Sbjct: 368 WNIFDGGRGDALEEITQARFDAATLTYQHAVDSAFAEVDSTLFAYGRSQENQRRIDDALV 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ S + YR G L +LD +R ++ AK Q A+ V LY ++G + Sbjct: 428 ATDKAASKAKSLYRAGLIDHLSVLDAQRQQRMMQDRQVAAKLQTAQVTVALYKSLGGDWT 487 >gi|116624870|ref|YP_827026.1| RND efflux system outer membrane lipoprotein [Candidatus Solibacter usitatus Ellin6076] gi|116228032|gb|ABJ86741.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Solibacter usitatus Ellin6076] Length = 480 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 213/458 (46%), Gaps = 22/458 (4%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 F +LL C VGP Y +P + P S + + L WW+ F D +L +L+K +L Sbjct: 6 FSLLLPACAVGPNYRRPSVSAPPAFRSAAGAAQQASFADLPWWDVFRDDTLKQLIKTSLA 65 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYASIS----HRFI-------PNLKTNSTG 118 N + A R+ A++ R++ FP+ +Y++++ ++FI P + G Sbjct: 66 NNYDLQAAIARVEQARQVAALARSEYFPAINYSTVTTYGHNQFINSPVSISPGAQGFLLG 125 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W+ D++G+ RR E + A + L + S L +Y + + ++ IA Sbjct: 126 IASAAWEADVWGRIRRTNEGARAQYLATEEARRGVMLTLTSDLSQAYFELLGLRLQLDIA 185 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + Y + L + +G + L + A++ S + + +E+ + + IS LL Sbjct: 186 RETTQSYTATLNLFSDRLREGLGNALQTSRAAADLASAAASVREIERQIAIKENQISVLL 245 Query: 238 GY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G P ++ ++ + + I +G+P+ L+ RPD+ E+++ + A+IG+AK Sbjct: 246 GKNPGA-----IETKAKLLEETVPPSIPVGLPSALLERRPDVLSAEQRVRYANAQIGVAK 300 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 S +P + L G ++ + G WS G PIF G +++ R+A + E Sbjct: 301 SAYFPRIGLTTFFGKLSTPLADLSSGNTNAWSVGANAAGPIFRGGAVRAQHRQAIAFRDE 360 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++T + A ++V +AL S + I L V ++++ L+ + Y +G + + Sbjct: 361 AEAEYRQTAVRAFRDVADALVSREKYDAIREDLIRGVRSSEEAVRLARMRYLEGLSNYNE 420 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ ++ ++ L+ + V LY A+G G+N Sbjct: 421 VLEAQQRLYPSQLALAQTEINRRLVVVQLYKALGGGWN 458 >gi|83748930|ref|ZP_00945940.1| Probable outer membrane drug efflux lipoprotein [Ralstonia solanacearum UW551] gi|207739171|ref|YP_002257564.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum IPO1609] gi|83724429|gb|EAP71597.1| Probable outer membrane drug efflux lipoprotein [Ralstonia solanacearum UW551] gi|206592544|emb|CAQ59450.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum IPO1609] Length = 501 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 117/477 (24%), Positives = 213/477 (44%), Gaps = 40/477 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF------------------SIGNSKNLINIDTLKW 52 +LAGCT+ P Y +P P+ P F + G+++ + + W Sbjct: 11 LAAMLAGCTLMPTYQRPATPV-PAAFADASDKSDASDTSGERGNTGGDTRPAGPVADIGW 69 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 + F D SL +++ +AL N + A I A+ A LFP+ AS S Sbjct: 70 HDVFTDPSLQRVIGMALANNRDLRVAVLNIEKARAQYRVQDAALFPTVKASGSENASRTP 129 Query: 113 KT-NSTGQ-----------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISK 159 T ++TGQ S +++DLFG+ R + + +L S +++++I++ Sbjct: 130 ATLSATGQPLVAHSYSATLGFSAYELDLFGRVRSLNAQALEQYLSTVEARRSSQISLIAE 189 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ ++ + +A L L+ + G S+L+L + + + S D+ Sbjct: 190 VATAYLTLAADQDLLKLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVDSARVDV 249 Query: 220 PTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + + L+G PA E L S+ ++ I G+ +DL++ RPD Sbjct: 250 ERYTAQVAQDRNALVLLVGADLPA-ELLPRSLPDSSAATGSVLATIPPGLTSDLLQRRPD 308 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLP 333 I E L + A IG A++ +PS+SL S A T S F G + W+FGP++ LP Sbjct: 309 ILQAEHDLKAANANIGAARAAFFPSISLTAS-AGTSSASLAGLFKGGSGAWNFGPQIALP 367 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G ++N+ A +S +++ + A +EV +AL + + Q V+ Sbjct: 368 IFDGGANRANLDVANTSRDIAVAQYEKAIQTAFREVSDALAQRGTLGRQIEAQQSLVDAT 427 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L+ +++G S L++LD +R+ + +L + + V Y +G G+ Sbjct: 428 ADSYQLATARFKRGVDSYLNVLDSQRSLYTAQQNLINTRLSRFTNLVTFYKTLGGGW 484 >gi|182677125|ref|YP_001831271.1| RND efflux system outer membrane lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633008|gb|ACB93782.1| RND efflux system, outer membrane lipoprotein, NodT family [Beijerinckia indica subsp. indica ATCC 9039] Length = 525 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 116/456 (25%), Positives = 220/456 (48%), Gaps = 27/456 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQN 72 C + P Y P + L PT + G K DT WW+ ++D LN++ + A N Sbjct: 22 ACDLAPAYQPPDLEL-PTHWQGKGPFKEAQPADTAVRPGWWKLYHDPLLNRIEEEATASN 80 Query: 73 LTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNSTGQL-DSD---- 123 + A ER A++ I+ ++ LFP AS + R + L + + DSD Sbjct: 81 ADLQAAAERFVQARDMIMGAQSQLFPQVGIGFGASNNKRSVHRLFNSPADPIHDSDETFA 140 Query: 124 ----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+ D++ R + L + A+ A+L++ S++ Y R + +I Sbjct: 141 GLVSWEPDIWSAIRNKTRAELNFAEQRAAEYASAQLSLQSQIAWDYFALRGLDAQDAIYK 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + Y++++ + + + + KL + + E + S +++ ++ ++ H I+ L Sbjct: 201 QSIAYYQQSLNIIKERLSGLVSPKLDVARAENLLYSTQAEELDIQAQRQVMEHAIAILAN 260 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + F H +N + IP I +P+DL++ RPDI E+K+A + IGIA++ Sbjct: 261 TAPSAF-HI--PPANTLHTS--IPKIPTRVPSDLLQRRPDIASAERKMAQANRIIGIARA 315 Query: 298 DLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YP++S+ +G + N F N+ W++G + LPIFD G +++++++ S+ +E Sbjct: 316 AFYPNVSIRVDGGFTDSGLNLFKVANSLWAYGADVTLPIFDGGLRRADLQQSLSAYRETT 375 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ TVLNA +EVE+ L+ N V K AV ++ +++M Y+ G + LD++ Sbjct: 376 DNYRSTVLNAFREVEDGLSRTNRLSAEVKKQHAAVTAASETQTMTMDLYKGGLNTSLDVI 435 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + T + + QL + +L A+G G++ Sbjct: 436 TAQVNTLTARIREVQIQMQLLQVSTELIRALGGGWD 471 >gi|170702611|ref|ZP_02893482.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170132481|gb|EDT00938.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 498 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 106/450 (23%), Positives = 204/450 (45%), Gaps = 53/450 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPL-------------LPTQFSIGNSKNLIN-IDTL-KWWESF 56 + L AGC +GP++ P P + G+++ + TL +WW F Sbjct: 23 VALFAGCALGPDFRAPEPPTAQQYTRDAAPATTVAAGGPAGDAQTFASSAHTLQRWWTQF 82 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHR-------- 107 L++LV A + + T+ +A R++ A++N A + P A++S Sbjct: 83 GSEPLDRLVDTAWRNSPTLAEARARLDEARQNHAAQAGATMLPRVDANLSATREKVDIAA 142 Query: 108 -----FIPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 +PN T + + +D+FG RR +E+ A +D +D A+L + Sbjct: 143 FGLPASVPNPGPFTLYDASVSVSYALDVFGGNRRALEALRAQVDYQAYTLDAARLTLAGN 202 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + I +++++ Q+LD + + + +F G S+ + A + ++ + Sbjct: 203 VVATAILRASLAQQVALTRQLLDAQARQLRIVEARFAAGGVSRADVHAQRALLAQTQASL 262 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-------PINIGIPADLI 272 P L + H ++ LLG P S + P+L + + + +P+ L Sbjct: 263 PPLVARYAQAGHRLAILLGAP----------PSGDALPDLALDALALPRTLPVALPSTLA 312 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPK 329 R RPDIR E L + A +G+A ++LYP S++ I + G N W+ G Sbjct: 313 RERPDIRAAEAVLHQASANVGVATANLYPRFSISAGIGSERTRIADIVSGLNV-WNVGLG 371 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+F G++++ R AE++ + +++ETVL A+++V +A+ ++ D + A Sbjct: 372 LTQPLFHGGELRARKRAAEAAYGAAFASYRETVLLALQQVADAMRAVEHDAVELQARDAA 431 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER 419 + S +++ Y G SL+D+LD +R Sbjct: 432 AQQAAASRAIAGDRYAAGGISLIDLLDAQR 461 >gi|309780130|ref|ZP_07674882.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] gi|308921162|gb|EFP66807.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] Length = 472 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 108/489 (22%), Positives = 221/489 (45%), Gaps = 64/489 (13%) Query: 10 LFIVLLA--GCTVGPEYTKPHMPLLPTQFSI--------------GNSKNLINIDT-LKW 52 + I LA GC VGP++ P P T +S G +++L++ + W Sbjct: 1 MLIAALAVSGCAVGPDFKAPAGPAA-TGYSAQPVSRETASAPVVGGEAQHLVDANVPADW 59 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERIN---------------AAKENILSVRADLF 97 W F +L+ LV AL+ + ++ QA R+ + + +VR + Sbjct: 60 WHLFRSPALDALVDEALRASPSVAQAEARLRQAQAEAQAQFGYALPSVDGTVSAVRQQIN 119 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P ++ + + P T + L + +D+FG RR +E+S A +D+ +++ A+L++ Sbjct: 120 PEAFGFNTPK--PGPFTLYSASLSVSYALDIFGGVRRALEASRAQVDTQRYELEAARLSL 177 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ + + +I+ ++ +K +E++ + + G +++ + + Sbjct: 178 AGNVVTTAVRIAALDAQIATTQRLAAEQRKQLEITERRLSVGGVAQVDAFSQRTLVAQTD 237 Query: 217 SDIPTLEKSFRMNVHNISTLLG---------YPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + +P L + H +S LLG P+ + LH L P+ + + Sbjct: 238 ATLPPLAQQAAQQRHRLSVLLGREPGAGLPDLPSLDALH------------LPDPLPVSL 285 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 P+ L + RPDIR E ++ A +G+A ++L+P ++L+ GS A + N ++ W Sbjct: 286 PSTLAQRRPDIRAAEAMWHEASANVGVATANLFPRITLSAGLGSEATSFRNLLGAGSSIW 345 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + G L P+F G +++ R AE++ +++ VL ++EV + L ++N D + + Sbjct: 346 NLGAGLTQPLFHGGTLRAKKREAEAAYDAAGAAYKQAVLQGLQEVADTLHAVNNDAQTLQ 405 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT--AKVEVDLSIAKRQLAKSYVDL 442 A + ++++ + + G S L +LD +R A ++ S A R L + L Sbjct: 406 ARALATDQAQQTLRAAQARHAAGGISTLTLLDAQRQVDQATLQQVQSQADRLLDSAA--L 463 Query: 443 YIAIGSGYN 451 A+G G+ Sbjct: 464 MQALGGGWQ 472 >gi|303256595|ref|ZP_07342609.1| outer membrane efflux protein OprM [Burkholderiales bacterium 1_1_47] gi|330999233|ref|ZP_08322950.1| outer membrane efflux protein OprM [Parasutterella excrementihominis YIT 11859] gi|302860086|gb|EFL83163.1| outer membrane efflux protein OprM [Burkholderiales bacterium 1_1_47] gi|329575091|gb|EGG56642.1| outer membrane efflux protein OprM [Parasutterella excrementihominis YIT 11859] Length = 499 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 217/472 (45%), Gaps = 43/472 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDT-LKWWESF-NDTSLNK 63 + + + + AGCT+ P+Y +P P+ T F G + K+++ + L W+ F + K Sbjct: 8 VIACSLAVCAGCTMAPKYERPAAPVAAT-FPTGEAYKDVMTTASPLPDWKVFITNPKAKK 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------------I 104 +V++AL N + A I A+ R+ L PS A + Sbjct: 67 VVEMALANNRDLRVAILNIEKARAAYGIQRSALMPSVAAGLQENTGKTPSMMSATGSSYV 126 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 SH + NL + + W++DLFG+ R + E++L SA A+ +I+++ S Sbjct: 127 SHTYQANLASTA-------WELDLFGRVRSLSEAALQQFFSAEENRAAAQNALIAQVATS 179 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 +I+ KE + + L +++ +L + GA+S L L + + + + + E Sbjct: 180 WINLGAQKEFLRLQKITLQSQEESFKLMSDSYRLGASSLLELEQARTTVATARAAVAQYE 239 Query: 224 KSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRY 280 +S + ++ ++G PA + +++ +N Y I G+ +D++ NRPDI+ Sbjct: 240 RSLAQAQNALNLVVGSQVPADLEPNNLEEATN------YGAIAPAGLSSDILLNRPDIKA 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A+++ +P +SL I + + F W+F P + LPIF Sbjct: 294 AEHDLMSANANIGAARANFFPRISLTAGIGSSSRHLSDLFDAGTGLWTFAPSVSLPIFTG 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G S +R+AE+ + T+++TV NA EV +AL ++ + L+ V + + Sbjct: 354 GANLSTLRQAEAQQKIMVATYEKTVQNAFAEVSDALATVGTVNRQCAALKDLVNATETAY 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LS Y+ G L +L+ +R + + A+ S V LY +G G Sbjct: 414 RLSQSRYKNGLDGFLTVLESQRQMVAAQTNYISAESNRLSSGVMLYKVLGGG 465 >gi|326386403|ref|ZP_08208026.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326209064|gb|EGD59858.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 468 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 101/457 (22%), Positives = 219/457 (47%), Gaps = 30/457 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 + + C+ P + +P P+ P ++ G++ + +I + W + F D L L+ AL N Sbjct: 1 MASACSFAPPHVRPAQPV-PETYAPGDTGS-GSIARIGWRDFFQDAQLRALIATALANNR 58 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRF------IPNLKTNS------TGQLD 121 I A R+ A+ A L+P A+ + P + + QL Sbjct: 59 DIRIAAARVEEARATWRIQGAALYPQVNAAGTDALGRSIISFPGFGNEAYDIKLWSAQLS 118 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W++D +G R++ ++ + L + AQ +A +++I+++ Y+ R ++ER ++A Q Sbjct: 119 AKWELDFWGSLRNVRAAARDQFLATEQAQRAVA-IDLIAQVANGYLLERAYEEREALARQ 177 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + ++ + + ++ G+ SKL + + + + ++ + L + +N + + L+G Sbjct: 178 TIATREEALRIMRRRYEVGSGSKLEMTQAQMLLGQAQAALQALGQEQGVNRNALDLLVGR 237 Query: 240 PATEFLHYMQKQSNNFQP---NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P ++ S P I + G+P++L+ NRPDI E +L + A IG A+ Sbjct: 238 P-------VEITSGALGPVGGAQEIALPAGLPSELLINRPDIMAAEWQLRAAEANIGAAR 290 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P++SL G+ + F + W+F P + +P+F+ G + +N+ A++ Sbjct: 291 AAFFPNISLTGAYGTGSVDLNGLFQSGSQVWAFNPTISVPLFNAGALAANLDVAKARRVG 350 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TV +A ++V +AL + + + ++ ++ L+ + + GR + L+ Sbjct: 351 VVAQYEKTVQSAFRDVSDALIRRRQLALQIASTRTVLDALRERTRLAQLRFDNGRSAYLE 410 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +R + E L +R S + LY ++G G+ Sbjct: 411 VLDAQRDLFETEQALVELRRAYLASGIALYASLGGGF 447 >gi|300694053|ref|YP_003750026.1| rnd efflux system, outer membrane lipoprotein [Ralstonia solanacearum PSI07] gi|299076090|emb|CBJ35401.1| putative RND efflux system, outer membrane lipoprotein [Ralstonia solanacearum PSI07] Length = 485 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 211/479 (44%), Gaps = 40/479 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLP------------TQFSIGNSKNLINIDTL--K 51 A+ L GC VGP++ +P P + G ++ L+ + + Sbjct: 2 AVSVLLAATAGGCAVGPDFHRPAAPAVAGYTPTPPAPAASAPVEGGQAQRLVEGQEVAGQ 61 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F +LN+LV+ AL+ N + A + A+EN+ + R FPS A ++ Sbjct: 62 WWTMFGSGALNELVEAALKANPDLQSAEAALRVAQENLAAARGGFFPSVDAQMTSARQKT 121 Query: 112 LKTNS-------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + + T QL + D+FG RR +E+S A + A Q + A L + Sbjct: 122 AEVLASPLAAGDLMYSLHTAQLTVSYAPDVFGGLRRQVEASAAQAEVAAFQREAAYLTLT 181 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ + I + +I H+ + + + + + G + EA + IE+ Sbjct: 182 SNVVAAAIQEASLRAQIQATHEAIAVASRLLAAVRKQQKAGQLGAADVAAQEAALAQIEA 241 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 +P L+K + I+ L G +P+ + +S L++P + + +P+ L+ Sbjct: 242 TLPPLDKQLALQRDLITVLAGRFPSEAMAQTFELES------LHLPQALPLSLPSRLVEQ 295 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDIR E +L + A+IG+A + PS++L GS AL F W + Sbjct: 296 RPDIRAAEAQLHAASAQIGVATAARLPSITLTADLGSTALEFSKLFASGTGFWGLTGGIA 355 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF G + R A+++ + ++ TVL A + V + L +I+ D + + HA + Sbjct: 356 QPIFRGGTLLHQQRAAQAAYDQAAAQYRSTVLTAFQNVADTLHAIDADARALQAATHAAD 415 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +KS++++ + G + +L E+A + V ++ A+ V L A+G G+ Sbjct: 416 AARKSLAIAQRQWTLGLIAYPAVLQAEQAYQQSLVSVAQARAGRLADSVALLQALGGGW 474 >gi|78222031|ref|YP_383778.1| RND efflux system, outer membrane lipoprotein, NodT [Geobacter metallireducens GS-15] gi|78193286|gb|ABB31053.1| RND efflux system, outer membrane lipoprotein, NodT [Geobacter metallireducens GS-15] Length = 517 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 115/470 (24%), Positives = 212/470 (45%), Gaps = 35/470 (7%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPT--------QFSIGNSKNLINIDTLKWWESFN 57 S+ + LAGCT + P+Y +P P+ + + + K + +I W E F Sbjct: 51 CVSIMTLTLAGCTTMAPKYERPAAPVSAAWPEGPAYKETGVRSGKPVADI---PWQEFFE 107 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D L KL+ +AL+ N + A I ++ R+DLFP + A S + IP + Sbjct: 108 DEKLRKLIALALENNRDLRVAALNIERSRAQYRIQRSDLFPKVDATADGSVQRIPQ-DLS 166 Query: 116 STGQLD-----------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIP 162 +TGQ S +++DLFG+ R ++ L + A+ + ++++++++ Sbjct: 167 ATGQARTVDQYSVGLGVSSYELDLFGRVRSLKDQALEQYLATEQARRSV-QISLVAEVAS 225 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ +ER+ +A L + + L+ +F G +S L L + ++S DI Sbjct: 226 NYLTLAADRERLKLAQDTLASQQSSYNLTKSRFEAGVSSFLDLNQARTSVESARVDIARY 285 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 +V+ ++ ++G P + L N P G+P+D++ RPDI E Sbjct: 286 TTLIAQDVNALNLVVGSPVSTALLPAALTENLSAMKDVAP---GLPSDVLLRRPDILQAE 342 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A+++ +P ++L S+ D F G + W+F P++ LPIF G Sbjct: 343 NLLKGANANIGAARANFFPRITLLSSVGFGSDELTGLFSGNSFTWNFAPRITLPIFTAGA 402 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ ++ AE +++ + A +EV +AL ++ Q + +S L Sbjct: 403 NQATLKVAEVDRDIAVAQYEKAIQTAFREVADALAQRGTIDDQLSAQQSLTDATSESYRL 462 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S Y +G S L +LD +RA + +L + + LY +G G Sbjct: 463 SQARYEKGVDSYLQVLDSQRALYGAQQNLIGVRLVRLLNVATLYKVLGGG 512 >gi|258541293|ref|YP_003186726.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256632371|dbj|BAH98346.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256635428|dbj|BAI01397.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256638483|dbj|BAI04445.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256641537|dbj|BAI07492.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256644592|dbj|BAI10540.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256647647|dbj|BAI13588.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256650700|dbj|BAI16634.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653691|dbj|BAI19618.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 509 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 121/490 (24%), Positives = 224/490 (45%), Gaps = 58/490 (11%) Query: 5 RAIFSLFI---VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN---------LINIDTLKW 52 R LF+ +LL+ CTVGP Y +P +P F + N + +W Sbjct: 8 RRRLGLFLATSMLLSACTVGPNY-QPDRMKVPAAFKETEEEEHPATPEEIERTNKEMTEW 66 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--- 109 W F D L +LV+ A++ N + A +RI A + A +P A++ + Sbjct: 67 WSLFKDPILTRLVEDAIKGNYDLQIAGQRILAERAIRDRSAAQWYPQMDANMGGGDVRYS 126 Query: 110 ----------------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 P + G + S W++D+FG+ RR +E+ +++ Sbjct: 127 INIDNWPLRPGNAANRPEASMLTYGVMAS-WELDMFGRIRRDVEAHEHQVEANIEGRRAL 185 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + ++S+L Y+ R + +I IA + + K ++L++ + +G + L + + +AE+ Sbjct: 186 LMGLLSELASDYMLLRVTQLQIKIATDNIRVAKDALDLTNKLYLEGVGNTLQIAQAQAEM 245 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI----- 267 + + L+ H I+ LLG K + L IP + I Sbjct: 246 DAQIAAREPLKTRVSQVTHAIAVLLG-----------KMPGELEEELKIPRPLPIVPEFP 294 Query: 268 ---PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP----SLSLNGSIALTHDNSFPGY 320 P+ +I NRPDIR E++ A + A+IG+A ++LYP L+ N + + + +F Sbjct: 295 ATLPSIVIANRPDIRMAERQYAVATAQIGVAVANLYPHFVVPLTFNPNASAMY-QAFQAN 353 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 W F +P+ GK+ + +R A+++A+ +T+++TVL KEVE+A+ + ++D Sbjct: 354 AMSWQFLLMASMPLMHGGKMTAEVRAAQAAAEAARLTYRQTVLQGFKEVEDAMAAWHDDI 413 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + +L A E + + Y G L++L ER T + ++AK + + V Sbjct: 414 EYAEQLHKAAEDSATASERARKLYGAGLVGFLEVLTTERTTLNAQNMEALAKLERLRDAV 473 Query: 441 DLYIAIGSGY 450 +LY A+G+G+ Sbjct: 474 NLYTALGAGW 483 >gi|293605759|ref|ZP_06688134.1| RND efflux system [Achromobacter piechaudii ATCC 43553] gi|292815850|gb|EFF74956.1| RND efflux system [Achromobacter piechaudii ATCC 43553] Length = 475 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 208/472 (44%), Gaps = 41/472 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIG-----NSKNLINIDT---LKWWESFNDTSLN 62 + AGCTVGP++ P P + + + G N+ + +WW F+ +L+ Sbjct: 6 LLAFTAGCTVGPDFAAPAAPEVASYTADGDGLPANAAQRVQSGADIPAQWWRLFHSDALD 65 Query: 63 KLVKIALQQNLTILQATERINAAKENI-LSVRADLFPSSYASIS---HRFIPNLKTNSTG 118 +LV+ ALQ + T+ QA + A EN+ L PS+ A++S + P+ Sbjct: 66 QLVRQALQTSPTLAQARATLRQASENLDAETGGRLLPSADANVSAARQKVDPSAFGVPVA 125 Query: 119 Q-----------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 Q +D + +D+FG RR +E A +D ++ A++++ + ++ + I Sbjct: 126 QPPPPFTLYNASIDVSYTLDVFGGNRRVLEGMAAQVDYQAHELQAARMSLAANVVTAAIR 185 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ERI+ +L ++ ++ + G ++ L E + + +P L+K Sbjct: 186 QADLSERIAATRDLLAAQERQEDIMRQRVAAGGIAQADLSNQELLLAQTRALLPPLDKQL 245 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKK 284 H ++ LG P + ++ L +P +I G+P+ L R RPDI E Sbjct: 246 SQTTHQLAVYLGVPPAALRAPPLRLAD-----LTLPPDIPTGVPSALTRQRPDILAAEAL 300 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A +G+A ++ YP +L GS + + G N W+ G L P+F G+++ Sbjct: 301 WHKASADVGVATANQYPQFTLTASFGSQRTSLGDLSNGVNV-WNLGLGLTQPLFRGGELR 359 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R AE+ + +++TVL +++V +AL ++ D A + ++ Sbjct: 360 ARKRSAEAGYEAAAAAYRQTVLEGLQQVADALRAVQTDADAFNAYDDAWRRAADAERIAQ 419 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 Y+ G S +LD +R + + + A A Y D L A+G G+ Sbjct: 420 GRYQAGGISHQSLLDSQRQLLQTRIARTEAD---AARYADTAALLHALGGGW 468 >gi|319792535|ref|YP_004154175.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315594998|gb|ADU36064.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 470 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 112/457 (24%), Positives = 226/457 (49%), Gaps = 32/457 (7%) Query: 20 VGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 VGP+Y P PL P + + + N + D WW+ FND L+ L AL + T Sbjct: 18 VGPDYKAPETPL-PVSWKLEAPWRQATPNDV-ADKGAWWKRFNDAQLDALQDKALAGSPT 75 Query: 75 ILQATERINAAKENILSVRADLFP-------SSYASIS-HRFIPNLKTN--STGQ----- 119 ++ A R+ A+ N+ + A FP +S IS +R + N T ST Q Sbjct: 76 LVIANARLAQARANLDASSASRFPQLGLGARASRLKISANRPLTNYATTNASTVQNDFAL 135 Query: 120 -LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L++ +++DL G+ +R +E + A+ + + A + +L + + + +Y + R + + Sbjct: 136 SLNASYELDLAGRVQRTVEGATASAEQSAADLANTRLVLTADVANNYFNLRSTDIELDVL 195 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + L ++ +EL + GA S L + + +A +++ + + L+K H ++TL Sbjct: 196 ARSIGLQRRALELVTARHDLGAVSGLDVAQQQALLETTLTQVDVLKKQRAQYEHALATLT 255 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G PA F + +P + +G+P+++++ RPD+ E+ +A + A+IG+A + Sbjct: 256 GTPAPSF--ALPVDLREIRPP---AVPLGVPSEILQRRPDVASAERSMAAANAQIGVATA 310 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS ++ ++ + ++ F G + WS G +FD G++++N+ A++ Sbjct: 311 AFYPSFIISPTVGVDSRLIESLFNGPSLLWSVGVSATQVLFDGGRVRANVDFAKAGYDAT 370 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ TVL A++EVE+ +T ++ T+ Q AV ++ + ++ Y G + LD+ Sbjct: 371 VGNYRRTVLVAMQEVEDGITGLSALDSATTQAQAAVAAARRVLDMATSRYEGGASTYLDV 430 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +++ VE + + Q + V L A+G ++ Sbjct: 431 ITAQQSLLTVERQAAQLQGQRLLTSVFLVKALGGDWD 467 >gi|154148285|ref|YP_001406151.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter hominis ATCC BAA-381] gi|153804294|gb|ABS51301.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter hominis ATCC BAA-381] Length = 482 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 109/456 (23%), Positives = 203/456 (44%), Gaps = 24/456 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKLVK 66 F + +L AGC KP P + F NS N+ + WW++FND +LN L+ Sbjct: 7 FCITAILFAGCNF-----KPETPQISANFKADFNSSNINDF----WWKNFNDENLNMLID 57 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQL--- 120 AL+ N + A I A+ ++ + + P+ S +++ P ++ + Sbjct: 58 SALKNNSDLALALNNIEYARVSLGLSKLEFLPNFTLSGSAVRQNNFPQAPDSNHANIYQI 117 Query: 121 --DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++++DL+G+ R ++++ +N + D A+L++ S + Y KE+ I Sbjct: 118 GAGLNYELDLWGKVRNSVDAADSNFKATIYDYDNARLSIASSVANLYFKFLSLKEQEKIL 177 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L Y++ + GA + + + +A+++S + + + +S + Sbjct: 178 TQTLAAYEQMANFRANQLKAGAINNIVYYQSKAQVQSATASLIATKTQINATNTALSIMT 237 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G E LH K S F IP GIP+DL+ +R D+ +L + +G K+ Sbjct: 238 GKNYDEILHNNIKASQTFPTLPKIPA--GIPSDLLLHRADVASALGRLKATNFLVGAQKA 295 Query: 298 DLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + +PS SL G+ D F + W+ G L P+ D G+ K I A Sbjct: 296 NYFPSFSLTGAFGFASTEFDRLFVNNASSWNIGGSLVGPLLDFGRTKKRIDLANLDQNAS 355 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +I + +T+ A +V +AL S+ L+ + ++ + + + Y G +++ Sbjct: 356 FINYDKTLKTAFGDVRDALVSVKNSDIRTKTLKDLLATQQQVYNAAKLRYDSGYSDHIEL 415 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD ER +++LS+A + S V LY A+G G+ Sbjct: 416 LDSERNLLSAKLNLSMANYERYASEVALYKALGGGF 451 >gi|167752175|ref|ZP_02424302.1| hypothetical protein ALIPUT_00417 [Alistipes putredinis DSM 17216] gi|167660416|gb|EDS04546.1| hypothetical protein ALIPUT_00417 [Alistipes putredinis DSM 17216] Length = 461 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 113/454 (24%), Positives = 206/454 (45%), Gaps = 37/454 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC + YT+P + G + + + + + W E F D L +L++ L N + Sbjct: 15 GCGIYKPYTRPEEIKTDGLYGQGVETVDTMTLGNISWQEMFTDPYLQQLIQQGLDNNTDL 74 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-----------TGQLDSDW 124 A R+ A+ + S R PS F PN +S T + + W Sbjct: 75 QSAYWRVKEAEATLKSARLAYLPS------FNFAPNGGVSSLTNPWNATWTYTVPVTASW 128 Query: 125 KIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++D+FG+ +R ++ LA Y Q + VI+ + Y + I+ + Sbjct: 129 EVDIFGKLTNSKRRAKALLAQ-SQEYQQA--VRTQVIASVANLYYTLLMLDAQYEISSET 185 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + + + + G T++ ++ + EA SIE+ + LE R +++S+LLG Sbjct: 186 AEKWFETVNTMRAMKEAGMTNEAAVSQAEANYYSIETSLFDLEYQIREMENSLSSLLGEA 245 Query: 241 ATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 F ++ + + Q +P N +GIPA ++ NRPD++ E LA + A+S Sbjct: 246 PRSF----ERGTLDEQ---ILPENLVVGIPAQMLSNRPDVKNAEYSLAQAFYNTAGARSA 298 Query: 299 LYPSLSLNGSIALTHDNSFPGYN-THWSF--GPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YP+LSL+G++ T+D + W F L PIF+ G+ ++ +R A++ QE Sbjct: 299 FYPALSLSGTLGWTNDGGVTTLDPAKWIFNAAASLVQPIFNAGRNQAQLRIAKAQQQEAL 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++Q+T+LNA EV NAL + V Q V + ++ + + R G + L++L Sbjct: 359 LSFQQTLLNAGAEVNNALAKCQSARSKVDLRQKQVASLETAVESTQLLMRHGSTTYLEVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ ++ + ++ VDLY A+G G Sbjct: 419 TAQQTLLSAQLSQINDRFSEIQAIVDLYHALGGG 452 >gi|254244509|ref|ZP_04937831.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa 2192] gi|126197887|gb|EAZ61950.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa 2192] Length = 479 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 208/463 (44%), Gaps = 20/463 (4%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L C++ P Y +P P+ + + IDTL W D L +L Sbjct: 7 GVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL N ++ Q I AA+ RAD P A+ + R +L + ++ Sbjct: 67 VDVALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAL 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + + L + GA + L + + +E E++ R Sbjct: 187 RRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQERNLRQKQQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ ++ +S +P L I G P++LI RPDI E +L A Sbjct: 244 AFNALVLLLGSDDAAQAIPRSPGRRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS + F G + WSF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ T+ A +EV +AL + + ++ L+ +++ L+ Y G Sbjct: 364 ARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGV 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 424 DNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 466 >gi|312130469|ref|YP_003997809.1| rnd efflux system, outer membrane lipoprotein, nodt family [Leadbetterella byssophila DSM 17132] gi|311907015|gb|ADQ17456.1| RND efflux system, outer membrane lipoprotein, NodT family [Leadbetterella byssophila DSM 17132] Length = 473 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 229/479 (47%), Gaps = 44/479 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 IF + ++L++ C V EY + LP F K+ +N+ + W + F D+ L L+ Sbjct: 5 IFIILLILVSACKVKQEYVR-DTSNLPENFRNQVVKDTLNVANIPWKKFFKDSLLVALID 63 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF--- 108 AL +N+ + A I +E +L +A+ FP+ Y+S + ++ Sbjct: 64 TALSENIPLNIAARDILIVQEQLLQKKANFFPTLTTSPEFYGENHSVNRYSSPNSKYYKD 123 Query: 109 --IPNLKTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 IP+ S Q S W+ D++G+ R ES+ A L A+ + ++++++ Sbjct: 124 KEIPDFMFVSRRQYLIPFRSTWEADIWGKLARMKESTQAKLAGTLAEYQALQTDLVAEVA 183 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY + E++ +A L L + ++L+ L+F G + L++ + E ++ + + IP Sbjct: 184 ISYYNLLVLDEQLKVAQTNLALTQNTLDLTKLQFKAGMVTSLAIQQTENQLLNATALIPK 243 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 +++ + + +L+G +F + ++ N I G P DL+RNRPDI+ Sbjct: 244 IQREINREENYLKSLMG----QFPGKINREPNLDGERFSEKIFTGTPMDLLRNRPDIQAD 299 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLYLPIF 335 E L + A +AK++ YP+L+L + L D+ G + + +F L PIF Sbjct: 300 EYNLIAAYADADVAKANRYPTLALKADLGL--DSQIFGVLFNPIGSLYATFSSSLLTPIF 357 Query: 336 DKGKIKS--NIRRAE-SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 K+K+ NI + E S A +Q+ + T++ A+KEV + + +I + ++ + Sbjct: 358 QNRKLKTAENIAKIEKSQAADQF---RNTLVKAVKEVSDEVNNIEKLEEEYLIASERLAN 414 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 KK++ + + Y+ G + L++++ + E+ L + + + + LY +G G+N Sbjct: 415 AKKAVQNAALLYKSGMANYLEVINAQSNALNNEMALFDIRLDILTANIQLYRKLGGGWN 473 >gi|27379566|ref|NP_771095.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27352718|dbj|BAC49720.1| blr4455 [Bradyrhizobium japonicum USDA 110] Length = 494 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 123/483 (25%), Positives = 215/483 (44%), Gaps = 56/483 (11%) Query: 5 RAIFSLFIVLLA----GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 RA L ++ LA GC + + P + + PTQ+ + +L WW F Sbjct: 24 RAARWLVVLCLAAGSGGCVLTQDLPDPALDV-PTQYKYAGKGD--TPPSLDWWRGFRSAE 80 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------- 113 L +L++ A NL I A RI A A L PS S + Sbjct: 81 LTQLMEEAQTVNLDIAAAVSRIVQADAQARQAGAALLPSVSTGGSETYSRTSGSSSSGLT 140 Query: 114 ------TNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N + L + +++D +GQ R ++++ ++ D+ L ++ + +Y Sbjct: 141 NGGREVVNYSASLSASYQLDFWGQNRDALQTAEETANANRFDRDVVALTTLASVANAYFQ 200 Query: 167 A-------RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 R + I+ A +ILD K+ + G + L + + E+ + + ++ + Sbjct: 201 VLTSQDRLRTSQRNIASAQRILDAVKE-------RRKAGTGTDLDVAQQESVVANQKALV 253 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDI 278 P L ++ NV+ ++ L+ P E + + + + IP + G+P++L+ RPDI Sbjct: 254 PPLRQTLDQNVNALAVLVSRP-PESVRVLGGSLDR----IAIPRVTPGLPSELLTQRPDI 308 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPI 334 R QE +LA + A IG A++ +P++ L G+ + H +F G PI Sbjct: 309 RRQEAQLASATANIGNARAQFFPTIQLTGNGGYQSSALVSLFQPHAAFFQLVGSATQ-PI 367 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ---HAVE 391 FD GKI N A++ E T+++T++ A +V+NAL SI K+ KLQ V Sbjct: 368 FDGGKILGNFEFAKARQDELLQTYRKTIVQAFADVDNALFSI---KQTTIKLQLQRDVVT 424 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +++ LS R G ++ +L+ + + E LS A QLA+ + V LY A+G G Sbjct: 425 ASRRAFDLSEQQLRAGTADIVTVLNTQLTLFQAEDALSQA--QLARLLAIVSLYQALGGG 482 Query: 450 YNP 452 + P Sbjct: 483 WEP 485 >gi|117618066|ref|YP_857413.1| outer membrane protein OprM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559473|gb|ABK36421.1| outer membrane protein OprM [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 471 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 219/457 (47%), Gaps = 28/457 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LL GC++ P+Y +P +P Q + S W + F D +L +L+ AL+ N Sbjct: 12 LLLGGCSMAPDYQRPELP----QGAAWQSNQAGEAAVSPWRQQFLDPALQQLIATALENN 67 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDSDW----- 124 + A + A + RA P+ A+ S + +L + G + S + Sbjct: 68 RDLRIAALNVEAYEARYRIQRAAQLPTLAANGSGTRQQGSDDLSSTGQGTISSQYGANIG 127 Query: 125 ----KIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIA 177 ++DLFG+ + ++ L++ AQV+ + + +I+ + +Y++ +E ++++ Sbjct: 128 ITSYELDLFGRIQSLKDQA--LENYLAQVETQRSTQIALIASVANAYLNLLADQELLALS 185 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L +++ L+ K+ GA S++ L + ++S + + ++ + + + ++ LL Sbjct: 186 EATLATEQESYGLTEHKYRLGAASEMELAQGRTALESAKVSLAQYQRQVKQDRNGLALLL 245 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G T M + + + L I +G P+ L++ RPDI E L + A IG A++ Sbjct: 246 G---TGVPALMTEPATLAEVQL-AAIPVGAPSSLLQQRPDILAAEHSLKAANANIGAARA 301 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P++SL GS + F G W+F P++ LPIFD GK +++ AE S ++ Sbjct: 302 AFFPTISLTATAGSASNQLSGLFDGGTGTWTFMPQINLPIFDGGKRIADLDVAEVSTRQA 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++++++ A KEV + L + + +K + Q VE ++ L+ + Y +G S L Sbjct: 362 VASYEKSIQTAFKEVADTLGAQVDYQKQLQAQQALVEANQTYFKLAEVRYEKGVDSYLTR 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R+ + L + + V LY A+G G+ Sbjct: 422 LDAQRSLFSAKQGLISTRLAQLSNQVALYKAVGGGWQ 458 >gi|300310854|ref|YP_003774946.1| NodT family protein [Herbaspirillum seropedicae SmR1] gi|300073639|gb|ADJ63038.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Herbaspirillum seropedicae SmR1] Length = 507 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 123/482 (25%), Positives = 240/482 (49%), Gaps = 45/482 (9%) Query: 4 LRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTL---KWWESFN 57 L+ + ++ + + LA C+VGP+Y +P M P F G N K D + KWWE F Sbjct: 9 LKPLLAMLVASLALAACSVGPDYVRPQMDTGPAIFKEGQNWKPAQPRDLVADGKWWEMFG 68 Query: 58 DTSLNKLVKIA--LQQNLTILQATERINAAKENILSVRADLFPS---------------- 99 D LN LV QNL + +A R +A + S R+ P+ Sbjct: 69 DPQLNALVAQVDISNQNLALAEANFR--SAVALVQSSRSAYSPTLSASAGASRGSSGSAG 126 Query: 100 --SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + S +++ + T L + W+ D++G+ RR +ESS A+ ++ A + A+L+ Sbjct: 127 ASSSNAASGSSAGSVRNSYTFSLTAAWEADIWGKVRRDVESSQASAQASAADLAAARLSA 186 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+ R + + + + Y+++++++ ++ G +K +++ + ++KS + Sbjct: 187 QAQVAQNYLQLRVLDAQQQLLEETVQAYERSLQVAQNQYAAGMVAKSDVIQAQTQLKSAQ 246 Query: 217 SDIPTLEKSF-RMNV-HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + L+ R V H I+ L+G +F + + P+ G+P+ L+ Sbjct: 247 AS--ALDNGVTRAQVEHAIALLVGKTPAQFALPRAPLAA-----VAPPVPQGVPSMLLER 299 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RPD+ E+++A + AKIG+AK+ +PSL+L+ S ++F + T WS GP+L Sbjct: 300 RPDVAAAERRVASANAKIGVAKAAYFPSLTLSASGGY-QSSTFADWFTLPGRVWSLGPQL 358 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IFD G + +A ++ T+++TVL A +EVE+ L ++ ++ A+ Sbjct: 359 AQTIFDGGARAAATDQAIATYDGTVATYKQTVLTAFQEVEDNLAALRILEQEAAVQGEAL 418 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSG 449 + +++++L Y+ G S ++++ + E+ L+I R++A S V L A+G G Sbjct: 419 QAARQAVTLVNNQYKAGTVSYVNVITAQATALSAELSSLNILNRRMAAS-VLLAKALGGG 477 Query: 450 YN 451 ++ Sbjct: 478 WD 479 >gi|116052739|ref|YP_793056.1| outer membrane protein OprJ [Pseudomonas aeruginosa UCBPP-PA14] gi|115587960|gb|ABJ13975.1| outer membrane protein OprJ [Pseudomonas aeruginosa UCBPP-PA14] Length = 479 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 208/463 (44%), Gaps = 20/463 (4%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L C++ P Y +P P+ + + IDTL W D L +L Sbjct: 7 GVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL N ++ Q I AA+ RAD P A+ + R +L + ++ Sbjct: 67 VGVALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAL 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + + L + GA + L + + +E E++ R Sbjct: 187 RRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQERNLRQKQQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ ++ +S +P L I G P++LI RPDI E +L A Sbjct: 244 AFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS + F G + WSF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ T+ A +EV +AL + + ++ L+ +++ L+ Y G Sbjct: 364 ARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGV 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 424 DNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 466 >gi|46581219|ref|YP_012027.1| outer membrane efflux protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450640|gb|AAS97287.1| outer membrane efflux protein [Desulfovibrio vulgaris str. Hildenborough] Length = 536 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 57/489 (11%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGN--------------------------------- 40 ++ GCT+ PEY +P P +P+ ++ G Sbjct: 17 VVGGCTLAPEYRRP-APAMPSAWNAGQDVAPGAGQVAQVAAQAPDATAPAGSSGAFAHSG 75 Query: 41 --SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 + + T W + D + +LV +AL N + A +I A+ RADLFP Sbjct: 76 APTGAQPAMQTPDWRQVVVDAPMARLVDVALSSNRDLRVAVLQIEKARAQHAIARADLFP 135 Query: 99 ---SSYASISHRFIPNLKTNSTGQLD---------SDWKIDLFGQRRHI-ESSLANLDSA 145 +S A + R +L G + S +++DLFG+ R + E +L S Sbjct: 136 HIDASGAGNAGRTAQSLSPTGEGYVSHAYTVGVGFSAYELDLFGRVRSLKEQALERFLST 195 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 A +L +++++ +Y+ +E++++A +IL+ + + E+ ++ G +L + Sbjct: 196 DAAARSVQLTLVAEVGQAYLTLVADREQLALAREILETEQASFEVVQSRYGHGIAGELDV 255 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI 265 + + + ++ E + + ++ LLG P T + ++ ++ P +P Sbjct: 256 ARARTTVDTARVNVAAAEAKVTADENALALLLGTPVTPDMVPARRLAD-VVPLADVPA-- 312 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNT 322 G+P++++ RPD+ E L + A IG A++ +P + L G+ + +N F Sbjct: 313 GVPSEVLTRRPDVVAAEHALKAANANIGAARAQFFPRIGLTASYGNASNDMENLFRAGAH 372 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 WSF P++ LPIF G I++ + AE+ +++ V A +EV + L + Sbjct: 373 TWSFVPQVTLPIFHAGAIRAGVETAEADRDIYVAQYEKAVQTAFREVSDTLAQ-GRSLAV 431 Query: 383 VTKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 T Q + VE S SL+ Y G LD LD +R+ A +L + + Sbjct: 432 QTGAQTSLVEATATSYSLASKRYESGIAGYLDKLDAQRSYAVARQNLIAMHLARQNNRLT 491 Query: 442 LYIAIGSGY 450 L+ A+G G+ Sbjct: 492 LFKALGGGW 500 >gi|114326893|ref|YP_744050.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] gi|114315067|gb|ABI61127.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] Length = 532 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 120/469 (25%), Positives = 220/469 (46%), Gaps = 35/469 (7%) Query: 9 SLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNK 63 S FI ++AGC + P+Y P+ + + G + DT KWW F D +LN Sbjct: 20 SAFICSGIVAGCNLAPDYKVPNFIVPASWHGQGPFREATPADTQIPQKWWVLFQDPTLND 79 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRFIPNLK 113 L + A+ N + A ER A+ I+ VR++L P + ++ S + P Sbjct: 80 LEERAVVNNADLQAAAERFLQARSMIMKVRSELLPHVGIQAGASNNRQSADSLFYAPGSA 139 Query: 114 TNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N + G + S W+ D + + R I ++ + A A+L++ ++L YI R Sbjct: 140 LNQSDTFYGAVAS-WEPDFWSRIRNRIRATEDFVQQRAADYAGARLSMEAELASEYIMLR 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + I +Q + Y K IE++ + + A L L++ + + ++ + ++ Sbjct: 199 GLDAQEEILNQAIAYYNKAIEVTGAQVSNQAAPPLDLIRAKNRLYVTQAQELDIRAERQV 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L + F H K +F + L++ RPDI E+K+A++ Sbjct: 259 VEHAIAILTNASPSTF-HIPAKDHFDFPNVNVPVSVP---SVLLQRRPDIASSERKMAEA 314 Query: 289 VAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG+A++ YP +SL NG + N N+ WS+G + +PIF+ G ++ ++ Sbjct: 315 NRMIGVARAAFYPDVSLAANGGFDASGFNLGTLQNSLWSYGAAVNIPIFEGGLRRAELQN 374 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + S +E ++ VL+A KEVE+ L+ K+ V KL+ AV+ + +++M Y Sbjct: 375 SWSVYRETRDDYRSKVLSAFKEVEDGLSKTTLYKQEVVKLEEAVKTASQMQAITMTLYTG 434 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQL----AKSYVDLYIAIGSGYN 451 G + LD + + A ++D ++K Q+ KS V+L ++G G++ Sbjct: 435 GLSNYLDAIIAQEA----KLDALMSKVQVHVKYEKSVVELIRSVGGGWS 479 >gi|222833740|gb|EEE72217.1| predicted protein [Populus trichocarpa] Length = 762 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/413 (24%), Positives = 196/413 (47%), Gaps = 17/413 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 +WW +F D +L+ LV A N +I A R+ A+ S A+ P + + R Sbjct: 334 QWWLAFADPALDALVDKATLDNQSIQAAAARLAEARALARSANAERMPQLGLGAGATRGA 393 Query: 110 PNLKTNST-------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 K + T L+ +++DLFG+ + ++S + + A + +L V +++ Sbjct: 394 GLDKASGTRPATLVNAGLNLSYEVDLFGRISQAADASRLDAEGREALLQSTRLAVQAEVA 453 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R ++ + ++ Y+ + LS + G ++L + +++AE+ + ESD Sbjct: 454 QTYLQLRALDAERALMRETVEAYRDTLRLSERRLQAGDIAELDVARIQAELSATESDALA 513 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L++ H ++ L+G A+ F + P+ I G+PA ++ RPDI Sbjct: 514 LDRQRAQVEHALAVLVGDSASRF-GLGEGAWTTALPS----IPAGVPATVLMRRPDISAA 568 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 ++ + + +++G+AK+ +PS+SL G+ + F W G L LP+FD G Sbjct: 569 QRAVFAAQSRVGVAKTAWFPSISLTGAAGHASPEVGDLFKWSMRSWGVGALLSLPLFDGG 628 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++ ++ A + +++ L A +EVE+ L+SI ++ T AV K++ S Sbjct: 629 RREAGVQAAGAQLDAALAAYRQQALVAFQEVEDQLSSIRILQEQSTVQGQAVVAAKRATS 688 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS YR G S LD+LD R+ + K ++ V L A+G G++ Sbjct: 689 LSDTRYRNGYVSQLDLLDARRSELRNRRQALQVKSAQYQAAVGLIRALGGGWD 741 >gi|21232112|ref|NP_638029.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767760|ref|YP_242522.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|21113859|gb|AAM41953.1| outer membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573092|gb|AAY48502.1| outer membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 497 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/480 (23%), Positives = 212/480 (44%), Gaps = 31/480 (6%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----------I 47 M +R + V +L+GCT+ P Y +P P+ P QF+ + + I Sbjct: 1 MTPIRMTLAALAVTSVLSGCTLMPRYARPDAPV-PAQFAGATAAATVASEAAASAETPVI 59 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---- 103 + W E F D +L +++++AL N + A I A+ RA L P A+ Sbjct: 60 ADIGWREVFTDPALQQVIQLALDNNRDLRVAALNIEVARAQYRVERAALVPGVDATGTAN 119 Query: 104 ----ISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKL 154 S +P +T S S +++DLFG+ R + E +L S + Sbjct: 120 NARTPSELAVPGQPPVFRTYSANVGVSAYELDLFGRVRSLKEQALQQFLSTAEARRSTHI 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++++ + +Y+ +E + +A L + L F G S+L+L + + ++S Sbjct: 180 SLVADVATAYLTLAADQELLQLAQSTLTSQSDSYRLQQRSFELGVASQLTLRQAQTTVES 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 D+ + + + L+G E L + + N+ + G+P+ L++ Sbjct: 240 ARVDVERYTAQVAQDRNALVLLVGTQLPESLLPRALPDGASVEGNVLAAVPAGVPSQLLQ 299 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKL 330 RPDI E+ L + A IG A++ +PS+SL ++ + + F WSF P+L Sbjct: 300 RRPDILEAERNLRAANANIGAARAAFFPSISLTATLGSSSSSLSGLFESGTRAWSFVPQL 359 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP+F+ G+ ++N+ A+++ + +++++ A +EV +AL + + + Q V Sbjct: 360 TLPLFNAGRNRANLDMAKANRDIEVARYEKSIQTAFREVSDALAQRDTLGRQLQAQQALV 419 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S LS + +G S L LD +R+ + L + + V Y A+G G+ Sbjct: 420 DATADSYRLSQARFERGIDSYLQALDAQRSLYGAQQTLITTQLSRITNLVTFYKAMGGGW 479 >gi|254255098|ref|ZP_04948415.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124899743|gb|EAY71586.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 478 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 213/460 (46%), Gaps = 38/460 (8%) Query: 17 GCTVGPEYTKPHMP-----LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GC V P P +P L P + ++D WW F+D L++L+ L Sbjct: 16 GCAVQPAQ-HPALPDSVRSLAPAAWDTDVPH--ADVDAATWWAQFHDPVLDRLIATVLDG 72 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN----LKTNSTGQLDSD 123 NL + A ER+ A+ + RA L P +++AS + + +P ++ G L Sbjct: 73 NLDLQAAAERVKQAQALTVQKRAALLPELDATAHASDARQNVPPPLGYVRQAGAG-LALS 131 Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W D+FG +R + ++ A L D +L + + +Y+D R ++++ I Sbjct: 132 WSPDVFGGERLDLLAARAELVGHKHAEDAMRLALAADTASAYVDLRWAQQQLKILQDNAT 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ +EL+ + G +++L + + + ++ ++E+ IP ++ I+ G Sbjct: 192 IRQRALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTHAQIAHQLNLIAVYSGRTPE 251 Query: 243 EFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + Q + P P + P+ + RPD+ ++ A++G+AK++ YP Sbjct: 252 SVDRLVLAQPGDIPAPPSGSPTTL--PSQALLRRPDVLTAYAQVERRAAQVGVAKAERYP 309 Query: 302 SLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 SLN G +A ++ DN F + S PIF+ G+I ++I ++ES Sbjct: 310 KFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIFNAGRITADIAQSESRM 362 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +E + ++T+L A++EVE+A ++ + +L A+ K++ L+ Y+ G Sbjct: 363 RESELALRQTMLQALREVEDARANLVSTDQATQRLGSALAASDKALGLANQLYKGGATDF 422 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L + + L+ +R+ A + V LY ++G G++ Sbjct: 423 LDVLSAQEVYLRDADSLNQVRREHALAAVALYRSLGGGWS 462 >gi|226941050|ref|YP_002796124.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] gi|226715977|gb|ACO75115.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] Length = 471 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 128/482 (26%), Positives = 228/482 (47%), Gaps = 45/482 (9%) Query: 1 MNILRAIFSLFIVLLA-GCT-VGPEYTKPHMPLLPTQF--SIGNSKNLINI-DTL--KWW 53 MN + SL +LLA GCT + P+Y +P +P+ QF S+G ++ ++ DTL W Sbjct: 1 MNHPMIVTSLAAMLLATGCTTMAPDYRQPALPV-AGQFPDSVGATRPEGSVSDTLLADWR 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP 110 F D L L+++AL N + A +I+ A+ RADL PS S S S R Sbjct: 60 AFFPDEQLKTLIELALTHNRDLRVAALQIDKARARYQIQRADLLPSIAASGGSESQRLPG 119 Query: 111 NLKTNSTGQLD---------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 +L N L + +++D FG+ + + +++L + A+++++S++ Sbjct: 120 DLSGNGASTLARQYSASVGLTSYEVDFFGRIQSLKDAALETFLATEEARRAAQISLVSEV 179 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ +E++ +A L + EL +F G+ S L L + + ++S ++ Sbjct: 180 ANAYLAYAADREQLKLARDTLGNRRAEYELVRRRFELGSASALDLNQAQTGVESARGEVA 239 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 E + + + ++G L + P + G+P+DL+ RPDI Sbjct: 240 RYEALLAQDRNALVLVVGTSVDPALLPTAPVAELPTP---AALPAGLPSDLLLRRPDIVE 296 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS++L S+ + F + WSF P++ LPIF+ Sbjct: 297 AEHALKAANANIGAARAAFFPSITLTASVGTASSDLSGLFDAGSRSWSFMPQIRLPIFEG 356 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 G+ +N+R +E+ +++ + A EV + L +I+E T L A L Sbjct: 357 GRNLANLRVSEADRDISLAQYEKAIQKAFTEVADTLAVQDTIDERLSAQTALTEATGL-- 414 Query: 395 KSMSLSMINYRQGRYSLLDILDIERA--TAK---VEVDLS-IAKRQLAKSYVDLYIAIGS 448 S LS + +G S L++L +R+ TA+ +EV L+ +A R + LY A+G Sbjct: 415 -SYRLSQARFDKGIDSYLNVLVAQRSDYTARQGLIEVQLNRLANR------IALYRALGG 467 Query: 449 GY 450 G+ Sbjct: 468 GW 469 >gi|295699190|ref|YP_003607083.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295438403|gb|ADG17572.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 521 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/445 (25%), Positives = 210/445 (47%), Gaps = 35/445 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 CTVGP+Y +P + P + S I D WW F D +L L AL Q Sbjct: 30 CTVGPDYQRPQAEVPPEWHTDSFWRVAAPSHAPIAPD---WWTGFADPTLATLETRALAQ 86 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYAS---ISH-RFIPNLKTNSTGQLDSD 123 N T+ A+ AK + + A P S+ AS ISH R + N T + + ++ Sbjct: 87 NQTLAAASAHYEQAKATLANTSAQRVPEVDFSAQASRFRISHDRPLTNYATPTQSTVQNN 146 Query: 124 --------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + DLFG+ RR +E + A+ + + + A+L + + L Y R I Sbjct: 147 IQLGPTLSYDTDLFGRIRREVEGAQASAEQSADDLANARLVLTTDLATDYFSLRELDSEI 206 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + +Q + L +K ++ + + G+ S L +++ ++++ + L H I+ Sbjct: 207 DVLNQSVKLQQKALDYVNTEHDLGSVSGLDVLQQKSQLDATRVQAQLLLNQRAQFEHAIA 266 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G PA +F ++ + + +P + +G+P+D+++ RPD+ E+ +A + A+IG+ Sbjct: 267 ALVGVPAPQFA--IEPKVLDIKPPT---VPLGVPSDVLQRRPDVASAERAMAAANAQIGV 321 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ +PSL L I N W+ G + IFD G+ +N++ A Sbjct: 322 AKAAFFPSLMLTPGIGWESTEFANLLSAPTLMWTLGAAVGQVIFDGGRRAANVKFASEGY 381 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +++TVL+A ++V++ +T ++ + + AVE ++ +SL+ Y G + Sbjct: 382 KATEANYRQTVLSAFQQVQDGITGLSVLDGAAKQSREAVEDAQRLLSLANDRYSGGLVAY 441 Query: 412 LDILDIERATAKVE-VDLSIAKRQL 435 L+++D + + E D+ I +QL Sbjct: 442 LNVIDAQESLLTSERTDVQIHGQQL 466 >gi|311234887|gb|ADP87741.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris RCH1] Length = 542 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 57/489 (11%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGN--------------------------------- 40 ++ GCT+ PEY +P P +P+ ++ G Sbjct: 23 VVGGCTLAPEYRRP-APAMPSAWNAGQDVAPGAGQVAQVAAQAPDATAPAGSSGAFAHSG 81 Query: 41 --SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 + + T W + D + +LV +AL N + A +I A+ RADLFP Sbjct: 82 APTGAQPAMQTPDWRQVVVDAPMARLVDVALSSNRDLRVAVLQIEKARAQHAIARADLFP 141 Query: 99 ---SSYASISHRFIPNLKTNSTGQLD---------SDWKIDLFGQRRHI-ESSLANLDSA 145 +S A + R +L G + S +++DLFG+ R + E +L S Sbjct: 142 HIDASGAGNAGRTAQSLSPTGEGYVSHAYTVGVGFSAYELDLFGRVRSLKEQALERFLST 201 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 A +L +++++ +Y+ +E++++A +IL+ + + E+ ++ G +L + Sbjct: 202 DAAARSVQLTLVAEVGQAYLTLVADREQLALAREILETEQASFEVVQSRYGHGIAGELDV 261 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI 265 + + + ++ E + + ++ LLG P T + ++ ++ P +P Sbjct: 262 ARARTTVDTARVNVAAAEAKVTADENALALLLGTPVTPDMVPARRLAD-VVPLADVPA-- 318 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNT 322 G+P++++ RPD+ E L + A IG A++ +P + L G+ + +N F Sbjct: 319 GVPSEVLTRRPDVVAAEHALKAANANIGAARAQFFPRIGLTASYGNASNDMENLFRAGAH 378 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 WSF P++ LPIF G I++ + AE+ +++ V A +EV + L + Sbjct: 379 TWSFVPQVTLPIFHAGAIRAGVETAEADRDIYVAQYEKAVQTAFREVSDTLAQ-GRSLAV 437 Query: 383 VTKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 T Q + VE S SL+ Y G LD LD +R+ A +L + + Sbjct: 438 QTGAQTSLVEATATSYSLASKRYESGIAGYLDKLDAQRSYAVARQNLIAMHLARQNNRLT 497 Query: 442 LYIAIGSGY 450 L+ A+G G+ Sbjct: 498 LFKALGGGW 506 >gi|163851944|ref|YP_001639987.1| RND efflux system outer membrane lipoprotein [Methylobacterium extorquens PA1] gi|163663549|gb|ABY30916.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium extorquens PA1] Length = 532 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 200/428 (46%), Gaps = 34/428 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLK------------ 51 A L +GC VGP+Y++P + P F G + +L + K Sbjct: 42 ATVCAVAALTSGCLVGPDYSRPSVET-PLGFKQGGMREDSLAYVQAQKGWRPAAPNDAAE 100 Query: 52 ---WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---IS 105 WW +FND +L++L++ N + + A+ + RA LFP+ + Sbjct: 101 RGDWWRAFNDPTLDRLIRSIDVDNQNLRAQVAVYDQARALVAQARAALFPTVIGAPGITR 160 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 R + +T + Q ++W++DLFG RR IES +A+ ++ + + + +L++ ++L +Y Sbjct: 161 SRALGAERTTVSLQGQANWELDLFGGIRRQIESDVASAQASASDLALVRLSLQAELATNY 220 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R+ + + ++ +K+++ ++ ++ G ++ ++ + ++++ ++ + ++ Sbjct: 221 LQLRYQDSLKRVLEENVEGFKRSLSIAENQYNAGVAARSDVITAQTQLQTTQASLIAVDL 280 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQE 282 H ++ L G P +E F P P + +GIP+DL+ RPDI E Sbjct: 281 QRATFEHAVAILTGRPPSEV-------KLPFAPLPVRPPSVPVGIPSDLLERRPDIAGAE 333 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + + +IG+A S YP+++L+ S T + F N WS FD G Sbjct: 334 RLVQAQSEQIGVAVSAFYPTVTLSASGGFSGATSNGVFSAANRVWSIAANGSQVFFDGGA 393 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + ++ A ++ + +++TVL A EVEN L + + K AV ++++ + Sbjct: 394 RAAVLQTARAAYEAAVANYRQTVLTAFGEVENGLAGVRILARQQAKQDEAVASARRAVEI 453 Query: 400 SMINYRQG 407 ++ YR G Sbjct: 454 TLNEYRAG 461 >gi|332284259|ref|YP_004416170.1| outer membrane efflux protein [Pusillimonas sp. T7-7] gi|330428212|gb|AEC19546.1| outer membrane efflux protein [Pusillimonas sp. T7-7] Length = 510 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 117/485 (24%), Positives = 218/485 (44%), Gaps = 51/485 (10%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGN---------SKNLINIDTL 50 L A+ L + LAGC++ P+Y +P MP+ P Q+ ++ N S + N L Sbjct: 8 LTALPVLVSLALAGCSLAPKYERPAMPV-PGQYPDSDAVSNTGPRSASAVSPQVGNSSDL 66 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISH 106 W E F D L L+ AL N + A R+ A+ +D P+ + A I+ Sbjct: 67 GWSEFFTDARLKALISEALANNRDMRIAVGRVEEARAQYGIAASDRLPTIGIGANAQIT- 125 Query: 107 RFIPNLKTNS----------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLN 155 R NL+ NS G + +++D FG+ R++ + A AQ +N Sbjct: 126 RNPENLRANSDSGSVSRYYQAGVGMTSFELDFFGRVRNLSEAAFQQYLATAQAGRTVHIN 185 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++++ +Y R ++ ++ +EL ++ G S L L + +++ ++ Sbjct: 186 LVAQVAEAYFRLRTTEQLKALMQSTQQSRTSTLELVQARYDGGVASALDLNQARSQLDTV 245 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 +D+ +E++ ++ ++ LLG P E L K + + + I +G+P+DL+ R Sbjct: 246 RADLVAIERAEAQAMNALNLLLGAPIPEGLP---KPAVFGRDQVLAAIPVGLPSDLLERR 302 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTH-WSFGPKLYL 332 PDI E L + A IG A++ +P++S+ G A T G W F P+L Sbjct: 303 PDIMGAENSLLAANANIGAARAAFFPNISITGLFGFASTQLGGLFGSGQRFWQFAPQLQT 362 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G + N+ A++ +++++ A +EV +AL + + L+ Sbjct: 363 PIFG-GGVGGNLDLAKARNNIAVAQYEKSIQTAFREVADALAGEATYTRQLDALRALEAS 421 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD-------LYIA 445 ++++ L+ + Y G S L + + EVDL ++ ++ +D LY A Sbjct: 422 AQETLRLAKLRYETGIDSFLQVQN-------AEVDLYATQQSFLQTGMDSLLNRVELYKA 474 Query: 446 IGSGY 450 +G G+ Sbjct: 475 LGGGW 479 >gi|311107562|ref|YP_003980415.1| outer membrane protein OprM 4 [Achromobacter xylosoxidans A8] gi|310762251|gb|ADP17700.1| outer membrane protein OprM 4 [Achromobacter xylosoxidans A8] Length = 495 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 115/487 (23%), Positives = 220/487 (45%), Gaps = 50/487 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL----------------PTQFSIGNSKNLINID- 48 A+ + V LAGC++ P+Y +P P+ PT S ++ D Sbjct: 10 ALSAFVAVALAGCSLAPDYKRPDAPVTDAWPDQPKVQYGGYAKPTSLGTQPSTAVMPQDG 69 Query: 49 ----TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 L W E F D L L++++L N + A ER+ A+ R +PS A I Sbjct: 70 TPAANLGWREFFRDPRLQSLIELSLVNNRDLRVAVERVEEARAQYGIQRGAQWPSIGAGI 129 Query: 105 S--HRFIP-NLKTNSTGQLDSDWK---------IDLFGQRRHI-ESSLANLDSAYAQVDI 151 + +P N++ +G + S ++ IDLFG+ R++ E++ S Sbjct: 130 QGQRQHLPQNMRQPGSGSISSSYQAGIGLTTFEIDLFGRLRNLSEAAYQQYLSTEQAQKS 189 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++ ++ + SY + R + ++ + + L +++ +L +F G S+L L + + Sbjct: 190 AQITLVGAVAQSYFNLRAAEVQLELTQRTLASRQESYDLVKRRFDGGVASELDLNQAKTL 249 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + SD+ L ++ ++ + L+G T + + + L + G+P+DL Sbjct: 250 LDTASSDLAQLARAQAQAMNALVLLVG---TPLPPDLPAPAVFGRDQLLATVPAGLPSDL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 + RPDI E +L + A IG A++ +P++SL G + + + F G +WSF P Sbjct: 307 LERRPDIMAAENQLLSANANIGAARAAFFPTISLTGLLGVASPSLGDLFKGGQGYWSFSP 366 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + P+F G I+ + A++ +++++ A +EV +AL + + Sbjct: 367 SITTPLFAGGSIREGLNLAKARDNIAVAQYEQSIQQAFREVSDALAGEATYGAQLDAQRA 426 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK--SYVDLY 443 + +++ LS + Y G S L + TA+V+ LS+ + LA + V+LY Sbjct: 427 LQDASGRTLELSNLRYTNGIDSYLQV-----QTAQVDFFNAQLSLVQTGLAALINRVELY 481 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 482 KALGGGW 488 >gi|296391412|ref|ZP_06880887.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa PAb1] Length = 479 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 208/463 (44%), Gaps = 20/463 (4%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L C++ P Y +P P+ + + IDTL W D L +L Sbjct: 7 GVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL N ++ Q I AA+ RAD P A+ + R +L + ++ Sbjct: 67 VDMALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAL 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + + L + GA + L + + +E E++ R Sbjct: 187 RRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQERNLRQKQQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ ++ +S +P L I G P++LI RPDI E +L A Sbjct: 244 AFNALVLLLGSDDAAQAIPRSPGRRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS + F G + WSF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ T+ A +EV +AL + + ++ L+ +++ L+ Y G Sbjct: 364 ARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGV 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 424 DNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 466 >gi|307726132|ref|YP_003909345.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586657|gb|ADN60054.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 506 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 119/466 (25%), Positives = 218/466 (46%), Gaps = 38/466 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTSLNKLVK 66 V+LA C VGP+YT+ + P + S ++ D WW + D +L L Sbjct: 20 VMLAACAVGPDYTRAQAEVPPAWNTDSYWRVAAPSHAPMDPD---WWNVYQDATLAGLEV 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF------------IPNLK 113 AL QN T++ A AK + + RA P A+ + RF P + Sbjct: 77 QALAQNQTLVAADAHYQQAKATLANTRAQQVPEVDLAASAARFRISQDRPRTNYATPTVS 136 Query: 114 T-NSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T + QL ++ DLFG+ RR +E + A+ A + A+L + +++ Y R Sbjct: 137 TVQNNLQLGPTINYDTDLFGRIRRQVEGATASAGEAADDLANARLILTTEVATDYFALRE 196 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 I + +Q + L +K ++ + + GA S L +++ ++ + + L Sbjct: 197 LDTEIDVLNQSVTLQQKALDYVNAQHDLGAVSGLDVLQQKSLLDTTRVQAQLLLNQRAQF 256 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G PA +F + + +FQ +P I +G+P+DL++ RPDI E+ +A + Sbjct: 257 EHAIAALVGVPAPQFA--IAPKVLSFQ----VPAIALGVPSDLLQRRPDIASAERAMAAA 310 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+AK+ +PSL+L I A N W+ G +FD G+ +N++ Sbjct: 311 NAQIGVAKAAFFPSLTLTPGIGWEATQFANLLSAPTLMWTLGAAASQVLFDGGRRAANVQ 370 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + +++TVLNA ++V++ +T + + + AV ++ ++L+ Y Sbjct: 371 FASEGYKATQANYRQTVLNAFQQVQDGITGLAVLDGAAKQSEDAVADAQRLLALANDRYS 430 Query: 406 QGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGY 450 G + L+++ +++ + D I +Q+ S V L A+G G+ Sbjct: 431 GGLVAYLNVITAQQSLLNSKRQDAQIRGQQMTLS-VALVKALGGGW 475 >gi|170696241|ref|ZP_02887374.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170138885|gb|EDT07080.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 532 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 106/429 (24%), Positives = 205/429 (47%), Gaps = 39/429 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 +WW+ F D L+ L + A N + A R+ A+ + ++D FP Sbjct: 89 EWWKIFGDPQLDALEEQAAAANQDLKAAAARVQQARAVTRAAKSDWFPKFDAGFGPTRER 148 Query: 102 ASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 AS + +F P+ +TG Q+ + ++ DLFG+ ++ +S A+ + A +L+ Sbjct: 149 ASAASQFQPDSVGGTTGTIWRAQVGASYEADLFGRVGSNVNASRADEQQSEALFRSVQLS 208 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y R + + + L + ++L +F +G S+L + + E+ S Sbjct: 209 LQADVAQNYFQLRELDTDQDLYRRTVALREDTLKLVERRFKEGDISELDVSRARNELASA 268 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADL 271 +D + + + H+++ LLG P +F +F +P+ + G+P+ L Sbjct: 269 RADAVGVARQRAASEHSLAILLGKPPADF---------SFAEAPLVPVGVRVPPGLPSAL 319 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----F 326 + RPD+ E+ +A + A++G+AKS +P L + G A ++++ G WS Sbjct: 320 LERRPDVSAAERAMAAANARVGLAKSAFFPKLDITG--AFGYESATLGDLFMWSSRAFIL 377 Query: 327 GP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 GP L LP+FD G+ K+N+ +A + E +++ VL A +EVE+ L + Sbjct: 378 GPFAGTALTLPLFDGGRRKANLAQARAKYDEDVAQYRQQVLVAFREVEDNLADLRLLDDQ 437 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + +AV+ +++ LS Y +G S LD++D ER ++ S + A + V+L Sbjct: 438 MREQNNAVQASQRAARLSRTQYTEGAVSYLDVIDGERQVLSTQLQASHLQGTQAVATVNL 497 Query: 443 YIAIGSGYN 451 A+G G+ Sbjct: 498 IRALGGGWG 506 >gi|152981337|ref|YP_001351975.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] gi|151281414|gb|ABR89824.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] Length = 530 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/498 (22%), Positives = 213/498 (42%), Gaps = 74/498 (14%) Query: 17 GCTVGPEYTKPHMPLLPTQ---------------FSIGNSKNLINIDTLK--WWESFNDT 59 GC VGP+Y +P L P++ S GN++ + ++ WW+ F Sbjct: 20 GCAVGPDYKRPE--LTPSKAFSPTPLPTATTTAPVSGGNAQRFVLTQDIQADWWKLFRSP 77 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS 116 LN L++ A N TI A + A+EN+ + + FP+ Y + NL NS Sbjct: 78 QLNALIEKAFAANPTIESAQAALRVAQENVYAQQGFFFPTVSVGYTPARTKIAGNLGGNS 137 Query: 117 TG-----------------------------------QLDSDWKIDLFG-QRRHIESSLA 140 G QL + D+FG RR +E+ A Sbjct: 138 PGVQGNGTVISTVANPSAAEGGKAPFNAPVIYNFHTTQLTVGFTPDVFGANRRQVETLEA 197 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 Q++ A + + S + + I +E+ISI I+ +K++E+ +F G Sbjct: 198 QAKYQQLQLEAAYITLASNVTAAAIQEALLREQISIVQSIIASNEKSVEIVERQFKAGYA 257 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS--NNFQ-P 257 S+L L + + + +P L+K F + + L G MQ +F Sbjct: 258 SRLDLSLQQTTLLQAKEQLPPLQKQFEQTRNLLRALAGG--------MQDSDLPESFDLA 309 Query: 258 NLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALT 312 +L +P + + +P+ LI RPD+R E++L + A+IG+A ++ P S++G+ A Sbjct: 310 SLQLPEDLPLSLPSQLIDQRPDVRAAEEQLHAASAQIGVALANRLPQFSIDGTWGGAASK 369 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 F + + +P+ D G ++ R AE S ++ ++ETV+ A + V + Sbjct: 370 FSQMFWNSGRFFELAANISMPLLDGGVLRHRQRAAEESYKQAAAQYKETVITAFQNVADT 429 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L +I+ D + + + K +++L+ + +G + +++ E+ + ++++ A+ Sbjct: 430 LHAIHADAEALKASAELADTAKTTLTLTQKQHARGYIDRVVLINAEQGYRQAALNVAQAR 489 Query: 433 RQLAKSYVDLYIAIGSGY 450 L+ A+G G+ Sbjct: 490 AMRLGDTAALFQALGGGW 507 >gi|209543125|ref|YP_002275354.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209530802|gb|ACI50739.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 472 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 108/476 (22%), Positives = 217/476 (45%), Gaps = 37/476 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M + R + L +V ++GCTVGP Y PH P+Q+ + + WW F+D Sbjct: 1 MKMRRTVSVLALVAVSGCTVGPTYVPPHTDA-PSQWVVQPGTPSKPVPDEIWWAGFHDPQ 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L++L+ AL +N + A +R+ AA+E I R + SS N + + T Q Sbjct: 60 LSRLIHEALTRNNDLAAAEKRVEAAREQI---RIEAAASSPVIGLGGIAENRRQSQTIQW 116 Query: 120 ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D W++DLFG RR E++ A+ A+ D +L +++++ Sbjct: 117 PPRANAGDYRYWSLGFDGSWELDLFGMTRRRTEAARASAAEMQAERDGFRLRLLAEVGAD 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + R+ +A + L + +L ++T GA ++ + + EA++ + + +P L Sbjct: 177 YVTWCATEARVQVAEHRVSLAIRQRDLLTHEWTAGARARADVDQAEADLAAAQQIVPPLI 236 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG----IPADLIRNRPDIR 279 ++ + +L A E + + +L IP+ +P++++ RPDI+ Sbjct: 237 AQA-AHMKDALAILTATAPEAMQLTPRA------DLSIPMPPARPPSLPSEVLTRRPDIQ 289 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFD 336 + A A+IG+A + LYP +++ +T + T W G I+ Sbjct: 290 SATFRYARDNAEIGVAVASLYPKVAIPLDFGVTTSTLHQAFTTASLLWQLGVTAGETIYA 349 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ + I A ++ +++ VLNA+++VE+ L ++ + + ++ + + ++ Sbjct: 350 GGRRTAQIDAARLQRDAAWLGYRQAVLNALRDVEDRLATVADTESRLSSVNVELRAAQEK 409 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ-LAKSYVDLYIAIGSGYN 451 + + + G +L +L + ++ D + A RQ A + + LY A+G G+ Sbjct: 410 RAHAQRQFHAGETALSSVLVQDSMVDRIH-DQAFATRQETALASIALYKALGGGWR 464 >gi|124385469|ref|YP_001028406.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126449899|ref|YP_001079640.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|254360148|ref|ZP_04976418.1| outer membrane efflux protein OprB [Burkholderia mallei 2002721280] gi|124293489|gb|ABN02758.1| outer membrane efflux protein OprB [Burkholderia mallei NCTC 10229] gi|126242769|gb|ABO05862.1| outer membrane efflux protein OprB [Burkholderia mallei NCTC 10247] gi|148029388|gb|EDK87293.1| outer membrane efflux protein OprB [Burkholderia mallei 2002721280] Length = 514 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLCQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--ADLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASTTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|188990877|ref|YP_001902887.1| outer membrane protein of an RND superfamily export system [Xanthomonas campestris pv. campestris str. B100] gi|167732637|emb|CAP50831.1| outer membrane protein of an RND superfamily export system [Xanthomonas campestris pv. campestris] Length = 497 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/480 (23%), Positives = 212/480 (44%), Gaps = 31/480 (6%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----------I 47 M +R + V +L+GCT+ P Y +P P+ P QF+ + + I Sbjct: 1 MTPIRMTLAALAVTSVLSGCTLMPRYARPDAPV-PAQFAGATAAATVASEAAASAETPVI 59 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---- 103 + W E F D +L +++++AL N + A I A+ RA L P A+ Sbjct: 60 ADIGWREVFTDPALQQVIQLALDNNRDLRVAALNIEVARAQYRVERAALVPGVDATGTAN 119 Query: 104 ----ISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKL 154 S +P +T S S +++DLFG+ R + E +L S + Sbjct: 120 NARTPSELAVPGQPPVFRTYSANVGVSAYELDLFGRVRSLKEQALQQFLSTAEARRSTHI 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++++ + +Y+ +E + +A L + L F G S+L+L + + ++S Sbjct: 180 SLVADVASAYLTLAADQELLQLAQSTLTSQSDSYRLQQRSFELGVASQLTLRQAQTTVES 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 D+ + + + L+G E L + + N+ + G+P+ L++ Sbjct: 240 ARVDVERYTAQVAQDRNALVLLVGTQLPESLLPRALPDGASVEGNVLAAVPAGVPSQLLQ 299 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKL 330 RPDI E+ L + A IG A++ +PS+SL ++ + + F WSF P+L Sbjct: 300 RRPDILEAERNLRAANANIGAARAAFFPSISLTATLGSSSSSLSGLFESGTRAWSFVPQL 359 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP+F+ G+ ++N+ A+++ + +++++ A +EV +AL + + + Q V Sbjct: 360 TLPLFNAGRNRANLDMAKANRDIEVARYEKSIQTAFREVSDALAQRDTLGRQLQAQQALV 419 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S LS + +G S L LD +R+ + L + + V Y A+G G+ Sbjct: 420 DATADSYRLSQARFERGIDSYLQALDAQRSLYGAQQTLITTQLSRITNLVTFYKAMGGGW 479 >gi|255035942|ref|YP_003086563.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254948698|gb|ACT93398.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 482 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 109/472 (23%), Positives = 226/472 (47%), Gaps = 39/472 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + L + LLA C V +Y +P + L PT++ + I + + E F DT+L +L++ Sbjct: 21 VLILLVTLLASCKVSKDYQRPELAL-PTEYRNVPYGDTATIADMGFKEFFPDTTLQRLIE 79 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP-----------------------SSYAS 103 + N + A +RI+ A++ + R P SS+ Sbjct: 80 RGIAYNYDLQIALKRIDIAQQQVKQARMLQLPRVDLRIAGTYNRPSSNSLNGISASSFLK 139 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 SH I N T+ +D W+ D++G+ RR +++L + +++ + Sbjct: 140 SSH--IENYITS----VDLSWEADIWGKIRRQQQATLGQYLQTVEATKAVQTRLVADIAR 193 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + +++ +A L+L ++L++L G + LS+ + EA+ ++I IP L Sbjct: 194 GFFNLLMLDKQLEVAKHNLELSNNTLKLTNLLKDAGEATSLSVQQAEAQREAIALLIPQL 253 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E+ + + + L G ++ +FQ N + G+PA L+ RPD+R E Sbjct: 254 EQDITIQENALQILTGQMPNAVDRKVKLA--DFQAN--DSLATGVPAALVSRRPDVRAAE 309 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKG 338 + + A++G+A++ +YPSL ++ S + S +N S FG + PIF + Sbjct: 310 MSVLIANAELGVAQASMYPSLIISASGGIESFKSSNWFNIPGSLFGIAAGTIARPIFARR 369 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++K+N+ A+ ++ + ++++VLNA+ EV N+L + K+ + V + ++++S Sbjct: 370 QLKTNLEVAKIGREQSVLEFRQSVLNAVGEVSNSLVQTQKLKEQEAIANNQVNILQQAIS 429 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + Y+ + L+++ + + E++L+ + Q + VDLY ++G G+ Sbjct: 430 NAQLLYQSDMANYLEVITAQGNALQAELNLAFIRSQSLVARVDLYRSLGGGW 481 >gi|186474678|ref|YP_001863649.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184198637|gb|ACC76599.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 532 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 118/486 (24%), Positives = 215/486 (44%), Gaps = 65/486 (13%) Query: 12 IVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDTL--KWWESF 56 LL+GC VGP+Y P P LP Q + G + + + +WW F Sbjct: 41 FCLLSGCAVGPDYRTPPPPATETYTPTPLPDQTASSPGASGVPQQFVARQDIPAQWWTLF 100 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------- 105 + L+ L++ AL + + A + A EN+ RA + + Y S+ Sbjct: 101 HCEPLDALIREALANSPNVAAAQAALRQAGENL---RAQMGTTLYPSVDAKANATREKFN 157 Query: 106 ---------HRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 HR + NL S ++ + +D+FG RR +ES + +D Q+ A L Sbjct: 158 GVTFGQPGLHRIL-NLYNAS---VNVSYNLDVFGGARRELESLRSQVDYEGFQLQAAYLA 213 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + +E+I +I + + +F G ++ +++ E + Sbjct: 214 LSANIVTAAAKEASLREQIEATERIATDEDAQLGVLRKQFELGGVNRTAVLSQETLVAQT 273 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPAT-----EFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +P L +S H ++ L G P + EF M F +P+++ P+ Sbjct: 274 RATLPPLRQSLDQTRHQLAVLAGKPPSDTGVPEFRLSM------FTLPQSLPVSV--PSS 325 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI + L + A++G+A +++YP L+L+ G ALT + WS G Sbjct: 326 LVRQRPDILAADATLHQASAQVGVATANMYPQLTLSAGYGPQALTPAGLLKYADMIWSIG 385 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + PIF G++ + R A+++ + +++TVL A + V + L ++ D + Sbjct: 386 AGVTQPIFRGGQLSAQKRAADAAFDQANAQYRQTVLLAFQNVADTLRALEHDATGLRAQT 445 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYI 444 A + S+ L+ +R G S L +LD +R + V+L+ A+ A Y D L+ Sbjct: 446 EAWRAARDSLDLTRGQFRIGGVSYLALLDAQRQYQQTVVNLAQAQ---AARYADTAALFQ 502 Query: 445 AIGSGY 450 A+G G+ Sbjct: 503 ALGGGW 508 >gi|238028826|ref|YP_002913057.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237878020|gb|ACR30353.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 507 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/444 (25%), Positives = 205/444 (46%), Gaps = 37/444 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 + LL C+ P Y P L P F G + D + WW +F D L++L Sbjct: 13 VTLLCACSFAPTYRVPATAL-PAAFKEAGGWQRARPADRIARDGWWRAFRDPVLDRLEAQ 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRFI----PNLKT 114 + N + A R + A + RA LFP S+ AS + P++ Sbjct: 72 VARANPDVAAAVARHDEADALLDQARAGLFPTLGLDTQVSSNRASATRPLRGATQPDVYG 131 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKE 172 +T + D+ +DL+G+ R+ E + D+ + D+A +L++ + L +Y R + Sbjct: 132 ANTLEAGFDYDLDLWGKLRN-EVAAGRADAEASADDLASVRLSLQASLARAYFRLRGLDQ 190 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + +D Y++ ++L+ + G S L + + + + + + ++ + H Sbjct: 191 QQRMLADTIDTYRRALQLTLSRHAGGIASDLDVSRAQTRLDAARAAAEDVKARRALYEHA 250 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++TL G PA+ F + P+ I GIPA L++ RPD+ E+++A + A+I Sbjct: 251 VATLTGVPASSFSLPASPGAARL-PS----IPAGIPAALLQRRPDVAAAERRVAAANARI 305 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G+A++ +P L+L +A + +S G N WS GP L L +FD G+ ++ A Sbjct: 306 GVARAAFFPDLTLG--LAGGYQSSGLGRWLSAPNEIWSIGPSLMLTLFDGGRRQAISDEA 363 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + E ++ VL A ++VE+AL + + Q A++ ++++ LS YR G Sbjct: 364 RARLAENGARYRSVVLRACQQVEDALALTHHLGDEARREQEALDAAERTLRLSSSRYRDG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIA 431 S LD++ + E+D IA Sbjct: 424 VVSYLDVVTAQ----ATELDTRIA 443 >gi|254249795|ref|ZP_04943115.1| Outer membrane efflux protein [Burkholderia cenocepacia PC184] gi|124876296|gb|EAY66286.1| Outer membrane efflux protein [Burkholderia cenocepacia PC184] Length = 520 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 110/427 (25%), Positives = 206/427 (48%), Gaps = 35/427 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-------- 102 +WW+ F D L+ L AL N + A R+ A+ S R+ FP A Sbjct: 82 EWWKVFGDPVLDSLETQALAANQNLKAAAARVEEARAATRSARSQWFPQVGAGFGPTREG 141 Query: 103 -SISHRFIPNLK--TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 S + +F P TN+T Q ++ DLFG+ R++E+S A+ + A +L Sbjct: 142 LSSASQFQPQGTGPTNATLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLA 201 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y + R + + ++L ++ ++L +F +G S+L + + + E+ S Sbjct: 202 LQADVAQNYFELRQLDSDQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELASA 261 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADL 271 ++D + + + H ++ LLG +F F+ +P+ + G+P+ L Sbjct: 262 QADAVGVARRRAASEHALAILLGKAPADFA---------FKETPIVPVAVKIPPGLPSAL 312 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 + RPD+ E+ +A + A+IG+AKS +P L + GS A T N F + + GP Sbjct: 313 LERRPDVSAAERAMAAANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGP 372 Query: 329 ----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LP+FD G+ + +++A + EQ +++ VL A +EVE+ L + + Sbjct: 373 FAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIR 432 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + AV +++ +LS Y++G + LD++D ER+ + ++ + A S V+L Sbjct: 433 AQEAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIR 492 Query: 445 AIGSGYN 451 A+G G+ Sbjct: 493 ALGGGWG 499 >gi|300692821|ref|YP_003753816.1| outer membrane efflux protein [Ralstonia solanacearum PSI07] gi|299079881|emb|CBJ52559.1| putative outer membrane efflux protein [Ralstonia solanacearum PSI07] Length = 480 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 197/440 (44%), Gaps = 38/440 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLP-------------TQFSIGNSKNLINIDT-LKWWESFND 58 V L GC VGP++ P P P G +++L + WW F Sbjct: 15 VALGGCAVGPDFRSPAPPAAPGYTAQPLPATTASAPVPGGEAQHLADASVPADWWHLFQS 74 Query: 59 TSLNKLVKIALQQNLTIL-----------QATERINAAKENI----LSVRADLFPSSYAS 103 +L+ LV AL+ + T+ +A + A ++ +VR + P ++ Sbjct: 75 PALDALVDEALRASPTVAQAAARLRQAQAEADAQFGAVLPSVDGTASAVRQQVNPEAFGF 134 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + + P T + L + +DLFG RR +E+S A +D+ +++ A+L++ ++ Sbjct: 135 STPK--PGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDTQRYELEAARLSLAGNVVT 192 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + +I ++L + + ++ +F G +++ ++ + E+ +P L Sbjct: 193 AVVRVASLDAQIDTTQRLLAAQRDQLVITERRFGAGGVARVDVLSQRILVAQTEATLPPL 252 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 253 ALQAAQARHRLSVLLGREPGAALPDLPPLDALRLPD---PLPVSLPSTLAQRRPDIRAAE 309 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++ A +G+A ++L+P ++L+ GS N F ++ W+ G L P+F G Sbjct: 310 AMWREASANVGVATANLFPRITLSAELGSETTRFRNLFGAGSSIWNLGGSLTQPLFHGGT 369 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ R AE++ +++ VL ++EV +AL +++ D + + A + +++ Sbjct: 370 LRARKREAEAAYDAAGAAYRQAVLQGLQEVADALHAVHNDARTLQARALATDQATQTLRA 429 Query: 400 SMINYRQGRYSLLDILDIER 419 + Y G S L +LD +R Sbjct: 430 AQARYAAGGISTLALLDAQR 449 >gi|27526400|emb|CAD48863.1| EefC outer membrane protein [Enterobacter aerogenes] Length = 454 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 120/461 (26%), Positives = 218/461 (47%), Gaps = 36/461 (7%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +FI LL AGC ++ P Y +P P+ LP G S ++ W + ND L K+ Sbjct: 7 MFIALLTAGCVSLDPHYERPAAPVPATLPGAH--GESTAVVG----DWQKVVNDARLKKV 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NSTGQLD- 121 V IAL N + +A I AA+ RA LFP+ A +SH + + +ST Q D Sbjct: 61 VSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTIASGLSSTSQADG 120 Query: 122 --SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ + + ES LA+ +A +L +I+ L +++ + Sbjct: 121 AVSSFELDLFGKNQSLSRAARESWLASEFTAQN----TRLTMIADLTTAWVTLATDNSNL 176 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A Q +D + + ++ + G S L E+ + + + + + + I+ Sbjct: 177 ALAQQTMDSAENSRKIVARQMAVGTASAGDLSSAESVYQQARASVASYRTLVAQDKNAIN 236 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G E L + + N + G+ + ++ RPDI+ E L + A IG Sbjct: 237 LLAGETVPESL--LPGTLESLGDNSITLVPAGVSSSVLLRRPDIQEAEHNLKSANADIGA 294 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESS 350 A+++ +PS+SL S + D S +H WSF P + LP+F G + +R A++ Sbjct: 295 ARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYAQAE 353 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + T+++++ +A K+V +AL + + Q V +KS+ ++M +Y+ G Sbjct: 354 KKGLIATYEKSIQSAFKDVADALARRETLSEQLDAQQQYVAAEQKSLDIAMKSYQAGVGD 413 Query: 411 LLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 414 YLSVLTAQRTLWSAKATL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|238024427|ref|YP_002908659.1| type I secretion outer membrane protein [Burkholderia glumae BGR1] gi|237879092|gb|ACR31424.1| Type I secretion outer membrane protein [Burkholderia glumae BGR1] Length = 487 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 104/477 (21%), Positives = 216/477 (45%), Gaps = 47/477 (9%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 +RA+ L ++ ++ C++ P KP P+ T + + L W F D L + Sbjct: 1 MRALMVLLLLTVSACSLDPALVKPEPPVPATFPTEAGRATQAHAADLGWRTMFRDPRLQR 60 Query: 64 LVKIALQQN----LTIL-----------QATERINAAKENILSVR------ADLFPSSYA 102 L+++ L N L +L Q R+ + + + R ++L P+ A Sbjct: 61 LIELGLGHNRDLRLAVLNVEAVRAQYGIQRAARLPSIEATASATRQRTVAGSELGPAVPA 120 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 ++ +++ +L N+ +++DLFG+ R + E++ A ++ ++ ++ + Sbjct: 121 AVQEQYVLSLGLNA-------FEVDLFGRVRSLSEAAFARYLASEQGRRATQIALVGAIA 173 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y R + + +A + L ++++++L+ +S L + + EA++ S ++D+ Sbjct: 174 DAYFAERLAQAQHRLAERTLADWRQSLDLARKLKAANQSSGLDVAQAEAQVASAQADLEA 233 Query: 222 LEKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + + + L+G PA+ L + QP + + G+P+DL+ R Sbjct: 234 RGRAVAQSRNALRLLIGTDLPANLPASIPL--------DAQP-VVTRLPAGLPSDLLLRR 284 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYL 332 PDI E+ L + A+IG A++ +P LSL ++ F G + WSF P++ + Sbjct: 285 PDILQAEQSLVAANAEIGAARAAFFPRLSLTAALGYASPAMHGLFDGGSRAWSFAPQITV 344 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G++++ +R A+ +++ + A +EV + L + + V Sbjct: 345 PIFQAGRLRAELRLAQLRKSSAVAEYEKAIQAAFREVADGLAGQETYGRQIEAQARVVSS 404 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ M LS + Y G L++LD +R L +R + V LY A+G G Sbjct: 405 AERRMELSKLRYLAGVEGRLELLDSQRQLYAARQALLELRRSALGNAVSLYKALGGG 461 >gi|294023680|ref|YP_003546999.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292677460|dbj|BAI98976.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 351 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 14/351 (3%) Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSY 164 H F N S G + +++D +G+ R++ + + A Q + A +L +I + +Y Sbjct: 5 HDFC-NRARYSIGVGVTGFELDFWGRVRNLSDAARSQYLATVQAERAFRLALIRDVASTY 63 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 +R ERI++A + ++ + ++ + G TS L + E+ + E+++ +L Sbjct: 64 FASREADERIALAEATVRSRQEGLRIAERRLEAGVTSALDFRQAESLLTQAETELASLRL 123 Query: 225 SFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + + ++ LLG P L + Q N I G+P++L+ RPDI Sbjct: 124 AEAQSENFLAVLLGGPVPVGLTVPLTLADQKNG------TVIAAGLPSELMVTRPDILAA 177 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E+KL + A IG A++ +PS+SL GSI N WSFGP + LPIFD G Sbjct: 178 EEKLRAARANIGAARAAFFPSISLTGSIGFASTDLGNLIGNEGLSWSFGPSISLPIFDWG 237 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K N+ AE+ ++ T+ A +EV +AL + V A + Sbjct: 238 ARKGNLSVAEAREDIAIAEYERTIQGAFREVADALAGRRWLAEQVAAQVRATAAQRAIAD 297 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ YR+G + L++LD ER E L +R + V LY+A+G G Sbjct: 298 LARTRYREGVANYLEVLDAERNLFIAEQTLIQLRRAELDALVSLYVALGGG 348 >gi|15599793|ref|NP_253287.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa PAO1] gi|218893694|ref|YP_002442563.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa LESB58] gi|12230972|sp|Q51397|OPRJ_PSEAE RecName: Full=Outer membrane protein oprJ; Flags: Precursor gi|9950846|gb|AAG07985.1|AE004873_7 Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa PAO1] gi|218773922|emb|CAW29736.1| Multidrug efflux outer membrane protein OprJ precursor [Pseudomonas aeruginosa LESB58] Length = 479 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 208/463 (44%), Gaps = 20/463 (4%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L C++ P Y +P P+ + + IDTL W D L +L Sbjct: 7 GVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL N ++ Q I AA+ RAD P A+ + R +L + ++ Sbjct: 67 VDMALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAL 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + + L + GA + L + + +E E++ R Sbjct: 187 RRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQERNLRQKQQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ ++ +S +P L I G P++LI RPDI E +L A Sbjct: 244 AFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS + F G + WSF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ T+ A +EV +AL + + ++ L+ +++ L+ Y G Sbjct: 364 ARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGV 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 424 DNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 466 >gi|33601508|ref|NP_889068.1| outer membrane lipoprotein [Bordetella bronchiseptica RB50] gi|33575944|emb|CAE33023.1| probable outer membrane lipoprotein [Bordetella bronchiseptica RB50] Length = 488 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 113/478 (23%), Positives = 223/478 (46%), Gaps = 33/478 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPL---LPT----QFSIGNSKNLINIDTLKWWE 54 ++R + SL + LAGC++ P Y +P P+ P+ + + W + Sbjct: 5 VMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRD 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIP 110 F D L +L+ ++L N + A + AA+ RADL PS S+ R Sbjct: 65 FFGDPLLQELLALSLANNRDLRVAALNVEAARAQYRIQRADLAPSVGVGGTGSV-QRTPA 123 Query: 111 NLKTNSTGQLD-----------SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVIS 158 +L N +GQ S W++DLFG+ R + L A + +A +L +++ Sbjct: 124 DL--NPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVA 181 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+ R +E +++ Q L +++ +L+ + G ++L L + E +++ E + Sbjct: 182 ETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERN 241 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPD 277 + + + + + L+G P + Q+ + + + G+P+DL+ RPD Sbjct: 242 LSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPD 301 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLP 333 IR E +L + A IG A++ +P +SL GS A T S G + WSF P++ +P Sbjct: 302 IRAAEHQLQAANASIGAARAAFFPRISLTGS-AGTASASLGGLFDAGSGAWSFAPQISVP 360 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G +++++ A+ +++ + + +EV +AL ++ + + V+ + Sbjct: 361 IFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQAN 420 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ LS Y+QG + L +LD +R+ + L + + + LY A+G G++ Sbjct: 421 QRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWS 478 >gi|259908841|ref|YP_002649197.1| Type I secretion outer membrane protein [Erwinia pyrifoliae Ep1/96] gi|224964463|emb|CAX55972.1| Type I secretion outer membrane protein [Erwinia pyrifoliae Ep1/96] gi|283478826|emb|CAY74742.1| putative HAE1 family transporter [Erwinia pyrifoliae DSM 12163] Length = 459 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 218/461 (47%), Gaps = 33/461 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +V L GC E +P+ PTQ+ +G + WW +FND LN+LV+ A Sbjct: 13 LVVALTGCATHLERAPSSLPI-PTQWRHQVGPGAAV----EAGWWRAFNDPVLNQLVEQA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFI------PNLKTNSTGQ 119 L+ N IL A R++ + + D FP+ A ++ R I P + G Sbjct: 68 LRHNPDILIARSRVDQYRAQLRGAEGDNFPTLDAGMAGSRARAISAVTGQPYQYSVFQGL 127 Query: 120 LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L +++ +DL+G+R I+++ A L + A A L + S + Y+ E++ + Sbjct: 128 LQANYNVDLWGERSSSIDAAKATLAAQQAAAAAAGLTIASSVASGYMTLASLDEQLRVTE 187 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L +++L+ +F G TS+L ++ ++E ++ ++ IP L+ + +S L+G Sbjct: 188 ATLASRNNSLKLAQRQFETGYTSRLEWLQSQSEYQTAKAQIPLLQHQIAEQENALSILVG 247 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + + N+F+ + +P+ L++ RPDI E++L + A + A++ Sbjct: 248 MNPRQI-----ARQNHFEHLAVQTMPAEMPSRLLQRRPDIVQAERQLLAADASLHSARAS 302 Query: 299 LYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 L PSL+L S L DN F WS G + P+ ++ + + + + ++ Sbjct: 303 LLPSLNLTASGTLQSSVLHQLVDNPF----RLWSVGGSILAPLLNREALTAQVDVSMATR 358 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +++ V A EV N L +I ++ +LQ ++ ++++ ++ Y+ G S Sbjct: 359 NQALYNYEKVVRAAFSEVNNDLDAITRYQQQQAELQIQQQVAQEALRIARNRYQNGYASY 418 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 LD LD +R ++ + AK L + +DLY A+G G+ P Sbjct: 419 LDELDAQRTLFTTQLSVVQAKNNLLLAQIDLYRALGGGWQP 459 >gi|20502696|gb|AAM22559.1| unknown [Aeromonas hydrophila] Length = 475 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 225/470 (47%), Gaps = 31/470 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N+ + + +L + +LL GC++ P+Y +P +P Q + S W + F D + Sbjct: 6 NMTKTLITLSVTLLLGGCSMAPDYQRPELP----QGATWQSNQTGEAAVSSWRQQFLDPA 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNST 117 L +L+ AL+ N + A + A + RA P+ A+ S + +L + Sbjct: 62 LQQLIATALENNRDLRIAALNVEAYEARYRIQRAAQLPTLAANGSGSRQQGSDDLSSTGQ 121 Query: 118 GQLDSDW---------KIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYI 165 G + S + ++DLFG+ + ++ L++ AQ++ + + +++ + +Y+ Sbjct: 122 GTISSQYGANIGITAYELDLFGRIQSLKDQ--ALETYLAQIETQRSTQIALVASVANAYL 179 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E ++++ L +++ L+ K+ GA S++ L + ++S + + ++ Sbjct: 180 TLLADQELLALSEATLATEQESYGLTEHKYRLGAASEMELAQGRTALESAKVSLAQYQRQ 239 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + ++ LLG T M + + + L I +G P+ L++ RPDI E L Sbjct: 240 VKQDRNGLALLLG---TGVPALMTEPATLAEVQL-AAIPVGAPSSLLQQRPDILAAEHSL 295 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG A++ +P++SL + A T N F G W+F P++ LPIFD GK Sbjct: 296 KAANANIGAARAAFFPTISLT-ATAGTASNQLSGLFDGGTGTWTFMPQINLPIFDGGKRI 354 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ AE S ++ ++++++ A KEV + L + + ++ + Q V+ + L+ Sbjct: 355 ADLDVAEVSTKQAVASYEKSIQTAFKEVADTLGAQADYQQQLQAQQELVKASQTYFKLAE 414 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y +G S L LD +R+ + L + + V LY A+G G+ Sbjct: 415 VRYEKGVDSYLTRLDAQRSLFSAKQGLITTRLAQLSNQVALYKAVGGGWQ 464 >gi|167826874|ref|ZP_02458345.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 9] Length = 510 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 212/470 (45%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW +F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRAFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|315638627|ref|ZP_07893801.1| RND efflux system, outer membrane protein CmeC [Campylobacter upsaliensis JV21] gi|315481251|gb|EFU71881.1| RND efflux system, outer membrane protein CmeC [Campylobacter upsaliensis JV21] Length = 478 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 31/463 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 IF L LL C++ KP + + F+ +S ++I+ WW+ FND++LN LV+ Sbjct: 5 IFILTAFLLGACSL-----KPSLKVGEANFTSMDSN--VSIEK-NWWKDFNDSNLNLLVE 56 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---NLKTNSTGQ---- 119 AL+ N + A + A + R+DL P AS + N N TG Sbjct: 57 KALKNNADLKIAYVNLEQAAAQLGIDRSDLLPKLDASANANRAKSSINAPNNKTGAFSYN 116 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L+ +++DL+G+ R + +S NL ++ A+L++IS ++ Y ++ + E Sbjct: 117 NSFDMGLNLSYEVDLWGKYRDNYNASYENLKASEFDYVAARLSIISNVVQMYFNSANAYE 176 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I + ++ Y + EL + GA + L + +AE++S+++ + + Sbjct: 177 AMQIYKETMEAYTQTYELKRSLYEIGAIGEYELAQSKAELESVKAQYINAIDTKENYLKA 236 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + L + L+ + N+Q + ++ GI + ++ RPDI +L Sbjct: 237 LKILTASDLDDVLY----KEENYQKFTHFAKSLPEGISSTILLQRPDINAALSRLTQQNY 292 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A+S PSLSL G + D + WS G K +PIF G+I ++ A Sbjct: 293 LVGVARSAFLPSLSLTGLLGFESGDLDTLVKDGSKAWSVGGKFLMPIFHWGEIYQSVNLA 352 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + S + +IT++ T+ A EV AL+ + + +E +K +L+ I Y G Sbjct: 353 KLSKDKAFITYENTLKTAFAEVRYALSQRKTSLQNYENYKALLEAQEKIYTLASIRYENG 412 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++ LD R ++ + A +A S VD+ A G G+ Sbjct: 413 SIPLIEYLDARRNLLSAKISYANATYLMANSIVDVIKAFGGGF 455 >gi|170701555|ref|ZP_02892505.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170133549|gb|EDT01927.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 471 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 115/468 (24%), Positives = 206/468 (44%), Gaps = 41/468 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 + LLAGC+ P Y P +P+ P F G + D L WW + D +L++L + Sbjct: 13 VALLAGCSFAPSYHAPAVPV-PAAFRETGPWVDAAPADRLPRDGWWRVYGDATLDRLEPL 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKT 114 + N + A R + A A L P S+ + P++ Sbjct: 72 VARANPDLAAAVARHDEAAALFDEAHAALLPTLGIGAETDRDRQSARRPLRGSGQPDVYE 131 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFK 171 ++T + IDL+G+ R+ + A D+A A D +L++ +++ +Y D Sbjct: 132 SNTLDAGLGYDIDLWGKVRNTVA--AGRDNAQAAADDLASVRLSLQARVASTYFDLAGLD 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 Q +D Y++ +L+ + G S L + + + ++ ++ + ++ H Sbjct: 190 READSLAQTIDAYRRAWQLTVSRHRGGLASGLDVSRAQTQLALAQARASDIAARRALDEH 249 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G A+ F +P I G+ + L+ RPDI E+++A + A Sbjct: 250 AIAVLVGVSASTF------SLPAAAALPAVPSIPTGLASTLLERRPDIAAAERRVAAANA 303 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A++ +P LSL D P N WS GP+L +FD G + +R A Sbjct: 304 RIGVARAAYFPDLSLGLDAGFQSDTFSPWLAAPNEIWSIGPRLATTLFDGGLRAAGVRHA 363 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + EQ ++ VL A +EVE+ L ++ + A+ ++S++L+M YR G Sbjct: 364 RAQFAEQGARYRSVVLAAFREVEDDLALLHRLGDESAQDDAALVAARQSLALAMSRYRDG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIAK----RQLAKSYVDLYIAIGSGYN 451 S LD++ + E+D IA +L ++ V L A+G G+ Sbjct: 424 AVSYLDVVTAQ----TTELDTQIASLDVDARLLQASVALVRALGGGWR 467 >gi|222054326|ref|YP_002536688.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. FRC-32] gi|221563615|gb|ACM19587.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. FRC-32] Length = 476 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 211/467 (45%), Gaps = 37/467 (7%) Query: 12 IVLLAGC--TVGPEYTKPHMPLL---------PTQFSIGNSKNLINIDTLKWWESFNDTS 60 ++ L+GC T+ PEY++P P+ T+ + K L I W E F D Sbjct: 15 LLWLSGCATTMAPEYSQPAAPVTNAWPSGPAYKTEAAKPEQKPLAEI---PWQEFFVDPQ 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLK 113 L KL+ +AL N + + + + RADLFP ++Y I F + Sbjct: 72 LQKLIALALDNNRDLRVSILNMERFRAQYQIRRADLFPNVDATAGATYQRIPEDFSATGR 131 Query: 114 TNSTGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + Q D S +++DLFG+ R + + +L S +++++S++ +Y+ Sbjct: 132 ATTVHQYDVGLGVSSYEVDLFGRVRSLKDQALEQYLSTEQARRSVQISLVSQVATAYLTL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ER+ +A L +++ +L+ +F G +S L L + + + + DI Sbjct: 192 ASDLERLKLAKDTLANQQESFKLTKSRFDSGVSSALDLQQAQTSVDAARVDIARFTALTA 251 Query: 228 MNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ ++G PA E L QS + + G+P+D++ RPDI E L Sbjct: 252 QDANGLNLVVGASVPA-ELL----PQSLSETLTALKDVAPGLPSDVLLYRPDILQAEFLL 306 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P ++L ++ D F G W F P++ +PIF+ G+ ++ Sbjct: 307 KGANANIGAARAAFFPRITLTSNVGFGSDELGGLFKGGAFTWGFTPRISVPIFEGGRNRA 366 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N++ AE +++ + A +EV +AL + V Q + +S LS Sbjct: 367 NLKVAEVDRDIAVAQYEKAIQVAFREVADALAQRGTIDEQVAAQQSLTDATAESFRLSEA 426 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G S L++LD +R+ + +L A+ + V LY +G G Sbjct: 427 RYERGVDSYLNVLDSQRSLYAAQQNLISARLIRLNNLVSLYKVLGGG 473 >gi|225423382|gb|ACN91206.1| CmeC [Campylobacter upsaliensis] Length = 478 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 31/463 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 IF L LL C++ KP + + F+ +S ++I+ WW+ FND++LN LV+ Sbjct: 5 IFILTAFLLGACSL-----KPSLKVGEANFTSMDSN--VSIEK-NWWKDFNDSNLNLLVE 56 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---NLKTNSTGQ---- 119 AL+ N + A + A + R+DL P AS + N N TG Sbjct: 57 KALKNNADLKIAYVNLKQAAAQLGIDRSDLLPKLDASANANRAKSSINAPNNKTGAFSYN 116 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L+ +++DL+G+ R + +S NL ++ A+L++IS ++ Y ++ + E Sbjct: 117 NSFDMGLNLSYEVDLWGKYRDNYNASYENLKASEFDYVAARLSIISNVVQMYFNSANAYE 176 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I + ++ Y + EL + GA + L + +AE++S+++ + + Sbjct: 177 AMQIYKETMEAYTQTYELKRSLYEIGAIGEYELAQSKAELESVKAQYINAIDTKENYLKA 236 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 + L + L+ + N+Q + ++ GI + ++ RPDI +L Sbjct: 237 LKILTASDLDDVLY----KEENYQKFTHFAKSLPEGISSTILLQRPDINAALSRLTQQNY 292 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A+S PSLSL G + D + WS G K +PIF G+I ++ A Sbjct: 293 LVGVARSAFLPSLSLTGLLGFESGDLDTLVKDGSKAWSVGGKFLMPIFHWGEIYQSVNLA 352 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + S + +IT++ T+ A EV AL+ + + +E +K +L+ I Y G Sbjct: 353 KLSKDKAFITYENTLKTAFAEVRYALSQRKTSLQNYENYKALLEAQEKIYTLASIRYENG 412 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++ LD R ++ + A +A S VD+ A G G+ Sbjct: 413 SIPLIEYLDARRNLLSAKISYANATYLMANSIVDVIKAFGGGF 455 >gi|300776209|ref|ZP_07086068.1| FusA/NodT family multidrug resistance protein [Chryseobacterium gleum ATCC 35910] gi|300505342|gb|EFK36481.1| FusA/NodT family multidrug resistance protein [Chryseobacterium gleum ATCC 35910] Length = 470 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 112/459 (24%), Positives = 223/459 (48%), Gaps = 35/459 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C YT+P +PL P +F + + +I L+W + F+D L +L++ ++ N + Sbjct: 20 CVSKLAYTEPDLPL-PEKFQYTATADTASIANLEWKQFFSDPILQELIEKGIKNNYDLQI 78 Query: 78 ATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----------------L 120 A +++ A++E + + +P +S + K + GQ Sbjct: 79 ALKQVAASQEKLKQAKYMQYPDVGFGVSGQISRPSKNSMNGQSLNLFLGSSHVEDYNAAF 138 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W+ D++G+ + E S Y + V++ + Y + ++++IA Sbjct: 139 NLSWEADIWGKIKNQQEVSRMQYLQTYEGSKAVQTQVVAAIAQGYYNLLMLDKQLAIAKS 198 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L+L + ++ + G + L + + A+ ++ E I LE++ + + +S L+G Sbjct: 199 NLELTSNTLLMTQKMWESGDNTSLGVQQAAAQKQATELLIAQLEQNIAIQENALSILVGE 258 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + ++ + N I+ G+PA ++ RPD+R QE L +S A +GIA++++ Sbjct: 259 LPNKVNRTLEMSDTSLPQN----ISAGLPAAMVSRRPDVRQQELVLLESNAMVGIAQANM 314 Query: 300 YPSLSL--NGSI-ALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP+L + NG + + DN F P + S + PIF K ++K+N+ A+ ++ Sbjct: 315 YPALKITANGGVNSFKFDNWFQIPA-SLFGSVLGGITQPIFQKRQLKTNLEVAKIQREKN 373 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH---KKSMSLSMINYRQGRYSL 411 + ++++VLNA+ EV +AL S NE+ K+ + Q A E K + + + Y+ G + Sbjct: 374 VLAFRQSVLNAVGEVADALVS-NENLKV--QEQKATEQATTLKDGIKSAQLLYKGGSANY 430 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+++ + + E++L+ KRQ S VDLY A+G G+ Sbjct: 431 LEVITAQGNFLQAELNLASIKRQRLSSIVDLYRALGGGW 469 >gi|28900217|ref|NP_799872.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|260361658|ref|ZP_05774685.1| outer membrane efflux protein [Vibrio parahaemolyticus K5030] gi|260880779|ref|ZP_05893134.1| outer membrane efflux protein [Vibrio parahaemolyticus AN-5034] gi|260896511|ref|ZP_05905007.1| outer membrane efflux protein [Vibrio parahaemolyticus Peru-466] gi|28808528|dbj|BAC61705.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089231|gb|EFO38926.1| outer membrane efflux protein [Vibrio parahaemolyticus Peru-466] gi|308091776|gb|EFO41471.1| outer membrane efflux protein [Vibrio parahaemolyticus AN-5034] gi|308112747|gb|EFO50287.1| outer membrane efflux protein [Vibrio parahaemolyticus K5030] Length = 500 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 118/479 (24%), Positives = 224/479 (46%), Gaps = 50/479 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNL 73 LAGC VGP+Y P + T + N+ + +K WW F+D LN++V+ QN+ Sbjct: 15 LAGCAVGPDYQAPTTSMAETYLNAENAGLSTDSQHVKFWWTKFHDPVLNQMVQDMQSQNI 74 Query: 74 TILQATERINAA---KENILSVRADLFPSSYASISHRFIPN----------LKTNSTG-- 118 + A ER+ A K + S + ++++F N L + +G Sbjct: 75 PLKVAAERVKMANNYKTMVESFKVPTINLGAGYMNYQFSKNDSSLGPILNPLSDSVSGLP 134 Query: 119 -----------QLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--S 158 Q D W++DLFG R +++ A + AQ+ + LN + + Sbjct: 135 PQIGNVTLMDNQHDGVFAGASIAWEVDLFG-RIDRQTNAAQIRLEQAQIYQSGLNTVITA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 LI +Y+ + ER+ +A L+ ++ ++L G S L L + +A + ++ES Sbjct: 194 DLIHNYLQYQGASERLELAKSNLEDQRRTLDLVGKVVRSGYGSDLDLAQAKATLAAMESL 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R DI Sbjct: 254 VPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHS--VPVMQNMVPVGLPSDLLKRRTDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + +D YP L G+ L + D+ F + W + +F Sbjct: 312 RLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSWNLF 371 Query: 336 DKGKIKS----NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 D G+ ++ N R +S+ +++Q TV A+ E E+ L + ++ ++ A++ Sbjct: 372 DGGRGEAIEAINQARFDSAT----LSYQHTVEAALAETESTLFTYGRSQENQRRIDEALK 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + YR G L +LD +R ++ AK Q A++ + LY ++G + Sbjct: 428 ATNNAVNKAKSLYRAGLIDHLSVLDAQRQQRMMQDQQIAAKLQTAQATIALYKSLGGDW 486 >gi|258648391|ref|ZP_05735860.1| putative outer membrane efflux protein OprM [Prevotella tannerae ATCC 51259] gi|260851561|gb|EEX71430.1| putative outer membrane efflux protein OprM [Prevotella tannerae ATCC 51259] Length = 460 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 118/469 (25%), Positives = 216/469 (46%), Gaps = 48/469 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-------NLINIDTLKWWESFNDTSLN 62 L V L+ C + Y +P + + Q + + IN L W + F+D L Sbjct: 9 LLGVSLSSCRIYSNYERPKLDVQMEQLYRDTTTVDQALKGDTINFGNLSWPDVFSDPHLQ 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ--- 119 L+++ L++N+ + A I A+ + R FPS S S I ++ +T + Sbjct: 69 SLIRLVLEKNVDLRTADLTIQKAEAGLQVSRLAFFPSLSFSPSGT-ISIVEGGTTSKTYN 127 Query: 120 --LDSDWKIDLFGQRRHIESSLANLDSAYA--QVDIAKLNVISKLIPS----YIDARHFK 171 L + W+ID FG R+ A S Y A+ ++ + LI S Y Sbjct: 128 IPLQASWQIDAFGSLRN-----AKKQSEYGVLAAKAARQSIQTALIASTANLYYTLEMLD 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ L+ KN+E + G T+ ++ + +A SI + IPTLE R + Sbjct: 183 AQLQTTKSTAALWDKNVEAMEVMMQAGMTNAAAVSQAKANRLSILTTIPTLESQIRKTEN 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSV 289 ++ LL E H +++ + +L P ++ G+PA L+ NRPD+R E KLA Sbjct: 243 SLCALL----HEAPHPIERGAIQ---DLSFPSVLSAGVPAQLLSNRPDVRAAEYKLASCF 295 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRA 347 + A S YP++++NG+ T++ W +F + P+F +G++++N++ A Sbjct: 296 YGVNKAYSAFYPNITINGTGGWTNNLGMITNPGMWVANFVGSIVQPLFARGQLRANLKIA 355 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLS 400 ++ + + +++ +LNA EV NAL + I + K+V +LQ +VE + + Sbjct: 356 KAEVEAAQLNFEQKLLNAGNEVSNALANYQTSLLKIQQRTKLVEELQKSVE------TTN 409 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +I R S L+ L ++ + +++L A++ + LY A+G G Sbjct: 410 LIFKHDNRVSYLETLTAQQGLLQAQLNLISDNFDRAQAVISLYQALGGG 458 >gi|167562813|ref|ZP_02355729.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 463 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 198/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----R 107 W F D SL L+ AL N + AT RI A+ RAD PS ++ + + Sbjct: 43 WRAYFTDPSLRALIDTALANNRDLRIATLRIQEARGLYGVARADRLPSIDGNLGYERTRQ 102 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 103 YDPVLRESATSTLYRAGVGVSAFEIDLFGRVKSLSDAALAEYFATAEGRRAARISLIAEV 162 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 163 ASTYVTERALVDQLKLAERTLAARDATYALTRRRYAAGTSTAIELRTAEMLVASARASKA 222 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F + + ++ G+ +DL+ RPDIR Sbjct: 223 ALEREHTQATSALKLLAG----DFRTTLPADAPALDALAVAAVSPGLSSDLLEQRPDIRQ 278 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L G+++ F G ++ W+F P+L LPIF Sbjct: 279 AEQRLVAANANIGAARAAFFPRIALTTELGAVSDAFSGLFSGGSSVWTFAPRLTLPIFAG 338 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 339 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLDAQQAVYGADAERL 398 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 399 RLAERRYGSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 452 >gi|224367195|ref|YP_002601358.1| proton-shuffling outer membrane efflux protein (OprM-like) [Desulfobacterium autotrophicum HRM2] gi|223689911|gb|ACN13194.1| proton-shuffling outer membrane efflux protein (OprM-like) [Desulfobacterium autotrophicum HRM2] Length = 486 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 219/479 (45%), Gaps = 48/479 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKP---------HMPLLP----TQFSIGNSKNLINID--TLK 51 + ++ LL GC +GP++ P PL P + +G+ +N+I + T Sbjct: 11 LIGVYAFLLTGCALGPDFQPPVPPDVAGYTSTPLTPNFEASPTMLGDPQNIIKGERPTKY 70 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASIS---H 106 WWE L+ L+ AL+ N T++ A + A+E + + +A L+P + A+++ Sbjct: 71 WWEGMGVEKLDMLISEALEHNPTLMAAAASLRQAQE-LYAAKAGSTLYPQAEANLTGQRQ 129 Query: 107 RFIPNLKTNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDIA 152 RF PN S+G +D + L+ G RR +E+ A D Q++ A Sbjct: 130 RFNPN----SSGLIDDARQFGLYNASLGVTYTFDLAGGNRRALEALAARSDYQQFQLEGA 185 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L +++ ++ + I K + I IL + IEL+ + G + L+ ++ Sbjct: 186 RLTLVANIVTTAIAQARLKRQTEIIENILTSQENQIELTLERIRLGHGEPDDALALQTQL 245 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + L + N H ++ L+G P L + +F L + + IP++L Sbjct: 246 EQTRAQLTPLRYQLQQNNHFLAVLVGRAPGERLLPSFTLE--DF--TLPPELPLLIPSEL 301 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDI E L S A+ G+A S LYP L+L+ GS ALT F G + WS Sbjct: 302 VHARPDILGAEALLHASNAEYGVAVSKLYPQLNLSADLGSQALTTGALFGGGSAVWSLVG 361 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L P+F G + + R A S+ +Q VL A++ V + L ++ D K + L Sbjct: 362 QLTQPLFKPG-LPAEKRAALSAFDAAAANYQSVVLEALRNVADVLRALENDSKRLEALSA 420 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A +KS+ + YR G S D+L ++ + E+DL+ + + + Y A+G Sbjct: 421 ADLAAEKSLESAQRRYRLGATSYYDLLIAQQQRLQTELDLTEGQAKRLVNTAAFYQAMG 479 >gi|58582401|ref|YP_201417.1| outer membrane protein OprN precursor [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426995|gb|AAW76032.1| outer membrane protein OprN precursor [Xanthomonas oryzae pv. oryzae KACC10331] Length = 503 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 49/486 (10%) Query: 9 SLFIVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNK 63 +L ++L GC +GP YTKP + + +++ L WWE D +L + Sbjct: 17 ALSTLMLGGCMLGPNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELQDPTLTQ 76 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNL---- 112 LV AL + + A R+ A + RA+ P+ +YA H + L Sbjct: 77 LVTQALADSPNLRAAQARLRANRALAQRRRAERLPTLNASALYAYAEPPHTIVDTLGGLQ 136 Query: 113 -------------------KTN--STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVD 150 KT S G D+ W++D+FG+RR E +LA ++ A++ Sbjct: 137 QQGQPGQPPAAGNQALDLEKTQIYSAG-FDASWELDVFGRRRRAAEGALAQAQASEAELA 195 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + +++ Y++ R + R++IA LD ++ ++L + QGA S L + ++ Sbjct: 196 DAQVQLAAEVGQVYLNYRGLQARLAIADANLDKIRQTLQLVQQRRGQGAASDLQVEQIAT 255 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--P 268 +++ ++ LE + ++ ++G + + QP +P + + Sbjct: 256 QVQQQQAQRLPLEMQSQEAQDQLALMVGRAPGALDSLL----SAPQPLPMLPTQVRVDDA 311 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SF 326 LIR RPD+R E++LA S A+IG A + +P +SL G ++ S +N+ F Sbjct: 312 GALIRRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALARF 370 Query: 327 G-PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 P L IFD GK ++ + +A +S + ++ TVL A+++ +AL +K + Sbjct: 371 AVPMLRWSIFDFGKTRAQVEQARASNAGRTAAYEGTVLAALQDANSALARFGSARKQLVV 430 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + A +S L G S +D+LD++R + + A+ QL +YV L + Sbjct: 431 ARQAEASATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKS 490 Query: 446 IGSGYN 451 +G G++ Sbjct: 491 LGLGWS 496 >gi|58039247|ref|YP_191211.1| Outer membrane channel protein [Gluconobacter oxydans 621H] gi|58001661|gb|AAW60555.1| Outer membrane channel protein [Gluconobacter oxydans 621H] Length = 471 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 108/453 (23%), Positives = 200/453 (44%), Gaps = 64/453 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ F+D L L + QNL+ AT + ++ ++ A+ FP Sbjct: 7 WWQIFHDPELTSLEDRLVNQNLSFRLATANLAQSRAQLIMAGAERFPALSATGSYQRSQY 66 Query: 99 ------------------SSYASISHRFIPNLKTNSTGQ-----------LDSDWKIDLF 129 S SI P L+ + G +D+ ++IDL+ Sbjct: 67 STKQLQEIIGHVAGGIAKSEGGSIGSTVGPMLQDAAGGANIPLLNQWRSAIDATYEIDLW 126 Query: 130 GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 G+ H D+A A + S LI D H + Q L + + NI+ Sbjct: 127 GRVAH------QYDAAKADLQATDEERRSVLIAQQADMAHGYMSLRGDQQRLKILRDNIK 180 Query: 190 -------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ ++ G ++L + +A + + LE++ + ++ LLG P Sbjct: 181 VLTQIATIAQDRYRGGLVTELDVDSAQARLHDTQGQEAQLEQAVAQEENALALLLGAPPE 240 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 ++K N P + + +G+P++L RPDIR E +L +VA++G A +D YP Sbjct: 241 SLNTELEK--NAGVPVVPPVVPVGLPSELAHRRPDIREAEARLRGAVAEVGEATADFYPK 298 Query: 303 LSLNGSIALT----HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 +++N D F +N W+ GP + LPIF G++ + + + + I+ Sbjct: 299 VTINADFGFQTLSFRDLGF--WNARAWNVGPSISLPIFQGGRLYGQLELKKYAQKAAAIS 356 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +Q+TV+ A +V+NAL + +++ LQ+AV + K+++L+ YR G + L++L+ Sbjct: 357 YQQTVIKAWHDVDNALIAYRDEQLHRQGLQNAVNDNGKALALAQSQYRSGLTNYLNVLNA 416 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++DL+ + LA + LY A+G G+ Sbjct: 417 QAQLQSAQLDLANSDATLATNLTRLYNALGGGW 449 >gi|84624276|ref|YP_451648.1| outer membrane protein OprN precursor [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576109|ref|YP_001913038.1| outer membrane protein OprN [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368216|dbj|BAE69374.1| outer membrane protein OprN precursor [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520561|gb|ACD58506.1| outer membrane protein OprN [Xanthomonas oryzae pv. oryzae PXO99A] Length = 497 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 49/486 (10%) Query: 9 SLFIVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNK 63 +L ++L GC +GP YTKP + + +++ L WWE D +L + Sbjct: 11 ALSTLMLGGCMLGPNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELQDPTLTQ 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNL---- 112 LV AL + + A R+ A + RA+ P+ +YA H + L Sbjct: 71 LVTQALADSPNLRAAQARLRANRALAQRRRAERLPTLNASALYAYAEPPHTIVDTLGGLQ 130 Query: 113 -------------------KTN--STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVD 150 KT S G D+ W++D+FG+RR E +LA ++ A++ Sbjct: 131 QQGQPGQPPAAGNQALDLEKTQIYSAG-FDASWELDVFGRRRRAAEGALAQAQASEAELA 189 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + +++ Y++ R + R++IA LD ++ ++L + QGA S L + ++ Sbjct: 190 DAQVQLAAEVGQVYLNYRGLQARLAIADANLDKIRQTLQLVQQRRGQGAASDLQVEQIAT 249 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--P 268 +++ ++ LE + ++ ++G + + QP +P + + Sbjct: 250 QVQQQQAQRLPLEMQSQEAQDQLALMVGRAPGALDSLL----SAPQPLPMLPTQVRVDDA 305 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SF 326 LIR RPD+R E++LA S A+IG A + +P +SL G ++ S +N+ F Sbjct: 306 GALIRRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALARF 364 Query: 327 G-PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 P L IFD GK ++ + +A +S + ++ TVL A+++ +AL +K + Sbjct: 365 AVPMLRWSIFDFGKTRAQVEQARASNAGRTAAYEGTVLAALQDANSALARFGSARKQLVV 424 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + A +S L G S +D+LD++R + + A+ QL +YV L + Sbjct: 425 ARQAEASATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKS 484 Query: 446 IGSGYN 451 +G G++ Sbjct: 485 LGLGWS 490 >gi|294788734|ref|ZP_06753975.1| outer membrane multidrug efflux protein OprB [Simonsiella muelleri ATCC 29453] gi|294483216|gb|EFG30902.1| outer membrane multidrug efflux protein OprB [Simonsiella muelleri ATCC 29453] Length = 473 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 109/456 (23%), Positives = 216/456 (47%), Gaps = 19/456 (4%) Query: 10 LFIVLLAGCTV-------GPEYTKPHMPLLPT-QFSIGNSK-NLINIDTLKWWESFNDTS 60 LF + L+ C++ P+Y +P + + T +F + S+ N I +L W + F D Sbjct: 13 LFSLALSACSMVKPVVELAPQYEQPQVDVPETFKFDVPASQANGIQAASLGWRDYFADPR 72 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNST 117 L+ L+++AL+ N + A ++ + R PS S + T+ Sbjct: 73 LHALIELALKNNTDLRTAVLNVDQVRAQYAISRTKELPSLSGSGGVVRSGSAMGASTSYN 132 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L++ +++DL+G+ ++ +++L + + A D L +I+ + +Y + +E +S+ Sbjct: 133 VGLNTSYELDLWGRVKNTNDAALQSYFATEAAKDATHLALIASVAKAYFAQLYAEESMSL 192 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L Y++ L+ ++ G S + L EA+I+S +S ++ + ++ L Sbjct: 193 AKRTLSSYEETYRLAKVRHNAGVISAVDLRAQEAQIESAKSSYTAAVRAKEEARNALALL 252 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 + + L + S F+ + G+ + ++ NRPDIR E L + A IG+A+ Sbjct: 253 ISQEIPQNLPKGKPLSQQFKIQ---NLPAGLSSTVLLNRPDIRAAEYNLRAANANIGVAR 309 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P++SL G++ L N F WS G L +PIFD G ++N+ + + Q+ Sbjct: 310 AAFFPTISLTGALGLVSPQLGNLFQSNRKTWSAGANLSVPIFDWGSNQANLEAVKIAQQK 369 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ V +A K+V +AL + + + + + L + Y+ G S LD Sbjct: 370 TVVAYESAVESAFKDVSDALVARAALAAQYEAAAAQRKAYNERLRLINLRYKYGVASSLD 429 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD ER++ + L + L + D+Y A+G G Sbjct: 430 LLDAERSSYSADSSLLSTQLNLLNNLADVYKALGGG 465 >gi|160900567|ref|YP_001566149.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160366151|gb|ABX37764.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 493 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/413 (24%), Positives = 196/413 (47%), Gaps = 17/413 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 +WW +F D +L+ LV A N +I A R+ A+ S A+ P + + R Sbjct: 65 QWWLAFADPALDALVDKATLDNQSIQAAAARLAEARALARSANAERLPQLGLGAGATRGA 124 Query: 110 PNLKTNST-------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 K + T L+ +++DLFG+ + ++S + + A + +L V +++ Sbjct: 125 GLDKASGTRPATLVNAGLNLSYEVDLFGRISQAADASRLDAEGREALLQSTRLAVQAEVA 184 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R ++ + ++ Y+ + LS + G ++L + +++AE+ + ESD Sbjct: 185 QTYLQLRALDAERALMRETVEAYRDTLRLSERRLQAGDIAELDVARIQAELSATESDALA 244 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L++ H ++ L+G A+ F + P+ I G+PA ++ RPDI Sbjct: 245 LDRQRAQVEHALAVLVGDSASRF-GLGEGAWTTALPS----IPAGVPATVLMRRPDISAA 299 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 ++ + + +++G+AK+ +PS+SL G+ + F W G L LP+FD G Sbjct: 300 QRAVFAAQSRVGVAKTAWFPSISLTGAAGHASPEVGDLFKWSMRSWGVGALLSLPLFDGG 359 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++ ++ A + +++ L A +EVE+ L+SI ++ T AV K++ S Sbjct: 360 RREAGVQAAGAQLDAALAAYRQQALVAFQEVEDQLSSIRILQEQSTVQGQAVVAAKRATS 419 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS YR G S LD+LD R+ + K ++ V L A+G G++ Sbjct: 420 LSDTRYRNGYVSQLDLLDARRSELRNRRQALQVKSAQYQAAVGLIRALGGGWD 472 >gi|254561664|ref|YP_003068759.1| outer membrane lipoprotein [Methylobacterium extorquens DM4] gi|254268942|emb|CAX24903.1| putative outer membrane lipoprotein precursor [Methylobacterium extorquens DM4] Length = 495 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/418 (22%), Positives = 198/418 (47%), Gaps = 34/418 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLK---------------WWESFND 58 +GC VGP+Y++P + P F G + +L + K WW +FND Sbjct: 15 SGCLVGPDYSRPSVET-PLGFKQGGMREDSLAYVQAQKGWRPAAPNDAAERGDWWRAFND 73 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTN 115 +L++L++ N + + A+ + RA LFP+ + R + +T Sbjct: 74 PTLDRLIRSIDVDNQNLRAQVAVYDQARALVAQARAALFPTVIGAPGITRSRALGAERTT 133 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + Q ++W++DLFG RR IES +A+ ++ + + + +L++ ++L +Y+ R+ Sbjct: 134 VSLQGQANWELDLFGGIRRQIESDVASAQASASDLALVRLSLQAELATNYLQLRYQDSLK 193 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + ++ +K+++ ++ ++ G ++ ++ + ++++ ++ + ++ H ++ Sbjct: 194 RVLEENVEGFKRSLSIAENQYNAGVAARSDVITAQTQLQTTQASLIAVDLQRATFEHAVA 253 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L G P +E F P P + +GIP+DL+ RPDI E+ + +I Sbjct: 254 ILTGRPPSEV-------KLPFAPLPVRPPSVPVGIPSDLLERRPDIAGAERLVQAQSEQI 306 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A S YP+++L+ S T + F N WS FD G + ++ A + Sbjct: 307 GVAVSAFYPTVTLSASGGFSGATSNGVFSAANRVWSIAANGSQVFFDGGARAAVLQTARA 366 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++TVL A EVEN L + + K AV ++++ +++ YR G Sbjct: 367 AYEAAVANYRQTVLTAFGEVENGLAGVRILARQQAKQDEAVASARRAVEITLNEYRAG 424 >gi|167569995|ref|ZP_02362869.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 456 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/414 (24%), Positives = 198/414 (47%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----R 107 W F D SL L+ AL N + AT RI A+ RAD PS ++ + + Sbjct: 36 WRAYFTDPSLRALIDTALANNRDLRIATLRIQEARGLYGVARADRLPSIDGNLGYERTRQ 95 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 96 YDPVLRESATSTLYRAGVGVSAFEIDLFGRVKSLSDAALAEYFATAEGRRAARISLIAEV 155 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + S + Sbjct: 156 ASAYVTERALVDQLKLAERTLAARDATYALTRRRYAAGTSTAIELRTAEMLVASARASKA 215 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F + + ++ G+ +DL+ RPDIR Sbjct: 216 ALEREHTQATSALKLLAG----DFRTTLPADAPALDALAVAAVSPGLSSDLLEQRPDIRQ 271 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L G+++ F G ++ W+F P+L LPIF Sbjct: 272 AEQRLVAANANIGAARAAFFPRIALTTELGAVSDAFSGLFSGGSSVWTFAPRLTLPIFAG 331 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A++ +++T+ A +EV +AL + ++ + Q + + Sbjct: 332 GRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQIDAQLDAQQAVYGADAERL 391 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G S L++LD +R+T + +L K+ + + LY A+G G++ Sbjct: 392 RLAERRYGSGVASYLELLDAQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 445 >gi|332381552|gb|AEE66399.1| outer membrane lipoprotein [Bordetella pertussis CS] Length = 460 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/463 (23%), Positives = 216/463 (46%), Gaps = 31/463 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPL---LPT----QFSIGNSKNLINIDTLKWWE 54 ++R + SL + LAGC++ P Y +P P+ P+ + + W + Sbjct: 5 VMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRD 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F D L +L+ ++L N + A + AA+ N PS A IS + Sbjct: 65 FFGDPLLQELLALSLANNRDLRVAALNVEAARLN---------PSGQAGISRSY------ 109 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKER 173 G S W++DLFG+ R + L A + +A +L ++++ +Y+ R +E Sbjct: 110 -QVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQEL 168 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++ Q L +++ +L+ + G ++L L + E +++ E ++ + + + + Sbjct: 169 LALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNAL 228 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G P + Q+ + + + G+P+DL+ RPDIR E +L + A I Sbjct: 229 VLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASI 288 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G A++ +P +SL GS A T S G + WSF P++ +PIF G +++++ A+ Sbjct: 289 GAARAAFFPRISLTGS-AGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAK 347 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++ + + +EV +AL ++ + + V+ ++++ LS Y+QG Sbjct: 348 IQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGI 407 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L +LD +R+ + L + + + LY A+G G++ Sbjct: 408 DNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWS 450 >gi|308186345|ref|YP_003930476.1| RND efflux system, outer membrane protein precursor [Pantoea vagans C9-1] gi|308056855|gb|ADO09027.1| Probable RND efflux system, outer membrane protein precursor [Pantoea vagans C9-1] Length = 460 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/467 (23%), Positives = 219/467 (46%), Gaps = 35/467 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSL 61 +R + + +LL GC E +P+ P + S+G S WW +F+D L Sbjct: 3 VRLLIGVMALLLTGCATQVEKAPSSLPI-PDAWRNSVGPSA----APEAAWWRAFHDEYL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-- 119 N+LV AL+ N IL A R++ + + + + D FP+ A ++ L ++ TGQ Sbjct: 58 NRLVTQALRNNPDILTARSRVDQYRAQLRATQGDNFPTLSAGVAATRERTL-SSVTGQPY 116 Query: 120 --------LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L +++++DL+G R I ++ A L + A A+L + S + Y++ Sbjct: 117 ETDVFQGLLQANYEVDLWGARSSSISAAQATLAAQQAAASAAELTIASSVASGYLNLCAL 176 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++ + L +++L+ +F G TS+L ++ +E +S + +P L+ Sbjct: 177 DEQLRVTEATLATRNNSLKLAQRQFETGYTSRLEWMQAASEYQSARAQMPQLQHQITQQE 236 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +S L+G ++Q + P + +P++L+ RPDI +++L + A Sbjct: 237 NALSILVGMNPRSIAR--RQQFDQILPQQMPSL---LPSELLNRRPDIVQAQRQLLAADA 291 Query: 291 KIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + +++ L P L+L + L D+ F WS G + P+ ++ + + Sbjct: 292 SLASSRAKLLPGLNLTATGTLQSSVLHQLADDPF----RLWSVGGSILAPLLNREALTAQ 347 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + ++ + +++ V NA EV +A+ +I + ++ + +LQ +++ ++ Sbjct: 348 VDVSMATRNQALYGYEKVVRNAFAEVSDAIDAIRQGEEQLQELQKQEAYVTEALRIARNR 407 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S LD LD +R +++ K L + +DLY A+G G+ Sbjct: 408 YQNGYASYLDELDAQRTLFSTQLNRVTVKNNLLLAQIDLYRALGGGW 454 >gi|238023818|ref|YP_002908050.1| RND efflux system outer membrane lipoprotein NodT [Burkholderia glumae BGR1] gi|237878483|gb|ACR30815.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] Length = 510 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 115/436 (26%), Positives = 208/436 (47%), Gaps = 43/436 (9%) Query: 20 VGPEYTK---------PHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y + P L G+ K D +WW+ F D L+ L + Sbjct: 29 VGPDYRRPAAATPAAFKEAPTLAAGEQAGSWKPAEPADAEHRGEWWKVFGDPVLDALEQQ 88 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FPS A S + +F P N+ Sbjct: 89 ALDANQNLKAAAARVQEARAATRAARSAWFPSLDAGFGPTREGLSSASQFRPQGSGPVNA 148 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 149 TLWRAQGSVSYEADLFGRVSRNVEASRADAAQSEALFQSVRLALQADVAQNYFELRQLDA 208 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L +++++LS +F++G L + + + E+ S ++D + + + H Sbjct: 209 DQDLYRRTVALREESLKLSQRRFSEGDIDDLDVSRAKNELASAQADAVGVARRRAASEHA 268 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ LLG +F KQ+ L IP G+P+ L+ RPD+ E+ +A + A+I Sbjct: 269 LAILLGKAPADFAF---KQAPIAPVTLRIPP--GLPSALLERRPDVAAAERAMAAANARI 323 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP----KLYLPIFDKGKIKSN 343 G+AKS +P L ++GS ++ S G WS GP L LP+FD G+ + Sbjct: 324 GLAKSAYFPKLDISGSFG--YEASTLGELFMWSSRTFLLGPFAGTALTLPLFDGGRRSAG 381 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +++A +S +EQ +++ VL A +EVE+ L+ + + + AV +++ LS Sbjct: 382 VQQARASYEEQVANYRQQVLVAFREVEDQLSDLRLLDEQIRAQGEAVRASQRAAKLSRTQ 441 Query: 404 YRQGRYSLLDILDIER 419 Y++G+ + LD++D ER Sbjct: 442 YQEGQIAYLDVIDSER 457 >gi|163856906|ref|YP_001631204.1| outer membrane exporter protein [Bordetella petrii DSM 12804] gi|163260634|emb|CAP42936.1| outer membrane exporter protein [Bordetella petrii] Length = 521 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 110/472 (23%), Positives = 207/472 (43%), Gaps = 48/472 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--------------TLKWWESFNDTSLN 62 GC VGP++ +P P ++S + D +WW F L+ Sbjct: 29 GCAVGPDFEQPAAPAA-ERYSAAATPAATAGDDRTPAQRLHAGMDIPAQWWTLFRSPELD 87 Query: 63 KLVKIALQQNLTILQATERINAAKE----------------NILSVRADLFPSSYA-SIS 105 +LV+ AL + T+ QA R+ A+E N+ R + PS+Y ++ Sbjct: 88 RLVREALAHSPTLEQARARLLQAQEEFRAESGARTLPSVDANLSGARQKVDPSAYGVPVT 147 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N++ +D + +DLFG +RR +E LA +D ++ A++ + + ++ + Sbjct: 148 QPPAPFTLYNAS--IDVSYTLDLFGGERRAVEGLLAQVDYRRHELQAARMTLAANVVTAA 205 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + R+ LD +++ + G + L + + E+ + + +P LE+ Sbjct: 206 IRQAGLQARLDATQAQLDAQAHQLDIVRQRHQAGGAAALEVRRQESLLAQTRATLPALEQ 265 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 H ++ LG PA + Q+ L +P+++ G+P+ L R RPDI Sbjct: 266 DIERTRHQLAVYLGRLPAQADWPPLSLQA------LQLPLDVPLGVPSQLTRQRPDILAA 319 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKG 338 E + A +G+A ++LYP +L GS + G N WS L P+F G Sbjct: 320 EALWHRAAADVGVATANLYPRFTLTGSFGSQRTRAGDVADGVNV-WSLALGLTQPLFHGG 378 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++ R AE++ Q +++TVL +++V +AL+++ D + A + + Sbjct: 379 ELRARRRAAEAAYQAAAAAYRDTVLQGLQQVADALSAVQADADTLQARAEAERQAEAAYR 438 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y+ G S L +LD +R + + A+ L A+G G+ Sbjct: 439 ITAQQYQAGGVSQLALLDAQREQLRTRAERIQAQADRHADTAALLQALGGGW 490 >gi|302188118|ref|ZP_07264791.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 440 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 201/423 (47%), Gaps = 41/423 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 WW+ FND +L L+++A + ++ +A RI A+ + AD P S A I Sbjct: 20 WWQQFNDPALATLLRLAQADSPSLDKALARIAQARATLDGSFADRLPQVSGGVSKSRAGI 79 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + + T S LD+ W++DLFG+ RR E+S L++ A++++ +++ Sbjct: 80 TQSGLKQSGTTSGATLDASWELDLFGKLRRTDEASRNLLEARVNDWHDARVSLAAEVGDD 139 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL--------------SLVKLE 209 ++ R + ++ ++ L+ + F G T+ +L+K + Sbjct: 140 FVQYRGCQMLVNAYRDQAQSQEQTARLTRVSFQAGFTAASDSSLSDASAAASNATLIKQQ 199 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIP 268 +E + + L S V + LG+ QP L +++ IP Sbjct: 200 SECDVLLKSLVALTGSDEEKVREV---LGHTPARLP----------QPAL---LDVREIP 243 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP 328 ADL+R RPD+ E++LA + A+IG A++D PSLSL G+ + ++ +WS GP Sbjct: 244 ADLVRQRPDLASSERELAAANAQIGAAQADRLPSLSLVGAFEVGTTTGI--FSRNWSLGP 301 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L +P+FD GK ++ + A + T+++T+ A+ EVE +L ++ ++ Q Sbjct: 302 QLTVPLFDAGKRRAAVDSARAEYDTALATYRQTLRTAVMEVEQSLVRLDAARRSQASTQR 361 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A + ++ S + N++ G SLLD R+ +++L ++ + ++ LY A+G Sbjct: 362 ASDGYEASFEATDRNWQAGNASLLDREVARRSALSAQIELITVQQNQVRYWIALYKALGG 421 Query: 449 GYN 451 G+ Sbjct: 422 GWQ 424 >gi|124381814|ref|YP_001024205.1| outer membrane efflux protein OprB [Burkholderia mallei NCTC 10229] gi|254200519|ref|ZP_04906884.1| outer membrane efflux protein OprB [Burkholderia mallei FMH] gi|254204543|ref|ZP_04910896.1| outer membrane efflux protein OprB [Burkholderia mallei JHU] gi|147748131|gb|EDK55206.1| outer membrane efflux protein OprB [Burkholderia mallei FMH] gi|147754129|gb|EDK61193.1| outer membrane efflux protein OprB [Burkholderia mallei JHU] Length = 553 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 59 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 118 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 119 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 178 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 179 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 238 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 239 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 298 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 299 LVLLIGEPLPDDLP--ADLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 355 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 356 GAARAAFFPKISLTSAFGTASTTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 415 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 416 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 475 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 476 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 516 >gi|83311414|ref|YP_421678.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] gi|82946255|dbj|BAE51119.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] Length = 616 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 126/477 (26%), Positives = 213/477 (44%), Gaps = 38/477 (7%) Query: 1 MNILRAIFSLFIVLLAG---CTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWES 55 ++ L A + + LL G C + P Y +P L PT + + + +WW Sbjct: 9 VSALAARWVMIAALLMGNTACNMTPTYERPKQEL-PTSYRNPLPEPSPEMPKPLSQWWTI 67 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------ 109 F LN LV AL N + AT RI A+ S + L P+ AS R I Sbjct: 68 FGSEELNTLVAEALANNHDLKAATARILQAEAQAGSAASSLLPTITAS-GKRSIDSPQGG 126 Query: 110 ----PNLKTNSTGQLDS-----DWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISK 159 P+ TN + +L S W++DL+G+ R E+S A + L +IS Sbjct: 127 QGSDPSPPTNRSHRLSSAYVSASWEVDLWGKIRASEASSLASAFANVHDREAVGLTLISD 186 Query: 160 LIPSYIDARHFKERISIAHQ----ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++ +YI +R ++A + +YK E L G +S L L + + Sbjct: 187 VVLTYIQYLEGLDRETVARSNIANMKAMYKAVTERVRL----GESSNLELAQQRNVLAQT 242 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E+ IP + + ++ LLG P + + L +++G+P DL+ R Sbjct: 243 EATIPPIVLQRERAFNKLAVLLGRPP----QTLALNGKTLRDLLVPEMSVGLPTDLLLRR 298 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYL 332 PDIR E L + A IG+A++ L+P+LS++G A DN + ++ L Sbjct: 299 PDIRKAEANLIAANANIGVARAKLFPTLSISGDCGWAAQYFDNITNPTSIFFTMAGTLAA 358 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD GK +S+I +ES E T+Q+T+L ++++VE++L ++ + Q ++ Sbjct: 359 TIFDNGKTRSDIEYSESRYAELVETYQQTILTSLRDVEDSLMAVRLQGDLEVAQQEVLQA 418 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + LS +R G L++L+ +R + E A+ ++ + LY A+G G Sbjct: 419 SLDAYGLSSEAFRLGMVDYLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGG 475 >gi|329850177|ref|ZP_08265023.1| outer membrane protein oprM [Asticcacaulis biprosthecum C19] gi|328842088|gb|EGF91658.1| outer membrane protein oprM [Asticcacaulis biprosthecum C19] Length = 453 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 217/463 (46%), Gaps = 43/463 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+ CT+ P Y + +P+ P QF ++ S TL W + F D L ++ +L Sbjct: 6 LSACTMAPTYERGILPV-PGQFPAEALSVSAE-TQAQTLAWRQVFLDPRLQAVIAQSLDN 63 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-------- 123 N + A + ++ RA L P A +S TGQ+D+ Sbjct: 64 NRDLRVAVLNVERTRQQYRIQRAGLLPGVNAGLSG------TRGDTGQVDTSGNPVGETE 117 Query: 124 ---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 W+IDLFG+ R + +++ +A A++++IS + +++ +E+ Sbjct: 118 VYSATIGAAWEIDLFGRVRSLSQAAQGTYFAAGENRKAAQISLISAVASTWLTLAADQEQ 177 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + L +++++L+ +F GA+ +L+L + + + D+ L + + + + Sbjct: 178 LRLSRETLRSREESLDLTQRRFDAGASDQLALRQAQVLTEQARGDVALLSALVQQDQNAL 237 Query: 234 STLLGYP-ATEFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVA 290 L+G A E L + F P+ + + +G+P++++ RPD+ E L + A Sbjct: 238 RLLVGADVAAENLP------DAF-PDRAVLADLPVGVPSEVLLKRPDVLSAEYNLKAANA 290 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS+SL GS+ + F G +T W+F P + +PIF G ++N+ A Sbjct: 291 NIGAARAAFFPSISLTGSVGKASTDLGQLFDGTDT-WTFSPSISVPIFAGGANRANLGVA 349 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +S +++ + +A ++V + L + + + + VE S +L+ + QG Sbjct: 350 NASRDIALAQYEQAIQSAFRDVSDQLATRSTIDERLAAQTRVVEAAADSNALAQARFTQG 409 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L ++D ER + + L + A + V+LY A+G G+ Sbjct: 410 VDSRLTLVDAERTSYGAQQQLISIRLVRAVNLVNLYAALGGGF 452 >gi|163857572|ref|YP_001631870.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163261300|emb|CAP43602.1| probable outer membrane efflux protein [Bordetella petrii] Length = 500 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 107/484 (22%), Positives = 212/484 (43%), Gaps = 42/484 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL----------------LPTQFSIGNSKNL----- 44 A+ + +LAGC++ P+Y +P P+ PT S +++ + Sbjct: 10 ALSACVAAVLAGCSLAPDYHRPESPVPGDWPAQPKVQYGGYDQPTSLSEQSAQAVAPQGA 69 Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 + + W + F D L L++++L N + A +R+ A+ R +PS A I Sbjct: 70 VPAADIGWRDFFRDPRLQALIELSLVNNRDLRMAVQRVEEARAQYGVQRGAQWPSIGAGI 129 Query: 105 S---HRFIPNLKTNSTGQLD---------SDWKIDLFGQRRHIESSLAN--LDSAYAQVD 150 R N+ + + + ++IDLFG+ R++ + L + AQ Sbjct: 130 EGTRQRVPANMSPTGSDTVGNTFQAGIGLTSFEIDLFGRLRNLSEAAYQQYLATEQAQRS 189 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + + ++ + +Y R + ++ + + L +++ L +F G S+L L + +A Sbjct: 190 V-HITLVGAVAQAYFTQRAAEVQLDLTRKTLASRQESYNLVKRRFDGGVASELELNQSKA 248 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + S +D+ L + +++ ++ L+G P L + + L + G+P+D Sbjct: 249 LLDSASADLAQLARVRAQSINALTVLVGVPLPADLPAPAEFGRD---QLLATVPAGLPSD 305 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI E +L + A IG A++ +P++SL G + + F G W+F Sbjct: 306 LLERRPDIMAAENQLKAANANIGAARAAFFPTISLTGMLGFASTSMGSLFEGGQRAWNFT 365 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + PIF G I+ + A++ +++T+ A +EV +AL + L+ Sbjct: 366 PSITTPIFAGGSIREGLNLAKARDNIAVAQYEQTIQQAFREVSDALAGEATYGAQLDALR 425 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +++ LS + Y G S L + + ++ L A + + V+LY A+G Sbjct: 426 SLQASTARTLELSNLRYTSGIDSYLQVQTAQVDFFSAQLGLVQAGLEALNNRVELYKALG 485 Query: 448 SGYN 451 G+N Sbjct: 486 GGWN 489 >gi|53716941|ref|YP_105712.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|121597060|ref|YP_989650.1| outer membrane efflux protein OprB [Burkholderia mallei SAVP1] gi|254174237|ref|ZP_04880899.1| outer membrane efflux protein OprB [Burkholderia mallei ATCC 10399] gi|262192860|ref|YP_001078389.2| outer membrane efflux protein OprB [Burkholderia mallei NCTC 10247] gi|52422911|gb|AAU46481.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|121224858|gb|ABM48389.1| outer membrane efflux protein OprB [Burkholderia mallei SAVP1] gi|160695283|gb|EDP85253.1| outer membrane efflux protein OprB [Burkholderia mallei ATCC 10399] gi|261826516|gb|ABM99103.2| outer membrane efflux protein OprM [Burkholderia mallei NCTC 10229] gi|261835008|gb|ABO03071.2| outer membrane efflux protein OprM [Burkholderia mallei NCTC 10247] Length = 512 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--ADLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASTTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|307822787|ref|ZP_07653018.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307736391|gb|EFO07237.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 451 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/450 (25%), Positives = 206/450 (45%), Gaps = 24/450 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++ L C + P++ +P + P Q+ S+ K+ ++ +WW +F LN L+ + Sbjct: 12 LLFLTACNLVPDFQRPDVET-PVQWYDASLPKQKSAVDP---QWWRAFGSAQLNHLITES 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLDSDWK 125 L N + A +R+ A+ A+L+PS R TGQ ++ Sbjct: 68 LFYNNDLAAARQRVEQARAQAKIAGANLWPSLGLQGDVTDTRNKTGDTQKETGQFAVAYE 127 Query: 126 IDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL+G R +S A L S D +L V+S + +Y + ER IA + L+ Sbjct: 128 VDLWGANRARRDSGSALLLSEVFARDALQLVVMSNVGEAYFNLLALAERKRIATEFLENV 187 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + + + GA S L + + + E+ + + + L + + + + ++ LLG+P+ Sbjct: 188 SYVLAIVEARHLAGAVSALDVAQQKTELATARASLDLLIQQYTLAENALTILLGHPS--- 244 Query: 245 LHYMQKQSNNFQP--NLYIPI-NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 Q S N + ++ +P+ N PA L+ RPDIR E +L + A IG+A++ YP Sbjct: 245 ----QTVSFNAERFFDMLLPVANALQPAALLERRPDIRQIEMQLIAANADIGVARAAFYP 300 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L LN + P + L P+F G+++ + A++ E ++ T Sbjct: 301 KLQLNLDTLIASPQ--PA-GVALAMAAGLTQPLFQGGRLEGGLENAQARNAELVEIYRRT 357 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 VL A KEVE+A + + + L AV++ + + LS+ YR G +L +R+ Sbjct: 358 VLTAFKEVEDAAAVRSNSTRRLQALADAVDMARLAYQLSLDRYRLGAIDYQTLLSTQRSL 417 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E A++ + + V LY A+G G++ Sbjct: 418 LTAENSQVQARQDVLVAMVQLYQALGGGWS 447 >gi|296115726|ref|ZP_06834352.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] gi|295977703|gb|EFG84455.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] Length = 489 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 119/483 (24%), Positives = 216/483 (44%), Gaps = 46/483 (9%) Query: 5 RAIFSLFIV------LLAGCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESF 56 RA F+ I+ LL C+VGP Y P LP + ++++ + ++WW+ F Sbjct: 14 RAFFAPLILAFVMTTLLGACSVGPHY-HPEHAFLPAHYHEDDARDPDFRPQELVQWWQQF 72 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKE-------------NILSVRADLFPSSYAS 103 +D L++LV +A N I +R+ A + S+ DL S+ S Sbjct: 73 HDPILDRLVSLAFDYNHDIRATAQRVLIAHALRDIEASQWYPQIDFSSLNGDLMKSTSLS 132 Query: 104 ISHRFIPNLKTNSTGQL-----DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 S + +L + L + W+IDLFG+ RH +++ ++ A L V+ Sbjct: 133 NSMPHVDDLPRDPHASLLSYGFGASWQIDLFGRIRHQVDARDRAVEQAQENRHAIMLTVL 192 Query: 158 SKLIPSYIDARHFKERISIAHQIL----DLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +++ +Y+ R + R+ I +Q + LY + I L G + L + + + + Sbjct: 193 AEVARNYMTLRGTQHRLDIINQHIVTAGHLYDRAIRLQQ----AGVGNTLHVAQTASLLH 248 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +S L K+ ++H + L+G+ P T + P P +P L+ Sbjct: 249 TQQSQRAALCKTISQSIHTLEILVGHIPGTLRAELITTVPLPRVP----PAPRTLPVRLL 304 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPK 329 R+RPDIR E+ A + IG + +YP++ + + A T F W Sbjct: 305 RHRPDIRRAERIYAQATDDIGTEVAGMYPNIVIPLTYTPNASTVSQLFAAGAQAWQALAM 364 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 LP+ G+ ++ +R A++ A+ + + + +L A++EVE+A+ + N KK L H Sbjct: 365 TSLPLGHGGQQQARVRSAQAIAEAGRLHYHQQILTALREVEDAIVAWN-GKKTHVHLLHQ 423 Query: 390 VELHKKSMSL-SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L + +L S Y G LL++L+ E++ + E A VDL++A+GS Sbjct: 424 AALQSRLANLRSRRLYEAGISDLLNVLETEQSALRAEDTELCAHIDWLHRTVDLHVALGS 483 Query: 449 GYN 451 G+ Sbjct: 484 GWE 486 >gi|187925229|ref|YP_001896871.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187716423|gb|ACD17647.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 525 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 118/490 (24%), Positives = 217/490 (44%), Gaps = 61/490 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN-------------------------------- 40 + AGCT+ P+Y +P P T F G Sbjct: 13 LFAAGCTMAPKYERPAPPTTST-FPTGGVYDTQPGATQPGAGQTDATQTGKQQPGATNAA 71 Query: 41 -SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 S N + W + F D + +L++IAL+ N + + + A+ VRA L P+ Sbjct: 72 RSANGQAAVDIGWRDFFVDPRMQRLIEIALKNNRDLRVSVLNMQASAAQYRIVRAGLLPT 131 Query: 100 --SYASISHRFIP-NLK--------TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYA 147 + AS S + P NL T S G L++ W+ID FG+ + + + +LA + Sbjct: 132 LDAAASQSKQRTPKNLSFAGQTITNTYSVG-LNASWEIDFFGRIQSLKDQALAQYLATAQ 190 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 A+++++S++ Y+ + + + L +++ ++ L+F G S+L L + Sbjct: 191 ARKAAEISLVSQVATQYMTVLELDDLLKVTQNTLKTSQESYRIAKLQFDNGTGSELDLRQ 250 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHN---ISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 + ++ +++ L++ R+ + L+G P + L N NL I Sbjct: 251 SQTVVEQAQAN---LQQQMRLRAQADNALVLLIGEPLPDDLPPGMTLDNQ---NLLTDIP 304 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---- 320 G+P+DL+ RPDI E+ L + A IG A++ +P +SL GS T S G Sbjct: 305 AGLPSDLLTRRPDIMEAEENLLAANANIGAARAAFFPKVSLTGSFG-TLSPSLGGLFKPG 363 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + WSF P + LPIF+ G+ +N+ A + Q T+++ + +A ++V +AL + Sbjct: 364 SAAWSFAPSITLPIFEGGQNLANLDLANIQKKVQIATYEKAIQSAFRDVADALAARGTYD 423 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + + L+ ++ + LS + Y G S L +L + + L A+ + ++ V Sbjct: 424 QQIQALERNTFAEQRRLDLSNLRYTNGVDSYLTVLTAQTDLYSSQQLLVTARMERLQNLV 483 Query: 441 DLYIAIGSGY 450 LY +G G+ Sbjct: 484 TLYQVLGGGW 493 >gi|27379432|ref|NP_770961.1| outer membrane channel lipoprotein [Bradyrhizobium japonicum USDA 110] gi|27352583|dbj|BAC49586.1| bll4321 [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/470 (22%), Positives = 211/470 (44%), Gaps = 37/470 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLL----PTQFSI--------GNSKNLINIDTLK--WWESFND 58 + LAGC VGP + P P + FS G ++ ++N + WW+ F Sbjct: 20 IALAGCAVGPNFEAPDAPPVSGYTAGGFSATKGADGPGGTAQRIVNGADVPAVWWQVFRS 79 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNS 116 + V+ A+ + + A + A+E + + L PS S + +P ++ Sbjct: 80 RQIEAFVREAIDNHPDLAAAQAALRQAREVAAADTSALMPSITGEGSATRSQVPLAQSGQ 139 Query: 117 TG----------QLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 TG + + D+FG + R IE+ LAN D Q++ L++ + ++ + I Sbjct: 140 TGPSSLYTLYKTSVPVSFTPDIFGGKARGIEADLANADYERFQLEATYLSLTANVVTTAI 199 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +I + + +D ++ + L +F GA + ++ +A++ + +P L+KS Sbjct: 200 SDASYAAQIRVTQEQIDGQRQLVALLEQQFALGAVANSDVLTQKAQLAQTLATLPPLQKS 259 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEK 283 N + + LG L + NL +P + + +P+ L+R RPDIR E Sbjct: 260 RAQNRNQLMAYLGR-----LPSQDRGEAVPLANLRLPRDLPVSVPSLLVRQRPDIRAAES 314 Query: 284 KLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ + A +G+A +++ P+++L GS AL + + WS + PIFD G + Sbjct: 315 QMHQASANVGVATANMLPNVTLSASGGSSALALSGLYGPQSAAWSVAASVTGPIFDAGSL 374 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +++ ++ TV+ A + V +AL +I D ++ A + +S+ +S Sbjct: 375 FHTKESKVAALEQKGAQYRSTVITAFQNVADALRAIQSDADLLKAQIEAEKTAAESLKMS 434 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ G + + +++ E+ ++ A+ V LY A+G G+ Sbjct: 435 QAQFKAGSTTFISVINAEQTLLTARINRVKAQASRYADTVSLYQALGGGW 484 >gi|148262607|ref|YP_001229313.1| RND efflux system outer membrane lipoprotein [Geobacter uraniireducens Rf4] gi|146396107|gb|ABQ24740.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter uraniireducens Rf4] Length = 510 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/474 (21%), Positives = 214/474 (45%), Gaps = 52/474 (10%) Query: 18 CTVGPEYTKPHMP--------LLPTQ-------------FSIGNSKNLINIDTLKWWESF 56 CTVGP++ P P LP Q F+IG +WW F Sbjct: 23 CTVGPDFRPPEAPRTDNYTSTALPAQTAAAEGNGGAAQRFAIGREI------PGQWWALF 76 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS----YASISHRFI--- 109 + +L++L+ A+ + T+ + A+EN+ + + S ++++ + Sbjct: 77 HSAALDRLISQAIADSPTLATIQATLRQAQENLRARTGTEYSPSLDANFSAVRQKISGVA 136 Query: 110 ---PNLKTNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 P+L NST + + +D+FG RR +E+ + +D Q++ A L + + + Sbjct: 137 FGQPDL-ANSTFSLFNASVKVSYALDIFGGGRRELEALRSQVDYQRYQLEGAYLALTANI 195 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + + + +I IL ++ +E+ +F G ++ ++ + + +P Sbjct: 196 VTTAVKEASLRAQIRATQNILANQEQQLEVVERQFQLGGVARTDVLAQRTRLAQTRATLP 255 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 LEK+ H ++ L G +P+ L + Q +P+++ P+ L+R RPDIR Sbjct: 256 PLEKALAQTRHLLAVLAGRFPSDAGLPEFDL--DGLQLPQELPVSL--PSALVRQRPDIR 311 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFD 336 E+ + + A++G+A ++LYP ++++GS+ + F + W G L P+ Sbjct: 312 AAEELMHAAGAQVGVATANLYPQITISGSLGSESGRITDLFGSGTSIWGLGAGLLQPLSH 371 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ + R A ++ + ++ TVL A++ V + L ++++D + + A + + Sbjct: 372 GGELTAKRRAAIAAYDQSAAQYRSTVLQALQNVADVLRALDDDARTLKAQADAETSARDT 431 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ ++ G + L +LD ER + ++ L A+ L+ A+G G+ Sbjct: 432 FDLTRQQFQLGAVNYLSLLDAERQYQQAQISLVQAQAARFADTAALFQALGGGW 485 >gi|209521564|ref|ZP_03270264.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498003|gb|EDZ98158.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 500 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/477 (23%), Positives = 215/477 (45%), Gaps = 47/477 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPL--------LPTQFS-----IGNSKNLINIDTL--KWWESF 56 V LAGC VGP+Y P P LP Q + G + + WW F Sbjct: 20 CVALAGCMVGPDYHSPPAPATDTFTATPLPDQTASAPGPAGLPQRFAPAQDIPAAWWTLF 79 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASI--SHRFIPNLK 113 + L+ L++ A+ + + A + A+EN + L PS A + + I + Sbjct: 80 HCEPLDALIREAITNSPNMAAAQAALRQARENYSAQAGGTLLPSVDAQLNATREKINGVT 139 Query: 114 TNSTGQLDS----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 G ++ +K+D+FG RR +E+ A +D + Q+ A L + + ++ Sbjct: 140 FGQPGLVEEFNLYNASVNVSYKLDVFGSARRELEALHAQIDYQHFQLQAAYLAISANIVT 199 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + + +I+ +I ++ + + +F G S+ +++ E + + +P L Sbjct: 200 AAVKEASVRAQINATERIAAEEEQQLSVLDQQFALGGVSRAAVLAQETLLAQTRATLPPL 259 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IP--INIGIPADLIRNRPDIR 279 + H ++ L G ++ +F +++ +P + + +P+ L+R RPDI Sbjct: 260 HQQLDQARHQLAVLAGKLPSD------TTVPDFTLDMFSLPDTLPVSLPSSLVRQRPDIL 313 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + L + A++G+A + +YP ++L+ G+ ALT +T WS G L P+F Sbjct: 314 AADATLHQASAQVGVATAAMYPQITLSASYGAEALTPAEVLRAGSTIWSIGAGLLQPVFH 373 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ + R AE++ ++ ++ETVL A + V + L ++ D + A S Sbjct: 374 GGQLNAQRRAAEAAYEQAGAQYRETVLLAFQNVADTLRALEHDATGLKAQTDASRAASDS 433 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 + L+ YR G S + +LD +R + V L+ A+ A Y D L+ A+G G+ Sbjct: 434 LELTRGQYRVGGVSYIALLDAQRQYQQTVVSLAQAQ---AARYADTAALFQALGGGW 487 >gi|53802503|ref|YP_112713.1| outer membrane efflux protein [Methylococcus capsulatus str. Bath] gi|53756264|gb|AAU90555.1| outer membrane efflux protein [Methylococcus capsulatus str. Bath] Length = 536 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 116/468 (24%), Positives = 216/468 (46%), Gaps = 33/468 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--------KNLINIDTLK--WWESFNDTS 60 I+ L+ C GP P P QF + +S + + L+ WW+ FND Sbjct: 25 LILHLSACVDGPA-VDLAPPYEPAQFVVPDSWHGSSPFVEAKPSDGELRPDWWKLFNDPV 83 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRF-IP 110 L +L + A+ N + A ER A++ ++ VR+ L P + S++ F P Sbjct: 84 LTQLEEQAMAANADLQAAAERFVQARDMMMKVRSRLIPQFGLEFGASDNRQSVNTLFRAP 143 Query: 111 NLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 N + G L S W+ D + R I + + + A+ +A+L++ +++ Y Sbjct: 144 NAPIEQSDYYSGGLAS-WEPDFWSAIRNRIRAEIYQAEQRAAEYGLARLSLQAEIATDYF 202 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + + S+ Q + YKK++E+ ++ +L + + E + S E+ ++ Sbjct: 203 TLRGYDAQDSVYKQSIAYYKKSLEIVDAQYKGAIVPQLDVARAEYLLHSTEAKELDIQGR 262 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ H I+ L+ F + P IP I PA L+ RPDI E+++ Sbjct: 263 RQVTEHAIAILVNKAPAAF--SIAPVDELPSPEFTIPQTI--PATLLERRPDIAQMERQM 318 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A + IGIA++ +P++ S + N N++WS+G + +P+F G ++ Sbjct: 319 AQANRAIGIARAAFFPNVVFKASGGYENGSMNLIALANSYWSYGASVSIPLFQGGLRRAQ 378 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++++ S+ +E ++ TVLNA +EVEN L+ N + AV+ K+ +L+M Sbjct: 379 LQQSWSAYRETEDKYRATVLNAFREVENGLSLTNRLSVAADRQDEAVKAALKTQNLTMEL 438 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + LD++ + T +D + K + K+ + L A+G G+N Sbjct: 439 YLGGLITSLDLIYAQINTLTARIDAVVLKTERLKNTIALIRALGGGWN 486 >gi|123440824|ref|YP_001004815.1| outer membrane efflux lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087785|emb|CAL10571.1| probable outer membrane efflux lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 468 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/458 (24%), Positives = 215/458 (46%), Gaps = 35/458 (7%) Query: 16 AGC-TVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 AGC ++ P+Y +P P+ T +S +S +I W E+ + L +++ +AL N Sbjct: 15 AGCISLDPDYQRPAAPVPATLPYSAASSGTAADI---PWQETVTEPKLRQVITLALGSNR 71 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD------------ 121 + QA I AA+ RA P+ A + +L S G + Sbjct: 72 DLRQAIADIEAARAQYGVQRAAQMPTVNAGVEGSRGRSLSDTSDGNNNTAISQSYGAEIS 131 Query: 122 -SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIA 177 S +++DLFG++R + S A ++ A + AK + +I+ +++ + ++ +A Sbjct: 132 VSAFELDLFGKKRSL--SRAEFETYLATEEAAKTTRITLIADTATAWVTLAADQNQLLLA 189 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L+ ++++L+ L+ G S++ +V +E +S +D+ + + + + + L+ Sbjct: 190 EETLNSAAQSLKLAQLRQKNGVASRIDVVAMETLYQSARADVAQYKTTVAQDKNALDLLV 249 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P L + P + + +G+ +D++ NRPD+ E KL + A IG A++ Sbjct: 250 GQPVPTNLLPTAAAT---LPQVIKAVPVGLSSDVLLNRPDVLAAEHKLKSANANIGAARA 306 Query: 298 DLYPSLSLN-----GSIAL-THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +PS++L GS AL T G WSF P + LPIFD G ++ + +++ Sbjct: 307 AFFPSVTLTASGGVGSSALATLLREGAGI---WSFAPAITLPIFDGGANQAALDYSQAQK 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ + A KEV +AL ++ + Q V ++S L+ Y+QG + Sbjct: 364 NGYIAAYEKAIQTAFKEVADALARKTTIQEQLAAQQAYVAAAQESFELAQKRYKQGIDTY 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R + L ++ A + + LY +G G Sbjct: 424 LNMLDAQRTLYSAQASLITVQQTQANNMITLYKVLGGG 461 >gi|213970395|ref|ZP_03398524.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] gi|213924866|gb|EEB58432.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] Length = 258 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 138/255 (54%), Gaps = 8/255 (3%) Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY 260 +L +V+ +A + ++E+ +P L+ + I+TLLG P T + S + P + Sbjct: 6 ELDVVRADARLAAVEATVPQLQAEQARQRNRIATLLGERPDTLSVDL----SPSKLPAIA 61 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPG 319 + IG ++RNRPDIR E++LA S A+IG+A +DL+P +SL+G + T S G Sbjct: 62 KALPIGDATQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSLSGFLGYTAGRGSQIG 121 Query: 320 YNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + WS GP + FD G +++ IR A++ A+ +++ VL A++E ENA + + Sbjct: 122 SSAARAWSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYD 181 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + ++ + L + + + L+ + YR+G L +LD ER E + A+ +L + Sbjct: 182 KRQQRLVALMRQSDASRSAARLASVQYREGTADFLVLLDAERERLAAEDSQAQAEIELYR 241 Query: 438 SYVDLYIAIGSGYNP 452 V +Y A+G G+ P Sbjct: 242 GIVAIYKALGGGWQP 256 >gi|53718454|ref|YP_107440.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|52208868|emb|CAH34807.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] Length = 514 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPCLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|284047653|ref|YP_003397992.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidaminococcus fermentans DSM 20731] gi|283951874|gb|ADB46677.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidaminococcus fermentans DSM 20731] Length = 509 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/429 (22%), Positives = 197/429 (45%), Gaps = 32/429 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASI-S 105 WW++F D L+ L+ ++L+ N + A R+ A+ + + + P +Y + Sbjct: 68 WWKTFQDPKLDALIDLSLKNNRDLQAAQARVEEARAQLGISKGEALPWLNLGGTYGRYEA 127 Query: 106 HRFI----------------PNLKTNSTG-QLDSDWKIDLFGQRRHIESSLA-NLDSAYA 147 R I P+ ++ G +D+ W+ D FG+ + + S A NL + +A Sbjct: 128 PRGINDKISGMSPYPGVINPPDRNSSVAGLGIDASWEPDFFGRLKARKQSAAHNLAAQHA 187 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + + + ++ +Y+ R ++ + + + L + +L + G S L Sbjct: 188 ALYSTWVTLSAETALNYVSLRTLQQDLDLLERHAALEGEKADLLQTNYQAGLISAYPLEA 247 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIG 266 + + ++ ++IP ++ + + +S L G + ++ + P LY Sbjct: 248 MRTQEQNTRAEIPRTRQAIQETLTRLSILTGTEPGQLNDFLDPEDLPEIDPELY----HA 303 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTH 323 IPA+L+R RPDIR E++L +A+ A+++L P +L G I L N F Sbjct: 304 IPANLMRQRPDIRAAEERLEAQIARTKEARAELKPRFTLGGFLGLITLGGGNLFGSGARS 363 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 ++ P P+F G+++ N++ ++ A+E ++ TVL A EV++A+T I ++K+ Sbjct: 364 FAIAPSFTFPLFHGGQLRQNVKLQDARAREYQAQYENTVLKAAGEVQDAMTGIVQEKERK 423 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 KL V+ + + L+ ++ G +LD ER ++ + ++ Q + LY Sbjct: 424 DKLSAGVDNAQGAFDLAENRFQAGLSDYQPVLDSERTLLTMKRQENRSRGQELADLIHLY 483 Query: 444 IAIGSGYNP 452 A+G G+ P Sbjct: 484 KALGGGWKP 492 >gi|134283507|ref|ZP_01770207.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 305] gi|134245256|gb|EBA45350.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 305] Length = 552 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 59 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 118 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 119 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 178 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 179 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 238 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 239 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 298 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 299 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 355 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 356 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 415 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 416 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 475 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 476 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 516 >gi|311103777|ref|YP_003976630.1| multidrug efflux system lipoprotein 1 [Achromobacter xylosoxidans A8] gi|310758466|gb|ADP13915.1| multidrug efflux system lipoprotein 1 [Achromobacter xylosoxidans A8] Length = 507 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 119/482 (24%), Positives = 227/482 (47%), Gaps = 62/482 (12%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGN--------SKNLINIDTLKWWESFNDTSLN 62 LL C VGP+Y +P + + T + G ++ L + WW+ ++D +LN Sbjct: 22 LCALLGACAVGPDYQRPALDV-GTAYKEGQGEVEGWKPARPLDQAERGAWWQVYDDATLN 80 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------------H 106 LV+ N T+ QA A + RA FP+ A Sbjct: 81 GLVERLNASNQTVAQAEANYRQALGLVRGARAGFFPTVGAGAGMTRSGSGGGQNGSTSSS 140 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + + TG + W++DL+G+ RR +ESS A+ ++ A + +L+ + L+ +Y+ Sbjct: 141 GSNVSNQYSLTGSVS--WEVDLWGRVRRSVESSEASAAASLADLGATRLSAQAALVQAYL 198 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R E+ + + Y+K+++L+ ++ G + + +++S + L+ Sbjct: 199 QLRVLDEQKRLLDATVAAYEKSLQLTQNRYAVGVAGQADVAVARTQVESTRAQSIDLDWQ 258 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNRPDIRYQ 281 H I+ L+G ++F + P ++ +P I +G+P++L+ RPD+ Sbjct: 259 RGQLEHAIAVLMGQAPSQF---------SLPPTVFALQLPQIPVGLPSELLERRPDVAAA 309 Query: 282 EKKLADSVAKIGIAKSDLYPSLSL-------NGSIA--LTHDNSFPGYNTHWSFGPKLYL 332 E++ A + A+IG+A++ +PSL+L NG A LT F WS GP L L Sbjct: 310 ERRAAAANAQIGVAQAAWFPSLTLSADGGFRNGQFAELLTAPARF------WSLGPALAL 363 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAV 390 IFD G ++ + +A +S Q +++ L ++EVE+ L + E++++V + A+ Sbjct: 364 TIFDGGAREAQVEQARASYDAQAAAYRQAALTGLREVEDYLIQLRVMENEQVVQR--RAL 421 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSG 449 E ++S+ L+ Y+ G L + ++ E + LS+ + A S V+L +A+G G Sbjct: 422 ESARESLRLTQNQYKAGLVDYLSVAVVDATALNSERNALSLLGNRFAAS-VNLIVALGGG 480 Query: 450 YN 451 + Sbjct: 481 WE 482 >gi|70731483|ref|YP_261224.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68345782|gb|AAY93388.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 492 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 119/470 (25%), Positives = 215/470 (45%), Gaps = 44/470 (9%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGCT+GPE +P +P S ++ +D +WW+ + D LN V+ AL Sbjct: 11 LCALLAGCTLGPE--RPPGSTVPLPVSHLDATAEQGLD--QWWQLYRDPGLNAAVQEALS 66 Query: 71 QNLTILQATERINAAKENILSVRADLF-------PSS-------YASISHRFIPNLKTNS 116 QN + R+ AA N+L RA L PS+ Y S + + +S Sbjct: 67 QNRDL-----RMAAA--NLLQARALLRETDTLRQPSTQVTARAGYGSTADDQLEAALQDS 119 Query: 117 ----TGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--SKLIPSYI 165 TG LD W+ DLFG R H + A D+ A+ L V+ ++ +++ Sbjct: 120 QHIRTGSRYGVGLDVQWEADLFG-RLHGLADAARADAEAARAAEDGLRVVVAAETTRAWL 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 A + +R+ +A + L L ++ LS + + GA L +V+ E + +++ +P L+ Sbjct: 179 QACSYGQRLQVAGESLALVEQGRALSAMLYQAGAAVTLDVVRAEGLVGQVQASLPPLQAG 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ LLG P + ++ + P L P+ ++R RPD+ E++L Sbjct: 239 RQRALAELAVLLGRPPGDA--PAAAKACHQAPRLGSPMPQSDALAMLRRRPDVSQAERRL 296 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIK 341 A + A+IG+A++DLYP +SL + T + G++ W GP L + + + Sbjct: 297 AAATARIGVARADLYPRVSLGAGV-FTSAHHPAGFDDRDASVWQLGPLLSWSLPNLNAAR 355 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + I +A + + ++L A+KE + AL+ + L A E +++ L+ Sbjct: 356 ARIAQASAGESAALADFDRSILAALKEQQQALSDYQAALQRQQALHLAAERDHQALRLAG 415 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + LD LD +R + + A + + V ++ A+G G+ Sbjct: 416 LARAAGASTALDYLDAQRTDVRTRAAAAQADAAVIDTQVLVFKALGGGWR 465 >gi|167578914|ref|ZP_02371788.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 510 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 51/472 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D +L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKTAEPADDAHRGEWWRVFGDPALDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T G + ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRALGTVS--YEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRL 209 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + ++L ++ ++L +F++G S+L + + + E+ + ++D + + + Sbjct: 210 DSDQDLYRRTVELREEALKLVQRRFSEGDISELDVSRAKNELATAQADSVGVARRRAASE 269 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLA 286 H ++ LLG +F +F+ +P+ + G+P+ L+ RPDI E+ + Sbjct: 270 HALAILLGKAPADF---------SFKETPIVPVAVRVPAGLPSALLERRPDIAAAERAMM 320 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGK 339 + A+IG+AKS +P L + GS A T N F + + GP L LPIFD G+ Sbjct: 321 AANARIGLAKSAYFPKLDITGSFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGR 380 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + +A + E+ +++ VL A +EVE+ L + + AV +++ L Sbjct: 381 RSAGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKL 440 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S Y++G S L+++D ER+ + ++ + A S V+L A+G G+ Sbjct: 441 SRTQYQEGAVSYLEVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|170724205|ref|YP_001751893.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169762208|gb|ACA75524.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 472 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/467 (23%), Positives = 212/467 (45%), Gaps = 28/467 (5%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLK-WWESFNDTS 60 I + F + L C VGP+Y P + G ++ ++++ + WW+ + D Sbjct: 5 ILAGFCLSLGACMMVGPDYEVPKDAAVQRSDLNGPLRQDAASVVSAPVPEDWWQLYQDQR 64 Query: 61 LNKLVKIALQQNLTI-------------LQATERINAAKENILSVRADLFPSSYASISHR 107 LN+LV+ AL N + ++ + I + L S A + Sbjct: 65 LNELVRQALSANTELRVAAANIAKARAQVEVAQSQGGFNGGIKAGAQRLQESGEAFLLTE 124 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +P + + + ++ DL+G +R E++ AN D+ A D A++ +++ ++ +Y Sbjct: 125 KVP-VANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQ 183 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 E IA + L L +++++L+ G + + + + + KS+ +++P + Sbjct: 184 VCSANEEYHIARESLGLQQQSVQLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAER 243 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ ++ LL P + + + Q N +P+ G A L++ RPD+R E++LA Sbjct: 244 ETGLYTLAALLAKPVGQLPAGTAECAELPQLNQLLPVGDG--AALLKRRPDVRQAERQLA 301 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S A IG+A LYP +S+ G+I + + P N W FGP++ I G ++ Sbjct: 302 ASTANIGVATGALYPDISIGAQVGTIGILENLGDPATN-RWGFGPQISWSIPTNG-TRAR 359 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 IR AE+S Q + VLNAI+E + L + L A + K++ + Sbjct: 360 IRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRY 419 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ GR S L L R + L+ A Q+A + +++A+G G+ Sbjct: 420 YQAGRESFLADLQATRTYTDMRAQLAAANSQVAMGQIGVFLALGGGW 466 >gi|323528450|ref|YP_004230602.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385452|gb|ADX57542.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 533 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/429 (24%), Positives = 203/429 (47%), Gaps = 39/429 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 +WW+ F D L+ L + A N + A R+ A+ + R+D FP Sbjct: 82 QWWKIFGDPQLDALEEQAAAANQDLKAAAARVQQARAVTRAARSDWFPKFDAGFGPTRER 141 Query: 102 ASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 AS + + P+ +TG Q+ + ++ DLFG+ ++ +S A+ + A +L+ Sbjct: 142 ASAASQLQPDSVGGTTGTIWRAQVGASYEADLFGRVGSNVNASRADEQQSEALFRSVQLS 201 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y R + + + L + ++L +F +G S+L + + E+ S Sbjct: 202 LQADVAQNYFQLRELDADQDLYRRTVALREDTLKLIERRFKEGDISELDVSRARNELASA 261 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADL 271 +D + + + H+++ LLG P EF +F P+ + G+P+ L Sbjct: 262 RADAVGVARQRAASEHSLAILLGKPPAEF---------SFAEAPLTPVTVRVPPGLPSAL 312 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----F 326 + RPD+ E+ +A + A++G+AKS +P L + G A ++++ G WS Sbjct: 313 LERRPDVSAAERAMAAANARVGLAKSAFFPKLDITG--AFGYESATLGDLFMWSSRAFIL 370 Query: 327 GP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 GP L +PIFD G+ K+N+ +A + E +++ VL A +EVE+ L + Sbjct: 371 GPLAGTALTVPIFDGGRRKANLAQARARYDEDVAQYRQQVLVAFREVEDNLADLRLLDDQ 430 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + +AV+ +++ LS Y +G S LD++D ER ++ S + A + V+L Sbjct: 431 MREQNNAVQASQRAARLSRTQYTEGAVSYLDVIDGERQVLSTQLQASHLQGTQAVATVNL 490 Query: 443 YIAIGSGYN 451 A+G G+ Sbjct: 491 IRALGGGWG 499 >gi|307295671|ref|ZP_07575504.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306878327|gb|EFN09548.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 476 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 214/464 (46%), Gaps = 35/464 (7%) Query: 18 CTVGPEYTKPHM--PLLP-TQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQNL 73 CT GP+Y P P P QF+ + W + ND L+ L AL N Sbjct: 16 CTTGPDYRGPETARPATPGAQFARASGDTGPQAPAAAAWWTALNDPVLDTLETRALAANP 75 Query: 74 TILQATERINAAKENILSVRADLFPSSYASI--SHRFIPNLKTNSTGQ------------ 119 + A R+ A+ ++ S RA+ PS+ AS H +P L N +G Sbjct: 76 GVAAAEARMRQARASLRSERANALPSTNASALYVHATVPGLDLNDSGDSDQSGGGSESLN 135 Query: 120 -----LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 D+ W+ DL+G +RR +E++ A LD+A A V A++++ +++ +Y+ R ++R Sbjct: 136 FYNLGFDASWEADLWGGKRRGVEAARAQLDAAQADVADAQVSLTAEIAQAYVHLRDRQQR 195 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE--AEIKSIESDIPTLEKSFRMNVH 231 I++A L ++ + L+ + QG S L + + AE E+ +N Sbjct: 196 IALARDALARQREMLRLTEQRHAQGTASALDVERQRHLAEQADAALPPLAAERDGYLNA- 254 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++TL G + S P + +G PA+L++ RPD+R E++ A + AK Sbjct: 255 -LATLAGEAPGALDGMLAAPSKAIVPLPPAQVAVGDPAELLKRRPDVRAAERRFAAATAK 313 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPG----YNTHWSFG-PKLYLPIFDKGKIKSNIRR 346 IG+A++ +PS+S G I + + PG ++ + P+L D G+ + + + Sbjct: 314 IGVAEAARFPSISFMGLIGIG--GTSPGDLVDFDKLAAIAMPRLSWSFLDFGRNAARVGQ 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 AE + E +++ VL+A+++ E+AL+ + V + ++ +L+ + Sbjct: 372 AEGARDEAAAHYRQAVLDALRDGEDALSRFGNGRLSVASAARSKASADRTAALTRQRFEA 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + + +LD ER + LS A + Y+ L A+G G+ Sbjct: 432 GAATRIQLLDAERQSLSAAQSLSQATAAMTADYIALQKALGLGW 475 >gi|53725078|ref|YP_102139.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|121601280|ref|YP_991959.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|238562741|ref|ZP_00439973.2| outer membrane efflux protein OprB [Burkholderia mallei GB8 horse 4] gi|251767802|ref|ZP_02268462.2| outer membrane efflux protein OprB [Burkholderia mallei PRL-20] gi|254177075|ref|ZP_04883732.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254203821|ref|ZP_04910181.1| outer membrane efflux protein OprB [Burkholderia mallei FMH] gi|254208799|ref|ZP_04915147.1| outer membrane efflux protein OprB [Burkholderia mallei JHU] gi|52428501|gb|AAU49094.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|121230090|gb|ABM52608.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|147745333|gb|EDK52413.1| outer membrane efflux protein OprB [Burkholderia mallei FMH] gi|147750675|gb|EDK57744.1| outer membrane efflux protein OprB [Burkholderia mallei JHU] gi|160698116|gb|EDP88086.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|238522063|gb|EEP85510.1| outer membrane efflux protein OprB [Burkholderia mallei GB8 horse 4] gi|243061663|gb|EES43849.1| outer membrane efflux protein OprB [Burkholderia mallei PRL-20] Length = 514 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--ADLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASTTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|329910032|ref|ZP_08275209.1| RND efflux system, outer membrane lipoprotein, NodT family [Oxalobacteraceae bacterium IMCC9480] gi|327546294|gb|EGF31321.1| RND efflux system, outer membrane lipoprotein, NodT family [Oxalobacteraceae bacterium IMCC9480] Length = 490 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 120/461 (26%), Positives = 207/461 (44%), Gaps = 29/461 (6%) Query: 8 FSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTLKWWESFNDTSLN 62 F L +L L GC + P + + P G S L + D +WW+ D L Sbjct: 20 FKLCALLWLGGCAIAPPPARVDAGVAP-----GWSAPLPHQGSLTDLTRWWQQQGDPLLV 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFIPNLKTNS 116 +L+ + ++ A RI+ A+ +S A L P+ A+ S IP L T Sbjct: 75 QLIDAGQAVSPSVASAAARISQARAVQVSASAALVPALNATASGSRNSAQPGIP-LSTTV 133 Query: 117 TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L + W+ID+FG RR + S+ A LD A A A+++V + + Y R + + Sbjct: 134 QGALQASWEIDVFGARRFAQDSARARLDGAQAGWHDARVSVAADIANQYYGLRACQRLLE 193 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + LS L T G T+ + A + + + + + Sbjct: 194 VTRADAASRTETARLSQLSATAGFTAPATAALARASAAEASGRVTQQQAQCDIGIKTLVA 253 Query: 236 LLGYPATEFLHYMQKQSNNFQPN-LYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIG 293 L + +++Q + P L+ PI I +PA +R RPD+ E+++A + A +G Sbjct: 254 LTAVAEPD----LRQQLGDLTPAALFTPIAITSLPAATLRQRPDVFNAEREVAAASAAVG 309 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGP-KLYLPIFDKGKIKSNIRRAES 349 A++ YP L+L GS+ + G T W+ GP + LP+FD G +NI A + Sbjct: 310 NAQAQRYPRLTLGGSVGAGAFRAV-GVTTEAPTWAIGPLAVSLPLFDAGTRVANIDAARA 368 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 S E + ++ V A++EVE AL +++ + AV+ ++ S + + YR G Sbjct: 369 SYDEAVVLYRARVRQAVREVEEALVNLDSTARRSDDAARAVDGYRLSFNGTENRYRSGLA 428 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SL+++ D R E++ ++Q +++ LY A G G+ Sbjct: 429 SLVELEDARRFRLAAELNQVALQQQRNAAWIALYRAAGGGW 469 >gi|21243569|ref|NP_643151.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109137|gb|AAM37687.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 503 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 114/485 (23%), Positives = 216/485 (44%), Gaps = 36/485 (7%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFS----------------IGNSK 42 M +R V +L+GCT+ P YT+P P+ P QF+ GN+ Sbjct: 1 MTTIRTTLCALGVASVLSGCTLMPRYTRPDAPV-PAQFAGTDVSVAPPAAAATADTGNNA 59 Query: 43 NLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--- 99 + I + W + F D +L +++ +AL N + A I A+ RA L P+ Sbjct: 60 DTAYIADIGWRQVFTDPTLQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIDG 119 Query: 100 -----SYASISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQV 149 + + S IP +T S S +++DLFG+ R + E +L S Sbjct: 120 TGTANNARTPSELAIPGQPQVFRTYSANIGISAYELDLFGRVRSLKEQALQQFLSTAEAR 179 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +++++++ +Y+ ++ + +A L + L F G S+L+L + + Sbjct: 180 RSTHISLVAEVATAYLTLAADQQLLQLAQSTLTSQSDSYRLQQRSFELGVASQLTLRQAQ 239 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIP 268 +++ D+ + + + L+G E L + + + + N+ + G+P Sbjct: 240 TTVETARVDVERYTAQVAQDRNALVLLVGTQVPVELLPHALPDNASVEGNVLASVPAGLP 299 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWS 325 + L++ RPDI E+ L + A IG A++ +PS+SL S + + F WS Sbjct: 300 SQLLQRRPDILEAERNLRAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWS 359 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 F P L LPIF+ G+ ++N+ A+++ + +++++ +A +EV +AL + + + Sbjct: 360 FVPTLTLPIFNAGRNRANLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQA 419 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q V+ S LS + +G S L LD +R+ + L + + V Y A Sbjct: 420 QQALVDATADSYRLSQARFERGIDSYLQALDAQRSLYSAQQTLINTQLSRFTNLVTFYKA 479 Query: 446 IGSGY 450 +G G+ Sbjct: 480 MGGGW 484 >gi|152989092|ref|YP_001346276.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150964250|gb|ABR86275.1| outer membrane protein [Pseudomonas aeruginosa PA7] Length = 480 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/453 (23%), Positives = 204/453 (45%), Gaps = 22/453 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQQNL 73 LA C+VGP+Y +P P T+ + ++ WW F+D L +LV AL +N Sbjct: 19 LAACSVGPDYQRPQTP--ATRIASQHAGEFSAERRQAPWWSFFDDPQLVRLVDQALARNH 76 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------------LD 121 I +A + +A+ D P + + + + G+ D Sbjct: 77 DIREARANLRSARALYDERWLDQLPQVTSQAGYNRSLAQQADYDGEPRRRLSESYRAGFD 136 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+IDLFG+ H+ +++LA ++A A +++A+L++ + +Y + + ++ R+ +A Sbjct: 137 AQWEIDLFGRLGHLSDAALARAEAASADLELARLSIAADTARAYFEVQGYQRRLDVARAQ 196 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + ++ +EL+ G+ + +A + E+ +P L + + + L G Sbjct: 197 VRSWRDTLELTRSSLQLGSGLPEEVENAQANLSRSEAAVPPLTSALEAARYRLDVLRGEA 256 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + NL +G LI RPD+ E++LA S +G A ++LY Sbjct: 257 PGSGAPVLDGGAAPLAKNL----PLGDVDYLILQRPDVISAERQLAASSEDVGAATAELY 312 Query: 301 PSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 P L L G I + + P + P F G +++ +R AE+ + + Sbjct: 313 PRLDLGGFIGFFALRSGDLGSASRAFELAPAVSWPAFRLGNVRARLRAAEAQSDAALARY 372 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q T+L A ++V NAL + E ++ + L + ++ ++ YR G S L +L+ + Sbjct: 373 QRTLLLAQEDVGNALNQLAEHQRRLVALVRSASHAGNALEIANERYRAGAGSYLAVLENQ 432 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 RA ++ +L+ A+ + + LY A+G G + Sbjct: 433 RALYQIREELAQAETASFVNVIALYKALGWGTD 465 >gi|152984401|ref|YP_001348631.1| outer membrane efflux protein OprA [Pseudomonas aeruginosa PA7] gi|150959559|gb|ABR81584.1| outer membrane efflux protein OprA [Pseudomonas aeruginosa PA7] Length = 467 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/452 (25%), Positives = 222/452 (49%), Gaps = 27/452 (5%) Query: 19 TVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNLTIL 76 ++ P Y +P P+ PT + ++ S+ + L W + F D L +++ AL+ N + Sbjct: 22 SLAPRYQRPEAPI-PTAYPAVPASQQAGDRARLDDWQQQFTDPVLRQMIGQALEHNRNLR 80 Query: 77 QATERINAAKENILSVRA-DLFPSSYASISH-RFIPNLKTNSTGQLDSDWKI-------- 126 A RI A+ + V+A + P+ AS + R +T GQ++ +++ Sbjct: 81 VAALRIEEAR-ALYGVQASERLPTLEASGRYERERMRGETREAGQVEQRYRVAAGISAFE 139 Query: 127 -DLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 D FG+ +++ +++LA+ L S AQ A++ +I+++ Y+ R + +A + L Sbjct: 140 LDFFGRVKNLGDAALADYLASEEAQRS-ARIALIAEVAGGYVQERALYAQQRLAERTLHA 198 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + L ++ G ++++ L E ++S + L + V + LLG + Sbjct: 199 RENGLALVRKRYAAGMSTRIDLRSEEMLVESARATHAALVRERSQAVSGLQLLLG----D 254 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 F Q + + P+ G+P++L+ RPDIR E++L + A IG A++ +PSL Sbjct: 255 FTGDWQDSQLDLEHLQLQPLPAGLPSELLARRPDIRQAEQQLRAANANIGAARAAFFPSL 314 Query: 304 SLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+ GS + F G + W+F P++ LPIFD G+ ++N+ AE ++E Sbjct: 315 RLSTDLGSASSGLHGLFRGGSRVWTFSPQMTLPIFDGGRNRANLDLAEVRKDIAVNRYEE 374 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAV-ELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++ A +EV +AL S + ++ + Q AV + ++ + L Y +G + L++LD +R Sbjct: 375 SIQVAFREVADAL-SAGDQLELQLRAQRAVRDADRERLQLVRKRYAKGVANYLEMLDAQR 433 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E L + + V LY A+G G++ Sbjct: 434 SLFDSEQQLIHLRGLRLNNGVALYRALGGGWS 465 >gi|404773|gb|AAA74435.1| outer membrane protein [Pseudomonas aeruginosa] Length = 477 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 209/476 (43%), Gaps = 43/476 (9%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFN 57 R+ SL + V+L+GC++ P+Y +P P+ P + G + + + W E F Sbjct: 3 RSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFR 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L +L+ +AL+ N + A + A + RADLFP + R +L T Sbjct: 63 DPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLST 122 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSY 164 + + S W++DLFG+ R + A Q A+ +++ + +Y Sbjct: 123 TGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + ++ + L Y+K+ +L+ + G S L L + + ++E TL + Sbjct: 183 LTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQ 239 Query: 225 SFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 R+ + + L+ G PA Q L + G+P+DL++ RPDI Sbjct: 240 YTRLVAQDQNALVLLLGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDIL 293 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +PS+SL G+++ F + W F P + LPIF Sbjct: 294 EAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFT 353 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++++ A+ +++ + A +EV + L + +LQ +L K S Sbjct: 354 AGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKAS 410 Query: 397 ---MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ YR G + L +LD +R+ + L + S V+LY A+ G Sbjct: 411 DEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALWGG 466 >gi|209543113|ref|YP_002275342.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209530790|gb|ACI50727.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 506 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 106/471 (22%), Positives = 206/471 (43%), Gaps = 36/471 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN----LINIDTLK---------WW 53 I + + L GCTVGP Y PL P + G +++ + + ++ K WW Sbjct: 25 ILVVLMPGLTGCTVGPTY---KAPLPPDAATFGETRSETATVASANSTKQAAGKPGSDWW 81 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR------ 107 F L+ LV AL+ + +I A + A E + + + L P A+ + Sbjct: 82 RLFRSPRLDALVTEALRNSWSIQAAQANLRKAAEGLHAAQGSLMPQIDATGTEGRQEYGA 141 Query: 108 --------FIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 P S G LD + D+FG R ++ + A D+ + D+ L VI Sbjct: 142 ALFGPWAWTFPAFSAYSAG-LDVSYDPDIFGGNHRLVQMAGAQKDAERERRDVTMLLVIG 200 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + + +A ++I++ ++D ++ ++L+ L + G +L +V EA++ +S Sbjct: 201 DTVLTAFEAASTADQIAVIRGVIDTDRETLQLATLAWQAGRRPRLDVVTAEAQLAHDQSL 260 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P L + ++ L G+ + ++ P+ I + +P++L+ RPDI Sbjct: 261 LPPLINAHEAARTTLAVLTGHSPANWTAPTLALADFSLPS---DIPVVVPSELVHARPDI 317 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E + + A+IG+ +DLYP L+L+ ++A P W LP+F G Sbjct: 318 IGAEAMMRAANAEIGVRTADLYPRLTLSAAVAAEGLMGGPA-GAAWRLIGGAALPLFHGG 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + ++AE + + +Q V+N +EV + L + + + AV +++ Sbjct: 377 TLMARKKQAEEDYRIAFDHYQLVVINGFREVADGLNGLKNASTELDNQRQAVTSADDALT 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LS Y+ GR ++L ++ R + A+ ++ + V + +A G G Sbjct: 437 LSQAGYQAGRETILQPINARRLFLLARQNTVRAQTEMFRQTVRIMVATGGG 487 >gi|167621140|ref|ZP_02389771.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 456 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/469 (23%), Positives = 208/469 (44%), Gaps = 50/469 (10%) Query: 17 GCTVGPEYTKPHMPL---LPTQ------------FSIGNSKNLINIDTLKWWESFNDTSL 61 GCT+ P Y +P P+ PT N + ++I W E F D L Sbjct: 1 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAAAGARSANGQAAVDI---GWREFFVDPRL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIP 110 +L++IAL+ N + + + A++ RA LFP+ + A +S P Sbjct: 58 QRLIEIALKNNRDLRVSVLNVEASRAQYRITRAGLFPTLDGTGTGTIQRTPAGVSVTGQP 117 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 118 LISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLS 177 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + +L+ L+F G S+L L + + +++ ++ ++ Sbjct: 178 TDDLLQVTENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQA 237 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V+ + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + Sbjct: 238 VNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAAN 294 Query: 290 AKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +P +SL G+ T F WSF P + LPIF+ G+ +N+ Sbjct: 295 ANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGGQNIANLDL 354 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + +++ + +A +EV + L + + + L+ ++ LS + Y+ Sbjct: 355 AHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYKN 414 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGS 448 G S L +L + DL A++QL + VDLY A+G Sbjct: 415 GVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGG 456 >gi|292490961|ref|YP_003526400.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosococcus halophilus Nc4] gi|291579556|gb|ADE14013.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosococcus halophilus Nc4] Length = 494 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 119/462 (25%), Positives = 216/462 (46%), Gaps = 27/462 (5%) Query: 3 ILRAIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDT 59 +L I + +V+L C GP Y +P +P+ ++S G+S I +D WW +F D Sbjct: 36 LLWLIAGMGLVILPSCANLGGPAYQRPELPV-KKEWSRGSSTAETIRLD---WWTAFGDP 91 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 LN L++ A+ Q + + R A+ I RA P+ +ST Q Sbjct: 92 YLNSLIEKAIAQGIDLKILAARSEVAEVAIEQARAGALPTVNLGFGINTQKVTGQSSTTQ 151 Query: 120 LDS----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 ++ +W++D++G+ ++ +++ A + A L ++S + SY R F E+I Sbjct: 152 YNAASALNWELDIWGKFKKGVKAQTAAYKATEADWRAGYLTLVSNVATSYFQIRQFDEQI 211 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 L+ ++ + + +G + +++ +AEI +++ + L + + + ++ Sbjct: 212 QRQQAYLNQNEEILAIYESMHQEGLIPETQILQQKAEISRLKTGLLELNRLRTVTENALA 271 Query: 235 TLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 TLLG PA E Y+Q + I + G+PADL+ RPD+ E ++ + Sbjct: 272 TLLGIPAGELQVPRSYLQDSVD------IIGVPSGLPADLLSRRPDVIAAEYRILQAHEL 325 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAES 349 G AK PS++L T W+FG P + PIFD I + I+ +E+ Sbjct: 326 SGQAKLAKLPSITLTARGG-TASFELTDLMKMWTFGIMPSINFPIFDP-NINARIKVSEA 383 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL-QHAVELHKKSMSLSMINYRQGR 408 A+ ++ TV A +EVENALT++ K+ +L Q ++L S + +G Sbjct: 384 EAKVAAEEYRRTVFQAFEEVENALTNLASRKEQKKELEQQIIDLRIVSDQIQA-QLEEGL 442 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L + +I+R+ E+ + +Q+ S V LY A+G G+ Sbjct: 443 ISQLQVFEIQRSLLAAELAMLSNYQQILSSTVTLYKALGGGW 484 >gi|77458981|ref|YP_348487.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382984|gb|ABA74497.1| multidrug resistance outer membrane protein [Pseudomonas fluorescens Pf0-1] Length = 469 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 120/471 (25%), Positives = 211/471 (44%), Gaps = 40/471 (8%) Query: 8 FSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 FS ++ LLAGC++ P Y +P P+ ++ + K I+ L W D L +LV Sbjct: 6 FSTLVIAMLLAGCSLAPTYERPVAPV-ADNWAGESLKQGAPINQLAWQAFIVDPDLRRLV 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDS 122 ++AL N ++ Q I A+ RAD P AS S R +L ++ + S Sbjct: 65 EVALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQRLPSDLASDGRAGVAS 124 Query: 123 ---------DWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++++DLFG+ + + S LA ++A A A++ +I+++ +Y+ Sbjct: 125 QYQVGLSLPEYELDLFGRVKSLSDSALQEYLATEEAARA----AQIALIAEVSQAYLVHD 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + R+ + Q L + + L + + G + L + + +E E++ R Sbjct: 181 GAQRRLDLTQQTLSSREYSFALISQRRSSGTATAL---DYQEALGLVEQARAEQERNLRE 237 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + L+ T+ + + QP L I + LI RPDI E +L Sbjct: 238 KQQAFNALVLLLGTKDAGKVIPERLTTQPMLVQDIAPDTTSTLIERRPDILAAEHRLQAR 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P +SL GS + F G + WSF P L LP+FD G+ + + Sbjct: 298 NADIGAARAAFFPRISLTGSFGTSSAQMSGLFDGGSRSWSFVPNLSLPLFDAGRNSAGLS 357 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE+ ++ T+ A +EV +AL + + ++ + +++SL+ Y Sbjct: 358 LAEARKDSAVAAYEGTIQTAFREVADALAATDTLRREEAARRALANTSTETLSLAKARYE 417 Query: 406 QGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L LD +R TA +EV +RQ+A VDL+ ++G G++ Sbjct: 418 GGIDSHLRYLDAQRTSFVNETAFIEVS---TQRQIA--LVDLFRSLGGGWS 463 >gi|330877822|gb|EGH11971.1| outer membrane efflux protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966623|gb|EGH66883.1| outer membrane efflux protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 486 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 221/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P +T Sbjct: 62 DPALQQLIETALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPADQTQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQSAISSSYSATLGVSAYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVANVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARARLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTGLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILQAEHTLKAANANIGAARAAFFPSISLTASAGTSSTELSGLFKGGSGTWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++++ A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKSIQTAFQEVSDGLASRKTYDEQLQAQRDFVTANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|220924033|ref|YP_002499335.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium nodulans ORS 2060] gi|219948640|gb|ACL59032.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium nodulans ORS 2060] Length = 496 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/411 (23%), Positives = 195/411 (47%), Gaps = 26/411 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-------------NIDTLKWWESFNDTSLNK 63 GC VGP+Y++P + P F G ++ + D WW + D +L++ Sbjct: 20 GCLVGPDYSRPSVET-PLAFKEGGARATVMPGRNWRPARPADEADRGDWWRVYRDPALDR 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNL-KTNSTGQL 120 L+++ N + A A+ + RA LFP+ SIS + +T T Q Sbjct: 79 LIRLVDVDNQNLRAAVAAYRQARALVQEARAQLFPTVLGAPSISRSRSGGVERTTLTLQG 138 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W++DLFG+ RR IES +A+ ++ A++ +L ++L +Y R+ + Q Sbjct: 139 SASWELDLFGRIRRQIESDVASAQASAAEIAAVRLANQAELAAAYFQLRYQDSLQRLLDQ 198 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y++++ ++ ++ G ++ ++ + ++++ ++ + H I+ L+G Sbjct: 199 TVQAYQRSLAITENQYAAGVAARSDVITAQTQLQTTQAQAIAVGLQRATLEHAIAVLIGR 258 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P E + + +P +P+++ P+DL+ RPDI E+ + +IG+A + Sbjct: 259 PPAEV--SLPRIRLAARPPT-VPVSV--PSDLLERRPDIAQAERAVQAQSEQIGVAVAAF 313 Query: 300 YPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP+++L+ + + D N F NT WS +FD G + ++ A + Sbjct: 314 YPTITLSANGGIAGDPARNFFSAANTFWSVAANGSQVLFDGGARAAVLQAARAGYDADVA 373 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 T+++TVL A +EVEN L+ + AV+ ++++ +++ YR G Sbjct: 374 TYRQTVLTAFQEVENGLSGQRILARQAAAQDVAVQSSRRAVEIALNEYRAG 424 >gi|70728710|ref|YP_258459.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68343009|gb|AAY90615.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 486 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/471 (24%), Positives = 225/471 (47%), Gaps = 30/471 (6%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLK--WWESFN 57 +++ SL I + L+GC++ P+Y +P P+ QF G + K N+ + W + F+ Sbjct: 3 KSLLSLAITAIALSGCSLIPDYQRPEAPV-AAQFPQGPAYSPKEAANVAAAEQGWRQFFH 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ +L+ N + A I+A RADLFP S+ AS S + P + + Sbjct: 62 DPALQQLIQTSLENNRDLRVAALNIDAYAAQYQIQRADLFPAVSANASGSRQRTP-ARMS 120 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TG+ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 121 QTGEAGITSQYSATVGVSAYELDLFGRVRSLSEQALQTYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G S L L + +++ + Sbjct: 181 YMTWQADKELLKLTQDTLAAYEESYRLTSRSNEVGVASALDLSQSRTSVENARVQLARYT 240 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++++ LLG L Q S + +L G+P++L++ RPDI E Sbjct: 241 RQVAQDENSLTLLLGAAIPANLPKAQPLSADLLSDL----PAGLPSELLQRRPDILEAEY 296 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 KL + A IG A++ +PS+SL G+++ F G + W F P++ LPIF+ G + Sbjct: 297 KLKAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSL 356 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++++ ++ +++++ A +EV + L + + + + V ++ L+ Sbjct: 357 RASLDYSKIQKDITVAQYEKSIQTAFQEVSDGLAARQTYNQQLQAQRDFVNANQDYYRLA 416 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L LD +R+ + L + S V+LY A+G G++ Sbjct: 417 ERRYRIGVDSNLTFLDAQRSLFSAQQALITDRLSQLTSEVNLYKALGGGWS 467 >gi|237507825|ref|ZP_04520540.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] gi|235000030|gb|EEP49454.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] Length = 552 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 59 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 118 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 119 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 178 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 179 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 238 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 239 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 298 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 299 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 355 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 356 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 415 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 416 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 475 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 476 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 516 >gi|289628491|ref|ZP_06461445.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648233|ref|ZP_06479576.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868779|gb|EGH03488.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330888480|gb|EGH21141.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQAGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + E Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYE 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|288961655|ref|YP_003451965.1| multidrug resistance outer membrane protein [Azospirillum sp. B510] gi|288913935|dbj|BAI75421.1| multidrug resistance outer membrane protein [Azospirillum sp. B510] Length = 475 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/456 (23%), Positives = 204/456 (44%), Gaps = 31/456 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LLAGC++ P Y +P P+ P + + + W D L +L+ AL+ N Sbjct: 21 ALLAGCSLAPPYERPAAPI-PASYPAPVTLPGPPRNAAPWCARQPDPRLERLIAAALEHN 79 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------------GQL 120 + R+ A+ + S + S + R +L+ ST G Sbjct: 80 RDL-----RLAVARVAEARAQ-----SGFQSATRRPAVSLEATSTNPPQDNDSAQQLGLA 129 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S +++D F + +++ +++L L + A++++I+++ +Y+ R R +IA + Sbjct: 130 LSSYELDFFDKAKNLSDAALHELLATEQAQRTARVSLIAEVARAYVTERAADARATIARR 189 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + K + L + GA+S L + + + S E+D+ E + + ++ L GY Sbjct: 190 AIASRKAGVALLDRRLAAGASSPLEVQQARTLVASAEADLIEQELTRERAANQLALLTGY 249 Query: 240 PATEFLHYMQK----QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 + + P+ G+P++L+ RPDI E++L + A+IG A Sbjct: 250 SGGGAGGDDARTAPAFGTAAFAAGWGPLQPGLPSELLTKRPDIMAAEQRLMAANAQIGAA 309 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+ L L + + F + W F P++ +P+FD G+ ++N+ A++ Sbjct: 310 RAAFFPSIRLTTMAGLASNELHSLFRVGSGAWQFVPQISIPLFDGGRNQANLDLAKARES 369 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++ T+ A +EV +AL ++ + EL K +L+M Y G L Sbjct: 370 IAVVEYERTIQTAFREVADALAGQTMLERDAAARRTMRELEGKRHALTMKRYLAGAVGYL 429 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++LD ER + L A+R ++ V LY A+G Sbjct: 430 EVLDAERGLFAADQALIDAQRGRLENAVALYRALGG 465 >gi|295690919|ref|YP_003594612.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295432822|gb|ADG11994.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 467 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 121/466 (25%), Positives = 211/466 (45%), Gaps = 33/466 (7%) Query: 10 LFIVLLA-----GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 L ++LLA CT+ P+Y +P +P+ T + L W + D L Sbjct: 5 LTLILLASTAVSACTLAPKYERPVLPVAQTWSTPKAEPAGQVTAADLDWRQVLVDPRLQG 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQ-LD 121 +V +AL+QN + A I A+ RA+LFP+ ++S +R + TGQ ++ Sbjct: 65 VVDLALKQNRDLRVAVLNIEKARATYGVQRANLFPAIDGALSGNRSRTPAGVSQTGQAIE 124 Query: 122 SD----------WKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDAR 168 ++ +++DLFG+ R + L S +A + A+ +++I++ +++ Sbjct: 125 TETYSATIGFTAYELDLFGRVRSLNQQ--ALQSFFATEETARSTRISLIAETANAWLTLA 182 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++R+++A L ++++ L+ + G S L L E +S SDI T Sbjct: 183 ADQDRLALARNTLAAREESLALTRRQVDGGVGSLLDLRNAETLAESARSDIATYTAQVAQ 242 Query: 229 NVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + + L G PA E L Q ++ +L G+P+D++ RPD+ E L Sbjct: 243 DRNALVLLAGGEVPA-ELLPSGQVETAKILADL----PAGLPSDVLARRPDVLSAEHSLQ 297 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P +SL GS T ++ F WSF P++ LPIF G + Sbjct: 298 GANANIGAARAAFFPRISLTGSTGATSGDLNDLFKNGTGSWSFTPQISLPIFAGGANVAG 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++S T+++TV A +EV +AL+ + + V S LS Sbjct: 358 LDSAKASRDIAVATYEKTVQTAFREVSDALSVRQTVSDRLAAQERLVAAAADSERLSRQR 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S L +LD +R + L A+ A + V LY +G G Sbjct: 418 RDAGVDSALTLLDSQRTLYSAQQGLITARLDRATNLVTLYKTLGGG 463 >gi|257486450|ref|ZP_05640491.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987790|gb|EGH85893.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009937|gb|EGH89993.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQAGITSSYSASLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + E Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYE 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|217419053|ref|ZP_03450560.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 576] gi|217398357|gb|EEC38372.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 576] Length = 558 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 64 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 123 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 124 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 183 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 184 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 243 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 244 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 303 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 304 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 360 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 361 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 420 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 421 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 480 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 481 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 521 >gi|71736997|ref|YP_276145.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557550|gb|AAZ36761.1| outer membrane efflux lipoprotein, NodT family [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325502|gb|EFW81564.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. B076] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMATAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQAGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + E Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYE 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|226198324|ref|ZP_03793894.1| outer membrane efflux protein OprM [Burkholderia pseudomallei Pakistan 9] gi|225929608|gb|EEH25625.1| outer membrane efflux protein OprM [Burkholderia pseudomallei Pakistan 9] Length = 511 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|149186606|ref|ZP_01864918.1| putative outer membrane efflux protein OprN precursor [Erythrobacter sp. SD-21] gi|148829833|gb|EDL48272.1| putative outer membrane efflux protein OprN precursor [Erythrobacter sp. SD-21] Length = 495 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 75/480 (15%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLK-----WWESFNDTSLNKL 64 + LLAGC GP+Y P P L T + GN+ + ID WW D LN+L Sbjct: 1 MALLAGCMSGPDYAGP--PQLAT--AAGNAFVRAGPEIDPFAPIAGDWWTLLGDPVLNEL 56 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQ--- 119 AL N + A RI A+ ++ RA+ P+ A + IP L S Sbjct: 57 EARALVGNPGVAAARARIEQARASVRQERANRLPAVAAQATAVQANIPGLDIGSGPPPGS 116 Query: 120 -------------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 L+++W+ID G Q R +E+ A ++ A + AK+ + ++ Sbjct: 117 PGAPADTEEQDSLSVYNVGLNANWEIDFAGGQARRVEAINAQAAASVANAEDAKVQLAAE 176 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R + R+ + + DL ++ +EL++ ++TQGA + + AE++ ++S I Sbjct: 177 IARAYVSLREAQGRLELVQRERDLQQQILELTYQRYTQGALALFPVGNANAELELLKSQI 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIRNRP 276 + + ++ L G + Q+ + +P + +G PA LI RP Sbjct: 237 AEAQADIDVFKDTLAVLTGEAPGALDGLLAAQA-----EIPLPPERVAVGDPAALIARRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYL 332 D+R E+ LA + A+IG+A++ +P +S G + L D PG + + P+L Sbjct: 292 DVRAAERMLAAANARIGVAEAARFPKISFMGILGLGGSEPDDILDPGNLSAIAL-PRLQW 350 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH---- 388 + D G+ ++I +AES+ E + E VL A+++ E +L + + V L Sbjct: 351 NLLDFGRTAASIDQAESARDEAEARYLEVVLGALRDAEQSLARFGQQRANVAALAQISRQ 410 Query: 389 ---AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 A EL+++ + +I+ QG E++ SI KR+ A++ +D IA Sbjct: 411 ADTAAELNEQRRAAGVIS--QG-----------------ELNTSIRKREQARANLDRAIA 451 >gi|330973524|gb|EGH73590.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPQAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|320327210|gb|EFW83224.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMATAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQAGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + E Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYE 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|21672266|gb|AAM74473.1| outer membrane protein precursor OPRM [Aeromonas hydrophila] Length = 475 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 109/470 (23%), Positives = 224/470 (47%), Gaps = 31/470 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N+ + + +L + +LL GC++ P+Y +P +P Q + S W + F D + Sbjct: 6 NMTKTLIALSVTLLLGGCSMAPDYQRPELP----QGATWQSNQTGEAAVSSWRQQFLDPA 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNST 117 L +L+ AL+ N + A + A + RA P+ A+ S + +L + Sbjct: 62 LQQLIATALENNRDLRIAALNVEAYEARYRIQRAAQLPTLAANGSGTRQQGSDDLSSTGQ 121 Query: 118 GQLDSDW---------KIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYI 165 G + S + ++DLFG+ + ++ L++ Q++ + + +++ + +Y+ Sbjct: 122 GSISSQYGANIGITAYELDLFGRIQSLKDQ--ALETYLVQIETQRSTQIALVASVANAYL 179 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E ++++ L +++ L+ K+ GA S++ L + ++S + + ++ Sbjct: 180 TLLADQELLALSEATLATEQESYGLTEHKYRLGAASEMELAQGRTALESAKVSLAQYQRQ 239 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + ++ LLG T M + + + L I +G P+ L++ RPDI E L Sbjct: 240 VKQDRNGLALLLG---TSVPALMTEPATLAEVQL-AAIPVGAPSSLLQQRPDILAAEHSL 295 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG A++ +P++SL + A T N F G W+F P++ LPIFD GK Sbjct: 296 KAANANIGAARAAFFPTISLT-ATAGTASNQLSGLFDGGTGTWTFMPQINLPIFDGGKRI 354 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ AE S ++ ++++++ A KEV + L + + ++ + Q V+ + L+ Sbjct: 355 ADLDVAEVSTKQAVASYEKSIQTAFKEVADTLGAQADYQQQLQAQQELVKASQTYFKLAE 414 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y +G S L LD +R+ + L + + V LY A+G G+ Sbjct: 415 VRYEKGVDSYLTRLDAQRSLFSAKQGLITTRLAQLSNQVALYKAVGGGWQ 464 >gi|254254645|ref|ZP_04947962.1| RND efflux system [Burkholderia dolosa AUO158] gi|124899290|gb|EAY71133.1| RND efflux system [Burkholderia dolosa AUO158] Length = 491 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 108/427 (25%), Positives = 206/427 (48%), Gaps = 35/427 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY 101 +WW+ F D L+ L + AL N + A R+ A+ + R+ FP Sbjct: 55 EWWKVFGDPVLDSLEEQALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREG 114 Query: 102 ASISHRFIPNLK--TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 S + +F P TN+T Q ++ DLFG+ R++E+S A+ + A +L Sbjct: 115 LSSASQFQPQGTGPTNATLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLA 174 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y + R + + ++L ++ ++L +F +G S+L + + + E+ S Sbjct: 175 LQADVAQNYFELRQLDADQDLYRRTVELREQALKLVQRRFNEGDISELDVSRAKNELASA 234 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADL 271 ++D + + + H ++ LLG EF F+ +P+ + G+P+ L Sbjct: 235 QADAVGVARRRAASEHALAILLGKAPAEFA---------FKETPIVPVTVKIPPGLPSAL 285 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 + RPD+ E+ +A + A+IG+AKS +P L + GS A T N F + + GP Sbjct: 286 LERRPDVSAAERAMAAANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGP 345 Query: 329 ----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LP+FD G+ + +++A + EQ +++ VL A +EVE+ L ++ + Sbjct: 346 FAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLANLRLLDDQIR 405 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 AV +++ +LS Y++G + LD++D ER+ + ++ + A + V+L Sbjct: 406 AQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVATVNLIR 465 Query: 445 AIGSGYN 451 A+G G+ Sbjct: 466 ALGGGWG 472 >gi|115359443|ref|YP_776581.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115284731|gb|ABI90247.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 513 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 215/474 (45%), Gaps = 55/474 (11%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDVSTPAAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLESQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---------NLKTNSTG 118 AL N + A R+ A+ + R+ FP + F P L+ TG Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQ----VGAGFGPTRQGLSSASQLQPQGTG 147 Query: 119 QLDSD-WKI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ W+ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 148 PTNATLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELR 207 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + ++L + ++L +F +G S+L + + + E+ + ++D + + Sbjct: 208 QLDSDQDLYRRTVELRDQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAA 267 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKK 284 + H ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ Sbjct: 268 SEHALAILLGKAPADFA---------FKETPIVPVAVKVPAGLPSALLERRPDVSAAERA 318 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDK 337 +A + A+IG+AKS +P L + G+ A T N F + + GP L LP+FD Sbjct: 319 MAAANARIGLAKSAYFPKLDITGAFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDG 378 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + +++A + EQ +++ VL A +EVE+ L + + AV +++ Sbjct: 379 GRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAA 438 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LS Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 439 TLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 492 >gi|330957870|gb|EGH58130.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/471 (23%), Positives = 214/471 (45%), Gaps = 40/471 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-----KNLINIDTLKWWESFNDTSLN 62 F++ +L GC++ PEY +P P+ Q+ G + + W FND +L Sbjct: 8 FAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYTPAEAAKMAAAEQGWRHFFNDPALQ 66 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQL 120 +L++ AL N + A I+A + RADLFP S+ S + + +P +T TGQ Sbjct: 67 QLIETALLNNRDLRVAALNIDAYRAQYRIQRADLFPAVSATGSGARQRVPADQTQ-TGQS 125 Query: 121 D-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 S +++DLFG+ R + E +L + ++++++ + +Y+ + Sbjct: 126 AITSSYSATLGVSAYELDLFGRVRSLSEQALETYFATEEARRATQISLVANVANAYMTWQ 185 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 KE + + L Y+++ L+ G +S L L + ++S + + ++ Sbjct: 186 ADKELLKLTQDTLKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARARLAQYQRLVAQ 245 Query: 229 NVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + +++ LLG PA++ L ++ + G+P+DL++ RPDI E Sbjct: 246 DQNSLVLLLGTGLPDNLPASQLLD----------SDMLTEMPAGLPSDLLQRRPDILQAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +PS+SL S F G + W F P + +PIF+ G Sbjct: 296 HTLKAANANIGAARAAFFPSISLTASAGTGSTELSGLFKGGSGTWLFQPSINIPIFNAGS 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++++ ++ + +++ + A +EV + L S + + + V ++ L Sbjct: 356 LRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVTANQDYYRL 415 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 416 AERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|237746533|ref|ZP_04577013.1| RND efflux system [Oxalobacter formigenes HOxBLS] gi|229377884|gb|EEO27975.1| RND efflux system [Oxalobacter formigenes HOxBLS] Length = 563 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 131/461 (28%), Positives = 235/461 (50%), Gaps = 36/461 (7%) Query: 13 VLLAGCTVGPEYTKPH--MPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 LLAGC +GP+Y +P MP + S+ +K + +WW F+D L++L++ Sbjct: 74 ALLAGCAIGPDYVRPDTAMPAAYKEDSLWKTAKPADDYPRGQWWRVFHDAELDRLMERLN 133 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKTNSTGQLD 121 +QNLTI QA + A+ + + LFPS A S+ + + + G L Sbjct: 134 RQNLTIAQAEAQYRQAQALLRQAESALFPSLTLDAGRTRGALSSNSSALSTRNQAIGTLS 193 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DL+G RR++E+ A ++ AQ+D +L+ ++L +Y++ +I+ + Sbjct: 194 --WEVDLWGGIRRNVEAGEAGAAASIAQLDAIRLSQQAQLATAYLELIVTDRQIARLEES 251 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE-KSFRMNV-HNISTLLG 238 L ++++L+ ++ G S S+ + E+++K ++ TL+ K R+ + H I+ +G Sbjct: 252 EKLLAESLKLTQNQYNAGLVSDASVAQAESQLKIAQAA--TLDAKLARVRLEHAIAVSIG 309 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L ++ + Y+P I GIP+ L++ RPDI E+++A++ A IG+A+ Sbjct: 310 EAPAALTL-------SDATEDPYLPHIPAGIPSTLLQRRPDIAAAERRVAEANALIGVAQ 362 Query: 297 SDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 S +PSL+L G + + F N WS GP + L +FD G ++ A + E Sbjct: 363 SAFFPSLTLSATGGWSGPSFGDLFTVPNRIWSIGPAIALSVFDAGLRRAQTDEAIAVYDE 422 Query: 354 QYITWQETVLNAIKEVEN--ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ VL A +EVE+ A ++ +D+ + AV ++S ++++ YR G Sbjct: 423 TVAAYRQQVLTAFQEVEDNLAAQAMLDDESALQS--AAVAAARRSETITLNQYRAGIVGY 480 Query: 412 LDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYN 451 L++L + + E L I KRQ A S V L AIG + Sbjct: 481 LELLVAQTSRIAAENTLWDIRKRQFASS-VALIAAIGGQWG 520 >gi|48927350|emb|CAG34251.1| outer membrane protein [Stenotrophomonas maltophilia] Length = 466 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 106/455 (23%), Positives = 213/455 (46%), Gaps = 34/455 (7%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC T+ P+ T P +P Q+ ++ + ++ + W + F D L +++ +LQ N Sbjct: 23 GCSTLVPKNTA-VAPAIPAQWPAEATQGQVADVAAVGWRDFFTDARLQQVIDQSLQNNRD 81 Query: 75 ILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSD 123 + A + A+ RAD P + A ++ +F + ++ Sbjct: 82 LRVAVLNVERARGQYRVQRADRVPGVAVTGQMDRRGTDAGVTEQFTAGVGV-------AE 134 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R++ E++L + A A+L+++++ +++ +R+ IA L Sbjct: 135 FELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGADAQRLKIADATLK 194 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y+ ++ L+ + +G +S L L + +++ +D L + + ++ L G Sbjct: 195 TYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQDRNALALLAGGQLD 254 Query: 243 EFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L ++ +P L P G+P+D++ RPDI E +L + A IG A++ + Sbjct: 255 PALL-----PDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANIGAARAAFF 309 Query: 301 PSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL GSI N F WSF PK+ LPIF GK+++N+ A + Sbjct: 310 PSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAIANADRDIALAQ 369 Query: 358 WQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +E +AL +++ D+++ ++ Q VE +++ LS Y G S + +LD Sbjct: 370 YEKSIQVGFRETADALALNVSLDEQVSSQ-QRLVEAAEQANRLSQARYDAGLDSFVTLLD 428 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + A+ + + LY +G G++ Sbjct: 429 ARRTAYNAQQTQLQAQLAQQANRITLYKVLGGGWH 463 >gi|294055180|ref|YP_003548838.1| RND efflux system, outer membrane lipoprotein, NodT family [Coraliomargarita akajimensis DSM 45221] gi|293614513|gb|ADE54668.1| RND efflux system, outer membrane lipoprotein, NodT family [Coraliomargarita akajimensis DSM 45221] Length = 473 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 116/451 (25%), Positives = 198/451 (43%), Gaps = 23/451 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L +GC E + LPT +S I T WW +F LN L A Sbjct: 17 LLSSGCYTATEREAEELQALPTDYSRPVDSTTEPESIADTTTAWWINFERDDLNSLQAEA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQLDSD 123 L NL + QA R+ A+ + ADL+P + Y + L+ Sbjct: 77 LSNNLGLAQAWARLRQAEASARQAGADLYPDLTLNAGYQRTWQETGDTAASKYNAGLNVS 136 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++D++G+ R +++ A + + L + + + +I + RI++ Q L Sbjct: 137 YELDVWGKVRAGQQAAGAEAAARAEDLQSTGLTLSANVADLWIQIIELQNRIALLQQQLK 196 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + +EL L+F S L + + I S++P+ E + H+++ LLG AT Sbjct: 197 INQTQLELVELRFQTSRASSLDVYQQRQTIARTRSELPSTEATLAAAQHSLNLLLGQAAT 256 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 L +Q+ P L +IGIP++LI RPD+R ++ + + AK+D PS Sbjct: 257 TPLEINWQQA----PTLPSLPSIGIPSNLIEQRPDVRAARLRIEQADWNLARAKADRLPS 312 Query: 303 LSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 + L G + T D F +W F L PI D G+ K + + + E ++ Sbjct: 313 IGLTGELGSTSDQ-FEELFENWLAKFAANLSAPILDGGRRKLEVEKQLAVVDEAIANYRL 371 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVL A KEVE+AL + + + ++ +EL +K++ + Y Y L D L++ A Sbjct: 372 TVLTAFKEVEDALMLEQKVGEQLAAVRTELELARKTLDEARNRY---AYGLSDYLNVTSA 428 Query: 421 TAKVEVDLSIAKRQLAKSY---VDLYIAIGS 448 V+ Q+A Y +DL+ A+G Sbjct: 429 LISVQNLERSEITQVANQYKARIDLHKALGG 459 >gi|92117594|ref|YP_577323.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] gi|91800488|gb|ABE62863.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] Length = 494 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 212/469 (45%), Gaps = 51/469 (10%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC + + P + + P + TL WW F L L++ A NL I Sbjct: 36 AGCILTRDLPDPALDI-PAGYKAARLTTTEAPPTLDWWRGFRSPELTDLMEEAQTVNLDI 94 Query: 76 LQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQL-------- 120 AT RI A + A L PS +Y+ S L TN ++ Sbjct: 95 AAATARIIQADQQARIAGAALLPSVSVGGQETYSRTSGSSSSGL-TNRGREVVNYSSSLS 153 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQV---DIAKLNVISKLIPSYIDARHFKERISIA 177 + ++ID +G+ R +++LA ++A A D+ L ++ + +Y ++RI A Sbjct: 154 AASYEIDFWGKNR--DATLAAEETATASRFDRDVVGLTTLTSVANAYFQVLAAQDRIRTA 211 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + + ++ + + G + L + + E+ + + + +P L + N++ ++TL+ Sbjct: 212 ERNIASAVRILDAIKQRLSAGTGTDLDVAQQESVLANQRAAVPPLRQILAQNINALATLV 271 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P E + N P G+P++L+ RPDIR QE +LA + A +G A++ Sbjct: 272 ARP-PESVKVKGGSLNQIAAPRVTP---GLPSELLTQRPDIRRQEAQLASATANVGSARA 327 Query: 298 DLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +PS+ L G S AL F +S L PIFD G+I N ++ Sbjct: 328 QFFPSIQLTGQGGYQSSALVA--LFQPQAAFFSLAGGLTQPIFDGGRILGNFEYTKAKQD 385 Query: 353 EQYITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSMSLSMINYR 405 E T+++TV++A +V+NAL +I + +K+VT + A EL ++ + R Sbjct: 386 ELLQTYRKTVVSAFADVDNALIAIRQTTERLRLQRKVVTASRRAFELGEQQL-------R 438 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 G ++ +L+ + + E LS A QLA+ + V LY A+G G+ P Sbjct: 439 AGTADIVTVLNTQLTLFQAEDSLSQA--QLARLLAVVSLYQALGGGWEP 485 >gi|124383029|ref|YP_001025939.1| outer membrane efflux protein OprC [Burkholderia mallei NCTC 10229] gi|126442317|ref|YP_001061521.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 668] gi|126447589|ref|YP_001078028.1| outer membrane efflux protein OprC [Burkholderia mallei NCTC 10247] gi|166999798|ref|ZP_02265628.1| outer membrane efflux protein OprC [Burkholderia mallei PRL-20] gi|167848387|ref|ZP_02473895.1| outer membrane efflux protein OprC [Burkholderia pseudomallei B7210] gi|254176572|ref|ZP_04883230.1| outer membrane efflux protein OprC [Burkholderia mallei ATCC 10399] gi|254359003|ref|ZP_04975275.1| outer membrane efflux protein OprC [Burkholderia mallei 2002721280] gi|126221808|gb|ABN85313.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 668] gi|126240443|gb|ABO03555.1| outer membrane efflux protein OprC [Burkholderia mallei NCTC 10247] gi|148028190|gb|EDK86150.1| outer membrane efflux protein OprC [Burkholderia mallei 2002721280] gi|160697614|gb|EDP87584.1| outer membrane efflux protein OprC [Burkholderia mallei ATCC 10399] gi|243064114|gb|EES46300.1| outer membrane efflux protein OprC [Burkholderia mallei PRL-20] gi|261827095|gb|ABM99961.2| outer membrane efflux protein OprC [Burkholderia mallei NCTC 10229] Length = 510 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 211/470 (44%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|126441010|ref|YP_001057907.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 668] gi|126454516|ref|YP_001065142.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 1106a] gi|134279820|ref|ZP_01766532.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 305] gi|217420291|ref|ZP_03451797.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 576] gi|237811057|ref|YP_002895508.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] gi|242316555|ref|ZP_04815571.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106b] gi|254181592|ref|ZP_04888189.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1655] gi|126220503|gb|ABN84009.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 668] gi|126228158|gb|ABN91698.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106a] gi|134249020|gb|EBA49102.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 305] gi|184212130|gb|EDU09173.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1655] gi|217397595|gb|EEC37611.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 576] gi|237504962|gb|ACQ97280.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] gi|242139794|gb|EES26196.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106b] Length = 514 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|76809792|ref|YP_332432.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254259380|ref|ZP_04950434.1| outer membrane multidrug efflux protein OprB [Burkholderia pseudomallei 1710a] gi|76579245|gb|ABA48720.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254218069|gb|EET07453.1| outer membrane multidrug efflux protein OprB [Burkholderia pseudomallei 1710a] Length = 514 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|76818680|ref|YP_335239.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|76583153|gb|ABA52627.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] Length = 551 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 58 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 117 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 118 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 177 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 178 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 237 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 238 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 297 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 298 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 354 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 355 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 414 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 415 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 474 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 475 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 515 >gi|56554391|pdb|1WP1|A Chain A, Crystal Structure Of The Drug-Discharge Outer Membrane Protein, Oprm gi|56554392|pdb|1WP1|B Chain B, Crystal Structure Of The Drug-Discharge Outer Membrane Protein, Oprm Length = 474 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 202/463 (43%), Gaps = 41/463 (8%) Query: 18 CTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQQN 72 C++ P+Y +P P+ P + G + + + W E F D L +L+ +AL+ N Sbjct: 1 CSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALENN 60 Query: 73 LTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLDSD------ 123 + A + A + RADLFP + R +L T + + S Sbjct: 61 RDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLG 120 Query: 124 ---WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DLFG+ R + A Q A+ +++ + +Y+ + + ++ + Sbjct: 121 TTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKD 180 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-- 237 L Y+K+ +L+ + G S L L + + ++E TL + R+ + + L+ Sbjct: 181 TLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQYTRLVAQDQNALVLL 237 Query: 238 ---GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G PA Q L + G+P+DL++ RPDI E +L + A IG Sbjct: 238 LGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLMAANASIGA 291 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL G+++ F + W F P + LPIF G +++++ A+ Sbjct: 292 ARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQK 351 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS---MSLSMINYRQGR 408 +++ + A +EV + L + +LQ +L K S L+ YR G Sbjct: 352 DINVAQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKASDEYYQLADKRYRTGV 408 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L +LD +R+ + L + S V+LY A+G G+N Sbjct: 409 DNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWN 451 >gi|284159973|ref|YP_001062578.2| outer membrane efflux protein OprB [Burkholderia pseudomallei 668] gi|283775159|gb|ABN88292.2| outer membrane efflux protein OprM [Burkholderia pseudomallei 668] Length = 512 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|53722148|ref|YP_111133.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|52212562|emb|CAH38588.1| putative outer membrane efflux protein [Burkholderia pseudomallei K96243] Length = 512 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A++QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALGGGW 475 >gi|332185518|ref|ZP_08387266.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332014496|gb|EGI56553.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 473 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/460 (23%), Positives = 201/460 (43%), Gaps = 41/460 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C++ P T P P+ + I + + +W F D L L+ ++L N + Sbjct: 17 CSMTPRLTLPTPPVAEA-YPIASGAEALP----EWRGMFGDPRLQSLIALSLDANRDLRI 71 Query: 78 ATERINAAKENILSVRADLFP--------------SSYASISHRFIPNLKTNST--GQLD 121 A A+ + RA P +S A P + GQ Sbjct: 72 AALNAEGARAQVRVQRAQSLPGVNVDAGYTRQRQPASVAGAGVGLTPGSEARGFEFGQFS 131 Query: 122 SD-----WKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + ++IDLFG+ R + + LA++++ A +L VI + +Y + R Sbjct: 132 AQAALTSFEIDLFGRLRAMNEAAFHRWLASVEARRA----VRLAVIGAVADAYWNERLAD 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++++ L ++ +++++ L+ G S L + E ++ ++D+ E+ + Sbjct: 188 EQLALTRSTLADWRASLDITRLRKDAGQASGADLAQAEGLVRQAQADLAQRERELAQATN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ +G P L + QP + I + G +DL+ RPDI E++L + A Sbjct: 248 ALTLAVGAPLPNDL--LPPTPLMDQP-IRIALAAGTRSDLLTRRPDIAQAEQELRAANAD 304 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL G +L D+ F G N WS+ P + LPIF G+++ N+ A Sbjct: 305 IGAARAAFFPRVSLTAAFGFASLALDSLFQGANRSWSYSPAISLPIFRGGELRGNLDLAR 364 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 A T+++ + +EV + L + + +T+ + V ++ L+ + YR G+ Sbjct: 365 LRASTAIATYEKAIQTGFREVADGLAAQATYGRQMTEQRAVVGEAERRARLTDLAYRAGQ 424 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S L++LD +RA I +R + LY A+G Sbjct: 425 TSRLELLDAQRAIYGARQSALIVRRDQLTAAAALYRALGG 464 >gi|239817287|ref|YP_002946197.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239803864|gb|ACS20931.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 483 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 121/460 (26%), Positives = 210/460 (45%), Gaps = 28/460 (6%) Query: 17 GCT---VGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTL---KWWESFNDTSLNKLVKIA 68 GC VGP+Y P S G ++ DT WW +ND L+ LV A Sbjct: 17 GCVHPPVGPDYVTPTSLSSAQSASAGTFRSAGGDAADTTLPPHWWRLYNDRQLDALVTQA 76 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------------IPNLKT 114 L+ N + +A + + V + P+ AS F P+ T Sbjct: 77 LEHNTDLRRAVANLERYQALEAEVHGNEKPTVAASGGPGFGHVSGLSLLQRDDEPPSRGT 136 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S G + +++DLFGQ RR IE++ A+ +A A +D+ +++V + +Y A R Sbjct: 137 YSAG-VSLSYQLDLFGQVRRAIEAAEADTGAAQAALDLVRVSVAGSVAHAYAQACSSGYR 195 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + A + + L ++ I LS G ++ + + + +++ + + +P L + ++ + Sbjct: 196 LRAAQESVRLQEEAIRLSERLQQGGKVGEIDIARAQGQLEQLRAALPPLRAQRQGALYRL 255 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TL G +F + + P L + +G A L+R RPD+R E+ LA + A+IG Sbjct: 256 ATLTGAAPRDFPAAVA--TCEQPPRLAGLLPVGDGAALLRRRPDVRQAERSLAVATARIG 313 Query: 294 IAKSDLYPSLSLNGSIALTHD-NSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +A +DLYP +SL S + F T +S GP + + + G ++ I +AE++ Sbjct: 314 VATADLYPKVSLGLSASSAGFLARFGNRETLSYSLGPLINWTLPNTGVARARIAQAEAAT 373 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + TVL A++EVE AL + + L A E + Y G+ Sbjct: 374 RVAAARFDGTVLTALREVETALDVYARELERHAALSAAQEQSAIVARQARKLYVNGKTGQ 433 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ LD ER A E L+ + LA+ V +++A+G G+ Sbjct: 434 LEALDAERTLAASEAALATSAALLAEGQVAVFMALGGGWE 473 >gi|76819413|ref|YP_336999.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|126457420|ref|YP_001074461.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1106a] gi|167741311|ref|ZP_02414085.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei 14] gi|167896942|ref|ZP_02484344.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei 7894] gi|167905325|ref|ZP_02492530.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei NCTC 13177] gi|167913623|ref|ZP_02500714.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei 112] gi|167921566|ref|ZP_02508657.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei BCC215] gi|217422954|ref|ZP_03454456.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 576] gi|242312899|ref|ZP_04811916.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1106b] gi|254189394|ref|ZP_04895904.1| outer membrane efflux protein OprC [Burkholderia pseudomallei Pasteur 52237] gi|254195547|ref|ZP_04901975.1| outer membrane efflux protein OprC [Burkholderia pseudomallei S13] gi|254263033|ref|ZP_04953898.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1710a] gi|254299451|ref|ZP_04966900.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 406e] gi|76583886|gb|ABA53360.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] gi|126231188|gb|ABN94601.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1106a] gi|157809346|gb|EDO86516.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 406e] gi|157937072|gb|EDO92742.1| outer membrane efflux protein OprC [Burkholderia pseudomallei Pasteur 52237] gi|169652294|gb|EDS84987.1| outer membrane efflux protein OprC [Burkholderia pseudomallei S13] gi|217393862|gb|EEC33882.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 576] gi|242136138|gb|EES22541.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1106b] gi|254214035|gb|EET03420.1| outer membrane efflux protein OprC [Burkholderia pseudomallei 1710a] Length = 510 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 211/470 (44%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|53717057|ref|YP_106065.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|67639929|ref|ZP_00438756.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|52423027|gb|AAU46597.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|238520549|gb|EEP84008.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] Length = 510 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 211/470 (44%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGTFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|187920631|ref|YP_001889663.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187719069|gb|ACD20292.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 506 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 115/475 (24%), Positives = 214/475 (45%), Gaps = 49/475 (10%) Query: 15 LAGCTVGPEYTKPHMPL--------LPTQFS-----IGNSKNLINIDTL--KWWESFNDT 59 +AGC VGP+Y P P LP Q + G + + + WW F+ Sbjct: 24 VAGCMVGPDYRTPPAPATDTYTASPLPEQTASSPGAAGLPQRFVPGQDIPAAWWVLFHCE 83 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASI--SHRFIPNLKTNS 116 L+ L++ AL + I A + A+EN + L PS A + + + + Sbjct: 84 PLDTLIRQALVNSPNIAAAQAALRQARENFSAQAGGTLLPSVDAQLGATRQKFNGITFGE 143 Query: 117 TGQLDS----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 G ++ +K+D+FG RR +E+ A +D Q+ A L + + ++ + + Sbjct: 144 PGVVEEFNLYNASVNVSYKLDVFGGTRRELEALHAQVDYQRFQLQAAYLAMSANIVTAAV 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +I QI + + +F G + +++ + + + +P L++ Sbjct: 204 KEASLRAQIEATEQIAAQEDEQFTVLGKQFELGGVGRTAVLAQQTLLAQTRATLPPLQQQ 263 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY-IP--INIGIPADLIRNRPDIRYQ 281 H ++ L G P+ L F+ ++ +P + + +P+ L++ RPDI Sbjct: 264 LDQVRHQLAVLAGKLPSDTAL-------PEFRLEMFSLPEALPVSLPSALVQQRPDILAA 316 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + L + A+IG+A + +YP ++L+ G+ ALT F +T WS G L P+F G Sbjct: 317 DAVLHQASAQIGVATAAMYPQITLSASYGAEALTPAQVFKAGSTIWSLGAGLLQPVFHGG 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + R AE++ ++ ++ETVL A + V ++L +++ D + A S+ Sbjct: 377 QLSAQKRAAEAAYEQADAQYRETVLLAFQNVADSLRALDHDATGLQAQTQAWHAANDSLE 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 L+ YR G S L +LD +R + V L+ A+ A Y D L+ A+G G+ Sbjct: 437 LTRGQYRVGGVSYLSLLDAQRQYQQTVVSLAQAQ---AARYADTAALFQALGGGW 488 >gi|330992428|ref|ZP_08316376.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329760627|gb|EGG77123.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 527 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/464 (23%), Positives = 212/464 (45%), Gaps = 28/464 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L +V LAGC + P Y P + T Q ++ + + WW F D L++L Sbjct: 16 ALALVSLAGCDLAPAYHAPRYVIPATWQGQAPFAVAQPMDDRIPANWWTGFADPRLDELE 75 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI----PNLK 113 +A N + A+ER A+ + RADL P S+ S + R P Sbjct: 76 TLAADHNGDLQAASERFLQARAIVSEARADLLPHFGLAFGGSNNKSSAERLFRYKGPITD 135 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 ++ + W+ D + R + A AQ A+L++ ++L Y R Sbjct: 136 SDEFYGGMASWEPDFWSSIRNRVRLQKDYAQEAAAQYASARLSLQAELASDYFTLRGLDA 195 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +I Q + Y++++ ++ + A S+L + + + ++ + ++ + ++ + H Sbjct: 196 QAAIYTQSIGYYEESLRVTQTRLVDQAASQLDVARAQNQLYTTQARLLDIQAQREVMEHA 255 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+ L+ + F N + ++ G+P+DL++ RPDI E+++A + I Sbjct: 256 IAVLVNVAPSAFHIPADAHLNATR----FTLSAGVPSDLLQRRPDIAVAERQMAQANRAI 311 Query: 293 GIAKSDLYP--SLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 GIA++ YP S +NG DN F N+ WS+G + +P+F+ G ++ ++++ Sbjct: 312 GIARAAFYPHVSFQMNGGF---DDNGFNLANLANSMWSYGATVTMPVFEGGLRRAQLQQS 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 S+ +E ++ TVL A ++VE+ L+ +L AV ++ ++M Y+ G Sbjct: 369 WSAYRETRDHYRMTVLTAFRDVEDGLSRTRRLDGENDRLHAAVGAASQTQDITMNLYKGG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD+L + +T + + + ++ V L A G G++ Sbjct: 429 LATYLDVLIAQVSTLDARIQQVEVQTRYLQARVGLIRACGGGWD 472 >gi|57242722|ref|ZP_00370659.1| multidrug efflux pump channel protein, putative [Campylobacter upsaliensis RM3195] gi|57016651|gb|EAL53435.1| multidrug efflux pump channel protein, putative [Campylobacter upsaliensis RM3195] Length = 478 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 119/467 (25%), Positives = 215/467 (46%), Gaps = 39/467 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 IF L LL C++ KP++ + F+ + N I+I+ WW+ FND++LN LV+ Sbjct: 5 IFILTAFLLGACSL-----KPNLKVDKANFT--SMDNNISIEK-NWWKDFNDSNLNLLVE 56 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN---LKTNSTGQ---- 119 AL+ N + A + A + R+ L P AS + N N TG Sbjct: 57 KALKNNADLKIAYINLEQAAAQLGIDRSGLLPKLDASANANRAKNSINALNNKTGAFSYN 116 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L+ +++DL+G+ R + +S NL ++ +A+L++IS ++ Y ++ + E Sbjct: 117 NSFDMGLNLSYEVDLWGKYRDNYNASYENLKASEFDYVVARLSIISNVVQMYFNSANAYE 176 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD----IPTLEKSFRM 228 + I + ++ Y + EL + GA + L + +AE++S+++ I T E + Sbjct: 177 AMQIYKETMEAYTQTYELKRSLYEIGAIGEYELAQSKAELESVKAQYINAIDTKENYLKA 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLA 286 + L + L+ + N+Q + ++ GI + ++ RPDI +L Sbjct: 237 ----LKILTASDLDDVLY----KEENYQKFTHFAKSLPEGISSTILLQRPDINAALSRLT 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 +G+A+S PSLSL G + D + WS G K +PIF G+I + Sbjct: 289 QQNYLVGVARSAFLPSLSLTGLLGFESGDLDTLVKDGSKAWSVGGKFLMPIFHWGEIYQS 348 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A+ S + ++T++ T+ A EV AL+ + + +E +K +L+ I Sbjct: 349 VNLAKLSKDKAFVTYENTLKTAFAEVRYALSRRKTSLQNYENYKALLEAQEKIYTLASIR 408 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L++ LD R ++ + A +A S VD+ A G G+ Sbjct: 409 YENGSIPLIEYLDARRNLLSAKISYTNATYLMANSIVDVIKAFGGGF 455 >gi|323528544|ref|YP_004230696.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385546|gb|ADX57636.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 477 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/434 (23%), Positives = 212/434 (48%), Gaps = 18/434 (4%) Query: 31 LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 L P +++ ++ +N + WW+ F D +++LV+ L NL + A ER+ A++ + Sbjct: 37 LAPDAWNVDAPQDSVNANV--WWDQFGDPVMHRLVESVLTGNLDVQAAVERVRQAQDLVT 94 Query: 91 SVRADLFP----SSYASISHRFIP---NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANL 142 RA L P + A+ S + P + L + W D+FG +R + ++ A + Sbjct: 95 QNRAALLPELNAGANAAYSRQNTPPPLGYVRQAGAGLTASWTPDVFGGERLAVLAAQAQV 154 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + ++ +L + + +YID R + ++ I + ++ ++L+ + G +S+ Sbjct: 155 SGKQSALNEMRLALAANTAAAYIDLRWTQAQLEILLDNEQIRERALKLTQQRLHYGLSSQ 214 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYI 261 L + + + ++ +++ IP ++ + + I+ G + +++ P + Sbjct: 215 LDVARAQNQLDDLQAQIPRVQTVVQHQLSLIAVYSGRTPESVDSLLLADAHDIPAPTQRV 274 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 P + P++ + RPD+R + A++G++K++ YP LN + L +S+ G Sbjct: 275 PQTL--PSEALLQRPDVRTAYAAVEQRAAEVGVSKAERYPKFKLNLADGLLA-SSYLGLP 331 Query: 322 TH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 T +S PIF+ G+I +NI +ES +E + ++T+L A+KE+E+ + + Sbjct: 332 TLTDNLFSAALSATSPIFNAGRISANIDASESRMRESQLGLRQTMLQALKEIEDNRSELV 391 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 V +L A++ ++ LS Y+ G S LD+L + A + L+ A+R+ A Sbjct: 392 SGAVQVQRLGGALDASNHALRLSTELYKGGASSFLDVLAAQEAYLRDAESLNQARREHAL 451 Query: 438 SYVDLYIAIGSGYN 451 + V LY A+G G++ Sbjct: 452 AAVALYRALGGGWD 465 >gi|294665294|ref|ZP_06730587.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604930|gb|EFF48288.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 503 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 113/485 (23%), Positives = 217/485 (44%), Gaps = 36/485 (7%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFS----------------IGNSK 42 M +R V +L+GCT+ P YT+P P+ P QF+ G++ Sbjct: 1 MTTIRTTLCALGVASVLSGCTLMPRYTRPDAPV-PAQFAGTDVSVAPPAAAATADTGSNA 59 Query: 43 NLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--- 99 + +I + W + F D +L +++ +AL N + A I A+ RA L P+ Sbjct: 60 DTAHIADIGWRQVFTDPALQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIDG 119 Query: 100 -----SYASISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQV 149 + + S IP +T S S +++DLFG+ R + E +L S Sbjct: 120 TGTANNARTPSELAIPGQPQVFRTYSANIGISAYELDLFGRVRSLKEQALQQFLSTAEAR 179 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +++++++ +Y+ ++ + +A L + L F G S+L+L + + Sbjct: 180 RSTHISLVAEVATAYLTLAADQQLLQLAQSTLTSQSDSYRLQQRSFELGVASQLTLRQAQ 239 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIP 268 +++ D+ + + + L+G E L + + + + N+ + G+P Sbjct: 240 TTVETARVDVERYTAQVAQDRNAMVLLVGTQVPVELLPHALPDNASVEGNVLASVPAGLP 299 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWS 325 + L++ RPDI E+ L + A IG A++ +PS+SL S + + F WS Sbjct: 300 SQLLQRRPDILEAERNLRAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWS 359 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 F P L LPIF+ G+ ++N+ A+++ + +++++ +A +EV +AL + + + Sbjct: 360 FVPTLTLPIFNAGRNRANLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQA 419 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q V+ S LS + +G S L LD +R+ + L + + V Y A Sbjct: 420 QQALVDATADSYRLSQARFERGIDSYLQALDAQRSLYSAQQTLINTQLSRFTNLVTFYKA 479 Query: 446 IGSGY 450 +G G+ Sbjct: 480 MGGGW 484 >gi|115352149|ref|YP_773988.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115282137|gb|ABI87654.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 471 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/469 (24%), Positives = 206/469 (43%), Gaps = 43/469 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 + LLAGC+ P Y P +P+ P F G + D L WW + D +L++L + Sbjct: 13 VALLAGCSFAPTYHAPAVPV-PAAFRETGPWVDAAPADRLPRDGWWRVYGDATLDRLEPL 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKT 114 + N + A R + A A L P S+ + P++ Sbjct: 72 VARANPDLAAAVARHDEAAALFDEAHAALLPTIGIGAETDRDRQSARRPLRGSGQPDVYE 131 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFK 171 ++T + IDL+G+ R+ + A D+A A D +L++ +++ +Y D Sbjct: 132 SNTLDAGLGYDIDLWGKVRNTVA--AGRDNAQAAADDLASVRLSLQARVASTYFDLAGLD 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 Q +D Y++ +L+ + G S L + + + ++ ++ + ++ H Sbjct: 190 READSLAQTIDAYRRAWQLTVSRHRGGLASGLDVSRAQTQLALAQARASDIAARRALDEH 249 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G A+ F +P I G+ + L+ RPDI E+++A + A Sbjct: 250 AIAVLVGVSASTF------SLPAAAALPAVPSIPTGLASTLLERRPDIAAAERRVAAANA 303 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A++ +P LSL D P N WS GP+L +FD G + +R A Sbjct: 304 RIGVARAAYFPDLSLGLDAGFQSDTFSPWLAAPNEIWSIGPRLATTLFDGGLRAAGVRHA 363 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + EQ ++ VL A +EVE+ L ++ + A+ ++S++L+M YR G Sbjct: 364 RAQFAEQGARYRSVVLAAFREVEDDLALLHRLGDESAQDDAALVAAQQSLALAMSRYRDG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIAK-----RQLAKSYVDLYIAIGSGYN 451 S LD++ + E+D IA R+L S V L A+G G+ Sbjct: 424 AVSYLDVVTAQ----TTELDTQIASLDVDARRLQAS-VALVRALGGGWR 467 >gi|260899475|ref|ZP_05907870.1| outer membrane efflux protein [Vibrio parahaemolyticus AQ4037] gi|308109238|gb|EFO46778.1| outer membrane efflux protein [Vibrio parahaemolyticus AQ4037] Length = 500 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 117/479 (24%), Positives = 225/479 (46%), Gaps = 50/479 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNL 73 LAGC VGP+Y P + T + N+ + ++ WW F+D LN++V+ QN+ Sbjct: 15 LAGCAVGPDYQAPTTSMAETYLNAENAGLSTDSQPVEFWWTKFHDPVLNQMVQDMQSQNI 74 Query: 74 TILQATERINAAKENILSVRADLFPS---SYASISHRFIPN----------LKTNSTG-- 118 + A ER+ A V + P+ ++++F N L + +G Sbjct: 75 PLKVAAERVKMANNYKTMVESFKVPTINLGAGYMNYQFSKNDSSLGPILNPLSDSVSGLP 134 Query: 119 -----------QLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--S 158 Q D W+ DLFG R +++ A + AQ+ + LN + + Sbjct: 135 PQIGNVTLMDNQHDGVFAGASIAWEADLFG-RIDRQANAAQIRLEQAQIYQSGLNTVITA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 LI +Y+ + ER+ +A L+ ++ ++L G S L L + +A + ++ES Sbjct: 194 DLIHNYLQYQGASERLELAKSNLEDQRRTLDLVGKVVRSGYGSDLDLAQAKATLAAMESL 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R DI Sbjct: 254 VPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHS--VPVMQDMVPVGLPSDLLKRRTDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + +D YP L G+ L + D+ F + W + +F Sbjct: 312 RLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSWNLF 371 Query: 336 DKGKIKS----NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 D G+ ++ N R +S+ +++Q TV +A+ E E++L + ++ ++ A++ Sbjct: 372 DGGRGEAIEAINQARFDSAT----LSYQHTVESALAETESSLFAYGRSQENQRRIDAALK 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + YR G L +LD +R ++ AK Q A++ + LY ++G + Sbjct: 428 ATNNAVNKAKSLYRAGLIDHLSVLDAQRQQRMMQDQQVAAKLQTAQATIALYKSLGGDW 486 >gi|296137238|ref|YP_003644480.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] gi|295797360|gb|ADG32150.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] Length = 500 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 119/481 (24%), Positives = 216/481 (44%), Gaps = 48/481 (9%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMP--------LLPTQF-----SIGNSKNLINIDTLK-- 51 +L LL GCT VGP++ P P LP Q ++G ++ ++ + Sbjct: 13 IALGAALLGGCTTVGPDFHTPKAPSVQQYTREALPAQTASAPGTLGGTQRFQTVERIAPD 72 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + + L+ LV A + + T+ A + A++ + Y +++ + N Sbjct: 73 WWRVYGSSRLDSLVDAAQRSSPTLAAAEATLRQAQQTYQAQAGSTL---YPTVNGKLGAN 129 Query: 112 L-KTN--STGQLDS--------------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 +TN S GQ S ++ DLFG RR +E+ A D Q+ AK Sbjct: 130 RNQTNAASVGQSSSATNIFNLYNASIAVNYNFDLFGGNRRALEALAAQADYQQYQLQGAK 189 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + + ++ + +I IL + ++++ +F GA ++ ++ LE +++ Sbjct: 190 LTLAANVVTAAFTQAQLGAQIDATETILKAQQNQLDIARKRFALGAAARTDVLTLETQVE 249 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + IP L H ++ LLG A + + +F +P+ +P+ L Sbjct: 250 QTRASIPPLRNKLEQTDHLLAVLLGQAPGAADIPRFTLA---DFTLPQTLPVV--VPSAL 304 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 ++ RPDI+ + L + A+ G+A S+LYP ++L+ S+ ALT F + WS Sbjct: 305 VQQRPDIQASQALLHAATAQYGVAVSNLYPQINLSASLGTQALTMGALFGPGSAVWSLAG 364 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F+ G +K+ AE+S Q +Q+TVL A++ V +AL +++ D + + Sbjct: 365 SLAQPLFNAG-LKAGANAAEASLQAAGANYQQTVLQALRNVADALRALDNDAQTLQAQAA 423 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A ++S+ L Y G S L +L ++ + + L A+ Q LY A+G Sbjct: 424 ADTAAQESLKLVDQQYLLGAASYLQLLTAQQQAQQTRIGLISAQAQRLADSAALYQAMGG 483 Query: 449 G 449 G Sbjct: 484 G 484 >gi|194367238|ref|YP_002029848.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194350042|gb|ACF53165.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 461 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 106/455 (23%), Positives = 213/455 (46%), Gaps = 34/455 (7%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC T+ P+ T P +P Q+ ++ + ++ + W + F D L +++ +LQ N Sbjct: 18 GCSTLVPKNTA-VAPAIPAQWPAEAAQGEVADVAAVGWRDFFTDARLQQVIDQSLQNNRD 76 Query: 75 ILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSD 123 + A + A+ RAD P + A ++ +F + ++ Sbjct: 77 LRVAVLNVERARGQYRVQRADRVPGVAVTGQMDRRGTDAGVTEQFTAGVGV-------AE 129 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R++ E++L + A A+L+++++ +++ +R+ IA L Sbjct: 130 FELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGADAQRLKIADATLK 189 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y+ ++ L+ + +G +S L L + +++ +D L + + ++ L G Sbjct: 190 TYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQDRNALALLAGGQLD 249 Query: 243 EFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L ++ +P L P G+P+D++ RPDI E +L + A IG A++ + Sbjct: 250 PALL-----PDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANIGAARAAFF 304 Query: 301 PSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL GSI N F WSF PK+ LPIF GK+++N+ A + Sbjct: 305 PSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAIANADRDIALAQ 364 Query: 358 WQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +E +AL +++ D+++ ++ Q VE +++ LS Y G S + +LD Sbjct: 365 YEKSIQVGFRETADALALNVSLDEQVSSQ-QRLVEAAEQANRLSQARYDAGLDSFVTLLD 423 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + A+ + + LY +G G++ Sbjct: 424 ARRTAYNAQQTQLQAQLAQQSNRITLYKVLGGGWH 458 >gi|298488621|ref|ZP_07006651.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156962|gb|EFH98052.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQAGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + E Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYE 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPSGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|260753903|ref|YP_003226796.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553266|gb|ACV76212.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 859 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 108/432 (25%), Positives = 200/432 (46%), Gaps = 43/432 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV----RADLFPSSYASISH 106 +WWE FND LNKL++ + + ++ QA A N L+V R+ ++PS S S+ Sbjct: 400 RWWELFNDPELNKLIERSDVASQSVAQA----EATWRNALAVMGQNRSSMWPSISLSASN 455 Query: 107 RFI---------------------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 + N+ N L W D FG RR IE+S A ++ Sbjct: 456 QHTVTGGGSEVVNTAGGGSSTVSRSNISDNYRAGLSMSWTPDFFGGVRRQIENSRATAEA 515 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A ++ A+L + + + SY+ R I++ Q + Y +E++ +F G + Sbjct: 516 NMADIETARLALHAGVASSYLQLREADAEIAVMEQTIAAYTHALEVARNRFNAGIAPESD 575 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-I 263 + + E ++ + S I +L ++ R IS +G PA +F H + N++ P +P + Sbjct: 576 VFQAETQLSNTRSQIESLRQNRRTYEDAISVYVGIPAGDF-HIEPR--NDWSP--VVPDV 630 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGY 320 + +P+ L++ RPDI E+K+ + A IG+ K+ YPS S++ G A Sbjct: 631 PLDLPSTLLQRRPDIASAERKIEAASATIGVRKAAFYPSFSMSPYAGDTAGDITRLLAQS 690 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 ++ WS G + + D G S + +A ++ + +++ VL A + V + + + Sbjct: 691 SSIWSVGASMAFTVLDWGSHLSQLHQARAAYSQAVANYRQVVLQAYQNVADEIAATQIYG 750 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--S 438 T L A + +S ++ Y+ G + D++ +E T+ + S+ + QLA+ + Sbjct: 751 NQETHLNDAFKNADRSEQATLKRYQVGLVAYTDVVTVE--TSALSAKRSLMQTQLARQTA 808 Query: 439 YVDLYIAIGSGY 450 V L A+G G+ Sbjct: 809 AVSLIQALGGGW 820 >gi|83749511|ref|ZP_00946500.1| OprM [Ralstonia solanacearum UW551] gi|207738511|ref|YP_002256904.1| outer membrane channel lipoprotein [Ralstonia solanacearum IPO1609] gi|83723823|gb|EAP71012.1| OprM [Ralstonia solanacearum UW551] gi|206591879|emb|CAQ58785.1| outer membrane channel lipoprotein [Ralstonia solanacearum IPO1609] Length = 508 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 108/478 (22%), Positives = 213/478 (44%), Gaps = 48/478 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLI---NIDTLKWWES 55 +L + C VGP++ P P LPTQ + G ++ + N+ +WW++ Sbjct: 25 CLLASACAVGPDFKTPAAPAVSGYTEQPLPTQTAAAQTTGGEAQRFVSGMNVSE-QWWQA 83 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR----- 107 F LNK++ A + T+ A + A + + + FP +Y R Sbjct: 84 FRSDKLNKVIADAFAASPTLAAAQAALRQAHQQMRAQEGAYFPLVQGTYQPSRQRNAVGT 143 Query: 108 FIPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 P L + T QL + +D+FG RR +ES A D+ Y Q+ A L + S + Sbjct: 144 ISPTLASGDPIYSLHTAQLTVTYTLDVFGVNRRQVESLRAARDAQYFQLQAAYLTLASNI 203 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + + + +I +++++ + ++ +F GA + L + + ++ E +P Sbjct: 204 VVAAVQEASLRAQIEAQQRVVEINTQLLDNLRRQFQFGAVTGLDVAAGQTQLAQAEQALP 263 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDI 278 TL+K ++ L G +E + ++ F + +P + + +P+ L+R RPD+ Sbjct: 264 TLQKQLAQQRDLLAALAGRLPSEGIG----ETFTF-ADFTLPQDLPVSLPSALVRQRPDV 318 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E++L + A++G+A ++ P L+L G+ A F N WS + F Sbjct: 319 RAAEEQLHAATAQVGVAIGNMLPQLTLTGTKGGTATVFSQMFRDGNIFWSLVGGVAQTFF 378 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G + + R A++ + ++ TV+ A + V + L +++ D + L+ A++ + Sbjct: 379 DGGTLLAKKRAADAGVDQAEAQYRGTVITAFQNVADTLHALDADADV---LKAALKSEQA 435 Query: 396 SMSLSMINYRQ---GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + I RQ G ++L +L+ E+A A+ L+ A+G G+ Sbjct: 436 AHTTLDITTRQMGLGYVNVLAVLNAEQAYQTASQATITARASRFADTAALFQAVGGGW 493 >gi|167031222|ref|YP_001666453.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166857710|gb|ABY96117.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 472 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 114/473 (24%), Positives = 210/473 (44%), Gaps = 40/473 (8%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-------KWWESFND 58 I + + L C VGP+Y P + Q S N + D++ WW+ + D Sbjct: 5 ILAGLCLSLGACMMVGPDYEVPKDAAV--QRSDLNGPLRQDADSVVSAPVPEDWWQLYQD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG 118 LN+LV+ AL N + R+ AA + ++ S + + +G Sbjct: 63 QRLNELVRQALSANTEL-----RVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESG 117 Query: 119 Q-----------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + + + ++ DL+G +R E++ AN D+ A D A++ +++ + Sbjct: 118 EAFLLPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADV 177 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y E IA + LDL ++++ L+ G + + + + + KS+ +++P Sbjct: 178 VKAYTQVCSANEEYHIARESLDLQEQSVTLNQRLRDAGRGDETQVTRSQTQFKSLRAELP 237 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + ++ ++ LL P + + N +P+ G A L++ RPD+R Sbjct: 238 RFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDG--AALLKRRPDVRQ 295 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++LA + A IG+A LYP +S+ G+I + + P N W FGP++ I Sbjct: 296 AERQLAAATASIGVATGALYPDISIGAQVGTIGILENLGEPATN-RWGFGPQISWSIPTN 354 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++ IR AE+S Q + VLNAI+E + L + L A + K++ Sbjct: 355 G-TRARIRMAEASTQAALANFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAA 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ GR S L L RA + L+ A Q+A + +++A+G G+ Sbjct: 414 DQTHRYYQAGRESFLADLQATRAYTDMRAQLAAANSQVAMGQIGVFLALGGGW 466 >gi|172061013|ref|YP_001808665.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171993530|gb|ACB64449.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 471 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 117/469 (24%), Positives = 205/469 (43%), Gaps = 43/469 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 + LLAGC+ P Y P +P+ P F G + D L WW + D +L++L + Sbjct: 13 VALLAGCSFAPTYHAPAVPV-PAAFRETGPWVDAAPADRLPRDGWWRVYGDATLDRLEPL 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKT 114 + N + A R + A A L P S+ + P++ Sbjct: 72 VARANPDLAAAVARHDEAAALFDETHAALLPTLGIGAETDRDRQSARRPLRGSGQPDVYE 131 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFK 171 ++T + IDL+G+ R+ + A D+A A D +LN+ +++ +Y D Sbjct: 132 SNTLDAGLGYDIDLWGKVRNTVA--AGRDNAQAAADDLASVQLNLQARVASTYFDLAELD 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 Q +D Y++ +L+ + G S L + + + ++ ++ + ++ H Sbjct: 190 READSLAQTIDAYRRAWQLTVSRHRGGLASGLDVSRAQTQLALAQAHASDIAARRALDEH 249 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G A+ F +P I G+ + L+ RPDI E+++A + A Sbjct: 250 AIAVLVGVSASTF------SLPAAAALPAVPSIPTGLASTLLERRPDIAAAERRVAAANA 303 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A++ +P LSL D P N WS GP+L +FD G + + A Sbjct: 304 RIGVARAAYFPDLSLGLDAGFQSDTFSPWLAAPNEIWSIGPRLATTLFDGGLRAAGVHHA 363 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + EQ ++ VL A +EVE+ L ++ + A+ ++S++L+M YR G Sbjct: 364 RAQFAEQGARYRSVVLAAFREVEDDLALLHRLGDESAQDDAALVAARQSLALAMSRYRDG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIA-----KRQLAKSYVDLYIAIGSGYN 451 S LD++ + E+D IA R+L S V L A+G G+ Sbjct: 424 AVSYLDVVTAQ----TTELDTQIAALDVDARRLQAS-VALVRALGGGWR 467 >gi|254196269|ref|ZP_04902693.1| outer membrane efflux protein OprB [Burkholderia pseudomallei S13] gi|169653012|gb|EDS85705.1| outer membrane efflux protein OprB [Burkholderia pseudomallei S13] Length = 514 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 207/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A+ QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQHQLISARLARWTNLVDLYRALGGGW 475 >gi|299768951|ref|YP_003730977.1| outer membrane protein (AdeC-like) [Acinetobacter sp. DR1] gi|298699039|gb|ADI89604.1| outer membrane protein (AdeC-like) [Acinetobacter sp. DR1] Length = 484 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 114/456 (25%), Positives = 222/456 (48%), Gaps = 22/456 (4%) Query: 9 SLFIVLLAGCTV--GPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 S + L+ C GPE P + +P ++ NS + +I + + F+D L ++ Sbjct: 15 SALALALSACQSMRGPE---PVVKTDIPESYAY-NSASGTSIAEQGYKQFFSDPRLLGVI 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFIPN--LKTNST 117 +AL N + AT I A++ + + P+ AS +S PN T Sbjct: 71 DLALANNRDLRTATLNIERAQQQYRITQNNQLPTIGASGSAIRQVSQSRDPNNPYSTYQV 130 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D +G+ R + +++L + S + D ++++IS++ ++++ + + Sbjct: 131 GLGVTAYELDFWGRVRSLKDAALDSYLSTQSARDSTQISLISQVAQAWLNYSFATANLRL 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L + + L+ +F G S++ L + + +++ +D+ + + ++ L Sbjct: 191 AEQTLKAQQDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIAQAQNLLNLL 250 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G + L Q Q N+Y G+P+DL+ NRPD++ E L+ + A IG AK Sbjct: 251 VGQSVPQNLLPNQPVKRITQQNVYTA---GLPSDLLNNRPDVKAAEYNLSAAGANIGAAK 307 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + L+P++SL GS + F WS GP L LPIFD G K+N++ +E+ + Sbjct: 308 ARLFPTISLTGSAGYASTDLSDLFKSGGFVWSIGPSLDLPIFDWGTRKANVKISETDQKI 367 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++++V +A +EV +AL + + +T Q VE ++ +LS +R G S L Sbjct: 368 ALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNARFRAGIDSYLT 427 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R++ E L + ++ + ++LY +G G Sbjct: 428 VLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLGGG 463 >gi|222110696|ref|YP_002552960.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221730140|gb|ACM32960.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 502 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 118/472 (25%), Positives = 225/472 (47%), Gaps = 37/472 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESF-NDT 59 LR V +AGC G P LLP + + + +++D W F D Sbjct: 38 LRTGLLGICVTVAGCMAGVRTDVPSPALLPAAWPVPPVAFDDSTVSVDDQAEWGMFYRDP 97 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNS 116 +L LV+ AL+ N + A R++ A+ + A+ +P+ SH R +L + Sbjct: 98 TLQGLVRQALENNRDLRLAMLRVDEARAALGLQSAERWPTLAVGSSHTRARVPGDLNVSG 157 Query: 117 ---------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYID 166 G S+W++DL+G+ R +E++ A A+ A+ +++++ +Y+ Sbjct: 158 RAVTTGEHRVGLAISNWELDLWGRVRSLEAAAQQAYFASAEGSRAAQAALVNQVARNYLA 217 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +ERI++ + ++++ + + GA S+L+L ++E+ + ES L + Sbjct: 218 WRETQERIALTEDTIATRRESLRIFGRRHAAGAISRLALTQVESLLYQAESIGTQLAQQQ 277 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 + H ++ L+G P + Q + +P + G+P+DL+ RPDI E L Sbjct: 278 ALQAHALAQLVGVP------WDALALAPPQAAVALPTVPAGLPSDLLLRRPDIAAAEHTL 331 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A++ A++ +P ++L G+ + D F + W+F P + +P+FD G+++S Sbjct: 332 HAANARVQAARAAFFPRIALTTSAGTASAHLDGLFDSGSRAWTFAPSISVPLFDGGRLQS 391 Query: 343 NIRRAESSAQEQYIT---WQETVLNAIKEVENALTSINEDKKIVTKLQHAVE--LHKKSM 397 N+ + SA Q I +++TV A +EV +AL + + +T LQ A LH+++ Sbjct: 392 NL---DLSAARQNIAVADYEKTVQTAFREVSDALATRATAARQIT-LQQAQRDALHERA- 446 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + Y G ++LD +R E L A+ L +++ +Y A+G G Sbjct: 447 RLAQLRYDHGATPYFEVLDAQRDLLAAEQQLVQARYALQAAHIAVYAALGGG 498 >gi|148548880|ref|YP_001268982.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148512938|gb|ABQ79798.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 472 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 189/419 (45%), Gaps = 24/419 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW + D LN+ V+ AL N + QA + A I A +PS+ ++ + Sbjct: 59 RWWALYQDPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTAMGVAATYGR 118 Query: 110 ----PNLKTNSTGQLDSDWK----------IDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 L + S W+ +D++GQ R I+ + +++ A +D+ +L Sbjct: 119 SADDQTLAEATDSNAPSQWQFNPGIELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRL 178 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V+++ +YID + R+ A Q L +++LS + G + L +L + Sbjct: 179 QVVAQTTRAYIDQCTYAARLEAAKQALQTLDHSVQLSQRQRQAGVATALDGERLLGLREQ 238 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + +P L +M ++ +S L G + + ++ P L P+ G L+ Sbjct: 239 VRAQLPMLSARRQMALYELSMLSGQASV-----AEARTCVAIPTLSAPLPAGDGWHLLER 293 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 RPD+R E++L + + I ++DLYP +S S+ + N + GP + Sbjct: 294 RPDVRQAERELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGASRAVMFGIGPLIR 353 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + +AE+ + Q + L+A+K+V AL + +++ + L A+ Sbjct: 354 WEFPNLQANRARVSKAEALQRAQVARYHGVALSALKDVRQALARYDGERQRLQALDAALV 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S +L+ NYR G L +LD ER + + A+ +LA++ V+L+ A+G + Sbjct: 414 HSQHSFALAQGNYRAGTVDGLALLDSEREMISLRASHTEARGRLAQAQVNLFRALGGRW 472 >gi|309778794|ref|ZP_07673567.1| outer membrane efflux protein OprC [Ralstonia sp. 5_7_47FAA] gi|308922502|gb|EFP68126.1| outer membrane efflux protein OprC [Ralstonia sp. 5_7_47FAA] Length = 516 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 109/432 (25%), Positives = 203/432 (46%), Gaps = 47/432 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR- 107 WW+ FND +L+KL A + + T+ A R+N A+ + + RA LFP + + R Sbjct: 69 WWKIFNDPTLDKLEAQAAEASPTLAAAAARVNQARAFVQANRASLFPELDAGFGPTRQRA 128 Query: 108 --FIPNLKTNSTGQLDSDWK--------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 L + Q + W+ +DLFG+ R +I+++ A+ + A A+L++ Sbjct: 129 SAASAGLPVGAPVQPQTYWRAQSTVAYEVDLFGRVRNNIDAAGADAERVEALYRAARLSL 188 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + L ++ ++L +F G +L + + +AE+ + Sbjct: 189 QADVAQTYFSLRTLDAEEALLSRTLVGREEALKLVQRRFNTGDIGELDVARADAELATAR 248 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 SD +++ + H ++TLLG +F ++ Q + + + G+P+ L+ RP Sbjct: 249 SDRIGVQRRRAVLEHALATLLGKAPADFTM----GADPLQ-SAEVRVPAGLPSALLERRP 303 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH------------W 324 D+ E+ +A + A+IG+A++ +P L L G GY +H W Sbjct: 304 DVAAAERSMAAANARIGVARAAFFPQLQLTGGF---------GYESHDIGDLLKWGSRTW 354 Query: 325 SFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 GP L LPIFD G + +++A ++ +E ++E+VL A +EVE+ L+ + Sbjct: 355 ILGPLVGTALSLPIFDGGARSAGVKQARAAYEENVANYRESVLVAFREVEDNLSELRLLA 414 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSY 439 AV ++ LS Y G + LD++D ER E + + +A ++ S Sbjct: 415 DQAKAQDDAVRASTRAAQLSRTRYNAGSVNYLDVIDAERNMLSAERIGVQLAGSRM-NST 473 Query: 440 VDLYIAIGSGYN 451 V L A+G G+ Sbjct: 474 VGLIKALGGGWG 485 >gi|320106437|ref|YP_004182027.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319924958|gb|ADV82033.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 462 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 212/461 (45%), Gaps = 38/461 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 ++L GC+VGP Y P + P + + S +D +WW+ +D L+ +++ Sbjct: 13 LLLTVGCSVGPHYRSPRQQISQFHEAPPELTTSGS-----VDP-RWWQQLDDPILDSVIQ 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----IPN-------LKTN 115 +L+ N I + + + + D +P + S+ + +P + T Sbjct: 67 ASLKSNNDIAMSLAHLQEVRSIFDERKLDRYPVAPVDASYSYAREQVPGFFNKPATINTF 126 Query: 116 STGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG D+ W+ D+FG +H + ++ ++A A V K+++ +++ +Y R + R+ Sbjct: 127 RTG-FDAVWETDIFGGVKHGVAAAQHATEAAAADVQALKVSIAAEVAMNYFVIRSAQWRL 185 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + K + ++ + G + A + ++E+ IP LE + + IS Sbjct: 186 EVAQHTVSNQKDTLRVTQNRRDAGLGETQDVASAAARVAAVEATIPPLEFEIKRAQYRIS 245 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEKKLADSVA 290 L E + + P+ Y PI+ IG P +L++ RPD+ E++LA + Sbjct: 246 VLSNVKPGEL-------AVDLSPHAYQPISKMLAIGKPDELLQRRPDVLAAERRLAQASE 298 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A++ +P +S++ G +A F + S GP + FD G+ ++ +R A Sbjct: 299 TVGVARAQEFPQVSVSAFIGFLAGRGSTFFTPDSLGASVGPSISWSAFDLGRNRARLRGA 358 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ E +Q+ VL A++E E++ K + KL K++ ++ + YR+G Sbjct: 359 KANLDESTAAYQDIVLRALEETEDSFAEYRSQHKRLVKLMMQANESKRAADIARLRYREG 418 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L +LD ER + E ++ + + S V +Y A+G Sbjct: 419 VIDFLTLLDTERTELEAENGVATTEGEEYISIVRIYKALGG 459 >gi|188581702|ref|YP_001925147.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium populi BJ001] gi|179345200|gb|ACB80612.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium populi BJ001] Length = 515 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/418 (22%), Positives = 197/418 (47%), Gaps = 34/418 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLK---------------WWESFND 58 +GC VGP+Y++P + P F G + +L + K WW FND Sbjct: 35 SGCLVGPDYSRPSVET-PLGFKQGGMREDSLAYVQAQKGWRPAVPNDAAARGDWWRVFND 93 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTN 115 +L++L++ N + + A+ + RA LFP+ + R + +T Sbjct: 94 PTLDRLIRSIDVDNQNLRAQVAVYDQARALVAQARAALFPTVIGAPGITRSRALGAERTT 153 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + Q + W++DLFG RR IES +A+ ++ A + + +L++ ++L +Y+ R+ Sbjct: 154 VSLQGQASWELDLFGGIRRQIESDVASAQASAADLALVRLSLQAELATNYLQLRYQDSLK 213 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + ++ +K+++ ++ ++ G ++ ++ + ++++ ++ + ++ H ++ Sbjct: 214 RVLEENVEGFKRSLSIAENQYNAGVAARSDVITAQTQLQTTQASLIAVDLQRATFEHAVA 273 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L G P +E F P P + +GIP+DL+ RPDI E+ + +I Sbjct: 274 ILTGRPPSEV-------KLPFAPLPVRPPAVPVGIPSDLLERRPDIAGAERLVQAQSEQI 326 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A S +P+++L+ S + T + F N WS FD G + ++ A + Sbjct: 327 GVAVSAFFPTVTLSASGGISGATSNGVFSAANRVWSIAANGSQVFFDGGARAAVLQTARA 386 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + +++TVL A EVEN L + + K AV ++++ +++ YR G Sbjct: 387 AYEAAVANYRQTVLTAFGEVENGLAGVRILGRQQAKQDEAVASARRAVEITLNEYRAG 444 >gi|213970268|ref|ZP_03398398.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] gi|301382926|ref|ZP_07231344.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302063780|ref|ZP_07255321.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302133533|ref|ZP_07259523.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924940|gb|EEB58505.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] Length = 486 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIETALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQSAISSSYSATLGVSAYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVANVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARARLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTGLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILQAEHSLKAANANIGAARAAFFPSISLTASAGTSSTELSGLFKGGSGTWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++++ A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKSIQTAFQEVSDGLASRKTYDEQLQAQRDFVTANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|33592136|ref|NP_879780.1| outer membrane lipoprotein [Bordetella pertussis Tohama I] gi|33571780|emb|CAE41287.1| probable outer membrane lipoprotein [Bordetella pertussis Tohama I] Length = 460 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 108/463 (23%), Positives = 215/463 (46%), Gaps = 31/463 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPL---LPT----QFSIGNSKNLINIDTLKWWE 54 ++R + SL + LAGC++ P Y +P P+ P+ + + W + Sbjct: 5 VMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRD 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F D L +L+ ++L N + A + AA+ N PS A IS + Sbjct: 65 FFGDPLLQELLALSLANNRDLRVAALNVEAARLN---------PSGQAGISRSY------ 109 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKER 173 G S W++DLFG+ R + L A + +A +L ++++ +Y R +E Sbjct: 110 -QVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYPTLRADQEL 168 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++ Q L +++ +L+ + G ++L L + E +++ E ++ + + + + Sbjct: 169 LALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNAL 228 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G P + Q+ + + + G+P+DL+ RPDIR E +L + A I Sbjct: 229 VLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASI 288 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G A++ +P +SL GS A T S G + WSF P++ +PIF G +++++ A+ Sbjct: 289 GAARAAFFPRISLTGS-AGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAK 347 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++ + + +EV +AL ++ + + V+ ++++ LS Y+QG Sbjct: 348 IQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGI 407 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L +LD +R+ + L + + + LY A+G G++ Sbjct: 408 DNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWS 450 >gi|264676483|ref|YP_003276389.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262206995|gb|ACY31093.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 477 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 103/451 (22%), Positives = 212/451 (47%), Gaps = 14/451 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L +GC+ P +P P+ + + W + + D L +++++AL+ N Sbjct: 14 LLASGCSFIPTLERPAAPVAEHYSATDEQAGATAAADIPWQQFYTDPRLQQVIQLALENN 73 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKI 126 + A I A+ RA FP + S P+ T G W+I Sbjct: 74 RDLRVAVLNIEKAQAQYQIQRAGQFPEFGVAGSASRQPSATTGRYANSYMVGLSMPSWEI 133 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D +G+ + + +LA + A++++I+ + ++++ + +E ++I+ + L + Sbjct: 134 DFWGRIGSLKQQALAQYLATEEGRKAAQISLIATVANTWLNLQADEELLAISRRTLGTRE 193 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--YPATE 243 ++I+L+ L+ G S+L + ++ +S + + +V+ ++ L+G PA + Sbjct: 194 QSIKLTKLRLDSGVASELDYRQAQSLTESARATLAQQAGQRERDVNALTLLVGQTLPA-D 252 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L MQ + P L + G+P+DL+ RPDIR E+ + + A IG A++ +P++ Sbjct: 253 LLTSMQGKQLRDLPAL-ADVPSGLPSDLLLRRPDIRQAEQSMIAANASIGAARALFFPNI 311 Query: 304 SLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL S + + ++ P LYLPIF+ G+ ++N++ AE+S + ++ Sbjct: 312 SLTASAGFASSDISDLLKSDSAAFTIAPSLYLPIFNAGRNRANLQVAEASQKIAVAQYEG 371 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ +A +EV + L + K + +E + LS + Y G S LD+LD +R+ Sbjct: 372 SIQSAFREVSDTLVNRQALKDQLDAQSRQLEAEQVRYKLSDLRYTNGVASYLDLLDAQRS 431 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +E + + ++ V+LY +G G+ Sbjct: 432 LFALEQSVVQVRLAQLQNQVNLYKVLGGGWT 462 >gi|295699499|ref|YP_003607392.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295438712|gb|ADG17881.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 497 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 110/476 (23%), Positives = 214/476 (44%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI---DTLKWWESFNDTSL 61 R + LF L C P+Y +P +P+ F + N + W F D L Sbjct: 12 RLLLPLFCCSLGACNFAPKYQQPSLPIA-DHFDTTETANPATAHLASEVDWQTFFADPQL 70 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFI 109 L++ AL+ N + + RI A+ A P + SI F Sbjct: 71 KLLIEAALEHNRDLAASIARIEQARAFYRIQNAARLPQVNANAGATRTKAPLGSIDPEFD 130 Query: 110 PNLKTNSTGQLD--------SDWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNV 156 T+ + Q + + +++D +G+ R+ + LA +++ +A +L++ Sbjct: 131 ---NTDISVQFNQYNVQAAVTSFELDFWGRVRNTSEAARRRYLATIEAQHA----FRLSL 183 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I + +Y R E I++A Q LD + ++++ ++ G TS + + + + Sbjct: 184 IGNVASNYYAIRSGDEGIALAQQTLDSRRYALDVAKMRLDAGVTSSVDYDQAAILVTQAQ 243 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + L+++ + + L+G P E L ++ Q + ++ G+P+ L+ +RP Sbjct: 244 TQLAELQRTTAQQRNLLEVLIGGPLNESLPQAPPIADAAQ---FRELDAGLPSALLIDRP 300 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLP 333 DI+ E++L + A IG A++D +P ++L GS ++ + F WSFG + +P Sbjct: 301 DIQQAEQQLRAANADIGAARADFFPRIALTGSFGYVSAELGDLFVPAKQAWSFGALVGMP 360 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ ++ + +A + E +Q TV NA +EV +AL + K+ + + AV+ Sbjct: 361 IFDAGQRQAQLAQARARRDELVADYQRTVQNAFREVSDALVARQRYKEQIAAQEQAVQAQ 420 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ + + Y G L+++D R E L + ++ V LY+A+G G Sbjct: 421 RQLAETAELRYENGISIYLEVVDARRNQFAAEQQLIQLRATALQNGVSLYVALGGG 476 >gi|308048906|ref|YP_003912472.1| RND efflux system, outer membrane lipoprotein, NodT family [Ferrimonas balearica DSM 9799] gi|307631096|gb|ADN75398.1| RND efflux system, outer membrane lipoprotein, NodT family [Ferrimonas balearica DSM 9799] Length = 485 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 114/477 (23%), Positives = 216/477 (45%), Gaps = 44/477 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++LAGC+V PEY P P F + ++ + +WW+ +ND LN LV QQ Sbjct: 11 LVLAGCSVTPEYQAPQAP--EQAFYLHQAQADTTQSPQAQWWQRYNDPELNALVAAVQQQ 68 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------------IPNLKT 114 N+ + A RI +A+ +V P+ ++ +P+L Sbjct: 69 NIPLQVAQVRIESARAYRTAVATTRIPTISVGAGYQHYRLSEYDPLAGGALTATMPDLGQ 128 Query: 115 NSTGQ----LDSD-----------WKIDLFGQRRHIESSLANLDSAYAQV-DIAKLNVIS 158 GQ LD D W++DL G+ + + ++LA + A++ LN+++ Sbjct: 129 PGAGQPLNLLDRDNGAFVVGANISWELDLAGRLKGM-NTLAGIRLEQAEILRQGTLNMVT 187 Query: 159 -KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 I +Y+ R + RI+IA + + + ++ G S L + EA + + + Sbjct: 188 MDAIHNYLQYRGAQARIAIAERNVAEQQATLDQVRSLVASGYGSSLDQAQAEALLAATRA 247 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 +P L + + ++H ++TLLG E Q+ S P++ + +G+ ++L++ RPD Sbjct: 248 TLPMLHSAEQAHLHRLATLLG---EEITTTGQRFSTRALPDIQGQVPVGLKSELLKRRPD 304 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPI 334 I E+++A ++GIA + YP + L GS +A + F + W + + Sbjct: 305 IALAEREMAALNEEVGIAIAARYPKVYLTGSPMTLAENFGDLFRSGSDAWLASAGVQWTL 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ ++ + E+ Q+ +++Q+ V A EVE AL + + +++ A + Sbjct: 365 FDGGRGQALVEMQEARFQQAALSYQQQVNQAFNEVETALMAYGNQQTHREQVEQAASHAR 424 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + S + YR G L +LD +R +E +A+ A+ + L A+G + Sbjct: 425 TAASKARALYRAGLVDYLAVLDAQRQVNLMEDAELVARLSSAEHLLYLNKALGGDWT 481 >gi|33596110|ref|NP_883753.1| outer membrane lipoprotein [Bordetella parapertussis 12822] gi|33573113|emb|CAE36757.1| probable outer membrane lipoprotein [Bordetella parapertussis] Length = 488 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 113/478 (23%), Positives = 222/478 (46%), Gaps = 33/478 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPL---LPT----QFSIGNSKNLINIDTLKWWE 54 ++R + SL + LAGC++ P Y +P P+ P+ + + W + Sbjct: 5 VMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRD 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIP 110 F D L +L+ ++L N + A + AA+ RADL PS S+ R Sbjct: 65 FFGDPLLQELLALSLANNRDLRVAALNVEAARAQYRIQRADLAPSVGVGGTGSV-QRTPA 123 Query: 111 NLKTNSTGQLD-----------SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVIS 158 +L N +GQ S W++DLFG+ R + L A + +A +L +++ Sbjct: 124 DL--NPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVA 181 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+ R +E +++ Q L +++ +L+ + G ++L L + E +++ E + Sbjct: 182 ETANAYLTLRADQELLALTRQTLVAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERN 241 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPD 277 + + + + + L+G P + Q+ + + + G+P+DL+ RPD Sbjct: 242 LSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPD 301 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLP 333 IR E +L + A IG A+ +P +SL GS A T S G + WSF P++ +P Sbjct: 302 IRAAEHQLQAANASIGAARVAFFPRISLTGS-AGTASASLGGLFDAGSGAWSFAPQISVP 360 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G +++++ A+ +++ + + +EV +AL ++ + + V+ + Sbjct: 361 IFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQAN 420 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ LS Y+QG + L +LD +R+ + L + + + LY A+G G++ Sbjct: 421 QRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWS 478 >gi|37588896|gb|AAQ94111.1| outer membrane protein [Burkholderia pseudomallei] Length = 532 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 207/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A+ QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQHQLISARLARWTNLVDLYRALGGGW 475 >gi|242280511|ref|YP_002992640.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio salexigens DSM 2638] gi|242123405|gb|ACS81101.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio salexigens DSM 2638] Length = 498 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 110/466 (23%), Positives = 225/466 (48%), Gaps = 29/466 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 L AI L + L+ C+ +P++ L +P Q+ + +S+ + KWWESF++ LN Sbjct: 8 LTAICMLALFGLSACSPFRPDPRPNLTLGVPPQYELYSSEPR---ELGKWWESFHNEELN 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ 119 +LV+ + N + A ++ + + +ADL+P ++ R + S G Sbjct: 65 RLVEEGINANFDVRVAWAKLRQLRATAVKSKADLYPKLDGKGTYTNSRSGNDGTEGSKGS 124 Query: 120 LDSD---------WKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDAR 168 +D +++DL+G + E++ LD S+ V+ A + V S+++ +++ + Sbjct: 125 TSTDSHKLGLAASYELDLWG-KIEAEAASGELDYLSSREDVNSAAMTVASEVVKRWLEIQ 183 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +++ +I + L+ + +EL L+F ++ L + + + ++ IP +E ++ Sbjct: 184 LQRKKKAIYQKQLETNETYLELIELRFRNSLSTALDVFQQRETVARTKALIPPVESQEQL 243 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +H ++ LLG PA + + +F P+L +GIP DL+ RPD+R L + Sbjct: 244 KLHELAYLLGRPA----GAIDVATADF-PDLPNLPGLGIPLDLLSMRPDVRAAGLDLQSA 298 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A++D PS++L+ L+ N F G+ T + + PIFD K K+ + Sbjct: 299 DWSVSAARADRLPSMTLSAEAMLSSAQLANIFSGWLT--TLTSSITGPIFDGYKRKAEVE 356 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 R + E+ + +++TV A KEV+++L + ++ ++ +E K ++ + Y Sbjct: 357 RTRAVVDERMLNYKDTVFTAFKEVQDSLVQEKWQHEYISARKNQLEAAKLNLQEAGSRYL 416 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 QG L +L + +E++++ + L V LY A+G + Sbjct: 417 QGLEDYLPVLSALVSVHDLEINIAQDEADLLSYRVGLYRALGGTWT 462 >gi|294341537|emb|CAZ89954.1| putative RND efflux system outer membrane lipoprotein NodT [Thiomonas sp. 3As] Length = 500 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 216/481 (44%), Gaps = 48/481 (9%) Query: 8 FSLFIVLLAGCT-VGPEYTKPHMP--------LLPTQF-----SIGNSKNLINIDTLK-- 51 +L LL GCT VGP++ P P LP Q ++G ++ ++ + Sbjct: 13 IALGAALLGGCTTVGPDFHTPRAPSVQQYTREALPAQTASAPGTLGGAQRFQTVERIAPD 72 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + + L+ LV A + + T+ A + A++ + Y +++ + N Sbjct: 73 WWRVYGSSRLDSLVDAAQRSSPTLAAAEATLRQAQQTYQAQAGSTL---YPTVNGKLGAN 129 Query: 112 L-KTN--STGQLDS--------------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 +TN S GQ S ++ DLFG RR +E+ A D Q+ AK Sbjct: 130 RNQTNAASVGQSSSATNIFNLYNASIAVNYNFDLFGGNRRALEALAAQADYQQYQLQGAK 189 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + + ++ + +I IL + ++++ +F GA ++ ++ LE +++ Sbjct: 190 LTLAANVVTAAFTQAQLGAQIDATETILKAQQNQLDIARKRFALGAAARTDVLTLETQVE 249 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +P L H ++ LLG A + + +F +P+ +P+ L Sbjct: 250 QTRASVPPLRNKLEQTDHLLAVLLGQAPGAADIPRFTLA---DFTLPQTLPVV--VPSAL 304 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 ++ RPD++ + L + A+ G+A S+LYP ++L+ S+ ALT F + WS Sbjct: 305 VQQRPDVQASQALLHAATAQYGVAVSNLYPQINLSASLGTQALTMGALFGPGSAVWSLAG 364 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F+ G +K+ AE+S Q +Q+TVL A++ V +AL +++ D + + Sbjct: 365 SLAQPLFNAG-LKAGANAAEASLQAAGANYQQTVLQALRNVADALRALDNDAQTLQAQAA 423 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A ++S+ L Y G S L +L ++ + + L A+ Q LY A+G Sbjct: 424 ADTAAQESLKLVDQQYLLGAASYLQLLTAQQQAQQTRIGLISAQAQRLADSAALYQAMGG 483 Query: 449 G 449 G Sbjct: 484 G 484 >gi|126457707|ref|YP_001075533.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 1106a] gi|242311982|ref|ZP_04810999.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106b] gi|126231475|gb|ABN94888.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106a] gi|242135221|gb|EES21624.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1106b] Length = 512 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 207/468 (44%), Gaps = 44/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 18 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 78 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 137 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + W++DLFG+ + + + +LA + A++++++ + Y+ + Sbjct: 138 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLSTDD 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + L + + +L+ L+F G S+L L + + +++ + ++ ++ Sbjct: 198 LLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNA 257 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A I Sbjct: 258 LVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANI 314 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A Sbjct: 315 GAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHV 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +++ + +A +EV + L + + + L+ ++ LS + YR G Sbjct: 375 QKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVD 434 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 S L +L + DL A+ QL + VDLY A+G G+ Sbjct: 435 SYLSVL-------TAQTDLYSAQHQLISARLARWTNLVDLYRALGGGW 475 >gi|295700560|ref|YP_003608453.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295439773|gb|ADG18942.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 505 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 118/478 (24%), Positives = 212/478 (44%), Gaps = 51/478 (10%) Query: 13 VLLAGCTVGPEYTKPHMPL--------LPTQFS-----IGNSKNLINIDTL--KWWESFN 57 V LAGC VGP+Y P P LP Q + G + + WW F+ Sbjct: 21 VALAGCMVGPDYHPPPAPATDIFTARPLPDQTASAPGPAGLPQRFAPAQDIPAAWWTLFH 80 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASIS--HRFIPNLKT 114 L+ L++ A+ + + A + A+EN + L PS A +S I + Sbjct: 81 CEPLDALIREAIANSPNMTAAQAALRQARENYTAQAGGTLLPSVDAQLSATREKINGIAF 140 Query: 115 NSTGQLDS----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 G ++ +K+D+FG RR +E+ A +D Q+ A L + + ++ + Sbjct: 141 GEPGLVEEFNLYNASVNVSYKLDVFGGARRELEALHAQIDYQRFQLQAAYLTISANIVTA 200 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + + +I +I ++ + + + + G S+ +++ E + + +P L Sbjct: 201 AVKEASVRAQIDATERIATEEEQQLNVLDQQLSLGGVSRAAVLAQETLLAQTRATLPPLY 260 Query: 224 KSFRMNVHNISTLLG-YPA----TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + H ++ L G P+ EF M F +P+++ P+ L+R RPDI Sbjct: 261 QQLDQARHQLAVLAGKLPSDTGVPEFTLDM------FSLPDTLPVSL--PSSLVRQRPDI 312 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 + L + A++G+A + +YP ++L+ G+ ALT +T WS G L P+F Sbjct: 313 LAADATLHQASAQVGVATAAMYPQITLSASYGAEALTPAQVLRAGSTIWSIGAGLLQPVF 372 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G++ + R AE++ ++ ++ETVL A + V + L ++ D + A Sbjct: 373 HGGQLSAQKRAAEAAYEQAGAQYRETVLLAFQNVADTLRALEHDATGLKAQTDASRAASD 432 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 S+ L+ YR G S L +LD +R + V L+ A+ A Y D L+ A+G G+ Sbjct: 433 SLELTRGQYRVGGVSYLALLDAQRQYQQTVVSLAQAQ---AARYADTAALFQALGGGW 487 >gi|239814743|ref|YP_002943653.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239801320|gb|ACS18387.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 509 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 122/501 (24%), Positives = 225/501 (44%), Gaps = 53/501 (10%) Query: 1 MNILRAIFSL--FIVLLAGCTVGPEYTKPHMPLLPTQFSI--GNSKNLINIDTLKW---- 52 M+ R +FS +LLAGC VGP++ +P P P +S G S L+ + Sbjct: 1 MSASRTLFSCSALALLLAGCAVGPDH-RPAQPQAPADWSAWHGGSAALLGAERKAAPTAA 59 Query: 53 ----WESFNDTSLNKLVKIALQQNLTI------------------------LQATERINA 84 W++F D L++L AL N + L A+ +N Sbjct: 60 ASGDWKAFGDPLLDQLQARALAANHDLQTAALHFAQSRVQRTAAAAQQAPQLNASASVNR 119 Query: 85 AKENILSVRADLFPSSYASISHR--FIPNLKTNST---GQLDSDWKIDLFGQ-RRHIESS 138 +++ + + +S+++R I L D+ W+IDL+G+ RR IE++ Sbjct: 120 QRQSESGAATRMIDALGSSVANRDQLIRTLSEPYNLYQAGFDASWEIDLWGRVRRSIEAA 179 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A+ ++ A + A+L+V +++ SY + R + + +A+ + +++EL + G Sbjct: 180 DADAGASAALLQQAQLSVQAEVARSYFELRGAQRELRVANADIAAAAESLELVQARADGG 239 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF---LHYMQKQSNNF 255 + L + ++ +++ IP L + ++ I+ L G L + N Sbjct: 240 LVTDLDPTRQRTQLAELKARIPMLLQQEAQAMNQITLLTGAAPGALNAELAPASDGAGNP 299 Query: 256 QPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 L P + +G+P D++R RPDI E +L + A+IG+A +DLYP ++L Sbjct: 300 LEALQAPPLPELALGLPGDVVRRRPDIAAAEAQLHAATARIGVAVADLYPRVTLGAGFGY 359 Query: 312 THDNS--FPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 S F + + W GP + LPIFD + +S + E QE + +Q+ VL A E Sbjct: 360 ESAGSERFGEWGSRQWHVGPSISLPIFDNDRRRSTVNLRELQQQEAAVAFQQAVLKAWHE 419 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 +++AL++ +++ +L + +++L+ Y G LD RA + D Sbjct: 420 IDSALSAYAAERQRHAELAERERSSRDALTLAHARYANGLTDFGVELDARRALLQARRDQ 479 Query: 429 SIAKRQLAKSYVDLYIAIGSG 449 + ++A V +Y A+G G Sbjct: 480 VQSTSRMAVGMVAVYKALGGG 500 >gi|53721329|ref|YP_110314.1| multidrug efflux system lipoprotein [Burkholderia pseudomallei K96243] gi|52211743|emb|CAH37742.1| putative multidrug efflux system lipoprotein [Burkholderia pseudomallei K96243] Length = 510 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 211/470 (44%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVVVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|85710486|ref|ZP_01041550.1| RND efflux system outer membrane lipoprotein NodT [Erythrobacter sp. NAP1] gi|85687664|gb|EAQ27669.1| RND efflux system outer membrane lipoprotein NodT [Erythrobacter sp. NAP1] Length = 481 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 113/448 (25%), Positives = 204/448 (45%), Gaps = 21/448 (4%) Query: 17 GC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC T P + +PL P +++ + + I+ ++W ND +++ V A QN Sbjct: 26 GCSLPGTAQPPTLQETIPL-PERWTFASQEGQA-IELGEYWALLNDPLIDEFVTQARTQN 83 Query: 73 LTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLDSD--WKIDL 128 I Q+ ++ AA+ + RA PS+ A + F + L +D W++DL Sbjct: 84 YDIAQSLAQLRAAEAGLREARAARLPSASAGGGVGRDFGDFSRDEFQFSLSADLAWELDL 143 Query: 129 FGQ-RRHIESSLANLDSA-YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 FG+ I++S A+L +A + D+ ++ V++ + I AR ++ A Q L Sbjct: 144 FGRISSSIDASRADLAAAGFNAADLERI-VVATVAIQTITARSVAAQLEFARQSLANQDD 202 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE-FL 245 N++++ + G S L + + + + IP LE + ISTL+G P E + Sbjct: 203 NLQIARWRNQAGLVSSLDVEQARTQRAQTAATIPLLEGDLVAAANAISTLIGDPPGEVYA 262 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + P L +N PAD++R RPD+ E +L +IGIA++ LYP L Sbjct: 263 RLLADPREVPSPPLANAVNA--PADILRMRPDVSAAEARLVGDFERIGIARTQLYPIARL 320 Query: 306 NGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 G++ + D+ F T F L +FD G ++ + + + A W++++ Sbjct: 321 TGTVGTSSFGIDDLFD-VITGNVFA-SLSQLLFDGGAARARVDASRAIADGSLAAWRQSI 378 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A+++VE A ++ + V L A + + + L Y+ G +L++E A Sbjct: 379 LTALEDVETASVDLDTSNERVIALVEASDGARNAAILGRSQYQAGLIDFQVLLNVESALL 438 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E A+ A ++V L A+G G+ Sbjct: 439 SAETSQISAEAARAIAFVQLARAMGGGW 466 >gi|16125059|ref|NP_419623.1| efflux system protein [Caulobacter crescentus CB15] gi|221233786|ref|YP_002516222.1| outer membrane efflux protein [Caulobacter crescentus NA1000] gi|13422053|gb|AAK22791.1| efflux system protein [Caulobacter crescentus CB15] gi|220962958|gb|ACL94314.1| outer membrane efflux protein [Caulobacter crescentus NA1000] Length = 467 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 116/466 (24%), Positives = 213/466 (45%), Gaps = 31/466 (6%) Query: 8 FSLFIVL---LAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNK 63 F+L +V + CT+ P+Y +P +P+ T + + ++ L W + D L Sbjct: 5 FTLILVASTAVGACTLAPQYERPVLPVAQTWSTPAPEAATTVSAADLDWRQVLVDPRLQG 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNSTGQ-LD 121 +V +ALQQN + A I A+ R+ LFP ++S R T+ TGQ + Sbjct: 65 VVDLALQQNRDLRVAVLNIEKARAQYGVQRSALFPGVSGAVSEQRGRTPASTSPTGQPFE 124 Query: 122 SD----------WKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDAR 168 +D +++DLFG+ R ++ A L S A ++ +++I+++ +++ Sbjct: 125 TDVFNATIGFTAYELDLFGRVRSLKD--AALQSYLATEQTSRSVRVSLIAEIANAWLTLA 182 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+++A L + ++ L + GA S L L E ++ +D+ Sbjct: 183 ADQERLALAKTTLATREDSLRLVRQRVDGGAGSLLDLRNAETLAETARADVAVYTAQVAQ 242 Query: 229 NVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + ++ L G P + L + +++ +L G+P+D++ RPD+ E++L Sbjct: 243 DRNALTLLAGGDLP-VDLLPPGRLDADSVLADL----PAGLPSDVLARRPDVLAAERQLQ 297 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P +SL GS D F + WSF P++ LPIF G +N Sbjct: 298 AANANIGAARAAFFPRISLTGSAGSASTDLDGLFKSGTSIWSFTPQISLPIFAGGANVAN 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +++ T+++TV A +EV +AL+ +T + S LS Sbjct: 358 LNISKADRDIAVATYEKTVQTAFREVSDALSVRATVADRLTAQERLTAAAADSTRLSQQR 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S L +LD +R+ + L A+ A + V LY +G G Sbjct: 418 RDAGLDSALTLLDAQRSLYTAQQGLISARLAQATNLVTLYKTLGGG 463 >gi|71153378|sp|Q93PU3|TTGI_PSEPU RecName: Full=Toluene efflux pump outer membrane protein ttgI; Flags: Precursor gi|14582626|gb|AAK69565.1|AF299253_5 outer membrane efflux pump component TtgI [Pseudomonas putida] Length = 470 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 215/464 (46%), Gaps = 32/464 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVK 66 +++L GC++ P+Y +P P+ PT + G + +I T K E F D +L +L+ Sbjct: 11 LLMLGGCSLIPDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKDPALVRLLD 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN-LKTNSTGQLDSD 123 AL+ N + A + + + + RA+ FP+ AS + +P+ L ++DS Sbjct: 71 AALENNRDLRIAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPTGDSRIDSQ 130 Query: 124 WKI--------DLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +++ DLFG+ R + E LA + A V IA +I + +Y R Sbjct: 131 YQVGLVTAYELDLFGRIRSLSNQALEKYLAT-EEAQRSVQIA---LIGDVATTYFLWRTD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + L Y +++ + G +S+L + + + ++ + +V Sbjct: 187 QALLELTEATLTSYVESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDV 246 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + LLG L +++ + + G+PADL+ NRP IR E +L + A Sbjct: 247 NALELLLGSKIPTDL----PKNSPLAMSALGKVPAGLPADLLLNRPRIRSAEHQLMAANA 302 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL GS + D F + WSF P++ +PIF+ GK+++N+ A Sbjct: 303 NIGAARAAFFPRISLTASAGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANLDYA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E T+++++ A +EV + L + K ++ V+ +K SL+ Y QG Sbjct: 363 ELQKDVGVATYEKSIETAFREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRYDQG 422 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L +LD +R + L + S V LY A+G G++ Sbjct: 423 VDSYLTVLDAQRELFSSQQKLLNDQLDQINSEVQLYKALGGGWS 466 >gi|328470187|gb|EGF41098.1| putative outer membrane protein [Vibrio parahaemolyticus 10329] Length = 500 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/479 (24%), Positives = 223/479 (46%), Gaps = 50/479 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNL 73 LAGC VGP+Y P + T + N+ + ++ WW F+D LN++V+ QN+ Sbjct: 15 LAGCVVGPDYQAPTTSMAETYLNAENAGLSTDSQPVEFWWTKFHDPVLNQMVQDMQSQNI 74 Query: 74 TILQATERINAAKENILSVRADLFPS---SYASISHRFIPN----------LKTNSTG-- 118 + A ER+ A V + P+ ++++F N L + +G Sbjct: 75 PLKVAAERVKMANNYKTMVESFKVPTINLGAGYMNYQFSKNDSSLGPILNPLSDSVSGLP 134 Query: 119 -----------QLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--S 158 Q D W+ DLFG R +++ A + AQ+ + LN + + Sbjct: 135 PQIGNVTLMDNQHDGVFAGASIAWEADLFG-RIDRQANAAQIRLEQAQIYQSGLNTVITA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 LI +Y+ + ER+ +A L+ ++ ++L G S L L + +A + ++ES Sbjct: 194 DLIHNYLQYQGASERLELAKSNLEDQRRTLDLVEKVVRSGYGSDLDLAQAKATLAAMESL 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R DI Sbjct: 254 VPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHS--VPVMQDMVPVGLPSDLLKRRTDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + +D YP L G+ L + D+ F + W + +F Sbjct: 312 RLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSWNLF 371 Query: 336 DKGKIKS----NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 D G+ ++ N R +S+ +++Q TV A+ E E+ L + ++ ++ A++ Sbjct: 372 DGGRGEAIEAINQARFDSAT----LSYQHTVEAALAETESTLFTYGRSQENQRRIDDALK 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + YR G L +LD +R ++ AK Q A++ + LY ++G + Sbjct: 428 ATNNAVNKAKSLYRTGLIDHLSVLDAQRQQRMMQDQQVAAKLQTAQATIALYKSLGGDW 486 >gi|94969859|ref|YP_591907.1| RND efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] gi|94551909|gb|ABF41833.1| RND efflux system, outer membrane lipoprotein, NodT [Candidatus Koribacter versatilis Ellin345] Length = 520 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 112/482 (23%), Positives = 226/482 (46%), Gaps = 51/482 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI---------------DTL---K 51 L + L+ C VGP+Y KP + P+ S D + K Sbjct: 15 LAMACLSACVVGPKYHKPAVDAPPSYKEATPSAQSAQPAPGAPAPTWQPASPNDAMLKGK 74 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WWE +ND LNKL + N ++ A A+ + RA FP+ S S Sbjct: 75 WWEIYNDADLNKLEEEVNVSNQSVKAAEASFLGARALVKQARAAYFPTIGVSPSITATRQ 134 Query: 112 LKTNSTGQL------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 L +S G++ ++ W D++G+ R + + + + A ++ +L++ Sbjct: 135 LSVDSNGKVTGGTGTDFDFPANAAWVPDIWGKVRNQVRAQASAAQMSAADLENIRLSLQV 194 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE-- 216 ++ +Y R + + Y+++++L+ + G S+ S+++ E ++ + + Sbjct: 195 EVANNYFQLRSQDALKDLLDATVKAYQESVDLTQALYETGIDSQESVLQAETQLATAQAQ 254 Query: 217 -SDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++ L + H I+ L+G PA++F L ++ S P+ I IG+P++L+ Sbjct: 255 DTNVGILRAQYE---HAIAMLIGKPASQFSLAHLPLSSE--PPS----IPIGVPSNLLER 305 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPK 329 RPDI E+ + S A IG+A + YP+++L+G+ + + ++P + +WS GP+ Sbjct: 306 RPDIASAERSMEQSNALIGVAVAAYYPNVTLSGTFGFRNTSIADWFTWPSH--YWSVGPQ 363 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L IF+ G K+ + +A++ + +++TVL A ++VE+ L ++ + V + A Sbjct: 364 LAQTIFEGGLRKATVVQAQAQYDQSVANYRQTVLTAFQQVEDNLAALRILSQEVQQQAAA 423 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ +K+++L++ Y+ G L++L + + L K Q + L A+G G Sbjct: 424 VDFAQKNLNLAIDRYKLGIDPYLNVLTAQTTLFSNQQGLVQLKLQQMNASAQLIEALGGG 483 Query: 450 YN 451 ++ Sbjct: 484 WD 485 >gi|329115398|ref|ZP_08244152.1| Antibiotic efflux pump outer membrane protein ArpC [Acetobacter pomorum DM001] gi|326695377|gb|EGE47064.1| Antibiotic efflux pump outer membrane protein ArpC [Acetobacter pomorum DM001] Length = 490 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 114/482 (23%), Positives = 219/482 (45%), Gaps = 41/482 (8%) Query: 4 LRAIFSL----FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESF 56 +RA F L LL GCT+ P Y +P P+ T S G+ DT W + + Sbjct: 1 MRASFLLHGIALTALLGGCTMIPHYHRPAAPVSTTWPSSGDHPTQTQDDTALMQDWRDFY 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------------SSYA 102 D + L+ AL+ N + A ++ AA A LFP S Sbjct: 61 RDPVMQTLIATALENNRDLRIAQQQTAAASSQFDIENAALFPTLNGTAGANVQKMNSHIW 120 Query: 103 SISHRFIP-NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD----SAYAQVDIAKLNVI 157 S+S P ++ + G S +++DL+G+ R +S A+ D SA Q + +L++I Sbjct: 121 SLSRTDEPIYMRQYAVGFGVSAYEVDLWGRIR--SASRASFDRYMASALNQQSM-RLSII 177 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + + ++ + +++ +L ++ +L G ++L + + E+ + +E+ Sbjct: 178 SSVATAMLNWVANAQALTLTQAVLANRQRTYDLVRQTADVGTGTQLDVAEAESALHDVET 237 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-----YIPINIGIPADLI 272 ++ + + ++ L+G P L QS N + +L + + G+P+++I Sbjct: 238 NVEIYTRQKAEAFNQLTLLVGMP----LPDATVQSLNAKASLEAVSAFPEVPEGLPSEMI 293 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK 329 RPDIR E L + IG A+++ +P + + NG+ + F W+ P+ Sbjct: 294 ARRPDIRAAEADLRAANDDIGAARAEFFPKIQITAANGTASNNITRLFQSGMGAWNVAPQ 353 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LP+FD G++ + +++A S E+ +++TV +EV +AL ++ + Q A Sbjct: 354 ITLPLFDAGRLTAQLKQAHSRKSEEVARYEKTVQQGFREVADALIGRETYERQTSAQQKA 413 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V +++ +L++ Y G L+ L +RA ++ + Q + V LY +G G Sbjct: 414 VAANQRQYALALQRYTAGYDPYLETLVAQRALYTAQLSAITTQLQTLSNSVTLYKVLGGG 473 Query: 450 YN 451 +N Sbjct: 474 WN 475 >gi|167923947|ref|ZP_02511038.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei BCC215] Length = 480 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 42 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 101 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 102 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 158 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 159 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 218 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 219 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 273 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 274 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 333 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 334 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 393 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 394 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 453 Query: 448 S 448 Sbjct: 454 G 454 >gi|124268147|ref|YP_001022151.1| putative outer membrane drug efflux lipoprotein [Methylibium petroleiphilum PM1] gi|124260922|gb|ABM95916.1| putative outer membrane drug efflux lipoprotein [Methylibium petroleiphilum PM1] Length = 487 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/419 (23%), Positives = 195/419 (46%), Gaps = 17/419 (4%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISH 106 L W E F D L + +++AL N + A I A+ RADLFP+ AS + Sbjct: 62 LAWREVFVDAPLQRTIELALSNNRNLRVAALNIEQARAQYQIQRADLFPTVAASGEAVHQ 121 Query: 107 RFIPNLK---------TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNV 156 R +L T S G S +++DLFG+ R++ E +L + ++++ Sbjct: 122 RTPADLSQAGRAVTSHTYSAGIGFSTYELDLFGRVRNLNEQALQQFFATEEARRSTQISL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++++ Y+ A E + +A L+ + + L+ G S L L + + ++ Sbjct: 182 VAEVANVYLTATADGELLRLARDTLESQESSYRLAQRSHELGVASALDLRQAQTSVEVAR 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNR 275 +D+ ++ +++ ++ L+G P L Q + + + + G+P+++++ R Sbjct: 242 ADVARYTRALAQDLNALALLVGGPLPAELRPGSVQPEDLRWIDRLAELPSGLPSEVLQRR 301 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYL 332 PD+ E++L + A IG A++ +P ++L S + + F G WSF P++ L Sbjct: 302 PDVLQAERQLQAANATIGAARAAFFPRIALTASAGVASSSLSDLFQGSARTWSFVPQVSL 361 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD G+ ++N+ +++ ++ + +A +EV +AL + + Q V+ Sbjct: 362 PIFDAGRNRANLEVSKTQRDIALAQYELAIQSAFREVADALAARGTFDAQLAAQQALVDA 421 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS YR G S L +LD +R+ + L + + + V LY +G G+ Sbjct: 422 TGETFRLSQARYRSGVDSYLAVLDAQRSLYAAQQSLITLRLSRSANLVTLYKVLGGGWQ 480 >gi|187925917|ref|YP_001897559.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187717111|gb|ACD18335.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 523 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 33/472 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIG--NSKNLINIDTLKWWESFNDTSL 61 A+ + F LLA C VGP+Y +P +P + + G ++ D WW + D L Sbjct: 20 AVAAAFTGLLAACAVGPDYKRPAAEIPASYKEAAPGWKVAEPADQQDRGDWWSIYEDPQL 79 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---NSTG 118 N L + N T+ Q A+ + RA FP+ AS N ++ NST Sbjct: 80 NALEERLNTANQTVAQFAAAYRQARALVGEARAAYFPTIGASAGATRSGNGRSSGGNSTT 139 Query: 119 -------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QLD+ W+ DL+G R + + A A A + A+L+ + L +Y Sbjct: 140 ATSRSGVSNSFNVQLDASWEPDLWGSVTRSVNAQKAGQQGAAADLANARLSAQATLAQTY 199 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + Y+++++L+ ++ G ++ +++ + +++S ++ Sbjct: 200 FSLRALDSTQKLLDDTVAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQASAIDNGV 259 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H I+ L+G PA+ F + +P + P+ L+ RPDI E+K Sbjct: 260 QRAQDEHAIAVLVGEPASTFSIPPAPLTAT---PPTVPAQM--PSALLERRPDIASAERK 314 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGK 339 A + +IG+A + +PSL+L+ S +NS + W+ GP+L +FD G Sbjct: 315 AAAANEQIGVAIAAFFPSLTLSASGGF--ENSVFSQLLTAPSRFWTLGPQLAATLFDAGL 372 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ A ++ T+++TVL A ++VE+ L S + + Q AV+ ++++++ Sbjct: 373 RQAQTDAARAAYDGDVATYRQTVLAAFQDVEDNLASQRILAQEIVVQQQAVDSARQALAI 432 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G +++L + E L Q S V L A+G G++ Sbjct: 433 VTNEYKAGTVGFVNVLTAQTTAFTAEQKLENIAGQRMVSSVGLVKALGGGWD 484 >gi|317484531|ref|ZP_07943440.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] gi|316924249|gb|EFV45426.1| NodT family efflux transporter [Bilophila wadsworthia 3_1_6] Length = 472 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 223/468 (47%), Gaps = 42/468 (8%) Query: 13 VLLAGCTVGPEYTKPHMP--------LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 VLL GCT+ P Y +P P L+P + + + + + + W F D L +L Sbjct: 13 VLLPGCTMAPNYVRPEAPVAEAWPDDLMPKGTVLAQATDQLASE-IGWKTFFTDQHLQRL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFI-PNLKT------- 114 +++AL N + + I A+ RADL P AS S++ + +L T Sbjct: 72 IQLALDNNRDLRVSALNIERARGLYQIQRADLMPGVSASGESSNKGVSADLSTTGEQTVS 131 Query: 115 --NSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +S G + +++D FG+ + +E+ L + AY A+L+++S++ +Y+ Sbjct: 132 RQHSLGVGVTSYELDFFGRIQSLKDKALETYLGT-EEAYRS---ARLSLVSEVAQAYLAL 187 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +ER++IA + L + + E+ + + G +S+L L + + + + DI Sbjct: 188 VADRERLNIATETLKSQQASYEMIARRHSVGVSSELDLRQAQTSVDTARVDIARYSGQVA 247 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ +S L G T + + S + ++ I + +P+ ++ RPDI E L Sbjct: 248 KDITALSLLAGTKVTPDMLPAKALS---ELPVWPDIPVSLPSTVLLQRPDILQAEHTLKA 304 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A+++ +P +SL +I + + F G W+F P++ LPIF+ G+ +N+ Sbjct: 305 ANADIGAARANFFPRISLTANIGTASNELSHLFDGGTGIWTFLPQVSLPIFEGGRNVANL 364 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSM 401 R +E+ + +++ + +A +EV +AL S+ + L HA ++ LS Sbjct: 365 RVSEADKKIAVANYEKAIQSAFREVSDALIDRVSLAGQLEAQKSLVHAT---SETYRLSG 421 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y QG S L +LD +RA +++L + ++ + LY A+G G Sbjct: 422 ERYNQGIDSYLAVLDSQRAMYSSQLNLISVRVAREQNLIMLYKALGGG 469 >gi|298484017|ref|ZP_07002186.1| outer membrane efflux protein OprM [Bacteroides sp. D22] gi|298269798|gb|EFI11390.1| outer membrane efflux protein OprM [Bacteroides sp. D22] Length = 465 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/418 (23%), Positives = 199/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF D L+ L+ +A+ +N ++ A RI AA+ N+ R++ FPS + R Sbjct: 53 WWKSFQDAKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFFPSIGLNAGWTRQET 112 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + + ++ IP Sbjct: 173 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYNTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SGGTLPDYMEPIGVGLPVDLLLRRPDVRG 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 291 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLSW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF G++ + R A++ E + +TVL A++E +NA+ K + L+ Sbjct: 346 TIFSGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNGYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 463 >gi|299531194|ref|ZP_07044605.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298720777|gb|EFI61723.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 473 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 103/451 (22%), Positives = 212/451 (47%), Gaps = 14/451 (3%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L +GC+ P +P P+ + + W + + D L +++++AL+ N Sbjct: 14 LLASGCSFIPTLERPAAPVAEHYSATDEQAGATAAADIPWQQFYTDPRLQQVIQLALENN 73 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKI 126 + A I A+ RA FP + S P+ T G W+I Sbjct: 74 RDLRVAVLNIEKAQAQYQIQRAGQFPEFGVAGSASRQPSATTGRYANSYMVGLSMPSWEI 133 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D +G+ + + +LA + A++++I+ + ++++ + +E ++I+ + L + Sbjct: 134 DFWGRIGSLKQQALAQYLATEEGRKAAQISLIATVANTWLNLQADEELLAISRRTLGTRE 193 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--YPATE 243 ++I+L+ L+ G S+L + ++ +S + + +V+ ++ L+G PA + Sbjct: 194 QSIKLTKLRLDSGVASELDYRQAQSLTESARATLAQQAGQRERDVNALTLLVGQTLPA-D 252 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L MQ + P L + G+P+DL+ RPDIR E+ + + A IG A++ +P++ Sbjct: 253 LLTSMQGKQLRDLPAL-ADVPSGLPSDLLLRRPDIRQAEQSMIAANASIGAARALFFPNI 311 Query: 304 SLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL S + + ++ P LYLPIF+ G+ ++N++ AE+S + ++ Sbjct: 312 SLTASAGFASSDISDLLKSDSAAFTIAPSLYLPIFNAGRNRANLQVAEASQKIAVAQYEG 371 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ +A +EV + L + K + +E + LS + Y G S LD+LD +R+ Sbjct: 372 SIQSAFREVSDTLVNRQALKDQLDAQSRQLEAEQVRYKLSDLRYTNGVASYLDLLDAQRS 431 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +E + + ++ V+LY +G G+ Sbjct: 432 LFALEQSVVQVRLAQLQNQVNLYKVLGGGWT 462 >gi|319763069|ref|YP_004127006.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|317117630|gb|ADV00119.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] Length = 468 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 106/413 (25%), Positives = 200/413 (48%), Gaps = 13/413 (3%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-H 106 D +WW+ D L LV ALQ + ++ A + A+ A + PS AS S Sbjct: 48 DLTQWWQQLGDAQLTGLVTQALQAHTSVRSARAAVEQARAQRDVQAAGMLPSLDASGSAQ 107 Query: 107 RFIPNLKTNSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 R N T ++ QL D+ W+ DLFG+ + + A+L +A A V A++ + +++ + Sbjct: 108 RSRSNGATGNSFQLGLDASWEPDLFGRIASGVRAGEADLLAAEAGVAAAQVALAAEVAVN 167 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R ++R+ IA L ++ +++ + G S ++ + ++ + +P L+ Sbjct: 168 YISLRSQQQRLQIAESNLAAQRETAQITGWRVQAGLASAVAEQQARTIVEQTAAQLPALQ 227 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H ++ L G P + ++ P + + PAD +R RPD+R E Sbjct: 228 AGMAQARHALAVLTGQPPAALDQALA--ASAPVPQAPAELALAFPADTLRQRPDVRQAEL 285 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + ++ A++ PSL L G++ AL+ G T S + LP+FD G + Sbjct: 286 GVRAAWERVAQAEAQRLPSLRLGGTLGLKALSLGALTGGGATAASLLASVSLPVFDGGAL 345 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E++ ++ + ++ VL A+K+VE+AL ++ D++ + +L+ A E + L+ Sbjct: 346 RAQVRAQEAALEQARVGYEAAVLGALKDVEDALVALQGDRERLARLEAAAEAAGNAALLA 405 Query: 401 MINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +LD +R TA+ V ++A + ++V LY A+G G+ Sbjct: 406 QHQYASGLVDFQTVLDTQRTLLTAQDGVAGTVAS--ASTNHVRLYKALGGGWQ 456 >gi|189461131|ref|ZP_03009916.1| hypothetical protein BACCOP_01778 [Bacteroides coprocola DSM 17136] gi|265753898|ref|ZP_06089253.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|189432221|gb|EDV01206.1| hypothetical protein BACCOP_01778 [Bacteroides coprocola DSM 17136] gi|263235612|gb|EEZ21136.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 451 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 213/455 (46%), Gaps = 22/455 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F++ ++L GC Y + +P +I + + ++ W E F D L L++ Sbjct: 6 LFTISTLMLTGCGTYSRYHRADIPTEKLYRNIPAGIDTTTLASMSWREMFTDRKLQFLIE 65 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL-----D 121 L+QN + A R+ AA+ +++ R PS IS N +T + Sbjct: 66 TGLRQNTDLNVARLRVEAAEAALMTARLSYLPS--LGISAEGSGNKYDGATAKAYNVGAS 123 Query: 122 SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+++LFG+ + ++A L + + +++ + SY + I H+ Sbjct: 124 ASWELELFGKLTAAKRGAVAALQGSRDYRQAVQTQLVATIADSYYTLALLDAQKVINHRT 183 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L+ ++ + G + +++ A + +ES + KS + +S +L P Sbjct: 184 LENWQATVRTLEALKKVGKANDAGVLQARANVMQLESSQLAICKSISETENALSAILAMP 243 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ S+ + + I++G+P L+ NRPD+R E +LA + +A+S Y Sbjct: 244 S----HSIER-SDLAEASFPDTISVGVPLLLLSNRPDVRRAEMELAQAFYATNVARSAFY 298 Query: 301 PSLSLNGSIALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQ 354 P+++L+G++ T++ PG W F L P+F++G +N++ A++ +E Sbjct: 299 PNITLSGTLGWTNNGGGVITNPG---QWLFNAIASLTQPLFNRGTNIANLKIAQTRQEEA 355 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +Q+++LNA KEV +ALT+ K H VE ++++ + + R + L+I Sbjct: 356 RLLYQQSLLNAGKEVNDALTAWQTAKSQFEINTHQVETLREAVRKTELLMRHSGTTYLEI 415 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +++ + E + +S + LY A+G G Sbjct: 416 LTTQQSLLEAETNRLQTSFDRIQSIIKLYHALGGG 450 >gi|167907761|ref|ZP_02494966.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei NCTC 13177] Length = 478 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 40 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 99 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 100 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 156 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 157 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 216 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 217 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 271 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 272 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 331 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 332 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 391 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 392 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 451 Query: 448 S 448 Sbjct: 452 G 452 >gi|213157679|ref|YP_002320477.1| multidrug efflux protein AdeK [Acinetobacter baumannii AB0057] gi|215482462|ref|YP_002324648.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] gi|239502316|ref|ZP_04661626.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AB900] gi|301344911|ref|ZP_07225652.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AB056] gi|301511082|ref|ZP_07236319.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AB058] gi|301595157|ref|ZP_07240165.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AB059] gi|332854203|ref|ZP_08435223.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013150] gi|332866355|ref|ZP_08436960.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013113] gi|332872570|ref|ZP_08440539.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6014059] gi|60207558|gb|AAX14803.1| AdeK [Acinetobacter baumannii] gi|193078197|gb|ABO13150.2| AdeK [Acinetobacter baumannii ATCC 17978] gi|213056839|gb|ACJ41741.1| multidrug efflux protein AdeK [Acinetobacter baumannii AB0057] gi|213988829|gb|ACJ59128.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] gi|322509220|gb|ADX04674.1| Outer membrane protein [Acinetobacter baumannii 1656-2] gi|323519249|gb|ADX93630.1| multidrug efflux protein AdeK [Acinetobacter baumannii TCDC-AB0715] gi|332728128|gb|EGJ59516.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013150] gi|332734703|gb|EGJ65807.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013113] gi|332739256|gb|EGJ70114.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6014059] Length = 484 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 108/424 (25%), Positives = 207/424 (48%), Gaps = 19/424 (4%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + +I + + F D L +++ +AL N + AT I A++ + + P+ Sbjct: 45 NSASGTSIAEQGYKQFFADPRLLEVIDLALANNRDLRTATLNIERAQQQYQITQNNQLPT 104 Query: 100 SYAS------ISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-- 149 AS +S PN T G + +++D +G+ R ++ A LDS A Sbjct: 105 IGASGSAIRQVSQSRDPNNPYSTYQVGLGVTAYELDFWGRVRSLKD--AALDSYLATQSA 162 Query: 150 -DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D ++++IS++ ++++ + +A Q L + L+ +F G S++ L + Sbjct: 163 RDSTQISLISQVAQAWLNYSFATANLRLAEQTLKAQLDSYNLNKKRFDVGIDSEVPLRQA 222 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + +++ +D+ + + ++ L+G P + L Q Q N++ G+P Sbjct: 223 QISVETARNDVANYKTQIAQAQNLLNLLVGQPVPQNLLPTQPVKRIAQQNVFT---AGLP 279 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ NRPD++ E L+ + A IG AK+ L+P++SL GS + F WS Sbjct: 280 SDLLNNRPDVKAAEYNLSAAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWS 339 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LPIFD G ++N++ +E+ + ++++V +A +EV +AL + + +T Sbjct: 340 VGPSLDLPIFDWGTRRANVKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTA 399 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q VE ++ +LS +R G S L +LD +R++ E L + ++ + ++LY Sbjct: 400 QQRLVEATNRNYTLSNARFRAGIDSYLTVLDAQRSSYAAEQGLLLLQQANLNNQIELYKT 459 Query: 446 IGSG 449 +G G Sbjct: 460 LGGG 463 >gi|167820994|ref|ZP_02452674.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 91] Length = 474 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 36 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 95 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 96 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 152 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 153 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 212 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 213 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 267 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 268 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 327 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 328 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 387 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 388 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 447 Query: 448 S 448 Sbjct: 448 G 448 >gi|169794916|ref|YP_001712709.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AYE] gi|184159309|ref|YP_001847648.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|260557281|ref|ZP_05829497.1| outer membrane protein oprM [Acinetobacter baumannii ATCC 19606] gi|88758806|emb|CAJ77869.1| RND family drug transporter [Acinetobacter baumannii AYE] gi|169147843|emb|CAM85706.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii AYE] gi|183210903|gb|ACC58301.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|260409387|gb|EEX02689.1| outer membrane protein oprM [Acinetobacter baumannii ATCC 19606] Length = 485 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 108/424 (25%), Positives = 207/424 (48%), Gaps = 19/424 (4%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + +I + + F D L +++ +AL N + AT I A++ + + P+ Sbjct: 46 NSASGTSIAEQGYKQFFADPRLLEVIDLALANNRDLRTATLNIERAQQQYQITQNNQLPT 105 Query: 100 SYAS------ISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-- 149 AS +S PN T G + +++D +G+ R ++ A LDS A Sbjct: 106 IGASGSAIRQVSQSRDPNNPYSTYQVGLGVTAYELDFWGRVRSLKD--AALDSYLATQSA 163 Query: 150 -DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D ++++IS++ ++++ + +A Q L + L+ +F G S++ L + Sbjct: 164 RDSTQISLISQVAQAWLNYSFATANLRLAEQTLKAQLDSYNLNKKRFDVGIDSEVPLRQA 223 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + +++ +D+ + + ++ L+G P + L Q Q N++ G+P Sbjct: 224 QISVETARNDVANYKTQIAQAQNLLNLLVGQPVPQNLLPTQPVKRIAQQNVFT---AGLP 280 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ NRPD++ E L+ + A IG AK+ L+P++SL GS + F WS Sbjct: 281 SDLLNNRPDVKAAEYNLSAAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWS 340 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LPIFD G ++N++ +E+ + ++++V +A +EV +AL + + +T Sbjct: 341 VGPSLDLPIFDWGTRRANVKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTA 400 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q VE ++ +LS +R G S L +LD +R++ E L + ++ + ++LY Sbjct: 401 QQRLVEATNRNYTLSNARFRAGIDSYLTVLDAQRSSYAAEQGLLLLQQANLNNQIELYKT 460 Query: 446 IGSG 449 +G G Sbjct: 461 LGGG 464 >gi|313159075|gb|EFR58450.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alistipes sp. HGB5] Length = 458 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 210/461 (45%), Gaps = 31/461 (6%) Query: 12 IVLLAG------CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I+LLA C+ P + L P + + G + + + ++WW + D++L +++ Sbjct: 7 IILLAAAAGMVSCSAVRHCKAPDVDL-PERIA-GEDSDSLTVADVQWWRFYGDSTLCQII 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 + L N +L A R+ +E RA+ PS + + N D Sbjct: 65 ERTLDNNRDMLAAAARVERLRELYRVSRAERLPSVTGTAYGDYETNDYAGEKSSRDPGFG 124 Query: 124 ------WKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 W++DL+G +R+ LA+++ A ++ +++ + +Y + Sbjct: 125 AKVTLSWELDLWGNLRWAKRKGGAEYLASVEDRRAM----RMTLVASVAAAYFNLIALDN 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +SI + L + + L+F G TS++ + + E S + IP LE+ ++ + Sbjct: 181 ELSIVRRTLITRSEGLYQVQLRFEGGLTSEMVYQQAKVEYASTAALIPDLERKIKIMENG 240 Query: 233 ISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I L+G P + F +L +G+P+ L++ RPD+R E++L ++A Sbjct: 241 ILLLMGENPDRRVVRGKMNTDAEFADSL----PVGLPSGLLQRRPDVRSSEQRLRAAMAS 296 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESS 350 G+A +D +P L+ N + L +D + + +S+ L PIF G+ ++ R A ++ Sbjct: 297 AGMAYADRFPRLTFNLTGGLENDALSGFFRSPFSYVAGTLASPIFGFGRKQARYRAALAA 356 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E + +++ VL KE ++A+ + +K + + K + L+ + YR G + Sbjct: 357 YDEARLAYEQKVLTVFKEADDAVVTYRSARKTAALKLNLRDAASKYVELAHLQYRAGSTN 416 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +D+LD +R ++ LS + R + V LY A+G G+ Sbjct: 417 YIDVLDAQRRYFDAQIGLSNSVRDEHLALVQLYKALGGGWT 457 >gi|262281242|ref|ZP_06059024.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202] gi|262257473|gb|EEY76209.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202] Length = 485 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 222/458 (48%), Gaps = 26/458 (5%) Query: 9 SLFIVLLAGCTV--GPEYTKPHMPLLPTQF--SIG-NSKNLINIDTLKWWESFNDTSLNK 63 S + L+ C GPE P++ T S G NS + +I + + F+D L + Sbjct: 16 SALALALSACQSMRGPE------PVVKTDIPQSYGYNSASGTSIAEQGYKQFFSDPRLLE 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFIPN--LKTN 115 ++ +AL N + AT I A++ + + P+ AS +S PN T Sbjct: 70 VIDLALANNRDLRTATLNIERAQQQYRITQNNQLPTIGASGSAIRQVSQSRDPNNPYSTY 129 Query: 116 STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G + +++D +G+ R + +++L + S + D ++++IS++ ++++ + Sbjct: 130 QVGLGVTAYELDFWGRVRSLKDAALDSYLSTQSARDSTQISLISQVAQAWLNYSFASANL 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A Q L + + L+ +F G S++ L + + +++ +D+ + + ++ Sbjct: 190 KLAEQTLKAQQDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQMAQAQNLLN 249 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G + L Q Q N+Y G+P+DL+ NRPD++ E L+ + A IG Sbjct: 250 LLSGQSIPQNLLPNQPVKRITQQNVYT---AGLPSDLLNNRPDVKAAEYNLSAAGANIGA 306 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ L+P++SL GS + F WS GP L LPIFD G ++N++ +E+ Sbjct: 307 AKARLFPTISLTGSAGYASTDLSDLFKSGGFVWSVGPSLDLPIFDWGTRRANVKISETDQ 366 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++++V +A +EV +AL + + +T Q VE ++ +LS +R G S Sbjct: 367 KIALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNARFRAGIDSY 426 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +LD +R++ E L + ++ + ++LY +G G Sbjct: 427 LTVLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLGGG 464 >gi|302384205|ref|YP_003820028.1| RND efflux system, outer membrane lipoprotein, NodT family [Brevundimonas subvibrioides ATCC 15264] gi|302194833|gb|ADL02405.1| RND efflux system, outer membrane lipoprotein, NodT family [Brevundimonas subvibrioides ATCC 15264] Length = 482 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 112/459 (24%), Positives = 211/459 (45%), Gaps = 31/459 (6%) Query: 20 VGPEYTKPHMPLLP------TQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQ 71 VGP+ P PL P +G++ + WW + D +L+ L++ A Q Sbjct: 24 VGPK--APDAPLPPLASGAFVSSPLGSATGATTSAEARSDWWRLYADPTLDGLIEQAFAQ 81 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------------- 118 N + A + A + ++ R+ L P++ S S + + G Sbjct: 82 NNQLEAAVANLRAVRASLSEARSGLLPTTGTSASATRSQSSSATAQGLPAGQDAPEIDIY 141 Query: 119 --QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ ++IDLFG+ I ++ A+ D+ A +DI +++V ++ +Y DA +I+ Sbjct: 142 DVGLDASYEIDLFGRVASTIRAARADADAQAAALDIIRVSVAAETTRAYADACSANAQIA 201 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + L L + +L+ GA + L + +A++ S + +P+L + ++T Sbjct: 202 VAERTLSLQQNTADLTRRLLEGGAGTALDTSRAQAQLASTRAQLPSLRAQRDGALFRLAT 261 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G E ++ P L PI +G A L+ RPDIR E+ LA + A++ +A Sbjct: 262 LTGVTPAE--ASTAARACMRPPQLTQPIPVGDGAALLARRPDIRQAERTLAAAAARVNVA 319 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + L+P++SL GSI T ++ + +SFGP + + ++ I A++ Sbjct: 320 TAALFPTISLGGSIGSTALDASDLSDDSSYRFSFGPLISWSFPNVLAARARIEAADARTD 379 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 T+ +TVL+A++E E ALT+ + L A + + L+ + + G SL Sbjct: 380 AALATFDQTVLSALEETETALTNYANELDRRAALTEARDQAANASRLARLRFDAGADSLF 439 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R A + L+ + + + L+ A+ G++ Sbjct: 440 TVLDAQRTEATADAALAQSDALVTTYQIALFKALAGGWD 478 >gi|66047236|ref|YP_237077.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63257943|gb|AAY39039.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 486 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPQAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L ++ ++++++ + + Sbjct: 122 -TGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|85375828|ref|YP_459890.1| putative outer membrane efflux protein OprN precursor [Erythrobacter litoralis HTCC2594] gi|84788911|gb|ABC65093.1| putative outer membrane efflux protein OprN precursor [Erythrobacter litoralis HTCC2594] Length = 495 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 75/480 (15%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLK-----WWESFNDTSLNKL 64 + LLAGC GP+Y P P L T + GN+ + ID L WW D LN+L Sbjct: 1 MALLAGCMSGPDYAGP--PQLAT--AAGNAFVRAGPEIDPLAPIAGDWWTLLGDPVLNEL 56 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQ--- 119 A N + A RI A+ ++ RA+ P+ A + IP L S Sbjct: 57 EARAQVGNPGVAAARARIEQARASVRQERANRLPAVAAQATAVQANIPGLDIGSGPPPGS 116 Query: 120 -------------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 L+++W+ID G Q R +E+ A ++ A + AK+ + ++ Sbjct: 117 PGAPADTEEQDSLSVYNVGLNANWEIDFAGGQARRVEAINAQAAASVANAEDAKVQLAAE 176 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R + R+ + + DL ++ +EL++ ++TQGA + + AE++ ++S I Sbjct: 177 VARAYVSLREAQGRLELVQRERDLQQQILELTYQRYTQGALALFPVGDANAELELLKSQI 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIRNRP 276 + + ++ L G + Q+ + +P + +G PA LI RP Sbjct: 237 AEAQADIDVFKDTLAVLTGEAPGALDGLLAAQA-----EIPLPPERVAVGDPAALIARRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYL 332 D+R E+ LA + A+IG+A++ +P +S G + L D PG + + P+L Sbjct: 292 DVRAAERMLAAANARIGVAEAARFPKISFMGILGLGGSEPDDILDPGNLSAIAL-PRLQW 350 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH---- 388 + D G+ ++I +AES+ E + E VL A+++ E +L + + V L Sbjct: 351 NLLDFGRTAASIDQAESARDEAEARYLEVVLGALRDAEQSLARFGQQRANVAALAQISRQ 410 Query: 389 ---AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 A EL+++ + +I+ QG E++ SI KR+ A++ +D IA Sbjct: 411 ADTAAELNEQRRAAGVIS--QG-----------------ELNTSIRKREQARANLDRAIA 451 >gi|73540628|ref|YP_295148.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72118041|gb|AAZ60304.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 494 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 116/457 (25%), Positives = 205/457 (44%), Gaps = 35/457 (7%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQ 70 L GC P Y +P P T++S S + +T++ WW+ F D L+KL+ AL Sbjct: 38 LTGCADFRPPVYERPETPA-KTEWSRQESITVSPAETVQPNWWQGFKDPYLDKLITQALS 96 Query: 71 QNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS---- 122 N I RI A+ I +A P ++ A++ T +TGQ + Sbjct: 97 GNYDIKVLAARIRVAQAQIGEAKAGQLPVIDLNANANV---------TKTTGQATARSYN 147 Query: 123 -----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W ID++G+ + +++ A + A L + + + +Y F E+I Sbjct: 148 LGGQLSWDIDIWGKVEKGVQAQTAEFHATEADWRAGYLTLAANVSTAYFQILQFDEQIDQ 207 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + + + F G K+ +++ +AEI + D+ L +S + + ++TL Sbjct: 208 QTRTVQKNGQILNTYQAMFQNGLVPKIRVMQQQAEINRLTKDLIELRRSRDVTENALATL 267 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA K + QP P+ G+P+ L+ RPDI E ++ + +G A+ Sbjct: 268 VGVPAGNLKVPPGKLQDRVQPP---PVPAGLPSQLLARRPDIVAAEYRVLAAYNIVGQAR 324 Query: 297 SDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 PS+SL NG +A NS T P + LP+ D I++ ++ E+ + Sbjct: 325 LAQLPSISLTANGGMASFALNSLLKTFTL-GIAPSITLPMLDP-NIRARVKTTEAQVKVV 382 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + TV+NA +EVE AL +++ KK +LQ V+ + S ++G S L++ Sbjct: 383 ESDYGRTVMNAFEEVETALVNVDAHKKQRIELQQQVDQLRVVSSQIEAQLKEGVVSQLEV 442 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + ER+ ++ L +Q+ V LY A+G G+ Sbjct: 443 FETERSLLSAQLSLLAVHQQILADTVTLYKALGGGWT 479 >gi|134093330|ref|YP_001098405.1| putative outer membrane efflux protein [Herminiimonas arsenicoxydans] gi|133737233|emb|CAL60276.1| Putative outer membrane efflux protein [Herminiimonas arsenicoxydans] Length = 480 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 19/419 (4%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-- 105 D +WW+ ND+ L +L++ A + T+ A RI ++ +S A L P AS++ Sbjct: 60 DLSQWWQQQNDSLLVELIQAAQTVSPTVATAVARIEQSRATRVSADAALLPKLDASVNVQ 119 Query: 106 ----HRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + +P L T + L W+ DLFG R ++LA L A A A+++V +++ Sbjct: 120 RTNMQQPLP-LGTTTQAALQPSWEADLFGGNRATSRAALARLQGAQANWHDARVSVAAEV 178 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y R + + + D + LS L G + A + E + Sbjct: 179 ANRYYSLRTCNKLVIVTRADADSRTETARLSDLSAKAG--FQAPATAALARASAAEGNGR 236 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIG-IPADLIRNRPDI 278 ++ ++ +I L+ A + +K ++ P+ + +I +PA + RPD+ Sbjct: 237 ATQQRALCDL-DIKALVALTAIDEPAIRKKVADTPAPDTSATVLDISSLPAQTLAQRPDV 295 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGP-KLYLPI 334 E+++A + A++G A++ YP LSL+GSI + S G T+ WS GP L LPI Sbjct: 296 FIAEREVAAASAEVGNAQAQRYPRLSLSGSIGVASFRSG-GVTTNLDTWSIGPVSLTLPI 354 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G +N+ A++ ++++ +V A++EVE AL ++ + AV+ ++ Sbjct: 355 FDGGARAANVTAAQAQYDAAVVSYRGSVRQAVREVEEALVNLQSTAARSDDARVAVDGYR 414 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY-NP 452 S + + Y+ G SL+++ D R E++ +R+ +++ LY A G G+ NP Sbjct: 415 ASFNGTESRYQNGLASLVELEDARRVRLAAELNAVSLERERMAAWIALYRAAGGGWSNP 473 >gi|126642768|ref|YP_001085752.1| AdeK [Acinetobacter baumannii ATCC 17978] Length = 458 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 108/424 (25%), Positives = 207/424 (48%), Gaps = 19/424 (4%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + +I + + F D L +++ +AL N + AT I A++ + + P+ Sbjct: 19 NSASGTSIAEQGYKQFFADPRLLEVIDLALANNRDLRTATLNIERAQQQYQITQNNQLPT 78 Query: 100 SYAS------ISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-- 149 AS +S PN T G + +++D +G+ R ++ A LDS A Sbjct: 79 IGASGSAIRQVSQSRDPNNPYSTYQVGLGVTAYELDFWGRVRSLKD--AALDSYLATQSA 136 Query: 150 -DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D ++++IS++ ++++ + +A Q L + L+ +F G S++ L + Sbjct: 137 RDSTQISLISQVAQAWLNYSFATANLRLAEQTLKAQLDSYNLNKKRFDVGIDSEVPLRQA 196 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + +++ +D+ + + ++ L+G P + L Q Q N++ G+P Sbjct: 197 QISVETARNDVANYKTQIAQAQNLLNLLVGQPVPQNLLPTQPVKRIAQQNVFT---AGLP 253 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ NRPD++ E L+ + A IG AK+ L+P++SL GS + F WS Sbjct: 254 SDLLNNRPDVKAAEYNLSAAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWS 313 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LPIFD G ++N++ +E+ + ++++V +A +EV +AL + + +T Sbjct: 314 VGPSLDLPIFDWGTRRANVKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTA 373 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q VE ++ +LS +R G S L +LD +R++ E L + ++ + ++LY Sbjct: 374 QQRLVEATNRNYTLSNARFRAGIDSYLTVLDAQRSSYAAEQGLLLLQQANLNNQIELYKT 433 Query: 446 IGSG 449 +G G Sbjct: 434 LGGG 437 >gi|146328985|ref|YP_001210076.1| outer membrane multidrug efflux protein [Dichelobacter nodosus VCS1703A] gi|146232455|gb|ABQ13433.1| outer membrane multidrug efflux protein [Dichelobacter nodosus VCS1703A] Length = 467 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 216/460 (46%), Gaps = 22/460 (4%) Query: 5 RAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLN 62 + ++SL V LA C+ P+Y +P + L + + L W E F D L Sbjct: 3 KPVYSLSLAVFLAACSFVPDYEQPTVALEQQWIKTALDEQTTATASDLGWREYFRDPQLQ 62 Query: 63 KLVKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 L+ ALQ N LT+ +A + A++N L V A S + + +TN Sbjct: 63 TLIAAALQHNHDLKQAALTVERAAAQYGIAEKNELPVIA--LNSEVNRAGN--VRGAETN 118 Query: 116 -STGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G S++++D FG+ R + ++ N L + A+ D A+L VI + +Y AR + Sbjct: 119 YRVGVGFSNFELDFFGRVRAMTTAALNHYLQTREAR-DSAQLAVIQGVAKTYYAARINQA 177 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + ++ Q++ +K+ EL+ L++ G ++ L E+ I + E++ +S++ ++ Sbjct: 178 LMDLSKQVVQSRQKSAELARLQYQAGVINETILHGYESAIAAAEANYHGYRRSYQQALNG 237 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +S+L+G P + + L +P G+P+ L+ RPD+R E L + A I Sbjct: 238 LSSLVGMPYQQLNVPAAGGLDQAFSALTVPA--GLPSALLEKRPDVRAAEYALKAANANI 295 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ L+P +SL GS+ D+ + WS P + LPIFD+G + + ++ +E Sbjct: 296 GAARAALFPKISLTGSLGYLSTELDHLLDEPHRAWSITPAVMLPIFDRGLLNAQVKVSEL 355 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + +Q+T+ A +E+ + L + + Q A + + L + + G Sbjct: 356 NQKIVVEEYQKTLQTAFQEIADILIARETYAEQYQAAQKAATAQNEVLRLEKLRFNTGVS 415 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L+ ER + + + + + L + V Y A+G G Sbjct: 416 DGLALLEAERNSFQTQERVLQVQLGLLTNLVSFYTAMGGG 455 >gi|254252387|ref|ZP_04945705.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124894996|gb|EAY68876.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 632 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 29/383 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSK---------NLINIDTLKWWESFNDTSLNKLVKI 67 GC+ P Y +P P+ PT S + W F D +L + Sbjct: 220 GCSFAPRYERPAAPVPPTYVSTDDGAVASVAPDAARADAALLDDWRAYFTDPALQAWIDA 279 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----RFIPNLKTNSTGQLD-- 121 AL N + A R+ A+ RADL PS A++ + ++ P ++ ++ L Sbjct: 280 ALANNRDLRVAAARVEEARALYGVQRADLLPSIDANLGYERTRQYDPVVRESAVSGLYRA 339 Query: 122 ----SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S +++DLFG+ R++ E++LA +A AQ + ++ VI+++ +Y+ R E+++ Sbjct: 340 GVGISAYELDLFGRVRNLSEAALAEYFATADAQRTV-RIGVIAEVAGAYVSERSLYEQLA 398 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + LD L+ ++ G + + L + + S + L++ V + Sbjct: 399 LAQRTLDARTSMAALTQRRYAAGTSDAIELRSAQMLVASARASQAALQREHAQAVRALQL 458 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G +F +Q + PI G P++L+ RPD+R E L + A+IG A Sbjct: 459 LAG----DFARRVQGDATALDTLAIAPIAPGAPSELLERRPDVRQAEAHLKAANAQIGAA 514 Query: 296 KSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P ++L GS++ N F W+F P++ LPIF G+ ++N+ A + Sbjct: 515 RAAFFPRIALTTDYGSVSDAFANLFAAGTNVWTFAPRITLPIFAGGRNRANLDVANARKH 574 Query: 353 EQYITWQETVLNAIKEVENALTS 375 +++ V A +EV +A + Sbjct: 575 AAVAEYEKVVQTAFREVADAFAA 597 >gi|300697413|ref|YP_003748074.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum CFBP2957] gi|299074137|emb|CBJ53682.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum CFBP2957] Length = 504 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 115/471 (24%), Positives = 211/471 (44%), Gaps = 40/471 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQF------------------SIGNSKNLINIDTLKWWESFND 58 GCT+ P Y +P P+ P F + G+++ + + + W + F D Sbjct: 20 GCTLMPTYQRPAAPV-PATFAGTSDKSDASDASGERGNTGGDARPVGPVADIGWRDVFTD 78 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-NST 117 SL +++ +AL N + A I A+ A LFP+ AS S T ++T Sbjct: 79 PSLQRVIGMALANNRDLRVAVLNIEKARAQYRVQDAALFPTVKASGSESASRTPATLSTT 138 Query: 118 GQ-----------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQ S +++DLFG+ R + + +L S +++++I+++ +Y+ Sbjct: 139 GQPLVAHSYSATLGFSAYELDLFGRVRSLSAQALEQYLSTVEARRSSQISLIAEVATAYL 198 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ + +A L L+ + G S+L+L + + + + D+ Sbjct: 199 TLAADQDLLKLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVDAARVDVERYTAQ 258 Query: 226 FRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + L+G PA E L S+ +L I G+ ++L++ RPDI E Sbjct: 259 VAQDRNALVLLVGADLPA-ELLPGSLPDSSAAAGSLLATIPPGLTSNLLQRRPDILQAEH 317 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +PS+SL S A T S F G + W+FGP++ LPIFD G Sbjct: 318 DLKAANANIGAARAAFFPSISLTAS-AGTSSASLAGLFKGGSGAWNFGPQIALPIFDGGA 376 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++N+ A +S +++ + A +EV +AL + + Q VE S L Sbjct: 377 NRANLDVANTSRDIAVAQYEKAIQTAFREVSDALAQRGTLGRQIEAQQSLVEATADSYQL 436 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +++G S L++LD +R+ + +L + + V Y +G G+ Sbjct: 437 ATARFKRGVDSYLNVLDSQRSLYTAQQNLINTRLSRLTNLVTFYKTLGGGW 487 >gi|330807998|ref|YP_004352460.1| outer membrane protein precursor; efflux transporter outer membrane factor (OMF) lipoprotein, NodT family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376106|gb|AEA67456.1| outer membrane protein precursor; efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 485 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 227/474 (47%), Gaps = 37/474 (7%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL I V+L+GC++ P+Y +P P+ Q+ G + N W + F+ Sbjct: 3 KSLLSLTIAAVVLSGCSLIPDYQRPETPV-AAQYPQGPAYEAANAPGQAAAEQGWKQFFH 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L+++AL+ N + A I+A RADLFP S+ S S + +P + + Sbjct: 62 DPTLQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSATGSGSRQRVP-ARAS 120 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 +G+ S +++DLFG+ R + E +L + + ++++++ + + Sbjct: 121 QSGEAAISSSYSATLGISAYELDLFGRVRSLSEQALQSYFATEEARRSTQISLVANVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + + L Y+++ +L+ G +S L L + +++ + Sbjct: 181 YLTWQADKELLKLTQETLGAYEQSFKLTSRSAEVGVSSALDLSQARTAVENARVQLARYT 240 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++++ LLG L S +L + G+P+DL++ RPDI E+ Sbjct: 241 RQVAQDENSLTLLLGTGLPANLS-----SQPLNDDLLSEVPAGLPSDLLQRRPDILQAER 295 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +PS+SL G+++ F G + W+F P++ LPIF+ G + Sbjct: 296 NLLAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWTFAPQINLPIFNAGSL 355 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSM 397 ++++ A+ +++++ A +EV + L + NE + T V ++ Sbjct: 356 RASLDYAKIQKDINVAQYEKSIQTAFQEVSDGLAARQTYNEQLQAQTDF---VAANQDYY 412 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G S L LD +R + L + S V+LY A+G G+N Sbjct: 413 RLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWN 466 >gi|58039434|ref|YP_191398.1| Outer membrane channel lipoprotein [Gluconobacter oxydans 621H] gi|58001848|gb|AAW60742.1| Outer membrane channel lipoprotein [Gluconobacter oxydans 621H] Length = 506 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 222/486 (45%), Gaps = 52/486 (10%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMP---------------------LLPTQFSIGNSKN 43 R L + +L+ C VGP++ +P +P + QF G Sbjct: 10 RVSLLLCLTVLSACAVGPDFHRPDLPKNMAYQGARLTATAGHGVVGATVQQQFQSG---- 65 Query: 44 LINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS 103 ++I +WW F + +LN LV AL N ++ + + +A E A L+P+ AS Sbjct: 66 -VDIPG-QWWTVFGNPNLNALVDQALANNQSLRAMQQGLKSAWEQRRIEGAGLYPTLSAS 123 Query: 104 IS---------HRFIPN----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQV 149 + + IPN L T QL+ + DL+G RR IE++ A D Q+ Sbjct: 124 FNPTRNKTSRVYSPIPNANVWLYNVHTAQLNIGYVPDLWGGTRRAIEAAGAQADLQKFQL 183 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + L +IS L+ + I+ + I ++++ + ++ + G S+ + + Sbjct: 184 EATALTMISDLVNATIEEATIRAEIDATNELIRSQRAVLKTVTAEQGLGNASRQDMAQQL 243 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIP 268 A + +E+ +P L ++ L+G P + + +Q F +P+++ P Sbjct: 244 ASVAQLEATLPGLNLQLAQTRDQMAVLVGVTPNSPLPEFRLEQ---FTLPKTLPVSL--P 298 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTHW 324 +DL+ RPDIR + ++ + A+IG+A ++ P++ L+ + + + D PGY +W Sbjct: 299 SDLLNQRPDIRAAQAQIQSASAQIGVAIANRLPNVQLSATPAQAVGVMSDFFKPGYG-NW 357 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + + PIF G + R+A + + T++ TVL+AI++V ++L ++ D +T Sbjct: 358 TIAATVMQPIFQGGSLLHAERQARDNLLQANETYKATVLSAIQDVADSLHAVTFDADALT 417 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ ++ +S+ ++ R G S L +L ++ A+ + A+ V L+ Sbjct: 418 ANENTLKATSQSLKIAQGQLRLGDVSELVMLQAQQTNAQARLAYVQAEGARFSDSVGLFQ 477 Query: 445 AIGSGY 450 A+G G+ Sbjct: 478 ALGGGW 483 >gi|302187782|ref|ZP_07264455.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 486 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 112/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L S+ ++++++ + + Sbjct: 122 -TGQSGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|117920363|ref|YP_869555.1| outer membrane efflux protein [Shewanella sp. ANA-3] gi|117612695|gb|ABK48149.1| outer membrane efflux protein [Shewanella sp. ANA-3] Length = 489 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 127/479 (26%), Positives = 226/479 (47%), Gaps = 52/479 (10%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQ 70 LL GC++ P+YT P + + ++ + + ++ + L WW FND LN LV A Q Sbjct: 14 LLGGCSMSPDYTPPKVKV--SELYLNAATEGVSQEALAYQAWWRQFNDPQLNALVAKAQQ 71 Query: 71 QNLTILQATERINAA----------KENILSVRADLF--------PSSYASISHRFIP-- 110 QN+++ A+ER+ AA K +SV A P +++ +P Sbjct: 72 QNISLQIASERVRAARAYQAAVSSLKVPTVSVGAGYLDMRISENDPLMGSAVGGIELPAG 131 Query: 111 ----NLK-----TNSTGQLDS-DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VIS 158 NLK NST S W+ DLFG+ + + A + + AQ+ A L + + Sbjct: 132 LGGGNLKLMNRDPNSTTVGASIAWEADLFGRIASLTQA-AEIRAEQAQLYRANLTTLITA 190 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++I +Y+ R +ER++IA Q + + + L G S L + +A + + E+ Sbjct: 191 EVIDNYLQYRGTQERMAIARQNIAEQAEVLALVESLERNGYGSPLDVANAKAALAASEAM 250 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P L + + ++H ++ LLG E + S P + I G+P++L+ R DI Sbjct: 251 LPMLSSAEQAHLHRLAILLGESLKETSGRL---SAAALPAMTELIPTGVPSELLTRRLDI 307 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIF 335 E+++A ++G A + YPS L G+ L+ D + F + W+ G + +F Sbjct: 308 AIAEREMAAKNQELGAAIAAKYPSFFLTGAPGLSADHIDDLFSSDSLTWALGAGVSWNVF 367 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KIVTKLQHAVEL 392 D G+ ++ + E+ + +++Q+TV NAI EVE L ++ + + K + E+ Sbjct: 368 DGGRTQAMVEIQEAGFKTAALSYQQTVNNAINEVETVLKHYGNNQQYHRFIAKAEAQSEV 427 Query: 393 H-KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+ SL YR G + L +L + ++ +A+ Q A S V LY A+G + Sbjct: 428 AVQKATSL----YRAGLENHLSVLTAQNVKNNMQDAEVLARLQTASSVVSLYKALGGDW 482 >gi|241761538|ref|ZP_04759625.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373846|gb|EER63379.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 999 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 108/433 (24%), Positives = 200/433 (46%), Gaps = 43/433 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV----RADLFPSSYASISH 106 +WWE FND LNKL++ + + ++ QA A N L+V R+ ++PS S S+ Sbjct: 540 RWWELFNDPELNKLIERSDVASQSVAQA----EATWRNALAVMGQNRSSMWPSISLSASN 595 Query: 107 RFI---------------------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 + N+ N L W D FG RR IE+S A ++ Sbjct: 596 QHTVTGGGSEVVNTAGGGSSTVSRSNISDNYRAGLSMSWTPDFFGGVRRQIENSRATAEA 655 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A ++ A+L + + + SY+ R I++ Q + Y +E++ +F G + Sbjct: 656 NMADIETARLALHAGVASSYLQLREADAEIAVMEQTIAAYTHALEVARNRFNAGIAPESD 715 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-I 263 + + E ++ + S I +L ++ R IS +G PA +F H + N++ P +P + Sbjct: 716 VFQAETQLSNTRSQIESLRQNRRTYEDAISVYVGIPAGDF-HIEPR--NDWSP--VVPDV 770 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGY 320 + +P+ L++ RPDI E+K+ + A IG+ K+ YPS S++ G A Sbjct: 771 PLDLPSTLLQRRPDIASAERKIEAASATIGVRKAAFYPSFSMSPYAGDTAGDITRLLAQS 830 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 ++ WS G + + D G S + +A ++ + +++ VL A + V + + + Sbjct: 831 SSIWSVGASMAFTVLDWGSHLSQLHQARAAYSQAVANYRQVVLQAYQNVADEIAATQIYG 890 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--S 438 T L A + +S ++ Y+ G + D++ +E T+ + S+ + QLA+ + Sbjct: 891 NQETHLNDAFKNADRSEQATLKRYQVGLVAYTDVVTVE--TSALSAKRSLMQTQLARQTA 948 Query: 439 YVDLYIAIGSGYN 451 V L A+G G+ Sbjct: 949 AVSLIQALGGGWT 961 >gi|190576266|ref|YP_001974111.1| putative multidrug efflux system outer membrane protein [Stenotrophomonas maltophilia K279a] gi|190014188|emb|CAQ47832.1| putative multidrug efflux system outer membrane protein [Stenotrophomonas maltophilia K279a] Length = 471 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 105/468 (22%), Positives = 215/468 (45%), Gaps = 22/468 (4%) Query: 3 ILRAIFSL-FIVLLAGC-TVGPEYTKPHMPLLPTQFS-IGNSKNLINIDTLKWWESFNDT 59 +LRA+ + +L GC ++ P Y +P P+ P QF G + + W + F + Sbjct: 5 LLRALAAATMTAVLGGCVSMAPHYQRPEAPV-PAQFGNAGTGEAEPALAMPAWRDVFLEP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI--PNLKTN 115 L +++ +ALQ N + A ++ + RA L PS + S++ + N +T Sbjct: 64 RLQQVIALALQNNRDLRVAVLQVEKERAQYRIQRAALLPSVDASGSVTRSRVSDANSETG 123 Query: 116 STGQLDSD--------WKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYID 166 T Q +SD W++DLFG+ R +++ +L N ++ A+ ++++++ +++ Sbjct: 124 VTQQTESDAVQVGISSWELDLFGRIRSLKNEALQNWLASAENQRAARTSLVAEVATAWLA 183 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ ++ Q LD ++ ++ + + QG S L L +++ +++ + L+ Sbjct: 184 LAADEQSLAFTQQTLDSQQQTLQRTEARHAQGLASGLDLSQVQTSVEAARGALAKLQTQQ 243 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G P L + + +P N+ P+ ++ RPD+ E L Sbjct: 244 AQDRDALQLLVGAPLDPALLPTAQALDGSVALAPLPANL--PSSVLLQRPDVLSAEHALQ 301 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P+L+L G + F WSF P + PIF G +K++ Sbjct: 302 AANADIGAARAAFFPTLALTANYGHSSTALSTLFSAGTRGWSFAPSITAPIFHAGALKAS 361 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + ++ +++ + A EV +AL + + + + V ++S +L+ Sbjct: 362 LDASKIGKDIGIAQYEKAIQQAFSEVADALATRDHLTAQLDAQRALVADSQRSYTLAEAR 421 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G L LD +R+ + DL ++Q A + V L+ +G G + Sbjct: 422 YRTGLDGYLQSLDAQRSLYAAQQDLIALQQQEAGNRVTLFKVLGGGAD 469 >gi|169632592|ref|YP_001706328.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii SDF] gi|169151384|emb|CAP00109.1| outer membrane protein (AdeC-like) [Acinetobacter baumannii] Length = 485 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 108/424 (25%), Positives = 207/424 (48%), Gaps = 19/424 (4%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + +I + + F D L +++ +AL N + AT I A++ + + P+ Sbjct: 46 NSASGTSIAEQGYKQFFADPRLLEVIDLALANNRDLRTATLNIERAQQQYHITQNNQLPT 105 Query: 100 SYAS------ISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-- 149 AS +S PN T G + +++D +G+ R ++ A LDS A Sbjct: 106 IGASGSAIRQVSQSRDPNNPYSTYQVGLGVTAYELDFWGRVRSLKD--AALDSYLATQSA 163 Query: 150 -DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D ++++IS++ ++++ + +A Q L + L+ +F G S++ L + Sbjct: 164 RDSTQISLISQVAQAWLNYSFATANLRLAEQTLKAQLDSYNLNKKRFDVGIDSEVPLRQA 223 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + +++ +D+ + + ++ L+G P + L Q Q N++ G+P Sbjct: 224 QISVETARNDVANYKTQIAQAQNLLNLLVGQPVPQNLLPTQPVKRIAQQNVFT---AGLP 280 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ NRPD++ E L+ + A IG AK+ L+P++SL GS + F WS Sbjct: 281 SDLLNNRPDVKAAEYNLSAAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWS 340 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LPIFD G ++N++ +E+ + ++++V +A +EV +AL + + +T Sbjct: 341 VGPSLDLPIFDWGTRRANVKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTA 400 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q VE ++ +LS +R G S L +LD +R++ E L + ++ + ++LY Sbjct: 401 QQRLVEATNRNYTLSNARFRAGIDSYLTVLDAQRSSYAAEQGLLLLQQANLNNQIELYKT 460 Query: 446 IGSG 449 +G G Sbjct: 461 LGGG 464 >gi|167829350|ref|ZP_02460821.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 9] Length = 471 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 33 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 92 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 93 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 149 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 150 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 209 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 210 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 264 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 265 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 324 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 325 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 384 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 385 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 444 Query: 448 S 448 Sbjct: 445 G 445 >gi|330819385|ref|YP_004348247.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] gi|327371380|gb|AEA62735.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] Length = 504 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 114/491 (23%), Positives = 225/491 (45%), Gaps = 59/491 (12%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHM----------------PLLPTQFSIGNSKNL 44 + I ++ + +++LAGCTVGP+Y +P + P P+ ++ Sbjct: 14 LPIGASLLAAGLMVLAGCTVGPDYRRPLVQSPASWRLDPADAYWRPAAPSHAALAQ---- 69 Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----- 99 WW++F D L+ L A N T+ R +AA+ + + + PS Sbjct: 70 ------DWWKAFGDPLLDDLEARAATGNETVQMMAARYHAARALLAASASAELPSIGLTA 123 Query: 100 ---SYASISHRFIPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYA 147 Y R + N T + + +D +++DLFG+ RR +E++ A+ + A Sbjct: 124 GASRYKISRDRPLLNYGTPNASTVQNDLQVGATVSYELDLFGKVRRSVEAARADTEQARD 183 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 ++ A+L + ++L Y+ R + + ++ + L +K ++ + GA S L L + Sbjct: 184 ELADARLVISAELATQYLALRETDAELDVLNRSVVLQRKALDFVRAQHELGAASGLELQQ 243 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-I 263 A++ + + L + H I+TL+G PA F + P L P + Sbjct: 244 QTAQLDATRTQAQLLLNQRAQDEHAIATLVGTPAPSF---------SIAPRLVKLEAPRL 294 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGY 320 + G+P++L++ RPD+ E+ +A + A+IG+A++ +P L+L+ I A + F Sbjct: 295 SAGLPSELLQRRPDVASAERAMAAANARIGVARAAYFPDLTLSPGIGWDATRFGSLFTAS 354 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + WS G L P+F+ G++ + + A+++ +++TVL A +EV+NA+T ++ Sbjct: 355 SLLWSLGASLGQPLFEGGRLAAGVDYAKANYAAAQARYRQTVLTAFQEVQNAVTGLSVLD 414 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + + A + L+ Y G + +D++ ++ E D + Q A Sbjct: 415 GALQRAMDASASARALAELAQDRYAGGLTAYIDVISAQQQLLSSERDEVRIRGQRAALVA 474 Query: 441 DLYIAIGSGYN 451 L A+G G++ Sbjct: 475 YLAKALGGGWS 485 >gi|258541244|ref|YP_003186677.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256632322|dbj|BAH98297.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256635379|dbj|BAI01348.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256638434|dbj|BAI04396.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256641488|dbj|BAI07443.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256644543|dbj|BAI10491.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256647598|dbj|BAI13539.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256650651|dbj|BAI16585.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653642|dbj|BAI19569.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 494 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 117/488 (23%), Positives = 223/488 (45%), Gaps = 57/488 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLN 62 A F++ + LL GCT+ P+Y +P PL T ++ N++ + W + F D L Sbjct: 17 ACFAVSVGLLGGCTMIPKYKRPQPPLAQTWADYQHTDNVMLQKAASDIGWRDFFIDPRLQ 76 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-----------ISHRFIPN 111 +L+ IAL++N I QA I A+ A LFPS A+ F P Sbjct: 77 QLITIALRENRDIRQAAASIVEAQGRYDIQHAGLFPSIGATGGPMYQAPSDAAGLSFAPG 136 Query: 112 LKTNSTGQLD--------------SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIA 152 L + TG S ++ID+FG+ R E +LA ++ + V I Sbjct: 137 LDSAQTGTGMARNPFRFYQGGIGFSAYEIDIFGRIRSLSREAAEETLAQQEN-FRGVTI- 194 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++I+++ +YI ++ + +A L + ++L K+ G L++ + E ++ Sbjct: 195 --SIIAQVANAYIAWLGDRQAVVLAQNTLSSQQSTLQLIQDKYNHGEADLLTVRQAETQV 252 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + + IS L+G P L +N Q + + G+P+DL+ Sbjct: 253 AQSAGLLADSQRRVEQDENLISLLIGAPIPANLP---PPANLGQQTVLADVPAGLPSDLL 309 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK 329 RPDI E L + A IG A++ +P ++L +G +L F T W P Sbjct: 310 NRRPDIVQAEHDLLSAQADIGAARAAFFPRITLTASDGISSLQFHKLFTSAATTWGVNPN 369 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTK 385 + +P++ G+ N++ +++ + T+++TV A +EV +AL ++E K++ Sbjct: 370 IQIPLWTWGQNSGNLKASKARRDSKITTYEKTVQTAFREVADALAGRKAYLDEQKEVDAL 429 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV---EVDLSIAKRQLAKSYVDL 442 + + + ++ L+ + Y G S L L+ +RA + ++ + +++ Q + V L Sbjct: 430 VNASGDAYR----LAKMRYEAGIDSYLTTLESQRAYLQAQQNQISVDVSRYQ---NLVTL 482 Query: 443 YIAIGSGY 450 Y ++G G+ Sbjct: 483 YRSLGGGW 490 >gi|251789080|ref|YP_003003801.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya zeae Ech1591] gi|247537701|gb|ACT06322.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya zeae Ech1591] Length = 480 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 111/462 (24%), Positives = 212/462 (45%), Gaps = 28/462 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLP-TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 SL LLAGC++ P Y +P P+ Q S G ++ ++ +L W E D L +L+ + Sbjct: 13 SLMAALLAGCSLAPAYERPDAPVAKDRQQSTGETR--VSATSLNWHELVQDGHLRELIAL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD---- 121 +L++N + Q + A + R+ P AS + + P N++GQ Sbjct: 71 SLKENRNLRQTLLNVEATRAQYQIQRSSRLPDLQLQASETRQRTP-ADLNTSGQSGIAGS 129 Query: 122 -------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +++DLFG+ + SS L + Y + A+++++S++I +Y+ Sbjct: 130 FQAGVGMTSFELDLFGRVHDLSSSAFEEYLATEYGSRN-AEISLVSEIIQAYLVRDGALN 188 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R ++ + L+ ++++ L + G S+ + ++ + E+ R + + Sbjct: 189 RQRLSEETLENRQQSLTLISARLNAGTASEQDYQDALGLAEQAKAVLAGAEREVRQSTNA 248 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L G + Y+ Q+ + +P + I G+P+DLI RPD+ E +L A I Sbjct: 249 LVLLSGVRNID--RYLSTQATD-KPVIVQSIAPGVPSDLITGRPDVIAAEHRLMARNADI 305 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G A++ +P +SL G +A T G WSF P++ LP+F G+ ++N+ A Sbjct: 306 GAARAAFFPRISLTG-VAGTSSAELSGLFGAGQGMWSFMPQVSLPLFSGGRNRANLELAS 364 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++T+ A +EV +AL + + + + V K+++++ Y G Sbjct: 365 LRKDAAIAAYEQTIQTAFREVADALAAKDTLNREEAARKALVASDNKALAIARARYSAGV 424 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L L ER T E+ L Q ++ V L+ A+G G+ Sbjct: 425 DDYLRYLQSERNTFDNELALISTMTQRQQAIVSLFTALGGGW 466 >gi|91782469|ref|YP_557675.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91686423|gb|ABE29623.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 119/469 (25%), Positives = 229/469 (48%), Gaps = 44/469 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++ L+ C++ P+Y P P+ ++G ++ ID WW+ + D L+ L Sbjct: 13 VMALSACSLAPQYQVPPTPVAAQYKTVGPWTAAQPADRIDRNGWWKMYGDAQLDTLETSL 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-----------FIPNLKTNS 116 L N + A A+ + V + L+PS S +++ R PN + Sbjct: 73 LANNTDLRAAYAHYAQAQAFVAQVESGLYPSISASAVPQRDRQSDNRPLRAGGPNDYNSV 132 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIA--KLNVISKLIPSYIDARHFKER 173 T + ++ +DL+G+ R +S +A D A A + D+A +L++ L SYI R ++ Sbjct: 133 TLGGEVNYDLDLWGRVR--DSVVAGKDEAQATKADLASVQLSLQVTLADSYIRLRGLDQQ 190 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + Y K ++L+ G S L + + + ++ S +S + + H I Sbjct: 191 TDLLNETVAAYAKALQLTQTLHNGGIVSGLDVSRAQTQLSSAKSQLSQNLAQRALIEHAI 250 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G A+EF Q + L IP G+P+ L++ RPD+ E+++A++ AKIG Sbjct: 251 AVLVGASASEFSLPQQTTAIAL---LAIPT--GLPSTLLQRRPDVAAAERRVAEANAKIG 305 Query: 294 IAKSDLYP--SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +A++ +P +LSL G + ++ G N W+ GP+L +FD G ++ + A Sbjct: 306 VARAAYFPDITLSLQGGV---QSAAYAGLVSAPNLFWAIGPQLVQYVFDGGYRRAQLDAA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ +E ++ VL+A ++VE+ L ++ + + + A + S+ L++ YRQG Sbjct: 363 KAATEEAGERYRGVVLSAFQQVEDNLALLSYLGTALGEQRDAASAAQYSVDLALRQYRQG 422 Query: 408 RYSLLDILDIERATAKVEVD-----LSIAKRQLAKSYVDLYIAIGSGYN 451 LD++ + V++D L I RQL+ + V L A+G G++ Sbjct: 423 TVGYLDVVQAQ----TVQLDAQRSLLDIQTRQLSAN-VQLLHALGGGWS 466 >gi|224368693|ref|YP_002602855.1| RND efflux transporter, outer membrane lipoprotein [Desulfobacterium autotrophicum HRM2] gi|223691409|gb|ACN14692.1| RND efflux transporter, outer membrane lipoprotein [Desulfobacterium autotrophicum HRM2] Length = 475 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 211/473 (44%), Gaps = 29/473 (6%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNL----INIDTLKWWE 54 NIL A + ++L AGC++ PEY +P +P++ PTQ + + + W Sbjct: 5 NILTAALAAMMILTAGCSMIPEYRQPDLPVVDAWPTQTASQMQDEAHGGGTQVPEIAWEA 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-- 110 F L KL+ AL N + A RI+ A+ RAD P S +S + + Sbjct: 65 YFESEPLRKLISRALDNNRNLRVALLRIDQARAAYRIQRADTLPVVSGGSSFAREGVTED 124 Query: 111 --------NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 N T S + +++D FG+ + + + +LA L + A ++ ++ +I++ Sbjct: 125 TSYTGSAYNSSTLSANVGVTAYELDFFGRVKSLNQEALATYLATGEAALNT-RIALIAET 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 ++++ K+ + +A + Y++ + K+ G+ ++L L + S+ES Sbjct: 184 ADAFLNYLANKKLLCLAKETCRAYQETYAVIKGKYEVGSVAELDLSQ---AATSVESAKV 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ + R+ + ++ T+ + Q + +G+P+ ++ RPDIR Sbjct: 241 SIARYTRLTAQARNAVILLAGTQVTDILDSGETIDQVRFLDTLPMGLPSKVLLQRPDIRQ 300 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFD 336 E L + A IG A++ LYP++ L G+ L D G W+F P L +PIF+ Sbjct: 301 AEHLLKAANADIGAARAALYPTIRLTGAFGLASDELSSLFTSGAAYAWNFTPSLSIPIFN 360 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + I++++ AE S + ++ V A KEV + L + + V +K+ Sbjct: 361 RAGIRASLEAAEVSERIAATEYEAVVQTAFKEVADQLAATKTYADQMRAQNALVAETRKT 420 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LS Y+ G L +LD +R+ E ++ S V++Y +G G Sbjct: 421 YILSRARYQNGIDDFLSVLDSQRSLFVAEQSAITVRQAYLSSQVNMYKVLGGG 473 >gi|289677852|ref|ZP_06498742.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 486 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L ++ ++++++ + + Sbjct: 122 -TGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|319796112|ref|YP_004157752.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315598575|gb|ADU39641.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 473 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 114/455 (25%), Positives = 209/455 (45%), Gaps = 26/455 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLTI 75 GC++ P Y +P P+ PT F S+ L W + F D L L++ AL N + Sbjct: 18 GCSLIPTYERPAAPV-PTTFPGDPSQPAGQAAAALPWQDFFTDPRLAGLIQTALANNRDL 76 Query: 76 LQATERINAAKENILSVRADLFPS-SYASISHRFIPN---LKTNSTGQLDSD-------- 123 + I A+ R+ LFP+ R PN +S G + S Sbjct: 77 RVSVLNIEQARAQFQIERSALFPALGLTGSGSRSSPNSFQAFDSSVGSVSSQYSVNFGFT 136 Query: 124 -WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D FG+ R + + +LA + A++++I+ + +I E + I Q + Sbjct: 137 AWELDFFGRIRALKDQALAQYLATEETRKAAQISLIASVATGWITLMADDELLEITRQTM 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++++ L+ L+F G +S++ +S + +++ + + ++ LLG P Sbjct: 197 VTREESVRLAKLRFDNGVSSEIDFQAANTAAESARATYAQQQRARMQDENALALLLGAPV 256 Query: 242 -TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + L K + +P +P G+P+D++ RPDIR E++L + A IG A+++ + Sbjct: 257 PADALSGGAKGLDGIKPMPDVPA--GLPSDMLIERPDIRAAEQQLIAANANIGAARANFF 314 Query: 301 PSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 P +SL I T F G + WSF P + LPIFD G+ + ++ +++ + Sbjct: 315 PRVSLTSGIG-TASTEFSGLFDRGSKAWSFAPTVTLPIFDAGRNWATLQSSKAGREIAVA 373 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ A +EV +AL + V + LS + YR G S LD+LD Sbjct: 374 QYEKSIQTAFREVADALAGRATLGEEVRAQRAQATAEAVRFKLSDLRYRNGIASALDLLD 433 Query: 417 IERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGY 450 +R+ + L++ R L ++ V LY +G G+ Sbjct: 434 AQRSLFTAQ-QLAVNARLLQLQNQVTLYKTLGGGW 467 >gi|153837458|ref|ZP_01990125.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ3810] gi|149749258|gb|EDM60043.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ3810] Length = 500 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 118/481 (24%), Positives = 224/481 (46%), Gaps = 54/481 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQ 71 LAGC VGP+Y P + T + N+ ++ D+ WW F+D LN++V+ Q Sbjct: 15 LAGCAVGPDYQAPTTSMAETYLNAENAG--LSTDSQHVEFWWTKFHDPVLNQMVQDMQSQ 72 Query: 72 NLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPN----------LKTNSTG 118 N+ + A ER+ A V + P+ ++++F N L + +G Sbjct: 73 NIPLKVAAERVKMANNYKTMVESFKVPTINLGAGYMNYQFSKNDSSLGPILNPLSDSVSG 132 Query: 119 -------------QLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI- 157 Q D W+ DLFG R +++ A + AQ+ + LN + Sbjct: 133 LPPQIGNVTLMDNQHDGVFAGASMAWEADLFG-RIDRQANAAQIRLEQAQIYQSGLNTVI 191 Query: 158 -SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + LI +Y+ + ER+ +A L+ ++ ++L G S L L + +A + ++E Sbjct: 192 TADLIHNYLQYQGASERLELAKSNLEDQRRTLDLVGKVVRSGYGSDLDLAQAKATLAAME 251 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R Sbjct: 252 SLVPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHS--VPVMQDMVPVGLPSDLLKRRT 309 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLP 333 DIR E+++A ++ + +D YP L G+ L + D+ F + W + Sbjct: 310 DIRLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSWN 369 Query: 334 IFDKGKIKS----NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 +FD G+ ++ N R +S+ +++Q TV A+ E E+ L + ++ ++ A Sbjct: 370 LFDGGRGEAIEAINQARFDSAT----LSYQHTVEAALAETESTLFTYGRSQENQRRIDDA 425 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ +++ + YR G L +LD +R ++ AK Q A++ + LY ++G Sbjct: 426 LKATNNAVNKAKSLYRAGLIDHLSVLDAQRQQRMMQDQQVAAKLQTAQATIALYKSLGGD 485 Query: 450 Y 450 + Sbjct: 486 W 486 >gi|91779358|ref|YP_554566.1| major facilitator superfamily multidrug efflux pump, outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91692018|gb|ABE35216.1| MFS multidrug efflux pump, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 477 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 104/433 (24%), Positives = 211/433 (48%), Gaps = 20/433 (4%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ ++ ++ D WW F D +++LV+ L NL + A ER+ A++ Sbjct: 39 PAAWNVDAPQDSVSADA--WWAQFGDPVMHQLVESVLTGNLDVQAAVERVKQAQDLATQN 96 Query: 93 RADLFP----SSYASISHRFIPN----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLD 143 RA L P S+ AS S + P ++ G + + W D+FG +R + ++ A + Sbjct: 97 RAALLPELNASASASDSRQNAPPPLGYVRQAGFG-VTASWTPDVFGGERLAVLAAQAQVS 155 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 A ++ +L + + +YID R + ++ I + + + ++L+ + G +++L Sbjct: 156 GRQAALNQVRLALAANTAAAYIDLRWAQSQLQILNDNEQIRARALKLTQARLHYGLSTQL 215 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP 262 + + + +++ +++ IP ++ + + + I+ G + + + P +P Sbjct: 216 DVARAQNQLEDLQAQIPRVQSAVQHQLSLIAVYSGRTPESVDSLLLAHARDIPVPAQSVP 275 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 + P+ + RPD+R + A++G++K+ YP LN + L +S+ G T Sbjct: 276 QML--PSQALLQRPDVRTAYATVEQRAAEVGVSKAQRYPQFRLNLADGLLA-SSYLGLPT 332 Query: 323 H----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 +S PIF+ G+I +NI +ES +E + Q+T+L A+KE+E+ + + Sbjct: 333 LTDNLFSAALNATSPIFNAGRITANIDASESRMRESQLGLQQTMLQALKEIEDNRSDLVS 392 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 V +L A++ ++ LS Y+ G S LD+L + A + L+ AKR+ A S Sbjct: 393 GAVQVQRLGGALDASDHALRLSTELYKGGASSFLDVLAAQEAYLRDAESLNQAKREHALS 452 Query: 439 YVDLYIAIGSGYN 451 V LY ++G G++ Sbjct: 453 AVALYRSLGGGWD 465 >gi|313498727|gb|ADR60093.1| Outer membrane lipoprotein [Pseudomonas putida BIRD-1] Length = 464 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 119/468 (25%), Positives = 217/468 (46%), Gaps = 49/468 (10%) Query: 20 VGPEYTKPHM-----------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 VGP+Y +P + PL + S+G+ +D WWE F D L++LV A Sbjct: 2 VGPDYKQPEVALADHYVTDAQPLTASDTSVGS------LDV--WWEGFGDPLLSRLVTEA 53 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---------NSTGQ 119 L QNL + QA R+ A+ + S A L PS A I+ + + ++ NST Sbjct: 54 LGQNLQLAQAQARVAQARAALGSATAALVPS--AGINGQAARSRQSVEAPLGQLLNSTPD 111 Query: 120 LD-----------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 D + W+IDLFG RR ++++ ++ A +L V ++ Y Sbjct: 112 YDRYGNSYELNLQASWEIDLFGGLRRDRQAAVGEYQASEAVAIATRLAVAAQTADIYTTV 171 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + R++IA + + + +L +G + + E E+ +E+ +P L Sbjct: 172 RGLQARLAIAQNQVQTQQDLLAKVNLLNRKGLAPDYEVRQTEGELSQVEATVPVLRAGLD 231 Query: 228 MNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + +LG P T H Q + P + IG P+DL+R RPD+ E++L Sbjct: 232 AALNALDVMLGSAPGT---HRAQMAMASSIPQVPALAQIGKPSDLLRRRPDLIAAERRLM 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A S+ YP S+ G I + P G + L +FD G+I + Sbjct: 289 AANAMIGSAISEYYPKFSIGGLIGSASTSGGPFFTGDANQSAVLLGLRWRLFDFGRINAQ 348 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I +A+ E ++++VL A ++VE AL+++ + L+ +++ S + Sbjct: 349 IDQAKGREAEALALYRQSVLEASEDVETALSALINRQAQAQSLKRGEASLERARRSSFVA 408 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G SL+D+L+ ++ + ++A+ + A++ + Y+A+G G++ Sbjct: 409 FQNGVASLIDVLNADQQLLRTSDSRAVAQTEAARAAIAAYLALGGGWS 456 >gi|254522900|ref|ZP_05134955.1| outer membrane transport protein involved toxic tolerance [Stenotrophomonas sp. SKA14] gi|219720491|gb|EED39016.1| outer membrane transport protein involved toxic tolerance [Stenotrophomonas sp. SKA14] Length = 481 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 107/455 (23%), Positives = 214/455 (47%), Gaps = 34/455 (7%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC T+ P+ T P +P Q+ ++ + ++ + W + F D L +++ +LQ N Sbjct: 38 GCSTLVPKNTA-VAPAIPAQWPAEATQGQVADVAAVGWRDFFTDARLQQVIDQSLQNNRD 96 Query: 75 ILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSD 123 + A + A+ RAD P + A ++ +F S G ++ Sbjct: 97 LRVAVLNVERARGQYRVQRADRVPGVAVTGQMQRQGTDAGVTEQF-------SAGVGVAE 149 Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R++ E++L + A A+L+++++ +++ +R+ IA L Sbjct: 150 FELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGADAQRLKIADATLK 209 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y+ ++ L+ + +G +S L L + +++ +D L + + ++ L G Sbjct: 210 TYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQDRNALALLAGGQLD 269 Query: 243 EFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L ++ +P L P G+P+D++ RPDI E +L + A IG A++ + Sbjct: 270 PSLL-----PDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANIGAARAAFF 324 Query: 301 PSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL GSI N F WSF PK+ LPIF GK+++N+ A + Sbjct: 325 PSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAIANADRDIALAQ 384 Query: 358 WQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +E +AL +++ D+++ ++ Q V+ +++ LS Y G S + +LD Sbjct: 385 YEKSIQVGFRETADALALNVSLDEQVSSQ-QRLVDAAEQANRLSQARYDAGLDSFVTLLD 443 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + A+ + + LY +G G++ Sbjct: 444 ARRTAYNAQQTQLQAQLAQQANRITLYKVLGGGWH 478 >gi|293606422|ref|ZP_06688781.1| outer membrane multidrug efflux protein OprB [Achromobacter piechaudii ATCC 43553] gi|292815180|gb|EFF74302.1| outer membrane multidrug efflux protein OprB [Achromobacter piechaudii ATCC 43553] Length = 505 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 118/491 (24%), Positives = 223/491 (45%), Gaps = 56/491 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL---PTQFSI--GNSKNLINIDT----------- 49 A+ + V LAGC++ P+Y +P P+ P Q + G N ++ T Sbjct: 10 ALSAFVAVALAGCSLAPDYQRPDAPVTGVWPDQPKVQYGGYNNPTSLGTQPASAVVPEAG 69 Query: 50 -----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 L W E F D L +L+ ++L N + A +R+ A+ R +PS A I Sbjct: 70 IPAADLGWREFFRDPRLQRLISLSLVNNRDLRVAVQRVEEARAQYGVQRGAQWPSIGAGI 129 Query: 105 S--HRFIP-NLKTNS-----------TGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQ 148 + +P N++ G + ++IDLFG+ R++ + L + AQ Sbjct: 130 QGQRQHLPANMRAGGPDSSSISSSYQAGIGLTTFEIDLFGRLRNLSEAAYQQYLSTEQAQ 189 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + ++ ++ + SY + R + ++ + + L +++ L +F G S+L L + Sbjct: 190 KTV-QITLVGSVAQSYFNLRAAEVQLDLTQRTLASRQESYNLVKRRFDGGVASELDLNQS 248 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGI 267 ++ + + SD+ L ++ ++ + L+G P L ++ F + L + G+ Sbjct: 249 KSLLDTASSDLAQLARARAQALNALVLLVGTPLPADL----PEAATFGRDQLLATVPSGL 304 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHW 324 P+DL+ RPDI E +L + A IG A++ +P++SL G + + + F G +W Sbjct: 305 PSDLLERRPDILAAENQLKSANANIGAARAAFFPTISLTGLLGVASPSLGDLFKGGQGYW 364 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF P + P+F G I+ + A++ +++T+ A +EV +AL + Sbjct: 365 SFSPSITTPLFAGGSIREGLNLAKARDNIAVAQYEQTIQQAFREVSDALAGEATYGAQLD 424 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK--SY 439 + E +++ LS + Y G S L + TA+V+ LS+ + LA + Sbjct: 425 AQRALQESSSRTLELSNLRYTNGIDSYLQV-----QTAQVDFFNAQLSLVQTGLAALINR 479 Query: 440 VDLYIAIGSGY 450 V+LY A+G G+ Sbjct: 480 VELYKALGGGW 490 >gi|172065025|ref|YP_001815737.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997267|gb|ACB68184.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 497 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 116/475 (24%), Positives = 217/475 (45%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSIGNSKN-----LINIDTLK---WWES 55 R + +L +V LA C+ P Y+ P + +P ++ + D WW Sbjct: 11 RRVVALGVVTALAACSTLPPYSPPTV-AVPAHYAGAPAAQPGWQVAAPADAASRGAWWTV 69 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN- 111 FND LN L N T+ +A + A+ + A P+ A ++ R N Sbjct: 70 FNDADLNALEARVDVSNQTVKKAVADLEQARATVDYQHAGFLPTVTAGVAQSRSRISRNK 129 Query: 112 LKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L ++ G+ D W+ D+FG+ R + + AN D++ A + KL+V ++L Sbjct: 130 LGSSLAGKTTPDHQLGVAASWEPDVFGRVRDAVAGAQANADASAADLQAVKLSVTAELAT 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y R + + + Y ++L + GA ++ + E ++++ + + Sbjct: 190 DYFALRSLDTQKQLLDDSVRAYADALKLLQQQLAAGAIDASAVAQAETQLEATRTQDTDI 249 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + S H I+TL+G A+ F + Q+ + +P I G+P+ L+ RPDI Sbjct: 250 DASRAQLQHAIATLVGENASTFALPPRVQAFD------VPAIPAGVPSQLLERRPDIAAA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKG 338 E+++A + A+IG A++ +P L L+ S L P + WS GP+L +FD G Sbjct: 304 ERRVATANAQIGEARAAFFPDLVLSASAGLESGFFMPWLTAPSLFWSLGPQLVGTLFDGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + +R A + + +++TVL A ++VE+ L++++ Q A + S+ Sbjct: 364 RRSATLRGAHAQYDGEVADYRQTVLGAFQQVEDQLSALDALASEAASQQRATDAADLSLR 423 Query: 399 LSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + G S LD++ + T + + D IA R++ ++ V L A+G G++ Sbjct: 424 LTTNRFNAGAVSYLDVVTAQTIALTNRRQAD-QIAARRM-EAAVGLLKALGGGWH 476 >gi|167566709|ref|ZP_02359625.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 494 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 209/470 (44%), Gaps = 39/470 (8%) Query: 14 LLAGCTVGPEYTKPHMP----LLP-----TQFSIGNSKNLINIDTL---KWWESFNDTSL 61 L+AGC VGP++ +P P +P T F+ + D WW F + Sbjct: 27 LVAGCAVGPDFVRPEPPHVDAFVPDGAARTSFTASGATQTFAPDAPLPDAWWRLFGSPEI 86 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIP-------- 110 + V A + T+ A + ++ +++ +P + + R++P Sbjct: 87 DAAVDDAFAGSATLAGAQATLRRSEHELMAGAGVFYPQVDAQAGASRQRYVPLRTGANLP 146 Query: 111 ----NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL T ST + +D++G +RR +E A D+ + A+L + S ++ + I Sbjct: 147 ASIFNLFTLST---TISYALDIWGGERRGVEGLAAQADAQRHALAAARLTLASNVVNTMI 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + I++ +++ L + I L+ + + G ++ +++ L+A S+++ +P LE+ Sbjct: 204 ARAAYADEIAVTRELIALTDEQIRLTRAQVSAGTSAYSAVLALDASRASLDASLPALEQK 263 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++TL G YPA + P L P + P++L+R RPDI E Sbjct: 264 IGQADDLLATLAGRYPAERAPPKLSLADIALPPRL--PQTV--PSELVRRRPDILQAEAA 319 Query: 285 LADSVAKIGIAKSDLYPS--LSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG+A + L+PS LS +G T S F WS G + P+F G + Sbjct: 320 LHAASANIGVATAALFPSVTLSASGGFDATRLPSLFNAAGKTWSVGAGITAPLFHGGALW 379 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A + E +++ VL+A +V + L +++ D + A++ ++++ L Sbjct: 380 YQRKAAIDAFDESSAAYRQVVLSAFAQVADTLRALDHDAAGLDAQARAMDAAREALRLVT 439 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 I Y G L +L ++ + + A Q + V LY A+G G++ Sbjct: 440 IEYETGTAGYLQVLTADQQYRQARLAWVQASAQRLQDTVALYAALGGGWD 489 >gi|330820842|ref|YP_004349704.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] gi|327372837|gb|AEA64192.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] Length = 504 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 47/463 (10%) Query: 21 GPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIALQQNLTI 75 GP Y KP M L P F G + + WW ++D +L L++ + + N +I Sbjct: 25 GPHYRKPTMDL-PLAFKEGADWQRAEANPQASLSSSWWLDYHDATLTDLIERSQRANQSI 83 Query: 76 LQATERINAAKENILSVRADLFPSSYASIS----------------HRFIPNLKTNSTGQ 119 QA A + + RA LFP+ A++S + NL + S Sbjct: 84 AQAEAAYRLALATVTADRASLFPTVDANLSGTRSGSGANAASSGSSQAGVSNLASTS--- 140 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W++DL+G RR IESS A+ ++ AQ+ +L++ + L Y++ R I + Sbjct: 141 LTASWELDLWGSVRRQIESSKASAQASDAQLAGERLSIAASLAIDYLELRQADVDIDLLT 200 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVK----LEAEIKSIESDIPTLEKSFRMNVHNIS 234 Q + ++ +E++ F G +S ++ LE I S++S T E+ + H I+ Sbjct: 201 QQRRIDERILEMTRRGFALGTSSNDDVLNAQDTLELVIASLQSTRITREQ----DEHAIA 256 Query: 235 TLLGYPATEFLHYMQKQSNNFQPN--LYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G F S +P+ +P + + +P+ L+ R D+ E+ A + AK Sbjct: 257 VLVGVAPGGF-------SIEPRPDYAFALPAVPLALPSQLLERRYDVVSAERTAAAANAK 309 Query: 292 IGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A++ +P+L+L+ H+ N F + W+ GP L IFD G + +R A Sbjct: 310 IGVAEAAFFPTLTLSAEGGFQHNTLANLFTVPSRFWTLGPTLAATIFDGGARTAAVREAR 369 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ E ++++TVL A + VE++L+S+N + +++ + R G Sbjct: 370 ATYDEDVASYRQTVLGAFQNVEDSLSSLNHLQDQARSYAGIYRRNQQLFDSASAQQRIGT 429 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S D+L + + +L + L++ V L +G G+ Sbjct: 430 ASEQDLLTQQLTLIQARQNLEDTRALLSQGSVSLIRNLGGGWQ 472 >gi|289678867|ref|ZP_06499757.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. syringae FF5] Length = 323 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 164/326 (50%), Gaps = 8/326 (2%) Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y E + IA + L+ Sbjct: 2 YQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICAANEELDIARESLE 61 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 L K+++ L+ G + + + + + KS+ +++P E + + +S LL P Sbjct: 62 LQKQSVSLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAAMFRLSMLLAKPVE 121 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + + + N P++ + +G A L++ RPD+R E+ LA S A+IG+A +LYP Sbjct: 122 QLPAGVS--TCNQLPHIAQVMPVGDGAALLKRRPDVRQAERHLAMSTAEIGVATGELYPD 179 Query: 303 LSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +S+ SI T + P N W FGP L I G ++ I +AE+SAQ + Sbjct: 180 ISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQAEASAQAALARFD 237 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 VLNAI+E + L L+ A + K++ + Y+ GR S L L R Sbjct: 238 GVVLNAIRETQTGLAQYTALLDRRDALKDAEQSAKEAADQTHRFYQAGRASFLADLQATR 297 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIA 445 V ++ A Q+A ++L++A Sbjct: 298 TYTDVRAQMAEANTQVAMGQINLFLA 323 >gi|330981513|gb|EGH79616.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 486 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L ++ ++++++ + + Sbjct: 122 -TGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDYSKIQKEINVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|145600545|ref|YP_001164621.1| outer membrane efflux lipoprotein [Yersinia pestis Pestoides F] gi|145212241|gb|ABP41648.1| outer membrane efflux lipoprotein [Yersinia pestis Pestoides F] Length = 468 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 106/458 (23%), Positives = 215/458 (46%), Gaps = 29/458 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC ++ P+Y +P P+ T +S +S +I W E+ D L +++ +AL+ Sbjct: 12 ALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADI---PWQETIIDPKLRQVIALALE 68 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD--------- 121 N + QA I AA+ RA P+ A ++ L S G + Sbjct: 69 SNRDLRQAIADIEAARAQYGVQRAAQIPTVNAGVNGSRGRGLSDTSDGNNNTAISQSYGA 128 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERI 174 S +++DLFG++ + S A ++ A + AK + +I+ +++ + ++ Sbjct: 129 QASVSAFELDLFGKKSSL--SHAEFETYLATEEAAKTTRITLIADTATAWVTLAADQNQL 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L +++++L+ L+ G S++ + +E +S +D+ + + + + + Sbjct: 187 LLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQDKNALD 246 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P H + ++ P + + +G+ +D++ NRPD+ E KL + A IG Sbjct: 247 LLVGQPVAA--HLLPVTASTL-PEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANANIGA 303 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ L+PS++L S ++ + WS P + LPIFD G ++ + +++ Sbjct: 304 ARAALFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQAQK 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ + A KEV +AL ++ Q V ++S+ L+ Y+QG + Sbjct: 364 TGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGIDTY 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R + L ++ + + LY +G G Sbjct: 424 LNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGG 461 >gi|91789282|ref|YP_550234.1| RND efflux system outer membrane lipoprotein NodT [Polaromonas sp. JS666] gi|91698507|gb|ABE45336.1| RND efflux system, outer membrane lipoprotein, NodT [Polaromonas sp. JS666] Length = 470 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 203/460 (44%), Gaps = 30/460 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF---------SIGNSKNLINIDTLKWWESFNDTSLNK 63 ++LAGC +P P F + S + + T WW+ F D L++ Sbjct: 19 LVLAGCATSASIDASSLPKAPQAFKENASQVASATATSAQVQSQGT--WWKVFADPVLDQ 76 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL--- 120 LV+ A + N ++ A R+ A+ + AD P N T + Q Sbjct: 77 LVEQAGRNNNSVQVAAGRLAQARAIARNTDADRLPQVGLGAGATRQSNATTGNVPQTVVS 136 Query: 121 ---DSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + +++DLFG + + S A+LD S A + KL V + + +Y++ R S Sbjct: 137 ANANFSYEVDLFG-KLSLNSDAASLDAQSREALLRSTKLLVQADVAQTYLNLRALDTERS 195 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L Y+ + L+ ++F +G ++L + ++ AE+ S ES+ L++ H ++ Sbjct: 196 LVRDTLQAYRNTLRLTEVRFKEGDVAELDVARVRAEVASTESEALALDRRRAELEHALAV 255 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A+ F Q + +P I G+P+ ++ RPD+ + + + A+ G+ Sbjct: 256 LVGEVASSF------QVAPAEWTTALPVIPAGVPSTVLVRRPDVSAAQSTMQAAQARAGV 309 Query: 295 AKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ +P+ SL G A + F W G L LPIFD G+ ++ ++ A + Sbjct: 310 AKAAWFPTFSLTATGGYAAPEISDLFKLSTRAWGVGALLSLPIFDGGRREAGVQNANAEL 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++E +L A K+VE+ L ++ +V ++ LS YR G S Sbjct: 370 DIALANYREQILVAFKDVEDQLAALRLLADQSEAQSRSVASATRATVLSDSRYRNGFVSQ 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++LD +R+ + K + V L A+G G++ Sbjct: 430 LELLDAQRSELRNRRQALQVKASQYLATVGLIRALGGGWS 469 >gi|53722957|ref|YP_111942.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|76818795|ref|YP_336195.1| RND efflux system, outer membrane protein [Burkholderia pseudomallei 1710b] gi|121597458|ref|YP_990909.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|126445784|ref|YP_001077374.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|126457067|ref|YP_001076661.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|217422306|ref|ZP_03453809.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|226195690|ref|ZP_03791277.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|237507675|ref|ZP_04520390.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|238563264|ref|ZP_00439157.2| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|242311694|ref|ZP_04810711.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254176499|ref|ZP_04883157.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254185930|ref|ZP_04892448.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|254202900|ref|ZP_04909262.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|254208236|ref|ZP_04914585.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|254262414|ref|ZP_04953279.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|52213371|emb|CAH39414.1| putative outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|76583268|gb|ABA52742.1| RND efflux system, outer membrane protein [Burkholderia pseudomallei 1710b] gi|121225256|gb|ABM48787.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|126230835|gb|ABN94248.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|126238638|gb|ABO01750.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei NCTC 10247] gi|147745945|gb|EDK53023.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|147750923|gb|EDK57991.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|157933616|gb|EDO89286.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|160697541|gb|EDP87511.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|217394537|gb|EEC34556.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|225932175|gb|EEH28175.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|234999880|gb|EEP49304.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|238521046|gb|EEP84501.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|242134933|gb|EES21336.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254213416|gb|EET02801.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 508 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 70 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 129 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 130 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 186 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 246 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 247 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 302 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 362 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 421 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 422 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 481 Query: 448 S 448 Sbjct: 482 G 482 >gi|296159626|ref|ZP_06842449.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295890070|gb|EFG69865.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 120/469 (25%), Positives = 230/469 (49%), Gaps = 44/469 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + L+ C++ P+Y P P+ ++G ++ ID WW+ + D L+ L Sbjct: 13 VAALSACSLAPQYQVPPTPVAAQYKTVGPWTTAQPADRIDRNGWWKMYGDAQLDTLETSL 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-----------FIPNLKTNS 116 L N + A A+ + V + L+PS S +++ R PN + Sbjct: 73 LANNTDLRAAYAHYAQAQAFVAQVESGLYPSVSASAVPQRDRQSDNRPLRAGGPNDYNSV 132 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIA--KLNVISKLIPSYIDARHFK 171 T GQ++ D +DL+G+ R +S +A D A A + D+A +L++ L SYI R Sbjct: 133 TLGGQVNYD--LDLWGRVR--DSVVAGKDEAQATKADLASVQLSLQVTLADSYIRLRGLD 188 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ + ++ + Y K ++L+ G S L + + + ++ S +S + + H Sbjct: 189 QQTDLLNETVAAYAKALQLTQTLHNGGIVSGLDVSRAQTQLSSAKSQLSQNLAQRALIEH 248 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G A+EF Q + + +P I G+P+ L++ RPD+ E+++A++ A Sbjct: 249 AIAVLVGASASEFSLPQQTAA------IALPAIPTGLPSTLLQRRPDVAAAERRVAEANA 302 Query: 291 KIGIAKSDLYP--SLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 KIG+A++ +P +LSL G + + + N W+ GP+L +FD G ++ + A Sbjct: 303 KIGVARAAYFPDITLSLQGGVQSAAYAGLVSAPNLFWAIGPQLVQYVFDGGYRRAQLDAA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ +E ++ VL+A ++VE+ L ++ + + + A + S+ L++ YRQG Sbjct: 363 KAATEEAGELYRGVVLSAFQQVEDNLALLSYLGTALGEQRDAASAAQYSVDLALRQYRQG 422 Query: 408 RYSLLDILDIERATAKVEVD-----LSIAKRQLAKSYVDLYIAIGSGYN 451 LD++ + V++D L I RQL+ + V L A+G G++ Sbjct: 423 TVGYLDVVQAQ----TVQLDAQRSLLDIQTRQLSAN-VQLLHALGGGWS 466 >gi|187926402|ref|YP_001892747.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|241665889|ref|YP_002984248.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] gi|187728156|gb|ACD29320.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|240867916|gb|ACS65576.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 510 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 109/434 (25%), Positives = 203/434 (46%), Gaps = 51/434 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+ FND +L+KL A + + T+ A R+ A+ + + RA LFP A Sbjct: 72 WWKIFNDPTLDKLEAQAAEASPTLAAAAARVTQARAFVQANRASLFPELDVGFGPTRQRA 131 Query: 103 SISHRFIP-----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +P +T Q +++DLFG+ R +I+++ A+ + A A+L + Sbjct: 132 SAASAGLPVGAPVQPQTYWRAQSTVAYEVDLFGRVRNNIDAAGADAERVEALYRAARLTL 191 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + L ++ ++L +F G +L + + +AE+ + Sbjct: 192 QADVAQTYFSLRTLDAEEALLSRTLVGREEALKLVQRRFNTGDIGELDVARADAELATAR 251 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 SD +++ + H ++TLLG +F ++ Q + + + G+P+ L+ RP Sbjct: 252 SDRIGVQRRRAVLEHALATLLGKAPADFTM----GADPLQ-SAEVRVPAGLPSALLERRP 306 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH------------W 324 D+ E+ +A + A+IG+A++ +P L L G GY +H W Sbjct: 307 DVAAAERSMAAANARIGVARAAFFPQLQLTGGF---------GYESHDIGDLLKWGSRTW 357 Query: 325 SFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 GP L LPIFD G + +++A ++ +E ++E+VL A +EVE+ L+ + Sbjct: 358 ILGPLVGTALSLPIFDGGARSAGVKQARAAYEENVANYRESVLVAFREVEDNLSELRLLA 417 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAK 437 AV ++ LS Y G + LD++D ER + ++ V L+ ++ Sbjct: 418 DQAKAQDDAVRASTRAAQLSRTRYNAGSVNYLDVIDAERNMLSAERIGVQLAGSR---VN 474 Query: 438 SYVDLYIAIGSGYN 451 S V L A+G G+ Sbjct: 475 STVGLIKALGGGWG 488 >gi|238920015|ref|YP_002933530.1| copper/silver efflux system outer membrane protein CusC [Edwardsiella ictaluri 93-146] gi|238869584|gb|ACR69295.1| cation efflux system protein CusC [Edwardsiella ictaluri 93-146] Length = 460 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 219/461 (47%), Gaps = 32/461 (6%) Query: 11 FIVLLAGC-TVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTLKWWESFNDTSLNKLV 65 ++ L GC ++ PEY +P +P+ QFS G++ + + D W + F D L+ Sbjct: 11 MVLTLTGCVSLAPEYQRPALPV-GAQFSSAAAAGDTASTYDRDQ-GWRQFFRDAQARSLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---TNSTGQLDS 122 AL N + QA + A+ + +AD +P A+ + L+ +N QL Sbjct: 69 DEALLNNRDLQQAVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGASNREYQLGG 128 Query: 123 --DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + +DLFG+ + + + L S AQ + L ++S + +Y + + IA Sbjct: 129 ALGFDLDLFGRLQSMSAREQQNFLASQQAQRAVHIL-LVSNVAQAYFTQQLAYAQRRIAQ 187 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ L + G+ + L+L + ++ + ++ + E H I L+G Sbjct: 188 ETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANHAIQRLVG 247 Query: 239 -YPAT-EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 Y T L ++ P + + + +P+ ++ RPDI E L + A IG A+ Sbjct: 248 VYGGTPRDLRGLES------PVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAAR 301 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL+G + + + F WSF PK+ LPIF+ G+ ++N++ AE Q+ Sbjct: 302 AAFFPSISLSGGLNSSGSDLAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQQ 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ + A KEV++AL++ +T Q ++ + ++ + Y G S L+ Sbjct: 362 SVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDAIQATLVRARGLYAHGALSYLE 421 Query: 414 ILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ERA T + +DL +++ + + L+ A+G G+ Sbjct: 422 VLDAERALFTTQQTLLDLRYSQQ---ANEITLFAALGGGWQ 459 >gi|296156103|ref|ZP_06838942.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295893609|gb|EFG73388.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 485 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 112/471 (23%), Positives = 213/471 (45%), Gaps = 32/471 (6%) Query: 5 RAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI---DTLK---WWESFN 57 RA+ + I LL+ C+ P Y +P + P ++ G + D WW FN Sbjct: 13 RALAATLIGALLSACSTLPPYQRPSAEI-PAHYA-GAAPGWAQAAPGDAAPRGPWWTIFN 70 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKT 114 D L++L N T+ +A ++ A+ + RA FP+ A ++ +R N++ Sbjct: 71 DPVLDQLEARIDISNQTVRKAVAQVQQARSMVDYQRAGFFPTITAGVAQDRYRTSQNVEG 130 Query: 115 NS---------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 S + + + W+ DLFG+ R + + A+ ++ A ++ +L + + L Y Sbjct: 131 KSLAGKTVPDYSAGVAASWEPDLFGRVRDSVNGAQADAQASEADLEGVRLAMSADLAIDY 190 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + + Y ++L + GA ++ + ++++ + ++ Sbjct: 191 FSLRSLDTQKKLLDDSVSAYAAALKLLQQQLKNGAIDASAVAQATTQLEATRTQDTDIDV 250 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H I+TL+G PA+ F + + P P G+P+ L+ RPDI E++ Sbjct: 251 TRSQMQHAIATLIGEPASSFT--LPPNGSAVTPPAIPP---GLPSQLLERRPDIAAAERR 305 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIK 341 +A + A+IG+A + +P L L+ S L P + WS GP+L +FD GK K Sbjct: 306 VASANAQIGVAHAAFFPDLVLSASAGLESSFFAPWLSAPSLFWSLGPQLAGTLFDGGKRK 365 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ A + ++++VL A ++VE+ L++++ Q A S+ L+ Sbjct: 366 ASLHGATAQYDGAVADYRQSVLVAFQQVEDNLSALHSLADEAVSQQRATTAADLSLQLTT 425 Query: 402 INYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S LD++ + A + + IA RQL +S V L A+G + Sbjct: 426 NRFNAGAVSYLDVVTAQTIALSNQRIADQIAARQL-ESSVLLLEALGGTWG 475 >gi|118475170|ref|YP_891327.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter fetus subsp. fetus 82-40] gi|118414396|gb|ABK82816.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter fetus subsp. fetus 82-40] Length = 482 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 31/464 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ L +AGC++ P+ ++ Q + ++ +I+ KWWESF D LN L+ Sbjct: 5 ALILLIGAFVAGCSLKPD-------MIEIQQTYEYKFDVYSINE-KWWESFGDEKLNSLI 56 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--GQLDS- 122 AL+ N +L A I AK N+ +LFP+ +++ N + T GQ + Sbjct: 57 SQALKNNSDLLIALNNIEQAKINLNLANVELFPN--INLNGEATKNRSSGETYMGQDNKK 114 Query: 123 ----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++IDL+G+ R +S A + D A L++ S +Y K Sbjct: 115 YNAFSLNTALSYEIDLWGRVRDSANASEAIFKATKYDYDSAMLSIASTTANTYFMLISLK 174 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+ +I ++ L+ Y++ + + GA +L+ + +A + S ++ + ++ Sbjct: 175 EQENILNETLNTYEETLIYRQKELNAGAIDELTYYQAQAAVHSAKTQLIGIQTQIAQTNS 234 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 +S L+G + L Y S N P + +P GI +D++ +R DI ++L S Sbjct: 235 ALSVLVGKNLNDIL-YQSIDSPNTLPTMPEVPS--GISSDVLLHRADIASSLERLKASNF 291 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A++ P LSL G + D N F N + WS G + +P+ D G+ K+ + A Sbjct: 292 LVGVARTAWLPQLSLTGIFGFSSDEFNRFFVNNANIWSVGGSIMMPLLDFGRTKNRVELA 351 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++++ + V A E+ AL + +Q V+ K LS Y G Sbjct: 352 NLEQNASFLSYDKAVKTAFGEIRTALDTRKNSVLKEQSMQDLVKSQTKVYDLSKARYDDG 411 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ LD +R + L+ +K +A S VD+Y ++G G+N Sbjct: 412 YSTHLEFLDSQRNLLSARLSLAQSKLDVATSVVDVYKSLGGGFN 455 >gi|225423396|gb|ACN91217.1| CmeC [Campylobacter fetus] gi|225423401|gb|ACN91221.1| CmeC [Campylobacter fetus] Length = 471 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 31/464 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ L +AGC++ P+ ++ Q + ++ +I+ KWWESF D LN L+ Sbjct: 5 ALILLIGAFVAGCSLKPD-------MIEIQQTYEYKFDVYSINE-KWWESFGDEKLNSLI 56 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--GQLDS- 122 AL+ N +L A I AK N+ +LFP+ +++ N + T GQ + Sbjct: 57 SQALKNNSDLLIALNNIEQAKINLNLANVELFPN--INLNGEATKNRSSGETYMGQDNKK 114 Query: 123 ----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++IDL+G+ R +S A + D A L++ S +Y K Sbjct: 115 YNAFSLNTALSYEIDLWGRVRDSANASEAIFKATKYDYDSAMLSIASTTANTYFMLISLK 174 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+ +I ++ L+ Y++ + + GA +L+ + +A + S ++ + ++ Sbjct: 175 EQENILNETLNTYEETLIYRQKELNAGAIDELTYYQAQAAVHSAKTQLIGIQTQIAQTNS 234 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 +S L+G + L Y S N P + +P GI +D++ +R DI ++L S Sbjct: 235 ALSVLVGKNLNDIL-YQSIDSPNTLPTMPEVPS--GISSDVLLHRADIASSLERLKASNF 291 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRA 347 +G+A++ P LSL G + D N F N + WS G + +P+ D G+ K+ + A Sbjct: 292 LVGVARTAWLPQLSLTGIFGFSSDEFNRFFVNNANIWSVGGSIMMPLLDFGRTKNRVELA 351 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++++ + V A E+ AL + +Q V+ K LS Y G Sbjct: 352 NLEQNASFLSYDKAVKTAFGEIRTALDTRKNSVLKEQSMQDLVKSQTKVYDLSKARYDDG 411 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ LD +R + L+ +K +A S VD+Y ++G G+N Sbjct: 412 YSTHLEFLDSQRNLLSARLSLAQSKLDVATSVVDVYKSLGGGFN 455 >gi|187930862|ref|YP_001901348.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|187728906|gb|ACD30069.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] Length = 505 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 102/445 (22%), Positives = 207/445 (46%), Gaps = 42/445 (9%) Query: 12 IVLLAGCTVGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTL--KWWESF 56 +L C VGP++ P P LP Q S G ++ ++ + +WW++F Sbjct: 26 CLLTTACAVGPDFKTPEAPKVSGYTPQPLPHQTSTAATQGGEAQRFVSGMPVSDQWWKTF 85 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-----F 108 LNK + A+ + T+ A + A++ + + FP SY + Sbjct: 86 QSEKLNKTIANAIAASPTLAAAQAALRVAQQQTRAQQGAFFPMLQGSYQPSRQQNAVGTI 145 Query: 109 IPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P L + + T QL + D+FG RR +ES A D+ Y Q++ A L + S ++ Sbjct: 146 SPTLTSGAPIYTLHTAQLTVSYAPDVFGLNRRQVESLKATEDAQYFQMEAAYLTLASNIV 205 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + + + +I+ +I+D+ + ++ H +F GA + L + E + E +P Sbjct: 206 VAAVQEASLRAQIAAQQRIVDINTQLLDNLHKQFQLGAVTGLDVAAAETALAQAEQALPN 265 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRNRPDI 278 L+K + ++ L G +E + + F + +P + + +P+DL+R RPD+ Sbjct: 266 LQKQLAVQRDLLAALAGKLPSEGI------PDTFTFADFTLPKELPVSLPSDLVRQRPDV 319 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIF 335 R E++L + A++G+A +++ P L++ G+ T + F N WS + F Sbjct: 320 RAAEEQLHAATAQVGVAIANMLPQLTITGTKGGTAEIFSQMFRDGNVFWSLVGNVAQTFF 379 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G + + R A++ + ++ TV+ A + V + L +++ D ++ + + +K Sbjct: 380 DGGALLAKKRAADAGVDQAEAQYRGTVVTAFQNVADTLHALDADADVLKASLKSEQAARK 439 Query: 396 SMSLSMINYRQGRYSLLDILDIERA 420 +++++ G+ +LL +L+ E+A Sbjct: 440 TLNITDKQRAIGQVNLLAVLNAEQA 464 >gi|53716769|ref|YP_104978.1| RND efflux system, outer membrane protein [Burkholderia mallei ATCC 23344] gi|52422739|gb|AAU46309.1| RND efflux system, outer membrane protein [Burkholderia mallei ATCC 23344] Length = 506 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 68 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 127 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 128 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 184 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 185 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 244 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 245 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 299 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 300 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 359 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 360 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 419 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 420 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 479 Query: 448 S 448 Sbjct: 480 G 480 >gi|320108003|ref|YP_004183593.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319926524|gb|ADV83599.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 469 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 211/459 (45%), Gaps = 31/459 (6%) Query: 20 VGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 +GP+YTKP++ L LP + +K +++T WW F+D L +V+ AL QNL Sbjct: 1 MGPKYTKPNIQLAPFHNLPAVATQKTAKPAPHLET--WWTGFDDPILVTVVQRALDQNLD 58 Query: 75 ILQATERINAAKENILSVRADLFPSS---------YASISHRF------IPNLKTNSTGQ 119 + A R+ A+ + A L P+ + S+ + F +P K + Sbjct: 59 LAAAFARVRQARAAAAAAGAQLKPTVDLGATGTALHQSVVNNFGSVANGLPGYKRDEREY 118 Query: 120 LD---SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W+ID+ G RR ++ L +A A+ ++ V ++ +Y+ R F+ R+ Sbjct: 119 ISGAAASWEIDVSGGLRRGAAAAADELQAAQAEQLGTRITVAAEAADTYLQIREFQARLL 178 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q++D + L ++ G ++ ++EA ++ S +P L + ++ + Sbjct: 179 VAQQLIDTDTHLLGLVRIRRRLGVATERETAQVEALLRQARSTVPPLRVALEAQLNRLDV 238 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+ A + + K S P + P D +R RPDI E++LA S +IG+A Sbjct: 239 LMAAQAGTYAEELSKPSAI--PRIPAIGGADQPLDALRRRPDIIAAERRLAASNERIGVA 296 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 SD YP +SL+G + N F G + L +FD GKI + + +A + Sbjct: 297 VSDYYPKISLSGVLGFDSINGGILFNGKAFQAAGTGALRWRLFDFGKINAEVAQARGAYA 356 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++ A +++ENAL + + + + +LQ V + LS Y+ G L Sbjct: 357 GALAEYRQAAFKATEDIENALMELAQTQLRLEELQGEVVSLTRVRDLSERAYKSGAIPLS 416 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D+LD + D+ + + A++ V + A+G G++ Sbjct: 417 DVLDADSQLLVARNDVESIRAEAARAAVSTFRALGGGWD 455 >gi|209519778|ref|ZP_03268564.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209499788|gb|EDZ99857.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 545 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 115/490 (23%), Positives = 216/490 (44%), Gaps = 68/490 (13%) Query: 18 CTVGPEYTKPHMPLLPTQF----------------SIGNSKNLINIDTLK---------- 51 C+V P Y +P + P F + G++ + N T K Sbjct: 30 CSVEPTYKRPDVDA-PAAFKEAPAAKTSASAASGVATGSAASAENTGTWKPAQPADDALR 88 Query: 52 --WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------S 100 WW+ F D L+ L + A N + A R+ A+ + ++D FP Sbjct: 89 GEWWKVFGDPQLDALEEQAAAANQDLKAAAARVQQARAVTQAAKSDWFPKFDAGFGPTRE 148 Query: 101 YASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 AS + +F+P+ +TG Q+ + ++ DLFG+ ++ ++ ++ + A +L Sbjct: 149 RASAASQFLPDSAGGTTGTIWRAQVGASYEADLFGRVSSNVNAARSDEQQSEALFRSVQL 208 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ + + +Y + + + + L + ++L +F +G S+L L + E+ S Sbjct: 209 SLQADVAQNYFELLELDTDQDLYRRTVALREDTLKLVERRFREGDISELDLSRSRNELAS 268 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPAD 270 +D + + + H+++ LLG P +F +F P+ G+P+ Sbjct: 269 ARADAVGVARQRAASEHSLAILLGKPPADF---------SFAEAPLAPVTARVPPGLPSA 319 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS----- 325 L+ RPDI E+ + + A++G+AKS +P L + G A +++ G WS Sbjct: 320 LLERRPDIAAAERAMQAANARVGLAKSAFFPKLDITG--AFGFESATLGDLFMWSSRAFI 377 Query: 326 ----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 G L +PIFD G+ K+N+ +A S E +++ VL A +EVE+ L + Sbjct: 378 LGPAVGTALTMPIFDGGRRKANLAQARSKYDEDVAQYRQQVLVAFREVEDNLADLRLLDD 437 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + + AV+ +++ LS Y +G S LD++D ER ++ S A + V+ Sbjct: 438 QMREQNDAVDASQRAAHLSRTQYTEGAVSYLDVIDGERQVLLSQLQASHLAGTQAVATVN 497 Query: 442 LYIAIGSGYN 451 L A+G G+ Sbjct: 498 LIRALGGGWG 507 >gi|320107490|ref|YP_004183080.1| NodT family RND efflux system outer membrane lipoprotein [Terriglobus saanensis SP1PR4] gi|319926011|gb|ADV83086.1| RND efflux system, outer membrane lipoprotein, NodT family [Terriglobus saanensis SP1PR4] Length = 479 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 125/466 (26%), Positives = 218/466 (46%), Gaps = 30/466 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI------NIDTLKWWESFNDTSLNK 63 L ++++AGC VGP Y P MP P G++ N D WW + D LN Sbjct: 13 LGLLVIAGCKVGPNYKAPAMPAPPAYSDNGHNGNWTEAEPADGADRGSWWAIYKDEKLNS 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYAS---ISHRFIPNLKTNS 116 L + N I A A + + +A L+P S +AS IS+ P L N+ Sbjct: 73 LEQQCATANQNIAAALHAYEQAHDLVRENKASLYPTVSLSGFASRNRISNTR-PLLPANA 131 Query: 117 TGQ-------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 L+ W+ DL+G+ RR IESS AN ++ A + +L++ L +Y+ R Sbjct: 132 QHDYWDFLIPLNISWEPDLWGRIRRQIESSAANAQASAANLASTRLSLQGMLAVTYLQIR 191 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +D + ++++L+ + T G S+ + + +A+++ + + L Sbjct: 192 GIDLQSQLLRSTIDAFSESLKLTQDRLTGGLASESDVEQAKAQLEEARAQLIDLGVQRAQ 251 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 I+ L+G PAT F H + P+ I G+P++L++ RPDI E+ ++ S Sbjct: 252 FEDAIAVLVGIPATGF-HIAELPLVGDPPS----IPTGLPSELLQRRPDIATSERLISSS 306 Query: 289 VAKIGIAKSDLYPS--LSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+AKS YPS L NG I + + F + WS GP + + D G+ ++ + Sbjct: 307 NALIGVAKSAYYPSVVLGANGGIESSQVSDVFNAGSALWSAGPSVNEVLIDGGRRRAQVD 366 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + ++ +++ VL+A ++VE+ L ++ T AV K+S LSM+ Y+ Sbjct: 367 FAIAQREQAAALYRQQVLSAFRDVEDQLAALRVLADEATVQDRAVAAAKRSTDLSMMRYK 426 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G L++L + E + + + L IA+G G++ Sbjct: 427 RGLAQYLEVLTNQTIELNDERAAAALTARRIVASAQLQIALGGGWD 472 >gi|241664115|ref|YP_002982475.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12D] gi|240866142|gb|ACS63803.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 484 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/444 (22%), Positives = 207/444 (46%), Gaps = 40/444 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDTL--KWWESF 56 +L C VGP++ P P LP Q S G ++ ++ + +WW++F Sbjct: 5 CLLTTACAVGPDFKTPEAPKVSGYTPQPLPQQTSTAATQGGEAQRFVSGMPVSDQWWKTF 64 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-----F 108 LNK + A+ + T+ A + A++ + + FP SY + Sbjct: 65 QSEKLNKTIANAIAASPTLAAAQAALRVAQQQTRAQQGAFFPMLQGSYQPSRQQNAVGTI 124 Query: 109 IPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P L + + T QL + D+FG RR +ES A D+ Y Q++ A L + S ++ Sbjct: 125 SPTLTSGAPIYTLHTAQLTVSYAPDVFGLNRRQVESLKATEDAQYFQMEAAYLTLASNIV 184 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + + + +I+ +I+D+ + ++ H +F GA + L + E + E +P Sbjct: 185 VAAVQEASLRAQIAAQQRIVDINTQLLDNLHKQFQLGAVTGLEVAAAETALAQAEQALPN 244 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIR 279 L+K + ++ L G +E + ++ F + +P + + +P+DL+R RPD+R Sbjct: 245 LQKQLAVQRDLLAALAGKLPSEGI----PETFTF-ADFTLPKELPVSLPSDLVRQRPDVR 299 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFD 336 E++L + A++G+A +++ P L++ G+ T + F N WS + FD Sbjct: 300 AAEEQLHAATAQVGVAIANMLPQLTITGTKGGTAEIFSQMFRDGNVFWSLVGNVAQTFFD 359 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + + R A + + ++ TV+ A + V + L +++ D ++ + + +K+ Sbjct: 360 GGALLAKKRAAVAGVDQAEAQYRGTVVTAFQNVADTLHALDADADVLKASLKSEQAARKT 419 Query: 397 MSLSMINYRQGRYSLLDILDIERA 420 ++++ G+ +LL +L+ E+A Sbjct: 420 LNITDKQRAIGQVNLLAVLNAEQA 443 >gi|70729511|ref|YP_259249.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68343810|gb|AAY91416.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 476 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 103/451 (22%), Positives = 208/451 (46%), Gaps = 22/451 (4%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQNLT 74 GC++ P+Y +P P+ P Q+ G + + W+ F D L +L+ ALQ N Sbjct: 16 GGCSLAPDYQRPTAPVAP-QYPQGAAFAPAAGNPGADWQGLFQDPLLQQLIHSALQNNRD 74 Query: 75 ILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQLDSDW-------- 124 + A + A + RADLFP+ A +S + +P T S + S + Sbjct: 75 LRVAALNVAAYQAQYRIQRADLFPAVSAGVSGKRQRLPEQMTGSKALISSSYSANLGISA 134 Query: 125 -KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++D FG+ R + + +L S+ A+L++++ + +Y+ +E + + + L Sbjct: 135 YELDFFGRIRSLSQQALMTYLSSEEARRSAQLSLVANVATAYLSWCADQELLELTRKTLA 194 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++++ L+ + G S L + + + S + + ++ +++N++ L+G P Sbjct: 195 ADEQSLRLTARNGSAGKISALDVAQARTSVDSARASLARYQRQVAQDLNNLTLLVGAPLP 254 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + L + + G+P+DL++ RPDI E +L + A IG A++ +PS Sbjct: 255 DALP-----RRGLAEGMLAQVPAGLPSDLLQRRPDILQAEYQLQAANANIGAARAAFFPS 309 Query: 303 LSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +SL GS + F G W+F P++ LPIF+ G +++++ A ++ Sbjct: 310 VSLTANAGSASKELSGLFKGGAGAWTFQPQINLPIFNAGSLRASLDYARLQKDISVAQYE 369 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + A +EV + L + ++ ++ V+ + +L+ YR G S L LD +R Sbjct: 370 KAIQTAFQEVADGLAARQTFQQQLSAQHSLVQASQDYYNLAEHRYRIGVDSNLVFLDAQR 429 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L + + V+L+ A+G + Sbjct: 430 SLFSAQQGLINDRLAQLLAEVNLFRALGGAW 460 >gi|282890757|ref|ZP_06299277.1| hypothetical protein pah_c026o088 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499350|gb|EFB41649.1| hypothetical protein pah_c026o088 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 457 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 110/441 (24%), Positives = 204/441 (46%), Gaps = 33/441 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++ L GC VGP+Y + P P + + + N D WW+ F D LN L AL Sbjct: 1 MLFLPGCVVGPKYHRSCSPT-PDHWKYEEQEEIANPDVENWWDIFEDPILNSLELQALGN 59 Query: 72 NLTILQATERINAAKENILSVRADLFP---------SSYASISHRFIP-NLKTNSTGQ-- 119 N + A R+ AK ++DL+P S+ I +P NL T Sbjct: 60 NQNLFAALFRVFQAKALADIRKSDLYPQVNLDPDYNSTNGLIEVFGLPANLPTILRAHQM 119 Query: 120 -----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + +++DL+G+ + SSL L++ + L + S+L +Y R + Sbjct: 120 LYALPFNLKYELDLWGKLKSQYWSSLRQLEAQEMAFQSSVLILTSELASTYFQIRSLDAQ 179 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I + + + K+ +E++ ++ G S + + + E + ++ + + + +N + I Sbjct: 180 IDVLKDTIRVRKEEVEVNQERYDAGLVSYIDVSQAERQYQNANAQYYDVLRQRALNENMI 239 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAK 291 + L+G P + S + P +P I GIP++++ RPD+R E++ A A Sbjct: 240 ALLIGVPPLDV-------SIAYSPITEMPPRIPSGIPSEVLLKRPDVREAERRSAAEHAL 292 Query: 292 IGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A + +PS +L ++ + HD G + W+ + I+D G+ S +R Sbjct: 293 IGAAYASFFPSFTLTNTLGFSSPDLHD-FLSGKSRLWAIDVRGTENIYDGGRNISQLRLT 351 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +E +Q+ VL A +EVE+AL ++ + + L+ AV +++ LS Y +G Sbjct: 352 WGRFREADAHYQQQVLIAFEEVESALANLKLQGEEIHSLEKAVAASRETTQLSNDRYSEG 411 Query: 408 RYSLLDILDIERATAKVEVDL 428 + L+++D ERA +++ DL Sbjct: 412 VINYLEVVDSERAELELKRDL 432 >gi|315918720|ref|ZP_07914960.1| outer membrane protein oprM [Bacteroides sp. D2] gi|313692595|gb|EFS29430.1| outer membrane protein oprM [Bacteroides sp. D2] Length = 456 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 115/455 (25%), Positives = 213/455 (46%), Gaps = 24/455 (5%) Query: 10 LFIVLLAGCTVGPEYTKPH-MPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + + LL+ C + Y +P +P+ L + +++ + + L W E F DT L L++ Sbjct: 9 MCMALLSSCHIYRNYQRPEGLPVDSLFRETDSSRTEDSLILGDLPWQEMFRDTLLQNLIR 68 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP--NLKTNSTGQL--DS 122 L N + A R++ AK + + PS S KT T +L + Sbjct: 69 YGLANNTDMQTALLRVDQAKAQLKAACLSFLPSLTLSPQGTLTGTDGSKTVKTYELPVQA 128 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+IDLFG R+ + + A L A + +I+ + Y E++ I+ L Sbjct: 129 SWEIDLFGNLRNAKKGTQATLLQQKAYQQAVRSELIATIANDYYSLLMLDEQLEISRATL 188 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D++++ I KF G ++ ++ + A + +E+ L++ R + + TLLG + Sbjct: 189 DVWREQIRTMESKFKVGEETENAITQARANLYELEATHNDLQRQQREAENTLCTLLGTTS 248 Query: 242 TEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 +Q+ S Q P L INIG+P L+ RPD+ E LA++ A+S Sbjct: 249 ----RSIQRGSLEQQSFPEL---INIGVPLRLLSKRPDVVQAEMTLANAYYTTNQARSAF 301 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH---W--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP+L+L GS T NS T+ W S L PIF++GK+ SN+R ++ Q Sbjct: 302 YPNLTLTGSAGWT--NSLGQVVTNPGGWILSAVASLTQPIFNRGKLISNLRVSKDDEQIA 359 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++ +L+A +EV +AL + ++ + Q + ++++ S Y+ G + L++ Sbjct: 360 LLAYKQALLDAGQEVNDALYATEAAQRTLGSHQKQCKELERTVQTSEALYQTGNATYLEL 419 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++ +++ + +S ++LY A+G G Sbjct: 420 LTARQSLLNARLNVVSDRFTRCQSIINLYNALGGG 454 >gi|329999904|ref|ZP_08303568.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3] gi|328538155|gb|EGF64313.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3] Length = 461 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 225/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 12 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 131 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 191 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 250 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 251 RALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 302 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 303 AAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 363 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 422 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 423 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|221069409|ref|ZP_03545514.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220714432|gb|EED69800.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 477 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/450 (22%), Positives = 211/450 (46%), Gaps = 12/450 (2%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L +GC+ P +P P+ + + W + + D L +++++AL+ N Sbjct: 14 LLASGCSFIPTLERPAAPVAEHYLATDEQAGTTAAADIPWQQFYTDPRLQQVIQLALENN 73 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKI 126 + A I A+ RA FP + S P+ T G W+I Sbjct: 74 RDLRVAVLNIEKAQAQYQIQRAGQFPEFGVAGSASRQPSATTGRYANSYMVGLSMPSWEI 133 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D +G+ + + +LA + A++++I+ + ++++ + +E ++I+ + L + Sbjct: 134 DFWGRIGSLKQQALAQYLATEEGRKAAQISLIATVANTWLNLQADEELLAISRRTLGTRE 193 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP-ATEF 244 ++I+L+ L+ G S+L + ++ +S + + +V+ ++ ++G + Sbjct: 194 QSIKLTKLRLDSGVASELDYRQAQSLTESARATLAQQAGQRERDVNALTLIVGQTLPGDL 253 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L MQ + P L + G+P+DL+ RPDIR E+ + + A IG A++ +P+++ Sbjct: 254 LTSMQGKQLRDLPAL-ADVPSGLPSDLLLRRPDIRQAEQSMIAANASIGAARALFFPNIT 312 Query: 305 LNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L S + + ++ P LYLPIF+ G+ ++N++ AE+S + ++ + Sbjct: 313 LTASAGFASSDISDLLKSDSAAFTIAPSLYLPIFNAGRNRANLQVAETSQKIAVAQYEGS 372 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + +A +EV + L + K+ + +E + LS + Y G S LD+LD +R+ Sbjct: 373 IQSAFREVSDTLVNRRSLKEQLDAQSRQLEAEQVRYKLSDLRYTNGVASYLDLLDAQRSL 432 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +E + + ++ V+LY +G G+ Sbjct: 433 FALEQSVVQVRLAQLQNQVNLYKVLGGGWT 462 >gi|207728308|ref|YP_002256702.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] gi|206591554|emb|CAQ57166.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] Length = 476 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 114/468 (24%), Positives = 209/468 (44%), Gaps = 43/468 (9%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ L+ C++ P KP +P+ P F + + L W F D L +L+ AL Sbjct: 8 LVLALSACSLTPALIKPALPV-PAAFPTESGPETQAHAADLGWRTMFGDRRLQRLIGRAL 66 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI-------PNLKTNSTGQL 120 N + A + A + RA P + S S + P + + Q Sbjct: 67 ANNRDLRLAALNVEAVRAQYHIQRAARLPGIDATGSASRQRTAANDGVSPAVAAANQEQY 126 Query: 121 DSD-----WKIDLFGQRRHIESSLANLDSAYAQV-------DIAKLNVISKLIPSYIDAR 168 + ++IDLFG+ R + D+A+A+ +++++ + +Y R Sbjct: 127 GVNVGLNAFEIDLFGRVRSLS------DAAFARYLASDEGRRAVQISLVGAVADAYFAER 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E++ +A L ++++++L+ T S L + + E ++ S E+D+ ++ Sbjct: 181 LAQEQLQLAEHTLADWRQSLDLARRLKTAKQNSGLDIAQAEGQVASAEADLEARTRALAQ 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + L+G E L + S QP + + G+P++L+ RPDIR E+ L + Sbjct: 241 ARNALQRLVGAGLPENLP--EPLSLEAQP-VVTRLPAGLPSELLIRRPDIRQAEQNLVAA 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P LSL S+ F + WSF P++ P+F G++++ +R Sbjct: 298 NADIGAARAAFFPRLSLTASLGYASPAMGGLFDDGHRVWSFSPQITQPLFQGGRLRAELR 357 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE ++ T+ A +EV + L + + AV ++ + LS + YR Sbjct: 358 LAELRKSSAIAEYERTIQTAFREVADGLAGRATYGRQIEAQIRAVASAERRVELSNLRYR 417 Query: 406 QGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKS-YVDLYIAIGSG 449 G L++LD +R A+ + +DL RQ A S V LY A+G G Sbjct: 418 AGVEGRLELLDSQRQLYASQQALLDL----RQGAFSNAVALYKALGGG 461 >gi|300694210|ref|YP_003750183.1| outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum PSI07] gi|299076247|emb|CBJ35561.1| putative outer membrane chanel lipoprotein transmembrane [Ralstonia solanacearum PSI07] Length = 509 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 217/467 (46%), Gaps = 35/467 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIAL 69 + C VGP+Y +P + P Q+ + G K D + KWW F D LN L + Sbjct: 27 MTACAVGPDYKRPSADV-PQQYKETAGEWKVGTPSDAIARGKWWAIFGDPQLNALEEQVA 85 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQ--- 119 N IL A + A+ + S RA +P+ S S +++T STG Sbjct: 86 AANQNILVAEAQYREAQALVQSARAQFYPTLTGSASASRSRSVRTTVNADGSLSTGSPTL 145 Query: 120 -------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD+ W++DL+G+ RR +ES+ A+ ++ + A L+ + L Y R Sbjct: 146 TNAQSLTLDASWELDLWGRIRRTVESNQASAQASAGDLASALLSAQATLAQDYFQLRVTD 205 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ + + Y++ ++L+ ++ G + ++ + ++K ++ + E + H Sbjct: 206 TQKAVLQRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQAQALLLDTEVTRAQLEH 265 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 I+ L+G +EF + P IP+ I P+ ++ RPDI E+++A + Sbjct: 266 AIAVLIGKSPSEFSLAPTPAATAQELPPLPDIPLEI--PSTVLERRPDIAAAERRMAAAN 323 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A IG+AK+ +P+L+L S L+ + + P + WS GP L +FD G + + Sbjct: 324 ADIGVAKAAYFPTLTLGASAGLSANTLSRLATLP--SRIWSIGPTLAATLFDGGARAAAV 381 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A ++ T+++TVL A ++VE+ L ++ + AV+ +++ L + Y Sbjct: 382 DKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVKSAQEAAQLDLNRY 441 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G S L+++ + E L + + + V L A+G G++ Sbjct: 442 RAGTISFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKALGGGWH 488 >gi|218512254|ref|ZP_03509094.1| nodulation protein [Rhizobium etli 8C-3] Length = 148 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/150 (47%), Positives = 102/150 (68%), Gaps = 5/150 (3%) Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 GA S+L +V+ E ++S +S+IP L++SF + H+I+TL+G PA+ + +QK + QP Sbjct: 1 GAASRLDVVQAEGLVQSTKSEIPGLQQSFTESAHHIATLIGMPASSLMGELQKSAG--QP 58 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHD 314 I GIPADLIRNRPDIR E++LA +VA IG A++ LYPS+SL+GSI+ + Sbjct: 59 VFRGDIRAGIPADLIRNRPDIRKAERELAAAVADIGAAEAQLYPSISLSGSISPSWVKAS 118 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + G T WSFGP L LPIFD G +++N+ Sbjct: 119 GASGGSLTSWSFGPSLNLPIFDGGTLRANV 148 >gi|206560499|ref|YP_002231263.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198036540|emb|CAR52437.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 463 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 207/465 (44%), Gaps = 37/465 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIA 68 LLAGC++ P Y P +P+ P F G + D L WW + D +L++L + Sbjct: 6 ALLAGCSLAPTYRAPDVPV-PAAFRETGPWIDAAPADRLPRDGWWRVYGDAALDRLEPLV 64 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKTN 115 + N + A R + A A L P S+ + P++ + Sbjct: 65 ARANPDLAAAVARHDEAAALFDEAHAALLPTVGIGAETDRDRQSARRPLRGSGQPDVYES 124 Query: 116 STGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +T + +DL+G+ R+ + + + +A + +L++ + + +Y D Sbjct: 125 NTLAAGIGYDVDLWGKVRNTVAAGRDDAQAAADDLASVQLSLQAGVASTYFDLAGLDREA 184 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 Q +D Y++ +L+ + G S L + + + ++ ++ + ++ H I+ Sbjct: 185 DTLTQTIDTYRRAWQLTVSRHRGGLASGLDVARAQTQLALAQARASDIAARRALDEHAIA 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A+ F S P + PI G+ + L+ RPD+ E+++A + A+IG+ Sbjct: 245 ALVGASASTF----TLPSAAALPGV-PPIPTGLASTLLERRPDVAAAERRVAAANARIGV 299 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P LSL D P N WS GP+L + +FD G + +R A + Sbjct: 300 ARAAFFPDLSLGLDAGFQSDTFSPWLAAPNEIWSVGPRLAMTLFDGGLRAAGVRHARAQF 359 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 EQ ++ VL A +EVE+ L ++ + A+ ++S++L+M YR G S Sbjct: 360 AEQGARYRSVVLLAFREVEDDLALLHRLGDEADQDDAALVAARQSLALAMSRYRDGAVSY 419 Query: 412 LDILDIERATAKVEVDLSIA-----KRQLAKSYVDLYIAIGSGYN 451 LD++ + E+D IA R+L S V L A+G G+ Sbjct: 420 LDVVTAQ----TTELDTQIAALDVDARRLQAS-VGLVRALGGGWR 459 >gi|145219542|ref|YP_001130251.1| RND efflux system outer membrane lipoprotein [Prosthecochloris vibrioformis DSM 265] gi|145205706|gb|ABP36749.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeovibrioides DSM 265] Length = 475 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 111/471 (23%), Positives = 219/471 (46%), Gaps = 36/471 (7%) Query: 7 IFSLFIVLLAG-----CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + + ++LLAG CT+ Y +P + + P Q+ + + ++I T+ + E F+DT L Sbjct: 9 VVAACLLLLAGYALSSCTMNGSYRRPDIAM-PDQYRGSTAADTLSIATMPYREFFSDTRL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKEN----------ILSVRADLF---PSSYASISHRF 108 L+ A+ NL + A + I A+E+ LS+ AD PS S + Sbjct: 68 ITLIDSAVAGNLDLQVAIKNIAYARESSKVAKLGYLPTLSIGADASLSRPSDNGSSALTG 127 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + Q W+ D++G+ R +S+LA + +++ + SY Sbjct: 128 SDKSVEDYSAQGSLSWEADIWGKIRSRKKSALAAYLKTREVARAVQTRLVADVADSYYSL 187 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ I+ + L L + + L++ G + L++ + EA +I IP LE+ Sbjct: 188 LMLDAQLDISRKNLALADTTLRMIRLQYDAGQVTSLAVQQQEASRSAIALAIPELERLIA 247 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEK 283 + IS L G+ M + +P P++ G+PA L+ NRPD++ E Sbjct: 248 ARENAISILTGH--------MPSRVERGEPLFKTPVHDNLPAGLPASLLENRPDVKAAEL 299 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKGK 339 + ++ A G A + LYP+L+L L + ++T S FG + PIF +G+ Sbjct: 300 GMREAHANSGAALAALYPTLTLTAEGGLNALRASDWFSTPGSLFGVVQGAVLQPIFQQGR 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++S R+ + + + + +++ VL A EV +AL ++ + + +K++ Sbjct: 360 LRSEFRKTKIRSIQAELAFRQAVLLAAGEVSDALVQLSSLQNREVEASSRAATLRKAVDN 419 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + +R G + L+++ ++ A+ ++L+ +RQ + +LY A+G G+ Sbjct: 420 STLLFRSGMATYLEVIAVQNASLGAYLELAEIRRQHLSAMAELYRALGGGW 470 >gi|254523784|ref|ZP_05135839.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas sp. SKA14] gi|219721375|gb|EED39900.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas sp. SKA14] Length = 452 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 217/465 (46%), Gaps = 42/465 (9%) Query: 13 VLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLV 65 +LL GC++ P Y P MP G ++ +DT WW++F D L++L Sbjct: 3 LLLGGCSLAPTYQTPVLAMP--------GAYEHTEKVDTRSPLPQAWWQAFQDPVLDQLQ 54 Query: 66 KIALQQNLTILQATERINAAKE---NILSVRADLFPSSYASISHR----------FIPNL 112 + N ++ A +AA+ + S RA S + R P + Sbjct: 55 QQLSAANPSLALAVAHYDAARAAAGEVASARAPQVGFSTGPVRQRQSDDKPLRSATQPAI 114 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFK 171 +++ + +DL+G+ R+ ++ A + A+L++ +L Y+ R + Sbjct: 115 YDSNSATFSLSFDLDLWGRLRNAAAAGKARAEASGDDLAAARLSLSQQLAGLYLQLRGAE 174 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + +I H ++ Y++ + L+ +F S+L + + + ++ S ++D+ L+ + H Sbjct: 175 AQQAILHDSIEDYRQALALTEDRFRGEIASQLDVSRAQHQLASAQADLDALDGRHELLRH 234 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G PAT F+ ++ P L +P++ +P+ L++ RPDI E+++ + A Sbjct: 235 AIAELVGAPATGFVI-----ADAGLPALPSVPVD--LPSRLLQRRPDIAAAERRVFAANA 287 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG+A++ +P LSL+G + N +W+ GP LP+FD G+ K+ A Sbjct: 288 GIGVARAAWFPQLSLSGLLGGQTSGGSALLDAGNRYWALGPLAALPVFDGGRRKAAKAEA 347 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + ++ TVL AI++VE+ LT + + Q AV +++ ++ Y G Sbjct: 348 YAEFDAASAQYRATVLAAIRQVEDQLTLLRQLDAQRGHEQDAVTAARRAEQIANDRYTGG 407 Query: 408 RYSLLDILDIERATAKVEVDLS-IAKRQLAKSYVDLYIAIGSGYN 451 S LD++ + + ++ L I RQL S L A+G G++ Sbjct: 408 AVSYLDVVSAQTDARQAQLGLQDIQSRQLQASAA-LMAALGGGWS 451 >gi|91778715|ref|YP_553923.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91691375|gb|ABE34573.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 485 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 112/471 (23%), Positives = 212/471 (45%), Gaps = 32/471 (6%) Query: 5 RAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI---DTLK---WWESFN 57 RA+ + I LL+ C+ P Y +P + P ++ G + D WW FN Sbjct: 13 RALAATLIGALLSACSTLPPYQRPSAGI-PAHYA-GAAPGWAQAAPGDAAPRGPWWTIFN 70 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKT 114 D L++L N T+ +A ++ A+ + RA FP+ A ++ +R N+ Sbjct: 71 DPVLDQLEARIDVSNQTVRKAVAQVQQARSMVDYQRAGFFPTITAGVAQDRYRTSQNVAG 130 Query: 115 NS---------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 S + + + W+ DLFG+ R + + A+ ++ A ++ +L + + L Y Sbjct: 131 KSLAGKTVPDYSAGVAASWEPDLFGRVRDSVNGAQADAQASEADLEGVRLAMSADLAIDY 190 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + + Y ++L + GA ++ + ++++ + ++ Sbjct: 191 FSLRSLDTQKKLLDDSVSAYAAALKLLQQQLKNGAIDASAVAQATTQLEATRTQDTDIDV 250 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H I+TL+G PA+ F + + P P G+P+ L+ RPDI E++ Sbjct: 251 TRSQMQHAIATLIGEPASSFT--LPPNGSAVTPPAIPP---GLPSQLLERRPDIAAAERR 305 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIK 341 +A + A+IG+A + +P L L+ S L P + WS GP+L +FD GK K Sbjct: 306 VASANAQIGVAHAAFFPDLVLSASAGLESSFFAPWLSAPSLFWSLGPQLAGTLFDGGKRK 365 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ A + ++++VL A ++VE+ L++++ Q A S+ L+ Sbjct: 366 ASLHGATAQYDGAVADYRQSVLVAFQQVEDNLSALHSLADEAVSQQRATTAADLSLRLTT 425 Query: 402 INYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S LD++ + A + + IA RQL +S V L A+G + Sbjct: 426 NRFNAGAVSYLDVVTAQTIALSNQRIADQIAARQL-ESSVLLLEALGGTWG 475 >gi|254184710|ref|ZP_04891299.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|184215302|gb|EDU12283.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] Length = 508 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 70 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 129 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 130 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 186 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 246 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 247 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDLAP----GLPSE 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 302 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 362 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQAAFRDVADALAARHWLADQVRIAQ 421 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 422 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 481 Query: 448 S 448 Sbjct: 482 G 482 >gi|38639717|ref|NP_943486.1| copper/silver efflux system outer membrane protein CusC [Klebsiella pneumoniae] gi|38016815|gb|AAR07836.1| SilC [Klebsiella pneumoniae] Length = 513 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 225/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 64 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 122 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 123 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 182 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 183 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIARET 242 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 243 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 302 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 303 RALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 354 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 355 AAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 414 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 415 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 474 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 475 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 511 >gi|148265519|ref|YP_001232225.1| RND efflux system outer membrane lipoprotein [Geobacter uraniireducens Rf4] gi|146399019|gb|ABQ27652.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter uraniireducens Rf4] Length = 470 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 211/468 (45%), Gaps = 30/468 (6%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDT 59 I ++ LAGC T+ P+YT+P P+ P + + + + W E F D Sbjct: 7 IVAVLAGALAGCATMAPKYTRPEPPVPAAWPSGPAYKDVAGKPADMAVADIPWAEFFLDP 66 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNS 116 L K+V ++L N + A I ++ R+DLFP +S A R +L + Sbjct: 67 QLRKVVALSLDNNRDLRVAALNIERSRAQYQIQRSDLFPKVDASAAGSVQRVPADLSGSG 126 Query: 117 TGQLD---------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYI 165 + S +++DLFG+ R ++ L + A+ + ++++++++ +++ Sbjct: 127 QAMIRHQYNVGLGVSSYELDLFGRVRSLKDQALEQYLATEQARRSV-QISLVAEVAGNWL 185 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +ER+ +A + L + + +L + G +S L L + + + + DI Sbjct: 186 ALAADRERLQLAKETLVSQQASYQLVKSRVEAGVSSALDLHQAQTSVDTARVDIARYTTF 245 Query: 226 FRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ ++G P E L ++ + + G+P+D++ RPDI E Sbjct: 246 VAQDENALNLVVGSPVPAELLPAALSETLTALKD----VAPGLPSDVLLRRPDILQAEGF 301 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +P ++L S+ + D F G WSF P++ LPIFD G + Sbjct: 302 LKGANANIGAARAAFFPRITLTSSVGVGSDGLSGLFKGGAFAWSFAPQITLPIFDAGSRQ 361 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N++ AE +++++ A +EV +AL + Q + +S +LS Sbjct: 362 ANLKVAEVDRDIAVAQYEKSIQTAFREVADALAQRGTIDDQLAAQQSLTDATGESYNLSQ 421 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G S L++LD +R+ + ++ + + LY +G G Sbjct: 422 ARYEKGVDSYLNVLDSQRSLYGAQQNMISVRLARLNNLATLYKVLGGG 469 >gi|56476345|ref|YP_157934.1| outer membrane channel protein [Aromatoleum aromaticum EbN1] gi|56312388|emb|CAI07033.1| outer membrane channel protein [Aromatoleum aromaticum EbN1] Length = 477 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 111/446 (24%), Positives = 204/446 (45%), Gaps = 21/446 (4%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQN 72 AG V EY +P P + + + DT+ WW F D +L++LV A+ N Sbjct: 33 CAGVKVA-EYQRPDTPGKASW----SRPAVSAADTIAPDWWREFGDPTLDELVNRAIADN 87 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD----SDWKIDL 128 + RI A+ I RA P+ F + N Q + +W +D+ Sbjct: 88 FDVKILAARIQVAEAQIGEARAGALPTLDIGAGASFEKSTGQNFRKQFNLGTQVNWDLDI 147 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 +G+ + +++ A + A L ++S + +Y E+I + LD ++ Sbjct: 148 WGKVEKGVQAQTAEFRATEADWRAGYLTLVSDVATTYFQILQLDEQIDRQQRALDRSRQI 207 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + QG + +++ AE ++ D+ L+++ + + ++TLLG PA EF Sbjct: 208 LATFEAMLGQGLVPRTQVLRQRAENNALTRDLLELQRARGLAGNALATLLGVPAGEFTVP 267 Query: 248 MQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 K Q + +P + G+P++L+ RPDI E +L ++ +G A+ PS+SL Sbjct: 268 PGK----LQERVELPAVPAGLPSELLNRRPDIVAAEFRLLEAYDLVGQARLAQLPSISLT 323 Query: 307 GSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 G T + ++FG P + +P FD IK+ ++ E+ + +Q TV+ Sbjct: 324 GRGG-TSSFALGDLLKSFTFGFLPSINIPAFDP-SIKARLKTTEAQTKVFEHEYQRTVIA 381 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A +EVENALT++ ++ T+LQ ++ + + R+G S L++ + ER+ Sbjct: 382 AFEEVENALTNLEAHRQQRTELQQQIDQLQIVAAQVEAQLREGLVSQLEVFETERSLLAA 441 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L +Q+ V LY A+G G+ Sbjct: 442 QLALLANHQQILADTVTLYKALGGGW 467 >gi|300696876|ref|YP_003747537.1| type I secretion outer membrane outer membrane drug efflux lipoprotein (mtrE) [Ralstonia solanacearum CFBP2957] gi|299073600|emb|CBJ53120.1| Type I secretion outer membrane outer membrane drug efflux lipoprotein (mtrE) [Ralstonia solanacearum CFBP2957] Length = 476 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/470 (24%), Positives = 212/470 (45%), Gaps = 47/470 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ L+ C++ P KP +P+ P F + + L W F D L +L++ AL Sbjct: 8 LVLALSACSLTPALIKPALPV-PEAFPTESGPETQAHAADLGWRTMFGDRRLQRLIERAL 66 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI-------PNLKTNSTGQL 120 N + A + A + RA P + S S + P + + Q Sbjct: 67 ANNRDLRLAVLNVEAVRAQYNIQRAARLPGIDATGSASRQRTAANDGVSPAVAAANQEQY 126 Query: 121 DSD-----WKIDLFGQRRHIESSLANLDSAYAQV-------DIAKLNVISKLIPSYIDAR 168 + ++IDLFG+ R + D+A+A+ A+++++ + +Y R Sbjct: 127 GVNVGLNAFEIDLFGRVRSLS------DAAFARYLASDEGRRAAQISLVGAVADAYFAER 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E++ +A L ++++++L+ T S L + + E ++ S E+D+ ++ Sbjct: 181 LAQEQLQLAEHTLADWRQSLDLARRLKTAKQNSGLDIAQAEGQVASAEADLEARTRALAQ 240 Query: 229 NVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G PA + + S QP + + G+P++L+ RPDIR E+ L Sbjct: 241 ARNALQRLVGSGLPA----NLPEPLSLEAQP-VVTRLPAGLPSELLIRRPDIRQAEQNLL 295 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P LSL S+ F + WSF P++ P+F G++++ Sbjct: 296 AANADIGAARAAFFPRLSLTASLGYASPAMGGLFDDGHRVWSFSPQITQPLFQGGRLRAE 355 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +R AE ++ T+ A +EV + L + + AV ++ + LS + Sbjct: 356 LRLAELRKSSAIAEYERTIQTAFREVADGLAGRATYGRQIDAQIRAVASAERRVELSTLR 415 Query: 404 YRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKS-YVDLYIAIGSG 449 YR G L++LD +R A+ + +DL RQ A S V LY A+G G Sbjct: 416 YRAGVEGRLELLDSQRQLYASQQALLDL----RQGAFSNAVALYKALGGG 461 >gi|237507399|ref|ZP_04520114.1| outer membrane efflux protein OprC [Burkholderia pseudomallei MSHR346] gi|234999604|gb|EEP49028.1| outer membrane efflux protein OprC [Burkholderia pseudomallei MSHR346] Length = 510 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 116/470 (24%), Positives = 210/470 (44%), Gaps = 47/470 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW F D L+ L Sbjct: 32 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRVFGDPVLDALETQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 272 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + + + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 383 AGVAQERAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 442 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 443 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 492 >gi|83745943|ref|ZP_00942999.1| OprM [Ralstonia solanacearum UW551] gi|207742039|ref|YP_002258431.1| outer membrane channel lipoprotein [Ralstonia solanacearum IPO1609] gi|83727337|gb|EAP74459.1| OprM [Ralstonia solanacearum UW551] gi|206593425|emb|CAQ60352.1| outer membrane channel lipoprotein [Ralstonia solanacearum IPO1609] Length = 478 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/437 (21%), Positives = 197/437 (45%), Gaps = 38/437 (8%) Query: 16 AGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDT-LKWWESFNDTSL 61 GC VGP++ P P LP + G ++ L + WW F ++L Sbjct: 16 GGCAVGPDFKAPAPPAASGYTAQPLPAATASAPVPGGEAQRLAEANVPADWWHLFQSSAL 75 Query: 62 NKLVKIALQQNLTIL-----------QATERINAA----KENILSVRADLFPSSYASISH 106 + LV AL+ + T+ +A + A + +VR + P ++ + Sbjct: 76 DALVDEALRASPTVAQAAARLRQAQAEAEAQFGAVLPSVDGTVSAVRQQVNPEAFGFSTP 135 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + P T + L + +DLFG RR +E+S A +D+ +++ A+L++ ++ + + Sbjct: 136 K--PGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDTQRYELEAARLSLAGNVVTAVV 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +I+ ++L + + ++ +F G +++ ++ ++ E+ +P L + Sbjct: 194 RVASLDAQIATTQRLLAAQRDQLAITERRFGAGGVARVEVLSQRTQLAQTEATLPPLAQQ 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 254 AAQARHRLSVLLGREPGAGLPDLPSLDALRLPD---PLPVSLPSTLAQRRPDIRAAEAMW 310 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 ++ A +G+A ++L+P ++L+ GS N ++ W+ G L P+F G +++ Sbjct: 311 HEASANVGVATANLFPRITLSAGLGSETTGFRNLLGAGSSIWNLGGSLTQPLFHGGTLRA 370 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R AE++ +++ VL ++EV +AL +++ D + + A + +++ Sbjct: 371 RKREAEAAYDAAGAAYRQAVLQGLQEVADALHAVHNDARALQARALATDQAAQALRAEQA 430 Query: 403 NYRQGRYSLLDILDIER 419 Y G S L +LD +R Sbjct: 431 RYAAGGISTLALLDAQR 447 >gi|260170361|ref|ZP_05756773.1| outer membrane protein oprM precursor [Bacteroides sp. D2] Length = 448 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/455 (25%), Positives = 213/455 (46%), Gaps = 24/455 (5%) Query: 10 LFIVLLAGCTVGPEYTKPH-MPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + + LL+ C + Y +P +P+ L + +++ + + L W E F DT L L++ Sbjct: 1 MCMALLSSCHIYRNYQRPEGLPVDSLFRETDSSRTEDSLILGDLPWQEMFRDTLLQNLIR 60 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP--NLKTNSTGQL--DS 122 L N + A R++ AK + + PS S KT T +L + Sbjct: 61 YGLANNTDMQTALLRVDQAKAQLKAACLSFLPSLTLSPQGTLTGTDGSKTVKTYELPVQA 120 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+IDLFG R+ + + A L A + +I+ + Y E++ I+ L Sbjct: 121 SWEIDLFGNLRNAKKGTQATLLQQKAYQQAVRSELIATIANDYYSLLMLDEQLEISRATL 180 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D++++ I KF G ++ ++ + A + +E+ L++ R + + TLLG + Sbjct: 181 DVWREQIRTMESKFKVGEETENAITQARANLYELEATHNDLQRQQREAENTLCTLLGTTS 240 Query: 242 TEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 +Q+ S Q P L INIG+P L+ RPD+ E LA++ A+S Sbjct: 241 ----RSIQRGSLEQQSFPEL---INIGVPLRLLSKRPDVVQAEMTLANAYYTTNQARSAF 293 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH---W--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP+L+L GS T NS T+ W S L PIF++GK+ SN+R ++ Q Sbjct: 294 YPNLTLTGSAGWT--NSLGQVVTNPGGWILSAVASLTQPIFNRGKLISNLRVSKDDEQIA 351 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++ +L+A +EV +AL + ++ + Q + ++++ S Y+ G + L++ Sbjct: 352 LLAYKQALLDAGQEVNDALYATEAAQRTLGSHQKQCKELERTVQTSEALYQTGNATYLEL 411 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++ +++ + +S ++LY A+G G Sbjct: 412 LTARQSLLNARLNVVSDRFTRCQSIINLYNALGGG 446 >gi|300311703|ref|YP_003775795.1| ABC-type export system outer membrane channel protein [Herbaspirillum seropedicae SmR1] gi|300074488|gb|ADJ63887.1| ABC-type export system, outer membrane channel protein [Herbaspirillum seropedicae SmR1] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 119/481 (24%), Positives = 210/481 (43%), Gaps = 55/481 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMP----------LLPTQFSIGNSKNLINIDT--LKWWESFN 57 + + AGC VGP++ P P LL S+ L+ + +WW+ F Sbjct: 16 MLLATQAGCLVGPDFVAPTPPRVSQYTRDPVLLDRMSEPDMSQQLLMGENPPARWWQLFG 75 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHR 107 L+ V AL +N T+ A + A++N+ + A +P + AS+ Sbjct: 76 SPELDAAVTQALTRNPTLQAAVSNLLLAEDNLRAGGAVFYPRLDANMMAERTRSASLVQG 135 Query: 108 FIPNLKTNSTGQLDS--DWKIDLFGQRRHIESSLANLDSAYAQVDI-------AKLNVIS 158 K S L + IDLFG++R L+ A VD+ A L + + Sbjct: 136 SSAPDKVFSVATLSGAVSYAIDLFGEKRR------TLEQLEAMVDVQQQLHHAAYLTLTA 189 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +YI + +IS+ QI+ L + +E + G L+ + + ++ Sbjct: 190 NVVNAYIARAGYLSQISLVRQIIALEELQLEAIQARVDTGVAPLADLLSQASLLAGNQAL 249 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 + L + H ++ L G +PA L + +L++P I + +P+ L+R R Sbjct: 250 LAQLTQRLYQIEHLLAQLQGEFPAQASLPEL------VLADLHLPSDIPVSLPSALVRRR 303 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTH-WSFGPKLYL 332 PDI E ++ + A IG++ + YPSL L + + N G T WSFGP L Sbjct: 304 PDILAAEARMHAASAAIGMSSAAQYPSLELTATYGVAARNLSQLTGPATSLWSFGPSLST 363 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F+ G++++ A ++ + +Q+TVL A ++V +AL ++ D IV+ A Sbjct: 364 PLFNGGRLRAQRDAAVNAFEASQSEYQQTVLTAFEQVADALRALQADGHIVSAQSAAARY 423 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ L +Y G S D+L E R+ A + ++ + Q V L +A G G Sbjct: 424 AYDTLLLQRASYSAGLSSYADMLLYEVQYRSAAIASLQATVQRYQ---DTVALLVASGGG 480 Query: 450 Y 450 + Sbjct: 481 W 481 >gi|126443184|ref|YP_001063766.1| Outer membrane protein [Burkholderia pseudomallei 668] gi|126222675|gb|ABN86180.1| outer membrane protein [Burkholderia pseudomallei 668] Length = 508 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 70 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 129 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 130 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 186 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 246 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 247 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 302 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 362 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQAAFRDVADALAARHWLADQVRIAQ 421 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 422 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 481 Query: 448 S 448 Sbjct: 482 G 482 >gi|167724868|ref|ZP_02408104.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei DM98] Length = 464 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ L W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 26 TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 85 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 86 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 142 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 143 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 202 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 203 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 257 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 258 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 317 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 318 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQAAFRDVADALAARHWLADQVRIAQ 377 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 378 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 437 Query: 448 S 448 Sbjct: 438 G 438 >gi|152973507|ref|YP_001338558.1| copper/silver efflux system outer membrane protein CusC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150958299|gb|ABR80328.1| putative outer membrane protein SilC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 513 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 225/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 64 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 122 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 123 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDKPTTQEYDAGLE 182 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 183 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 242 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 243 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 302 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 303 RALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 354 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 355 AAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 414 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 415 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 474 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 475 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 511 >gi|283834148|ref|ZP_06353889.1| cation efflux system protein CusC [Citrobacter youngae ATCC 29220] gi|291070298|gb|EFE08407.1| cation efflux system protein CusC [Citrobacter youngae ATCC 29220] Length = 460 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 113/462 (24%), Positives = 222/462 (48%), Gaps = 38/462 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL---INIDTLKWWESFNDTSLNKLVKIA 68 + +LAGC++ P+Y +P +P+ P QFS+ + + + W F D + L+ A Sbjct: 12 VFVLAGCSLAPDYQRPALPV-PQQFSLSQNALVSAPVGYQDTGWRTFFVDPQVKALIGEA 70 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDS 122 L N + A ++ A+ AD +P A S + LK +S+ L+ Sbjct: 71 LANNRDLRMAVLKVQEARAQYGVTDADRYPQITAGSSGTYSGKLKGDSSTDREFEAGLNL 130 Query: 123 DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 + +D FG+ +++ E+ N ++ +++IS + SY + R ++ IA + L Sbjct: 131 SFDLDFFGRLKNMSEADRQNFFASEEARRAVHISLISNVSQSYFNQRLAYAQLQIAEETL 190 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y+++ + G+T+ L+L + I+S S+I + + + LLG Sbjct: 191 QNYQRSYAFVEKQLVTGSTNVLALEQARGVIESTRSEIAKRKGELAQANNALQLLLGTYG 250 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + + +P P +P+ ++ RPDI E L + A IG A++ +P Sbjct: 251 -KLPDDRARSDGDIKPVTLPP---SLPSQILLQRPDILEAEHGLMAANANIGAARAAFFP 306 Query: 302 SLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S++L S + + N F + W+F PK+ +PIF+ G+ +SN+ AE Q+ + + Sbjct: 307 SITLTSSASSSSSDLSNLFNAASGMWNFVPKIDIPIFNAGRNQSNLDLAEIRQQQSVVNY 366 Query: 359 QETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ + +A KEV +AL I+ ++ +T LQ ++ ++ +L Y+ G S Sbjct: 367 EQKIQSAFKEVADALDLRQSIADQISGQQRYLTSLQITLQ---RARAL----YQNGAVSY 419 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ +++ + + L+ A+G G+ Sbjct: 420 IEVLDAERSLFATQQSLLDLNYSQQ---VNEIKLFAALGGGW 458 >gi|238025704|ref|YP_002909935.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily protein [Burkholderia glumae BGR1] gi|237874898|gb|ACR27231.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily protein [Burkholderia glumae BGR1] Length = 507 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 118/477 (24%), Positives = 229/477 (48%), Gaps = 46/477 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDT 59 A+ + +L+AGC VGP+Y +P + + P + + + + D +WW+ ++D Sbjct: 16 AVSAAVAMLVAGCAVGPDYHRPDVAVPAAYKEAPPGWKVAQPDD--HADRGQWWKIYHDA 73 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN-- 115 L++L+ N T+ Q+ A+ + RA FP+ + AS + P + + Sbjct: 74 QLDELIAKLNASNQTVAQSAAAYRQARALVAQARAAYFPTLGATASDTRSSSPGVANSRF 133 Query: 116 STGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 STG+ LD+ W+ DL+G+ R++ S A+ +A A + A+L+ S L +Y Sbjct: 134 STGRSSTTSYSAGLDASWEPDLWGKVSRNVSSQRASEQAAAADLANARLSAQSTLAQTYF 193 Query: 166 DARHFKERISIAHQILD----LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 R A Q+LD +++ ++L+ ++ QG ++ +++ + +++S ++ Sbjct: 194 QLRAADS----AQQLLDDTVASFRRALQLTQNQYAQGVAARSDVIQAQTQLQSAQASAID 249 Query: 222 LEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + H I+TL+G PA+ F L M + +P L+ RPD+ Sbjct: 250 NGIARAQYEHAIATLIGVPASSFSLPPMPLAAEPPATPAAVPSA------LLERRPDVAA 303 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIF 335 E++ A + +IG+A + +P+L+L+ S A + S P + W+ GP+L +F Sbjct: 304 AERRAAAANEQIGVAIAAFFPTLTLSATGGVQSSAWSQLFSLP--SRVWTVGPQLAATLF 361 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHK 394 D G + A +S + ++ TVL+A ++VE+ L S+ D+++V + Q AV+ + Sbjct: 362 DAGLRAAQTDAARASYDQNVAAYRGTVLSAFQDVEDNLASLRILDQEVVVQRQ-AVDSAQ 420 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + Y+ G + L +L + E L Q S V L A+G G++ Sbjct: 421 RALDIVTNQYKSGTVAYLSVLTAQTTAFTAEQKLVQIDGQRMVSSVGLVKALGGGWD 477 >gi|161522912|ref|YP_001585841.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346465|gb|ABX19549.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] Length = 496 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/476 (23%), Positives = 218/476 (45%), Gaps = 46/476 (9%) Query: 13 VLLAGCTVGPEYTKPHMP----LLP--------TQFSIGNSKNLINID---TLKWWESFN 57 VLLAGCTVGP + P P +P +S ++ D T WW F Sbjct: 27 VLLAGCTVGPNFVPPPAPRVARFVPPDDPGAASGSWSGDGRTQALSTDAALTRDWWTRFG 86 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN 115 +++ V AL + T+ A + ++ + + + FP + AS S + L+T Sbjct: 87 SRAIDSTVAEALTGSPTLDLAEATLRRSEHALRAGQGIFFPQVDAQASASRQRAWPLRTG 146 Query: 116 S----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T + +DL+G ++R +E+ A++D+ + A L + + ++ + Sbjct: 147 QALPASIFNLFTLSATVSYTLDLWGGEQRQVEALAADVDAQRQALAGAYLMLTANVVNTM 206 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +++ + +++ L + I L+ + T GA + ++++ LE++ S+E+ +P L++ Sbjct: 207 VARAAYRDEAAATREMIGLLDEQIRLTGAQVTAGAAAYVAVLTLESQRASLEAALPALDQ 266 Query: 225 SFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRY 280 R ++ LL YP + + + +P ++ P+ L+R RPDI Sbjct: 267 K-RAQADDLLALLAGRYPVD------WRTPDLSLDGIELPASLPDTAPSSLVRRRPDILQ 319 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E +L + A++G+A + LYP+L+L+ S + F WS G L PIF Sbjct: 320 AEAQLHVASAQVGVATAALYPNLTLSASGGFDSVVASKLFAPAGRAWSVGAGLTAPIFHG 379 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + + R A+ + E +++ VL+A +V + L ++ D + A+ + ++ Sbjct: 380 GTLLNRRRAAQDAYDEADAAYRQVVLSAFSQVADTLRALANDAMALDAQARAMAAARDAL 439 Query: 398 SLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G Y L + D++ A++ ++A+R + V Y+A+G G+ Sbjct: 440 KLTQAGYDAGIAGYVQLLVADLQYHQARIAWLQTVAQRL--QDTVAFYVALGGGWG 493 >gi|237728471|ref|ZP_04558952.1| copper/silver efflux system outer membrane protein CusC [Citrobacter sp. 30_2] gi|226909949|gb|EEH95867.1| copper/silver efflux system outer membrane protein CusC [Citrobacter sp. 30_2] Length = 562 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 225/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 113 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 171 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 172 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDKPTTQEYDAGLE 231 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 232 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 291 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 292 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 351 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 352 RAVPSEKGIKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 403 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 404 AAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 463 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 464 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYSSGAVSYIE 523 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 524 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 560 >gi|256425061|ref|YP_003125714.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256039969|gb|ACU63513.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 468 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/463 (22%), Positives = 221/463 (47%), Gaps = 32/463 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 I ++A C VG E+ +P + + P QF S + NI L D +L +L+ A+ + Sbjct: 13 IAVIASCKVGKEFARPSVDM-PAQFRGEASADTNNIAVLPVSSFIKDAALLRLIDSAVAK 71 Query: 72 NLTILQATERINAAKENILSVRADLFP----------------SSYASISHRFIPNLKTN 115 N + A + I +A ++ S R+ P S S+S +FI + Sbjct: 72 NFDVQVALKNIESAGASLKSARSGRLPDLNLSVQGTRNWPSKNSLNGSLSEQFIGTRYMD 131 Query: 116 S-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L+ W++ +G+ R E++LA + + VIS + +Y + + Sbjct: 132 DYNAGLNLSWEVVAWGKISRLKEAALATYLQSTEASKAVRTRVISDVAQAYYNLLMLDTQ 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +A++ + L + + L+++ G + L++ ++EA+++ + IP +E+ + + + Sbjct: 192 KEVAYRNMQLTDSTLRIVRLQYSSGMATNLAVEQIEAQLRVSLALIPQIEQQIAIQENAL 251 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 TL G P + +Q + + + G+PA L+ RPD+R E + + A+ Sbjct: 252 KTLTGEMPGGIVRNRLQDLTAD------TTLAAGVPASLLSRRPDVRAAEMAVKVANARA 305 Query: 293 GIAKSDLYPSLSLNGSIALTH---DN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G+A++ +YP+L++ + + DN + PG + + G + P+F + ++++ A Sbjct: 306 GVAEAAMYPALNITAGVGVNSFKIDNWLNIPG-SLFETVGGSITQPVFRRRQLRTEWETA 364 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + ++ I ++ +V A++EV +AL +++ K+ Q V+ + + + + ++ G Sbjct: 365 KIDWEKSVIEFRRSVTTAVQEVSDALAKMDKLKEQYIFTQQRVDRLEIATHDASLLFQNG 424 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+++ + + E+DL+ KR + VDLY A+G G+ Sbjct: 425 MANYLEVITAQSNALQSELDLAAVKRDQLNATVDLYRALGGGW 467 >gi|289664656|ref|ZP_06486237.1| outer membrane protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 501 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 112/483 (23%), Positives = 217/483 (44%), Gaps = 34/483 (7%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFS---IGNSKNLINIDT------ 49 M+ +R F V +L+GCT+ P Y +P P+ P QF+ + + + DT Sbjct: 1 MSSIRMTFCALGVASVLSGCTLMPRYARPDAPV-PAQFAGTDVSTAPSTATADTDSTADT 59 Query: 50 -----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----- 99 + W + F D +L +++ +AL N + A I A+ RA L P+ Sbjct: 60 AYIADIGWRQVFTDPALQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIDGTG 119 Query: 100 ---SYASISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDI 151 + + + IP +T S S +++DLFG+ R + E +L S Sbjct: 120 TANNSRTPAELGIPGQPQVFRTYSASIGISAYELDLFGRVRSLKEQALQQFLSTAEARRS 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 +++++++ +Y+ ++ + +A L + L F G S+L+L + + Sbjct: 180 THISLVAEVATAYLTLAADQQLLQLAQSTLASQSDSYRLQQRSFELGVASQLTLRQAQTT 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 +++ D+ + + + L+G E L + + + + N+ + G+P+ Sbjct: 240 VETARVDVERYTAQVAQDRNALVLLVGASVPVELLPHALPDNASVEGNVLASVPAGLPSQ 299 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L++ RPDI E+ L + A IG A++ +PS+SL S + + F WSF Sbjct: 300 LLQRRPDILEAERNLRAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWSFV 359 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L LPIF+ G+ ++N+ A+++ + +++++ +A +EV +AL + + + Q Sbjct: 360 PTLTLPIFNAGRNRANLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQAQQ 419 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 V+ S LS + +G S L LD +R+ + L + + V Y A+G Sbjct: 420 ALVDATADSYRLSQARFERGIDSYLQALDAQRSLYSAQQTLITTQLSRFTNLVTFYKAMG 479 Query: 448 SGY 450 G+ Sbjct: 480 GGW 482 >gi|300774149|ref|ZP_07084017.1| outer membrane efflux lipoprotein IbeB [Sphingobacterium spiritivorum ATCC 33861] gi|300758960|gb|EFK55788.1| outer membrane efflux lipoprotein IbeB [Sphingobacterium spiritivorum ATCC 33861] Length = 485 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 113/479 (23%), Positives = 228/479 (47%), Gaps = 51/479 (10%) Query: 11 FIVLLAGC-----TVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKL 64 F ++LAGC T+ + K ++PL F S G + N T W + F D +L L Sbjct: 18 FALMLAGCKAPKATIVKDEVKENIPL---NFQSDGQQDTVQNSGTTPWRQFFTDPNLVAL 74 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------SHRF---------- 108 ++ AL+ N +L + I AK +L L P+ A + + R+ Sbjct: 75 IETALKNNQELLITLQEIEIAKNGVLYKNGKLSPTVAAKLGAGVSKAGRYTSEGAGDATT 134 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 +P+ N G L ++W++D++ + R ++++A+ + + N+I ++ Sbjct: 135 EIEPGKEMPDPLGNFEGALVANWEVDIWKKLRTEKQAAIAHYLATVEGKNFVLSNLIEEV 194 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + ++ I Q + L ++ +E+S ++ AT++L++ K EAE+ ++ Sbjct: 195 ADNYYELLALDNQLDIVQQYIKLQERALEISKIQKEAAATTELAVKKFEAELSKSKATAY 254 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 T+ + + I+ LLG YP + + +F + P+ GIP+ L+ NRPDI+ Sbjct: 255 TIHQEITEKENQINALLGRYP-----QPVVRTKESFMSTIAQPVYTGIPSQLLANRPDIK 309 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY------NTHWSFGPKLYL 332 E +L + + A+ + YPSL ++ ++ L +F P Y + + +L Sbjct: 310 EAELELKAAKLDVEAARKEFYPSLEISAALGL---EAFKPSYLVKMPESIAFGLAGELAG 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIVTKLQHAVE 391 P+ +K IK+N + A++ + + +T+LNA ++ N ++ + N D+ K Q Sbjct: 367 PLINKSAIKANFQTADARQLQALYEYDKTILNAYLDIANLMSKVKNIDQYYKMKSQETQA 426 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L + S+ ++ ++ R L++L +R +++L AK++ + VD+Y +G G+ Sbjct: 427 LDE-SIEIANQLFKNSRADYLEVLLNQRDALDAKLELIEAKQKQLSTVVDIYKGLGGGW 484 >gi|168998688|ref|YP_001687956.1| copper/silver efflux system outer membrane protein CusC [Klebsiella pneumoniae NTUH-K2044] gi|238549703|dbj|BAH66054.1| outer membrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 461 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 225/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 12 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 131 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 191 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 250 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 251 RALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 302 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 303 AAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 363 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 422 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 423 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|194336221|ref|YP_002018015.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelodictyon phaeoclathratiforme BU-1] gi|194308698|gb|ACF43398.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelodictyon phaeoclathratiforme BU-1] Length = 473 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 225/474 (47%), Gaps = 38/474 (8%) Query: 6 AIFSLFIVLL----AGCTVGPEYTKPHMPLLPTQF-----SIGNSKNLINIDTLKWWESF 56 ++ L +VL+ A C+ EY KP + L P + + N+ +LI++ L + F Sbjct: 8 GVWVLLLVLMGSAMAACSSVGEYKKPEVAL-PAAYRGVASGVSNADSLISL--LPYRSFF 64 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------P 110 D +L L+ A+ N+ + A + I+ A++++ S R + P+ + P Sbjct: 65 ADEALRTLIDSAIVNNIDLQVALKNIDYARQSLNSARLGMLPTLNIGVDGSLSRPSDNGP 124 Query: 111 NLKT-------NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 K N T + W+ D++G+ R +S+LA+ + +++ + Sbjct: 125 QAKAEPDKTTENYTASASASWEADIWGKIRSRKKSALASYLKTGEAARAVRTRLVADVAD 184 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + +++++ + L L +++ L++ G + L++ + EA +SI IP L Sbjct: 185 GYYNLLMLDAQLAMSRKNLALADTTLQMIRLQYDAGQLTSLAVQQQEASRQSIALAIPQL 244 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 E+ + + +S L G PAT F + + F + I GIP+ L++NRPD+R Sbjct: 245 EQRTAVQENALSLLCGRMPATIF-----RDRSLFTLKVVDTIPAGIPSALLQNRPDVRAA 299 Query: 282 EKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDN--SFPGYNTHWSFGPKLYLPIFD 336 E + + A +G AK+ LYPSL++ G AL + +FPG + G L PIF Sbjct: 300 ELAVRAAHANMGEAKATLYPSLTITAEGGVNALRSSDWFTFPGSLFGFVQGA-LLQPIFQ 358 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++K+ +++ + +++ VL A+ EV +AL ++ + K V + + Sbjct: 359 HGQLKAKYEQSKIERDQSEFAFKQAVLKAVGEVSDALVAVEKVKTQELIAAERVATLQTA 418 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S S + +R G + L+++ + + E+ L+ +RQ + +LY ++G G+ Sbjct: 419 HSNSGMLFRSGMATYLEVIVAQTNALQAELALADIRRQHLAALAELYRSLGGGW 472 >gi|254228068|ref|ZP_04921498.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Vibrio sp. Ex25] gi|262395954|ref|YP_003287807.1| putative outer membrane protein [Vibrio sp. Ex25] gi|151939564|gb|EDN58392.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Vibrio sp. Ex25] gi|262339548|gb|ACY53342.1| putative outer membrane protein [Vibrio sp. Ex25] Length = 500 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/479 (24%), Positives = 223/479 (46%), Gaps = 50/479 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNL 73 LAGC VGP+Y P + T + N+ + ++ WW F+D LN++V+ QN+ Sbjct: 15 LAGCAVGPDYQAPTTSMAETYLNAENAGLSTDSQPVEFWWTKFHDPVLNQMVQDIQSQNI 74 Query: 74 TILQATERINAAKENILSVRADLFPS---SYASISHRFIPN----------LKTNSTG-- 118 + A ER+ A V + P+ ++++F N L + +G Sbjct: 75 PLKVAAERVKMANNYKTMVESFKVPTINLGAGYMNYQFSKNDSSLGPILNPLSDSVSGLP 134 Query: 119 -----------QLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--S 158 Q D W++DLFG R +++ A++ AQ+ + LN + + Sbjct: 135 PQIGNITLMDNQHDGVFAGASIAWEVDLFG-RIDRQANAAHIRLEQAQIYQSGLNTVITA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 LI +Y+ + ER+ +A L+ + ++L G S L L + +A + ++ES Sbjct: 194 DLIHNYLQYQGASERLELAKSNLEDQRLTLDLVEKVVRSGYGSDLDLAQAKATLAAMESL 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R DI Sbjct: 254 VPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHS--VPVMQDMVPVGLPSDLLKRRTDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + +D YP L G+ L + D+ F + W + +F Sbjct: 312 RLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSWNLF 371 Query: 336 DKGKIKS----NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 D G+ ++ N R +S+ +++Q TV A+ E E+ L + ++ ++ A++ Sbjct: 372 DGGRGEAIEAINQARFDSAT----LSYQHTVEAALAETESTLFTYGRSQENQRRIGDALK 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + YR G L +LD +R ++ AK Q A + + LY ++G + Sbjct: 428 ATNNAVNKAKSLYRAGLIDHLSVLDAQRQQRMMQDQQVAAKLQTAHATIALYKSLGGDW 486 >gi|325917711|ref|ZP_08179901.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] gi|325536073|gb|EGD07879.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] Length = 491 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 27/465 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNS---------KNLINIDTLKWWESFNDTSLNKL 64 +L+GCT+ P YT+P P+ P F+ S + ++ + W E F D +L ++ Sbjct: 11 VLSGCTMMPRYTRPDAPV-PDHFAGAGSAPTPDAAETEQARSVADIGWREVFTDPALQQV 69 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPN----L 112 + +ALQ N + A I A+ RA L P+ + + + IP Sbjct: 70 IALALQNNRDLRVAALNIEVARAQYRVERAALVPAIDGTGTANNSRTPTELAIPGQPAVF 129 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T S S +++DLFG+ R + E +L S +++++++ +Y+ + Sbjct: 130 RTYSANIGISAYELDLFGRVRSLKEQALQQFLSTAEARRSTHISLVAEVATAYLTLAADQ 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + +A L + L F G S+L+L + + +++ D+ + + Sbjct: 190 ASLQLAQSTLSSQSDSYRLQQRSFELGVASQLTLRQAQTTVETARVDVERYTAQVAQDRN 249 Query: 232 NISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + L+G E L + N+ + G+P+ L++ RPDI E+ L + Sbjct: 250 ALVLLVGTAVPESLLPRALPDGASVDGNVLASVPAGLPSQLLQRRPDILEAERNLRAANG 309 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS+SL GS+ + N F WSF P L LPIF+ G+ ++N+ A Sbjct: 310 NIGAARAAFFPSISLTGSVGSSSSSLSNLFDSGTRAWSFVPTLTLPIFNAGRNRANLDMA 369 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ + +++++ +A +EV +AL + + + Q V+ S LS + +G Sbjct: 370 KANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQAQQALVDATADSYRLSQARFERG 429 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S L LD +R+ + L + + V Y A+G G+ P Sbjct: 430 IDSYLQALDAQRSLYSAQQTLISTQLSRFTNLVTFYKAMGGGWLP 474 >gi|262371896|ref|ZP_06065175.1| outer membrane protein [Acinetobacter junii SH205] gi|262311921|gb|EEY93006.1| outer membrane protein [Acinetobacter junii SH205] Length = 486 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 224/459 (48%), Gaps = 25/459 (5%) Query: 8 FSLFIVLLAGCTV--GPEYTKPHM-PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 S + LA C GPE P + +P F+ ++ + +I + + F D L ++ Sbjct: 14 ISALALSLAACQSMRGPE---PVVNTAIPESFASYSNASGTSIAEQGYKDFFADPRLLQV 70 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTN---STGQ 119 + ++L N + A I A++ + P+ AS S + P+ N ST Q Sbjct: 71 IDMSLANNRDLRTAALNIQKAQQQYQISENNQLPTIGASGSAVRQVTPSRDPNNPYSTYQ 130 Query: 120 LD---SDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLIPSYIDARHFKER 173 + + +++D +G+ R ++ A LDS A D ++++I ++ ++++ + Sbjct: 131 VGLGLTAYELDFWGRVRSLKD--AALDSYLATQSSRDATQISLIGQVTQAWLNYSFASAQ 188 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A Q L +++ L+ +F G S++ + + + +++ +D+ + + + Sbjct: 189 LKLAEQTLKAQQESFNLNKKRFDVGIDSEIPVRQAQISVETARNDVANYKTQIAQAQNLL 248 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G P E L Q+ + Q N+ + G+P+DL+ NRPD++ E +L+ + A IG Sbjct: 249 NLLVGQPVPENLLPKQQVARITQKNV---LTAGLPSDLLNNRPDVKVAEYQLSAAGANIG 305 Query: 294 IAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ L+P++SL GS + F N WS GP + +PIFD G ++N++ +E+ Sbjct: 306 AAKARLFPTISLTGSAGYASTDLSDLFKSGNALWSIGPSIDMPIFDWGTRRANVKISETD 365 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++++V +A +EV +AL + ++ + V+ + LS +R G S Sbjct: 366 QKIALSNYEKSVQSAFREVNDALATRANIGDRLSAQRRLVDATNTTYKLSNARFRAGIDS 425 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +LD +R+ E L + ++ + V+LY +G G Sbjct: 426 YLTVLDAQRSAYSAEQGLLLLQQADLNNQVELYKTLGGG 464 >gi|225692172|gb|ACO06753.1| EmhC [Pseudomonas fluorescens] Length = 485 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 222/476 (46%), Gaps = 41/476 (8%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL I V+L+GC++ P+Y +P P+ Q+ G + N W + F+ Sbjct: 3 KSLLSLTIAAVVLSGCSLIPDYQRPEAPV-AAQYPQGPAYESANAPGQAAAEQGWKQFFH 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L+++AL+ N + A I+A RADLFP S+ S S + +P + + Sbjct: 62 DPALQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSATGSGSRQRVP-ARAS 120 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 +G+ S +++DLFG+ R + E +L + + ++++++ + + Sbjct: 121 QSGEAGISSSYSATLGISAYELDLFGRVRSLSEQALQSYFATEEARRSTQISLVANVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP--T 221 Y+ + KE + + + L Y ++++L+ G S L L + +++ + T Sbjct: 181 YLTWQADKELLKLTQETLGAYDQSLKLTSRSAEVGVASALDLSQARTAVENARVQLARYT 240 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIPINIGIPADLIRNRPDI 278 + + N + PA N QP +L + G+P++L++ RPDI Sbjct: 241 RQVAQDENSLTLLLGTSLPANL----------NTQPLSDDLLSEVPAGLPSELLQRRPDI 290 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 E+ L + A IG A++ +PS+SL G+++ F G + W+F P++ LPIF Sbjct: 291 LQAERNLLAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWTFAPQINLPIF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++++ A+ +++ + A +EV + L + + + V ++ Sbjct: 351 NAGSLRASLDYAKIQKDINVANYEKAIQTAFQEVSDGLAARRTYNEQLQAQTAYVASNQD 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G S L LD +R + L + S V+LY A+G G+N Sbjct: 411 YYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWN 466 >gi|46203043|ref|ZP_00052181.2| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 434 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 107/411 (26%), Positives = 207/411 (50%), Gaps = 20/411 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++LV++ N ++ QA A+ + RA LFP+ + S R N Sbjct: 6 WWSVFRDLELDRLVRLIDVDNQSLRQALSAYEQARAVVQQTRAQLFPTVIGAPSIRQSGN 65 Query: 112 ---LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +T T Q + W++DLFG+ RR IESS A+ ++ A V + +L + S+L +Y Sbjct: 66 GNVARTTLTLQGSASWELDLFGRIRRGIESSAASAQASAANVALVRLTLQSELTTNYFQL 125 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R+ + + + + Y+K++E++ ++ G ++ ++ E ++++ ++ +E Sbjct: 126 RYQESLQRLLTETIAAYRKSLEIARNQYAAGVAARSDVITAETQLQTTQAAAIAVELRRA 185 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 H I+ L G+P +E + Q + + P+ IP ++ P+ L+ RPDI E+ + Sbjct: 186 TFAHAIAILTGHPPSE-ISVPQGRLASRLPS--IPGSL--PSRLLERRPDIAQAERLVQA 240 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A+IG+A + YPS++L+ S + D + F N WS +FD G + + Sbjct: 241 QSARIGVAVAAFYPSVNLSASGGIAGDPTGVFFAAGNQFWSVTGAATEVLFDGGARSAAL 300 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R A ++ T++++VL A +EVE+ L ++ Q A L +++ +++ Y Sbjct: 301 RAARAAYDATVATYRQSVLTAFREVEDGLAGARILERQQQVQQAAAALAIRAVEIALNEY 360 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIA--KRQLAK--SYVDLYIAIGSGYN 451 R G + ++ + +E++ +A + QLA+ + V L A+G G++ Sbjct: 361 RAGTQNYTTVITAQ----AIELNSRVAVLQLQLARFTNVVGLIRALGGGWD 407 >gi|149928358|ref|ZP_01916599.1| outer membrane efflux family protein [Limnobacter sp. MED105] gi|149822943|gb|EDM82188.1| outer membrane efflux family protein [Limnobacter sp. MED105] Length = 476 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/473 (24%), Positives = 217/473 (45%), Gaps = 46/473 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLL----PTQFSIGNS-KNL-----INIDTLKWWESFNDT 59 L V L+ C V T P +P P QF + +NL + ++WWE FND Sbjct: 12 LPFVFLSACAV----TTPKLPSTETKPPEQFVAQDILQNLSSVKDAGVAGVRWWEGFNDP 67 Query: 60 SLNKLVKIALQQNLTILQATE---------RINAAKENILSVRADLFPSSYASISHRFIP 110 LN+LV ++Q N I A ++ A +++L +L S R Sbjct: 68 VLNELVSTSIQNNFQIAAAAARVKEARALLELSEAGDSLL---VELDAEVSGQKSDR--D 122 Query: 111 NLKTNSTGQ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 N ++STG L IDL G+ + ++ ANL + A + + Sbjct: 123 NNTSSSTGSNNARDERSALLGLGFTLPIDLAGRVENEVRAAAANLMAEQAGLRAQIIETS 182 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + Y+ R ++++++ + ++L +K + + +F G + +L + + E ++++ + Sbjct: 183 TAVAQEYLSLRGNQKQLAMLRESVELQEKTLAIVQARFESGLSPELDVRRAETSVENLRA 242 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 I L+++ + + H ++TL G + ++ + + + L IP+++ P +I+ RPD Sbjct: 243 SIAPLQQALQDSRHRLATLSGQFPGAYEQLLKPEGDLPEYGLGIPVSV--PFQVIQARPD 300 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPI 334 ++ + + A + A +G+A++D YPS+ L N I T NS P + S L + Sbjct: 301 VQLVQARFAQAAADVGVAQADFYPSIELMANIQIGSTAINSNPATSILIGSLAALLNQVV 360 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 +D G + + A + A+ +++ + +EVEN+LT+I T L AV K Sbjct: 361 YDGGTRDARLNAAVARAEGALAEYEQVLRVVTQEVENSLTAIESSSSRQTALGKAVVSSK 420 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +S + Y+ G S LD++D +R A E L+ + A L+ A+G Sbjct: 421 RSFEQADALYQLGLVSFLDVVDAQRVYANAEQALATEQTNYATLIAGLFRALG 473 >gi|28871442|ref|NP_794061.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854693|gb|AAO57756.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331018026|gb|EGH98082.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 486 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/475 (23%), Positives = 220/475 (46%), Gaps = 40/475 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ PEY +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPEYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIETALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPADQSQ 121 Query: 116 STGQLD----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 ++ S +++DLFG+ R + E +L S+ ++++++ + +Y Sbjct: 122 TSQSAISSSYSATLGVSAYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVANVANAY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + KE + + L Y+++ L+ G +S L L + ++S + + ++ Sbjct: 182 MTWQADKELLKLTQDTLKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARARLAQYQR 241 Query: 225 SFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + +++ LLG PA+ L ++ + G+P+DL++ RPDI Sbjct: 242 LVAQDQNSLVLLLGTGLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPDI 291 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIF 335 E L + A IG A++ +PS+SL S + F G + W F P + +PIF Sbjct: 292 LQAEHSLKAANANIGAARAAFFPSISLTASAGTSSTELSGLFKGGSGTWLFQPSINIPIF 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++++ ++ + +++++ A +EV + L S + + + V ++ Sbjct: 352 NAGNLRASLDYSKIQKEISVANYEKSIQTAFQEVSDGLASRKTYDEQLQAQRDFVTANQD 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 412 YYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|224536428|ref|ZP_03676967.1| hypothetical protein BACCELL_01302 [Bacteroides cellulosilyticus DSM 14838] gi|224521954|gb|EEF91059.1| hypothetical protein BACCELL_01302 [Bacteroides cellulosilyticus DSM 14838] Length = 454 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 219/459 (47%), Gaps = 37/459 (8%) Query: 13 VLLAGCTVGPEYTKPHMPL--LPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIA 68 +LL+ C + YTK + P+ +P Q G S++ +++ + W E F D L L+++ Sbjct: 13 LLLSSCGI---YTK-YEPVTSIPDQLYGGEVVSEDTVSLGNMDWRELFTDPYLQSLIEVG 68 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSD 123 LQ N A R+ A+ ++S + P+ +A + + T Q + + Sbjct: 69 LQTNTDYQSAQLRVEEAQATLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTAS 127 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQ 179 W++D+FG+ R+ + L YAQ + + V ++LI +Y E+++I+ Q Sbjct: 128 WELDVFGRMRNAKKQSQAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLAISRQ 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + +K+ + + G ++ ++ ++EA ++ + L K ++++ LL Sbjct: 185 TEEAWKETVASTRALMNAGMANESAVSQMEATYYQVQGSVLDLRKQINQAENSLALLL-- 242 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A HY ++ + Q ++GIP ++ RPD+R E+ L + A+S Sbjct: 243 -AETPRHY--ERGSLAQQQFPTDFSVGIPVQMLSGRPDVRSAERSLEAAFYGTNKARSAF 299 Query: 300 YPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPS++L+GS T+ PG + G L P+F++G++ + R A + +E Sbjct: 300 YPSITLSGSAGWTNSAGVMILNPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAA 358 Query: 356 ITWQETVLNAIKEVENALTS--INEDKKIVTKLQHA-VELHKKSMSLSMINYRQGRYSLL 412 + +Q+T+LNA EV +ALT+ ++ KK++ Q A ++ +S SL M G + L Sbjct: 359 LGFQQTLLNAGSEVNDALTAYQTSQGKKLLLDKQVASLQTALRSTSLLM---EHGNTTYL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++L + ++ + +S ++L+ A+G G N Sbjct: 416 EVLTARQTLLSAQLSQTANHFTEIQSLINLFQALGGGQN 454 >gi|226194757|ref|ZP_03790349.1| outer membrane efflux protein OprC [Burkholderia pseudomallei Pakistan 9] gi|225933101|gb|EEH29096.1| outer membrane efflux protein OprC [Burkholderia pseudomallei Pakistan 9] Length = 1576 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 117/469 (24%), Positives = 212/469 (45%), Gaps = 47/469 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW +F D L+ L Sbjct: 1098 VGPDYRRPDVATPAAFKEAPALAPGEQAGTWKAAEPADAAHRGEWWRAFGDPVLDALETQ 1157 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP S + +F P TN+ Sbjct: 1158 ALAANQNLKAAAARVEQARAATRAARSQWFPQVGVGFGPTREGLSSASQFQPQGSGPTNA 1217 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 1218 TLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRRLDS 1277 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 1278 DQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 1337 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + + Sbjct: 1338 LAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAMMAA 1388 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G+ Sbjct: 1389 NARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGGRRS 1448 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A + E+ +++ VL A +EVE+ L + + AV +++ LS Sbjct: 1449 AGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAKLSR 1508 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 1509 TQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGW 1557 >gi|167031768|ref|YP_001666999.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166858256|gb|ABY96663.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 504 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 212/459 (46%), Gaps = 34/459 (7%) Query: 18 CT-VGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 CT VGP++ KP P L P G S D +WW F D L+ L+ A Sbjct: 17 CTQVGPDFEKPQAPWLDGWSTPMLEQAGRSAT--TPDLRQWWAVFADPMLDALIAEADAN 74 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------------ 119 N + A RI A+ + V+ +P +S + + LK N +G Sbjct: 75 NTNLRVAGLRIAEARAQLAIVQTGRYP-QLQQLSAQSL-YLKQNQSGTATARDSVFWQSS 132 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D W+ID +G+ R IES+ A ++ A A L + +++ +Y R + R+ I Sbjct: 133 VGFDIGWEIDFWGRFSRAIESADALYFASQANYADAMLLLRAQVADTYFALRTAEARLDI 192 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + +++E++ F G +L + + + + IP E + + +L Sbjct: 193 AQENAKRQARSLEITERLFRHGEHDELDWQQARTQYLATLATIPEFENQLNALRNVLCSL 252 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LG P Q Q+ + Q L +P I +PA+L++ RPDIR E+ +A A +G Sbjct: 253 LGRPPGPL---PQLQAGHGQ--LPLPERAILQDVPANLLQRRPDIRAAEQAVAAQSALVG 307 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +A++DLYP LSL GSI T ++ NT + GP L FD G+ K+ +R ++ Q Sbjct: 308 VAEADLYPQLSLLGSIGWTFLSASHLPNTFDLAAGPSLIWNPFDYGRRKNAVRVEDARLQ 367 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +Q+ V A +E ++A + + + T A + ++S++L+ YR+G Sbjct: 368 QLIELYQQGVREAAREADDAASGLVRSLQSATIRDQASQAAQRSLTLASSQYREGFADFQ 427 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ++ + + +++ S V LY A+G G++ Sbjct: 428 RVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466 >gi|257461016|ref|ZP_05626114.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter gracilis RM3268] gi|257441390|gb|EEV16535.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter gracilis RM3268] Length = 485 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 200/464 (43%), Gaps = 24/464 (5%) Query: 1 MNILRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 M I A+ S +LL GC KP P T F + N+ T +WW+SFND Sbjct: 1 MKINNALLSALTLGILLCGCNF-----KPVTPQKQTGFKADYAS--TNVST-QWWKSFND 52 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKT 114 LN L++ AL+QN + A + A+ N+ + + P S A + F Sbjct: 53 PQLNALIQSALEQNSDLQTALNNVEYARVNLGLNKLEYLPNVNLSGSAVRQNNFGNRPDR 112 Query: 115 NSTG--QLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 NS G Q+ + ++ID +G+ R ++S+ A ++ + AK + S + +Y Sbjct: 113 NSHGSYQIGAVLSYEIDFWGRVRNSVDSAQAKFNATKYDYETAKNTITSTVATTYFTLLA 172 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 K++ I L Y+ + GA S++ + +A ++S E+ + +++ Sbjct: 173 LKQQEKILKDSLKSYQDTQNYRKKQLDAGAVSEIVFYQAKAAVQSAEASLISVQNQLSAA 232 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +++ L G E L + + IP GIP+D+I +RPD+ + L S Sbjct: 233 QTSLNILTGKSYDEILRGTAQTAAKMPSAPQIP--SGIPSDVILHRPDVASSLENLRSSN 290 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +G+AK+ +P+ SL GS D F + WS G L P+ D G+ K + Sbjct: 291 FLVGVAKAGYFPTFSLTGSAGYASGEFDRLFTANASTWSIGGSLVGPLLDFGRQKRRVEL 350 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A +I + + + A +V +AL + K L V K S + Y+ Sbjct: 351 ANLEQNASFIAYDKALKTAFGDVRDALVGVQNAKLRQASLADLVASQSKIYSNASSRYQA 410 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G L+ LD +R +++ A + + V+ Y A+G G+ Sbjct: 411 GYSDHLEFLDSQRNLLSAQLNKVQADLDVLSATVNAYKALGGGF 454 >gi|221212391|ref|ZP_03585368.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221167490|gb|EED99959.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 494 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/473 (24%), Positives = 212/473 (44%), Gaps = 43/473 (9%) Query: 17 GCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKLVKIALQ 70 GCTVGP+Y P P PT + ID WW + +D L+ L+ AL Sbjct: 23 GCTVGPDYRGAPAAPDTPTFVRAPAT----GIDAGAPAPSAWWHALHDRRLDALIAAALA 78 Query: 71 QN------------------------LTILQATERINAAKENILSVRADLFPSSYASISH 106 N L AT +E +S L PS+ + S Sbjct: 79 HNPDLHAAQARLRAARAQLAQQRAAELPKASATVAAIRMREPDVSTLGALLPSNGSGQSG 138 Query: 107 RFIPNLKTNS----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L T + D+ W+IDLFG RR IE++ A D+ A + ++++ +++ Sbjct: 139 SAPATLGTGPLQLYSAGFDATWEIDLFGGTRRAIEAASAQADAVDADLADTQVSIAAEVA 198 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+D R ++R++++ + +L ++ + L+ + +G + + +L ++++ + + Sbjct: 199 TAYVDLRDRQQRLALSRRTAELQQQMLALTQQRRARGVAADADIERLTTQVENTRASLIP 258 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ ++ ++ L G + + + P L + +G PA L++ RPDIR Sbjct: 259 LDAQVTESLDRLAILTGREPGALDAELSTEEASL-PALPASVPVGDPAALLKRRPDIRAA 317 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKG 338 E++LA S A+IG +D +P ++L G + + + F N W P L I D G Sbjct: 318 ERRLASSNAQIGEHVADYFPKVTLLGDLGFSATDPAHLFRKQNASWIGAPYLQWNILDFG 377 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + +R AE++ E +++ VL A+++ AL + V L S + Sbjct: 378 RTRGAVRAAEAARDEADANYRKAVLGALQDANTALQRYGHQRDHVVALTKVQASATHSAT 437 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L YR G S++D+LD +R + ++ A+ +L K YV + ++G G+ Sbjct: 438 LMSERYRAGVASMIDLLDTQRESLAARQNVIAAQAELIKDYVSVQKSLGLGWQ 490 >gi|218782660|ref|YP_002433978.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfatibacillum alkenivorans AK-01] gi|218764044|gb|ACL06510.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfatibacillum alkenivorans AK-01] Length = 469 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 216/465 (46%), Gaps = 35/465 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L AGC++ P+YT+P P+ + ++ +D L+W E D +L ++ Sbjct: 12 LTLLAAGCSLKPQYTRPEAPVSQDWPEAQAAAQAVAERSQPMD-LEWREFITDQALQVVI 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLDSD 123 + AL+ N + A + + RA+LFPS + S SH P + S +SD Sbjct: 71 QTALENNRDLKLAILNVQRVQALYGVQRAELFPSIGASGSSSHTKTPADLSYSGQITESD 130 Query: 124 ----------WKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHF 170 W+ D FG+ R ++ A L+S A + A++ +IS + +Y+ Sbjct: 131 SYRVDLGVTAWEADFFGRIRSLKD--AALESYLATEEAQRSAQIALISAVANAYLKLAAD 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + ++ L K L +F G S+L L++ + ++++ DI + + Sbjct: 189 QEHLKLSESTLQSQKDAYHLIKSRFELGLASELDLLRAQTQVETARGDIALFTRLISQDK 248 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L G ++ N QP + +++GIP++ + RPDI E +L + A Sbjct: 249 NALILLSGTTVPLPERVFPQKLENVQP--FKSVSVGIPSETLLTRPDILAAEHQLKAANA 306 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P ++L GS+ + F WSF P++ +PIFD ++ S + + Sbjct: 307 NIGAARAAFFPRIALTGSVGTASVELSDLFGSGQGTWSFMPQISVPIFDP-RVYSAYKVS 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ +++ + A +E +A+ N + ++ + VE KS +L+ + Y +G Sbjct: 366 QADMDIAVAQYEKAIQTAFRETADAIAVENTVGEQLSAGEALVEALDKSYTLAGVRYDKG 425 Query: 408 RYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSG 449 S L +LD +R+ + +D+ IAK LA + LY +G G Sbjct: 426 IDSYLSVLDAQRSLYSAQQQLIDIRIAK--LANQ-IRLYTVLGGG 467 >gi|17549260|ref|NP_522600.1| putative outer membrane channel lipoprotein transmembrane [Ralstonia solanacearum GMI1000] gi|17431512|emb|CAD18190.1| putative outer membrane channel lipoprotein transmembrane [Ralstonia solanacearum GMI1000] Length = 485 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 113/450 (25%), Positives = 198/450 (44%), Gaps = 29/450 (6%) Query: 24 YT-KPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNLTILQATE 80 YT P P G + L+ + +WW F +LN LV+ AL+ N + A Sbjct: 31 YTPTPPAPTASAPVEGGQVQRLVEGQEVAGQWWTMFGSGALNALVEAALKANPDLQSAEA 90 Query: 81 RINAAKENILSVRADLFPS---SYASISHRFIPNLKTN----------STGQLDSDWKID 127 + A+EN+ + R FPS AS + L + T QL + D Sbjct: 91 ALRVAQENLAAARGSFFPSVDAQMASTRQKTAAVLASPLASGNLLYSLHTAQLTVSYAPD 150 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 +FG RR +E+S A + A Q + A L + + ++ + I + ++ H+ + + + Sbjct: 151 VFGGVRREVEASAAQAEVAAFQREAAYLTLTANVVAAAIQEASLRAQVQATHEAVAVASR 210 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFL 245 + + G + E+ + IE+ +P LEK + I+ L G +P+ Sbjct: 211 LLAAVRKQRQLGQLGAADVAAQESALAQIEATLPPLEKQLALQRDLITVLAGRFPSETIT 270 Query: 246 HYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + +S L +P + + +P+ L+ RPDIR E +L + A IG+A + PS+ Sbjct: 271 QTFELES------LQLPQALPLSLPSRLVEQRPDIRAAEAQLHAASAHIGVATAARLPSI 324 Query: 304 SLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L+ GS AL F G W + PIF G + R AE++ + + Sbjct: 325 TLSADLGSSALAFSKLFTGGTGFWGLTGGIAQPIFRGGTLLHQQRAAEAAYDQAAAQCRS 384 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVL A + V + L +I+ D + + HA + +KS++++ + G + +L E+A Sbjct: 385 TVLTAFQSVADTLHAIDADARALQAASHAADAARKSLTIAQRQWTLGLIAYPAVLQAEQA 444 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + V L+ A+ V L A+G G+ Sbjct: 445 YQQSLVSLAQARAGRLADSVALLQALGGGW 474 >gi|209516255|ref|ZP_03265113.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209503366|gb|EEA03364.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 524 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/446 (24%), Positives = 207/446 (46%), Gaps = 35/446 (7%) Query: 20 VGPEYTKPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 VGP+Y +P + P + S I D WW F D +L L AL QN Sbjct: 32 VGPDYQRPQAEVPPEWHTDSFWRVAAPSHAPIAPD---WWTGFADPTLATLETQALAQNQ 88 Query: 74 TILQATERINAAKENILSVRADLFP-------SSYASISH-RFIPNLKTNSTGQLDS--- 122 T+ A+ AK + + A P +S ISH R + N T + + + Sbjct: 89 TLAAASAHYEQAKATLANASAQRVPEVDFNAQASRFRISHDRPLTNYATPTVSTVQNSIQ 148 Query: 123 -----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 ++ DLFG+ RR +E + A+ + + + A+L + + L Y R I + Sbjct: 149 LGPTINYDTDLFGRIRRQVEGAQASAEQSADDLANARLVLTTDLATDYFSLRELDNEIDV 208 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +Q + L +K ++ + + G+ S L +++ ++++ S L H I+ L Sbjct: 209 LNQSVKLQQKALDYVNTEHELGSVSGLDVLQQKSQLDSTRVQAQQLLNQRAQFEHAIAAL 268 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA +F ++ + + +P + +G+P+D+++ RPD+ E+ +A + A+IG+AK Sbjct: 269 VGVPAPQFA--IEPKVLDIRPPT---VPLGVPSDVLQRRPDVASAERAMAAANAQIGVAK 323 Query: 297 SDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PSL+L I N W+ G + IFD G+ +N++ A + Sbjct: 324 AAFFPSLTLTPGIGWESTEFANLLSAPTLMWTLGATVGQVIFDGGRRAANVKFASEGYKA 383 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A ++V++ +T ++ + + AVE ++ +SL+ Y G + L+ Sbjct: 384 TEANYRQTVLTAFQQVQDGVTGLSVLDGAAKQSREAVEDAQRLLSLANDRYSGGLVAYLN 443 Query: 414 ILDIERATAKVE-VDLSIAKRQLAKS 438 ++D + + E D+ I +QL S Sbjct: 444 VIDAQESLLTSERTDVQIHGQQLTLS 469 >gi|152980456|ref|YP_001353256.1| outer-membrane drug efflux protein [Janthinobacterium sp. Marseille] gi|151280533|gb|ABR88943.1| outer-membrane drug efflux protein [Janthinobacterium sp. Marseille] Length = 485 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 36/465 (7%) Query: 13 VLLAGCTVG--PEYTKPHMPLLPTQFSIGNSKNLI----------NIDTLKWWESFNDTS 60 ++LAGC+ PE K +P + S + L N D WW+ F D Sbjct: 15 LVLAGCSTARPPEELKLDLPNAYREQSTVKANELDGAWKLAAPADNKDRGAWWKVFGDEQ 74 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--- 117 L+ L+ A NL + A R+ A+ V AD A + N + ST Sbjct: 75 LSNLIVEAGNSNLNLAIALARVKDARAIAGVVDADRGVQVDAGVGPTRSGNAQGASTQYR 134 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDS-----AYAQVDIAKLNVISKLIPSYIDARHFKE 172 L +++DLFG R S A LD+ AY V +A + S + Y R Sbjct: 135 APLSFAYEVDLFG-RLSDASRAARLDAEGQEAAYRSVLLA---LQSDVAQQYFTIRSLDS 190 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + + + L ++ ++L+ +F G TS+L + + + E + +++ +++ H Sbjct: 191 EVDVLEKTVALRQEALDLTQRRFDAGDTSELDVAQAKTEWATTSAELEGVKRQRAQRDHA 250 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ LLG EF + + + + G+P+DL+ RPDI +++LA S A+I Sbjct: 251 LAILLGKAPAEFTLPVAPLAAAV-----VTVPSGLPSDLLERRPDIAQAQRQLAASSARI 305 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPK----LYLPIFDKGKIKSNIR 345 G AK+ +P L L GS + + F + W GP L +P+FD G+ +SN+ Sbjct: 306 GAAKAAFFPKLLLTGSAGYESNELRDLFKWSSRSWMLGPVVGTILSMPLFDGGRNQSNLA 365 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 RA+++ + ++ VL ++VE+ L+++ + + + AV + + L+ YR Sbjct: 366 RADANYEALVANYRLQVLVGFQDVEDNLSALRTLDRQLQFEEQAVNSAQLASRLADTRYR 425 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +++D +R++ + + Q A + V L A+G G+ Sbjct: 426 YGSASYFEVIDAQRSSLSSQRSKIRSTGQRAVASVGLIRALGGGW 470 >gi|158137909|gb|ABW17373.1| OprM [Pseudomonas putida] Length = 482 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 216/470 (45%), Gaps = 33/470 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP------HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 R+ L LL GC++ P+Y +P H P P G+ + +D W + F D Sbjct: 3 RSSLILCAALLCGCSLAPDYQRPGAAVAAHYPQGPA--YQGDVQAHPAVD--DWRQVFQD 58 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS 116 L +L+ AL N + A + A + RA+L P S+ +++P T + Sbjct: 59 PVLRQLIDNALANNRDLRSAALNVEAYRAQYRIQRAELLPKVSANGQGQRQYLPRRMTGT 118 Query: 117 -TGQLDSDW---------KIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 G + S + ++DLFG+ R + ++ L L S A+ +L++++ + Y Sbjct: 119 DQGMISSTYAATLGVSAYELDLFGRLRSLSDQALLTYLASDQARRST-QLSLVASVASVY 177 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R +E +++A+ L ++++ L+ + G S L ++ + S + + ++ Sbjct: 178 LTWRADQELLALANDTLVADERSLRLTVNQRRAGTVSALDQIQARTSVDSTRAAVARYKR 237 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 +++ ++ L+G P + L + + + G+P+DL++ RPDI E + Sbjct: 238 QVAQDLNQLTLLVGAPVADDLRALPLANEQI-----AGLQAGLPSDLLQRRPDIVQAEYQ 292 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +PS+SL GS + F + W F P++ LPIF G ++ Sbjct: 293 LRAANADIGAARAAFFPSISLTANAGSTSPALSGLFDAGSGTWLFQPQINLPIFTAGSLR 352 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ A + Q +Q+ + A +EV + L + ++ + + V +++ L+ Sbjct: 353 ASLDYARLQKEIQVAQYQKAIQGAFQEVADGLAARATYQRQLQAQRDLVASNQRYYDLAE 412 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L LD +R+ + L + + V+LY A+G G+ Sbjct: 413 HRYRIGVDSSLTFLDAQRSLFSAQQGLINDRLAQLVAEVNLYAALGGGWQ 462 >gi|167743808|ref|ZP_02416582.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 486 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 48 TLEQFDWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 107 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 108 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 164 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 165 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 224 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 225 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 279 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 280 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 339 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 340 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 399 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 400 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 459 Query: 448 S 448 Sbjct: 460 G 460 >gi|167850827|ref|ZP_02476335.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei B7210] gi|167916104|ref|ZP_02503195.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 476 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 38 TLEQFDWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 97 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 98 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 154 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 155 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 214 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 215 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 269 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 270 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 329 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 330 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 389 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 390 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 449 Query: 448 S 448 Sbjct: 450 G 450 >gi|162148623|ref|YP_001603084.1| multidrug efflux MFS outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787200|emb|CAP56793.1| putative multidrug efflux MFS outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 469 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 209/472 (44%), Gaps = 29/472 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MN+ R L ++++AGCTVGP+Y PH P Q+ ++ +WW F+D Sbjct: 1 MNMTRTASILALIVIAGCTVGPDYVAPHAE-APPQWLGQPGVPSQSVPDERWWAGFHDPQ 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L++L+ AL +N + A +R+ AA++ I R + SS N + + T Q Sbjct: 60 LSRLIHEALIRNNDLAAAEKRVEAARDQI---RIEAAASSPVIGLGGIAENRRQSQTIQW 116 Query: 120 ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 D W++DLFG RR E++ A+ A+ D +L +++++ Sbjct: 117 PPRASAGDYRYWSLGFDGSWELDLFGMTRRRTEAARASQAEMAAERDGLRLRLLAEVGAD 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R+ +A + L +L ++ GA + + EA++ + + +P L Sbjct: 177 YVTWCAALARLQVAEDRIALVAHQRDLVTHEWRAGARGHADVDQAEADLAAAQQTVPPLV 236 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + N +L E + + +F L +P++++ RPDI+ Sbjct: 237 AQA-TEMKNALAILTATTPEAMQLTPR--ADFSIPLPPARPPSLPSEMLTRRPDIQAATF 293 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKI 340 + A A+IG+A + LYP +++ +T + T W G I+ G+ Sbjct: 294 RYARDNAEIGVAVASLYPKVAIPLDFGVTTSTLHQAFTTASLLWQLGVTAGETIYAGGRR 353 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + I A ++ +++ VLNA+++VE+ L +I + + + + ++ + + Sbjct: 354 TAQIDAARLQRDAAWLGYRQAVLNAMRDVEDRLATIGDASARTSSVNLELASARERLMHT 413 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKR-QLAKSYVDLYIAIGSGYN 451 YR G SLL + ++R D IA + LA S + LY ++G G+ Sbjct: 414 EREYRSGEASLLPTI-VDRDLVDQIHDRVIATQLALAISDLALYKSLGGGWE 464 >gi|222111500|ref|YP_002553764.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221730944|gb|ACM33764.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 528 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/507 (22%), Positives = 221/507 (43%), Gaps = 81/507 (15%) Query: 17 GCTVGPEYTKPHMPLLPT------QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC + P Y P +P+ T Q + L + + W + D L +V+ AL Sbjct: 21 GCNLAPRYQTPPLPVPGTMASPLPQPQTAGAVALPDGGPMAWQDFVQDARLRTVVEQALA 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL----KTNSTGQLD-- 121 N + A I+ A+ V+AD FP+ A+ + R +L ++N+T Q Sbjct: 81 NNRDLRVAVLAIDKARAQYGVVQADSFPTVNAAGAGNRSRTADDLTAAGRSNTTSQYSAT 140 Query: 122 ---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S ++ID FG+ R++ +++L +L++++++I +++ R+ +A Sbjct: 141 LGFSSYEIDFFGRVRNLNDAALQEFLRVAENRRSVQLSLVAEVIGAWLTLDADARRLQLA 200 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L ++ +EL+ GA+S L L + ++ + D + + ++ L+ Sbjct: 201 RETLRTRQQALELTQRSHELGASSGLVLAQAQSAADTARVDAAAFVSQLARSRNALALLV 260 Query: 238 GYP---------------ATEFLHYMQKQSNNFQPN------------------------ 258 G P A + QP+ Sbjct: 261 GSPVPPALLPASVATVETAMPVTAMAGPATTATQPSPGTGTADSPAPRSSVPALADPAAP 320 Query: 259 ----LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 L +P ++ P+ ++ RPD+R E L + A IG A++ +PS++L S+ T Sbjct: 321 ATALLAVPADV--PSSVLLRRPDVRAAEHALQGATANIGAARAAFFPSITLTASVG-TAS 377 Query: 315 NS----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 N+ F G N W+F P++ LPIFD G+ ++N+R AE + +++ + A +EV Sbjct: 378 NALSGLFEGGNGTWAFAPQIRLPIFDAGRNQANLRVAEVTRDTAVAQYEKAIQTAFREVS 437 Query: 371 NALTSINEDKKIVTKLQHA---VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKV 424 +AL E + +LQ V+ ++++ LS +R G + L +LD +R A + Sbjct: 438 DALA---ERATLTERLQAQGSLVQATQRTLQLSDARFRLGADNYLAVLDAQRTLYAAQQA 494 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L +A++ + V LY +G + Sbjct: 495 QITLQLAEQ---VNRVTLYKVLGGAWT 518 >gi|56552325|ref|YP_163164.1| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|241761619|ref|ZP_04759706.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543899|gb|AAV90053.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] gi|241373927|gb|EER63460.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 567 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 221/486 (45%), Gaps = 47/486 (9%) Query: 4 LRAIFSLFIV-----LLAGCTVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTLK-- 51 LR + SL V L AGC +GP+Y + P F +K L + L Sbjct: 3 LRRLSSLLTVTVLASLTAGCILGPKYKRSQNAAIERPTAKGNFVSSQNKALTRMPDLPDH 62 Query: 52 WWESFNDTSLNKLVKIALQQN-------LTILQATERINAAKE--------NILSVRADL 96 WW +++ L+KL++ A N I ++T + A++ N + + Sbjct: 63 WWHLYDEPQLDKLIEEAFAHNNDLKVAAADITRSTAALARARDAKRIGTNLNTWANYIEF 122 Query: 97 FPSSYA--SISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 Y S++ IP+ S + S +++D GQ R IE++ A+ ++ + D+A+ Sbjct: 123 SDQRYLVNSVNRPHIPDAFATSLDAIIS-YQVDYLGQLHRAIEAANADEEAVRSAYDMAR 181 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + V + +Y++ I+I +++ L +++ L ++G + + A+ Sbjct: 182 VTVAANTAQAYVEVCATGHDIAITKELIALAERSTALIARMRSEGRAMTTDVRRQMAQEA 241 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 I++ +P ++ + +++ L G P EF + +P L PI +G L+ Sbjct: 242 QIKAALPQQVARKQVALFSLAVLTGRPPAEFPAEVANCEE--EPILRQPIPVGDGESLLN 299 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPKLY 331 RPDIR E +L + A+IG+A +++P ++L + T S F G+ ++ GP L Sbjct: 300 RRPDIRSAEYRLRSATAEIGVAMGEMWPKITLGATAGSTGMASHMFGGHTREFNLGPGLS 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + ++ I A+S + + +TVLNA+KE E ALT+ D L H E Sbjct: 360 WQVPNRNRARAEILAAKSETRIAAAQFDQTVLNALKETEAALTTYTHD------LDHRAE 413 Query: 392 LHKKSMSLSMIN------YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + + GR + L +LD +R + E L + +++ + +++A Sbjct: 414 VALARDRAAAADKDIHRLFSLGRINALPVLDADRTLLQYEQQLVSSDGKISDDQIRIFLA 473 Query: 446 IGSGYN 451 +G G++ Sbjct: 474 LGGGWS 479 >gi|197295434|ref|YP_002153975.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|195944913|emb|CAR57525.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 475 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/475 (24%), Positives = 201/475 (42%), Gaps = 40/475 (8%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSI----------GNSKNLINIDTLKWW 53 R + +L +LAGCT+ P Y +P P+ T ++ + + D L W Sbjct: 3 RTLIALVCTGMLAGCTLDPTYQRPAAPVDNTWSTVPSRSQPKAAQSTAAAPLGAD-LGWR 61 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN 111 + F D L KL+++AL N + A + + RA++ P+ + SI+ + Sbjct: 62 DFFKDPQLQKLIELALVNNRDMRVAALNVAQYEAQYRIARANVGPAINASGSITRERV-- 119 Query: 112 LKTNSTGQLDSD--------WKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVIS 158 STG S W+ID FG+ R+ +E LA D+A I ++I+ Sbjct: 120 --AGSTGAYGSSSASVGLTSWEIDFFGRLRSLKRQALEQYLAT-DAARTSTQI---SLIA 173 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y+ R + + IA +D + +L+ G+ S + + E + S S Sbjct: 174 TVATDYLQLRSDETSLQIAQNTVDADQHTYDLTVNMMKMGSASLQDVRQAENSLASARSS 233 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + ++ + +N+ +G P + L Q S + + I G+P+DL+ RPDI Sbjct: 234 LASYTRAVAQDRNNLVAEIGAPLPDDLP--QGPSLMESEHTFADIGEGVPSDLLARRPDI 291 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIF 335 E L + A IG A++ +P + L S T N F W+F P L +P+F Sbjct: 292 VEAEHTLKAANANIGAARAAFFPKIELTASAGTTSGSLSNLFKAGTGAWTFAPTLSVPLF 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G ++ + A+ +++ + A KEV NAL V + VE ++ Sbjct: 352 DFGYNRATLDVAKVEKDIDVANYEKAIQTAFKEVSNALAGRTTYVTQVAADRDYVESARQ 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L +LD +R + L + + LY +G G+ Sbjct: 412 YYDLAQARYRSGTDSFLTLLDAQRTLYAAQQQLVTDMLAKQSNLITLYKVLGGGW 466 >gi|157412124|ref|YP_001481465.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli APEC O1] gi|218697184|ref|YP_002404851.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli 55989] gi|99867149|gb|ABF67794.1| SilC [Escherichia coli APEC O1] gi|218353916|emb|CAV00346.1| putative outer membrane lipoprotein silC precursor [Escherichia coli 55989] Length = 562 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/462 (23%), Positives = 225/462 (48%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ ++ ++ + W F D + +L+ Sbjct: 113 IFILAGCVSLAPEYQRPAAPV-PQQFSLSHNSLTPAVNGYQDTGWRNFFVDPQVTRLIGE 171 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + A ++ A+ AD +P AS + LK + +L+ Sbjct: 172 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDARLE 231 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 232 LSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIAR 289 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 290 ETLKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 349 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ + + + PNL + ++ RPDI E +L + A IG Sbjct: 350 TYRALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGA 401 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Sbjct: 402 ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ 461 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + +A K+V + L + + + Q ++ + ++ + Y G S Sbjct: 462 QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSY 521 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 522 IEVLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 560 >gi|107026816|ref|YP_624327.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116691991|ref|YP_837524.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|170736015|ref|YP_001777275.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|105896190|gb|ABF79354.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116649991|gb|ABK10631.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] gi|169818203|gb|ACA92785.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 476 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/457 (23%), Positives = 201/457 (43%), Gaps = 35/457 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C++ P KP MP+ + + N L W F D L +L+++AL+ N + Sbjct: 15 CSLAPTLVKPSMPVPTAYTAAAAANPDANAADLGWRTMFGDRRLQRLIELALEHNRDLRV 74 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN------STGQLD-----SD 123 A + AA+ RA PS A S R + ++N + Q S Sbjct: 75 AALNVEAAEAQYGIQRAARLPSIGAGASFTRQRTSDDTQSNPPLFGATQNQYGVNVGISA 134 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS----- 175 ++IDLFG+ + + D+A+A+ D + V L+ DA +F ER++ Sbjct: 135 FEIDLFGRVKSMS------DAAFARYLATDHGRRAVQISLVGGVADA-YFAERLAHEQRQ 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + L ++++++L+ S + + + E ++ S +D+ ++ + + Sbjct: 188 LSERTLADWQQSLDLARRLKEAHQASGVDIAQAEGQVASATADLEARTRAVEQARNALRL 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G TE + + Q + + G+P++L+ RPDI+ E+ L + A IG A Sbjct: 248 LIG---TELPKDLPEPLPLQQQPVMTQLPAGLPSELLFRRPDIQQAEQNLVAANADIGAA 304 Query: 296 KSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P LSL SI + F G WSF P++ +PIF G++++ +R AE Sbjct: 305 RAAFFPRLSLTSSIGFLSPAMGSLFDGGQRAWSFAPQVTVPIFQGGRLRAELRLAEVRKS 364 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ + A +EV + + + + V ++ LS + YR G L Sbjct: 365 SAVAEYERAIQAAFREVADGIAGRETFGRQIEAQTRVVGSAERRADLSNLRYRAGVEGRL 424 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++LD +R L +R + V LY A+G G Sbjct: 425 ELLDSQRQLYAARQALLDLRRSELGNAVALYKALGGG 461 >gi|285019228|ref|YP_003376939.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283474446|emb|CBA16947.1| probable outer membrane efflux protein [Xanthomonas albilineans] Length = 490 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 122/496 (24%), Positives = 221/496 (44%), Gaps = 64/496 (12%) Query: 1 MNILRAI-FSLFIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDT----- 49 M LRA S+ + ++AGCT+GP + P M +P + + ++K +I DT Sbjct: 1 MLCLRAAACSVALCVIAGCTLGPNFKSPAPNYGDMISIPIEQNTASTK-VIGGDTEALQV 59 Query: 50 -----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE---------------NI 89 +WWE + L LV+ A++ N + A E +N AK+ N+ Sbjct: 60 GGEVAGRWWELYRSAELTSLVEQAVRDNPDLQAAGEALNRAKQLELAEGSKRLPTLDANV 119 Query: 90 LSVR--------ADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLA 140 R D+ P+SY SIS+ I + + +DL+G RR IE+S A Sbjct: 120 SQQRRRHAQAEDGDVGPASYYSISNVHIGAV-----------YDLDLWGGIRRSIEASGA 168 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 D A+ +++ A L + S ++ + I+ E+I I I+++ + +++ + G + Sbjct: 169 QTDYAHFEMEAAYLALTSNVVTTVIEKSAIDEKIRIQQHIVEIDQNWLDIMVAQAELGTS 228 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S + ++ + +S + TL H ++ L+G P + + + + + Sbjct: 229 SDFDVALQQSTLAKSKSVMETLLMDREQVQHRLAALMGKPVSA-VSDISIDLDTLRLPRT 287 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSF 317 +P+ + P+ LI RPDI+ E L A +G+A + P ++++G S +L F Sbjct: 288 LPVTL--PSKLIEQRPDIKAAEAVLHAQTALVGVAAAQRLPDITISGRLGSASLDATTLF 345 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + WS + IFD GK + R E++ +E W+ TV+ A + + L+S+ Sbjct: 346 GPGSGLWSVSAGVTQTIFDAGKRRYRQRAQEAAMREADARWRTTVVEAFHSLSDVLSSLQ 405 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQ---GRYSLLDILDIERATAKVEVDLSIAKRQ 434 D KLQ A + + M+ Q G S+L +L ++ ++L A+ Q Sbjct: 406 HD---AVKLQLAANGEMAAHHVQMLLEHQRELGSVSVLKVLAAQQTYQNASLELVQARAQ 462 Query: 435 LAKSYVDLYIAIGSGY 450 V LY +G G+ Sbjct: 463 RFVDTVVLYRELGGGW 478 >gi|313202148|ref|YP_004040806.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312441464|gb|ADQ85570.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 474 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 40/466 (8%) Query: 13 VLLAGCTVG--PEYTKPHMP-------LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++LAGC+ PE +P L + GN + +ID WW FNDT LN Sbjct: 15 LVLAGCSTAKPPEQINLQLPNQYRETAQLDGAWQAGNPAD--HIDRGAWWTVFNDTELNN 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASISHRFIPNLKTNST--GQ 119 L++ A + + T+ A R+ A+ N V AD + + + P+ N+ Q Sbjct: 73 LIEAATESSPTLAIALARVKEARANAGVVDADRKFQLNGGVGPTRQRDPDTSANTEWRAQ 132 Query: 120 LDSDWKIDLFGQRRHIESSLANLDS-----AYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +++ +++DL G R +S A LD+ AY V +A + + + Y R + Sbjct: 133 VNASYEVDLIG-RLSDQSRAARLDAQGQEAAYRSVLLA---LQADIAQQYFTLRALDSEL 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I + +DL ++ + + ++ G +L L K + E+ +++++ ++ ++ H ++ Sbjct: 189 EILRKTIDLRQEELRMVQRRYDLGDIGELDLAKAKTELATVQAEQESVVRNRAQQDHALA 248 Query: 235 TLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG EF L Q + Q + +G+P+ L+ RPDI ++ LA + A++G Sbjct: 249 ILLGKTPAEFTLAAAPLQLSVVQ------VPVGLPSQLLERRPDIAQAQRALAAASARVG 302 Query: 294 IAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP----KLYLPIFDKGKIKSNIRR 346 AK+ +P L L G+ + F + W GP L LPI D G+ K+N+ R Sbjct: 303 AAKAAFFPRLVLTGTGGYESNELHELFKWSSRSWLLGPLVGTALTLPILDGGRNKANLSR 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ + + +++ VL +EVEN L+ + + + + A+ + L+ Y+ Sbjct: 363 ADAVYEREVANYRQQVLVGFQEVENNLSGLRTLDRQIDYQRQAIASASVAERLANTRYKN 422 Query: 407 GRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S +++D +R + V+ ++ A ++ S V L A+G G++ Sbjct: 423 GSASYFEVIDAQRTSLSVQRAEVQTAGLRMLTS-VGLIRALGGGWS 467 >gi|78059938|ref|YP_366513.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77964488|gb|ABB05869.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 480 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 211/461 (45%), Gaps = 43/461 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C++ P+ KP MP+ + + N L W F D L +L+++AL+ N + Sbjct: 19 CSMAPKLVKPEMPVPTAYTTAAAADQHANAADLGWRTMFGDRRLQRLIELALENNRDLRL 78 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---------HRFIPNLKTNSTGQLD-----SD 123 A + AA+ R+ PS A S + P L N+ Q S Sbjct: 79 AALNVQAAEAQYGIQRSARLPSIGAGASFTRQRTAADSQSNPPLLENTQNQYGVNVGLSA 138 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS----- 175 ++IDLFG+ + + D+A+A+ D + V L+ S +A +F ER++ Sbjct: 139 FEIDLFGRVKSLS------DAAFARYLATDHGRRAVQIALVGSVANA-YFAERLAQEQRA 191 Query: 176 IAHQILDLYKKNIELSH-LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L+ ++++++L+ LK A S + + + E ++ S +D+ ++ + + Sbjct: 192 LSERTLNDWRQSLDLARRLKLADQA-SGVDIAQAEGQVASASADLEARSRAVEQAGNALR 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + L S QP + + G+P++L+ RPDI+ E+ L + A IG Sbjct: 251 LLVGTDLPKNLP--DPLSLERQP-VMTQLPAGLPSELLYRRPDIQQAEQNLVAANADIGA 307 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P LSL SI + F G WSF P++ LPIF G+++S + AE Sbjct: 308 ARAAFFPRLSLTSSIGFLSPGLGSLFDGGQRVWSFAPQVTLPIFQGGRLRSELNLAEVRK 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++ ++ A +EV + L + + V+ ++ L + YR G Sbjct: 368 SSAVVEYERSIQTAFREVADGLAGRETFSRQIDAQSRVVKSAERRTDLVNLRYRAGIEDR 427 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R A + +DL A+ + V LY A+G G Sbjct: 428 LELLDSQRQLYAARQALLDLRNAE---LDNAVALYKALGGG 465 >gi|83749141|ref|ZP_00946145.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] gi|207739773|ref|YP_002258166.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] gi|83724200|gb|EAP71374.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] gi|206593155|emb|CAQ60061.1| outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] Length = 476 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 115/465 (24%), Positives = 213/465 (45%), Gaps = 37/465 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ L+ C++ P KP +P+ P F + + L W F D L +L+ AL Sbjct: 8 LVLALSACSLTPALIKPGLPV-PAAFPTESGPETQAHAADLGWRTMFGDRRLQRLIGRAL 66 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI-------PNLKTNSTGQL 120 N + A + A + RA P + S S + P + + Q Sbjct: 67 ANNRDLRLAALNVEAVRAQYHIQRAARLPGIDATGSASRQRTAANDGVSPAVAAANQEQY 126 Query: 121 DSD-----WKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + ++IDLFG+ R + +++ A L SA + + +++++ + +Y R +E+ Sbjct: 127 GVNVGLNAFEIDLFGRVRSLSDAAFARYLASAEGRRAV-QISLVGAVADAYFAERLAQEQ 185 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A L ++++++L+ T S L + + E ++ S E+D+ ++ + + Sbjct: 186 LQLAEHTLADWRQSLDLARRLKTAKQNSGLDIAQAEGQVASAEADLEARTRALAQARNAL 245 Query: 234 STLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G PA + + S QP + + G+P++L+ RPDIR E+ L + A Sbjct: 246 QRLVGAGLPA----NLPEPLSLEAQP-VVTRLPAGLPSELLIRRPDIRQAEQNLVAANAD 300 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P LSL S+ F + WSF P++ P+F G++++ +R AE Sbjct: 301 IGAARAAFFPRLSLTASLGYASPAMGGLFDDGHRVWSFSPQITQPLFQGGRLRAELRLAE 360 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ T+ A +EV + L + + AV ++ + LS + YR G Sbjct: 361 LRKSSAIAEYERTIQTAFREVADGLAGRATYGRQIEAQIRAVASAERRVELSNLRYRAGV 420 Query: 409 YSLLDILDIER---ATAKVEVDLSIAKRQLAKS-YVDLYIAIGSG 449 L++LD +R A+ + +DL RQ A S V LY A+G G Sbjct: 421 EGRLELLDSQRQLYASQQALLDL----RQGAFSNAVALYKALGGG 461 >gi|330825148|ref|YP_004388451.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329310520|gb|AEB84935.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 468 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 105/413 (25%), Positives = 199/413 (48%), Gaps = 13/413 (3%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-H 106 D +WW+ D L LV ALQ + ++ A + + A + PS AS S Sbjct: 48 DLTQWWQQLGDAQLTGLVTQALQAHTSVRSARAAVEQTRAQRDVQAAGMLPSLDASGSAQ 107 Query: 107 RFIPNLKTNSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 R N T ++ QL D+ W+ DLFG+ + + A+L +A A V A++ + +++ + Sbjct: 108 RSRSNGATGNSFQLGLDASWEPDLFGRIASGVRAGEADLLAAEAGVAAAQVALAAEVAVN 167 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R ++R+ IA L ++ +++ + G S ++ + ++ + +P L+ Sbjct: 168 YISLRSQQQRLQIAESNLAAQRETAQITGWRVQAGLASAVAEQQARTIVEQTAAQLPALQ 227 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H ++ L G P + ++ P + + PAD +R RPD+R E Sbjct: 228 AGMAQARHALAVLTGQPPAALDQALA--ASAPVPQAPAELALAFPADTLRQRPDVRQAEL 285 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + ++ A++ PSL L G++ AL+ G T S + LP+FD G + Sbjct: 286 GVRAAWERVAQAEAQRLPSLRLGGTLGLKALSLGALTGGGATAASLLASVSLPVFDGGAL 345 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E++ ++ + ++ VL A+K+VE+AL ++ D++ + +L+ A E + L+ Sbjct: 346 RAQVRAQEAALEQARVGYEAAVLGALKDVEDALVALQGDRERLARLEAAAEAAGNAALLA 405 Query: 401 MINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G +LD +R TA+ V ++A + ++V LY A+G G+ Sbjct: 406 QHQYASGLVDFQTVLDTQRTLLTAQDGVAGTVAS--ASTNHVRLYKALGGGWQ 456 >gi|104779450|ref|YP_605948.1| efflux transporter, outer membrane protein [Pseudomonas entomophila L48] gi|95108437|emb|CAK13131.1| putative efflux transporter, outer membrane protein [Pseudomonas entomophila L48] Length = 472 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/416 (25%), Positives = 189/416 (45%), Gaps = 22/416 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTI-------------LQATERINAAKENILSVRADLFP 98 WW+ + D L+ LV+ AL N + ++ E + + L Sbjct: 56 WWQLYQDPRLDTLVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKAGAQRLQE 115 Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 S A + +P + + + ++ DL+G +R E++ AN D+ A D A++ ++ Sbjct: 116 SGEAFLLPEKVP-VANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLV 174 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ +Y E IA + LDL +++++L+ G + + + + + KS+ + Sbjct: 175 ADVVRAYTQVCSANEEYHIARESLDLQEQSVQLTQRLRDAGRGDETQVTRSQTQFKSLRA 234 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++P + ++ ++ LL P + + Q IP+ G A L++ RPD Sbjct: 235 ELPRFKAEREAGLYTLAALLAKPVEQLPAGTADCAELPQLAQLIPVGDG--AALLKRRPD 292 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 +R E++LA + A IG+A LYP +S+ G+I L + P N W FGP++ I Sbjct: 293 VRQAERQLAAATAYIGVATGALYPDISIGAQVGTIGLLENLGEPSTN-RWGFGPQISWNI 351 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 G ++ IR AE+S Q + VLNAI+E + L + L A K Sbjct: 352 PTNG-TRARIREAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALADAERSAK 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S + + Y+ GR S L L R V L+ A Q+A + +++A+G G+ Sbjct: 411 ESADQTHLRYQVGRESFLADLQATRTYTDVRSQLAAANSQVAMGQIGVFLALGGGW 466 >gi|51594845|ref|YP_069036.1| OMF family outer membrane multidrug efflux lipoprotein [Yersinia pseudotuberculosis IP 32953] gi|153949331|ref|YP_001402538.1| outer membrane protein oprM [Yersinia pseudotuberculosis IP 31758] gi|170025932|ref|YP_001722437.1| RND efflux system outer membrane lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186893854|ref|YP_001870966.1| RND efflux system outer membrane lipoprotein [Yersinia pseudotuberculosis PB1/+] gi|51588127|emb|CAH19733.1| probable outer membrane multidrug efflux lipoprotein, OMF family [Yersinia pseudotuberculosis IP 32953] gi|152960826|gb|ABS48287.1| outer membrane protein oprM [Yersinia pseudotuberculosis IP 31758] gi|169752466|gb|ACA69984.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia pseudotuberculosis YPIII] gi|186696880|gb|ACC87509.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia pseudotuberculosis PB1/+] Length = 468 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 105/458 (22%), Positives = 214/458 (46%), Gaps = 29/458 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC ++ P+Y +P P+ T +S +S +I W E+ D L +++ +AL+ Sbjct: 12 ALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADI---PWQETIIDPKLRQVIALALE 68 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD--------- 121 N + QA I AA+ RA P+ A ++ L S G + Sbjct: 69 SNRDLRQAIADIEAARAQYGVQRAAQLPTVNAGVNGSRGRGLSDTSDGNNNTAISQSYGA 128 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERI 174 S +++DLFG++ + S A ++ A + AK + +I+ +++ + ++ Sbjct: 129 QASVSAFELDLFGKKSSL--SHAEFETYLATEEAAKTTRITLIADTATAWVTLAADQNQL 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L +++++L+ L+ G S++ + +E +S +D+ + + + + + Sbjct: 187 LLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQDKNALD 246 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P H + ++ P + + +G+ +D++ NRPD+ E KL + A IG Sbjct: 247 LLVGQPVAA--HLLPVAASTL-PEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANANIGA 303 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L S ++ + WS P + LPIFD G ++ + +++ Sbjct: 304 ARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQAQK 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ + A KEV +AL ++ Q V ++S+ L+ Y+QG + Sbjct: 364 TGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGIDTY 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R + L ++ + + LY +G G Sbjct: 424 LNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGG 461 >gi|330950119|gb|EGH50379.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 486 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/476 (23%), Positives = 220/476 (46%), Gaps = 42/476 (8%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPEAPV-AAQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S + + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRVPADQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TGQ S +++DLFG+ R + E +L ++ ++++++ + + Sbjct: 122 -TGQSGITSSYSASLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + KE + + L Y+++ L+ G +S L L + ++S + + + Sbjct: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + +++ LLG PA+ L ++ + G+P+DL++ RPD Sbjct: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPD 290 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL S + F G + W F P + +PI Sbjct: 291 ILEAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPI 350 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G +++++ ++ + +++ + A +EV + L S + + + V ++ Sbjct: 351 FNAGNLRASLDSSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQ 410 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 411 DYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 466 >gi|326386460|ref|ZP_08208083.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326209121|gb|EGD59915.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 476 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 211/465 (45%), Gaps = 39/465 (8%) Query: 15 LAGCTVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKI 67 LAGC +GP Y P + F + + DTL +WW ++D L+KL + Sbjct: 22 LAGCVMGPNYHVPEKAAASQAVAKAPFHEAPTTPGVTADTLPPRWWHMYDDPVLDKLEED 81 Query: 68 ALQQN---------LTILQATERINAAKE------NILSVRADLFPSSYASISHRFIPN- 111 AL N L QA R+ + ++++ RA L S+ PN Sbjct: 82 ALAANTELRIAGANLARAQAFTRVTEGQGELEYSVDVMAERARLSGESF------LRPNS 135 Query: 112 LKTNSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + S G++ ++++DLFG+ +R IE++ A+ ++ A + K+ V +++ +YI Sbjct: 136 VPVASIGEVKGAVNYQLDLFGRIKRSIEAARADEQASAAVIGAVKVTVAAEVAKAYIGQC 195 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E +A + +++ + +E++ G +S + + E + +S +P R Sbjct: 196 AAREAQELAERQVEINEHALEVAKRINDAGRSSVGGVTEAEHRLALAKSAVPIRRARARA 255 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ ++ LLG ++ ++ + P + P+ IG A LI RPD+R E++LA + Sbjct: 256 ELYRLAFLLGRAPADYPREAER--CHEIPKIERPLPIGDGAALIARRPDVRVAERELASA 313 Query: 289 VAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A++G+A + LYP +S+ G+ D N W G L+ I K + ++ +R Sbjct: 314 TARVGVATASLYPDISIGVSGGAFGFIKDLGTAPANM-WGVGGLLHWTIPTKSE-RARVR 371 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + A + VL+A++E E AL ED + A+ ++ + Sbjct: 372 AANAEADAALAHFDGVVLDALRETETALAMYAEDHNRAVSIADALVAAREEAKEARELRE 431 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 GR LL + ++ E+ S + +A V L++A+G G+ Sbjct: 432 GGRTPLLSAIGGQQTEIAAEIADSDIREAVALDQVGLFLALGGGW 476 >gi|71909438|ref|YP_287025.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] gi|71849059|gb|AAZ48555.1| RND efflux system, outer membrane lipoprotein, NodT [Dechloromonas aromatica RCB] Length = 504 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 123/471 (26%), Positives = 219/471 (46%), Gaps = 49/471 (10%) Query: 17 GCTVGPEYTKP--HMPLL----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC++ P Y P P P ++ NI +WW++F D +L+ L A Sbjct: 42 GCSLAPSYQPPVVDTPAAFKEAPANSQWKTAEPAENIPRGEWWKAFADPTLDDLEARAAA 101 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---NLKTNSTGQLDSDW 124 N + R+ A+ + R+ LFP R P L ++ L + W Sbjct: 102 ANQDLKAGAARLAQARALQQNARSALFPQIGIGAGPTRQRPSPASQGLAADADTSLSTLW 161 Query: 125 KI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + DLFG+ ++++ A + A +L + + + +Y R + Sbjct: 162 RAQGTVAYEADLFGRVSSSVDAAKATTEQREALFHSLQLAIQADVAQAYFSLRELDAMSA 221 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + + L +++ +L +F +G S+L L + E+ S S+ + + + H+++ Sbjct: 222 LYAETVTLREQSTQLFQRRFDEGDISELELARSRTELASARSEALGIARQRAVAEHSLAI 281 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG F K N +L +P G+P+ L+ RPDI E+ +A + A+IG A Sbjct: 282 LLGQAPAAF-ALPAKPLNRV--SLQVPA--GLPSALLERRPDIAAAERAMAAANARIGTA 336 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDKGKIKSNIRR 346 ++ +P LSL G AL ++++ G WS G L LP+FD G ++ + + Sbjct: 337 RAAFFPRLSLTG--ALGYESAELGDLFKWSSRAFVMGPLVGTLLSLPVFDGGARQAGVDQ 394 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ---HAVELHKKSMSLSMIN 403 A ++ E+ +Q+TVL A KEVE+ L + + +V + Q AV ++S LS I Sbjct: 395 AHAAYAEEAANYQQTVLKAFKEVEDNLAHL---RLLVDQTQAQDEAVSSARRSARLSQIQ 451 Query: 404 YRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR+G S L+++D +R+ +V V L + + A++ V+L AIG G++ Sbjct: 452 YREGSVSHLNVIDADRSVLQQQRVSVQL---EAEQARATVNLIRAIGGGWS 499 >gi|309779191|ref|ZP_07673954.1| ABC-type export system, outer membrane channel protein [Ralstonia sp. 5_7_47FAA] gi|308921995|gb|EFP67629.1| ABC-type export system, outer membrane channel protein [Ralstonia sp. 5_7_47FAA] Length = 508 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 106/482 (21%), Positives = 222/482 (46%), Gaps = 48/482 (9%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDTL--KW 52 ++ +L+ C VGP++ P P LP Q S G ++ ++ + +W Sbjct: 22 LAVACLLVTACAVGPDFKVPDAPKVSGYTPQPLPEQTSSAATQGGEAQRFVSGMKVSDQW 81 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-- 107 W++F LNK ++ A + T+ A + A++ + + FP +Y R Sbjct: 82 WKTFQSDKLNKTIENAFAASPTLSAAQAALRIAQQQTSAQQGAFFPLVQGAYQGARKRDA 141 Query: 108 ---FIPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 P+L +N+ T Q+ + D+FG RR +ES A D+ Y Q++ A L + Sbjct: 142 VGTIAPSLTSNAEIYSLHTAQVTVSYAPDVFGLNRRQVESLKAAEDAQYFQLEAAHLTLA 201 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ + + + +I +I+ + + + +F GA + L + ++ + E Sbjct: 202 TNIVAAAVQEASLRAQIDAQKRIVAINTQLVGNLRKQFRLGAVTGLDVAAAQSALAQAEQ 261 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRN 274 +P L+K + ++ L G + + ++ F + +P + + +P+DL+R Sbjct: 262 ALPNLQKQLAVQRDLLAALAGKLPGDGI------ADTFTFADFTLPQELPLSLPSDLVRQ 315 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E++L + A++G+A +++ P L+L+ G A F N WS + Sbjct: 316 RPDVRAAEEQLHAATAQVGVAIANMLPQLTLSATRGGTASQFSQMFQQGNVFWSLVGGVA 375 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 FD G + + R A++ + ++ TV++A + V + L +++ D ++ A + Sbjct: 376 QTFFDGGTLLAKKRAADAGVDQAEAQYRGTVISAFQNVADTLHALDADADVLKAALKAEQ 435 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGS 448 + ++ ++ G+ ++L +L E+A + + +IA R A + D L+ A+G Sbjct: 436 AARTTLDITDKQRAIGQVNILAVLSAEQAY-QTALQATIAAR--ANRFSDTAALFQALGG 492 Query: 449 GY 450 G+ Sbjct: 493 GW 494 >gi|237713205|ref|ZP_04543686.1| outer membrane efflux protein oprM [Bacteroides sp. D1] gi|262406656|ref|ZP_06083205.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_22] gi|229446672|gb|EEO52463.1| outer membrane efflux protein oprM [Bacteroides sp. D1] gi|262355359|gb|EEZ04450.1| outer membrane efflux protein oprM [Bacteroides sp. 2_1_22] Length = 465 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 199/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF D L+ L+ +A+ +N ++ A RI AA+ N+ R++ PS + R Sbjct: 53 WWKSFQDAKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFLPSIGLNAGWTRQET 112 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 113 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + + ++ IP Sbjct: 173 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYNTKASIP 232 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S P+ PI +G+P DL+ RPD+R Sbjct: 233 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SGGTLPDYMEPIGVGLPVDLLLRRPDVRG 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 291 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLSW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ K + L+ Sbjct: 346 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNGYRNSIKQIVALREVRNQ 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 406 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 463 >gi|145298426|ref|YP_001141267.1| outer membrane protein OprM [Aeromonas salmonicida subsp. salmonicida A449] gi|142851198|gb|ABO89519.1| outer membrane protein OprM [Aeromonas salmonicida subsp. salmonicida A449] Length = 468 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 113/471 (23%), Positives = 219/471 (46%), Gaps = 34/471 (7%) Query: 3 ILRAIFSLFIVLLAG-CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + + + +L + LL G C++ P+Y +P LP S +++ W + F D +L Sbjct: 1 MTKTLVALSVTLLLGACSMAPDYQRPE---LPQGASWQSNETAGEAAVSPWQQQFLDPTL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTG 118 +L+ AL+ N + A + A + RA P+ A+ S + +L + G Sbjct: 58 QRLIDTALENNRDLRIAALNVEAYEARYRIQRAAQLPTLAANGSGTRQQGSDDLSSTGQG 117 Query: 119 QLDSDW---------KIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + S + ++DLFG+ + +E+ LA +++ + ++ +I+ + +Y Sbjct: 118 TISSQYDANLGITAYELDLFGRIQSLKDQALETYLAEIETRRS----TQIALIASVANAY 173 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E ++++ L +++ L+ K+ GA S++ L + ++S + ++ Sbjct: 174 LTLLADQELLALSEATLSTEQESYGLTEHKYRLGAASEMELAQGRTALESARVSLAQYQR 233 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + + ++ LLG + + Q I +G P+ L++ RPDI E Sbjct: 234 QVKQDRNGLALLLGTQ----VPVLDSQPVTLAEVKLAAIPVGAPSSLLQQRPDILAAEHS 289 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +PS+SL + A T N F G WSF P+ LPIFD GK Sbjct: 290 LKAANANIGAARAAFFPSISLTAT-AGTASNQLSGLFDGGTGTWSFIPQSNLPIFDGGKR 348 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +++ AE S ++ ++++++ A KEV + L + + ++ + Q VE ++ L+ Sbjct: 349 IADLDVAEVSTRQAVASYEKSIQTAFKEVADTLGAQADYQQQLRAQQALVEANQTYFKLA 408 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y QG S L LD +R+ + L + + V LY AIG G+ Sbjct: 409 EFRYEQGVDSYLTRLDAQRSLFSAKQGLISTRLAQLTNQVALYKAIGGGWQ 459 >gi|253995381|ref|YP_003047445.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera mobilis JLW8] gi|253982060|gb|ACT46918.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera mobilis JLW8] Length = 460 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 219/468 (46%), Gaps = 41/468 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESFNDTSLNK 63 A+ +L + + + C++ PEY +P P+ P + G N + L W F D L K Sbjct: 8 AVVALALAI-SSCSLIPEYLRPAAPV-PESYP-GQPANDAVTEAPPLTWQSYFPDADLQK 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNL 112 L+++ LQ N + A RI+ AK AD P+ + S S F L Sbjct: 65 LIQVGLQHNRDLKTAVLRIDEAKALYGIQNADRLPTIQGNLNYDRNKTVFSSSQAFEAEL 124 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 G SD++ID+FG+ + + +++L + + +++++ Y++ Sbjct: 125 FKAGVG--ISDFEIDVFGRVKSLSQAALEQYLAITENQQAIQATLVTEIATQYVNLLTIH 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ +A Q LD K+ ++ + +F G L L + +++ +++ ++ + Sbjct: 183 AQLKLAEQTLDDRKQILQRTQRRFDAGIDQVLDLKAAQIQVEQVQAQHAQWQRQLVTTQN 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN---IGIPADLIRNRPDIRYQEKKLADS 288 + LLG + Q+ +P + + IG+P+ L+ R DIR E +L + Sbjct: 243 ALYLLLGESS-------QRTILTIKPLEDLKVGEAPIGMPSSLLTRRADIRAAEHQLKSA 295 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A IG A++ YP L L ++ L + S G N +W+F P+L +PIF+ G+ K+N Sbjct: 296 NANIGGARAAFYPRLQLTTNVGLVNSEFTKLFSDTGSN-YWAFSPQLIIPIFNYGRNKAN 354 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLS 400 + A++ + + +++T+ A +EV + L+ +I E+ T+L +L + L Sbjct: 355 LNLADARQHIEVVNYEKTIQTAFREVMDVLSAREAIAEESSARTRLS---DLESSRLQLV 411 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 QG + L++LD +R+ + + ++ + ++ V+LY A+G Sbjct: 412 KRKLDQGLVTYLELLDAQRSVLDAQSQVLQTRQLVLQNQVNLYKALGG 459 >gi|294643450|ref|ZP_06721264.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294808636|ref|ZP_06767373.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|292641198|gb|EFF59402.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294444162|gb|EFG12892.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] Length = 454 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 199/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF D L+ L+ +A+ +N ++ A RI AA+ N+ R++ PS + R Sbjct: 42 WWKSFQDAKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFLPSIGLNAGWTRQET 101 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 102 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 161 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + + ++ IP Sbjct: 162 ASAYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYNTKASIP 221 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S P+ PI +G+P DL+ RPD+R Sbjct: 222 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SGGTLPDYMEPIGVGLPVDLLLRRPDVRG 279 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 280 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLSW 334 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ K + L+ Sbjct: 335 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNGYRNSIKQIVALREVRNQ 394 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 395 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 452 >gi|86141608|ref|ZP_01060154.1| multidrug resistance protein, FusA/NodT family protein [Leeuwenhoekiella blandensis MED217] gi|85832167|gb|EAQ50622.1| multidrug resistance protein, FusA/NodT family protein [Leeuwenhoekiella blandensis MED217] Length = 507 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 109/482 (22%), Positives = 227/482 (47%), Gaps = 54/482 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNS-------KNLINIDTL-----KWWESFNDTSLNK 63 C VG +Y +P + +F + +S + I+ D+L W E D++L Sbjct: 32 GSCKVGQKYERPQFDDVSEEFYVKDSVLNDSLAEAAISRDSLMMSHIPWREFIEDSTLIS 91 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS----------------ISHR 107 L+ AL N+ + +A ++ E + +A+ PS A+ S+R Sbjct: 92 LIDTALVNNINLQKAMRNMDIGMEYLSQSKANFLPSVNATPAGFRREYYSENYNNYGSNR 151 Query: 108 FIPNLKTNSTGQL-----------DSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLN 155 N N G L +DW++D++G+ R E++ A+ + + + Sbjct: 152 ARRNHGENVPGSLYTERLEYTTALQADWELDIWGKLRWQKEAARADFMKSQEFKKVVQTE 211 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I+++ +Y + K ++ +A + L + L++ G T+ L+L + +++ Sbjct: 212 LIAEVASTYYNLIMLKSQVEVAQKNYALNDSTYNIVKLQYDAGETTSLALQQTKSQQLKA 271 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 +S IP LE+++ + + ++ LLG FQ G+P +LI+NR Sbjct: 272 QSLIPQLERAYTVQENKLNRLLGRSPRPIELNADLDDIEFQKKY----KTGVPLELIKNR 327 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSF-GPKLY 331 PD+ E +L A+ G+A++ YPSLS+ + L +N F ++ ++ ++ Sbjct: 328 PDVAMAEYELIAQNARTGVAEALKYPSLSIGAGLGLNSFQLENFFDPVSSAFTLLNGSIF 387 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTKLQH 388 PIF+ K+K+N R A S + + +++ ++ A+++V N+LT IN E+ KI Q Sbjct: 388 QPIFNNRKLKTNYRVALSEREIAQLEFKDNLIGAVEDVSNSLTRINKLTEEYKIA---QE 444 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E+ +K + + + ++ G + L+++ + + E++ K+Q+ + ++LY ++G Sbjct: 445 RIEVTQKGLKDAALLFKGGFANYLEVITAQSDALESELNEINTKKQILIANIELYRSLGG 504 Query: 449 GY 450 G+ Sbjct: 505 GW 506 >gi|226941160|ref|YP_002796234.1| outer membrane transport protein involved in copper (Silver) tolerance [Laribacter hongkongensis HLHK9] gi|226716087|gb|ACO75225.1| Putative outer membrane transport protein involved in copper (Silver) tolerance [Laribacter hongkongensis HLHK9] Length = 484 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 118/467 (25%), Positives = 203/467 (43%), Gaps = 39/467 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +L + L +LAGC V P +LP + + + +L W E F D L Sbjct: 13 GLLCMVVLLSAGMLAGCAV-PTGRVTADAVLPVHYPGVTADENASAASLPWQEVFRDPHL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG 118 L++ AL N + AT R+ A+ A P + A+ R +L Sbjct: 72 QALIRQALAYNRDLQLATARVAEARALYGIQEAGSRPGLELNTAAARGRTPADLSITRQA 131 Query: 119 QLDSDW---------KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP----SY 164 Q+ ++ +ID +G+ + + E++LA Y D A+ + LI ++ Sbjct: 132 QVAGEYSVNAGLIAYEIDFWGRVKSLREAALAQ----YLATDEARQAFETSLIALVANTH 187 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + A ERI +A + L +++ + + GA+S L L ++E + S++ LE+ Sbjct: 188 LTALELDERIRLARKTLASREESWRIMQKRSETGASSDLELREVETLVYGARSELALLER 247 Query: 225 SFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 I L+G+ P L Q L P+ G+P+ L+ NRPD+R Sbjct: 248 QRAQTGALIRQLVGHAPVDAPPARPLD---------QQELTRPLPAGLPSALLTNRPDLR 298 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFD 336 E +L S A I A++ +PS+ L G+ + F G + W+F P L +P+FD Sbjct: 299 AAELRLRASQASIRAARAAFFPSIVLTGTAGTASAELGSLFAGGSGSWNFMPVLRMPLFD 358 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ ++N+ A + ++ + A +EV +AL + + V + Q + + Sbjct: 359 GGRTQANLDLATARQLVAVADYESVIQTAFREVADALAASHWLGVQVVEQQSRLRAESER 418 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 L+ + Y +G S L++LD ERA E L +R + VDLY Sbjct: 419 TRLARLRYERGVSSYLNVLDAERALFVAEQTLVQVQRAQMAATVDLY 465 >gi|148553375|ref|YP_001260957.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148498565|gb|ABQ66819.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 459 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/451 (24%), Positives = 199/451 (44%), Gaps = 28/451 (6%) Query: 16 AGCTVGPEYTKP-HMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC G + KP +P + P + + + D WW F D +L LV AL N Sbjct: 13 GGCAAG--HIKPVAVPPVDAPAAWRTAAPLSAVERD---WWTGFGDPALTALVDRALANN 67 Query: 73 LTILQATERINAAKENIL--------SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDW 124 I A R+ A+ N+ ++ A+L SIS ++ + Q+ + + Sbjct: 68 SDIGIAAGRVREARANLAAARATLLPTLDANLTGGRTRSISPFGTAEVQNAAQPQVQAAY 127 Query: 125 KIDLFGQRRHIESSLANLDSAY----AQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +IDLFG R + S A SAY A D +L + S Y+ R+ IA Sbjct: 128 EIDLFG-RLADQRSAAR--SAYLASEAARDAVRLAIASATASGYVTLLGLDTRLDIARHT 184 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L +++++ + + G + KL L + +AE + + +P +E + H ++ L G Sbjct: 185 LAARGTSLKIARSRVSNGYSPKLELQQAQAEYDATAAIVPQIELAVARTEHGLNLLTG-D 243 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + + QP P+ G+P++L+R RPDI E++LA + + + +A+ Sbjct: 244 TPQAIGRGATLATLAQP----PLAGGLPSELLRRRPDIAQAERQLAAADSSLAVARKRFL 299 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 P L L+ S + T W G + PIF G++ + A + +++ Sbjct: 300 PQLRLSASAGAAFSSLLDDPITLWQVGGSILAPIFQGGRLTAQAEAAAGQRDQAAFAYRK 359 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 VL +EVE+AL S+ + V H + +++ L+ YR+G L+ LD +R Sbjct: 360 AVLTGFREVEDALASVRRIDEQVALAIHQRDTLAEALRLATNRYREGYSPYLEQLDAQRQ 419 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E++L+ + + + LY A+G G+ Sbjct: 420 LLAAELNLAQLQSDGFAARIQLYQALGGGWT 450 >gi|260600072|ref|YP_003212810.1| copper/silver efflux system outer membrane protein CusC [Cronobacter turicensis z3032] gi|260219419|emb|CBA34771.1| Probable outer membrane lipoprotein silC [Cronobacter turicensis z3032] Length = 498 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/462 (23%), Positives = 225/462 (48%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ ++ ++ + W F D + +L+ Sbjct: 49 IFILAGCVSLAPEYQRPAAPV-PQQFSLSHNSLTPAVNGYQDTGWRNFFVDPQVTRLIGE 107 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLD 121 AL N + A ++ A+ AD +P AS + LK + +L+ Sbjct: 108 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDARLE 167 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 168 LSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIAR 225 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 226 ETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 285 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ + + + PNL + ++ RPDI E +L + A IG Sbjct: 286 TYRALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGA 337 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Sbjct: 338 ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ 397 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + +A K+V + L + + + Q ++ + ++ + Y G S Sbjct: 398 QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSY 457 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 458 IEVLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 496 >gi|270156981|ref|ZP_06185638.1| RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|289164601|ref|YP_003454739.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269989006|gb|EEZ95260.1| RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|288857774|emb|CBJ11618.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 536 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 120/500 (24%), Positives = 225/500 (45%), Gaps = 77/500 (15%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------------NIDTLKWW 53 F LF LL C VGP Y P + ++P QF K +I +I+ +WW Sbjct: 42 FGLF--LLTSCMVGPNYVPPKL-VVPPQFKEAKGKKVIGAKRKNWKPIKPQDDIERGEWW 98 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------------- 98 + FND LN+L N +I+ A + + + RA L+P Sbjct: 99 KIFNDPVLNELEDQLYHYNQSIVSAEANFSQSLAIVDQARASLYPTLIGAGSLFRQRQAG 158 Query: 99 ----------SSYASISHRFIP--NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSA 145 SS + + IP ++ T TG L+++W+ D++G RR IE++L+ +S Sbjct: 159 GSTTIISSTGSSEGTATTNIIPTASVTTIYTGFLNANWEPDIWGVVRRTIEANLSLAESN 218 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 A + + +L+ L Y + R + ++ + Y+K ++ ++ G S+ + Sbjct: 219 EALIGVTRLSAQGALAQYYFELRTLDKSQKYLNETVIAYQKLLQFIRNQYASGVASRADV 278 Query: 206 VKLEAEIKSIESDI---PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 V+ + ++++ ++ L + H I+ L+G P F ++ +P P Sbjct: 279 VQAQIQLETAQASAINNGILRGQYE---HAIAVLMGRPPAYF--SLKPAIVRLKPP---P 330 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 I + +P++ + RPDI E+ + + A IG+A + +P+L+L G+ S G++ Sbjct: 331 IPLQVPSEWLERRPDIAQAERLVQQASALIGVAIAAYFPTLTLTGT------TSAAGHSF 384 Query: 323 H---------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 H WS G ++ IFD G + +R + + Q +++ VLNA ++VE+ L Sbjct: 385 HELIHKPSISWSAGMQIAETIFDGGYRAAGVRATKEQYRAQVANYRQVVLNAFQDVEDNL 444 Query: 374 TSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSI 430 ++ + + +V Q A ++ ++ L+ Y+ G +IL + A A + I Sbjct: 445 IALRLLKQQSMVQDKQTADAIY--ALKLTKNQYKAGTLPYANILTAQISALAAEQAATQI 502 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 Q+A S V L ++G G+ Sbjct: 503 DGLQMA-SAVGLIKSLGGGW 521 >gi|254481379|ref|ZP_05094624.1| efflux transporter, outer membrane factor lipoprotein, NodT family [marine gamma proteobacterium HTCC2148] gi|214038542|gb|EEB79204.1| efflux transporter, outer membrane factor lipoprotein, NodT family [marine gamma proteobacterium HTCC2148] Length = 506 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 115/459 (25%), Positives = 216/459 (47%), Gaps = 30/459 (6%) Query: 18 CT-VGPEYTKPHMPLLPTQ----FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 CT +GP+Y +P + L + S D WW++FNDT+LN L+ A +N Sbjct: 20 CTNLGPDYQEPEVSWLQDWETDLYGQVLSSPTEEEDLQFWWQAFNDTTLNGLIDTARTEN 79 Query: 73 ----------------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 L I ++ + N R D +P+ S +L + + Sbjct: 80 PTLRLAGLAVLESRALLGIATGSQYPQVQQANGSWARVDNWPTEGRSSGDH--SDLNSYN 137 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G + W++D +G+ RR IES+ A ++ A++ + +++ +Y +I Sbjct: 138 VG-FNVGWEMDFWGRYRRSIESADAAFFASLTNQQNAQVLMAAQVAQAYYSYLTIANQIE 196 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I+ + +L ++++E+++ F G +++L + + + + S IP LE S R + +S Sbjct: 197 ISKENAELQERSLEITNNLFESGQSAELDVQQARTQYLATLSSIPNLEISLRQVENALSV 256 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + ++ + P L P+ I PA L+ RPD+R +A A+IG+ Sbjct: 257 LLGRSPGD-MPELEGVAQGL-PTLN-PVFIDAFPAALLMRRPDVRTAAWSVAAQSAQIGV 313 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 AK+DLYPS+SL G+I + ++ +T GP +F+ +I++++R ++ Q+ Sbjct: 314 AKADLYPSVSLFGTIGWSGNSLNATTDTLSTGIGPSFSWNLFNYDRIENSVRVQDARLQQ 373 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +Q TVL A E+++A S+ + K+ L A++ +S+ LS Y++G Sbjct: 374 AIEGYQLTVLAAASEIDDAAISVVKTKEQQLLLAEALKAADRSLVLSTKRYQEGYSDFQR 433 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +L ++A A + + Y A+G G+ P Sbjct: 434 VLSAQQARAARSSAYVANQGAHISGVIAFYKALGGGWQP 472 >gi|254000183|ref|YP_003052246.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253986862|gb|ACT51719.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 474 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 40/466 (8%) Query: 13 VLLAGCTVG--PEYTKPHMP-------LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++LAGC+ PE +P L + GN + +ID WW FNDT LN Sbjct: 15 LVLAGCSTAKPPEQINLQLPNQYRETAQLDGAWQAGNPAD--HIDRGAWWTVFNDTELNN 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASISHRFIPNLKTNST--GQ 119 L++ A + + T+ A R+ A+ N V AD + + + P+ N+ Q Sbjct: 73 LIEAATESSPTLAIALARVKEARANAGVVDADRKFQLNGGVGPTRQRDPDTPANTEWRAQ 132 Query: 120 LDSDWKIDLFGQRRHIESSLANLDS-----AYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +++ +++DL G R +S A LD+ AY V +A + + + Y R + Sbjct: 133 VNASYEVDLIG-RLSDQSRAARLDAQGQEAAYRSVLLA---LQADIAQQYFTLRALDSEL 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I + +DL ++ + + ++ G +L L K + E+ +++++ ++ ++ H ++ Sbjct: 189 EILRKTIDLRQEELRMVQRRYDLGDIGELDLAKAKTELATVQAEQESVVRNRAQQDHALA 248 Query: 235 TLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG EF L Q + Q + +G+P+ L+ RPDI ++ LA + A++G Sbjct: 249 ILLGKTPAEFTLAAAPLQLSVVQ------VPVGLPSQLLERRPDIAQAQRALAAASARVG 302 Query: 294 IAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP----KLYLPIFDKGKIKSNIRR 346 AK+ +P L L G+ + F + W GP L LPI D G+ K+N+ R Sbjct: 303 AAKAAFFPRLVLTGTGGYESNELHELFKWSSRSWLLGPLVGTALTLPILDGGRNKANLSR 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ + + +++ VL +EVEN L+ + + + + A+ + L+ Y+ Sbjct: 363 ADAVYEREVANYRQQVLVGFQEVENNLSGLRTLDRQIDYQRQAIASASVAERLANTRYKN 422 Query: 407 GRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S +++D +R + V+ ++ A ++ S V L A+G G++ Sbjct: 423 GSASYFEVIDAQRTSLSVQRAEVQTAGLRMLTS-VGLIRALGGGWS 467 >gi|325921780|ref|ZP_08183601.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325547741|gb|EGD18774.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 501 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/469 (23%), Positives = 206/469 (43%), Gaps = 33/469 (7%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFS------IGNSKNLI---------NIDTLKWWESFND 58 +L+GCT+ P Y +P P+ P +F+ N+ ++ +I + W + F D Sbjct: 16 VLSGCTLMPRYARPDAPV-PDRFAGTDITVASNATEVVANTGTDEATDIANIGWRQVFTD 74 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--------ISHRFIP 110 +L +++ +AL+ N + A I A+ RA L PS + S IP Sbjct: 75 PALQQVIALALENNRDLRVAALNIEVARAQYRVERAALLPSVQGTGTSNNARTPSELAIP 134 Query: 111 N----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +T S S +++DLFG+ R + E +L S +++++++ +Y+ Sbjct: 135 GQPQVFRTYSANIGISAYELDLFGRVRSLKEQALQQFLSTAEARRSTHISLVAEVATAYL 194 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ + +A L + L F G S+L+L + + +++ D+ Sbjct: 195 TLAADQQLLQLAQSTLSSQSDSYRLQQRSFELGVASQLTLRQAQTTVETARVDVERYTAQ 254 Query: 226 FRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + + L+G + L + N+ + G+P+ L++ RPDI E+ Sbjct: 255 VAQDRNALVLLVGTQVPVDLLPRALPDGASVDGNVLAGVPAGLPSQLLQRRPDILEAERN 314 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +PS+SL S + N F WSF P L LPIF+ G+ + Sbjct: 315 LRAANANIGAARAAFFPSISLTASQGSSTSSLSNLFDSGTRAWSFVPTLTLPIFNAGRNR 374 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A+++ + +++ + +A +EV +AL + + Q V+ S LS Sbjct: 375 ANLDMAKANRAIEVAQYEKAIQSAFREVSDALAQRETLGRQLQAQQALVDATADSYRLSQ 434 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +G S L LD +R+ + L + + Y A+G G+ Sbjct: 435 ARFERGVDSYLQALDAQRSLYSAQQTLIATQLSRFTNLATFYKAMGGGW 483 >gi|189220206|ref|YP_001940846.1| Outer membrane protein [Methylacidiphilum infernorum V4] gi|189187064|gb|ACD84249.1| Outer membrane protein [Methylacidiphilum infernorum V4] Length = 548 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 123/526 (23%), Positives = 239/526 (45%), Gaps = 96/526 (18%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHM--PL--------------------LPTQFSIGNSKNL 44 F +++L+ C VGP+Y +P + PL PT+ + K L Sbjct: 18 FFLPLVLVLSSCAVGPDYHRPAVETPLAFKWGESPGAEKPTTGEEGATPTEEQTASGKRL 77 Query: 45 INIDTLK-----------WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 NI K WW+ F D L++L L N + ++ A+ + Sbjct: 78 ENIRWKKALPQDAIARGEWWKIFKDPLLDQLEAQLLVGNQQLKGIYAQVVEARSLVTQSL 137 Query: 94 ADLFP--SSYASISH-RFIPNLKT------------NSTGQ------------------- 119 ++ FP Y S RF N N++GQ Sbjct: 138 SNFFPHIGFYPFYSRLRFSQNQPFFFLQHPVLAPVFNTSGQQIGFTQFQTGLPIYWNEWA 197 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + ++ D++G+ RR +E++ A+ + A + L + ++L Y R+ ++++ Sbjct: 198 LPLAASYEADIWGRYRRELEAAKASAQATQAAYESLLLTLHAELATDYFSIRYIDAQLAV 257 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-IST 235 ++D+++ N+ L ++ G ++L L + + ++ +++S LE + R + N I+ Sbjct: 258 YRYMIDVFRDNLYLVQSRYDGGLANELDLARAKTDLANLQSQYIGLENT-RAQIENAIAV 316 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-------ADLIRNRPDIRYQEKKLADS 288 LLG PA+ S PN PI+ +P +DL++ RPD+ E+++A + Sbjct: 317 LLGKPAS---------SVKIAPN---PISGSVPVLPEYLPSDLLQRRPDVAQAERQMAAA 364 Query: 289 VAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A +PS++L S+ L T + F G + W+ GP + LPIF+ G++ + ++ Sbjct: 365 NADIGVALGAFFPSVNLLASVGLLSSTIEMLFNGSSRFWTLGPFVSLPIFEGGQLVAGLQ 424 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +A+++ Q +++ VL A +EVENAL ++ + Q V K+ +S++ ++ Sbjct: 425 QAKAAYQAAVANYRQGVLVAFQEVENALAALKILEAQQEAQQRTVAFSKEQFDVSLVRFK 484 Query: 406 QGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGY 450 +G + +++ E+ + ++L I + S V L A+G G+ Sbjct: 485 EGLVNYIEVDTTEQVWLNAQLLNLQILGERFI-STVALIRALGGGW 529 >gi|121595159|ref|YP_987055.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120607239|gb|ABM42979.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 528 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/505 (22%), Positives = 216/505 (42%), Gaps = 77/505 (15%) Query: 17 GCTVGPEYTKPHMPLLPT------QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC + P Y P +P+ T Q + L + + W E D L +V+ AL Sbjct: 21 GCNLAPRYEAPPLPVPDTVASPLPQPQTAGAVALPDGGPMAWQEFVQDARLRTVVEQALA 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL----KTNSTGQLD-- 121 N + A I+ A+ V+AD FP+ A+ + R +L ++N+T Q Sbjct: 81 NNRDLRVAVLAIDKARAQYGVVQADRFPTVNAAGAGNRSRTADDLTAAGRSNTTSQYSAT 140 Query: 122 ---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S ++ID FG+ R + +++L +L++++++I +++ R+ +A Sbjct: 141 LGFSSYEIDFFGRVRSLNDATLQEFLRVAENRRSVQLSLVAEVIGAWLTLDADARRLQLA 200 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L ++ +EL+ GA+S L L + ++ + D + + ++ L+ Sbjct: 201 RETLRTRQQALELTQRSHELGASSGLVLAQAQSAADTARVDAAAFVSQLARSRNALALLV 260 Query: 238 GYP-----------ATEFLHYMQKQSNNFQPNLYIPINIG-------------------- 266 G P E + + P G Sbjct: 261 GSPVPPALLPASVATVETAMPVTAMAGPATPATQPAPGTGTADSPAPRSPVPALADPAAP 320 Query: 267 ----------IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS 316 +P+ ++ RPD+R E L + A IG A++ +PS++L S+ T N+ Sbjct: 321 ATALLAVPADVPSSVLLRRPDVRAAEHALQGATANIGAARAAFFPSITLTASVG-TASNA 379 Query: 317 ----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 F G N W+F P++ LPIFD G+ ++N+R AE + +++ + A +EV +A Sbjct: 380 LSGLFEGGNGTWAFAPQIRLPIFDAGRNQANLRVAEVTRDTAVAQYEKAIQTAFREVSDA 439 Query: 373 LTSINEDKKIVTKLQHA---VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEV 426 L E + +LQ V+ ++++ LS +R G + L +LD +R A + ++ Sbjct: 440 LA---ERATLTERLQAQGSLVQATQRTLQLSDARFRLGADNYLAVLDAQRTLYAAQQAQI 496 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 L +A++ + V LY +G + Sbjct: 497 TLQLAEQ---VNRVTLYKVLGGAWT 518 >gi|207727646|ref|YP_002256040.1| outer membrane channel lipoprotein [Ralstonia solanacearum MolK2] gi|206590885|emb|CAQ56497.1| outer membrane channel lipoprotein [Ralstonia solanacearum MolK2] Length = 478 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 97/437 (22%), Positives = 196/437 (44%), Gaps = 38/437 (8%) Query: 16 AGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDT-LKWWESFNDTSL 61 GC VGP++ P P LP + G ++ L + WW F +L Sbjct: 16 GGCAVGPDFKAPAPPAASGYTAQPLPAATASAPVPGGEAQRLAEANVPADWWHLFQSPAL 75 Query: 62 NKLVKIALQQNLTIL-----------QATERINAA----KENILSVRADLFPSSYASISH 106 + LV AL+ + T+ +A + A + +VR + P ++ + Sbjct: 76 DALVDEALRASPTVAQAAARLRQAQAEAEAQFGAVLPSVDGTVSAVRQQVNPEAFGFSTP 135 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + P T + L + +DLFG RR +E+S A +D+ +++ A+L++ ++ + + Sbjct: 136 K--PGPFTLYSASLSVSYALDLFGGVRRALEASRAQVDTQRYELEAARLSLAGNVVTAVV 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +I+ ++L + + ++ +F G +++ ++ + E+ +P L + Sbjct: 194 RMASLDAQIATTQRLLAAQRDQLTITERRFGAGGVARVEVLSQRTLLAQTEATLPPLAQQ 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H +S LLG L + P+ P+ + +P+ L + RPDIR E Sbjct: 254 AAQARHRLSVLLGREPGAGLPDLPSLDALRLPD---PLPVSLPSTLAQRRPDIRAAEAMW 310 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 ++ A +G+A ++L+P ++L+ GS N F ++ W+ G L P+F G +++ Sbjct: 311 HEASANVGVATANLFPRITLSAGLGSETTGFRNLFGAGSSIWNLGGSLTQPLFHGGALRA 370 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R AE++ +++ VL ++EV +AL +++ D + + A + +++ Sbjct: 371 RKREAEAAYDAAGAAYRQAVLQGLQEVADALHAVHNDARALQARALATDQAAQALRAEQA 430 Query: 403 NYRQGRYSLLDILDIER 419 Y G S L +LD +R Sbjct: 431 RYAAGGISTLALLDAQR 447 >gi|187919133|ref|YP_001888164.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187717571|gb|ACD18794.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 477 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 101/414 (24%), Positives = 203/414 (49%), Gaps = 18/414 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHR 107 WW+ F D +++LV+ L NL + A ER+ A++ RA L P S+ AS S + Sbjct: 56 WWDQFGDPVMHQLVESVLTGNLDVQAAVERVRQAQDLAKQNRAALLPELNASATASDSRQ 115 Query: 108 FIPN----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P ++ G L + W D+FG +R + ++ A + + ++ +L + + Sbjct: 116 NTPPPLGYVRQAGVG-LTASWTPDVFGGERLAVLAAQAQVSGRQSALNEVRLALAANTAA 174 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YID R + ++ I + + ++L+ + G +++L + + + +++ +++ IP + Sbjct: 175 AYIDLRWAQSQLQILSDNEQIRARALKLTQQRLHYGLSTQLDVARAQNQLQDLQAQIPRV 234 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQ 281 + + + + I+ G + + + P +P + P++ + RPD+R Sbjct: 235 QSAVQHQLSLIAVYSGRTPESVDSLLLANARDIPVPAQSVPQML--PSEALLQRPDVRTA 292 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDK 337 + A++G++K+ YP LN + L +S+ G T +S PIF+ Sbjct: 293 YATVEQRAAEVGVSKAQRYPQFRLNLADGLLA-SSYLGLPTLTDNLFSAALNATSPIFNA 351 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I +NI +ES +E + Q+T+L A+KE+E+ + + V +L A++ +++ Sbjct: 352 GRITANIDASESRMRESQLGLQQTMLQALKEIEDNRSDLVSGAVQVQRLGGALDASNQAL 411 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS Y+ G LD+L + A + L+ AKR+ A S V LY ++G G++ Sbjct: 412 HLSSELYKGGAADFLDVLTAQEAYLRDAESLNQAKREHALSAVALYRSLGGGWD 465 >gi|134278614|ref|ZP_01765328.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|254193660|ref|ZP_04900092.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|254300984|ref|ZP_04968428.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|134250398|gb|EBA50478.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|157811000|gb|EDO88170.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|169650411|gb|EDS83104.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] Length = 508 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 26/421 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ W F D L L++ AL N + A +R+ A+ RAD +P+ A+ + Sbjct: 70 TLEQFDWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAYGIRRADQYPTIAANAA 129 Query: 106 H-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 + RF P L + G+L S W+ID +G+ R +++ A LD+ A D ++ Sbjct: 130 YLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA--AALDTFLAS-DASRR 186 Query: 155 NVISKLIPSYIDA----RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 V LI DA + ER+++ ++ + + ++ + ++ +GA SKL L + E Sbjct: 187 AVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRRYEEGAISKLDLTQSEI 246 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ L+++ + H + L+G A ++ P+L G+P++ Sbjct: 247 LLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS-IAPDL----APGLPSE 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ NRPD+ E +L + A IG A++ +P ++L SI N F W+F Sbjct: 302 LLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGSTELHNLFASGTAAWNFI 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P L +PIFD G+ N++ A + E +++T+ A ++V +AL + + V Q Sbjct: 362 PNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVADALAARHWLADQVRIAQ 421 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ + Y G L++LD +R + L +R L S V LY A+G Sbjct: 422 ETLATQAERARLAKLRYDSGAARFLEVLDAQRDLLNAQQQLVQTRRALLASRVALYAALG 481 Query: 448 S 448 Sbjct: 482 G 482 >gi|38347965|ref|NP_941214.1| copper/silver efflux system outer membrane protein CusC [Serratia marcescens] gi|156936339|ref|YP_001440255.1| copper/silver efflux system outer membrane protein CusC [Cronobacter sakazakii ATCC BAA-894] gi|170766787|ref|ZP_02901240.1| cation efflux system protein CusC [Escherichia albertii TW07627] gi|238910395|ref|ZP_04654232.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|38259442|emb|CAE51670.1| outer-membrane efflux lipoprotein (silver resistance) [Serratia marcescens] gi|156534593|gb|ABU79419.1| hypothetical protein ESA_04239 [Cronobacter sakazakii ATCC BAA-894] gi|170124225|gb|EDS93156.1| cation efflux system protein CusC [Escherichia albertii TW07627] gi|322614030|gb|EFY10966.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617922|gb|EFY14815.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625464|gb|EFY22290.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629929|gb|EFY26702.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632182|gb|EFY28933.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636467|gb|EFY33174.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322644677|gb|EFY41213.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651300|gb|EFY47684.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652786|gb|EFY49125.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659088|gb|EFY55340.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663210|gb|EFY59414.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668697|gb|EFY64850.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674499|gb|EFY70592.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678295|gb|EFY74356.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682448|gb|EFY78469.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684161|gb|EFY80167.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192283|gb|EFZ77515.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196290|gb|EFZ81442.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201438|gb|EFZ86504.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206452|gb|EFZ91413.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212044|gb|EFZ96871.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216949|gb|EGA01672.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220316|gb|EGA04770.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224363|gb|EGA08652.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228291|gb|EGA12422.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233441|gb|EGA17534.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237097|gb|EGA21164.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243688|gb|EGA27704.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246070|gb|EGA30057.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250846|gb|EGA34724.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257658|gb|EGA41344.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261867|gb|EGA45434.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267741|gb|EGA51223.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268621|gb|EGA52088.1| copper/silver efflux system outer membrane protein CusC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323974960|gb|EGB70070.1| outer membrane efflux protein [Escherichia coli TW10509] Length = 461 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/462 (23%), Positives = 225/462 (48%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ ++ ++ + W F D + +L+ Sbjct: 12 IFILAGCVSLAPEYQRPAAPV-PQQFSLSHNSLTPAVNGYQDTGWRNFFVDPQVTRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLD 121 AL N + A ++ A+ AD +P AS + LK + +L+ Sbjct: 71 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDARLE 130 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 LSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 248 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ + + + PNL + ++ RPDI E +L + A IG Sbjct: 249 TYRALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGA 300 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Sbjct: 301 ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + +A K+V + L + + + Q ++ + ++ + Y G S Sbjct: 361 QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSY 420 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 421 IEVLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|22124618|ref|NP_668041.1| outer membrane protein, efflux pump [Yersinia pestis KIM 10] gi|45440456|ref|NP_991995.1| outer membrane efflux lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|108808974|ref|YP_652890.1| outer membrane efflux lipoprotein [Yersinia pestis Antiqua] gi|108810771|ref|YP_646538.1| outer membrane efflux lipoprotein [Yersinia pestis Nepal516] gi|153997479|ref|ZP_02022579.1| probable outer membrane efflux lipoprotein [Yersinia pestis CA88-4125] gi|162421409|ref|YP_001608301.1| outer membrane protein oprM [Yersinia pestis Angola] gi|165925819|ref|ZP_02221651.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. F1991016] gi|165936698|ref|ZP_02225265.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. IP275] gi|166010130|ref|ZP_02231028.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. E1979001] gi|166214280|ref|ZP_02240315.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. B42003004] gi|167399556|ref|ZP_02305080.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420769|ref|ZP_02312522.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423464|ref|ZP_02315217.1| outer membrane protein oprM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467380|ref|ZP_02332084.1| outer membrane protein oprM [Yersinia pestis FV-1] gi|218930495|ref|YP_002348370.1| putative outer membrane efflux lipoprotein [Yersinia pestis CO92] gi|229839131|ref|ZP_04459290.1| probable outer membrane efflux lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896620|ref|ZP_04511787.1| probable outer membrane efflux lipoprotein [Yersinia pestis Pestoides A] gi|229899695|ref|ZP_04514836.1| probable outer membrane efflux lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229900971|ref|ZP_04516095.1| probable outer membrane efflux lipoprotein [Yersinia pestis Nepal516] gi|270489151|ref|ZP_06206225.1| putative outer membrane efflux protein OprM [Yersinia pestis KIM D27] gi|294505183|ref|YP_003569245.1| outer membrane protein, efflux pump [Yersinia pestis Z176003] gi|21957423|gb|AAM84292.1|AE013672_10 putative outer membrane protein, efflux pump [Yersinia pestis KIM 10] gi|45435313|gb|AAS60872.1| probable outer membrane efflux lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|108774419|gb|ABG16938.1| outer membrane efflux lipoprotein [Yersinia pestis Nepal516] gi|108780887|gb|ABG14945.1| outer membrane efflux lipoprotein [Yersinia pestis Antiqua] gi|115349106|emb|CAL22069.1| probable outer membrane efflux lipoprotein [Yersinia pestis CO92] gi|149289116|gb|EDM39196.1| probable outer membrane efflux lipoprotein [Yersinia pestis CA88-4125] gi|162354224|gb|ABX88172.1| outer membrane protein oprM [Yersinia pestis Angola] gi|165915347|gb|EDR33957.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. IP275] gi|165922431|gb|EDR39608.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. F1991016] gi|165991037|gb|EDR43338.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. E1979001] gi|166204512|gb|EDR48992.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. B42003004] gi|166961575|gb|EDR57596.1| outer membrane protein oprM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052060|gb|EDR63468.1| outer membrane protein oprM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057634|gb|EDR67380.1| outer membrane protein oprM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682310|gb|EEO78402.1| probable outer membrane efflux lipoprotein [Yersinia pestis Nepal516] gi|229687187|gb|EEO79262.1| probable outer membrane efflux lipoprotein [Yersinia pestis biovar Orientalis str. India 195] gi|229695497|gb|EEO85544.1| probable outer membrane efflux lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700398|gb|EEO88430.1| probable outer membrane efflux lipoprotein [Yersinia pestis Pestoides A] gi|262363245|gb|ACY59966.1| outer membrane protein, efflux pump [Yersinia pestis D106004] gi|262367176|gb|ACY63733.1| outer membrane protein, efflux pump [Yersinia pestis D182038] gi|270337655|gb|EFA48432.1| putative outer membrane efflux protein OprM [Yersinia pestis KIM D27] gi|294355642|gb|ADE65983.1| outer membrane protein, efflux pump [Yersinia pestis Z176003] gi|320016686|gb|ADW00258.1| putative outer membrane efflux lipoprotein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 468 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 105/458 (22%), Positives = 214/458 (46%), Gaps = 29/458 (6%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LLAGC ++ P+Y +P P+ T +S +S +I W E+ D L +++ +AL+ Sbjct: 12 ALLAGCISLDPDYQRPVAPVPATLPYSTASSSKAADI---PWQETIIDPKLRQVIALALE 68 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD--------- 121 N + QA I AA+ RA P+ A ++ L S G + Sbjct: 69 SNRDLRQAIADIEAARAQYGVQRAAQIPTVNAGVNGSRGRGLSDTSDGNNNTAISQSYGA 128 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERI 174 S +++DLFG++ + S A ++ A + AK + +I+ +++ + ++ Sbjct: 129 QASVSAFELDLFGKKSSL--SHAEFETYLATEEAAKTTRITLIADTATAWVTLAADQNQL 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L +++++L+ L+ G S++ + +E +S +D+ + + + + + Sbjct: 187 LLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQSARADVAQYKTTVAQDKNALD 246 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P H + ++ P + + +G+ +D++ NRPD+ E KL + A IG Sbjct: 247 LLVGQPVAA--HLLPVTASTL-PEVIKAVPVGLSSDVLLNRPDVLEAEHKLKSANANIGA 303 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L S ++ + WS P + LPIFD G ++ + +++ Sbjct: 304 ARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSLAPAITLPIFDGGANRAALEYSQAQK 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ + A KEV +AL ++ Q V ++S+ L+ Y+QG + Sbjct: 364 TGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQQAYVAAAQESVELAQKRYKQGIDTY 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R + L ++ + + LY +G G Sbjct: 424 LNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVLGGG 461 >gi|329114851|ref|ZP_08243607.1| Outer membrane protein OprM [Acetobacter pomorum DM001] gi|326695748|gb|EGE47433.1| Outer membrane protein OprM [Acetobacter pomorum DM001] Length = 494 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 57/488 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLN 62 A ++ LL GCT+ P+Y +P PL T ++ N + + W + F D L Sbjct: 17 ACLAVAAGLLGGCTMIPKYKRPQPPLAQTWADYQHTDNTMLQKAASDIGWRDFFIDPRLQ 76 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-----------ISHRFIPN 111 +L+ IAL++N I QA I A+ A LFPS A+ F P Sbjct: 77 QLITIALRENRDIRQAAASIVEAQGRYDIQHAGLFPSIGATGGPMYQAPSDAAGLSFAPG 136 Query: 112 LKTNSTGQLD--------------SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIA 152 L + TG S ++ID+FG+ R E +LA ++ + V I Sbjct: 137 LDSAQTGTGMARNPFRFYQGGIGFSAYEIDIFGRIRSLSREAAEETLAQQEN-FRGVTI- 194 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++I+++ +YI K+ + +A L + ++L H K+ G L++ + E ++ Sbjct: 195 --SIIAQVANAYIAWLGDKQDVILAQNTLGSQQGTLQLIHDKYNHGEADLLTVRQAETQV 252 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + + IS L+G P L SN Q + + G+P+DL+ Sbjct: 253 AQSAGLLADSQRKVEQDENLISLLIGAPIPADLP---PPSNLGQQTVLADVPAGLPSDLL 309 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK 329 RPDI E L + A IG A++ +P ++L +G +L F T W P Sbjct: 310 NRRPDIVQAEHDLLSAQADIGAARAAFFPRITLTASDGISSLQFHKLFTSAATTWGVNPN 369 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTK 385 + +P++ G+ N++ +++ + +++TV A +EV +AL ++E K++ Sbjct: 370 IQIPLWTWGQNSGNLKASKARRDSKITAYEKTVQTAFREVADALAGRKAYLDEQKEVDAL 429 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV---EVDLSIAKRQLAKSYVDL 442 + + + ++ L+ + Y G S L L+ +RA + ++ + +++ Q + V L Sbjct: 430 VNASGDAYR----LAKMRYEAGIDSYLTTLESQRAYLQAQQNQISVDVSRYQ---NLVTL 482 Query: 443 YIAIGSGY 450 Y ++G G+ Sbjct: 483 YRSLGGGW 490 >gi|255593533|ref|XP_002535893.1| Outer membrane protein oprM precursor, putative [Ricinus communis] gi|223521615|gb|EEF26490.1| Outer membrane protein oprM precursor, putative [Ricinus communis] Length = 601 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 216/461 (46%), Gaps = 43/461 (9%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTIL 76 +G Y++P P LP ++ + L L +WW FND LN+LV AL +N + Sbjct: 145 LGDLYSRPA-PQLPAEYGAAGANALSAEQQLALQQWWTLFNDNQLNQLVDTALAKNNNVQ 203 Query: 77 QATERINAAKENILSVRADLFPSSYASISHR------------FIPNLKTNSTGQLDSDW 124 A RI A + + A+L P+ A+ S F N + L+ + Sbjct: 204 LAVARIEEADAQMREIGANLLPTVTATGSGLRNRVTESGVFPVFGNNPRKTYKVGLNGSY 263 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DL+G+ RR E++ A L + + ++ S + Y+ R ++ + Q L Sbjct: 264 ELDLWGKLRRANEAARAQLLATRYAKEAVTWSLSSLVANHYLMIRSLDAQLLVNTQNLKT 323 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL---LGYP 240 + +++L+ + G ++ L + E + ++++ L++ ++ H I L LG Sbjct: 324 AQDSLDLAKRRVEGGVSTILDAHQAELVVTTLQTQTLELKRLRALSEHQIGLLTNDLG-- 381 Query: 241 ATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 ++ + + P+ G+P+ L+ RPD+R E+ + + A I +A++ Sbjct: 382 -------LKIAAGDLMAMPTPPVAPTGLPSALMEARPDVRQAEQDMVSANANIAVARAAF 434 Query: 300 YPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YPS+SL+ G ++ +N WS G + +PIF+ G++ + + +A + ++ Sbjct: 435 YPSISLSTTYGGESIALNNLLKSPARVWSLGLDISMPIFNGGRLNARLDQATAQQKQVLA 494 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY-----SL 411 T+Q T+ A EV +AL + + ++ Q A+ + K+ + +++ + RY S Sbjct: 495 TYQNTLQTAFTEVSDALVNAQQYRE-----QEALAVSKEKTTGNILRVAKNRYEAGYTSY 549 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L++LD +R + + +++ + VDL+ A+G G+ P Sbjct: 550 LEVLDAQRNHNEATQAVVQSRQNTLTASVDLFKALGGGWKP 590 >gi|187920548|ref|YP_001889580.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187718986|gb|ACD20209.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 498 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 44/465 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIG------NSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 CTVGP Y +P + PT + S I+ D WW +F+D +L L AL Q Sbjct: 22 CTVGPNYERPQAEVPPTWQTDSYWRVAVPSHAPISPD---WWNAFSDPTLATLETQALAQ 78 Query: 72 NLTILQATERINAAKENILSVRADLFPS-SYASISHRFI-------PNLKTNSTGQLDSD 123 N T++ A+ A+ + + RA P A+ RF N T +T + ++ Sbjct: 79 NQTLVAASAHYEQARATLANDRAQQIPEVDLAAQGSRFRISQNRPRTNYGTPTTSTVQNN 138 Query: 124 --------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + DLFG+ RR +E + A+ + + A+L + + L Y R I Sbjct: 139 VQLGPTISYDTDLFGRIRREVEGAAASAQQSADDLANARLVLTTDLASDYFSLRELDAEI 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + +Q + L +K ++ + G+ S L +++ ++ + S L H I+ Sbjct: 199 DVLNQSVKLQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQAQLLLNQRAQFEHAIA 258 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 L+G PA +F + +P + +P I +G+P+D+++ RPD+ E+ +A + A Sbjct: 259 ALVGVPAPQF---------SIEPKVLAVQVPAIALGVPSDVLQRRPDVASAERAMAAANA 309 Query: 291 KIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+AK+ +PSL+L SI T S T W+ G + +FD G+ +N++ A Sbjct: 310 QIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAAVGQVLFDGGRRAANVKFA 369 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +++TVL A ++V++ +T ++ + AV + ++L+ Y G Sbjct: 370 SEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSSEAVTDARHLLALANDRYSGG 429 Query: 408 RYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD++ +++ E D+ I +Q+ S V L A+G G++ Sbjct: 430 LVAYLDVITAQQSLLTSERQDVQIHGQQMTLS-VSLVKALGGGWD 473 >gi|326315276|ref|YP_004232948.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372112|gb|ADX44381.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 491 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/414 (23%), Positives = 190/414 (45%), Gaps = 13/414 (3%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 + W E F D L +L+ +AL+ N + A I A+ RA FP+ A+++ Sbjct: 61 IDWREYFADPRLQRLIALALENNRDLRVAALNIEQARAQFQIQRAGQFPTVNAAVNASRQ 120 Query: 110 PNLKTNS------TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 P+ T G S W+ID FG+ + E +LA + ++++++ + Sbjct: 121 PSTTTGQYVNNYQVGLAVSAWEIDFFGRIAALKEQALAQYFATEEARRATQISLVASVAT 180 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + +E + I+ + L ++++L+ L+ G +S+L + + ++ + Sbjct: 181 GWFNLLADEELLDISRRTLQTRDESVQLTKLRLENGVSSELDYSQAQGLAQAARATFAQQ 240 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 ++ + + ++ LLG P + + +P + G+P+DL+ RPDIR Sbjct: 241 QRQRLQDENALALLLGQPLPQEIASTLDARTRLADAPAMPSLPAGLPSDLLVRRPDIRQA 300 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E++L + A IG A++ +P +SL G+++ F G + +S P+L LPIFD G Sbjct: 301 EQQLVAANANIGAARAAFFPRISLTASAGTVSNELSGLFKGGSWAFSLAPQLALPIFDGG 360 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++ + A +++++ A +EV +AL + + K Sbjct: 361 RNQATLDSARVGRDIAVAQYEKSIQTAFREVSDALAGQATLGEQFAAQRAQATADAKRFE 420 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGYN 451 LS + YR G S LD+LD +R+ E L + R L ++ V LY +G G+ Sbjct: 421 LSDLRYRNGVASYLDLLDAQRSLFTSE-QLVVQTRLLQLQNQVALYKVLGGGWT 473 >gi|296162708|ref|ZP_06845493.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295887024|gb|EFG66857.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 473 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/469 (24%), Positives = 218/469 (46%), Gaps = 37/469 (7%) Query: 4 LRAIFSL--FIVLLAGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFN 57 LR ++++ ++ L+ C P+Y +P P + +S + T++ WW+ F+ Sbjct: 8 LRCVWAVTACVLSLSACIDVSMPDYKRPDTPAKAS-WSDQKGAPVSAAATIEPDWWKGFH 66 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIP 110 D L+ L+ A+ N I RI+ A I +A P+ + +H+ Sbjct: 67 DPYLDTLIARAIAGNFDIKVLAARIDVAGTQIGEAKAGALPTMDLGAGADFEKTTHQTFA 126 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + N Q++ W ID++G+ + +++ A ++ A L ++S + +Y Sbjct: 127 K-QYNVATQVN--WDIDIWGKVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQILQ 183 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 F ++I + L+ ++ + + + G + +++ +AEI + + + L +S + Sbjct: 184 FDDQIEQQQKTLETNRQILTIYDGQRRNGLVPQTQVLRQQAEINRLTNQLLDLRRSRALA 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADS 288 + + TL+G PA EF Q + Q + + P+ G+PA L+ RPD+ E ++ ++ Sbjct: 244 NNALCTLIGVPAGEF----QMAKGHLQQRVQLPPVPDGLPAQLLARRPDVVAAEFRVLEA 299 Query: 289 VAKIGIAKSDLYPSLSLNG-----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDKG-KIK 341 +G AK PS+SL G S ALT SF + F P + +P+ D G + Sbjct: 300 YDLVGQAKLAQLPSISLTGHGGTASFALTDLLKSFT-----YGFMPSINIPLLDPGVRAH 354 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +A+S+ EQ ++ V+ A +EVENAL ++N K+ +LQ V + Sbjct: 355 VKVTQAQSTVAEQ--QYRVAVMGAFEEVENALVNVNSHKEQRVELQQEVSRLQIVADQIQ 412 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R G S L++ + ER + + +L +Q+ V LY A+G G+ Sbjct: 413 SQLRLGVVSQLEVFETERTLLEAQQELLANHQQILSDTVLLYKALGGGW 461 >gi|75675716|ref|YP_318137.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter winogradskyi Nb-255] gi|74420586|gb|ABA04785.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter winogradskyi Nb-255] Length = 494 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 113/462 (24%), Positives = 211/462 (45%), Gaps = 37/462 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC + + P + + P + ++ + L WW F + L L++ A NL I Sbjct: 36 AGCILTRDIPDPALDI-PMAYKAASTTAADALPALDWWRGFRSSELTSLMEEAQTVNLDI 94 Query: 76 LQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLK------TNSTGQLD- 121 A RI A + A L PS SY S L N +G L Sbjct: 95 AAAAARIIQADRQARIIGAALLPSVSIGGQESYFRTSGSSQSGLTNRGREVVNYSGTLSG 154 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQV---DIAKLNVISKLIPSYIDARHFKERISIAH 178 + +++D +G+ R +++LA L++A A D+ L + + +Y ++RI A Sbjct: 155 ASYELDFWGKNR--DATLAALETANASRFDRDVVALTTLVSVANAYFQVLTAQDRIRTAE 212 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + ++ ++ + + G S L + + E+ + ++ + +P L ++ N++ ++TL+ Sbjct: 213 RNIASARRILDALKQRLSAGTGSDLDVAQQESVLANLRATVPQLRQTLVQNINALATLVA 272 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P E + N P G+P++L+ RPDIR QE +LA + A +G A++ Sbjct: 273 RP-PESVTVKGGSLNRITAPRVTP---GLPSELLTQRPDIRRQELQLASATANVGSARAQ 328 Query: 299 LYPSLSLNGS--------IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +PS+ L +AL N+ ++ L PIFD +I SN ++ Sbjct: 329 FFPSIQLTAQGGYQSPALVALFAPNA-----AFFNLAGALTQPIFDGRRILSNFELTKAR 383 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E T+++TV++A +V NALT++ + + + + V +K+ LS + G Sbjct: 384 QDELLQTYRKTVISAFADVGNALTAVRQTTERLRLQREVVAASRKAFQLSEQQLQAGTAD 443 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ +L+ + + E LS A+ ++ V LY A+G G+ P Sbjct: 444 IIIVLNTQLTLFQAEDVLSQAQLARLQAIVSLYQALGGGWEP 485 >gi|324006396|gb|EGB75615.1| putative outer membrane efflux protein OprM [Escherichia coli MS 57-2] Length = 432 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 212/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N + W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|172064238|ref|YP_001811889.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171996755|gb|ACB67673.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 513 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/439 (25%), Positives = 203/439 (46%), Gaps = 47/439 (10%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDVSTPAAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLEAQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK--TNS 116 AL N + A R+ A+ + R+ FP A S + +F P TN+ Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQVGAGFGPTREGLSSASQFQPQGTGPTNA 151 Query: 117 T---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 152 TLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDS 211 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + ++L + ++L +F +G S+L + + + E+ + ++D + + + H Sbjct: 212 DQDLYRRTVELRDQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAASEHA 271 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ +A + Sbjct: 272 LAILLGKAPADFA---------FKETPIVPVAVKVPAGLPSALLERRPDVSAAERAMAAA 322 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIK 341 A+IG+AKS +P L + G+ A T N F + + GP L LP+FD G+ Sbjct: 323 NARIGLAKSAYFPKLDITGAFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRA 382 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++A + EQ +++ VL A +EVE+ L + + AV +++ +LS Sbjct: 383 AGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAATLSR 442 Query: 402 INYRQGRYSLLDILDIERA 420 Y++G + LD++D ER+ Sbjct: 443 TQYQEGEVAYLDVIDSERS 461 >gi|26986923|ref|NP_742348.1| RND efflux transporter [Pseudomonas putida KT2440] gi|24981532|gb|AAN65812.1|AE016209_11 efflux transporter, outer membrane protein, putative [Pseudomonas putida KT2440] gi|313496549|gb|ADR57915.1| RND efflux transporter [Pseudomonas putida BIRD-1] Length = 472 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 209/469 (44%), Gaps = 32/469 (6%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-------KWWESFND 58 I + + L C VGP+Y P + Q + N + D++ WW+ + D Sbjct: 5 ILAGLCLSLGACMMVGPDYEVPGDAAV--QRNDLNGPLRQDADSVVSAPVPEDWWQLYQD 62 Query: 59 TSLNKLVKIALQQNLTI-------------LQATERINAAKENILSVRADLFPSSYASIS 105 LN+LV+ AL N + ++ E + L S A + Sbjct: 63 QRLNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAFLQ 122 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +P + + + ++ DL+G +R E++ AN D+ A D A++ +++ ++ +Y Sbjct: 123 PEKVP-VANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 E IA + LDL +++++L+ G + + + + + KS+ +++P + Sbjct: 182 TQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKA 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ ++ LL P + + N +P+ G A L++ RPD+R E++ Sbjct: 242 ERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDG--AALLKRRPDVRQAERQ 299 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA + A IG+A LYP +S+ G+I + + P N W FGP++ I G + Sbjct: 300 LAAATAYIGVATGALYPDISIGAQVGTIGILENLGEPSTN-RWGFGPQISWSIPTNG-TR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + IR AE+S Q + VLNAI+E + L + L A + K++ + Sbjct: 358 ARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTH 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ GR S L L R + L+ A Q+A+ + +++A+G G+ Sbjct: 418 RYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGW 466 >gi|254419502|ref|ZP_05033226.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Brevundimonas sp. BAL3] gi|196185679|gb|EDX80655.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Brevundimonas sp. BAL3] Length = 477 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 107/432 (24%), Positives = 199/432 (46%), Gaps = 31/432 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQ 70 LLA C VGP+ +P+ T +G++ ++ + WW ++D +L+ L++ A Sbjct: 17 ALLAACAVGPQAPAADLPVAGTGAFVGSASTTVSTAQARDDWWRLYDDPTLDGLIRQAFA 76 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFI-------PNLKT 114 +N + A + A + ++ R FP+ S AS + + P + T Sbjct: 77 ENNELEAAFANLRAVRASLSEARVGRFPTTTTSAQAQRSRASAATSSVLEADGKAPEIDT 136 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 G L + +++DLFG +ES++ + + +++V ++ +Y DA Sbjct: 137 YDVG-LSASYEVDLFG---RVESTIRAARADARAAEAALATVQVSVAAETARAYADACSA 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +I++A + L L + +L+ GA + L + A + + +PTL S + Sbjct: 193 NAQIAVAERTLGLQRNTAQLTQTLLDGGAGTGLDVASARAALAQTAATLPTLRASRNEAL 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++TL G T + P L PI +G A L+ RPD+R E LA + A Sbjct: 253 YRLATLTGV--TPAEASQAAAACVRPPQLSQPIPVGDGAALLARRPDVRQAEANLAAAAA 310 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 ++ +A ++LYP +SL GS+ T +S N +SFGP + + ++ I+ A Sbjct: 311 RVNVATTNLYPQISLGGSLGSTAQDSGELGDDQNFRFSFGPLISWSFPNVFAARAQIKAA 370 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + ++ +TVL A++E E AL++ + L A + ++ +LS + G Sbjct: 371 DARSDAALASFDQTVLTALQETETALSNYANELDRRAALTEARDQAARAANLSRQRFNAG 430 Query: 408 RYSLLDILDIER 419 S L +LD ER Sbjct: 431 ADSFLLVLDAER 442 >gi|217968774|ref|YP_002354008.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|217506101|gb|ACK53112.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 496 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/476 (24%), Positives = 222/476 (46%), Gaps = 57/476 (11%) Query: 11 FIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 + +L+GC ++ P +P+ + ++ + L W E F D +L L++ AL Sbjct: 38 VLAMLSGCASLAPALDPIALPVASNWRTQPDAPSGAAATELAWREYFTDPALQALIETAL 97 Query: 70 QQN----LTILQATE-----RINAAKENIL------SVRADLFPSSYASISHRFIPNLKT 114 + N + +L+ E RI A++ + +RA L P ++ R + + Sbjct: 98 ENNRDLRVAVLRTEEARAAFRIQRAQQAPMVGVGAQQIRAGL-PDGLQPLAGRSVLEVNV 156 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKER 173 S G S W++DL+G+ R ++++ A Q A +L +++++ +Y+ R ER Sbjct: 157 ASVG--ISSWELDLWGRVRSMKTAALEQWLATEQGQRAVELALVAQVADAYLGLRELDER 214 Query: 174 ISIAHQILD-------LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 IS+A + ++ +++K +EL H S+L L ++ + ++ LE + Sbjct: 215 ISLARRTVENQQELAQIFQKRLELGH-------GSRLELTQVRTLLSQGKALQVQLELAR 267 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 + ++ LLG + S L +P + G+P+DL+ NRPDI E L Sbjct: 268 EQQRNALALLLGSEP-----QLPPSSAPMDEALVMPELRPGLPSDLLVNRPDILAAEHAL 322 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A IG A++ +P ++L GS++ + + F W F P + LPIFD G ++ Sbjct: 323 RARQANIGAARAAFFPRIALTGGAGSVSTSLSDLFSSGTRAWLFQPTIELPIFDAGMRQA 382 Query: 343 N-----IRRAESSAQEQYITWQETVLNAIKEVENALTSINE--DKKIVTKLQHAVELHKK 395 N +RR + A+ ++ + A ++V +AL + + ++ IV + HA + + Sbjct: 383 NLDVSVVRRDIAIAE-----YEGAIQAAFRDVSDALAARQKLTEQLIVARQAHAEQSERL 437 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++ + G + L++LD ER VE L +R S + LY A+G G N Sbjct: 438 KLARTLFDA--GSAAHLEVLDAERDLLAVEQQLVQVRRAALSSQIGLYAALGGGIN 491 >gi|73540112|ref|YP_294632.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72117525|gb|AAZ59788.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 500 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 103/458 (22%), Positives = 205/458 (44%), Gaps = 31/458 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNLT 74 G GP+ +P G+ + N + +WW F +L+ ++ AL + T Sbjct: 32 GYVAGPQPQSTVAAEMPGNLPHGHPQTFANGADVPAQWWALFRSPALDATIRAALDGSPT 91 Query: 75 ILQATERINAAKENILS-VRADLFPS------------SYASISHRFIPNLK--TNSTGQ 119 + QA ++ A+EN+ + A +P+ ++ S+ IP+ T Sbjct: 92 LAQAQAKLREAQENLAARTGATRWPTVDANLNTTRQQVNFQSLGITAIPSPGPFTLYGAT 151 Query: 120 LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + + +DLFG QRR +E A +D + + A+L + + + + I + +++ Sbjct: 152 VQVSYVLDLFGGQRRELEGLQAAVDYQRYEFEAARLALAANVATAAIREAGLRAQLADTV 211 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 I + ++ + ++ + G +++ + + +E+ ++ IP L + H ++ G Sbjct: 212 AIAEAQQRELGIAEERLRTGGIARVDVQRQRSELAQTQALIPGLAQQIESTRHQLAVYTG 271 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 PA L + + +L +P + + +P+ L R RPDIR E L + A IG+A Sbjct: 272 QTPAAAQLPEFRLE------DLQLPETLPVSLPSTLARRRPDIRAAEALLHQASANIGVA 325 Query: 296 KSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++LYP ++L+ S T N F +N WS L P+F G++ + R +E++ + Sbjct: 326 TANLYPQITLSASGGWQSTTARNLFDSFNV-WSLAAGLVQPVFHGGELLARKRASEAAYE 384 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + + +L ++ V +AL ++ D + + ++ + YR G S L Sbjct: 385 QSLAAYHQAILLGLQNVADALRALEADAATLRARADNARQARATLDIVSQQYRLGGVSQL 444 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER + + +DLS A L A+G G+ Sbjct: 445 TLLDAERQSRQASLDLSQATASRLADSAALLQALGGGW 482 >gi|311280551|ref|YP_003942782.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] gi|308749746|gb|ADO49498.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] Length = 461 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 218/460 (47%), Gaps = 35/460 (7%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKLVKI 67 LAGC ++ P+Y +P +P+ P QFS+ S+N + T W F D + + Sbjct: 14 FLAGCVSLAPDYQRPELPV-PQQFSL--SRNALVPTTAGYQDTGWRTFFADPQARRFIDE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL+ N + A+ ++ A+ AD +P AS + LK +S L Sbjct: 71 ALRNNRDLRMASLKVQEARAQYNVTDADRYPQLNASSDASYKGGLKGDSATSKEYEAGLG 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +IS + SY + R E+++IA + Sbjct: 131 LTFDLDFFGRLKNMSEADQQNFFASQQAQRAVHILLISNVSQSYFNQRLAWEQLNIAKET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S ++I E + + L G Sbjct: 191 LQNYQQSYAFVEQQLVTGSTNVLALEQARGVIESTRAEIAKREGQLAQANNALQLLTGS- 249 Query: 241 ATEFLHYMQKQSNNFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + + N + +L +P N+ + ++ RPDI E +L + A IG A++ Sbjct: 250 ----YQMLPNDALNLEKDLNPVALPPNLS--STILLQRPDIMEAEHQLRAADANIGAARA 303 Query: 298 DLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS++L I+ + N F + W+F PK+ +PIF+ G+ ++N+ AE Q+ Sbjct: 304 AFFPSITLTSGISSSSTDLTNLFTASSGMWNFVPKIEIPIFNAGRNQANLTLAEVRQQQS 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++ + A K++ +AL+ + + Q + + ++ + Y G S +++ Sbjct: 364 VVNYEQKIQAAFKDIADALSLRDSISGQIAAQQRYLNSLQITLQRARGLYASGAVSYIEV 423 Query: 415 LDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD ER AT + +DL A++ + ++L+ A+G G++ Sbjct: 424 LDAERSLFATRQTILDLKYAQQ---VNEINLFTALGGGWS 460 >gi|187478517|ref|YP_786541.1| outer membrane multidrug efflux protein [Bordetella avium 197N] gi|115423103|emb|CAJ49634.1| outer membrane multidrug efflux protein [Bordetella avium 197N] Length = 479 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 103/420 (24%), Positives = 194/420 (46%), Gaps = 26/420 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW + D L++L+ A N + A + A+ +A P+ + Sbjct: 59 WWRLYKDPVLDQLITSAFTANTDLRAAAANLERAQAMTREAQAQQLPTVGVNAAPTFGHV 118 Query: 103 SISHRFIPNLKTNS----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 S P+++ ++IDLFGQ RR IE++ + +A A D ++ V Sbjct: 119 SGVQELQPDVRPQDRWSYAAGASISYQIDLFGQIRRAIEAARDDAQAAQAAYDATRVTVA 178 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ +Y D +++ A + + + ++++ G + L L + +++ +++ Sbjct: 179 AETARAYADLCSAGMQLASARRSVAVQQESVNAVQRLQNAGRGTALDLSRASSQLAQLQA 238 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++P E R + ++ L G E + + + P L I +G A L+R RPD Sbjct: 239 ELPPFEARQRSAFYRLAALTGRLPAELPQKLMQCAQA--PRLTQAIPVGDGAALLRRRPD 296 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNT-HWSFGPKLYLPIF 335 IR E+ LA + A++G+A +DLYP +SL S A + F T WS GP + + Sbjct: 297 IRQAERSLAAATARVGVATADLYPKISLGLSGASGGPATRFGNRGTLSWSIGPLITWTLP 356 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTKLQHAVE 391 + G ++ I +AE+S + + TVLNA++E E+AL S ++ D + +V Sbjct: 357 NTGAAQARIAQAEASTKAALARFDGTVLNALRETESALVSYARQLDRDSALRAARDQSVL 416 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ L I G+ L +LD ER A E L+ ++ L+ ++L++ +G G+ Sbjct: 417 AARQARQLFQI----GKTDSLSVLDAERTLAGNESALAASQAALSDDQIELFLTLGGGWE 472 >gi|238897145|ref|YP_002921893.1| putative outer membrane efflux protein [Klebsiella pneumoniae NTUH-K2044] gi|238549475|dbj|BAH65826.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 454 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 115/464 (24%), Positives = 212/464 (45%), Gaps = 29/464 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L KLV IAL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKLVSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S + E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G S +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLSQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAG 410 Query: 408 RYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|330945107|gb|EGH46839.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 384 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 27/376 (7%) Query: 20 VGPEYTKPH---MPLLPTQFSI-GNSKNLINIDT-LKWWESFNDTSLNKLVKIALQQNLT 74 VGP+Y P + L Q + G S N ++ WW + D L++LV A+ N Sbjct: 4 VGPDYQLPKDGAINRLDLQGELAGRSVNTVSAPVPAHWWRLYQDARLDELVGQAIASNTD 63 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFI-------------PNLKTNSTGQLD 121 + A + A+ A ++ A I + + P G L Sbjct: 64 LRIAAANLQRARYQTSEAEAAGGFTNGAKIGAQRVQESGEAFLLTDKVPVTNVGDVG-LT 122 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + ++ DLFG +R IE++ AN+D+ A VD A++ V++ ++ +Y E + IA + Sbjct: 123 TSYQFDLFGTLQRGIEAAQANVDANQAAVDTARITVVADVVRAYTQICAANEELDIARES 182 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 LDL K+++ L+ G + + + + + KS+ +++P E + + +S LL P Sbjct: 183 LDLQKQSVSLNQRLRDAGRGDETQVTRSQTQFKSLRAEMPRYEARRQAAMFRLSMLLAKP 242 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + + N P++ + +G A L++ RPD+R E+ LA S A+IG+A +LY Sbjct: 243 VEQLPAGV--STCNQLPHIAQVMPVGDGAALLKRRPDVRQAERHLAMSTAEIGVATGELY 300 Query: 301 PSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P +S+ SI T + P N W FGP L I G ++ I +AE+SAQ Sbjct: 301 PDISIGASIGTTGLIENLGKPAAN-RWGFGPLLNWTIPSNGS-RARIHQAEASAQAALAR 358 Query: 358 WQETVLNAIKEVENAL 373 + VLNAI+E + L Sbjct: 359 FGGLVLNAIRETQTGL 374 >gi|300990246|ref|ZP_07179162.1| putative outer membrane efflux protein OprM [Escherichia coli MS 45-1] gi|300407134|gb|EFJ90672.1| putative outer membrane efflux protein OprM [Escherichia coli MS 45-1] Length = 432 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGGIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|329113692|ref|ZP_08242467.1| Solvent efflux pump outer membrane protein SrpC [Acetobacter pomorum DM001] gi|326696955|gb|EGE48621.1| Solvent efflux pump outer membrane protein SrpC [Acetobacter pomorum DM001] Length = 483 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 122/485 (25%), Positives = 221/485 (45%), Gaps = 52/485 (10%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ + L + L C++ P+ + P + L P + ++ WW++F+ LN Sbjct: 11 IKIVLLLPVAFLEACSLQPKTSLPKVTL-PQAWENTPAQQFYGKAQKDWWQNFHQPKLNN 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFIPN 111 LV I LQ+N+ I A E++ A++ A P +S A I P Sbjct: 70 LVSIGLQENIDINIAYEKLQASRIETKIAYAANMPEINGTAGYSRNYTSTAGIGDVLRPL 129 Query: 112 LKTNSTGQ---------------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 L + G + + W++DL+G R + +A+ + Q DI +++ Sbjct: 130 LGLDQGGSYLEPKGVSYSNFNTGMFASWELDLWG-RYKLMRKVADANRQAFQDDIEAVSL 188 Query: 157 -----ISKLIPSYIDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKLEA 210 I +L +++ E A IL K IE +++ + +G S+ L++ Sbjct: 189 SFEAEICRLYFLWVNLTQMVEVEKKASNIL----KEIETINNASYQRGLISQTVLLEQSN 244 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI---PINIGI 267 + + L+ + + +STL+ Y + L +F P Y P + I Sbjct: 245 QFHKVFMKYQELDNAQQAVRRALSTLV-YNRPDALSV---NDQSFSPIDYTQITPAPLKI 300 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALT-HDNSFPGYNTH 323 P+ L+++RPDIR E++L + A +GIA++D YP ++ +G + ALT + + NT Sbjct: 301 PSVLVQSRPDIRAAEQRLHAASAMVGIARADFYPRITFSGELSIDALTLTEFGWGARNTQ 360 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 FGP L LPIF+ GKI + +S + + ++ TVLNA KE E+AL + N + Sbjct: 361 --FGPTLTLPIFEGGKIARQVELRQSELKNAGLEYKRTVLNAWKETEDALANYNMTRAQY 418 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 E K S +YR+G S ++ L + A+ +++L +++L ++Y+ LY Sbjct: 419 GDAAQMAENAKISEKRVGASYRRGDESKVEFLVSQLASLDCKIELLNMQQRLMENYIRLY 478 Query: 444 IAIGS 448 + G Sbjct: 479 VVSGG 483 >gi|260753985|ref|YP_003226878.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553348|gb|ACV76294.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 567 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 220/486 (45%), Gaps = 47/486 (9%) Query: 4 LRAIFSLFIV-----LLAGCTVGPEYTKPH-----MPLLPTQFSIGNSKNLINIDTLK-- 51 LR + SL V L AGC +GP+Y + P F +K L + L Sbjct: 3 LRRLSSLLTVTVLASLTAGCILGPKYKRSQNAAIERPTAKGNFVSSQNKALTRMPDLPDH 62 Query: 52 WWESFNDTSLNKLVKIALQQN-------LTILQATERINAAKE--------NILSVRADL 96 WW +++ L+KL++ A N I ++T + A++ N + + Sbjct: 63 WWHLYDEPQLDKLIEEAFAHNNDLKVAAADITRSTAALARARDAKRIGTNLNTWANYIEF 122 Query: 97 FPSSYA--SISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 Y S++ IP+ S + S +++D GQ R IE++ A+ ++ + D+A+ Sbjct: 123 SDQRYLVNSVNRPHIPDAFATSLDAIIS-YQVDYLGQLHRAIEAANADEEAVRSAYDMAR 181 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + V + +Y++ I+I +++ L +++ L ++G + A+ Sbjct: 182 VTVAANTAQAYVEVCATGHDIAITKELIALAERSTALIARMRSEGRAMTTDARRQMAQEA 241 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 I++ +P ++ + +++ L G P EF + +P L PI +G L+ Sbjct: 242 QIKAALPQQVARKQVALFSLAVLTGRPPAEFPAEVANCEE--EPILRQPIPVGDGESLLN 299 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPKLY 331 RPDIR E +L + A+IG+A +++P ++L + T S F G+ ++ GP L Sbjct: 300 RRPDIRSAEYRLRSATAEIGVAMGEMWPKITLGATAGSTGMASHMFGGHTREFNLGPGLS 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + ++ I A+S + + +TVLNA+KE E ALT+ D L H E Sbjct: 360 WQVPNRNRARAEILAAKSETRIAAAQFDQTVLNALKETEAALTTYTHD------LDHRAE 413 Query: 392 LHKKSMSLSMIN------YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + + GR + L +LD +R + E L + +++ + +++A Sbjct: 414 VALARDRAAAADKDIHRLFSLGRINALPVLDADRTLLQYEQQLVSSDGKISDDQIRIFLA 473 Query: 446 IGSGYN 451 +G G++ Sbjct: 474 LGGGWS 479 >gi|189348257|ref|YP_001941453.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189338395|dbj|BAG47463.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 470 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 109/476 (22%), Positives = 218/476 (45%), Gaps = 46/476 (9%) Query: 13 VLLAGCTVGPEYTKPHMP----LLP--------TQFSIGNSKNLINID---TLKWWESFN 57 +LLAGCTVGP + P P +P +S ++ D T WW F Sbjct: 1 MLLAGCTVGPNFVPPPAPRVARFVPPDDPGAASGSWSGDGRTQALSTDAALTRDWWTRFG 60 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN 115 +++ V AL + T+ A + ++ + + + FP + AS S + L+T Sbjct: 61 SRAIDSTVAEALTGSPTLDLAEATLRRSEHALRAGQGIFFPQVDAQASASRQRAWPLRTG 120 Query: 116 S----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 T + +DL+G ++R +E+ A++D+ + A L + + ++ + Sbjct: 121 QALPASIFNLFTLSATVSYTLDLWGGEQRQVEALAADVDAQRQALAGAYLMLTANVVNTM 180 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +++ + +++ L + I L+ + T GA + ++++ LE++ S+E+ +P L++ Sbjct: 181 VARAAYRDEAAATREMIGLLDEQIRLTGAQVTAGAAAYVAVLTLESQRASLEAALPALDQ 240 Query: 225 SFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRY 280 R ++ LL YP + + + +P ++ P+ L+R RPDI Sbjct: 241 K-RAQADDLLALLAGRYPVD------WRTPDLSLDGIELPASLPDTAPSSLVRRRPDILQ 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E +L + A++G+A + LYP+L+L+ S + F WS G L PIF Sbjct: 294 AEAQLHVASAQVGVATAALYPNLTLSASGGFDSVVASKLFAPAGRAWSVGAGLTAPIFHG 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + + R A+ + E +++ VL+A +V + L ++ D + A+ + ++ Sbjct: 354 GTLLNRRRAAQDAYDEADAAYRQVVLSAFSQVADTLRALANDAMALDAQARAMAAARDAL 413 Query: 398 SLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y G Y L + D++ A++ ++A+R + V Y+A+G G+ Sbjct: 414 KLTQAGYDAGIAGYVQLLVADLQYHQARIAWLQTVAQRL--QDTVAFYVALGGGWG 467 >gi|58040540|ref|YP_192504.1| Outer membrane protein [Gluconobacter oxydans 621H] gi|58002954|gb|AAW61848.1| Outer membrane protein [Gluconobacter oxydans 621H] Length = 518 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 113/477 (23%), Positives = 218/477 (45%), Gaps = 56/477 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF------SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L CTVGP + KP +P F + ++ D WW F+D LN+LV+ A Sbjct: 33 LTACTVGPNF-KPDRIKVPDAFVEQPRPATADALAQSAADMKDWWAQFHDPMLNELVEQA 91 Query: 69 LQQNLTILQATERINAAK---------------------ENILSVRADLFPSSYASISHR 107 ++ N + A++ I A + ++ S+ D +P + S+R Sbjct: 92 IKGNYDLQIASQHIIAERAVRRQAQSAWYPQLDVAAGGGDDRYSINVDNWPIRPGNPSNR 151 Query: 108 FIPNLKTNSTGQLDSDWKIDLFG--------QRRHIESSLANLDSAYAQVDIAKLNVISK 159 P + G S W++DLFG ++R +E S+ N + L ++++ Sbjct: 152 --PEASVLTYGARAS-WEVDLFGHIARQVEERKRIVEESIENRRAVL-------LALLAE 201 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ R +ER+++ + +D+ ++ EL+ +T G + L++ + + E + + Sbjct: 202 MATDYVTLRSVQERLTVTERAIDVAVRSRELTEKLYTHGLGNTLAVAQAQTEEHLERARL 261 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDI 278 L + +H I+ L+G + ++K+ +P +P +P+ ++ NRPDI Sbjct: 262 APLHEQEERLMHAIAVLVGDMPGQLEEELEKR----RPIPDLPRFPDSLPSIVLANRPDI 317 Query: 279 RYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 R E + A A++GIA S+LYP L+ N + + + +F WSF LP+ Sbjct: 318 RVAEAEYAADTARVGIAVSNLYPKFMIPLTFNPNASAAY-QAFQAGGMAWSFMMMATLPV 376 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 G+ + I +A + A+ +T+++TVL A +VE+A+ + ++V +L A Sbjct: 377 IHGGRYTAAIAQARAEAEGSRLTYRKTVLKAFADVEDAMGDWRHNAELVEELNQASVDAG 436 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + G L++L E+ E + + ++ V LYIA+G+G+ Sbjct: 437 LARDRAQKLFTAGLTGYLNVLTTEQTALSAEDQAVVGRLARVRNAVALYIALGAGWQ 493 >gi|171316131|ref|ZP_02905356.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171098735|gb|EDT43529.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 480 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 210/461 (45%), Gaps = 43/461 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C++ P+ +P MP+ + + N L W F D L +L+++AL+ N + Sbjct: 19 CSMAPKLVRPRMPVPTAYTTAAAADQHANAADLGWRTMFGDRRLQRLIELALENNRDLRL 78 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---------HRFIPNLKTNSTGQLD-----SD 123 A + AA+ R+ PS A S + P L N+ Q S Sbjct: 79 AALNVQAAEAQYGIQRSARLPSIGAGASFTRQRTAADSQSNPPLLENTQNQYGVNVGVSA 138 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS----- 175 ++IDLFG+ + + D+A+A+ D + V L+ S +A +F ER++ Sbjct: 139 FEIDLFGRVKSLS------DAAFARYLATDHGRRAVQIALVGSVANA-YFAERLAQEQHA 191 Query: 176 IAHQILDLYKKNIELSH-LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + L+ ++++++L+ LK A S + + + E ++ S +D+ ++ + + Sbjct: 192 LSERTLNDWRQSLDLARRLKLADQA-SGVDIAQAEGQVASASADLEARSRAVEQAGNALR 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + L S QP + + G+P++L+ RPDI+ E+ L + A IG Sbjct: 251 LLVGTDLPKALP--DPLSLERQP-VMTQLPAGLPSELLYRRPDIQQAEQNLVAANADIGA 307 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P LSL SI + F G WSF P++ LPIF G+++S + AE Sbjct: 308 ARAAFFPRLSLTSSIGFLSPGLGSLFDGGQRVWSFAPQVTLPIFQGGRLRSELNLAEVRK 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++ + A +EV + L + + V+ ++ L + YR G Sbjct: 368 SSAVVEYERAIQTAFREVADGLAGRETFSRQIDAQSRVVKSAERRTDLVNLRYRAGIEDR 427 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R A + +DL A+ + V LY A+G G Sbjct: 428 LELLDSQRQLYAARQALLDLRNAE---LDNAVALYKALGGG 465 >gi|300901066|ref|ZP_07119179.1| putative outer membrane efflux protein OprM [Escherichia coli MS 198-1] gi|300355479|gb|EFJ71349.1| putative outer membrane efflux protein OprM [Escherichia coli MS 198-1] Length = 432 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 118/441 (26%), Positives = 211/441 (47%), Gaps = 30/441 (6%) Query: 29 MPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINA 84 MP+ P QFS+ N L+N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL-NQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQE 58 Query: 85 AKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI-E 136 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ E Sbjct: 59 ARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMSE 117 Query: 137 SSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 + N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 118 AERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQL 176 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 177 LTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVNS 232 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ T + Sbjct: 233 HSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTTSSD 292 Query: 316 SFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 +N W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +A Sbjct: 293 LSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADA 352 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLS 429 L ++ Q + + ++ + Y+ G S L++LD ER AT + +DL+ Sbjct: 353 LALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLN 412 Query: 430 IAKRQLAKSYVDLYIAIGSGY 450 A RQ+ + + LY A+G G+ Sbjct: 413 YA-RQVNE--ISLYTALGGGW 430 >gi|293610933|ref|ZP_06693232.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826585|gb|EFF84951.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 484 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 101/406 (24%), Positives = 200/406 (49%), Gaps = 15/406 (3%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFI 109 F D L ++ +AL N + AT I A++ + + P+ AS +S Sbjct: 61 FADPRLLGVIDLALANNRDLRTATLNIERAQQQYRITQNNQLPTIGASGSAIRQVSQSRD 120 Query: 110 PN--LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 PN T G + +++D +G+ R + +++L + S + D ++++IS++ ++++ Sbjct: 121 PNNPYSTYQVGLGVTAYELDFWGRVRSLKDAALDSYLSTQSARDSTQISLISQVAQAWLN 180 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +A Q L + + L+ +F G S++ L + + +++ +D+ + Sbjct: 181 YSFATANLRLAEQTLKAQQDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQI 240 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ L+G + L Q Q N++ G+P+DL+ NRPD++ E L+ Sbjct: 241 AQAQNLLNLLVGQSVPQNLLPTQPVKRITQQNVFT---AGLPSDLLNNRPDVKAAEYNLS 297 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG AK+ L+P++SL GS + F WS GP L LPIFD G ++N Sbjct: 298 AAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWSIGPSLDLPIFDWGTRRAN 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ +E+ + ++++V +A +EV +AL + + +T Q VE ++ +LS Sbjct: 358 VKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNAR 417 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R G S L +LD +R++ E L + ++ + ++LY +G G Sbjct: 418 FRAGIDSYLTVLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLGGG 463 >gi|21674109|ref|NP_662174.1| multidrug resistance protein FusA/NodT family [Chlorobium tepidum TLS] gi|21647265|gb|AAM72516.1| multidrug resistance protein, FusA/NodT family [Chlorobium tepidum TLS] Length = 475 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 116/477 (24%), Positives = 222/477 (46%), Gaps = 44/477 (9%) Query: 5 RAIFSLFIVLLA-----GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESF 56 RA+ L + LLA C+ EY +P + L P Q + G K + + K+ F Sbjct: 10 RAVPLLLMTLLATIGLTACSPVGEYRRPEVRLPESYPGQTAAG--KEMAAVPYRKF---F 64 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFI 109 D L +L+ A++ N +L A + I+ A + + + P Y+ S Sbjct: 65 ADPDLLELIDSAVENNHDLLIAMKNIDYAGKTLDVAKLWFLPEVDLSATYDYSRGSRNSA 124 Query: 110 PNLKT------NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKL 160 LK N T QL+ W+ D++ + R+ + A + D+A+ ++S + Sbjct: 125 SALKGQARTSRNYTAQLNVSWEADIWAKLRNAKK--AAVAEYLRSADVARAVRTTLVSNV 182 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y + + E+I I + + L + + L+F G + L++ + E+++ S ++ +P Sbjct: 183 AQGYWNLKMLDEQIDITKRNIALADTTLTMMRLQFDAGNVTSLAVDQQESQLLSAKATLP 242 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPD 277 LE S + +S L G P T ++S + P +P + G+P L+ NRPD Sbjct: 243 KLEASRTAQENALSILAGRMPGTPI-----RRSTGYAP-FVMPDSLGAGVPLALLSNRPD 296 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLP 333 +R E+ L ++ A G+ K+ +YPS+++ L S ++T S L P Sbjct: 297 VRAAEESLMEAHALTGVNKAMMYPSITITAQGGLNAIESSKWFSTPGSLFNALQGSLLQP 356 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G++K+ +++ + +T+++T+L A+ EV NAL + + + T + V Sbjct: 357 IFQHGQLKAQYEQSKIKRDQAELTFRKTLLVAVGEVSNALAQVEKTGEQETFAKARVAAL 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+ S + + G + L+++ E + + E++L+ +R + DLY A+G G+ Sbjct: 417 RKAAGNSRLLFNSGMATYLEVIAAESSLLQSELELADVQRSRLSAIADLYRAVGGGW 473 >gi|333008224|gb|EGK27699.1| cation efflux system protein cusC [Shigella flexneri VA-6] Length = 408 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 105/383 (27%), Positives = 185/383 (48%), Gaps = 28/383 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPVMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKMEIPIFNAGRNQANLDIAEIRQ 359 Query: 352 QEQYITWQETVLNAIKEVENALT 374 Q+ + +++ + NA KEV +AL Sbjct: 360 QQSVVNYEQKIQNAFKEVADALA 382 >gi|114047610|ref|YP_738160.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-7] gi|113889052|gb|ABI43103.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-7] Length = 489 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 124/482 (25%), Positives = 218/482 (45%), Gaps = 58/482 (12%) Query: 14 LLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LL GC++ P+Y P + + PT+ G S ++ WW FND LN LV Sbjct: 14 LLGGCSMSPDYAPPKVKVSELYLNAPTE---GVSTEGVSYQA--WWHKFNDPQLNALVAK 68 Query: 68 ALQQNLTILQATERINAA----------KENILSVRADLF-------------------- 97 A QQN+++ A+ER+ AA K +SV A Sbjct: 69 AQQQNISLQIASERVRAARAYQAAVSSLKVPTISVGAGYLDMRISENDPLMGGAVGGIGL 128 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI 157 P S + + ++T W+ DLFG+ + S A + + AQ+ A L + Sbjct: 129 PDSLGGGKLKLMNRDPNSTTVGATIAWEADLFGRIASL-SQAAEIRAEQAQLYRANLATL 187 Query: 158 --SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++I +Y+ R +ER++IA Q + + + L G S L + A + + Sbjct: 188 MTAEVIDNYLQYRGTQERMTIARQNIAEQAEVLALVESLERNGYGSPLDVANARAALAAS 247 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E+ +P L + + ++H ++ LLG TE + S P + I G+P++L+ R Sbjct: 248 EAMLPMLSSAEQAHLHRLAILLGENLTETSGRL---SAAALPAMKQFIPTGVPSELLTRR 304 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYL 332 DI E+++A ++G A + YPS L G+ L+ D+ F + W+ G + Sbjct: 305 LDIAIAEREMAAKNQELGAAIAAKYPSFFLTGAPGLSADHIDDLFSSDSLTWALGAGVSW 364 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KIVTKLQHA 389 +FD G+ ++ + E+ + +++Q+ V NAI EVE L ++ + + K + Sbjct: 365 NVFDGGRTQAMVEIQEAGFKTAALSYQQAVNNAINEVETVLKHYGNNQQYHRFIAKAEAQ 424 Query: 390 VELH-KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 E+ +K+ SL YR G + L +L+ + ++ +A+ Q A S V LY A+G Sbjct: 425 SEIAVQKATSL----YRAGLENHLSVLNAQNVKNNMQDAEVLARLQTASSVVSLYKALGG 480 Query: 449 GY 450 + Sbjct: 481 DW 482 >gi|197118748|ref|YP_002139175.1| RND family efflux pump outer membrane lipoprotein [Geobacter bemidjiensis Bem] gi|197088108|gb|ACH39379.1| efflux pump, RND family, outer membrane lipoprotein [Geobacter bemidjiensis Bem] Length = 474 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 210/466 (45%), Gaps = 35/466 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNS-----------KNLINIDTLKWWESFNDT 59 ++ LAGC ++ P+Y KP P+ P + G S K L + W E F D Sbjct: 14 LLFLAGCASMAPKYEKPAPPV-PNAWPTGPSYKEGQAAKAEQKPLAEV---PWQEFFLDP 69 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPN-LKTNS 116 L K++ IAL N + A + + RADL P + A +S + P+ L N Sbjct: 70 QLRKVIGIALNNNRDLRVAVLNMERFRALYQIQRADLLPQVNGNAGLSVQRTPDDLSNNG 129 Query: 117 TG----QLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G Q D S +++DLFG+ R + + +L S ++ ++S++ +Y+ Sbjct: 130 NGRTVHQYDVGVGISSYELDLFGRVRSLKDQALEEYLSTEQARRSVQITLVSQVATAYLA 189 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +R+ +A L +++ +LS+ +F G S L L + + + + DI Sbjct: 190 LASDLDRLKLAKDTLANQQESYKLSNSRFQAGVASALDLQQAQTSVDAARVDIARFTTFV 249 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +++ ++ ++G L S N P + G+P+D++ RPDI E L Sbjct: 250 AQDMNALNLVVGSSVGSDL-LPASLSENLTP--IKDLAPGLPSDVLLARPDILQAEYLLR 306 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P ++L S+ D F N WSF P++ +PIF+ G+ K+N Sbjct: 307 GANANIGAARAAFFPRITLTSSVGFGSDQLTGLFKPGNFAWSFAPRITVPIFEGGRNKAN 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ A+ +++ + A +EV +AL + V+ ++ LS Sbjct: 367 LQVAQVDRDIAVAQYEKAIQTAFREVADALAQQGTIDEQVSAQHSLTGATAETFRLSQAR 426 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y+ G S L++LD +R+ + +L A+ + V LY +G G Sbjct: 427 YQTGIDSYLNVLDAQRSLYAAQQNLITARLVRLSNQVTLYRVLGGG 472 >gi|242239928|ref|YP_002988109.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya dadantii Ech703] gi|242131985|gb|ACS86287.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya dadantii Ech703] Length = 465 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 110/472 (23%), Positives = 216/472 (45%), Gaps = 28/472 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLKWWES 55 M ++ I + ++LL+GCT+ P Y +P P+ P + G + + + + W E Sbjct: 1 MRVIAGIVT-GVMLLSGCTLAPHYQRPSAPV-PENWPQGAAYQTASPAGRAANDIPWREV 58 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 D L ++V +AL N ++ +A + AA+ RADL PS A++ L ++ Sbjct: 59 MVDARLRQVVDMALSDNRSLRKAIADMEAARALYGEQRADLAPSLNATLDGTRSRALNSS 118 Query: 116 STGQLDSD----------WKIDLFGQRRHIESSLANLDSAYAQVDIA---KLNVISKLIP 162 +G S + +DLFG+ R + A L++ A + A +L +I+ Sbjct: 119 GSGTSLSQSYSAGLSVSAFSLDLFGKNRSLTG--AALETYLASAETATSTRLTLIADSAT 176 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++ + +++A Q + +++ ++ + G S + + + E + +D+ + Sbjct: 177 AWVTLATARSDLALARQTMASAGQSLAVTRSRQRNGVASAVDVAQSETVYQQARADVASA 236 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + + L G P E L +S + P+ GI + ++ RPD++ E Sbjct: 237 LTTEAQSRNALDLLAGRPVPEALLPDSLESVS---GAVAPVAAGISSTVLLRRPDVQAAE 293 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGS--IALTHDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 L + A IG A++ +PS++L S I + +S + + WS P + LPIFD G Sbjct: 294 HTLKSANANIGAARAAFFPSITLTASNGIGSSELSSLFRHGSRVWSVVPGVSLPIFDGGA 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 S +R AE+ + ++++ V A +V +AL + + Q V ++S L Sbjct: 354 NLSALRYAEAEKKGYIASYEKAVQTAFSDVADALARKGTLAEQQSAQQDYVSAAQRSYQL 413 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR+G + L++LD +R L ++ + + LY A+G G + Sbjct: 414 ASSRYREGVDTYLNVLDAQRTLYSARQSLISLEQSRLNNLITLYNALGGGVD 465 >gi|237730524|ref|ZP_04561005.1| copper/silver efflux system outer membrane protein CusC [Citrobacter sp. 30_2] gi|226906063|gb|EEH91981.1| copper/silver efflux system outer membrane protein CusC [Citrobacter sp. 30_2] Length = 460 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 114/457 (24%), Positives = 221/457 (48%), Gaps = 28/457 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI-----DTLKWWESFNDTSLNKLVK 66 I +LAGC++ P+Y +P +P+ P QFS+ + +L++ DT W F D + L+ Sbjct: 12 IFVLAGCSLAPDYQRPALPV-PQQFSL-SQNSLVSAPGEYQDT-GWRTFFVDDQVKALIG 68 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQL 120 AL N + AT ++ A+ AD +P A S + LK +S+ L Sbjct: 69 EALINNRDLRMATLKVQEARAQYGVTDADRYPQITAGSSGTYSGKLKGDSSTDREFEAGL 128 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + + +D FG+ +++ E+ N ++ + +IS + SY + R ++ +A + Sbjct: 129 NLSFDLDFFGRLKNMSEAERQNFFASEEARRAVHILLISNVSQSYFNQRLAYAQLQVAEE 188 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L Y+++ + G+T+ L+L + I+S S+I + + + LLG Sbjct: 189 TLQNYQRSYAFVEKQLITGSTNVLALEQARGVIESTRSEIAKRKGELAQANNALQLLLGT 248 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + + + +P P + + ++ RPDI E L + A IG A++ Sbjct: 249 YG-KLPDDQARSRGDIKPVTLPP---SLSSQILLQRPDIMEAEHGLLAANANIGAARAAF 304 Query: 300 YPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS++L S++ + N F + W+F PK+ +PIF+ G+ +SN+ AE Q+ + Sbjct: 305 FPSITLTSSVSSSSSDLSNLFNASSGMWNFVPKIDIPIFNAGRNQSNLDLAEIRQQQSVV 364 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++ + NA KEV +AL ++ Q ++ + ++ + Y+ G S +++LD Sbjct: 365 NYEQKIQNAFKEVADALVLRQSIADQISGQQRYLDSLQITLQRARALYQNGAVSYIEVLD 424 Query: 417 IER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ A++ + + L+ A+G G+ Sbjct: 425 AERSLFATRQSLLDLNYAQQ---VNEIKLFAALGGGW 458 >gi|113970201|ref|YP_733994.1| RND efflux system outer membrane lipoprotein [Shewanella sp. MR-4] gi|113884885|gb|ABI38937.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. MR-4] Length = 489 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 124/482 (25%), Positives = 217/482 (45%), Gaps = 58/482 (12%) Query: 14 LLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LL GC++ P+Y P + + PT+ G S + WW FND LN LV Sbjct: 14 LLGGCSMSPDYAPPKVKVSELYLNAPTE---GVSTEGVGYQA--WWHKFNDPQLNALVAK 68 Query: 68 ALQQNLTILQATERINAA----------KENILSVRADLF-------------------- 97 A QQN+++ A+ER+ AA K +SV A Sbjct: 69 AQQQNISLQIASERVRAARAYQAAVSSLKVPTISVGAGYLDMRISENDPLMGGAVGGIGL 128 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI 157 P S + + ++T W+ DLFG+ + S A + + AQ+ A L + Sbjct: 129 PDSLGGGKLKLMNRDPNSTTVGATIAWEADLFGRIASL-SQAAEIRAEQAQLYRANLATL 187 Query: 158 --SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++I +Y+ R +ER++IA Q + + + L G S L + A + + Sbjct: 188 MTAEVIDNYLQYRGTQERMTIARQNIAEQAEVLALVESLERNGYGSPLDVANARAALAAS 247 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E+ +P L + + ++H ++ LLG TE + S P + I G+P++L+ R Sbjct: 248 EAMLPMLSSAEQAHLHRLAILLGENLTETSGRL---SAAALPAMKQFIPTGVPSELLTRR 304 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYL 332 DI E+++A ++G A + YPS L G+ L+ D+ F + W+ G + Sbjct: 305 LDIAIAEREMAAKNQELGAAIAAKYPSFFLTGAPGLSADHIDDLFSSDSLTWALGAGVSW 364 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KIVTKLQHA 389 +FD G+ ++ + E+ + +++Q+ V NAI EVE L ++ + + K + Sbjct: 365 NVFDGGRTQAMVEIQEAGFKTAALSYQQAVNNAINEVETVLKHYGNNQQYHRFIAKAEAQ 424 Query: 390 VELH-KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 E+ +K+ SL YR G + L +L+ + ++ +A+ Q A S V LY A+G Sbjct: 425 SEIAVQKATSL----YRAGLENHLSVLNAQNVKNNMQDAEVLARLQTASSVVSLYKALGG 480 Query: 449 GY 450 + Sbjct: 481 DW 482 >gi|323529592|ref|YP_004231744.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323386594|gb|ADX58684.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 518 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/431 (24%), Positives = 205/431 (47%), Gaps = 38/431 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 CTVGP+Y +P + PT ++ + S ++ D WW ++D +L L AL Sbjct: 25 CTVGPDYKRPQAEV-PTAWNTDSYWRVAAPSHAPMDPD---WWNVYHDATLAALETQALA 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYASISHRF------------IPNLKT-NS 116 QN T++ A+ AK + + RA P A+ + RF P + T + Sbjct: 81 QNQTLVAASAHYAQAKATLANTRAQQMPEVDLAASASRFRISQDRPRTNYATPTVSTVQN 140 Query: 117 TGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 QL + DLFG+ RR +E ++A+ + + + A+L + +++ Y R Sbjct: 141 NLQLGPAVSYDTDLFGRIRRQVEGAMASAEQSADDLANARLILTTEVASDYFSLRELDTE 200 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I + +Q + L +K ++ + + GA S L + + ++ + + L H I Sbjct: 201 IDVLNQSVKLQQKALDYVNAEHELGAVSGLDVAQQKSLLDTTRVQAQLLLNQRAQYEHAI 260 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G A +F ++ + FQ +P I +G+P+DL++ RPDI E+ +A + A+I Sbjct: 261 AALVGVSAPQFA--IEPKVLTFQ----VPAIALGVPSDLLQRRPDIASAERAMAAANAQI 314 Query: 293 GIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+AK+ +PSL+L I A + W+ G +FD G+ +N++ A Sbjct: 315 GVAKAAFFPSLTLTPGIGWEATQFSSLLSAPTLMWTLGAAAGQVLFDGGRRAANVQYASE 374 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +++TVLNA ++V++ +T + V + + AV ++ + L+ Y G Sbjct: 375 GYKATEANYRQTVLNAFQQVQDGITGLAVLDGAVKQSEEAVADAQRLLGLANDRYSGGLV 434 Query: 410 SLLDILDIERA 420 + L+++ +++ Sbjct: 435 AYLNVITAQQS 445 >gi|289625707|ref|ZP_06458661.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 306 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 158/305 (51%), Gaps = 23/305 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVT--APAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKE----------NILSVRA--DLFPSSYASISHRFIPNLKT 114 +L N + A R+ AA+ +++ RA DL ++ R + N + Sbjct: 67 RSLDGNRDLRVAFARLKAARAIRDDVANDAMPVITSRASSDLGKGQQPGVTERRV-NSER 125 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 G LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R Sbjct: 126 YDLG-LDMAWEVDLFGRIQRQLEASNADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLR 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +IA L + + +++ G ++L +V+ EA + ++E+ +P L+ + I Sbjct: 185 EAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQVRQRNRI 244 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TLLG + S + P + + IG P ++RNRPDIR E++LA S A+IG Sbjct: 245 ATLLGERPENLSVDL---SPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIG 301 Query: 294 IAKSD 298 +A +D Sbjct: 302 VATAD 306 >gi|325123250|gb|ADY82773.1| outer membrane factor, OMF family [Acinetobacter calcoaceticus PHEA-2] Length = 483 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 101/406 (24%), Positives = 200/406 (49%), Gaps = 15/406 (3%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFI 109 F D L ++ +AL N + AT I A++ + + P+ AS +S Sbjct: 60 FADPRLLGVIDLALANNRDLRTATLNIERAQQQYRITQNNQLPTIGASGSAIRQVSQSRD 119 Query: 110 PN--LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 PN T G + +++D +G+ R + +++L + S + D ++++IS++ ++++ Sbjct: 120 PNNPYSTYQVGLGVTAYELDFWGRVRSLKDAALDSYLSTQSARDSTQISLISQVAQAWLN 179 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +A Q L + + L+ +F G S++ L + + +++ +D+ + Sbjct: 180 YSFATANLRLAEQTLKAQQDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQI 239 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ L+G + L Q Q N++ G+P+DL+ NRPD++ E L+ Sbjct: 240 AQAQNLLNLLVGQSVPQNLLPTQPVKRITQQNVFT---AGLPSDLLNNRPDVKAAEYNLS 296 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG AK+ L+P++SL GS + F WS GP L LPIFD G ++N Sbjct: 297 AAGANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWSIGPSLDLPIFDWGTRRAN 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ +E+ + ++++V +A +EV +AL + + +T Q VE ++ +LS Sbjct: 357 VKISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNAR 416 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R G S L +LD +R++ E L + ++ + ++LY +G G Sbjct: 417 FRAGIDSYLTVLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLGGG 462 >gi|268592131|ref|ZP_06126352.1| cation efflux system protein CusC [Providencia rettgeri DSM 1131] gi|291312529|gb|EFE52982.1| cation efflux system protein CusC [Providencia rettgeri DSM 1131] Length = 464 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 106/456 (23%), Positives = 224/456 (49%), Gaps = 23/456 (5%) Query: 11 FIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESF-NDTSLNKLV 65 + + L GC ++ PEY +P++ L P QF+ S T + WE F D + ++ Sbjct: 11 YALTLTGCVSLAPEYQRPNLNL-PHQFNSHVSDAAKQAQTELLIPSWEQFIQDPQMKNVI 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------ 119 +IAL++N + A + A+ A+ +P +S+S + +L++ S+ Sbjct: 70 EIALEKNSDLYLAALDVEEARVRFGLAGAEKYPQVNSSMSGDYSQSLESGSSFNKKYSVG 129 Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +D +++D FG+ +++ ++ A ++ ++ I + +Y+D + ++ + IA Sbjct: 130 IDISYELDFFGRIKNLSDADKAKFIASQEMSRATQIITIKTVAEAYLDVVYNQKLLLIAQ 189 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + Y + + K G + L + + +++SI +I +E N LL Sbjct: 190 ETKQSYLNSQSIVMQKVAAGKAALSDLEQAKGQVQSISINIEKIESEIAKN----ENLLN 245 Query: 239 YPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + ++ + ++PN I IP++++ RPDI E+ + A IG+A++ Sbjct: 246 FLTNDYATKINLDLGRYEPNYPLITTPPDIPSEILLKRPDIMAAEQNIISENANIGVARA 305 Query: 298 DLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS+S N +A ++D+ F N W+F PK+ LPIF G N+ A + Sbjct: 306 AFFPSISFNTGVANSNDSLTGLFDSSNGIWNFIPKITLPIFTGGTNSRNLELANIRKNKA 365 Query: 355 YITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ A +EV++AL ++ +K+++++ Q+ V + ++ +YR G S LD Sbjct: 366 IANYEKSIQVAFREVKDALVIKLSLEKQLISQEQY-VNTLQNVLTQKQASYRYGGLSYLD 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +L+ +R+ + +L + K + K+ ++L+ A+G G Sbjct: 425 VLEAQRSLFTEQQNLLMLKIEQQKNEINLFSALGGG 460 >gi|91776723|ref|YP_546479.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91710710|gb|ABE50638.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 482 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 109/471 (23%), Positives = 223/471 (47%), Gaps = 43/471 (9%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 + +L GC+ PE P +P+ + D L +WW+ + D L+ L + Sbjct: 12 MLAVLGGCSFAPELKLPEVPVAQAYKEMQPWVPAAPADQLPRGEWWKLYGDAELDALQEK 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYAS--------ISHR-------FIPNL 112 + + + A R A RADLFPS A+ HR IP Sbjct: 72 LVAHSPDLSAALARYQQALAYSEQARADLFPSLSANGQAGRNRVSEHRPLVPPNAVIPPT 131 Query: 113 KTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +N + L + +++DL+G+ R+ +++ +A + A ++ +L++ ++L ++I R Sbjct: 132 YSNYSIGLQASYELDLWGRVRNTVKAGVAEAAAMQADLESVRLSLQAQLTDNFIVLRGLD 191 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++ I + + K + ++ + G L + + EA++++ S + + H Sbjct: 192 QQLHILEETVQANDKALSITKARHEGGIVPGLDVSRAEAQLETARSQLAQARAQRAVVEH 251 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ L+G + F + + + +P + G+P+ L++ RPDI ++++A + A Sbjct: 252 AIAALVGESPSNFAIASRLDT------IALPHVPPGLPSTLLQRRPDIAAAQRRVAAANA 305 Query: 291 KIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG+A++ +P+LSL+ + ++ N + WS GP + +FD G+ K+ + +A Sbjct: 306 SIGVARTAYFPALSLSAAFGYQSISTGNWLTAPSNFWSIGPGMLFQLFDGGRRKAQLAQA 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ E ++ VL A ++VE++L ++ + Q A E +KSM+ +M YR+G Sbjct: 366 EAVLNETGARYRGVVLEAFQQVEDSLVRLHHYQAAADAEQAAAEAAQKSMAFAMNRYREG 425 Query: 408 RYSLLDI-------LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L++ L+ +RA ++V QL ++ V+L A+G + Sbjct: 426 AANYLEVTAAQTQALETQRAVVTLKVS------QL-RTSVELIRALGGDWQ 469 >gi|119898861|ref|YP_934074.1| outer membrane efflux protein [Azoarcus sp. BH72] gi|119671274|emb|CAL95187.1| probable outer membrane efflux protein [Azoarcus sp. BH72] Length = 508 Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 216/475 (45%), Gaps = 54/475 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWWESFNDTSLNKL 64 GC++ P Y +P + P F + +WW F D +LN L Sbjct: 24 GCSMAPVYERPEV-ATPAAFKEADPALEAAAAKWKTAAPADDQHRGEWWRIFGDDTLNAL 82 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIP----------- 110 AL N + A R+ A+ S R++ P +S+ R P Sbjct: 83 EAEALAANQDLKAAVARLAQARALEGSARSERLPQIDASFGPTRQRPSPASQGLDEDASV 142 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + +T Q+ +++DLFG+ ++++ A+ A + +L + + + +Y R Sbjct: 143 SPRTLWRAQVGIGYEVDLFGRVASSVDAAGADTQQREALLRSVQLALQADVAQAYFLLRE 202 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ +DL + ++L +F G +L + + E+ S +S+ + + Sbjct: 203 LDAEQALFRATVDLRGEALKLVQRRFEAGDIGELDVARARTELASAQSEAHGIARRRAAA 262 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLAD 287 H ++ LLG P EF S QP I + + G+P+ L+ RPDI E+ +A Sbjct: 263 EHALAILLGKPPAEF-------SFAAQPLARITVGVPAGLPSALLERRPDIAAAERAMAA 315 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGP----KLYLPIFDKG 338 + A+IG+A++ +P LSL G AL ++++ G WS GP L +PIFD G Sbjct: 316 ANARIGVARAAFFPRLSLTG--ALGYESAELGDLFQWSSRTFLLGPLVGGVLSMPIFDGG 373 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++++ RA + +E +++TVL A +EVE+ L ++ + AV +++ Sbjct: 374 RRQADLDRARAVYEEDVARYRQTVLGAFREVEDGLANLRILGRQTQAQDEAVAASERAAR 433 Query: 399 LSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS + YR+G S +++D +R+ +V V L + A+S V L A+G G+ Sbjct: 434 LSQLQYREGATSYFEVIDADRSVLQQRRVAVQLDGER---ARSTVALIRALGGGW 485 >gi|238828134|pdb|3D5K|A Chain A, Crystal Structure Of The Oprm Channel In A Non-Symmetrical Space Group gi|238828135|pdb|3D5K|B Chain B, Crystal Structure Of The Oprm Channel In A Non-Symmetrical Space Group gi|238828136|pdb|3D5K|C Chain C, Crystal Structure Of The Oprm Channel In A Non-Symmetrical Space Group Length = 474 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 41/459 (8%) Query: 22 PEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQQNLTIL 76 P+Y +P P+ P + G + + + W E F D L +L+ +AL+ N + Sbjct: 5 PDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALENNRDLR 64 Query: 77 QATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLDSD---------W 124 A + A + RADLFP + R +L T + + S W Sbjct: 65 VAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLGTTAW 124 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ R + A Q A+ +++ + +Y+ + + ++ + L Sbjct: 125 ELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKDTLGT 184 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----G 238 Y+K+ +L+ + G S L L + + ++E TL + R+ + + L+ G Sbjct: 185 YQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLAQYTRLVAQDQNALVLLLGSG 241 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 PA Q L + G+P+DL++ RPDI E +L + A IG A++ Sbjct: 242 IPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLMAANASIGAARAA 295 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS+SL G+++ F + W F P + LPIF G +++++ A+ Sbjct: 296 FFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINV 355 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS---MSLSMINYRQGRYSLL 412 +++ + A +EV + L + +LQ +L K S L+ YR G + L Sbjct: 356 AQYEKAIQTAFQEVADGLAARG---TFTEQLQAQRDLVKASDEYYQLADKRYRTGVDNYL 412 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R+ + L + S V+LY A+G G+N Sbjct: 413 TLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWN 451 >gi|187479510|ref|YP_787535.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] gi|115424097|emb|CAJ50650.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] Length = 478 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 101/426 (23%), Positives = 198/426 (46%), Gaps = 36/426 (8%) Query: 16 AGCTVGPEYTKPHMPL--------------LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 AGC VGP+Y +P + + P Q + + +WW + D L Sbjct: 20 AGCAVGPDYQRPEIDVGTAYKDDPQSLPGWQPAQPADAAGRG-------QWWRIYGDPVL 72 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ 119 + L+ N TI QA A+ + R+ FP+ + A ++ + ++ Sbjct: 73 DGLMTRLEAANQTIAQAEANYRQAQALVGVARSGFFPTVGANAGVTRSSSSSGGVSNQYA 132 Query: 120 LDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W+ DL+G+ RR +ESS A+ ++ A + +L+ + L +Y+ R E+ + Sbjct: 133 LSGNVSWEADLWGRLRRELESSRASEEAVAADLAATRLSAEAALAQNYMQLRVLDEQKRL 192 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + Y++++ L+ ++ G K + + +++S + + L+ + I+ L Sbjct: 193 LQATVQAYERSLTLTRNRYEAGVAGKSDVAVAQTQLESTRAQLVDLDWQRGQYENAIAVL 252 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G ++F + + P I +G+P+ L++ RPD+ E+++A + AKIG+A+ Sbjct: 253 IGVAPSQFALPPEPFTQQL-PQ----IPLGLPSALLQRRPDVAAAERRVAAANAKIGVAQ 307 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P L+L+ S D F + T WS GP L + IFD G ++ I A + Sbjct: 308 AAWFPDLTLSASGGF-RDGQFAQWLTAPARFWSLGPALAMTIFDGGAREAQIASARAGYD 366 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 Q +++ VL A++EVE+ L + + + A+E ++S+ L+ Y G L Sbjct: 367 SQAAAYRQAVLMALREVEDYLVQLRVLGQEQDVQRRALESARESLRLTRNQYEAGLVDYL 426 Query: 413 DILDIE 418 ++ +E Sbjct: 427 NVAVVE 432 >gi|58000302|ref|YP_190196.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli] gi|57903214|gb|AAT37591.2| outer membrane efflux protein [Escherichia coli] Length = 461 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 109/462 (23%), Positives = 226/462 (48%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + ++ + W F D + +L+ Sbjct: 12 IFILAGCVSLAPEYQRPAAPV-PQQFSLSRNSLTPAVNGYQDTGWRNFFVDPQVTRLITE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 LSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAKANNALQLVLG 248 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P+ + + + PNL + ++ RPDI E +L + A IG Sbjct: 249 TYRALPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGA 300 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Sbjct: 301 ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + +A K+V + L + + + Q ++ + ++ + Y G S Sbjct: 361 QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSY 420 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 421 IEVLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|120601549|ref|YP_965949.1| RND efflux system outer membrane lipoprotein [Desulfovibrio vulgaris DP4] gi|120561778|gb|ABM27522.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris DP4] Length = 546 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 111/493 (22%), Positives = 209/493 (42%), Gaps = 61/493 (12%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNS-------------------------------- 41 ++ GCT+ PEY +P P +P+ ++ G Sbjct: 23 VVGGCTLAPEYRRP-APSMPSAWNAGQDVAPGAGQVAQVAAQAPDAAAPAGASGASAHSG 81 Query: 42 -------KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA 94 + T W + D + +LV +AL N + A +I A+ RA Sbjct: 82 AQPDAQPGAQPAMQTPDWRQVVVDAPMARLVDVALSSNRDLRVAVLQIEKARAQHAIARA 141 Query: 95 DLFP---SSYASISHRFIPNLKTNSTGQLD---------SDWKIDLFGQRRHI-ESSLAN 141 DLFP +S A + R +L G + S +++DLFG+ R + E +L Sbjct: 142 DLFPHIDASGAGNAGRTAQSLSPTGEGYVSHAYTVGVGFSAYELDLFGRVRSLKEQALER 201 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 S A +L +++++ +Y+ +E++++A +IL+ + + E+ ++ G Sbjct: 202 FLSTDAAARSVQLTLVAEVGQAYLTLVADREQLALAREILETEQASFEVVQSRYGHGIAG 261 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 +L + + + + ++ E + + ++ LLG P T + + + P + Sbjct: 262 ELDVARARTTVDTARVNVAAAEAKVTADENALALLLGTPVTPDMVPACRLVD-VVPLADV 320 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFP 318 P G+P++++ RPD+ E L + A IG A++ +P + L G+ + +N F Sbjct: 321 PA--GVPSEVLTRRPDVVAAEHALKAANANIGAARAQFFPRIGLTASYGNASNDMENLFR 378 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 WSF P++ LPIF G I++ + AE+ +++ V A +EV + L Sbjct: 379 AGAHTWSFVPQVTLPIFHAGAIRAGVETAEADRDIYVAQYEKAVQTAFREVSDTLAQ-GR 437 Query: 379 DKKIVTKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + T Q + VE S SL+ Y G LD +D +R+ A +L Sbjct: 438 SLAVQTGAQTSLVEATATSYSLASKRYESGIAGYLDKIDAQRSYAVARQNLIAMHLARQN 497 Query: 438 SYVDLYIAIGSGY 450 + + L+ A+G G+ Sbjct: 498 NRLTLFKALGGGW 510 >gi|312172025|emb|CBX80282.1| putative HAE1 family transporter [Erwinia amylovora ATCC BAA-2158] Length = 459 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 214/457 (46%), Gaps = 33/457 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L GC E +P+ PTQ+ +G + WW +F+D LN+LV+ AL+ N Sbjct: 17 LTGCATHVERAPSSLPI-PTQWRNQVGPGAAV----EAGWWHAFHDPVLNQLVEQALRHN 71 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---RFI------PNLKTNSTGQLDSD 123 IL A R++ + + D FP+ A ++ R I P + G L ++ Sbjct: 72 PDILIARSRVDQYRAQLRGAEGDNFPTLDAGMAGSRARAISAVTGQPYPYSVVQGLLQAN 131 Query: 124 WKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 + +DL+G+R I+++ A L + A A L + S + Y+ E++ + L Sbjct: 132 YNVDLWGERSSSIDAAKATLAAQQAAAAAAGLTIASSVASGYMTLASLDEQLRVTEATLA 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +++L+ +F G +S+L ++ ++E ++ ++ IP L+ + +S L+G Sbjct: 192 SRNDSLKLAQRQFETGYSSRLEWLQSQSEYQTAKAQIPLLQHQIAEQENALSILVGMNPR 251 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q F+ + + +P+ L++ RPDI E++L + A + A++ L PS Sbjct: 252 QIARQHQ-----FEHPVAQTMPTVMPSRLLQRRPDIVQAERQLLAADASLQSARASLLPS 306 Query: 303 LSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+L S L DN F WS G + P+ ++ + + + + ++ + Sbjct: 307 LNLTASGTLQSSVLHQLIDNPF----RLWSVGGSILAPLLNREALTAQVDVSMATRNQAL 362 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ V A EV N L +I ++ +L ++ ++++ ++ Y+ G S LD L Sbjct: 363 YNYEKVVRAAFSEVNNDLDAITRYQQQQNELLIQQQVAQEALRIARKRYQNGYASYLDEL 422 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 D +R ++ + AK L + +DLY A+G G+ P Sbjct: 423 DAQRTLFTTQLSVVRAKNNLLLAQIDLYRALGGGWQP 459 >gi|58039855|ref|YP_191819.1| Outer membrane channel protein [Gluconobacter oxydans 621H] gi|58002269|gb|AAW61163.1| Outer membrane channel protein [Gluconobacter oxydans 621H] Length = 518 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 112/477 (23%), Positives = 218/477 (45%), Gaps = 56/477 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF------SIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L CTVGP + KP +P F + ++ D WW F+D LN+LV+ A Sbjct: 33 LTACTVGPNF-KPDRIKVPDAFVEQPRPATADALAQSAADMKDWWAQFHDPMLNELVEQA 91 Query: 69 LQQNLTILQATERINAAK---------------------ENILSVRADLFPSSYASISHR 107 ++ N + A++ I A + ++ S+ D +P + ++R Sbjct: 92 IKGNYDLQIASQHIIAERAVRRQAQSAWYPQLDVAAGGGDDRYSINVDNWPLRPGNTANR 151 Query: 108 FIPNLKTNSTGQLDSDWKIDLFG--------QRRHIESSLANLDSAYAQVDIAKLNVISK 159 P + G S W++DLFG ++R +E S+ N + L ++++ Sbjct: 152 --PEASVLTYGARAS-WEVDLFGHIARQVEERKRIVEESIENRRAVL-------LALLAE 201 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ R +ER+++ + +D+ ++ EL+ +T G + L++ + + E + + Sbjct: 202 MATDYVTLRSVQERLTVTERAIDVAVRSRELTEKLYTHGLGNTLAVAQAQTEEHLERARL 261 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDI 278 L + +H I+ L+G + ++K+ +P +P +P+ ++ NRPDI Sbjct: 262 APLHEQEERLMHAIAVLVGDMPGQLEEELEKR----RPIPDLPRFPDSLPSIVLANRPDI 317 Query: 279 RYQEKKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 R E + A A++GIA S+LYP L+ N + + + +F WSF LP+ Sbjct: 318 RVAEAEYAADTARVGIAVSNLYPKFMIPLTFNPNASAAY-QAFQAGGMAWSFMMMATLPV 376 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 G+ + I +A + A+ +T+++TVL A +VE+A+ + ++V +L A Sbjct: 377 IHGGRYTAAIAQARAEAEGSRLTYRKTVLKAFADVEDAMGDWRHNAELVEELNQASVDAG 436 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + G L++L E+ E + + ++ V LYIA+G+G+ Sbjct: 437 LARDRAQKLFTAGLTGYLNVLTTEQTALSAEDQAVVGRLARVRNAVALYIALGAGWQ 493 >gi|317052085|ref|YP_004113201.1| RND efflux system outer membrane lipoprotein [Desulfurispirillum indicum S5] gi|316947169|gb|ADU66645.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfurispirillum indicum S5] Length = 468 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 108/466 (23%), Positives = 223/466 (47%), Gaps = 32/466 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 R ++L+GC ++ P P +LP + + WW+ F L Sbjct: 12 RLFIGCCCIVLSGCA--SQFAPPARPEPVLPEAWQ-AQLPAEAQVPEGDWWQRFGSPRLE 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR-----FIPNLKT 114 +LV + ++ + + A ER+ A+ + S + LFP+ S + + R Sbjct: 69 ELVLMGMEGSPDLAGAVERVIQAEAQLRSTGSSLFPAVNLSGGTSAQRRSVSGGSSTSSE 128 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 ++ L + +++D++G+ + +S ANL +++ + +L++I+ + Y +ER Sbjct: 129 STNLSLGASYEVDVWGRIAADVRASEANLAASHFDYESVRLSLIAGVASGYFQLLALEER 188 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++ + + L + ++ + + + G S L L + ++ + S S + +LE+ R + Sbjct: 189 LAYSRENLAISERVLGIVEARQRHGTASALDLARQQSTVLSQRSTLLSLEQQQRQTRSAL 248 Query: 234 STLLGYPATEFLHYMQKQSNNFQP--NLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 + LLG EF + N +P L +P ++ G+P+DL+ RPD+ E +L + A Sbjct: 249 AILLGVAPQEF-------AINPEPFSQLRVPTVDPGMPSDLLLRRPDLARAEAQLVAADA 301 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAE 348 I A++ L+PS+SL+ S + + G + IFD G+ +S I AE Sbjct: 302 SIVAARTALFPSISLSASAGAASSGLLSLSSPTSTLSLGASITQSIFDGGRRQSQIASAE 361 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSI---NEDKKIVTKLQHAVELHKKSMSLSMINYR 405 S +E T+++ +L A+KEVE+AL ++ ++ +++ T + + ++S+ L+ + YR Sbjct: 362 SRQRELLETYRKAILTALKEVEDALNTVHFSSQQEQLQTDI---LAETRRSLQLAELRYR 418 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G LL +LD +R+ + + + ++LY +G G+ Sbjct: 419 EGADDLLSVLDAQRSLFSAQDQMVQLQLTRLNGALELYKVLGGGWQ 464 >gi|209521430|ref|ZP_03270140.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498148|gb|EDZ98293.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 530 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 213/458 (46%), Gaps = 32/458 (6%) Query: 18 CTVGPEYTKPH--MPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQN 72 CTVGP+Y KP P + K DTL WW ++D SL+ L + N Sbjct: 39 CTVGPDYVKPAAVTPATWRELEGTGWKPAQPADTLTRGTWWRIYDDPSLDALEQQVASAN 98 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG---------QL 120 + A R AA+ ++ R++ FP A + R N+ ST Q+ Sbjct: 99 QDVQAAEARFRAARASVAQYRSEFFPVVRAGAQYSRTRTSENVLHKSTAGLTLNDYLVQV 158 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W+ DL+G+ R E + A ++ A VD A L++ ++L Y + R + + Sbjct: 159 DASWEPDLWGRVSRSGEGAKAGAQASAADVDAALLSLQAELATDYFELRGLDQERQLLDD 218 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y++ +EL+ ++ G + + + + ++K+ ++ L H I+ L+G+ Sbjct: 219 TIKAYQEALELTQHRYAGGIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAIAILIGH 278 Query: 240 PATEFLHYMQKQSNNFQPNLYIPI--NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P + F + P + +P+ G+P+ L+ RPDI E+ +A A+IG+A + Sbjct: 279 PPSTF-------ALPLAPLVAVPVVAATGVPSGLLERRPDIAAAERHVAAMNAQIGVATA 331 Query: 298 DLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P+L L G A + + WS GP L + D G + +A + E Sbjct: 332 AFFPNLVLAVTGGLEATNYSQWLLAPSRLWSLGPTLAGTLLDFGGRAAVKEQAHAQYDES 391 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TVLNA +VE+ L ++ ++ AV ++++++ YR G + LD+ Sbjct: 392 VAQYRQTVLNAFGQVEDNLAALRVLEQEAAAQDDAVAAAQRALAVVSDRYRNGAITYLDV 451 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 + + E + +SIA+R++A S V L A+G G++ Sbjct: 452 VVAQTTELTNERNAVSIARRRMAAS-VALVKALGGGWD 488 >gi|148545457|ref|YP_001265559.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148509515|gb|ABQ76375.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 472 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 208/469 (44%), Gaps = 32/469 (6%) Query: 7 IFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-------KWWESFND 58 I + + L C VGP+Y P + Q + N + D++ WW+ + D Sbjct: 5 ILAGLCLSLGACMMVGPDYEVPGDAAV--QRNDLNGPLRQDADSVVSAPVPEDWWQLYQD 62 Query: 59 TSLNKLVKIALQQNLTI-------------LQATERINAAKENILSVRADLFPSSYASIS 105 LN+LV+ AL N + ++ E + L S A + Sbjct: 63 QRLNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAFLQ 122 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +P + + + ++ DL+G +R E++ AN D+ A D A++ +++ ++ +Y Sbjct: 123 PEKVP-VANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 E IA + LDL +++++L+ G + + + + + KS+ +++P + Sbjct: 182 TQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKA 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ ++ LL P + + N +P+ G A L++ RPD+R E++ Sbjct: 242 ERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDG--AALLKRRPDVRQAERQ 299 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA + A IG+A LYP +S+ G+I + + P N W FGP++ I G + Sbjct: 300 LAAATAYIGVATGALYPDISIGAQVGTIGILENLGEPSTN-RWGFGPQISWTIPTNG-TR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + IR AE+S Q + VLNAI+E + L + L A + K++ + Sbjct: 358 ARIRMAEASTQAALANFDGVVLNAIRETQTRLAQYSALLDRREALAEAEKSAKEAADQTH 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ GR S L L R + L+ A Q+A + +++A+G G+ Sbjct: 418 RYYQAGRESFLADLQATRTYTDMRAQLAAANSQVALGQIGVFLALGGGW 466 >gi|269962995|ref|ZP_06177332.1| hypothetical protein VME_37160 [Vibrio harveyi 1DA3] gi|269832238|gb|EEZ86360.1| hypothetical protein VME_37160 [Vibrio harveyi 1DA3] Length = 494 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 118/477 (24%), Positives = 217/477 (45%), Gaps = 46/477 (9%) Query: 15 LAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 L+GC VGP+Y P + T ++ N + WW FND +LN LV QN+ Sbjct: 15 LSGCAVGPDYQTPTTSMAETYLYADQNGVSRSAEREAFWWTEFNDPTLNDLVLDMQSQNI 74 Query: 74 TILQATERINAA---KENILSVRADLFPSSYASISHRFIPN------------------- 111 + A ERI A K + S + I+++ N Sbjct: 75 PLKVAAERIKMADSYKSVVESFKVPTINVGAGYINYQLSKNDSLLGPALNPIGDSAAGLP 134 Query: 112 LKTNSTGQLDSD-----------WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--S 158 + +T LD+ W++DLFG R +S+ A + A++ + L + + Sbjct: 135 PQIGNTTLLDNQHDGVFAGASIAWELDLFG-RIDRQSNAAQIRVEQAEIYQSGLTTLLTA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ +Y+ + ER+++A L+ +K ++L G S L L + +A + ++ES Sbjct: 194 DLVHNYLQYQGASERLNLAKSNLEDQRKTMDLVEKVVRSGYGSDLDLAQAKATLAAMESI 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 IP LE + +++ H I+ LLG P ++ + + P + + IG+P+DL++ RPDI Sbjct: 254 IPQLEIAQQVHKHRIAVLLGEPLSKVEVRLAETQG--VPAMQNVVPIGLPSDLLQRRPDI 311 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIF 335 R E+++A ++ + ++ YP L G+ + + D+ F + W + +F Sbjct: 312 RLAEREMAAINEELAASIANQYPKFFLTGAPGVSASSFDDLFSSDSFGWVGAAGISWNVF 371 Query: 336 DKGKIKS--NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 D G+ + +I +A A +T+Q V +A EV++ L + ++ ++ A+ Sbjct: 372 DGGRGDALEDINQARFDAAT--LTYQHAVDSAFAEVDSTLFAYGRSQENQRRIDDALVAT 429 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K++ + YR G L +LD +R ++ AK Q A+ V LY ++G + Sbjct: 430 DKAVGKAKSLYRAGLIDHLSVLDAQRQQRMMQDRQIAAKLQTAQVTVALYKSLGGDW 486 >gi|134292855|ref|YP_001116591.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134136012|gb|ABO57126.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 483 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 212/465 (45%), Gaps = 46/465 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSK-----NLINIDTLKWWESFNDTSLNKLVKIALQ 70 AGC + P H L S+ + ++D WW F+D L++LV L Sbjct: 16 AGCALQPAQ---HAALPDAVASVAPAAWDADVPRTDVDAAAWWAQFDDRVLDRLVATVLD 72 Query: 71 QNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN----LKTNSTGQLDS 122 NL + A ER+ A+ RA L P S++A+ + + P ++ G L Sbjct: 73 ANLDLQAAAERVKQAQALTARKRAALLPELDASAHAADARQNTPPPLGYVRQAGVG-LAL 131 Query: 123 DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W D+FG +R + ++ A L D +L + + +Y+D R ++ ++I Sbjct: 132 SWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVDLRWAQQELTILEDNA 191 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 L ++ +EL+ + G +++L + + + ++ ++++ IP ++ I+ G Sbjct: 192 ALRRRALELTRKRQAFGLSTELDVTRAQNQLDALDARIPPTHAQIAHQLNLIAVYAGRTP 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPIN-IGIPADL----IRNRPDIRYQEKKLADSVAKIGIAK 296 + Q +P++ G PA L + RPD+ ++ A++G+AK Sbjct: 252 ESVDRLLLAQRGE------VPVSPAGSPATLPSQALLRRPDVLAAYAQVERRAAQVGVAK 305 Query: 297 SDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++ YP SLN G +A ++ DN F + S PIFD G+I ++I + Sbjct: 306 AERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIFDAGRITADIAQ 358 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +ES +E + ++T+L A++EVE+A ++ +L A+ ++ L+ Y+ Sbjct: 359 SESRMRESELQLRQTMLQALREVEDARANLVSSDAATQRLASALSASNHALGLANQLYKG 418 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LD+L + + L+ A+R+ A + V LY ++G G++ Sbjct: 419 GATDFLDVLSAQEVYLRDAEALNQARREHALAAVALYRSLGGGWS 463 >gi|295084208|emb|CBK65731.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Bacteroides xylanisolvens XB1A] Length = 454 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 198/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+SF D L+ L+ +A+ +N ++ A RI AA+ N+ R++ PS + R Sbjct: 42 WWKSFQDAKLDSLIALAVDRNYSVAMAINRIAAARANLWIERSNFLPSIGLNAGWTRQET 101 Query: 111 NLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + T+S Q L W++D+FG R+ +++ N ++ + +++ +++ Sbjct: 102 SGNTSSLPQTTDHYYDASLSMSWELDIFGSIRKRVKAQKENFAASKEEYTGVMVSLAAEV 161 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 YI+ R ++ + + + ++ ++++ +++ G +KL + + ++ + + ++ IP Sbjct: 162 ASVYINLRELQQELEVVKKNSASQEEVLKITEVRYNTGLVAKLDVAQAKSVLYNTKASIP 221 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE + ++ LLG + ++ S P+ PI +G+P DL+ RPD+R Sbjct: 222 QLEAGINQYITTLAVLLGMYPQDIRPVLE--SGGTLPDYMEPIGVGLPVDLLLRRPDVRG 279 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 E + A +G +K+D P + L GS LT S + P L Sbjct: 280 AELSVNAQAALLGASKADWLPKVFLKGSFGYAARDLKDLTKSKSM-----TYEIAPSLSW 334 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IF+ G++ + R A++ E + +TVL A++E +NA+ K + L+ Sbjct: 335 TIFNGGQLVNATRLAKAQLDEAINQFNQTVLTAVQETDNAMNGYRNSIKQIVALREVRNQ 394 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ LS+ Y+QG ++LD +R+ E L A+ + LY A+G G+ Sbjct: 395 GIETLKLSLELYKQGLSPFQNVLDAQRSLLSYENQLVQAQGSSLLQLIALYKALGGGW 452 >gi|239815546|ref|YP_002944456.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239802123|gb|ACS19190.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 495 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 28/417 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 WW +FND LN LV+ A N I A R+ A+ S AD P Sbjct: 66 WWLAFNDPVLNALVEKADVSNNNIQAAAARLAEARALARSANADRMPQIGLGAGANRGAG 125 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNV 156 A+ S R P TN +++DLFG R S+ A LD S A + +L V Sbjct: 126 LDKATASTR--PATMTNIGATFS--YEVDLFG-RLSGASNAAKLDAQSREALLQSTRLAV 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+ R ++ + ++ Y+ + LS + G ++L + +++ E+ S E Sbjct: 181 QAEVAQTYLQLRALDAERALVREQVEAYRDTLRLSQRRQQAGDIAELDVARVQTEVSSTE 240 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 SD L++ H ++ L+G A+ F + P+ + G+PA ++ RP Sbjct: 241 SDALALDRQRAQVEHALAVLVGDSASSFGLRTDDWATAL-PS----VPPGVPATVLTRRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 D+ + + + A++G+A++ +P +SL G+ + F W G L LP Sbjct: 296 DVSAAQNAVLAAQARVGVAQAAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLP 355 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ ++ ++ A + ++ VL A +EVE+ L++I ++ AV Sbjct: 356 IFDGGRREAGVQGANAQLDGALANYRNQVLVAFQEVEDQLSAIRILQEQSAVQAQAVTSA 415 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ SLS YR G S LD+LD R+ + K ++ V L AIG G+ Sbjct: 416 QRATSLSDTRYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVGLIRAIGGGW 472 >gi|301049756|ref|ZP_07196700.1| putative outer membrane efflux protein OprM [Escherichia coli MS 185-1] gi|300298488|gb|EFJ54873.1| putative outer membrane efflux protein OprM [Escherichia coli MS 185-1] gi|315291381|gb|EFU50741.1| putative outer membrane efflux protein OprM [Escherichia coli MS 153-1] Length = 432 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|295136166|ref|YP_003586842.1| multidrug resistance protein, FusA/NodT family protein [Zunongwangia profunda SM-A87] gi|294984181|gb|ADF54646.1| multidrug resistance protein, FusA/NodT family protein [Zunongwangia profunda SM-A87] Length = 515 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 111/497 (22%), Positives = 227/497 (45%), Gaps = 59/497 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM-PLLPTQFSIGNSK-----------NLINIDTLK-- 51 A+ + ++ + C VG EYT+P + ++F G K N +N DT+ Sbjct: 25 ALGAFAMIFVVSCKVGEEYTRPDFGDDVSSEFYAGGKKEETLAVDSLNSNEVNNDTIPMS 84 Query: 52 ---WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--------- 99 W + D +L L+ AL N+ + +A + + E + +A+ FPS Sbjct: 85 EIPWKDYITDRTLQNLIDTALVNNIDLQKAMKNMEIGMEELAQSKANFFPSLNARPAEYR 144 Query: 100 --SYASISHRFIPNLKTNSTGQ----------------LDSDWKIDLFGQRR-HIESSLA 140 Y+ + + N + G+ L ++W+ID++G+ R E++ A Sbjct: 145 RDYYSENFNNYGSNRARRNHGENPPESFYTERLEYASALQANWEIDVWGKLRWQKEAARA 204 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 + + ++IS++ +Y + K +I +A + L + + L++ G + Sbjct: 205 QFMKSKEFKKAVQTSLISEVAATYFNLVMLKSQIEVAQKNYALSDSTLNIVQLQYDAGES 264 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + L++ + +++ ++ IP LE+ + + + ++ LLG E + FQ Sbjct: 265 TSLAIQQTKSQKLKAKTLIPQLERQYVIMENKLNRLLGRSPREIQIDTDFEDIEFQERY- 323 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--- 317 G+P +LI+NRPD+ E +L + A G+A + YPSL++ S L NSF Sbjct: 324 ---TSGVPLELIKNRPDVAMSEYELITANADAGVANALRYPSLNIGASAGL---NSFKLE 377 Query: 318 ----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 P + ++ PIF+ K+K+N A S + + +++ ++ AI +V N+L Sbjct: 378 EFFDPVGSGFALLNGAIFQPIFNNRKLKTNYNVALSQKEIAQLDFKDDLITAIADVSNSL 437 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + + K+ Q +E+ +K + + + ++ G + L+++ + + E++L K Sbjct: 438 AKMEKLKEEFAIAQERIEVTQKGLKDAGMLFKGGYANYLEVISAQSDALESELNLINIKN 497 Query: 434 QLAKSYVDLYIAIGSGY 450 QL + V+LY ++G G+ Sbjct: 498 QLLIANVELYRSLGGGW 514 >gi|166711731|ref|ZP_02242938.1| outer membrane protein OprN precursor [Xanthomonas oryzae pv. oryzicola BLS256] Length = 497 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 115/487 (23%), Positives = 218/487 (44%), Gaps = 49/487 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLN 62 +L ++L GC +GP YTKP + + +++ L WWE D +L Sbjct: 10 VALSTLMLGGCMLGPNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELQDPTLT 69 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-------- 114 +LV AL + + A R+ A + RA+ P+ AS + + +T Sbjct: 70 QLVTQALADSPNLRAAQARLRANRALAQRRRAERLPTLDASALYAYAEPPQTIVDTLGGL 129 Query: 115 ------------------------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQV 149 S G D+ W++D+FG+RR E +LA ++ A++ Sbjct: 130 QQQGQPDQPPAAGNQALDLEKTQIYSAG-FDASWELDVFGRRRRAAEGALAQAQASEAEL 188 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 A++ + +++ Y++ R + R++IA LD ++ ++L + QGA S L + ++ Sbjct: 189 ADAQVQLAAEVGQVYLNYRGLQARLAIADANLDKIRQTLQLVQQRRGQGAASDLQVEQIA 248 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-- 267 +++ ++ LE + ++ ++G + + QP +P + + Sbjct: 249 TQVQQQQAQRLPLEMQSQEAQDQLALMVGRAPGALDSLL----SAPQPLPMLPTQVRVDD 304 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 LIR RPD+R E++LA S A+IG A + +P +SL G ++ S +N+ Sbjct: 305 AGALIRRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALAR 363 Query: 328 ---PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 P L IFD GK ++ + +A + + ++ TVL A+++ +AL +K + Sbjct: 364 LAVPMLRWSIFDFGKTRAQVEQARAGNAGRTAAYEGTVLAALQDANSALARFGSARKQLV 423 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + A +S L G S +D+LD++R + + A+ QL +YV L Sbjct: 424 VARQAEASATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQK 483 Query: 445 AIGSGYN 451 ++G G++ Sbjct: 484 SLGLGWS 490 >gi|187926598|ref|YP_001892943.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|241666109|ref|YP_002984468.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] gi|187728352|gb|ACD29516.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|240868136|gb|ACS65796.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 491 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 106/479 (22%), Positives = 210/479 (43%), Gaps = 41/479 (8%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----------WW 53 A +++ + L+ GC VGP++ P P + G + D + WW Sbjct: 4 AAWAIGVALVVPGCAVGPDFHAPQAPGVDRYLRDGEVAQPPSADGVAQRFTAATVPADWW 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASIS 105 + +L+ ++ A+ N + QA + AA++ + + +P S A++ Sbjct: 64 HALGSPALDLAMEAAITANPGLQQAQANLRAAQDLLRAGAGVFYPQVAGSADVSRQAAVP 123 Query: 106 HRF----IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 R +P+L T T + +DLFG RR +E+ A + V A L + L Sbjct: 124 ARLGQAGVPSLFTLWTLGASISYAVDLFGGNRRAVEALAAQAEGQRYAVAAAYLTLTGNL 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I ++ +I ++ + ++ +E++H + G + S + L A++ S+E+ +P Sbjct: 184 VNAVIAHAAYRAQIDTTRSLIAVVREQMEIAHAQVEAGVVAHASELSLAAQLASLEASLP 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDI 278 LE+ H + L G +E + N Q +P ++ +P++L+R RPD+ Sbjct: 244 PLEQKRDQAAHLQAVLTGRFPSE-ADAVDVALNGLQ----LPADLPSLVPSELVRQRPDV 298 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 + +L A++G+A + + PSL+L+ A S F WS G L P+F Sbjct: 299 LAAQARLHQVSAEVGVATAAMLPSLTLSADYARMSGRSADLFGAKAGAWSVGANLVAPLF 358 Query: 336 DKGKI---KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 + G + +S R+A +A Y ++ VL + ++V + L ++ D + A Sbjct: 359 EGGTLYFRRSASRQALQAADAGY---RQVVLASFEQVADVLRALEHDAVQLDAQLRAQAA 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +YR G L +L ++ + + + Q + V L++A+G G+ Sbjct: 416 ASAALDEINADYRAGVAGYLQVLSADQQYQQAVLGTQQVRAQRLQDTVALFLALGGGWR 474 >gi|323491248|ref|ZP_08096433.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] gi|323314374|gb|EGA67453.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546] Length = 496 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 123/482 (25%), Positives = 220/482 (45%), Gaps = 56/482 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPT-----QFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L+GC VGP+Y P + T ++S+ NS+N WW FND +LN LV Sbjct: 15 LSGCAVGPDYQVPTTSMAETYMHNEKYSVSQNSEN-----EAFWWMEFNDPTLNDLVLDM 69 Query: 69 LQQNLTILQATERINAA----------KENILSVRADLFPSSYA-------------SIS 105 QN+ + A ERI A K +++ A F + S S Sbjct: 70 QSQNIPLKVAAERIKMADSYKTVVESFKVPTVNIGAGYFNYQLSKNDSLLGPALNPISDS 129 Query: 106 HRFIPNLKTNST---GQLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN 155 +P N+T Q D W++DLFG R +S+ A + A++ + L Sbjct: 130 AAGLPPQIGNTTLLENQHDGVFAGASIAWELDLFG-RIDRQSNAAKIRVEQAEIYQSGLT 188 Query: 156 VI--SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + + LI +Y+ + ER+ +A L+ +K + L G S L L +A + Sbjct: 189 TLLTADLIHNYLQYQGATERLDLAKSNLEDQRKTMALVEKVVRSGYGSDLDLAHAKATLA 248 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADL 271 ++ES IP LE + +++ H I+ L+G P L ++ + + Q P ++ + +G+P+DL Sbjct: 249 AMESIIPQLEIAQQVHKHRIAVLIGEP----LSKVETRLADTQGVPEMHNMVPVGLPSDL 304 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGP 328 ++ RPDIR E+++A ++ + ++ YP L G+ + + D+ F + W Sbjct: 305 LQRRPDIRIAEREMAAINQELAASIANQYPKFFLTGAPGVSASSFDDLFSSDSFGWVGAA 364 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + +FD G+ + ++ +T+Q V +A EV++ L + ++ ++ Sbjct: 365 GISWNVFDGGRGDALEEINQARFDAATLTYQHAVDSAFAEVDSTLFAYGRSQENQRRIDD 424 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A+ K++S + YR G L +LD +R ++ AK Q A+ V LY ++G Sbjct: 425 ALVATDKAVSKAKSLYRAGLIDHLSVLDAQRQQRMMQDRQIAAKLQTAQVTVALYKSLGG 484 Query: 449 GY 450 + Sbjct: 485 DW 486 >gi|170690705|ref|ZP_02881871.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170143954|gb|EDT12116.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 503 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 122/472 (25%), Positives = 216/472 (45%), Gaps = 43/472 (9%) Query: 4 LRAIFSLFIV---LLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFN 57 LR + + I L A VG P+Y +P P T ++ + + T++ WW+ FN Sbjct: 38 LRGLCAATICAASLCACVDVGMPDYKRPDTPG-KTSWTGQSGAPVSAAATIEPDWWKGFN 96 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D +L+ L+ A+ N I RI+ A+ I +A P+ F +T Sbjct: 97 DPALDSLIAKAIGGNFDIKILAARIDVARTQIGEAKAGALPTMDLGAGASF-----QKTT 151 Query: 118 GQL---------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 GQ +W ID++G+ + +++ A ++ A L ++S + +Y Sbjct: 152 GQTFAKQYNVAAQVNWDIDIWGKVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQI 211 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 F ++I + L ++ + + + G + +++ +AEI + + + L +S Sbjct: 212 LQFDDQIEQQQKTLVTNRQILSIYEGQRRSGLVPQTQVLRQQAEINRLTNQLLELRRSRD 271 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 + + + TL G PA EF Q + Q + P + G+PA L+ RPD+ E ++ Sbjct: 272 LANNALCTLTGVPAGEF----QLPKGHLQQRVQSPGVPDGLPAQLLARRPDLVAAEFRVL 327 Query: 287 DSVAKIGIAKSDLYPSLSLNG-----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDKG-K 339 ++ +G AK P++SL G S ALT SF + F P + +P+ D G + Sbjct: 328 EAYDLVGQAKLAQLPTISLTGHGGTASFALTDLLKSF-----TYGFMPSINIPLLDPGVR 382 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +A+S+ EQ ++ TV+ A +EVENAL ++N K +LQ V+ + Sbjct: 383 AHVKVTQAQSTVAEQQ--YRATVMGAFEEVENALVNLNAHKAQRVELQQQVDRLQIVADQ 440 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-YVDLYIAIGSGY 450 R G S L++ + ER + ++ L +A QL S V LY A+G G+ Sbjct: 441 IQSQLRLGVVSQLEVFETERTLLEAQLSL-LANHQLILSDTVLLYKALGGGW 491 >gi|293603907|ref|ZP_06686322.1| multidrug efflux RND outer membrane protein OprN [Achromobacter piechaudii ATCC 43553] gi|292817744|gb|EFF76810.1| multidrug efflux RND outer membrane protein OprN [Achromobacter piechaudii ATCC 43553] Length = 513 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 108/456 (23%), Positives = 207/456 (45%), Gaps = 37/456 (8%) Query: 20 VGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTIL 76 VGP+Y +P P++ L + D L+ WW+ D L++LV +AL +N I Sbjct: 53 VGPDYQRPQDAPVVLAS----PEAALFSADALQRDWWKQLQDPQLDQLVALALSRNHDIR 108 Query: 77 QATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ----------LDSDWK 125 A R+ ++ + D P+ + R + TGQ D+ W+ Sbjct: 109 IAQSRLAESRAVLDEKELDRLPAVTLDGRYERSLSQANAGPTGQRNLAQSYRAGFDATWE 168 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--SKLIPSYIDARHFKERISIAHQILDL 183 +DL+G+ RH A A Q D+A+ ++ +++ +Y + R ++R+++A L Sbjct: 169 LDLWGRLRHAAQGAAARSEAQ-QADLAQTRIVVAAEVARNYFELRGAEQRLAVARANLAS 227 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + ++ ++ G + L AE++++++ +P + R+ + ++ L G E Sbjct: 228 QRDSLRVTEAMVQAGRGDEGDLASARAELETVQASVPVQVTARRLAQYRLAVLAGMRPVE 287 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 S P L + IG L+ RPD+ E+ +A + A +G+A ++LYP + Sbjct: 288 LAAL--DASQPLAP-LTARLPIGDVGALLSRRPDVAAAERNMAAANADVGVATAELYPRI 344 Query: 304 SLNGS---IALTHDNSFPGYNTHWSFG-----PKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L G +AL + + +S P L+LP K + R A+ Sbjct: 345 DLGGFLGFVALRGADVGAASSRAFSVASGVNWPALHLPTALARKRAAVARADGVVAR--- 401 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++TVL A++E+E+ALT + ++ + L A +++ L+ + YR G L +L Sbjct: 402 --YEQTVLQAVQELESALTEFGQTQQRLGNLLEAAAQSRRAADLAQLRYRAGSAPYLTVL 459 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D +R + + +++A+ V LY A+G G+ Sbjct: 460 DAQRTLLRAQDAVAVAETDSYARLVALYKALGGGWE 495 >gi|162149138|ref|YP_001603599.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209545118|ref|YP_002277347.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161787715|emb|CAP57311.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532795|gb|ACI52732.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 516 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 114/481 (23%), Positives = 214/481 (44%), Gaps = 60/481 (12%) Query: 15 LAGCTVGPEYTKPHMP-------LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL-VK 66 LAGC VGP Y +P P L P + + WW +ND LN+L + Sbjct: 25 LAGCMVGPSYHRPAAPVSARFKELTPAAGWERARPAMAELPKGAWWTIYNDPVLNRLESQ 84 Query: 67 IALQ-QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-----KTNSTGQL 120 +A+ QN+ + +A R A+ I SVRA LFP+ S+ F N ++ STG L Sbjct: 85 VAISNQNVRMYEANYR--QARAMIDSVRAQLFPTLSGSLG--FNRNSQGRGSRSASTGSL 140 Query: 121 -------------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + W +DL+G+ RR+I+S + ++ A + A L+ ++L Sbjct: 141 VSYGGAATNTTETTYSMGPSASWDLDLWGRIRRNIQSQVTEAQASAADLANATLSYQAQL 200 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + R+ + + +D + ++++ ++ G ++++ +++ + + Sbjct: 201 ATAYFNLRYQDSLQELLRRYVDFNTQALQITQNQYEAGTADPTAVMQARTQLEQNRATLI 260 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + H I+ L+G P + + P I +G+PADL++ RPD+ Sbjct: 261 QAGIARAQYEHAIAVLMGRPPADLTI-----TPGTLPRQIPAIPVGVPADLLQRRPDVAA 315 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---------YNTHWSFGPKLY 331 E+ + A+IG + +P + LT D S+ G N WS G Sbjct: 316 AERAMEQYNAQIGADMAAFFPD------VTLTADYSYSGDPIGQLVQVVNRIWSLGASAS 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +F G + + A + T+++TVL A++ E+ L+++ ++ T+ Q A++ Sbjct: 370 EVLFQGGSRMAAVHGANAQYDSAVATYRQTVLTALQNTEDNLSNLRILEQQATQQQIALD 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ +S+ Y G ++ E A + E LSI ++++ S V L A+G G+ Sbjct: 430 FANQAVQVSLNQYEAGTQIYTTVITNETTALSNAESALSIQQQRMVDS-VALVQALGGGW 488 Query: 451 N 451 N Sbjct: 489 N 489 >gi|300996922|ref|ZP_07181587.1| putative outer membrane efflux protein OprM [Escherichia coli MS 200-1] gi|300304377|gb|EFJ58897.1| putative outer membrane efflux protein OprM [Escherichia coli MS 200-1] gi|324010556|gb|EGB79775.1| putative outer membrane efflux protein OprM [Escherichia coli MS 60-1] Length = 432 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRELSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|76817482|ref|YP_336189.1| ABC-type export system, outer membrane channel protein [Burkholderia pseudomallei 1710b] gi|167923937|ref|ZP_02511028.1| outer membrane lipoprotein [Burkholderia pseudomallei BCC215] gi|226195677|ref|ZP_03791264.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|254265314|ref|ZP_04956179.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76581955|gb|ABA51429.1| ABC-type export system, outer membrane channel protein [Burkholderia pseudomallei 1710b] gi|225932162|gb|EEH28162.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|254216316|gb|EET05701.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 494 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALITGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|262199500|ref|YP_003270709.1| RND efflux system, outer membrane lipoprotein, NodT family [Haliangium ochraceum DSM 14365] gi|262082847|gb|ACY18816.1| RND efflux system, outer membrane lipoprotein, NodT family [Haliangium ochraceum DSM 14365] Length = 491 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 219/474 (46%), Gaps = 42/474 (8%) Query: 4 LRAIFSLFI-VLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +R + SL V LAGC+ P P+ LP+ +++ + + +WW F+D L Sbjct: 1 MRVLVSLCTAVALAGCSPHKVTHNPAPPVELPSAYTVAETGGSAQPE--RWWLDFSDAQL 58 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRF------IP 110 N LV+ AL+ NL + + RI A+ + + ++P +S A S RF I Sbjct: 59 NALVQRALRDNLQLRASWARIEQARALLRQAESGMWPQVDLSASAARQSSRFFLGDQVIE 118 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDAR 168 N + + + + ++IDL+ QR + + A L + A+ D A +++ +++ ++ D Sbjct: 119 NTANSYSASIGAAYEIDLW-QRIASQGNAAALSALAARDDYEAAAMSMAAEVAEAWFDLV 177 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++++ + L+ + +EL L+F +G S L + + + S + I LE S + Sbjct: 178 SYNAQLTLVSEQLETNETYLELVELRFQKGLASALDVYQQRQQQVSTRAQITLLESSLGL 237 Query: 229 NVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ LLG P + + + P +P G+PADL+ RPD+R ++++ Sbjct: 238 LRNRLAVLLGQAPGSLAIEPPETLPETLPP---LPAR-GLPADLLERRPDVRAAQRRVEA 293 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----------WSFGPKLYLPIFDK 337 + ++ A + PSL ++GS GY WS + IFD Sbjct: 294 ADYQVAAAVAARLPSLRISGSY---------GYQAQTLGDFLSSPVWSLVASVAQSIFDG 344 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + + R + +E + + + +L A+ EVENA+ + +L AVEL ++ Sbjct: 345 GRRAAEVERTRAVVEEALMGYGQVLLLAMAEVENAIVQEQYQLTYIEELAEAVELADATL 404 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y QG L +L +A + +V L A+RQL + + A+G + Sbjct: 405 REARARYSQGLADYLPVLTALQALQRSQVSLLQAQRQLISYRIQMNRALGGTWT 458 >gi|300824999|ref|ZP_07105097.1| putative outer membrane efflux protein OprM [Escherichia coli MS 119-7] gi|300927344|ref|ZP_07143068.1| putative outer membrane efflux protein OprM [Escherichia coli MS 182-1] gi|301329066|ref|ZP_07222079.1| putative outer membrane efflux protein OprM [Escherichia coli MS 78-1] gi|309798090|ref|ZP_07692464.1| putative outer membrane efflux protein OprM [Escherichia coli MS 145-7] gi|300416700|gb|EFK00011.1| putative outer membrane efflux protein OprM [Escherichia coli MS 182-1] gi|300522519|gb|EFK43588.1| putative outer membrane efflux protein OprM [Escherichia coli MS 119-7] gi|300844582|gb|EFK72342.1| putative outer membrane efflux protein OprM [Escherichia coli MS 78-1] gi|308118331|gb|EFO55593.1| putative outer membrane efflux protein OprM [Escherichia coli MS 145-7] gi|324020180|gb|EGB89399.1| putative outer membrane efflux protein OprM [Escherichia coli MS 117-3] Length = 432 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|325914759|ref|ZP_08177097.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] gi|325539036|gb|EGD10694.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] Length = 493 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 114/479 (23%), Positives = 213/479 (44%), Gaps = 50/479 (10%) Query: 16 AGCTVGPEYTKPHMPLL------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GC +GP YTK P+ PT ++ + WWE ND L +LV AL Sbjct: 15 GGCMLGPNYTKAP-PVADAAMQAPTLHRASGAQVVAAAPLNHWWEQLNDPQLTQLVTQAL 73 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQ--- 119 + + A R+ A + RA+ P +YA + L GQ Sbjct: 74 ADSPNLRAAQARLRANRALARQRRAERLPKLNASALYAYAEPPQTIVDTLGGLQEGQPGQ 133 Query: 120 --------------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 D+ W++D FG+RR E +LA ++ A++ A++ + + Sbjct: 134 PPATGDQALDLDKTQIYSAGFDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAA 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y++ R + R+ IA LD +++++L + QGA S L + ++ +++ ++ Sbjct: 194 EVGQVYLNYRGLQARLGIADANLDKIRQSLQLVQQRRAQGAASDLQVEQIATQVQQQQAQ 253 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNR 275 LE + + ++ ++G P + Q +P +P ++ + LIR R Sbjct: 254 RLPLEMQLQEALDQLALMVGREPGA-----LDAQLAAVRPLPMLPTDVRVDDAVALIRRR 308 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+R E++LA S A+IG A + +P ++L G ++ S +N+ P L Sbjct: 309 PDVRKAERELAASSAQIGEALNGYFPQVTLLGGLSWVA-GSPSDFNSDALTTLAVPMLRW 367 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD GK ++ + +A + + ++ VL A+++ +AL+ +K + + A Sbjct: 368 SIFDFGKTRAQVEQARAGNAGRVAAYEGAVLVALQDANSALSRFGSARKQLVVARQAEAS 427 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S L G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 428 ATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQLQLLVNYVALQKSLGLGWS 486 >gi|300907735|ref|ZP_07125355.1| putative outer membrane efflux protein OprM [Escherichia coli MS 84-1] gi|301302042|ref|ZP_07208175.1| putative outer membrane efflux protein OprM [Escherichia coli MS 124-1] gi|300400553|gb|EFJ84091.1| putative outer membrane efflux protein OprM [Escherichia coli MS 84-1] gi|300842594|gb|EFK70354.1| putative outer membrane efflux protein OprM [Escherichia coli MS 124-1] gi|315255134|gb|EFU35102.1| putative outer membrane efflux protein OprM [Escherichia coli MS 85-1] Length = 431 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|134278410|ref|ZP_01765124.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|134250194|gb|EBA50274.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] Length = 494 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGVARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALIAGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|292487906|ref|YP_003530781.1| putative HAE1 family transporter [Erwinia amylovora CFBP1430] gi|292899127|ref|YP_003538496.1| efflux pump outer membrane protein [Erwinia amylovora ATCC 49946] gi|291198975|emb|CBJ46086.1| putative efflux pump outer membrane protein [Erwinia amylovora ATCC 49946] gi|291553328|emb|CBA20373.1| putative HAE1 family transporter [Erwinia amylovora CFBP1430] Length = 459 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 214/457 (46%), Gaps = 33/457 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L GC E +P+ PTQ+ +G + WW +F+D LN+LV+ AL+ N Sbjct: 17 LTGCATHVERAPSSLPI-PTQWRNQVGPGAAV----EAGWWHAFHDPVLNQLVEQALRHN 71 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---RFI------PNLKTNSTGQLDSD 123 IL A R++ + + D FP+ A ++ R I P + G L ++ Sbjct: 72 PDILIARSRVDQYRAQLRGAEGDNFPTLDAGMAGSRARAISAVTGQPYPYSVVQGLLQAN 131 Query: 124 WKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 + +DL+G+R I+++ A L + A A L + S + Y+ E++ + L Sbjct: 132 YNVDLWGERSSSIDAAKATLAAQQAAAAAAGLTIASSVASGYMTLASLDEQLRVTEATLA 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +++L+ +F G +S+L ++ ++E ++ ++ IP L+ + +S L+G Sbjct: 192 SRNDSLKLAQRQFETGYSSRLEWLQSQSEYQTAKAQIPLLQHQIAEQENALSILVGMNPR 251 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q F+ + + +P+ L++ RPDI E++L + A + A++ L PS Sbjct: 252 QIARQHQ-----FEHPVAQTMPTVMPSRLLQRRPDIVQAERQLLAADASLQSARASLLPS 306 Query: 303 LSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+L S L DN F WS G + P+ ++ + + + + ++ + Sbjct: 307 LNLTASGTLQSSVLHQLIDNPF----RLWSVGGSILAPLLNREALTAQVDVSMATRNQAL 362 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ V A EV N L +I ++ +L ++ ++++ ++ Y+ G S LD L Sbjct: 363 YNYEKVVRAAFSEVNNDLDAITRYQQQQDELLIQQQVAQEALRIARKRYQNGYASYLDEL 422 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 D +R ++ + AK L + +DLY A+G G+ P Sbjct: 423 DAQRTLFTTQLSVVRAKNNLLLAQIDLYRALGGGWQP 459 >gi|225164867|ref|ZP_03727088.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] gi|224800516|gb|EEG18891.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] Length = 490 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 109/464 (23%), Positives = 208/464 (44%), Gaps = 33/464 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----------KWWESFNDTSLNKLV 65 GC++ P+Y +P P+ P + + T +W F D L L+ Sbjct: 27 GCSLAPKYERPASPV-PDAWPTATPASPATPATTTTTATDAPSLPEWSTFFGDPRLQALI 85 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTN--- 115 ++ L N + A R+ + + L+P+ + A + F P + Sbjct: 86 QLGLDNNRDLRTALLRVEQTRAQYQIQNSALWPNLNGSAGMTRARTAGDFSPATAPHGNT 145 Query: 116 ----STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARHF 170 + G + W+IDLFG+ R++++S A Q A+L+ IS L Y+ R Sbjct: 146 GNQFTVGGALATWEIDLFGRIRNLKTSALETYFATEQARRAAQLSYISTLASQYLTERST 205 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E++++ Q L L + + +L +F +G ++L L E+++ + + T+ + R++ Sbjct: 206 AEQLALGRQTLQLVQDSHDLIKHRFDKGVATELDLRTAESQVAATRA---TIAEYTRLHA 262 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ L A + L + G+P+DL++ RPDI E L S A Sbjct: 263 QALNALAYLVAAPIPDTLPPPPPLAAQKLLTDLPAGLPSDLLQRRPDILQAEHLLRASNA 322 Query: 291 KIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS++L G+ + + F ++ W+F P++ LPIF G+ ++ + A Sbjct: 323 DIGAARAAFFPSITLTAFGGTSSAQLSDLFSAHSAAWNFSPQITLPIFTAGRNRATLEIA 382 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q + T+++T+ A +EV + L + + + Q V + +LS Y+ G Sbjct: 383 QLQKQIEIATYEKTIQTAFREVADGLAARASYDEQLAAQQAQVAATQARYNLSDARYKGG 442 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +L ++ + +L ++ S VDLY A+G G+N Sbjct: 443 VADYLAVLTAQQDLFNAQQNLIRSQTLHYISLVDLYRALGGGWN 486 >gi|126458428|ref|YP_001076653.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|167916094|ref|ZP_02503185.1| outer membrane lipoprotein [Burkholderia pseudomallei 112] gi|242311904|ref|ZP_04810921.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|126232196|gb|ABN95609.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|242135143|gb|EES21546.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 494 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALIAGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|194367608|ref|YP_002030218.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194350412|gb|ACF53535.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 471 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 104/471 (22%), Positives = 217/471 (46%), Gaps = 28/471 (5%) Query: 3 ILRAIFSL-FIVLLAGC-TVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFN 57 +LRA+ + +L GC ++ P Y +P P+ P Q + G ++ ++ + W E F Sbjct: 5 LLRALAAATMTTVLGGCVSMAPHYQRPEAPV-PAQIGNAATGEAEPVLTMPA--WREVFL 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI--PNLK 113 + L +++ +ALQ N + A ++ + RA L PS + S++ + N + Sbjct: 62 EPRLQQVIALALQNNRDLRVAVLQVQKERAQYRIQRAALLPSVDASGSVTRSRVSDANSE 121 Query: 114 TNSTGQLDSD--------WKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSY 164 T +T +SD W++DLFG+ R + + +L N ++ A+ ++++++ ++ Sbjct: 122 TGATQITESDAVQVGISSWELDLFGRIRSLNNEALQNWLASAENQRAARTSLVAEVATAW 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + ++ ++ Q LD ++ ++ + + QG S L L +++ +++ + + L+ Sbjct: 182 LALAADEQSLAFTRQTLDSQQQTLQRTEARHAQGLASGLDLSQVQTSVEAARAALAKLQT 241 Query: 225 SFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + L+G P L Q P++ +P+ ++ RPD+ E Sbjct: 242 QQARDRDALQLLVGAPLDAALLPGAQALDGTV---ALAPLSANLPSSVLLQRPDVLSAEH 298 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +P+L+L G + F WSF P + PIF G + Sbjct: 299 ALQAANADIGAARAAFFPTLTLTANYGHSSTALSTLFSAGTRGWSFAPSITAPIFHAGAL 358 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+++ ++ +++ + A EV +AL + + + + V ++S +L+ Sbjct: 359 KASLDASKIGKDIGIAQYEKAIQQAFSEVADALATRDHLIAQMEAQRALVAASQRSYTLA 418 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G L LD +R+ + DL ++Q A + V L+ +G G + Sbjct: 419 DARYRTGLDGYLQALDAQRSLYAAQQDLIALQQQEAGNRVTLFKVLGGGAD 469 >gi|85717299|ref|ZP_01048253.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter sp. Nb-311A] gi|85695888|gb|EAQ33792.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter sp. Nb-311A] Length = 471 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 107/456 (23%), Positives = 204/456 (44%), Gaps = 27/456 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC + + P + + P + + + L WW F+ L L++ A NL I Sbjct: 14 GCILTRDIPDPALDI-PVAYKAARTTAADALPALDWWRGFHSPELTGLMEEAQTVNLDIA 72 Query: 77 QATERINAAKENILSVRADLFPS-------SYASISHRFIPNLK------TNSTGQLDS- 122 A RI A + A L PS +Y S + L N G L + Sbjct: 73 AAAARIIQADQQAQIAGAALLPSVSVGGQEAYFRTSGSSLSGLTNRGREVVNYAGTLSAA 132 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQV---DIAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++ID +G+ R ++ LA +++A A D+ L ++ + +Y ++RI A + Sbjct: 133 SYEIDFWGKNR--DAMLAAVETATASRFDRDVIALTTLASVANAYFQVLAAQDRIRTAER 190 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++ + + G S L + + E+ + ++ + +P+L ++ N++ ++TL+ Sbjct: 191 NIASATRILDALKQRLSAGTGSDLDVAQQESVLANLRAAVPSLRQTLVQNINALATLVAR 250 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P E + N P G+P++L+ RPDIR QE +LA + A +G A++ Sbjct: 251 P-PESVKVKGGSLNQITAPRVTP---GLPSELLTQRPDIRRQETQLAAATANVGSARAQF 306 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSF---GPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS+ L + +F L PIFD G+I N + E Sbjct: 307 FPSIQLTAQGGYQSPALVALFQPQAAFFNLAGSLTQPIFDGGRILGNFELTRAKQDELLQ 366 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 T+++TV++A +V+NALT++ + + + + + V +++ LS G ++ +L+ Sbjct: 367 TYRKTVVSAFADVDNALTAVRQTTERLRRQREVVAASRRAFQLSEQQLHAGTADIIIVLN 426 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + LS A+ ++ V LY A+G G+ P Sbjct: 427 TQSTLFQAADVLSQAQLARLQAIVSLYQALGGGWEP 462 >gi|295097783|emb|CBK86873.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 461 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 109/462 (23%), Positives = 225/462 (48%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + ++ + W F D + +L+ Sbjct: 12 IFILAGCVSLAPEYQRPAAPV-PQQFSLSRNSLTPAVNGYQDTGWRNFFVDPQVTRLITE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQKYDAGLE 130 Query: 123 -DWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 FSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 248 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 P + + + PNL + ++ RPDI E +L + A IG Sbjct: 249 TYRALPPEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGA 300 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L ++ + + F + W+F PK+ +PIF+ G+ K+N++ AE Sbjct: 301 ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q+ + +++ + +A K+V + L + + + Q ++ + ++ + Y G S Sbjct: 361 QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYSSGAVSY 420 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 421 IEVLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|329888319|ref|ZP_08266917.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Brevundimonas diminuta ATCC 11568] gi|328846875|gb|EGF96437.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Brevundimonas diminuta ATCC 11568] Length = 428 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 111/412 (26%), Positives = 193/412 (46%), Gaps = 22/412 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW +F D +L V AL +N+ + A R+ A+ RA LFP+ S + R Sbjct: 21 WWRAFGDPALTAAVDAALVRNIDLAVAEARVREAEALADQARAGLFPTLDGSGGAQQART 80 Query: 109 IPNLKTNS---TGQ--LDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIP 162 + L S TGQ L +++DL+G+ R+ +++ A+L ++ D L+V S Sbjct: 81 LSALGQPSEAATGQVQLQVAYEVDLWGRVRNADAAARASLQASEFGRDARALSVASATAR 140 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ ++ IA L + + L+ + G TS+L L + E+E ++ IP L Sbjct: 141 AYVTLLSLDAQLEIARSTLTSRDEALRLATRRADAGQTSRLELTQAESEQRAAARQIPAL 200 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRY 280 E + R + + L+G P +++ L +P + G+P+ L+ RPD+ Sbjct: 201 ELAIRRQENALRLLIGDMPGRVERGRLEE--------LVLPAPSPGLPSALLARRPDVAQ 252 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E +L + A A++ L P + L GS+ L ++ P T WS G + P+FD G+ Sbjct: 253 AEAQLIATDASFASAQAALLPQVRLTGSLGELLVESLDP--TTVWSLGGSILAPLFDGGR 310 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + AE+ + +++ VL A EVENAL + ++ + Q + ++ Sbjct: 311 LAAGAEAAEARRDQAAFSYRGVVLGAFSEVENALEGVTRLERQAEEAQAQWVALENALFH 370 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G S L+ LD +R VE+ L + + V LY A+G G+ Sbjct: 371 ARNRYRAGYASYLEELDAQRGLFNVELSLVQLQESRLLNAVALYQALGGGWT 422 >gi|309782706|ref|ZP_07677427.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] gi|308918484|gb|EFP64160.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia sp. 5_7_47FAA] Length = 495 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 106/479 (22%), Positives = 210/479 (43%), Gaps = 41/479 (8%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----------WW 53 A +++ + L+ GC VGP++ P P + G + D + WW Sbjct: 4 AAWAIGVALVVPGCAVGPDFHAPPAPGVDRYLRDGEVAQATSADGVAQRFTAATVPADWW 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASIS 105 + +L+ ++ A+ N + QA + AA++ + + +P S A++ Sbjct: 64 HALGSPALDLAMEAAITANPGLQQAQANLRAAQDLLRAGAGVFYPQVAGSADVSRQAAVP 123 Query: 106 HRF----IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 R +P+L T T + +DLFG RR +E+ A + V A L L Sbjct: 124 ARLGQTGVPSLFTLWTLGASISYAVDLFGGNRRAVEALAAQAEGQRYAVAAAYLASTGNL 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I ++ +I ++ + ++ +E++H + G + S + L A++ S+E+ +P Sbjct: 184 VNAVIAHAAYRAQIDTTRSLIAVVREQMEIAHAQVEAGVVAHASELSLAAQLASLEASLP 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDI 278 LE+ H + L G +E + N Q +P ++ +P++L+R RPD+ Sbjct: 244 PLEQKRDQAAHLQAVLTGRFPSE-ADAVDVALNGLQ----LPADLPSLVPSELVRQRPDV 298 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 + +L + A++G+A + + PSL+L+ A S F WS G L P+F Sbjct: 299 LAAQARLHQASAEVGVATAAMLPSLTLSADYARMSGRSADLFGAKAGTWSVGVNLVAPLF 358 Query: 336 DKGKI---KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 + G + +S R+A +A Y ++ VL + ++V + L ++ D + A Sbjct: 359 EGGTLYFRRSASRQALQAADAGY---RQVVLASFEQVADVLRALEHDAVQLDAQLRAQAA 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +YR G L +L ++ + + + Q + V L++A+G G+ Sbjct: 416 ASAALDEINADYRAGVAGYLQVLSADQQYQQAVLGTQQVRAQRLQDTVALFLALGGGWR 474 >gi|170723629|ref|YP_001751317.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169761632|gb|ACA74948.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 503 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 209/461 (45%), Gaps = 24/461 (5%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +++LAGCT VGP+Y P L T + + +WW F D +L+ L+ Sbjct: 10 LLMVLAGCTQVGPDYETPRHAWLGSWSTPLLEQAQRRAAQPELRQWWAVFADPALDALIA 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTN--- 115 A N ++ A R+ A+ + V+ +P S Y + + + Sbjct: 70 EADANNTSLRVAGLRVAEARAQLAIVQTGRYPQLQQLRGQSLYLKQDQSGTASARDSVFW 129 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S+ D W+ID +G+ R IES+ A ++ A A L + +++ +Y R + R Sbjct: 130 QSSAGFDIGWEIDFWGRFSRAIESADAAYFASQANYADAMLLMRAQVADTYFALRTAEAR 189 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + IA + +++E++ F G +L + + + ++ IP E + + Sbjct: 190 LQIATENARRQARSLEITERLFRHGENDELDWQQARTQYLATQATIPEFENQLNALRNVL 249 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL P + P+ + ++ PA L++ RPDIR E+ +A A +G Sbjct: 250 CALLDRPPGPLPQLAARYGQLPLPDRAVLQDV--PASLLQRRPDIRAAEQAVAAQSALVG 307 Query: 294 IAKSDLYPSLSLNGSIALT--HDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A +DLYP LSL GSI T N P NT + GP L FD G+ K+ +R ++ Sbjct: 308 VATADLYPQLSLLGSIGWTFVSANQLP--NTFDLAAGPSLIWSPFDYGRRKNAVRVEDAR 365 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 Q+ +Q+ V A +E ++A + + + + Q A + ++S++L+ Y++G Sbjct: 366 LQQLIELYQQGVREAAREADDAASGLVRSLQSASIRQDASQAAQRSLNLASAQYQEGFAD 425 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD ++ + + +++ S V LY A+G G++ Sbjct: 426 FQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466 >gi|262040396|ref|ZP_06013641.1| multidrug efflux transport outer membrane protein EefC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042259|gb|EEW43285.1| multidrug efflux transport outer membrane protein EefC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 454 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 114/464 (24%), Positives = 212/464 (45%), Gaps = 29/464 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L K+V IAL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKVVSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S + E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G S +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLSQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAG 410 Query: 408 RYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|110598063|ref|ZP_01386342.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium ferrooxidans DSM 13031] gi|110340322|gb|EAT58816.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium ferrooxidans DSM 13031] Length = 468 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 109/470 (23%), Positives = 220/470 (46%), Gaps = 33/470 (7%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---GNSKNLINIDTLKWWESFNDT 59 +LR + L + + CT Y KP + + PT S G S + I + + F D Sbjct: 9 VLRGMLMLLSLGVTACTTTGSYRKPEVAMPPTYRSGERPGGSASDSVIALMPYRSFFADK 68 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTN 115 +L L+ A+ N+ + A + I+ A++ + S R + P+ + +H +KTN Sbjct: 69 TLCLLIDSAIVNNIDLQVALKNIDYARQTLNSARLGILPTLNLGVQNTRTHPSDNGVKTN 128 Query: 116 STGQLD-------SDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +D S W++D++G+ R +SS LA + +++ + Y + Sbjct: 129 ----IDDYSVYGTSSWEVDIWGKIRSRKSSALAGYLKTGEAAKAVRTRLVADVASGYYNL 184 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ + + L + +++ L++ G + L++ + EA +SI +P +E+ Sbjct: 185 LMLDRQLESSRKNLAIADTTLKMIGLQYDAGQVTALAVQQQEAFRQSIAGSLPQIEQKIS 244 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S L G +Q+ F + + GIP+ L++NRPD+R E + Sbjct: 245 AQENALSILCG----RMPGAIQRDQTLFTLKVEDNLPSGIPSALLQNRPDVRAAELAVRG 300 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKGKIKSN 343 + A +G A++ LYPSL+L + L + S FG + P+F +G++K+ Sbjct: 301 AHADMGEAEASLYPSLTLTATGGLEAFKRSQWFTVPGSIFGVVQGAVLQPVFQRGQLKAR 360 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KIVTKLQHAVELHKKSMSLS 400 ++ ++ + ++ ++L A+ EV +AL +++ K I T + LHK + Sbjct: 361 YQQTRIKREQTELEFKLSLLKAVGEVSDALVQLDKVKVQESIAT--ERVATLHKAVSNAG 418 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 M+ +R G + L+++ + + + E+DL+ +RQ + +LY A+G G+ Sbjct: 419 ML-FRSGMATYLEVMVAQTSALQAELDLASVRRQHLTAMSELYRALGGGW 467 >gi|300693079|ref|YP_003749052.1| heavy metal cation tricomponent efflux outer membrane porin hmwc (czcc-like) [Ralstonia solanacearum PSI07] gi|299075116|emb|CBJ34398.1| Heavy metal cation tricomponent efflux outer membrane porin HmwC (CzcC-like) [Ralstonia solanacearum PSI07] Length = 494 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 104/477 (21%), Positives = 216/477 (45%), Gaps = 46/477 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDTL--KWWESF 56 +L + C VGP++ P P LP Q + G ++ ++ + +WW++F Sbjct: 10 CLLASACAVGPDFRTPAAPTASGYTEQPLPAQTAAAQTTGGEAQRFVSGMKVSEQWWQAF 69 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-----F 108 LNK++ A + T+ A + A + + + FP +Y R Sbjct: 70 QSDKLNKVIADAFAASPTLAAAQAALRQAHQQMRAQEGAYFPLLQGTYQPSRQRNAVGTI 129 Query: 109 IPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P L + T QL + +D+FG RR +ES A D+ Y Q+ A L + S ++ Sbjct: 130 SPTLASGDAIYSLHTAQLTVTYTLDVFGVNRRQVESLRAARDAQYFQLQAAYLTLASNIV 189 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + + + +I +++++ + ++ +F GA + L + + ++ E +PT Sbjct: 190 VAAVQEASLRAQIEAQQRVVEINTQLLDNLRQQFKFGAVTGLDVAAAQTQLAQAEQTLPT 249 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIR 279 L+K + ++ L G +E + ++ F + +P + + +P++L+R RPD+R Sbjct: 250 LQKQLALQRDLLAALAGRLPSEGV----GETFTF-ADFTLPQDLPVSLPSELVRQRPDVR 304 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A++G+A ++ P L+L+G+ A F N WS + FD Sbjct: 305 AAEAQLHAATAQVGVAIGNMLPQLTLSGTKGGTATVFSQMFRDGNIFWSLVGGVAQTFFD 364 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + + R A++ + ++ TV+ A + V + L +++ D ++ + + + + Sbjct: 365 GGTLLAKKRAADAGVDQAEAQYRGTVITAFQNVADTLHALDADANVLKSALKSEQAARTT 424 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 + ++ G ++L +L+ E+A + +I R A + D L+ A+G G+ Sbjct: 425 LDITTRQMGLGYVNVLAVLNAEQAY-QTATQATITAR--ASRFADTAALFQAVGGGW 478 >gi|207366715|emb|CAR82064.1| putative RND-family outer membrane protein [Serratia sp. ATCC 39006] Length = 491 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 125/484 (25%), Positives = 225/484 (46%), Gaps = 57/484 (11%) Query: 5 RAIFSLFIVLLA----GCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFN 57 RA+ + V+LA GCT+ PEY +P P+ P + G S ++ + W F Sbjct: 15 RALTPVTAVVLATFLTGCTLVPEYHRPVAPVASAWPIKAKTGVSDT--SVAAITWQTLFV 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISH 106 D L ++V++AL N + A I A+ R+ L P + AS+S+ Sbjct: 73 DPKLRQVVQLALDNNRDLKIAILNIEKAQAQYRIQRSALMPQIGIAGAEQAQRTPASVSY 132 Query: 107 RFIPNLKTNSTGQLD---SDWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLI 161 I + + LD S +++DLFG+ R + E+ L + +++ ++++I+++ Sbjct: 133 TGIGGVTRGYS--LDVGISAYELDLFGRIRSLKEEAQQDYLSTVWSR-QATQISLIAEVA 189 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY+ ++ +A L + +L G +S+L L + E+E++S + Sbjct: 190 ESYLSLAADQDLQRLAQDTLRSRQAAYDLQQSLTNVGKSSQLPLHQAESELESARYQLLL 249 Query: 222 LEKSFRMNVHNISTLLG-------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +K + + ++ L+G P+T+ L M SN P++ G+P+DL++ Sbjct: 250 ADKLVMSDSNALTLLVGTSLPASLLPSTDSLANMV--SNK-------PLSAGLPSDLLQQ 300 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 RPDI E L + A IG A++ +PS+SL S + F WSF P++ Sbjct: 301 RPDIMSAEHNLLAANADIGAARAAFFPSISLTTSAGRASNALGELFDAGGRSWSFAPQVN 360 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYIT---WQETVLNAIKEVENALT--SINEDKKIVTKL 386 LPIF G++ + + E+S E+ I +++T+ A +EV +AL S+ +D+ Sbjct: 361 LPIFSGGRLMAQL---ETSKVERNIAVAEYEKTIQTAFREVSDALAERSVVDDE--TQAQ 415 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q V+ K + I Y G L++LD +R + L ++ S + LY A+ Sbjct: 416 QKNVQAAKAAFDFVQIQYTNGATDYLNVLDAQRTLFAAQQSLIQSRLSQQNSLITLYKAL 475 Query: 447 GSGY 450 G G+ Sbjct: 476 GGGW 479 >gi|170695145|ref|ZP_02886293.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170139997|gb|EDT08177.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 523 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 123/459 (26%), Positives = 208/459 (45%), Gaps = 25/459 (5%) Query: 14 LLAGCT-VGPEYTKPHMPLLP--TQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L+ C VGP++ H + SI ++ D +WW+ F D +L L+ A Sbjct: 25 CLSACMRVGPDFHPQHESWAEHWSSASIEQVTQQATQPDIRQWWQVFADQNLESLIAQAD 84 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS----------SYASISHRFIPNLKTNSTGQ 119 N + A R+ A+ + A +P S S F N ++ Q Sbjct: 85 ANNGDVKIAGLRVLEARAQLGIAVAGRYPQVQQANAEALYSAGRRSDGF--NSRSGGYWQ 142 Query: 120 LDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + W++D +G+ R IES+ A+ A A + A + + +++ +Y R + R+ Sbjct: 143 YGAGFSIGWELDFWGRFSRAIESANASFFEAQANREDALVLLHAQVADTYFTLRTAEARL 202 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L K++ E++ F G T +L L + + + S IP E + H +S Sbjct: 203 RIARENAGLQKRSYEIALKLFKSGETDELDLQQAKTQYLGTLSSIPDFESQIVLAHHALS 262 Query: 235 TLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG P Q P + + +PA+L+ RPD+R E ++A A IG Sbjct: 263 VLLGRPPGPLPELNAQAGKQEVVPLVDRVVLQDVPAELLLRRPDVRAAELQMAAQSALIG 322 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESSA 351 +A++D YPS+SL GS+ + S G + + GP + +FD GKI +N+R ++ Sbjct: 323 VAEADFYPSVSLLGSLVWSA-GSLTGAASTLAVIAGPSVTWNLFDHGKITNNVRVQDARL 381 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 QE + +Q TV A +E ++A T+I + T L A +S+ L+ YR+G Sbjct: 382 QELAVAYQNTVREAAREADDAATAIIAALQRDTILNDAQGAAGRSLKLANTIYREGYSDF 441 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +RA + + + S + LY A+G G+ Sbjct: 442 QRVLDAQRALFAQQDAYIVNRGNAVGSLIALYKALGGGW 480 >gi|315287004|gb|EFU46419.1| putative outer membrane efflux protein OprM [Escherichia coli MS 110-3] Length = 432 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|330005866|ref|ZP_08305407.1| outer membrane efflux protein OprM [Klebsiella sp. MS 92-3] gi|328536086|gb|EGF62481.1| outer membrane efflux protein OprM [Klebsiella sp. MS 92-3] Length = 454 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 114/464 (24%), Positives = 212/464 (45%), Gaps = 29/464 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L K+V IAL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKVVSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S L E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDLSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G + +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAG 410 Query: 408 RYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|148555067|ref|YP_001262649.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148500257|gb|ABQ68511.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 503 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 123/464 (26%), Positives = 205/464 (44%), Gaps = 38/464 (8%) Query: 18 CTVGPEYTKPHMPLL--PTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 C GP+Y P + L P QF +I ++++ D +WW+SF D L +L+ A Sbjct: 25 CNAGPDYRPPSVSDLKIPDQFQASSTIAAEQDMV--DLARWWDSFEDPILTQLIDRAFAG 82 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFIPNLKTNST------ 117 NL + A R+ A+ + + P++ AS S R I + T T Sbjct: 83 NLDVDAAAARLRQARATLRGTQGQALPTAGASGSVTRSVGADSRTIIDPSTGQTIGSGGD 142 Query: 118 -----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 G D W+ DLFG RR I+++ A ++ A + + ++ S++ +Y+ AR + Sbjct: 143 TTVYRGGFDVAWEADLFGGIRRSIQAARATAEAREADLRFTQASIASEVGLNYVQARLAQ 202 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+ IA + L + EL + G S L + + IPT+E + V+ Sbjct: 203 SRLRIARENLAAQDETFELVGWRRQAGLVSSLDYEQARQLRAQTAASIPTIENDYATAVN 262 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 I+ LLG P S P + PI PA +I RPD+ E+ LA A Sbjct: 263 RIAVLLGEAPGAVTALIDSPASIPLAPGVDAPI----PAQVIERRPDVASAERSLAAESA 318 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+ + LYP+L L+GS + + N + G + PIF G+I++ I Sbjct: 319 RIGVQTAQLYPALRLSGSFSGSSTSIGNVISDGIGNLVAG--ITAPIFQGGQIRAAIVGQ 376 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ Y +++ VL A++EVENAL ++ L + E + + + YR G Sbjct: 377 RAATDAAYDAYRQAVLTALEEVENALKGREVAERREADLAVSYEAANNAARYAQLQYRSG 436 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R + + A+ A + + LY A+G G+ Sbjct: 437 LVDFQSLLDSQRTRLSSQDTAASARAARASATIQLYKALGGGWQ 480 >gi|300920630|ref|ZP_07137048.1| putative outer membrane efflux protein OprM [Escherichia coli MS 115-1] gi|300412369|gb|EFJ95679.1| putative outer membrane efflux protein OprM [Escherichia coli MS 115-1] Length = 432 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N + W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSRSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|301023988|ref|ZP_07187708.1| putative outer membrane efflux protein OprM [Escherichia coli MS 69-1] gi|300396794|gb|EFJ80332.1| putative outer membrane efflux protein OprM [Escherichia coli MS 69-1] Length = 432 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PKQFSL--SQNGLVNAADNYQNAGWRTFFIDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|206562780|ref|YP_002233543.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198038820|emb|CAR54782.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 476 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 108/455 (23%), Positives = 201/455 (44%), Gaps = 31/455 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQNLTIL 76 C++ P KP MP+ PT ++ + +L W + F D L +L+++AL+ N + Sbjct: 15 CSLAPTLVKPSMPV-PTAYTAAAAADLDANAADLGWRTMFGDRRLQRLIELALENNRDLR 73 Query: 77 QATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN------STGQLD-----S 122 A + AA+ R+ PS A + R + ++N + Q S Sbjct: 74 VAALNVEAAEAQYGIQRSARLPSIGAGANFTRQRTSDDTQSNPPLFGATQNQYGVNVGIS 133 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS-----IA 177 ++IDLFG ++S + Y D + V L+ DA +F ER++ ++ Sbjct: 134 AFEIDLFG---RVKSQSDAAFARYVATDHGRRAVQISLVGGVADA-YFAERLAHEQRQLS 189 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L ++++++L+ S + + + E ++ S +D+ ++ + + L+ Sbjct: 190 ERTLADWRQSLDLARRLKEAHQASGVDIAQAEGQVASATADLEARTRAVEQARNALRLLV 249 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G TE + + Q + + G+P++L+ RPDIR E+ L + A IG A++ Sbjct: 250 G---TELPKDLPEPLPLQQQPVMTQLPAGLPSELLFRRPDIRQAEQNLVAANADIGAARA 306 Query: 298 DLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P LSL SI + F G WSF P++ +PIF G++++ +R AE Sbjct: 307 AFFPRLSLTSSIGFLSPAMGSLFDGGQRVWSFAPQVTVPIFQGGRLRAELRLAEVRKSSA 366 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ + A +EV + + + + V ++ LS + YR G L++ Sbjct: 367 VAEYERAIQAAFREVADGIAGRETFGRQIDAQTRVVGSAERRTDLSNLRYRAGVEGRLEL 426 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 LD +R L +R + V LY A+G G Sbjct: 427 LDSQRQLYAARQALLDLRRSELGNAVALYKALGGG 461 >gi|167567779|ref|ZP_02360695.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 461 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 112/421 (26%), Positives = 205/421 (48%), Gaps = 27/421 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 WW++F D L+ L AL N ++ R + AK + SV + +PS S A I Sbjct: 24 WWKAFGDPRLDDLEVRALANNPSVQAIAARYDQAKAALASVASAQWPSVGVTAGASRARI 83 Query: 105 S-HRFIPNLKTNSTGQLDSDWKI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 S R + N ++ + +D +I DLFG+ RR +ES+ A+ D A + A+L Sbjct: 84 SADRPLTNYAQSNHSTVQNDVQIGATVSYEPDLFGRIRRSVESAQASTDQARDDLANARL 143 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + L SY+ R I + + + L +K ++ + GA S L+L++ +A++ + Sbjct: 144 VMTASLATSYLALRETDAEIDVLDRSVALQQKALDFVSAQHELGAVSGLNLMQQKAQLDA 203 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIR 273 + L H I+TL G PA F + Q+ L P + +P+DL++ Sbjct: 204 TRTQAQLLLNQRAQLEHAIATLAGTPAPTFSIPPRVQT------LAAPTLPARLPSDLLQ 257 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPD+ E+ +A + A+IG+A++ +P ++L+ G A + F + WS G L Sbjct: 258 RRPDVASAERAMAAANAQIGVARAAYFPRITLSPTLGWDATRFASLFTVPSLLWSVGASL 317 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F+ G+I++ + A++ +++TVL A +EV+NA+T + + + Q AV Sbjct: 318 AQPLFEGGRIEAGVAYAQAGYAAAQANYRQTVLTAFEEVQNAVTGLTVLDEAERRAQAAV 377 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ + L+ Y G + +D++ ++ E + Q A V L A+G G+ Sbjct: 378 DDAQRLVGLAQDRYAGGLTAYIDVIGAQQQLLTSERQEVQIRGQRAALVVYLAKALGGGW 437 Query: 451 N 451 + Sbjct: 438 S 438 >gi|21243206|ref|NP_642788.1| outer membrane protein OprN [Xanthomonas axonopodis pv. citri str. 306] gi|21108733|gb|AAM37324.1| outer membrane protein OprN precursor [Xanthomonas axonopodis pv. citri str. 306] Length = 502 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 215/479 (44%), Gaps = 50/479 (10%) Query: 16 AGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQ 70 GC +GP YTKP + + +++ L WWE +D L +LV AL Sbjct: 24 GGCMLGPNYTKPPAVADAAMRAPALHRASGADVVAAAPLNHWWEELHDPLLTQLVAQALA 83 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---------------- 114 + + A R+ A + RA+ P AS + + +T Sbjct: 84 DSPNLRAAQARLRANRALAQQRRAERLPKLNASAVYAYAEPPQTIVDTLGGLQQGQPGQP 143 Query: 115 ---------------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 S G D+ W++D FG+RR E +LA ++ A++ A++ + + Sbjct: 144 PAAGNQALDLEKTEIYSAG-FDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAA 202 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y++ R + R++IA LD +++++L + QGA S L + ++ +++ ++ Sbjct: 203 EVGQVYLNYRGLQARLAIADANLDKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQQAQ 262 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNR 275 LE + + ++ ++G P + Q + QP +P + + LIR R Sbjct: 263 RLPLEMQSQEALDQLALMVGREPGA-----LDAQLSAPQPLPMLPTQVRVDDAGALIRRR 317 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+R E++LA S A+IG A + +P +SL G ++ S +N+ P L Sbjct: 318 PDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDARTTLAVPMLRW 376 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD GK ++ + +A + + ++ TVL A+++ +AL +K + + A Sbjct: 377 SIFDFGKTRAQVEQARAGNAGRTAAYEGTVLAALQDANSALARFGSARKQLVVARQAEAS 436 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S L G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 437 ATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 495 >gi|330824004|ref|YP_004387307.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329309376|gb|AEB83791.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 470 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 108/433 (24%), Positives = 198/433 (45%), Gaps = 45/433 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF--------SIGNSKNLINIDTL---KWWESFNDTSLNKLV 65 GC+ P Y +P + LP QF G + D +WW + D L+ L Sbjct: 16 GCSTQPAYQRPAI-ALPAQFKEATAAAAQAGIWRPAQPQDAAPPEEWWRLYGDPVLDDLQ 74 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------ 119 + A N I QA R+ AA+ + RA L P+ AS S T +T Sbjct: 75 QRAAVANPGIAQAVARLRAAQAAVAGSRAALLPTLGASSSATRARGASTANTAGPATSYS 134 Query: 120 --LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERIS 175 L++ W+IDL+G R +S A + + D+A +L++ + +Y R + + + Sbjct: 135 LGLNAGWEIDLWG-RLSGAASAAEASAQASGADLAAARLSLQATAAQTYFALRAAEAQGA 193 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L Y+++ +L+ + G S + + EA+ KS ++ + E S H ++ Sbjct: 194 LLRDTLAAYEQSWQLTRNRERAGVASPADVAQAEAQYKSTQAQLLEAETSRAQIEHALAA 253 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAK 291 L+G P F +P +PA+L + RPDI E+++A + A+ Sbjct: 254 LIGLPPAAF---------GLDATARLPAPPEVPAELPSRLLERRPDIAAAERRVAAANAQ 304 Query: 292 IGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+A+S +P+L+L G + + N WS GP L L +FD G + + A Sbjct: 305 VGVAQSAFFPALTLSAAGGWRGASLGDLVGAPNLFWSLGPALALTLFDGGARSAAVESAR 364 Query: 349 SSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +S +++ V+ A++EVE+ A TS+ ++++ T+ AV +++++++ Y+ Sbjct: 365 ASLDLAAAGYRQAVITALQEVEDNLAAATSLAREEQVQTE---AVAAAQRALTIATNQYK 421 Query: 406 QGRYSLLDILDIE 418 G L++L + Sbjct: 422 AGTVGYLNVLSAQ 434 >gi|299133841|ref|ZP_07027035.1| RND efflux system, outer membrane lipoprotein, NodT family [Afipia sp. 1NLS2] gi|298591677|gb|EFI51878.1| RND efflux system, outer membrane lipoprotein, NodT family [Afipia sp. 1NLS2] Length = 498 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 112/470 (23%), Positives = 213/470 (45%), Gaps = 33/470 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID---TLKWWESFNDTSLN 62 AIF+ + LL GC + + P + P + + + D +L WW F L Sbjct: 26 AIFTAAL-LLPGCILKQDLPDPAFDI-PAAYQKDTTP--LKQDAPPSLDWWRGFRSPELT 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTN 115 L++ + NL I AT RI A + A L P+ + + S F+ N Sbjct: 82 VLMEETQRVNLDIAAATARILQADALARTAGAALLPTLDANASATRSKSSSGFLNNGTAA 141 Query: 116 STG-------QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + G L + +++DL+ + R + ++ D+ D L + + +Y Sbjct: 142 ARGTINTYSTSLSASYEVDLWAKNRDALLAAEKTADANRFDRDTVALTSMVSVANAYFQV 201 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++RI+ A + + ++ + + G S L L + E+ + + + +P L ++ Sbjct: 202 LAAQDRIATAQRNIASAQRIYDAIKTRVDAGTGSDLDLAQQESLLANQRAAVPPLRQTLT 261 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 N++ ++TL+ P E +H P G+P++L+ RPDIR QE +LA Sbjct: 262 QNINILATLVARP-PERVHIKGGSLARISAPRVTP---GLPSELLIQRPDIRRQEAQLAS 317 Query: 288 SVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A +G A++ +PS+ L G S AL+ F + +S L PIFD G+I++ Sbjct: 318 ATANVGSARAQFFPSIQLTGQGGYQSSALSA--LFMPQSAFFSLAAGLTQPIFDAGRIQA 375 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N ++ E T+++TV++A +V+ AL +I + + + V+ +++ LS Sbjct: 376 NFDLTKAQQDELLQTYRKTVISAFSDVDTALDAIKQTTNRLRLQRIVVKSSRRAFELSEK 435 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + G ++ +L+ ++ E L A+ ++YV L+ A+G G+ P Sbjct: 436 QLQAGTADIVTVLNTQQTLFTAEDTLQQAQLAWLQAYVSLFSALGGGWEP 485 >gi|167573786|ref|ZP_02366660.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 494 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 109/470 (23%), Positives = 207/470 (44%), Gaps = 39/470 (8%) Query: 14 LLAGCTVGPEYTKPHMP----LLP-----TQFSIGNSKNLINIDTL---KWWESFNDTSL 61 L+AGC VGP++ +P P +P T F+ + D WW F + Sbjct: 27 LVAGCAVGPDFVRPEPPHVDAFVPDGAARTSFTASGATQTFAPDAPLPDAWWRLFGSPEI 86 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIP-------- 110 + V A + T+ A + ++ +++ +P + + R++P Sbjct: 87 DAAVDDAFAGSATLAGAQATLRRSEHELMAGAGVFYPQVDAQAGASRQRYVPLRTGANLP 146 Query: 111 ----NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL T ST + +D++G +RR +E A D+ + A+L + S ++ + I Sbjct: 147 ASIFNLFTLST---TISYALDIWGGERRGVEGLAAQADAQRHALAAARLTLASNVVNTMI 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + I++ +++ L + I L+ + + G ++ +++ L+A S+++ +P LE+ Sbjct: 204 ARAAYADEIAVTRELIALTDEQIRLTRAQVSAGTSAYSAVLALDASRASLDASLPALEQK 263 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++TL G YPA + P L P + P++L+R RPDI E Sbjct: 264 IGQADDLLATLAGRYPAERAPPKLSLADIALPPRL--PQTV--PSELVRRRPDILQAEAA 319 Query: 285 LADSVAKIGIAKSDLYPS--LSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG+ + L+PS LS +G T S F WS G + P+F G + Sbjct: 320 LHAASANIGVVTAALFPSVTLSASGGFDATRLPSLFNAAGKTWSVGAGITAPLFHGGALW 379 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A + E +++ VL+A +V + L +++ D + A++ +++ L Sbjct: 380 YQRKAAIDAFDESSAAYRQVVLSAFAQVADTLRALDHDAAGLDAQARAMDAAHEALRLVA 439 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 I Y G L +L ++ + + A Q + V LY A+G G++ Sbjct: 440 IEYETGTAGYLQVLTADQQYRQARLAWVQASAQRLQDTVALYAALGGGWD 489 >gi|170690031|ref|ZP_02881198.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170144466|gb|EDT12627.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 477 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 104/433 (24%), Positives = 210/433 (48%), Gaps = 20/433 (4%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ ++ ++ + WW F D +++LV+ AL NL + A ER+ A++ Sbjct: 39 PAAWNVDAPQDAVSANA--WWAQFGDPVMHQLVESALTGNLDVQAAVERVRQAQDLAKQN 96 Query: 93 RADLFP----SSYASISHRFIPN----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLD 143 RA L P S+ AS S + P ++ G L + W D+FG +R + ++ A + Sbjct: 97 RAALLPELNASATASNSRQNTPPPLGYVREAGVG-LTASWTPDVFGGERLAVLAAQAQVS 155 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 + ++ +L + + +YID R + ++ I + + ++L+ + G +++L Sbjct: 156 GRQSALNEVRLALAANTAAAYIDLRWAQAQLQILSDNETIRARALKLTQQRLRYGLSTQL 215 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP 262 + + + +++ + + IP ++ + + + I+ G P + + P P Sbjct: 216 DVARAQNQLEDLRAQIPRVQSAVQHQLSLIAVYSGRTPESVDTLVLASAREIPVPTQSAP 275 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 + P++ + RPD+ + A++G++K+ YP LN + L +S+ G T Sbjct: 276 QTL--PSEALLQRPDVHTAYATVEQRAAEVGVSKAQRYPQFRLNLADGLLA-SSYLGLPT 332 Query: 323 H----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 +S PIF+ G+I +NI +ES +E + Q+T+L A+KE+E+ + + Sbjct: 333 LTDNLFSAALNATSPIFNAGRITANIDASESRMRESQLALQQTMLQALKEIEDNRSDLVN 392 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 V +L A++ +++ LS Y+ G S LD+L + A + L+ AKR+ A S Sbjct: 393 GAVQVQRLGGALDASNQALRLSSELYKGGASSFLDVLAAQEAYLRDAESLNQAKREHALS 452 Query: 439 YVDLYIAIGSGYN 451 V LY ++G G++ Sbjct: 453 AVSLYRSLGGGWD 465 >gi|91779618|ref|YP_554826.1| efflux ABC transporter outer membrane protein [Burkholderia xenovorans LB400] gi|91692278|gb|ABE35476.1| ABC efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 484 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 114/469 (24%), Positives = 216/469 (46%), Gaps = 37/469 (7%) Query: 4 LRAIFSL--FIVLLAGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFN 57 LR + ++ ++ L+ C P+Y +P P + +S + T++ WW+ F+ Sbjct: 19 LRCVCAVTACVLSLSACIDVSMPDYKRPDTPAKAS-WSDQKGAPVSAAATIEPDWWKGFH 77 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIP 110 D L+ L+ A+ N I RI+ A I +A P+ + +H+ Sbjct: 78 DPYLDTLIAKAIAGNFDIKVLAARIDVAGTQIGEAKAGALPTMDLGAGADFEKTTHQTFA 137 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + N Q++ W ID++G+ + +++ A ++ A L ++S + +Y Sbjct: 138 R-QYNVATQVN--WDIDIWGKVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQILQ 194 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 F ++I + L+ ++ + + + G + +++ +AEI + + + L +S + Sbjct: 195 FDDQIEQQQKTLETNRQILTIYDGQRRNGLVPQTQVLRQQAEINRLTNQLLDLRRSRALA 254 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADS 288 + + TL+G PA EF Q + Q + + P+ G+PA L+ RPD+ E ++ ++ Sbjct: 255 NNALCTLIGVPAGEF----QMPKGHLQQRVQLPPVPDGLPAQLLARRPDVVAAEFRVLEA 310 Query: 289 VAKIGIAKSDLYPSLSLNG-----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDKG-KIK 341 +G AK PS+SL G S ALT SF + F P + +P+ D G + Sbjct: 311 YDLVGQAKLAQLPSISLTGHGGTASFALTDLLKSFT-----YGFMPSINIPLLDPGVRAH 365 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +A+S+ EQ ++ V+ A +EVENAL ++N K+ +LQ V + Sbjct: 366 VKVTQAQSTVAEQ--QYRVAVMGAFEEVENALVNVNSHKQQRVELQQEVSRLQIVADQIQ 423 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R G S L++ + ER + +L +Q+ V LY A+G G+ Sbjct: 424 SQLRLGVVSQLEVFETERTLLDAQQELLANHQQILSDTVLLYKALGGGW 472 >gi|152972545|ref|YP_001337691.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957394|gb|ABR79424.1| putative outer membrane efflux protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 448 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 212/458 (46%), Gaps = 30/458 (6%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +FI LL AGC ++ P Y +P P+ LP G S ++ W + ND L K+ Sbjct: 1 MFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVNDARLKKV 54 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NSTGQLD- 121 V IAL N + +A I AA+ RA LFP+ A +SH + + +S Q D Sbjct: 55 VSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSSASQADG 114 Query: 122 --SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S +++DLFG+ + + + L S + + +L +I+ L +++ +++A Sbjct: 115 AVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDNSNLALA 173 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q +D + + + G S L E+ + + + + + + I+ L Sbjct: 174 QQTMDSAANSRNIVAHQMAVGTASAGDLSSAESVYQQARASVASYRTLVAQDKNAINLLA 233 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G E L + + N + G+ + ++ RPDI+ E L + A IG A++ Sbjct: 234 GETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANADIGAARA 291 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL S + D S +H WSF P + LP+F G + +R AE+ + Sbjct: 292 NFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYAEAEKKG 350 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G L Sbjct: 351 LIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAGVGDYLS 410 Query: 414 ILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 446 >gi|291513922|emb|CBK63132.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Alistipes shahii WAL 8301] Length = 460 Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 115/453 (25%), Positives = 218/453 (48%), Gaps = 23/453 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++ LA CT P++ P + + + G S + + +WWE F DT+L+ LV+ AL Sbjct: 11 VLTLAACT--PKFYPPQVATPESYVYGAGFSSDTTGVGE-RWWELFGDTTLDALVEQALA 67 Query: 71 QNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLDS--DWKI 126 N + A R+ A+ N+ +VRA P + A+ + P K + ++ W++ Sbjct: 68 NNRDVAVAAARVQQARANLKTVRAQYLPQIGAEATAEGEYTPETKIVQSYAVEPTLSWEL 127 Query: 127 DLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG +R ++ +A + A A V +L++ +++ +Y ++ +SIA Q L Sbjct: 128 SLFGALRNAKRAAKAEIAASEWALAGV---RLSLAAEVATTYFTLLEYERDLSIARQTLR 184 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L +++ L F G + ++L + + + + E+DIP ++ ++ LLG P+ Sbjct: 185 LRRESAALIDSMFRYGMSDGVALEQARSLVYTAEADIPQYCRAVEQTWLSMGILLGETPS 244 Query: 242 TEFLHYMQ-KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L + +++P I +G+P++L++ RPDIR + + A+ G A+S + Sbjct: 245 RARLSGAGLRLLTDYRP---ADIPVGLPSELLKRRPDIRQAHFNMLQAAAQAGQARSARF 301 Query: 301 PSLSLN--GSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS+SL G + + N W + PIF GK+++ R A ++ + T Sbjct: 302 PSISLTAKGGVVSSSIKGLTAANPWAWDALGSVAEPIFGFGKLRNAERAAMAAYTQSAKT 361 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++TVL A +VE AL +I + + V + + +++ YR G LD++D Sbjct: 362 YEQTVLTAFADVEKALVAIATYRSQTERTGELVLSNDRIATMTRALYRSGLSDYLDVIDA 421 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER+ + ++ Q +YV L A+G G+ Sbjct: 422 ERSLYQSQMSHVNLVVQQYINYVTLCKALGGGW 454 >gi|315299095|gb|EFU58349.1| putative outer membrane efflux protein OprM [Escherichia coli MS 16-3] Length = 432 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 211/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+P+ ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSVISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQTNLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|115524745|ref|YP_781656.1| RND efflux system outer membrane lipoprotein [Rhodopseudomonas palustris BisA53] gi|115518692|gb|ABJ06676.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris BisA53] Length = 473 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 108/456 (23%), Positives = 213/456 (46%), Gaps = 23/456 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 + V GC + + P + + P + +L WW F L +L++ A Sbjct: 19 VLAVATGGCILTQDLPDPALDV-PAGYKAARLTTRDAPPSLDWWRGFRSRELTELMEEAQ 77 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHR--FIPNLKTNSTGQLDSDWK 125 NL I A RI A + L P + A ++ R + TG + + ++ Sbjct: 78 SVNLDIAAAAARIIQADAQARITGSSLLPLVNGDADVTRRKNGAATSVSTHTGSVSASYE 137 Query: 126 IDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ID +G+ R +++LA ++A A ++ L+ ++ + +Y ++RI A++ + Sbjct: 138 IDFWGKNR--DATLAAEETASATRFDREVIALSTLASVANAYFQVLAAQDRIRTANRNIA 195 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ ++ + T G S L + + E+ + + + +P L + N++ ++TL+ P Sbjct: 196 SAERILDAIRQRLTVGTGSDLDVAQQESVLANQRAAVPPLRLTLAQNINALATLVSRPPE 255 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 K S + IP I G+P++L+ RPDIR QE +LA + A +G A++ +P Sbjct: 256 SV-----KISGGSLSQIAIPRITPGLPSELLTQRPDIRRQESRLASATANVGSARAQFFP 310 Query: 302 SLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 S+ L G S+AL F + L PIFD G++ +N ++ E Sbjct: 311 SIQLTGQAGYQSVALAA--LFTPQAAFTTAAASLAQPIFDGGRLLANFDLTKAQQDELLQ 368 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 T+++TV++A +V+NAL S+ ++ + + ++ +E +++ L+ R G ++ +L+ Sbjct: 369 TYRKTVVSAFADVDNALESVRQNTERLRLQRNVLESSRRAFGLAEQQLRAGTADIVVVLN 428 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + E L A+ ++ V L+ A+G G+ P Sbjct: 429 TQLTLFNAEDALLQAQLARLQAIVSLHQALGGGWQP 464 >gi|33599424|ref|NP_886984.1| hypothetical protein BB0435 [Bordetella bronchiseptica RB50] gi|33567020|emb|CAE30933.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 509 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 121/475 (25%), Positives = 216/475 (45%), Gaps = 52/475 (10%) Query: 17 GCTVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLV 65 GC VGP+Y KP + + LP + D L+ WW+ F D +L+ L Sbjct: 26 GCAVGPQYDKPAVAVPAAYKEAAALPAGQAGAWQAAQPAEDALRGQWWKIFGDPALDALE 85 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----------SHRFIPNLKTN 115 A + N ++ A R+ A+ R+ FP A S P T Sbjct: 86 DEAQRANHSLQAAAARLAQARALQRDARSARFPRVDAGFGPTRQRPSPASQGLEPEASTQ 145 Query: 116 ST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ GQL ++ DLFG+ ++++ A+ + A L + + + Y R Sbjct: 146 ASTLWRGQLSVAYEADLFGRVSATVDAATADSQQSEALYRSVLLALQADVAQGYFLIREL 205 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + I Q ++L + ++L ++ G S+L L + AE++S ++ +E+ Sbjct: 206 DAELRIYRQTVELRGETLKLIQRRYDAGDISELDLARARAELESARAEALGVERRRAAAE 265 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 H ++ LLG EF + QP + +N+ G+P+ L+ RPDI E+ +A + Sbjct: 266 HALAVLLGKTPAEF-------AMPAQPLARVAVNVPAGLPSSLLERRPDIAAAERAMAAA 318 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDKGK 339 A+IG A++ +P L + G+ +++ G WS G L LPIFD G+ Sbjct: 319 NARIGAARAAFFPRLDITGAAGF--ESAELGQLFEWSSRTFLLGPLVGAALSLPIFDGGR 376 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++++ RA + +E +++TVL+A +EVE+ L ++ A++ ++ L Sbjct: 377 RQASLDRARAVYEEDVANYRQTVLDAFREVEDNLANLRILADQTQAQDAALDASARAARL 436 Query: 400 SMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S YR+G S LD+++ +R +V V L + A+S V L A+G G++ Sbjct: 437 SHTQYREGSISYLDVIEADRTVLLQQRVAVQLDGER---ARSAVQLVRALGGGWD 488 >gi|77920502|ref|YP_358317.1| hypothetical protein Pcar_2912 [Pelobacter carbinolicus DSM 2380] gi|77546585|gb|ABA90147.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 533 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 114/473 (24%), Positives = 220/473 (46%), Gaps = 36/473 (7%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLL-PTQFSIGNS-KNLINID----TLKWWE 54 + +A+F+L V L GC P +P LL P G++ +N T WW+ Sbjct: 44 VKKALFALAAVTLFLPGCARLPGGIEPQAQLLDPNTLDAGSAVRNEAETGSPWPTATWWK 103 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 ++ D L+ LV+ A N ++ A RI A+ ++ L+P +S+ +++ Sbjct: 104 AYGDPQLDLLVEQATTDNPSLRLAQARIARARSLAGGAKSVLWPRINSSVVLSREKYLGQ 163 Query: 112 LKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ D + +DL+G+ R +E++L + A A+ + KLN+ + ++ +YI Sbjct: 164 TYWDNDALFDFVYNLDLWGKNRSALEAALGKVKVAEAEARLVKLNLETAVVRTYIALSLQ 223 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 IA L + + ++ + G ++ + E + + +++ ++ ++ + Sbjct: 224 YTARDIARTTLQQRRDILAITQAREVAGLATEFERSQAETPVPAARAELESITEAILLLH 283 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 + +STL G + + + S P L +PI + +PADL+ RPD+ Q ++ + Sbjct: 284 NQLSTLTGR-GPGYGEAIVRPS----PILDVPIQLPSTLPADLLGRRPDVAAQRWRVESA 338 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 I AK+ YP+++L I AL FGP + LPIF+ G+++S + Sbjct: 339 GKSIKTAKAAFYPNINLTAYIGWSALGFAQFMSAGTLAHGFGPAITLPIFEGGRLRSELG 398 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + E ++ T+L A++ V +AL ++ K ++ A L K++ ++M YR Sbjct: 399 VATADYDEAVESYNATLLEALQSVSDALVTLRSLDKQRSEADKANALAKRAYDIAMRGYR 458 Query: 406 QGRYSLLDILDIERAT-------AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD+L+ + T AKVE R+L ++ L A+G G + Sbjct: 459 AGLTNYLDVLNAQNQTLVEALRKAKVEA------RRL-DAHALLMQALGGGAD 504 >gi|330973796|gb|EGH73862.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 420 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 100/419 (23%), Positives = 201/419 (47%), Gaps = 23/419 (5%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR 107 + W + F D +L +L++ AL N + A + A + RADLFP S+ S + + Sbjct: 1 MGWRDLFRDPTLQQLIESALLNNRDLRVAALNVEAYQAQYGIQRADLFPAISATGSGTRQ 60 Query: 108 FIPNLKTNSTGQLDS----------DWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLN 155 P T + G + S +++DLFG+ R + ++SL L S A+ +L+ Sbjct: 61 RQPASITQTGGPVTSGSYSATLGISSYELDLFGRIRSLSDQASLTYLSSEEARRST-QLS 119 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++ + +Y+ R +E +++ L Y+K+++L+ GA+S L L + ++S Sbjct: 120 LVASVATAYLTWRADQELLALTQDTLMSYEKSLKLTTRSQQVGASSSLDLAQSRTSVESA 179 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + T ++ +++N++ L+G + S + G+P+DL++ R Sbjct: 180 RASLATFQRQVAQDLNNLTLLVGTEVAD-----SAPSRPLSSEWLAEVPAGLPSDLLQRR 234 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDI E +L + A IG A++ +PS++L G+ + F G + W F P++ + Sbjct: 235 PDILEAEYQLQSANASIGAARAAFFPSITLTANAGTSSTELSGLFKGGSGGWVFSPQIDI 294 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G +++++ ++ +++++ A +EV + L + K + V+ Sbjct: 295 PIFSAGSLRASLDYSKIQKDISVSKYEKSIQTAFQEVADGLAARQTYKHQLKAQSDLVQA 354 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ L+ YR G S L LD +R+ + +L + + V LY A+G G+ Sbjct: 355 NQEYYRLAERRYRIGVDSSLTFLDAQRSLFSAQQNLINDRLSQLTAEVSLYKALGGGWT 413 >gi|300949243|ref|ZP_07163275.1| putative outer membrane efflux protein OprM [Escherichia coli MS 116-1] gi|300954365|ref|ZP_07166822.1| putative outer membrane efflux protein OprM [Escherichia coli MS 175-1] gi|300318664|gb|EFJ68448.1| putative outer membrane efflux protein OprM [Escherichia coli MS 175-1] gi|300451324|gb|EFK14944.1| putative outer membrane efflux protein OprM [Escherichia coli MS 116-1] Length = 429 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 32/441 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSG 449 + A RQ+ + + LY A+G G Sbjct: 412 NYA-RQVNE--ISLYTALGGG 429 >gi|260174320|ref|ZP_05760732.1| multidrug efflux pump channel protein [Bacteroides sp. D2] Length = 457 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 33/463 (7%) Query: 7 IFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKL 64 I LF+ L+GC V Y +P M + + + + + +I +L W E F D L +L Sbjct: 9 IICLFLSAGLSGCHVYRTYERPDMTVTDSLYRQPVVAADTASIASLSWKELFTDPQLQQL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQL-- 120 ++ + N + A ++ A+ +LS + PS + + KT+ T L Sbjct: 69 IETGIANNTDLNIARLKVKEAEALLLSSKLAYLPSVSLTPQGTLSSVDGSKTSKTYDLAA 128 Query: 121 DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +DW++D+FG+ + + + A L+ + A + +++ + SY +++ I + Sbjct: 129 SADWELDIFGKLTNAKRGAKAALEQSEAYRQAVQTQLVATIANSYYTLLMLDKQLDITRR 188 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + +N+ + G T+++++ + EA S+++ + ++E+ +++S LLG Sbjct: 189 TAETWDENLRVMKALKRAGQTTEMAVAQTEASKLSVDASVLSIEQQISEMENSLSALLGM 248 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A + + + F +L + G+P L+ RPDIR +E +LA + A+S Sbjct: 249 -APQLITRSTLDNQRFPESL----STGVPLQLLHRRPDIRQKEAELAGAFYATNQARSAF 303 Query: 300 YPSLSLNGSIALTHDNSFPGYNT---HW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS++L+GS T NS G T W S L P+F++G+ +N++ A++ +E Sbjct: 304 YPSITLSGSAGWT--NSAGGSITNPGQWLLSAVGSLVQPLFNRGQNIANLKIAKAQQEEA 361 Query: 355 YITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +T+++++L+A EV +AL + K+ VT LQ AV + M S NY Sbjct: 362 LLTFRQSLLDAGTEVNDALVQWQKAQGRLALSKQQVTSLQSAVRSSELLMRHSSQNY--- 418 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++L + + E+ ++ + + ++LY A+G GY Sbjct: 419 ----LEVLTARQTLLQAELSVASNRFDEIQGVINLYHALGGGY 457 >gi|293371559|ref|ZP_06617977.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|292633507|gb|EFF52072.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] Length = 467 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 116/461 (25%), Positives = 208/461 (45%), Gaps = 37/461 (8%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 17 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTANFGN---LPWREVFTDPQLQS 73 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-Q 119 L++ L+QN +L A + + AA+ +++S R PS S F N T + Sbjct: 74 LIETGLKQNTDLLSAAQNVKAAEASLMSARLAYAPSLGLSPQGTISSFDKNAATKTYSLP 133 Query: 120 LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W++DLFGQ +R+ + +L + AY Q + V+S + Y ++ Sbjct: 134 VTASWQVDLFGQLLNSKRNAQVTLKQMK-AYRQA--VQTQVVSNIANMYYTLMMLDRQLE 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNVHN 232 I ++ KKN E A ++ +E A + + IP +E+S R + Sbjct: 191 ITKATAEILKKNAETME-AMKDAAMYSINSAGVEQSKAAYAQVLASIPDIEQSIRETENA 249 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +STLLG E H +++ Q L I ++ G+P L+ NRPD++ E LA Sbjct: 250 LSTLLG----EAPHAIKRGELEAQV-LPIELSAGVPIQLLSNRPDVKAAEMSLASCYYNT 304 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A++ YP ++L+GS T+++ PG G L P+F +G+ + ++ A+ Sbjct: 305 NSARAAFYPQITLSGSAGWTNNSGAGIVNPGKLLASVVG-SLTQPLFYRGQNIARLKAAK 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ +++Q+ +LNA EV NAL+ + + V Q VE KK+ + + G Sbjct: 364 AQEEQAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRQMQVESAKKASEDTKELFNLGT 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L +++ ++ ++ V LY A+G G Sbjct: 424 STYLEVLSAQQSYLSAQISQVSDCFDRMQAVVSLYQALGGG 464 >gi|107028348|ref|YP_625443.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686344|ref|YP_839591.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105897512|gb|ABF80470.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652059|gb|ABK12698.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 475 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 115/478 (24%), Positives = 201/478 (42%), Gaps = 46/478 (9%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSI----------GNSKNLINIDTLKWW 53 R + +L +LAGCT+ P Y +P P+ T ++ + + D L W Sbjct: 3 RTLIALVCTGVLAGCTLDPTYQRPAAPVDDTWSTVPALAQPKAAQSTAAAPLGAD-LGWR 61 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN 111 + F D L KL+++AL N + A + + RA++ P+ + S++ + Sbjct: 62 DFFKDPRLQKLIELALANNRDMRVAALNVAQYEAQYRIARANVGPAINASGSVTRERVAG 121 Query: 112 LKTNSTGQLD----SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + + + W+ID FG+ R+ +E LA D+A I ++I+ + Sbjct: 122 STSAYSSSSASVGLTSWEIDFFGRLRSLKRQALEQYLAT-DAARTSTQI---SLIATVAT 177 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ R + + IA +D + +L+ G+ S + + E + S S + + Sbjct: 178 DYLQLRSDETSLQIAQNTVDADQHTYDLTVSMMKMGSASLQDVRQAENSLASARSSLASY 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + +N+ +G P + L Q S N + I G+P+DL+ RPDI E Sbjct: 238 TRAVAQDRNNLVAEIGAPLPDDLP--QGASLMESENTFADIGEGVPSDLLARRPDIVEAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +P + L S T N F W+F P + +PIFD G Sbjct: 296 HTLKAANANIGAARAAFFPKIELTASAGTTSGSLSNLFKAGTGAWTFAPSISVPIFDFGY 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVEL 392 ++ + A+ +++ + A KEV NAL T + D+ V Q +L Sbjct: 356 NRATLDVAKVEKDIDIANYEKAIQTAFKEVSNALAGRTTYVTQVAADRDYVNSAQQYYDL 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L +LD +R + L + V LY +G G+ Sbjct: 416 AQA-------RYRSGTDSFLTLLDAQRTLYAAQQQLVTDMLAKQSNLVTLYKVLGGGW 466 >gi|225874101|ref|YP_002755560.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] gi|225792182|gb|ACO32272.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium capsulatum ATCC 51196] Length = 495 Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 113/460 (24%), Positives = 230/460 (50%), Gaps = 29/460 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINID--TLK--WWESFNDTSLNKLVKIAL 69 +AGC GP Y + +PL P Q ++G + + TL+ WW ++D +LN+L Sbjct: 26 VAGCAPGPAYRRATVPLAPAYQEAMGAQWVPASSESATLREDWWMQYHDATLNRLEAQVD 85 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSS--YASISHR-----FIPNLKTNS--TGQ- 119 N T+ AT AA+ + + RA +P++ SI+ + IP +K T + Sbjct: 86 ASNQTLAAATANYFAARAAMRAARAQYWPAATLAPSITQQRIAAIAIPGIKNTGFETAEY 145 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L + W+ DL+ + R+ + SS ++ A+ +L + L +Y + R +E+ Sbjct: 146 QFPLTASWEPDLWARVRKTVASSFYAAQASAAERANVRLLAHAALAAAYFELRGVEEQQC 205 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I + + +++ ++++ + G +++ +L +E+++K+ ++ L S +H+I+ Sbjct: 206 ILQETVHAWQQEMDVTRHLYRHGLSNEEALAAVESQLKASQAQESLLYSSRAQYLHSIAV 265 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + F K +P + +P+ G+PA+L++ RPDI E+ +A + A+IG+ Sbjct: 266 LMGESPSRF-----KLEPGSEP-ISLPVTPTGVPAELLQRRPDIAEAERMMAQANAQIGV 319 Query: 295 AKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A+S +P+++L+G+ +L+ N F + WS GP +FD G ++N+++ S Sbjct: 320 ARSAYFPNVTLSGTAGFQSLSAANWFLWPSRFWSAGPSAAETLFDAGARRANVQQYRSLY 379 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++T L A ++VE+ L +++ + Q AVE +++S + Y G Sbjct: 380 DAAVANYRQTTLTAFQQVEDQLAALHALAATRVQQQAAVEAASRALSETQTRYAAGLDPY 439 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L + + + + Q + V L A+G G+N Sbjct: 440 VNVLTAQITWLSYRQNEATLQTQQQIASVQLIEALGGGWN 479 >gi|254248764|ref|ZP_04942084.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] gi|124875265|gb|EAY65255.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] Length = 476 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 107/457 (23%), Positives = 201/457 (43%), Gaps = 35/457 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C++ P +P MP+ + + N L W F D L +L+++AL+ N + Sbjct: 15 CSLAPTLVRPSMPVPTAYTTAAAANPDANAADLGWRTMFGDRRLQRLIELALEHNRDLRV 74 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN------STGQLD-----SD 123 A + AA+ RA PS A + R + ++N + Q S Sbjct: 75 AALNVEAAEAQYGIQRAARLPSIGAGANFTRQRTSDDTQSNPPLFGATQNQYGVNVGISA 134 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS----- 175 ++IDLFG+ + + D+A+A+ D + V L+ DA +F ER++ Sbjct: 135 FEIDLFGRVKSMS------DAAFARYLATDHGRRAVQISLVGGVADA-YFAERLAHEQRQ 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + L ++++++L+ S + + + E ++ S +D+ ++ + + Sbjct: 188 LSERTLADWQQSLDLARRLKEAHQASGVDIAQAEGQVASATADLEARTRAVEQARNALRL 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G TE + + Q + + G+P++L+ RPDI+ E+ L + A IG A Sbjct: 248 LIG---TELPKDLPEPLPLQQQPVMTQLPAGLPSELLFRRPDIQQAEQNLVAANADIGAA 304 Query: 296 KSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P LSL SI + F G WSF P++ +PIF G++++ +R AE Sbjct: 305 RTAFFPRLSLTSSIGFLSPAMGSLFDGGQRAWSFAPQVTVPIFQGGRLRAELRLAEVRKS 364 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ + A +EV + + + + V ++ LS + YR G L Sbjct: 365 SAVAEYERAIQAAFREVADGIAGRETFGRQIEAQTRVVGSAERRTDLSNLRYRAGVEGRL 424 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++LD +R L +R + V LY A+G G Sbjct: 425 ELLDSQRQLYAARQALLDLRRSELGNAVALYKALGGG 461 >gi|254495774|ref|ZP_05108686.1| RND efflux system outer membrane lipoprotein [Legionella drancourtii LLAP12] gi|254354931|gb|EET13554.1| RND efflux system outer membrane lipoprotein [Legionella drancourtii LLAP12] Length = 495 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 113/481 (23%), Positives = 217/481 (45%), Gaps = 52/481 (10%) Query: 12 IVLLAG----CTVGPEYTKPHMP--------LLPTQFSIGNSKNLINIDTLK-------- 51 I+LL+G C VGP + P P LP + ++ N T + Sbjct: 14 ILLLSGLQSACMVGPNFRPPAAPKVRAYTESPLPAK-TVKTKANGGQAQTFRQDKDIPLL 72 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYAS---ISHR 107 WWE ++ +N+LVK L + ++ A + A+EN + + L P+ AS I R Sbjct: 73 WWELYHSPEINRLVKAGLINSPNLVAAAATLRQARENWKAQIGTSLLPAINASMGVIRQR 132 Query: 108 F------IPNLKTNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 + IP + + + +D+FG RR IE A +D + A L + Sbjct: 133 YSGVQIGIPGDSATFSLYNPAFNLSYTLDVFGGARRQIEGLRAQVDYQQFEEIAAHLTLT 192 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ + ++ ++ +I ++ + + ++ G S +++ + ++ ++ Sbjct: 193 SNIVTTAVNIASYQAQIDATKDLIKAEAGILNILKNQYRLGGVSNANVLTQQTLLEQSKA 252 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 +P LEKS + H++S L+G L ++ L +P + + +P+ L+R R Sbjct: 253 TLPPLEKSLSLAKHSLSVLVGAFPDGPLPTIKLD------RLTLPTELPVTLPSMLVRQR 306 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYL 332 PD+R E L + A+IG+A ++L+P ++L GS + + F N WS ++ Sbjct: 307 PDVRASEALLHAACAQIGVATANLFPQITLTGSDGWLNSSWSQLFTAPNNVWSIAAQVAQ 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F G + + R A + Q+ +++TVL A + V + L +I D + A E Sbjct: 367 PLFQGGALFAKRRAAIDAFQQSAAQYKQTVLQAFQNVADVLRAIETDARTFQAQVRAEES 426 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSG 449 S++L YR G + +++L+ ++ + ++ A+ A Y D L+ A+G G Sbjct: 427 AHASLTLITQQYRLGGVNYINLLNAQQQYQQARINRIQAQ---ATRYTDTAALFQALGGG 483 Query: 450 Y 450 + Sbjct: 484 W 484 >gi|77359513|ref|YP_339088.1| outer membrane transport protein [Pseudoalteromonas haloplanktis TAC125] gi|76874424|emb|CAI85645.1| putative outer membrane transport protein [Pseudoalteromonas haloplanktis TAC125] Length = 472 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 122/464 (26%), Positives = 219/464 (47%), Gaps = 35/464 (7%) Query: 7 IFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L IVLL+GC + + + +P Q+ S ++++ +W + LNKL Sbjct: 10 LLALSIVLLSGCASNINSQQREQAPNNVPQQWQQKTSAPVLHVQQ-QWLTQLQNPQLNKL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTG-Q 119 V+ AL+ N +LQ++ + K+ ++ A L+P S+ S S P N++ Sbjct: 69 VEQALKNNQQLLQSSYDVAIQKQQLIVSGAALWPTLDLSARTSRSKNNRPISYNNASSVS 128 Query: 120 LDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L+ +++DL+G + + ANL+ + A+ + AK +++ ++ + D I A Sbjct: 129 LNLGYEVDLWG-KLSDSNRQANLNYLAQQARFEQAKQQLVADVVKGWFD-------IVTA 180 Query: 178 HQILDLYK-------KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 Q+LDLYK +N+++ + QG L + E+ + S I T + S Sbjct: 181 KQLLDLYKHREANALQNLDIIESGYRQGLNEALDVYLARNELNNERSRIATQQASLLTTA 240 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + LLG YP +NN P + I +G+P++LI +P +R +L S Sbjct: 241 RVLERLLGDYPKGII------SANNDLPVINTDIPLGLPSELITRKPTLRANWYQLLASD 294 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A + A +PSL+L S++ T D + F + WS + PIF+ G++K+N Sbjct: 295 ANLAYAHKQRFPSLNLTASLSDTTDRVSDLFSPSSLAWSLLGSISAPIFNGGRLKANEEI 354 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A ++Q+Q + +T+ +A +VENA+T K T A E + LS Y+ Sbjct: 355 ARLNSQKQEQQYLQTLYDAFSDVENAITLQQSLKAQYTSTLEAQENALAAEQLSFEQYQS 414 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +LD + + + L K QL + V+L++A+G + Sbjct: 415 GLVSYTTVLDAQGRSFDAQSSLISIKNQLIANRVNLHLALGGDF 458 >gi|225163463|ref|ZP_03725778.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] gi|224801924|gb|EEG20205.1| RND efflux system, outer membrane lipoprotein, NodT family [Opitutaceae bacterium TAV2] Length = 506 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 110/478 (23%), Positives = 212/478 (44%), Gaps = 42/478 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTS 60 + R + ++F LAGCT+ P+Y +P P+ + + + + W + F D Sbjct: 33 SAFRLLTAVFAAALAGCTLAPDYERPAAPVADAWPTATSANTTTTHAADIPWADFFGDPR 92 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTN-- 115 L L++ L N + A R + + L+P+ + R +L Sbjct: 93 LRALIQTGLDHNRDLRTALLRAEQTRAQYRIQASYLWPTIGGDAGMVRARTPADLSATGQ 152 Query: 116 -------STGQLDSDWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNVISKLIPS 163 S G + +++DLFG+ R +++S LA ++ A A+L+ +S L Sbjct: 153 SVTASQYSVGGTLAAYEVDLFGRIRSLKTSALETWLATGEARRA----AQLSFVSTLATQ 208 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R E++++ Q L L + + L ++ G ++L L E ++ + + + Sbjct: 209 YLVERSAAEQLALGRQTLALVEDSHRLIKHRYDNGVATELDLRTAEGQVAAARATVAEYT 268 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++++ L+G P + L + NL + G+PADL++ RPDI E Sbjct: 269 RLLEQAGNSLAYLIGAPLPDDLPPPLPLTGQ---NLIADLPAGLPADLLQRRPDILQAEH 325 Query: 284 KLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +P ++L G+ + D F + WSF P++ LPIF G+ Sbjct: 326 TLRAANASIGAARAAFFPQITLTAFGGTRSADLDGLFKSGSGAWSFAPQITLPIFTGGRN 385 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ + A+ + + +++ + A +EV + L + + + Q V + +LS Sbjct: 386 RATLDVAQIQKRIEIAAYEKAIQAAFREVADGLAARASYDEQLAAQQAQVAAEQGRYNLS 445 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK-------SYVDLYIAIGSGYN 451 + Y+ G L +L ++ DL A++ L + S VDLY A+G G+ Sbjct: 446 DLRYKNGVADYLTVLTAQQ-------DLFAAQQNLIRSRSLHLISLVDLYRALGGGWQ 496 >gi|271501228|ref|YP_003334253.1| RND efflux system outer membrane lipoprotein [Dickeya dadantii Ech586] gi|270344783|gb|ACZ77548.1| RND efflux system, outer membrane lipoprotein, NodT family [Dickeya dadantii Ech586] Length = 465 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 109/460 (23%), Positives = 208/460 (45%), Gaps = 31/460 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLKWWESFNDTSLNKLVKI 67 +LL+GC++ P Y +P P+ P + G S + + W E D L ++V++ Sbjct: 12 LLLSGCSLDPHYQRPSAPV-PAAWPQGASYPATAQAPQPAEDIPWREVVVDDKLRQVVEM 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL------- 120 AL N + +A + AA+ + RA L P+ A ++ +L + S + Sbjct: 71 ALSDNRDLRKAIADVEAARAQLGEQRATLLPTINAGMNGDRSRSLISGSDSTVLSSSYGA 130 Query: 121 ---DSDWKIDLFGQRRHIESSL--ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S + +DLFG+ R + + A L SA A +L +I+ +++ + ++ Sbjct: 131 SLSTSAFTLDLFGKNRSLTGAAREAYLSSA-ATATSTRLTLIADTATAWVALATARSNLA 189 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q ++ +++ ++ + G S + + + E + +D+ + + + + + Sbjct: 190 LARQTMESAGQSLAVTRSRLRNGVVSAVDVAQAETVYQQARADVASALTTEAQDKNALDL 249 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G E L S + P+ GI + ++ RPD++ E L + A IG A Sbjct: 250 LAGRSVPEALLPTDVASLS---QAVKPVAAGISSAVLLRRPDVQAAEHTLKSANANIGAA 306 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS++L S L+ + + F G WS P + LP+FD G S +R AE+ Q Sbjct: 307 RAAFFPSITLTASNGLSSEALSSLFSGGAHVWSLAPSVSLPLFDGGSNLSALRYAEAEKQ 366 Query: 353 EQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++++TV A +EV +AL +I+E + A E +S L+ Y+ G Sbjct: 367 GYVASYEKTVQTAFREVADALARKGTIDEQQAAQRDYVTAAE---RSYQLASNRYQAGVD 423 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++LD +R L ++ + + LY +G G Sbjct: 424 TYLNVLDAQRTLYSARQSLFSLEQSRLDNLITLYNVLGGG 463 >gi|315922588|ref|ZP_07918828.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696463|gb|EFS33298.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 453 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 33/463 (7%) Query: 7 IFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKL 64 I LF+ L+GC V Y +P M + + + + + +I +L W E F D L +L Sbjct: 5 IICLFLSAGLSGCHVYRTYERPDMTVTDSLYRQPVVAADTASIASLSWKELFTDPQLQQL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQL-- 120 ++ + N + A ++ A+ +LS + PS + + KT+ T L Sbjct: 65 IETGIANNTDLNIARLKVKEAEALLLSSKLAYLPSVSLTPQGTLSSVDGSKTSKTYDLAA 124 Query: 121 DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +DW++D+FG+ + + + A L+ + A + +++ + SY +++ I + Sbjct: 125 SADWELDIFGKLTNAKRGAKAALEQSEAYRQAVQTQLVATIANSYYTLLMLDKQLDITRR 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + +N+ + G T+++++ + EA S+++ + ++E+ +++S LLG Sbjct: 185 TAETWDENLRVMKALKRAGQTTEMAVAQTEASKLSVDASVLSIEQQISEMENSLSALLGM 244 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A + + + F +L + G+P L+ RPDIR +E +LA + A+S Sbjct: 245 -APQLITRSTLDNQRFPESL----STGVPLQLLHRRPDIRQKEAELAGAFYATNQARSAF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNT---HW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS++L+GS T NS G T W S L P+F++G+ +N++ A++ +E Sbjct: 300 YPSITLSGSAGWT--NSAGGSITNPGQWLLSAVGSLVQPLFNRGQNIANLKIAKAQQEEA 357 Query: 355 YITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +T+++++L+A EV +AL + K+ VT LQ AV + M S NY Sbjct: 358 LLTFRQSLLDAGTEVNDALVQWQKAQGRLALSKQQVTSLQSAVRSSELLMRHSSQNY--- 414 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++L + + E+ ++ + + ++LY A+G GY Sbjct: 415 ----LEVLTARQTLLQAELSVASNRFDEIQGVINLYHALGGGY 453 >gi|33595142|ref|NP_882785.1| hypothetical protein BPP0433 [Bordetella parapertussis 12822] gi|33565219|emb|CAE36017.1| putative exported protein [Bordetella parapertussis] Length = 503 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 121/475 (25%), Positives = 216/475 (45%), Gaps = 52/475 (10%) Query: 17 GCTVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLV 65 GC VGP+Y KP + + LP + D L+ WW+ F D +L+ L Sbjct: 20 GCAVGPQYDKPAVAVPAAYKEAAALPAGQAGAWQAAQPAEDALRGQWWKIFGDPALDALE 79 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----------SHRFIPNLKTN 115 A + N ++ A R+ A+ R+ FP A S P T Sbjct: 80 DEAQRANHSLQAAAARLAQARALQRDARSARFPRVDAGFGPTRQRPSPASQGLEPEASTQ 139 Query: 116 ST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++ GQL ++ DLFG+ ++++ A+ + A L + + + Y R Sbjct: 140 ASTLWRGQLSVAYEADLFGRVSATVDAATADSQQSEALYRSVLLALQADVAQGYFLIREL 199 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + I Q ++L + ++L ++ G S+L L + AE++S ++ +E+ Sbjct: 200 DAELRIYRQTVELRGETLKLIQRRYDAGDISELDLARARAELESARAEALGVERRRAAAE 259 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 H ++ LLG EF + QP + +N+ G+P+ L+ RPDI E+ +A + Sbjct: 260 HALAVLLGKTPAEF-------AMPAQPLARVAVNVPAGLPSSLLERRPDIAAAERAMAAA 312 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDKGK 339 A+IG A++ +P L + G+ +++ G WS G L LPIFD G+ Sbjct: 313 NARIGAARAAFFPRLDITGAAGF--ESAELGQLFEWSSRTFLLGPLVGAALSLPIFDGGR 370 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++++ RA + +E +++TVL+A +EVE+ L ++ A++ ++ L Sbjct: 371 RQASLDRARAVYEEDVANYRQTVLDAFREVEDNLANLRILADQTQAQDAALDASARAARL 430 Query: 400 SMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S YR+G S LD+++ +R +V V L + A+S V L A+G G++ Sbjct: 431 SHTQYREGSISYLDVIEADRTVLLQQRVAVQLDGER---ARSAVQLVRALGGGWD 482 >gi|295700960|ref|YP_003608853.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295440173|gb|ADG19342.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 492 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 215/475 (45%), Gaps = 33/475 (6%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-------LKWWE 54 ++ R + + + LA CT P Y P + + P F+ ++ + + + WW Sbjct: 8 SLRRIVAACTVASLAACTTLPHYHAPSVEV-PAHFATPSATSGWTVASPADAYPRGAWWT 66 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPN 111 F D+ L+ L N T+ +A + AA+ I RA P+ A ++ +R N Sbjct: 67 LFGDSELDALEARVDVSNQTVREAVANLQAARAMIDYQRAGYAPTVTAGVAAQRYRTSQN 126 Query: 112 L-------KTN---STGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKL 160 L KT STG + + W+ DLFG+ + + AN ++ A ++ +L+V ++L Sbjct: 127 LVDHSLAGKTMPDYSTG-VAASWEPDLFGRVKDATLEAHANAQASAADLESVRLSVATQL 185 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y R + + Y + + + GA ++ + + +++S + Sbjct: 186 AADYFALRTLDREKRLLDDTVTAYAAALRIVQQQLADGAIDASAVAQAQTQLESARTADS 245 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ H I+TL+G PA+ F Q +P + I G+P+ L+ RPDI Sbjct: 246 DVDVQRAQRQHAIATLIGVPASSFALPAQ-----VEPVVVPSIPAGVPSALLERRPDIAA 300 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDK 337 E+++A + A+IG A + YP L+L+ S L P WS G +L IFD Sbjct: 301 AERRVAAANARIGEAHAAFYPDLTLSASAGLESTFFAPWLTAPSLFWSLGSQLAGTIFDG 360 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + ++ A + +++TVL A ++VE+ L+++N Q A + S+ Sbjct: 361 GRRNATLKGANAQYDAAVAGYRQTVLTAFQQVEDNLSALNTLANEAQSQQRATAAAQLSL 420 Query: 398 SLSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G + LD++ + A A + IA R+L S V L A+G G++ Sbjct: 421 KLTTNRYQAGAVNYLDVVTAQTIALANERNEEQIAGRRLDAS-VHLLEALGGGWD 474 >gi|326316695|ref|YP_004234367.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373531|gb|ADX45800.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 507 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 219/472 (46%), Gaps = 37/472 (7%) Query: 15 LAGC---TVGPEYTKPHMPLLPTQFSIG--------------NSKNLINIDTL--KWWES 55 LAGC VGP+Y P + + G + ++ D L +WW Sbjct: 38 LAGCGSLAVGPDYHVPAEAAMRDPAAAGPFQETQAQARSNAPGADAALSTDPLPPRWWHL 97 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH----- 106 F D +L+ LV+ AL N + A + + + VRA P S H Sbjct: 98 FRDPTLDALVQEALAHNTDLRVAAANLELQQAALAQVRAAEQPQLSLSGGPGFGHVSGLS 157 Query: 107 RFIPNLKTNS----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P L ++ + + +++D+ G+ RR E++ A+ A A +D+A++NV + Sbjct: 158 ELAPGLSPSNQFAYSVEAGLSYQVDVVGELRRAAEAAQADFSGAAAALDLARVNVAAGTA 217 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y A +++ +A + L K+ + + L G L + A + +E+ P Sbjct: 218 RAYALACATGQQLKVAESSVSLQKEQLGVVQLLHDAGRAGATDLARSRALLAQLEASPPA 277 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ + ++ ++ LG +Q+ + Q +P+ G A L+R RPD+R Sbjct: 278 LQAQRQAALYQLAAWLGRTPGALPAAVQQCAAVPQVAGALPVGDG--AALLRRRPDLRRS 335 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNT-HWSFGPKLYLPIFDKGK 339 E++LA + A+IG+A + LYP +SL S + T F G +T W+ GP + + + G Sbjct: 336 ERQLAAATARIGVATAQLYPKVSLGLSASSTGPAGDFLGRDTFAWNIGPLIRWSLPNTGA 395 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ I AE+ + ++ VL A++E E AL++ ++ V L+ A + + Sbjct: 396 VRARIAGAEAGTRMALASFDGAVLQALRETETALSAYRQELISVEALKRARDDSAQVARQ 455 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y GR + LD LD +R+ A E L+ A+ ++A+ V +++A+G G+ Sbjct: 456 AQRLYVGGRSAYLDALDAQRSLATAEASLAAAQARVAQEQVAVFMALGGGWE 507 >gi|300775729|ref|ZP_07085590.1| outer membrane efflux family protein [Chryseobacterium gleum ATCC 35910] gi|300505756|gb|EFK36893.1| outer membrane efflux family protein [Chryseobacterium gleum ATCC 35910] Length = 485 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 120/487 (24%), Positives = 231/487 (47%), Gaps = 51/487 (10%) Query: 2 NILRAIFSLFIVLLAGC-----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 NI+ AI ++LA C TV + K ++P Q ++ N N T W + F Sbjct: 11 NIITAI--ALSLVLASCKAPMATVIKDEVKENIPQNFNQEEQQDANN--NSGTTPWRQFF 66 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------SHRF-- 108 D +L L++ AL+ N +L + I AK +L+ + L P+ A + S R+ Sbjct: 67 TDPNLVTLIETALKNNQELLITLQEIEIAKSGVLAKKGRLSPTVSAGVGAGLKKSGRYTS 126 Query: 109 ---------------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 +P+ N L++ W+ID++ + R ES++A+ S + Sbjct: 127 EGAGDATTEIEPGKEMPDPLGNFEAGLNASWEIDIWKKLRTEKESAVAHYLSTVEGKNFV 186 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 N+I ++ +Y + ++ I Q + L ++ +E+S ++ A ++L++ K EAE+ Sbjct: 187 LSNLIEEVADNYYELLALDNQLDIIQQYIKLQQRALEISKIQKEAAAATELAVKKFEAEL 246 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ T+ + + I+ LLG YP + + NF + + GIP+ L Sbjct: 247 AKSKAAEYTIRQQITEKENEINALLGRYP-----QPIVRTKENFMSTIPQTVYTGIPSQL 301 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY------NTHW 324 + NRPDI+ E +L S + A+ + YPSL ++ ++ L +F P Y + + Sbjct: 302 LANRPDIKQAELELKASKLDVEAARKEFYPSLEISATLGL---EAFKPSYLVKMPESIAY 358 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIV 383 + +L P+ +K IK+N + A++ + + +T+LNA +V N ++ + N D+ Sbjct: 359 NLAGELAGPLINKSAIKANFQTADAKQIQALYEYDKTILNAYLDVANLMSKVKNIDQYYQ 418 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 K Q L + S+ ++ +R R L++L +R +++L AK++ + VD+Y Sbjct: 419 LKSQETKALDQ-SIDIANQLFRNSRADYLEVLLNQRDALDAKMELIEAKQKQLSTVVDIY 477 Query: 444 IAIGSGY 450 ++G G+ Sbjct: 478 KSLGGGW 484 >gi|319763732|ref|YP_004127669.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|317118293|gb|ADV00782.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] Length = 470 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 108/433 (24%), Positives = 198/433 (45%), Gaps = 45/433 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF--------SIGNSKNLINIDTL---KWWESFNDTSLNKLV 65 GC+ P Y +P + L P QF G + D +WW + D L+ L Sbjct: 16 GCSTQPAYQRPAIEL-PAQFKEATAAAAQAGIWRPAQPQDAAPPEEWWRLYGDPVLDDLQ 74 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------ 119 + A N I QA R+ AA+ + RA L P+ AS S T +T Sbjct: 75 QRAAVANPGIAQAVARLRAAQAAVAGSRAALLPTLGASSSATRARGASTANTAGPVTSYS 134 Query: 120 --LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERIS 175 L++ W+IDL+G R +S A + + D+A +L++ + +Y R + + + Sbjct: 135 LGLNAGWEIDLWG-RLSGAASAAEASAQASGADLAAARLSLQATAAQTYFALRAAEAQGA 193 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L Y+++ +L+ + G S + + EA+ KS ++ + E S H ++ Sbjct: 194 LLRDTLAAYEQSWQLTRNRERAGVASPADVAQAEAQYKSTQAQLLEAETSRAQIEHALAA 253 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAK 291 L+G P F +P +PA+L + RPDI E+++A + A+ Sbjct: 254 LIGLPPAAF---------GLDATARLPAPPEVPAELPSRLLERRPDIAAAERRVAAANAQ 304 Query: 292 IGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+A+S +P+L+L G + + N WS GP L L +FD G + + A Sbjct: 305 VGVAQSAFFPALTLSAAGGWRGASLGDLVGAPNLFWSLGPALALTLFDGGARSAAVESAR 364 Query: 349 SSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +S +++ V+ A++EVE+ A TS+ ++++ T+ AV +++++++ Y+ Sbjct: 365 ASLDLAAAGYRQAVITALQEVEDNLAAATSLAREEQVQTE---AVAAAQRALTIATNQYK 421 Query: 406 QGRYSLLDILDIE 418 G L++L + Sbjct: 422 AGTVGYLNVLSAQ 434 >gi|221067344|ref|ZP_03543449.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220712367|gb|EED67735.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 495 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/449 (25%), Positives = 198/449 (44%), Gaps = 37/449 (8%) Query: 1 MNILRAIFSLF--------IVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINI---- 47 MN ++ I SL ++LAGC P H + +P FS + Sbjct: 13 MNTMQGIRSLMPSLSALTAALVLAGCASAPPTVAEHAGVAVPASFSAQAAAAGWTQAAPA 72 Query: 48 ---DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 WW F D L+ LV+ A Q N + A R+ A+ + S A P AS Sbjct: 73 EAQSRGAWWLVFADAELSALVERAGQANTDVQTAAARLAEARALLRSADAQRQPQIGASG 132 Query: 105 SHRFIPNLKTNS--------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 L T S T L+ ++ DLFG+ R E++ + ++ A + +L Sbjct: 133 GAVRQAGLNTASGMQPATLVTAGLNFSYEADLFGRLSRASEAAREDANAREALLQSTRLM 192 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V + + +Y+ R + + Q L Y++ + L +F G ++L + +++ E+ + Sbjct: 193 VQADVAQTYLQLRSLQTERQLVEQSLAAYRETLTLIEKRFRAGDAAELDVARMQTEVSAT 252 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIP-INIGIPADLIR 273 E++ LE+ H ++ L+G AT F + QP L +P I G+PA ++ Sbjct: 253 EAETLALERQQAALTHALAVLVGDIATGF-------TLAAQPVLAALPVIPAGVPATVLA 305 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKL 330 RPD+ + + + A++G+A++ +P+++L G+ + F W G L Sbjct: 306 RRPDVSAAQASVLAAQARVGVAQAAWFPAITLTGNGGYASPELGDLFKWSARSWGIGALL 365 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD G+ + A + + + VL A +EVE+ L+++ L AV Sbjct: 366 SLPIFDGGQRAAQEEGARARLEAAVAAQRGQVLAAFREVEDQLSALRLLSGQAHVLGQAV 425 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIER 419 + +++ LS + YR G S L++LD R Sbjct: 426 QSSERATHLSDVRYRNGLVSQLELLDARR 454 >gi|207722651|ref|YP_002253087.1| outer membrane channel lipoprotein [Ralstonia solanacearum MolK2] gi|206587833|emb|CAQ18415.1| outer membrane channel lipoprotein [Ralstonia solanacearum MolK2] Length = 508 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/487 (23%), Positives = 221/487 (45%), Gaps = 49/487 (10%) Query: 4 LRAIFSLFIVLLA-GCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDT 49 +R I I LLA C VGP++ P P LPTQ + G ++ ++ Sbjct: 16 MRFIALAAICLLASACAVGPDFKTPAAPAVSGYTEQPLPTQTAAAQTTGGEAQRFVSGMK 75 Query: 50 L--KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASI 104 + +WW++F LNK++ A + T+ A + A + + + FP +Y Sbjct: 76 VSEQWWQAFRSDKLNKVIADAFAASPTLAAAQAALRQAHQQMRAQEGAYFPLVQGTYQPS 135 Query: 105 SHR-----FIPNLKTNS------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 R P L + T QL + +D+FG RR +ES A D+ Y Q+ A Sbjct: 136 RQRNAVGTISPTLASGDPIYSLHTAQLTVTYTLDVFGVNRRQVESLRAARDAQYFQLQAA 195 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L + S ++ + + + +I +++++ + ++ +F GA + L + + ++ Sbjct: 196 YLTLASNIVAAAVQEASLRAQIEAQQRVVEINTQLLDNLRRQFQFGAVTGLDVAAAQTQL 255 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPAD 270 E +PTL+K ++ L G +E + ++ F + +P + + +P+ Sbjct: 256 AQAEQALPTLQKQLAQQRDLLAALAGRLPSEGIG----ETFTF-ADFTLPQDLPVSLPSA 310 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFG 327 L+R RPD+R E++L + A++G+A ++ P L+L G+ A F N WS Sbjct: 311 LVRQRPDVRAAEEQLHAATAQVGVAIGNMLPQLTLTGTKGGTATVFSQMFRDGNIFWSLV 370 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + FD G + + R A++ + ++ TV+ A + V + L ++ D + L+ Sbjct: 371 GGVAQTFFDGGTLLAKKRAADAGVDQAEAQYRGTVITAFQNVADTLHVLDADADV---LK 427 Query: 388 HAVELHKKSMSLSMINYRQ---GRYSLLDILDIERA-TAKVEVDLSIAKRQLAKSYVDLY 443 A++ + + + I RQ G ++L +L+ E+A A + ++ + A + L+ Sbjct: 428 AALKSEQAAHTTLDITTRQMGLGYVNVLAVLNAEQAYQATTQATITARASRFADTAA-LF 486 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 487 QAVGGGW 493 >gi|78048558|ref|YP_364733.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036988|emb|CAJ24701.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 501 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 110/468 (23%), Positives = 210/468 (44%), Gaps = 32/468 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------------IDTLKWWESFNDT 59 +L+GCT+ P YT+P P+ P QF+ + I + W + F D Sbjct: 16 VLSGCTLMPRYTRPDAPV-PAQFAGTDVSAAPPAATADTAGTADAAYIADIGWRQVFTDP 74 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPN 111 +L +++ +AL N + A I A+ RA L P+ + + S IP Sbjct: 75 ALQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIEGTGTANNARTPSELAIPG 134 Query: 112 ----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +T S S +++DLFG+ R + E +L S +++++++ +Y+ Sbjct: 135 QPQVFRTFSANIGVSAYELDLFGRVRSLKEQALQQFLSTAEARRSTHISLVAEVATAYLT 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ + +A L + L F GA S+L+L + + +++ D+ Sbjct: 195 LAADQQLLQLAQSTLASQSDSYRLQQRSFELGAASQLTLRQAQTTVETARVDVERYIAQV 254 Query: 227 RMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + L+G E L + + + + N+ + G+P+ L++ RPDI E+ L Sbjct: 255 AQDRNALVLLVGTQVPVELLPHALPDNASVEGNVLASVPAGLPSQLLQRRPDILEAERNL 314 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +PS+SL S + + F WSF P L LPIF+ G+ ++ Sbjct: 315 RAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWSFVPTLTLPIFNAGRNRA 374 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A+++ + +++++ +A +EV +AL + + + Q V+ S LS Sbjct: 375 NLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQAQQALVDATADSYRLSQA 434 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +G S L LD +R+ + L + + V Y A+G G+ Sbjct: 435 RFERGIDSYLQALDAQRSLYSAQQTLINTQLSRFTNLVTFYKAMGGGW 482 >gi|301643825|ref|ZP_07243860.1| putative outer membrane efflux protein OprM [Escherichia coli MS 146-1] gi|301077807|gb|EFK92613.1| putative outer membrane efflux protein OprM [Escherichia coli MS 146-1] Length = 431 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 210/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK N STG L++ +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASLDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|296161411|ref|ZP_06844218.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295888397|gb|EFG68208.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 509 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/459 (24%), Positives = 209/459 (45%), Gaps = 28/459 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTL---KWWESFNDTSLNKLVKIAL 69 L CTVGP+Y KP T + + K DT WW + D SL+ L + Sbjct: 33 LTACTVGPDYVKPTATTAATYKELDGTGWKPAQPADTFTRGAWWSVYADPSLDALEQQVA 92 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG-------- 118 N + A R AA+ + R+ FP A+ ++ R N+ ST Sbjct: 93 SANQNVQAAEARFRAARATVAQYRSSFFPLVSATGAYSRARSSENVLHKSTAGLTLNDYL 152 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q D+ W+ DL+G+ R +E + A ++ A A L++ ++L Y + R + + Sbjct: 153 VQADASWEPDLWGRVSRSVEGAKAEAQASAADTQAALLSMQAELATDYFELRGLDQERRL 212 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 ++ Y++ +EL+ ++ G + + + + ++K+ ++ L H I+ L Sbjct: 213 LDDTIEAYRQALELTQHRYAGGIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAIAIL 272 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + F + + + +L+ RPDI E+++A+ A+IG+A Sbjct: 273 IGQPPSTFALPVAPLAAVPVVAAAGVPS-----ELLERRPDIAAAERRVAEMNAQIGVAT 327 Query: 297 SDLYPSL--SLNGSIALT-HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P+L S+ G + T + + WS GP L + D G S +A + E Sbjct: 328 AAFFPNLVLSVTGGLEATNYSQWLLAPSRLWSLGPTLAGTLLDFGGRASVKEQARAHYDE 387 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A +VE+ L ++ ++ + AV ++++++ YR G + LD Sbjct: 388 SVAQYRQTVLTAFGQVEDNLAALRVLEQEASAQDDAVRAAQRALAVVSDRYRNGAITYLD 447 Query: 414 ILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + E D +SIA+R++A S V L A+G G+N Sbjct: 448 VVVAQTTALTNERDAVSIARRRMAAS-VALIKALGGGWN 485 >gi|110597328|ref|ZP_01385616.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium ferrooxidans DSM 13031] gi|110341164|gb|EAT59632.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium ferrooxidans DSM 13031] Length = 478 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/485 (22%), Positives = 209/485 (43%), Gaps = 58/485 (11%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLL---PTQFSIGN------------SKNLINIDTLKW 52 F L L+ C++ P Y +P P+ P IG S + W Sbjct: 9 FFLAATTLSACSIAPTYVRPTAPVTKEWPVASGIGTMPPTAPSSTAPQSGEQPRTTDIGW 68 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 F L +++ +L N + AT I AA+ R+DL PS AS S F Sbjct: 69 RSMFRSPKLQSIIEESLTNNRDLRIATLNIEAARHTYRIQRSDLLPSINASGS--FTRQE 126 Query: 113 KTNSTGQLD-----------SDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKL 160 N TGQ + + +++DLFG+ R + + N A + A+ ++++++ Sbjct: 127 SRNGTGQAEITSTYTAGIGTTAYELDLFGRVRSLSNRAINQYLATEEGRKAAQTSLVAEV 186 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ E + + L +L F GA S+L + + ++S + Sbjct: 187 ANAYLTYLADVELLRLTESTLKTRLDGFDLIKRSFDLGAKSRLDVAQAATLVESARVNRA 246 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-----------INIGIPA 269 ++ + + ++ L+G P L P + +GIP+ Sbjct: 247 QYQRQVEQDRNALTLLVG--------------KEIDPKLLEPQPLADLQILNTLPVGIPS 292 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WS 325 ++ +RPDIR E L A IG A++ L+PS+SL GS + + T+ WS Sbjct: 293 VVLLDRPDIRQAEFSLKAENANIGAARASLFPSISLTGSAGFASASLSDLFVTNSSGLWS 352 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 F P++ LPIF G+++SN++ AE++ +++ + A +EV +AL + + + Sbjct: 353 FAPQVTLPIFQGGRLRSNLKLAETNRDIALARYEKAIQTAFREVADALVARATWTEQLRA 412 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + ++ ++ +++ Y G S +LD +R+ + + + + +Q + +DLY A Sbjct: 413 QRALLKESDQTSTITKARYEHGIDSYFALLDAQRSLFEAQQNEILIHQQTLANMIDLYKA 472 Query: 446 IGSGY 450 +G G+ Sbjct: 473 LGGGW 477 >gi|53722950|ref|YP_111935.1| outer membrane lipoprotein [Burkholderia pseudomallei K96243] gi|217422107|ref|ZP_03453610.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|52213364|emb|CAH39407.1| putative outer membrane lipoprotein [Burkholderia pseudomallei K96243] gi|217394338|gb|EEC34357.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 494 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/474 (22%), Positives = 210/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI +AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAAFVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALIAGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|171060376|ref|YP_001792725.1| RND efflux system outer membrane lipoprotein [Leptothrix cholodnii SP-6] gi|170777821|gb|ACB35960.1| RND efflux system, outer membrane lipoprotein, NodT family [Leptothrix cholodnii SP-6] Length = 498 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 204/476 (42%), Gaps = 39/476 (8%) Query: 6 AIFSLFIVLLAGCT---------VGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLKWWES 55 A++ LLAGC P P + P + +S + +WW S Sbjct: 27 AVWCCGAALLAGCATPLPSERSDAAPPIAVPGSWAVRPAGHADADSAPIDGAALARWWRS 86 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAK--ENILSVRA----DLFPSSYASISHRFI 109 F+D L +LV+ AL N + A R+ A+ ++ + A DL S S S R Sbjct: 87 FDDPLLGELVERALAANTDLQLARSRVIQARALRDVSAAAASPNLDLSGSVGTSQSGRGS 146 Query: 110 PNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYID 166 L++NS LD+ W+ID++G R + A LD A ++ D A + V +++ +Y+ Sbjct: 147 SALRSNSWRAGLDASWEIDVWG-RLGAGTRAAELDLATSRADRATTEAGVAAEVGLAYVQ 205 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + ++ IA L ++ +L+ + G S L + A + I L+ S Sbjct: 206 LRGSQRQLRIARDNLAALEQTAQLTQWRAQAGLVSSLDAEQARASTAQQRASIGPLQNSV 265 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPN--LYIPINIGIPADLIRNRPDIRYQEKK 284 H I+ LLG P + P L P+ G+PA ++R RPD+R E Sbjct: 266 VQAEHRIAVLLGQPPGTLRALLGSADERITPPIPLAAPMPAGVPAQVLRQRPDVRAAELA 325 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG----------PKLYLPI 334 + ++ +++ PS +++G++AL T + G + P+ Sbjct: 326 IDAESQRLAASRAAGRPSFAISGTLALQ-------AATLGALGNPAATLATLGAAVNWPL 378 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G + I+ ++ + I +Q VL A+++VENAL + + + V + Sbjct: 379 FDGGARAAQIQAQQAVQAQAQIRYQAAVLTALEDVENALADQIYTQSRLAAYEAGVASAR 438 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ Y+ G +L+ +R ++ L A+ L+ + L A+G G+ Sbjct: 439 NALLLARQRYQAGLVDFSTLLEAQRTALSLDNGLVAAQTDLSLGRIRLNKALGGGW 494 >gi|303237196|ref|ZP_07323766.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella disiens FB035-09AN] gi|302482583|gb|EFL45608.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella disiens FB035-09AN] Length = 459 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 121/469 (25%), Positives = 213/469 (45%), Gaps = 45/469 (9%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----------LKWWES 55 I +L + L GC ++ Y +P + + G +N IN D L W Sbjct: 8 IIALATLSLTGCKSLYGTYERPEVK------TSGIVRNPINADATLEGANDFGILPWRSV 61 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPN 111 F D+ L +++ AL N +L A I+ A++ + + + PS +ISH Sbjct: 62 FTDSHLQAIIEKALTNNPDLLNAALNIDIAEQQLSTAKLAFLPSVVFSPQGTISHFGDQK 121 Query: 112 LKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YID 166 T S + + W+IDLFG+ R+ E A + A Q+ K+ V ++LI + Y Sbjct: 122 EATKSYVLPISASWEIDLFGKLRN-EKMAAQM--AMIQMQDYKVAVQTRLICNVANLYYT 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + I + DL K E+ L+ G S+ EA S+++ +++ Sbjct: 179 LLMLDRQNQIVTDMADLTKNTWEMMKLQMDYGRARSTSIQSAEAAYYSVQTRAADIKRQI 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKK 284 R +++S L+G PA H N +P N+ G+ +L+ NR D+ E Sbjct: 239 REVENSLSLLMGEPAHSIAH-------GALDNQQLPSNLSNGVGIELLSNRADVHANEMA 291 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKS 342 LA I A+ YPSLS+ + ++ N P W+ L P+F KGK+K+ Sbjct: 292 LAQCFYNIQEARGRFYPSLSIAPTGGWSNGNGMVNPA-KILWNVVGNLTQPLFMKGKLKA 350 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ A++ + Y WQ ++L A EV NAL + N ++ + +++ KK++ + + Sbjct: 351 GLKVAKNQYKIAYNKWQNSILTAGAEVSNALVAYNSAQEKGKLYEQQIDILKKNVEHTQM 410 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 YRQ S L+++ +++ E+ + + Q +K + V+LY A+G G Sbjct: 411 LYRQSSSSYLEVITAQQSLLNAEI--AQVQDQFSKLQAIVNLYYALGGG 457 >gi|170698000|ref|ZP_02889082.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170137062|gb|EDT05308.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 513 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 108/443 (24%), Positives = 200/443 (45%), Gaps = 55/443 (12%) Query: 20 VGPEYTKPHM---------PLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKI 67 VGP+Y +P + P L G K D +WW+ F D L+ L Sbjct: 32 VGPDYKRPDVSTPAAFKEAPTLAAGEQAGTWKTAEPADGEHRGEWWKVFGDPVLDSLESQ 91 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---------NLKTNSTG 118 AL N + A R+ A+ + R+ FP + F P L+ TG Sbjct: 92 ALAANQNLKAAAARVEEARAATRTARSQWFPQ----VGAGFGPTRQGLSSASQLQPQGTG 147 Query: 119 ---------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 148 PTNATLWRAQGTVSYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELR 207 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + ++L + ++L +F +G S+L + + + E+ + ++D + + Sbjct: 208 QLDSDQDLYRRTVELRDQALKLVQRRFNEGDISELDVSRAKNELATAQADAVGVARRRAA 267 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKK 284 + H ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ Sbjct: 268 SEHALAILLGKAPADFA---------FKETPIVPVAVKVPAGLPSALLERRPDVSAAERA 318 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDK 337 +A + A+IG+AKS +P L + G+ A T N F + + GP L LP+FD Sbjct: 319 MAAANARIGLAKSAYFPKLDITGAFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDG 378 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + +++A + EQ +++ VL A +EVE+ L + + AV +++ Sbjct: 379 GRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLLDDQIRAQDAAVNASRRAA 438 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 +LS Y++G + LD++D ER+ Sbjct: 439 TLSRTQYQEGEVAYLDVIDSERS 461 >gi|325274556|ref|ZP_08140616.1| multidrug efflux MFS outer membrane protein, putative [Pseudomonas sp. TJI-51] gi|324100315|gb|EGB98101.1| multidrug efflux MFS outer membrane protein, putative [Pseudomonas sp. TJI-51] Length = 472 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 98/419 (23%), Positives = 194/419 (46%), Gaps = 24/419 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW F D LN V++AL N + QA + A I A +P++ + + Sbjct: 59 QWWALFQDPQLNHWVQLALAHNQDLAQADATVQAMLAGIGEFDARRWPATTVEVGATYGK 118 Query: 111 N-----LKTNSTGQLDSDWK----------IDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + L + S W+ +D++GQ R IE + A D++ A D+ +L Sbjct: 119 SADDQTLAEATDSHAPSQWQFSPGIELAYQVDVWGQVRAAIERARAQADASAAARDLVRL 178 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V+++ +Y+ + R++ A Q L +++++LS + G + L +L + Sbjct: 179 QVVTQTSRAYLAQCVYGARLAQARQSLQSLERSVQLSERQQQAGVATALDSERLLGLREQ 238 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + +P L +M ++ ++ L G A + + P + +P+ +G L+ Sbjct: 239 VRAQLPMLVARRQMALYELAMLSGQAAAAPVG-----DCSAIPTVSVPLPLGDGWRLLER 293 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E++L + + IA++DLYP +S S+ A + + GP ++ Sbjct: 294 RPDLRQAERELRAAALETEIARADLYPKVSFGASLTSSAAHLADLGDSRAVMFGIGPLIH 353 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + +A + Q Q +Q LNA+K+V AL +++ + L+ A+ Sbjct: 354 WQFPNLKANRARVGKARALQQAQVARYQGVALNALKDVRQALARYAGERQRLQVLEAALG 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ +L+ NYR G L +LD ER ++ A+ +LA++ V+L+ A+G + Sbjct: 414 HSERGFALAQNNYRAGTVDGLALLDSERELIRLRASQVEAQGRLAQAQVNLFRALGGRW 472 >gi|78192434|gb|ABB30250.1| AdeZ [Acinetobacter sp. 4365] Length = 483 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 218/457 (47%), Gaps = 25/457 (5%) Query: 9 SLFIVLLAGCTV--GPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKL 64 S + L+ C GPE P++ T S S + +I + + F D L + Sbjct: 15 SALALALSACQSMRGPE------PVVKTDIPQSYAYSASGTSIAEQGYKQFFADPRLLGV 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------ISHRFIPN--LKTNS 116 + +AL N + AT I A++ + + P+ AS +S PN T Sbjct: 69 IDLALANNRDLRTATLNIERAQQQYRITQNNQLPTIGASGSAIRQVSQSRDPNNPYSTYQ 128 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G + +++D +G+ R + +++L + S + D ++++IS++ ++++ + Sbjct: 129 VGLGVTAYELDFWGRVRSLKDAALDSYLSTQSARDSTQISLISQVAQAWLNYSFATANLR 188 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + + L+ +F G ++ L + + +++ +D+ + + ++ Sbjct: 189 LAEQTLKAQQDSYNLNKKRFDVGIDREVPLRQAQISVETARNDVANYKTQNAQAQNLLNL 248 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G + L Q Q N++ G+P+DL+ NRPD++ E L+ + A IG A Sbjct: 249 LVGQSVPQNLLPTQPVKRITQQNVFT---AGLPSDLLNNRPDVKAAEYNLSAAGANIGAA 305 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ L+P++SL GS + F WS GP L LPIFD G ++N++ +E+ + Sbjct: 306 KARLFPTISLTGSAGYASTDLSDLFKSGGFVWSIGPSLDLPIFDWGTRRANVKISETDQK 365 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++++V +A +EV +AL + + +T Q VE ++ +LS +R G S L Sbjct: 366 IALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNARFRAGIDSYL 425 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R++ E L + ++ + ++LY +G G Sbjct: 426 TVLDAQRSSYSAEQGLLLLQQANLNNQIELYKTLGGG 462 >gi|170700829|ref|ZP_02891819.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170134277|gb|EDT02615.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 497 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 118/475 (24%), Positives = 219/475 (46%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKN-----LINIDTLK---WWES 55 R + +L +V LA C+ P Y+ P + +PT ++ + D WW Sbjct: 11 RRVVALGVVTALAACSTLPPYSPPTV-AVPTHYAGAPAAQPGWHVAAPADAASRGAWWTV 69 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN- 111 FNDT LN L N T+ +A + A+ + A P+ A ++ R N Sbjct: 70 FNDTDLNALEARVDVSNQTVKKAVADLEQARATVDYQHAGFLPTVTAGVAQSRSRISQNK 129 Query: 112 LKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L ++ G+ D W+ D+FG+ R + + AN D++ A + KL+V ++L Sbjct: 130 LGSSLAGKTTPDHQVGVAASWEPDVFGRVRDAVAGAQANADASAADLQAVKLSVTAELAT 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y R + + + Y ++L + GA ++ + E ++++ + + Sbjct: 190 DYFALRSLDTQKQLLDDTVRAYADALKLLQQQLAAGAIDASAVAQAETQLEATRTQDTDI 249 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + S H I+TL+G A+ F + Q+ + +P I G+P+ L+ RPDI Sbjct: 250 DASRAQLQHAIATLVGENASTFALPPRVQAFD------VPAIPAGVPSQLLERRPDIAAA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKG 338 E+++A + A+IG A++ +P L L+ S L P + WS GP+L +FD G Sbjct: 304 ERRVAAANAQIGEARAAFFPDLVLSASAGLESGFFMPWLTAPSLFWSLGPQLVGTLFDGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + +R A + + +++TVL A ++VE+ L++++ Q A + S+ Sbjct: 364 QRSATLRGAHAQYDGEVADYRQTVLGAFQQVEDQLSALDALASEAASQQRATDAADLSLR 423 Query: 399 LSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + G S LD++ + T + + D IA R++ ++ V L A+G G++ Sbjct: 424 LTTNRFNAGAVSYLDVVTAQTIALTNRRQAD-QIAARRM-EAAVGLLKALGGGWH 476 >gi|319794015|ref|YP_004155655.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315596478|gb|ADU37544.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 493 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 32/388 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 WW +FND LN LV+ A N I A R+ A+ S AD P Sbjct: 66 WWLAFNDPVLNALVEKADVNNNNIQGAAARLAEARALARSANADRLPQIGLGAGANRGGG 125 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNV 156 AS S R P TN +++DLFG R S+ A LD+A + + +L V Sbjct: 126 LDKASASVR--PGTMTNIGATFS--YEVDLFG-RLSGASNAAKLDAAGREGLLQSTRLAV 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y+ R ++ + ++ Y + L+ + G ++L + +++ E+ S E Sbjct: 181 QAEVAQTYLQLRALDAERALMRETVEAYSDTLRLTQRRQAAGDIAELDVARVQTEVSSTE 240 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 SD L++ H ++ L+G A+ F + + I G+P ++ RP Sbjct: 241 SDALALDRQRAQVEHALAVLVGDSASSFGVRTDEWATALP-----AIPPGVPGTVLTRRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 D+ + + + A++G+A++ +P +SL G+ + F W G L LP Sbjct: 296 DVSAAQNAVLAAQARVGVAQTAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLP 355 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVE 391 IFD G+ ++ ++ A + +++ VL A +EVE+ L +I +++ +V AV Sbjct: 356 IFDGGRREAGVQGANAQLDGALASYRTQVLVAFQEVEDQLAAIRILQEQSVVQA--KAVS 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIER 419 +++ SLS YR G S LD+LD R Sbjct: 414 SAQRATSLSDTRYRNGYISQLDLLDARR 441 >gi|255013853|ref|ZP_05285979.1| multidrug efflux pump channel protein [Bacteroides sp. 2_1_7] Length = 456 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/432 (24%), Positives = 202/432 (46%), Gaps = 42/432 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 47 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEVALMTSRLS 97 Query: 96 LFPSSYASISHRFIPNLKTNSTGQ----------LDSDWKIDLFGQ----RRHIESSLAN 141 PS P T+S + + + W+ID+FG+ +R +++L+ Sbjct: 98 YLPS------LSLDPQGTTSSFNKAKASWTYNVPVSASWEIDIFGRLTNAKRQAKAALSQ 151 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + +++++ + G T+ Sbjct: 152 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQCEITTETAVRWQESLRATQALMAAGMTT 208 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + ++ + EA SIE+ + LE++ R + ++ LLG + + + + + P+L I Sbjct: 209 EAAVSQTEATCYSIETSVKDLEQTIRETENTLAVLLGETPQD-IERGRLEEQSLTPDLAI 267 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF--- 317 GIP L+ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 268 ----GIPVQLLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIVN 323 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 324 PGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQAQ 382 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K + H +E + ++ + + G + L++L ++ ++ + + Sbjct: 383 TAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDELQ 442 Query: 438 SYVDLYIAIGSG 449 + V+LY A+G G Sbjct: 443 ATVNLYQALGGG 454 >gi|290511739|ref|ZP_06551107.1| outer membrane efflux protein [Klebsiella sp. 1_1_55] gi|289775529|gb|EFD83529.1| outer membrane efflux protein [Klebsiella sp. 1_1_55] Length = 454 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 212/464 (45%), Gaps = 29/464 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L K+V IAL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKVVSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S + E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G + +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAG 410 Query: 408 RYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|254474009|ref|ZP_05087402.1| ABC-type export system, outer membrane channel protein [Pseudovibrio sp. JE062] gi|211956898|gb|EEA92105.1| ABC-type export system, outer membrane channel protein [Pseudovibrio sp. JE062] Length = 498 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 99/423 (23%), Positives = 192/423 (45%), Gaps = 29/423 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WWE F +LN V +A+ + TI QA + A+E + A L+P+ + S Sbjct: 47 EWWELFESKALNTYVSLAVANSPTIAQAEANLRQAQETAYAAGAALYPTVTGNASRNRQK 106 Query: 107 ---------RFIPNLK---TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 + NL T + L + +D++G RR+IES +AN+ + V+ A Sbjct: 107 FPIGGGGASEIVANLNPFFTTYSLSLAISYTLDVWGGTRRNIESQVANIQNNQFLVEAAH 166 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + S L+ + I + +I +I+ + +K + + +F G + +++ A ++ Sbjct: 167 LTLTSNLLNAVILEASLRGQIRATEEIIKVQQKQLSILRAQFRLGGVDESQVLQQLATLE 226 Query: 214 SIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPAD 270 ++ +P L++ + + I TL G YP + +L +P + + +P++ Sbjct: 227 QTKATLPPLQQQLVVQKNQIKTLGGFYPTQNIVKEFDLS------DLKLPRKLPLSLPSE 280 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L+ RPD+R E +L + A IG+A ++ PS + G++ D F W Sbjct: 281 LVAQRPDVRSAEAQLWQASANIGVALANQLPSFQITGNVGNESDVFNRLFFSGTGAWQIN 340 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + IFD G + S + A ++ + ++ETV+ A + NA+ ++ D + + Sbjct: 341 TSIAQTIFDAGALNSQRKAAVAAFEASAANYRETVVTAFGDTANAIAALENDARALKASL 400 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A +KS+ L+ Y G L +L + + +++L A+ V L+ A+G Sbjct: 401 AAERSARKSLRLTQQQYNVGAIDLTTLLLAVQTYQQAKINLVQAQAARFTDTVALFFALG 460 Query: 448 SGY 450 G+ Sbjct: 461 GGW 463 >gi|221066622|ref|ZP_03542727.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220711645|gb|EED67013.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 479 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 108/429 (25%), Positives = 198/429 (46%), Gaps = 23/429 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNS----KNLINIDTLKWWESFNDTSLNKLVKIA 68 LLAGC + P Y P +P+ P S GN+ + + + + L ++V +A Sbjct: 18 ALLAGCNLAPAYRAPDLPV-PETVS-GNAVPAKASEAALQQAQALQWLQSPQLREVVALA 75 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNS--------T 117 L N + A E I A+ RADL P A S R +L T T Sbjct: 76 LSNNRDLRVALENIEKARAQYGITRADLLPGITAQAQSNRTRTAGDLTTAGRSSVTEQYT 135 Query: 118 GQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 QL + +++DL+G+ R++ E+SL + ++ +++ + +++ + R+ Sbjct: 136 AQLGFASYELDLWGRIRNLSEASLQQFLQSQDNRRNVQIGLVADVANAWLTLAADQARLQ 195 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A LD K EL+ G+TS L L + + + + D+ + + + + Sbjct: 196 LARDTLDGRIKAFELTRRMHELGSTSGLVLAQNQTTVDTARGDVASYTSQVDRDRNALQL 255 Query: 236 LLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P + L Q + + + +P+ ++ RPD++ E+ L A IG Sbjct: 256 LVGGPVPAQLLPTAQTLTGAADTAALKVVPVPLPSSVLLKRPDVQAAERNLQAMNANIGA 315 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ L+PS++L GS+ D F N+ WSF P + LPIFD G+ ++N++ AES+ Sbjct: 316 ARAALFPSITLTGSVGTGSNELDRLFGNNNSTWSFIPLVKLPIFDGGRNRANVQVAESNQ 375 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + ++++V A KEV + L + + + V +K+ LS ++ G + Sbjct: 376 RIALSQYEKSVQTAFKEVADVLADRAQWGERLDAQTSMVANTQKAFDLSNARFKAGVDNY 435 Query: 412 LDILDIERA 420 L +LD +R+ Sbjct: 436 LTVLDAQRS 444 >gi|167647148|ref|YP_001684811.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167349578|gb|ABZ72313.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 502 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 116/471 (24%), Positives = 219/471 (46%), Gaps = 38/471 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLKWWESFNDTSLNKL 64 L +L + C P+ T + P ++ S +DT WW+++ DT L+ L Sbjct: 41 LAALLTSACATMPDATPARVAKAPDAYATAQSLATTTDAAWPVDT--WWKAYGDTQLDSL 98 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPN 111 + AL + T+ QA R+ A+ +A PS AS I F+P Sbjct: 99 IDEALIGSPTLAQAEARLRRAQALANQAKAAQRPSVSASGGVERSKQSYNNGIPADFVPQ 158 Query: 112 LKTNSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID-A 167 N G+L D W++D +G+ R + ++ + +A A A+L + + + +Y D A Sbjct: 159 -GYNDYGRLSLDFSWELDFWGKNRAAVAAATSEARAAQADAAQARLMLATSVAAAYADLA 217 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + ER +A + + L ++ + L + T G ++ L + EA + +++ +++ Sbjct: 218 RLYAER-DVAERSVALRQETLHLVSDRVTNGLDTRGELRQAEAGPPNARAELAAIDEQIA 276 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ LLG L ++ + +P +P N+ ADLI RPD+ + + Sbjct: 277 QTRNGLAALLGAGPDRGLTIVRPAVASLKP-FGLPANLA--ADLIGRRPDVVAAKWRAEA 333 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S +IG AK+ YP+++L +I + D F + S GP + LPIF+ G++K+N+ Sbjct: 334 SSKRIGQAKAAFYPNVNLAAAIGVQSLHLDKLFDSGSDVGSVGPAVSLPIFEGGRLKANL 393 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R AE+ + V A+++V + S K +++ + A+ ++ ++ + Y Sbjct: 394 RAAEADRDGAVAAYDSAVTQALRDVADVAASERALDKRLSESRAALAANEDGYRIAKLRY 453 Query: 405 RQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + G + ++L +E+A ++ DL R LA V L A+G G+ P Sbjct: 454 QGGLSTYQNVLIVEQALLTQRRIVADLE--SRALALD-VALVRALGGGFTP 501 >gi|254524790|ref|ZP_05136845.1| outer membrane efflux protein OprB [Stenotrophomonas sp. SKA14] gi|219722381|gb|EED40906.1| outer membrane efflux protein OprB [Stenotrophomonas sp. SKA14] Length = 471 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 108/480 (22%), Positives = 216/480 (45%), Gaps = 46/480 (9%) Query: 3 ILRAIFSL-FIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFN 57 +LRA+ + +L GC ++ P Y +P P+ P QF GN+ L W E F Sbjct: 5 LLRALAAATMTTVLGGCVSMAPRYQRPEAPV-PVQF--GNAATSETDSALAMPAWREVFV 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI--PNLK 113 + L + + +ALQ N + A ++ + RA L PS + S++ + N + Sbjct: 62 EPRLQQAIALALQNNRDLRVAVLQVEKERAQYRIQRAALLPSVDASGSVTRSRVSDANSE 121 Query: 114 TNSTGQLDSD--------WKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSY 164 T +T ++D W++DLFG+ R + + +L N ++ A+ ++++++ ++ Sbjct: 122 TGTTQITEADAVQVGISSWELDLFGRIRSLNNEALQNWLASAENQRAARTSLVAEVATAW 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + ++ Q LD ++ ++ + + QG S L L +++ +++ + L+ Sbjct: 182 LALAADGQSLAFTQQTLDSQQQTLQRTEARHAQGLASGLDLSQVQTSVEAARGALARLQT 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI--------PINIGIPADLIRNRP 276 + + L+G P L P+ ++ P+ +P+ ++ RP Sbjct: 242 QQAQDRDALQLLVGAPLDAALL----------PSAHVLDGSVALAPLPADLPSSVLLQRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLY 331 D+ E L + A IG A++ +P+L+L S AL+ F WSF P + Sbjct: 292 DVLSAEHALQAANADIGAARAAFFPTLTLTANYGHSSTALS--TLFSAGTRGWSFAPSIT 349 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF G +K+++ ++ +++ + A EV +AL + + + + V Sbjct: 350 APIFHAGALKASLDASKIGKDIGIAQYEKAIQQAFSEVADALATRDHLATQMDAQRALVA 409 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S +L+ YR G L LD +R+ + DL ++Q A + V L+ +G G + Sbjct: 410 ASQRSYTLADARYRTGLDGYLQALDAQRSLYTAQQDLIALQQQEAGNRVTLFKVLGGGAD 469 >gi|218886722|ref|YP_002436043.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757676|gb|ACL08575.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 538 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 105/448 (23%), Positives = 196/448 (43%), Gaps = 25/448 (5%) Query: 26 KPHMPL--------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 +P MP LP+ G +WW +F D +L++L+ A N + Sbjct: 62 RPDMPAAWSAGASGLPSATGAGAQAAHSGATLARWWGTFGDPALDRLLARAATANFDVRI 121 Query: 78 ATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNSTGQ---------LDSDWKI 126 A E++ A+ A L P+ S S I + S+G LD W+I Sbjct: 122 AAEKVREARAAAREAGASLGPTVTGSASGTRIRSGTGEAQSSGSRDGNVYATGLDMAWEI 181 Query: 127 DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ R E+ +A+ +A + +++++ Y+ R + +++ I Sbjct: 182 DLFGRLRATREARVADAQAAEEDRRDTLVTLLAEVATQYVTLRQAQNELALTRDIAASRA 241 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + + L + G + + + A + ++D E + + + L G E Sbjct: 242 ETLALVTDRRDAGLAGDIDVAQAAALWHAAQADAAEYENNAWAALARLERLTGAAPGELR 301 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 ++ + P +P+ G+PADL+ RPDIR E+ LA + + + ++ +P+LSL Sbjct: 302 PVLEPAAPIPVPAREVPV--GLPADLLLRRPDIRAAERTLASAASDLAATTAERWPTLSL 359 Query: 306 N---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 + GS A T + + WS P L L +FD G + I +A++ ++ + + T Sbjct: 360 SATLGSQASTVNRLLSSGSGVWSVAPALGLTLFDSGATTARIEQADARREQTALAYLSTA 419 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A++E E AL +++ ++ + L +E + ++ L+ YR G L + D ER + Sbjct: 420 RTAVEEAETALYAVDRQQRRLPDLAAVLEADRTALVLAQDRYRAGLTDFLAVADAERELS 479 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + A+ LA + LY A+G G+ Sbjct: 480 TAALTHVRARAALATRAITLYRALGGGW 507 >gi|302343215|ref|YP_003807744.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] gi|301639828|gb|ADK85150.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfarculus baarsii DSM 2075] Length = 485 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 109/458 (23%), Positives = 207/458 (45%), Gaps = 28/458 (6%) Query: 17 GC-TVGPEYTKPHMPL---LPTQFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GC ++ P+Y +P P P+ S G N + + W + F D L KL++++L Sbjct: 18 GCLSMAPDYKRPDAPTPAAWPSGPSYGPNQAAGQPVAEIGWRQFFVDPKLVKLIELSLAH 77 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD------- 121 N + A I A+ RADLFP+ A+ + R L +N + Sbjct: 78 NRDLRVAMLNIEKARAQYQIQRADLFPTVNATANGSIQRLPAELSSNGGDMIARQYTATI 137 Query: 122 --SDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERISIAH 178 S +++DLFG+ R + L A Q A ++++++++ +Y+ +E++ +A Sbjct: 138 GFSSYELDLFGRVRSLNDQALELYLATEQAARASQISLVAEVAGAYLTLAADQEQLRLAK 197 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L + + L+ G S L L + + + + D+ +++ ++ L+G Sbjct: 198 HTLTSQRASYHLTKRSHEIGVASALDLRQAQTSVDTARGDVAIYTTRAAQDINALNLLIG 257 Query: 239 YPATEFL--HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 A L M ++ + + +G+P+ ++ RPDI E +L A IG A+ Sbjct: 258 GQAPPELLPDGMPAAASAVKE-----LPVGLPSQVLIQRPDILQAEHQLKADNANIGAAR 312 Query: 297 SDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS+SL G+ + D+ F +WSF P + LPIFD G+ +N+ + + Sbjct: 313 ARFFPSISLTAGGGTASNQLDHLFRATTGYWSFVPTVNLPIFDTGRNLANLEATKVQREI 372 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++T+ A +EV +AL + + Q VE + LS +R+G S + Sbjct: 373 AVAQYEKTIQTAFREVADALAQRGTIDERLAAQQSLVEATSDAYRLSDARFRRGVDSYMS 432 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R++ + L + + V LY +G G++ Sbjct: 433 VLDSQRSSYGAQQGLINVRLSRLTNTVTLYKVLGGGWS 470 >gi|229588908|ref|YP_002871027.1| outer membrane protein [Pseudomonas fluorescens SBW25] gi|229360774|emb|CAY47632.1| outer membrane protein precursor [Pseudomonas fluorescens SBW25] Length = 485 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 217/473 (45%), Gaps = 35/473 (7%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNS-----KNLINIDTLKWWESFN 57 +++ SL + +L+GC++ P+Y +P P+ QF G + W + F+ Sbjct: 3 KSLLSLAVTAFVLSGCSLIPDYQRPEAPV-AAQFPQGPAYSSAQAPSQAAAEQGWKQFFH 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A RADLFP S+ S S + +P + + Sbjct: 62 DPALQQLIQTALVNNRDLRVAALNIDAYAAQYRIQRADLFPAVSANGSGSRQRVP-ARAS 120 Query: 116 STGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 TG+ + S +++DLFG+ R + E +L + ++++++ + + Sbjct: 121 QTGEANITSQYSATLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP--T 221 Y+ + KE + + L ++++ +L+ G S L L + +++ + T Sbjct: 181 YLTWQADKELLKLTQDTLGAFEQSFKLTSRSNEVGVASALDLSQARTSVENARVQLARYT 240 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + N + G PA S +L + G+P+DL++ RPDI Sbjct: 241 RQVAQDENSLTLLLGTGLPAN-------IASKPLSDDLLSEVPAGLPSDLLQRRPDILQA 293 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E L + A IG A++ +PS+SL G+++ F G + WSF P++ +PIF+ G Sbjct: 294 EYNLKAANANIGAARAAFFPSISLTANAGTLSPDLGGLFKGGSGTWSFAPQINIPIFNAG 353 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++++ ++ + +++ + +EV + L S K+ + + V ++ Sbjct: 354 SLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLASRETYKQQLEAQRGFVAANQDYYR 413 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ YR G S L LD +R + L + S V+LY A+G G+N Sbjct: 414 LAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWN 466 >gi|307131767|ref|YP_003883783.1| putative outer membrane multidrug efflux lipoprotein, OMF family [Dickeya dadantii 3937] gi|306529296|gb|ADM99226.1| Probable outer membrane multidrug efflux lipoprotein, OMF family precursor [Dickeya dadantii 3937] Length = 465 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 113/479 (23%), Positives = 215/479 (44%), Gaps = 49/479 (10%) Query: 4 LRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLKWWESF 56 +R I ++ +LL+GC++ P Y +P P+ P + G + +D + W E Sbjct: 1 MRVIMTVLTGAMLLSGCSLDPHYQRPSAPV-PDAWPQGAAYQAAATARQPVDDIPWREVL 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------------- 103 D L +++ +AL N + +A + AA+ + RA L P+ A Sbjct: 60 VDDRLRQVIDMALSDNRDLRKAIADVEAARAQLGEKRAALLPTINAGMDGDRSRSLSSSG 119 Query: 104 ----ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSL--ANLDSAYAQVDIAKLNVI 157 +S + +L T S + +DLFG+ R + + A L SA A +L +I Sbjct: 120 SGTVLSSSYGASLST-------SAFTLDLFGKNRSLTGAAREAYLSSA-ATAASTRLTLI 171 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +++ + +++A Q ++ +++ ++ + G S + + + E + + Sbjct: 172 ADTSTAWVALATARSNLTLARQTMESAGQSLAVTRSRLRNGVASAVDVAQAETVYQQARA 231 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 D+ + + + + + L G E L S P+ GI + ++ RPD Sbjct: 232 DVASALTTEAQDKNALDLLAGRSVPEALLPADVAS---LAQAVKPVAAGISSAVLLRRPD 288 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPI 334 ++ E L + A IG A++ +PS++L S L+ + + F G WS P + LPI Sbjct: 289 VQAAEHTLKSANANIGAARAAFFPSITLTASNGLSSEALSSLFSGGAHVWSLAPSVSLPI 348 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVE 391 F G S +R AE+ Q ++++T+ A +EV +AL +I+E + A E Sbjct: 349 FAGGANLSALRYAEAEKQGYVASYEKTLQTAFREVADALARKGTIDEQQAAQRDYATAAE 408 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +S L+ YR G + L++LD +R + + LS+ + +L + + LY +G G Sbjct: 409 ---RSYQLASNRYRAGVDTYLNVLDAQRTLYSARQTLLSLEQSRL-DNLITLYTVLGGG 463 >gi|326797856|ref|YP_004315675.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] gi|326548620|gb|ADZ77005.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] Length = 488 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 110/474 (23%), Positives = 214/474 (45%), Gaps = 54/474 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C VG +Y +PH+ L P ++ S + + I + W E F DT+L K++ AL N + Sbjct: 27 ACKVGKDYKRPHLNL-PKKYRDEISPADSVGIGNIYWREFFVDTTLRKIIDTALVSNYDM 85 Query: 76 LQATERINAAKENILSVRADLFP-----------------------SSYASISHRFIPNL 112 +A + I A + + RA+ P S Y + P Sbjct: 86 RKALKNIQIANQRVFQARAEFLPDINATLGSVNRQYRSKNFYSNPSSKYYETKGKEAPET 145 Query: 113 KTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + T Q + W++D++G+ RR E +LA Y + + +++ + Y + Sbjct: 146 LFDYTMQHMSSIGLSWELDIWGKIRRMNERALAEYLQTYEARKLLQTQLVANIAEGYYNL 205 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ +A + L L + + L+ G + L++ + E++ + +S IP LE+ Sbjct: 206 LMLDAQLEVARRNLRLTDSTLRIVKLQRDAGQVTSLAIQQTESQRLAAQSLIPQLERQVV 265 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +++ L G E + + + + + G+P ++ +RPD+R E L Sbjct: 266 IQENSLRALSG----ELPDSIPRDAALTDFLIEDSVTAGVPLYMVSHRPDVRASELALRA 321 Query: 288 SVAKIGIAKSDLYPSLSL---NGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKS 342 + A +G+ ++ YP+L++ G ++ N F PG G L P+F+K KIK+ Sbjct: 322 ANANVGVTQAYRYPTLTIEAEGGVNSMLSKNWFKIPGSLFGGIIGS-LTAPVFNKRKIKT 380 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +I A+ + + +Q+ VL+AI E+ N L + KLQ E+ + + ++ + Sbjct: 381 DIEVAKLERDKAELDFQQVVLDAINEITNTLITFK-------KLQEEYEIAENRVKVAQL 433 Query: 403 NYRQ-------GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +Q G + L+++ ++ E++L K+QL + V+LY A+G G Sbjct: 434 GIKQAGLLFKAGYATYLEVITAQQNAIDSELELVSLKQQLLLARVELYRALGGG 487 >gi|221197006|ref|ZP_03570053.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221203679|ref|ZP_03576697.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221175845|gb|EEE08274.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221183560|gb|EEE15960.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 494 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 115/471 (24%), Positives = 216/471 (45%), Gaps = 39/471 (8%) Query: 17 GCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQN 72 GCTVGP+Y P P PT + I+ T WW + +D L+ L+ AL N Sbjct: 23 GCTVGPDYRGAPAAPDTPT--FVRAPATGIDAGTPVPSAWWHALHDRRLDALIAAALAHN 80 Query: 73 ------------------------LTILQATERINAAKENILSVRADLFPSSYASISHRF 108 L AT +E +S L PS+ + S Sbjct: 81 PDLHAAQARLRAARAQLAQQRAAELPKASATVAAIRMREPDVSTLGALLPSNGSGQSGSA 140 Query: 109 IPNLKTNS----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L T + D+ W+IDLFG RR IE++ A D+ A + ++++ +++ + Sbjct: 141 PATLGTGPLQLYSAGFDATWEIDLFGGTRRAIEAASAQADAVDADLADTQVSIAAEVATA 200 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+D R ++R++++ + +L ++ ++L+ + +G + + +L ++++ + + L+ Sbjct: 201 YVDLRDRQQRLALSRRTAELQQQMLQLTQQRRARGVAADADIERLTTQVENTRASLIPLD 260 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ ++ L G + ++ + P L + +G PA L++ RPDIR E+ Sbjct: 261 AQVTESLDRLAILTGREPGTLDAELSTEAASL-PTLPASVPVGDPAALLKRRPDIRAAER 319 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKI 340 +LA S A+IG +D +P ++L G + + + F N W P L I D G+ Sbjct: 320 RLASSNAQIGEHVADYFPKVTLLGDLGFSATDPAHLFRKQNASWIGAPYLQWNILDFGRT 379 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + +R AE++ E +++ VL A+++ AL + V L S +L Sbjct: 380 RGAVRAAEAARDEADANYRKAVLGALQDANTALQRYGHQRDHVVALTKVQASATHSATLM 439 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S++D+LD +R + + ++ A+ +L K YV + ++G G+ Sbjct: 440 TERYRAGVASMIDLLDTQRESLAAQQNVIAAQAELIKDYVSVQKSLGLGWE 490 >gi|34557294|ref|NP_907109.1| outer membrane channel protein [Wolinella succinogenes DSM 1740] gi|34483010|emb|CAE10009.1| OUTER MEMBRANE CHANNEL PROTEIN [Wolinella succinogenes] Length = 482 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 117/473 (24%), Positives = 224/473 (47%), Gaps = 39/473 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNK 63 AI + IV ++GC++ P+Y P + ++P+ + G +++ L W E +L K Sbjct: 7 AIALMGIVGISGCSLAPKYEHPSV-VMPSSWEGGAHPKESVFAGGKLSWDEFVLSKNLKK 65 Query: 64 LVKIALQQN------LTILQATERINA-------------AKENILSVRADLFPSSYASI 104 ++IAL+ N L L+AT+R+ A + + ADL S A I Sbjct: 66 SIQIALENNKDLKQALINLEATQRLYGIQRADRFLQLEAQAGGSRQRIPADLSQSGEAII 125 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIP 162 H + S G S +++DLFG+ + + E++L L + YA + ++ ++ +++ Sbjct: 126 QHSY-------SVGLGVSAFELDLFGRVKSLSEAALEEYLATKYASYAV-RIALVGEVMR 177 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +I+ + ER+ I ++D +KK+ L ++ +GA+ + + + D Sbjct: 178 VWIERQRAHERVKILLGMVDSHKKSQSLIKERYEKGASGAMEYQEAVNLAIKAQMDRYKA 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + + LLG + L M+++ + L+ I +P++L++ RPDI E Sbjct: 238 QAELQQAENALVALLGLKSALELPAMEEE----EAILHGEITPYLPSELLQRRPDIGAAE 293 Query: 283 KKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L A IG A++ +P + L GS + F G + WSF P++ LPIFD GK Sbjct: 294 HRLKSKYANIGAARAAFFPRIILTANGGSSSELLSKLFDGGSGAWSFAPQITLPIFDAGK 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++++ A+ E + ++ ++ A KEV++AL+ +I + +++ +K + L Sbjct: 354 NQNSLELAKLRRDEALVEYERSIEIAFKEVKDALSLSASLHRIEKASKESMQNEEKRLKL 413 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y G S + L+ ER + AK + L+ +G G+NP Sbjct: 414 SASRYSAGMDSHVHYLEAERRWLSERLAWVEAKSADEVAMATLFKVLGGGWNP 466 >gi|152983076|ref|YP_001352716.1| outer membrane protein [Janthinobacterium sp. Marseille] gi|151283153|gb|ABR91563.1| outer membrane protein [Janthinobacterium sp. Marseille] Length = 476 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 116/464 (25%), Positives = 214/464 (46%), Gaps = 36/464 (7%) Query: 14 LLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVKIA 68 +L GC++ P Y +P +P+ P Q + N +N + + W E F D +L+++++IA Sbjct: 21 ILVGCSLAPVYERPDLPVSKTWPDQ-RLANERNSPDVTASEIDWKEFFIDQNLSQVIQIA 79 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHR------------FIPNLKTNS 116 L N + A I+ A+ AD PS S F T S Sbjct: 80 LNNNRDLRVAALNIDRARALYGVQGADRLPSVGVGTSGARQRTPADLNDKGFSDVTSTYS 139 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D FG+ +++ S A L+ Y D A+ + LI S + R+ + ++ Sbjct: 140 AGIGITSFELDFFGRIKNL--SQAALER-YIATDEARRSAQIALI-SEVAMRY--QALAA 193 Query: 177 AHQILDLYKKNIEL---SHLK----FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 H++ L + SH + QGA+S+L L + E+ +++ + + ++ Sbjct: 194 DHRLWQLANNTLSTRLDSHARQQSLLEQGASSELDLRQSESLLEAARVALAQQTRQRAVD 253 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G AT + ++ P + I +G+P+DLI RPDIR E L Sbjct: 254 QNALRLLVG--ATIDPSLLPSGMSDALPAMLADIPVGLPSDLISTRPDIRQHEAILRSEN 311 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +P +SL GS+ + F + WSF P++ LPIFD G+ ++N+ Sbjct: 312 ASIGAARAAFFPRISLTGSLGTSSSELSGLFEAGSRSWSFLPQVSLPIFDVGRNRANLNV 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A++ +++++ A +EV +AL + K+ + + LS Y Sbjct: 372 AKADRDIAIAEYEKSIQIAFREVADALAGTDTLKEELRASTAQERAERVRYVLSKQRYES 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L+ LD +R+ ++ + + ++ + LY A+G G+ Sbjct: 432 GYASYLEFLDAQRSLFAIQQKTIVTELAEMQNKIGLYKALGGGW 475 >gi|262371105|ref|ZP_06064427.1| RND efflux system [Acinetobacter johnsonii SH046] gi|262313991|gb|EEY95036.1| RND efflux system [Acinetobacter johnsonii SH046] Length = 469 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 33/454 (7%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L GC V Y P + PTQF + + + + +WW F D LN+LV L Sbjct: 18 LVGCAAVVKTPYQAPAVQT-PTQFQYDKVTSQQRQQALYADQWWTLFGDAQLNQLVDAVL 76 Query: 70 QQN-------LTILQATERINAA-KENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 +N +T+ QA R+ A EN R SS S SH F N ++++ L Sbjct: 77 TKNADLAVAGMTLKQA--RLQAELAENQQKPRV----SSTVSTSHVFDLNDGSDTSSGLS 130 Query: 122 S----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + +++DLFG+ R E+ + + ++I Y ++ E + Sbjct: 131 AKAGLSYEVDLFGKLARQTEAKRWEALATEQDLQATAQSLIGTTAKLYWQLAYYNESRTT 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L +K +L +++ GA S L L + E ++S ++ + +++S +I+ L Sbjct: 191 AEQSLATSQKLYDLVKVQYQAGAVSGLDLTQAEQSVQSQKASLSQIQQSLVETRTSIAVL 250 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L P + + P L +P I G+PAD++ RPD++ E +L +S+A Sbjct: 251 LHMP----VQQLSIDEPQRLPRLALPSIAAGLPADILSRRPDLKAAELRLRESLATKDAT 306 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YPS+SL G++ + S N + G L LP +K ++ ++ ++ Sbjct: 307 TASYYPSISLTGNLG-SSSTSLTQLLKNPALTLGANLSLPFLQYNDMKRDLAISQLDYEK 365 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++T+ A +VENAL++ E + V Q +EL +K L+ + YR G +L Sbjct: 366 AIVQYRQTLYQAFADVENALSARTELSQQVQLQQRNLELAEKVERLTKVRYRYGAVALKT 425 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +LD + T + L K+ +YV L A+G Sbjct: 426 LLDQQETTRTARLTLVNTKQSQYNAYVTLMQALG 459 >gi|150007618|ref|YP_001302361.1| multidrug efflux pump channel protein [Parabacteroides distasonis ATCC 8503] gi|149936042|gb|ABR42739.1| multidrug efflux pump channel protein [Parabacteroides distasonis ATCC 8503] Length = 454 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/432 (24%), Positives = 202/432 (46%), Gaps = 42/432 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 45 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEAALMTSRLS 95 Query: 96 LFPSSYASISHRFIPNLKTNSTGQ----------LDSDWKIDLFGQ----RRHIESSLAN 141 PS P T+S + + + W+ID+FG+ +R +++L+ Sbjct: 96 YLPS------LSLDPQGTTSSFNKAKASWTYNVPVSASWEIDIFGRLTNAKRQAKAALSQ 149 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + +++++ + G T+ Sbjct: 150 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQYEITTETAVRWQESLRATQALMAAGMTT 206 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + ++ + EA SIE+ + LE++ R + ++ LLG + + + + + P+L I Sbjct: 207 EAAVSQTEATCYSIETSVKDLEQTIRETENTLAVLLGETPQD-IERGRLEEQSLTPDLAI 265 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF--- 317 GIP L+ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 266 ----GIPVQLLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIVN 321 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 322 PGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQAQ 380 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K + H +E + ++ + + G + L++L ++ ++ + + Sbjct: 381 TAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDELQ 440 Query: 438 SYVDLYIAIGSG 449 + V+LY A+G G Sbjct: 441 ATVNLYQALGGG 452 >gi|254300992|ref|ZP_04968436.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|157811198|gb|EDO88368.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] Length = 494 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/474 (22%), Positives = 210/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI +AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAAFVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALITGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSAGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|313499810|gb|ADR61176.1| Multidrug efflux MFS outer membrane protein, putative [Pseudomonas putida BIRD-1] Length = 426 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/419 (22%), Positives = 188/419 (44%), Gaps = 24/419 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW + D LN+ V+ AL N + QA + A I A +PS+ ++ + Sbjct: 13 RWWALYQDPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDIGVAATYGR 72 Query: 110 ----PNLKTNSTGQLDSDWK----------IDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 L + S W+ +D++GQ R I+ + +++ A +D+ +L Sbjct: 73 SAADQTLAEATDSNAPSQWQFNPGIELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRL 132 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V+++ +YID + R+ A Q L +++LS + G + L +L + Sbjct: 133 QVVAQTTRAYIDQCTYAARLEAAKQALQTLDHSVQLSQRQRQAGVATALDSERLLGLREQ 192 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P L ++ ++ +S L G + + + + P L P+ G L+ Sbjct: 193 ERAQLPMLSARRQIALYELSMLSGQASVD-----EPTTCVAIPTLSTPLPAGDGWHLLER 247 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 RPD+R E++L + + I ++DLYP +S S+ + N + GP + Sbjct: 248 RPDVRQAERELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIR 307 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 + ++ + +AE+ + Q + L+A+K+V AL + +++ + L A+ Sbjct: 308 WEFPNLKANRARVSKAEALQRAQVARYHGVALSALKDVRQALARYDGERQRLQALDAALA 367 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S +L+ NYR G L +LD ER + + A+ +LA++ V+L+ A+G + Sbjct: 368 HSQHSFALAQGNYRAGTVDGLALLDSEREMISLRARHTEARGRLAQAQVNLFRALGGRW 426 >gi|288803039|ref|ZP_06408475.1| multidrug resistance protein, FusA/NodT family [Prevotella melaninogenica D18] gi|288334556|gb|EFC72995.1| multidrug resistance protein, FusA/NodT family [Prevotella melaninogenica D18] Length = 459 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/415 (25%), Positives = 187/415 (45%), Gaps = 20/415 (4%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 + L W F D L L++ AL N +L A ++ A++ + + + PS Sbjct: 52 DFGNLPWRSVFTDPHLQTLIEKALNNNPDLLNAALNVDIAEQQVKAAKLSFLPSVVFAPT 111 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVIS 158 +ISH T S T + + W++DLFG+ R + + A + AQ A+ +IS Sbjct: 112 GTISHFGTHTSSTQSYTLPVAASWEVDLFGKLRSSKKA-AQMTMMQAQDYKVYAQTTLIS 170 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + I +L L K ++ L+ G S+ EA S+++ Sbjct: 171 SVANLYYTLLMLDRQRQIVDDMLGLTKNTWDVMKLQMEFGRARSTSVQSAEAAFYSVQTQ 230 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRP 276 + + R + +S LLG PA Q + N +P N GI L+ NR Sbjct: 231 AADIRRQIRETENTLSLLLGEPA-------QTVARGSLDNQSLPANFAGGIGVQLLSNRA 283 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPI 334 D+ E LA + A+S YP+++++ + A T+ PG S L PI Sbjct: 284 DVHANEMALAQCFYNVQTARSRFYPAMTISPTGAWTNSGGMVNPG-KLLLSVVGSLTQPI 342 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F +G++K+ +R AE ++ Y TWQ ++L A EV NAL + N + Q +++ K Sbjct: 343 FMRGQLKAGLRVAEDKYKQAYNTWQNSILKAGSEVSNALVAYNAANEKEQLRQQQIDVLK 402 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K++ + + Y Q + L+++ +++ E+ + + +S V+LY A+G G Sbjct: 403 KNVEHTQMLYTQSSSTYLEVITAQQSLLNAEISQVQEQFRKLQSIVNLYKALGGG 457 >gi|54296061|ref|YP_122430.1| hypothetical protein lpp0079 [Legionella pneumophila str. Paris] gi|53749846|emb|CAH11227.1| hypothetical protein lpp0079 [Legionella pneumophila str. Paris] Length = 479 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 211/484 (43%), Gaps = 57/484 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL----------LPTQFSIGNSKNLINIDTLKWWESF 56 I I ++ C+ P+Y +P MP+ +P + I +SK WWE + Sbjct: 6 ILGCVIFMVTSCSFAPKYERPLMPVPEHFKETGKWVPAKTVIPSSK------ITPWWEVY 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 ND LNKL + N + + R A + RA FPS +++ N + S Sbjct: 60 NDPVLNKLESLIEVSNQDLKKIFYRYQEALALVQVSRAGFFPSIMGTLNA----NRQQTS 115 Query: 117 TGQLDS---------------DWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKL 160 T D +++ID +G R+ ++ N A A++ L++ ++L Sbjct: 116 TTMADPSTIPLYNNYIIGSQVNYEIDAWGSIRNAVAAQQNTAHATEAELAAISLSLHAEL 175 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y R E I + YKK + L+ ++ GA+ + + E ++++ ++ Sbjct: 176 ASDYFSLRGCDESQRILDATVAAYKKALYLNKKRYHGGASPIEDVDQAETQLENAKTAAA 235 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + H I+ L+G +F K S + + +P+ L+ RPDI Sbjct: 236 DMRLKRAQFEHAIAILIGQFPADFSLAPAKLSRTL-----VTVAPDLPSTLLERRPDIAA 290 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYL----- 332 E ++ + A IG+A++ +P L L G I + N + WS GP L Sbjct: 291 AEFRVQAANAAIGVARAAFFPVLDLTGIIGFQSQSLSNLISKPSLIWSLGPISTLALAQP 350 Query: 333 ----PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 PIF+ GK+ ++ A++S E +++TVL A +EVE++L ++ + K + + Sbjct: 351 LVAQPIFEGGKLVGQLKYAKASYFETVANYRQTVLTAFQEVEDSLVAVKQLDKEIRSQRA 410 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL--SIAKRQLAKSYVDLYIAI 446 A + K++++ + Y G + LD++ +E + E+ +RQ+A V L A+ Sbjct: 411 ATQAAKRALTQANNRYSGGIVTFLDVVVVENTALQTELAAVNVFTRRQIAS--VQLIKAL 468 Query: 447 GSGY 450 G G+ Sbjct: 469 GGGW 472 >gi|308049474|ref|YP_003913040.1| RND efflux system, outer membrane lipoprotein, NodT family [Ferrimonas balearica DSM 9799] gi|307631664|gb|ADN75966.1| RND efflux system, outer membrane lipoprotein, NodT family [Ferrimonas balearica DSM 9799] Length = 482 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/455 (23%), Positives = 208/455 (45%), Gaps = 26/455 (5%) Query: 14 LLAGCTVGPEYTKPHMP---LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L +GC++ P+Y P P L P S G S +L N W + D L L++ +L+ Sbjct: 14 LASGCSMAPDYETPPSPVDELWP--ISAGES-DLGNSAIEDWRQFVLDPRLQVLIERSLE 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQLDSDWKIDL 128 N + A + + A+ R++ FP+ A S++ + T + + +DL Sbjct: 71 NNRDLRIAIQTLRRAEALYGVQRSEKFPNIDLGAQGSNQRLGEAVTGGASTVQRQYSVDL 130 Query: 129 FGQRRHIE--SSLANLDSA----YAQVDIAKLN----VISKLIPSYIDARHFKERISIAH 178 I+ LA+L+ Y + A+ N ++S++I +Y+ + +++A Sbjct: 131 GMTGYEIDFWGRLASLEEQALQNYLATEEARRNTHIALVSQVITAYLTLAADRALLNLAR 190 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L+ ++ L+ F G + L + + + + + D+ +++ ++ L+G Sbjct: 191 ETLETQSASLSLTQQSFDNGVATGLDVAQAQVTVAIAQVDVANFTNRVAADINALAVLVG 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 L + S P+ +G+P+ ++ RPDIR E L + A IG A++ Sbjct: 251 TGYDPIL--LPDGSREIALG---PVEVGMPSAMLMQRPDIRSAEHSLMAANANIGAARAT 305 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL G ++ D+ F G W+F P L +PIF G+++ N+ A++ + Sbjct: 306 FFPNISLTATAGFLSGDLDDLFSGDARSWNFTPSLTMPIFHWGELRGNLEVAKADREIAL 365 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++T+ A +EV +AL + Q V ++ S LS + +RQG + +L Sbjct: 366 AQYEQTIQLAFQEVADALAARRNLYDQFLAQQQLVAAYRDSYELSDLRFRQGVDNFFSVL 425 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D +R + E DL + + V L+ A+G G+ Sbjct: 426 DSQRNYYQAEQDLISLRLTQQANLVALFKAMGGGW 460 Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust. Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 16/192 (8%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-------SIALTHDNSFPGYNTHW 324 + N D+R + L + A G+ +S+ +P++ L A+T S Sbjct: 69 LENNRDLRIAIQTLRRAEALYGVQRSEKFPNIDLGAQGSNQRLGEAVTGGASTVQRQYSV 128 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA----IKEVENALTSINEDK 380 G Y F G++ S E A + Y+ +E N + +V A ++ D+ Sbjct: 129 DLGMTGYEIDF-WGRLAS----LEEQALQNYLATEEARRNTHIALVSQVITAYLTLAADR 183 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 ++ + +E S+SL+ ++ G + LD+ + A +VD++ ++A Sbjct: 184 ALLNLARETLETQSASLSLTQQSFDNGVATGLDVAQAQVTVAIAQVDVANFTNRVAADIN 243 Query: 441 DLYIAIGSGYNP 452 L + +G+GY+P Sbjct: 244 ALAVLVGTGYDP 255 >gi|167589857|ref|ZP_02382245.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 478 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/426 (22%), Positives = 199/426 (46%), Gaps = 30/426 (7%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSY 101 ++D WW F+D L+ L+ L NL + A ER+ A+ + R+ L P +++ Sbjct: 47 DVDAATWWAQFHDPVLDALIATVLDANLDLQAAAERVKQAQALTVQKRSALLPELDANAH 106 Query: 102 ASISHRFIPN----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 + + + P +K G L W D+FG +R + ++ A L D +L + Sbjct: 107 GAYARQNTPPPLGYVKQAGAG-LALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLAL 165 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + +Y+D R ++ + I + ++ ++L+ + G +++L + + + ++ ++E Sbjct: 166 AADTASAYVDLRWAQQELRILQDNAQIRQRALDLTRKRQAFGLSTELDVTRAQNQLDALE 225 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNR 275 + IP + ++ I+ G + Q+ + P P + P+ + R Sbjct: 226 ARIPPTQAQISHQLNLIAVYSGRTPESVDKLVLAQAGDIPAPPDGSPATL--PSQALLRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWS 325 PD+ ++ A++G+AK++ YP SLN G +A ++ DN F + S Sbjct: 284 PDVLSAYARVEQRAAQVGVAKAERYPKFSLNLTDGLLAASYLGLPTLTDNLFSAALSATS 343 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 PIF+ G+I ++I ++ES +E + ++T+L A++E+E+A + + Sbjct: 344 -------PIFNAGRITADIAQSESRMRESELGLRQTMLQALREIEDARAGLVSTTAATQR 396 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L A+ K++ L+ Y+ G LD+L + + L+ +R+ A S V LY + Sbjct: 397 LNSALAASDKALGLANQLYKGGATDFLDVLSAQEVYLRDSDALNQVRREHALSAVALYRS 456 Query: 446 IGSGYN 451 +G G++ Sbjct: 457 LGGGWS 462 >gi|294650749|ref|ZP_06728099.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292823341|gb|EFF82194.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 467 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/458 (24%), Positives = 219/458 (47%), Gaps = 23/458 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + S + L C + +P FS N I K + F+D L ++++ Sbjct: 13 VISTLTIALTACVSMQAPSPVIRSEIPQSFSHANGGTSIAEQGYK--DFFSDPRLLQVIE 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN---STGQLD 121 I+L+ N + AT I A++ R D P + S + P++ N ST Q+ Sbjct: 71 ISLENNRDLRTATLNIQRAQQQYQITRNDQRPMIGATGSAVRQVNPSINPNNPYSTFQVG 130 Query: 122 ---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +++D +G+ + + +++L + + D +++++S++ ++++ KE +S+A Sbjct: 131 LGVTAYELDFWGRVKSLKDTALNQYLATQSARDATQISLVSQITQAWLNYAFAKENLSLA 190 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L + EL+ +F G S++ L + + +++ +D+ + + ++ L Sbjct: 191 EQTLKAQLDSYELNKKRFHVGIDSEVPLRQAQISVETARNDVANYKTQVLQAQNLLNLLA 250 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G + L Q SN Q + G+ +DL+ NRPD++ E +L + A IG AK+ Sbjct: 251 GQTIPQDLLPHQAISNITQDKTFA---TGLSSDLLNNRPDLKAAEYQLRAAGANIGAAKA 307 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++P++SL GS ++ F WS GP + LPIFD G K+N++ +E+ + Sbjct: 308 RMFPTISLTGSAGYASTELNDLFKSGGFSWSIGPSIDLPIFDWGTRKANVKISETDQKIA 367 Query: 355 YITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++++ A +EV +AL + I+E +L A + K LS +R G S Sbjct: 368 LSEYEKSIQAAFREVNDALAAHAHIDERLDAQRRLVSATDTTYK---LSSARFRAGIDSY 424 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +LD +R+ + L I ++ + ++LY A+G G Sbjct: 425 LTVLDAQRSAYAAQQGLLILEQTKLNNQIELYKALGGG 462 >gi|206580081|ref|YP_002235938.1| multidrug efflux transporter EefC [Klebsiella pneumoniae 342] gi|206569139|gb|ACI10915.1| multidrug efflux transporter EefC [Klebsiella pneumoniae 342] Length = 454 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 216/465 (46%), Gaps = 31/465 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L K+V IAL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKVVSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S + E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G + +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ + T+++++ +A K+V +AL + +++ + Q+ V + S+ ++M +Y+ Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRVTLSEELDAQRQY-VAAEQTSLDIAMKSYQA 409 Query: 407 GRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 410 GVGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|170699992|ref|ZP_02891018.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170135092|gb|EDT03394.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 497 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 123/500 (24%), Positives = 217/500 (43%), Gaps = 66/500 (13%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---------------SIGNSKNLIN 46 N RA ++ GC++ P Y P + ++P F +G K Sbjct: 6 NFTRAASITVLLAAGGCSLAPNYVTPAV-VVPLGFKEASPSSDAPVASAAGMGAWKAAEP 64 Query: 47 IDTLK---WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---S 100 D WW F + LN L A N + A R+ ++ + A LFPS Sbjct: 65 ADGAARGAWWTIFGEAKLNSLEDAAQAANPGLAAAAARVKQSRAVQQAASASLFPSLDAG 124 Query: 101 YASISHRFIPN---LKTNSTGQLDSDWKI--------DLFGQ-RRHIESSLANLDSAYAQ 148 + +F P L ++ G + W+ DLFG+ + +S A+ + A Sbjct: 125 FGPTRQKFSPASQFLSDDANGPFQTFWRAQVGASYEADLFGRVSDSVAASKADAQQSEAL 184 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 L + + + Y R +++ + + L L+ +F G +L L + Sbjct: 185 YRSVLLALQADVAQQYFTLRELDAELAVFDRTIALRDDAWRLAQHRFDGGDIGELDLARA 244 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 AE++S +D T+ ++ + H+++ LLG +F + +P + + I G+P Sbjct: 245 RAELESARTDRLTVTRARALAEHSLAILLGKAPADFSFAVAP----LEP-VTVEIPPGLP 299 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS--- 325 + L+ RPD+ E+ +A + A+IG+AK+ +PSLSL + ++ G WS Sbjct: 300 STLLERRPDVAAAERAMAAANARIGVAKAAFFPSLSLTATGGF--ESGSLGDLFRWSSRT 357 Query: 326 --FGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 GP L LP+FD G+ ++ A + E +++ VL A ++VE+ L+++ Sbjct: 358 FVLGPIAGAALTLPLFDGGRRAGHLANARAVYDESVANYRQQVLGAFRDVEDNLSALR-- 415 Query: 380 KKIVTKLQHAVELHKKSMS-----LSMINYRQGRYSLLDILDIERATAKVE---VDLSIA 431 + K Q A + + S LS YR+G S LD++D ER T ++ V L+ A Sbjct: 416 ---ILKTQRATQDAAVAASSRASILSRTQYREGAVSYLDVIDAERDTLQLRRGAVQLAGA 472 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 + A + V+L A+G G+ Sbjct: 473 Q---AVATVNLIRALGGGWG 489 >gi|226953159|ref|ZP_03823623.1| outer membrane protein [Acinetobacter sp. ATCC 27244] gi|226836089|gb|EEH68472.1| outer membrane protein [Acinetobacter sp. ATCC 27244] Length = 441 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/430 (24%), Positives = 209/430 (48%), Gaps = 17/430 (3%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 +P FS N I K + F+D L ++++I+L+ N + AT I A++ Sbjct: 12 IPQSFSHANGGTSIAEQGYK--DFFSDPRLLQVIEISLENNRDLRTATLNIQRAQQQYQI 69 Query: 92 VRADLFP--SSYASISHRFIPNLKTN---STGQLD---SDWKIDLFGQRRHI-ESSLANL 142 R D P + S + P++ N ST Q+ + +++D +G+ + + +++L Sbjct: 70 TRNDQRPMIGATGSAVRQVNPSINPNNPYSTFQVGLGVTAYELDFWGRVKSLKDTALNQY 129 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + + D +++++S++ ++++ KE +S+A Q L + EL+ +F G S+ Sbjct: 130 LATQSARDATQISLVSQITQAWLNYAFAKENLSLAEQTLKAQLDSYELNKKRFNVGIDSE 189 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + L + + +++ +D+ + ++ L G + L Q SN Q + Sbjct: 190 VPLRQAQISVETARNDVANYRTQVLQAQNLLNLLAGQTIPQDLLPHQAISNITQEKTFA- 248 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPG 319 G+ +DL+ NRPD++ E +L + A IG AK+ ++P++SL GS ++ F Sbjct: 249 --TGLSSDLLNNRPDLKAAEYQLRAAGANIGAAKARMFPTISLTGSAGYASTELNDLFKS 306 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 WS GP + LPIFD G K+N++ +E+ + +++++ A +EV +AL + Sbjct: 307 GGFSWSIGPSIDLPIFDWGTRKANVKISETDQKIALSEYEKSIQAAFREVNDALAAHAHI 366 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + + + V + LS +R G S L +LD +R+ + L I ++ + Sbjct: 367 DERLDAQRRLVSATDTTYKLSSARFRAGIDSYLTVLDAQRSAYAAQQGLLILEQTKLNNQ 426 Query: 440 VDLYIAIGSG 449 ++LY A+G G Sbjct: 427 IELYKALGGG 436 >gi|332187524|ref|ZP_08389261.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332012453|gb|EGI54521.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 496 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/486 (23%), Positives = 217/486 (44%), Gaps = 58/486 (11%) Query: 17 GCTVGPEYTKP--HMPLLPTQFSI--GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC P+Y +P +P Q I + + ++ + W F D L + + + L+ N Sbjct: 18 GCNFAPKYIRPVGAVPATLPQDGIYPPAASDAPDVTRIGWQSFFTDDRLRRTIALGLENN 77 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT------------------ 114 + A + A+ RADL PS+ S S + N++ Sbjct: 78 RDLRIAAANVLQARAQYRVQRADLVPSTSLSGSGTYTNNIQGAAGALGGAAGGGTGAGAG 137 Query: 115 -------------NSTGQLD--------SDWKIDLFGQRRHIESSLANLDSAYAQVDI-- 151 +S+ L+ S +++DLFG+ R++ A L+ +A + Sbjct: 138 AGTGGTGLGTGVGSSSRNLEFYSANVGFSAFELDLFGRVRNLNR--AALEQYFATEEAQR 195 Query: 152 -AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 ++++I+++ +++ ++++ I+ + L +++++EL+ +F G S+L + E Sbjct: 196 ATRISLIAEIATAWLTYASDQDQLRISQESLKSFEQSLELTRAQFRIGVASELEARQAET 255 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + +DI L+ + + + L+G P T+ L P +P G+ + Sbjct: 256 TYQGARNDIAVLKTRVAQDKNALDLLVGTPVQTDLLPQGLADGGAALP--LLPT--GLSS 311 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 D++ RPD+ E +L A IG A++ ++P +SL G+I+ F G + ++ Sbjct: 312 DILLRRPDVLQAEHQLIAQNANIGAARAAMFPRVSLTATLGTISTALSGLFAGGSFTYTG 371 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTK 385 P + LP+FD G+++ N+ A + Q T+++TV A +EV +AL D++I + Sbjct: 372 APSVSLPLFDGGRLRGNLDAARAQQQAAVSTYEKTVQTAFREVADALAQRGTIDEQIAAQ 431 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 VE ++ +S YR G S L LD +R + L + + V+LY A Sbjct: 432 TAR-VEAANVALKISDARYRTGVTSFLTTLDSQRTAYSAQQLLVTTRLNRESNMVELYRA 490 Query: 446 IGSGYN 451 +G G N Sbjct: 491 LGGGLN 496 >gi|167590052|ref|ZP_02382440.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 476 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 110/462 (23%), Positives = 206/462 (44%), Gaps = 56/462 (12%) Query: 26 KPHMPLLPTQFSIGNSKNLINIDT------LKWWESFNDTSLNKLVKIALQQNLTILQAT 79 KP +P+ P ++ ++ DT L W F D L +L+++AL N + A Sbjct: 2 KPELPV-PAAYTTAGTQADTQADTRANAADLGWRTMFGDPRLQRLIELALDNNRDLRIAV 60 Query: 80 ERINAAKENILSVRA---------------------DLFPSSYASISHRFIPNLKTNSTG 118 + AA+ RA DL P SI ++ N+ N+ Sbjct: 61 LNVQAAEAQYGIQRAARLPSIDATGSFTRQRTPANADLNPPVPESIQQQYGVNVGINA-- 118 Query: 119 QLDSDWKIDLFGQRRHIESSLANLDSAYAQV-------DIAKLNVISKLIPSYIDARHFK 171 ++IDLFG+ + + D+A+A+ A++++I + +Y R + Sbjct: 119 -----FEIDLFGRVKSLS------DAAFARYLATDQGRRAAQISLIGAVADAYFAERLAQ 167 Query: 172 ERISIAHQILDLYKKNIELSH-LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ +++ + L +++++EL+ LK + A S + + + E ++ S +D+ ++ Sbjct: 168 EQRALSERTLGDWQQSLELARKLKEARQA-SGVDIAQAEGQVASAAADLEARSRAVSQAR 226 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G TE + Q + + G+P+DL+ RPDI+ E+ L + A Sbjct: 227 NALRLLVG---TELPKDLPAPLPLEQQPVVTRLPAGLPSDLLVRRPDIQQAEQNLVAANA 283 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P LSL G I+ + F G + W+F P++ LPIF G+++S +R + Sbjct: 284 DIGAARAAFFPRLSLTTTLGFISPGFGSLFNGDHRAWAFSPQVTLPIFQGGRLRSELRLS 343 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E ++ + A +EV + L + + V ++ +LS + YR G Sbjct: 344 EVRKSSAVAEYERAIQVAFREVADGLAGSETFDRQIEAQTRVVASAERRTNLSNLRYRAG 403 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R L +R + V LY A+G G Sbjct: 404 IEGRLELLDSQRQLYAARQTLLDLRRDEFGNAVALYKALGGG 445 >gi|120610787|ref|YP_970465.1| RND efflux system outer membrane lipoprotein [Acidovorax citrulli AAC00-1] gi|120589251|gb|ABM32691.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax citrulli AAC00-1] Length = 520 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 204/458 (44%), Gaps = 58/458 (12%) Query: 18 CT-VGPEYTKPHMPLL-----PTQFSIGNSKNLINID-TLKWWESF-NDTSLNKLVKIAL 69 CT + P + KP +P+ P+ + I +D L+ WESF + L ++ +L Sbjct: 30 CTNLAPPFWKPALPVPEVVGSPSTRGTDSVTFGIAVDIGLRPWESFITEPRLRGVIAQSL 89 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLDS---- 122 + N + A I A+ RADLFP+ + A R +L S Sbjct: 90 EANRDLRVAVLAIERARAQYGVSRADLFPTVGATGAGTRSRTADDLTAAGRASTASQYSA 149 Query: 123 -----DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 ++ID FG+ R++ +++L +L++++ + +++ R+ + Sbjct: 150 QIGFASYEIDFFGRVRNLNDAALQEFLRVGENARSVRLSLVADVAGAWLALDADARRLLL 209 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L +++ L+ + QGATS L+L + +A + + +D+ + + + + L Sbjct: 210 ARETLRTRSQSLALARRSYEQGATSGLTLTQTQATVDAARADLASAATQLARDRNALHLL 269 Query: 237 LGYP---------ATEFLHYMQKQSNNFQPN----------------------LYIPINI 265 G P A E L ++ P L +P Sbjct: 270 AGRPVDDALLPPAAVEALAPPPAETGASAPGGDRAGSPDPARSQRPAVSVAQALAVPAG- 328 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----N 321 +P+ + +RPD++ E+ L + A IG A++ +PS++L S+ T N G N Sbjct: 329 SLPSSTLLHRPDVQAAERSLRGAFANIGAARAAFFPSITLTTSVG-TASNELSGLFGAGN 387 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 WSF P++ LPIFD G+ ++N+R AE + + +++TV A +E +AL ++ Sbjct: 388 GTWSFAPQIRLPIFDGGRNRANLRVAEVARETALAQYEKTVQTAFREAADALAERATLQE 447 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + Q V+ ++++ L++ +R G S L +LD +R Sbjct: 448 RLQAQQSLVDSSQRALDLTLARWRLGADSYLAVLDAQR 485 >gi|222112534|ref|YP_002554798.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221731978|gb|ACM34798.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 484 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/438 (23%), Positives = 196/438 (44%), Gaps = 27/438 (6%) Query: 28 HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE 87 H PL P Q S+ D WW+ +D L L+ A + T+ +A R+ A+ Sbjct: 39 HAPL-PHQGSVA--------DLAGWWQRHSDPLLGALIVDAQALSPTVAEAGARLAQARA 89 Query: 88 NILSVRADLFPS--SYASISHRF---IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN 141 + RA L PS + AS S F + + T + L + W+IDLFG+ + +++ Sbjct: 90 QQTAARAALLPSLDAQASASRGFNEQVRGVATTAQAGLQAGWEIDLFGRNAAVADAARER 149 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 L A AQ A+++V ++ Y + H ++ +A D + + ++ A Sbjct: 150 LAGAQAQWHEARVSVAAETALQYSNWHHCARQLQVAQ--ADARSRGETARLTRESERAGF 207 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 A +S + ++ + V + TL+ + + + P L+ Sbjct: 208 TAPATAALATASQADSAVRAEQQRLQCEV-IVKTLVALTGRD--EPLLRSQLAAAPPLHP 264 Query: 262 PINI----GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDN 315 P + G+PA + RPD+ E+++A + A++G A++ YP L+L+G+I L Sbjct: 265 PEQLFSIDGLPAQTLAQRPDVYAAEREVAAASAEVGDAQAQRYPRLTLSGTIGRGLVRTA 324 Query: 316 SFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + WS GP + LP+FD G+ + + A + ++ V A+ EVE AL Sbjct: 325 GVQATSNTWSIGPLAVTLPLFDGGRRAAQVDAARARYDSAAQAYRAQVRQAVSEVEQALA 384 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 ++ + T + A E +++S + + +R G SL+++ D R + + +++ Sbjct: 385 RLDSTARRSTDARRAAEDYRRSFTATQERWRAGLASLVELEDARRTALASDTAVVALEQE 444 Query: 435 LAKSYVDLYIAIGSGYNP 452 ++V LY A G G+ P Sbjct: 445 RMAAWVALYRAAGGGWTP 462 >gi|317405130|gb|EFV85473.1| multidrug efflux system outer membrane protein [Achromobacter xylosoxidans C54] Length = 495 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/481 (26%), Positives = 215/481 (44%), Gaps = 62/481 (12%) Query: 17 GCTVGPEYTKPHMPL--------LPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVK 66 GC VGP Y +P LP + + + L+ WW+ F D LN+L + Sbjct: 21 GCAVGPTYERPAAATPAAYKEAALPAAEAGTWKPAQPSEEALRGEWWKVFGDEGLNQLQE 80 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--------- 117 A + N + A R+ A+ RA FPS A+ F PN + S Sbjct: 81 EAHKANQNLQAAAARLTQARALQREARAGFFPSLDAA----FGPNRQRPSAVSQGLPDGT 136 Query: 118 ---------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI----SKLIPSY 164 Q ++ DLFG + S+ + Q + +V+ + + +Y Sbjct: 137 STRPVTTWRAQGTVSYEADLFG---RVASTADAATADAQQSEALYRSVLLALQADVATTY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R ++ Q + L + ++L ++ G S+L L + +AE+ S +S+ +++ Sbjct: 194 FLVREQDAEAALYRQTVQLRTETLQLIQRRYDAGDISELDLARAKAELASAQSEALGIDR 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H ++ LLG +EF + + + I G+P+ L+ RPDI E+ Sbjct: 254 RRAAGEHALAVLLGRAPSEFAMPPKPIEK-----VALSIPAGLPSTLLERRPDIAAAERA 308 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIF 335 +A + A++G AKS +P L + G A +++S G WS G L +PIF Sbjct: 309 MAAANARVGAAKSAFFPRLDITG--AFGYESSELGNLFQWSSRTFLLGPLVGAALSMPIF 366 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ + RA + +E +++TVLNA +EVE+ L ++ AVE + Sbjct: 367 DGGRRQAGLDRARAVYEEDVAVYRQTVLNAFREVEDNLANLRILSDQTRAQDAAVEASAR 426 Query: 396 SMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY-N 451 + LS YR+G S LD+++ +R+ +V V LS + A+S VDL AIG G+ N Sbjct: 427 AAKLSHTQYREGSISYLDVIEADRSVLLQQRVAVQLSGEQ---ARSAVDLIRAIGGGWGN 483 Query: 452 P 452 P Sbjct: 484 P 484 >gi|296282877|ref|ZP_06860875.1| multidrug efflux system, outer membrane subunit [Citromicrobium bathyomarinum JL354] Length = 453 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 109/405 (26%), Positives = 189/405 (46%), Gaps = 13/405 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIP 110 WW+ F D+ L+ LV+ L NL I A +R+ AA + + RAD P A+ + I Sbjct: 48 WWQGFGDSVLDDLVEQGLTANLDIAIARDRLRAADALLQAERADRLPRLDGAADAAIGIG 107 Query: 111 NLKTNST-----GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 ++S G D D L Q R + A + Y D +L V + + YI Sbjct: 108 TSDSDSASIGLLGTFDPDISGRLSAQIRAAAADYAQAE--YILADQRRL-VAAAIAAQYI 164 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R ++ + Q +L ++ + + L+F G + L + + A++ + +E + Sbjct: 165 EYRRTGAQLELLAQSTELQERTLRIVTLRFEAGLAANLDVRRAAADLAQTRARRGLIEIA 224 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + ++ LLG F P+ G PADL+R R D+ E L Sbjct: 225 RAGAANRLAILLGQSPGLFTPPPAPGEQTI-PDYAGGPPAGTPADLLRRRADVLAAEAAL 283 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSN 343 + A +G ++DL PSL++ S+ L D S G + S G L LP+FD G+ ++ Sbjct: 284 LRASAIVGAEQADLRPSLTIPASVTL-GDGSIGGILDEFIASIGAALDLPLFDGGRRRAE 342 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A + A ++ ++ T L A+ EVENAL +++ + + + L A+E + ++ S Sbjct: 343 VDAARAEADARFGEYRLTFLEALGEVENALVALDANGQRIDALSEAIEQSEAALEQSDAL 402 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 YR+G +L D+LD +R L ++ LA S++ + AIG+ Sbjct: 403 YREGLATLFDVLDAQRQLIASRQSLIDSQAALATSFISFHAAIGA 447 >gi|293603190|ref|ZP_06685623.1| NodT family outer membrane efflux lipoprotein [Achromobacter piechaudii ATCC 43553] gi|292818421|gb|EFF77469.1| NodT family outer membrane efflux lipoprotein [Achromobacter piechaudii ATCC 43553] Length = 484 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 121/487 (24%), Positives = 223/487 (45%), Gaps = 61/487 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI----------NIDTLKWWES 55 A+ LL C VGP+Y +P + + + G + + + D KWW+ Sbjct: 16 AVTLALCALLGACAVGPDYQRPTLDV-GASYKEGQGQEQVEGWKPAQPRDDADRGKWWQV 74 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---------- 105 + D +LN LV+ N TI QA A + + RA +P+ AS Sbjct: 75 YGDDTLNGLVERLNTSNQTIAQAEANYRQALGLVRAARAGFYPTVGASAGMSRAGVGTGS 134 Query: 106 ------HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + N + + TG + W++D++G+ RR ESS A+ ++ A + +L+ + Sbjct: 135 SSSTGNGSNVSN-QYSVTGSVS--WELDVWGRVRRSTESSEASAAASLADLAATRLSAQA 191 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L+ +Y+ R E+ + + Y+K+++L+ ++ G + + +++S + Sbjct: 192 ALVQTYLQLRVLDEQKRLLEATVAAYEKSLQLTQNRYEVGVAGQADVAVARTQVESTRAQ 251 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRN 274 L+ H I+ L+G ++F + P ++ +P I +G+P++L+ Sbjct: 252 SIDLDWQRGQYEHAIAVLMGQAPSQF---------SLPPAVFALQLPQIPVGLPSELLER 302 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-------NGSIA--LTHDNSFPGYNTHWS 325 RPDI E++ A + A+IG+A++ +PSL L NG A LT F WS Sbjct: 303 RPDIAAAERRAAAANAQIGVAEAAWFPSLILSADGGFRNGQFAELLTAPARF------WS 356 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L L IFD G + + +A +S Q +++ L ++EVE+ L + + T Sbjct: 357 LGPALALTIFDGGARAAQVEQARASYDAQAAAYRQAALVGLREVEDYLIQLRVMENEQTV 416 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYI 444 + A+E ++S+ L Y+ G L + ++ E + LS+ +L S V+L + Sbjct: 417 QRRALESARESLRLIQNQYKAGLVDYLSVAVVDATALNSERNALSLLGTRLVAS-VNLIV 475 Query: 445 AIGSGYN 451 A+G G+ Sbjct: 476 ALGGGWE 482 >gi|37519362|gb|AAQ92182.1| outer membrane protein [Pseudomonas fluorescens] Length = 486 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 106/460 (23%), Positives = 212/460 (46%), Gaps = 28/460 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIG-----NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L+GC++ P+Y +P P+ Q+ G W + F+D +L +L+++A Sbjct: 14 VLSGCSLIPDYQQPEAPV-AAQYPQGPAYSPTQAPAQAAAEQGWKQFFHDPALQQLIQVA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD----- 121 L+ N + A I+A RADLFP S+ + S + +P + TGQ Sbjct: 73 LENNRDLRVAALNIDAFAAQYRIQRADLFPAVSANGTGSRQRVP-ADASQTGQAGITSSY 131 Query: 122 ------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R + E +L + ++++++ + +Y+ + KE Sbjct: 132 SATVGISAYELDLFGRVRSLSEEALQKYFATEEGRRSTQISLVASVANAYLTWQADKELR 191 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + L ++++ +L+ G S L L + +++ + + + + +++ Sbjct: 192 KLTQDTLGAFEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLARYTRQVAQDENSLV 251 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG L +++ +L + G+P+DL++ RPDI E L + A IG Sbjct: 252 LLLGTGIPANL----REAKPLSDDLLSDVPPGLPSDLLQRRPDILQAEYNLKAANANIGA 307 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL G+++ F G + W F P++ LPIF+ G +++++ ++ Sbjct: 308 ARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASLDYSKIQK 367 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++++ A +EV + L + + + + V ++ L+ YR G S Sbjct: 368 DIGVANYEKSIQTAFQEVADGLAARQTYTEQLQAQRDFVTANQDYYRLAERRYRIGVDSN 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +R + L + S V+LY A+G G+N Sbjct: 428 LTFLDAQRQLFSAQQALITDRLAQLTSAVNLYKALGGGWN 467 >gi|88811167|ref|ZP_01126423.1| outer membrane channel protein [Nitrococcus mobilis Nb-231] gi|88791706|gb|EAR22817.1| outer membrane channel protein [Nitrococcus mobilis Nb-231] Length = 465 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 107/457 (23%), Positives = 205/457 (44%), Gaps = 27/457 (5%) Query: 14 LLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 LL+ C+ GPEYT P P T + N WW F D LN L++ A+ Q Sbjct: 5 LLSACSSFFGPEYTTPQAPSKSTWSANPTGIAAANAIQPDWWRGFQDPYLNSLIRQAVAQ 64 Query: 72 NLTILQATERINAAKENILSVRADLFPS----SYASISHRFI---------PNLKTNSTG 118 + + RI A+ + +A P+ + AS++ + P + Sbjct: 65 GIDLRILAGRIAEARAAVGQAQATRLPTVNATTQASVTRSRVEILPGEFADPTTTHQYSA 124 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +W+ID++G+ R+ +E+ A + ++ A L + S + Y R E+ Sbjct: 125 RGALNWEIDIWGKLRKGVEAQQAAVRASQADWRAGYLTLASDVASIYFLIRQLDEQRGQQ 184 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L ++ + + ++ G ++ ++++ AE + + E+ ++ + ++TLL Sbjct: 185 QKFLVNNQQILAIYERQYRDGLVARTAVLQQRAEGSDMRQLLLEFERQRQVAENQLATLL 244 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G PA EF + Q + +P + G+PAD++ RPDI E ++ + IG A+ Sbjct: 245 GTPAGEFKVPVVGQLERVR----VPHVPAGLPADMLSRRPDIIAAEYRVLQAYDLIGQAR 300 Query: 297 SDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 PS SL G+++ + G+ + P + +PIFD +K+N+ E+ A+ Sbjct: 301 LARLPSFSLTANGGAVSSVLSSLLKGFT--FGLAPAINVPIFD-ASLKANVNVNEARAKI 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ TV+ A +EVENAL S+ K+ + L+ ++ + + G S L Sbjct: 358 AAQQYRRTVITAYEEVENALVSLAFRKRQMQALKDQLKDLRTVNEQVRAQLKIGLVSQLQ 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + +R E+ +Q+ + LY A+G G+ Sbjct: 418 VFESQRRLLSAELLALTLHQQILSDTITLYKALGGGW 454 >gi|116622509|ref|YP_824665.1| RND efflux system outer membrane lipoprotein [Candidatus Solibacter usitatus Ellin6076] gi|116225671|gb|ABJ84380.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Solibacter usitatus Ellin6076] Length = 472 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 105/460 (22%), Positives = 209/460 (45%), Gaps = 35/460 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNL 73 GC+VGP+Y +P + P K DT+ WW F D LN L + N Sbjct: 14 GCSVGPKYQRPMIQAPPAYKESQGWKTAQPADTVLRGNWWTLFGDAELNALEQQIDLSNQ 73 Query: 74 TILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQL---- 120 + A + A+ I ++ +P+ + S ++ + +N+ G Sbjct: 74 NLKAAEAQFQQARALIRFTQSQKYPTVTVGAGVSGNRNSATYAYASPKTSNTYGNFVLPF 133 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D +++D +G+ R+ IE++ N + A ++ +L+ ++L Y + R + Sbjct: 134 DVSYEVDAWGRVRQSIEAARTNAQATDADLETLRLSFHAELAFDYFEMRSADAEQKLLDD 193 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDIPTLEKSFRMNVHNISTL 236 + Y+K ++L+ +F G + + + + ++ K++ +D+ F H I+ L Sbjct: 194 TVVAYRKALDLTENRFAGGVAAGAEVAQAQTQLESTKTLATDVAIRRAQFE---HAIAVL 250 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + L K P I +G+P+ L+ RPDI E+++A++ A++GIA+ Sbjct: 251 AGKNPSA-LTIAPKPLAAEPP----AIPVGVPSQLLERRPDIAANERRVAEANAEVGIAR 305 Query: 297 SDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + +P L L + L + ++P + WS GP IFD G+ ++ + AE + Sbjct: 306 TAFFPQLLLGATAGLEGQSITDWINWP--SRFWSIGPSAIQTIFDGGRRRATQKAAEFNY 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 T+++T L+A ++VE+ L ++ ++ + AV ++S+ LS Y G + Sbjct: 364 DATVATYRQTALDAFQQVEDNLIALRVLEQETQSQRAAVIAAERSVELSTNRYTGGLVTY 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+++ + A E + R+ + V L A+G G++ Sbjct: 424 LEVVTAQSAALNNERAVVDILRRRMDASVLLIKALGGGWD 463 >gi|78063776|ref|YP_373684.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77971661|gb|ABB13040.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 484 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 107/422 (25%), Positives = 196/422 (46%), Gaps = 23/422 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW+ F+D L+ LV+ AL QN + A R+ A+ + A P + A + Sbjct: 64 RWWQLFDDPVLDALVREALAQNRDLAVAAARVARARAVLDEAGAARLPDTTAGFGVDYGK 123 Query: 108 FIPNLKTNSTGQLDS------------DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 P+ S D+ W++DL+G+ H ++++ A+ ++ A D ++ Sbjct: 124 HAPDQIVASAKGTDARTRWGFAPSFAVSWEVDLWGRVGHLVDAARADSEAVQAASDAMRV 183 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V ++ +Y A + ERI +A + + + + L+ + G S L + + A Sbjct: 184 AVAAETTAAYAQACAYGERIDVAERSVAIADRLAALTARQRAHGLVSDLEVARSRAFADD 243 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++P L + R + ++ L G+ + + P L P +G A L+R Sbjct: 244 TRAELPALAGARRAALVELAVLTGHAPGAIPDAAAR--CHATPALARPFPVGDGAALLRR 301 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG--YNTHWSFGPK 329 RPD+R E++LA S A+IG+A ++LYPS+ L GS+ + T D S G Y W GP Sbjct: 302 RPDLRESERRLAASNARIGVATAELYPSIVLGGSVNWLSTTGDPSSLGDKYAIAWGVGPL 361 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + + ++ + +A + ++ VL A+KE E AL + + L A Sbjct: 362 ITWRFPNLAASRAQLAQARADDAAARASFDAQVLRALKETEQALARYGAEWRHKAALDTA 421 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 H ++ L+ +NY G L +LD +R+ V+ L+ + +Q+A V ++ A+G G Sbjct: 422 RAEHARAYRLAELNYDAGALDFLGVLDAQRSLVAVDAALAASTQQVALDQVAVFKALGGG 481 Query: 450 YN 451 + Sbjct: 482 WQ 483 >gi|300311796|ref|YP_003775888.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] gi|300074581|gb|ADJ63980.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] Length = 510 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 219/468 (46%), Gaps = 28/468 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKLV 65 + LL GC VGP+Y +P + L P + L D WWE++ D LN L+ Sbjct: 39 VLAALLGGCAVGPDYARPALDL-PQAYKETGPWKLAAPRQIDDHQPWWEAYGDPVLNALM 97 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTG 118 A N TI QA + A+ RA L+P+ S A + + L + + Sbjct: 98 DQANAANQTIQQAAAQYRQAQATAEVARASLWPTIGAQAGASRAQTNTNGVQRLGNSYSV 157 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L++ W+ DL+G+ RR E+ AN ++ A + A+L++ + L Y+ R + + Sbjct: 158 GLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLAQDYLQLRVTDLQKDLY 217 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + Y ++++LS ++ G + + + E ++++ ++ + L+ + H I+ L+ Sbjct: 218 RRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLIDLDDTRNQLEHAIAMLI 277 Query: 238 GYPATEF---------LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 G +F +N + +P I +G+P++L+ RPDI E+ A Sbjct: 278 GKAPAQFSLPALPPAAASDSAIDANAARLQGSLPQIPVGLPSELLERRPDIANAERLAAA 337 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG+A++ +P+L+L+ S L N F + WS G L +FD G + Sbjct: 338 ANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLGSALAESLFDGGARSARN 397 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A ++ +++TVL ++EVE+ L+++ + T AV+ + + L+M Y Sbjct: 398 DAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQAVQSAQLAERLAMRQY 457 Query: 405 RQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 G + L ++ + A+ + + +++ RQL S V L A G G+ Sbjct: 458 EAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVAS-VALIKATGGGWQ 504 >gi|121594700|ref|YP_986596.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120606780|gb|ABM42520.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 492 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 117/473 (24%), Positives = 223/473 (47%), Gaps = 39/473 (8%) Query: 4 LRAIFSLFIVLLAGCTVG-----PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 LRA V +AGC G P + +S ++ D +W + D Sbjct: 28 LRAGLLGICVTIAGCMAGVRTDVPSPALLPAAWPAPPVAFDDSSVGVD-DRAEWGMFYRD 86 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTN 115 +L LV+ AL+ N + A R++ A+ + AD +P+ SH R +L + Sbjct: 87 PTLQGLVRQALENNRDLRLAMLRVDEARAALGLQSADRWPTLAVGSSHTRARVPGDLNVS 146 Query: 116 S---------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYI 165 G S+W++DL+G+ R +E++ A A+ A+ +++++ +Y+ Sbjct: 147 GRAVTTGEHRVGLAISNWELDLWGRVRSLEAAAQQAYFASAEGSRAAQAALVNQVARNYL 206 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R +ERI++ + ++++ + + GA S+L+L ++E+ + ES L + Sbjct: 207 AWRETQERIALTEDTIATRRESLRIFGRRHAAGAISRLALTQVESLLYQAESIGTQLAQQ 266 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 + H ++ L+G P + Q + +P + G+P+DL+ RPDI E Sbjct: 267 QALQAHALAQLVGVP------WDALALAPPQAAVALPTVPAGLPSDLLLRRPDIAAAEHT 320 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A++ A++ +P ++L G+ + D F + W+F P + +P+FD G+++ Sbjct: 321 LHAANARVQAARAAFFPRIALTTSAGTASAHLDGLFDSGSRAWTFAPSISVPLFDGGRLQ 380 Query: 342 SNIRRAESSAQEQYIT---WQETVLNAIKEVENALTSINEDKKIVTKLQHAVE--LHKKS 396 SN+ + SA Q I +++TV A +EV +AL + + +T LQ A LH+++ Sbjct: 381 SNL---DLSAARQNIAVADYEKTVQTAFREVSDALATRATAARQIT-LQQAQRDALHERA 436 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + Y G ++LD +R E L A+ L +++ +Y A+G G Sbjct: 437 -RLAQLRYDHGATPYFEVLDAQRDLLAAEQQLVQARYALQAAHIAVYAALGGG 488 >gi|1399759|gb|AAB41958.1| outer membrane protein OprJ [Pseudomonas aeruginosa] Length = 479 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 110/463 (23%), Positives = 206/463 (44%), Gaps = 20/463 (4%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L I L L C++ P Y +P P+ + + IDTL W D L +L Sbjct: 7 GVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQRQGAAIDTLDWKSFIVDAELRRL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD 121 V +AL ++ Q I AA+ RAD P A+ + R +L + ++ Sbjct: 67 VDMALDNIRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVA 126 Query: 122 S---------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S ++++DLFG+ + + +++L ++ A++ +++++ +Y+ Sbjct: 127 SSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGAL 186 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R+++ Q L + + L + GA + L + + +E E++ R Sbjct: 187 RRLALTRQTLVSREYSFALIDQRRAAGAATALDY---QEALGLVEQARAEQERNLRQKQQ 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+ ++ +S +P L I G P++LI RPDI E +L A Sbjct: 244 AFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNAD 303 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +P +SL GS + F G + SF P L LPIFD G+ ++N+ AE Sbjct: 304 IGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSCSFLPTLTLPIFDGGRNRANLSLAE 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ T+ A +EV +AL + + ++ L+ +++ L+ Y G Sbjct: 364 ARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGV 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L LD +R++ E+ Q + VDL+ A+G G++ Sbjct: 424 DNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWD 466 >gi|288932944|ref|YP_003437003.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] gi|288887673|gb|ADC55991.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] Length = 454 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 112/464 (24%), Positives = 212/464 (45%), Gaps = 29/464 (6%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFND 58 + R F +L AGC ++ P Y +P P+ LP G S ++ W + ND Sbjct: 1 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAH--GESTAVVG----DWQKVVND 54 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NS 116 L K+V +AL N + +A I AA+ RA LFP+ A +SH + + +S Sbjct: 55 ARLKKVVSLALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSS 114 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q D S +++DLFG+ + + + L S + + +L +I+ L +++ Sbjct: 115 ASQADGAVSSFELDLFGKNQSLSRAARETWLASEFTAQNT-RLTMIADLTTAWVTLATDN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A Q +D + + + G S + E+ + + + + + + Sbjct: 174 SNLALAQQTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L G E L + + N + G+ + ++ RPDI+ E L + A Sbjct: 234 AINLLAGETVPESL--LPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANAD 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +PS+SL S + D S +H WSF P + LP+F G + +R A Sbjct: 292 IGAARANFFPSISLTASAGVGSD-SLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++++ +A K+V +AL + + + V + S+ ++M +Y+ G Sbjct: 351 EAEKKGLIATYEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAG 410 Query: 408 RYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R +AK + LS+ + L + + L+ ++G G Sbjct: 411 VGDYLSVLTAQRTLWSAKTTL-LSLQQTDL-NNRITLWQSLGGG 452 >gi|77456402|ref|YP_345907.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77380405|gb|ABA71918.1| outer membrane multidrug efflux protein [Pseudomonas fluorescens Pf0-1] Length = 480 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 119/466 (25%), Positives = 207/466 (44%), Gaps = 25/466 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDT-LKWWESFNDTSL 61 I L ++L A VGP+Y P + + G+ K +++ WW + D L Sbjct: 7 IAGLGMMLSACSMVGPDYHVPEDAAIQRKDFQGDLAVAGKPVVSAPVPADWWRLYQDPRL 66 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRA-------------DLFPSSYASISHRF 108 ++LV+ A+ N + A ++ A+ + A L S A + Sbjct: 67 DQLVQQAMASNTDLRVAAANLSRARAQVDEAEAAGGWSGGVKMGAQRLQESGEAFLLPEK 126 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +P G + + ++ DL+G +R IE++ AN D+ A D A++ +++ ++ +Y Sbjct: 127 VPVANIGDIG-ISASYQFDLWGTLQRGIEAAKANADATQAAADTARITLVADVVRAYTQV 185 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E IA LDL ++ L G + + + + + KS+ +D+P E + + Sbjct: 186 CAANEEQEIAQHSLDLQSQSTSLIQRLRDAGRGDETQVTRSQTQFKSLRADMPRYEAARQ 245 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + +S LL P + + P + + +G A L++ RPDIR E++LA Sbjct: 246 AGLFRLSMLLAKPVDQLPAGTATCAE--LPKIAQLVPVGDGAALLKRRPDIRQAERRLAA 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A IGIA +LYP +S +I DN W FGP L + G ++ IR Sbjct: 304 ATAGIGIATGELYPDISFGATIGTVGILDNLGKPSTNRWGFGPSLSWSVPTNGA-RARIR 362 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE++ Q + VLNAI+E + L+ + + L A + K + + ++ Sbjct: 363 EAEATTQGALAHFDGVVLNAIRETQTGLSQYSALLQRRDALADAEQSAKLAADQTHRFFQ 422 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 GR S L L R V L+ A Q+A S +DL++A+G G+ Sbjct: 423 AGRESFLADLQATRTYTDVTAQLAAANTQVAMSQIDLFLALGGGWE 468 >gi|300817920|ref|ZP_07098134.1| putative outer membrane efflux protein OprM [Escherichia coli MS 107-1] gi|300529617|gb|EFK50679.1| putative outer membrane efflux protein OprM [Escherichia coli MS 107-1] Length = 431 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 210/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + AT ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHI- 135 A+ A +P S + NLK N STG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDAGRYPQLNGEGSGSWSGNLKGNTATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + + ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYTALGGGW 430 >gi|326317486|ref|YP_004235158.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374322|gb|ADX46591.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 486 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 106/476 (22%), Positives = 200/476 (42%), Gaps = 42/476 (8%) Query: 11 FIVLLAGCTVGP--------------EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 F+ LL+ CT+ P +Y + + + L W + F Sbjct: 9 FLALLSACTLAPPLERPAPPVPAVFPDYGGRAGAAAASPPPGTAVRPDVAASDLGWRDMF 68 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLKT 114 D L +L+ AL+ N + A + A + R+ +P AS S T Sbjct: 69 EDPRLQQLIAAALEHNRDLRLAALQAEAVQAQYRIQRSARWPEVALDASASRERGARAGT 128 Query: 115 NSTGQLD---------------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 S S +++DLFG+ R + +++LA ++ A++ ++ Sbjct: 129 GSDPAGGAGAAVSGQAALSVGVSAFELDLFGRVRSLSDAALARYLASEHGHRAARIALVG 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y R +E++ + L +++++EL+ L G S L +V+ E ++ S E+D Sbjct: 189 AVADAYFAQRLAQEQLRLTGHTLADWRQSLELARLLRQAGQNSGLDVVQAEGQVASAEAD 248 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + +++ + + LLG P M ++ L G+P+ L+ RPD Sbjct: 249 LEARQRALDQADNALRLLLGSDPPAGLPDPMPLEARPVAARL----PAGLPSGLLLARPD 304 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLP 333 + E+ L + A +G A++ +P ++L S+ D+ G+ T W F P++ P Sbjct: 305 LLQAEQALVAAHADVGAARAAFFPRIALTASVGRASDSLGGLFDAGWGT-WRFAPQITQP 363 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD+G+++ +R A+ E ++ + A +EV +AL + V V Sbjct: 364 LFDRGRLRGELRLAQVRRSEAVAQYERAIQVAFREVADALAGAATYGRQVDAQARTVASA 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + LS + YR G L++LD R + L +R + V LY A+G G Sbjct: 424 TRRVELSELRYRAGTEGRLELLDARRQQYAAQQALLDLRRAELGNAVALYKALGGG 479 >gi|299136313|ref|ZP_07029497.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298602437|gb|EFI58591.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 506 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 120/474 (25%), Positives = 213/474 (44%), Gaps = 40/474 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLL---------PTQFSIGNSKNLINI-DTL---KWWESFND 58 ++LLAGC VGP+Y P PTQF + + D + KWWE +ND Sbjct: 16 VLLLAGCRVGPKYHAPPAIAQAPPATYKESPTQFPGSDDWKVAQPQDAMLHGKWWEIYND 75 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTN 115 LN L N I Q E A+ I R+ L+P+ S A NL T Sbjct: 76 PELNALEDKLNIDNQNIKQFFENFMEARTLIAQARSQLYPTVGTSPAYTRSGTSANLTTA 135 Query: 116 STGQ-------------LDSDWKIDLFGQRRHI--ESSLANLDSAYAQVDIAKLNVISKL 160 +T D W DL+G+ R+ E A SA A ++ +L + L Sbjct: 136 TTAGAGVNHTSTLASLPFDVSWAPDLWGKVRNTISEQQYAAQLSA-ADLENERLTEQATL 194 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 ++ + R + + ++ KK+++L+ ++ G ++S+V+ +++ ++ Sbjct: 195 AITFFEIRGQDALQGVLDRTVEADKKSLDLTQSQYDTGIGDRISVVEARNTLQNAQAAAT 254 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + H I+ L+G + F + ++ + P I IG+P L+ RPDI Sbjct: 255 NVGLLRAQYEHAIAVLIGTNPSSF--SIPVKALDAAPPA---IPIGVPTQLLERRPDIAA 309 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ +A + A+IGIA + YP+L+L+ S L + F + WS GP + I+D Sbjct: 310 AERNMASANAQIGIAYAAYYPTLTLSASGGLESSAWSHLFDWSSRFWSVGPAVSETIYDG 369 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++ + + S+ ++++TVL A ++VE++L+S + + Q A + ++S+ Sbjct: 370 GLRRATVNQFISTYNADVASYRQTVLTAFQQVEDSLSSTRILSHQIQQQQDAEKSAQESL 429 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L M Y G +D++ + + L+ Q+ S V L A+G G++ Sbjct: 430 DLEMGRYTTGIDPYIDVVTAQTTLLSDQQTLATLHTQVMTSSVQLIEALGGGWD 483 >gi|307727583|ref|YP_003910796.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307588108|gb|ADN61505.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 496 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 108/481 (22%), Positives = 214/481 (44%), Gaps = 47/481 (9%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWW 53 +R +L + +LA P MP P+ +G+ + + T +WW Sbjct: 1 MRFATALAVTMLASACA----QFPDMPQKPSPKDVGSYETTHSFSTAAQAQSTWPIEQWW 56 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SI 104 +ND LN L+ AL+ T+ A R++ A+ + A L P A S Sbjct: 57 LRYNDPQLNALIAEALKGEPTLASAQARLHNAEASAQQAGATLLPEISAQGSVEKEKQSY 116 Query: 105 SHRFIPNL-----KTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVIS 158 ++ F P L + T +L+ +++D +G+ R + ++ + L++A A V A++ + + Sbjct: 117 NNGFPPALVPHGWRPYGTAELNFSYEVDFWGKNRASLAAATSELEAARADVAQARMVLAA 176 Query: 159 KLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y D AR F ER S A + + ++ +L +F G ++ + + E+ ++S + Sbjct: 177 SIADAYADLARQFAERDS-AEAAVKVRTQSAQLFAERFANGLETQAGVKQAESRLQSARA 235 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 D+ L+++ + + I+ L+G L + + QP + + G+ L+ RPD Sbjct: 236 DLFELDEAIALTRNRIAALMGEGPDRGLGIGRPAVDLTQP---VAMPAGLALGLLGRRPD 292 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPK 329 + + + +I +AK+ YP+++L+ I LT S G + GP Sbjct: 293 VVIARLRAEAASKRIDVAKAGFYPNVNLSAMIGFQSLGLNMLTRAGSAVG-----NVGPA 347 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIF+ G+++ +R A ++ E + ET+ A+ +V + S + Q + Sbjct: 348 ITLPIFNGGRLRGQLRGARATYDEAVANYDETLTKALHDVADVAVSKRALTDRLQATQAS 407 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +S +++ Y+ G LD+L + L+ + + V L A+G G Sbjct: 408 YDAAAQSHRVALERYQGGLSGYLDVLSAADTLVSAQRQLADMRSRTFTLDVSLIRALGGG 467 Query: 450 Y 450 Y Sbjct: 468 Y 468 >gi|298375563|ref|ZP_06985520.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_19] gi|298268063|gb|EFI09719.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_19] Length = 454 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 105/432 (24%), Positives = 203/432 (46%), Gaps = 42/432 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 45 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEAALMTSRLS 95 Query: 96 LFPS----------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ----RRHIESSLAN 141 PS S+ + N+ +++ W++D+FG+ +R +++L+ Sbjct: 96 YLPSLSLDPQGTTSSFDKAKASWTYNVPVSAS------WEVDIFGRLTNAKRQAKAALSQ 149 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + +++++ + G T+ Sbjct: 150 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQYEITTETAVKWQESLRATQALMAAGMTT 206 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + ++ + EA SIE+ + LE++ R + ++ LLG + + + + + P+L I Sbjct: 207 EAAVSQTEATCYSIETSVKDLEQTIRETENTLAVLLGETPQD-IERGRLEEQSLTPDLAI 265 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF--- 317 GIP L+ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 266 ----GIPVQLLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIVN 321 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 322 PGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQAQ 380 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K + H +E + ++ + + G + L++L ++ ++ + + Sbjct: 381 TAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDELQ 440 Query: 438 SYVDLYIAIGSG 449 + V+LY A+G G Sbjct: 441 ATVNLYQALGGG 452 >gi|270157856|ref|ZP_06186513.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|289163880|ref|YP_003454018.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269989881|gb|EEZ96135.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|288857053|emb|CBJ10868.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 479 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 116/480 (24%), Positives = 225/480 (46%), Gaps = 49/480 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQF-------SIGNSKNLINIDTLKWWESFNDTS 60 +F+ LAGC++ P+Y +P MP+ P F I ++ ++ D WWE+F+D Sbjct: 7 LGVFVFALAGCSLAPDYQRPAMPI-PEHFKEPGQWVEIKSTPKIVAPDA--WWEAFHDPV 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-----------SISHRFI 109 LN L K N + A R A + R++ +P+ +I++ Sbjct: 64 LNDLQKQLNVANQDLKLAYARFQEAISIVQIARSNFYPNVQGLLNGNREQTSNTIANPAK 123 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDA 167 +L N +++D +G R+ + +L A A D+A +L++ ++L +Y Sbjct: 124 QSLFNNVLVGGYLTYEVDAWGSIRNAVKASESLAQASAS-DMASVRLSLQAELTNNYFAL 182 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDIPTLEK 224 R E I + + Y+K + L+ ++ GA ++ + E ++ K++ +DI Sbjct: 183 RGSDEAQRILDRTVIAYQKALYLTKQRYQGGAAPIANVDEAETQLENAKTLAADIRLQRA 242 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 H I+ L+G +EF K P + I+ +P+ L+ RPDI E + Sbjct: 243 QLE---HAIAVLVGQIPSEFSIAPGKL-----PKRLLAISPNLPSTLLERRPDIVAAEAR 294 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGP----KLYLPI--- 334 + + A IG+A++ +P +SL G+ + N F + WS GP L P+ Sbjct: 295 VQAANATIGVARAAFFPVISLTGTGGFQSQSFSNLFSKPSLFWSLGPFSLFTLSQPVVQQ 354 Query: 335 --FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVE 391 FD G+++ +++A + E +++TVL A ++VE++L +I++ DK+I T+ + A Sbjct: 355 TLFDGGRLRGLLKQATAQYFETVAQYRQTVLTAFQDVEDSLIAIHQLDKEIHTQ-EAATR 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + + Y+ G + L ++ +E + E+ L + + + V L A+G G++ Sbjct: 414 AAIRAWNQGIYRYKGGLVTFLQVVVVENIALQSELSLVNIRTRRQVASVQLIKALGGGWS 473 >gi|48927357|emb|CAG34266.1| outer membrane protein [Stenotrophomonas maltophilia] Length = 474 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 106/460 (23%), Positives = 218/460 (47%), Gaps = 34/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIAL 69 ++ LAGC T+ P+ T P +P Q+ ++ + ++ + W + F D L +L++ +L Sbjct: 26 VLALAGCSTLAPKNTA-VAPAIPAQWPAEAAQGQVADVAAVGWRDFFIDARLQQLIEQSL 84 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTG 118 Q N + A + A+ RAD P + A ++ +F + Sbjct: 85 QNNRDLRVAVLNVERARGQYRVQRADRVPGVAVTGQMQRQGTDAGVTEQFTAGVGV---- 140 Query: 119 QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++++DLFG+ R++ E++L + A A+L+++++ +++ +R+ IA Sbjct: 141 ---AEFELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYGADAQRLKIA 197 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L Y+ ++ L+ + +G +S L L + +++ +D L + + ++ L Sbjct: 198 DATLKTYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQDRNALALLA 257 Query: 238 GYPATEFLHYMQKQSNNFQPNLYI--PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G L + +P L P G+P+D++ RPDI E +L + A IG A Sbjct: 258 GGQLDPALL-----PDGIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANIGAA 312 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL GSI +++ WSF PK+ LPIF GK+++N+ A + Sbjct: 313 RAAFFPSISLTGSIGSGSSELSSLFDSGTRVWSFLPKITLPIFQGGKLRANLAVANADRD 372 Query: 353 EQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++++ +E +AL +++ D+++ ++ Q +E +++ LS Y G S Sbjct: 373 IALAQYEKSIQVGFRETADALALNVSLDEQVSSQ-QRLLEAAEQANRLSQARYDAGLDSF 431 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +LD R + A+ + + LY +G G++ Sbjct: 432 VTLLDARRTAYNAQQTQLQAQLAQQANRITLYKVLGGGWH 471 >gi|213157391|ref|YP_002319436.1| multidrug efflux protein AdeC [Acinetobacter baumannii AB0057] gi|215483399|ref|YP_002325612.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] gi|301344931|ref|ZP_07225672.1| outer membrane protein [Acinetobacter baumannii AB056] gi|301509919|ref|ZP_07235156.1| outer membrane protein [Acinetobacter baumannii AB058] gi|301595361|ref|ZP_07240369.1| outer membrane protein [Acinetobacter baumannii AB059] gi|213056551|gb|ACJ41453.1| multidrug efflux protein AdeC [Acinetobacter baumannii AB0057] gi|213987545|gb|ACJ57844.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] Length = 465 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 217/459 (47%), Gaps = 25/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I S V L C V + +P + +P FS +S I + K E +D L +++ Sbjct: 12 ILSTLSVTLVAC-VNMQAPQPAITSHIPQNFSQNHSGKTIAEKSYK--EFISDPKLVQVI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPN--LKTNST 117 +I+L N + AT I ++ + P+ + +S PN + T Sbjct: 69 EISLNNNRDLRTATLNIERVQQQYQITKNSQLPTIGVTGNAVRQVSPSINPNNPVSTFQV 128 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D +G+ +++ +++L N + + + ++++IS + +++ + +++ Sbjct: 129 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQISLISNITQVWLNYAFAQANLNL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L L+ +F G S++ L + + +++ +D+ T + + + + L Sbjct: 189 AEQTLKAQVDAYNLNKKRFDVGIDSEVPLKQAQISVETARNDVATYKTQIQQAKNLLDLL 248 Query: 237 LGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G+P + L H +Q + F+ N G+P+DL+ +RPD++ E +L + A IG Sbjct: 249 AGHPVPQNLLPNHAIQNIT--FEKNFAA----GLPSDLLNHRPDLKAAEYELRAAGANIG 302 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ ++P++SL GS + F N WS GP + LPIFD G K+NI+ AE+ Sbjct: 303 AAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAETD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A +EV +AL + + + + V + LSM YR G S Sbjct: 363 QKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATAATYKLSMARYRAGVDS 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + ++LY +G G Sbjct: 423 YFTVLDAQRSAYAAQQGLLALEQMELNNQIELYKVLGGG 461 >gi|187918723|ref|YP_001887754.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187717161|gb|ACD18384.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 484 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 39/450 (8%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTILQAT 79 P+Y +P P + +S + T++ WW+ F D L+ L+ A+ N I Sbjct: 41 PDYKRPDTPAKAS-WSDQKGSPVSAAATIEPDWWKGFQDPYLDTLIAKAIAGNFDIKVLA 99 Query: 80 ERINAAKENILSVRADLFPS-------SYASISHRFIP---NLKTNSTGQLDSDWKIDLF 129 RI+ A I +A P+ + +H+ NL T +W ID++ Sbjct: 100 ARIDVAGTQIGEAKAGALPTMDLGAGADFEKTTHQTFSRQYNLATQV------NWDIDIW 153 Query: 130 GQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G+ + +++ A ++ A L ++S + +Y F ++I + L+ ++ + Sbjct: 154 GKVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQILQFDDQIEQQQKTLETNRQIL 213 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 + + G + +++ +AEI + + + L +S + + + TL+G PA EF Sbjct: 214 AIYDGQRRNGLIPQTQVLRQQAEINRLTNQLLDLRRSRALANNALCTLIGVPAGEF---- 269 Query: 249 QKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 Q + Q + + P+ G+PA L+ RPD+ E ++ ++ +G AK P++SL G Sbjct: 270 QMPKGHLQQRVQLPPVPDGLPAQLLARRPDVVAAEFRVLEAYDLVGQAKLAQLPTISLTG 329 Query: 308 -----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDKG-KIKSNIRRAESSAQEQYITWQE 360 S ALT SF + F P + +P+ D G + + +A+S+ EQ ++ Sbjct: 330 HGGTASFALTDLLKSF-----TYGFMPSINIPLLDPGVRAHVKVTQAQSTVAEQ--QYRV 382 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V+ A +EVENAL ++N K+ +LQ V + R G S L++ + ER Sbjct: 383 AVMGAFEEVENALVNVNSHKEQRVELQQEVSRLQIVADQIQSQLRLGVVSQLEVFETERT 442 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L +Q+ V LY A+G G+ Sbjct: 443 LLEAQQGLLANHQQILSDTVLLYKALGGGW 472 >gi|169795911|ref|YP_001713704.1| outer membrane protein [Acinetobacter baumannii AYE] gi|88758850|emb|CAJ77843.1| AdeC [Acinetobacter baumannii AYE] gi|169148838|emb|CAM86707.1| outer membrane protein [Acinetobacter baumannii AYE] Length = 469 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 217/459 (47%), Gaps = 25/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I S V L C V + +P + +P FS +S I + K E +D L +++ Sbjct: 16 ILSTLSVTLVAC-VNMQAPQPAITSHIPQNFSQNHSGKTIAEKSYK--EFISDPKLVQVI 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPN--LKTNST 117 +I+L N + AT I ++ + P+ + +S PN + T Sbjct: 73 EISLNNNRDLRTATLNIERVQQQYQITKNSQLPTIGVTGNAVRQVSPSINPNNPVSTFQV 132 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D +G+ +++ +++L N + + + ++++IS + +++ + +++ Sbjct: 133 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQISLISNITQVWLNYAFAQANLNL 192 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L L+ +F G S++ L + + +++ +D+ T + + + + L Sbjct: 193 AEQTLKAQVDAYNLNKKRFDVGIDSEVPLKQAQISVETARNDVATYKTQIQQAKNLLDLL 252 Query: 237 LGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G+P + L H +Q + F+ N G+P+DL+ +RPD++ E +L + A IG Sbjct: 253 AGHPVPQNLLPNHAIQNIT--FEKNFAA----GLPSDLLNHRPDLKAAEYELRAAGANIG 306 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ ++P++SL GS + F N WS GP + LPIFD G K+NI+ AE+ Sbjct: 307 AAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAETD 366 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A +EV +AL + + + + V + LSM YR G S Sbjct: 367 QKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATAATYKLSMARYRAGVDS 426 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + ++LY +G G Sbjct: 427 YFTVLDAQRSAYAAQQGLLALEQMELNNQIELYKVLGGG 465 >gi|221197191|ref|ZP_03570238.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221203863|ref|ZP_03576881.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221176029|gb|EEE08458.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221183745|gb|EEE16145.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 476 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 210/458 (45%), Gaps = 32/458 (6%) Query: 16 AGCTVGPE--YTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 AGC V P T P L P + + D WW F D +L++L+ L Sbjct: 15 AGCAVQPAQHATLPDAVGGLAPATWD--TAVPAATSDAATWWAQFRDPTLDRLIATVLDA 72 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP---NLKTNSTGQLDSDW 124 NL + A ER+ A+ S RA L P +++AS + + +P + L W Sbjct: 73 NLDLQAAAERVKQAQALTASKRAALLPELDATAHASDARQNVPPPLGYVRQAGAGLALSW 132 Query: 125 KIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 D+FG +R + ++ A L D +L + + +Y+D R ++ + + + Sbjct: 133 SPDVFGGERLDLLAARAELVGQTHAEDAMRLALAADAASAYVDLRWAQQELKLLQDNAAI 192 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ +EL+ + G +++L + + + ++ ++E+ I ++ I+ G E Sbjct: 193 RQRALELTRKRQAFGLSTELDVTRAKNQLDALEARIAPTRAQIAHQLNLIAVYSGR-TPE 251 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + + P + +P+ + RPD+ ++ A++G+AK++ YP Sbjct: 252 SIDRLVLAESAPIPAPPAGAPVTLPSQALLRRPDVLTAYAQVERRAAQVGVAKAERYPKF 311 Query: 304 SLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 SLN G +A ++ DN F + S PIFD G+I ++I ++ES +E Sbjct: 312 SLNLADGVLAASYLGLPTLTDNLFSAALSATS-------PIFDAGRIAADIAQSESRLRE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++T+L A++EVE+A S+ +L A+ ++++L+ Y+ G LD Sbjct: 365 SELALRQTMLQALREVEDARASLVATDAASQQLGGALAASDRALALATRLYKGGATDFLD 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + A + L+ A R+ A + + LY ++G G++ Sbjct: 425 VLTAQEAYLRDSDSLNQAAREHALAAIALYRSLGGGWS 462 >gi|269139015|ref|YP_003295716.1| copper/silver efflux system outer membrane protein CusC [Edwardsiella tarda EIB202] gi|267984676|gb|ACY84505.1| copper/silver efflux system outer membrane protein CusC [Edwardsiella tarda EIB202] gi|304558950|gb|ADM41614.1| Cation efflux system protein CusC precursor [Edwardsiella tarda FL6-60] Length = 460 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 214/465 (46%), Gaps = 33/465 (7%) Query: 8 FSLFIVL-LAGC-TVGPEYTKPHMPLLPTQFSIGNSKN---LINIDTLKWWESFNDTSLN 62 S+ +VL L GC ++ PEY +P +P+ QFS S + W F D + Sbjct: 7 LSVSVVLALTGCVSLAPEYQRPALPV-GAQFSSSPSATGAATTHYQDRGWRPFFRDAQVR 65 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 +L+ AL+ N + QA + A+ AD +P A+ L+ ++ D Sbjct: 66 QLIDDALRNNRDLRQAVISVRLARAQWALQEADRYPQLDAAAQANSRAPLRGGAS---DR 122 Query: 123 DWKI--------DLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 ++++ DLFG+ + + + L S AQ + L +++ + +Y + Sbjct: 123 EYQLGGALGVELDLFGRLQSMSAREQQNVLASQQAQRAVHIL-LVANVAQAYFTQQLAYA 181 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + IA + L Y+ + L + G + L+L + +I S ++ + E H Sbjct: 182 QRRIAQETLQSYRHSYALIEQQVRAGGANLLALEQARGQIDSTQATLARREGDVAQANHA 241 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I L+G + + + P + + + +P+ ++ RPDI E +L + A I Sbjct: 242 IQRLVGV----YDGAPRDRRGLESPVGPVALPVPLPSTILLQRPDIMEAEHQLRAADADI 297 Query: 293 GIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P++SL+G + + + F WSF PK+ LPIF+ G ++ ++ AE Sbjct: 298 GAARAAFFPTISLSGGLNASGSDLAGLFSAAGGMWSFVPKITLPIFNGGHNRATLQLAEL 357 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 Q+ + ++ + A KEV++AL++ + +T Q ++ + ++ + Y G Sbjct: 358 RQQQSIVNYENKIQAAFKEVDDALSTRRSLAEQLTAQQRYLDALQATVGRARGLYAHGAL 417 Query: 410 SLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L++LD ERA T + +DL A++ + + L+ A+G G+ Sbjct: 418 SYLEVLDAERALFTTQQTLLDLRYAQQ---ANEIALFAALGGGWQ 459 >gi|198277136|ref|ZP_03209667.1| hypothetical protein BACPLE_03344 [Bacteroides plebeius DSM 17135] gi|198269634|gb|EDY93904.1| hypothetical protein BACPLE_03344 [Bacteroides plebeius DSM 17135] Length = 458 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 114/466 (24%), Positives = 214/466 (45%), Gaps = 31/466 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMP----LLPTQFSIGNSKNLINIDTLKWWESF 56 MN + I +LL+ C + Y KP L + ++ ++ ++ NI W + F Sbjct: 4 MNTSKIIACGATLLLSSCGIYTSY-KPQTSVPENLYGEEVTVSDTASIGNI---HWRDFF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKT 114 D L L++ L QN + A+ R+ AK ++LS + PS S + K Sbjct: 60 TDPYLQDLIEKGLAQNTDVQTASLRVEEAKASLLSAKLAFLPSFALSPQGGVNTVEGSKA 119 Query: 115 NSTGQL--DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDAR 168 + T L + W++D+FG+ R+ + SAY Q + K V S LI +Y Sbjct: 120 SHTYTLPVTASWELDIFGKLRNAKR---QAKSAYLQSEDYKQAVYSSLIANIANTYYTLL 176 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E++ I+ Q D +K+ +E + G + ++ ++ A +E+ + LE+ Sbjct: 177 MLDEQLEISRQTADTWKETVESTQALMDAGQADEAAVSQMRATYYEVENSVMDLEEQINQ 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +++S LL E H M + + Q +++G+P ++ NRPD+R E+ L + Sbjct: 237 VENSLSLLLA----ETPHKMARGKLSGQ-QFTSRLSVGVPLQMLSNRPDVRMAERDLEQA 291 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKSN 343 A S YPS++L+GS T NS G T+ S L P+F++G + + Sbjct: 292 FYVTNQANSAFYPSITLSGSAGWT--NSVGGLITNPGKFVTSALASLTQPLFNRGTLIAR 349 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 R A++ +E + +++ +L+A EV AL S K+ ++ V +K+ + + + Sbjct: 350 RRIAKAQQEEALLAFEQKLLDAGTEVNEALVSYQISKRKKDNYENQVAALEKAFTSTSLL 409 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L + ++ + + +S ++LY A+G G Sbjct: 410 MQHGNTTYLEVLTARQTLLNAQLSQTANCFKEIQSLINLYQALGGG 455 >gi|317152832|ref|YP_004120880.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio aespoeensis Aspo-2] gi|316943083|gb|ADU62134.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio aespoeensis Aspo-2] Length = 507 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 101/420 (24%), Positives = 205/420 (48%), Gaps = 25/420 (5%) Query: 10 LFIVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + L AGCT+ P+ P+LP +++ + + T +WW F + L+ LV+ Sbjct: 34 VLTTLTAGCTLFRPDPRDAMEPVLPQGYALYSDEPQA---TARWWREFGNKELDALVEEG 90 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ 119 L NL I A R+ A+ + + AD +PS +++ S + +++S G Sbjct: 91 LNANLDIGAAWGRLRQARASAVQSGADAYPSLDGTADYSHTHSGGSSKRDATSESHSVG- 149 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIA 177 L + +++D +G+ + +S LDS ++ D+ A + V +++ ++ + +++ I Sbjct: 150 LSAGYEVDFWGRVEAVATS-GQLDSEASREDLNTAAMTVAGEIVSRWMRIQSNRQKKHIL 208 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 H+ ++ + +EL L+F + L + + ++ +++++P +E ++ +H ++ LL Sbjct: 209 HEQIEANQTYLELVELRFRNSLATALDVYQQRENVERVKAELPPVESEEQLLLHELALLL 268 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G PA + ++ P L +G+PADL+ +RPDIR L + + A++ Sbjct: 269 GRPAGSI-----RVADAPLPGLASLPGLGLPADLLASRPDIRSAGLDLRSADWAVAAARA 323 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 D P+++L G+ A + +N +W F + PIFD G + + +A E+ Sbjct: 324 DRLPAVTLGGTAAYSGAQLATLFN-NWMFSLAASVVGPIFDGGYRVAEVEKARGVVDERL 382 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ VL A KEVE+AL ++ + Q + + ++S ++ YRQG L +L Sbjct: 383 AVYKGAVLTAFKEVEDALAQEKWQQRYIEARQSQIAAARVNLSEALSRYRQGLDDYLPVL 442 >gi|5764626|gb|AAD51346.1|AF173226_3 SmeC [Stenotrophomonas maltophilia] Length = 471 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 108/471 (22%), Positives = 219/471 (46%), Gaps = 28/471 (5%) Query: 3 ILRAIFSL-FIVLLAGC-TVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFN 57 +LRA+ + +L GC ++ P Y +P P+ P QF +IG ++ + + W + F Sbjct: 5 LLRALAAATMTTVLGGCVSMAPHYQRPEAPV-PAQFGNAAIGAAEPALAMPA--WRDVFL 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI--PNLK 113 + L +++ +ALQ N + A ++ + RA L PS + S++ + N + Sbjct: 62 EPRLQQVIALALQNNRDLRVAVLQVEKERAQYRIQRAALLPSVDASGSVTRSRVSDANSE 121 Query: 114 TNSTGQLDSD--------WKIDLFGQRRHIES-SLAN-LDSAYAQVDIAKLNVISKLIPS 163 T T +SD W++DLFG+ R +++ +L N L SA Q + + ++++++ + Sbjct: 122 TGVTQVTESDAVQVGISSWELDLFGRIRSLKNEALQNWLASAENQRAV-RTSLVAEVATA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 ++ ++ ++ Q LD + ++ + + QG S L L +++ +++ + L+ Sbjct: 181 WLALAADEQSLAFTQQTLDSQHQTLQRTEARHAQGLASGLDLSQVQTSVEAARGALAKLQ 240 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + L+G P L + + +P N+ P+ ++ RPD+ E Sbjct: 241 AQQAQDRDALQLLVGAPLDPALLPTAQALDGSVALAPLPANL--PSSVLLQRPDVLSAEH 298 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +P+L+L G + F WSF P + PIF G + Sbjct: 299 ALQAANADIGAARAAFFPTLALTANYGHSSTALSTLFSAGTRGWSFAPSITAPIFHAGAL 358 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 K+++ ++ +++ + A EV +AL + + + + V ++S +L+ Sbjct: 359 KASLDASKIGKDIGIAQYEKAIQQAFSEVADALATRDHLTAQLDAQRALVADSQRSYTLA 418 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G L LD +R+ + DL ++Q A + V L+ +G G + Sbjct: 419 DARYRTGLDGYLQSLDAQRSLYAAQQDLIALQQQEAGNRVTLFKVLGGGAD 469 >gi|91781482|ref|YP_556688.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91685436|gb|ABE28636.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 509 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 113/459 (24%), Positives = 208/459 (45%), Gaps = 28/459 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLK---WWESFNDTSLNKLVKIAL 69 L CTVGP+Y KP T + + K DT WW + D SL+ L + Sbjct: 33 LTACTVGPDYVKPTATTAATYKELDGTGWKPAQPADTFARGAWWSVYADPSLDALEQQVA 92 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG-------- 118 N + A R AA+ + R+ FP A+ ++ R N+ ST Sbjct: 93 SANQNVQAAEARFRAARATVAQYRSSFFPLVSATGAYSRARSSENVLHKSTAGLTLNDYL 152 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q D+ W+ DL+G+ R +E + A ++ A A L++ ++L Y + R + + Sbjct: 153 VQADASWEPDLWGRVSRSVEGAKAEAQASAADTQAALLSMQAELATDYFELRGLDQERQL 212 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 ++ Y++ +EL+ ++T G + + + + ++K+ ++ L H I+ L Sbjct: 213 LDDTIEAYRQALELTQHRYTGGIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAIAIL 272 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + F + + + L+ RPDI E+++A A+IG+A Sbjct: 273 IGQPPSTFALPVAPLAAVPVVAAAGVPSA-----LLERRPDIAAAERRVAGMNAQIGVAT 327 Query: 297 SDLYPSL--SLNGSIALT-HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P+L S+ G + T + + WS GP L + D G S +A + E Sbjct: 328 AAFFPNLVLSVTGGLEATNYSQWLLAPSRLWSLGPTLAGTLLDFGGRASVKEQARAHYDE 387 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++TVL A +VE+ L ++ ++ + AV ++++++ YR G + LD Sbjct: 388 SVAQYRQTVLTAFGQVEDNLAALRVLEQEASAQDDAVTAAQRALAVVSDRYRNGAITYLD 447 Query: 414 ILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + E D +SIA+R++A S V L A+G G++ Sbjct: 448 VVVAQTTALTNERDAVSIARRRMAAS-VALIKALGGGWD 485 >gi|188534198|ref|YP_001907995.1| Type I secretion outer membrane protein [Erwinia tasmaniensis Et1/99] gi|188029240|emb|CAO97114.1| Type I secretion outer membrane protein [Erwinia tasmaniensis Et1/99] Length = 459 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 200/418 (47%), Gaps = 26/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF 108 WW +FND +LN+LV AL+ N IL A R++ + + D FP+ A ++ R Sbjct: 51 WWRAFNDPALNQLVMQALRHNPDILTARSRVDQYRAQLRGAEGDNFPTLDAGVTSSRARA 110 Query: 109 I------PNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLI 161 I P + G L +++ +DL+G+R I+++ A L + A A+L + S + Sbjct: 111 ISAVTGQPYQYSVFQGLLQANYDVDLWGERSSSIDAAGATLAAQQAAAAAAELTIASSVA 170 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ E++ + L +++L+ +F G TS+L ++ +E ++ ++ +P Sbjct: 171 SGYMTLVSLDEQLRVTEATLASRDNSLKLAQRQFETGYTSRLEWLQSRSEYQTAKAQVPL 230 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L + +S L+G + N+F+ + +P+ L++ RPDI Sbjct: 231 LRHQIAQQENALSILVGMNPRRV-----ARQNHFEHLTVQTLPAVMPSQLLQRRPDIVQA 285 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPI 334 E++L + A + A++ L PSL+L S L DN F WS G + P+ Sbjct: 286 ERQLLAADASLRSARASLLPSLNLTASGTLQSSALHQLADNPF----RLWSIGGSILAPL 341 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 ++ + + + + ++ + +++ V A EV N L +I ++ + +L ++ + Sbjct: 342 LNREALTAQVDVSMATRNQALYNYEKVVRAAFSEVNNDLDAIERYQQQLDELLLQQQVAQ 401 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +++ ++ Y+ G S LD LD +R ++ + AK L + +DLY A+G G+ P Sbjct: 402 EALRIARNRYQNGYASYLDELDAQRTLFSTQLGVVQAKNNLLLAQIDLYRAMGGGWRP 459 >gi|1061410|gb|AAC43969.1| OpcM [Burkholderia cepacia] gi|1588602|prf||2209218A outer membrane lipoprotein Length = 512 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 115/472 (24%), Positives = 218/472 (46%), Gaps = 52/472 (11%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES---------------FNDTSLNKL 64 VGP+Y +P ++P F + L + W++ F D L+ L Sbjct: 32 VGPDYQRPDA-VVPAAFK--EAPTLAAGEQAGTWKTAEPSDGRTPRRMVKVFGDPVLDSL 88 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK-- 113 AL N + A R+ A+ S R+ FP A S + +F P Sbjct: 89 ETQALAANQNLKAAAARVEEARAATRSARSQWFPQVGAGFGPTREGLSSASQFQPQGTGP 148 Query: 114 TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 TN+T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 149 TNATLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQ 208 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + H+ ++L ++ ++L +F +G S+L + + + E+ S ++D + + + Sbjct: 209 LDSDQDLYHRTVELREQALKLVQRRFNEGDISELDVSRAKNELASAQADAVDVARRRAAS 268 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKL 285 H ++ LLG +F F+ +P+ + G+P+ L+ RPD+ E+ + Sbjct: 269 EHALAILLGKAPADFA---------FKETPIVPVAVKIPPGLPSALLERRPDVSAAERAM 319 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSFGP----KLYLPIFDKGK 339 A + A+IG+AKS + S G A++ D P ++ GP L LP+FD G+ Sbjct: 320 AAANARIGLAKSAYFRSSISPGRSAISVDARQPVPVVEPYFLLGPFAGTALTLPLFDGGR 379 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +++A + EQ +++ VL A +EVE+ L + + + AV +++ +L Sbjct: 380 RAAGVQQARAQYDEQGANYRQQVLVAFREVEDNLADLRLLDDQIRAQEAAVNASRRAATL 439 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S Y++G + LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 440 SRSEYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVSTVNLIRALGGGWG 491 >gi|187940046|gb|ACD39180.1| outer membrane channel protein PltO [Pseudomonas aeruginosa] Length = 248 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 125/243 (51%), Gaps = 3/243 (1%) Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 +AE++++ +P + S + I+ LLG ++ + N +G+P Sbjct: 6 KAELEALRGRLPAWQASETEATNRIAVLLGERPGALARALEAKPGNVLERALPDFRLGVP 65 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WS 325 ++L+R RPDIR E+ L + A IGIAK+ LYPS++L D F + + WS Sbjct: 66 SELVRQRPDIRAAEQSLHRATADIGIAKAALYPSIALGARFGYESYRDGKFGEWGSRAWS 125 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LP+FD G+ ++ +R E QE +T+Q TVL A +EV++AL+ + + + Sbjct: 126 IGPTLDLPLFDAGRRRTVVRLRELEQQEAAVTFQRTVLGAWQEVDDALSRYHAEYQRNLH 185 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 ++ +++ + + Y QG+ L+ +D +R + + + +L ++ L + LY Sbjct: 186 MRDKAASSRQAYEWTQVKYAQGQVDFLEEIDAQRTSMQAQRELIDSEALLRTQLIALYKT 245 Query: 446 IGS 448 +G Sbjct: 246 LGG 248 >gi|221211977|ref|ZP_03584955.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221168062|gb|EEE00531.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 496 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 114/471 (24%), Positives = 214/471 (45%), Gaps = 32/471 (6%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSIGNSK-----NLINIDTLKWWESFND 58 R + +L I +LAGC+ P Y+ P + + P ++ + WW F D Sbjct: 11 RRVVALGIAAVLAGCSTLPPYSPPSVEV-PAHYAGAQAGWDVAAPADAAPRGAWWTVFGD 69 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--------RFIP 110 LN L N T+ QA + A+ + A P+ A ++ R Sbjct: 70 ADLNALEARVDVSNQTVKQAVAELQRARAMVDYQHAGFLPTITAGVAQSRARVSQNRLGS 129 Query: 111 NLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +L +T + + W+ D+FG+ R + + AN D++ A ++ KL+V ++L Y Sbjct: 130 SLAGKTTPDYQAGVAASWEPDVFGRVRDAVAGAQANADASAADLEAVKLSVTAELATDYF 189 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + + + Y + L + GA ++ + + +++S + ++ S Sbjct: 190 ALRSLDTQKQLLDDTVRAYTDALTLLKQQLAAGAIDASAVAQAQTQLESTRTQDTDIDAS 249 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 H I+TL+G A+ F + Q+ + +P I G+PA L+ RPDI E++ Sbjct: 250 RAQLQHAIATLVGESASTFALPPRVQTFD------VPAIPAGVPAQLLERRPDIAAAERR 303 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIK 341 +A + A+IG A++ +P L L+ S L P + WS GP+L +FD G+ Sbjct: 304 VAAANAQIGEARAAFFPDLVLSASAGLESGFFAPWLSAPSLFWSLGPQLAGTLFDGGRRS 363 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++R A + +++TVL A ++VE+ L++++ Q A + S+ L+ Sbjct: 364 ASLRGAHAQYDGAVADYRQTVLVAFQQVEDQLSALDALASEARSQQRATDAADLSLRLTT 423 Query: 402 INYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G S LD++ + A + IA R++ ++ V L A+G G++ Sbjct: 424 NRFKAGAVSYLDVVTAQTIALTNRRLADQIAARRM-EAAVALMKALGGGWH 473 >gi|322421904|ref|YP_004201127.1| NodT family RND efflux system, outer membrane lipoprotein [Geobacter sp. M18] gi|320128291|gb|ADW15851.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M18] Length = 469 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 114/471 (24%), Positives = 212/471 (45%), Gaps = 38/471 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDT----LKWWESFNDT 59 I S+ LAGC++ P Y++P P+ P + G S + +T LKW + F + Sbjct: 7 ILSIAGAFLAGCSMAPRYSRPDAPV-PANWPTGPAYKSGASLTGETAAADLKWSQFFVNP 65 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST 117 L KL+ +AL N + A + ++ RAD P+ A+ S + +P + T Sbjct: 66 QLQKLIDLALANNRDLRVAALNVEKSRAQFRIQRADQLPTVEAAGSGVVQRLP-AGVSPT 124 Query: 118 GQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQ S ++ID FG+ R + + +L + ++++++++ +Y+ Sbjct: 125 GQSVISRNYNLSLGLSSYEIDFFGRVRSLTDQALKQFLATEQARRSFQISLVAEVGNNYL 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +ER+ +A L+ K L + + GA+S+L L + + + S D+ Sbjct: 185 TLAADRERLKLALDTLENQKAAYGLVQSRVSAGASSELDLRQAQTSVDSARVDVARYTSL 244 Query: 226 FRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ ++G TE L N + + G+P+++++ RPD+ E + Sbjct: 245 VAQDENLLTLVVGVQVPTELLPTGFSAVGNLRE-----LPSGVPSEVLQRRPDVMQAELQ 299 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ +P ++LN SI D F + W F P+ LPIF+ G+ K Sbjct: 300 LMAANANIGAARAAFFPRITLNTSIGTASDQLTGLFAPGSLAWGFVPQFTLPIFNYGRNK 359 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMS 398 + + AE +++ + +A +EV +AL ++ E + L +A +S Sbjct: 360 AGLAVAERDRDISLARYEKAIQSAFREVADALALNGTVGEQLQAQQSLTNAT---SESYR 416 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ Y G S L++LD ER+ + L + V LY +G G Sbjct: 417 LAQARYHGGVTSYLNVLDSERSFYTAQQGLISVNLARLSNLVTLYKVLGGG 467 >gi|134291701|ref|YP_001115470.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134890|gb|ABO59215.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 498 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 110/416 (26%), Positives = 195/416 (46%), Gaps = 25/416 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR-ADLFPSSYASISH---R 107 W F DT L L+ AL N + A R++ A+ + VR AD +P+ A ++ R Sbjct: 67 WHAYFVDTRLQALIAQALTNNRDLRAAVARVDEARA-VYGVRSADQWPTIGAGAAYARFR 125 Query: 108 FIPNLKTNST--GQL------DSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVIS 158 L T + GQL ++ W+ID +G+ R ++++ L ++ A L+V++ Sbjct: 126 TPGGLLTPAPMIGQLYEVQLAETQWEIDFWGRVRSLKAAALQRYLASDAARQATTLSVVT 185 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+ ERI + +D ++++ + L++ GA S+L L + E ++ ES Sbjct: 186 GVANAYLTLCEIDERIVLTRATIDTRRESLRIFRLRYAAGAISRLDLTQSEILLQQAESL 245 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 L+++ ++ L+G P + P+L G+P+ L+ RPD+ Sbjct: 246 GVQLQQARATAADALALLVGAPPELGAAPLALDDGAVLPSL----APGLPSSLLERRPDV 301 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLP 333 E +L S A IG A++ +P ++L +GS AL HD G WS P LP Sbjct: 302 IAAEHELQASRANIGAARAAFFPRIALTSAIGSGSSAL-HDLLTSGTGV-WSLIPSATLP 359 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + D G+ +SN+ A + E +++T+ A ++V +AL + + V + + Sbjct: 360 LIDGGRNRSNLALANAQRDEALARYEKTLQGAFRDVSDALAARHWLADQVAIERATLASQ 419 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L+ + Y G L++LD +R E L + +R L S V LY A+G G Sbjct: 420 AERARLAKLRYDSGATRFLEVLDAQRDLMNAEQQLVVTRRALLSSRVALYGALGGG 475 >gi|300778291|ref|ZP_07088149.1| NodT family RND efflux system, outer membrane lipoprotein [Chryseobacterium gleum ATCC 35910] gi|300503801|gb|EFK34941.1| NodT family RND efflux system, outer membrane lipoprotein [Chryseobacterium gleum ATCC 35910] Length = 471 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 118/476 (24%), Positives = 225/476 (47%), Gaps = 36/476 (7%) Query: 1 MNILRAI-FSLFIV-LLAGCTVGPEYTKPH----MPLLPTQFSIGNSKNLINIDTLKWWE 54 +NI++ I FS+FI+ ++ C EY +P L T +S N+ +I W E Sbjct: 5 LNIIKGITFSVFILGAISSCMARKEYERPKNVVDEKLFRTDMLPSDSTNIADIS---WKE 61 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F D L + AL+ NL I A E IN+A+ + +A P+ ++ F Sbjct: 62 IFTDPILQGHISKALENNLDIRIALESINSAEAYLKQSKAAYQPTLSIGPNYTFQTQSIN 121 Query: 115 NSTGQLDSD--------------WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 GQ+ + W+ D++G+ + E + LA A K +++S Sbjct: 122 TQFGQIIGERRYVNQFDITASIGWEADIWGKLKAQEKAQLATYLGTVAAHKAVKSSLVSS 181 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y F + I + + + +KN+E + G +++++ + EA + + +S + Sbjct: 182 IASAYYQLLTFDAQKRIITETIAVREKNLEATKALKASGTLTEVAVQQSEALVFNAKSLL 241 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ ++ + +S L+G P+ H +++ + Q L I + +G P L+ NRPD+ Sbjct: 242 IDIDTQIQLLENTMSLLMGEPS----HSIERSTLEGQ-KLPIDLKLGYPTQLLANRPDVM 296 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFD 336 E L ++ AK+ YP+L L GS L D+ F + + L PI + Sbjct: 297 RAEFNLMNAFQLTNAAKAQFYPTLKLTGSGGLQSVDIDHLFSVNSLFANVVAGLAQPILN 356 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 K +I++N + ++ + Y+ +++TVL A KEV +A+ + + Q ++ +KKS Sbjct: 357 KRQIQTNYDVSLANQETAYLNFRKTVLTAGKEVSDAIRVFSVQDSFIELKQKELDAYKKS 416 Query: 397 MSLS--MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S ++NY Y L++L+ + E+++S A+ K+ V+LY A+G G+ Sbjct: 417 VDYSQELVNYGMANY--LEVLNASVNSLNAELNISNARYSKMKAAVELYQALGGGW 470 >gi|33594666|ref|NP_882310.1| putative outer membrane efflux protein [Bordetella pertussis Tohama I] gi|33564742|emb|CAE44067.1| putative outer membrane efflux protein [Bordetella pertussis Tohama I] gi|332384077|gb|AEE68924.1| putative outer membrane efflux protein [Bordetella pertussis CS] Length = 494 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 108/470 (22%), Positives = 216/470 (45%), Gaps = 50/470 (10%) Query: 16 AGCTVGPEYTKPHMPL--------------LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 GC VGP+Y +P + + P Q S +++ +WW+ + D L Sbjct: 24 GGCAVGPDYQRPAIDVGAAYKEAAAPQPGWTPAQPSDESARG-------QWWQVYGDPVL 76 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ 119 + LV+ Q N ++ QA A+ + + RA FP+ + A ++ + Sbjct: 77 DGLVQQLNQGNYSVAQAEANYRQAQALVRNARAGFFPTIGAGADVTRSGSGGGSGAGSNG 136 Query: 120 LDS----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 W++D++G+ RR +ESS A ++ A + + +L+ + L+ +Y+ R Sbjct: 137 SSVGNQYSLSGSVSWEVDVWGRVRREVESSRAEAQASAADLAVTRLSAQAALVQNYLQLR 196 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+ + + Y++++ L+ ++ G K + ++++ + L+ Sbjct: 197 VLDEQKRLLDATVLAYERSLRLTQNRYEAGVVGKSDVAVARTQLENTRAQSIDLDWQRGQ 256 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G + F Q + P+ I G+P+ L+ RPD+ E++ A + Sbjct: 257 FEHAIAVLMGQAPSRFALPAQPFAQQL-PD----IPAGLPSQLLERRPDVAAAERRAAAA 311 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNI 344 A+IG+A++ +P L+L+ S F + T W+ GP L + +FD G + + Sbjct: 312 NAQIGVAQAAWFPDLTLSASGGF-RSGQFAEWLTAPARFWTLGPALAMTLFDGGARSARV 370 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMI 402 +A ++ Q ++++VL A++EVE+ L + E ++ V + +A+E ++S+ L+ Sbjct: 371 EQARAAYDAQAAAYRQSVLTALREVEDYLVQLRVMEHEQQVQR--NALESARESLRLARN 428 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y QG L + +E E + +S+ +L S V L A+G G+ Sbjct: 429 QYEQGLIDYLSVAVLETTALNTERNAISLLGSRLNAS-VQLIAALGGGWQ 477 >gi|294664283|ref|ZP_06729653.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605955|gb|EFF49236.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 496 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 114/479 (23%), Positives = 214/479 (44%), Gaps = 50/479 (10%) Query: 16 AGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQ 70 GC +GP YTKP + + +++ L WWE +D L +LV AL Sbjct: 18 GGCMLGPNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELHDPLLTQLVTQALA 77 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---------------- 114 + + A R+ A + RA+ P AS + + +T Sbjct: 78 DSPNLRAAQARLRANRALAQQRRAERLPKLNASAVYAYAEPPQTIVDTLGGLQQGQPGQP 137 Query: 115 ---------------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 S G D+ W++D FG+RR E +LA ++ A++ A++ + + Sbjct: 138 PTAGNQALDLEKTEIYSAG-FDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAA 196 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y++ R + R++IA L +++++L + QGA S L + ++ +++ ++ Sbjct: 197 EVGQVYLNYRGLQARLAIADANLGKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQQAQ 256 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNR 275 LE + + ++ ++G P + Q + QP +P + + LIR R Sbjct: 257 RLPLEMQSQEALDQLALMVGREPGA-----LDAQLSTPQPLPMLPTQVRVDDAGALIRRR 311 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+R E++LA S A+IG A + +P +SL G ++ S +N+ P L Sbjct: 312 PDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDARTTLAVPMLRW 370 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD GK ++ + +A + + ++ TVL A+++ +AL +K + + A Sbjct: 371 SIFDFGKTRAQVEQARAGNAGRTAAYEGTVLAALQDANSALARFGSARKQLVVARQAEAS 430 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S L G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 431 ATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|309700428|emb|CBI99719.1| probable outer membrane lipoprotein SilC precursor [Escherichia coli ETEC H10407] Length = 562 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 224/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 113 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 171 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 172 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 231 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 232 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 291 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 292 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 351 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 352 RAVPSEKGMKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 403 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 404 AAFFPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 463 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 464 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 523 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 524 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 560 >gi|187928753|ref|YP_001899240.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12J] gi|187930014|ref|YP_001900501.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12J] gi|187725643|gb|ACD26808.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] gi|187726904|gb|ACD28069.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] Length = 505 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 105/469 (22%), Positives = 217/469 (46%), Gaps = 46/469 (9%) Query: 20 VGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTL--KWWESFNDTSLNKL 64 VGP++ P P LP Q S G ++ ++ + +WW++F LNK Sbjct: 34 VGPDFKTPDAPKVTGYTPKPLPQQTSAAATQGGEAQRFVSGMPVSDQWWKAFQSEKLNKT 93 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-----FIPNLKTNS 116 + A+ + T+ A + A++ + + FP SY + P L + + Sbjct: 94 IADAISASPTLAAAQAALRVAQQQTRAQQGAFFPMLQGSYQPSRQQNAVGTISPTLTSGA 153 Query: 117 ------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T QL + D+FG RR +ES A ++ Y Q++ A L + S ++ + + Sbjct: 154 PIYTLHTAQLTVSYAPDVFGLNRRQVESLKATEEAQYFQMEAAHLTLASNIVVAAVQEAS 213 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +I +I+ + + ++ H +F GA + L + E + E +P L+K + Sbjct: 214 LRAQIEAQQRIVGINTQLLDNLHKQFALGAVTGLDIAAAETALAQAEQALPNLQKQLAVQ 273 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLAD 287 ++ L G +E + ++ F + +P + + +P+DL+R RPD+R E++L Sbjct: 274 RDLLAALAGKLPSEGI----AETFTF-ADFTLPQDLPVSLPSDLVRQRPDVRAAEEQLHA 328 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A++G+A +++ P L++ G+ T + F N WS + FD G + + Sbjct: 329 ATAQVGVAIANMLPQLTITGTKGGTAEIFSQMFRDGNVFWSLVGNVAQTFFDGGAMLAKK 388 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R A++ + ++ TV+ A + V + L +++ D ++ + + ++++++ Sbjct: 389 RAADAGVDQAEAQYRGTVITAFQNVADTLHALDADADVLKAALRSEQAAHRTLNITDRQR 448 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 G+ ++L +L+ E+A + V +I R A + D L+ A+G G+ Sbjct: 449 AIGQVNILAVLNAEQAY-QTAVQATIGAR--ANRFADTAALFQALGGGW 494 >gi|319900620|ref|YP_004160348.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides helcogenes P 36-108] gi|319415651|gb|ADV42762.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides helcogenes P 36-108] Length = 457 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 111/469 (23%), Positives = 213/469 (45%), Gaps = 46/469 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG---------NSKNLINIDTLKWWESFN 57 I S +LL+ C V +Y KP T+ S G + + +++ + W E F Sbjct: 7 ILSAAGLLLSSCGVYTKY-KP-----ATEVSDGLYGEDTTEVQAADTLSLGGIPWQELFT 60 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D L +L++ LQ N L A R+ A+ +LS R PS +A + + Sbjct: 61 DPCLQRLIEQGLQTNTDYLSAQLRVEEAQATLLSARLAFLPS-FALAPQGTVSSFDGGKA 119 Query: 118 GQ-----LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q + + W++DLFG R+ + S A L + + +I+ + +Y Sbjct: 120 SQTYSLPVTASWQLDLFGGLRNARKQSKALLAQSEDYRQAVRTQLIAGIANTYYTLLMLD 179 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++++ Q +++ + + G ++ + ++E + S+++ + TL++ + Sbjct: 180 EQLALTEQTAQAWEETVRAARALMQAGQYNEAGVSQMEGTLYSVQASVLTLKEQINQTEN 239 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +++ LL A HY ++ L ++G+P L+ RPD+R E+ L + Sbjct: 240 SLALLL---ADTPRHY--ERGALADSRLSSEYSVGVPVSLLSARPDVRSAERTLEAAFYG 294 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A+S YPS++L+GS T+ PG + G L P+F +G++ + R A Sbjct: 295 TNAARSAFYPSITLSGSAGWTNAAGSMIVNPGKFLASAVG-SLTQPLFARGQVVAQYRIA 353 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLS 400 ++ +E + +Q+ VLNA EV +A+T+ + K V+ LQ A+ +S SL Sbjct: 354 KARQEEASLAFQQAVLNAGSEVNDAITACQTSRAKSALLEKQVSSLQSAL----RSTSLL 409 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 M G + L++L ++ ++ + + +S ++LY A+G G Sbjct: 410 M---EHGTTTYLEVLTARQSLLSAQLSQASNRFTELQSLINLYQALGGG 455 >gi|294624989|ref|ZP_06703640.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600711|gb|EFF44797.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 496 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 114/479 (23%), Positives = 214/479 (44%), Gaps = 50/479 (10%) Query: 16 AGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQ 70 GC +GP YTKP + + +++ + L WWE +D L +LV AL Sbjct: 18 GGCMLGPNYTKPPAVADAAMQAPALHRASGADVVAVAPLNHWWEELHDPLLTQLVTQALA 77 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT---------------- 114 + + A R+ A + RA+ P AS + + +T Sbjct: 78 DSPNLRAAQARLRANRALAQQRRAERLPKLNASAVYAYAEPPQTIVDTLGGLQQGQPGQP 137 Query: 115 ---------------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 S G D+ W++D FG+RR E +LA ++ A++ A++ + + Sbjct: 138 PTAGNQALDLERTEIYSAG-FDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAA 196 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y++ R + R++IA L +++++L + QGA S L + ++ +++ ++ Sbjct: 197 EVGQVYLNYRGLQARLAIADANLGKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQQAQ 256 Query: 219 IPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNR 275 LE + + ++ ++G P + Q + QP +P + + LIR R Sbjct: 257 RLPLEMQSQEALDQLALMVGREPGA-----LDAQLSTPQPLPMLPTQVRVDDAGALIRRR 311 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+R E++LA S A+IG A + +P +SL G ++ S +N+ P L Sbjct: 312 PDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDARTTLAVPMLRW 370 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD GK ++ + +A + + ++ TVL A+++ +AL K + + A Sbjct: 371 SIFDFGKTRAQVEQARAGNAGRTAAYEGTVLAALQDANSALARFGSAGKQLVVARQAEAS 430 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S L G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 431 ATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|90424860|ref|YP_533230.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] gi|90106874|gb|ABD88911.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB18] Length = 551 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 108/476 (22%), Positives = 213/476 (44%), Gaps = 48/476 (10%) Query: 13 VLLAGCTVGPEYTKPH-------------MPLLPTQFSIGNSKNLINIDTL--KWWESFN 57 +LL+GC VGP++ P P + ++ + G + + + +WW FN Sbjct: 37 LLLSGCMVGPDFEPPLPPDVSGYTPQAGLRPAMASEIAGGAPQRFVEGLEVGGQWWREFN 96 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 +N V+ A+ + + A + AA+E L R L P S +S + + +P Sbjct: 97 SPQINAFVEEAVHNHPNVRAAQYALRAARETALQTRGALAPQISGQSSATRQQVPAAAGG 156 Query: 116 STGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +TG ++ + +DLFG RR +ES+ A +++ L + + ++ S Sbjct: 157 TTGAPSIYNLYDATVNVSYTLDLFGGLRRQVESAEALAQYRRFEMEATYLALTANVVTSA 216 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + +I+ + I+ ++ +F GA S+ ++ A + ++ +P L+K Sbjct: 217 ISDASLRAQIAASQAIIKAQTDQLQRVQRQFEVGANSQAEVLAQRATLAQTQATLPPLQK 276 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQ 281 + + LG P+ + + +S N +L +P + + +PA L+R RPDIR Sbjct: 277 QLAQGRNQLMAYLGRLPSQD-----RGESVNLS-SLRLPRKLPVSLPAHLVRQRPDIRQA 330 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E L + A +G+ ++L P ++ G+ ALT F + ++ L + D G Sbjct: 331 EATLHQAAALVGVNTANLLPQFTITPSAGTDALTVGQLFTPQSAAFTLAANLGQKLVDGG 390 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK-KSM 397 + + +S ++ Y +Q T++ A + V +AL ++ D + + Q A E S+ Sbjct: 391 QAYRTKEASVASFEQDYALYQSTIITAFQNVADALRAVQFD-AVTLRAQGAAEKAALDSL 449 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 +++ ++ G I+ ++ T + V L I + A Y D L+ A+G G+ Sbjct: 450 TMAQEQFKSGAIGYAIIITAQQ-TYQNAVILRIQAQ--AMRYADTVALFQALGGGW 502 >gi|283856493|ref|YP_163260.2| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775497|gb|AAV90149.2| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 1027 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 106/433 (24%), Positives = 199/433 (45%), Gaps = 43/433 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV----RADLFPSSYASISH 106 +WWE FND LNKL++ + + ++ QA A N L+V R+ ++PS S+ Sbjct: 568 RWWELFNDPELNKLIERSDVASQSVAQA----EATWRNALAVMGQNRSSMWPSISLGASN 623 Query: 107 RFIPN---------------------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 + + + N L W D FG RR IE+S A ++ Sbjct: 624 QHTVSGGGSEVVNTAGGGSSTVSSSNISDNYRAGLSMSWTPDFFGGVRRQIENSRATAEA 683 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A ++ A+L + + + SY+ R I++ Q + Y +E++ +F G + Sbjct: 684 NMADIETARLALHAGVASSYLQLREADAEIAVMEQTIAAYTHALEVARNRFNAGIAPESD 743 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-I 263 + + E ++ + S I +L ++ R IS +G PA +F H + N++ P +P + Sbjct: 744 VFQAETQLSNTRSQIESLRQNRRTYEDAISIYVGIPAGDF-HIEPR--NDWSP--VVPDV 798 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGY 320 + +P+ L++ RPDI E+K+ + A IG+ K+ YPS S++ G A Sbjct: 799 PLELPSTLLQRRPDIASAERKIEAASATIGVRKAAFYPSFSMSPYAGDTAGDITRLLAQS 858 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 ++ WS G + + D G S + +A ++ + +++ VL A + V + + + Sbjct: 859 SSIWSVGASMAFTVLDWGSHLSQLHQARAAYSQAVANYRQVVLQAYQNVADEIAATQIYG 918 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--S 438 T L A + +S ++ Y+ G + D++ +E T+ + S+ + QLA+ + Sbjct: 919 NQETHLNDAFKNADRSEQATLKRYQVGLVAYTDVVTVE--TSALSAKRSLMQTQLARQTA 976 Query: 439 YVDLYIAIGSGYN 451 V L A+G G+ Sbjct: 977 AVSLIQALGGGWT 989 >gi|296102315|ref|YP_003612461.1| copper/silver efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056774|gb|ADF61512.1| copper/silver efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 461 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 114/474 (24%), Positives = 235/474 (49%), Gaps = 39/474 (8%) Query: 1 MNILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTL----KWWE 54 M +L+ + + +L GC ++ PEY +P P+ P QFS+ S+N L ++ + W Sbjct: 1 MFLLKRLSITTVFILTGCVSLAPEYQRPTSPV-PQQFSL--SRNSLTPVEGMYQDTGWRN 57 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F D + L+ AL+ N I A ++ A+ AD +P AS + LK+ Sbjct: 58 FFVDPQIAGLITEALKNNRDIKMAALKVEEARAQFNVTDADRYPQLNASSGVTYSGGLKS 117 Query: 115 N--STGQLDS----DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + ++ Q D+ +++D FG+ +++ ++ N ++ + +++ + SY + Sbjct: 118 DKPTSQQYDAGLALSYELDFFGKLKNMSDADRQNFFASEEARRAVHILLVANVSQSYFNQ 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + +++ IA L Y+++ + G+T+ L+L + +I+S ++I E Sbjct: 178 QLAYKQLRIARDTLSNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGELA 237 Query: 228 MNVHNISTLLG----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + +LG P + ++ +++ P L +P ++ + ++ RPDI E Sbjct: 238 QANNALQLVLGTYRALPGDDGMN-----ASDIAP-LTLPPHLS--SAILLQRPDIMEAEY 289 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGK 339 +L + A IG A++ +PS+SL ++ T G T W+F PK+ +PIF+ G+ Sbjct: 290 QLKAADANIGAARAAFFPSISLTSGLS-TGSTELSGLFTSGSGMWNFIPKIDIPIFNAGR 348 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 K+N++ AE Q+ + +++ + +A K+V +AL + + + Q ++ ++ Sbjct: 349 NKANLKLAEIRQQQSVVNYEQKIQSAFKQVADALALRDSLSQQLAAQQRYLDSLNITLQR 408 Query: 400 SMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y +G S +++LD ERA T + +DL I RQ+ + ++L+ A+G G+ Sbjct: 409 ARGLYTRGAVSYIEVLDAERALFSTQQNILDL-IYARQVNE--INLFTALGGGW 459 >gi|73538163|ref|YP_298530.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72121500|gb|AAZ63686.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 499 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 105/468 (22%), Positives = 205/468 (43%), Gaps = 37/468 (7%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLK---------WWESFNDTSLNKLVK 66 GC++ P Y P P T + + + T WW+ F D L++L+ Sbjct: 24 GCSLAPTYKVPETPTAATFKEADAAAAEGAQWKTAAPAEGQHRGDWWKIFGDAELDRLID 83 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNL----- 112 A N + A R+ A+ + ADL+P S S + + +P+ Sbjct: 84 AANSYNQDLAAAAARLKQARAFTGATEADLYPQLSVGLDPTRSQPSAASQGLPDGTRVAP 143 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T + + +++DLFG+ + ++ A+ A +L + + +Y R Sbjct: 144 QTVLKARAFASYELDLFGRVASSVNAARADEQGAEDLYRSVQLALQADTAQAYFALRTLD 203 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ + + L + + L ++ G T+ L + EAE+ + +D+ +E+ H Sbjct: 204 SERNLLNATIKLREDALNLLRKRYEAGETTDLDPARAEAELGTARADLAGIERRRANQEH 263 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G ++F + + + P + + G+P++L+ RPDI E+++A + A+ Sbjct: 264 ALAVLTGVSPSQF--GLAAKPFDTAP---VAVPAGLPSELLERRPDITAAERQMAAANAR 318 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKL----YLPIFDKGKIKSNI 344 IG+AK+ +P +SL N F + W GP L +FD G+ SN+ Sbjct: 319 IGVAKAAFFPRISLTALFGFESADLSNLFKWSSRTWMLGPLLGSTVAQTVFDGGRNSSNL 378 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A ++ +E +++TVL A +EVE++L + + T L A+ +++ S Y Sbjct: 379 AGARAAHEESVARYRQTVLVAFREVEDSLADVRWLSQQATALDSALAGARRAQRTSRSRY 438 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G L ++D +R + + D + A + V L ++G G+ P Sbjct: 439 DAGAVDYLTVIDADRTVLQSQRDANAVAGLRAAATVALVRSLGGGWGP 486 >gi|325925600|ref|ZP_08186985.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325544000|gb|EGD15398.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 501 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 218/484 (45%), Gaps = 36/484 (7%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------- 51 M +R V +L+GCT+ P YT+P P+ P QF+ + T Sbjct: 1 MTTIRTTLCALGVASVLSGCTLMPRYTRPDAPV-PAQFAGTDVSAAPPAATADSGSAADA 59 Query: 52 -------WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----- 99 W + F D +L +++ +AL N + A I A+ RA L P+ Sbjct: 60 AYIADIGWRQVFTDPALQQVIALALDNNRDLRVAALNIEVARAQYRVDRAALLPAIEGTG 119 Query: 100 ---SYASISHRFIPN----LKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVD 150 + + S IP +T S S +++DLFG+ R + E +L L +A A+ Sbjct: 120 TANNARTPSELAIPGQPQVFRTYSANIGVSAYELDLFGRVRSLKEQALQQFLFTAEARRS 179 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +++++++ +Y+ ++ + +A L ++ L F GA S+L+L + + Sbjct: 180 T-HISLVAEVATAYLTLAADQQLLQLAQSTLASQSESYRLQQRSFELGAASQLTLRQAQT 238 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPA 269 +++ D+ + + + L+G E L + + + + N+ + G+P+ Sbjct: 239 TVETARVDVERYTAQVAQDRNALVLLVGTQVPVELLPHALPDNASVEGNVLASVPAGLPS 298 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSF 326 L++ RPDI E+ L + A IG A++ +PS+SL S + + F WSF Sbjct: 299 QLLQRRPDILEAERNLRAANANIGAARAAFFPSISLTASTGSSSSSLSRLFDAGTRAWSF 358 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L LPIF+ G+ ++N+ A+++ + +++++ +A +EV +AL + + + Sbjct: 359 VPTLTLPIFNAGRNRANLDMAKANRDIEVARYEKSIQSAFREVSDALAQRDTLGRQLQAQ 418 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q V+ S LS + +G S L LD +R+ + L + + V Y A+ Sbjct: 419 QALVDATADSYRLSQARFERGIDSYLQALDAQRSLYSAQQTLINTQLSRFTNLVTFYKAM 478 Query: 447 GSGY 450 G G+ Sbjct: 479 GGGW 482 >gi|299771585|ref|YP_003733611.1| putative outer membrane protein precursor [Acinetobacter sp. DR1] gi|298701673|gb|ADI92238.1| putative outer membrane protein precursor [Acinetobacter sp. DR1] Length = 468 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 118/446 (26%), Positives = 206/446 (46%), Gaps = 17/446 (3%) Query: 15 LAGCT--VGPEYTKPHMPLLPT-QFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQ 70 L GC V Y P + + + Q+ +KN+ + + +WW FND LN+LV L+ Sbjct: 18 LVGCAAVVKTPYETPAVQVPGSFQYDTAKAKNMSADQYSDRWWTLFNDAQLNQLVSNVLE 77 Query: 71 QNLTILQATERINAAK--ENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD----SDW 124 +N + A + A+ ++ + + L SS S H F N +S+ L + Sbjct: 78 RNSDLAVAGIALKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSSKGLSLSAGVSY 137 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ R E+S + + ++I+ Y + ER + A Q L Sbjct: 138 ELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYTTAQQSLAT 197 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K +L +++ GA S + L + E ++S ++ + +E+ I+ LL P Sbjct: 198 SQKLYDLVQIQYKAGAVSGVDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLLHEP--- 254 Query: 244 FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 L + Q P +P I G+PAD++ RPD++ E +L ++A K+ YPS Sbjct: 255 -LQQLNIQEPKRLPRTALPAIGAGLPADILSRRPDLQASELRLRKALATKDATKASYYPS 313 Query: 303 LSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 +SL S+ + + N + G L LP +K +I + ++ I +++T Sbjct: 314 ISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAIIQYRQT 373 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + A +VENAL+S E K V + VEL +K+ L+ + YR G +L +LD ++ T Sbjct: 374 LYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLLDAQQTT 433 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIG 447 + L K+ +YV L A+G Sbjct: 434 RTARLSLVETKQSQYNAYVTLMQALG 459 >gi|30248677|ref|NP_840747.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30180272|emb|CAD84579.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 462 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 39/468 (8%) Query: 6 AIFSLF-IVLLAGCTVGPEYTKPH-MPLLPTQFSIGNSKNLINID-TLKWWESFNDTSLN 62 ++FSL + L C E P +P +F + ++ +WW F+DT L+ Sbjct: 5 SLFSLVALTSLVACGTTSEVRTPSSLPAAQMEFIEARTPGVVTTALPAQWWHLFDDTELD 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY-----------ASISHRFIPN 111 V+ AL N + A + A+ + A P++ S IP Sbjct: 65 AHVERALTANADLHIAIANLETARAMVRQADAIRLPATVIESGAGPDQADKQPSTSSIP- 123 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 KT+ ++IDLFG+ + ++ A+ ++ A VD A++ V+ + +YID Sbjct: 124 -KTSYELGATVAYEIDLFGRLSSGVRAARADAAASAALVDAARIAVVGDTVAAYIDYCGA 182 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++ ++ ++ + +L +F +G S L + + + ++ +++ LE R + Sbjct: 183 VQTRTLTKSLVRAHEHSFQLIDQQFQEGEVSPLEVAQAQTVLQRARANLAPLEADRRRAL 242 Query: 231 HNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++TL G+P AT+ H S + P + +P+ +G L+ RPD+R E+++ + Sbjct: 243 FRLATLEGFPPSATDGWHL----SCHSIPKIEVPLPVGDGTALLARRPDVREAEQRVIAA 298 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A+I IA +DLYP +SL S+ L F T P + P ++ +++ I A+ Sbjct: 299 TARIDIAHADLYPKISLGSSLGLIA-GRFDAILT-----PLITWPFPNRSAVRARIAAAK 352 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 TW +L A++EVE AL ++ T L A+ +K++ + +R G Sbjct: 353 GQEAAALATWDAVILRALREVETALADYRAEQVRRTDLMSALIESEKAVRRAQARFRLGA 412 Query: 409 YSLLDILDIER-----ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L +LD ER AT DL IA+ Q+A L+ A+G G+ Sbjct: 413 DSYLLVLDAERTRTDIATLTATSDLRIAQIQIA-----LFRALGGGWK 455 >gi|163856921|ref|YP_001631219.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163260649|emb|CAP42951.1| outer membrane efflux protein [Bordetella petrii] Length = 495 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 118/477 (24%), Positives = 219/477 (45%), Gaps = 29/477 (6%) Query: 1 MNILR-AIFSLFIVL-LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTL-- 50 MNI R + L + L LAGC VGP+Y P + P F + D + Sbjct: 1 MNIRRLRMLPLGVALALAGCAAVGPDYRVPDGAAVNRPTASAGFQQARA-TAFRQDAVPG 59 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYAS 103 WW + D +L+ LV ALQ N + A + A+ R P ++ Sbjct: 60 AWWRLYRDPTLDALVGQALQANTDLRIAAANLQRAQAATREARGQQQPMLGVNATPTFGH 119 Query: 104 IS--HRFIPNLKT----NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 +S P+ + + +G + ++ DLFGQ RR IE++ + +A A D A++ V Sbjct: 120 VSGVQAGAPDARPPDSWSYSGGISVAYQADLFGQIRRAIEAASGDEQAAQAAYDAARVTV 179 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y D +++ A + + + +++ G + L + + ++++ ++ Sbjct: 180 AAETAHAYADICAAGMQLASARHSVQVQRDSLDAVQRLQQAGRGTMLDVTRARSQLEQLQ 239 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +D+P + S R ++ ++ L G+ E + + P L PI +G A L+R RP Sbjct: 240 ADLPPFQASQRTALYRLAALTGHTPAEMPAALLDCARP--PRLAQPIPVGDGAALLRRRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPI 334 D+R E+ LA + A+IG+A ++LYP+++L S + G WS GP + + Sbjct: 298 DVRQAERALAAATARIGVATAELYPTITLGLSGGSAGPAAIAGERGTFSWSIGPLISWTL 357 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 + G ++ I +A + A + TVL A++E E+AL + LQ A + Sbjct: 358 PNTGAAQARIAQARADAGAALARFDATVLGALRETESALVTYARQLDREATLQAARDQSA 417 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + + G+ L +LD +R A E L+ ++ L+ + L++A+G G+ Sbjct: 418 LAAAQARQLFAAGKTDYLTVLDAQRTLAGTESALAASQAALSSDQIALFLALGGGWQ 474 >gi|298480457|ref|ZP_06998654.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] gi|298273278|gb|EFI14842.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] Length = 467 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 117/461 (25%), Positives = 205/461 (44%), Gaps = 37/461 (8%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 17 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTANFGN---LPWREVFTDPQLQS 73 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-Q 119 L++ L+QN +L A + + AA+ +++S R PS S F N T + Sbjct: 74 LIETGLKQNTDLLSAAQNVKAAEASLMSARLAYAPSLGLSPQGTISSFDKNAATKTYSLP 133 Query: 120 LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W++DLFGQ +R + +L AY Q + VIS + Y ++ Sbjct: 134 VTASWQVDLFGQLLNAKRGAQVALKQ-TKAYRQA--VQTQVISNIANMYYTLMMLDRQLE 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNVHN 232 I ++ KKN E A ++ +E A + + IP +E+S R + Sbjct: 191 ITKATAEILKKNAETME-AMKDAAMYNINSAGVEQSKAAYAQVLASIPDIEQSIRETENA 249 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +STLLG E H +++ Q L ++ G+P L+ NRPD++ E LA Sbjct: 250 LSTLLG----EAPHAIKRGVLEAQV-LPTELSAGVPIQLLSNRPDVKAAEMSLAGCYYDT 304 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A++ YP ++L+GS T+++ PG G L P+F +G+ + ++ A+ Sbjct: 305 NSARAAFYPQITLSGSAGWTNNSGAGIVNPGKLLASVVG-SLTQPLFYRGQNIARLKAAK 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ +++Q+ +LNA EV NAL+ + + V Q VE KK+ + + G Sbjct: 364 AQEEQAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRQMQVESAKKASEDTKELFNLGT 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L ++A ++ ++ V LY A+G G Sbjct: 424 STYLEVLSAQQAYLSAQISQVSDCFDRMQAVVSLYQALGGG 464 >gi|170021415|ref|YP_001726369.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli ATCC 8739] gi|169756343|gb|ACA79042.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli ATCC 8739] Length = 461 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 110/457 (24%), Positives = 226/457 (49%), Gaps = 27/457 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 12 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 131 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-Y 239 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Y Sbjct: 191 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 250 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A M+ P + +P N+ + ++ RPDI E +L + A IG A++ Sbjct: 251 RAVPSEKGMK--GGEIAP-VKLPPNLS--SQILLQRPDIMEAEYQLKAADANIGAARAAF 305 Query: 300 YPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS++L ++ + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ + Sbjct: 306 FPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQSVV 365 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++ + +A K+V + L + + + Q ++ + ++ + Y G S +++LD Sbjct: 366 NYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEVLD 425 Query: 417 IER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 426 AERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|332525762|ref|ZP_08401909.1| putative outer membrane protein [Rubrivivax benzoatilyticus JA2] gi|332109319|gb|EGJ10242.1| putative outer membrane protein [Rubrivivax benzoatilyticus JA2] Length = 477 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 101/422 (23%), Positives = 195/422 (46%), Gaps = 29/422 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW F DT+L+ LV+ AL ++ A R+ A + A P ++ R Sbjct: 51 RWWAGFGDTTLDTLVERALAGQPSLQVAAARLRQADAAVGVASAGRLPQVQGTLDMTRQR 110 Query: 108 FIPN----------LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 F N + N+ Q+ + W++DLFG QR I ++L +A A++ A++ + Sbjct: 111 FTENGPYPPPLAGSYEWNNGAQIGASWELDLFGRQRATIAAALGQRRAAEAELQAARVLL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ Y++ E +A Q L ++ + L + G + + L + E I Sbjct: 171 AANVVAGYVNLGRLVENRGVARQSLAQREQILALVRQRIAAGLDTTVELRQAEGLIAQSR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 D+ L++S H ++ L G + + + S P P+ G+PADL+ R Sbjct: 231 VDLEALDESTARARHALAELTG----QGPNALDGLSPALAPLRSTPLPAGLPADLLGRRA 286 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 D+ Q ++ ++ ++ +A++ YP++SL G +L D+ + + GP L LP Sbjct: 287 DLVAQRWRVESAMREVDVARAAFYPNVSLTAFAGFSSLGLDDFLKASSRNLGIGPALSLP 346 Query: 334 IFDKGKIKSNI--RRAE-SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IF+ G++++N+ R AE +A E Y +L A++EV + + + ++ A Sbjct: 347 IFEGGRLRANLGARAAEVDAAVEGY---NGALLRALREVADEVAGLQSLERQQRAQAEAG 403 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +L++ Y+ G + L +L+ + A+ + R L+ S V L A+G G Sbjct: 404 AAADAAYALAIQRYQAGLGNFLTVLNAQTNVLAQSRAATELKARHLS-SEVALTRALGGG 462 Query: 450 YN 451 ++ Sbjct: 463 WS 464 >gi|206890561|ref|YP_002249414.1| outer membrane protein OprM [Thermodesulfovibrio yellowstonii DSM 11347] gi|206890954|ref|YP_002249364.1| outer membrane protein OprM [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742499|gb|ACI21556.1| outer membrane protein OprM [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742892|gb|ACI21949.1| outer membrane protein OprM [Thermodesulfovibrio yellowstonii DSM 11347] Length = 465 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 112/462 (24%), Positives = 212/462 (45%), Gaps = 44/462 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINID------TLKWWESFNDTSLNKLVKIALQQ 71 CT+ PEY +P P+ P ++ G++ + IN + +KW E +T L K+++ AL Sbjct: 17 CTMIPEYKRPDAPV-PKEWPQGDAYSSINYEKSPKATEIKWNEFLTETKLQKIIEKALSN 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYA-SISHRFIPNLKTNSTGQLDS-------- 122 N + + + A RA+L P+ A +R + TG+ ++ Sbjct: 76 NRDLRLSALNVERAAAYYGIQRAELLPAVDAIGTGYRERTPADLSRTGRAETTSKYSVSL 135 Query: 123 ---DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFG+ R + E +L + A+L++IS + +Y KE + +A Sbjct: 136 GITSWEIDLFGRLRSLKEMALEQYLAQEQTHRAARLSLISAVATAYYTYATDKENLKLAK 195 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L ++ EL ++ G S++ L ++ ++ + + ++ + + + L G Sbjct: 196 ETLKNQQEYYELMKKRYEVGVISEIDLHRVRTQVDTAREAVARYTQALAQDKNTLDLLAG 255 Query: 239 YPATEFLHYMQKQSNNFQPNLYI-----PINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 TE L L + I+ G+ +D++ NRPDI E L A+IG Sbjct: 256 EILTEEL---------LPEGLEVLTSPKDISPGLSSDILLNRPDIMAAEHTLKAYNAQIG 306 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P +SL G+ + F + WS P+ +PIFD ++ + A+ Sbjct: 307 AARAAFFPRISLTTLFGTASAELSGLFESGSKAWSIQPQAIMPIFD-ARVWAAHEAAKVE 365 Query: 351 AQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 Q + +++T+ A KEV +AL +++E + + L H++ +++ L+ I Y G Sbjct: 366 RQLALVNYEKTIQTAFKEVSDALAVKGTVDEQLQAIESLVHSL---RETYRLAKIRYENG 422 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S + +LD +R+ + + L+ K Q + + LY IG G Sbjct: 423 IDSYMSVLDAQRSLFQAQQQLNSLKLQKYANLLTLYKVIGGG 464 >gi|121607348|ref|YP_995155.1| RND efflux system outer membrane lipoprotein [Verminephrobacter eiseniae EF01-2] gi|121551988|gb|ABM56137.1| RND efflux system, outer membrane lipoprotein, NodT family [Verminephrobacter eiseniae EF01-2] Length = 478 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 21/460 (4%) Query: 7 IFSLFIVL-----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN---IDTL-KWWESFN 57 IFSL VL L C VGP+Y +P M L P + + ID+ +WWE++ Sbjct: 14 IFSLLGVLACALFLGACAVGPDYVRPAMDL-PVVYKEQGPWKIATPGRIDSRQRWWEAYQ 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS- 116 D LN L+ A + N I A + A+ A L+P + S N N+ Sbjct: 73 DAVLNDLIDQANRANQNIRFAEAQYRQAQAAAAIAHAGLWPEVSGNASRARSSNGAENTY 132 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L++ W++D++G+ RR E+ A ++ A + A+L++ + L +Y+ R + Sbjct: 133 AAGLNASWEVDIWGRVRRLAEAGDAGSEAGAASLAAARLSIQAALAQNYLQLRVTDLQKD 192 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + + Y ++++L ++ G + + + E +++S ++ L+ + H I+ Sbjct: 193 LYARTVADYTRSLQLIRHQYDAGVALRSDVAQAETQLRSAQAQWIDLDATRTQLEHAIAI 252 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G F Q P+ I G+P+DL+ RPDI E+ A + A IG+A Sbjct: 253 LIGKAPAAFTLAAQTTLQASMPS----IPAGVPSDLLERRPDIANAERLAAAANANIGVA 308 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P+L+L+ + + ++T WS G L +FD G + +A ++ Sbjct: 309 RAAWFPALTLSAAGGYSGSAFSQLFDTPGRVWSLGSALAALLFDGGARHARNDQARAAFD 368 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 T+++TVL+ ++EVE+ L+++ + AV+ + S L+M Y+ G + L Sbjct: 369 AAVATYKQTVLSGLQEVEDNLSTLRVLAQESQVQDQAVKAAQLSERLAMSQYQAGTSTYL 428 Query: 413 DILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + A+ A + + RQL S V L A+G G++ Sbjct: 429 SVLTTQAASLANQRGAVQLLGRQLLAS-VSLIKAVGGGWH 467 >gi|330810842|ref|YP_004355304.1| outer membrane efflux protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378950|gb|AEA70300.1| outer membrane efflux protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 464 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 105/427 (24%), Positives = 205/427 (48%), Gaps = 34/427 (7%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D +WW F LN+L++ A + + A R+ A+ + + A L P+ A ++ Sbjct: 45 DNQQWWTHFGSPQLNRLIEQARLDSHDLAAAMARVRQAEASAVIAGAPLLPAVTAGLNGN 104 Query: 108 FIPNLKTNSTGQLDSD----------------WKIDLFGQRRHI-ESSLANLDSAYAQVD 150 L+ QLD D +++D +G +R +S+L L ++ Sbjct: 105 RQQLLRGKGYSQLDVDRNNRTIDYYDANLSATYELDFWGGKRAARDSALKTLSASQFDRA 164 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +L ++S + +Y A +E+ IA Q L ++ ++L ++ G+ + L L + ++ Sbjct: 165 TVELTLLSGVANNYTQALSLREQQRIAEQNLGNAQRVLDLVQTRYDAGSATALELSQQKS 224 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + + + +P +++ R + ++TLLG P + + ++F + I+ G+P+ Sbjct: 225 LVAAQQRRLPQVQQQAREALITLATLLGQP----VQSVTLDDDSFDRLHWPAIDAGVPSQ 280 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPK 329 L+ RPDI E +LA + A I +A++ + PS++L S+A D + N ++ G Sbjct: 281 LLSRRPDIAAAEARLAAAQADITVARAAMLPSVTLGLSLATGADIADQLLRNNVYNLGAG 340 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQH 388 L PIF+ G++K+ R + +E ++ ++N +VE AL IN D++ + Sbjct: 341 LAAPIFNNGRLKAERDRTIARQEELLDLYRAAIINGFADVEKALNGINGLDRQ---RQWQ 397 Query: 389 AVELHKKSMSLSMIN--YRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLY 443 + ELH+ + + Y+ G LL +L+ +R A + V L +A+ Q + V LY Sbjct: 398 SEELHQAQTAFDIAQRRYQAGAEDLLTVLETQRTLFAAQDMNVQLRLARVQ---ASVALY 454 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 455 KALGGGW 461 >gi|117676236|ref|YP_863812.1| copper/silver efflux system outer membrane protein CusC [Shewanella sp. ANA-3] gi|117615060|gb|ABK50513.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. ANA-3] Length = 461 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 107/459 (23%), Positives = 226/459 (49%), Gaps = 31/459 (6%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +L GC ++ PEY +P P+ P QFS+ + + ++ + W F D + +L+ Sbjct: 12 IFILTGCVSLAPEYQRPAAPV-PQQFSLSRNSLMPAVNGYQDTGWRNFFVDPQVTRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDSD-- 123 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALANNRNLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 124 --WKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 LRYELDFFGKLKNL--SDADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 248 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 Y A L + + +P N+ + ++ RPDI E +L + A IG A++ Sbjct: 249 TYRA---LPPEKGMKGGETAPVKLPSNLS--SQILLQRPDIMEAEYQLKAADANIGAARA 303 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS++L ++ + + F + W+F PK+ +P+F+ G+ K+N++ AE Q+ Sbjct: 304 AFFPSITLTSGLSASSTELSSLFTPGSGMWNFIPKIDIPVFNAGRNKANLKLAEIRQQQS 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++ + +A K+V + + + + Q ++ + ++ + Y G S +++ Sbjct: 364 VVNYEQKIQSAFKDVSDTFALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEV 423 Query: 415 LDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 424 LDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|167645912|ref|YP_001683575.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167348342|gb|ABZ71077.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 495 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 211/457 (46%), Gaps = 29/457 (6%) Query: 10 LFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LF V +LAGC PL Q G + +I + W + F + L L++ Sbjct: 26 LFAVSLILAGCAS--TSPFSPPPLPTPQTFPGQPQAKGSIGAVGWRDFFQEPPLRGLIET 83 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-----NLKTNSTGQ- 119 AL N + A R++ A+ + A L+PS A+ + P + + G+ Sbjct: 84 ALANNRDVRIAAARLDEARAALRIESAALYPSLDGVATSTRGRTPADLSITGRAETGGEY 143 Query: 120 ---LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKE 172 L + W+ID +G+ R S A L Y D A+ V + LI Y+ R ++E Sbjct: 144 RSVLSAGWEIDFWGRLRA--SRQAALQQ-YLATDEARRAVATSLIAQVAGGYLLEREYEE 200 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI++A + + ++++ + ++ GA SKL + + + + + + L++ +N H Sbjct: 201 RIALARRTVASREESLRILRRRYEVGAGSKLEMTQAQTLLAQARTAVEALDQDQAVNRHA 260 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L+G P + Q + P+ P+ G+ ++L+ NRPD+ E +L + A I Sbjct: 261 LAVLVGRPVE--MASGPLQLSEVGPDQ--PLPAGLASELLVNRPDVIAAEHRLRAAGANI 316 Query: 293 GIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ +P+++L G+ + D F G + WSF P L LPIFD G+ +N+ + + Sbjct: 317 AAARAAFFPNITLTAGGGTASAQLDGLFKGGSQAWSFTPSLDLPIFDGGRRDANLDLSLA 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ TV +A ++V +AL + + + + ++ L+ + + GR Sbjct: 377 RRDIAVADYERTVQSAFRDVADALVQRRQLAARIADARDMLAALQERARLADLRFANGRS 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + L++ D +R + E L +R S V LY A+ Sbjct: 437 TYLEVQDAQRDLFETEQALVQLRRGYLASGVALYAAL 473 >gi|26989538|ref|NP_744963.1| outer membrane protein OprJ [Pseudomonas putida KT2440] gi|24984413|gb|AAN68427.1|AE016475_6 outer membrane protein OprJ [Pseudomonas putida KT2440] Length = 468 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 207/459 (45%), Gaps = 24/459 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 + + LAGC++ P Y +P P+ ++ +++ L W D L +LV AL Sbjct: 12 VLALTLAGCSLTPTYQRPEAPV-AAEWGDAAGHTGHSVEQLDWQAFIVDPVLRQLVGTAL 70 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNL-------KTNSTGQL 120 N ++ Q I A+ RAD P AS S + +P +ST Q+ Sbjct: 71 DNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSSTYQV 130 Query: 121 D---SDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHFKERI 174 ++++DLFG+ + + S A L+ A ++ A++ +I+++ +Y+ + R Sbjct: 131 GLSLPEYEVDLFGRVKSL--SDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERRQ 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ Q L + ++ L + G + L + ++ +++ + R + + Sbjct: 189 ALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNALV 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + E M + + +P + I G P+ LI RPDI E +L A IG Sbjct: 249 LLLG--SAEAAKAMPAERPD-EPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIGA 305 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL GS F G + W+F P+L LP+FD G+ ++ + AE+ Sbjct: 306 ARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARK 365 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ + A +EV +AL + + ++ + + +++++L+ Y G + Sbjct: 366 DSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDNH 425 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L LD +R + E A Q + V+L+ A+G G+ Sbjct: 426 LRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464 >gi|237510524|ref|ZP_04523239.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346] gi|235002729|gb|EEP52153.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346] Length = 494 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGVARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALIAGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMR 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDAQRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|149928418|ref|ZP_01916656.1| hypothetical protein LMED105_10835 [Limnobacter sp. MED105] gi|149822870|gb|EDM82118.1| hypothetical protein LMED105_10835 [Limnobacter sp. MED105] Length = 470 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 106/456 (23%), Positives = 215/456 (47%), Gaps = 30/456 (6%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIALQQ 71 CT + P + ++F K L++ + ++ WW F+ LN L++ A Sbjct: 18 GACTT----VESRKPEIDSRFENATFKPLVSPNAVQAPADWWTGFSSEQLNTLMQKAQAD 73 Query: 72 NLTILQATE-RINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLDS- 122 NL+ L+ATE R+ AA+ ++ + +A FPS ++ I TN+ G S Sbjct: 74 NLS-LEATEARLRAAQASLDAAQASFFPSLTLNAGRQENTVKGTSIQGQATNNRGLFTSA 132 Query: 123 ----DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++IDL+ + R+ ++S L + ++D A++++ +L ++ + + + Sbjct: 133 SFVASYEIDLWSRVRNTAKASELQLQATRYELDAARISIAGQLATTWAQWVAADQTVRLF 192 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L+ ++ N++L L+F QG +++ ++S + ++ + + + +++++ L+ Sbjct: 193 ETELESFQTNLKLVELRFRQGGAVASDVLQQRQLVESAQGNLAQAQANRDVLLNSLALLV 252 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + + N P L G PA+L+ RPD++ ++ + + A + Sbjct: 253 GQPP----NTISMNRENL-PTLPPVPATGFPAELLNRRPDVQQAWAQVLATDHSVAAAIA 307 Query: 298 DLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 + +P LSL S + T D+ N + L P+FD G + + R + + Sbjct: 308 NRFPQLSLRASFSDQTRDSDLLFDNWVRNLSVNLVAPLFDGGARSAEVERQRALLDQAVA 367 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +Q+ +NA+ +V+NAL ++ V Q +EL + S+ YR G L ILD Sbjct: 368 QYQDAAINALADVDNALIQETRQREAVESFQRQLELAELSLKRLFAGYRNGTVDYLAILD 427 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +++T+++ +L A++QL + LY A+ SG P Sbjct: 428 AQQSTSQLRRNLVNAQQQLVGFRIALYRAL-SGSIP 462 >gi|33596389|ref|NP_884032.1| putative efflux system outer membrane component [Bordetella parapertussis 12822] gi|33602322|ref|NP_889882.1| putative efflux system outer membrane component [Bordetella bronchiseptica RB50] gi|33566158|emb|CAE37062.1| putative efflux system outer membrane component [Bordetella parapertussis] gi|33576761|emb|CAE33839.1| putative efflux system outer membrane component [Bordetella bronchiseptica RB50] Length = 499 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 118/492 (23%), Positives = 222/492 (45%), Gaps = 55/492 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL---LPTQ-----------FSIGNS-------KNL 44 A+ L LAGC++ P+Y +P P+ P Q S+G + Sbjct: 10 ALSVLVAAALAGCSLAPDYKRPEAPVQANWPDQPKVQYGAYASPTSLGEQPAAAVAPQGA 69 Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 D + W E F D L KL+++AL N + A +R+ A+ R +PS A I Sbjct: 70 TPADEIGWREFFRDARLQKLIELALVNNRDLRVAVQRVEEARAQYGVQRGAQWPSIGAGI 129 Query: 105 SHR---FIPNLK------TNSTGQLDSD-----WKIDLFGQRRHIESSLAN--LDSAYAQ 148 + P+++ T+ + Q + ++IDLFG+ R++ + L + AQ Sbjct: 130 QGQRQHLPPDMRPLGPDSTSISSQYQAGLGLTTFEIDLFGRLRNLSEAAYQQYLSTEQAQ 189 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + + ++ + SY + R + ++ + + L +++ L +F G S+L L + Sbjct: 190 RSV-HITLVGAVAQSYFNLRAAEVQLELTQKTLASRQESYNLVKTRFDGGVASELDLNQS 248 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 ++ + S +D+ L ++ + + L+G P + + + L + G+P Sbjct: 249 KSLLDSASADLAALARARAQAANALVVLVGLPG--LPEDLPAPAVFGRDQLLASVPAGLP 306 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ RPDI E +L + A IG A++ +P++SL G + + DN F G +WS Sbjct: 307 SDLLTRRPDILAAENQLKAANANIGAARAAFFPTISLTGLLGVASPSLDNLFKGGQGYWS 366 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 F P + P+F G I+ + A++ +++++ A +EV +AL Sbjct: 367 FSPSITTPLFAGGSIREGLNLAKARDNIAVAQYEQSIQQAFREVSDALAG-EATYSAQLD 425 Query: 386 LQHAVELHK-KSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK--SY 439 Q A+++ +++ LS + Y G S L + TA+V+ L + + LA + Sbjct: 426 AQRALQVAAGRTLELSNLRYNNGIDSYLQV-----QTAQVDFFNAQLGLVQTGLAALINR 480 Query: 440 VDLYIAIGSGYN 451 V+LY A+G G+ Sbjct: 481 VELYKALGGGWQ 492 >gi|307726906|ref|YP_003910119.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307587431|gb|ADN60828.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 469 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 125/475 (26%), Positives = 220/475 (46%), Gaps = 43/475 (9%) Query: 1 MNILRAIFSLFI---VLLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWE 54 M +LR + + I VL A V P+Y +P P T +S N + T++ WW+ Sbjct: 1 MAMLRGLCAATIGAAVLCACVDVSMPDYKRPDTPG-KTSWSGQNGTPVSAAATIEPDWWK 59 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F+D +L+ L+ A+ N I RI+ A+ I RA P+ F Sbjct: 60 GFSDPTLDALIARAISGNFDIKVLAARIDVARTQIGEARAGALPTMDLGGGASF-----Q 114 Query: 115 NSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +TGQ +W ID++G+ + +++ A ++ A L ++S + +Y Sbjct: 115 KTTGQTFAKQYNVATQVNWDIDIWGKVEKGVQAQKAEFRASEADWRAGYLELVSNVSSTY 174 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 F ++I + L ++ + + + G + +++ +AEI + + + L + Sbjct: 175 FQILQFDDQIDQQQKTLVTNRQILSIYEGQRRSGLIPQTLVLRQQAEINRLTNQLLELGR 234 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 S + + + TL+G PA EF + + Q + +P + G+PA L+ RPD+ E Sbjct: 235 SRDLANNALCTLIGVPAGEF----RLPKGHLQQRVRLPGVPDGLPAQLLARRPDVVAAEF 290 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDK 337 ++ ++ +G AK PS+SL G S ALT SF + F P + +P+ D Sbjct: 291 RVLEAYDLVGQAKLAQLPSISLTGHGGTASFALTDLLKSF-----TYGFMPSINIPLLDP 345 Query: 338 G-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + + +A+S+ EQ ++ TV+ A +EVENAL ++N K +LQ V+ + Sbjct: 346 GVRAHVKVTQAQSTVAEQ--QYRATVMGAFEEVENALVNLNAHKAQRIELQQQVDRLQIV 403 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-YVDLYIAIGSGY 450 R G S L++ + ER + ++ L +A QL S V LY A+G G+ Sbjct: 404 ADQIQSQLRLGVVSQLEVFETERTLLEAQLSL-LANHQLILSDTVLLYKALGGGW 457 >gi|189423466|ref|YP_001950643.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] gi|189419725|gb|ACD94123.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] Length = 464 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 108/463 (23%), Positives = 217/463 (46%), Gaps = 23/463 (4%) Query: 1 MNILRAIFSLFI----VLLAGCTV---GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWW 53 M IL + F+ LAGC+ +YT+P + L P Q+ +WW Sbjct: 1 MKILSIVTYAFVLPICCFLAGCSGLLPRSQYTRPEVTL-PRQWQATGVTGSAVATKRQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 +ND +L++L+++AL+ N + AT ++ A+ + +L P+ A +S +L Sbjct: 60 RDYNDQTLSELIELALRSNNNLAAATIKVKRAQLSARLTNTNLTPTVSADLSSSLSRDLT 119 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 T +S L + +++DL+G+ ++S ++ L ++ + +Y Sbjct: 120 TRSETKSSGATLSASYELDLWGKLASARDASKWEAEATEYDRQSTALALVGTVATNYWTI 179 Query: 168 RHFKERI-SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + ERI S+ IL+ ++ + L +K+ GA S L ++ + + S ++ + L + Sbjct: 180 AYLNERIASVDASILNA-ERVLGLVEVKYQAGAVSALDKLQAQQTVASQKAQLTELWQQ- 237 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 R N +L A E H + ++ P +P + G+PA L+ RPD++ E++L Sbjct: 238 RTEARNALAILFNQAPE--HTVPERQR--LPEGALPQVQAGLPASLLGQRPDLQAAEQRL 293 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNI 344 +A + ++ YPS +L G++ + + N + + G L LP ++ ++ Sbjct: 294 KKYLANVDTTRASYYPSFTLTGTLGRSSTSLVEVVKNPYAALGAGLVLPFIQWNTMRLHV 353 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A++ +E + +++T+ A+ +VENAL + + + +LQ +++L KK+ L+ + Y Sbjct: 354 ETAQADYEEAVVNFRQTLYAALSDVENALAARKNYAEELKQLQDSLDLAKKAEQLAEVRY 413 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 G L LD + E ++ + K+ + LY IG Sbjct: 414 LTGSTDLQTWLDTQERRRDAERAFAVVRLAQLKNSMALYQVIG 456 >gi|70733665|ref|YP_257305.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68347964|gb|AAY95570.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 482 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 113/455 (24%), Positives = 205/455 (45%), Gaps = 31/455 (6%) Query: 20 VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 VGP+Y P L Q S + + WW + D L++LV+ AL N Sbjct: 22 VGPDYQVPGDAAVQRKDLQGQLSAKGANVVSAPVPADWWRLYQDPRLDQLVQQALASNTD 81 Query: 75 ILQA----------TERINAAKENILSVRAD---LFPSSYASISHRFIPNLKTNSTGQLD 121 + A + AA V+A L S A + +P + + Sbjct: 82 LRVAAANLARARAQVDEAQAAGGWSGGVKAGVERLQESGEAFLLPEKVPVANVGNL-SIS 140 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + ++ DLFG +R IE++ AN D+ A D A++ +++ ++ +Y E IA Sbjct: 141 TSYQFDLFGTLQRGIEAAQANADATQAAADTARITLVADVVRAYTQVCAANEEREIAEHS 200 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L L ++ EL+ G + + + + + KS+ +++P E + + + +S LL P Sbjct: 201 LSLQAQSTELTQRLRDAGRGDETQVTRSQTQFKSLRAELPRYEAARQSGLFRLSMLLAKP 260 Query: 241 ATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 L + +++ P++ + +G A L++ RPD+R E++LA + A+IG+A Sbjct: 261 ----LDQLPAGTDSCAQLPHITQLLPVGDGAALLKRRPDVRQAERQLAAATARIGVATGA 316 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 LYP +S+ G++ + + P N W FGP + + G + I AE+++Q Sbjct: 317 LYPDISIGATVGTVGILDNLGKPSTN-RWGFGPLISWTVPANGA-RERIHEAEAASQGAL 374 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + VLNAI+E + L + + L A + + + + ++ GR S L L Sbjct: 375 AHFDGVVLNAIRETQTGLAQYSAQLQRRDALADAEQSAQLAADQTHRFFQAGRASFLADL 434 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R + L+ A Q+A S +DL++A+G G+ Sbjct: 435 QATRTYTDMRAQLAAANTQVAMSQIDLFLALGGGW 469 >gi|194335297|ref|YP_002017091.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelodictyon phaeoclathratiforme BU-1] gi|194307774|gb|ACF42474.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelodictyon phaeoclathratiforme BU-1] Length = 469 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 107/475 (22%), Positives = 205/475 (43%), Gaps = 45/475 (9%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 L L C++ P Y +P P+ P + S + + W F L L Sbjct: 9 LCLAATTLTACSLAPTYVRPTAPVTKEWPVASAAPQSVEESHTADIGWRSMFRSPKLQSL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFIPNLKTN-- 115 ++ +L N + A I AA+ R+DL PS +S +S KT Sbjct: 69 IEASLANNRDLRIAALNIEAARHTWRIQRSDLLPSINSSGNYTRQQLSTSMSGTGKTEIT 128 Query: 116 ---STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFK 171 S G + +++DLFG+ R + + N A + A+ ++++++ +Y+ Sbjct: 129 STYSAGIGTTAYELDLFGRVRSLSNRAINQYLATEEGRKAAQTSLVAEVANAYLTYLADV 188 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E + + L + +L F GA S+L + + ++S + ++ + + Sbjct: 189 ELLRLTESTLKTRQDACDLIKRSFDLGAKSRLDVAQSATLVESARASRAQYQRHVEQDKN 248 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-----------INIGIPADLIRNRPDIRY 280 ++ L+G P L P + +GIP+ ++ +RPD+R Sbjct: 249 ALTLLVG--------------KEIDPTLLEPQPLADVEVMERLPVGIPSVVLLDRPDVRQ 294 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFD 336 E L A IG A++ +PS+SL GS D G + WSF P++ LPIF Sbjct: 295 AEYALKAENANIGAARASFFPSISLTGSAGFASASLSDLFEAGSSGVWSFAPQVTLPIFQ 354 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+++SN++ AE++ +++ + +A +EV +AL + + + Q V+ ++ Sbjct: 355 GGRLRSNLKLAETNRDIAVTRYEKAIQSAFREVADALVARATYTEQLQAQQALVKESDQA 414 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ Y G S +LD +R+ + + + + +Q + +DLY A+G G+ Sbjct: 415 CTITKARYDHGIDSSFALLDAQRSLFEAQQNEILIHQQTLANLIDLYKALGGGWQ 469 >gi|167647987|ref|YP_001685650.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167350417|gb|ABZ73152.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 467 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 211/457 (46%), Gaps = 31/457 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L+ CT+ P +P + + + + L W E F D L +++++L N Sbjct: 15 LSACTLAPATVRPTLAVDNAWPIASTNAGPVTAADLGWREVFIDPRLQGVIELSLSNNRD 74 Query: 75 ILQATERINAAKENILSVRADLFP------------SSYASISHRFIPNLKTNSTGQLDS 122 + A I A+ RA L P +S A +++T + G + Sbjct: 75 LRVAVLNIEKARAQYRVQRAALVPGVDATATGTKGETSTAQTQPGASRDVETYTAGVGVT 134 Query: 123 DWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++D+FG+ R + +S LA +++ A ++++I++ +++ ++ +++A Sbjct: 135 SYELDIFGRVRSLKDAALQSYLATRETSRA----VQISLIAQTANAWLALAADQDLLALA 190 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L ++++ L+ +F GA ++L L + E ++ SD+ T + + + ++ Sbjct: 191 RDTLSTREESLRLTRSRFDAGAANQLDLRQAETLAETARSDVATYIAQVEQDKNALRLVV 250 Query: 238 G--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G PA + L + P+L G+P+D++ RPD+ E +LA + A IG A Sbjct: 251 GANVPA-DLLPAGGLVTAQILPDL----PAGLPSDVLTRRPDVLAAEHQLAGANANIGAA 305 Query: 296 KSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS++L GS + D+ F G N WSF P++ LPIF G +N+ A++S Sbjct: 306 RAAFFPSITLTGSAGVASDSLGSLFDGGNGTWSFAPRISLPIFAGGANVANLDGAKASRD 365 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 T+++TV A +EV + L + + V + V ++ LS Y G S L Sbjct: 366 IAVATYEKTVQTAFREVADGLAVQSTIQDRVGSQERLVAAANDTVRLSRARYGAGIDSSL 425 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R + L A+ A + LY A+G G Sbjct: 426 TLLDAQRTLYASQQGLIGARLARATNLATLYKALGGG 462 >gi|322419316|ref|YP_004198539.1| NodT family RND efflux system, outer membrane lipoprotein [Geobacter sp. M18] gi|320125703|gb|ADW13263.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M18] Length = 473 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 206/459 (44%), Gaps = 32/459 (6%) Query: 17 GC-TVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GC ++ P+YT+P P+ P+ + G + + + W + F + L KLV +AL Sbjct: 19 GCASMAPKYTQPAAPVPGNWPAGPSYQTAGPTAEQKPLAEIPWQDFFVEPQLQKLVSLAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASIS-HRFIPNLKTNSTGQLD----- 121 N + A ++ + RADL P S A ++ R +L N G + Sbjct: 79 DNNRDLRVALLNMDRYRALYQIKRADLLPQVSGDAGLAVKRTADDLAQNGNGSVSHSYDV 138 Query: 122 ----SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S +++DLFG+ R ++ L + A+ + ++ ++S++ +Y+ ER+ Sbjct: 139 GVGISSYELDLFGRVRSLKDQALEQYLATEQARRSV-QITLVSQVANAYLTLGSDLERLQ 197 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + L +++ +LS +F G S L L + + + S DI +++ + Sbjct: 198 LAKETLANQQESYKLSKSRFDAGVASALDLQQAQTSVDSARVDIARYTTQVAQDLNALVL 257 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIG 293 ++G + L + NL ++ G+P++++ +RPDI E L + A IG Sbjct: 258 VVGSDVPQALL-----PKSLTGNLTALKDVAPGLPSEVLLSRPDILQAEYNLKGANANIG 312 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P ++L S+ D F N W+F P+L +PIF+ G+ K+N+ A Sbjct: 313 AARAAFFPRITLTTSLGFGSDSLTGLFNAGNLAWNFAPRLSVPIFEGGRNKANLEVATVD 372 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++ + A +EV +AL + V Q ++ LS Y+ G S Sbjct: 373 RDIALAQYEKAIQGAFREVADALAQRGTIDEQVAAQQSLTGATAETYRLSQARYQTGVDS 432 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R+ + L + + V LY +G G Sbjct: 433 YLNVLDAQRSLYAAQQALITTRLARLNNMVTLYKVLGGG 471 >gi|217970477|ref|YP_002355711.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|217507804|gb|ACK54815.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 495 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 220/476 (46%), Gaps = 57/476 (11%) Query: 11 FIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 + +L+GC ++ P +P+ + ++ + L W E F D +L L++ AL Sbjct: 37 VLAMLSGCASLAPALDPIALPVASNWRTQPDTPGVAAAADLAWREYFTDPALQALIETAL 96 Query: 70 QQN----LTILQATE-----RINAAKENIL------SVRADLFPSSYASISHRFIPNLKT 114 + N + +L+ E RI A++ + +R L P ++ R + + Sbjct: 97 ENNRDLRVAVLRTEEARAAFRIQRAQQAPMVGVGAQQIRTGL-PDGLQPLAGRSVLEVNV 155 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKER 173 S G S W++DL+G+ R ++++ A Q A +L +++++ +Y+ R ER Sbjct: 156 ASVG--ISSWELDLWGRVRSMKTAALEQWLATEQGHRAVELALVAQVADAYLGLRELDER 213 Query: 174 ISIAHQILD-------LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 I++A + ++ +++K +EL H S+L L ++ + ++ LE Sbjct: 214 IALARRTVENQQELERIFQKRLELGH-------GSRLELTQVRTLLSQGKALQVQLELQR 266 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 ++++ LLG + S L +P + G+P+DL+ NRPDI E L Sbjct: 267 EQQRNSLALLLGSDP-----QLPPPSAPMDEALVMPELRPGLPSDLLANRPDILAAEHAL 321 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 A IG A++ +P ++L GS++ + + F W F P + LPIFD G ++ Sbjct: 322 RARQANIGAARAAFFPRIALTGGAGSVSTSLSDLFSSGTRAWLFQPTIELPIFDAGMRQA 381 Query: 343 N-----IRRAESSAQEQYITWQETVLNAIKEVENALTSINE--DKKIVTKLQHAVELHKK 395 N +RR + A+ ++ + A ++V +AL + + ++ +V + HA + + Sbjct: 382 NLDVSVVRRDIAIAE-----YERAIQAAFRDVSDALAARQKLTEQLVVARQAHAEQSER- 435 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ + + G + L++LD ER VE L +R S + LY A+G N Sbjct: 436 -LKLARMLFDAGSAAHLEVLDAERDLLAVEQQLVQVRRAALSSQIGLYAALGGDTN 490 >gi|295136195|ref|YP_003586871.1| outer hypothetical protein [Zunongwangia profunda SM-A87] gi|294984210|gb|ADF54675.1| outer membrane protein [Zunongwangia profunda SM-A87] Length = 485 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 202/418 (48%), Gaps = 23/418 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--- 107 +WW +F D L+ L++ A NL I A A++ ++ + + D +P + S+ Sbjct: 53 RWWSAFKDPVLDTLIERARTNNLDINTAVANFEASRASLKARKFDRWPVVTMNGSYNRTR 112 Query: 108 -----FIPNLK-TNST--GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 F+P + T ST G +D+ W+ D+FG+ ++ S A A + L + + Sbjct: 113 LGENVFVPGMNPTYSTYSGSMDAVWETDIFGRVSNRVKGSYAYNQQMLADMHGVYLRIFA 172 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK-LSLVKLEAEIKSIES 217 ++ +Y+ R + + IA + L + +L+ LK + TS L + + A+++S + Sbjct: 173 EVATNYLQLRGTQYLLDIAQRNLKGQQDTYDLT-LKLSDAGTSNTLDVSRALAQLESTRA 231 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 IP LE +++S L G P + KQ+ P+L +++G +L+R RP Sbjct: 232 SIPRLEARIEALKNSLSILTGEIPGKLSGDIIGKQA---LPDLPASVHLGNVKELLRRRP 288 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYL 332 D+R E L ++ IA +DLYP + GS+ + + F + + WS P + Sbjct: 289 DVRRAEAVLQVKISAYNIAVADLYPKIEFGGSVGFSAVD-FANFGSKESFTWSLLPSISW 347 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 F+ G++K IR+ ++ +++ VL +++E++ ++++ + + K L+++ Sbjct: 348 AAFNLGRVKQQIRKNDAETLAALAQYEKVVLESLEEIKTSMSNYSHELKRREILKNSSMA 407 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K+ ++ + G + +D L + A E L++++ A S + +Y A+G G+ Sbjct: 408 SAKAAEIAQKRFNAGLDNFIDYLSADNALLIAENSLAMSEISSATSLIAIYKALGGGW 465 >gi|332526594|ref|ZP_08402702.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] gi|332110858|gb|EGJ11035.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] Length = 488 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 100/455 (21%), Positives = 199/455 (43%), Gaps = 26/455 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNLT 74 GCT+GP+Y +P + L + L WW F D +L+ LV+ L N Sbjct: 24 GCTLGPDYRRPALDLPAHHAAAAPEPAPAARQALDTAWWSGFADPALDTLVQDVLANNPD 83 Query: 75 ILQATERINAAKENILSVRADLFPS-------SYASIS-HRFIP------NLKTNSTGQL 120 + A R+ + RA P + ++S +R +P + N T Sbjct: 84 LRIAAHRVEQLDAFLQVSRAAGQPQVGYEGQRTRDTLSENRQVPLSRGTEPVDNNYTVSG 143 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W++DL+G+ RR E++ ANL + ++ +++K Y+ + + + Sbjct: 144 SIRWELDLWGKLRRADEAAFANLMAGQEGRRALEMAMVAKAASGYLRLLSMDRELELLRR 203 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + + L+ +F G +S+L ++ ++ + +++P E + + + L G Sbjct: 204 SVQVEADTLALAQSRFANGGSSELPVLHARSQWQQRAAEVPAKEAEIQALENALGALAGR 263 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P+ G+PA+LI RPD+R +E+ L + A+IG+A++ Sbjct: 264 NPGPLAR------GTLDALKLPPVPAGLPAELIAQRPDLREREQVLVAANARIGVAEAQF 317 Query: 300 YPSLSLNGS--IALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP++ L S A +++ SFG + P+F G++ +R AE+ ++ + Sbjct: 318 YPTIGLTSSSGFASAELGRLDELRSNFGSFGLHFFGPVFSGGRLGGQVREAEALQRQAAV 377 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 + +V A+ EV++AL + + + V + ++ +++ + GR +L+ Sbjct: 378 DFVRSVQVALHEVQDALVARQKIELQAGLRDDNVAVLERQRQVALRRWELGRDDYFQVLE 437 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ERA A + + A + V LY A+G G++ Sbjct: 438 AERALASGLQLQNQTRHARADALVALYKALGGGWS 472 >gi|326575183|gb|EGE25111.1| RND system membrane channel OprM [Moraxella catarrhalis CO72] Length = 503 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 34/471 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDT-----------LKWWES 55 S + +A C+ P+ P+L + + + + DT L+W E Sbjct: 12 LSALAIGMAACSSIPKKIDTSAPILAVPNVPMKDGYQVYDADTISVAQAPSVASLRWQEF 71 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFI 109 + D L L+++ALQ N + A + +A+ A P ++ S +R Sbjct: 72 YTDPKLAALIELALQNNKDLQSAVLAVQSARAQYQITEAGSVPQVGSNTSVTRQANNRID 131 Query: 110 PNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 N TN G S +++DL+G+ + +L + A D ++++IS + Y++ Sbjct: 132 ANASTNYHVGLAMSGYELDLWGKVASQKQQALHQYLATNAAKDAVQISIISSVAQGYVNL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 H + +A Q L + + ++ +F G SK ++ + ++S + + S Sbjct: 192 AHALAQRQLAEQTLKTREHAMMITQKRFEAGIDSKSPSLQAASSLESARLAVYAADTSIL 251 Query: 228 MNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G P E L + + + G+P++L+ RPDI E +L Sbjct: 252 KAKNALQLLIGRPVPNELLPAIDASMHMGHITTQTLFSAGLPSELLYYRPDIMQAEHRLK 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A I +A++ +PS+ L+ ++ + + N F WSFGP + LPIFD G ++N Sbjct: 312 AAGANINVARAAYFPSIRLSSNVGFSSNSLNNLFESSALGWSFGPAISLPIFDAGSRRAN 371 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLS 400 A+ + Q + +++ + NA KEV + L E + +L + L ++++ ++ Sbjct: 372 HEMAQVAQQSALVDYEKAIQNAFKEVSDVLA---ERATLGLRLDAQIRLQDNYRQTYDIA 428 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +R G + L +LD ER+ + + I + +LAK S + LY A+G G Sbjct: 429 YARFRSGLDNYLTVLDAERSLFINQQN--ILQLELAKLVSQIQLYQALGGG 477 >gi|262374202|ref|ZP_06067478.1| outer membrane protein oprM [Acinetobacter junii SH205] gi|262310760|gb|EEY91848.1| outer membrane protein oprM [Acinetobacter junii SH205] Length = 466 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 212/454 (46%), Gaps = 34/454 (7%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQQ 71 LAGC+ V Y P + + P QF KN +N+ +WW FND LN+LV+ L + Sbjct: 18 LAGCSAVVKTPYNSPSVQV-PQQFQYDVQKNKNVNLSD-QWWTLFNDAQLNQLVEQVLAK 75 Query: 72 N-------LTILQATERINAA-KENILSVRADLFPSSYASISHRFIPNLKT-NSTGQ--- 119 N +T+ QA R+ A EN R SS S H + +L++ N T + Sbjct: 76 NSDLIVAGITLKQA--RLQAGLAENQQGFRT----SSSVSTGHNY--DLRSGNGTDRGLS 127 Query: 120 --LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + +++DLFG+ E+S ++ + ++++ Y + ER + Sbjct: 128 TSVGVSYELDLFGKLANQTEASRWEALASAQDLQATAQSLVATTAKLYWQLGYLNERYNT 187 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q L +K EL ++ GA S L L + E ++S ++ + +E+ I+ L Sbjct: 188 IQQNLASTQKIYELVQSQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQRVETRTAIAVL 247 Query: 237 LGYPATEFLHYMQKQ-SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L P + KQ N PN I +G+PAD++ RPD++ E +L ++A Sbjct: 248 LHMPVQQLSIQEPKQLPRNALPN----IAVGLPADILSRRPDLQASELRLRKTLATKDAT 303 Query: 296 KSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 K+ YPS++L G++ + + + N + G L LP +K +I ++ ++ Sbjct: 304 KASYYPSINLTGNLGASSTSLTQLLKNPALTLGASLSLPFLQYNDMKKDIAISDLEYEKA 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 I +++T+ A +VENAL++ + + V Q VEL K+ L+ + YR G +L ++ Sbjct: 364 IIQYRQTLYQAFADVENALSNRTQLNQQVQLQQRNVELANKTERLTEVRYRNGAIALKNL 423 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 LD + T + L K+ +YV L A+G Sbjct: 424 LDAQETTRNARLSLVETKQNQYNAYVTLMQALGG 457 >gi|115360727|ref|YP_777864.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115286055|gb|ABI91530.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 497 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 216/474 (45%), Gaps = 35/474 (7%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKN-----LINIDTLK---WWES 55 R + +L +V LA C+ P Y+ P + +PT ++ + D WW Sbjct: 11 RRVVALGVVTALAACSTLPPYSPPTV-AVPTHYAGAPAAQPGWQVAAPADAASRGAWWTV 69 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN- 111 FND LN L N T+ +A + A+ + A P+ A ++ R N Sbjct: 70 FNDADLNALEARVDVSNQTVKKAVADLEQARATVDYQHAGFLPTVTAGVAQSRSRISQNK 129 Query: 112 LKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L ++ G+ D W+ D+FG+ R + + AN D++ A + KL+V ++L Sbjct: 130 LGSSLAGKTTPDHQLGVAASWEPDVFGRVRDAVAGAQANADASAADLQAVKLSVTAELAT 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y R + + + Y ++L + GA ++ + E ++++ + + Sbjct: 190 DYFALRSLDTQKQLLDDTVRAYADALKLLQQQLAAGAIDASAVAQAETQLEATRTQDTDI 249 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + S H I+TL+G A+ F + Q+ + +P I G+P+ L+ RPDI Sbjct: 250 DASRAQLQHAIATLVGENASTFALPPRVQAFD------VPAIPAGVPSQLLERRPDIAAA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKG 338 E+++A + A+IG A++ +P L L+ S L P + WS GP+L +FD G Sbjct: 304 ERRVAAANAQIGEARAAFFPDLVLSASAGLESGFFMPWLTAPSLFWSLGPQLVGTLFDGG 363 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + +R A + + +++TVL A ++VE+ L++++ Q A + S+ Sbjct: 364 RRSATLRGAHAQYDGEVADYRQTVLGAFQQVEDQLSALDALASEAASQQRATDAADLSLR 423 Query: 399 LSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + G S LD++ + A + IA R++ ++ V L A+G G++ Sbjct: 424 LTTNRFNAGAVSYLDVVTAQTIALTNRRLADQIAARRM-EAAVGLLKALGGGWH 476 >gi|300916217|ref|ZP_07132967.1| putative outer membrane efflux protein OprM [Escherichia coli MS 115-1] gi|300416453|gb|EFJ99763.1| putative outer membrane efflux protein OprM [Escherichia coli MS 115-1] Length = 461 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 224/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 12 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 131 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 191 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 250 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 251 RAVPSEKGIKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 302 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 303 AAFFPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 363 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 422 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 423 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|293610311|ref|ZP_06692612.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827543|gb|EFF85907.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 468 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 19/447 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKN-LINIDTL--KWWESFNDTSLNKLVKIAL 69 L GC V Y P + + P F +K ++ D +WW FND LN+LV L Sbjct: 18 LVGCAAVVKTPYETPAVQV-PGSFQYDTAKTKTMSADQYSDRWWTLFNDAQLNQLVNNVL 76 Query: 70 QQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD---- 123 ++N L + T + + ++ + + L SS S H F N +S L Sbjct: 77 ERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSMSAGVS 136 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R E+S + + ++I+ Y + ER + A Q L Sbjct: 137 YELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYTTAQQSLA 196 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K +L +++ GA S + L + E ++S ++ + +E+ I+ LL P Sbjct: 197 TSQKLYDLVQIQYKAGAVSGVDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLLHEP-- 254 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 L + Q P +P I G+PAD++ RPD++ E +L ++A K+ YP Sbjct: 255 --LQQLNIQEPKRLPRTALPAIGAGLPADILSRRPDLQASELRLRKALATKDATKASYYP 312 Query: 302 SLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S+SL S+ + + N + G L LP +K +I + ++ I +++ Sbjct: 313 SISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAIIQYRQ 372 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +LD ++ Sbjct: 373 TLYQAFADVENALSSRTELNKQVALQERNVELAEKTERLTEVRYRYGAVALKTLLDAQQT 432 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 T + L K+ +YV L A+G Sbjct: 433 TRTARLSLVETKQSQYNAYVTLMQALG 459 >gi|326563950|gb|EGE14200.1| RND system membrane channel OprM [Moraxella catarrhalis 12P80B1] gi|326569857|gb|EGE19907.1| RND system membrane channel OprM [Moraxella catarrhalis BC8] Length = 507 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 110/471 (23%), Positives = 212/471 (45%), Gaps = 34/471 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDT-----------LKWWES 55 S + +A C+ P+ P+L + + + + DT L+W E Sbjct: 12 LSALAIGMAACSSIPKKIDTSAPILAVPNVPMKDGYQVYDADTISVAQAPSVASLRWQEF 71 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFI 109 + D L L+++ALQ N + A + +A+ A P ++ S +R Sbjct: 72 YTDPKLAALIELALQNNKDLQSAVLAVQSARAQYQITEAGSVPQVGSNTSVTRQANNRID 131 Query: 110 PNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 N TN G S +++DL+G+ + +L + A D ++++IS + Y++ Sbjct: 132 ANASTNYHVGLAMSGYELDLWGKVASQKQQALHQYLATNAAKDAVQISIISSVAQGYVNL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 H + +A Q L + + ++ +F G SK ++ + ++S + + S Sbjct: 192 AHALAQRQLAEQTLKTREHAMMITQKRFEAGIDSKSPSLQAASSLESARLAVYAADTSIL 251 Query: 228 MNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G P E L + + + G+P++L+ RPDI E +L Sbjct: 252 KAKNALQLLIGRPVPNELLPAIDASMHMGHITTQTLFSAGLPSELLYYRPDIMQAEHRLK 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A I +A++ +PS+ L+ ++ + + N F WSFGP + LPIFD G ++N Sbjct: 312 AAGANINVARAAYFPSIRLSSNVGFSSNSLNNLFESSALGWSFGPAISLPIFDAGSRRAN 371 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLS 400 A+ + Q + +++ + NA KEV + L E + +L + L ++++ ++ Sbjct: 372 HEMAQVAQQSALVDYEKAIQNAFKEVSDVLA---ERATLGLRLDAQIRLQDNYRQTYDIA 428 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +R G + L +LD ER+ + + I + +LAK S + LY A+G G Sbjct: 429 YARFRSGLDNYLTVLDAERSLFINQQN--ILQLELAKLVSQIQLYQALGGG 477 >gi|319763075|ref|YP_004127012.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|330825154|ref|YP_004388457.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|317117636|gb|ADV00125.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] gi|329310526|gb|AEB84941.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 502 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 106/446 (23%), Positives = 197/446 (44%), Gaps = 45/446 (10%) Query: 18 CT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT-------------LKWWESFNDTSLNK 63 CT + P+Y P +P+ PT + D L W + + L + Sbjct: 17 CTSLAPDYQAPALPVPPTMGAAQPPIAAQAPDPAHEATLHVTEAGPLPWSDFVQEPRLRE 76 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT----NS 116 +V +AL N + A I A+ R+ LFP+ + A R +L T N+ Sbjct: 77 VVALALAHNRDLRMAALAIERARAQYGIERSALFPAVNATGAGARSRTADDLTTAGRPNT 136 Query: 117 TGQLD-----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 TGQ S +++D FG+ R + +++L +L+++++++ +++ Sbjct: 137 TGQYSAQLGFSSYELDFFGRVRSLNDAALQEFFRVAENRRSVQLSLVAEVMNAWLMLDAD 196 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 R+ +A + L ++ ++L+ F GATS L+L + + + D + Sbjct: 197 ARRLQLARETLRTRQQALDLTRRSFELGATSALALAQAQTSADTARVDAAAFASQVARDR 256 Query: 231 HNISTLLG-------YPAT--EFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPD 277 + ++ L G PA+ L K P +G+ ADL + +RPD Sbjct: 257 NVLALLAGTSVPDALLPASVASVLPGAGKVPELLPPPAPATALLGVAADLPSSVLLHRPD 316 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLP 333 +R E L S A IG A++ +PS++L S+ T N+ G N W+F P++ LP Sbjct: 317 LRAAEHALRGSYASIGAARAAFFPSITLTASVG-TASNALSGLFGAGNGTWTFAPQIRLP 375 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ ++N+R AE + +++ + A +EV + L + + + V+ Sbjct: 376 IFDAGRNQANLRVAEVARDTALAQYEKAIQTAFREVADTLAERATLDERLDAQRSLVQAS 435 Query: 394 KKSMSLSMINYRQGRYSLLDILDIER 419 ++++ LS +R G + L +LD +R Sbjct: 436 QRALELSDARFRLGADNYLAVLDAQR 461 >gi|237720505|ref|ZP_04550986.1| outer membrane protein oprM [Bacteroides sp. 2_2_4] gi|229450256|gb|EEO56047.1| outer membrane protein oprM [Bacteroides sp. 2_2_4] Length = 463 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 116/462 (25%), Positives = 203/462 (43%), Gaps = 39/462 (8%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 13 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTANFGN---LPWREVFTDPQLQS 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-Q 119 L++ L+QN +L A + + AA+ +++S R PS S F N T + Sbjct: 70 LIETGLKQNTDLLSAAQNVKAAEASLMSARLAYAPSLGLSPQGTISSFDKNAATKTYSLP 129 Query: 120 LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W+IDLFGQ +R+ + +L + AY Q + V+S + Y ++ Sbjct: 130 VTASWQIDLFGQLLNSKRNAQVTLKQMK-AYRQA--VQTQVVSNIANMYYTLMMLDRQLE 186 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNVHN 232 I ++ KKN E A ++ +E A + + IP +E+S R + Sbjct: 187 ITKATAEILKKNAETME-AMKNSAMYNINSAGVEQSKAAYAQVLATIPDIEQSIRETENA 245 Query: 233 ISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +ST LG H ++ Q L ++ GIP L+ NRPD++ E LA Sbjct: 246 LSTFLGEAPHAIKHGVLETQV------LPTELSAGIPIQLLSNRPDVKAAEMSLASCYYN 299 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YP ++L+GS T+ PG + G L P+F +G+ + ++ A Sbjct: 300 TNSARASFYPQITLSGSAGWTNSAGSAIINPGKLLASAIG-SLTQPLFYRGQNIARLKAA 358 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ ++ +++Q+ +LNA EV NAL+ + + V Q VE KK+ + + G Sbjct: 359 KAQEEQAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRQMQVESAKKASEDTKELFNLG 418 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L ++A ++ ++ V LY A+G G Sbjct: 419 TSTYLEVLSAQQAYLSAQISQVSDCFDRMQAVVSLYQALGGG 460 >gi|167922711|ref|ZP_02509802.1| outer membrane efflux protein OprB [Burkholderia pseudomallei BCC215] Length = 469 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 101/423 (23%), Positives = 194/423 (45%), Gaps = 32/423 (7%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------- 99 + W E F D L +L++IAL+ N + + + A++ RA LFP+ Sbjct: 21 IGWREFFVDPRLQRLIEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQ 80 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + A +S P + + + W++DLFG+ + + + +LA + A+++++ Sbjct: 81 RTPAGVSITGQPLISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLV 140 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + Y+ + + + L + + +L+ L+F G S+L L + + +++ + Sbjct: 141 ASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALA 200 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ + L+G P + L N Q NL I G+P+DL+ RPD Sbjct: 201 SQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPD 257 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 I E+ L + A IG A++ +P +SL G+ + T F WSF P + LPI Sbjct: 258 IMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPI 317 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 318 FEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQ 377 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIG 447 + LS + YR G S L +L + DL A++QL + VDLY A+G Sbjct: 378 RRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALG 430 Query: 448 SGY 450 G+ Sbjct: 431 GGW 433 >gi|120610720|ref|YP_970398.1| RND efflux system outer membrane lipoprotein [Acidovorax citrulli AAC00-1] gi|120589184|gb|ABM32624.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax citrulli AAC00-1] Length = 511 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 105/466 (22%), Positives = 196/466 (42%), Gaps = 48/466 (10%) Query: 18 CTVGPEYTKPHMPL-LPTQFSIGNS-----KNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 C+V P Y P + +PT F + D WW F D LN+L Sbjct: 42 CSVAPAYQPPALATPMPTAFKEAGALWQPAAPADAADRGDWWTLFGDEELNRLAARVQVS 101 Query: 72 NLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTGQ----------L 120 N I A A+ + RA L P S ++ R + G L Sbjct: 102 NQNIAAAVAAYAQAQALVREQRAGLLPGVSLSAGETRAGGETRAGGEGSARRGTTAQAAL 161 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W D++G+ ++S+ AN ++ A + A+L+ + L+ +Y R + Sbjct: 162 GASWAPDVWGRLGSAVDSARANAQASEADLAAARLSAVGSLVAAYFQLREADAEAGLLRD 221 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y++ + ++ ++ G ++ +++ ++ + +D+ T +++ H I+ L G Sbjct: 222 TVQAYERALRIARNRYDAGVAAQSDVLQARTQLANARADLATAQRNRAGYEHAIAVLAGQ 281 Query: 240 PATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 P F + ++ + G+P+ L+ RPDI E+ +A + A+IG+ Sbjct: 282 PPAAF---------SLPAGTWVARVPEVPAGLPSTLLERRPDIAAAERAVAAANAQIGVQ 332 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +S YPS SL S+ + + F WS G +FD G I + + +A ++ Sbjct: 333 RSAYYPSFSLTASLGRSGTGLGDLFSASGALWSLGLSAAQTVFDGGAIAARVEQARAARD 392 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +++TVL A + VE+ LT++ + Q AV +++ + YR G+ Sbjct: 393 ARVANYRQTVLGAFQAVEDQLTAVRTLQAQEPLRQEAVSAAQRAEEQMLNRYRAGQVGYT 452 Query: 413 DI-------LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D+ L RA +++V+ RQLA L A+G G+ Sbjct: 453 DVVTAQVAALSARRALLQLQVN-----RQLA--VASLVQALGGGWQ 491 >gi|329960499|ref|ZP_08298887.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|328532729|gb|EGF59516.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 457 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 112/457 (24%), Positives = 208/457 (45%), Gaps = 27/457 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN------LINIDTLKWWESFNDTSLNK 63 L + ++ C + Y +P LPT ++ N + + L W E F DT L Sbjct: 9 LCMAAMSSCHIYRNYQRPEG--LPTDSLYRDTANGPSEEDSLTLGDLPWQEMFRDTLLQD 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP--NLKTNSTGQL- 120 L++ L+ N + A R++ AK + + R PS S KT T +L Sbjct: 67 LIRYGLENNTDMQTALLRVDQAKAQLKAARLSFLPSLALSPQGTLTGTDGSKTVKTYELP 126 Query: 121 -DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W+IDLFG R+ + S A L A + ++I+ + Y ++ I+ Sbjct: 127 IQASWEIDLFGNLRNAKKGSQATLLQQEAYRQAIRSDLIASIANGYYSLLMLDGQLEISR 186 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L+++K+ I + KF G ++ ++ + A + +E+ L + R + + TLLG Sbjct: 187 ATLEVWKEQIRVMESKFKVGEETENAVSQARASLHELEATHNDLLRQQREVENALCTLLG 246 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A ++ + Q IN G+P L+ RPD+ E LA++ + A+S Sbjct: 247 TTARSI-----ERGSLEQQTFPERINAGLPVRLLSKRPDVVQAEMVLANAYYTVNQARSA 301 Query: 299 LYPSLSLNGSIA----LTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 YP+L+L+G+ L S PG W S L PIF++GK+ SN+R ++ Q Sbjct: 302 FYPNLTLSGNAGWANSLGQVVSNPG---GWILSAVASLTQPIFNRGKLISNLRVSKDEEQ 358 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +++ +L+A +EV +AL + ++ + + + ++++ S YR G + L Sbjct: 359 IALLAYKQALLDAGQEVNDALYATESVQRSLDSHRRQCKELERAVQTSEALYRTGNATYL 418 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L ++ ++ + +S ++LY A+G G Sbjct: 419 ELLTARQSLLNARLNAVSDRFTYCQSIINLYNALGGG 455 >gi|17549335|ref|NP_522675.1| putative outer-membrane drug efflux protein [Ralstonia solanacearum GMI1000] gi|17431587|emb|CAD18265.1| putative outer-membrane drug efflux protein [Ralstonia solanacearum GMI1000] Length = 508 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 56/474 (11%) Query: 22 PEYTKPHMPLLPTQF---SIGNSKNLINIDTLK-------------WWESFNDTSLNKLV 65 P Y KP + PT F + G L + K WW+ FND +L+ L Sbjct: 35 PTYEKPDVG-TPTAFKEAAQGADAPLAAGEQGKWKTAEPSMPTDGAWWKLFNDATLDSLE 93 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIP-----N 111 A + + T+ A R++ A+ + S RA LFP AS + +P Sbjct: 94 AQAGEASPTLAAAAARVSQARAIVQSNRAALFPELDAGFGPTRQRASAASAGLPVGAPVQ 153 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +T Q ++ DLFG+ R + ++ A+ + A A+L++ + + +Y R Sbjct: 154 PQTYWRAQTTVSYEADLFGRVRNSVNAADADAERVEALYRAARLSLQADVAQTYFSLRTL 213 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ + + ++ ++L +F+ G +L + + +AE+ + SD + + + Sbjct: 214 DAEEALLARTVVGREEALKLVQRRFSTGDIGELDVARADAELATARSDRLDVARRRALLE 273 Query: 231 HNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H ++TLLG + F L Q+ N + + G+P+ L+ RPD+ E+ +A + Sbjct: 274 HALATLLGKAPSGFTLGADPLQAANVR------VPPGLPSALLERRPDVAAAERAMAAAN 327 Query: 290 AKIGIAKSDLYPSLSLNGSIAL-THD--NSFPGYNTHWSFGP----KLYLPIFDKGKIKS 342 A+IG+A++ +P L L G +HD + + W GP L LPIFD G + Sbjct: 328 ARIGVARAAFFPQLQLTGGFGFESHDIGDLLKWSSRTWLLGPLVGTALSLPIFDGGARSA 387 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLS 400 +++A ++ +E ++E VL A +EVE+ L+ + D+ V AV ++ LS Sbjct: 388 GVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQSKVQ--DDAVRASTRAAQLS 445 Query: 401 MINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + LD++D ER +T +V V L+ + + V L A+G G+ Sbjct: 446 RTRYNAGSVNYLDVIDAERNMLSTQRVAVQLAGGR---VNATVGLVKALGGGWG 496 >gi|227498914|ref|ZP_03929054.1| RND efflux system outer membrane lipoprotein [Acidaminococcus sp. D21] gi|226904366|gb|EEH90284.1| RND efflux system outer membrane lipoprotein [Acidaminococcus sp. D21] Length = 471 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 106/429 (24%), Positives = 195/429 (45%), Gaps = 33/429 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL--------------------- 90 WWE F+D +L +L+ +AL+ N + A R++ A+ + Sbjct: 13 WWELFHDDTLTELISLALENNKDLEAARSRLSEARAQVGIAESARLPWINLNGGWMRGNV 72 Query: 91 --SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYA 147 V + P P + G +D+ W++D+FG+ + + ++ L + A Sbjct: 73 PDHVVDGVLPEGPVRDQMGIDPQADGSFAG-IDASWELDVFGRTKAKVRAASDTLQAQNA 131 Query: 148 QVDIAKLNVISKLIPSYIDARHFK-ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 ++ +++ ++L +YI R + ER+ A I ++ +EL + G S + L Sbjct: 132 KLYEVWVSLSAELALNYITLRTLQAERMVTASHIAS-EEETLELLQVNRKSGLLSDVPLQ 190 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINI 265 + E + S S +P L+K + I+ L G P FL + P++ + Sbjct: 191 QSEYTLYSTRSQLPALDKEIAGTLSRIALLTGTIPG--FLDQKLRTPQPL-PDIDARLYG 247 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTH 323 IPADL+R RPDI E+ A +A+ A++ L P S+ G A F + Sbjct: 248 AIPADLLRQRPDIHAAERAWAAQIARTDEARAALKPKFSILGLLGFATLGGGLFSAGSQG 307 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 +S P++ P+F G +K N+ +++ +E+ +++ VL A EV +++ +I ED Sbjct: 308 FSLVPQISYPLFYGGALKKNVAVQKAAEKEKKALYEKMVLKAAGEVRSSMAAIAEDHAAA 367 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 LQ K+ L NY G + LD+LD +RA + + +++K + S + L+ Sbjct: 368 LTLQKGRAASHKAYELVRHNYHSGLGTYLDVLDAQRAYLQADQKYTVSKGKELSSLISLF 427 Query: 444 IAIGSGYNP 452 A+G G+ P Sbjct: 428 KALGGGWGP 436 >gi|167828083|ref|ZP_02459554.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 9] Length = 478 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 101/423 (23%), Positives = 194/423 (45%), Gaps = 32/423 (7%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------- 99 + W E F D L +L++IAL+ N + + + A++ RA LFP+ Sbjct: 30 IGWREFFVDPRLQRLIEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQ 89 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + A +S P + + + W++DLFG+ + + + +LA + A+++++ Sbjct: 90 RTPAGVSITGQPLISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLV 149 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + Y+ + + + L + + +L+ L+F G S+L L + + +++ + Sbjct: 150 ASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALA 209 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ + L+G P + L N Q NL I G+P+DL+ RPD Sbjct: 210 SQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLLTRRPD 266 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 I E+ L + A IG A++ +P +SL G+ + T F WSF P + LPI Sbjct: 267 IMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPI 326 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+ +N+ A + + +++ + +A +EV + L + + + L+ + Sbjct: 327 FEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQ 386 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIG 447 + LS + YR G S L +L + DL A++QL + VDLY A+G Sbjct: 387 RRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVDLYRALG 439 Query: 448 SGY 450 G+ Sbjct: 440 GGW 442 >gi|146291369|ref|YP_001181793.1| copper/silver efflux system outer membrane protein CusC [Shewanella putrefaciens CN-32] gi|145563059|gb|ABP73994.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella putrefaciens CN-32] Length = 461 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 226/459 (49%), Gaps = 31/459 (6%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +L GC ++ PEY +P P+ P QFS+ + ++ + W F D + +L+ Sbjct: 12 IFILTGCVSLAPEYQRPAAPV-PQQFSLSRNSLTPAVNGYQDTGWRNFFVDPQVTRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDSD-- 123 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALANNRNLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 124 --WKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 LRYELDFFGKLKNL--SDADRQNYFASEEARRAVHILLVSSVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 248 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 Y A M+ P + +P N+ + ++ RPDI E +L + A IG A++ Sbjct: 249 TYRALPPEKGMK--GGEIAP-VKLPSNLS--SQILLQRPDIMEAEYQLKAADANIGAARA 303 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +PS++L ++ + + F + W+F PK+ +P+F+ G+ K+N++ AE Q+ Sbjct: 304 AFFPSITLTSGLSASSTELSSLFTPGSGMWNFIPKIDIPVFNAGRNKANLKLAEIRQQQS 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++ + +A K+V + + + + Q ++ + ++ + Y G S +++ Sbjct: 364 VVNYEQKIQSAFKDVSDTFALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEV 423 Query: 415 LDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 424 LDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|254235395|ref|ZP_04928718.1| hypothetical protein PACG_01300 [Pseudomonas aeruginosa C3719] gi|126167326|gb|EAZ52837.1| hypothetical protein PACG_01300 [Pseudomonas aeruginosa C3719] Length = 474 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 12 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 71 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 130 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L S+ +L ++S + SY+ +E+ Sbjct: 131 FSAGLSASYEVDFWGGRRAAYRSALESLKSSEYDRATVELTLLSGVANSYLQVLALREQQ 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 191 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 251 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 306 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 307 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 366 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 367 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 426 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 427 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 464 >gi|332992154|gb|AEF02209.1| RND efflux system outer membrane lipoprotein [Alteromonas sp. SN2] Length = 495 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 106/466 (22%), Positives = 217/466 (46%), Gaps = 37/466 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPT-QF-----SIGNSKNLINIDTLK--WWESFNDTSLNK 63 ++LAGC+ + PEY + + + QF ++ +++ L + L W + D L + Sbjct: 29 IVLAGCSSMAPEYERSNSSVANEWQFEAIEKTVEDTQGLSSQQALDIPWKDFIKDERLEQ 88 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD-- 121 ++ +AL N ++ + + +A+ R+DLFP S+S + STG++D Sbjct: 89 VIDLALSSNRSLRETIADVESARATYRIQRSDLFPDVNVSLSG----DRTKYSTGEIDTT 144 Query: 122 -------SDWKIDLFGQRR-----HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 S +++DLFG+ R +E+ LA+ ++A A AK+++I ++ +++ Sbjct: 145 YEAQAGFSSYELDLFGKNRSLSEAEMETYLASSETAKA----AKISLIGEVANAWLTLAA 200 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +S+A + K+ +++++ + + G S++ + E + SDI + + + Sbjct: 201 DSNLLSLAEETASNAKQAMDITNKRLSYGVDSRIDVASAETIYYNARSDIASYKTQVEQD 260 Query: 230 VHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G + + + + S +L + G+ +D++ RPD+ E L Sbjct: 261 KNALRLLVGEKFDDSLLAYTLPADSYGGSDSLVTDVPAGVSSDVLLVRPDVLSAEHDLKS 320 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P++SL + L D G ++ WS P + LPIFD G+ K+N Sbjct: 321 ANANIGAARAAFFPTISLTATGGLASSVLSDIFSGGASSIWSIAPSISLPIFDGGENKAN 380 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +E+ Q+ ++ + +A EV +AL + + VE +S LS+ Sbjct: 381 LAYSEAQQQKYLAAYEYAIQSAFTEVADALARRATIRDQLDAEDALVEASTRSYELSLAR 440 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y G S L+ +R + L ++ + + LY +G G Sbjct: 441 YENGVDSFQTALESQRTMYSAKQSLITTRQAELSNRLTLYKVLGGG 486 >gi|300940498|ref|ZP_07155069.1| putative outer membrane efflux protein OprM [Escherichia coli MS 21-1] gi|300454698|gb|EFK18191.1| putative outer membrane efflux protein OprM [Escherichia coli MS 21-1] Length = 432 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 32/442 (7%) Query: 29 MPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 MP+ P QFS+ S+N + N W F D + L+ AL N + A ++ Sbjct: 1 MPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMAALKVQ 57 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNS-------TGQLDSDWKIDLFGQRRHI- 135 A+ AD +P S + NLK +S TG L++ + +D FG+ +++ Sbjct: 58 EARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTG-LNASFDLDFFGRLKNMS 116 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 E+ N L + AQ + L ++S + SY + + ++ IA + L Y+++ + Sbjct: 117 EAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQ 175 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 G+++ L+L + I+S SDI + + + LLG + Q Q+ N Sbjct: 176 LLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVN 231 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + + G+ + ++ RPDI E L + A IG A++ +PS+SL I+ Sbjct: 232 SDSLRSVKLPAGLSSQILLQRPDIMEAEHGLMAANANIGAARAAFFPSISLTSGISTASS 291 Query: 315 NS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + W+F PK+ +PIF+ G+ +N+ AE Q+ + +++ + NA KEV + Sbjct: 292 DLSSLFNASSGMWNFIPKIEIPIFNVGRNHANLDIAEIHQQQSVVNYEQKIQNAFKEVAD 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDL 428 AL ++ Q + K ++ + Y+ G S L++LD ER AT + +DL Sbjct: 352 ALALRQSLNDQISAQQRYLASLKITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDL 411 Query: 429 SIAKRQLAKSYVDLYIAIGSGY 450 + A RQ+ + + LY A+G G+ Sbjct: 412 NYA-RQVNE--ISLYAALGGGW 430 >gi|316934233|ref|YP_004109215.1| RND efflux system outer membrane lipoprotein [Rhodopseudomonas palustris DX-1] gi|315601947|gb|ADU44482.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris DX-1] Length = 482 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 107/466 (22%), Positives = 205/466 (43%), Gaps = 28/466 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + S + GC + + P + L P ++ + + L WW F L +L++ Sbjct: 16 VASALVAASGGCILTQDLPDPALDL-PNRYKAASRTAVEKPPALDWWRGFRSAELTQLME 74 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLKT 114 A NL + A RI A A L PS S ++IS+ I + Sbjct: 75 EAQTVNLDVAAAVARIRQADAQARITGAALLPSLSGTGNGSQVKTSGSNISNTTIAGRRY 134 Query: 115 NSTGQLDSDW-KIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDARHFKE 172 ++ S +ID +G+ R + +A D L ++ + +Y ++ Sbjct: 135 STYSSSLSASYEIDFWGKNRDAALAAEETATATRFDRDTVMLTTMAGVANAYFQVLAAQD 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI A + + ++ + G + L + + E+ + + + +P L + NV+ Sbjct: 195 RIRTAESNIKSASRILDAIKQRLRAGTGTDLDVAQQESVLANQRAALPPLRLTLAQNVNA 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++TL+ P + + L P + G+P+DL+ RPDIR QE +LA + A Sbjct: 255 LATLVARPPESV-----RIAGGSLTRLASPRVTPGLPSDLLTQRPDIRRQEAQLASATAN 309 Query: 292 IGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G A++ +P++ L G + + F T + L PIFD G+I+ N + Sbjct: 310 VGSARAQFFPTIQLTAQGGYQSAALASLFTPQATFSNIAAGLTQPIFDGGRIQGNFDLTQ 369 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + +E T+++TV++A +V+NAL SI ++ + + + V +++ L+ R G Sbjct: 370 AQQEELLQTYRKTVVSAFADVDNALESIKQNTERLRLQREVVASSRRAFDLAEQQLRAGT 429 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 ++ +L+ + + E L + QLA+ + V L+ A+G G+ P Sbjct: 430 SDIVTVLNTQLTLFQAEDGL--IQTQLARFQAIVSLFQALGGGWEP 473 >gi|167646652|ref|YP_001684315.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167349082|gb|ABZ71817.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 485 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 116/477 (24%), Positives = 221/477 (46%), Gaps = 36/477 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLK----WWESFND 58 L A SL ++ A TVGP +T P P + G+S +D WW + Sbjct: 11 LAASVSLAVLAGACTTVGPNFTAPDAPGTTAYGAKGDSTPPEARLDAAPAAGPWWTALGS 70 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLK---- 113 L+ ++ AL + T+ +A + ++ + R P A+ +R NL+ Sbjct: 71 PVLDATIRQALVDSPTLAEADATLRQSQSALAQARGAAGPQVDATAGVNRERANLQAFGF 130 Query: 114 --------TNSTGQLDS-----DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 +N T L S + +DLFG +R IE + A +++ + D A L + + Sbjct: 131 TSFGDVTLSNPTFSLYSVGGSVGYDLDLFGGHKRRIEGAAARVEAQARRGDAAYLTLTAN 190 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + + +I +Q++ + NI+L G ++ + V ++++++ + + Sbjct: 191 VALQAVTIATLNAQIEAVNQMVAADQGNIDLVRRANALGGSTATARVSAQSQLEADRALL 250 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF---QPNLYIPINIGIPADLIRNRP 276 P+L+ H ++ L+G+ ++ + +F L P + +P+ L+R RP Sbjct: 251 PSLQGQLAAARHALALLVGHAPADWT------APDFTLADLTLADPAPVALPSTLVRKRP 304 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLP 333 DI E +L ++A IG+A +DLYP++ L S+ +L + F T W+ G L P Sbjct: 305 DILAAEAELHAAIADIGVATADLYPNIKLTASLTQGSLKPQDIFSYDATAWNVGAGLTAP 364 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G +K+ ++A +A +Q+TVL A +V +AL+++ D + + Sbjct: 365 IFNGGALKARRQQAREAAVASSARYQQTVLTAFAQVADALSALAADDAAIAAYGRSETQA 424 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S+ L+ + Y +G +LLD+LD +R +V+ + A+ Q V L+ A G+ + Sbjct: 425 DESLRLARVAYDKGGGTLLDVLDAQRRVHEVQASRARAQGQRLADAVRLFAASGADW 481 >gi|258542399|ref|YP_003187832.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256633477|dbj|BAH99452.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256636536|dbj|BAI02505.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256639589|dbj|BAI05551.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256642645|dbj|BAI08600.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256645700|dbj|BAI11648.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256648753|dbj|BAI14694.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256651806|dbj|BAI17740.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654797|dbj|BAI20724.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 483 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 112/474 (23%), Positives = 212/474 (44%), Gaps = 34/474 (7%) Query: 5 RAIFS-LFIVLLAGCTVGPEYTK--PHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 R +FS L L C+ P +TK P +P QFS ++ D WW ++ D L Sbjct: 11 RLLFSTLLCTGLVACS--PFHTKLPPSQVAVPAQFS-ATPQDAQPTDLTNWWTAWQDPLL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------------ 109 ++LV+ AL N I A ER+ ++ ++ L+P+ A+ Sbjct: 68 DQLVQNALAANPEIRMAQERVQESRAYTQMAKSALYPTIGATGGMMGGGVDWGHPVPPLM 127 Query: 110 ----PNLKTNST-GQLDS---DWKIDLFGQRRHIESSLANLDSAYAQV-DIAKLNVISKL 160 PN++ +T G L W+ D++G+ R + + ++ A A V + + + + Sbjct: 128 KMADPNIQDPATDGHLAGITMAWEPDIWGRNRARKRAAQHMALAAADVLHGTHMAIAADV 187 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ AR ++RI++ Q ++ + + +F G T++ L + A+I +++ P Sbjct: 188 AANYLTARGMQQRIALLDQSARTLQELLRYATARFDAGQTTRADLETITAQINQVQAQRP 247 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L +F H ++ L G P + S Q + P +P+ ++ RPD+ Sbjct: 248 LLVAAFDACRHRLAILSGLPPEQAPDL----SAPAQYRVPAPPVTELPSTVLDRRPDVLL 303 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSF-GPKLYLPIFDK 337 Q+ + ++ ++ K+DL P L G + PG + YLPIF Sbjct: 304 QKNIVQANLERLISTKTDLLPRFGLEFFGGDGRLRFDGIPGVSGSGGLMAVNAYLPIFTA 363 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I++ IR A+S ++ ++ +TVL + EVE+A S + + + L V + Sbjct: 364 GRIQAKIRAADSQLKQAVASYDQTVLTVLAEVEDAYESRSSADQNIASLSGEVSSLSLAT 423 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y G++++ DIL + +L A+ + A + V L A+G G++ Sbjct: 424 TQAQGLYEGGQFTMQDILTTRIKKISAQDELVSAQTRQALATVRLARALGGGWD 477 >gi|325124510|gb|ADY84033.1| RND efflux system, outer membrane lipoprotein CmeC [Acinetobacter calcoaceticus PHEA-2] Length = 464 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 19/447 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKN-LINIDTL--KWWESFNDTSLNKLVKIAL 69 L GC V Y P + + P F +K ++ D +WW FND LN+LV L Sbjct: 14 LVGCAAVVKTPYETPAVQV-PGSFQYDTAKTKTMSTDQYSDRWWTLFNDAQLNQLVSNVL 72 Query: 70 QQNLTILQATERINAAK--ENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD---- 123 ++N + A + A+ ++ + + L SS S H F N +S L Sbjct: 73 ERNSDLAVAGIALKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSMSAGVS 132 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R E+S + + ++I+ Y + ER + A Q L Sbjct: 133 YELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYTTAQQSLA 192 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K +L +++ GA S + L + E ++S ++ + +E+ I+ LL P Sbjct: 193 TSQKLYDLVQIQYKAGAVSGVDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLLHEP-- 250 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 L + Q P +P I G+PAD++ RPD++ E +L ++A K+ YP Sbjct: 251 --LQQLNIQEPKRLPRTALPAIGAGLPADILSRRPDLQASELRLRKALATKDATKASYYP 308 Query: 302 SLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S+SL S+ + + N + G L LP +K +I + ++ I +++ Sbjct: 309 SISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAIIQYRQ 368 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +LD ++ Sbjct: 369 TLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLLDAQQT 428 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 T + L K+ +YV L A+G Sbjct: 429 TRTARLSLVETKQSQYNAYVTLMQALG 455 >gi|332995054|gb|AEF05109.1| multidrug resistance outer membrane protein [Alteromonas sp. SN2] Length = 490 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 115/458 (25%), Positives = 211/458 (46%), Gaps = 28/458 (6%) Query: 16 AGCTVGPEYTKPHMPLLPTQFS-----IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC++ PEY KP P+ + S I N + + + W E D L L+++AL Sbjct: 24 GGCSLAPEYKKPENPVSASWISNEANRIENKSTISSGAQVNWQEFVKDRHLAALIELALN 83 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYASISHR-------FIPNL----KTNSTG 118 N + Q + AA+ RAD P+ + S + R IP + T G Sbjct: 84 SNRDLKQTLLNVKAARAQYGIQRADTLPTIAVQSTATRQRTPEDLRIPGMPSVQNTYRAG 143 Query: 119 QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +++D FG+ ++ E++L + ++++I+ +I SY+ + +R+ IA Sbjct: 144 VGFTSFELDFFGRVENMTEAALQEYLATEEAAQSLRISLIADVIQSYLVYQGAVKRLDIA 203 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES--DIPTLEKSFRMNVHNIST 235 QI + + S +K Q + ++ +A +++S ++ L++ + + ++ Sbjct: 204 EQIK--LSREVTQSKIKQRQAFGAATAIEFQDALALTLQSYVEVERLKREQELAQNALTL 261 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G + + K S + P + I+ G P +L+ RPDIR E +L A IG A Sbjct: 262 LVG--VQDITPMLNKISLDESP-IVDEISPGAPPELLIFRPDIRSAEHQLMARNANIGAA 318 Query: 296 KSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL G + ++ F WSF P+L LPI D G+ ++N+ A+ Sbjct: 319 RAAFFPSISLTGFFGASSMELSELFNSGQRSWSFSPQLSLPIIDNGRNQANLELAKIRKD 378 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++T+ A KEV +AL SI+ ++ T + E K+ + LS Y G L Sbjct: 379 IAVANYEQTIQLAFKEVADALASIDTLRREQTAQEKLTETSKERLRLSRARYENGIDDNL 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LD +R ++ + Q + LY ++G G+ Sbjct: 439 RFLDAQRENLTSQLAAINVRTQKQIAISTLYRSLGGGW 476 >gi|60279960|gb|AAX16305.1| PA2391 [Pseudomonas aeruginosa] Length = 472 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 216/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P+Q+ + D +WW++F L+ L++ AL Sbjct: 10 CLLLGACGSTPAPLDSGLAA-PSQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 68 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 69 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 128 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 129 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 189 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 249 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 304 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 305 ARAALFPRLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 365 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 424 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 425 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 462 >gi|207724533|ref|YP_002254930.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum MolK2] gi|206589755|emb|CAQ36716.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum MolK2] Length = 501 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 112/476 (23%), Positives = 211/476 (44%), Gaps = 38/476 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQF-----------------SIGNSKNLINIDTLKWW 53 +LAGCT+ P Y +P P+ + G+++ + + W Sbjct: 11 LAAMLAGCTLMPTYQRPAAPVPAAFAGASDKSDASDTSRERGNTGGDARPAGPVADIGWH 70 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIP 110 + F D SL +++ +AL N + A I A+ A LFP+ AS S R Sbjct: 71 DVFTDPSLQRVIGMALANNRDLRVAVLNIEKARAQYRVQDAALFPTVKASGSENASRTPA 130 Query: 111 NLKTNSTGQ-----------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVIS 158 L ++TGQ S +++DLFG+ R + + +L S +++++I+ Sbjct: 131 GL--SATGQPLVAHSYSATLGFSAYELDLFGRVRSLSAQALEQYLSTVEARRSSQISLIA 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ ++ + +A L L+ + G S+L+L + + + S D Sbjct: 189 EVATAYLTLAADQDLLKLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVDSARVD 248 Query: 219 IPTLEKSFRMNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + + + L+G TE L S+ ++ I G+ +DL++ RPD Sbjct: 249 VERYTAQVAQDRNALVLLVGADLPTELLPRSLPDSSAATGSVLATIPPGLTSDLLQRRPD 308 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 I E L + A IG A++ +PS+SL G+ + + F G + W+FGP++ LPI Sbjct: 309 ILQAEHDLKAANANIGAARAAFFPSISLTASAGTSSASLAGLFKGGSGAWNFGPQIALPI 368 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G ++N+ A +S +++ + A +EV +AL + + Q V+ Sbjct: 369 FDGGANRANLDVANTSRDIAVAQYEKAIQTAFREVSDALAQRGTLGRQIEAQQSLVDATA 428 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L+ +++G S L++LD +R+ + +L + + V Y +G G+ Sbjct: 429 DSYQLATARFKRGVDSYLNVLDSQRSLYTAQQNLINTRLSRFTNLVTFYKTLGGGW 484 >gi|300694137|ref|YP_003750110.1| outer membrane drug efflux lipoprotein, rnd efflux system domain [Ralstonia solanacearum PSI07] gi|299076174|emb|CBJ35487.1| putative outer membrane drug efflux lipoprotein, RND efflux system domain [Ralstonia solanacearum PSI07] Length = 508 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 111/428 (25%), Positives = 205/428 (47%), Gaps = 39/428 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+ FND +L+ L A + + T+ A R+N A+ + S RA LFP A Sbjct: 80 WWKLFNDATLDSLEAQAAEASPTLAAAAARVNQARAIVQSNRAALFPELDAGFGPTRQRA 139 Query: 103 SISHRFIP-----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +P +T Q ++ DLFG+ R + ++ A+ + A A+L++ Sbjct: 140 SAASAGLPVGAPVQPQTYWRAQATVAYEADLFGRVRNSVSAADADAERVEALYRAARLSL 199 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + + ++ ++L +F G +L + + +AE+ + Sbjct: 200 QADVAQTYFSLRTLDAEEALLARTVVGREEALKLVQRRFNTGDIGELDVARADAELATAR 259 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 SD + + + H ++TLLG + F Q++ Q + + G+P+ L+ RP Sbjct: 260 SDRIGVARRRAVLEHALATLLGKAPSGFAL----QADPLQ-AATVRVPPGLPSALLERRP 314 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD--NSFPGYNTHWSFGP----K 329 D+ E+ +A + A+IG+A++ +P L L G +HD + + W GP Sbjct: 315 DVAAAERAMAAANARIGVARAAFFPQLQLTGGFGFESHDIGDLLKWSSRTWLLGPLVGTA 374 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQ 387 L LPIFD G + +++A ++ +E ++E VL A +EVE+ L+ + D+ +K+Q Sbjct: 375 LSLPIFDGGARSAGVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQ---SKVQ 431 Query: 388 -HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLY 443 AV ++ LS Y G + LD++D ER + +V V L+ + + V L Sbjct: 432 DDAVRASSRAAQLSRTRYNAGSVNYLDVIDAERNMLSAQRVAVQLAGGR---VNATVGLV 488 Query: 444 IAIGSGYN 451 A+G G+ Sbjct: 489 KALGGGWG 496 >gi|329114227|ref|ZP_08242989.1| Outer membrane protein OprM [Acetobacter pomorum DM001] gi|326696303|gb|EGE47982.1| Outer membrane protein OprM [Acetobacter pomorum DM001] Length = 536 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/463 (21%), Positives = 197/463 (42%), Gaps = 35/463 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTLKWWESFNDTSLNKLVKI 67 L GC + P Y KP +LP +S S + I D WW D LN+L Sbjct: 24 LVGCDMAPRY-KPAQFVLPDNWSGQGVMKPARPSDDAIRPD---WWTMLGDPELNRLEDQ 79 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQ 119 A++ N + E +++ ++ L+P + Y HR Sbjct: 80 AMRLNPDLQAQAEAFMQSRDMAAEAKSHLYPQLNGAASGAKYKGSQHRLWRGAGATGPMY 139 Query: 120 LDSD-------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + S+ W+ D + R I + + A A+L++ ++L Y+ R Sbjct: 140 MSSEQYSATATWEPDFWSAIRNRIRMAKQGVQEDAANYASARLSLQAELASDYVILRGLD 199 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ + Y+ ++++ ++ + + + EA++ + ++ + + H Sbjct: 200 AQDAVYKDSIRYYQTAVQVTRMRLAGAIAPGMDVSRAEAQLYTTQAQETDIRTQRDVMEH 259 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ L+ F H F+ I +P+ L+ RPDI E+++A + Sbjct: 260 AIAVLVNQAPASF-HIAPVTKLTFEEK---EPPIALPSTLLERRPDIAAAERRMAQANRA 315 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG++++ YP ++ N DN F YN + FG + LP+F G ++ ++R Sbjct: 316 IGVSRAAFYPHVTFNAMTGFM-DNGFDLASLYNAMYQFGAQAVLPLFQGGLRRAELQRTW 374 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S ++ ++ TVL+A +EVE+ LT N K V + +AV+ ++ ++M Y G Sbjct: 375 SGYRQTEDIYRSTVLDAFQEVEDNLTRTNRLKTQVKQESNAVDAALRTQGMTMALYTGGL 434 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD++ + A + L A+ + + V L A+G G++ Sbjct: 435 TNYLDVVVAQVAALNARISLVQAQTRQVDARVQLVRALGGGWS 477 >gi|189464142|ref|ZP_03012927.1| hypothetical protein BACINT_00478 [Bacteroides intestinalis DSM 17393] gi|189437932|gb|EDV06917.1| hypothetical protein BACINT_00478 [Bacteroides intestinalis DSM 17393] Length = 454 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 109/457 (23%), Positives = 218/457 (47%), Gaps = 37/457 (8%) Query: 13 VLLAGCTVGPEYTKPHMPL--LPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIA 68 +LL+GC + YTK + P+ +P Q G +++ ++ + W E F D L L++ Sbjct: 13 LLLSGCGI---YTK-YEPVTSVPDQLYGGEVVAEDTASLGNMDWRELFTDPHLQSLIEQG 68 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSD 123 LQ N A R+ A+ ++S + P+ +A + + T+ Q + + Sbjct: 69 LQNNTDYQSAELRVEEAQATLMSAKLAFLPA-FALAPQGTVSSFDTHKATQAYSLPVTAS 127 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQ 179 W++D+FG+ R+ + L YAQ + V ++LI +Y E+++I+ Q Sbjct: 128 WELDVFGRMRNAKKQSKAL---YAQSQDYRQAVRTQLIAGIANTYYTLLMLDEQLAISRQ 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + +K+ + + G ++ ++ ++EA ++ + L+K ++++ LL Sbjct: 185 TEEAWKETVASTRALMNAGMANESAVSQMEATYYQVQGSVLDLQKQISQTENSLALLL-- 242 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A HY ++ + Q ++GIP ++ RPD+R E+ L + A+S Sbjct: 243 -AETPRHY--ERGSLQQQQFPADFSVGIPVQMLSGRPDVRSAERSLEAAFYGTNQARSAF 299 Query: 300 YPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPS++L+G+ T+ PG + G L P+F++G++ + R A + +E Sbjct: 300 YPSITLSGNAGWTNSAGSMILNPGKFLASAVG-SLTQPLFNRGQVVAQYRIARARQEEAA 358 Query: 356 ITWQETVLNAIKEVENALTS--INEDKKIVTKLQHA-VELHKKSMSLSMINYRQGRYSLL 412 + +Q+++LNA EV +ALT+ ++ KK++ Q A ++ KS SL M G + L Sbjct: 359 LGFQQSLLNAGSEVNDALTAYQTSQGKKLLLDKQVASLQTALKSTSLLM---EHGNTTYL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L + ++ + +S ++L+ A+G G Sbjct: 416 EVLTARQTLLSAQLSQTANHFTEIQSLINLFQALGGG 452 >gi|295697872|ref|YP_003602529.1| Copper/silver efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|13633958|sp|Q9ZHD2|SILC_SALTY RecName: Full=Probable outer membrane lipoprotein silC; Flags: Precursor gi|4206627|gb|AAD11746.1| putative outer membrane protein SilC [Salmonella enterica subsp. enterica serovar Typhimurium] gi|295059984|gb|ADF64721.1| Copper/silver efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 461 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 224/460 (48%), Gaps = 33/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + +++ + W F D +++L+ Sbjct: 12 IFILAGCVSLAPEYQRPPAPV-PQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ E+ N ++ + ++S + SY + E++ IA + Sbjct: 131 LSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 191 LKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTY 250 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P+ + + + PNL + ++ RPDI E +L + A IG A+ Sbjct: 251 RAVPSEKGIKGGEIAPVKLPPNL--------SSQILLQRPDIMEAEYQLKAADANIGAAR 302 Query: 297 SDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L ++ + F + W+F PK+ +PIF+ G+ K+N++ AE Q+ Sbjct: 303 AAFFPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQ 362 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++ + +A K+V + L + + + Q ++ + ++ + Y G S ++ Sbjct: 363 SVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIE 422 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD ER AT + +DL+ + RQ+ + ++L+ A+G G+ Sbjct: 423 VLDAERSLFATQQTILDLTYS-RQVNE--INLFTALGGGW 459 >gi|325519452|gb|EGC98845.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 328 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 149/304 (49%), Gaps = 9/304 (2%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ VI+++ +Y+ R E++++A + LD ++ L+ ++ G + + L E + Sbjct: 21 RIGVIAEVAGAYVSERALHEQLALAQRTLDARERIAALTQRRYAAGTSDAIELRSAEMLV 80 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 S + L++ V + L G +F + + P+ G P++L+ Sbjct: 81 ASARASQAALQREHAQAVRALQLLAG----DFARNVPGDATTLDALAIAPVAPGAPSELL 136 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 RPDIR E +L + A+IG A++ +P ++L GS++ F G + W+F P+ Sbjct: 137 ERRPDIRQAEARLKAANAQIGAARAAFFPRIALTTDVGSVSDAFSGLFAGGTSVWTFAPR 196 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQH 388 + LP+F G+ ++N+ A + +++TV A +EV +A + + D+++V + Q Sbjct: 197 ITLPLFAGGRNRANLDVATARTHIAVAEYEKTVQTAFREVADAFAARDWIDRQLVAQ-QD 255 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L+ Y G + L++LD +R+T + +L K+ + + LY A+G Sbjct: 256 VYAADGARLKLAERRYAGGVATYLELLDAQRSTYESGQELIRLKQLRLANAIALYRALGG 315 Query: 449 GYNP 452 G+ P Sbjct: 316 GWTP 319 >gi|146302588|ref|YP_001197179.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146157006|gb|ABQ07860.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 479 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 109/473 (23%), Positives = 219/473 (46%), Gaps = 42/473 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + +AGC T +P F S++ N LKW + F D +L +L+ IAL+ Sbjct: 15 LCLAVAGCKAPAAETASTSAPVPEAFGNVKSQDTTNTAALKWKDFFKDQNLVELIDIALK 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPS----SYASISH--RFIPNLKTNSTGQLD--- 121 N + + I AK +I + L P+ + A I R+ ++T ++ Sbjct: 75 NNQELNMTLQEIEIAKNDIRVRKGALLPTVGVRAGAGIEKVGRYTSQGAGDATTEIKPGV 134 Query: 122 --------------SDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYID 166 ++W++D++ + R+ + + N A + + N+I+++ SY + Sbjct: 135 ETPDPLPDYTIAAYANWEVDIWKKLRNSKKAAVNRYLATVEGKNFVITNLIAEIADSYYE 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDIPTLE 223 ++ I Q ++L +E+ ++ ++L + K +AE+ KS+E DI L+ Sbjct: 195 LLALDSQLEIVKQTIELQSNALEIVKVQKQAARATELGVQKFQAEVLTSKSLEFDI--LQ 252 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 K + N + I+ LLG YP ++++ NF L +N GIP+ L+ NRPD++ E Sbjct: 253 K-IKENENKINFLLGRYP-----QEIKREKTNFTDLLPAVVNSGIPSQLLANRPDVKQAE 306 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL-----THDNSFPGYNTHWSFGPKLYLPIFDK 337 +L + + +AK++ YPSL ++ + + ++ +FP + +S L P+ ++ Sbjct: 307 LELVAAKLDVKVAKAEFYPSLDISAAFGVQAFKPSYLFTFPE-SILYSLAGDLAAPLINR 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 IK+ A + + + +T+LNA EV L+ I +K V+ +S+ Sbjct: 366 NAIKAEFSSANARQLQALYNYDKTILNAYLEVSTQLSKIENLQKGYDLKSQQVDALNRSI 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S ++ R ++L +R + +++L K++ + V +Y +G G+ Sbjct: 426 DVSNDLFKSARVDYFEVLMTQRDALEAKLELIDTKKEQLNAAVHVYRDLGGGW 478 >gi|325925042|ref|ZP_08186464.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325544554|gb|EGD15915.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 496 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 112/472 (23%), Positives = 210/472 (44%), Gaps = 48/472 (10%) Query: 22 PEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNLTIL 76 P YTKP + + +++ L WWE +D L +LV AL + + Sbjct: 24 PNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELHDPLLTQLVTQALADSPNLR 83 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIP-------------------------- 110 A R+ A + RA+ P AS + + Sbjct: 84 AAQARLRANRALAQQRRAERLPKLNASALYAYAEPPQTIVDTLGGLQQGQPGQPPAAGNQ 143 Query: 111 --NLKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL+ + D+ W++D FG+RR E +LA ++ A++ A++ + +++ Y+ Sbjct: 144 ALNLEETQIYSAGFDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAAEVGQVYL 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + R++IA LD +++++L + QGA S L + ++ +++ E+ LE Sbjct: 204 NYRGLQARLAIADTNLDKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQEAQRLPLEMQ 263 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPDIRYQE 282 + ++ ++G P + Q + QP +P + + LIR RPD+R E Sbjct: 264 AQEAQDQLALMVGREPGA-----LDAQLSTPQPLPMLPTQVRVDDAGALIRRRPDVRKAE 318 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGK 339 ++LA S A+IG A + +P +SL G ++ S +N+ P L IFD GK Sbjct: 319 RELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALTTLAVPMLRWSIFDFGK 377 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + +A + + ++ TVL A+++ +AL +K + + A +S L Sbjct: 378 TRAQVEQARAGNAGRTAAYEGTVLAALQDANSALARFGSARKQLVVARQAEASATRSAGL 437 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 438 MQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|285018545|ref|YP_003376256.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283473763|emb|CBA16266.1| probable outer membrane efflux protein [Xanthomonas albilineans] Length = 473 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 122/471 (25%), Positives = 217/471 (46%), Gaps = 38/471 (8%) Query: 2 NILRAIFSLFIVLLAGC--TVGPEYTKPHMPLLPTQFS-IGNSKNLINIDTLKWWESFND 58 L +I +L + L+GC T P+ T+P LP +S + + N + WW+ F D Sbjct: 6 TFLHSILALAAIALSGCASTPLPDLTQP----LPAHWSDLPEAANPRPAGS-AWWQDFQD 60 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-T 117 L+ LV AL +L + QA ++ AA+ V A L P + P+ + Sbjct: 61 PQLDALVAQALHDDLDVAQALAKLRAARRMNSVVDAPLRPQLHIRTEEPIDPDASASFLV 120 Query: 118 GQLDSDWKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 +++W++ LFG+ + H+ +S +L SA A + + I+ ++ +ID RH ++ Sbjct: 121 AGFNAEWELPLFGRDKANHLVAS-GDLQSAQANLAQVRAATIADVVRYWIDLRHAQQAER 179 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN--- 232 ++ I + Q AT + +LV+L+ + + R V Sbjct: 180 LSQDIASARQ-----------QQATLQGTLVRLQLAAPATGAQAQATALQARNAVEEPRR 228 Query: 233 --------ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ LLG A + + +L I +PADL+R RPDI E + Sbjct: 229 AAAAAAQRLAVLLGRSAPDPAWSATTATTAPP-SLQIAAIDSVPADLLRRRPDIAAHEAE 287 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL-THDNSFPGYNTHW--SFGPKLYLPIFDKGKIK 341 + + +GIAK+D YPS+ L G+I T S+ +TH S GP + +P+FD G K Sbjct: 288 VLSAAGTLGIAKADRYPSIGLGGAIRWSTKLVSYRRTSTHGIASLGPVIDIPLFDWGLRK 347 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + + + +++ VL A+ E +NAL+++ + ++ V Q A++ +++ Sbjct: 348 AKAKARGDLLEAAALAYRQNVLEAVAEAQNALSTLEQQQQNVQTQQQALQAQQQAADTMQ 407 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G S LD+ + + + LS +RQ +YV L++A+GS P Sbjct: 408 QRRRLGLVSDLDVAAQQSERDQAALALSETQRQRDLAYVALHMALGSSNTP 458 >gi|167645302|ref|YP_001682965.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167347732|gb|ABZ70467.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 471 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 107/465 (23%), Positives = 202/465 (43%), Gaps = 27/465 (5%) Query: 9 SLFIVL----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 S+F++L L CT+ P+Y +P +P+ T + + + L W + F DT L Sbjct: 6 SVFVLLAASALTACTMAPKYERPALPVATTWPTASANGQTASAGDLSWRQVFEDTRLAGT 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKT----NSTG 118 + +AL + + A I A+ RA L P+ ++S P T TG Sbjct: 66 IDLALANSRDLRVAVLNIERARATYRIQRAALLPTVNGALSGTKSETPLGATPFPIGGTG 125 Query: 119 QLD----------SDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDA 167 L+ + +++D+FG+ R ++ N A Q A++++I++ +++ Sbjct: 126 SLEIENYNANVGITAYELDIFGRVRSLKDQALNSYLATEQTARTAQISLIAETANAWLTL 185 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ +++A L + ++ L+ +F GA S+L+L + ++ SD+ T Sbjct: 186 AADQDLLTLAKDTLKSREGSLSLAQRQFDVGAASQLNLRTSQTLAETARSDVATYAAQVE 245 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + + L+G E + + + G+ +D++ RPD+ E L Sbjct: 246 RDKNALRLLVG---AEVPANLLPAGGVIAAQILADLPAGVTSDVLTRRPDVLAAEHALMG 302 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +P +SL GS D F WSF P + LPIF G K+ + Sbjct: 303 ANANIGAARAAFFPRISLTGSYGSASADLDGLFKSGTKAWSFTPSITLPIFAGGANKAGL 362 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A++ + T+++ V A +EV +AL + + + + L+ + Y Sbjct: 363 DSAKAGQKIAVATYEKAVQTAFREVADALATQATIGDRLAAQERLAAAAVDTARLTKLRY 422 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +G S L +LD +R + L A+ + V LY +G G Sbjct: 423 DRGVDSSLVLLDAQRTQYSAQQGLINARLAGVSNRVTLYKVLGGG 467 >gi|238028563|ref|YP_002912794.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] gi|237877757|gb|ACR30090.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] Length = 516 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/342 (25%), Positives = 169/342 (49%), Gaps = 11/342 (3%) Query: 117 TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T D+ W+IDLFG RR IE++ A ++ A + ++++ +++ +Y+ R ++R++ Sbjct: 159 TASFDASWEIDLFGGTRRAIEAASAQAEAVDADLADTQVSLAAEVANAYVGLRDQQQRLA 218 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + +L ++ +EL+ + +G + +L ++++ + + L+ ++ ++ Sbjct: 219 LSRRTAELQQRMLELTLQRRDRGVVDDADIERLTTQVENTRATLIPLDAQVTESLDRLAI 278 Query: 236 LLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G P T L P L + IG L++ RPDIR E++LA S A+IG Sbjct: 279 LTGRAPGT--LDAQLSAPGAALPTLPATVAIGDAGALLKQRPDIRAAERRLASSNAQIGE 336 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +D +P ++L G + + S PG+ N W P L +FD G+ + +R AE+ Sbjct: 337 RVADYFPKVTLFGDLGFSA--SDPGHLLRKQNYSWIGAPYLQWNLFDFGRTRGAVRAAEA 394 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + E + + VL A+++ AL+ + V L +S +L YR G Sbjct: 395 ARDEAEANYTKAVLAALQDANTALSRYGHQRDHVVALAKIETSATRSAALMNQRYRAGVS 454 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL+D+LD +RA ++ + +L Y+ L ++G G+ Sbjct: 455 SLIDLLDTQRAALSARQNVIAGQAELLDDYISLQKSLGLGWQ 496 Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 26/173 (15%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHW-------- 324 PD+ + +L ++ A++ ++D P L + + T + N+F Sbjct: 87 PDLHAAQARLREARAQLSRQRADALPKLGADAAALRTREPDANAFAALTGSSGASGSGNA 146 Query: 325 ----SFGP-KLYLPIFDK-------GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 GP +LY FD G + I A + A+ +T ++ EV NA Sbjct: 147 ASRPGTGPIQLYTASFDASWEIDLFGGTRRAIEAASAQAEAVDADLADTQVSLAAEVANA 206 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 + + ++ + + EL ++ + L++ +G ++D DIER T +VE Sbjct: 207 YVGLRDQQQRLALSRRTAELQQRMLELTLQRRDRG---VVDDADIERLTTQVE 256 >gi|260172546|ref|ZP_05758958.1| outer membrane protein oprM precursor, multidrug resistance protein [Bacteroides sp. D2] gi|299147005|ref|ZP_07040072.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] gi|315920839|ref|ZP_07917079.1| outer membrane protein oprM [Bacteroides sp. D2] gi|295086138|emb|CBK67661.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Bacteroides xylanisolvens XB1A] gi|298514890|gb|EFI38772.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] gi|313694714|gb|EFS31549.1| outer membrane protein oprM [Bacteroides sp. D2] Length = 467 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 25/419 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYA 102 N L W E F D L L++ L+QN +L A + + AA+ +++S R PS S Sbjct: 56 NFGNLPWREVFTDPQLQSLIEAGLKQNTDLLSAAQNVKAAEASLMSARLAYAPSLGLSPQ 115 Query: 103 SISHRFIPNLKTNSTG-QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVI 157 F N T + + + W+IDLFGQ +R + +L AY Q + VI Sbjct: 116 GTISSFDKNAATKTYSLPVTASWQIDLFGQLLNAKRSAQVTLKQ-TKAYRQA--VQTQVI 172 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKS 214 S + Y ++ I ++ KKN E A ++ +E A Sbjct: 173 SNVANMYYTLMMLDRQLEITKATAEILKKNAETME-AMKDAAMYSINSAGVEQSKAAYAQ 231 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + IP +E+S R + +STLLG E H +++ Q L ++ G+P L+ N Sbjct: 232 VLASIPDIEQSIRETENALSTLLG----EAPHAIKRGELEAQV-LPTELSAGVPIQLLSN 286 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKL 330 RPD++ E LA A++ YP ++L+GS T+++ PG G L Sbjct: 287 RPDVKAAEMSLASCYYNTNSARAAFYPQITLSGSAGWTNNSGAGIVNPGKLLASVVG-SL 345 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F +G+ + ++ A++ ++ +++Q+ +LNA EV NAL+ + + V Q V Sbjct: 346 TQPLFYRGQNIARLKAAKAQEEQAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRQMQV 405 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E KK+ + + G + L++L +++ ++ ++ V LY A+G G Sbjct: 406 ESAKKASEDTKELFNLGTSTYLEVLSAQQSYLSAQISQVSDCFDRMQAVVSLYQALGGG 464 >gi|317047656|ref|YP_004115304.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316949273|gb|ADU68748.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 456 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 103/421 (24%), Positives = 205/421 (48%), Gaps = 34/421 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRF 108 +WW +F D LN+LV ALQ N IL A R++ + + + D +PS + A +H+ Sbjct: 47 QWWHTFGDEHLNRLVNQALQHNSDILSARARVDQYRAQLRATEGDNYPSLTAGAGATHQR 106 Query: 109 IPNLKT-----NSTGQ--LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 + T N+ Q L +++++DL+G R + I ++ A+L + A A+L V S + Sbjct: 107 AISAATGLPYENAVFQASLQANYEVDLWGSRSNSISAAEASLAAQRAAASAAELTVASSV 166 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y E++ + L +++L+ +F G +S+L ++ +E ++ ++ +P Sbjct: 167 ASGYFSLCALDEQLRVTEATLASRANSLKLAQRQFETGYSSRLEWMQASSEYQTAKAQVP 226 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDI 278 L+ + +S L+G E ++++F N +P + +P+ L+ RPDI Sbjct: 227 QLQHQITQQENALSVLVGMNPREI-----ARADDF--NQVMPQTLPNLLPSQLLNRRPDI 279 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPK 329 +++L S A + A++ L P+L+L S F Y+ H WS G Sbjct: 280 VQAQRQLLASDASLAAAQAQLLPTLNLTAS------GGFESYHLHELLANPFRLWSIGGS 333 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + PI ++ + + + A ++ + +++ V NA EV+ AL +I +++ + +L+ Sbjct: 334 VLAPILNREALTAQVDVAMATRNQALYGYEKVVRNAFAEVDTALDAIQRNQEQLVELEKQ 393 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++ ++ Y+ G S LD LD +R ++ + K L + ++LY A+G G Sbjct: 394 QSDVSEALRIARNRYQNGYASYLDELDAQRTLFSTQLSVVSVKNTLLLAQIELYRALGGG 453 Query: 450 Y 450 + Sbjct: 454 W 454 >gi|83745674|ref|ZP_00942732.1| Probable outer membrane drug efflux protein [Ralstonia solanacearum UW551] gi|207739481|ref|YP_002257874.1| outer-membrane drug efflux protein [Ralstonia solanacearum IPO1609] gi|83727751|gb|EAP74871.1| Probable outer membrane drug efflux protein [Ralstonia solanacearum UW551] gi|206592859|emb|CAQ59765.1| outer-membrane drug efflux protein [Ralstonia solanacearum IPO1609] Length = 508 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 109/428 (25%), Positives = 202/428 (47%), Gaps = 39/428 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+ FND +L+ L A + + T+ A R+ A+ + S RA LFP A Sbjct: 80 WWKRFNDATLDSLEAQAAEASPTLAAAAARVGQARAIVQSNRAALFPELDAGFGPTRQRA 139 Query: 103 SISHRFIP-----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +P +T Q ++ DLFG+ R + ++ A+ + A A+L++ Sbjct: 140 SAASAGLPVGAPVQPQTYWRAQATVAYEADLFGRVRNSVSAADADAERVEALYRAARLSL 199 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + + ++ ++L +F+ G +L + + +AE+ + Sbjct: 200 QADVAQTYFSLRTLDAEEALLARTVVGREEALKLVQRRFSTGDIGELDVARADAELATAR 259 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 S+ + + + H ++TLLG + F L Q+ + + + G+P+ L+ R Sbjct: 260 SERIDVARRRAVLEHALATLLGKAPSGFTLPATPLQAADLR------VPPGLPSALLERR 313 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD--NSFPGYNTHWSFGP---- 328 PD+ E+ +A + A+IG+A++ +P L L G +HD + + W GP Sbjct: 314 PDVAAAERAMAAANARIGVARAAFFPQLQLTGGFGFESHDLGDLLKWSSRTWLLGPLVGT 373 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKL 386 L LPIFD G + +++A ++ +E ++E VL A +EVE+ L+ + D+ V Sbjct: 374 ALSLPIFDGGARSAGVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQSKVQD- 432 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLY 443 AV ++ LS Y G + LD++D ER + +V V LS + + V L Sbjct: 433 -DAVRASTRAAQLSRTRYNAGSVNYLDVIDAERNMLSAQRVAVQLSGGR---VNATVGLV 488 Query: 444 IAIGSGYN 451 A+G G+ Sbjct: 489 KALGGGWG 496 >gi|157147058|ref|YP_001454377.1| hypothetical protein CKO_02835 [Citrobacter koseri ATCC BAA-895] gi|157084263|gb|ABV13941.1| hypothetical protein CKO_02835 [Citrobacter koseri ATCC BAA-895] Length = 454 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/431 (23%), Positives = 208/431 (48%), Gaps = 23/431 (5%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +LR +F +L AGC ++ P Y+ P P+ + N ++ D W + ND L Sbjct: 1 MLRIFLFVFALLSAGCVSLDPHYSTPDAPVPASLPGAQGQGNAVSRD---WQQIVNDARL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG 118 ++V AL N + +A I++A+ RA LFP+ AS+S R + N T ++ Sbjct: 58 QQVVNTALNSNRDVQKAIADIDSARALYGEARASLFPTVNASLSSTRSRTLAN-GTGTSA 116 Query: 119 QLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D S +++DLFG+ + + + L S + + +L +I+++ +++ Sbjct: 117 EADGAVSSFELDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSN 175 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A + + + ++++ + G + + + + + + + + + +++ + Sbjct: 176 LALARETMASAENSLKIVQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVAQDINAL 235 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L G E + +S + Q +P G+ + ++ RPDI+ E L + A IG Sbjct: 236 NLLAGTTLPESVLPGTLESLDAQVITLVPA--GVSSSVLLRRPDIQEAEHNLKSANADIG 293 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAES 349 A+++ +P++SL S + D + +H WSF P + LP+F G + +R AE+ Sbjct: 294 AARANFFPTISLTASAGVGSD-ALSSLFSHGMKVWSFAPSITLPLFTGGSNLAQLRYAEA 352 Query: 350 SAQEQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + T+++TV +A K+V +AL D+++ + Q+ V +K++ + M YR G Sbjct: 353 QKRGLIATYEKTVQSAFKDVADALARRATLDEQLDAQRQY-VAAEQKTLDVGMRRYRAGV 411 Query: 409 YSLLDILDIER 419 L +L +R Sbjct: 412 GDYLTVLTAQR 422 >gi|322434093|ref|YP_004216305.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] gi|321161820|gb|ADW67525.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] Length = 490 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 120/484 (24%), Positives = 222/484 (45%), Gaps = 54/484 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL--PTQF------SIGNSKNLINIDTL---KWWES 55 + + + L GC VGP+Y KP +P P F S N D + WW Sbjct: 15 LLAAGLSLTTGCMVGPKYVKPTVPTYQAPETFKDAYKESDPNWHPATPADAVLRGDWWNI 74 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------SYASIS 105 F D LNKL A QN ++ A R + A+ I RADLFP+ Y+ Sbjct: 75 FQDPELNKLEVEAGIQNQSLKSAAARYDGARAQIGINRADLFPTIGTGPSAGGIRYSDQR 134 Query: 106 HRFIPNLKTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + P+ T G L ++++DL+G+ RR + + ++ A + A+L++ S L Sbjct: 135 PFYTPSGSTPGQGTVALPLTFNYEVDLWGRIRRTVNIAKEETQASAADLQGAQLSIQSDL 194 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI---ES 217 Y + R + + + + Y++ + ++ +F G + + + + ++++ + Sbjct: 195 AVDYFEVRSSDAQYKLLAETIKDYQEALRITTNRFEGGVVPESDVFQAKTQLQAAIVQQH 254 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 D+ ++ H I+ L+G P F S P P I G+P+ L+ R Sbjct: 255 DVLVQRANYE---HAIAVLVGQPPNSF-------SVPVAPLETKPPFIPYGLPSQLLERR 304 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYL 332 PDI E++ ++ +IGIA++ +P+LS N S L T + F N ++ GP+L Sbjct: 305 PDIAAAERRAHEANERIGIARAAYFPTLSFNNSFGLQANTLGSFFSAGNLAYTLGPELDE 364 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ----H 388 + D G+ + +A + Q+ +++TVL A ++VE+ L+++ +I+T Q Sbjct: 365 TLLDFGRRRGISNQAIAGYQQSSADYRQTVLTAFQQVEDNLSAL----RILTDEQEQQRQ 420 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV-DLSIAKRQLAKSYVDLYIAIG 447 A E + + ++ Y G + L ++ ++ E D+ I +R++ S V L A+G Sbjct: 421 ATEAAQGAQNIFNNRYVGGLDTYLQVVTAQQTALLNERNDIDIMRRRMDAS-VLLIKALG 479 Query: 448 SGYN 451 G++ Sbjct: 480 GGWS 483 >gi|161521513|ref|YP_001584940.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189352318|ref|YP_001947945.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160345563|gb|ABX18648.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189336340|dbj|BAG45409.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 476 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 109/458 (23%), Positives = 209/458 (45%), Gaps = 32/458 (6%) Query: 16 AGCTVGP--EYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 AGC V P T P L P + + T WW F D +L++L+ L Sbjct: 15 AGCAVQPAQHATLPDAVGALAPATWDTAVPAAASDAAT--WWAQFRDPTLDRLIATVLDG 72 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP---NLKTNSTGQLDSDW 124 NL + A ERI A+ S RA L P +++AS + + +P + L W Sbjct: 73 NLDLQAAAERIKQAQALTASKRAALLPELDATAHASDARQNVPPPLGYVRQAGAGLALSW 132 Query: 125 KIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 D+FG +R + ++ A L D +L + + +Y+D R ++ + + + Sbjct: 133 SPDVFGGERLDLLAARAELVGQTHAEDAMRLALAADAASAYVDLRWAQQELKLLQDNAAI 192 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ +EL+ + G +++L + + + ++ ++E+ I ++ I+ G E Sbjct: 193 RQRALELTRKRQAFGLSTELDVTRAKNQLDALEARIAPTRAQIAHQLNLIAVYSGR-TPE 251 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + + P I +P+ + RPD+ ++ A++G+A ++ YP Sbjct: 252 SIDQLVLAESAPIPAPPAGAPITLPSQALLRRPDVLTAYAQVERRAAQVGVANAERYPKF 311 Query: 304 SLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 SLN G +A ++ DN F + S PIFD G+I ++I ++ES +E Sbjct: 312 SLNLADGVLAASYLGLPTLTDNLFSAALSATS-------PIFDAGRIAADIAQSESRLRE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++T+L A++EVE+A S+ +L A+ ++++L+ Y+ G LD Sbjct: 365 SELALRQTMLQALREVEDARASLVATDAASQQLGSALAASDRALALATRLYKGGATDFLD 424 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + A + L+ A R+ A + + LY ++G G++ Sbjct: 425 VLTAQEAYLRDSDSLNQAAREHALAAIALYRSLGGGWS 462 >gi|319943412|ref|ZP_08017694.1| outer membrane efflux protein OprM [Lautropia mirabilis ATCC 51599] gi|319743227|gb|EFV95632.1| outer membrane efflux protein OprM [Lautropia mirabilis ATCC 51599] Length = 478 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/472 (22%), Positives = 215/472 (45%), Gaps = 38/472 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFS-----------------IGN-----SKNLINID 48 +++LAGC ++ P P P+ P QF+ GN + + D Sbjct: 11 LLVLAGCGSLAPLPKNPDAPV-PDQFAHAQPHDAAARPSASQDAAGNPVTTAAAQPVAAD 69 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 + W E F + +L +L++IAL N + A + + RAD PS S + Sbjct: 70 -IGWKEFFVNPALQQLIQIALDNNRDLRLAALNVERTQALYRIQRADRLPSVNGSFGLQR 128 Query: 109 IPNLKTN------STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 P++ T S G + +++D FG+ + + ++L++ + A++ +++ + Sbjct: 129 QPSVLTGEQTSNYSIGLGITAFELDFFGRVKDLTRAALSSYMATEEAQRTAQIALVAGVA 188 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ + E++++ L + + +L+ L++ GA S+L + ++ + + + + T Sbjct: 189 NAYLGLQSLDEQLALTRATLKTREDSQQLTQLQYRNGAASELDAKQADSLVYTARATLAT 248 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L++ + ++ LLG L + + + GIP++ + RPDIR Sbjct: 249 LQRQRDVAYDALAVLLGQQPPAELITADTHGDRVE---LQELPAGIPSETLMRRPDIRQA 305 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E KL + A IG A++ +P +SL + D+ F W+ P LPIFD G Sbjct: 306 ELKLRAAEANIGAARAAFFPRISLTATAGFGSRQLDDLFDHGKFIWTLNPNAVLPIFDYG 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++N+ ++ + ++++ + A +EV +AL + + + Q V + + Sbjct: 366 RNRANLDVSKVDQKIAIASYEKAIQTAFQEVSDALANRRGLVEQLDAQQGLVRTEGERLE 425 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + Y+ G S D+LD +R+ + L A+ ++ V+LY +G G+ Sbjct: 426 LANLRYKNGVASYFDVLDAQRSHFAAQQALITARTAQRQNLVELYKVLGGGW 477 >gi|262374954|ref|ZP_06068188.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262309967|gb|EEY91096.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 482 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 120/471 (25%), Positives = 214/471 (45%), Gaps = 31/471 (6%) Query: 1 MNILRAIFSLFI-VLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNL---INIDTL--KW 52 MN+ + +L + L GC V Y +P + + P F N+K L I+ D L +W Sbjct: 13 MNLTKLASALLLGSSLVGCAAVVKTPYEQPALNM-PGSFQ--NNKILSQQIHADLLADQW 69 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRADLFPSSYASISHRFI 109 W F + LN LV L QN + A + A+ S + + S HRF Sbjct: 70 WTLFKEPQLNNLVNEVLAQNTDLAVAGISLQQARIQARQAQSQQGVRVGDARISTGHRFS 129 Query: 110 PNLKTNST-----GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--NVISKLIP 162 + +S+ G +++DLFG+ + ++ A ++ ++ D+ ++I Sbjct: 130 LDGGGDSSTGLSLGYPGLSYELDLFGKLAN-QTEAARWEALASEEDLQATAQSLIGTTAQ 188 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + ER S+ Q L +K +L +++ GA S L L + E I+S ++ + + Sbjct: 189 LYWQLAYLNERYSVVQQNLATAQKTYDLVRVQYRAGAVSGLDLTQAEQAIQSQQATLSQI 248 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 + ++ LL P + + Q + PN+ +P I +PA L+ RPD+R Sbjct: 249 AQQRVETRTGLAVLLHMP----VQQLAIQEPSRLPNIQLPSIQADLPASLLSRRPDLRAT 304 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDK 337 E +L ++A K+ YPS+SL G++ +S N + G L LP Sbjct: 305 ELRLRKALANKDANKASYYPSISLTGNLTTGIGSSTSLSNALKNPVATLGAGLTLPFLQW 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 +K +++ E ++ + +++T+ A +VENAL++ E K V Q VEL +++ Sbjct: 365 NDMKRDLQVNELEYEKAIMQYRQTMYEAFADVENALSNRTELTKQVALQQRNVELAERTE 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L+ + YR G +L ++LD + T + L ++ +YV L A+G Sbjct: 425 RLTEVRYRNGAVALKNLLDAQETTRNARLSLVQTRQNQYNAYVTLMQALGG 475 >gi|325920337|ref|ZP_08182274.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325549199|gb|EGD20116.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 496 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 114/478 (23%), Positives = 217/478 (45%), Gaps = 48/478 (10%) Query: 16 AGCTVGPEYTK-PHMPLLPTQFSI----GNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC +GP YTK P + Q S ++ ++ WWE +D L +LV AL Sbjct: 18 GGCMLGPNYTKAPVVADAAMQASALHRASGAEVVVAAPLNHWWEELHDPMLTQLVTQALA 77 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNSTGQL-------- 120 + + A R+ A + RA+ P AS + + P ++ G+L Sbjct: 78 DSPNLRAAQARLLANRALARQRRAERLPKLNASALYAYAEPPQTIVDTLGELQNGENSQP 137 Query: 121 --------------------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISK 159 D+ W++DLFG+RR E +LA ++ A++ A++ + ++ Sbjct: 138 PAAGEEEASLDKTQIYSVGFDASWELDLFGRRRRAAEGALAQAQASEAELADAQVQLAAE 197 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y++ R + R++IA LD + + L+ + QGA S L + ++ +++ ++ Sbjct: 198 VGQVYLNYRGLQARLAIADANLDKIGQTLRLTQQRREQGAASDLQVEQIATQVQQQQAQR 257 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPD 277 L+ + + ++ ++G + Q + QP +P + + LIR RPD Sbjct: 258 LPLDLQSQEALDQLALMVGRAP----GALDTQLSTAQPLPMLPTQVRVDDAGALIRRRPD 313 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-YNTHWSFG---PKLYLP 333 +R E++LA S A+IG A + +P ++L G ++ + PG +N+ P L Sbjct: 314 VRKAERELAASSAQIGEALNGYFPQVTLLGGLSWVAGS--PGDFNSDALTTLAVPMLRWS 371 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ K+ + +A + + ++ VL A+++ +AL +K + + A Sbjct: 372 IFDFGRTKAQVAQARAGNAGREAAYEGAVLAALQDANSALARFGSARKQLVVARQAEASA 431 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S L G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 432 TRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|332524472|ref|ZP_08400681.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] gi|332107790|gb|EGJ09014.1| RND efflux system outer membrane lipoprotein [Rubrivivax benzoatilyticus JA2] Length = 466 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 109/432 (25%), Positives = 193/432 (44%), Gaps = 18/432 (4%) Query: 30 PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQA---TERINAAK 86 P LP +S + + + D WW F D L LV AL NL + A ER A + Sbjct: 37 PTLPAGWSRAPAGAVHDGD---WWAGFGDPLLLALVDEALATNLDLASARANVERARAQR 93 Query: 87 ENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY 146 + + R SS + R N + LD+ W+ D FG ++ A +A Sbjct: 94 DLADAGRLPQLGSSASGGRVRSGENYSRQLSAGLDASWEPDFFGANASTATAAAADFAAA 153 Query: 147 AQ-VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 + +L V ++ +Y+ R +E+ +IA + + ++L + G S + Sbjct: 154 GATLQATRLAVAAETAIAYLQWRGTREQYAIARESAASQAQTLQLVQWRVQAGLASAVDA 213 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPAT--EFLHYMQKQSNNFQPNLYIP 262 + A ++ + +P L+ + + + ++ LLG PAT E L + + + Q Sbjct: 214 EQARASLEQTRAQLPALQTTLQQTENALAILLGRAPATLGERLATAPEAAPSLQA----- 268 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPG 319 + G+PADL+R RPD+ E +A ++A + ++D P LSL+GS+AL T Sbjct: 269 LPAGVPADLLRRRPDLLAAEWTVASALATLDARRADRLPDLSLSGSLALRAATWSGLGGA 328 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 S + P+FD G ++ + +++ +++ VL A+ +VE+ L +++ Sbjct: 329 GAVAASVLAGISWPVFDGGAARARVEAQQATLDAARASYRAAVLAALGDVEDNLVALDRG 388 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + V L+ A E + L+ YR G +LD ER+ L+ A+ LA + Sbjct: 389 GERVAALERAAEAAANAAELARARYRSGLIDFGTLLDAERSLLSARSSLAGARTDLALAG 448 Query: 440 VDLYIAIGSGYN 451 V LY +G G+ Sbjct: 449 VRLYKGLGGGWT 460 >gi|299139396|ref|ZP_07032571.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298598665|gb|EFI54828.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 502 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 117/474 (24%), Positives = 212/474 (44%), Gaps = 44/474 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPT------QFSIGNS--KNLINIDTL---KWWESFNDTS 60 I+LL GC VGP+Y P + P Q + S K D KWWE + + Sbjct: 24 ILLLQGCRVGPKYIPPVVQAPPAFKEVAPQVAADGSTWKPATPQDATLRGKWWEIYQEPE 83 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFI 109 LN L N I Q+ + AA+ + RA P+ + A+ + + Sbjct: 84 LNALEDKLNISNQNIAQSFQNFMAARAQVRQARASYSPTVTTTPAYTRARASANEGSQGL 143 Query: 110 PNLKTNSTG---QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSY 164 N+ NS D W+ D++G+ R+ AN A D+A +L + L Y Sbjct: 144 SNVNLNSNDFNLPFDVSWEPDVWGRIRNTVREYANAAQVSA-ADLANERLTEQANLAVDY 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R E I++ Q ++ +++++L+ + T G ++ + E +++ E+ L Sbjct: 203 FEIRGQDELIALYQQSIEAERQSLKLTQVLRTTGIDDDQAIAQAELNLRTAEATATNLGV 262 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 + H I+ LLG PA+ F ++ + +P I +G+P++L++ RPDI E+ Sbjct: 263 ARAQYEHAIALLLGEPASTFSIPVRSLTTE------VPAIPVGVPSELLQRRPDIAAAER 316 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ + A IG+ + YPS SL+ L T N F + +S GP +FD G Sbjct: 317 TMSQANALIGVETAAFYPSFSLSAEGGLQSSTIGNWFAWPSRFFSVGPSASQTLFDAGLR 376 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ I + ++ +++TVL A ++ E+ L S+ + + Q A+ ++ L+ Sbjct: 377 RATIAQYQAQYDGDVAAYRQTVLTAFQQTEDYLASLRILTQQRQQQQQAITAAQRYYDLA 436 Query: 401 MINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G + L++ + + + V L + Q S V L A+G G++ Sbjct: 437 DVRYRTGVDTYLNVFTAQTTLLSNQQTAVTLHV---QQVTSSVQLIEALGGGWD 487 >gi|92118764|ref|YP_578493.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] gi|91801658|gb|ABE64033.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] Length = 509 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 114/470 (24%), Positives = 208/470 (44%), Gaps = 47/470 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------KWWESFNDTSLNKLVK 66 L GC VGP++ KP P +++ + + + + +WWE F +LN++V+ Sbjct: 40 LTGCAVGPDF-KPQAPPDTSRYLSDPAGDRVPGHPIVHNAEIPPQWWELFRSPALNRIVE 98 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNS--- 116 ++ N + A + A+ N L R LFPS + ++ + L++ + Sbjct: 99 DGIEHNSDLAAAEAAVRVAQANALVQRGALFPSVAGNFDSTRQQVAVQLSSPLESGANIF 158 Query: 117 ---TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TGQ+ + D++G RR +ES+ A + Q + L + S + + I+ + Sbjct: 159 NLHTGQVTVSYIADVWGGTRRMVESADAQAEMRAFQREGVYLTLASNIALAAIEEGRLRG 218 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +I+ +++ L + + L + QG + + E + +P LEK H Sbjct: 219 QIAATRRVIGLQSEVLRLLKRQQEQGQIALTDVAAQETAVAQTRLLLPPLEKQLAQQRHL 278 Query: 233 ISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +S L G P F +F+ +P+++ PADL+R RPDIR E L Sbjct: 279 LSFLTGRLSSDAPGETF------NLGSFRMPRRLPLSL--PADLVRQRPDIRAAEANLHA 330 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG+A ++ P +SL G++ + PG W IFD G +++ Sbjct: 331 TNATIGVAIANRLPQISLTGNVGAAATRFTELATPGAGL-WMLAGNAAQTIFDAGALENK 389 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 R AE + ++ TVL A + V + L ++ + ++ A +S++L Sbjct: 390 QRAAEEETNQSLAQYRSTVLAAFQNVADVLRALQAGTRAISAATDAERSASESIALVRKQ 449 Query: 404 YRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 QG+ S+ +L ++A T+ +D A QLA + V L+ A+G G+ Sbjct: 450 VDQGQISVPLLLAAQQAYLQTSLARLDAQAA--QLANT-VALFQALGGGW 496 >gi|218264008|ref|ZP_03477931.1| hypothetical protein PRABACTJOHN_03621 [Parabacteroides johnsonii DSM 18315] gi|218222353|gb|EEC95003.1| hypothetical protein PRABACTJOHN_03621 [Parabacteroides johnsonii DSM 18315] Length = 455 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 221/463 (47%), Gaps = 35/463 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNKL 64 I+ V+L GC++ Y +P + ++ + + I + + +I L W E F D L KL Sbjct: 6 IYICLSVVLGGCSIYRPYKRPDVAVVDSLYRRQISPADSAASIADLSWKELFTDPQLQKL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ L+ N + A R+ A+ + S R PS +IS + KT T L Sbjct: 66 IERGLRNNSDLGIARLRVKEAEALLKSARLSYLPSVNLSPQGTISK--AEHGKTTKTYDL 123 Query: 121 --DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W+ID+FG+ + + + A L+ + A + +I+ + +Y E+++I+ Sbjct: 124 AASASWEIDIFGKLTNAKREARAVLEQSEAYRQAVQTQLIATIANNYYTLLMLDEQLNIS 183 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + + +N+ + G T+ +++ + EA S+++ + +LE+ + +S+LL Sbjct: 184 RRTAENWNENLRVMKALKRAGQTTDMAVAQTEAGKLSVDASLLSLERQITELENTLSSLL 243 Query: 238 GYPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G + + + QS F L + G+P L++ RPD+R E LA + A+ Sbjct: 244 GSASGDITRSTLSGQS--FPDTLLV----GVPLQLLQRRPDVRQSEAALAAAFYVTNRAR 297 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYN-THWSFGP--KLYLPIFDKGKIKSNIRRAESSAQE 353 S +PS++L+GS T+ N W F L P+F++G+ +N++ A++ +E Sbjct: 298 SAFFPSITLSGSAGWTNAAGAAITNPGQWLFSAVGSLIQPLFNRGQNIANLKVAKAQQEE 357 Query: 354 QYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++++++L+A EV NAL + D++ V L AV + M S NY Sbjct: 358 ALLSFRQSLLDAGTEVNNALVQWQTARGRLKLDEQQVVALTSAVRSAELLMKHSSQNY-- 415 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L + + E+D + + + ++LY ++G G Sbjct: 416 -----LEVLTARQTLLQAELDAASDRFDEIQGVINLYRSLGGG 453 >gi|264678254|ref|YP_003278161.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262208767|gb|ACY32865.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 480 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 21/382 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L+ LV+ A + N + A R+ A+ + S A P AS Sbjct: 65 WWRVFADAELSALVERAGEANTDVQTAAARLAEARALLRSADAQRQPQIGASGGAVRQAG 124 Query: 112 LKTNS--------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L T + T L+ ++ DLFG+ R E++ + ++ A + +L V + + Sbjct: 125 LNTANGLQPATLVTAGLNLSYEADLFGRLSRASEAAREDANAREALLQSTRLMVQADVAQ 184 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + + Q L Y++ + L +F G ++L + +++ E+ + E++ L Sbjct: 185 TYLQLRSLQTERQLVEQSLAAYRETLMLIEKRFRAGDAAELDVARMQTEVSATEAETLAL 244 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIP-INIGIPADLIRNRPDIRY 280 E+ H ++ L+G AT F + QP L +P I G+PA ++ RPD+ Sbjct: 245 ERQQAALTHALAVLVGDVATGF-------TLAAQPVLAALPVIPAGVPATVLARRPDVSA 297 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + + + A++G+A++ +P+++L G+ + F W G L LPIFD Sbjct: 298 AQASVLAAQARVGVAQAAWFPAITLTGNGGYASPELGDLFKWSARSWGIGALLSLPIFDG 357 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + A + + + VL A +EVE+ L+++ L AV+ +++ Sbjct: 358 GQRAAQEEGARARLEAAVAAQRGQVLAAFREVEDQLSALRLLSGQAHVLGQAVQSSERAT 417 Query: 398 SLSMINYRQGRYSLLDILDIER 419 LS + YR G S L++LD R Sbjct: 418 HLSDVRYRNGLVSQLELLDARR 439 >gi|300772824|ref|ZP_07082694.1| FusA/NodT family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761127|gb|EFK57953.1| FusA/NodT family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] Length = 490 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 109/479 (22%), Positives = 219/479 (45%), Gaps = 53/479 (11%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++ C +G +YT+P + L P Q+ ++ + I + W E F+D++L L+ AL Sbjct: 21 VVQSCKIGEKYTRPDLNL-PEQYRSDTLDYFGDTTTISRIPWREFFHDSTLLALIDSALI 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHR----------FIPNLKTNSTGQL 120 N + A A ++ +A+ PS A++++ P+ + Q Sbjct: 80 NNFDMRTALLNTRIANRQVIQNKANYLPSVEATLANANRQWRSSDFGSGPSSRWYDKKQK 139 Query: 121 DS-----------------DWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIP 162 D+ W++D++G+ ++ L A Y + + N+IS + Sbjct: 140 DAPDDMFVYLSQFGTEVRFSWELDVWGKISSQQNQLLAQYLDTYEAKNAIQTNLISSIAK 199 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + ++I +A + + L + + L++ G + L++ + E++ S +P L Sbjct: 200 GYFNLLMLDDKIRVAKRNVQLNDSTLRMIRLQYEAGEITALAIQQTESQRLVAASLVPEL 259 Query: 223 EKSFRMNVHNISTLLGY------PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 EK + + + TL G F H + + I++G P +++RNRP Sbjct: 260 EKEIAVQENALRTLTGQMPDRIQRGQSFEHLIAENQE---------ISLGSPLEIVRNRP 310 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF--PGYNTHWSFGPKLY 331 DIR E +L + A + ++ YP+LS+ GS+ A+ N F PG G L Sbjct: 311 DIRSAEFQLISANAHTNVQQAMRYPALSIGGSLGVNAMLPKNWFNIPGALLGGISG-DLT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF +K+N A+ ++ + Q+TVL A+ EV N++ ++ + ++ + + V Sbjct: 370 APIFKNRTLKTNYEIAKLEREKAELALQQTVLEAVSEVSNSIITVEKQREQLEFAKKRVS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ + + +R G + L+++ + E+DL +++ +SYVDLY ++G G+ Sbjct: 430 NSELAVRNAGLLFRSGYATYLEVITAQSNALTSELDLVELRQKHLESYVDLYRSLGGGW 488 >gi|104783333|ref|YP_609831.1| multidrug/solvent efflux outer membrane protein TtgC [Pseudomonas entomophila L48] gi|95112320|emb|CAK17047.1| multidrug/solvent efflux outer membrane protein TtgC, RND family [Pseudomonas entomophila L48] Length = 481 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 107/471 (22%), Positives = 220/471 (46%), Gaps = 28/471 (5%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S N+ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQAPEAPVAAQWPQGPAYSPTESANVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP--- 110 F+D +L +LV+ +L+ N + A I+A + RADLFP S+ S S + +P Sbjct: 60 FHDPALQQLVQTSLENNRDLRVAALNIDAYRAQYRIQRADLFPAVSANGSGSRQRVPANM 119 Query: 111 ------NLKTNSTGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 N+ + + L S +++DLFG+ R + E +L S+ ++++++ + Sbjct: 120 SQTGEANITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQISLVASVAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + + L Y+++ L+ G S L L + ++ + Sbjct: 180 AYYTWQADQALLKLTEETLKTYEESYNLTRRSNEVGVASALDLSQARTAVEGARVKLSQY 239 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ ++++++ L+G L + + + G+P+D+++ RPDI+ E Sbjct: 240 QRLVAQDLNSLTVLVGTGVPANL----PKPLELNADQLAEVPAGLPSDILQRRPDIQEAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +PS+SL G+++ F G + W F P++ LPIF+ G Sbjct: 296 HLLKAANANIGAARAAFFPSISLTANAGTLSPDMGGLFKGGSGTWLFQPQINLPIFNAGS 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +K+++ ++ +++T+ A +EV + L + ++ + + V ++ L Sbjct: 356 LKASLDYSKIQKDINVAKYEKTIQTAFQEVADGLAARKTFEEQLQAQRDLVAANQDYYRL 415 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 416 AERRYRIGIDSNLTFLDAQRNLFSAQQALISDRLSQLVSEVNLYKALGGGW 466 >gi|124267322|ref|YP_001021326.1| putative outer membrane channel lipoprotein [Methylibium petroleiphilum PM1] gi|124260097|gb|ABM95091.1| putative outer membrane channel lipoprotein [Methylibium petroleiphilum PM1] Length = 483 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/419 (24%), Positives = 199/419 (47%), Gaps = 29/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHR 107 WW F+D + L+ A + N T+ QA R+ ++ + + +P+ + A S Sbjct: 67 WWSGFDDPQVAALIDAAQRANPTLAQAAARVAESRALAQAAGSSRWPTLDANASAVRSRS 126 Query: 108 FIP---NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 +P ++T S LD+ W+IDLFG R+ + ++ A D++ AQ A++++ +++ + Sbjct: 127 VLPPAGAIQTTSGATLDALWEIDLFGAVRQGVAAAEARADASRAQWHDARVSLAAEVAAT 186 Query: 164 YIDARH-------FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 Y+ R ++E + Q DL + + F A L+ + + Sbjct: 187 YVGLRSCEAVLAVYEEDAASLQQTADLVGQKV---RAGFDAPANGALARASAAEAVNRVA 243 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + E S R V +T PA + +++ QP+ + +PA ++ RP Sbjct: 244 AQQTECELSVRQLVQLTAT--SEPALRE-QLLPQRARLPQPSSFE--VAAVPAAVLSQRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKLYL 332 D+ E+ + + A++G A++D +P LSL+GSI + +F G T WSFGP L + Sbjct: 299 DLAAAERNIVAAAAEVGAAQADRFPRLSLSGSIGRASIRSGGQTFDG--TTWSFGPGLLM 356 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+FD G+ ++N+ A++ ++E L A++EVE AL ++ + + A + Sbjct: 357 PLFDGGRRRANVDAAQARYDGAMAAYRERALAAVREVEEALLRLDAAGRREADAERAAQG 416 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++ + ++ G SLLD+ RA + L +R+ ++V LY +G + Sbjct: 417 YGEFLAAAQTQWQVGVGSLLDLEQARRAALAADAGLIQVRRERVSAWVQLYKTVGGAWQ 475 >gi|237653378|ref|YP_002889692.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|237624625|gb|ACR01315.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 477 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 110/451 (24%), Positives = 205/451 (45%), Gaps = 37/451 (8%) Query: 24 YTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 + +P +P+ P Q + ++ ++ W E L+ L++ AL N + A E Sbjct: 30 FVRPDVPVPASWPRQAEVAQAEAAASLGVQPWREILPAPELHALIEEALAANADLRIAIE 89 Query: 81 RINAAKENILSVRADLFPS--SYASISHRFIPNL--KTNSTGQLD------SDWKIDLFG 130 RI A+ RA LFP + AS++ +P + N G+ W+IDL+G Sbjct: 90 RIELARAQYGVERAALFPGVDAAASVARERMPGFDPRANRIGENAVVGLSMPAWEIDLWG 149 Query: 131 Q-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 + E++ + ++ A D + ++++++ Y+D + I + LD +K + Sbjct: 150 RLAARSEAARREVLASAALADGVRTSLVAQVSSLYLDLLDLDAQHEITRRTLDGRRKALR 209 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ +F +G +S L + + E+ + E + + + ++ LLG + Sbjct: 210 LTRARFDEGVSSILDVRQAESLLAGSEQALADQARRIAQTENALAILLGRNPGPIARSAR 269 Query: 250 KQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN- 306 L P + G+PA+L++ RPDIR E+ L + A + A+ P ++L Sbjct: 270 LD------ELRTPARLEAGLPAELLQRRPDIRAAEQNLRAAGASVEAARKAFLPRITLTT 323 Query: 307 --GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ---EQYITWQET 361 G + F WS P L LP+FD G++++ + AE+ + EQY + T Sbjct: 324 LLGFASTDLGQLFDSDRYAWSLQPTLGLPLFDGGRLQAGVEVAEAQQRILVEQY---KAT 380 Query: 362 VLNAIKEVENALTS---INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + A +EV +AL + + E + +L HA +++ + +S Y G S +++D E Sbjct: 381 IRQAFREVADALVAFERLTEQRAATRRLVHA---NRERLRVSKARYLAGISSYFEVIDAE 437 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 R E+ L+ A R ++ V LY A+G G Sbjct: 438 RQLFDSELGLAQATRGAQQAVVQLYRALGGG 468 >gi|326387598|ref|ZP_08209204.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] gi|326207644|gb|EGD58455.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] Length = 445 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/420 (24%), Positives = 193/420 (45%), Gaps = 23/420 (5%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISH 106 + +WWE+ D L+ LV AL + T+ A RI A+ N+ + A P + AS + Sbjct: 27 SAQWWEALGDPILDDLVAKALSGSPTLAAAQARITQARANLAATNAAFTPKANVGASAAE 86 Query: 107 RFIPNLKTNSTGQL---------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 +P TN +L D+ W++DLFG RR E++ +D+A A A +++ Sbjct: 87 VALPGAFTNDKSRLSKQIYAENFDASWELDLFGANRRRSEAARDRMDAAQASAADAAVSL 146 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++++ +Y + R + ++ + +DL ++ ++ + +F G + + ++ + E Sbjct: 147 SAEVVRTYAELRVAQAHATLLDKQVDLDRRLLDHATQRFKLGTVGSQDVDEAKSALAQSE 206 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 SD + ++ L+G + + P L++P + IG PA L+R+ Sbjct: 207 SDTSDTGAQITVLADQLAVLIGREPGALDDLVAHPA----PPLHVPSTVAIGDPARLLRS 262 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKL 330 RPDIR E+++A + A +G +D +P ++ G + L D PG + P++ Sbjct: 263 RPDIRVAERQVAAANADVGAHIADRFPKVTFTGILGLGGTSVGDAFNPGSLVALAM-PQI 321 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 I D G+ + R A + E ++ TVL+A+++ E +LT + + K + Sbjct: 322 KWNILDGGRTVALKRNARGALVEAEAKYRGTVLDALEDAEASLTRFGSQRIALAKAAESR 381 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + L + + G S D L ER + ++ A L +V + A+G G+ Sbjct: 382 EAAEHLAGLQVQRAQGGTLSRADALKAERQALRAKMAEISAGGTLTSDFVAVEKALGLGW 441 >gi|221210943|ref|ZP_03583923.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221169899|gb|EEE02366.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 483 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 209/458 (45%), Gaps = 32/458 (6%) Query: 16 AGCTVGPE--YTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 AGC V P T P L P + + T WW F D +L++L+ L Sbjct: 22 AGCAVQPAQHATLPDAVGALAPATWDTAVPAAASDAAT--WWAQFRDPTLDRLIATVLDG 79 Query: 72 NLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP---NLKTNSTGQLDSDW 124 NL + A ER+ A+ S RA L P +++AS + + +P + L W Sbjct: 80 NLDLQAAAERVKQAQALTASKRAALLPELDATAHASDARQNVPPPLGYVRQAGAGLALSW 139 Query: 125 KIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 D+FG +R + ++ A L D +L + + +Y+D R ++ + + + Sbjct: 140 SPDVFGGERLDLLAARAELVGQTHAEDAMRLALAADAASAYVDLRWAQQELKLLQDNAAI 199 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ +EL+ + G +++L + + + ++ ++E+ I ++ I+ G E Sbjct: 200 RQRALELTRKRQAFGLSTELDVTRAKNQLDALEARIAPTRAQIAHQLNLIAVYSGR-TPE 258 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + + P I +P+ + RPD+ ++ A++G+A ++ YP Sbjct: 259 SIDRLVLAESAPIPAPPAGAPITLPSQALLRRPDVLTAYAQVERRAAQVGVANAERYPKF 318 Query: 304 SLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 SLN G +A ++ DN F + S PIFD G+I ++I ++ES +E Sbjct: 319 SLNLADGVLAASYLGLPTLTDNLFSAALSATS-------PIFDAGRIAADIAQSESRLRE 371 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++T+L A++EVE+A S+ +L A+ ++++L+ Y+ G LD Sbjct: 372 SELALRQTMLQALREVEDARASLVATDAASQQLGSALAASDRALALATRLYKGGATDFLD 431 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + A + L+ A R+ A + + LY ++G G++ Sbjct: 432 VLTAQEAYLRDSDSLNQAAREHALAAIALYRSLGGGWS 469 >gi|295675174|ref|YP_003603698.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295435017|gb|ADG14187.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 526 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 117/461 (25%), Positives = 212/461 (45%), Gaps = 32/461 (6%) Query: 15 LAGCTVGPEYTKPH--MPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIAL 69 L CTVGP+Y KP P + K DTL WW + D SL+ L Sbjct: 40 LGACTVGPDYVKPAAVTPATWRELEGTGWKPAQPADTLTRGAWWRIYGDASLDALEPQVA 99 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG-------- 118 N + A R AA+ ++ R+ FP A + + R N+ ST Sbjct: 100 SANQDVQAAEARFRAARASVAQYRSQFFPVVTAGVQYSRTRSSENVLHKSTAGLALNDYL 159 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q+D+ W+ DL+G+ R +E + A ++ A +D A L++ ++L Y + R + + Sbjct: 160 VQVDASWEPDLWGRVSRSVEGAKAGAQASAADLDAALLSMQAELATDYFELRGLDQERRL 219 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + Y++ +EL+ ++ G + + + + ++K+ ++ L H + L Sbjct: 220 LDDTIKAYQEALELTQHRYAGGIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAVGIL 279 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPI--NIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 +G P + F + P + +P+ G+P+ L+ RPDI E+ +A A+IG+ Sbjct: 280 IGQPPSTF-------TLPVAPLVAVPVIAAAGVPSGLLERRPDIAAAERHVAAMNAQIGV 332 Query: 295 AKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A + +P+L L G A + + WS GP L + D G + +A + Sbjct: 333 ATAAFFPNLVLAVTGGLEATNYSQWLLAPSRLWSLGPTLAGTLLDFGGRAAVKEQARAHY 392 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E +++TVLNA +VE+ L ++ ++ AV ++++++ YR G + Sbjct: 393 DESVAQYRQTVLNAFGQVEDNLAALRVLEQEAAAQDDAVAAAQRALAVVSDRYRNGAITY 452 Query: 412 LDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 LD++ + T E + +SIA+R++A S V L A+G G++ Sbjct: 453 LDVVVAQTTTLTNERNAVSIARRRMAAS-VALVKALGGGWD 492 >gi|255034612|ref|YP_003085233.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254947368|gb|ACT92068.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 467 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 217/476 (45%), Gaps = 42/476 (8%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDT 59 NI+ A+ + LA CTVG Y +P++ P F + DT L W F + Sbjct: 4 NIIAAM--VLATTLASCTVGKRYERPNLEP-PAAFRAAMP---VTSDTVQLPWRTFFREP 57 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------------SSYAS 103 L L++ AL++N I A + I + R L P S S Sbjct: 58 QLVGLIEKALERNNDIAIALKNIEQMDLAVKQARLALLPTLNFSAGASRSWLSKNSLNGS 117 Query: 104 ISHRFIPNLKTNS-TGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLI 161 +S +F+ + L W++D++G+ + E+++AN + V K +IS++ Sbjct: 118 LSEQFVGTTYMDDYNASLQLSWEVDVWGKAKMQKEAAIANYFAQKENVSALKTRIISQVA 177 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY + +++ IA+Q + L +++ L+F G + L++ + EA+ K+ E IP Sbjct: 178 QSYYNLISLDQQLKIANQNIVLSDSTLDMMRLQFNAGQITSLAVDQAEAQKKTAELLIPL 237 Query: 222 LEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ + + +S L G YP + + SN + +PA L+ RPD++ Sbjct: 238 ALQNIAVQENALSILCGSYP--DAIQRAGDLSNAMPEETFAA---SVPAQLLSRRPDVKA 292 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIF 335 E + A+ G+AK+ +YP+LS++ +A N PG T + L PIF Sbjct: 293 AELAVVSLNAQTGLAKAAMYPALSISPQVAANSFNFNKWFDLPGSLTK-TLAANLTQPIF 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 K +K+ A ++ I +++T+++A+ EV +A+ + + + +Q + K Sbjct: 352 QKRALKTAYETAVVEQEKAVIQYKQTLMSAVGEVSDAMAKSSGASQRLELVQQKTAMLNK 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 + + Y+ G + L+++ + ++++ DL QL K + DLY A+G G Sbjct: 412 ATEDAQKLYKSGMANYLEVITAQ--NSRLQNDLEAINIQLEKLNAVTDLYRALGGG 465 >gi|161520903|ref|YP_001584330.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189352914|ref|YP_001948541.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160344953|gb|ABX18038.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189336936|dbj|BAG46005.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 482 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 214/463 (46%), Gaps = 45/463 (9%) Query: 18 CTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C++ P+ +P MP+ T + + N L W F D L +L+++AL N + Sbjct: 19 CSMAPKLVRPAMPVPGTYTAATAAATAQHANAADLGWRTMFGDRRLQRLIELALDNNRDL 78 Query: 76 LQATERINAAKENILSVRADLFPS--SYASISHRFIP-----------NLKTNSTGQLD- 121 A + AA+ R+ PS + AS + + P +++T + Sbjct: 79 RLAALNVQAAEAQYGIQRSARLPSIGAGASFTRQRTPANADMNPPVPESMQTQYGVNVGI 138 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS--- 175 S ++IDLFG+ + + D+A+A+ D + V L+ S +A +F ER++ Sbjct: 139 SAFEIDLFGRVKSLS------DAAFARYLATDHGRRAVQIALVGSVANA-YFAERLAQEQ 191 Query: 176 --IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++ + L+ ++++++L+ S + + + E ++ S +D+ ++ + + Sbjct: 192 RALSERTLNDWRQSLDLARRLKQANQASGVDIAQAEGQVASAAADLEARSRAVEQARNAL 251 Query: 234 STLLGYPATEFLHYM-QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G TE + + S QP L + G+P++L+ RPDIR E+ L + A I Sbjct: 252 RLLVG---TELPKDLPEPLSLERQPVL-TQLPAGLPSELLYRRPDIRQAEQALVAANADI 307 Query: 293 GIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +P LSL +I + F G + W+F P++ +PIF+ G++ + +R AE Sbjct: 308 GAARAAFFPRLSLTSTIGFLSPAMGSLFAGDHRTWAFAPQITVPIFEGGRLSAELRLAEI 367 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ + A +EV + L + + + V+ ++ L + YR G Sbjct: 368 RKSSAVAEYERAIQTAFREVADGLAGRETFSRQIDAQRDVVKSAERRTDLVNLRYRAGIE 427 Query: 410 SLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R A + +DL A+ + V LY A+G G Sbjct: 428 DRLELLDSQRQLYAARQALLDLRSAE---LSNAVALYKALGGG 467 >gi|171321233|ref|ZP_02910201.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171093495|gb|EDT38669.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 498 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 194/428 (45%), Gaps = 38/428 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHRF- 108 +WW F L++LV A + + T+ +A R++ A++N A L P A++S Sbjct: 77 RWWTQFGSEPLDRLVDTAWRNSPTLAEARARLDEARQNHAAQAGATLLPRVDANLSATRE 136 Query: 109 ------------IPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 +PN T + + +D+FG RR +E+ A +D +D A+ Sbjct: 137 KVDVVAFGLPANMPNPGPFTLYDASVSVSYALDVFGGNRRALEALRAQVDYQAYTLDAAR 196 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + ++ + I +++++ Q++D + + + +F G S+ + A + Sbjct: 197 LTLAGNVVATAILRASLAQQVALTRQLVDAQARQLRIVEARFAAGGVSRADVHAQRALLA 256 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-------PINIG 266 ++ +P L H ++ LLG P S + P+L + + + Sbjct: 257 QTQASLPPLAARHAQAGHRLAILLGAP----------PSGDALPDLVLDALALPRTLPVA 306 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTH 323 +P+ L R RPDIR E L + A +G+A ++LYP S++ I + G N Sbjct: 307 LPSTLARERPDIRAAEAVLHQASANVGVATANLYPRFSISAGIGSERTRIADIVSGLNV- 365 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+ G L P+F G++++ R AE++ + +++ETVL A+++V +A+ ++ D + Sbjct: 366 WNVGLGLTQPLFHGGELRARKRAAEAAYDAAFASYRETVLLALQQVADAMRAVEHDAAEL 425 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 A + S +++ Y G SL+D+LD +R + ++ + A+ L+ Sbjct: 426 QARDTAAQQAAASRAIAGDRYAAGGISLIDLLDAQRQVLQTALERTRAQADRLADTAALF 485 Query: 444 IAIGSGYN 451 A+ + Sbjct: 486 QALAGNWT 493 >gi|296389199|ref|ZP_06878674.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] Length = 472 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 10 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 68 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 69 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRGSGYSGTDATSDNDAVDS 128 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 129 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 189 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 249 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 304 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 305 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 365 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 424 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 425 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 462 >gi|116050332|ref|YP_790851.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|115585553|gb|ABJ11568.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] Length = 474 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 12 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 71 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRGSGYSGTDATSDNDAVDS 130 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 131 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 191 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 251 TLIGEP----VQALQVAERPFDSLRWPETGTGLPSELLSRRPDIANAEAQLAAAQADVQV 306 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 307 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 366 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 367 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 426 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 427 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 464 >gi|60280009|gb|AAX16351.1| PA2391 [Pseudomonas aeruginosa] Length = 472 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 10 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 68 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 69 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 128 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 129 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 189 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 249 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 304 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 305 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 365 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 424 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 425 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 462 >gi|299532188|ref|ZP_07045582.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298719850|gb|EFI60813.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 482 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 112/471 (23%), Positives = 212/471 (45%), Gaps = 42/471 (8%) Query: 11 FIVLLAGCTVGPEYTKP---HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 VL+AGC+V P T+ P +P +S + + + WW++F D L++ V++ Sbjct: 15 LAVLMAGCSV-PSLTRAPDSARPAVPASWSAERAADGASAVQTGWWQAFGDAQLSRWVEL 73 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----TGQ---- 119 AL +N +L A R+ A+ N+ D+ S+ A P S TGQ Sbjct: 74 ALARNNDVLTALARVEEARANL-----DVTGSAAAPQLSLSAPGSANRSLSARTGQMVHV 128 Query: 120 ------LDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L + W++DL+ + + + L ++ A D +L V + + +YI R + Sbjct: 129 RSAQPVLQASWELDLWDRLGSLSRAADKRLQASQADRDAVRLTVAATVAQAYIALRSLQA 188 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++++A + + + L + G S+L + AE++S+ + L + + Sbjct: 189 QLAVAEDTVKSREDALRLLTDQVRVGYISQLQQSQALAELESVRQSVQQLSLALQRQRIA 248 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNL---YIPI--NIGIPADLIRNRPDIRYQEKKLAD 287 + L+G + + + S + L +P G+P+ L+ RPDI + LA Sbjct: 249 LMQLVGGSGDDQAQALARSSLSAHAGLDSMSLPAMPAPGLPSGLLERRPDIARAQLLLAA 308 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIR 345 S + + ++ P +SL+ + N+ YN WS G + P+F+ G+++ Sbjct: 309 SDSNLTAQRAAFLPQVSLSANFGSLFINALD-YNPARVWSLGGSILAPLFNGGRLQGQFD 367 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 A + + ++ V+ A +VE AL S +++ + +HA E K +++ + Sbjct: 368 AASAQRDQAAYAYRGVVIKAFGDVETALVS---SQQLQAQWEHAKEREKVLGRTLGFAKD 424 Query: 403 NYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S L+ LD +R T + EV L + + QL ++ V LY A+G G+ Sbjct: 425 RYEAGYASYLEELDAQRNLFTVQQEV-LRLRQSQL-ENAVALYQALGGGWQ 473 >gi|160898810|ref|YP_001564392.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160364394|gb|ABX36007.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 489 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/432 (23%), Positives = 197/432 (45%), Gaps = 36/432 (8%) Query: 17 GCTVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 GC + P++ P MP+ +P Q + +L L W +S L +++ + Sbjct: 22 GCNLAPQHRTPDMPVPDTVGSTAAMPAQ---ADEASLQAAAALGWVQS---QQLREVIAL 75 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYAS------------ISHRFIPNLKTN 115 AL N + A E I A+ RADL PS A S ++ T Sbjct: 76 ALANNRDLRVAVESIERARAQYGITRADLLPSVNAQAQASRARTAAGMTSATQAASVSTQ 135 Query: 116 STGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 T QL + ++IDL+G+ R++ E++L + ++ +++ + ++ + R Sbjct: 136 YTAQLGFASYEIDLWGRVRNLSEAALQQFLQSEQNRRNVQIGLVADVANGWLTLAADQAR 195 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + L +K EL+ G+TS L L + + + + D+ + + + + Sbjct: 196 LQLARETLASREKAYELTRRMHEIGSTSGLVLAQNQTTVDTARGDVASFTSQVERDRNAL 255 Query: 234 STLLGYPATE-FLHYMQKQSNNFQPNLYI-PINIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G P + L + +P + P+ +P+ ++ RPDI+ E L A Sbjct: 256 QLLVGGPLPDALLPGAATLRADARPAAALQPVPAPLPSSVLLVRPDIQAAENNLRAMEAN 315 Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ ++P++SL S+ D F G ++ WSF P + LPIFD G+ ++ ++ AE Sbjct: 316 IGAARAAMFPTISLTASVGSGSRELDGLFGGSSSTWSFIPLVRLPIFDGGRNRAGVQVAE 375 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + +++ V A +E + L + D+++ + V +K+ LS ++ G Sbjct: 376 ANQRIAIAQYEKAVQTAFRETADVLADRAQWDERLAAQTSM-VAATQKAFDLSEARFKAG 434 Query: 408 RYSLLDILDIER 419 + L +LD +R Sbjct: 435 VDNYLTVLDAQR 446 >gi|253996259|ref|YP_003048323.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera mobilis JLW8] gi|253982938|gb|ACT47796.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera mobilis JLW8] Length = 480 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 118/474 (24%), Positives = 223/474 (47%), Gaps = 34/474 (7%) Query: 3 ILRAIFSLFIVL-LAGC--TVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFN 57 +++ +F L L L GC V P+Y +P + P + S ++N I D WW + Sbjct: 9 LIKPVFYLVGSLVLTGCQSMVWPDYLRPQVATPDRYVELSQNAAQNQIAND---WWTLYQ 65 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASIS 105 D +LN L+ AL+ N I A I A + L PS + A Sbjct: 66 DETLNTLIANALKHNTDIKAAVANIEQADAVMKEAGTFLIPSVNLDGAGTRSRVTEAGAF 125 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPS 163 F N + N +L + +++D +G+ R ES+ A+ L S YA+ D L++ + Sbjct: 126 PVFSANPRNNFNIKLGTTFELDFWGKLGRAKESARASALSSRYAK-DTVTLSLTGLVASQ 184 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ R +++I IA Q L ++ L+ + G S L + + E ++ + I L+ Sbjct: 185 YLTLRSLEKQIQIAEQNLVSRDASLALTKRRLEGGIVSALDVHQAEVANTNLRAQIADLK 244 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIR 279 + ++++ ++ L G Q +++ + +PI +G+P+ L+ +RPD+R Sbjct: 245 RLQSLSLNQLALLTGDLDLAVRGLGQTKADI----MALPIPPVPPLGLPSSLLESRPDVR 300 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+++ + A I +AK+ LYPS+SL G +L + W+ G L LPIF+ Sbjct: 301 QAEQQMVAANANIAVAKAALYPSISLTANWGGESLELKDILSSAARIWTGGLGLSLPIFN 360 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++ + + + + ++ T++ T+ A EV +AL S+ + + L + +K Sbjct: 361 GGRLNARVDQEAAKQKKTLATYERTIQTAFTEVNDALISLRQQTEREQSLLISQTSAQKM 420 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++LS Y+ G + +++LD +R + A++ + VDL+ +G G+ Sbjct: 421 LTLSENRYQSGYSAYIEVLDAQRTYNDASLAFVQARQARLIATVDLFKVLGGGW 474 >gi|332854098|ref|ZP_08435168.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013150] gi|332866901|ref|ZP_08437255.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013113] gi|332728205|gb|EGJ59590.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013150] gi|332734360|gb|EGJ65485.1| outer membrane efflux protein OprM [Acinetobacter baumannii 6013113] Length = 440 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 102/433 (23%), Positives = 207/433 (47%), Gaps = 23/433 (5%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 +P FS +S I + K E +D L ++++I+L N + AT I ++ Sbjct: 12 IPQNFSQNHSGKTIAEKSYK--EFISDPKLVQVIEISLNNNRDLRTATLNIERVQQQYQI 69 Query: 92 VRADLFPS------SYASISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANL 142 + P+ + +S PN + T G + +++D +G+ +++ +++L N Sbjct: 70 TKNSQLPTIGVTGNAVRQVSPSINPNNPVSTFQVGLGMTAYELDFWGRVQNLKDAALNNY 129 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + + + ++++IS + +++ + +++A Q L L+ +F G S+ Sbjct: 130 LATQSAKEAVQISLISNITQVWLNYAFAQANLNLAEQTLKAQVDAYNLNKKRFDVGIDSE 189 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL---HYMQKQSNNFQPNL 259 + L + + +++ +D+ T + + + + L G+P + L H +Q + F+ N Sbjct: 190 VPLKQAQISVETARNDVATYKTQIQQAKNLLDLLAGHPVPQNLLPNHAIQNIT--FEKNF 247 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NS 316 G+P+DL+ +RPD++ E +L + A IG AK+ ++P++SL GS + Sbjct: 248 AA----GLPSDLLNHRPDLKAAEYELRAAGANIGAAKARMFPTISLTGSTGYASSELKDL 303 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F N WS GP + LPIFD G K+NI+ AE+ + +++ + +A +EV +AL + Sbjct: 304 FKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAETDQKIALAKYEKAIQSAFREVNDALATH 363 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 + + + V + LSM YR G S +LD +R+ + L ++ Sbjct: 364 AHIGERLDAQRRLVSATAATYKLSMARYRAGVDSYFTVLDAQRSAYAAQQGLLALEQMEL 423 Query: 437 KSYVDLYIAIGSG 449 + ++LY +G G Sbjct: 424 NNQIELYKVLGGG 436 >gi|167839386|ref|ZP_02466070.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 486 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 112/486 (23%), Positives = 215/486 (44%), Gaps = 63/486 (12%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----------------LKWWE 54 F L GCTVGP++ P P + T ++ + + T WW Sbjct: 10 FAFALCGCTVGPDFRPPAPPDVST-----YAREALPVTTRAANAAQTLAAAPAALPAWWT 64 Query: 55 SFNDTSLNKLVKIALQQNLT---------------ILQATERINAAKENILS-VRADLFP 98 F +LN+LV ALQ++ T I QA + A + LS R + P Sbjct: 65 RFRSDALNRLVDTALQRSPTLDAARARLAEAREDYIAQAGASLFTAIDARLSGARQKVDP 124 Query: 99 SSYASISHRFIPNLK-----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 +++ IPN+ T + + +D FG RR +E+ LA +D ++ A Sbjct: 125 AAFG------IPNVPKPGPFTLLNASVSVSYALDAFGGNRRALEALLAQVDFRAYELQAA 178 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L + ++ + I + +I++ +++D + + + ++ G ++L + + Sbjct: 179 RLTLAGNVVSTAIRRASLQRQIALTQRLIDAQAQQLAIVEARYAAGGVARLDVRAQRTLL 238 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 + +P L H ++ LLG P+ + + L++P + + + + Sbjct: 239 AQTRASLPALTTQLAQADHLLAILLGAAPSKADFGDLAFDA------LHLPDTVPVTLAS 292 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 L R RPDIR E L + A +G+A ++LYP ++ GS + G N W+ Sbjct: 293 TLARERPDIRASEALLHQASANVGVATANLYPQFVISASAGSQRTRMADIVDGMNI-WNI 351 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G L PIF G++++ R A+++ + ++++TVL A+++V +AL ++ +D + + Sbjct: 352 GLNLTQPIFHGGELRAKRRAAQAAYDAAFASYRQTVLQALQQVADALDALKDDAQALDAR 411 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A + S+ ++ Y G SL +LD +R ++ +D + A+ L+ A+ Sbjct: 412 DAAALEAQASVEIAQARYAAGGVSLFGLLDAQRQASQTALDRTRAQADRLADTAALFQAL 471 Query: 447 GSGYNP 452 G G P Sbjct: 472 G-GMTP 476 >gi|60279991|gb|AAX16334.1| PA2391 [Pseudomonas aeruginosa] Length = 472 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 10 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 68 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 69 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 128 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 129 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 188 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 189 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 248 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 249 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLGRRPDIANAEAQLAAAQADVQV 304 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 305 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 364 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 365 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 424 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 425 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 462 >gi|167899431|ref|ZP_02486832.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 417 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 109/427 (25%), Positives = 201/427 (47%), Gaps = 37/427 (8%) Query: 30 PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI 89 P P + G+ ++ L W F D L L++ AL N + A +R+ A+ Sbjct: 2 PAYPGEPGAGSR----TLEQLGWRAYFVDPRLQALIETALANNRDLRIAAQRVEQARAAY 57 Query: 90 LSVRADLFPSSYASISH-RFI-PN---LKTNSTGQLDS------DWKIDLFGQRRHIESS 138 RAD +P+ A+ ++ RF P L + G+L S W+ID +G+ R +++ Sbjct: 58 GIRRADQYPTIAANAAYLRFREPGGLLLPSPIIGELYSASLSEVQWEIDFWGRVRSLKA- 116 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDAR----HFKERISIAHQILDLYKKNIELSHLK 194 A LD+ A D ++ V LI DA + ER+++ ++ + + ++ + + Sbjct: 117 -AALDTFLAS-DASRRAVTVSLIGQVADAYLALCAYDERLALTNETIASRRDSLRIFRRR 174 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 + +GA SKL L + E ++ ++ L+++ + H + L+G A ++ Sbjct: 175 YEEGAISKLDLTQSEILLQQAQTLGSQLQQARDVQQHALDLLVGTNAAARTPASLDDAS- 233 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 P+L P G+P++L+ NRPD+ E +L + A IG A++ +P ++L SI Sbjct: 234 IAPDL-AP---GLPSELLANRPDVVAAEYQLRAAHANIGAARAAFFPRIALTSSIGTGST 289 Query: 315 ---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 N F W+F P L +PIFD G+ N++ A + E +++T+ A ++V + Sbjct: 290 ELHNLFASGTAAWNFIPNLSVPIFDAGRNIGNLKLANARRDEALAQYEKTIQTAFRDVAD 349 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 AL + + V Q + + L+ + Y G L++LD +R DL A Sbjct: 350 ALAARHWLADQVRIAQETLATQAERARLAKLRYDSGAARFLEVLDAQR-------DLLNA 402 Query: 432 KRQLAKS 438 ++QL ++ Sbjct: 403 QQQLVQT 409 >gi|88802063|ref|ZP_01117591.1| RND efflux system, outer membrane lipoprotein, NodT [Polaribacter irgensii 23-P] gi|88782721|gb|EAR13898.1| RND efflux system, outer membrane lipoprotein, NodT [Polaribacter irgensii 23-P] Length = 483 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 107/479 (22%), Positives = 215/479 (44%), Gaps = 47/479 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F + +L C G + ++P Q+ G + +N T+KW + F D++L L+ Sbjct: 16 LFVSILTILYSCVPGKAIIRAESKIVPEQYK-GQIIDTVNDVTVKWKDFFKDSNLEGLIH 74 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASI---------------------- 104 AL N + + +N A+ I + + + P Y +I Sbjct: 75 TALTNNQELNIMLQHMNIAQNEIQAKKGEYVP--YVNIYLGAEVEKVGEYTRNGAIEKNL 132 Query: 105 ---SHRFIPNLKTNSTGQLDSDWKIDLF-----GQRRHIESSLANLDSAYAQVDIAKLNV 156 R P N TG L + W+ID++ G++ + LA+++ + K + Sbjct: 133 NIREGRAFPEPLKNFTGGLSASWEIDIWKKLRNGKKAAVLEYLASVEG----IQFMKTQL 188 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ Y + ++ I Q L + + + + L+ T++L++ + EAE+ + Sbjct: 189 IAEIASVYYELITLDNQLEIIDQNLSIQQNALRMVKLQKEAARTTQLAVRRFEAEVLKNQ 248 Query: 217 SDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 S+ + + N + I+ L+G YP + + SN+F + GIP L+ NR Sbjct: 249 SNKYQVRQKIVENENKINFLVGRYP-----QAVLRNSNDFITKAIDSVAAGIPLQLLENR 303 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLY 331 PDIR E +L+ S + IAK++ YP++ + ++ L + NT ++ + Sbjct: 304 PDIRRAELELSASKLNVKIAKANFYPTIDIKANMGLEAFKTTFLKNTPESLLYALAGDVV 363 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+ ++ IK+ + A S + +++T+L A EV N L++I +K + V+ Sbjct: 364 SPLINRNGIKAAYKNANSKQLQAVFEYEKTILTAYLEVSNQLSNIKNLQKSFELKEKQVQ 423 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 K+S+ LS+ ++ + ++L +R +++ KR + V LY ++G G+ Sbjct: 424 ALKESIDLSIQLFKSAKAEYTEVLLTQREVLDARLEIIETKRDQLLANVKLYQSLGGGW 482 >gi|78186679|ref|YP_374722.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium luteolum DSM 273] gi|78166581|gb|ABB23679.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium luteolum DSM 273] Length = 476 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 106/461 (22%), Positives = 220/461 (47%), Gaps = 34/461 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVKIALQQNL 73 GC + +P L G++ ++ + + L + F D++L LV A++ NL Sbjct: 25 GGCGASGRFHRPDAALPAAYRGDGSAASMADTSVALLPYNRFFRDSTLVGLVDRAVEGNL 84 Query: 74 TILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLD-------- 121 + A + I+ A++ + S R + P AS S L ++G Sbjct: 85 DLQVALKNIDYARQTLNSARLGVLPEVSLGVSASSSRPSDNGLNAVTSGDKTVEAFTASG 144 Query: 122 -SDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++D++G+ R +S+LA+ L +A A + + +++ + +Y F ++ + Sbjct: 145 RASWEVDIWGRIRSRRKSALASYLKTAEAARAV-RTRLVADVADTYYSLLLFDAQLESSR 203 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L L + + L++ G + L++ + +A +SI +P LE+ + +S L G Sbjct: 204 RNLALADTTLTMIRLQYDAGLVTSLAVQQQDAARQSIALRVPELERQVAAAENALSILCG 263 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 PA+ +++ F+ + + G+PA L+ NRPD++ E L + + A+S Sbjct: 264 TMPAS-----VRRGEPLFRTAIRDDLPAGVPAALLENRPDVKGAEMALRAAYQDVEAARS 318 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNIRRAESSAQE 353 LYPS++L L + + T S G + P+F +GK+++ +R+A+ + Sbjct: 319 SLYPSITLTAEGGLNALRASDWFTTPGSLFGLVGGAVLQPVFQQGKLQALLRQAKIRNLQ 378 Query: 354 QYITWQETVLNAIKEVENALTS---INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++++VL A+ EV +AL + I E + I + A L + SM+ ++ G + Sbjct: 379 AELAFRQSVLRAVGEVSDALVALRKIQEGETIAAR--RAASLETAVSNASML-FKSGLAT 435 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+++ E + + E++L+ +R+ + +LY A+G G+ Sbjct: 436 YLEVMQAEESALQAELELADIRRRHLSAMAELYRALGGGWR 476 >gi|332829648|gb|EGK02294.1| hypothetical protein HMPREF9455_01564 [Dysgonomonas gadei ATCC BAA-286] Length = 469 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/451 (23%), Positives = 206/451 (45%), Gaps = 26/451 (5%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C V +Y P P + S + I W E F DT L L+ +Q N + Sbjct: 24 CGVMNKYKTPQ-PDSKNLYGEMTSSDTTTIANKPWKEYFTDTYLVTLIDEGIQNNFDLQI 82 Query: 78 ATERINAAKENILSVRADLFP--SSYASISHRFIPNLK----------TNSTGQLDSDWK 125 A RI A+ ++ +A FP S ++H N + T+ T + + W+ Sbjct: 83 AYTRIQQAEASLGMAKAAYFPDVSLVGQVNHSRSSNGQNGKDVLRYHSTDYTLGVSASWE 142 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D++G+ R ++ A S+YA ++ + ++I+ + SY E+++I + + L Sbjct: 143 LDIWGKLNRQSKAKYAQFLSSYAYKNLIQTSLIANIATSYYSLLALDEKLAITVETIKLL 202 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATE 243 ++N+E G + ++ + +A + S ++ +P LE R ++I TLLG P T Sbjct: 203 EENVETMEALKKSGLQNGAAVEQSKALLYSTQTSVPDLESQIRELENSICTLLGRKPGTI 262 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + Q Q + G+PA ++ RPD++ E + A++ YPS+ Sbjct: 263 TRSAIHSQQYPLQ------LEYGVPAQMLAKRPDVQQAELSFRSAFELTNAAQASFYPSI 316 Query: 304 SLN-GSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +L+ G+I +N+ + N S L PIF K ++ N++ A++ QE +T+ Sbjct: 317 TLSSGTIGFGTNNTLSNFFKPENIFASIIGGLTQPIFAKKQLTGNLKIAKAQQQEALLTF 376 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++TVL+A +EV + L S K + +E + S+ + + G + ++L+ E Sbjct: 377 EQTVLSAGQEVTDILFSFESSLKKNETREKQIEACQNSVYFTNELLKAGDANYTEVLNAE 436 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +++ K + + V+LY A+G G Sbjct: 437 QNLLSAQLNRVNDKLEQLQYSVNLYKALGGG 467 >gi|237716522|ref|ZP_04547003.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405301|ref|ZP_06081851.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643153|ref|ZP_06720983.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294808119|ref|ZP_06766889.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|301308329|ref|ZP_07214283.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] gi|229442505|gb|EEO48296.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356176|gb|EEZ05266.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641498|gb|EFF59686.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294444678|gb|EFG13375.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|300833799|gb|EFK64415.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] Length = 453 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 104/454 (22%), Positives = 205/454 (45%), Gaps = 34/454 (7%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 +L GC Y +P + + ++ + + +L W E F D L L++ L +N Sbjct: 14 MLTGCGTYSRYHRPDLSMENLYSTLPADADTTTLASLSWREMFTDPKLQSLIETGLDRNT 73 Query: 74 TILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSDWKIDLF 129 + A R+ AA +L+ + PS + + KT + G S W++D+F Sbjct: 74 DLNVARLRVEAAASALLTAKLSYLPSLGLNAEGNAGKHDGATAKTYNAGATAS-WELDIF 132 Query: 130 GQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G + A L + + +++ + SY +++I+H+ L+ ++ + Sbjct: 133 GNLTAAKRGAAAALQGSRDYRQAVQTQLVATIADSYYTLAMLDAQMAISHRTLENWQTTV 192 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 G +++ +++ +A + +ES + ++ KS + + +L P+ H + Sbjct: 193 RTLEALKKAGQSNEAGVLQAKANVMQLESSLLSIRKSISETENALFAILAMPS----HSI 248 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 + SN + ++IG+P L+ NRPD+R E +LA + A++ YP ++L+G+ Sbjct: 249 AR-SNLVEAAFPDTVSIGVPLQLLSNRPDVRQAEMELAQAFYTTNAARAAFYPHITLSGT 307 Query: 309 IALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 + T++ PG W L P+F++G +N++ A+ +E + +Q ++ Sbjct: 308 LGWTNNGGGIITNPG---QWLLNAIGSLTQPLFNRGANIANLKTAQIRQEEAKLLFQHSL 364 Query: 363 LNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 LNA KEV +ALT+ K + V L AV + M S I Y L++L Sbjct: 365 LNAGKEVNDALTAWQTAKSQLEINARQVETLCDAVRKTESLMRHSNITY-------LEVL 417 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++ + EV + + +S + LY A+G G Sbjct: 418 TAQQSLLEAEVQQLQTRFERIQSVIKLYHALGGG 451 >gi|116695719|ref|YP_841295.1| outer membrane protein [Ralstonia eutropha H16] gi|113530218|emb|CAJ96565.1| outer membrane protein [Ralstonia eutropha H16] Length = 492 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 109/462 (23%), Positives = 212/462 (45%), Gaps = 40/462 (8%) Query: 21 GPEYTKPHMPL--LPTQF-------SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GP+Y HMP +P + + ++ ++D+ WW F+D +L ++++ AL+Q Sbjct: 39 GPDY---HMPASDMPAAYPHAAALDAREATQPAPSLDS--WWLGFDDPTLTRVIQRALEQ 93 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS---------------HRFIPNLKTNS 116 NL + A R++ A+ A+L P + S S + P + N Sbjct: 94 NLDLAAAIARVDQARAAASHAGAELLPQASLSGSVARQRQSLEGPLGSLGKNAPGFERNK 153 Query: 117 T---GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKE 172 T + + W+ID+ G R + + A + ++ V ++ +Y R ++ Sbjct: 154 TVYSAGVGASWEIDVAGGLRRGAEAASAEAQAAEAEHMGVRVLVAAEAADAYFRVRGAQQ 213 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI+IA Q + K +EL L+ G ++ + EA++ IP L+ ++ Sbjct: 214 RIAIAQQQVRTNAKLLELVQLRLADGIGAERERAQAEAQLAQTRVTIPPLQIELETQLNR 273 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L+G +P T + P + + PA+L++ RPD+ E++LA S A+ Sbjct: 274 LDVLMGAHPGTYAAELLTPTERTAVPQIAVAQG---PANLLQRRPDVIAAERRLAASSAR 330 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A ++ YP LSL+ G +L+ F G + L +FD G++ + + +A+ Sbjct: 331 IGVATAEYYPKLSLSALLGFESLSAGKLFTGSAFQPAAIAGLRWRLFDFGRVDAEVAQAK 390 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + E T+++ +L A ++VENA+ ++ + + +L V H +S + Y+ G Sbjct: 391 GANAEALATYRKAMLRATEDVENAIITLTQLELQGKELTVEVAAHARSRGAAEDAYKGGA 450 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SL ++L+ +R + A++ V + A+G G+ Sbjct: 451 VSLFEVLEEDRLLLAARDQQARVGADNARAAVATFRALGGGW 492 >gi|332186561|ref|ZP_08388305.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332013544|gb|EGI55605.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 476 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 207/463 (44%), Gaps = 38/463 (8%) Query: 18 CTVGPEYTKPHMPLLPT---QFSIGNS-----KNLINIDTLKWWESFNDTSLNKLVKIAL 69 C++ P Y P MP P FS S L WW F D +LN+L Sbjct: 20 CSMAPAYHPPAMPTPPAFKEAFSASASIWKPAGALTTAPRGDWWTGFGDPTLNQLEARID 79 Query: 70 QQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKTNS 116 + T+ A R + A+ + R+ LFP S + P+ T + Sbjct: 80 ADSPTLAAALARYDLARATLAGARSGLFPHVELTPGLIRNRQSGERPLRGGNQPDFYTAA 139 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T D ++ DL+G+ R + S A +++ + KL + +L ++ R ++++ Sbjct: 140 TLGGDISYEADLWGRVRNSVASGRALAEASRDDLAAVKLALQGQLATDFVQLRGQDQQLA 199 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + Q + + K L+H +F G + + + + A + + E + + H I++ Sbjct: 200 LLTQTIMAFAKADALTHNRFRGGIATGMDVGRAGALLGEARAQYAETEAARAITEHAIAS 259 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G PA+ F + + +P I IG+P+ L+ RPD+ E+++A + A+IG+ Sbjct: 260 LVGQPASTF------SIPHRDGVMTLPAIPIGLPSTLLARRPDVAAAERRMAAANARIGV 313 Query: 295 AKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 AK+ +P ++L G S AL + P N W+ GP L +FD GK ++ + A + Sbjct: 314 AKAAFFPQITLGGAGGFQSTALAGLVAAP--NLFWAIGPGAILNLFDGGKRRAEVAAARA 371 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ L A ++VE+AL +++ + AV ++ +++ Y +G Sbjct: 372 DWNGAMADYRTHALGAFQDVEDALATLHHLGEAQAAQDQAVASATRTEQIALDRYIKGAA 431 Query: 410 SLLDILDI-ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD+ E A + L++ R+L + V L A+G G++ Sbjct: 432 TYLDVATAQESALHDRQAALALENRRL-MAGVALIRALGGGWS 473 >gi|307730119|ref|YP_003907343.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307584654|gb|ADN58052.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 500 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 208/465 (44%), Gaps = 40/465 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFNDTSLNKLVKI 67 L C+ P Y +P +PTQ++ G + ++ WW F+D L++L Sbjct: 21 LTACSTLPAYHQPEA-AVPTQYA-GAAAPGWSVAAPADAEPPGPWWTLFHDAELDQLEAR 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPN 111 N T+ +A ++ AA+ + RA P+ A S++ + +P+ Sbjct: 79 VDVSNQTVAKAVAQLQAARAMLDYQRAGYAPTVTAGAAQSRARLSQNVLGHSLAGKTVPD 138 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +T + W+ DLFG+ ++ + N ++ A + +L+V S L Y D R Sbjct: 139 YSVGAT----ASWEPDLFGRVKNATVYARDNAQASEADLQAVRLSVASDLATDYFDLRSL 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + Y + + + GA ++ + + +++S S ++ Sbjct: 195 DRQKKLLDDSVTAYAAALSIVQQQLKDGAIDASAVAQAQTQLESTRSQDTDIDVQRAQLQ 254 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 H I+TL+G PA+ F + +S + +P I G+P+ L+ RPDI E+++A + Sbjct: 255 HAIATLIGVPASSFTLASEVKS------VALPQIPTGVPSQLLERRPDIAAAERRVAAAN 308 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG A++ YP L+L+ + L P + WS G +L +FD G+ + ++ Sbjct: 309 AQIGEARAAYYPDLTLSATAGLESTFFAPWLTAPSLFWSLGAQLAGTLFDGGRRHAALQG 368 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + +++TVL+A ++VE+ L+++ Q A + S+ L+ Y+ Sbjct: 369 ANAQYDSAVADYRQTVLSAFQQVEDNLSTLTTLASEADSQQRATSAAELSLKLTTNRYQA 428 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S LD++ + E + + + + V L A+G G++ Sbjct: 429 GAVSYLDVVTAQTIALTNERTQELIEARRVDASVQLLKALGGGWS 473 >gi|218891633|ref|YP_002440500.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|218771859|emb|CAW27638.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 474 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 12 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 71 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 130 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 131 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 191 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 251 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLGRRPDIANAEAQLAAAQADVQV 306 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 307 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 366 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 367 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 426 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 427 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 464 >gi|160901287|ref|YP_001566869.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160366871|gb|ABX38484.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 493 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 212/474 (44%), Gaps = 33/474 (6%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSL 61 RA+ +L L LAGC++ P + +P P+ PTQ+ ++ +++ TL W D L Sbjct: 8 RALCALAASLVLAGCSLAPVHQRPQAPI-PTQWPQQDAAPVLSSSAATLDWNSFIADRQL 66 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG 118 +LV +A N + Q + AA+ RAD P R ++ Sbjct: 67 RQLVDLAQAHNRDLRQTLLNVEAARALYQVQRADRLPGVGLQGGGTRQRLPGDMNATGQP 126 Query: 119 QLDSDWK---------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 Q+ W+ +DLFG+ R++ E++L + A++++ ++++ +Y+ Sbjct: 127 QVQGSWQAGLGVAAFELDLFGRVRNLSEAALGEYLATEEAARAARISLGAEVVQAYLSRD 186 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 R+ +A + L + ++ L+ + G + L +D+ E+ R Sbjct: 187 GALRRLQLAQRTLQSRESSLRLTAQRRQAGTATALDHQDALGLAAQARADVERSERELRQ 246 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNN-FQPN----LYIPINIGIPADLIRNRPDIRYQEK 283 + + L G + Y+ +S+ QP+ L ++ G P++L+ +RPDI+ E Sbjct: 247 AGNALLLLTGV--EDLGPYLSAESSQPSQPSDVPLLLQDLSAGTPSELLIHRPDIQAAEH 304 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 +L A IG A++ +P +SL G + + + F WSF P++ LP+FD G+ Sbjct: 305 RLRARSADIGAARAAFFPRISLTGFLGSSSADLSDLFRSGQRAWSFTPQVTLPLFDGGRN 364 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++N+ A +++ + A +EV +AL + + ++ + ++S+ L+ Sbjct: 365 RANLDLAVLRKDMAVAAYEQAIQTAFREVADALAATDTLRREEGARLALRDSSRESLRLA 424 Query: 401 MINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G L LD +R A +D ++ +RQLA L+ +G + Sbjct: 425 QARYQAGVDDHLRYLDAQRNAFANESAYID-TVTQRQLA--LAQLFRVLGGSWT 475 >gi|327481829|gb|AEA85139.1| outer membrane protein OprJ precursor [Pseudomonas stutzeri DSM 4166] Length = 465 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 109/455 (23%), Positives = 204/455 (44%), Gaps = 32/455 (7%) Query: 14 LLAGCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++AGC + P L +P+Q+ N N +WW F D +L LV AL + Sbjct: 15 VMAGCVPPRQPLPPEARLNEVPSQW---RQPNHGNAPVAQWWRGFGDPALLDLVDRALAR 71 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTNSTGQ---LDSDW 124 N +L ER+ AA+E I RA L PS A S P T +T L + Sbjct: 72 NTDVLIGAERLAAAREQIRLSRAALLPSLDAVFGLERSQDLGPLGLTRTTAAQPGLQFAY 131 Query: 125 KIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DL+G+ + E++ ++ A+ +L + + + Y+ ++ + H+ + Sbjct: 132 EVDLWGRLASLREAAELQFQASEAEQQTLRLALAATVAQGYVALLSLDRQLLLTHETVRS 191 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + ++ + G TS+L + +E ++ +P LE++ H + L G P Sbjct: 192 RRAALAVAEDRSRMGYTSELEQTQARSEYEAAAQLVPQLEQAILEQEHALRRLTGDPPGP 251 Query: 244 FLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 L P G +P+ L+R RPD+ E +LA S + + P Sbjct: 252 V-------PRGTLAALQAPAVPGSLPSALLRQRPDLYQAELQLAASDRFLDSERDRFLPR 304 Query: 303 LSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 + L+ S+ + ++ Y+ WS G + P+FD ++++ + A + + ++ Sbjct: 305 VQLSASLGRLYVDAL-DYDPVKVWSLGASVLAPLFDGERLEAGVAVATAERNQAAYAYRR 363 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 LNA EVENAL+ ++ + +L+ E+ +S++++ Y G S L+ LD +R Sbjct: 364 AALNAFSEVENALSGLDSLARQSRRLEARREVLARSLAIAEDRYHGGYSSYLEALDAQRN 423 Query: 421 TAKVEVDLSIAKRQLAKS----YVDLYIAIGSGYN 451 D +A+ QL ++ ++LY A+G G+ Sbjct: 424 L----FDTQLAEVQLQEAQLNRLIELYRALGGGWR 454 >gi|237807804|ref|YP_002892244.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] gi|237500065|gb|ACQ92658.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] Length = 483 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 114/468 (24%), Positives = 214/468 (45%), Gaps = 32/468 (6%) Query: 8 FSLF---IVLLAGCTVGPE-----YTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 FSL +++L+ C P+ + F +GN ++ KWW +ND Sbjct: 18 FSLLPISVLVLSACAQAPDQNLAAPKQAAAYASANSFDVGNK---VSWPENKWWLRYNDA 74 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLF-------PSSYASISHRFIP-- 110 LN LV A+ + ++ A R+ +A+ A + +S + +S+++ Sbjct: 75 QLNALVDEAIHDSPSLKAAAARLKSAEGLAQQAGASRYIQAGMALSASESKVSYQYQAYA 134 Query: 111 ---NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N + L+ + D +G+ + + ++ ++ +A A+ A L + + L+ SY + Sbjct: 135 PPKNWNDYGSATLNFSYDFDFWGKNKAAVAAATSDFAAAQAESATANLMISTSLVQSYAE 194 Query: 167 -ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 AR + R A LD+ KK + L +F+ G ++ ++ + EA + E+++ ++++S Sbjct: 195 LARLYANR-DTAVTALDIRKKTVSLLQQRFSNGLETQGAVRQAEALRANAEAELLSIDES 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ LLG L + + Q + +P G+ L+ +RPD+ + Sbjct: 254 IALQKNALAALLGKGPDRGLS-IARPGVKLQQSFGLPKEAGV--GLLGHRPDVTASRWRA 310 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + +IGIAK+ YP +SL+ G A DN N S GP LYLP+F G+++ Sbjct: 311 ESAAKRIGIAKAQFYPDVSLSAFIGYQAFGLDNLTRSGNDAGSIGPALYLPLFTGGRLQG 370 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + AE+S +E + TV A +V + +TS + K Q AV+ + + ++ Sbjct: 371 QLTTAEASYEEAVANYNNTVTQAFHDVADVVTSSKALTARLQKTQEAVDAAQDAYQIANN 430 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G + LD+L E A + L + + V L A+G GY Sbjct: 431 RYRGGLATYLDVLTAEDALLGSQRALVNLQSRSFSLDVALVHALGGGY 478 >gi|126640606|ref|YP_001083590.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978] gi|126386490|gb|ABO10988.1| putative RND family drug transporter [Acinetobacter baumannii ATCC 17978] Length = 468 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 123/457 (26%), Positives = 206/457 (45%), Gaps = 29/457 (6%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ +WW F DT LN+L Sbjct: 13 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDRWWTLFGDTQLNQL 71 Query: 65 VKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 V L++N +T+ QA R+ A ++ + + L SS S H F N +S Sbjct: 72 VTNVLERNSDLAVAGITLQQA--RLQA---DLTANKQGLRTSSSVSTGHSFDLNSGDDSA 126 Query: 118 GQLDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L +++DLFG+ R E+S + + ++I+ Y + E Sbjct: 127 KGLSMSAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNE 186 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R + A Q L +K +L ++ GA S L L + E ++S ++ + +E+ Sbjct: 187 RYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTA 246 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ LL P L + Q P +P I G+PAD++ RPD++ E +L ++A Sbjct: 247 IAVLLHEP----LQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALAT 302 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 K+ YPS+SL S+ + + N + G L LP +K +I + Sbjct: 303 KDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G + Sbjct: 363 YEKAIIQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVA 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L +LD ++ T + L K+ +YV L A+G Sbjct: 423 LKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALG 459 >gi|126442636|ref|YP_001063758.1| outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|126222127|gb|ABN85632.1| outer membrane lipoprotein [Burkholderia pseudomallei 668] Length = 494 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLVPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALIAGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMR 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + L+ + Y G L +L ++ + + A Q + V LY A Sbjct: 430 AARDARWLATVQYEAGTAGYLQVLLADQQYRQARLAWVQASAQRLQDTVALYAA 483 >gi|224367216|ref|YP_002601379.1| putative outer membrane efflux protein (OprM-family protein) [Desulfobacterium autotrophicum HRM2] gi|223689932|gb|ACN13215.1| putative outer membrane efflux protein (OprM-family protein) [Desulfobacterium autotrophicum HRM2] Length = 483 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 213/455 (46%), Gaps = 38/455 (8%) Query: 15 LAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 ++ C++ + P P+ +P +FS L + +WW SF D+ LN L+ AL N Sbjct: 33 ISSCSIKSQ--APRTPVEIPARFSQSGQSTLPD----QWWLSFGDSVLNSLMDQALANNF 86 Query: 74 TILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS----TGQLDSDWKI 126 + A +R+ A+ S ADL P+ + +R+ + +T T L + +++ Sbjct: 87 DLKTAWDRLRQAEALARSAGADLVPTLDVEAENSRNRYYEDGQTTEGHSYTLDLAASYEV 146 Query: 127 DLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DL+G+ R + A A AQ + A L + +++ ++ ++ I + + + Sbjct: 147 DLWGRIRSSRDAAAFEAQASAQDLQAAALTLSAQVAGTWYQLIEQYGQLEILNAQITNNE 206 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 K +EL L+ G +++ ++S + + + + H ++ LLG P + Sbjct: 207 KVLELVTLQVRTGQVGIADMLQQRQLVESNQGEKAQVLAETGVLEHQLAILLGQPPQQ-- 264 Query: 246 HYMQKQSNNFQPNLYIPINI------GIPADLIRNRPDIR--YQEKKLADSVAKIGIAKS 297 N P + I++ G+PA LI RPDIR Y + ADS +G A + Sbjct: 265 --------NVAPRVTALIDLPPMPQSGLPAQLIERRPDIRSAYYSVQAADS--DLGAAIA 314 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + +P L+L+ + T ++ +N +W + L PI D G K+ + R ++A + Sbjct: 315 NRFPQLTLSADLNTTGVHTRDLFN-NWLATLAANLVTPIVDGGLRKAEVDRTRAAASQAL 373 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+ +T+L+A+KEVE+AL ++ +T + + L + + Y QG +L Sbjct: 374 HTYGQTILDALKEVEDALVQEQRRREFITSIDKQLTLAGQVIQRVRDRYLQGTMDYQRVL 433 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D + + ++ L AK+ L + +DL +A+GSG+ Sbjct: 434 DAQLSQQTLQRSLLTAKQALVQDRIDLCLALGSGW 468 >gi|160899681|ref|YP_001565263.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160365265|gb|ABX36878.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 484 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 105/453 (23%), Positives = 209/453 (46%), Gaps = 23/453 (5%) Query: 17 GCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC+V P T P P +P Q+S + + WW++F D L + V++A +N Sbjct: 18 GCSVPPLSTAPEAARPAMPAQWSGAGQEPAAAVQA-SWWQAFGDPLLTRWVELAQSRNND 76 Query: 75 ILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKI 126 +L A R++ A+ N+ A P S+ S+ R + + ++ G L + W+ Sbjct: 77 VLLALSRVDEARANLDVAGAAGLPQLSATAGASTGRSLGARGLAHTRSVQPG-LQASWEP 135 Query: 127 DLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DL+G+ H+E + A L ++ A D L V + +Y+ R + ++ +A + Sbjct: 136 DLWGRIAHLEKAAALRLQASEADRDAVALAVAATTAQAYVGLRSLQSQLQVAQATARSRE 195 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + + L+ + G TS+L L + +AE++S++ + LE S + L G E Sbjct: 196 QALRLADEQARVGYTSQLQLTQAQAELQSVQQAVEQLELSLARQRTALLLLAGGEGDEQA 255 Query: 246 HYMQKQSNN---FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + +++ G+P+ L++ RPDI + +LA + + + ++ P Sbjct: 256 AALMATTDSQSAALGAPPPAPAAGLPSALLQRRPDIARAQLQLAAADESLAVQRTAFLPQ 315 Query: 303 LSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 +SL S N+ + T W+ G + P+F G+++ A + + ++ Sbjct: 316 VSLTASAGSLLVNALQYHPATVWALGGSVLAPLFTGGRLQGQFDAAAAQRDQAAYAYRGV 375 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELH---KKSMSLSMINYRQGRYSLLDILDIE 418 V+ A+ +VENAL +++ ++ QHA E ++S+ + Y G S L+ LD + Sbjct: 376 VIKALADVENALVGT---QRLQSQWQHASEREAVLQRSLGFAKDRYEAGYASYLEELDAQ 432 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + + ++ ++ ++ + LY A+G G+ Sbjct: 433 RNLFQAQQEVIRLRQSQLENAIALYQALGGGWQ 465 >gi|58039158|ref|YP_191122.1| outer membrane efflux lipoprotein [Gluconobacter oxydans 621H] gi|58001572|gb|AAW60466.1| Probable outer membrane efflux lipoprotein [Gluconobacter oxydans 621H] Length = 488 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 109/466 (23%), Positives = 205/466 (43%), Gaps = 36/466 (7%) Query: 15 LAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 ++GC + P Y +P+ + P N + + L W + + D L LV++AL+ Sbjct: 17 VSGCNMAPTYHQPNQAIQNSYPADTGAKNVASAAKVADLGWEDFYTDPRLKALVELALRN 76 Query: 72 NLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKTN-ST 117 N + + ++ A LFP S A S F P + TN ST Sbjct: 77 NRDLAAQAAAVTVSRGQYEIQNASLFPIISAGGQGMFLGPSKTAGFS--FAPGVGTNIST 134 Query: 118 GQLD------SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARH 169 +L S +++DL+G+ R++ A L+S ++ L +S++ +YI Sbjct: 135 LRLYETSIGFSSYEVDLWGRIRNLTRQQAETVLNSVENTRNVL-LTTVSQIGTTYIQWLA 193 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E + + L + L+ L + G L+L +++ +++ + ++ + Sbjct: 194 DREELRVTRDTLKSENDTLRLTQLAYDNGEADALTLAQVKTQVEQASAYEAQYVRAVADD 253 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H + L+G T + + + + G+P+DL+ RPDIR E L + Sbjct: 254 EHALQLLVG---TPLPANLPPPAPFGAQTMISDLPEGLPSDLLAQRPDIRAAEHTLIGAN 310 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSF-PGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +G A++ +P ++L G+ +L F PG T W+ P + +PIF G+ + N+ Sbjct: 311 ANVGAARAAFFPRVTLTASEGTSSLQFRKLFTPGAET-WTVSPSISVPIFTWGQSEGNLM 369 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ + +++ V A +EV +ALT+ + VE +K+ L+M+ YR Sbjct: 370 MAKGQKLQYAAQYEKAVQTAFREVSDALTARETYTAQDRHMAQLVEQSQKAFDLAMMRYR 429 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L L +R + + + K ++ V LY A+G G++ Sbjct: 430 AGIDSYLTTLTQQRTLFQAQQNAITVKAARFQNIVTLYRALGGGWS 475 >gi|170720210|ref|YP_001747898.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169758213|gb|ACA71529.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 484 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 107/482 (22%), Positives = 220/482 (45%), Gaps = 50/482 (10%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S ++ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTESADVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLK 113 F+D +L +L++ +L N + A ++A + RADLFP S+ S S + +P Sbjct: 60 FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVP-AD 118 Query: 114 TNSTGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 ++TG+ + S +++DLFG+ R + E +L S+ ++ +++ + Sbjct: 119 MSTTGEANITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVA 178 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + + + L Y+++ L+ G S L L + ++ Sbjct: 179 NAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDLSQARTAVEGARVKYSQ 238 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----------GIPADL 271 ++ ++++++ L+G NL P+ + G+P+D+ Sbjct: 239 YQRLVAQDLNSLAVLVG--------------TGIPANLPKPLELDADQLAEVPAGLPSDI 284 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 ++ RPDI+ E L + A IG A++ +PS+SL G+++ D F G + W F P Sbjct: 285 LQRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGTLSPDMDGLFKGGSGTWLFQP 344 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 ++ LPIF+ G +K+++ ++ +++T+ A +EV + L + ++ + + Sbjct: 345 QINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRD 404 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V+ ++ L+ YR G S L LD +R + L + S V+LY A+G Sbjct: 405 LVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQSLITDRLSQLTSEVNLYKALGG 464 Query: 449 GY 450 G+ Sbjct: 465 GW 466 >gi|311109046|ref|YP_003981899.1| multidrug efflux system lipoprotein 3 [Achromobacter xylosoxidans A8] gi|310763735|gb|ADP19184.1| multidrug efflux system lipoprotein 3 [Achromobacter xylosoxidans A8] Length = 492 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 126/479 (26%), Positives = 214/479 (44%), Gaps = 58/479 (12%) Query: 17 GCTVGPEYTKPHMPLLPTQF--------SIGNSKNL-INIDTLK--WWESFNDTSLNKLV 65 GC VGP Y +P +P F G K + D L+ WW+ F D LN+L Sbjct: 20 GCAVGPTYERPSA-AVPAAFKEAALPASEAGTWKTAEPSEDALRGAWWKVFGDEGLNQLQ 78 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-------- 117 + A Q N + A R+ ++ RA FP+ + F PN + S Sbjct: 79 EEAQQANQNLQAAAARLTQSRALQREARAGFFPN----LDAAFGPNRQRPSAVSQGLPDG 134 Query: 118 ----------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 Q ++ DLFG+ +++ A+ + A L + + + +Y Sbjct: 135 TSTSPVTTWRAQGAVSYEADLFGRVASTYDAASADAQQSEALYRSVLLALQADVATTYFL 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + Q + L ++L ++ G S+L L + +AE+ S +S+ +++ Sbjct: 195 VREQDAESQLYRQTVKLRTDTLQLIQRRYDAGDISELDLARAKAELASAQSEALGIDRRR 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + H ++ LLG +F Q + + I G+P+ L+ RPDI E+ +A Sbjct: 255 AASEHALAVLLGRAPADFAMPPQPIQK-----VALSIPAGLPSTLLERRPDIAAAERAMA 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLYLPIFDK 337 + A++G AKS +P L + G A +++S G WS G L +PIFD Sbjct: 310 AANARVGAAKSAFFPRLDITG--AFGYESSDLGNLFQWSSRTFLLGPLVGAALSMPIFDG 367 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++ + RA + +E +++TVLNA +EVE+ L ++ AV+ ++ Sbjct: 368 GRRQAGLDRARAVYEEDVAVYRQTVLNAFREVEDNLANLRILADQTKAQDAAVDAAARAA 427 Query: 398 SLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY-NP 452 LS YR+G S LD+++ +R+ +V V L+ + A+S V L AIG G+ NP Sbjct: 428 KLSHTQYREGSISFLDVIEADRSVLLQQRVSVQLN---GEQARSAVGLIRAIGGGWENP 483 >gi|254240824|ref|ZP_04934146.1| hypothetical protein PA2G_01496 [Pseudomonas aeruginosa 2192] gi|126194202|gb|EAZ58265.1| hypothetical protein PA2G_01496 [Pseudomonas aeruginosa 2192] Length = 474 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 12 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 71 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRGSGYSGTDATSDNDAVDS 130 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 131 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 191 RIARLNLDNAEHVLRLVGTRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 251 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 306 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 307 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 366 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 367 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 426 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 427 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 464 >gi|291514058|emb|CBK63268.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Alistipes shahii WAL 8301] Length = 456 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 104/450 (23%), Positives = 202/450 (44%), Gaps = 28/450 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 L GC + YT+P + + + + + ++W E F D L L+ +AL+ N Sbjct: 13 LTGCGIYKPYTRPEVTTAGL-YGSAETADTTTLGDIRWQEMFTDPQLQALIALALENNTD 71 Query: 75 ILQATERINAAKENILSVRADLFPS----SYASISH-RFIPNLKTNSTGQLDSDWKIDLF 129 +L A R+ A+ + S R PS S+S P KT S + + W+ID+F Sbjct: 72 LLSAGWRVKEAEATLKSARLAYLPSFNFAPQGSLSSFDGGPTAKTYSI-PVTASWQIDIF 130 Query: 130 GQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 + + L YAQ K +IS + Y + + + ++ Sbjct: 131 NGLTNAKRKAKAL---YAQSKEYEQAVKTQLISGVANLYYTLLMLDSQYEVTEETAAKWR 187 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +++E G ++ + + EA +IE+ + L +++ +LLG E Sbjct: 188 QSVEAMRALKEAGYANEAGVAQYEANTLAIEASLHDLGYQRTQAENSLCSLLG----EVP 243 Query: 246 HYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 H + + N +P + +G+P ++ NRPD+R E L S A+S LYPS+ Sbjct: 244 HTIAR---GRLENQQLPDDLTVGVPLLMLSNRPDVRSAEYSLMQSYYATASARSALYPSI 300 Query: 304 SLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L+G++ T+++ PG W+ L PIF+ ++ ++ A++ +E +++Q Sbjct: 301 TLSGTVGWTNNSGAGIVNPG-KLIWNAAGSLLQPIFNANANRARVKIAKAQQEESKLSFQ 359 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +T+LNA EV NALT + + +E ++++ + + + G + L++L ++ Sbjct: 360 QTLLNAGAEVNNALTQCQSARAKADLRERQIEALERAVESTELLMQHGSTTYLEVLTAQQ 419 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++ + + V+LY A+G G Sbjct: 420 SLLSAQLSQIADRFDEIQGTVNLYQALGGG 449 >gi|78048207|ref|YP_364382.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036637|emb|CAJ24328.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 496 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 209/472 (44%), Gaps = 48/472 (10%) Query: 22 PEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNLTIL 76 P YTKP + + +++ L WWE +D L +LV AL + + Sbjct: 24 PNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELHDPLLTQLVTQALADSPNLR 83 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIP-------------------------- 110 A R+ A + RA+ P AS + + Sbjct: 84 AAQARLRANRALAQQRRAERLPKLNASALYAYAEPPQTIVDTLGGLQQGQPGQPPAAGNQ 143 Query: 111 --NLKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL+ + D+ W++D FG+RR E +LA ++ A++ A++ + +++ Y+ Sbjct: 144 ALNLEETQIYSAGFDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAAEVGQVYL 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + R++IA LD +++++L + QGA S L + ++ +++ E+ LE Sbjct: 204 NYRGLQARLAIADTNLDKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQEAQRLPLEMQ 263 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPDIRYQE 282 + ++ ++G P + Q QP +P + + LIR RPD+R E Sbjct: 264 AQEAQDQLALMVGREPGA-----LDAQLGTPQPLPMLPTQVRVDDAGALIRRRPDVRKAE 318 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGK 339 ++LA S A+IG A + +P +SL G ++ S +N+ P L IFD GK Sbjct: 319 RELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALTTLAVPMLRWSIFDFGK 377 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + +A + + ++ +VL A+++ +AL +K + + A +S L Sbjct: 378 TRAQVEQARAGNAGRTAAYEGSVLAALQDANSALARFGSARKQLMVARQAEASATRSAGL 437 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 438 MQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|253568911|ref|ZP_04846321.1| outer membrane protein oprM [Bacteroides sp. 1_1_6] gi|298387108|ref|ZP_06996662.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] gi|251840930|gb|EES69011.1| outer membrane protein oprM [Bacteroides sp. 1_1_6] gi|298260258|gb|EFI03128.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] Length = 465 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 200/455 (43%), Gaps = 27/455 (5%) Query: 13 VLLAGCTVGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P + P + + + N L W E F D L L++ Sbjct: 17 ALLSSCHIYKSYDRPEDITASGLYRDPAADNDTLASDTTNFGNLPWREVFTDPQLQSLIE 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-QLDS 122 L+QN +L A + AA+ +++S R PS S F N T + + + Sbjct: 77 QGLKQNTDLLSAALNVKAAEASLMSARLAYAPSIGLSPQGTISSFDKNAATKTYSLPVTA 136 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DLFGQ +R+ + +L AY Q + VI+ + Y ++ I Sbjct: 137 SWQVDLFGQLLNSKRNAQVTLKQTK-AYRQA--VQTQVIANIANMYYTLLMLDRQLEITQ 193 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ K+N E + + +L + +A + + IP +E+S R + +ST LG Sbjct: 194 ATAEVLKRNAETVQALSERSTYTSAALAQSKAAYAQVVASIPDIEQSIRETENALSTFLG 253 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 E H +++ Q L ++ GIP L+ NRPD++ E LA A++ Sbjct: 254 ----EAPHAIKRGVLEAQA-LPEELSAGIPLQLLSNRPDVKAAEMSLASCYYNTNSARAA 308 Query: 299 LYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP ++L+GS T+ PG + G L P+F +G + ++ A++ ++ Sbjct: 309 FYPQITLSGSAGWTNSAGSAIINPGKLLASAIG-SLTQPLFYRGTNIARLKAAKAQEEQA 367 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++Q+T+ NA EV NAL+ K Q VE KK+ + + G + L++ Sbjct: 368 KLSFQQTLYNAGSEVSNALSLYQNTSKKAESRQMQVESAKKASEDTKELFNLGTSTYLEV 427 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +++ ++ ++ V LY A+G G Sbjct: 428 LSAQQSYLSAQISQVSDCFDKMQAVVSLYQALGGG 462 >gi|255531094|ref|YP_003091466.1| NodT family RND efflux system outer membrane lipoprotein [Pedobacter heparinus DSM 2366] gi|255344078|gb|ACU03404.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter heparinus DSM 2366] Length = 468 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 119/474 (25%), Positives = 224/474 (47%), Gaps = 48/474 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 I I+ L C V +Y +P + L + G+S I +L W F D +L L Sbjct: 11 IIGFSILTLTAC-VSRKYERPAVNSNDLYRDNTTGDS---TTIASLPWKNLFADAALQAL 66 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------HRFIPNLKT 114 ++ + +NL + QA ERI A+ +L + L PS A +S F P + Sbjct: 67 IQQGINENLDLKQAIERIKIAEATLLQSKGALLPSLTADLSVTDAKQSRAALNFPPGINI 126 Query: 115 NS-----TGQLDSDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLIP---- 162 N+ QL + W+ D++G+ + SAYA Q D AK V ++LI Sbjct: 127 NTETQTYKAQLSTSWEADIWGKLSSAKR------SAYASLLQSDAAKRAVQTQLIANIAN 180 Query: 163 SYIDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGA-TSKLSLVKLEAEIKSIESDIP 220 Y + ++++I Q + + + ++E + LK +GA + ++V+ EA + + + +P Sbjct: 181 GYYNLLALDKQLAITEQTIRIRQTDVETMKSLK--EGAVVNGAAVVQSEANLYAAQVTLP 238 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L+++ R + +S LLG + ++ Q +Y + G+ A L++NRPD++ Sbjct: 239 DLKRNIRETENALSILLGKGPGKI-----ERGTIDQQTVYSNLQTGVSAQLLQNRPDVQA 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E + +A+S YP+L+L NG ++ +F + ++ + PIF+KG Sbjct: 294 AEFAFRAAFENKNVARSYFYPALTLTANGGLSSLSFKNFFDNSVFYNLIGGITQPIFNKG 353 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKS 396 + K+ ++ AE+ Q + ++Q+T+L + +EV NAL + +K+ +Q A Sbjct: 354 QNKARLKTAEAQKQIAFYSFQQTLLTSGQEVSNALYAYQTAAEKETTRAMQVASLTKAVD 413 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ Y + D+L E++ ++ + Q +S V+LY A+G G+ Sbjct: 414 YTKELLRYSSAT-NYTDVLTSEQSLLAAQLSGINDRLQKLQSVVNLYRALGGGW 466 >gi|107023020|ref|YP_621347.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686738|ref|YP_839985.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105893209|gb|ABF76374.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652453|gb|ABK13092.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 478 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 207/459 (45%), Gaps = 38/459 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQNLTIL 76 C++ P+ P +P+ +F + + +L W + F D+ L +LV AL NL I Sbjct: 16 CSIAPQPLAP-VPVETDRFRHADPATDAHAPSLAAWPAWFGDSQLGRLVDAALAHNLDIR 74 Query: 77 QATERINAAKENILSVR-ADLFPSSYASISHRFIPNL-KTNSTGQLD------------- 121 A R++ A+ +L VR A L P+ R P+ +T +G +D Sbjct: 75 AAAARVDQAQA-LLGVREAALAPTV------RVDPSFSRTRVSGTVDNALPKRTMHNWSV 127 Query: 122 ---SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +++DL+G+ R + NL A A D +L V +++ Y+ R+ + + Sbjct: 128 PVAASYEVDLWGRLRGDADVGEQNLLQAAADRDAVRLRVATEVAVDYLTLRYVDDDLVTL 187 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN-VHNISTL 236 + + L + +++ + GA S L ++ A++ + +D+ + R N V ++ L Sbjct: 188 VRAIGLRRTALDVIAARVRAGAASDLDGLRASADLDTAHADLAE-SRRLRENLVDALAVL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G T F P + G+P+ L+ RPD+ ++ + ++GIA+ Sbjct: 247 TGVSPTAF-----DVDTGAVPVQVPEVPAGLPSALLAQRPDVFAAARRADAASLELGIAR 301 Query: 297 SDLYPSLSL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + P+L+L +G A SF N+ WS G + L +FD GK + + A + Sbjct: 302 TAWLPTLTLTADGGFATRDLRSFLDRNSSLWSLGANVALTLFDGGKRDAAVAAARAGTNV 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ T + A+++V++AL I K+ + + A + LS+ Y G S L+ Sbjct: 362 ADADYRATAIGALRDVQDALNDIAAQKERIVRYDSAARATDAAARLSLSRYAHGYVSYLE 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++D +R L +++ LA + V L A+G G+ P Sbjct: 422 VIDADRDALNARRQLIHSRQALAVATVSLVRALGGGWTP 460 >gi|94313787|ref|YP_586996.1| RND cation/multidrug efflux system outer membrane protein, NodT [Cupriavidus metallidurans CH34] gi|93357639|gb|ABF11727.1| RND cation/multidrug efflux system outer membrane protein, NodT [Cupriavidus metallidurans CH34] Length = 493 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 204/474 (43%), Gaps = 41/474 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT------------QFSIGNSKNLINIDTLKWWESFNDTS 60 ++LAGC++ P Y P P T Q+ +WW+ F D Sbjct: 19 LVLAGCSLAPTYKVPETPTASTFKEAEAAAAEGAQWKTATPAE--GQHRGEWWKVFGDAD 76 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNS--- 116 L++L+ A N + A R+ A+ + ADL+P A S R P+ + Sbjct: 77 LDRLIDAANAYNQDLAAAAARLKQARAFTGATEADLYPQLSAGFSPTRAQPSAASQGLPD 136 Query: 117 ----------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +L +++++DLFG+ + ++ A+ A +L + + +Y Sbjct: 137 GTRVSPQTVYQARLIANYELDLFGRVANSVNAARADEQGAEDLYRSVQLALQADTAQAYF 196 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + + + L + + L ++ G T+ L + EAE+ + +D+ +E+ Sbjct: 197 ALRTLDSDRDLLNATIKLREDALTLLRKRYEAGETTDLDPARAEAELGTARADLAGIERR 256 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ L G ++F + P + +P G+P++L+ RPDI E+++ Sbjct: 257 RANQEHALAVLTGVSPSQFALAARPFDT---PPVAVPA--GLPSELLERRPDIAAAERQM 311 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGP----KLYLPIFDKG 338 A + A+IG+AK+ +P +SL N F + W GP + +FD G Sbjct: 312 AAANARIGVAKAAFFPRISLTALFGFESSDISNLFKWSSRAWLLGPLVGSTVAQTVFDGG 371 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + SN+ A ++ +E +++TVL A +EVE++L + + L A+ K++ Sbjct: 372 RNSSNLAGARAAHEESVARYRQTVLVAFREVEDSLADVRWFSQQGAALDSALAGAKRAQR 431 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y G L ++D +R + + D + A + V L ++G G+ P Sbjct: 432 TSRSRYDAGAVDYLTVIDADRTVLQSQRDANAVAGLRAAATVSLVRSLGGGWGP 485 >gi|326577593|gb|EGE27470.1| RND system membrane channel OprM [Moraxella catarrhalis O35E] Length = 507 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 109/471 (23%), Positives = 212/471 (45%), Gaps = 34/471 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDT-----------LKWWES 55 S + +A C+ P+ P+L + + + + DT L+W E Sbjct: 12 LSALAIGMAACSSIPKKIDTSAPILAVPNVPMKDGYQVYDADTISVAQAPSVASLRWQEF 71 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFI 109 + D L L+++ALQ N + A + +A+ A P ++ S +R Sbjct: 72 YTDPKLAALIELALQNNKDLQSAVLAVQSARAQYQITEAGSVPQVGSNTSVTRQANNRID 131 Query: 110 PNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + TN G S +++DL+G+ + +L + A D ++++IS + Y++ Sbjct: 132 AHASTNYHVGLAMSGYELDLWGKVASQKQQALHQYLATNAAKDAVQISIISSVAQGYVNL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 H + +A Q L + + ++ +F G SK ++ + ++S + + S Sbjct: 192 AHALAQRQLAEQTLKTREHAMMITQKRFEAGIDSKSPSLQAASSLESARLAVYAADTSIL 251 Query: 228 MNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G P E L + + + G+P++L+ RPDI E +L Sbjct: 252 KAKNALQLLIGRPVPNELLPAIDASMHMGHITTQTLFSAGLPSELLYYRPDIMQAEHRLK 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A I +A++ +PS+ L+ ++ + + N F WSFGP + LPIFD G ++N Sbjct: 312 AAGANINVARAAYFPSIRLSSNVGFSSNSLNNLFESSALGWSFGPAISLPIFDAGSRRAN 371 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLS 400 A+ + Q + +++ + NA KEV + L E + +L + L ++++ ++ Sbjct: 372 HEMAQVAQQSALVDYEKAIQNAFKEVSDVLA---ERATLGLRLDAQIRLQDNYRQTYDIA 428 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +R G + L +LD ER+ + + I + +LAK S + LY A+G G Sbjct: 429 YARFRSGLDNYLTVLDAERSLFINQQN--ILQLELAKLVSQIQLYQALGGG 477 >gi|254884403|ref|ZP_05257113.1| outer membrane protein oprM [Bacteroides sp. 4_3_47FAA] gi|294778118|ref|ZP_06743549.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] gi|254837196|gb|EET17505.1| outer membrane protein oprM [Bacteroides sp. 4_3_47FAA] gi|294447977|gb|EFG16546.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] Length = 466 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 109/458 (23%), Positives = 209/458 (45%), Gaps = 33/458 (7%) Query: 14 LLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 LL+GC + Y +P P+ N + N+ L W E F D L L Sbjct: 18 LLSGCHIYKSYDRPESIDATGIYRDPVAANDTLAAN--DTTNMGNLSWKEIFRDPKLQML 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ L N+ + A R+ AK + S R PS S++ N T Sbjct: 76 IEEGLANNVDMQAAILRVKEAKALLTSARLSYLPSLALAPQGSLTSVDKSTPVKNYTLPA 135 Query: 121 DSDWKIDLFGQ--RRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++DLFG+ H + L S AY Q ++L I + +Y ++S+ Sbjct: 136 SASWEVDLFGKLLNAHRGQKASYLQSKAYQQAVRSQL--IGGIANAYYSLLMLDRQVSVT 193 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + L K+ + G T++ ++ + + E+ + L++ R ++IS LL Sbjct: 194 EQNVALMKETVRTMEAMKEAGMTTEAAVAQSKGAYHQTEASLADLKRQVRETENSISVLL 253 Query: 238 G-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P +++Q + + +G+P L+ NRPD++ E LAD+ A+ Sbjct: 254 AKAPQNIDRGTLEEQV------MPADLAVGVPLQLLENRPDVKAAELALADAYYTTNQAR 307 Query: 297 SDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 S YPS+++ G++ T+ + S P W+ L PIF +GK+ +N++ +++ Sbjct: 308 SAFYPSVNITGTLGWTNGSNGTVISNPAV-MLWNAIGSLTQPIFQRGKLIANLKVSKAEE 366 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q + +Q+T+L A KEV +AL + K +++ Q V +K++ ++ ++ G+ + Sbjct: 367 QIAKMNYQQTILEAGKEVSDALFLYDTADKKLSEHQAQVSEMQKAVEMNNDLFQAGKATY 426 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+I+ +++ +++ Q ++ ++LY A+G G Sbjct: 427 LEIITAQQSLLSAQLNEVSDTFQRMQAVINLYSALGGG 464 >gi|15599403|ref|NP_252897.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|107103725|ref|ZP_01367643.1| hypothetical protein PaerPA_01004796 [Pseudomonas aeruginosa PACS2] gi|218889463|ref|YP_002438327.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|254237079|ref|ZP_04930402.1| hypothetical protein PACG_03120 [Pseudomonas aeruginosa C3719] gi|9950420|gb|AAG07595.1|AE004837_6 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|25137487|dbj|BAC24097.1| putative outer membrane efflux protein [Pseudomonas aeruginosa] gi|126169010|gb|EAZ54521.1| hypothetical protein PACG_03120 [Pseudomonas aeruginosa C3719] gi|218769686|emb|CAW25446.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 487 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 209/469 (44%), Gaps = 30/469 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 N+ R +L + LA C+VGP+Y +P P P + + S++L + WW F Sbjct: 7 NLSRLALALAVGTGLAACSVGPDYQRPQSP--PPRVA---SEHLGEFSGERREAPWWSFF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT 114 +D L +LV AL +N I +A + +A+ D P +S A S L Sbjct: 62 DDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQLPQVTSQAGYSRSIEQQLDY 121 Query: 115 NST----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + D+ W+IDLFG+ R +++LA ++A A + + +L++ + + Sbjct: 122 DGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARAEAADADLRLVRLSIAADTARA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + ++ R+ +A + ++ +EL+ G+ + +A + E+ IP L Sbjct: 182 YFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSGLPEDVENAQANLLRSEAAIPPLT 241 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + L G P + + NL +G LI RPD+ E Sbjct: 242 TALESARYRLDVLRGEAPGSGAPILDGGAAAPLAKNL----PLGDVDRLILQRPDVVSAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++LA S +G A ++LYP L L G I + + P + P F G + Sbjct: 298 RQLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDLGSASRAFELAPSVSWPAFRLGNV 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E+ + +Q ++L A ++V NAL + E ++ + L + ++ ++ Sbjct: 358 RARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQLAEHQRRLVALFQSATHGANALEIA 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G S L +L+ +RA ++ +L+ A+ + + LY A+G G Sbjct: 418 NERYRAGAGSYLAVLENQRALYQIREELAQAETASFVNVIALYKALGWG 466 >gi|209516345|ref|ZP_03265202.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209503281|gb|EEA03280.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 494 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 116/469 (24%), Positives = 205/469 (43%), Gaps = 40/469 (8%) Query: 10 LFIVLLAGCTVGPEYTKP----------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 L V LA CTVGP+Y P MP + S + ++L + WW +ND Sbjct: 8 LGFVCLAACTVGPDYHVPKDALALNPGAQMPFVNASDSSLSGESLPD----HWWRLYNDQ 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTN 115 L+ V+ L N + A + + A + ++ P S IS +P Sbjct: 64 RLDSFVQEGLAANRDLGAAEQNLARAVYAVYEAKSARLPQTELSGEVGISTPPLPRASGL 123 Query: 116 STGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G + S +DL G RR I+ + N ++ A D + V + + +YI A Sbjct: 124 PLGGVYSLGGSVSLPLDLAGGIRREIQVAKYNEQASLAIRDEVRTTVAAAITRNYIAACS 183 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ A ++LD+ + + + + G + + + A + + + IP + Sbjct: 184 ANQTLASARRVLDIETQTLHATERLKSGGRATAFDVTRAHAAVDTSAAAIPPIISQRNAA 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 V ++ LLG ++ +Q+ S P+L + +G LIR RPDIR E+KLA + Sbjct: 244 VFALTALLGRLPVDYPRDVQECST--PPHLLAVVPVGDGQQLIRRRPDIREAERKLASAT 301 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRA 347 A IG+ + LYPS+SL GSI ++ S + S GP + + ++ I A Sbjct: 302 ASIGVEVATLYPSVSLGGSIGMSGPISAFSKQSQIAVSVGPLVTWTFPNIATARARIAEA 361 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN---- 403 + A+ + VL+A+++ E +L + V ++QH + +H S + N Sbjct: 362 GAGARAAEKNFDSVVLDALRDTEISLDA------YVQEIQHNLSVHAARDSAADANDQAW 415 Query: 404 --YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R GR L++L + A E L+ + L V +++A+G G+ Sbjct: 416 RLFRYGRTDFLNVLSAQENLASAESALAASNATLIDKQVSVFVALGGGW 464 >gi|254242888|ref|ZP_04936210.1| hypothetical protein PA2G_03659 [Pseudomonas aeruginosa 2192] gi|126196266|gb|EAZ60329.1| hypothetical protein PA2G_03659 [Pseudomonas aeruginosa 2192] Length = 487 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 209/469 (44%), Gaps = 30/469 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 N+ R +L + LA C+VGP+Y +P P P + + S++L + WW F Sbjct: 7 NLSRLALALAVGTGLAACSVGPDYQRPQSP--PPRVA---SEHLGEFSGERREAPWWSFF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT 114 +D L +LV AL +N I +A + +A+ D P +S A S L Sbjct: 62 DDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQLPQVTSQAGYSRSIEQQLDY 121 Query: 115 NST----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + D+ W+IDLFG+ R +++LA ++A A + + +L++ + + Sbjct: 122 DGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARAEAADADLRLVRLSIAADTARA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + ++ R+ +A + ++ +EL+ G+ + +A + E+ IP L Sbjct: 182 YFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSGLPEDVENAQANLLRSEAAIPPLT 241 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + L G P + + NL +G LI RPD+ E Sbjct: 242 TALESARYRLDVLRGEAPGSGAPILDGAAAAPLAKNL----PLGDVDRLILQRPDVVSAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++LA S +G A ++LYP L L G I + + P + P F G + Sbjct: 298 RQLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDLGSASRAFELAPSVSWPAFRLGNV 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E+ + +Q ++L A ++V NAL + E ++ + L + ++ ++ Sbjct: 358 RARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQLAEHQRRLVALFQSATHGANALEIA 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G S L +L+ +RA ++ +L+ A+ + + LY A+G G Sbjct: 418 NERYRAGAGSYLAVLENQRALYQIREELAQAETASFVNVIALYKALGWG 466 >gi|323528720|ref|YP_004230872.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385722|gb|ADX57812.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 500 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 208/465 (44%), Gaps = 40/465 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFNDTSLNKLVKI 67 L C+ P Y +P +P Q++ G + ++ WW F+D L++L Sbjct: 21 LTACSTLPAYHQPEA-AVPAQYA-GAAAPGWSVAAPADAEPPGPWWTLFHDAELDQLEAR 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPN 111 N T+ +A ++ AA+ + RA P+ A S++ + +P+ Sbjct: 79 VDVSNQTVAKAVAQLQAARAMLDYQRAGYAPTVTAGAAQSRARLSQNVLGHSLAGKTVPD 138 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T + W+ DLFG+ ++ + N ++ A + +L+V S L Y D R Sbjct: 139 YSAGVT----ASWEPDLFGRLKNATVYARDNAQASEADLQAVRLSVASDLATDYFDLRSL 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + Y + + + GA ++ + + +++S S ++ Sbjct: 195 DRQKKLLDDSVTAYAAALSIVQQQLKDGAIDASAVAQAQTQLESTRSQDMDIDVQRAQLQ 254 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 H I+TL+G PA+ F + +S + +P I G+P+ L+ RPDI E+++A + Sbjct: 255 HAIATLIGMPASSFALASEVKS------VALPRIPTGVPSQLLERRPDIAAAERRVAAAN 308 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG A++ YP L+L+ + L P + WS G +L +FD G+ ++++ Sbjct: 309 AQIGEARAAYYPDLTLSATAGLESTFFAPWLTAPSLFWSLGAQLAGTLFDGGRRDASLKG 368 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + +++TVL+A ++VE+ L+++ Q A + S+ L+M Y+ Sbjct: 369 ANAQYNSAVADYRQTVLSAFQQVEDNLSTLTTLASEADSQQRATSAAELSLKLTMNRYQA 428 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S LD++ + E + + + + V L A+G G++ Sbjct: 429 GAVSYLDVVTAQTIALTNERTQEMIEARRIDARVQLLKALGGGWS 473 >gi|296112703|ref|YP_003626641.1| RND system membrane channel OprM [Moraxella catarrhalis RH4] gi|295920397|gb|ADG60748.1| RND system membrane channel OprM [Moraxella catarrhalis RH4] gi|326560959|gb|EGE11324.1| RND system membrane channel OprM [Moraxella catarrhalis 7169] gi|326563805|gb|EGE14056.1| RND system membrane channel OprM [Moraxella catarrhalis 46P47B1] gi|326566818|gb|EGE16957.1| RND system membrane channel OprM [Moraxella catarrhalis 103P14B1] gi|326567342|gb|EGE17457.1| RND system membrane channel OprM [Moraxella catarrhalis BC1] gi|326576731|gb|EGE26638.1| RND system membrane channel OprM [Moraxella catarrhalis 101P30B1] Length = 507 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 109/471 (23%), Positives = 212/471 (45%), Gaps = 34/471 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDT-----------LKWWES 55 S + +A C+ P+ P+L + + + + DT L+W E Sbjct: 12 LSALAIGMAACSSIPKKIDTSAPILAVPNVPMKDGYQVYDADTISVAQAPSVASLRWQEF 71 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------HRFI 109 + + L L+++ALQ N + A + +A+ A P ++ S +R Sbjct: 72 YTNPKLAALIELALQNNKDLQSAVLAVQSARAQYQITEAGSVPQVGSNTSVTRQANNRID 131 Query: 110 PNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 N TN G S +++DL+G+ + +L + A D ++++IS + Y++ Sbjct: 132 ANASTNYHVGLAMSGYELDLWGKVASQKQQALHQYLATNAAKDAVQISIISSVAQGYVNL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 H + +A Q L + + ++ +F G SK ++ + ++S + + S Sbjct: 192 AHALAQRQLAEQTLKTREHAMMITQKRFEAGIDSKSPSLQAASSLESARLAVYAADTSIL 251 Query: 228 MNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + L+G P E L + + + G+P++L+ RPDI E +L Sbjct: 252 KAKNALQLLIGRPVPNELLPAIDASMHMGHITTQTLFSAGLPSELLYYRPDIMQAEHRLK 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A I +A++ +PS+ L+ ++ + + N F WSFGP + LPIFD G ++N Sbjct: 312 AAGANINVARAAYFPSIRLSSNVGFSSNSLNNLFESSALGWSFGPAISLPIFDAGSRRAN 371 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLS 400 A+ + Q + +++ + NA KEV + L E + +L + L ++++ ++ Sbjct: 372 HEMAQVAQQSALVDYEKAIQNAFKEVSDVLA---ERATLGLRLDAQIRLQDNYRQTYDIA 428 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +R G + L +LD ER+ + + I + +LAK S + LY A+G G Sbjct: 429 YARFRSGLDNYLTVLDAERSLFINQQN--ILQLELAKLVSQIQLYQALGGG 477 >gi|258542016|ref|YP_003187449.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256633094|dbj|BAH99069.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256636151|dbj|BAI02120.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256639206|dbj|BAI05168.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256642260|dbj|BAI08215.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256645315|dbj|BAI11263.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256648370|dbj|BAI14311.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256651423|dbj|BAI17357.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654414|dbj|BAI20341.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 536 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 101/470 (21%), Positives = 198/470 (42%), Gaps = 49/470 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTLKWWESFNDTSLNKLVKI 67 LAGC + P Y KP +LP +S S + I D WW D LN+L Sbjct: 24 LAGCDMAPRY-KPAQFVLPDNWSGQGVMKPARPSDDTIRSD---WWTMLGDPVLNQLEDQ 79 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFIPNLKTNSTGQ 119 A++ N + E +++ ++ L+P Y HR Sbjct: 80 AMRLNPDLQAQAEAFMQSRDMAAEAKSHLYPQLNGAASGEKYKGSQHRLWRGAGATGPMY 139 Query: 120 LDSD-------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + S+ W+ D + R I + + A A+L++ ++L Y+ R Sbjct: 140 MSSEQYSATATWEPDFWSAIRNRIRMAKQGVQENAANYASARLSLQAELASDYVILRGLD 199 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ + Y+ ++++ ++ + + + EA++ + ++ + + H Sbjct: 200 AQDAVYKDSIRYYQTAVQVTRMRLAGAIAPGMDVSRAEAQLYTTQAQETDIHTQRDVMEH 259 Query: 232 NISTLLGYPATEF-------LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 I+ L+ F L + K+ + +P+ L+ RPDI E++ Sbjct: 260 AIAVLVNQAPASFHIAPVTKLTFADKEPP-----------VALPSTLLERRPDIAAAERR 308 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIK 341 +A + IG++++ YP ++ N DN F YN + FG + LP+F G + Sbjct: 309 MAQANRAIGVSRAAFYPHVTFNAMTGFM-DNGFDLASLYNAMYQFGAQAVLPLFQGGLRR 367 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + ++R S ++ ++ TVL+A +EVE+ LT N K V + +AV+ ++ ++M Sbjct: 368 AELQRTWSGYRQTEDLYRATVLDAFQEVEDNLTRTNRLKTQVKQESNAVDAALRTQGMTM 427 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + LD++ + A + L A+ + + V L A+G G++ Sbjct: 428 ALYTGGLTNYLDVVVAQVAALNARISLVQAQTRQVDARVQLVRALGGGWS 477 >gi|207723425|ref|YP_002253824.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] gi|206588626|emb|CAQ35589.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] Length = 422 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/421 (24%), Positives = 192/421 (45%), Gaps = 39/421 (9%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI--- 109 F D L +L+ +AL N + AT + A + RA PS + +S R Sbjct: 2 FGDPQLQRLIGLALLNNRDLRLATLNVEAVQAQYGIQRAARLPSIDATGSSTRQRAAANR 61 Query: 110 ---PNLKTNSTGQLD-----SDWKIDLFGQRRHIESSLANLDSAYAQV-------DIAKL 154 P + +N Q+ S ++IDLFG+ R + D+A+A+ A++ Sbjct: 62 DANPAIPSNVQEQVGLSIGLSAFEIDLFGRVRSLS------DAAFARYLASDHGRRAAQI 115 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +++S + SY +E++ +A + L ++++++L+ S L + + E ++ + Sbjct: 116 SLVSAVADSYFAELLAQEQLQLAERTLADWRQSLDLARRLKAAYQNSGLDVAQAEGQVAT 175 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E+D+ ++ + + + L+G E M + + + G+P++L+ Sbjct: 176 AEADLEARTRAVALTRNALQLLVG---AELPDRMPRALPLHTQPVVTQLPEGLPSELLYR 232 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLY 331 RPDI+ E+ L + A IG A++ +P LSL S+ + F G W+F P++ Sbjct: 233 RPDIQQAEQNLVAANADIGAARAAFFPRLSLTASLGYASPAMSSLFDGGQRVWNFAPQIT 292 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+F G+++S +R AE ++ V A +EV + L + + AV Sbjct: 293 VPLFQGGRLRSELRLAEVRTSSAVAEYERAVQLAFREVADGLAGRETYGRQIEAQLRAVA 352 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ LS + YR G L++LD +R A + +DL +R + V LY A+G Sbjct: 353 SAERRTELSNLRYRAGTEGRLELLDAQRQLYAARQALLDL---RRSEFGNAVALYKALGG 409 Query: 449 G 449 G Sbjct: 410 G 410 >gi|83945721|ref|ZP_00958066.1| probable outer membrane efflux protein [Oceanicaulis alexandrii HTCC2633] gi|83850922|gb|EAP88782.1| probable outer membrane efflux protein [Oceanicaulis alexandrii HTCC2633] Length = 471 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 105/412 (25%), Positives = 204/412 (49%), Gaps = 13/412 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW ++ L+ L+ AL+ N ++ QA + + ++ R+ PS+ S+ + Sbjct: 57 RWWRLYDSPELDGLITDALENNNSLAQAAASLEQVRASLGEARSARLPSTELSVQGGYAE 116 Query: 110 -PNLKTNSTGQ-----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P + G+ + W++DLFG+ R I ++ ++ +A A D A + V + Sbjct: 117 QPLSQGGYDGEQYGAGFSTSWQVDLFGRVRNAIRAARQDVVAAEAAHDAAAILVAGETAR 176 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ D +S+ + L +++++L+ + G +L +V+ ++ +++ +++P+L Sbjct: 177 AWADYCAGTRLVSVGENNVALAEQSLDLTERLYDAGRGLRLDVVQAQSRLETSRAELPSL 236 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 S V ++TL G E + + P L I +G A L+ RPD+R E Sbjct: 237 RASRDAAVFRLATLTGRTPAEMRAVIP--ACEVAPRLEGAIAVGDVASLLARRPDVREAE 294 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWS--FGPKLYLPIFDKGK 339 +LA + A++G++ + LYPS++L GSI T D G S GP + ++ Sbjct: 295 ARLAAASARVGVSVAQLYPSVTLGGSITSTAFDLGDVGDEDSLSVSLGPLISWSFPNQTA 354 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ +R+AE+ AQ + +TVL A++E E ALT +++ L+ A + ++ L Sbjct: 355 ARARLRQAEAGAQIALAGFDQTVLEALQETETALTVFAAERQRRASLEVARDAAAEAARL 414 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + I Y+ G S + +LD ER A E L+ + A S VD+++A+G + Sbjct: 415 ARIRYQAGSESYIAVLDAERTLANAETALASSDAAAASSEVDVFMALGGRWT 466 >gi|323528889|ref|YP_004231041.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385891|gb|ADX57981.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 514 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 118/450 (26%), Positives = 208/450 (46%), Gaps = 39/450 (8%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTILQAT 79 P+Y +P P T ++ N + T++ WW+ FND +L+ L+ A+ N I Sbjct: 71 PDYKRPDTPA-KTSWTGQNGAPVSAAATIEPEWWKGFNDPTLDSLIAKAIGGNFDIKVLA 129 Query: 80 ERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS---------DWKIDLFG 130 RI+ A+ I +A P+ F +TGQ S +W ID++G Sbjct: 130 ARIDVARTQIGEAKAGALPTMDLGGGADF-----QKTTGQTFSKQYNVATQVNWDIDIWG 184 Query: 131 Q-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 + + +++ A ++ A L ++S + +Y F ++I + L ++ + Sbjct: 185 KVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQILQFDDQIDQQQKTLAANRQILS 244 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 + + G ++ +++ +AEI + + + L +S + + + TL G PA EF + Sbjct: 245 IYEGQRRSGLIAQTQVLRQQAEINRLTNQLLELGRSRDLANNALCTLTGVPAGEF----R 300 Query: 250 KQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG- 307 + Q + +P + G+PA L+ RPDI E ++ ++ +G AK PS+SL G Sbjct: 301 LPKGHLQQRVQLPGVPDGLPAQLLARRPDIVAAEFRVLEAYDLVGQAKLAQLPSISLTGH 360 Query: 308 ----SIALTH-DNSFPGYNTHWSFGPKLYLPIFDKG-KIKSNIRRAESSAQEQYITWQET 361 S ALT SF + F P + +P+ D G + + +A+S+ EQ ++ T Sbjct: 361 GGTASFALTDLLKSF-----TFGFMPSINIPLLDPGVRAHVKVTQAQSTVAEQQ--YRAT 413 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V+ A +EVENAL ++N K +LQ V+ + R G S L++ + ER Sbjct: 414 VMGAFEEVENALVNLNAHKAQRVELQQQVDRLQIVADQIQSQLRLGVVSQLEVFETERTL 473 Query: 422 AKVEVDLSIAKRQLAKS-YVDLYIAIGSGY 450 + L +A QL S V LY A+G G+ Sbjct: 474 LDAQQSL-LANHQLILSDTVLLYKALGGGW 502 >gi|299531721|ref|ZP_07045125.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298720280|gb|EFI61233.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 483 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 21/382 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L+ LV+ A + N + A R+ A+ + S A P AS Sbjct: 68 WWLVFADAELSALVERAGEANADVQTAAARLAEARALLRSADAQRQPQIGASGGAVRQAG 127 Query: 112 LKTNS--------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L T S T L+ ++ DLFG+ R E++ + ++ A + +L V + + Sbjct: 128 LSTASGMQPATLVTAGLNFSYEADLFGRLSRASEAAREDANAREALLQSTRLMVQADVAQ 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + + Q L Y++ + L +F G ++L + +++ E+ + E++ L Sbjct: 188 TYLQLRSLQTERQLVEQSLVAYRETLTLIEKRFRAGDAAELDVARMQTEVSATEAETLAL 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IP-INIGIPADLIRNRPDIRY 280 E+ H ++ L+G AT F + QP L +P I G+PA ++ RPD+ Sbjct: 248 ERQQAALTHALAVLVGDVATGF-------TLAAQPVLATLPVIPAGVPATVLARRPDVSA 300 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + + + A++G+A++ +P+++L G+ + F W G L LPIFD Sbjct: 301 AQASVLAAQARVGVAQAAWFPAITLTGNGGYASPELGDLFKWSARSWGIGALLSLPIFDG 360 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ + A + + + VL A ++VE+ L+++ L AV+ +++ Sbjct: 361 GQRAAQEEGARARLEAAVAAQRGQVLAAFRDVEDQLSALRLLSGQAHVLGQAVQSSERAT 420 Query: 398 SLSMINYRQGRYSLLDILDIER 419 LS + YR G S L++LD R Sbjct: 421 HLSDVRYRNGLVSQLELLDARR 442 >gi|150002842|ref|YP_001297586.1| outer membrane protein oprM precursor [Bacteroides vulgatus ATCC 8482] gi|319642471|ref|ZP_07997122.1| outer membrane protein oprM [Bacteroides sp. 3_1_40A] gi|149931266|gb|ABR37964.1| outer membrane protein oprM precursor [Bacteroides vulgatus ATCC 8482] gi|317385927|gb|EFV66855.1| outer membrane protein oprM [Bacteroides sp. 3_1_40A] Length = 461 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 109/458 (23%), Positives = 209/458 (45%), Gaps = 33/458 (7%) Query: 14 LLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 LL+GC + Y +P P+ N + N+ L W E F D L L Sbjct: 13 LLSGCHIYKSYDRPESIDATGIYRDPVAANDTLAAN--DTTNMGNLSWKEIFRDPKLQML 70 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ L N+ + A R+ AK + S R PS S++ N T Sbjct: 71 IEEGLANNVDMQAAILRVKEAKALLTSARLSYLPSLALAPQGSLTSVDKSTPVKNYTLPA 130 Query: 121 DSDWKIDLFGQ--RRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++DLFG+ H + L S AY Q ++L I + +Y ++S+ Sbjct: 131 SASWEVDLFGKLLNAHRGQKASYLQSKAYQQAVRSQL--IGGIANAYYSLLMLDRQVSVT 188 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + L K+ + G T++ ++ + + E+ + L++ R ++IS LL Sbjct: 189 EQNVALMKETVRTMEAMKEAGMTTEAAVAQSKGAYHQTEASLADLKRQVRETENSISVLL 248 Query: 238 G-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P +++Q + + +G+P L+ NRPD++ E LAD+ A+ Sbjct: 249 AKAPQNIDRGTLEEQV------MPADLAVGVPLQLLENRPDVKAAELALADAYYTTNQAR 302 Query: 297 SDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 S YPS+++ G++ T+ + S P W+ L PIF +GK+ +N++ +++ Sbjct: 303 SAFYPSVNITGTLGWTNGSNGTVISNPAV-MLWNAIGSLTQPIFQRGKLIANLKVSKAEE 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q + +Q+T+L A KEV +AL + K +++ Q V +K++ ++ ++ G+ + Sbjct: 362 QIAKMNYQQTILEAGKEVSDALFLYDTADKKLSEHQAQVSEMQKAVEMNNDLFQAGKATY 421 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+I+ +++ +++ Q ++ ++LY A+G G Sbjct: 422 LEIITAQQSLLSAQLNEVSDTFQRMQAVINLYSALGGG 459 >gi|187924757|ref|YP_001896399.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187715951|gb|ACD17175.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 604 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 109/480 (22%), Positives = 210/480 (43%), Gaps = 38/480 (7%) Query: 2 NILRAIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWW 53 I A ++ +AGC V P+ + + P GN+ N D L WW Sbjct: 8 GIAAAAVLTILLTIAGCASTGGVAPQASG----IEPASLDAGNAIRAANADAQWPALDWW 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP 110 ++ND LN+ ++ A N ++ A R+ A R+ L P S+S ++ Sbjct: 64 RAYNDPQLNQWIEDAQAGNPSLAAAQARVREAMSMAGVARSALSPQVNGSLSIQRQKWAD 123 Query: 111 NL-----------KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 NL N+TG L + +D++G+ ++ E +L ++ A A+L + Sbjct: 124 NLYYGPGPLAGEQSWNNTGTLGLSYHLDIWGKDKNAAERALDAAHASSADARAAQLELEG 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +YI+ + IA L ++ ++L++ + G ++L + + E + E Sbjct: 184 NVVRTYIEMSLNYALLDIAKATLQQQQQIVDLANRRLKGGIGTQLEVSQAETPLPEYERQ 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRP 276 I +E+ + + ++ L G +Q+ S + Q P + +PADLI +RP Sbjct: 244 IDEIEEKIALGRNQLAALAGK-GPGAGDSIQRPSLSLQ---MGPAGLPSALPADLIGHRP 299 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLY 331 D+ +A I +AK+D YP + S+ G A+ F +H WS GP L Sbjct: 300 DVVAARWTVAAQARGIDVAKADFYPDINLLASIGGYAAMGPLFQFLKNPSHSWSAGPALS 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPI D G+++S + A + E + ++++ A+K++ + + I +V Sbjct: 360 LPILDGGRLRSQLGAASAGYDEAVERYNQSIVGALKDISDQVIRIRSLATQADDADRSVA 419 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +K+ LS YR+G L++L + + + ++ + + ++ L A+G G + Sbjct: 420 AARKNYDLSREGYRRGLTDYLNVLIAQNQLLRAQEGVAKIQAERLGAHASLVTALGGGLD 479 >gi|107101835|ref|ZP_01365753.1| hypothetical protein PaerPA_01002880 [Pseudomonas aeruginosa PACS2] Length = 477 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 215/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P Q+ + D +WW++F L+ L++ AL Sbjct: 15 CLLLGACGSTPAPLDSGLAA-PPQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 73 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 74 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRGSGYSGTDATSDNDAVDS 133 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ Sbjct: 134 FSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 193 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 194 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 253 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 254 TLIGEP----VQALQVAERPFDSLRWPETGTGLPSELLSRRPDIANAEAQLAAAQADVQV 309 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 310 ARAALFPKLTLSTSLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 369 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 370 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 429 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 430 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 467 >gi|217976367|ref|YP_002360514.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] gi|217501743|gb|ACK49152.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocella silvestris BL2] Length = 490 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 105/463 (22%), Positives = 194/463 (41%), Gaps = 38/463 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L GC VGP+Y KP P P ++ + L D +WW F D +L+ L+ Sbjct: 20 LCGCAVGPDYMKPSAPT-PIRYKELKGWKTATPLDGADRGQWWAPFRDKTLDSLISQVSI 78 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-------------------SYASISHRFIPN 111 N T++ A AK + +A LFP+ + S S F + Sbjct: 79 SNQTVIGAEAAYRTAKSLVREAQAGLFPTVSLNYSGTGTHSGSKTSGFNTGSSSTLFTSD 138 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L TN++ W D++G RR IES+ A + A + L S L +Y + R Sbjct: 139 LATNAS------WTPDIWGLVRRSIESNAAGAQLSAADLANTTLASQSLLATAYFNLRAA 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + +++ +E++ ++T G SK + +A++ + ++ + Sbjct: 193 DALKDLLERTAKEFQRTLEITQRQYTAGTVSKADVATAQAQLFNTQAQAINAGIARAQYE 252 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H I+ L+G P E L+ P +P+++ P+ L+ RPDI E+ + A Sbjct: 253 HAIAVLIGVPPAE-LNIAVAPFKTTPPT--VPVSL--PSVLLERRPDIAAAERSMQAQNA 307 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+A + YP++SL+G+ N WS G +FD G + + A Sbjct: 308 LIGVAVAAYYPNISLSGAFGFAGRGPLAVSLANEAWSVGVAAAQTVFDGGLRSATVDAAR 367 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ + +++TVL+A + VE+ L ++ + AV ++ + + + Y G Sbjct: 368 ATYDQSVANYRQTVLSAFQGVEDQLVALRLLAQQAKVQDDAVRAAQEEVDVLLNQYSAGT 427 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + ++ + + ++ + V L A+G G+N Sbjct: 428 VAFTAVVVAQAQLLTNQTSALTIRQNRYIATVQLIEALGGGWN 470 >gi|74317374|ref|YP_315114.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] gi|74056869|gb|AAZ97309.1| RND efflux system outer membrane lipoprotein NodT [Thiobacillus denitrificans ATCC 25259] Length = 501 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 113/484 (23%), Positives = 216/484 (44%), Gaps = 45/484 (9%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPL--------LPTQ-----FSIGNSKNLIN--I 47 RA+ + ++ LLAGC VGP++ +P P LP + ++G ++ + + Sbjct: 23 RAVVASAVLASLLAGCAVGPDFKRPAAPTVGTYTAQPLPAETASAPVALGQAQRFADAPV 82 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASIS 105 D WW+ L+ L+ A + + T+ A + A+E + + RA L+P A + Sbjct: 83 DA-AWWQRLGPPKLSALIDAAFEASPTLASAQSTLRQAQE-LHAARAGSTLYPQVDAGLG 140 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDI 151 + L ++ GQ + L+ G RR +E+ A ++ +++ Sbjct: 141 AQRQ-RLSPSALGQAGEPREFSLYNASVGVRYELDLAGGNRRALEALRARVEHRRFELEG 199 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + ++ + I +I + IL + + L+ + G S ++ L+ + Sbjct: 200 ARLTLAANIVTTAITQAMLAAQIDASEAILRAQDEQLALARERERLGQASPDEVLTLQTQ 259 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ + +P L + H ++ L G P + + F +P+ + P++ Sbjct: 260 VEQTRASLPPLRQRLDETAHLLAVLAGRAPGAGDMPSFSLE--EFTLPAELPLVV--PSE 315 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L R RPDIR E + + A+ G+A + LYP L L+ GS AL+ F + WS Sbjct: 316 LARRRPDIRAAEALMHAANAEYGVAVARLYPQLKLSANLGSQALSTGALFGSGSAVWSLV 375 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R + ++ + +Q VL A+++V + L +++ D + L Sbjct: 376 GQLTQPLFNPG-LPAEKRASLAAFEAASANYQGVVLEALRDVADVLRALDHDASALAALA 434 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A E + ++ Y G S LDIL E+ + V+L A+ Q LY A+G Sbjct: 435 SADEAAQGALESMRRRYALGAASYLDILTAEQQAQQTRVNLVAAQAQRLVDNAALYQALG 494 Query: 448 SGYN 451 G+ Sbjct: 495 GGWT 498 >gi|255022117|ref|ZP_05294120.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] gi|254968381|gb|EET25940.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] Length = 471 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 97/423 (22%), Positives = 208/423 (49%), Gaps = 33/423 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW F+ +L+ L+ + L+ + T+ QA ++ A+ + FP S+S Sbjct: 34 EWWTLFHSKALDTLIAVGLKNSPTVAQAQAQLEEARAVARENASIFFPQVSGSLSAE--- 90 Query: 111 NLKTNS---------------TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKL 154 K++S TG L+ + D+FG R + +S A + +++ A+L Sbjct: 91 RAKSSSAAFGGNKGGFRYSLVTGSLNVSYYPDIFGVNRLVYRNSEALVRYQQWELEAARL 150 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ + ++ + +I I+ +K ++L+ ++ GA + LS+V +++ + Sbjct: 151 TLTGNIVTAAVNVAATQAQIEATRAIIAQEQKLLQLTENQYRAGAITYLSVVNQRSQLAA 210 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPAD 270 + +P LE+ + H ++ L+G +PA + + +F+ +L++P I + + ++ Sbjct: 211 EMATLPPLEQQLAVYRHQLAVLVGQFPA-------EAKVPDFRLSDLHLPEKIPVSLSSE 263 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L++ RPDI+ ++ + A IG A++ YP++ L ++ T N F ++ WS Sbjct: 264 LLKQRPDIQAAMAQMQAANAVIGEARAQFYPTVKLTAALGDTASNPNLFFNPISSIWSLV 323 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L PIF GK+++ +A ++ + Y ++ T+L A ++V NAL ++ D + + Q Sbjct: 324 GSLSQPIFQGGKLRAQEAQARAAYEVVYQQYRSTILGAFEQVANALRALEHDAETLKAQQ 383 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A+E + ++ L+ +YR G L +L E ++ + A+ Q + L +A+G Sbjct: 384 EALESARSALHLAESSYRAGATDYLSLLTAEVQYDNAKIAVIKAQSQRYQDTAALLVALG 443 Query: 448 SGY 450 G+ Sbjct: 444 GGW 446 >gi|107021582|ref|YP_619909.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116688074|ref|YP_833697.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105891771|gb|ABF74936.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116646163|gb|ABK06804.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 523 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 112/474 (23%), Positives = 210/474 (44%), Gaps = 47/474 (9%) Query: 13 VLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 VLLAGC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 23 VLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RTDRGAWWTVYNDPQLDALIG 80 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNL------------ 112 N TI Q+ A+ + RA FP+ AS S P Sbjct: 81 RLNASNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRARTPRTSLSSGSSSNFGS 140 Query: 113 -------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y Sbjct: 141 GSTGSINNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTY 199 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + Y+++++L+ ++ QG ++ +++ + +++S ++ Sbjct: 200 FQLRTSDALQKLLDDTVKSYERSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAQIDNGV 259 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI---PIN-IGIPADLIRNRPDIRY 280 + H I+TL+G PA+ F + PN P+ + +P+ ++ RPDI Sbjct: 260 ARAQYEHAIATLIGEPASTF---------SLPPNPLAAEPPVTPVDVPSAILERRPDIAA 310 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++ A + +IG+A S +P+L+L+ GS + F W+ GP+L +FD Sbjct: 311 AERRAAAANEQIGVAISAFFPTLTLSATGGSQSSVWSQLFTLPARFWTVGPQLAATLFDA 370 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + A ++ + ++ VL A ++VE+ L S + + + AV+ + ++ Sbjct: 371 GLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQRQAVDSAEHAL 430 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Y+ G + L++L + + L+ Q S V L A+G G+N Sbjct: 431 AIVTNQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWN 484 >gi|116052245|ref|YP_788911.1| outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115587466|gb|ABJ13481.1| outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 487 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 28/468 (5%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 N+ R +L + LA C+VGP+Y +P P P + + S++L + WW F Sbjct: 7 NLSRLALALAVGTGLAACSVGPDYQRPQSP--PPRVA---SEHLDEFSGERREAPWWSFF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT 114 +D L +LV AL +N I +A + +A+ D P +S A S L Sbjct: 62 DDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQLPQVTSQAGYSRSIEQQLDY 121 Query: 115 NST----------GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + D+ W+IDLFG+ R +++LA ++A A + + +L++ + + Sbjct: 122 DGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARAEAADADLRLVRLSIAADTARA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + ++ R+ +A + ++ +EL+ G+ + +A + E+ IP L Sbjct: 182 YFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSGLPEDVENAQANLLRSEAAIPPLT 241 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + L G + P L + +G LI RPD+ E+ Sbjct: 242 TALESARYRLDVLRGEAPGSGAPILD--GGGAAP-LAKNLPLGDVDRLILQRPDVVSAER 298 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 +LA S +G A ++LYP L L G I + + P + P F G ++ Sbjct: 299 QLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDLGSASRAFELAPSVSWPAFRLGNVR 358 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R E+ + +Q ++L A ++V NAL + E ++ + L + ++ ++ Sbjct: 359 ARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQLAEHQRRLVALFQSATHGANALEIAN 418 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G S L +L+ +RA ++ +L+ A+ + + LY A+G G Sbjct: 419 ERYRAGAGSYLAVLENQRALYQIREELAQAETASFVNVIALYKALGWG 466 >gi|226228395|ref|YP_002762501.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] gi|226091586|dbj|BAH40031.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] Length = 502 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 110/506 (21%), Positives = 213/506 (42%), Gaps = 90/506 (17%) Query: 13 VLLAGCTVGPE-YTKPHMPLLPTQFSIGNSKNLIN-IDTLK------------------- 51 +LL C VGP +P +P + + S G S + +D+L+ Sbjct: 20 LLLGACAVGPSTRVRPDVPSVTARASSGPSADTRQFLDSLRTARAQDGKDSLARITSRLA 79 Query: 52 ---------------WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL 96 W E D++L L+++A+ N + A +RIN Sbjct: 80 AESIDLVASGSSAPAWTEVLRDSTLESLIRVAVSNNRNLRVAQQRINE------------ 127 Query: 97 FPSSYASISHRFIPNLKTNST------------------GQLDSD--WKIDLFGQRRHIE 136 F + + RF P + +T ++ SD W++D +G+ R Sbjct: 128 FRALRGVAASRFFPQINVGTTMGTNKIALAAAPPIEFDAARVTSDLAWELDFWGRTRRAT 187 Query: 137 SSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 + A D A + D+ L+++S + +Y+ R I+IA Q L + ++L+ + Sbjct: 188 QA-AGFDVAAREDDVRATTLSLVSDVANTYLQLREADAVITIAEQTLVSREATLQLARRR 246 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-ISTLLGY-PAT----EFLHYM 248 F QG S+L + + EA + + + + R + N +S LLG P T + L + Sbjct: 247 FEQGLISELDVRQFEATVADPAARVADFTRQ-RTELENALSVLLGTSPQTITRGQLLSDI 305 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 K N +P ++ DL+ RPD+ + + A+IG+A++ P++S+ G Sbjct: 306 VKTVN-------VPDSLS--GDLLARRPDVLRAQHDFQAATARIGVAQAARLPTVSITGQ 356 Query: 309 IAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 T+ F G ++ + +P+F G++ S + A++ A++ T+++ VL A Sbjct: 357 YGAQRPTYGTIFDGRGEIYTLQAGISVPLFTGGRLSSEQKAAKARAEQSRNTFEQVVLVA 416 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 ++E +A + + + Q + +++ Y G S L++LD +R + Sbjct: 417 LREASDAAAGVRLRRDQLAAQQTQERALLAAFTIAERRYASGISSYLEVLDAQRGLFAAQ 476 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +RQ + V L+ A+G G+ Sbjct: 477 LTRVQVERQYLAATVQLFRAVGGGWQ 502 >gi|29348746|ref|NP_812249.1| outer membrane protein oprM , multidrug resistance protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340652|gb|AAO78443.1| outer membrane protein oprM precursor, multidrug resistance protein [Bacteroides thetaiotaomicron VPI-5482] Length = 461 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 200/455 (43%), Gaps = 27/455 (5%) Query: 13 VLLAGCTVGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P + P + + + N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPEDITASGLYRDPAADNDTLASDTTNFGNLPWREVFTDPQLQSLIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-QLDS 122 L+QN +L A + AA+ +++S R PS S F N T + + + Sbjct: 73 QGLKQNTDLLSAALNVKAAEASLMSARLAYAPSIGLSPQGTISSFDKNAATKTYSLPVTA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DLFGQ +R+ + +L AY Q + VI+ + Y ++ I Sbjct: 133 SWQVDLFGQLLNSKRNAQVTLKQTK-AYRQA--VQTQVIANIANMYYTLLMLDRQLEITQ 189 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ K+N E + + +L + +A + + IP +E+S R + +ST LG Sbjct: 190 ATAEVLKRNAETVQALSERSTYTSAALAQSKAAYAQVVASIPDIEQSIRETENALSTFLG 249 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 E H +++ Q L ++ GIP L+ NRPD++ E LA A++ Sbjct: 250 ----EAPHAIKRGVLEAQA-LPEELSAGIPLQLLSNRPDVKAAEMSLASCYYNTNSARAA 304 Query: 299 LYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP ++L+GS T+ PG + G L P+F +G + ++ A++ ++ Sbjct: 305 FYPQITLSGSAGWTNSAGSAIINPGKLLASAIG-SLTQPLFYRGTNIARLKAAKAQEEQA 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++Q+T+ NA EV NAL+ K Q VE KK+ + + G + L++ Sbjct: 364 KLSFQQTLYNAGSEVSNALSLYQNTSKKAESRQMQVESAKKASEDTKELFNLGTSTYLEV 423 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +++ ++ ++ V LY A+G G Sbjct: 424 LSAQQSYLSAQISQVSDCFDKMQAVVSLYQALGGG 458 >gi|312794840|ref|YP_004027762.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312166615|emb|CBW73618.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 550 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 116/467 (24%), Positives = 212/467 (45%), Gaps = 43/467 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GC VGP+YT+P + +P F ++ + D WW + DT L+ L+ Sbjct: 72 GCAVGPDYTRPSV-TVPASFKEATPGWKVAQPADHQDRGNWWAIYRDTQLDTLMDRLNAA 130 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASIS---------------------HRFIP 110 N T+ Q A+ RA FP+ S S H + Sbjct: 131 NQTVAQFAAAYRQARALTAEARASGFPTLSGSASGSRAGSGSASHGTTTSGVAAGHSRVS 190 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N + S LD+ W+ DL+G R + S A +A A + A+L+ + L +Y R Sbjct: 191 NSFSTS---LDASWEADLWGGIARAVASQKAGQQAAAAALANARLSAQAALAQNYYLLRT 247 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + + Y++ +EL+ ++ QG + +++ + +++S +S Sbjct: 248 SDAQQKVLDETVAAYQRTLELTQNQYKQGIVPRSDVIQAQTQLQSAQSVALGNGIDRAQY 307 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L+G PA+ F + + P IP+++ P+ L+ RPD+ E+K A + Sbjct: 308 EHAIAVLVGEPASTF--SLPPAPLDVTPPA-IPVSL--PSALLERRPDVASAERKAAAAN 362 Query: 290 AKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +IG+A + +PSL+L+ S L P + WS GP+L IFD G + + Sbjct: 363 EQIGVAMAAFFPSLTLSAQEGFSSSVLAQLVRAP--SRFWSLGPELAASIFDAGLRSAKL 420 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A ++ EQ +++TVL A++EVE+ LTS+ + + Q +V+ ++++ + + Y Sbjct: 421 DAARAAYDEQVAVYRQTVLAALQEVEDNLTSLRILAQQIALQQASVDSAQQALDIVLNQY 480 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + L +L + + + L Q + V L A+G G++ Sbjct: 481 KAGTVAYLSVLTAQASLLSAQQALQSLAGQRMTASVGLIKALGGGWD 527 >gi|167617372|ref|ZP_02386003.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily [Burkholderia thailandensis Bt4] Length = 507 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 106/455 (23%), Positives = 206/455 (45%), Gaps = 27/455 (5%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN LV Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKVAQPAD--RADRGPWWSIYDDPQLNALVDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTNSTGQ-----L 120 N T+ Q A+ + RA FP+ S + S T + G L Sbjct: 85 SNQTVAQYAAAYRQARALVAQARASYFPTLGLTASESRASSALSSGTTTRTIGNTYNVGL 144 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R + Sbjct: 145 DASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQKLLDD 204 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+TL+G Sbjct: 205 TVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQAAAIDNGIARAQYEHAIATLVGE 264 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A + Sbjct: 265 PASTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVAIAAF 319 Query: 300 YPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P+L+L+ S F WS GP+L +FD G + A ++ + Sbjct: 320 FPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYDQDVA 379 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ VL+A ++VE+ L S ++ + + AVE + ++ +++ Y+ G + L++L Sbjct: 380 AYRAAVLSAFQDVEDNLASQRILEQEIAVQRQAVESARHALDITLNQYKAGTVAYLNVLT 439 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + LS Q S V L A+G G++ Sbjct: 440 AQTTAFSAQQKLSTISGQRMVSSVGLVKALGGGWD 474 >gi|300697769|ref|YP_003748430.1| outer membrane drug efflux lipoprotein, RND efflux system domain [Ralstonia solanacearum CFBP2957] gi|299074493|emb|CBJ54044.1| putative outer membrane drug efflux lipoprotein, RND efflux system domain [Ralstonia solanacearum CFBP2957] Length = 508 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 109/428 (25%), Positives = 201/428 (46%), Gaps = 39/428 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+ FND +L+ L A + + T+ A R+ A+ + S RA LFP A Sbjct: 80 WWKLFNDATLDGLEAQAAEASPTLAAAAARVGQARAIVQSNRAALFPELDAGFGPTRQRA 139 Query: 103 SISHRFIP-----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +P +T Q ++ DLFG+ R + ++ A+ + A A+L++ Sbjct: 140 SAASAGLPVGAPVQPQTYWRAQATVAYEADLFGRVRNSVSAADADAERVEALYRAARLSL 199 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + + ++ ++L +F G +L + + +AE+ + Sbjct: 200 QADVAQTYFSLRTLDAEEALLARTVVGREEALKLVQRRFNTGDIGELDVARADAELATAR 259 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 S+ + + + H ++TLLG + F L Q+ + + + G+P+ L+ R Sbjct: 260 SERIDVARRRAVLEHALATLLGKAPSGFTLPATPLQAADLR------VPPGLPSALLERR 313 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD--NSFPGYNTHWSFGP---- 328 PD+ E+ +A + A+IG+A++ +P L L G +HD + + W GP Sbjct: 314 PDVAAAERAMAAANARIGVARAAFFPQLQLTGGFGFESHDLGDLLKWSSRTWLLGPLVGT 373 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKL 386 L LPIFD G + +++A ++ +E ++E VL A +EVE+ L+ + D+ V Sbjct: 374 ALSLPIFDGGARSAGVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQSKVQ-- 431 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLY 443 AV ++ LS Y G + LD++D ER + +V V LS + + V L Sbjct: 432 DDAVRASTRAAQLSRTRYNAGSVNYLDVIDAERNMLSAQRVAVQLSGGR---VNATVGLV 488 Query: 444 IAIGSGYN 451 A+G G+ Sbjct: 489 KALGGGWG 496 >gi|268680503|ref|YP_003304934.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurospirillum deleyianum DSM 6946] gi|268618534|gb|ACZ12899.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurospirillum deleyianum DSM 6946] Length = 464 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 102/454 (22%), Positives = 210/454 (46%), Gaps = 17/454 (3%) Query: 10 LFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L +L AGC ++ PEY +P+ P+ P+ F + S + L W + SL +V A Sbjct: 8 LIPLLFAGCMSMAPEYIRPNAPI-PSSFDVNTSVQKSTLQDLAWEAFVREPSLQAVVAQA 66 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----- 123 L+ + + +A I A+ ++ FPS AS + + ST +S Sbjct: 67 LENSRNLKKAVANIEMARATYRVSKSAQFPSIDASATGSKARTISGESTAISESSSATVG 126 Query: 124 ---WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++D FG+ + E+SL ++ +I++ + ++++ K +++A Q Sbjct: 127 LSSYELDFFGKVKSQSEASLQTYKGVEEAEKTVRIALIAETMNAWLNYAADKTLLTLAEQ 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + K+++++ + G +K+SL ++ + +D+ + + L+G Sbjct: 187 TKESAKRSLDVVQKRVDLGVDTKVSLFNAQSVYEQARADVANYTTQVAQDRSALELLVGA 246 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + ++ K + + +G+ + ++ NRPD++ E L + A IG+A++ Sbjct: 247 KVADV--HLPKGLEEGAHAWLLDVPVGLSSGVLLNRPDVKEAEYNLKSANANIGVARAAY 304 Query: 300 YPSLSLN--GSIAL-THDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS++L G + T F G + WSF P + LPIFD G+ +N+ A++ + Sbjct: 305 FPSITLTTKGGVGTNTLTGLFDGGTSKIWSFAPTVTLPIFDMGERDANLEYAKAKRELYL 364 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++ T+ A EV++AL+ + + + VE + KS ++ Y+QG + L+ L Sbjct: 365 ASYEATIQTAFSEVQSALSRRSTIFEQYEAQKALVEANAKSYAIYDARYQQGVDTYLNTL 424 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R+ + L + + + V LY +G G Sbjct: 425 LSQRSFYSSQKTLINVRLEELANRVTLYRVLGGG 458 >gi|172063190|ref|YP_001810841.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171995707|gb|ACB66625.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 498 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 196/424 (46%), Gaps = 30/424 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHRF- 108 +WW F L++LV A + + T+ +A R++ A++N A + P A++S Sbjct: 77 RWWTQFGSEPLDRLVDTAWRNSPTLAEARARLDEARQNHAAEAGATMLPRVDANLSATRE 136 Query: 109 ------------IPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 +PN T + + +D+FG RR +E+ A +D +D A+ Sbjct: 137 KVDIAAFGLPANVPNPGPFTLYDASVSVSYALDVFGGNRRALEALRAQVDYQAYTLDAAR 196 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + ++ + I +++++ Q++D + + + +F G S+ + A + Sbjct: 197 LTLAGNVVATAILRASLAQQVALTRQLVDAQARQLRIVEARFAAGGVSRADVHAQRALLA 256 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPNLYIP--INIGIPAD 270 ++ +P L H ++ LLG P + E L + + L +P + + +P+ Sbjct: 257 QTQASLPPLAARHAQAGHRLAILLGAPPSGEALPDLTLDA------LALPRTLPVALPST 310 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L R RPDIR E L + A +G+A ++LYP S++ I + G N W+ G Sbjct: 311 LARERPDIRAAEAVLHRASANVGVATANLYPRFSISAGIGSERTRIADIVSGLNV-WNVG 369 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L P+F G++++ R AE++ + +++ETVL A+++V +A+ ++ D + Sbjct: 370 LGLAQPLFHGGELRARKRAAEAAYDAAFASYRETVLLALQQVADAMRAVEHDAAELQARD 429 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + S +++ Y G SL+D+LD +R + ++ + A+ L+ A+ Sbjct: 430 DAAQQAAASRAIAGDRYAAGGISLIDLLDAQRQVLQTALERTRAQADRLADTAALFQALA 489 Query: 448 SGYN 451 + Sbjct: 490 GNWT 493 >gi|120611198|ref|YP_970876.1| RND efflux system outer membrane lipoprotein [Acidovorax citrulli AAC00-1] gi|120589662|gb|ABM33102.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax citrulli AAC00-1] Length = 485 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 103/475 (21%), Positives = 203/475 (42%), Gaps = 41/475 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL-------------INIDTLKWWESFN 57 + LL+ CT+ P +P P+ G + + L W + F Sbjct: 9 LLALLSACTLTPPLERPAPPVPAVFPDYGGRAGAAASLSPGTSVRPDVPVADLGWRDMFE 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHR-------- 107 D L +L+ AL+ N + A + A + R+ +P AS S Sbjct: 69 DPRLQRLIAAALEHNRDLRLAALQAEAVQAQYRIQRSARWPEVALDASASRERGARSGTG 128 Query: 108 -------FIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISK 159 + G S +++DLFG+ R + +++LA ++ A++ ++ Sbjct: 129 AGAAGSAGAAVSGQAALGVGVSAFELDLFGRVRSLSDAALARYLASEHGHRAAQITLVGA 188 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y R +E++ + + L +++++EL+ L G S L +V+ E ++ + E+D+ Sbjct: 189 VADAYFAQRLAQEQLQLTVRTLSDWRQSLELARLWRQAGQNSGLDVVQAEGQVAAAEADL 248 Query: 220 PTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +++ + + LLG P + ++ L G+P+ L+ RPD+ Sbjct: 249 EARQRALDQADNALRLLLGSDPPAVLPEPLPLEARPVAARL----PAGLPSGLLLARPDL 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPI 334 E+ L + A +G A++ +P ++L S+ D+ G+ T W F P++ P+ Sbjct: 305 LQAEQALVAAHADVGAARAAFFPRIALTASVGRASDSLGGLFDAGWGT-WRFAPQITQPL 363 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD+G+++ +R A+ E + ++ + A +EV +AL + + V Sbjct: 364 FDRGRLRGELRLAQVRRSEAVVQYERAIQVAFREVADALAGAATYGRQIDAQARTVASAA 423 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + LS + YR G L++LD R + L +R + V LY A+G G Sbjct: 424 RRVELSELRYRAGTDGRLELLDARRQQYAAQQALLDLRRAELGNAVALYKALGGG 478 >gi|15597587|ref|NP_251081.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|9948432|gb|AAG05779.1|AE004665_6 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] Length = 474 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 216/461 (46%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C P + P+Q+ + D +WW++F L+ L++ AL Sbjct: 12 CLLLGACGSTPAPLDSGLAA-PSQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLN 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------TNST-------- 117 + + A R+ A+ + + A L P A++ L+ T++T Sbjct: 71 SQDLGAAVARVRQAQASAVIAGAPLLPELNATLGASRQKLLRDSGYSGTDATSDNDAVDS 130 Query: 118 --GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + +++D +G R+ S+L +L ++ +L ++S + SY+ +E+ Sbjct: 131 FSAGLSASYEVDFWGGRQAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQ 190 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA LD + + L + G+ + L + + + + S +P LE+ + ++ Sbjct: 191 RIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G P + +Q F + G+P++L+ RPDI E +LA + A + + Sbjct: 251 TLIGEP----VQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAAQADVQV 306 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E Sbjct: 307 ARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEE 366 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T+++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL Sbjct: 367 LLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLT 426 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ +R A V L +A+ Q + V LY A+G G+ Sbjct: 427 VLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 464 >gi|326571537|gb|EGE21552.1| RND system membrane channel OprM [Moraxella catarrhalis BC7] Length = 507 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 198/421 (47%), Gaps = 22/421 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 ++ +L+W E + + L L+++ALQ N + A + +A+ A P ++ S Sbjct: 62 SVASLRWQEFYTNPKLAALIELALQNNKDLQSAVLAVQSARAQYQITEAGSVPQVGSNTS 121 Query: 106 ------HRFIPNLKTN-STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 +R N TN G S +++DL+G+ + +L + A D ++++I Sbjct: 122 VTRQANNRIDANASTNYHVGLAMSGYELDLWGKVASQKQQALHQYLATNAAKDAVQISII 181 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y++ H + +A Q L + + ++ +F G SK ++ + ++S Sbjct: 182 SSVAQGYVNLAHALAQRQLAEQTLKTREHAMMITQKRFEAGIDSKSPSLQAASSLESARL 241 Query: 218 DIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + S + + L+G P E L + + + G+P++L+ RP Sbjct: 242 AVYAADTSILKAKNALQLLIGRPVPNELLPAIDASMHMGHITTQTLFSAGLPSELLYYRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLP 333 DI E +L + A I +A++ +PS+ L+ ++ + + N F WSFGP + LP Sbjct: 302 DIMQAEHRLKAAGANINVARAAYFPSIRLSSNVGFSSNSLNNLFESSALGWSFGPAISLP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL- 392 IFD G ++N A+ + Q + +++ + NA KEV + L E + +L + L Sbjct: 362 IFDAGSRRANHEMAQVAQQSALVDYEKAIQNAFKEVSDVLA---ERATLGLRLDAQIRLQ 418 Query: 393 --HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 ++++ ++ +R G + L +LD ER+ + + I + +LAK S + LY A+G Sbjct: 419 DNYRQTYDIAYARFRSGLDNYLTVLDAERSLFINQQN--ILQLELAKLVSQIQLYQALGG 476 Query: 449 G 449 G Sbjct: 477 G 477 >gi|221067229|ref|ZP_03543334.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220712252|gb|EED67620.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 482 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 108/479 (22%), Positives = 210/479 (43%), Gaps = 38/479 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKP---HMPLLPTQFSIGNSKNLINIDTLKWWESFN 57 ++ +RA+ L+AGC+V P T+ P +P +S + + WW++F Sbjct: 5 LHTVRALPLALAFLMAGCSV-PSLTRAPDSAQPAVPASWSAERAAGGASAVQTGWWQAFG 63 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS- 116 D L+ V++AL +N +L A R+ A+ N+ D+ S+ A P S Sbjct: 64 DAQLSHWVELALARNNDVLTALARVEEARANL-----DVTGSAAAPQLSLSAPGSANRSL 118 Query: 117 ---TGQ----------LDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIP 162 TGQ L + W++DL+ + + + L ++ A D +L V + + Sbjct: 119 SARTGQMVHVRSAQPVLQASWELDLWDRLGSLSRAADQRLQASQADRDAVRLTVAATVAQ 178 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI R + ++++A + + + L + G S+L + AE++S+ + L Sbjct: 179 AYIALRSLQAQLAVAEDTVKSREDAVRLLTDQVRVGYISQLQQSQALAELESVRQSVQQL 238 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + + L+G + L + + S L G+P+ L+ RPD Sbjct: 239 SLALQRQRIALMQLVGGSGDDQAQALALSSLSEHSGLESMGLPAMPAPGLPSGLLERRPD 298 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIF 335 I + LA S + + ++ P +SL+ + N+ YN WS G + P+F Sbjct: 299 IARAQLLLAASDSNLAAQRAAFLPQVSLSANFGSLFINALD-YNPARVWSLGGSILAPLF 357 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK- 394 + G+++ A + + ++ V+ A +VE AL S +++ + +HA E K Sbjct: 358 NGGRLQGQFDTASAQRDQAAYAYRGVVIKAFGDVETALVS---SRQLQAQWEHAKEREKV 414 Query: 395 --KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + Y G S L+ LD +R V+ ++ ++ ++ V LY A+G G+ Sbjct: 415 LGRTLGFAKDRYEAGYASYLEELDAQRNLFAVQQEVLRLRQSQLENAVALYQALGGGWQ 473 >gi|83719194|ref|YP_440579.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83653019|gb|ABC37082.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily [Burkholderia thailandensis E264] Length = 539 Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 106/455 (23%), Positives = 206/455 (45%), Gaps = 27/455 (5%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN LV Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKVAQPAD--RADRGPWWSIYDDPQLNALVDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTNSTGQ-----L 120 N T+ Q A+ + RA FP+ S + S T + G L Sbjct: 85 SNQTVAQYAAAYRQARALVAQARASYFPTLGLTASESRASSALSSGTTTRTIGNTYNVGL 144 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R + Sbjct: 145 DASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQKLLDD 204 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+TL+G Sbjct: 205 TVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQAAAIDNGIARAQYEHAIATLVGE 264 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A + Sbjct: 265 PASTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVAIAAF 319 Query: 300 YPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P+L+L+ S F WS GP+L +FD G + A ++ + Sbjct: 320 FPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYDQDVA 379 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ VL+A ++VE+ L S ++ + + AVE + ++ +++ Y+ G + L++L Sbjct: 380 AYRAAVLSAFQDVEDNLASQRILEQEIAVQRQAVESARHALDITLNQYKAGTVAYLNVLT 439 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + LS Q S V L A+G G++ Sbjct: 440 AQTTAFSAQQKLSTISGQRMVSSVGLVKALGGGWD 474 >gi|87199730|ref|YP_496987.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium aromaticivorans DSM 12444] gi|87135411|gb|ABD26153.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium aromaticivorans DSM 12444] Length = 488 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 115/477 (24%), Positives = 213/477 (44%), Gaps = 34/477 (7%) Query: 4 LRAIFSLFIV--LLAGCT-VGPEYTKPHMPLLPTQ------FSIGNSKNLINIDTLKWWE 54 LR++ +V LLAGCT VGP Y P Q F+ + L +WWE Sbjct: 11 LRSMAGALVVAALLAGCTTVGPNYA--GAPDAAPQAVSRGTFARAGADALAAAPAARWWE 68 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----- 109 S D LN+LV+ AL I A R+ ++ + + R + P S + +I Sbjct: 69 SLGDPVLNQLVEQALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAAPYINVPGG 128 Query: 110 ---PNLKTNSTGQL-------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 PN ++ ++ D+ W+IDLFG RR IE++ A ++A A A++ + + Sbjct: 129 LLSPNGESGGRDEINAYNLGFDAAWEIDLFGGTRRKIEAASARAEAAEASAADARVTLSA 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ R + + + + +++ ++ L+ +F G + + EA+ S E+D Sbjct: 189 EIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEAQAFSSEAD 248 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + + I+ L G P T + + +G PA L+R+RPD Sbjct: 249 LAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVP---LPPAQVAVGDPALLLRSRPD 305 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPI 334 IR E++LA + A +G +D +P +S G + L + ++ G P++ + Sbjct: 306 IRAAERQLAAANADVGSRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQIKWSL 365 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + + A + E ++ TVL+A+++ E +L + K A + Sbjct: 366 FDGGRAERQVEAARGAFAEAEANYRRTVLSALQDAEGSLARFGAQRVAFGKALDAETRAR 425 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ L G D LD ER ++ + + A+ +L +V + A+G G+ Sbjct: 426 RNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLGWT 482 >gi|298388030|ref|ZP_06997577.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] gi|298259210|gb|EFI02087.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] Length = 458 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 111/464 (23%), Positives = 224/464 (48%), Gaps = 37/464 (7%) Query: 7 IFSLFI-VLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDTSLNK 63 I LF+ V L+GC + Y +P + + + S+ +++ +++ +L W E F D L + Sbjct: 8 IICLFLSVGLSGCHIYRAYERPDEVVADSLYRQSVA-AEDTVSLASLSWKELFTDPQLQQ 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPNLKTNSTGQL- 120 L+ I ++ N + A R+ A+ +LS + PS + KT+ T L Sbjct: 67 LIDIGIRNNTDLNIARLRVEEAEALLLSSKLAYLPSVSLTPQGTMSSAGGTKTSKTYNLA 126 Query: 121 -DSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +DW++D+FG+ + + + A L+ + A + +++ + SY +++ I H Sbjct: 127 ASADWELDIFGKLTNAKRGAKAVLEQSEAYRQAVQTQLVATIANSYYTLLMLDKQLDITH 186 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + + +N+ G T+++++ + EA S ++ + ++E+ +++S LLG Sbjct: 187 RTAETWDENLRAMKALKKAGQTTEMAVAQTEATKLSTDASVLSIEQQISELENSLSALLG 246 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ + S F +L + G+P L++ RPDIR +E +LA + A+S Sbjct: 247 MT-SQTVKRSTLDSQEFPESL----STGVPLQLLQRRPDIRQKEAELAAAFYATNQARSA 301 Query: 299 LYPSLSLNGSIALTHDNSF----PGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 YPS++L+GS T+ PG W S L P+F++G+ +N++ ++ + Sbjct: 302 FYPSITLSGSAGWTNSAGGVIVNPG---QWLLSAVGSLVQPLFNRGQNIANLKITKARQE 358 Query: 353 EQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLSMINYR 405 E +T+++++L+A EV +AL + K+ V LQ AV + M S NY Sbjct: 359 EALLTFRQSLLDAGAEVNDALVQWQTARGRLRLSKQQVASLQSAVRSSELLMRHSSQNY- 417 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L + + E+ ++ + + ++LY A+G G Sbjct: 418 ------LEVLTARQTLLQAELSVASNRFDEIQGVINLYHALGGG 455 >gi|30248553|ref|NP_840623.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30138439|emb|CAD84449.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 471 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 206/461 (44%), Gaps = 27/461 (5%) Query: 11 FIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 F++ ++GC PE + + +P+ +S S N + KW ESF+D L LV+ AL Sbjct: 13 FVMFVSGCHTAPERQANRLDVSVPSVWSA--SANTFPLAGQKWVESFDDPVLYSLVEQAL 70 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---------L 120 N + A R++AA A L+P + +++ +++ G Sbjct: 71 TSNFDLKTAVARVDAAIAQARIDGAALWPQLSFAPGYQYT-QVRSAGFGSAQYSVFEALF 129 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + W+ D++G+ R E++ +++ A A+L++ +++ +Y K + +A Q Sbjct: 130 NLSWEADIWGRIRSFREAARQEVEATNADFQAARLSLAARVAQNYFALLEAKLQAQVAEQ 189 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 + L +F +G L + + ++ S + ++ + LLG Sbjct: 190 SVADRGTIASLVQGRFERGLVRALEVRLVLTDLAQARSQLAAARNQVQLVTRQLEILLGD 249 Query: 239 YPATEFLH----YMQKQSNNFQPNLYIP---INIGIPADLIRNRPDIRYQEKKLADSVAK 291 YP + + L +P + G+PA+L+ RPD+ +L + A+ Sbjct: 250 YPDGSLPQIDDTVTALSGSTIRQALPVPPSQLPAGLPAELLTRRPDLIASFARLRAADAR 309 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + L P ++L + T D++ + W+ P+F G+I+ +I+ Sbjct: 310 LESTSKLLLPRITLTAAGG-TRDSALTDLIDPRSVVWNLFAGAVQPLFTGGRIRGSIQLN 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ +E + +Q+ LNA +EVE AL + + +L+ AV+ + L++ +YRQG Sbjct: 369 EAYVEEAFNRYQDVALNAFREVEQALAAEEWLRAQEKELREAVQQTEAGQELALYSYRQG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L +LD R+T + +RQL + V+LY+A+G Sbjct: 429 FIQILTLLDSYRSTLNAQSAHLAVRRQLLNNRVNLYLALGG 469 >gi|238892870|ref|YP_002917604.1| copper/silver efflux system outer membrane protein CusC [Klebsiella pneumoniae NTUH-K2044] gi|238545186|dbj|BAH61537.1| outer membrane transport protein involved in copper/silver tolerance [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 461 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 104/456 (22%), Positives = 211/456 (46%), Gaps = 25/456 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL---INIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + + W F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPVAPV-PQQFSLSQNKLVTAKVGYQETGWRTFFVDPQVKSLIST 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD +P S + LK ++T L+ Sbjct: 71 ALTNNRDLRMATLKVQEARAQYRVTDADRYPQLNGDGSTTYGGKLKGDTTTSSDYAAGLN 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 131 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVANDT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 191 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ + + + + ++ RPDI E L + A IG A++ + Sbjct: 249 --SYQHLPDDSASSAVDLQGVTLPPSLSSAILLQRPDILEAEHSLQAANANIGAARAAFF 306 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS++L S++ + F +N W+F PK+ LPIF+ G+ ++N+ AE Q+Q + Sbjct: 307 PSITLTSSLSGSSSELFSLFNAGGAMWNFIPKIELPIFNAGRNQANLDLAEIRQQQQVVN 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A KEV +AL + Q + ++ + YR G S +++L Sbjct: 367 YEQKIQSAFKEVADALAQRQSLADQIAAQQRYLASLNITLQRATALYRHGAVSYIEVLSA 426 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 427 QRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|294146953|ref|YP_003559619.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292677370|dbj|BAI98887.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 465 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 103/430 (23%), Positives = 206/430 (47%), Gaps = 40/430 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C G EY +P +PL P F N+ ++ WW F D L+ LV L+ + Sbjct: 19 CAAGTEYRRPALPL-PAAFH--NAPLIVEPGGRPWWRDFADPMLDDLVARGLKGGFDVEA 75 Query: 78 ATERINAAKENILSVRADLFPSSY---ASISHR------------FIPNL-KTNSTGQL- 120 A R++ A+ S RA PS +++ R ++P+ +T + +L Sbjct: 76 AMARVDQARAAAGSARAARMPSGSLDGSAVRTRQSLRAGLGQIADYVPDFDRTQDSFELV 135 Query: 121 -DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + W++DL G +R E+++A L++A A +L V +++ +YI R + R SIA Sbjct: 136 GGASWELDLAGGLKRGREAAVAELEAAVADSQAVRLTVAAEIGDAYILLRSAQRRRSIAV 195 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 +K + +F GA ++ L + A +I + I +++ + + ++ L G Sbjct: 196 DQAAAAQKLENIVRARFVHGAAARFELDQSRASTAAIRAGIAEFDQAAQAQLARLAVLAG 255 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 + +++ +P +P+ +G+PADL+R RPD+ E+++A A++G+ Sbjct: 256 GLPDSVVQALERP----EP---VPVAGFAAMGLPADLMRRRPDLVAAERRVAAGHARLGV 308 Query: 295 AKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A ++ YP +L+G + +++ F G + G L +FD G++ + + RA+ + Sbjct: 309 ALAEYYPKFTLSGLLGFQGNDAGRLFSGPASVVQGGLGLRWRLFDFGRVDAEVARAKGAE 368 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN--YRQGRY 409 +E ++ L A ++VE A+ + ++ + HA E+ + + ++ YR G Sbjct: 369 REAIAQFRNAALRAAEDVERAVVAWRTARE--REAVHAEEVRAATAACDALDRAYRAGHV 426 Query: 410 SLLDILDIER 419 SL ++++ +R Sbjct: 427 SLAELVEAQR 436 >gi|262280958|ref|ZP_06058741.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257858|gb|EEY76593.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 496 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++D +WW F D LN+L Sbjct: 41 LLTSSLVGCAAVVKTPYEIPAVQV-PGSFQYDATKAKTMSVDQYSDRWWTLFGDAQLNQL 99 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L SS S H F N +S L Sbjct: 100 VSNVLERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSM 159 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 160 SAGVSYEVDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATA 219 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L +++ GA S + L + E ++S ++ + +E+ I+ LL Sbjct: 220 QQSLATSQKLYQLVQIQYKAGAVSGVDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 279 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P L + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 280 HEP----LQQLNIQEPKRLPRNALPAIGAGLPADILSRRPDLQASELRLKKALATKDATK 335 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP +K +I + ++ Sbjct: 336 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAI 395 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 396 IQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLL 455 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 456 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 487 >gi|114797632|ref|YP_760883.1| putative outer membrane efflux protein [Hyphomonas neptunium ATCC 15444] gi|114737806|gb|ABI75931.1| putative outer membrane efflux protein [Hyphomonas neptunium ATCC 15444] Length = 595 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 215/470 (45%), Gaps = 48/470 (10%) Query: 14 LLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTS 60 LL+ CT VGP+YT P +S ++ D K WW +F D Sbjct: 130 LLSSCTTVGPDYTAP------------DSDRYVSTDFAKAAPYDDAAPLSDWWTAFEDPV 177 Query: 61 LNKLVKIALQQNLTILQATERINAAKENI-LSVRA----DLFPSSY----------ASIS 105 L L+K ++N T+ AT + A+ ++ L+ RA D +SY I+ Sbjct: 178 LESLIKRGFEENRTLAAATANLRLARADLGLAQRARLPDDTLEASYLETRQSSAAFTGIA 237 Query: 106 HRFIPNLKTNSTGQLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P +T L + W++DLFG+ R IE++ A +A A + ++ + + + Sbjct: 238 DDAPPGTETFGIPSLSVAAGWEVDLFGRVDRLIEAADARAGAAEAALADMQIVIATDIAA 297 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R +++ +A + ++ ++ +L G S L L + AE+ E+ +P L Sbjct: 298 AYLSVRGLRDQRDVARRNVENLRETSDLVRDLRDVGRVSDLELDQAHAELALTEAFLPAL 357 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 S + ++ L+G E Y+ S + PI IG PA L+R RPDI +E Sbjct: 358 NASITDAENRLAVLIGATPQEIGAYLADDSPLAM--IKAPIAIGDPAALLRRRPDIAERE 415 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 + LA + A IG+ ++ +P +SL G + D+ +++ GP+L + + Sbjct: 416 RLLAAATAGIGLNIAEAFPRISLLGEAGVRSVGIDDLLSERALNFAAGPQLAWSVTGLIR 475 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +R A +SA + +++TVL A+ E E AL ++ + T+L+ A + +L Sbjct: 476 AGDRVRAARASADAAFAMYEQTVLQALAETETALERQSQLQARSTRLEEAHAAATSAAAL 535 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + G L++LD ER L+ A+ ++A + V ++ + +G Sbjct: 536 ATFRFETGTADFLNVLDAERVELDTANQLAAARSEVALAQVAVFRVLRAG 585 >gi|264679318|ref|YP_003279225.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262209831|gb|ACY33929.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 480 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 34/427 (7%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N ++ W + + D +L +L++ AL N A R+ A+ A P+ S Sbjct: 50 NTASIAWQDFYLDQNLQELIRAALAHNQDQRLALLRVQEAQAAYDIQSAARLPTIGLGSS 109 Query: 106 H---RFIPNLKTNSTGQLDSD---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 H R +L + + D W++DL+G+ + + E++L N Y +D Sbjct: 110 HGRARVPADLNASGRSVVAGDQQVFVGLNSWELDLWGRVKSLSEAALGN----YLALDAT 165 Query: 153 KLNVISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + V S L+ +Y+ R ER+++ + + ++++ + + G+TS+ +L ++ Sbjct: 166 QHAVQSSLVKQVALNYLALRSLDERLALTQRTIASREESLRIFKRRTEVGSTSRYALTQV 225 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + + ++ L + + + + L G A QS++ L PI G+P Sbjct: 226 QTLVHQAKAIGTQLAQQRSLQANALQQLTGMDADRL-----PQSSSTAVILK-PIPEGLP 279 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ RPDI E L + A + +++ P ++L GS D F + W Sbjct: 280 SDLLTQRPDIIAAEYGLQAAKANVAASRAAFLPRIALTGSWGTASAELDGLFRSGSRAWQ 339 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS--INEDKKIV 383 F P + LPIFD G+ ++N+ + +++T+ A++EV +AL+S + E + +V Sbjct: 340 FAPMISLPIFDGGQRQANLNLQAVRQNMAIVQYEKTIETAMREVLDALSSRTMLEQQLVV 399 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 Q A K+ L+ + Y QG LD+LD ER E L + L + V LY Sbjct: 400 LTEQRAA--LKERARLARLRYDQGASPYLDVLDAERDLLSAEQQLVQGREALLSTQVALY 457 Query: 444 IAIGSGY 450 A+G GY Sbjct: 458 AALGGGY 464 >gi|312959496|ref|ZP_07774013.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] gi|311286213|gb|EFQ64777.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] Length = 485 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 112/472 (23%), Positives = 214/472 (45%), Gaps = 33/472 (6%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLINIDTLK--WWESFN 57 +++ SL + +L+GC++ P+Y +P P+ QF G +S N + W + F+ Sbjct: 3 KSLLSLAVTAFVLSGCSLIPDYQRPEAPVA-AQFPQGPAYSSAQAPNQTAAEQGWKQFFH 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNS 116 D +L +L++ AL N + A I+A RADLFP+ S R K + Sbjct: 62 DPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGNGSRSRTPAKLSQ 121 Query: 117 TGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +GQ S +++DLFG+ R + E +L + ++++++ + +Y Sbjct: 122 SGQATIASQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAY 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP--TL 222 + + KE + + L Y+++ +L+ G S L L + +++ + T Sbjct: 182 LTWQADKELLKLTQDTLGAYEQSFKLTSRSNEVGVASALDLSQARTSVENARVALARYTR 241 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + N + G PA S +L + G+P+DL++ RPDI E Sbjct: 242 QVAQDENSLTLLLGTGLPAN-------IASKPLSDDLLSEVPAGLPSDLLQRRPDIVQAE 294 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +PS+SL G+ + T F G + WSF P++ +PIF+ G Sbjct: 295 YNLKAANANIGAARAAFFPSISLTASAGTASPTLGGLFKGGSGTWSFAPQINIPIFNAGS 354 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++++ ++ + +++ + +EV + L + K+ + + ++ L Sbjct: 355 LRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFAAANQDYYRL 414 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G S L LD +R + L + + V+LY A+G G+N Sbjct: 415 AERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTAEVNLYKALGGGWN 466 >gi|212694239|ref|ZP_03302367.1| hypothetical protein BACDOR_03765 [Bacteroides dorei DSM 17855] gi|254882516|ref|ZP_05255226.1| multidrug efflux pump channel protein [Bacteroides sp. 4_3_47FAA] gi|317480619|ref|ZP_07939707.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] gi|329965210|ref|ZP_08302141.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|33468443|emb|CAD89791.1| hypothetical protein [Bacteroides ovatus] gi|212663226|gb|EEB23800.1| hypothetical protein BACDOR_03765 [Bacteroides dorei DSM 17855] gi|254835309|gb|EET15618.1| multidrug efflux pump channel protein [Bacteroides sp. 4_3_47FAA] gi|316903245|gb|EFV25111.1| NodT family efflux transporter [Bacteroides sp. 4_1_36] gi|328523573|gb|EGF50670.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 452 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 102/450 (22%), Positives = 215/450 (47%), Gaps = 26/450 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQ---FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LAGC Y++ H P L T+ + + + I +L W E F D L L++ L+ Sbjct: 14 MLAGCGT---YSRYHRPDLSTENLYRDMPADIDTMTIASLSWREMFTDPKLQSLIETGLE 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSDWKI 126 +N + A R+ AA+ +++ R PS + + + KT + G + W++ Sbjct: 71 RNADLNVARLRVEAAEAVLMTARLSYLPSLGLTAEGNANKHDGATAKTYNVGA-SASWEL 129 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D+FG+ + A L + A + +++ + SY +++I+++ L+ ++ Sbjct: 130 DIFGKLTAAKRGAAAALQGSRAYRQAVQTQLVATIADSYYTLAMLDAQMTISNRTLENWR 189 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + G +++ +++ +A + +E+ + ++ KS + +S +L P+ Sbjct: 190 TTVRTLEALKKVGKSNEAGVLQAKANVMRLEASLLSIRKSISETENALSAILAMPS---- 245 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 H + + S+ + ++IG+P L+ NRPD+R E +LA + A++ YP+++L Sbjct: 246 HSIGR-SDLAEAAFPDTVSIGVPLQLLSNRPDVRQAEMELAQAFYATNAARAAFYPNITL 304 Query: 306 NGSIALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +G + T++ PG W L P+F++G +N++ A+S +E + ++ Sbjct: 305 SGILGWTNNGGGVIVNPG---QWLLNAIGSLTQPLFNRGVNIANLKIAKSRQEEAKLLFR 361 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++LNA KEV +ALT+ K + VE ++ + R + L++L ++ Sbjct: 362 QSLLNAGKEVNDALTAWQTAKSQIEINARQVETLCDAVRKTESLMRHSNTTYLEVLTAKQ 421 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + EV + + +S + LY A+G G Sbjct: 422 SLLEAEVQQLQTRFERIQSIIKLYHALGGG 451 >gi|285017162|ref|YP_003374873.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283472380|emb|CBA14885.1| putative outer membrane efflux protein [Xanthomonas albilineans] Length = 479 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 208/460 (45%), Gaps = 30/460 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN----IDTL---KWWESFNDTSLNKLVKIAL 69 GCT+ P Y +P P+ P + ++ DTL W F D L + + +AL Sbjct: 19 GCTLAPHYVRPAAPV-PANLAAADASAAHAAGQPADTLVMPDWQAVFLDPRLRQTIALAL 77 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNSTG--QLD----- 121 Q N + A I+ A+ RA PS AS S R + ++ TG Q++ Sbjct: 78 QNNRDLRVAMLSIDKARAQYRIQRAAQLPSLDASASQNRERVSAASSDTGVSQINVSDTL 137 Query: 122 ----SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S W++DLFGQ R + + +L N L SA Q + +L++I+++ +++ + +++ Sbjct: 138 QVGLSSWQLDLFGQLRSLKQEALQNWLASAQTQRSV-RLSLIAQVAAAWLTVAADQAQLA 196 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q LD + ++L+ + + G S L L + + +++ + + Sbjct: 197 LAQQTLDSQTQTLQLTERQHSVGTVSALDLAQQQTSVEAARVSAASAATQLAQARDALQL 256 Query: 236 LLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P L Q + P+ + + ++ RPD+ E L + A IG Sbjct: 257 LVGAPVDAALLPSAQAIDRSV---ALAPVPAHLSSSVLLKRPDVLAAEHSLQAANADIGA 313 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PSLSL S + D F WSF P + PIF G +K+++ ++ Sbjct: 314 ARAAFFPSLSLTASTGRSSDALSTLFSAGARTWSFVPSITAPIFHGGALKASLDASKIGK 373 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++ + +A EV +AL + + + +T Q V+ ++S +L+ YR G Sbjct: 374 DIAVAQYEKAIQSAFAEVADALAAKDHMEAQLTAQQALVDASQRSYTLADARYRAGLDGH 433 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R+ + L + Q A + V LY +G G + Sbjct: 434 LAVLDAQRSLFAAQQALIALRLQDASNRVTLYQVLGGGAD 473 >gi|319793371|ref|YP_004155011.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315595834|gb|ADU36900.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 461 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 208/464 (44%), Gaps = 34/464 (7%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPL-LPT---QFSIGNSKNLINIDTLKWWESFNDTS 60 A+ SL + + L GCT+ + PL +P Q G +WW +FND Sbjct: 7 ALGSLAVAMALGGCTLFQPEQRAQRPLEVPGAWQQPQTGTPSAAAAFPA-RWWRAFNDPQ 65 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-- 118 L+ L++ AL+ N + A R+ A+ +L PS S +LK Sbjct: 66 LDGLIEDALRTNNNLAAAGIRVQRAQLQAGLANTNLTPSVVGQTSTGRSYDLKRGGVAGS 125 Query: 119 ----QLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKE 172 + ++ DL+G R + S A+ + + D L+++ Y + + Sbjct: 126 SSTSLVTLSYEFDLWG-RLAAQRSAADWEQKATESDRQATALSLVGTTSGLYWQVGYLNQ 184 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 RI ++ ++ ++ + L K+ GA S L + + + S E+ L + R+ N Sbjct: 185 RIVLSEAGMEDARRILALVRAKYAAGAVSGLDVAQAGQNLASQEAAHTQLLQQ-RVEARN 243 Query: 233 -ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ L P Q + PN+ +P I+ G+PA L+ RPD+R E++L S+A Sbjct: 244 ALAILFDRP-----PETAAQEPSQLPNIALPTIDAGLPASLLSRRPDLRAAEQRLRGSLA 298 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + ++ YP+LSL GS+ T + N + G L LP + + ++ Sbjct: 299 NVDATRTSFYPALSLTGSLG-TSSTALGELLKNPVATLGAGLALPFLQWNTARLTVAVSQ 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTKLQHAVELHKKSMSLSMINY 404 + +E + +++++ A+ EVEN L+S +E +K+V LQ A +++ +LS + Y Sbjct: 358 TQYEEAVLGFRQSLYTALSEVENTLSSRTQLRDESEKLVVALQQA----QRAETLSEVRY 413 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 R G +L +LD + E+ L++ + + + LY A+G Sbjct: 414 RAGATALQPVLDAKDRRRSAEISLALNRLNQLNATMTLYKALGG 457 >gi|260556112|ref|ZP_05828331.1| RND efflux transporter [Acinetobacter baumannii ATCC 19606] gi|260410167|gb|EEX03466.1| RND efflux transporter [Acinetobacter baumannii ATCC 19606] Length = 496 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 122/457 (26%), Positives = 206/457 (45%), Gaps = 29/457 (6%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ +WW F DT LN+L Sbjct: 41 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDRWWTLFRDTQLNQL 99 Query: 65 VKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 V L++N +T+ QA R+ A ++ + + L SS S H F N +S Sbjct: 100 VTNVLERNSDLAVAGITLQQA--RLQA---DLTANKQGLRTSSSVSTGHSFDLNSGDDSA 154 Query: 118 GQLDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L +++DLFG+ R E+S + + ++I+ Y + E Sbjct: 155 KGLSMSAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNE 214 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R + A Q L +K +L ++ GA S L L + E ++S ++ + +E+ Sbjct: 215 RYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTA 274 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ LL P + + Q P +P I G+PAD++ RPD++ E +L ++A Sbjct: 275 IAVLLHEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALAT 330 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 K+ YPS+SL S+ + + N + G L LP +K +I + Sbjct: 331 KDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLD 390 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G + Sbjct: 391 YEKAIIQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVA 450 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L +LD ++ T + L K+ +YV L A+G Sbjct: 451 LKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALG 487 >gi|161522904|ref|YP_001585833.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189348265|ref|YP_001941461.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346457|gb|ABX19541.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189338403|dbj|BAG47471.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 497 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 40/472 (8%) Query: 4 LRAI-FSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +RAI + + LL+GC ++ P + P+ P F ++ +W F D L Sbjct: 18 MRAIALAAGMGLLSGCLSLAPPDERAAAPI-PASFPDPSADATPATPVPEWQAYFVDARL 76 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVR-ADLFPSSYASISH-RF-IPN---LKTN 115 L+ AL +N + A R+ A+ + +R AD +P+ A ++ RF P Sbjct: 77 RALIGQALAENRDLRAAVARVEQARA-VYGIRSADQWPTIGAGAAYARFRTPGGFLTPAP 135 Query: 116 STGQL------DSDWKIDLFGQRRHIESSLANLDSA---YAQVDIAK----LNVISKLIP 162 GQL ++ W++D +G+ R+++ D+A Y D AK L+V++ + Sbjct: 136 VIGQLYEVQLAETQWELDFWGRVRNLK------DAALQRYLASDAAKRAVTLSVVTGVAN 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + ++ ERI++ +D ++++ + L+ GA S+L L + E ++ ES L Sbjct: 190 ADLNLCEIDERIALTRATIDTRRESLRIFRLRHAAGAISRLDLTQSEILLQQAESLGVQL 249 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 +++ ++ L+G P + P+L G+P+ L+ RPD+ E Sbjct: 250 QQARATAADALALLVGAPPALADTPLALDDGAVLPSLAP----GLPSSLLTRRPDVIAAE 305 Query: 283 KKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 +L + A IG A++ +P ++L +GS AL HD G WS P + LP+ D Sbjct: 306 HELQATRANIGAARAAFFPRIALTSAIGSGSSAL-HDLLSSGAGV-WSVIPNVTLPLVDG 363 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +SN+ + + E +++T+ A ++V +AL + + V + + + Sbjct: 364 GRNRSNLALSHAQRDEALAQYEKTLQRAFRDVSDALAARHWLADQVAIERATLASQAERA 423 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + Y G L++LD +R E L + +R L S V LY A+G G Sbjct: 424 RLAKLRYDSGATRFLEVLDAQRDLMNAEQQLVMTRRALLSSRVALYGALGGG 475 >gi|304383953|ref|ZP_07366410.1| FusA/NodT family multidrug resistance protein [Prevotella marshii DSM 16973] gi|304335031|gb|EFM01304.1| FusA/NodT family multidrug resistance protein [Prevotella marshii DSM 16973] Length = 464 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 120/465 (25%), Positives = 212/465 (45%), Gaps = 47/465 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDT-----LKWWESFNDTSLNKLVK 66 VL++ C + +Y +P + + ++ + L+ DT + W F D L L+ Sbjct: 17 VLMSSCGLYNKYQRPDVNTKGLVRDVQSATDTLVVADTASFGNMPWRSVFTDPQLQTLID 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYAS-----ISHRFIPNLKTNSTGQLD 121 AL N +L A + A+ +++ + PS S S P KT S + Sbjct: 77 RALTSNTNLLSAALNVKMAESQLMAAKLAFVPSFTFSPQGTIASWDGNPATKTYSL-PVS 135 Query: 122 SDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W +DLFG Q+R S +A + + Q+ + K VIS + Y +++I Sbjct: 136 ASWSVDLFGNLLSQKRS--SQMALMATRDYQL-VVKTKVISNVANMYYTLLMLDRQLAIV 192 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L K E+ L+ G + ++ +A S+++ L + R + +S LL Sbjct: 193 TDMESLTKDTWEMMKLQKELGGARETAVASAQANYYSVQTQAADLRRQIRETENALSLLL 252 Query: 238 GYPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA +++QS L ++ G+ ++ NRPD+ Y E LA I A+ Sbjct: 253 AQPAQNIARGKLEEQS------LPSELSTGVAVHMLNNRPDVHYAEMSLAQCFYNIQTAR 306 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESS 350 S YP+++++G+ A T+++ PG W S L PIF +G+I + ++ A++ Sbjct: 307 SRFYPNITISGTGAFTNNSGMGIVNPG---KWLLSAVGSLVQPIFQRGQIIAGLKVAKAQ 363 Query: 351 AQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ Y TWQ VL A EV NAL N +K + Q V L +K++ + ++ GR Sbjct: 364 YEQAYNTWQNAVLTAGSEVSNALVLYNTSQEKSRIEAQRVVTL-EKNVDYNKDLFQMGRS 422 Query: 410 SLLDILDIER-----ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +++ ++ AKV D + K Q + V+LY A+G G Sbjct: 423 TYFEVISAQQNLLNARLAKVSDDFT--KMQ---AVVNLYYALGGG 462 >gi|184158143|ref|YP_001846482.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|16118479|gb|AAL14441.1|AF370885_3 AdeC outer membrane protein [Acinetobacter baumannii] gi|183209737|gb|ACC57135.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|323518084|gb|ADX92465.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] Length = 465 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 106/459 (23%), Positives = 217/459 (47%), Gaps = 25/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I S + L C V + +P + +P FS +S +I + K E +D L +++ Sbjct: 12 ILSTLSIALVAC-VNMQAPQPAITSHIPQNFSQNHSGKMIAEKSYK--EFISDPKLLQVI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPN--LKTNST 117 +I+L N + AT I ++ + P+ + +S PN + T Sbjct: 69 EISLNNNRDLRTATLNIERVQQEYQITKNSQLPTIGVTGNAVRQVSPSINPNNPVSTFQV 128 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D +G+ +++ +++L N + + + ++ +IS + +++ + +++ Sbjct: 129 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQIGLISNITQVWLNYAFAQANLNL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L L+ +F G S++ L + + +++ +D+ T + + + + L Sbjct: 189 AEQTLKAQVDAYNLNKKRFDVGIDSEVPLKQAQISVETARNDVATYKTQIQQAKNLLDLL 248 Query: 237 LGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G+P + L H +Q + F+ N G+P+DL+ +RPD++ E +L + A IG Sbjct: 249 AGHPVPQNLLPDHAIQNIT--FEKNFAA----GLPSDLLNHRPDLKAAEYELRVAGANIG 302 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ ++P++SL GS + F N WS GP + LPIFD G K+NI+ AE+ Sbjct: 303 AAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAETD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A +EV +AL + + + + V + LSM Y+ G S Sbjct: 363 QKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATAATYKLSMARYKAGVDS 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + +++Y +G G Sbjct: 423 YFTVLDAQRSAYAAQQGLLALEQIKLNNQIEIYKVLGGG 461 >gi|153807245|ref|ZP_01959913.1| hypothetical protein BACCAC_01523 [Bacteroides caccae ATCC 43185] gi|149130365|gb|EDM21575.1| hypothetical protein BACCAC_01523 [Bacteroides caccae ATCC 43185] Length = 467 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 117/462 (25%), Positives = 208/462 (45%), Gaps = 39/462 (8%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 17 ALLSSCHIYKSYDRPEDITTSGLYRDPIAENDTLVSDTTNFGN---LPWREVFTDPQLQS 73 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-Q 119 L++ L+QN +L A + + AA+ ++LS R PS S F N T + Sbjct: 74 LIEAGLKQNTDLLTAAQNVKAAEASLLSARLAYAPSLGLSPQGTISSFDKNAATKTYSLP 133 Query: 120 LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W++DLFGQ +R+ + +L AY Q + VIS + Y ++ Sbjct: 134 VTASWQVDLFGQLLNSKRNAQVTLKQ-TKAYRQA--VQTQVISNIANMYYTLMMLDRQLE 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNVHN 232 I ++ KKN E A ++ +E A + + IP +E+S R + Sbjct: 191 ITKSTAEILKKNAETME-AMKDAAMYNINSTGVEQSKAAYAQVLASIPDIEQSIRETENA 249 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +ST LG E H +++ + Q L ++ G+P L+ NRPD++ E LA Sbjct: 250 LSTFLG----EAPHAIKRGTLEAQV-LPTELSAGVPIQLLSNRPDVKAAEMALASCYYNT 304 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A++ YP ++L+GS T+ PG + G L P+F +G+ + ++ A+ Sbjct: 305 NSARAAFYPQITLSGSAGWTNSAGSAIINPGKLLASAVG-SLTQPLFYRGQNIARLKAAK 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +++Q+ +LNA EV NAL+ + + V + VE KK+ + + G Sbjct: 364 AQEESAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRRLQVESAKKASEDTKELFNLGT 423 Query: 409 YSLLDILDIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSG 449 + L++L +++ ++ +S Q+ ++ V LY A+G G Sbjct: 424 STYLEVLSAQQSYLSAQISQVSDCFDQM-QAVVSLYQALGGG 464 >gi|113866449|ref|YP_724938.1| outer membrane exporter of multiple drugs [Ralstonia eutropha H16] gi|113525225|emb|CAJ91570.1| outer membrane exporter of multiple drugs [Ralstonia eutropha H16] Length = 496 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 91/404 (22%), Positives = 195/404 (48%), Gaps = 29/404 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---------- 99 +WW F +L+ ++ AL + T+ QA R+ A+EN+ + A +P+ Sbjct: 69 QWWTLFRSPALDATIRSALDTSPTLAQARARLREAQENLAARTGATRWPAVDAKLNTTRQ 128 Query: 100 --SYASISHRFIPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKL 154 + S+ IP+ T + + +DLFG QRR +E A +D +++ A+L Sbjct: 129 QVDFQSLGITAIPSPGPFTLYGATVQVSYVLDLFGGQRRELEGLQAAVDYQRYELEAARL 188 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + + I + +++ + ++ + ++ + G +++ + + AE+ Sbjct: 189 ALAANVATAAIREAGLRAQLADTAAVAAAQQRQLGITEERLRSGGVARVDVQRQRAELAQ 248 Query: 215 IESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 ++ +P L++ H ++ G PA+ L + +L++P + + +PA L Sbjct: 249 AQALVPALQRQLDATRHQLAVYTGQTPASATLPEFRLD------DLHLPDTLPVSLPATL 302 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 R RPDIR E L + A IG+A ++LYP ++L+ G+ A + F N WS Sbjct: 303 ARRRPDIRAAEALLHQASANIGVATANLYPQITLSASGGTQATAARDLFSSLNV-WSLAA 361 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F G++++ R AE++ ++ +++ VL ++ V ++L ++ D + + Sbjct: 362 GLVQPVFRGGELQARKRAAEAAYEQSLAAYRQAVLQGLQNVADSLRALETDAAALRERAD 421 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + + ++++ Y+ G S L +LD ER + + ++L+ A+ Sbjct: 422 SARQARDTLAVVSEQYQLGGVSQLTVLDAERQSRQASLELAQAR 465 >gi|39935638|ref|NP_947914.1| RND efflux system outer membrane lipoprotein NodT [Rhodopseudomonas palustris CGA009] gi|192291219|ref|YP_001991824.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris TIE-1] gi|39649491|emb|CAE28013.1| possible outer membrane efflux protein [Rhodopseudomonas palustris CGA009] gi|192284968|gb|ACF01349.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopseudomonas palustris TIE-1] Length = 482 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 109/469 (23%), Positives = 208/469 (44%), Gaps = 34/469 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + S + GC + + P + L P ++ + + L WW F L +L++ Sbjct: 16 VASALVAASGGCILTQDLPDPALDL-PNRYKAASRTAVEKPPALDWWRGFRSAELTQLME 74 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLKT 114 A NL + A RI A A L PS S ++IS+ I + Sbjct: 75 EAQTVNLDVAAAVARIRQADAQARITGAALLPSLSGSGNGSQVKTSGSNISNTTIAGRRY 134 Query: 115 NSTGQLDSDW-KIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFK 171 ++ S +ID +G + H + A + + D L ++ + +Y + Sbjct: 135 STYSSSLSASYEIDFWG-KNHDAALAAEETATANRFDRDTVMLTTMASVANAYFQVLAAQ 193 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +RI A + + ++ + G + L + + E+ + + + +P L + NV+ Sbjct: 194 DRIRTAEGNIKSASRILDAIKQRLKAGTGTDLDVAQQESVLANQRAALPPLRLTLAQNVN 253 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 ++TL+ P K + L P + G+P+DL+ RPDIR QE +LA + A Sbjct: 254 ALATLVARPPESV-----KIAGGSLTRLSSPRVTPGLPSDLLTQRPDIRRQEAQLASATA 308 Query: 291 KIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +G A++ +P++ L S AL + F T + L PIFD G+I+ N Sbjct: 309 NVGSARAQFFPTIQLTAQGGYQSAALA--SLFTPQATFSNIAAGLTQPIFDGGRIQGNFD 366 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ +E T+++TV++A +V+NAL SI ++ + + + V +++ L+ R Sbjct: 367 LTQAQQEELLQTYRKTVVSAFADVDNALESIKQNTERLRLQREVVASSRRAFDLAEQQLR 426 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 G ++ +L+ + + E ++ + QLA+ + V L+ A+G G+ P Sbjct: 427 AGTSDIVTVLNTQLTLFQAED--ALIQTQLARFQAIVSLFQALGGGWEP 473 >gi|262381865|ref|ZP_06075003.1| multidrug efflux pump channel protein [Bacteroides sp. 2_1_33B] gi|262297042|gb|EEY84972.1| multidrug efflux pump channel protein [Bacteroides sp. 2_1_33B] Length = 456 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 104/432 (24%), Positives = 201/432 (46%), Gaps = 42/432 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 47 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEAALMTSRLS 97 Query: 96 LFPS----------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ----RRHIESSLAN 141 PS S+ + N+ +++ W+ID+FG+ +R +++L+ Sbjct: 98 YLPSLSLDPQGTTSSFDKAKASWTYNVPVSAS------WEIDIFGRLTNAKRQAKAALSQ 151 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + + +++ + G T+ Sbjct: 152 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQYEITTETAVKWLESLRTTQALMAAGMTT 208 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + ++ + EA SIE+ + L ++ R + ++ LLG + + + + + P+L Sbjct: 209 EAAVSQTEATCYSIETSVKDLGQTIRETENTLAVLLGETPQD-IERGRLEDQSLTPDL-- 265 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF--- 317 IGIP ++ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 266 --AIGIPVQMLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIVN 323 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 324 PGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQAQ 382 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K + H +E + ++ + + G + L++L ++ ++ + + Sbjct: 383 TAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDELQ 442 Query: 438 SYVDLYIAIGSG 449 + V+LY A+G G Sbjct: 443 ATVNLYQALGGG 454 >gi|115358438|ref|YP_775576.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115283726|gb|ABI89242.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 501 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 196/424 (46%), Gaps = 30/424 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN-ILSVRADLFPSSYASISHRF- 108 +WW F L++LV A + + T+ +A R++ A++N A + P A++S Sbjct: 80 RWWTEFGSEPLDRLVDTAWRNSPTLAEARARLDEARQNHAAEAGATILPRVDANLSATRE 139 Query: 109 ------------IPNLK--TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 +PN T + + +D+FG RR +E+ A +D +D A+ Sbjct: 140 KVDVAAFGLPTNMPNPGPFTLYDASVSVSYALDVFGGNRRALEALRAQVDYQAYTLDAAR 199 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + ++ + I +++++ Q++D + + + +F G S+ + A + Sbjct: 200 LTLAGNVVATAILRASLAQQVALTRQLVDAQARQLRIVEARFAAGGVSRADVHAQRALLA 259 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPNLYIP--INIGIPAD 270 ++ +P L H ++ LLG P + E L + + L +P + + +P+ Sbjct: 260 QTQASLPPLAARHAQAGHRLAILLGAPPSGEALPDLALDA------LALPRTLPVALPST 313 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFG 327 L R RPDIR E L + A +G+A ++LYP S++ I + G N W+ G Sbjct: 314 LARERPDIRAAEAVLHQASANVGVATANLYPRFSISAGIGSERTRIADIVSGLNV-WNVG 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L P+F G++++ R AE++ + +++ETVL A+++V +A+ ++ D + Sbjct: 373 LGLTQPLFHGGELRARKRAAEAAYDAAFASYRETVLLALQQVADAMRAVEHDAAELQARD 432 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + S +++ Y G SL+D+LD +R + ++ + A+ L+ A+ Sbjct: 433 DAAQQAAASHAIAGDRYAAGGISLIDLLDAQRQVLQTALERTRAQADRLADTAALFQALA 492 Query: 448 SGYN 451 + Sbjct: 493 GNWT 496 >gi|218261249|ref|ZP_03476121.1| hypothetical protein PRABACTJOHN_01785 [Parabacteroides johnsonii DSM 18315] gi|253571750|ref|ZP_04849156.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|218224155|gb|EEC96805.1| hypothetical protein PRABACTJOHN_01785 [Parabacteroides johnsonii DSM 18315] gi|251838958|gb|EES67043.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 452 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 100/450 (22%), Positives = 212/450 (47%), Gaps = 26/450 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQ---FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + AGC Y++ H P L T+ + + I +L W E F D L L++ L+ Sbjct: 14 MFAGCGT---YSRYHRPDLSTENLYRDVPADIDTTTIASLSWREMFTDPKLQSLIETGLE 70 Query: 71 QNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSDWKI 126 +N + A R+ A + +++ R PS + + + KT + G + W++ Sbjct: 71 RNTDLNVARLRVEATEAVLMTARLSYLPSLGLTAEGNANKHDGATAKTYNVGA-SASWEL 129 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D+FG+ + A L + A + +++ + SY +++I+++ L+ ++ Sbjct: 130 DIFGKLTAAKRGAAAALQGSRAYRQAVQTQLVATIADSYYTLAMLDAQMAISNRTLENWR 189 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + G +++ +++ +A + +E+ + ++ KS + +S +L P+ Sbjct: 190 TTVRTLEALKKVGKSNEAGVLQAKANVMRLEASLLSIRKSISETENALSAILAMPS---- 245 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 H + + SN + ++IG+P L+ NRPD+R E +LA + A++ YP+++L Sbjct: 246 HSIGR-SNLAEAAFPDTVSIGVPLQLLSNRPDVRQAEMELAQAFYATNAARAAFYPNITL 304 Query: 306 NGSIALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +G++ T++ PG W L P+F++G +N++ A+S +E + ++ Sbjct: 305 SGTLGWTNNGGGVIVNPG---QWLLNAIGSLTQPLFNRGTNIANLKIAKSRQEEAKLLFR 361 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++LNA KEV +ALT+ K + VE ++ + R + L++L ++ Sbjct: 362 QSLLNAGKEVNDALTAWQTAKSQIEINARQVETLCDAVRKTESLMRHSNATYLEVLTAQQ 421 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + EV + + +S + LY +G G Sbjct: 422 SLLEAEVQQLQTRFERIQSVIKLYHVLGGG 451 >gi|73539942|ref|YP_294462.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72117355|gb|AAZ59618.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 488 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 99/413 (23%), Positives = 186/413 (45%), Gaps = 33/413 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRF- 108 WW+ F+D +L ++++ AL QNL + + R++ A+ A L P S S++ + Sbjct: 70 WWKGFDDPALTRIIERALAQNLDLAASVARVDQARAAADYAGAALLPEGSLSGSVARQRQ 129 Query: 109 ------------IPNLKTNST---GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA- 152 P + N+T + W+ID+ G R + A + Sbjct: 130 SLESPLGKIASKSPGFERNNTLYNAGAGASWEIDIAGGLRRGAEAADAEAQAAEAEHLGV 189 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ V ++ +Y R ++RI+IA Q + + ++L L+ G ++ + EA + Sbjct: 190 RVLVAAEAADAYFRVRGAQQRITIAQQQVQTNARLLDLVKLRLADGIGAERERAQAEARL 249 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 IP L+ ++ + L+G P T + P IP+ G PA L Sbjct: 250 AQTRVTIPPLQIELDTQLNRLDVLMGAAPGTYAAELATPGARTGVPQ--IPLAQG-PAAL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPD+ E++LA S A+IG+A ++ YP LSL G +L+ F + Sbjct: 307 LERRPDVIAAERRLAASSARIGVATAEYYPKLSLAALLGFESLSASKMFTAATFQPAAMA 366 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L +FD G++ + + +A + E T+++++L A ++VENA+ ++ + + L Sbjct: 367 GLRWRLFDFGRVDAEVAQARGANAEALATYRKSMLRATEDVENAIVTLTQLQLQSQDLTV 426 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 V+ +S + Y+ G SL ++L+ +R L A+ Q A++ D Sbjct: 427 EVDAQARSRGAAEEAYKGGAVSLFEVLEEDR-------QLLAARDQQARAGTD 472 >gi|94267415|ref|ZP_01290873.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] gi|93452020|gb|EAT02720.1| RND efflux system, outer membrane lipoprotein, NodT [delta proteobacterium MLMS-1] Length = 316 Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 81/313 (25%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 +V+ +L + ++ +Y + + + + ++L ++N+ L + ++ G +L+L + Sbjct: 1 EVENFRLLLHGEVARTYFALQTLDHELRLLEKTVELRRQNLRLINSRYAGGLVDRLALSQ 60 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL----HYMQKQSNNFQPNLYIP- 262 E+E+ E+++ L + H ++ LLG ++ F + + + +IP Sbjct: 61 AESEVGQAEAELIALRQQRAEFEHALALLLGESSSRFALPRREHDDAGTGDKALTRHIPT 120 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----P 318 I+ G+PA L++ RPD+ E++L + A+IG AKS +P++ L GS + P Sbjct: 121 IDPGLPAALLQRRPDVAAAERRLMAASARIGAAKSAFFPTIRLTGSAGFGSNELATLLNP 180 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 G N WS G +L P+ D G+ ++ + +AE++ E+ +++T+L A KEV++AL ++ Sbjct: 181 G-NRLWSLGGQLAQPVLDGGRSRAGLEQAEAAYFEELANYRQTILQAFKEVDDALLALKL 239 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 ++ Q A+ ++S+ LS YR G S L++L+ ERA +E + Q ++ Sbjct: 240 LEQQQQAQQRALGATRQSVELSRQRYRAGLVSYLEVLESERAALGLERAVLNTAGQRLQA 299 Query: 439 YVDLYIAIGSGYN 451 + L A+G G+ Sbjct: 300 NLSLIKALGGGWR 312 >gi|311747278|ref|ZP_07721063.1| outer membrane lipoprotein [Algoriphagus sp. PR1] gi|126578990|gb|EAZ83154.1| outer membrane lipoprotein [Algoriphagus sp. PR1] Length = 483 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 220/473 (46%), Gaps = 69/473 (14%) Query: 24 YTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI 82 Y P +P+ F I G+S N ++ W + F D+ L L+ +AL++N +L+ E+I Sbjct: 23 YEIPEKNEIPSAFEIEGDSSN--SLANQSWEQFFEDSRLKNLINLALEKNFDLLKTMEKI 80 Query: 83 NAAKENILSVRADLFPS----------SYASISHRFIPNLKTNSTGQLDSD--------- 123 A + + + P + + + N TN + + D Sbjct: 81 QIANAQMRMGKMGMLPQINGVLGASQKKFGKYTMDGVGNYDTNFSTNITEDEKIPDPYRD 140 Query: 124 --------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 W+ID++G+ ++S+A + ++ + +++++ A+ + + + Sbjct: 141 FSVGAQFSWEIDIWGKYSNRKKASIARWMATQQAANLVQTQLVAQV------AKLYYQLV 194 Query: 175 SIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + +I+ L KKNI + F G ++L++ + EA + +S + E+ + Sbjct: 195 GLDEEIIIL-KKNISYQQVAFGLSKDLKESGKETQLAVDQFEALLLHSKSLLKEKERELK 253 Query: 228 MNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + LLG Y L NF+P + + IG+PA+L+ RPDI E +L Sbjct: 254 ATELTLKGLLGDYQVN--LQRTTLSEVNFEPEI---VQIGVPANLLVRRPDILQAESELQ 308 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--------PGYNTHWSFGPKLYLPIFDKG 338 S A +G A++ +P++ L G N+F PG +T + G L PIF++G Sbjct: 309 ASHADVGEARAAFFPAVRLFGGAGF---NAFDFSKLFLTPG-STVYELGAGLTAPIFNRG 364 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNA---IKEVENALTSINEDKKIVTKLQHAVELHKK 395 +IK+N +A++S Q ++ +++TV NA + +V NA ++++E + T V + ++ Sbjct: 365 RIKANFEQAKASQQIAWLDYEKTVFNAYLEVLQVVNAYSTLDEQLEFKT---EEVLVLRR 421 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S+S + + G + LD+++ + + E+D K Q +S V LY ++G Sbjct: 422 SISNANTMFSVGYANYLDVINSQNRALEAELDYVSLKTQQLESIVSLYKSLGG 474 >gi|152984747|ref|YP_001347488.1| RND efflux system outer membrane lipoprotein [Pseudomonas aeruginosa PA7] gi|150959905|gb|ABR81930.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas aeruginosa PA7] Length = 497 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 214/461 (46%), Gaps = 34/461 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------KWWESFNDTSLNKLVKIALQ 70 GC+ E+ P + Q + + DT +WW + D L++LV AL+ Sbjct: 24 GCSAVTEHPVPSV-----QLPRAGAWQALAADTSAQQPPDQWWRLYQDPQLDQLVGRALR 78 Query: 71 QNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPN-LKTNSTGQLDS---- 122 N + A ++ + RA +P +S+ + R + + STG+ Sbjct: 79 HNHDLEGALAHVDELLALLGQARAQRWPGTSTSWQTFYGRTSDDQTEAKSTGERAPSQWN 138 Query: 123 -------DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 D++IDL+GQ RH I ++ A ++A A D ++NV + +Y A + R Sbjct: 139 HVPAFALDYQIDLWGQVRHSILAAQAGAEAAQAAHDQLRVNVAAGTARAYASACAYAARA 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +I + ++ +++++L+ + G + L + ++ + ++ + +P L + + + Sbjct: 199 AIQQRSVETVERSLDLTQRQRRSGLVTDLEVERVRSLLEETRALLPRLLAERQAALEELG 258 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G + + + P L + +G L++ RPDIR E++L + ++G+ Sbjct: 259 VLIGSDPQQLPAAVGE--CRRVPRLARELPVGDGWALLQRRPDIRQAERELEAASHEVGV 316 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++D YPS+S SIA + D H ++ GP + + ++ + A + Sbjct: 317 RQADFYPSVSFGASIAASSDR-LHDLGDHEAITYAIGPLISWRFPNMLSTRARLEGARAH 375 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + Q +++ L A+KEV +L + + L A++ +K+ L+ +NY+ G Sbjct: 376 ERRQLARFRQQALTALKEVRQSLARYSGESSRRQALLGALDSSRKAYRLAHLNYQAGALD 435 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD ERA ++E + + A RQL + +DL+ A+G G+ Sbjct: 436 FLDVLDSERAMVRLEAEKAEADRQLVERQIDLFHALGGGWQ 476 >gi|260592684|ref|ZP_05858142.1| multidrug resistance protein, FusA/NodT family [Prevotella veroralis F0319] gi|260535454|gb|EEX18071.1| multidrug resistance protein, FusA/NodT family [Prevotella veroralis F0319] Length = 459 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 111/417 (26%), Positives = 188/417 (45%), Gaps = 24/417 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 + L W F D L L++ AL N ++ A I+ A++ + + + PS Sbjct: 52 DFGNLPWRSVFTDPQLQALIEKALNNNPDLINAALNIDIAEQQVKTSKLAFLPSVVFAPT 111 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVIS 158 +ISH T S T + + W +DLFG+ R + + + L S +V + + N+I Sbjct: 112 GTISHFGSHTPSTQSYTLPVSASWDVDLFGKLRSQKKAAQMMLLQSKDYRVAV-QTNLIC 170 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + I + L K ++ L+ G S+ EA S+++ Sbjct: 171 NVANLYYTLLMLDRQKQIIDDMSGLTKNTWDMMKLQMEYGRARSTSVQSAEAAYYSVQTQ 230 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRP 276 + + R + +S LLG PA Q + N +P N GI L+ NR Sbjct: 231 GADIRRQIRETENALSLLLGEPA-------QGIARGSLANQSLPANFAGGIGVQLLSNRA 283 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPI 334 D+ E LA I A+S YP+L+++ + A T+ N PG S L PI Sbjct: 284 DVHANEMALAQCFYNIQQARSRFYPALNISPTGAWTNSNGMVNPG-KLLLSVVGSLTQPI 342 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F +G++K+ +R AE ++ Y TWQ ++L A EV NAL + N + Q +++ K Sbjct: 343 FMRGQLKAGLRVAEDKYKQAYNTWQNSILKAGSEVSNALVAYNSAGEKEKLQQQQIDVLK 402 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 +++ + + Y Q + L+++ +++ E+ S K Q K S V+LY A+G G Sbjct: 403 QNVEHTQMLYAQSSSTYLEVITAQQSLLNAEI--SQVKEQFTKLQSIVNLYNALGGG 457 >gi|253700473|ref|YP_003021662.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M21] gi|251775323|gb|ACT17904.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter sp. M21] Length = 474 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 110/446 (24%), Positives = 196/446 (43%), Gaps = 29/446 (6%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 GP Y + P K L I W E F D L K++ +AL N + A Sbjct: 40 TGPSYKEGESP-------KAEQKPLAEI---PWQEFFLDPQLRKVIGLALDNNRDLRVAV 89 Query: 80 ERINAAKENILSVRADLFP--SSYASISHRFIPN-LKTNSTG----QLD-----SDWKID 127 + + RADL P + A +S + +P+ L N G Q D S +++D Sbjct: 90 LNMERFRALYQIQRADLLPQVNGNAGLSVQGVPDDLSNNGRGSTVHQYDVGVGISSYELD 149 Query: 128 LFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 LFG+ R + + +L S ++ ++S++ +Y+ +R+ +A L ++ Sbjct: 150 LFGRVRSLKDQALEEYLSTEQARRSVQITLVSQVATAYLALASDLDRLKLAKDTLANQQE 209 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + LS+ +F G S L L + + + + DI +++ ++ ++G L Sbjct: 210 SYRLSNSRFQAGVASALDLQQAQTSVDAARVDIARFTTFVAQDMNALNLVVGSGVGSDL- 268 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 S N P + G+P+D++ RPDI E L + A IG A++ +P ++L Sbjct: 269 LPASLSENLTP--IKDLAPGLPSDVLLARPDILQAEYLLRGANANIGAARAAFFPRITLT 326 Query: 307 GSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 S+ D F N WSF P++ +PIF+ G+ K+N++ A+ +++ + Sbjct: 327 SSVGFGSDQLTGLFKSGNLAWSFAPRITVPIFEGGRNKANLQVAQVDRDIALAQYEKAIQ 386 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A +EV +AL + V Q ++ LS Y+ G S L++LD +R+ Sbjct: 387 TAFREVADALAQQGTIDEQVAAQQSLTGATAETFRLSQARYQTGIDSYLNVLDAQRSLYA 446 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +L A+ + V LY +G G Sbjct: 447 AQQNLITARLVRLSNQVTLYRVLGGG 472 >gi|255318815|ref|ZP_05360041.1| outer membrane protein OprM [Acinetobacter radioresistens SK82] gi|262378924|ref|ZP_06072081.1| outer membrane protein [Acinetobacter radioresistens SH164] gi|255304071|gb|EET83262.1| outer membrane protein OprM [Acinetobacter radioresistens SK82] gi|262300209|gb|EEY88121.1| outer membrane protein [Acinetobacter radioresistens SH164] Length = 490 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 100/406 (24%), Positives = 191/406 (47%), Gaps = 15/406 (3%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 F+D L ++ +AL N + AT I A++ + P+ AS S NL + Sbjct: 60 FSDERLKSVIDLALTNNRDLRTATLNIQRAQQQFQISENNQLPTIGASGSVLRQDNLNSQ 119 Query: 116 STGQLDS--------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G S +++D +G+ R + +++L + D ++++IS++ ++++ Sbjct: 120 GRGPTTSYNVGLGVTAYELDFWGRVRSLRDAALDTFLATQTARDSTQISLISQVSQAWLN 179 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +A + L ++ L+ +F G S+L + + + +++ +D+ Sbjct: 180 YSFASANLDLAERTLAAQLESYNLNRKRFDVGIDSELPVRQAQISVETARNDVANYRTQI 239 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ L+G + L ++ S N+ ++ G+P+DL+ NRPDIR E +L+ Sbjct: 240 AQARNLLNLLVGEQVPDNLLPPKRISRVTNQNV---LSTGLPSDLLVNRPDIRTAEYQLS 296 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ L+P++SL GS + F WS GP L +PIFD G ++N Sbjct: 297 AAGANIGAARARLFPTISLTGSAGYASTDLSDLFKSGAFVWSLGPSLDIPIFDWGTRRAN 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I E+ Q ++ ++ A +EV +AL V + VE S L+ Sbjct: 357 IAITETDQQIALSDYERSIQAAFREVNDALAVRKNIGDRVAAQRRLVEATNTSYRLANAR 416 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R G S L +LD +RA+ E L + ++ + V+LY ++G G Sbjct: 417 FRAGIDSYLTVLDAQRASYAAEQGLLLLEQANLNNQVELYKSLGGG 462 >gi|167034778|ref|YP_001670009.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166861266|gb|ABY99673.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 471 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 110/469 (23%), Positives = 216/469 (46%), Gaps = 32/469 (6%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMP----LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 SL + L C + P P + P + ++ T++WW +F L++ Sbjct: 7 ISLLTLCLPLCATLAACSTPPTPSSGIVAPLAWQGDAPAPSAHLPTVQWWHAFASRELDR 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFI----------- 109 LV+ AL + AT R+ A+ + A L P ++ R + Sbjct: 67 LVQHALDNAHDLAGATARVRQAQARAVMAGAPLLPEVQLGLNGSRQRLLHGDGNDQLDVS 126 Query: 110 --PNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 T+ QL + ++ID +G R +++L +LD++ +L ++S + SY+ Sbjct: 127 RSERTSTSFDAQLSASYEIDFWGGLRATRDNALRSLDASRFDRQTVELTLVSAVADSYLQ 186 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E++ IA L + + L + G+ ++L L + + + + + +P LE+ + Sbjct: 187 GLALQEQLRIARLNLRNAQDVLGLVEARQRSGSATRLELAQQRSLVATQQRQLPLLEQQW 246 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + ++TLLG P + L Q+ + Q + I G+P++L+ RPDI E +LA Sbjct: 247 QDSRVTLATLLGDP-VQSLPNSQEAIDALQ---WPAIGSGVPSELLTRRPDIAAAEARLA 302 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNI 344 + A + +A++ + P L+L ++ N+F +++++ L PIF+ G++++ Sbjct: 303 AASANVQVARAAMLPKLTLGANLG-AGSNTFAHLLDSSYYTLTSGLVAPIFNNGRLRAAR 361 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 AE+ E T++ ++L +VE AL +I + V+ + + L+ Y Sbjct: 362 ELAEAEQAELLETYRSSILAGFADVEKALNAIQGVDRQRQWQDEEVQQARLAFDLAQQRY 421 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 G +LL +L+ +R T V D A+ +LA+ V LY A+G G+ Sbjct: 422 GAGAETLLSVLETQR-TLYVAQD-QQARLRLARLLGSVALYKALGGGWQ 468 >gi|313109656|ref|ZP_07795600.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|310882102|gb|EFQ40696.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 487 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 111/469 (23%), Positives = 209/469 (44%), Gaps = 30/469 (6%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 N+ R +L + LA C+VGP+Y +P P P + + S++L + WW F Sbjct: 7 NLSRLALALAVGTGLAACSVGPDYQRPQSP--PPRVA---SEHLGEFSGERREAPWWSFF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPN---- 111 +D L +LV AL +N I +A + +A+ D P + + R I Sbjct: 62 DDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQLPQVTSQAGYNRSIEQQLDY 121 Query: 112 -------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L + D+ W+IDLFG+ R +++LA ++A A + + +L++ + + Sbjct: 122 DGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARAEAADADLRLVRLSIAADTARA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + ++ R+ +A + ++ +EL+ G+ + +A + E+ IP L Sbjct: 182 YFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSGLPEDVENAQANLLRSEAAIPPLT 241 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + L G P + + NL +G LI RPD+ E Sbjct: 242 TALESARYRLDVLRGEAPGSGAPILDGSGAAPLAKNL----PLGDVDRLILQRPDVVSAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++LA S +G A ++LYP L L G I + + P + P F G + Sbjct: 298 RQLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDLGSASRAFELAPSVSWPAFRLGNV 357 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E+ + +Q ++L A ++V NAL + E ++ + L + ++ ++ Sbjct: 358 RARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQLAEHQRRLVALFQSATHGANALEIA 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G S L +L+ +RA ++ +L+ A+ + + LY A+G G Sbjct: 418 NERYRAGAGSYLAVLENQRALYQIREELAQAETASFVNVIALYKALGWG 466 >gi|217423978|ref|ZP_03455478.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|217393041|gb|EEC33063.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 541 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVGRTVGAQKAGETAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|157376344|ref|YP_001474944.1| putative outer membrane protein [Shewanella sediminis HAW-EB3] gi|157318718|gb|ABV37816.1| putative outer membrane protein [Shewanella sediminis HAW-EB3] Length = 494 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 113/495 (22%), Positives = 211/495 (42%), Gaps = 54/495 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF-----------SIGNSKNLINIDT 49 MN + + ++LAGC+VGP+Y KP L + +G+++++ + Sbjct: 1 MNFYQVAPVVVAMILAGCSVGPDYQKPETNLDSNLYQAYLYQNTPGTEVGDTQSIKH--- 57 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF- 108 WW FND LN+LV A Q++ + A +RI A+ ++ + P+ +I F Sbjct: 58 -AWWTQFNDPILNQLVIDAQNQSIPLKIAAQRIRMAQSYQSAIESFKVPT--VNIGAGFG 114 Query: 109 -----------------IPNLKTNSTGQLDSD-----------WKIDLFGQ-RRHIESSL 139 I + G +D + W++DLFG+ R + ++ Sbjct: 115 NYQLSKNDPLIGSAITAINPISGEELGLVDDNNSAFFAGATIAWEVDLFGRIDRQVNAAA 174 Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 + + + S +I +Y+ R +ER IA Q + ++ +EL L G Sbjct: 175 IRKEQLVIMREGLTTLITSDVIHNYLQMRGAQERKQIALQTAEDQRRTLELVRLMVKSGF 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPN 258 S L + +A + + +S +P LE + + ++ LLG P + Q P+ Sbjct: 235 GSDLDEARAKAMLAATQSMVPQLEIAENAHKQRLAILLGETPLQSHRRFTQVMP---LPS 291 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDN 315 I G+P++L+ RPDIR E+++A + A + YP + L G+ +A D+ Sbjct: 292 FDGVIPTGLPSELLNRRPDIRIAEREMAAVSEERAAAIAAQYPKVFLTGAPGVLAKDFDD 351 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F + W+ + +FD G+ + + ++ + ++++V A EVE L Sbjct: 352 LFSSDSIAWAASAGISWNVFDGGRGDAMVDMQQARFDASVLGYKQSVNAAFGEVETLLQG 411 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 ++ V + A ++ + YR G L ILD +R ++ + AK Q Sbjct: 412 YGHSQQYVQLVSEAEAATNCAVDKAKSLYRAGLSDYLSILDAQRQQNMMKDRVVAAKLQT 471 Query: 436 AKSYVDLYIAIGSGY 450 A + L+ A+G + Sbjct: 472 AHMTIGLHKALGGNW 486 >gi|162149186|ref|YP_001603647.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] gi|209545071|ref|YP_002277300.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161787763|emb|CAP57359.1| Outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532748|gb|ACI52685.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 534 Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 101/466 (21%), Positives = 201/466 (43%), Gaps = 35/466 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKI 67 +V L GC + P Y P P + D WW FND LN L Sbjct: 27 VVFLGGCDLAPTY-HPVKLAYPDNWEGSGVFRFGRPDEAAPRKDWWTVFNDPQLNALEDQ 85 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQ 119 + N + E A++ + R+ LFP S +HR + + Sbjct: 86 VARLNPDLQAEAEAFMQARDIAMQARSQLFPQISGGAGGEKEKSSAHRLWRAEGSTTPLY 145 Query: 120 LDSD-------WKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + S+ W+ D + + R + + L + YA +A+L++ S++ YI R Sbjct: 146 MSSEQYYGSATWEPDFWSSIRNKTRMAKEATQQLAADYA---LARLSIQSEVASDYIALR 202 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 F + ++ + Y++ + ++ L+ + + + + + + + ++ + + + Sbjct: 203 GFDAQDAVYRDSIAYYQQAVSITQLRLAGAISPGMDVARAQTQFYATQARETDVRAARDV 262 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+ F H S F P + + + +P++L++ RPDI E+ +A + Sbjct: 263 LEHAIAVLVNKAPASF-HIAPVDSYPFAP---VQLPVVLPSELLQRRPDIASAERSMAQA 318 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IG++++ YP ++ N D+ F N+ + FG + LPIF G ++ ++ Sbjct: 319 NRAIGVSRAAFYPHVTFNAMTGFM-DHGFDLASLSNSMYQFGAQAVLPIFTAGLRRAELQ 377 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 R S ++ ++ TVL A +EVE+ LT + + T+ AV ++ +SM Y Sbjct: 378 RTWSQYRQSEDKYRSTVLGAFREVEDNLTLTSRLRTETTQASEAVNAALRTQRMSMALYT 437 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD++ ++A + + L + + + + V L A G G++ Sbjct: 438 GGLTNYLDVVVAQQAALEARIILVQVQARQSDAEVQLVRAYGGGWS 483 >gi|296387241|ref|ZP_06876740.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] Length = 487 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 110/468 (23%), Positives = 208/468 (44%), Gaps = 28/468 (5%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESF 56 N+ R +L + LA C+VGP+Y +P P P + + S++L + WW F Sbjct: 7 NLSRLALALAVGTGLAACSVGPDYQRPQSP--PPRVA---SEHLGEFSGERREAPWWSFF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPN---- 111 +D L +LV AL +N I +A + +A+ D P + + R I Sbjct: 62 DDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQLPQVTSQAGYNRSIEQQLDY 121 Query: 112 -------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L + D+ W+IDLFG+ R +++LA ++A A + + +L++ + + Sbjct: 122 DGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARAEAADADLRLVRLSIAADTARA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + ++ R+ +A + ++ +EL+ G+ + +A + E+ IP L Sbjct: 182 YFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSGLPEDVENAQANLLRSEAAIPPLT 241 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + + L G + P L + +G LI RPD+ E+ Sbjct: 242 TALESARYRLDVLRGEAPGSGAPILD--GGGAAP-LAKNLPLGDVDRLILQRPDVVSAER 298 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 +LA S +G A ++LYP L L G I + + P + P F G ++ Sbjct: 299 QLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDLGSASRAFELAPSVSWPAFRLGNVR 358 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R E+ + +Q ++L A ++V NAL + E ++ + L + ++ ++ Sbjct: 359 ARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQLAEHQRRLVALFQSATHGANALEIAN 418 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G S L +L+ +RA ++ +L+ A+ + + LY A+G G Sbjct: 419 ERYRAGAGSYLAVLENQRALYQIREELAQAETASFVNVIALYKALGWG 466 >gi|255038385|ref|YP_003089006.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254951141|gb|ACT95841.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 481 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 109/482 (22%), Positives = 218/482 (45%), Gaps = 51/482 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F ++ ++GC + + P F+ + + +L+W FND L L+ Sbjct: 12 LFPAILITVSGCKLTQPVEQRAQIKTPETFA--GQADSTGVASLQWKTFFNDQHLVALID 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNS 116 ALQ NL + A +RI A+ NI+ + PS +S +F + N TN Sbjct: 70 TALQNNLDLKMAVQRIEMARTNIMIAHGAMLPSVTGDVSGGGRKFGDYTMDGVGNYDTNF 129 Query: 117 TGQLDSD------------------WKIDLFGQRRHIESS-----LANLDSAYAQVDIAK 153 + LD D W+ID++G+ ++ + + LA+ A V Sbjct: 130 SSNLDDDRRLPAPFLPDYFLGLRSSWEIDIWGKLKNQKKAAYTRFLASEKGRQAIVT--- 186 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +I+++ SY + + I + +DL + +E ++ G ++L + +L A++ Sbjct: 187 -GLIAEIARSYYELLALDTELDIIQKNIDLQESAVETIKIQKEAGRANELGVQQLTAQLL 245 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 + S LE R V I + A F + + S Q +P I+ G+PA + Sbjct: 246 NTRS----LEYEVRQQVVEIENNVNLLAGRFPQPVTRSSAMGQA---VPQSISAGVPAQM 298 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP 328 +R RPDI+ + +L + ++ A+ L PSL++ + S F + +S Sbjct: 299 LRRRPDIQQAQLELLANYSEQQAAQLALLPSLNITAFLGFNAFKSNLLFSSGSLAYSALG 358 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+ ++ +K+ +RAE+++ E + ++VL EV +L + ++I + Sbjct: 359 GLTAPLINRKALKAGQKRAEAASLEALYAYNKSVLTGFSEVSTSLKKLENTREIGELKRQ 418 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 VE+ +++++ S + G S L+++ +R + E++L+ +++ + V+LY A+G Sbjct: 419 EVEVLQQAVATSQDLFLTGYASYLEVITAQRGVLQEELNLTNVQKEQFLALVELYRALGG 478 Query: 449 GY 450 G+ Sbjct: 479 GW 480 >gi|154245007|ref|YP_001415965.1| RND efflux system outer membrane lipoprotein [Xanthobacter autotrophicus Py2] gi|154159092|gb|ABS66308.1| RND efflux system, outer membrane lipoprotein, NodT family [Xanthobacter autotrophicus Py2] Length = 511 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 104/478 (21%), Positives = 210/478 (43%), Gaps = 42/478 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---------------LKW 52 F+ ++L+ GC VGP++ P P + G + + D +W Sbjct: 19 FAASLLLMNGCMVGPDFEAPDAPRVSGYLPEGTPRPTTSADVHGGSRQVFLRGRDLPGEW 78 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPN 111 W F + ++ V A++ + + A + AA+EN L+ LFP AS S R + + Sbjct: 79 WRVFRNKQIDAFVAEAIRNHPDVTAAQAALRAARENALAGEGALFPQVSASGSATRQVAS 138 Query: 112 LKTNS-----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 L + + + +D++G RR +E+ A D Q++ L++ + Sbjct: 139 LASQGESGNTSPYNLYNASVSVSYVLDVWGGTRRQVEALEAQADYQRFQLEATYLSLTAN 198 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + I + +I + I+ ++ ++L +F GA ++ ++ ++ + ++ + Sbjct: 199 VVTAAITDASLRAQIEATNDIIKSEQEQLKLVQRQFELGAVAQSDVLSQQSNLAQTQATL 258 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 P L+K + + LG P+ + ++ S L +P + + +P+ L+R RP Sbjct: 259 PPLQKQLAQQRNQLMAYLGRLPSQDRGEHVTLAS------LTLPRDLPVSVPSALVRQRP 312 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLP 333 DI E L + A +G+ +++ P + L GS LT D+ F WS + Sbjct: 313 DIGAVEASLHKATATVGVNVANMLPQVQLTGSYGRAGLTPDSLFSPGTAAWSIAGSVAQT 372 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE-L 392 +FD G + + A +S ++ ++ TV+ A ++V ++L +I D + K Q A E Sbjct: 373 VFDGGTLYHDKESAVASNEQALAQYKSTVITAFRDVADSLRAIEADASTL-KAQLAYEKA 431 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S+ +S Y G + +L E+ + V A+ L+ A+G G+ Sbjct: 432 AQESVKISRTQYLAGAVTYPSVLTAEQNFQQAVVARVKAQAARFTDTAALFQALGGGW 489 >gi|148254198|ref|YP_001238783.1| putative outer membrane efflux protein [Bradyrhizobium sp. BTAi1] gi|146406371|gb|ABQ34877.1| putative outer membrane efflux protein [Bradyrhizobium sp. BTAi1] Length = 520 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 110/475 (23%), Positives = 214/475 (45%), Gaps = 47/475 (9%) Query: 13 VLLAGCTVGPEYTKPHMP----------LLPTQFSI---GNSKNLINIDTL--KWWESFN 57 VLLA C VGP++ P P L PT + GN+++ L WW F+ Sbjct: 26 VLLASCAVGPDFMPPDAPPATGYTSERRLAPTGSAATPGGNAQSFAAGSDLPGTWWALFH 85 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 +N V+ A++ + I A + AA+EN LS + LFP AS S T + Sbjct: 86 SRQINAFVEEAIRNHPDIEAAQYALRAARENALSQQGSLFPQVSASGSAERT-QASTTQS 144 Query: 118 GQ--------------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 GQ + + +DL+G RR +E+ A D +++ L++ + ++ Sbjct: 145 GQWPGQTSLYTLYGASVSVSYALDLWGGTRRQVEALQAQADYQAFRMEATYLSLTANVVT 204 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + I +++I+ +I+ +E +F GA SK ++ EA + ++ + L Sbjct: 205 AAITDASLRDQIAATEEIIKAETDQLERIQRQFDVGAISKSDVLSQEATLAQAKATLAPL 264 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRY 280 +K + + LG L + + + L +P + + +P+ L+R RPDIR Sbjct: 265 QKQLAQQRNQLMAYLGR-----LPHQDRGEHVSLAELRLPRKLPVSLPSSLVRQRPDIRQ 319 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGK 339 E L + A +G+ ++L P ++L+GS + + F W + + D G Sbjct: 320 AEATLHQATATVGVGIANLLPQVTLSGSYGASGPERLFSPTTLVWEAAASVSQKLIDGGA 379 Query: 340 IKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + + A+ + EQ ++ ++ TV+ A + V ++L +I D + + A + S++ Sbjct: 380 LY-HTKEADVATFEQDLSLYKSTVITAFQNVADSLRAIQYDAEALKAQAAAEKATADSLN 438 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 +++ ++ G ++++ +++ V S K Q A + D L+ A+G G+ Sbjct: 439 MAIEQFKSGAVPYANVINAQQSYLNARV--SRIKSQ-ATRFTDTAALFQALGGGW 490 >gi|325916335|ref|ZP_08178612.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325537443|gb|EGD09162.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 310 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 142/293 (48%), Gaps = 8/293 (2%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + R+ +A + + + + + L +G ++L L + + + ++ +P LE Sbjct: 11 YISVRGLQARLDVAQRQVAAQQGLVAMVTLLHGKGLAAELQLQQAQGALSQAQATVPGLE 70 Query: 224 KSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + +LG P T + P + + G PA+L+R RPD+ E Sbjct: 71 AGLVAAMDALDVMLGVAPGTHRAELAASKPIPLAPQIA---DSGSPAELLRRRPDLIAAE 127 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 +LA S A+IG+A ++ YP SL+G + AL+ N F G S L +FD G Sbjct: 128 CRLAASNARIGVAMAEYYPKFSLSGLLGSATALSGGNLFTGGAAQSSGVLGLRWRLFDFG 187 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +I + I +A+ EQ ++ VL A ++VENA T++ + ++ L V+ K+ Sbjct: 188 RINAQIAQAKGQEAEQLAAYRLAVLRATEDVENAFTALVKREQQAAVLTQGVDALGKARG 247 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + Y +G SL+++L+ + + + A+ + A+S V + A+G G+ Sbjct: 248 ASALAYEKGTVSLIEVLNADDSLLRASNAQVQARTEAARSAVATFRALGGGWQ 300 >gi|162149602|ref|YP_001604063.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] gi|161788179|emb|CAP57784.1| putative outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] Length = 494 Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 119/481 (24%), Positives = 200/481 (41%), Gaps = 39/481 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPH--MPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNK 63 + L V L GCTVGP + P MP S G L+ WW F D L+ Sbjct: 11 VAGLAWVWLGGCTVGPAFHAPRADMPAAWHDVSAHGGGVALVARPDPLWWRMFRDPVLDA 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF-------IPNLK 113 LV A+ N + R+ A+E + RA P AS + R + Sbjct: 71 LVARAMAGNPGFEENAARVVQAREQEATQRAAGLPELGASARYTRERLGEAGLFSVLGGA 130 Query: 114 TNSTGQ--------------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 + TGQ D+ W++DLFG+ RR +E + A + + A+ A Sbjct: 131 GSGTGQPAFLGGIGGLTQGTDLYQVGFDASWELDLFGRVRRSVEQAHAQVAAQVARQGDA 190 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L + ++ +Y+ R + + +A ++ + + L + G + A + Sbjct: 191 RLTLQGDVVRAYLQWRAAQALLDLAGEVAAARARAVALRAFQRRLGLADGTDVDLARAAL 250 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ ++ ++ L G P + P +P+ + A L Sbjct: 251 VRAQGQAAGFQRQAGQALNRLAILTGQPPGALDGPLAAVRPLPDPPPRVPVVL--SAALA 308 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPK 329 R RPDIR E L + A IG A + LYP ++L+G + LT + NT + FGP Sbjct: 309 RLRPDIRAAEADLHAATAGIGAAVAQLYPDITLSGQVGQRTLTLGSLADWGNTFYQFGPA 368 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LP+F G++++ IR A + QE + +++ VL+A+ EVE+AL ++ D + A Sbjct: 369 ISLPLFQGGRLRAAIRLARARQQEAALAYRQRVLDALGEVEDALVALRTDGAARESDRAA 428 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++L+ YR G L +LD D A+ + V L A G G Sbjct: 429 MASVTDRLALARTRYRDGTGDALAVLDARAELGGAGQDDIQARLAVLLDVVALCKATGGG 488 Query: 450 Y 450 + Sbjct: 489 W 489 >gi|209520348|ref|ZP_03269113.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209499222|gb|EDZ99312.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 506 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 111/473 (23%), Positives = 210/473 (44%), Gaps = 43/473 (9%) Query: 3 ILRAIF--SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESF 56 +LR + +L L+ C P Y +P P T +S + +T++ WW+ F Sbjct: 40 VLRGVCAATLCAATLSACVDVSMPAYQRPDTPA-KTSWSDRKGAPVSAAETIERDWWKGF 98 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 D LN L+ A+ N I RI A I A P+ + T S Sbjct: 99 QDPYLNTLIDKAIDGNFDIRVLAARIEVAHTQISETGAAALPTVDLGAGADY-----TKS 153 Query: 117 TGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 TGQ L W ID++G+ + +++ A ++ A L +++ + +Y Sbjct: 154 TGQPLSKTYNLALQVTWDIDIWGKVEKGVQAQKAEFHASEADWRAGYLELVANVASTYFQ 213 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 F ++I + + ++ + + + G + +++ +AEI + D+ + +S Sbjct: 214 ILQFDDQIEQQQKTIATNRQILTIFEGQARNGLVPQTQVLRQQAEINRLTHDLYEIRRSR 273 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 + + + TLLG PA EF Q + Q + +P + G+PA L+ RPD+ E ++ Sbjct: 274 AVADNALCTLLGVPAGEF----QVPPGHLQERVQLPGVPDGLPAQLLSRRPDVVAAEFRV 329 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSN 343 ++ +G +K PS+ L T + ++FG P + +P+FD G ++++ Sbjct: 330 LEAYDLVGQSKLAQLPSIGLTAQGG-TASYALNQLLKSFTFGLMPSINIPLFDPG-VRAH 387 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 ++ E+ ++ ++ V+ A +EVENAL +++ K QHA EL ++ L ++ Sbjct: 388 VKVTEAQSKVAEQQYRVAVMGAFEEVENALVNLSAHKA-----QHA-ELQQQVARLQIVA 441 Query: 403 -----NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R G S L++ + ER + + L + + V LY A+G G+ Sbjct: 442 DQLQSQLRLGVVSQLEVFEDERTLLEAQQALLENHQLILSDTVTLYKALGGGW 494 >gi|260550402|ref|ZP_05824613.1| outer membrane protein [Acinetobacter sp. RUH2624] gi|260406508|gb|EEW99989.1| outer membrane protein [Acinetobacter sp. RUH2624] Length = 465 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 105/459 (22%), Positives = 219/459 (47%), Gaps = 25/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + S + L C V + +P + +P FS S I + K E ++ L +++ Sbjct: 12 VISTLSIALVAC-VNMQAPQPAITSHIPHNFSQNTSGKTIAEQSYK--EFISNPKLAQVI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN---STGQL 120 +I L N + AT I ++ + P+ + + P++ N ST Q+ Sbjct: 69 EITLNNNRDLRTATFNIERVQQEYQITKNSQLPTIGVMGGAARQVDPSINPNNPASTFQV 128 Query: 121 D---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + +++D +G+ +++ +++L N + + + ++++IS + ++++ + +++ Sbjct: 129 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQISLISNVTQAWLNYAFAQANLNL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L + L+ +F G S++ L + + +++ +D+ T + + + + L Sbjct: 189 AEQTLKTQLDSYHLNKKRFEVGIDSEVPLKQAQISVETARNDVATYKTQIQQAKNLLDLL 248 Query: 237 LGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G+P + L H +Q + F+ G+P+DL+ +RPD++ E +L + A IG Sbjct: 249 AGHPVPQNLLPDHTIQNIT--FEKTFAA----GLPSDLLNHRPDLKAAEYELRAAGANIG 302 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ ++P++SL GS + F N WS GP + LPIFD G K+NI+ AE+ Sbjct: 303 AAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPSVDLPIFDWGTRKANIKIAETD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A +EV +AL + + + + V + LSM YR G S Sbjct: 363 QKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATDATYKLSMARYRAGVDS 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + +++Y A+G G Sbjct: 423 YFTVLDAQRSAYAAQQGLLALEQMKFNNQIEIYKALGGG 461 >gi|284066974|gb|ADB77769.1| AdeC [Acinetobacter genomosp. 13] Length = 465 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 105/459 (22%), Positives = 219/459 (47%), Gaps = 25/459 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + S + L C V + +P + +P FS S I + K E ++ L +++ Sbjct: 12 VISTLSIALVAC-VNMQAPQPAITSHIPHNFSQNTSGKTIAEQSYK--EFISNPKLAQVI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTN---STGQL 120 +I L N + AT I ++ + P+ + + P++ N ST Q+ Sbjct: 69 EITLNNNRDLRTATFNIERVQQEYQITKNSQLPTIGVMGGAARQVDPSINPNNPASTFQV 128 Query: 121 D---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + +++D +G+ +++ +++L N + + + ++++IS + ++++ + +++ Sbjct: 129 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQISLISNVTQAWLNYAFAQANLNL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L + L+ +F G S++ L + + +++ +D+ T + + + + L Sbjct: 189 AEQTLKTQLDSYHLNKKRFEVGIDSEVPLKQAQISVETARNDVATYKTQIQQAKNLLDLL 248 Query: 237 LGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G+P + L H +Q + F+ G+P+DL+ +RPD++ E +L + A IG Sbjct: 249 AGHPVPQNLLPDHTIQNIT--FEKTFAA----GLPSDLLNHRPDLKAAEYELRAAGANIG 302 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK+ ++P++SL GS + F N WS GP + LPIFD G K+NI+ AE+ Sbjct: 303 AAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPSVDLPIFDWGTRKANIKIAETD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A +EV +AL + + + + V + LSM YR G S Sbjct: 363 QKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATDATYKLSMARYRAGVDS 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + +++Y A+G G Sbjct: 423 YFTVLDAQRSAYAAQQGLLALEQMKFNNQIEIYKALGGG 461 >gi|148556133|ref|YP_001263715.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148501323|gb|ABQ69577.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 487 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 113/470 (24%), Positives = 206/470 (43%), Gaps = 36/470 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLN 62 + L LL+GC P+ +P + Q + + L L WW F D L+ Sbjct: 13 LAGLVATLLSGCAAVPQ-VRPQV-----QAASAATAGLDGGAALAPVGDWWHGFGDPQLD 66 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF-----IPNLKT 114 +++ AL N ++ A R+ A+ I + +A L P ++I R IP Sbjct: 67 RIMAEALAGNPSLDVAMARLARAQAGIAANKAGLLPQVGVDASAIRQRLSEKYIIPPPYG 126 Query: 115 NST-----GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 S Q DW +DL G Q+ + + A+ D+A V+ A++ + + SY+D Sbjct: 127 GSNRWIGDAQAKLDWSLDLAGRQKALVAQAGASADAAALDVEAARVTLSGAVAQSYVDLA 186 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+ IA + + ++ + L+ + S L E + E + ++ Sbjct: 187 RATEQARIARRFVASREEQLRLAGTRKRTDLGSDFDLRAAETLLAEARQAGIRAEGARQL 246 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 VH ++ L ++ + + +P+ +PADL+ RPDI ++ + Sbjct: 247 MVHALAALA---GRGADYHAAIADPTIRLDAALPVPDALPADLLGRRPDILAARARIEAA 303 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +A++D YP + L G I L F G + GP L+LPIF+ G++K+N + Sbjct: 304 EAGRKVARADFYPDIDLKGFIGLQAIGLGALFTGGAATYGAGPALHLPIFEGGRLKANYK 363 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + E ++ V+ A++E +AL++I + + V +++ L + R Sbjct: 364 GAVAGIDEAVASYNGAVVGAVRETADALSAIATNAADAAEQHKVVAGLGETVRLDEVRLR 423 Query: 406 QGRYSLLDILDI-ER--ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G + LD+LD +R A + EVDL+ A + + L +A+G ++P Sbjct: 424 TGLGARLDVLDAGDRLLAANQREVDLAA---DGAAARIRLLVAVGGSFDP 470 >gi|121596305|ref|YP_988201.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120608385|gb|ABM44125.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 483 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 106/424 (25%), Positives = 187/424 (44%), Gaps = 31/424 (7%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASIS 105 D WW+ +D L L+ A + T+ +A R+ A+ + RA L PS + AS S Sbjct: 50 DLADWWQRHSDPLLGALIVDAQALSPTVAEAGARLAQARAQQTAARAALLPSLDAQASAS 109 Query: 106 HRF---IPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 F + + T + L + W+IDLFG+ + +++ L A AQ A+++V ++ Sbjct: 110 RGFNEQVRGVATTAQAGLQAGWEIDLFGRNAAVADAARERLAGAQAQWHEARVSVAAETA 169 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG----------ATSKLSLVKLEAE 211 Y + H ++ +A + L+ G A+ S V+ E + Sbjct: 170 LQYSNWHHCARQLQVAQADARSRGETARLTRESERAGFTPATAALATASQADSAVRAEQQ 229 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 E + TL + + T L A LH P IN G+PA Sbjct: 230 RLQCEVIVKTLVALTGRDEPLLRTQLA--AAPPLH---------PPERLFSIN-GLPAQT 277 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTHWSFGP- 328 + RPD+ E+++A + A++G A++ YP L+L+G+I L + WS GP Sbjct: 278 LAQRPDVYAAEREVAAASAEVGDAQAQRYPRLTLSGTIGRGLVRAAGVQATSNTWSIGPL 337 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LP+FD G+ + + A + ++ V A+ EVE AL ++ + T + Sbjct: 338 AVTLPLFDGGRRAAQVDAARARYDSAAQAYRAQVRQAVSEVEQALARLDSTARRSTDARR 397 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A E +++S + +R G SL+++ D R + + +++ ++V LY A G Sbjct: 398 AAEDYRRSFIATQERWRAGLASLVELEDARRTALASDTAVVALEQERMAAWVALYRAAGG 457 Query: 449 GYNP 452 G+ P Sbjct: 458 GWTP 461 >gi|188991227|ref|YP_001903237.1| outer membrane protein precursor [Xanthomonas campestris pv. campestris str. B100] gi|167732987|emb|CAP51183.1| outer membrane protein precursor [Xanthomonas campestris pv. campestris] Length = 492 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 120/483 (24%), Positives = 214/483 (44%), Gaps = 58/483 (12%) Query: 16 AGCTVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC +GP YTKP P + PT + + WWE +D L +LV A Sbjct: 13 GGCMLGPNYTKP--PAVAETAVQAPTLHRASAADVVAAAPLNHWWEDLHDAQLTQLVTQA 70 Query: 69 LQQ--NLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---------------- 110 L NL QA R N A N RA+ P AS + + Sbjct: 71 LADSPNLRAAQARLRANRALAN--QRRAERLPKLNASALYAYAEPPQTIVDTLGGLQNGQ 128 Query: 111 ------------NLKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 NL+ T D+ W++DLFG+RR E +LA ++ A++ A++ Sbjct: 129 QGQPPAQGSQALNLEKTELYTAGFDASWELDLFGRRRRAAEGALAQAQASEAELADAQVQ 188 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ Y++ R + R++IA LD ++++ L + QGA S L + ++ +++ Sbjct: 189 LAAEVGQVYLNYRGLQARLAIADSNLDKIRQSLALVQQRRGQGAASDLQVEQIATQVQQQ 248 Query: 216 ESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLI 272 ++ L+ + + ++ ++G P + Q QP +P + + LI Sbjct: 249 QAQRLPLQMQQQEALDQLALMVGREPGA-----LDAQLAAPQPLPMLPTQVRVDDAGALI 303 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGP 328 R RPD+R E++LA S A+IG A + +P +SL G ++ S +N T + P Sbjct: 304 RRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALTKLAV-P 361 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L IFD G+ ++ + +A + + ++ VL A+++ AL+ ++ + + Sbjct: 362 MLRWSIFDFGRTRAQVEQARAGNAGREAAYEGAVLAALQDANTALSRFGSARQQLVVARQ 421 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A +S L G S +D+LD++R + + A+ QL YV L ++G Sbjct: 422 AEASATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVYYVALQKSLGL 481 Query: 449 GYN 451 G++ Sbjct: 482 GWS 484 >gi|256839804|ref|ZP_05545313.1| multidrug efflux pump channel protein [Parabacteroides sp. D13] gi|256738734|gb|EEU52059.1| multidrug efflux pump channel protein [Parabacteroides sp. D13] Length = 461 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 107/433 (24%), Positives = 201/433 (46%), Gaps = 44/433 (10%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 52 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEAALMTSRLS 102 Query: 96 LFPS----------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ----RRHIESSLAN 141 PS S+ + N+ +++ W+ID+FG+ +R +++L+ Sbjct: 103 YLPSLSLDPQGTTSSFDKAKASWTYNVPVSAS------WEIDIFGRLTNAKRQAKAALSQ 156 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + + +++ + G T+ Sbjct: 157 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQYEITTETAVKWLESLRTTQALMAAGMTT 213 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY 260 + ++ + EA SIE+ + L ++ R + ++ LLG P ++ QS P+L Sbjct: 214 EAAVSQTEATCYSIETSVKDLGQTIRETENTLAVLLGEIPQDIERGRLEDQS--LTPDL- 270 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF-- 317 IGIP ++ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 271 ---AIGIPVQMLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIV 327 Query: 318 -PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 328 NPGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQA 386 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 K + H +E + ++ + + G + L++L ++ ++ + Sbjct: 387 QTAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDEL 446 Query: 437 KSYVDLYIAIGSG 449 ++ V+LY A+G G Sbjct: 447 QATVNLYQALGGG 459 >gi|227538209|ref|ZP_03968258.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingobacterium spiritivorum ATCC 33300] gi|227241978|gb|EEI91993.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingobacterium spiritivorum ATCC 33300] Length = 490 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 107/479 (22%), Positives = 217/479 (45%), Gaps = 53/479 (11%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++ C +G +YT+P + L P Q+ ++ + I + W E F+D++L L+ AL Sbjct: 21 VVQSCKIGEKYTRPDLNL-PEQYRSDTLDYFGDTTTISRIPWREFFHDSTLLALIDSALI 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHR----------FIPNLKTNSTGQL 120 N + A A ++ +A+ PS A++++ P+ + Q Sbjct: 80 NNFDMKTALINTRIANRQMIQNKANYLPSVEATLANANRQWRSSDFGSGPSSRWYDKKQK 139 Query: 121 DS-----------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 D+ W++D++G+ + LA Y + + N+IS + Sbjct: 140 DAPDDMFVYLSQFGTEVRFSWELDIWGKISSQQDQLLAQYLDTYEAKNAIQTNLISSIAK 199 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + ++I +A + + L + + L++ G + L++ + E++ S +P L Sbjct: 200 GYFNLLMLDDKIRVAKRNVQLNDSTLRMIRLQYEAGEITALAIQQTESQRLVAASLVPEL 259 Query: 223 EKSFRMNVHNISTLLGY------PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 EK + + + TL G F H + + I++G P +++RNRP Sbjct: 260 EKEIAVQENALRTLTGQMPDRIQRGQSFEHLIAENQE---------ISLGSPLEIVRNRP 310 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSF--PGYNTHWSFGPKLY 331 DIR E +L + A + ++ YP+LS+ GS+ + N F PG G L Sbjct: 311 DIRSAEFQLISANAHTNVQQAMRYPALSIGGSLGVNSMLPKNWFNIPGALLGGISG-DLT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF +K+N A+ ++ + Q+TV+ A+ EV N++ ++ + ++ + + V Sbjct: 370 APIFKNRTLKTNYEVAKLEREKAELVLQQTVVEAVSEVSNSIITVEKQREQLEFAKKRVS 429 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ + + +R G + L+++ + E+DL +++ +SYVDLY ++G G+ Sbjct: 430 NSELAVRNAGLLFRSGYATYLEVITAQSNALTSELDLVELRQKHLESYVDLYRSLGGGW 488 >gi|325918827|ref|ZP_08180910.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325534973|gb|EGD06886.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 269 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 25/262 (9%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWES 55 M LR + +L + L AGC VGP Y +P MPL P ++ + + + WW Sbjct: 1 MPSLRTLAALTVASLAAGCAVGPNYARPDMPL-PDRYLGQADVAARQATTQAELTTWWAG 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKT 114 FND L++ V AL QNL + QAT R+ A+ + + A L PS S S R +L+T Sbjct: 60 FNDPDLSRYVTAALAQNLDLAQATARVTQARAGLTAATAALLPSGTISGSATRAYQSLET 119 Query: 115 ------NSTGQLD-----------SDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 +ST LD + W++DLFG QRR E++ A+LD+ A + ++ V Sbjct: 120 PLGQVLDSTPNLDRYASVYEANLGASWELDLFGRQRRASEAARADLDAEQANLQDVQVTV 179 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y + R ++++ ++ + L + +L+ ++ GA S+L + A +K+IE Sbjct: 180 AAEVARNYFELRGTQKQLDVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIE 239 Query: 217 SDIPTLEKSFRMNVHNISTLLG 238 +DIP LE + H ++ LLG Sbjct: 240 ADIPLLETAEAQYRHRLAVLLG 261 >gi|299532278|ref|ZP_07045671.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298719686|gb|EFI60650.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 480 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 106/427 (24%), Positives = 193/427 (45%), Gaps = 34/427 (7%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N ++ W + + D +L +L++ AL N A R+ A+ A P+ S Sbjct: 50 NTASITWQDFYLDQNLQELIRAALAHNQDQRLALLRVQEAQAAYDIQSAARLPTIGLGSS 109 Query: 106 H---RFIPNLKTNSTGQLDSD---------WKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 H R +L + + D W++DL+G+ + + E++L N Y +D Sbjct: 110 HGRARVPADLNASGRSVVAGDQQVFVGLNSWELDLWGRVKSLSEAALGN----YLALDAT 165 Query: 153 KLNVISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + V S L+ +Y+ R ER+++ + + ++++ + + G+TS+ +L ++ Sbjct: 166 QHAVQSSLVKQVALNYLALRSLDERLALTQRTIASREESLRIFKRRTEVGSTSRYALTQV 225 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + + ++ L + + + + L G A QS++ L PI G+P Sbjct: 226 QTLVHQAKAIGTQLAQQRALQANALQQLTGMDADRL-----PQSSSTAVILK-PIPEGLP 279 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 +DL+ RPDI E L + A + A++ P ++L GS D F + W Sbjct: 280 SDLLTQRPDIIAAEYGLQAAKANVSAARAAFLPRIALTGSWGTASAELDGLFRSGSRAWQ 339 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS--INEDKKIV 383 F P + LPIFD G+ ++N+ + +++ + A++EV +AL+S + E + +V Sbjct: 340 FAPTISLPIFDGGQRQANLNLQAVRQNMAVVQYEKAIETAMREVLDALSSRTMLEQQLVV 399 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 Q A K+ L+ + Y QG LD+LD ER E L + L + V LY Sbjct: 400 LTDQRAA--LKERARLARLRYDQGASPYLDVLDAERDLLSAEQQLVQGREALLSTQVALY 457 Query: 444 IAIGSGY 450 A+G GY Sbjct: 458 AALGGGY 464 >gi|194290270|ref|YP_002006177.1| outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] gi|193224105|emb|CAQ70114.1| putative Outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] Length = 487 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 104/452 (23%), Positives = 197/452 (43%), Gaps = 29/452 (6%) Query: 16 AGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQ 71 +GC P Y +P P ++S S + + ++ WW F D LN+L++ AL Sbjct: 34 SGCADFRPPVYQRPETPA-KAEWSRQESITVSPAEAVQPNWWLGFKDPYLNQLIERALSG 92 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS--------- 122 N I RI A I RA P F STGQ + Sbjct: 93 NYDIKVLAARIRVANAQIGEARAGGLPVIDIGAGASF-----EKSTGQKSTWTYSAGAQL 147 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +W ID++G+ + +++ A + A L +++ + +Y F E+I + + Sbjct: 148 NWDIDIWGKVEKGVQAQTAEFRATEADWRAGYLTLVANVSTTYFQILQFDEQIEQQSRTV 207 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ + + G K+ +++ +AEI + D+ L +S + + ++TL+G PA Sbjct: 208 AKNQQILSTYQAMYQNGLVPKIRVMQQQAEINRLNKDLLELRRSRDVAENALATLVGVPA 267 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + QP + G+P+ L+ RPD+ E ++ + +G A+ P Sbjct: 268 GNLKVPAGRLQDRVQPPA---VPAGLPSQLLARRPDVVAAEYRVLAAYNIVGQARLAQLP 324 Query: 302 SLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S+SL G+ + + + + F P + LP+ D +++ ++ E+ + Sbjct: 325 SISLTARGGTASFALSDLLKSFT--FGFMPSINLPMLDP-NVRARVKTTEAQVGVAENEY 381 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 TV+ A +EVE AL +++ KK +LQ VE + + ++G S L++ + E Sbjct: 382 GRTVMTAFEEVETALVNVDAHKKQRIELQQQVEQLRVVSAQIEAQLKEGVVSQLEVFETE 441 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R+ ++ L +Q+ V LY A+G G+ Sbjct: 442 RSLLAAQLQLLAVHQQILGDTVTLYKALGGGW 473 >gi|50122369|ref|YP_051536.1| multidrug resistance outer membrane protein [Pectobacterium atrosepticum SCRI1043] gi|49612895|emb|CAG76345.1| multidrug resistance outer membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 467 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 207/461 (44%), Gaps = 36/461 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQ 71 +LLAGC++ P YT P P+ S +S + W++F D L LV +AL Sbjct: 14 LLLAGCSMAPTYTTPPSPITEQWKSDRHSSATTD------WKTFIQDERLRHLVDMALAN 67 Query: 72 NLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ--LDSDWK-- 125 N + Q ++ A+ RAD P + S S + +P + TGQ + S+W+ Sbjct: 68 NRDLRQTLLNVDVARAQYRIQRADRLPGIEAQGSGSRQRVPG-DISPTGQAAVQSEWRSG 126 Query: 126 -------IDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +DLFG+ + + E LA ++A A++ +I++++ +Y+ +R Sbjct: 127 VGLAAFELDLFGRVKSLSDAAMEEYLATENNARG----ARITLIAEVVQAYLTRNGAVQR 182 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + L + ++ L + G S L + ++ ++ + + R + + + Sbjct: 183 YELTNSTLQSRQDSLRLISERRAVGVASALDYQEALGLVEQARAEREQVTRQLRQSENAL 242 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G + Y+ ++S + L I +G P+ L+ RPDI E +L A IG Sbjct: 243 RLLVG--TNDIDRYLPQKSVAEEAILQ-NIALGTPSQLLAYRPDIEAAENRLKSRNASIG 299 Query: 294 IAKSDLYPSLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P +SL G S + + F WSF P++ LP+F G +N+ A Sbjct: 300 AARAAFFPRISLTGMYGSASTELSDLFSSGQQAWSFSPQITLPLFSGGSNMANLDVANLR 359 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++T+ A +EV +AL + + ++ + + + +S+ L+ Y G Sbjct: 360 KEIAVADYEKTIQTAFREVSDALDATDTLRREALAQESLTKTNLESLRLAEARYAGGVDG 419 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L LD +R ++ L + Q + LY A+G G++ Sbjct: 420 HLRYLDAQRRAFGSQIQLIDIRTQHQVALSTLYRALGGGWH 460 >gi|121592697|ref|YP_984593.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120604777|gb|ABM40517.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 517 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 101/424 (23%), Positives = 188/424 (44%), Gaps = 37/424 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW SF D L+ L+ ALQ N + QA RI A+ + RA P S + R+ Sbjct: 85 WWRSFGDAQLDALITQALQGNPGLQQAAARIARAEAFADTARAAQSPQVNGSLDATRQRY 144 Query: 109 IPN----------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 N +++ T +L W++D FG+ R + ++L +A A + A+L + Sbjct: 145 SANGPYPPGQAGAIRSVETARLSGSWELDFFGKHRAALAAALGEAQAARADAEAARLLLA 204 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S++ Y + + ++A + L + ++L + G ++L L + E + Sbjct: 205 SRVAQGYFQLARLQAQRAVAERTLQQRTEMLQLVQRRVQAGLDTQLELRQSEGTLPEARQ 264 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-----GIPADLI 272 I L + + + + L+ P T + P I+ +PADL+ Sbjct: 265 QIEALREQEALARNALGALIADPQT---------AQTLTPQALAAIHFSETPAAVPADLL 315 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 RPD+ ++ + +G+A++ YP++SL + L D + W GP Sbjct: 316 GRRPDVAAARWRVEAATQDMGVARAQFYPNVSLTAFVGLASVGLDRFIEAGSREWGVGPA 375 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G++++N+R + ++ +L A+++ + L S + + +T+ + A Sbjct: 376 LRLPIFDAGRLRANLRGKAADRDAAVESYNAALLEAVRDAADQLASSSSIARQITEQRQA 435 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 E + + ++ Y G + L +L E A ++ VDL A R+L + V + A+ Sbjct: 436 GESAQAAYGIARRRYEAGLGTYLQVLTAESQVLAQRRLAVDL--AARRL-DNQVGVMRAL 492 Query: 447 GSGY 450 G GY Sbjct: 493 GGGY 496 >gi|315497091|ref|YP_004085895.1| rnd efflux system, outer membrane lipoprotein, nodt family [Asticcacaulis excentricus CB 48] gi|315415103|gb|ADU11744.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] Length = 446 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 105/453 (23%), Positives = 205/453 (45%), Gaps = 19/453 (4%) Query: 6 AIFSLF-----IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 A+F L + L CT P Y P +P+ T + LI+ WW SF D Sbjct: 4 ALFGLLGTCLSAIGLTACTSTP-YVTPQVPVAETYLH-QTAATLIDKPPSAWWTSFGDAQ 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN LV L N + A + A+ R D +PS S+S + T+ + L Sbjct: 62 LNALVSTVLTHNNDLAAAGLTLKKARLTAGLSRLDKWPSLSGSVSASHAGD--TSYSASL 119 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAH 178 ++ DL+G R + AN ++ D+A +L ++ Y + +IS+ Sbjct: 120 SVSYEADLYG-RLNDTLRAANWEAQATAEDLAATRLALVGTTAELYWTIGYTHRQISVGQ 178 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L +K ++L + GA S + + + + + + E+ + L+++ +++ LLG Sbjct: 179 EDLAHARKVLDLVTTQHDAGAASGVDVAEAQQNVSAQEASLAALQQNLVEYRASLAVLLG 238 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + + + P +P + G+PADL+ RPD+R E +L +++A + + Sbjct: 239 -----GIRWDVTREPQILPQTPLPEVQAGLPADLLGQRPDLRAAEMRLREALATVDATRK 293 Query: 298 DLYPSLSLNGS-IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP+ +L+GS ++ + + N S L LP D +I +N+R +++S + Sbjct: 294 SFYPTFTLSGSEGGISSELAEVLKNPSGSVAATLSLPFLDYARIHTNVRVSQTSYEIAVA 353 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ T L A+ +V+NAL++ + + A++ +++ +L + Y+ G +L LD Sbjct: 354 RFKTTWLQALADVDNALSNHTQLAQKAAAEAQALKAAQRAEALYAVQYKTGAVALRVWLD 413 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ ++ + K+ + LY A+G Sbjct: 414 ARQSARAAQLSYDNVRLAQFKNRLTLYQALGGA 446 >gi|119471293|ref|ZP_01613796.1| putative outer membrane transport protein [Alteromonadales bacterium TW-7] gi|119445759|gb|EAW27042.1| putative outer membrane transport protein [Alteromonadales bacterium TW-7] Length = 471 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 113/467 (24%), Positives = 223/467 (47%), Gaps = 41/467 (8%) Query: 7 IFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + +L ++LL+GC + P+ + +P Q+ + +++ +D +W N L K Sbjct: 9 LLALSVILLSGCASNINPQERQQAPSNVPKQWQQQAASSVLQVDD-EWLTQLNTPLLKKY 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTG-Q 119 V AL+ N +LQ + + K+ +++ ADL+PS + S S P N++ Sbjct: 68 VNQALKNNQQLLQTSYDVAITKQQLIASGADLWPSLDLSTRTSRSKDNRPVSYNNASSVS 127 Query: 120 LDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L+ ++++DL+G+ E++L+ L + A+ + AK ++S ++ + D + A Sbjct: 128 LNLNYEVDLWGKLSDSKREANLSYL-AQKARFEQAKQQLVSDVVQGWFD-------VVSA 179 Query: 178 HQILDLYKK-------NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 Q+LDLYK+ N+++ + QG L + E+ + S I T S Sbjct: 180 QQLLDLYKRREENAKQNLDIIESGYRQGINEALDVYLARNELNNERSRIATQTASLSSAA 239 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + LLG YP ++N P + I +GIP++LI +P + +L + Sbjct: 240 RLLERLLGEYPKGAI------SASNDLPVINTEIPLGIPSELITRKPALLASWYELLATD 293 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A + A +PSL+L S++ + D + F + WS + PIF+ G++++N Sbjct: 294 ASLAYAHKQRFPSLNLTASLSDSTDRVSDLFSPSSLAWSLLGSISAPIFEGGRLQANEEI 353 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS---LSMIN 403 A + Q+Q + +T+ +A +VENA I++ + + + +E K +++ LS Sbjct: 354 ARLNTQKQEQQYLQTLYDAFGDVENA---ISQQQSLKAQYTSTLEAQKNALAAEQLSFEQ 410 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G + +LD + + + L K QL + ++L++A+G + Sbjct: 411 YQSGLVTYTTVLDAQDRSFDAQSSLIQIKNQLIANRINLHVALGGDF 457 >gi|21231778|ref|NP_637695.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768096|ref|YP_242858.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. campestris str. 8004] gi|21113487|gb|AAM41619.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573428|gb|AAY48838.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. campestris str. 8004] Length = 503 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 120/483 (24%), Positives = 213/483 (44%), Gaps = 58/483 (12%) Query: 16 AGCTVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC +GP YTKP P + PT + + WWE D L +LV A Sbjct: 24 GGCMLGPNYTKP--PAVAETAVQAPTLHRASAADVVAAAPLNHWWEDLRDAQLTQLVTQA 81 Query: 69 LQQ--NLTILQATERINAAKENILSVRADLFPSSYASISHRFIP---------------- 110 L NL QA R N A N RA+ P AS + + Sbjct: 82 LADSPNLRAAQARLRANRALAN--QRRAERLPKLNASALYAYAEPPQTIVDTLGGLQNGQ 139 Query: 111 ------------NLKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 NL+ T D+ W++DLFG+RR E +LA ++ A++ A++ Sbjct: 140 QGQPPAQGSQALNLEKTELYTAGFDASWELDLFGRRRRAAEGALAQAQASEAELADAQVQ 199 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ Y++ R + R++IA LD ++++ L + QGA S L + ++ +++ Sbjct: 200 LAAEVGQVYLNYRGLQARLAIADSNLDKIRQSLALVQQRRGQGAASDLQVEQIATQVQQQ 259 Query: 216 ESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLI 272 ++ L+ + + ++ ++G P + Q QP +P + + LI Sbjct: 260 QAQRLPLQMQQQEALDQLALMVGREPGA-----LDAQLAAPQPLPMLPTQVRVDDAGALI 314 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGP 328 R RPD+R E++LA S A+IG A + +P +SL G ++ S +N T + P Sbjct: 315 RRRPDVRKAERELAASSAQIGEALNGYFPQVSLLGGLSWVA-GSPSDFNSDALTKLAV-P 372 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L IFD G+ ++ + +A + + ++ VL A+++ AL+ ++ + + Sbjct: 373 MLRWSIFDFGRTRAQVEQARAGNAGREAAYEGAVLAALQDANTALSRFGSARQQLVVARQ 432 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A +S L G S +D+LD++R + + A+ QL YV L ++G Sbjct: 433 AEASATRSAGLMQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVYYVALQKSLGL 492 Query: 449 GYN 451 G++ Sbjct: 493 GWS 495 >gi|224588154|gb|ACN58778.1| probable outer membrane protein [uncultured bacterium BLR8] Length = 487 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 106/416 (25%), Positives = 199/416 (47%), Gaps = 23/416 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--- 108 WW SF+ ++LN L+ AL + + A ER+ A+ + LFP++ S Sbjct: 75 WWNSFDSSALNGLIDEALAGSSDLAIAQERVTQAEIALRVAGGSLFPTASVGASTSAGRT 134 Query: 109 ------IPNLKTNST-GQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVI 157 +P + ST L +++DL+G+ RR ++LA S Y ++ AKL++ Sbjct: 135 GSADSSLPETERRSTSASLSIGYEVDLWGRLAANRRGSRAALAA--SRY-DMESAKLSLE 191 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + +Y + R+ IA + L + ++ + ++ ++ G + L L + + + Sbjct: 192 TSVAFTYFQLLSTRARLDIARENLAIAERVMGITDARYRNGVATALDLSQQTTAVLQQRT 251 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + LE R ++ LLG F Q F+ + G+P++L+ RPD Sbjct: 252 AVIPLEVQVRQTASALALLLGRVPQGF----NVQGETFEQIAVPAVAAGLPSELLTRRPD 307 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIF 335 + E +LA + A + A++ L PS+SL+GS L+ S S G L IF Sbjct: 308 LAAAEAQLAAADADVVAARAALLPSISLSGSGGLSTPALLSLADPTHTLSIGLSLAQTIF 367 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + ++ A S + T++ + A+KEV++ L++ ++ + Q V ++ Sbjct: 368 DGGRNVAQVQSARSQRRILVETYEAAIRGALKEVDDGLSNADQGARQEASQQETVVQARR 427 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++SL+ + YR+G L +LD +R + + LS A+ Q + +DLY A+G G++ Sbjct: 428 ALSLAELRYREGAGDQLSLLDAQRTLFQAQDQLSQARLQRLGAALDLYKALGGGWS 483 >gi|222112677|ref|YP_002554941.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221732121|gb|ACM34941.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 502 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 114/485 (23%), Positives = 215/485 (44%), Gaps = 43/485 (8%) Query: 1 MNILR--AIFSLFIVLLAGCTVGPEYTKPHMPL--------LPTQFSI-----GNSKNLI 45 MN L + + + GC VGP++ +P P LP Q + G ++ Sbjct: 1 MNTLARYTMLATLTAAMGGCAVGPDFQRPAAPTVHSYAAAELPAQTASAPGLGGEAQRFA 60 Query: 46 NIDTL--KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS 103 + +WW++F +L++LV ALQ N + A + AA+E + R +PS A+ Sbjct: 61 PGQEVAAQWWKAFGSPALDELVASALQANPDLKAAEAALRAAREAATAQRGAFWPSVDAN 120 Query: 104 IS---HRFIPNLKTNS----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQV 149 ++ + L + + T QL + D+FG RR +E+ A +D Q Sbjct: 121 VNSTRQKIAATLASPAESGDTFYTLHTAQLSISYVPDVFGGTRRQVEALSAGVDVQRFQR 180 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + + ++S ++ + I+ + +I ++DL + ++++ + G + E Sbjct: 181 EAVYMTLVSNVVNTAIEEASLRAQIDATRGLIDLASQLLDITRRQRLAGHLGAADVAAQE 240 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--G 266 A + ++ +P LEK + ++ L G P+ + + + S L +P+ + Sbjct: 241 AALAQAQASLPPLEKQLAAQRNKLAMLAGRLPSEQLAQHFELAS------LTLPVELPLS 294 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH 323 +P+ L+ RPD+R + +L + A+IG+A + PSL+L GS AL+ Sbjct: 295 LPSRLVEQRPDVRAAQAQLHAASAQIGVATAARLPSLTLTAALGSSALSLPQLLRSGGGF 354 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS G L PIF G + R AE++ ++ ++ TVL A + + L +I D + + Sbjct: 355 WSVGGDLLQPIFRGGTLLHQQRAAEAAYEQAAEQYRSTVLTAFQNTADTLQAIVSDSETL 414 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 HA ++S+S+ G + D+L ++ + L A+ + V LY Sbjct: 415 RATSHAEAAARRSLSIVRRQRELGGAAQADVLLAQQTYQGATLALVQAQAARYTNTVALY 474 Query: 444 IAIGS 448 A+G Sbjct: 475 QALGG 479 >gi|325521728|gb|EGD00480.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 482 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 214/465 (46%), Gaps = 49/465 (10%) Query: 18 CTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C++ P+ +P MP+ T + + N L W F D L +L+++AL N + Sbjct: 19 CSIAPKLIRPAMPVPGTYTAATAAATAQHANAADLGWRTMFGDRRLQRLIELALDNNRDL 78 Query: 76 LQATERINAAKENILSVRADLFPS--SYASISHRFIP-----------NLKTNSTGQLD- 121 A + AA+ R+ PS + AS + + P +++T + Sbjct: 79 RLAALNVQAAEAQYGIQRSARLPSVGAGASFTRQRTPANADMNPPVPESMQTQYGVNVGI 138 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERIS--- 175 S ++IDLFG+ + + D+A+A+ D + V L+ S +A +F ER++ Sbjct: 139 SAFEIDLFGRVKSLS------DAAFARYLATDHGRRAVQIALVGSVANA-YFAERLAQEQ 191 Query: 176 --IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++ + L+ ++++++L+ S + + + E ++ S +D+ ++ + + Sbjct: 192 RALSERTLNDWRQSLDLARRLKQANQASGVDIAQAEGQVASATADLEARSRAVEQARNAL 251 Query: 234 STLLGYPATEFLHYM-QKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVA 290 L+G TE + + S QP +P + G+P++L+ RPDI+ E+ L + A Sbjct: 252 RLLVG---TELPKDLPEPLSLERQP---VPTQLPAGLPSELLYRRPDIQQAEQALVAANA 305 Query: 291 KIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P LSL +I + F G + W+F P++ +PIF+ G++++ +R A Sbjct: 306 DIGAARAAFFPRLSLTSTIGFLSPAMGSLFAGDHRTWAFAPQITVPIFEGGRLRAELRLA 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + A +EV + L + + + V ++ L + YR G Sbjct: 366 AVRKSSAVAEYERAIQTAFREVADGLAGRETFSRQIEAQRDVVRSAERRTDLVNLRYRAG 425 Query: 408 RYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD +R A + +DL A+ + V LY A+G G Sbjct: 426 IEDRLELLDSQRQLYAARQALLDLRSAE---LSNAVALYKALGGG 467 >gi|170750087|ref|YP_001756347.1| RND efflux system outer membrane lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170656609|gb|ACB25664.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium radiotolerans JCM 2831] Length = 511 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 120/482 (24%), Positives = 211/482 (43%), Gaps = 57/482 (11%) Query: 15 LAGCTVGPEYTKPHMPLLP--TQFSIGNSKNLINIDTLK-----------------WWES 55 L+ C VGP Y P P + T+ + N I T + WW Sbjct: 22 LSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQGGSADQSFVSGADIPGSWWTL 81 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLK 113 F+ +LN+LV+ AL N T+ A + A++N+L+ + L+PS A+ I P L Sbjct: 82 FHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKGTLYPSLTATPQIQGALAPGLD 141 Query: 114 TNS-------------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 S T Q + D+FG RR IES A ++ Q++ A L++ + Sbjct: 142 LQSPLNNQNQYLYSLSTPQAVVSYNPDVFGGNRRQIESLEATTENQRFQLEAAYLSLTAN 201 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + I + +I +++ + ++L + + + G + +V+ +A + + + Sbjct: 202 VVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLGQIAGADVVQQQAALALSQQLL 261 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRNR 275 P LEK+ + ++ L G P+ E S F L +P + + +P+ L++ R Sbjct: 262 PPLEKALAQQRNLLTALAGRLPSDEV-------SETFDLAALRLPTRLPVSLPSRLVQQR 314 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALT-HDNSFPGYNTHWSFGPKLY 331 PD++ E + + A +G+A ++ P SL GS A + PG G + Sbjct: 315 PDVKAAEALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTSPGAAFFTIIG-QAT 373 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIFD G + R AE S E ++ TV+ A + V +AL ++ D K V AV Sbjct: 374 APIFDAGTLFRRQRAAEESLTEAQAQYKATVITAFQNVADALRALQADAKAVAAADAAVS 433 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGS 448 +S++L Y G + +L ++ V + A+ A Y D L++A+G Sbjct: 434 ATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAAR---ATQYADTAALFVALGG 490 Query: 449 GY 450 G+ Sbjct: 491 GW 492 >gi|33598461|ref|NP_886104.1| putative outer membrane efflux protein [Bordetella parapertussis 12822] gi|33574590|emb|CAE39239.1| putative outer membrane efflux protein [Bordetella parapertussis] Length = 500 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 108/470 (22%), Positives = 215/470 (45%), Gaps = 50/470 (10%) Query: 16 AGCTVGPEYTKPHMPL--------------LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 GC VGP+Y +P + + P Q S +++ +WW+ + D L Sbjct: 27 GGCAVGPDYQRPAIDVGAAYKEAAAPQPGWTPAQPSDESARG-------QWWQVYGDPVL 79 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ 119 + LV+ Q N ++ QA A+ + + RA FP+ + A ++ + Sbjct: 80 DGLVQQLNQGNYSVAQAEANYRQAQALVRNARAGFFPTIGAGADVTRSGSGGGSGAGSNG 139 Query: 120 LDS----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 W++D++G+ RR +ESS A ++ A + +L+ + L+ +Y+ R Sbjct: 140 SSVGNQYSLSGSVSWEVDVWGRVRREVESSRAEAQASAADLAATRLSAQAALVQNYLQLR 199 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+ + + Y++++ L+ ++ G K + ++++ + L+ Sbjct: 200 VLDEQKRLLDATVLAYERSLRLTQNRYEAGVVGKSDVAVARTQLENTRAQSIDLDWQRGQ 259 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G + F Q + P+ I G+P+ L+ RPD+ E++ A + Sbjct: 260 FEHAIAVLMGQAPSRFALPAQPFAQQL-PD----IPAGLPSQLLERRPDVAAAERRAAAA 314 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNI 344 A+IG+A++ +P L+L+ S F + T W+ GP L + +FD G + + Sbjct: 315 NAQIGVAQAAWFPDLTLSASGGF-RSGQFAEWLTAPARFWTLGPALAMTLFDGGARSARV 373 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMI 402 +A ++ Q ++++VL A++EVE+ L + E ++ V + +A+E ++S+ L+ Sbjct: 374 EQARAAYDAQAAAYRQSVLTALREVEDYLVQLRVMEHEQQVQR--NALESARESLRLARN 431 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y QG L + +E E + +S+ +L S V L A+G G+ Sbjct: 432 QYEQGLIDYLSVAVLETTALNTERNAISLLGSRLNAS-VQLIAALGGGWQ 480 >gi|33603403|ref|NP_890963.1| putative outer membrane efflux protein [Bordetella bronchiseptica RB50] gi|33577527|emb|CAE34792.1| putative outer membrane efflux protein [Bordetella bronchiseptica RB50] Length = 500 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 108/470 (22%), Positives = 215/470 (45%), Gaps = 50/470 (10%) Query: 16 AGCTVGPEYTKPHMPL--------------LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 GC VGP+Y +P + + P Q S +++ +WW+ + D L Sbjct: 27 GGCAVGPDYQRPAIDVGAAYKEAAAPQPGWTPAQPSDESARG-------QWWQVYGDPVL 79 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQ 119 + LV+ Q N ++ QA A+ + + RA FP+ + A ++ + Sbjct: 80 DGLVQQLNQGNYSVAQAEANYRQAQALVRNARAGFFPTIGAGADVTRSGSGGGSGAGSNG 139 Query: 120 LDS----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 W++D++G+ RR +ESS A ++ A + +L+ + L+ +Y+ R Sbjct: 140 SSVGNQYSLSGSVSWEVDVWGRVRREVESSRAEAQASAADLAATRLSAQAALVQNYLQLR 199 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+ + + Y++++ L+ ++ G K + ++++ + L+ Sbjct: 200 VLDEQKRLLDATVLAYERSLRLTQNRYEAGVVGKSDVAVARTQLENTRAQSIDLDWQRGQ 259 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G + F Q + P+ I G+P+ L+ RPD+ E++ A + Sbjct: 260 FEHAIAVLMGQAPSRFALPAQPFAQQL-PD----IPAGLPSQLLERRPDVAAAERRAAAA 314 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNI 344 A+IG+A++ +P L+L+ S F + T W+ GP L + +FD G + + Sbjct: 315 NAQIGVAQAAWFPDLTLSASGGF-RSGQFAEWLTAPARFWTLGPALAMTLFDGGARSARV 373 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMI 402 +A ++ Q ++++VL A++EVE+ L + E ++ V + +A+E ++S+ L+ Sbjct: 374 EQARAAYDAQAAAYRQSVLTALREVEDYLVQLRVMEHEQQVQR--NALESARESLRLARN 431 Query: 403 NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y QG L + +E E + +S+ +L S V L A+G G+ Sbjct: 432 QYEQGLIDYLSVAVLETTALNTERNAISLLGSRLNAS-VQLIAALGGGWQ 480 >gi|301310414|ref|ZP_07216353.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] gi|300831988|gb|EFK62619.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] Length = 456 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 103/432 (23%), Positives = 201/432 (46%), Gaps = 42/432 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 FSIGN + W + F D +L L++ L N + A ++ A+ +++ R Sbjct: 47 FSIGN---------ISWRDLFTDPALQSLIERGLANNTDLRIAHLKVQEAEAALMTSRLS 97 Query: 96 LFPS----------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ----RRHIESSLAN 141 PS S+ + N+ +++ W++D+F + +R +++L+ Sbjct: 98 YLPSLSLDPQGTTSSFDKAKASWTYNVPVSAS------WEVDIFDRLTNAKRQAKAALSQ 151 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 AY+Q + +I+ + Y + I + + +++ + G T+ Sbjct: 152 -SQAYSQA--VQTQLIANIANLYYTLLMLDRQYEITTETAVKWLESLRTTQALMAAGMTT 208 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + ++ + EA SIE+ + LE++ R + ++ LLG + + + + + P+L Sbjct: 209 EAAVSQTEATCYSIETSVKDLEQTIRETENTLAVLLGETPQD-IERGRLEDQSLTPDL-- 265 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSF--- 317 IGIP ++ NRPD+R E LA + A+S+ YPSL L+GS T+ S+ Sbjct: 266 --AIGIPVQMLSNRPDVRSAEYALAQAFYGTASARSNFYPSLRLSGSAGWTNSAGSYIVN 323 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 PG + G L P+F+KG + ++ A++ +E +T+Q+TVLNA KEV +ALT Sbjct: 324 PGKLLLSAVG-SLTQPLFNKGANIAQLKIAKAQQEEAKLTFQQTVLNAGKEVNDALTQAQ 382 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K + H +E + ++ + + G + L++L ++ ++ + + Sbjct: 383 TAKGKIDLRTHQIESLEDAVRSTQLLMTHGNTTYLEVLTAQQTLLSAQLSQVTDRFDELQ 442 Query: 438 SYVDLYIAIGSG 449 + V+LY A+G G Sbjct: 443 ATVNLYQALGGG 454 >gi|332530463|ref|ZP_08406405.1| RND efflux system, outer membrane lipoprotein, NodT family [Hylemonella gracilis ATCC 19624] gi|332040090|gb|EGI76474.1| RND efflux system, outer membrane lipoprotein, NodT family [Hylemonella gracilis ATCC 19624] Length = 471 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 107/467 (22%), Positives = 202/467 (43%), Gaps = 48/467 (10%) Query: 13 VLLAGCTV-GPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LL+ CTV P Y +P + + P + + + + W F D L L+++A Sbjct: 12 ALLSACTVLTPSYERPALSVPDVWPAEIQV--DARTVAAKPVAWESFFPDERLRALIQLA 69 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-NLKTNSTGQLDS--- 122 L+ N + AT R+ A+ RAD PS + S++ P +L + L Sbjct: 70 LEHNRDMRIATARVLEAQALYGVQRADRLPSLNAGGSVARSRTPGDLSGTGSSVLGRRAD 129 Query: 123 ------DWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERIS 175 +++D +G+ + + A Q + + +L++I+ + +Y+ ER+ Sbjct: 130 VNVAIPSFELDFWGRVASLSDAAKASYLATEQAERSFRLSLIANVADAYLAQSEADERLQ 189 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A L + EL + G L ++ +A + +++ +L + + ++T Sbjct: 190 LAQATLKTRAQTRELVDQRRKGGLAGDLDYLQADAAYEGARAEVASLTRQQSAARNYLAT 249 Query: 236 LLGYPATEFLHYMQKQSNNFQP-------NLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 L+G Q N P + + +P+ ++ RPD+R E++L + Sbjct: 250 LVG-----------TQPANLPPARSLAAQGIALDQQAELPSQVLLRRPDVRAAEQRLLAA 298 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG A++ +P + GS D F + WSF P + LPIF G+ K+N+ Sbjct: 299 NANIGAARAAFFPRIGFTGSTGFASSEIDGLFKSGSQAWSFTPTISLPIFQGGRNKANLD 358 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI--- 402 A +++T+ A +EV + L + ++ + +LQ AVE ++S + + Sbjct: 359 LATVRKDIAVAEYEKTIQQAFREVADQLVARDQ---LAAQLQ-AVEAQERSQQRATLIAE 414 Query: 403 -NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 Y QG S L++LD +R V+ L +R + + LY A+G Sbjct: 415 ARYAQGVGSFLEVLDAQRQLFSVQQSLIQVRRSMWSAAAQLYKALGG 461 >gi|328953228|ref|YP_004370562.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] gi|328453552|gb|AEB09381.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] Length = 467 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 50/481 (10%) Query: 3 ILRAIFSLFIVL---LAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINID------TLKW 52 ++R I +L +++ L GCT+ PEYT+P P +P + G + KN ++W Sbjct: 1 MIRKILALLVIIAVPLTGCTLIPEYTRPEAP-IPQDWPSGPAYKNASPAPDAPLAAEVQW 59 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR----- 107 F D L ++ +AL+ N + A + A+ RA+LFP+ IS R Sbjct: 60 RTFFADQRLQTIIAMALKNNRDLQVAALSVEKARAMYRVQRAELFPTVETGISARKERVK 119 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVI 157 + NL+ S S W+ID FG+ +R +E LA+ + A++ +I Sbjct: 120 ISGTQGMVNLEEYSINLGISSWEIDFFGRIRSLKKRALEEYLASEQGRRS----AEILLI 175 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S++ +Y+ +E + +A L+ + L +F G +L L +++ + + Sbjct: 176 SEVANAYLTLAADRENLKLARSTLETQQAAYNLIRRRFEVGFAPELDLRQVQTRVDTARV 235 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 D+ + + + + L G P L + ++ + +P +P ++ G ++++ RP Sbjct: 236 DVARYTELTAQDENALHLLAGSPIPADL--LPRELSLVKP---LPDVSPGTSSEVLLRRP 290 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLP 333 DI E L + A IG A++ +P +SL +I + + T WS+ P++ LP Sbjct: 291 DILQAEHVLKAANANIGAARAAFFPRISLTSAIGTASGDLSGLFETGSFVWSYAPRIVLP 350 Query: 334 IFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IFD + + + + + AQ QY + ++ A +E +AL S + Q V Sbjct: 351 IFD-ARTRPALEATQVARKIAQAQY---ERSIQIAFRETADALASRGTLGDRMAAQQSLV 406 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + ++ LS Y +G L++LD +R+ + L IA R LAK + V LY +G Sbjct: 407 DATARTYQLSNARYEKGIDIYLNVLDAQRSLYAAQQGL-IAIR-LAKLANQVRLYAVLGG 464 Query: 449 G 449 G Sbjct: 465 G 465 >gi|330995698|ref|ZP_08319596.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Paraprevotella xylaniphila YIT 11841] gi|329574757|gb|EGG56318.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Paraprevotella xylaniphila YIT 11841] Length = 456 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 108/454 (23%), Positives = 212/454 (46%), Gaps = 25/454 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LL+ C + Y +P + N S + + + + W E F D L L++ L Sbjct: 12 ALLSSCGLYKSYERPADIQTDGLYRSDNTQSGDSLGLASFAWREIFTDPQLQTLIERGLA 71 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYA---SISHRFIPNLKTNSTGQLDSDWKI 126 QN + A +I ++ ++ + + PS ++A S++ T + + W+I Sbjct: 72 QNTNLRSAQLQIEQSEASLKAAKWAYIPSLAFAPQGSLAGVDWGKATQTYTIPVSASWQI 131 Query: 127 DLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D+FG + + + A L++++A + +I+ + Y K++++I+ + L+K Sbjct: 132 DIFGSLHNAKKRAKAQLENSHAYKQAVQSQLIAAIANYYYSLAMLKDQLAISQETEKLWK 191 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +N+E + G ++ ++ + EA SI + I L++ S LLG Sbjct: 192 ENVETTRALMNAGQSNMAAVSQTEANYYSICTQITDLKQQISDLEDEFSALLG------- 244 Query: 246 HYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 QK + N +P ++ GIPA + NRPD++ E +LA + +++ YP L Sbjct: 245 EAPQKYAIGSMDNWKVPTRMSAGIPAAALANRPDVKLAETQLAVAYYATNESRAAFYPGL 304 Query: 304 SLNGSIALTHD-NSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L+G+I T+D + P W + L PIF GK+++ + +++ ++ +++Q+ Sbjct: 305 NLSGAIGWTNDLGTIPVNPGKWIWNAMASLTQPIFQNGKLRAQYKISKAQQEQAKLSFQQ 364 Query: 361 TVLNAIKEVENALTSI---NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 T+L+A EV ALT I E + TK ++E KS M+N + L +L Sbjct: 365 TLLDAGTEVNAALTKIQATGEKDGLYTKQIASLETAVKSTQALMMN---SSTNYLQVLTA 421 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++ K ++ ++LY A+G GY+ Sbjct: 422 QQTLLTAQMSQISNKFSQIQAAIELYQALGGGYD 455 >gi|239816578|ref|YP_002945488.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239803155|gb|ACS20222.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 502 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 171/341 (50%), Gaps = 19/341 (5%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH 106 +D +WW+ F D +L++L N I A A+ + RA LFP+ S Sbjct: 67 LDRGEWWKLFGDATLDELAARVQVSNQNIAAAVANYAQAQALVRGERAALFPTVSLDGSG 126 Query: 107 RFIPNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 R N+ S + L DW D++G+ R+ + S+ AN +++ A + A+L+ + Sbjct: 127 RRSGNIGGTSNAANAFSATLGVDWAPDVWGRLRQAVSSAQANAEASEADLASARLSAVGD 186 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L +Y R I + Q ++ Y++ E++ ++ G ++ +++ + ++ + +++ Sbjct: 187 LATNYFSLREADAEIVLLDQTIEGYQRAFEITSNRYKAGIAAQTDVLQAQTQLVNAQAER 246 Query: 220 PTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPD 277 L+++ H I+ L+G +F L Q + P +P I G+P+ L++ RPD Sbjct: 247 VGLQRTRTTLEHAIAMLVGVAPADFSLPAAQ-----WTPT--VPGIPTGVPSTLLQRRPD 299 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPI 334 I E+ +A + A+IGIA+S +P+ L+ S+ + + F NT W+ G + + Sbjct: 300 IAAAERAVAAANAQIGIARSAYFPNFGLSASVGSSASRVKDLFNASNTLWALGLSVAQVV 359 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 FD G I + + A+++ + +++TVL A + VE+ LT+ Sbjct: 360 FDAGAIGATVDSAKAAHEASVARYRQTVLTAFQAVEDQLTA 400 >gi|17548532|ref|NP_521872.1| outer membrane CHANEL lipoprotein [Ralstonia solanacearum GMI1000] gi|17430780|emb|CAD17462.1| probable outer membrane chanel lipoprotein [Ralstonia solanacearum GMI1000] Length = 476 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 112/476 (23%), Positives = 214/476 (44%), Gaps = 59/476 (12%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++ L+ C++ P KP +P+ T + + + L W F D L +L+ + L Sbjct: 8 LVLALSACSLPPALIKPALPVPATFPAESGPETQAHAADLGWRTMFGDRRLQRLIGLTLA 67 Query: 71 QNLTI---------------LQATERI------NAAKENILSVRADLFPSSYASISHRFI 109 N + +Q R+ +A + P++ A+ S ++ Sbjct: 68 NNRDLRLAALNVETVRAQYSIQRAARLPGIDATGSASRQRTAANDGASPAALAANSEQYG 127 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-------DIAKLNVISKLIP 162 N+ N+ ++IDLFG+ R + D+A+A+ A+++++ + Sbjct: 128 VNVGLNA-------FEIDLFGRVRSLS------DAAFARYLASDQGRRAAQISLVGAVAD 174 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y R +E+ +A L ++++++L+ T S L + + E ++ + ++D+ Sbjct: 175 AYFAERLAQEQRQLAEHTLADWRQSLDLARRLKTAKQNSDLDVAQAEGQVANAQADLEAR 234 Query: 223 EKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ +++ L+G PA S QP + + G+P++L+ RPDIR Sbjct: 235 TRALAQAGNSLQRLVGAGLPA----DLPAPLSLETQP-VVTQLPAGLPSELLIRRPDIRQ 289 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E LA + A IG A++ +P LSL S+ + F G + WSF P++ P+F Sbjct: 290 AEHNLAAANADIGAARAAFFPRLSLTASLGYASPAMGSLFDGGHRVWSFSPQITQPLFQG 349 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++++ +R AE ++ T+ A +EV + L + + AV ++ + Sbjct: 350 GRLRAELRLAELRKSSAIAEYERTIQTAFREVADGLAGRATYGRQIEAQIRAVASAERRV 409 Query: 398 SLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKS-YVDLYIAIGSG 449 LS + YR G L++LD +R A+ + +DL RQ A S V LY A+G G Sbjct: 410 ELSNLRYRAGVEGRLELLDSQRQLYASRQALLDL----RQGAFSNAVALYKALGGG 461 >gi|146300971|ref|YP_001195562.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146155389|gb|ABQ06243.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 469 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 230/484 (47%), Gaps = 55/484 (11%) Query: 4 LRAIFSLFIVLLAG-----CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESF 56 +R ++ + I + +G C VG +Y++ + P ++ + + DT+ W + Sbjct: 1 MRILYKIGITVFSGMILTSCVVGKKYSRTELNA-PDKY---REELTVTGDTILHSWKTYY 56 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY------ 101 D L L++ AL +N +L A + + N + L P+ SY Sbjct: 57 KDPLLVNLIEKALVKNNEVLIAVKSMEQLDLNYKQAKLSLLPTLDFDAAASRSYLSKNSL 116 Query: 102 -ASISHRFIP-NLKTNSTGQLDSDWKIDLFG----QRRHIESSLANLDSAYAQ---VDIA 152 S+S +F + + + L W++D++G Q+R +++ +AQ + Sbjct: 117 NGSLSAQFTSKDYMDDYSANLRMSWEVDIWGKATMQKRDAKAAY------FAQKENLSAL 170 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 K +I ++ SY + E++ IA + ++L +++ L++ G+ S L++ + EA+ Sbjct: 171 KTRIIVQVAQSYYNLLGLDEQLKIAEKNIELSDNTLQMMKLQYNSGSISSLAVNQTEAQK 230 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 K+ E +P + + + + + L G YP T +++ N + G+PA L Sbjct: 231 KTAELLVPLAKTNIAVQENALQILCGEYPNT-----IERSGNLNVDEFAFEMPSGVPASL 285 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSF 326 + RPD++ E + + AK G+AK+ +YP+LSL+ SI + +FPG T + Sbjct: 286 LSRRPDVKSSEYAVMSATAKTGLAKATMYPTLSLSPSIGINSFEFDTWFNFPGSVTK-NI 344 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTK 385 L PIF K +++ A ++ + ++++ + A+ EV +A++ + D++I Sbjct: 345 AANLAQPIFRKKALRTAYEVAVLEQEKAVVQFKQSFITAVGEVSDAMSRLKYADERIKLA 404 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + A+ L K + S++ Y+ G + L+I+ + + + ++D+ K + + ++LY A Sbjct: 405 EEKAISLEKATSDASLL-YKSGMANYLEIIAAQNSALQNDLDVVTIKLEKLNASINLYRA 463 Query: 446 IGSG 449 +G G Sbjct: 464 LGGG 467 >gi|330937729|gb|EGH41626.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 460 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 101/422 (23%), Positives = 194/422 (45%), Gaps = 34/422 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 W FND +L +L++ AL N + A I+A + R+DLFP S+ S S + + Sbjct: 30 WRHFFNDPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRV 89 Query: 110 PNLKTNSTGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 P ++ TGQ S +++DLFG+ R + E +L S+ +++++ Sbjct: 90 PGDQSQ-TGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLV 148 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + +Y+ + KE + + L Y+++ L+ G +S L L + ++S + Sbjct: 149 ASVANAYMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARA 208 Query: 218 DIPTLEKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + ++ + +++ LLG PA+ L ++ + G+P+DL Sbjct: 209 KLAQYQRLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDL 258 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 ++ RPDI E L + A IG A++ +PS+SL S + F G + W F P Sbjct: 259 LQRRPDILQAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQP 318 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + +PIF+ G +++++ ++ + +++ + A +EV + L S + + + Sbjct: 319 SINIPIFNAGNLRASLDYSKIQKEINVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRD 378 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V ++ L+ YR G S L LD +R+ + L + S V+LY A+G Sbjct: 379 FVAANQDYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGG 438 Query: 449 GY 450 G+ Sbjct: 439 GW 440 >gi|238024074|ref|YP_002908306.1| putative outer membrane protein OprM [Burkholderia glumae BGR1] gi|55509029|gb|AAV52814.1| putative outer membrane protein OprM precursor [Burkholderia glumae BGR1] gi|237878739|gb|ACR31071.1| Putative outer membrane protein OprM precursor [Burkholderia glumae BGR1] Length = 506 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 200/459 (43%), Gaps = 29/459 (6%) Query: 18 CTVGPEYTKPHMPL---LPTQ--------FSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 CT+ P Y +P P+ P+ +S + L W + F D L L++ Sbjct: 13 CTMAPHYQRPAAPVSDRFPSDGVYATQPGADAAHSADGRAAADLGWRDFFADQRLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQL--- 120 IAL+ N + A I AA+ RA L PS S + R + T + Sbjct: 73 IALKHNRDLRVAVLNIEAARAQYRITRAGLLPSLDGSGTGNIQRLPAGVSTTGAADMTRT 132 Query: 121 -----DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + W++DLFG+ R + +++LA S A++++IS++ Y+ + + Sbjct: 133 YNVGASASWELDLFGRVRSLKDAALAQYLSTAQARKAAEISLISQVADQYLTLLSTDDLL 192 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + L + + L+ L+F G S+L L + + ++ ++ ++ ++ ++ Sbjct: 193 KVTEDTLKTARDSYHLTKLQFDNGTGSELDLRQAQTVVEQALANQQAQARARAQALNALA 252 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P + L + L I G+P+DL+ RPDI E+ L + A +G Sbjct: 253 LLIGQPLPDDLPAGLPLDSQ---GLLADIPAGLPSDLLTRRPDIMEAEQTLLAANANLGA 309 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P +SL G+ + T F WSF P L LPIF+ G +N+ A Sbjct: 310 ARAAFFPRISLTAAFGTASPTLGGLFKAGTAAWSFAPNLALPIFEGGSNLANLDLAHVRK 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + +++ + A +EV + L + + + L ++ +LS + YR G S Sbjct: 370 RIEIANYEKAIQTAFREVSDGLAARGTYDQQIAALSRNEAAQRRRYALSDLRYRNGADSY 429 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +L + + L A+ + VDLY A+G G+ Sbjct: 430 LAVLTAQTDLYTAQTTLISARLARWTNLVDLYRALGGGW 468 >gi|296158124|ref|ZP_06840956.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295891460|gb|EFG71246.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 514 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 103/474 (21%), Positives = 205/474 (43%), Gaps = 27/474 (5%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----TLKWWESFN 57 I A ++ +AGC + P +GN+ N D ++ WW ++N Sbjct: 8 GIAAAAVLTILLTIAGCASTGGVAPQASGVQPASLDVGNAIRAANADAQWPSVDWWRAYN 67 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL-- 112 D LN+ + A N ++ A R+ A R+ L P ++S ++ NL Sbjct: 68 DPQLNEWIDAAQAGNPSLAAAQARVREAMSMAGVARSALSPQVNGNLSVQRQKWADNLYY 127 Query: 113 ---------KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 N+TG L + +D++G+ ++ E +L ++ A A+L + ++ Sbjct: 128 GPGALAGEQSWNNTGTLGLSYHLDIWGRDKNAAERALDAAHASAADARAAQLELEGNVVR 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI+ + IA L ++ ++L++ + G ++L + + E + E I + Sbjct: 188 TYIEMSMNYALLDIAKSTLQQQQQIVDLANRRLKGGIGTQLEVSQAETPLPEYERQIDEI 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E+ + + ++ L G +Q+ + + +P +PADLI +RPD+ Sbjct: 248 EEKIALGRNQLAALAGK-GPGAGDSIQRPTLSLNTPAGLPS--ALPADLIGHRPDVVAAR 304 Query: 283 KKLADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDK 337 +A I +AK+D YP + S+ G A+ F +H WS GP L LPI D Sbjct: 305 WSVAAQARGIDVAKADFYPDINLLASIGGYAAMGPLFQFLKNPSHSWSGGPALSLPILDG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++S + A + E + ++++ A+K++ + + I +V +K+ Sbjct: 365 GRLRSQLGAASAGYDEAVDRYNQSIVGALKDISDQVIRIRSLATQAEDADRSVATARKNY 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS YR+G L++L + + ++ + + ++ L A+G G + Sbjct: 425 DLSREGYRRGLTDYLNVLIAQNQLLHAQEGVAKIQAERLGAHASLVTALGGGLD 478 >gi|222110157|ref|YP_002552421.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221729601|gb|ACM32421.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 484 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 27/417 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTI--------LQATERINAAKENILSVRADLFPSSYAS 103 WW F D L+ LV+ A Q N ++ +A E VRA+ S A Sbjct: 75 WWLGFQDPVLSDLVERAGQANTSVQEAAARLAEARALLRSADAERAPQVRANAGVSRQAG 134 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY--AQVDIAKLNVISKLI 161 ++ T +T L +++DLFG R S A LD+ A + +L V + + Sbjct: 135 VTTTNGTQPATLATAGLGVSYELDLFG-RLARASDAARLDAQARAALLQSTRLMVQADVA 193 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ R + ++ + L+ Y+ + L+ ++ G ++L + +++ E+ + ES+ Sbjct: 194 QTYLQLRALQAERALVDESLEAYRGTLYLTQRRYQAGDVAELDVARVQTEVAATESEALA 253 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIGIPADLIRNRPD 277 LE+ H ++ L+G AT F + P +P I G+P+ ++ RPD Sbjct: 254 LERQQAQLRHALAVLVGDVATGF---------SLPPAAVEAALPVIPPGVPSTVLARRPD 304 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 + + + + A++G+A++ +P+L+L GS + F W G L LP+ Sbjct: 305 VSAAQAAVLAAQARVGVAQAAWFPALALTGSAGFASPELGDLFKWSARSWGIGMLLSLPL 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + A + + + VL A +EVE+ L+++ AV+ Sbjct: 365 FDGGQRAAQEEGARARLEGALAAHRGQVLTAFREVEDQLSALRLLADQAQAQDRAVQSAA 424 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS YR G S L++LD R+ + + + V L A+G G++ Sbjct: 425 RATQLSDSRYRNGLVSQLELLDARRSELRNRRQALQVRTAQYVATVGLVRALGGGWD 481 >gi|150025015|ref|YP_001295841.1| outer membrane efflux protein precursor [Flavobacterium psychrophilum JIP02/86] gi|149771556|emb|CAL43027.1| Probable outer membrane efflux protein precursor [Flavobacterium psychrophilum JIP02/86] Length = 478 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 111/475 (23%), Positives = 214/475 (45%), Gaps = 39/475 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + L I L PE +P + N K+ IN + W F D +L ++ Sbjct: 11 LIPLGICLAVVSCKTPEVVSSSTKTIPESYITAN-KDTINTANIPWKTFFKDQNLVDIID 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-------------SYAS-----ISHRF 108 +AL+ N ++ + I AK +I + L PS +Y S S Sbjct: 70 VALKNNQELMITLQEIEIAKNDIRMRKGALLPSFGLRAGAGIEKVGTYTSQGAGDASAEI 129 Query: 109 IPNLKT-----NSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIP 162 P K N T + W+ID++ + R+ + ++++ S + N+I+++ Sbjct: 130 TPGNKVPENLQNYTLAAVAHWEIDIWKKLRNSKKAAVSRYLSTIEGKNFVITNLIAEVAD 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SY + + ++ I Q + L +E+ ++ ++L++ K EAE+ S +S + Sbjct: 190 SYYELQALDNQLGIVKQNIILQSNALEIIKIQKQAARATELAVQKFEAEVLSSKSKEFDI 249 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + + I+ LL YP +++ ++NF L I GIP+ L+ NRPDI+ Sbjct: 250 LQDIKQTENRINFLLARYP-----QEIKRDNSNFLKLLPSIIRSGIPSQLLANRPDIKQA 304 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLYLPIF 335 E +L + + +A+++ YPSL ++G+I L N P Y + +S + P+ Sbjct: 305 ELQLVAAKLDVKVARAEFYPSLDISGAIGLQAFN--PSYLFQLPESLLYSLAGDIAGPLI 362 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ IK+ + A + + ++ T+LNA E+ N L+ I+ +K VE K Sbjct: 363 NRNAIKAEFKNANARQLQAMYNYERTILNAYLEISNQLSKIDNLQKRYDLKSQQVEALNK 422 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S+ +S ++ R ++L +R + +++L K++ S V +Y +G G+ Sbjct: 423 SIEVSNDLFKSARVDYFEVLMTQRDALETKLELIETKKEQLNSVVHVYKELGGGW 477 >gi|330820560|ref|YP_004349422.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] gi|327372555|gb|AEA63910.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] Length = 522 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/423 (25%), Positives = 210/423 (49%), Gaps = 25/423 (5%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SY 101 T WW++F D L++L AL N T+ A A+ + S A PS S Sbjct: 74 TPDWWQAFKDPLLDELETRALAANQTLAAAAAHYVQARATLASTAAARLPSVGLNAGASR 133 Query: 102 ASIS-HRFIPNL--KTNSTGQLDSD------WKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 IS R + N + ST Q D+ +++DLFG+ RR++E++ A+ + + + Sbjct: 134 EKISADRPLTNYAQRNQSTVQNDTQLGATASYELDLFGRIRRNVEAARASTEQSADDLAN 193 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + L+ +Y+ R I + ++ + L +K ++ + GA S L+L++ + Sbjct: 194 ARLVLTADLVTAYLALRETDAEIDVLNRSVALQQKALDFVSAQHELGAVSGLNLLQQRSL 253 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + L + + H I+TL+G PA F + QP + + G+P+DL Sbjct: 254 LDATRTQAQLLLNTRQQYEHAIATLIGTPAPSF-----SIAPRVQPLIAPALPTGLPSDL 308 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGP 328 ++ RPD+ E+ +A + A+IG+A++ +P + L+ I N F + WS G Sbjct: 309 LQRRPDVASAERAMAAANAQIGVARAAYFPRIVLSPDIGWDATNFASLFTVPSLLWSVGA 368 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + P+F+ G++K+ + A++ Q +++TVL A +EV+NA+T ++ + + + Sbjct: 369 SVSQPLFEGGRLKAGVDFAQAGYQAAQANYRQTVLGAFEEVQNAVTGLSTLDEAERRARA 428 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A+E ++ +SL+ Y G + +D++ ++ E + Q A V L A+G Sbjct: 429 ALEDARRLVSLAQDRYAGGLTAYIDVISAQQQLLTSERQEVQIRGQRAALVVYLAKALGG 488 Query: 449 GYN 451 G++ Sbjct: 489 GWS 491 >gi|294339731|emb|CAZ88093.1| putative RND efflux system outer membrane lipoprotein NodT [Thiomonas sp. 3As] Length = 536 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 114/477 (23%), Positives = 207/477 (43%), Gaps = 40/477 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMP-------------LLPTQFSIGNSKNLINIDTLK--WWE 54 + LLAGC GP++ P P T +G ++ I + WW+ Sbjct: 21 IVCALLAGCAAGPDFKTPPAPQAMSYTSGKPPARTASTPGELGGAQQFIAGQPVAAMWWK 80 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD-LFPSSYASISHRFIPNLK 113 +F L+ LV +LQ + TI A + A+E + L+P A++ + + N Sbjct: 81 AFASPKLDALVVQSLQHSPTIAAAQSTLRQARETYAAQSGSTLYPQVSATLGAQTLQN-N 139 Query: 114 TNSTGQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDIAKLNVISK 159 + + G + + DL+ G RR +E+ A + Q+D A+L++ Sbjct: 140 SAAMGLPGGERRYDLYNAGVGVSYAFDLSGGNRRALEALAAQTEWRRYQLDSAQLSLAGA 199 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + + +I ++L ++ +E++ + G + + L+ +++ + I Sbjct: 200 VVATAVKQALLAAQIDALQKMLATQQEQLEITRARERLGVATASDIATLQTQMEQTRASI 259 Query: 220 PTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 L S VH ++ L G P T + ++F NL + + +P++L+R RPDI Sbjct: 260 APLRNSADQAVHLLAVLSGQEPGTA--KNPRFTLDDF--NLPADLPLSLPSELVRQRPDI 315 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 E L + A+IG+ S YP L+L+ GS ALT + F + W +L P+F Sbjct: 316 LAAEALLHAASAQIGVTVSKQYPQLTLSANLGSQALTAASLFGSGSLIWGVAGQLAQPLF 375 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G +K+ R AE+ ++ETVL +++V + L S+ D + + A + Sbjct: 376 KPG-LKAEARAAEAGFDAAAANYRETVLQGLRQVADVLRSLEHDAQALQAQSAAEAWAQT 434 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S+ L Y G S L +L ++ + + L A+ LY A+G G P Sbjct: 435 SLQLVEQQYALGTASALQLLTAQQQLQQTRIGLIAAQAARLNDTALLYQALGGGLQP 491 >gi|332872693|ref|ZP_08440660.1| outer membrane multidrug efflux protein OprB [Acinetobacter baumannii 6014059] gi|322508461|gb|ADX03915.1| AdeC [Acinetobacter baumannii 1656-2] gi|332739087|gb|EGJ69947.1| outer membrane multidrug efflux protein OprB [Acinetobacter baumannii 6014059] Length = 440 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/433 (23%), Positives = 207/433 (47%), Gaps = 23/433 (5%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 +P FS +S +I + K E +D L ++++I+L N + AT I ++ Sbjct: 12 IPQNFSQNHSGKMIAEKSYK--EFISDPKLLQVIEISLNNNRDLRTATLNIERVQQEYQI 69 Query: 92 VRADLFPS------SYASISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANL 142 + P+ + +S PN + T G + +++D +G+ +++ +++L N Sbjct: 70 TKNSQLPTIGVTGNAVRQVSPSINPNNPVSTFQVGLGMTAYELDFWGRVQNLKDAALNNY 129 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + + + ++ +IS + +++ + +++A Q L L+ +F G S+ Sbjct: 130 LATQSAKEAVQIGLISNITQVWLNYAFAQANLNLAEQTLKAQVDAYNLNKKRFDVGIDSE 189 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL---HYMQKQSNNFQPNL 259 + L + + +++ +D+ T + + + + L G+P + L H +Q + F+ N Sbjct: 190 VPLKQAQISVETARNDVATYKTQIQQAKNLLDLLAGHPVPQNLLPDHAIQNIT--FEKNF 247 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NS 316 G+P+DL+ +RPD++ E +L + A IG AK+ ++P++SL GS + Sbjct: 248 AA----GLPSDLLNHRPDLKAAEYELRVAGANIGAAKARMFPTISLTGSTGYASSELKDL 303 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F N WS GP + LPIFD G K+NI+ AE+ + +++ + +A +EV +AL + Sbjct: 304 FKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAETDQKIALAKYEKAIQSAFREVNDALATH 363 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 + + + V + LSM Y+ G S +LD +R+ + L ++ Sbjct: 364 AHIGERLDAQRRLVSATAATYKLSMARYKAGVDSYFTVLDAQRSAYAAQQGLLALEQIKL 423 Query: 437 KSYVDLYIAIGSG 449 + +++Y +G G Sbjct: 424 NNQIEIYKVLGGG 436 >gi|124266060|ref|YP_001020064.1| hypothetical protein Mpe_A0867 [Methylibium petroleiphilum PM1] gi|124258835|gb|ABM93829.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 489 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 114/437 (26%), Positives = 204/437 (46%), Gaps = 32/437 (7%) Query: 5 RAIFS-LFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTL---KWWESFN 57 RA+ + LF L LAGC P +P+ P F G+ + D WW++F Sbjct: 13 RAVLAPLFAALVLAGCATAPAIDPAALPVAPVAFKEGDGRWTTAAPADAQPRGTWWKAFA 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHR 107 D +L++LV+ A Q N +I A R+ A+ + + AD P + A R Sbjct: 73 DPTLDELVERAGQANNSIQTAAARLAQARALVRAADADRAPQVGVGAGVTRGTEAGAGPR 132 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYI 165 + T +T +++DLFG R S A LD S A + +L V + + +Y+ Sbjct: 133 PGTLISTGAT----LGYEVDLFG-RLAGASRAAALDARSREALLQSTRLLVQADVAQTYL 187 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R E ++ + Y+ + L +F G ++L + ++ ++ S ES+ L++ Sbjct: 188 ALRALDEESALVRDTVTAYRDTLSLIERRFNAGDIAELDVARVRTQVASTESEALALDRR 247 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ L+G A++F H +++ L + I G+P+ L+ RPD+ ++ + Sbjct: 248 RAELEHALAVLVGAAASDF-HV---DIADWRSALPV-IPAGVPSTLLARRPDVSAAQQAM 302 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A++G+AK+ +P+LSL S + + F W G L LP+FD G+ ++ Sbjct: 303 LAAQARVGVAKAAWFPNLSLTASGGVASPELGDLFQWSARSWGIGALLSLPLFDGGRREA 362 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ A + ++E VL A ++VE+ L+++ + AV ++ LS Sbjct: 363 GVQNASAELDAALAGYREQVLVAFRDVEDQLSALRYLADQDSAQARAVAAASRATVLSSS 422 Query: 403 NYRQGRYSLLDILDIER 419 YR G S LD+LD +R Sbjct: 423 RYRNGLVSQLDLLDAQR 439 >gi|295700337|ref|YP_003608230.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295439550|gb|ADG18719.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 470 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/470 (23%), Positives = 212/470 (45%), Gaps = 37/470 (7%) Query: 3 ILRAIFSLFIVLLA--GCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESF 56 +LR + + + LA C P Y +P P+ T +S + +T++ WW+ F Sbjct: 4 VLRGLGATAMCALALSACVDVRMPAYQRPDTPV-KTSWSDRQGAPVSAAETIERDWWKGF 62 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 D L+ L+ A+ N I RI A I A P+ F T + Sbjct: 63 QDPYLDTLIDKAIDGNFDIRVLAARIEVAHTQISEAGAAALPTVDLGAGADF-----TKT 117 Query: 117 TGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 TGQ L +W ID++G+ + +++ A + A L +++ + +Y Sbjct: 118 TGQPLTRTYNVALQVNWDIDIWGKVEKGVQAQKAEFHATEADWRAGYLELVANVASTYFQ 177 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 F ++I+ + + K+ + + + G + +++ +AEI + +D+ L +S Sbjct: 178 ILQFDDQIAQQQKTIATNKQILTIYEGQARNGIVPQTQVLRQQAEINRLTNDLYDLRRSR 237 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 ++ + + TLLG PA EF H Q + Q + +P + G+PA L+ RPD+ E ++ Sbjct: 238 AVSDNALCTLLGVPAGEF-HVPQ---GHLQERVKLPGVPDGLPAQLLSRRPDVVAAEFRV 293 Query: 286 ADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKI 340 ++ +G +K PS+ L G+ ++ + + +FG P + P+FD G + Sbjct: 294 LEAYDLVGQSKLAQLPSIGLTAQGGTASVALNQLLKSF----TFGLMPSINFPLFDPG-V 348 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +++++ +E+ ++ ++ V+ A +EVENAL +++ K +LQ V + Sbjct: 349 RAHVKVSEAQSKVAEQQYRVAVMGAFEEVENALVNLSAHKAQHEELQQQVARLQIVADQI 408 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L++ + ER + + L + + V LY A+G G+ Sbjct: 409 QSQLHLGVVSQLEVFEDERTLLQAQQALLENHQLILSDTVTLYKALGGGW 458 >gi|226952880|ref|ZP_03823344.1| outer membrane protein precursor [Acinetobacter sp. ATCC 27244] gi|226836391|gb|EEH68774.1| outer membrane protein precursor [Acinetobacter sp. ATCC 27244] Length = 462 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 111/450 (24%), Positives = 202/450 (44%), Gaps = 26/450 (5%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LAGC+ V Y P + + P QF K T +WW FND LN+LV L +N Sbjct: 18 LAGCSAVVKTPYNAPTVQV-PQQFQYDAQKEQNVKLTDQWWTLFNDAQLNQLVDQVLAKN 76 Query: 73 LTILQATERINAAK--ENILSVRADLFPSSYASISHRF-IPNLKTNSTG---QLDSDWKI 126 ++ A + A+ + R L SS S H + + + N G + +++ Sbjct: 77 SDLIVAGITLKQARLQAGLAENRQGLRTSSSVSTGHNYDLRSGDGNDRGLSTSVGVSYEL 136 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ E+S ++ + ++++ Y + ER + Q L + Sbjct: 137 DLFGKLANQTEASRWEALASEQDLQATAQSLVATTAKLYWQLGYLNERYNTIQQNLASTQ 196 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 K EL ++ GA S L L + E ++S ++ + +E+ I+ LL P + Sbjct: 197 KIYELVQSQYRAGAVSGLDLTQAEQSVQSQKASLSQIEQQRVEARTAIAVLLHQPVQQL- 255 Query: 246 HYMQKQSNNFQPNLYIP------INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 N Q +P I +G+PA+++ RPD++ E +L ++A K+ Sbjct: 256 --------NIQEPAQLPQSALPNIAVGLPAEILSRRPDLQASELRLRKTLANKDATKASY 307 Query: 300 YPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 YPS++L G++ + + + N + G L LP +K ++ ++ ++ + + Sbjct: 308 YPSINLTGNLGASSTSLTQLLQNPALTLGASLSLPFLQYNDMKKDLAISDLEYEKAIVQY 367 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T+ A +VENAL++ + + V Q +EL K+ L+ + YR G +L ++LD + Sbjct: 368 RQTLYQAFADVENALSNRTQLDQQVQLQQRNLELADKTERLTEVRYRNGAIALKNLLDAQ 427 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 T + L K+ +YV L A+G Sbjct: 428 ATTRNARLSLVETKQNQYNAYVTLMQALGG 457 >gi|313157656|gb|EFR57067.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Alistipes sp. HGB5] Length = 457 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 201/464 (43%), Gaps = 40/464 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I L + GC + YT+P + + + + + I + W E F+D L L++ Sbjct: 5 IIILAAAAMTGCGIYKPYTRPEVKT-DGLYGTAETADTMTIGNIGWEEMFSDPYLQTLIR 63 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRF-IPNLK 113 L+ N + A R+ A+ + S R PS +A+ S + IP Sbjct: 64 QGLENNTDLQSAQWRVKEAEATLKSARLAYLPSFNFAPQGNLSSFDWATPSKTYNIP--- 120 Query: 114 TNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARH 169 + + W+ID+F + ++ + YAQ K +IS + Y Sbjct: 121 ------VTASWQIDIF---NGLTNAKRKAKALYAQSREYEQAVKTQLISGIANLYYTLLM 171 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + Q +++++ G ++ ++ + E SIE+ + L+ RM Sbjct: 172 LDGQYEVTEQTAVKWRESVRTMRAMKEAGMANEAAVAQYEGTCLSIEASLHDLQYQIRMA 231 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +++ TLL E H +++ Q L + +G+P ++ NRPDIR E L S Sbjct: 232 ENSLCTLLA----EGPHQIERGRLEGQ-RLPDDLTVGVPVQMLSNRPDIRSAEYSLMQSY 286 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+S LYP+++L+G++ T+++ PG WS L PIF+ ++ ++ Sbjct: 287 YATSEARSALYPTITLSGTLGWTNNSGMGIKDPG-KILWSAAASLLQPIFNANANRARVK 345 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ +E + +Q+ +LNA EV NALT + +E ++++ + + + Sbjct: 346 IAKAQQEETKLAFQQALLNAGAEVNNALTQCQSARAKADLRVQQIEALERAVESTELLMK 405 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L +++ ++ + + V+LY A+G G Sbjct: 406 HSSTTYLEVLTAQQSLLSAQLSQIADRFDEIQGVVNLYQALGGG 449 >gi|264679640|ref|YP_003279547.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262210153|gb|ACY34251.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 527 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 196/399 (49%), Gaps = 45/399 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 +WW + D++L++L + A N + QA R+ +A+ + S RA P+ S R + Sbjct: 101 QWWTVYGDSTLDELQQAAAAGNPNVEQAVARLRSAQAAVASSRAAQLPTLSTTGSGSRAL 160 Query: 110 PNLKT--NSTGQ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 T N+ G+ L + W++DL+G+ +++S A+ ++ + Sbjct: 161 TGGGTYSNTNGENVARSGSINNNFSLGLSASWELDLWGKLSGAVDASRASAQASADDLAA 220 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L+ + + +Y R + ++ + L+ Y+++++L+ ++ G S + + +++ Sbjct: 221 ARLSAQASVAQTYFSLRAAEAQMKYLQESLEAYEQSLKLTQNRYQAGVVSSADVAQAQSQ 280 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP--- 268 KS ++ + + H ++ LLG F + ++P +P Sbjct: 281 YKSTQASLLEARITRAQYEHALAALLGKAPANF---------SLPVTGHLPTPPAVPEML 331 Query: 269 -ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNT 322 + L+ RPDI E+++A + A+IG+A++ +PSL+L+ S + NS N Sbjct: 332 ASTLLERRPDIAAAERRVAMANAQIGVARAAYFPSLTLSASAG--YRNSVLSDLLNAPNL 389 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINED 379 WS GP L + +FD G + + A ++ T+++TVL A++EVE+ A ++ ++ Sbjct: 390 FWSLGPALAMSLFDGGARSAAVESARATLDLNAATYKQTVLTALQEVEDNLVAAVNLAQE 449 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++ T+ A+ +KS++++ Y+ G + L++L + Sbjct: 450 EQVQTE---ALAAAQKSLTVANNQYQAGIVAYLNVLSAQ 485 >gi|167892130|ref|ZP_02479532.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei 7894] Length = 503 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|167736430|ref|ZP_02409204.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei 14] gi|167900641|ref|ZP_02487846.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei NCTC 13177] Length = 500 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|154492371|ref|ZP_02031997.1| hypothetical protein PARMER_02005 [Parabacteroides merdae ATCC 43184] gi|154087596|gb|EDN86641.1| hypothetical protein PARMER_02005 [Parabacteroides merdae ATCC 43184] Length = 453 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 103/459 (22%), Positives = 209/459 (45%), Gaps = 29/459 (6%) Query: 7 IFSLFIVLLAGCTV----GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 + + LL+ C + P T P L + ++ ++ N N++ W E F D L Sbjct: 6 VLTTATALLSSCGIYTKYQPAETTPD-NLYGEEVAVDDTTNFGNVN---WRELFTDPQLQ 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTG 118 L++ LQ N + A +I A+ ++S + PS +IS T Sbjct: 62 ALIEQGLQNNTDLRSAQLQIEEAEAALMSAKLAFLPSFALSPQGTISSFDGGKATKTYTL 121 Query: 119 QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFKERI 174 + + W++D+FG+ R+ + L YAQ + V ++LI Y E++ Sbjct: 122 PVTASWELDIFGRLRNAKQQAKAL---YAQSKDYQQAVRTQLIAGIANVYYTLLMLDEQL 178 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +I+ Q + +K+ + + G ++ + ++EA S+++ I L++ ++++ Sbjct: 179 AISQQTEEAWKETVASTRALMDAGLANEAATSQMEAAYYSVQTSILDLKEQINQVENSLA 238 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL T + K ++ P + +G+P ++ NRPD+R E+ L + Sbjct: 239 LLLA--ETPRRYERGKLADQRLPE---DVAVGVPMQMLSNRPDVRAAERSLEQAFYATNQ 293 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ YPS+ L+GS T+ PG + G L P+F+KG+I + R A++ Sbjct: 294 ARAAFYPSIVLSGSAGWTNSAGSMIVNPGKFLASAVG-SLTQPLFNKGQIMAQYRIAKAQ 352 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E +++Q+ +LNA EV +AL + K + ++ +K++ + + G + Sbjct: 353 QEEASLSFQQALLNAGSEVNDALVACQTSKAKTLLFEKQIQSLEKALESTSLLMEHGTTT 412 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + + +S ++LY A+G G Sbjct: 413 YLEVLTARQSLLSAQLSQTANRFTEIQSVINLYQALGGG 451 >gi|226940215|ref|YP_002795288.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] gi|226715141|gb|ACO74279.1| RND efflux system, outer membrane lipoprotein, NodT family precursor [Laribacter hongkongensis HLHK9] Length = 462 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 111/480 (23%), Positives = 222/480 (46%), Gaps = 59/480 (12%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS-IGNSKNLINIDTLK---WWESF 56 + + RA + LL C VGP+Y P P LP ++ G + D L+ WW F Sbjct: 3 IGMQRAGLAGMACLLGACAVGPDYV-PLRPGLPAHYAGAGQWVAVSATDPLERGDWWRVF 61 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPN---- 111 D L++L++ Q+ I QA + AA+ + +A +PS+ + + R + Sbjct: 62 GDAQLDRLMQQMATQSPAIAQAEAQYRAAEAELRLAQAAFWPSAEVTAARLRGVSQPGTA 121 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI--DAR 168 T +T + W+ D++G RR +ES A +++ A ++ A+L+ +L +Y+ Sbjct: 122 AATQATVTGTASWEADVWGSVRRSVESGQAQAEASAALLEAARLSAQVQLANAYLLWVVA 181 Query: 169 HFKER-ISIAHQILD--------------LYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 F++R + ++ Q L+ ++EL+ +Q T++ + + + + Sbjct: 182 SFQQRQLQVSEQALEQALRIARNQYAAGTAAAADVELA---VSQWETARAARLDKQLTVA 238 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 +E + T FR+ + + L P++ + ++ G+P+ L+ Sbjct: 239 QLEHALATASGVFRLELVLPAAL--------------------PDVPV-LDAGVPSTLLT 277 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-----LTHDNSFPGYNTHWSFGP 328 RPDIR EK +A + A+IG+A++ +PSL+LN S+ H + P N WS GP Sbjct: 278 RRPDIRAAEKNVAAANARIGVAQAAFFPSLTLNASVGYRGSSFAHLLTVP--NRIWSIGP 335 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 ++ + D G ++ + A ++ Q +Q+ VL A + VE+ L++ + + Q Sbjct: 336 EVLATLLDGGARRAQVDVASANYQGAVAAYQQMVLAAFQAVEDNLSAQAILAEEENRQQA 395 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A+ +++ ++ Y+ G L +L+ + + E L ++ + ++ V L ++G Sbjct: 396 ALNAARRAEQIAGNQYQAGTVGYLTVLNAQNQRIQAENALWNSRGRRYQATVGLIASVGG 455 >gi|170735509|ref|YP_001774623.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169821547|gb|ACA96128.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 478 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 204/459 (44%), Gaps = 38/459 (8%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-FNDTSLNKLVKIALQQNLTIL 76 C++ P+ P +P+ F + +L W + F D L +LV AL NL I Sbjct: 16 CSIAPQPLTP-VPVGRDGFRHADPATDTRAPSLAAWPAWFGDPQLGRLVDAALAHNLDIR 74 Query: 77 QATERINAAKENILSVR-ADLFPSSYASISHRFIPNL-KTNSTGQLD------------- 121 A R++ A+ +L VR A L P+ R P+ +T +G +D Sbjct: 75 AAAARVDQAQA-LLGVREAALAPTV------RVDPSFSRTRVSGTVDNALPKRTMHNWSV 127 Query: 122 ---SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + +++DL+G+ R + N+ A A D +L V +++ Y+ R+ + + Sbjct: 128 PVAASYEVDLWGRLRGDADVGEQNVLQAAADRDAVRLRVATEVAVDYLTLRYVDDDLVTL 187 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN-VHNISTL 236 + + L + +E+ + GA S L ++ A++ + +D+ + R N V ++ L Sbjct: 188 VRAIGLRRTALEVIAARVRAGAASDLDGLRASADLDTAHADLAE-SRRLRENLVDALAVL 246 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G T F P + G+P+ L+ RPD+ ++ + ++GIA+ Sbjct: 247 TGVSPTAF-----DVDTGAVPVQVPEVPAGLPSALLAQRPDVFAAARRADAASLELGIAR 301 Query: 297 SDLYPSLSL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + P+L+L +G A SF N+ WS G + L +FD GK + + A + Sbjct: 302 TAWLPTLTLTADGGFATRDLRSFLDRNSSLWSLGANVALTLFDGGKRDAAVAAARAGTDV 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ T + A+++V++AL I K+ + + A + LS+ Y G S L+ Sbjct: 362 ADADYRATAIGALRDVQDALNDIAAQKERIVRYDSAARATDAAARLSLSRYAHGYVSYLE 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++D +R L +++ LA + V L A+G G+ P Sbjct: 422 VIDADRDALNARRQLIHSRQALAIATVSLVRALGGGWTP 460 >gi|170731424|ref|YP_001763371.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169814666|gb|ACA89249.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 523 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 110/474 (23%), Positives = 208/474 (43%), Gaps = 47/474 (9%) Query: 13 VLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 VLLAGC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 23 VLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGAWWTVYNDPQLDALIG 80 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNL------------ 112 N TI Q+ A+ + RA FP+ AS S P Sbjct: 81 RLNASNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRARTPRTSLSSGSSSNFGS 140 Query: 113 -------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y Sbjct: 141 GSTGSINNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTY 199 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + + Y+++++L+ ++ QG ++ +++ + +++S ++ Sbjct: 200 FQLRTSDALQKLLDDTVKSYERSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAQIDNGV 259 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI---PIN-IGIPADLIRNRPDIRY 280 + H I+TL+G PA+ F + PN P+ + +P+ ++ RPDI Sbjct: 260 ARAQYEHAIATLIGEPASTF---------SLPPNPLAAEPPVTPVDVPSAILERRPDIAA 310 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDK 337 E++ A + +IG+A S +P+L+L+ + F W+ GP+L +FD Sbjct: 311 AERRAAAANEQIGVAISAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATLFDA 370 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + A ++ + ++ VL A ++VE+ L S + + + AV+ + ++ Sbjct: 371 GLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQRQAVDSAEHAL 430 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Y+ G + L++L + + L+ Q S V L A+G G+N Sbjct: 431 AIVTNQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWN 484 >gi|172065483|ref|YP_001816195.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997725|gb|ACB68642.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 497 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 207/460 (45%), Gaps = 29/460 (6%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +V L+GC ++ P P P+ P F + +W F D L L+ AL Sbjct: 27 MVSLSGCLSLAPSDEHPAAPI-PASFPDPAADETPAAQVPEWQAYFVDARLRALIGQALA 85 Query: 71 QNLTILQATERINAAKENILSVR-ADLFPSSYASISH-RF-IPN---LKTNSTGQL---- 120 N + A R A + +R AD +P+ ++ RF P GQ+ Sbjct: 86 NNRDLRAAVAR-GAQARAVYGIRSADQWPTVDGGAAYARFRTPGGFLTPAPMIGQVYEIQ 144 Query: 121 --DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++ W++DL+G+ R++ E++L ++ A L++++ + +Y+ ERI++ Sbjct: 145 LAETQWELDLWGRVRNMKEAALERYLASDAARQAVTLSIVTGVADAYLTLCEIDERIALT 204 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 +D ++++ + L+ GA S+L L + E ++ +S L+++ ++ L+ Sbjct: 205 RATIDTRRESLRIFRLRHAAGAISRLDLTQSEILLQQAQSLGTQLQQARASAADALALLV 264 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G + P L G+P+ L+ +RPD+ E +L + A IG A++ Sbjct: 265 GAQPDLPDAPLALDDGAVTPTL----AAGLPSSLLTHRPDVIAAEHELRATHANIGAARA 320 Query: 298 DLYPSLSLNGSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +P ++L SI HD G WS P + LP+ D G+ +SN+ A + E Sbjct: 321 AFFPRIALTSSIGSGSSALHDLLSSGTGA-WSLIPNVTLPLIDGGRNRSNLALARAQRDE 379 Query: 354 QYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 +++T+ A ++V +AL + + D+ + + A + + L+ + Y G Sbjct: 380 ALAQYEKTLQRAFRDVSDALAARHWLADQVAIERATLASQAERA--RLAKLRYDSGATRF 437 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++LD +R E L + +R L S + LY A+G G Sbjct: 438 LEVLDAQRDLMNAEQQLVMTRRALLSSRIALYGALGGGMT 477 >gi|167813504|ref|ZP_02445184.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei 91] Length = 493 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|167843659|ref|ZP_02469167.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei B7210] Length = 505 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLAALSGQRMVSSVGLVKALGGGWD 478 >gi|167822046|ref|ZP_02453517.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei 9] Length = 501 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLAALSGQRMVSSVGLVKALGGGWD 478 >gi|113868646|ref|YP_727135.1| outer membrane protein (porin) [Ralstonia eutropha H16] gi|113527422|emb|CAJ93767.1| outer membrane protein (porin) [Ralstonia eutropha H16] Length = 487 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 194/439 (44%), Gaps = 17/439 (3%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTILQAT 79 P Y +P P +++ S + +T++ WW F D LN+L+ AL N I Sbjct: 42 PVYQRPETPA-KAEWTRQESITVSPAETVQPNWWLGFKDPYLNRLIDQALYGNYDIKVLA 100 Query: 80 ERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS----DWKIDLFGQ-RRH 134 RI A I RA P F + ST ++ +W ID++G+ + Sbjct: 101 ARIRVANAQIGEARAGGLPVIDIGAGASFEKSTGQKSTWTYNAGAQLNWDIDIWGKVEKG 160 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 +++ A + A L ++S + +Y F E+I + + + + Sbjct: 161 VQAQTAEFRATEADWRAGYLTLVSNVSTTYFQILQFDEQIEQQARTVAKNGQILSTYQAM 220 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 + G K+ +++ +AEI + D+ L +S + + ++TL+G PA + + Sbjct: 221 YQNGLVPKIRVMQQQAEINRLNKDLLELRRSRDVAENALATLVGVPAGNLKVPAGRLQDR 280 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIAL 311 QP + G+P+ L+ RPD+ E ++ + +G A+ P++SL G+ + Sbjct: 281 VQPPA---VPAGLPSQLLARRPDVVAAEYRVLAAYNIVGQARLAQLPTISLTARGGTASF 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + + + F P + LP+ D +++ ++ E+ + TV+ A +EVE+ Sbjct: 338 ALSDLLKSFT--FGFMPSINLPMLDP-SVRARVKTTEAQVGVAENEYGRTVMTAFEEVES 394 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 AL +++ KK +LQ VE + + ++G S L++ + ER+ ++ L Sbjct: 395 ALVNVDAHKKQRIELQQQVEQLRVVSAQIEAQLKEGVVSQLEVFETERSLLAAQLQLLAV 454 Query: 432 KRQLAKSYVDLYIAIGSGY 450 +Q+ V LY A+G G+ Sbjct: 455 HQQILADTVTLYKALGGGW 473 >gi|188576389|ref|YP_001913318.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520841|gb|ACD58786.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 482 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 109/478 (22%), Positives = 196/478 (41%), Gaps = 50/478 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLL---------------------PTQFSIGNSKNLINIDT 49 V LA C VGP++ +P P QF G Sbjct: 1 MAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFEPGQEV------P 54 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHR 107 WW +F+ LN +V+ AL+ N + A + A++ + + R P + + S + Sbjct: 55 AAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQ 114 Query: 108 ---FIPNLKTN-------STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 +P T QL + +D+FG RR +E++ A + Q D A L++ Sbjct: 115 RNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSL 174 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I + ++ A + + ++ L+ + T GA ++ + + Sbjct: 175 TANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRTALAQAQ 234 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + +P LEK ++ L G +E ++ + L +P + + +P+ L+ Sbjct: 235 ATVPPLEKQLEQQRTLLAILGGQVPSE----AADEAFTLE-TLQLPAQLPLSLPSQLVEG 289 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDIR E + + A IG+A + PS++L+ G A F NT WS L Sbjct: 290 RPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAAIFGRMFAAGNTQWSLAGSLL 349 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + R AE+ + ++ VLNA EV NALT++ D + + A Sbjct: 350 QPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRACADAQA 409 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +++++ G + D+L ++A + A+ V LY A+G G Sbjct: 410 LAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 467 >gi|50085972|ref|YP_047482.1| major intrinsic multiple antibiotic resistance efflux outer membrane protein precursor [Acinetobacter sp. ADP1] gi|49531948|emb|CAG69660.1| outer membrane protein (AdeC-like) [Acinetobacter sp. ADP1] Length = 484 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 104/442 (23%), Positives = 212/442 (47%), Gaps = 21/442 (4%) Query: 21 GPE-YTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 GPE K +P T + G S I + + F+D L +++++AL N + A Sbjct: 30 GPEPVVKADIPTSYTYNASGQS-----IAEQGYKDFFSDPRLLQVIELALNNNRDLRTAA 84 Query: 80 ERINAAKENILSVRADLFPSSYAS------ISHRFIPN--LKTNSTGQLDSDWKIDLFGQ 131 I A++ + P+ AS +S PN T G + +++D +G+ Sbjct: 85 LNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQVGLGVTAYELDFWGR 144 Query: 132 RRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 R + +++L N + + D +++++S++ +++ + +A Q L + L Sbjct: 145 VRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLKLADQTLKAQLDSYNL 204 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + +F G S++ L + + +++ +D+ + + ++ L+G + L Q Sbjct: 205 NKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIVQAQNLLNLLVGQSVPQNLLPNQP 264 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 + + N++ + G+P+DL+ NRPD++ E +L+ + A IG AK+ L+P++SL GS Sbjct: 265 VKSITRQNVF---STGLPSDLLNNRPDVKSAEYQLSAAGANIGAAKAALFPTISLTGSAG 321 Query: 311 LTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 + F WS GP L LPIFD G ++NI+ +E+ + +++++ +A + Sbjct: 322 YASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKISETDQKIALSNYEKSIQSAFR 381 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 EV +AL + ++ + V+ + SLS +R G + L +LD +R + E Sbjct: 382 EVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDNYLTVLDAQRTSYSAEQG 441 Query: 428 LSIAKRQLAKSYVDLYIAIGSG 449 L + ++ + ++LY +G G Sbjct: 442 LLLLEQANLNNQIELYKTLGGG 463 >gi|167916901|ref|ZP_02503992.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei BCC215] Length = 492 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|332876757|ref|ZP_08444515.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685316|gb|EGJ58155.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 456 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 110/457 (24%), Positives = 213/457 (46%), Gaps = 31/457 (6%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 LL+ C + Y +P + N S + + + + W E F D L L++ L Sbjct: 12 ALLSSCGLYKSYERPADIQTDGLYRSDNTQSGDSLGLASFAWREIFTDPQLQTLIERGLA 71 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYA---SISHRFIPNLKTNSTGQLDSDWKI 126 QN + A +I ++ ++ + + PS ++A S++ T + + W+I Sbjct: 72 QNTNLRSAQLQIEQSEASLKAAKWAYIPSLAFAPQGSLAGVDWGKATQTYTIPVSASWQI 131 Query: 127 DLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 D+FG ++ ++ L N AY Q ++L I+ + Y K++++++ + Sbjct: 132 DIFGSLHNAKKRAQAQLEN-SQAYKQAVQSQL--IAAIANYYYSLAMLKDQLAVSQETEK 188 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 L+K+N+E + G ++ ++ + EA SI + I L++ + S LLG Sbjct: 189 LWKENVETTRALMNAGQSNMAAVSQTEANYYSICTQITDLKQQISDLENEFSALLG---- 244 Query: 243 EFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 QK + N +P ++ GIPA + NRPD++ E +LA + +++ Y Sbjct: 245 ---EAPQKYAIGSMNNWKVPARMSAGIPAAALANRPDVKQAETQLAVAYYATNESRAAFY 301 Query: 301 PSLSLNGSIALTHD-NSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P L+L+G+I T+D + P W + L PIF GK+++ + +++ ++ ++ Sbjct: 302 PGLNLSGAIGWTNDLGTLPVNPGKWIWNAMASLTQPIFQNGKLRAQYKISKAQQEQAKLS 361 Query: 358 WQETVLNAIKEVENALTSI---NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +Q+T+L+A EV ALT I E + TK ++E KS M+N + L + Sbjct: 362 FQQTLLDAGTEVNAALTKIQATGEKDGLYTKQIASLETAVKSTQALMMN---SSTNYLQV 418 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L ++ ++ K ++ ++LY A+G GY+ Sbjct: 419 LTAQQTLLTAQMSQISNKFSQIQAAIELYQALGGGYD 455 >gi|223940328|ref|ZP_03632184.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] gi|223890991|gb|EEF57496.1| RND efflux system, outer membrane lipoprotein, NodT family [bacterium Ellin514] Length = 508 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 118/477 (24%), Positives = 221/477 (46%), Gaps = 42/477 (8%) Query: 7 IFSLFIVLL--AGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTS 60 + SL +V L +GC P+Y +P + P F ++ + KWWE FND Sbjct: 22 LVSLLMVTLWWSGCNFAPKYNRPSVQT-PAAFKEMEGWARAQPKDHEIRGKWWEVFNDPE 80 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY-----------ASISHRFI 109 LN L + N + A AA+ + R+ FP++ A+ + F Sbjct: 81 LNALEEQVTISNQNVAAAVANFAAARAIVRQARSQYFPTATMGPSVTRSKTSATGTTSFA 140 Query: 110 PNLKTN-STGQ--------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 + TN S+G+ D+ W D +G R +++ +A S+ A ++ KL Sbjct: 141 SSFSTNGSSGRAFTLYALPFDATWDPDFWGGIRNTVKADIAAAQSSAAILENVKLTNQVA 200 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + R I + ++K ++L+ FT G S +++ E ++++ + Sbjct: 201 MAAVYFELRGQDALKEILDSAVVSFQKTLDLTKALFTTGINSDVNVALAETQLQTTVAQA 260 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPD 277 +L H I+ L+G PA+ F S +P P I +G+P+ L+ RPD Sbjct: 261 TSLGVQRAQFEHAIALLIGKPASTF-------SVPARPLKASPPAIPVGVPSQLLERRPD 313 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPI 334 I E+ +A + A+IG+A++ +P+++L S +T N G + WS G + + Sbjct: 314 IAAAERIVAQANAQIGVARAAYFPTITLTASSGFQSVTTANLLTGPSAVWSIGAAMAETL 373 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + ++A ++ +++TVL A VE+ L ++ + + + + AV+ + Sbjct: 374 FDAGRRAAVTQQAWATYNLTVADYRQTVLTAFVNVEDNLAALRILSQQLQQQEVAVKSAE 433 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATA-KVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S++L++ Y+ G S L++L + A E ++I +Q+ S V L A+G G+ Sbjct: 434 RSLALTIYGYKTGINSYLNVLTAQTALLNNQETAMTIRIQQMTAS-VQLINALGGGW 489 >gi|162149612|ref|YP_001604073.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209544841|ref|YP_002277070.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161788189|emb|CAP57794.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532518|gb|ACI52455.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 531 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 104/466 (22%), Positives = 205/466 (43%), Gaps = 34/466 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVK 66 L + L+ C + P Y P + + DT WW +D L+ L Sbjct: 17 LSLAALSACDLAPTYHPPTYVVPASWHGQAPFATATPADTQLPSNWWTMLHDPQLDALED 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRFIPNLKTNST 117 A N + A ER A+ ++ RADL P + S F T +T Sbjct: 77 KATAANADLQAAAERFVQARAMVMQARADLLPHFGLAFGASDNKQSADRLFRYKGATTAT 136 Query: 118 ----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G L S W+ D + + R + + + A A+L++ ++L Y+ R + Sbjct: 137 DEFYGGLAS-WEPDFWSEIRNQVRMAKYSAQEKAADFAAARLSLQAELANDYVALRGYDA 195 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +I + + Y++ + ++ + A KL L + + + ++ + + H Sbjct: 196 QDAIYRKSIAYYERAVSVTQTQLANQAAPKLDLARAQNRLYVTQAAEMDILAEREVTEHA 255 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+ L + F H + F I +G+P+DL++ RPDI E+++A + I Sbjct: 256 IAVLTNSAPSSF-HIAPVDTLTF---TRAAIPVGVPSDLLQRRPDIAAAERQMAQANRSI 311 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G++++ YP +SLN + N F N+ WS+G +PIF+ G ++ ++ + S Sbjct: 312 GVSRAAFYPHISLNANGGFDA-NGFDLANLANSMWSYGASASMPIFEGGLRRAALQASWS 370 Query: 350 SAQEQYITWQETVLNAIKEVENALTSIN----EDKKIVTKLQHAVELHKKSMSLSMINYR 405 + +E ++ +VL+A +EVE+ L+ + E+ ++ + A+++ +M+L Y+ Sbjct: 371 TYRETRDHYRSSVLSAFREVEDGLSRTDRLWAENDRLKAAVSAALDMQNMTMTL----YK 426 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + LD + + A ++ + + ++ V L A+G G+N Sbjct: 427 GGLSAYLDAIIAQEAALDAQISQVQVETRYVQAEVGLIRALGGGWN 472 >gi|134281354|ref|ZP_01768062.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|237814412|ref|YP_002898863.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei MSHR346] gi|134247021|gb|EBA47107.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|237505714|gb|ACQ98032.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei MSHR346] Length = 538 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|91778116|ref|YP_553324.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91690776|gb|ABE33974.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 497 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 109/435 (25%), Positives = 193/435 (44%), Gaps = 43/435 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDT 59 A+ +L VL+ GC VGP+Y +P + LP + + D WW +FND Sbjct: 12 ALLALSTVLMGGCMVGPDYHRPPVATPAMWKELPGWIEAQPAAEVPKGD---WWTAFNDP 68 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISHR 107 +N+L + N T+ Q A + R+ LFP SS ++S Sbjct: 69 LINELEPLVSVSNQTVRQDYANYQQALAEVRLARSALFPTIGINGSATRERSSTGNLSSS 128 Query: 108 FIPN-------LKTNSTGQLDSD--WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 + + N+ G L+++ W DL+G RR+IE + A ++ A + A L+ Sbjct: 129 VLAGGAGVGNFQRINNAGSLEANASWAPDLWGLVRRNIEQNAATAQASQATLANATLSEQ 188 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 L + ID R I + +D +++++ + + G LV + +++S +S Sbjct: 189 IALANAVIDLRVTDANIDLLTHTVDAFEQSLRVVADQDKAGTVPPSDLVSAQTQLESAQS 248 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRP 276 + L + VH I+ L+G E + +N P L +P+++ P+ L++ RP Sbjct: 249 SLIALGVARAQYVHAIAVLVGRNPEE----LDVPTNTTLPTLPSVPVSV--PSTLLQRRP 302 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYL 332 DI E+++A A IG+A + YP++SL+ T + G N WS G + Sbjct: 303 DIAAAERQMAAQNAAIGVAVAAYYPTISLSALDGFTQ-SPLAGLLHIANYVWSLGGQASE 361 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G+ + + A++S ++ TVL A + VEN L + + L+ AV Sbjct: 362 TLFDGGQRSAQVDAAKASYDAALANYRGTVLTAFQGVENDLAGLRILAQQAEVLERAVRD 421 Query: 393 HKKSMSLSMINYRQG 407 + ++ Y+ G Sbjct: 422 ATRGTEIARNEYQAG 436 >gi|254194671|ref|ZP_04901102.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|169651421|gb|EDS84114.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei S13] Length = 541 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|53717658|ref|YP_106644.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei K96243] gi|52208072|emb|CAH34002.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei K96243] Length = 551 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|212690734|ref|ZP_03298862.1| hypothetical protein BACDOR_00221 [Bacteroides dorei DSM 17855] gi|212666708|gb|EEB27280.1| hypothetical protein BACDOR_00221 [Bacteroides dorei DSM 17855] Length = 466 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 208/458 (45%), Gaps = 33/458 (7%) Query: 14 LLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 LL+GC + Y +P P+ N + N+ L W E F D L L Sbjct: 18 LLSGCHIYKSYDRPESIDATGIYRDPVAANDTLAAN--DTTNMGNLSWKEIFRDPKLQML 75 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ L N+ + A R+ AK + S R PS S++ N T Sbjct: 76 IEEGLANNVDMQAAILRVKEAKALLTSARLSYLPSLALAPQGSLTSVDKSTPVKNYTLPA 135 Query: 121 DSDWKIDLFGQ--RRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++DLFG+ H + L S AY Q ++L I + +Y ++S+ Sbjct: 136 SASWEVDLFGKLLNAHRGQKASYLQSKAYQQAVRSQL--IGGIANAYYSLLMLDRQVSVT 193 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + L K+ + G T++ ++ + + E+ + L++ R ++IS LL Sbjct: 194 EQNVALMKETVRTMEAMKEAGMTTEAAVAQSKGTYHQTEASLADLKRQVRETENSISVLL 253 Query: 238 G-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P +++Q + + +G+P L+ NRPD++ E LA + A+ Sbjct: 254 AKAPQNIDRGTLEEQV------MPADLAVGVPLQLLENRPDVKAAELALASAYYTTNQAR 307 Query: 297 SDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 S YPS+++ G++ T+ + S P W+ L PIF +GK+ +N++ +++ Sbjct: 308 SAFYPSVNITGTLGWTNGSNGTVISNPAV-MLWNAIGSLTQPIFQRGKLIANLKVSKAEE 366 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q + +Q+T+L A KEV +AL + K +++ Q V +K++ ++ ++ G+ + Sbjct: 367 QIAKMNYQQTILEAGKEVSDALFLYDTADKKLSEHQAQVSEMQKAVEMNNDLFQAGKATY 426 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+I+ +++ +++ Q ++ ++LY A+G G Sbjct: 427 LEIITAQQSLLSAQLNEVSDTFQRMQAVINLYSALGGG 464 >gi|167908862|ref|ZP_02495953.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei 112] Length = 498 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGTQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRTAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|71152257|sp|Q9KJC1|ARPC_PSEPU RecName: Full=Antibiotic efflux pump outer membrane protein ArpC; Flags: Precursor gi|8163737|gb|AAF73833.1|AF183959_4 outer membrane channel protein [Pseudomonas putida] Length = 484 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 32/473 (6%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S ++ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQAPEAPVAAQWPQGPAYSPTQSADVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NL 112 F+D +L +L++ +L N + A ++A + RADLFP S+ S S + +P N+ Sbjct: 60 FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM 119 Query: 113 -KTNSTGQLD--------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 +T +G S +++DLFG+ R + E +L S+ ++ +++ + Sbjct: 120 SQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + L Y+++ L+ G S L + + ++ Sbjct: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239 Query: 223 EKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ +V++++ LLG PA + ++ ++ + G+P+D+++ RPDI+ Sbjct: 240 QRLVAQDVNSLTVLLGTGIPA-DLAKPLELDADQL-----AEVPAGLPSDILQRRPDIQE 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS+SL GS++ + F G W F P++ LPIF+ Sbjct: 294 AEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNA 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +K+++ ++ +++T+ A +EV + L + ++ + + V+ ++ Sbjct: 354 GSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYY 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 414 RLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466 >gi|237709771|ref|ZP_04540252.1| outer membrane protein oprM [Bacteroides sp. 9_1_42FAA] gi|237725078|ref|ZP_04555559.1| outer membrane protein oprM [Bacteroides sp. D4] gi|265754402|ref|ZP_06089591.1| outer membrane protein oprM [Bacteroides sp. 3_1_33FAA] gi|229436344|gb|EEO46421.1| outer membrane protein oprM [Bacteroides dorei 5_1_36/D4] gi|229456407|gb|EEO62128.1| outer membrane protein oprM [Bacteroides sp. 9_1_42FAA] gi|263235111|gb|EEZ20666.1| outer membrane protein oprM [Bacteroides sp. 3_1_33FAA] Length = 461 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 208/458 (45%), Gaps = 33/458 (7%) Query: 14 LLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 LL+GC + Y +P P+ N + N+ L W E F D L L Sbjct: 13 LLSGCHIYKSYDRPESIDATGIYRDPVAANDTLAAN--DTTNMGNLSWKEIFRDPKLQML 70 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ L N+ + A R+ AK + S R PS S++ N T Sbjct: 71 IEEGLANNVDMQAAILRVKEAKALLTSARLSYLPSLALAPQGSLTSVDKSTPVKNYTLPA 130 Query: 121 DSDWKIDLFGQ--RRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W++DLFG+ H + L S AY Q ++L I + +Y ++S+ Sbjct: 131 SASWEVDLFGKLLNAHRGQKASYLQSKAYQQAVRSQL--IGGIANAYYSLLMLDRQVSVT 188 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q + L K+ + G T++ ++ + + E+ + L++ R ++IS LL Sbjct: 189 EQNVALMKETVRTMEAMKEAGMTTEAAVAQSKGTYHQTEASLADLKRQVRETENSISVLL 248 Query: 238 G-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P +++Q + + +G+P L+ NRPD++ E LA + A+ Sbjct: 249 AKAPQNIDRGTLEEQV------MPADLAVGVPLQLLENRPDVKAAELALASAYYTTNQAR 302 Query: 297 SDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 S YPS+++ G++ T+ + S P W+ L PIF +GK+ +N++ +++ Sbjct: 303 SAFYPSVNITGTLGWTNGSNGTVISNPAV-MLWNAIGSLTQPIFQRGKLIANLKVSKAEE 361 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q + +Q+T+L A KEV +AL + K +++ Q V +K++ ++ ++ G+ + Sbjct: 362 QIAKMNYQQTILEAGKEVSDALFLYDTADKKLSEHQAQVSEMQKAVEMNNDLFQAGKATY 421 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+I+ +++ +++ Q ++ ++LY A+G G Sbjct: 422 LEIITAQQSLLSAQLNEVSDTFQRMQAVINLYSALGGG 459 >gi|313105916|ref|ZP_07792178.1| hypothetical protein PA39016_000120003 [Pseudomonas aeruginosa 39016] gi|90569600|gb|ABD94671.1| putative outer membrane channel lipoprotein [Pseudomonas aeruginosa] gi|310878680|gb|EFQ37274.1| hypothetical protein PA39016_000120003 [Pseudomonas aeruginosa 39016] Length = 493 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/464 (23%), Positives = 219/464 (47%), Gaps = 30/464 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLIN---IDTLKWWESFNDTSLNKLVKIAL 69 L +GC P++ +P +L + F + + + TL WW+ F D LN LV+ + Sbjct: 15 LSSGCV--PKHIRPQSEVLRAEDFGLKKTNGKFSRTIWPTLDWWKVFGDKQLNLLVQEGI 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQL 120 + + A RI A SV ++L+PS S S+ R ++ Sbjct: 73 ANSSDLRAAEARIRQANAIAGSVESELWPSLNGTAEFSRSRTSLYGRGNGAWSKLYDAKI 132 Query: 121 DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S +++D++G+ R +++++ L S + +L++ ++ +YI+ ++I + Sbjct: 133 SSYFELDIWGKNRAALKAAIGRLKSKEIERYATQLSLAHSIVQAYINLDQLYSELAIQQE 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +L+ YK +EL+ ++ S +S+ + A I + ++I +L +S + + L+G Sbjct: 193 MLETYKSLLELTRQRYFADLDSLVSVKQALAAIPATRAEIASLRESLELTRNQFVMLVGK 252 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 L +++ S N+ +P N +PA+L+ +RPDI + + ++K++ Sbjct: 253 GPDRGLQ-IEEPSINYADITMVPDN--LPAELLGHRPDIVANRWMVEAKSYDVRVSKAEY 309 Query: 300 YPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 YP+++L+ G +L N + +S GP L LPIFD G++ SN+ A SS Sbjct: 310 YPNINLSSFIGVQSLGFSNLHKRNSYEFSVGPALSLPIFDAGRLDSNLADAISSYDLAVE 369 Query: 357 TWQETVLNAIKEVENALTSINEDK-KIVTKLQ-------HAVELHKKSMSLSMINYRQGR 408 + + A++++ + +TS+ K ++ +L+ A++ ++S L++ Y G Sbjct: 370 NYNAGLTGALQDLADQMTSLKWLKERLKERLKERPKEQGEALKTSQESADLALAQYGAGL 429 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S L ++ + ++ LS + Y L A+G GY+P Sbjct: 430 VSYLQVISTQSVVFSQKLLLSQLTSRGLSLYAQLNRALGGGYSP 473 >gi|126438870|ref|YP_001057075.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|126218363|gb|ABN81869.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 668] Length = 538 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLAALSGQRMVSSVGLVKALGGGWD 478 >gi|148549544|ref|YP_001269646.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|71153372|sp|Q9WWZ8|TTGC_PSEPU RecName: Full=Toluene efflux pump outer membrane protein ttgC; Flags: Precursor gi|5091481|gb|AAD39554.1| TtgC [Pseudomonas putida] gi|148513602|gb|ABQ80462.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] gi|313500389|gb|ADR61755.1| TtgC [Pseudomonas putida BIRD-1] Length = 484 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 32/473 (6%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S ++ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NL 112 F+D +L +L++ +L N + A ++A + RADLFP S+ S S + +P N+ Sbjct: 60 FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM 119 Query: 113 -KTNSTGQLD--------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 +T +G S +++DLFG+ R + E +L S+ ++ +++ + Sbjct: 120 SQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + L Y+++ L+ G S L + + ++ Sbjct: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239 Query: 223 EKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ +V++++ LLG PA + ++ ++ + G+P+D+++ RPDI+ Sbjct: 240 QRLVAQDVNSLTVLLGTGIPA-DLAKPLELDADQL-----AEVPAGLPSDILQRRPDIQE 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS+SL GS++ + F G W F P++ LPIF+ Sbjct: 294 AEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFAGGQGTWLFQPQINLPIFNA 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +K+++ ++ +++T+ A +EV + L + ++ + + V+ ++ Sbjct: 354 GSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYY 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 414 RLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466 >gi|299533217|ref|ZP_07046601.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298718747|gb|EFI59720.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 525 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 196/399 (49%), Gaps = 45/399 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 +WW + D++L+ L + A N + QA R+ +A+ + S RA P+ S R + Sbjct: 99 QWWTVYGDSTLDDLQQAAAAGNPGVEQAVARLRSAQAAVASSRAAQLPTLSTTGSGSRAL 158 Query: 110 PNLKT--NSTGQ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 T N+ G+ L + W++DL+G+ +++S A+ ++ + Sbjct: 159 TGGGTYSNTNGENVARSGSINNNFSLGLSASWELDLWGKLSGAVDASRASAQASADDLAA 218 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L+ + + +Y R + ++ + L+ Y+++++L+ ++ G S + + +++ Sbjct: 219 ARLSAQASVAQTYFSLRAAEAQMKYLQESLEAYEQSLKLTQNRYQAGVVSSADVAQAQSQ 278 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP--- 268 KS ++ + + H ++ LLG F + ++P +P Sbjct: 279 YKSTQASLLEARITRAQYEHALAALLGKAPANF---------SLPVTGHLPTPPAVPEML 329 Query: 269 -ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNT 322 + L+ RPDI E+++A + A+IG+A++ +PSL+L+ S + NS N Sbjct: 330 ASTLLERRPDIAAAERRVAMANAQIGVARAAYFPSLTLSASAG--YRNSVLSDLLNAPNL 387 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE-NALTSIN--ED 379 WS GP L + +FD G + + A ++ T+++TVL A++EVE N + ++N ++ Sbjct: 388 FWSLGPALAMSLFDGGARSAAVESARATLDLNAATYKQTVLTALQEVEGNLVAAVNLAQE 447 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++ T+ A+ +KS++++ Y+ G + L++L + Sbjct: 448 EQVQTE---ALAAAQKSLTVANNQYQAGIVAYLNVLSAQ 483 >gi|293395376|ref|ZP_06639660.1| outer membrane efflux protein [Serratia odorifera DSM 4582] gi|291422060|gb|EFE95305.1| outer membrane efflux protein [Serratia odorifera DSM 4582] Length = 445 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 173/348 (49%), Gaps = 9/348 (2%) Query: 111 NLKTNS--TGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDA 167 N++T S + + W++DLFG+ R S+ A+ +S A+ D ++ V ++ +++ A Sbjct: 71 NIRTGSRYSAGMSLQWELDLFGRLRSQSSAAQAHAESVQAEEDGVRVWVAAETTRAWLSA 130 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + +RI IA Q L L + +++ GA + +V+ + + +++P L+ + Sbjct: 131 CSYGQRIGIAQQTLALVVQEQQITEALHKSGAGAMPGVVRAQGLVYQTRTELPVLKAKRQ 190 Query: 228 MNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ L+G P++ + Q +P + G+ L+R RPD+R +++L Sbjct: 191 RVLAELAVLMGRLPSSPPEQALVCQKPPTLAYRGLPDSEGLA--LLRRRPDVREAQQQLT 248 Query: 287 DSVAKIGIAKSDLYPSLSLNGS-IALTHDNSFPGYN--THWSFGPKLYLPIFDKGKIKSN 343 + A I +A +DLYP +SL S ++ H G T WS GP + + ++ Sbjct: 249 AATANIRVATADLYPQISLGASMLSSAHQPEDWGKEGATVWSIGPLISWSFPNITAARAR 308 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I +A + + T+L A+KEV+ +LT + + LQ A E + ++ LS + Sbjct: 309 IAQAGAKESAALAHFDGTILTALKEVQVSLTGYDSALQQQKLLQQAAENSRHALRLSTLA 368 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G + LD LD +R V+ +L+ A +L + V L+ A+G G+ Sbjct: 369 YQDGATTALDYLDSQRNDVAVQSELARANTRLIDAQVTLFKALGGGWQ 416 >gi|53723920|ref|YP_104291.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|121599125|ref|YP_994784.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|124385770|ref|YP_001027853.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126449615|ref|YP_001082199.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|167000464|ref|ZP_02266278.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] gi|238562291|ref|ZP_00440677.2| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|254175061|ref|ZP_04881722.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254201368|ref|ZP_04907732.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|254206710|ref|ZP_04913061.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|254357373|ref|ZP_04973647.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|52427343|gb|AAU47936.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|121227935|gb|ABM50453.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|124293790|gb|ABN03059.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei NCTC 10229] gi|126242485|gb|ABO05578.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei NCTC 10247] gi|147747262|gb|EDK54338.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|147752252|gb|EDK59318.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|148026437|gb|EDK84522.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|160696106|gb|EDP86076.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|238522927|gb|EEP86369.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|243063654|gb|EES45840.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] Length = 538 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAETYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLAALSGQRMVSSVGLVKALGGGWD 478 >gi|186471742|ref|YP_001863060.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184198051|gb|ACC76014.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 493 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 212/465 (45%), Gaps = 43/465 (9%) Query: 18 CTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKI 67 CTVGP +++P P + S G ++L ++ WW SF +++ V Sbjct: 34 CTVGPNFSRPATPRVQRYDASDALGMASGGQPQSLSPAVQMRDDWWTSFGCRAIDMAVDE 93 Query: 68 ALQQNLTILQATERINAAKENILSVRADLF-PSSYA---SISHRFIP------------N 111 AL N+T L+ E E +L A +F P A + RF P N Sbjct: 94 ALTGNVT-LEHGEATLRRSEYLLRAGAGVFFPQVDARGDASRQRFSPLRTGVDAPASIFN 152 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L T S + +D++G +RR +E+ A ++ + L + + ++ + I + Sbjct: 153 LFTLSA---TVSYTLDIWGGERRQVEALAAQAEAQRYTLVATYLTLAANVVNAMIARAAY 209 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + I+ ++++L ++ + ++ + GA++ +++ L+ E+ ++E+ +P LE+ Sbjct: 210 SDEIAATREMVELVREQVHITQAQVAAGASAWSAVLSLQNELATLEASLPGLEQKRIETE 269 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H ++ L G ++ + P + +P + P+ L+R RPDI E L + A Sbjct: 270 HLLALLAGMYPEQWSGPAVSLAEIALPGV-LPQTL--PSSLVRRRPDILQAEAVLHVASA 326 Query: 291 KIGIAKSDLYP--SLSLNGSI--ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A + L+P +LS +G + A+ H P WS + P+F G + + Sbjct: 327 EIGVATAALFPQIALSASGGVESAVLHSLGTPA-GQAWSVAAGVTAPVFHGGALWFQRKA 385 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + E ++E VL A +V +AL ++ D + V AV+ +++ L YR Sbjct: 386 ALEAYNESSAAYREVVLAAFAQVADALRALEHDSQTVAAQTRAVQAAGEALQLIKEAYRA 445 Query: 407 GRYSLLDIL--DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L IL D + A++ +IA+R + V LY A+G G Sbjct: 446 GTVGYLQILVADGQYHQARIAWLQAIAQR--LQDTVALYAALGGG 488 >gi|169634391|ref|YP_001708127.1| putative outer membrane protein precursor [Acinetobacter baumannii SDF] gi|169153183|emb|CAP02273.1| putative outer membrane protein precursor [Acinetobacter baumannii] Length = 497 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 119/452 (26%), Positives = 201/452 (44%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLK--WWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ WW F D LN+L Sbjct: 42 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDHWWTLFGDAQLNQL 100 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L SS S H F N +S L Sbjct: 101 VTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSM 160 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 161 SAGVSYELDLFGKLARQTEASKWEALATEQDLQSTGQSLIATTAKLYWQLGYLNERYATA 220 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL Sbjct: 221 QQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 280 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 281 HEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATK 336 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP IK +I + ++ Sbjct: 337 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDIKKDIAISNLDYEKAI 396 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 397 IQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLL 456 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 457 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 488 >gi|157738362|ref|YP_001491046.1| RND efflux system, outer membrane lipoprotein [Arcobacter butzleri RM4018] gi|157700216|gb|ABV68376.1| RND efflux system, outer membrane lipoprotein [Arcobacter butzleri RM4018] Length = 466 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 105/438 (23%), Positives = 205/438 (46%), Gaps = 25/438 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFN 57 MN + L +L +GCT+ P ++P F S+ NS + +++ W Sbjct: 1 MNKINISIILTTILFSGCTLTPNLETLDSNVIPQTFKNNSVENSSDDLSLVKPNWENFVQ 60 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---- 111 D +L K+V +AL+ N + A I +A+ RAD FP+ + S +H N Sbjct: 61 DETLKKVVSLALENNKDLKIALLNIESARATYRIARADNFPTFDAKGSATHSKSMNSENS 120 Query: 112 --LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + + + ++IDLFG+ R + +S+L + S + K+++IS+ I ++I Sbjct: 121 TSISHNYSANISASYEIDLFGKVRSLSQSALDSFLSTQYAANATKISLISETITAWITLA 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E++ +A + + +K EL+ ++ G SK + +A + + + + S Sbjct: 181 IHQEQLKLATETVKNLEKVYELTQKRYLAGVVSKTDVFDAKASLNEAQISVISYSNSVEQ 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + + ++ P + L +++ L P I ++++ RPDI E L Sbjct: 241 DKNALELIVAQPLNDDLLPKSFETHTSWLMLVKP---AISSNILLGRPDIMQAEYNLKSK 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +P++SL + + + +N + WSF P + +PIF G+ +N+ Sbjct: 298 NANIGAARAAFFPTISLTANSGIASRSLSDLFNGNAQNVWSFSPNISIPIFSGGENMANL 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++++ A KEV + L +INE + K + VE KS +S+ Sbjct: 358 DYTYAQRDIALQEYEKSIQTAFKEVNDTLVIRKTINEQ---IQKQKELVEAVSKSYEISL 414 Query: 402 INYRQGRYSLLDILDIER 419 +Y+ G S L++L +R Sbjct: 415 NSYKIGIGSFLNVLTSQR 432 >gi|289163890|ref|YP_003454028.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|288857063|emb|CBJ10878.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 495 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/467 (22%), Positives = 219/467 (46%), Gaps = 40/467 (8%) Query: 18 CTVGPEYTKPHMPL--------LP-----TQFSIGNSKNLI-NID-TLKWWESFNDTSLN 62 C VGP + P P LP T S G ++ I N D L WWE ++ +N Sbjct: 24 CMVGPNFHSPAPPKVKHYTEKPLPEKTVKTAGSGGQQQSFITNKDIPLLWWELYHSPEIN 83 Query: 63 KLVKIALQQNLTILQATERINAAKENIL-SVRADLFPS---SYASISHRF------IPNL 112 +L+ L + T++ A+ + A+EN+ + ++P+ + A R+ IP+ Sbjct: 84 QLIHTGLANSPTLVAASAALRQAQENLKEQIGNSMWPAIDVTDAIQRQRYSGVQIGIPSE 143 Query: 113 KTNST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + + +D+FG RR IE+ A +D +V A L + S ++ + + Sbjct: 144 SVTFSLYYTSFNLSYTLDVFGGARRQIEALRAQVDYQQFEVIAAYLTLTSNIVTTAVAVA 203 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ +I +++ + + L + ++ G SK +++ + ++ ++ +P L+KS Sbjct: 204 SYQAQIEATLELIQAEQGILNLLNKQYRLGGVSKENVLTQQTLLEQSKATLPPLQKSLSQ 263 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 H +STL+G L ++ L +P + + +P++L+R RPD+R E L Sbjct: 264 AKHALSTLVGAFPDGPLPTIRLD------RLKLPTELPVSLPSNLVRQRPDVRASEALLH 317 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG+A ++L+P +++ G + + N + N WS + P+F G + + Sbjct: 318 AACAQIGVATANLFPQFTISANEGWLNTSWSNLYTARNNVWSATGTVLQPLFHGGALLAQ 377 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 R A ++ Q+ +Q+ VL A + V + L + D + + A + + S++L++ Sbjct: 378 RRAAIAAYQQTAAQYQQIVLQAFQNVADVLRGLEVDARTLQAQIRAEDAARASLNLTLKQ 437 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S +++L+ ++ + + A+ L+ A+G G+ Sbjct: 438 YRLGAVSYINLLNAQQQYQQTRISRIQAQATRYNDTAALFQALGGGW 484 >gi|26988118|ref|NP_743543.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida KT2440] gi|71153371|sp|Q88N32|TTGC_PSEPK RecName: Full=Probable efflux pump outer membrane protein ttgC; Flags: Precursor gi|71153831|sp|P0C071|MEPC_PSEPU RecName: Full=Multidrug/solvent efflux pump outer membrane protein mepC; Flags: Precursor gi|24982847|gb|AAN67007.1|AE016329_2 multidrug/solvent RND outer membrane protein TtgC [Pseudomonas putida KT2440] Length = 484 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 32/473 (6%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S ++ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NL 112 F+D +L +L++ +L N + A ++A + RADLFP S+ S S + +P N+ Sbjct: 60 FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM 119 Query: 113 -KTNSTGQLD--------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 +T +G S +++DLFG+ R + E +L S+ ++ +++ + Sbjct: 120 SQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + L Y+++ L+ G S L + + ++ Sbjct: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239 Query: 223 EKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ +V++++ LLG PA + ++ ++ + G+P+D+++ RPDI+ Sbjct: 240 QRLVAQDVNSLTVLLGTGIPA-DLAKPLELDADQL-----AEVPAGLPSDILQRRPDIQE 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS+SL GS++ + F G W F P++ LPIF+ Sbjct: 294 AEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNA 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +K+++ ++ +++T+ A +EV + L + ++ + + V+ ++ Sbjct: 354 GSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYY 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 414 RLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466 >gi|167035422|ref|YP_001670653.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166861910|gb|ABZ00318.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 484 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 222/473 (46%), Gaps = 32/473 (6%) Query: 3 ILRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWES 55 + +++ SL + +L GC++ P+Y P P+ +S S ++ + W + Sbjct: 1 MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQ-GWRQF 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NL 112 F+D +L +L++ +L N + A ++A + RADLFP S+ S S + +P N+ Sbjct: 60 FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM 119 Query: 113 -KTNSTGQLD--------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 +T +G S +++DLFG+ R + E +L S+ ++ +++ + Sbjct: 120 SQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + L Y+++ L+ G S L + + ++ Sbjct: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239 Query: 223 EKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ +V++++ LLG PA + ++ ++ + G+P+D+++ RPDI+ Sbjct: 240 QRLVAQDVNSLTVLLGTGIPA-DLAKPLELNADQL-----AEVPAGLPSDILQRRPDIQE 293 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L + A IG A++ +PS+SL GS++ + F G W F P++ LPIF+ Sbjct: 294 AEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFAGGQGTWLFQPQINLPIFNA 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +K+++ ++ +++T+ A +EV + L + ++ + + V+ ++ Sbjct: 354 GSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYY 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 414 RLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466 >gi|76811786|ref|YP_331648.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|126452553|ref|YP_001064305.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|226193027|ref|ZP_03788637.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|242315992|ref|ZP_04815008.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254261859|ref|ZP_04952913.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76581239|gb|ABA50714.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] gi|126226195|gb|ABN89735.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|225934627|gb|EEH30604.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|242139231|gb|EES25633.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254220548|gb|EET09932.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 538 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLAALSGQRMVSSVGLVKALGGGWD 478 >gi|255692886|ref|ZP_05416561.1| multidrug resistance protein, FusA/NodT family [Bacteroides finegoldii DSM 17565] gi|260621335|gb|EEX44206.1| multidrug resistance protein, FusA/NodT family [Bacteroides finegoldii DSM 17565] Length = 465 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 115/462 (24%), Positives = 210/462 (45%), Gaps = 39/462 (8%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 17 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTTNFGN---LPWREVFTDPQLQS 73 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-Q 119 L++ L QN +L A + + AA+ +++S R PS S F N T + Sbjct: 74 LIEAGLNQNTDLLSAAQNVKAAQASLMSARLAYAPSLGLSPQGTISSFDKNAATKTYSLP 133 Query: 120 LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + + W++DLFGQ +R+ + +L + AY Q + VIS + Y ++ Sbjct: 134 VTASWQVDLFGQLLNSKRNAQVTLKQVK-AYRQA--VQTQVISNVANMYYTLLMLDRQLE 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNVHN 232 I + ++ K+N E A ++ +E A + + IP +E+S R + Sbjct: 191 ITKETAEILKRNAETME-AMKDAAMYNINSAGVEQSKAAYAQVLATIPDIEQSIRETENA 249 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +ST LG E H +++ Q L ++ GIP L+ NRPD++ E LA Sbjct: 250 LSTFLG----EAPHAIKRGVLEAQV-LPTELSAGIPIQLLSNRPDVKAAEMSLASCYYNT 304 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A++ YP ++L+GS T+++ PG G L P+F +G+ + ++ A+ Sbjct: 305 NSARAAFYPQITLSGSAGWTNNSGAGIVNPGKLLASVVG-SLTQPLFYRGQNIARLKAAK 363 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ +++Q+ +LNA EV NAL+ + + V + VE +K+ + + G Sbjct: 364 AQEEQAKLSFQQALLNAGSEVSNALSLYQKTSEKVESRKMQVESAQKASEDTKELFNLGT 423 Query: 409 YSLLDILDIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSG 449 + L++L +++ ++ +S Q+ ++ V LY A+G G Sbjct: 424 STYLEVLSAQQSYLSAQLSQVSDCFDQM-QAVVSLYQALGGG 464 >gi|167621684|ref|YP_001672192.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167351807|gb|ABZ74533.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 463 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 211/472 (44%), Gaps = 42/472 (8%) Query: 3 ILRAIFSLFIVLLA--GCTVG----PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 ++R +FS+ + LA GC VG P + P+ + G + + WW++F Sbjct: 1 MMRRLFSIVLCGLAVQGCAVGITPAPPAARVTAPIAWRAPAAGGQPAV----SPTWWDAF 56 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 D L V+ AL NL I A R+ A + + L P+ AS++ + L NS Sbjct: 57 GDPELRHAVEAALLHNLDIAAAETRVREADALFVQAHSALVPTLTASVAVQDAQAL--NS 114 Query: 117 TG----------QLDSDWKIDLFGQRRHIESSLANL--DSAYAQVDIAKLNVISKLIPSY 164 G QL +++DL+ + R ++S L S Y + +A L++ Y Sbjct: 115 LGRASDSATAQPQLQIAYEVDLWRRLRQADASARALLQASQYGRAAVA-LSIAGATARGY 173 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I ++ IA + L + + L+ + G TS+L L + +E + +P L Sbjct: 174 IGLASLDAQLQIARETLASRDEALRLATRRADNGVTSRLELTQARSEREGAAQRVPALV- 232 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 + V L + + + + +L +P + G+P++L++ RPDI E Sbjct: 233 ---LAVERQENGLRLLLGGLPGPVPRGAIS---SLTLPTVAPGLPSELLQRRPDISQAEA 286 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ + A + +K+ L P + L GS+ + H + + WS G IFD G++ Sbjct: 287 QVRAADAALAASKAALLPQVRLTGSVGELFVQHLDPV----SVWSVGGSALATIFDAGRL 342 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 S + AE+ ++ TVLNA E ENAL +++ + T + ++++ + Sbjct: 343 SSQVAGAEARRDASAYAYRHTVLNAFSEAENALEGVSDLTEQRTAAERQRVALREALHHA 402 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 YR G S L+ LD +R E+ + + + QL+ S + LY A+G G++ Sbjct: 403 TSRYRAGYASYLEQLDAQRGLLSAELAVVQLQEAQLSNS-LTLYQALGGGWS 453 >gi|167647268|ref|YP_001684931.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167349698|gb|ABZ72433.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 474 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/453 (22%), Positives = 206/453 (45%), Gaps = 28/453 (6%) Query: 21 GPEYTKPHMPL--LPTQFSIGNSKNLIN----IDTLKWWESFNDTSLNKLVKIALQQNLT 74 GP Y KP + LP + + L D WW D L+ L+ N T Sbjct: 23 GPAYEKPEVSATSLPATYKALDGWKLATPGDLTDRGDWWTLLGDPQLDALIGRVNVSNQT 82 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------------LDS 122 I A A+ + RA LFP+ S S + +G + + Sbjct: 83 IAAAEANYRQARAIVREQRASLFPTVDLSGSATKSGGSGSTGSGAGASSSGRRYQVGIGA 142 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+ DL+G+ R + + AN ++ A + A+L++ +L +Y+ R I++ + + Sbjct: 143 SWEPDLWGRVRAGVSGAKANAQASQADLAGARLSMQGELAVNYLGLRQTDAEIALVAKTV 202 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + Y++++ ++ ++ K +++ ++ ++D+ +L ++ + I+TL+G PA Sbjct: 203 EGYQRSLTITQNRYAAAIAPKSDVLQATTQLAGAQADLESLRQTRATYENAIATLVGEPA 262 Query: 242 TEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + F K + + + +P I G+P+ L+ RPDI E+++A + A IG+A++ + Sbjct: 263 SGF-----KLAADPAWSAGVPEIPAGVPSTLLERRPDIAAAERRVAAANADIGVARAAFF 317 Query: 301 PS--LSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P+ LS +G+ + S F WS G +FD G K+ + +A +S Sbjct: 318 PTFGLSASGNSGASGLGSLFSASANTWSLGLSAAQTLFDAGARKARVEQARASYDATVAD 377 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++T L+A ++ EN LT++ ++ L+ + + ++ + + Y+ G+ + D++ Sbjct: 378 YRQTALSAFEDAENQLTAVGALERRYALLKTSSDAADQTEQMLLNQYKAGQVAYTDVVQA 437 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L A + V L A+G G+ Sbjct: 438 QASALSARRSLLTAAVARQTTAVALIQALGGGW 470 >gi|323527893|ref|YP_004230046.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323384895|gb|ADX56986.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 527 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 111/464 (23%), Positives = 203/464 (43%), Gaps = 48/464 (10%) Query: 21 GPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GP+Y +P +P + ++ D WW + D L+ L + N TI Sbjct: 35 GPDYKRPDA-GIPASYKEAAPGWKVAQPADQQDRGAWWTLYQDPQLDALEEKLNAANQTI 93 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG---------------QL 120 Q A+ + RA FP+ AS N ++S QL Sbjct: 94 AQYAAAYRQARALVGEARAAYFPTVGASAGATRSGNGASSSASSTTASRSGVYNSYNLQL 153 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W+ DL+G R + + A SA A + A+L+ + L +Y R + + Sbjct: 154 DATWEPDLWGSVGRSVNAQKAGQQSAAADLANARLSAQATLAQTYFSLRALDANQKLLDE 213 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ L+G Sbjct: 214 TVAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQASAIDNGVQRAQDEHAIAVLVGE 273 Query: 240 PATEF-LHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA+ F L M P P + +P+ L+ RPDI E+K A + +IGIA Sbjct: 274 PASSFSLPPM--------PLTATPPAVPAQVPSALLERRPDIASAERKAAAANEQIGIAI 325 Query: 297 SDLYPSLSLNGSIA---------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + +PSL+L+ + LT + F W+ GP+L +FD G ++ A Sbjct: 326 AAFFPSLTLSATGGFQSSVFSQLLTVPSRF------WTVGPQLAATLFDAGLRRAKTEAA 379 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ E T+++TVL A ++VE+ L S ++ + Q AVE ++++++ Y+ G Sbjct: 380 RAAYDESVATYRQTVLTAFQDVEDNLASQRILEREIVVQQQAVESARQALAIVTNEYKAG 439 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + E L Q S V L A+G G++ Sbjct: 440 TVGFLNVLTAQTTAFTAEQKLQTIAGQRMVSSVGLVKALGGGWD 483 >gi|56476439|ref|YP_158028.1| outer membrane protein [Aromatoleum aromaticum EbN1] gi|56312482|emb|CAI07127.1| probable outer membrane protein [Aromatoleum aromaticum EbN1] Length = 501 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 107/454 (23%), Positives = 212/454 (46%), Gaps = 33/454 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC + T+P + +P +S + WW SF+ L L+ AL + Sbjct: 39 GCAITEPATRPGL-TMPPGWSEPVPAAAMQPGA-GWWRSFSSRPLQGLIDEALAGSPDFR 96 Query: 77 QATERINAAKENILSVRADLFPSSYASIS-----HRFIPN----LKTNSTG-QLDSDWKI 126 A ER+ A+ + + A L P +A++ R P + + S+G L +++ Sbjct: 97 IAAERVRQAEIQLRTAGASLLP--FATVGGDTDWRRTDPARGRAIDSESSGVSLAISYEV 154 Query: 127 DLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 DL+G+ + + +A D++ A + +L +++ + +Y + RI IA + Sbjct: 155 DLWGR---LAAGVAGADASLAATRHDFEAVRLTLVAGVASTYFQLLTTRTRIDIARDNIA 211 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ ++ ++ GA S L + + + + + + LE R + ++ LLG Sbjct: 212 IAERVFDIVEARYRNGAASALDVSRQHGTVLAQRAALLPLENQERQTLSALAVLLGRVPQ 271 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 F L IP + G+PADL+ RPD+ E +LA + A + A++ L P Sbjct: 272 GF-----GVDGETLATLAIPEVAPGLPADLLVRRPDLASAEAQLAGADADVAAARAALLP 326 Query: 302 SLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 S+ L+GS L S + + L +FD G++++++ A S +E ++ Sbjct: 327 SVQLSGSAGLASTALLSLANPSNSVALTASLTQTLFDGGRLRNDVEAARSRRREFVENYR 386 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + A+KEVE+AL + + +++ Q + +++ L+ + YR+G LL +LD +R Sbjct: 387 AAIFTALKEVEDALGNADRNRRQEGTQQLIRDQAARALRLAELRYREGADDLLAVLDAQR 446 Query: 420 ATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 + + DL +A+ + A+ + +DL+ A+G G+ Sbjct: 447 TLFQAQ-DL-LAQLRFARLSAALDLFKALGGGWE 478 >gi|264678830|ref|YP_003278737.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262209343|gb|ACY33441.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 475 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 104/425 (24%), Positives = 194/425 (45%), Gaps = 23/425 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNS----KNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC + P Y P +P+ P S GN+ + + + + L ++V +AL N Sbjct: 17 GCNLAPAYKTPDLPV-PETVS-GNALPAQASEAALQQAQALQWLQSPQLREVVALALSNN 74 Query: 73 LTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNS--------TGQLD 121 + A E I A+ RADL P A S R +L T T QL Sbjct: 75 RDLRVALENIEKARAQYGITRADLLPGITAQAQSNRTRTAGDLTTAGRSSITEQYTAQLG 134 Query: 122 -SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +++DL+G+ R++ E+SL + ++ +++ + +++ + R+ +A Sbjct: 135 FASYELDLWGRIRNLSEASLQQFLQSQDNRRNVQIGLVADVANAWLTLAADQARLQLARD 194 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 LD K EL+ G+TS L L + + + + D+ + + + + L+G Sbjct: 195 TLDSRIKAFELTRRMHELGSTSGLVLAQNQTTVDTARGDVASYTSQVDRDRNALQLLVGG 254 Query: 240 PA-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + L Q + + + +P+ ++ RPD++ E+ L A IG A++ Sbjct: 255 AVPVQLLPTAQTLAGAADTAALKVVPVPLPSSVLLKRPDVQAAERNLQAMNANIGAARAA 314 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 L+PS++L GS+ D F N+ WSF P + LPIFD G+ ++N++ AES+ + Sbjct: 315 LFPSITLTGSVGTGSNELDRLFGNNNSTWSFIPLVKLPIFDGGRNRANVQVAESNQRIAL 374 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++++V A KEV + L + + + V +K+ LS ++ G + L +L Sbjct: 375 SQYEKSVQTAFKEVADVLADRAQWGERLAAQTSMVANTQKAFDLSNARFKAGVDNYLTVL 434 Query: 416 DIERA 420 D +R+ Sbjct: 435 DAQRS 439 >gi|326317914|ref|YP_004235586.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374750|gb|ADX47019.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 489 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 103/460 (22%), Positives = 195/460 (42%), Gaps = 42/460 (9%) Query: 18 CTVGPEYTKPHMPL-LPTQFSIGNS-----KNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 C+V P Y P + +PT F + D WW F D LN+L Sbjct: 26 CSVAPPYQPPALATPMPTAFKEAGALWQPAAPADAADRGDWWTLFGDEELNRLAAQVQVS 85 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-----LKTNSTGQLDSDWKI 126 N I A A+ + RA L P S S T + L + W Sbjct: 86 NQNIAAAVAAYAQAQGLVREQRAGLLPGVSLSASESRAGGEGSARRGTTTQAALGATWAP 145 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D++G+ ++S+ A+ ++ A + A+L+ + L+ +Y R ++ + Y+ Sbjct: 146 DVWGRLGSTVDSARASAQASEADLAAARLSAVGSLVAAYFQLREADAEAALLGDTVQAYE 205 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + + ++ ++ G ++ +++ ++ + +D+ T +++ H I+ L G P F Sbjct: 206 RALRIAQNRYDAGVAAQSDVLQARTQLANARADLATAQRNRAGYEHAIAVLAGQPPAAF- 264 Query: 246 HYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + ++ + +P+ L+ RPDI E+ +A + A+IG+ +S +P Sbjct: 265 --------SLPAGTWVASVPAVPAALPSTLLERRPDIAAAERAVAAANAQIGVQRSAYFP 316 Query: 302 SLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S SL S+ + + F WS G +FD G I + + +A ++ + + Sbjct: 317 SFSLTASLGRSGTSLGDLFSASGALWSLGLSAAQTVFDGGAIAARVDQARAARDARVANY 376 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI---- 414 ++TVL A + VE+ LT++ + Q AV +++ + YR G+ S D+ Sbjct: 377 RQTVLGAFQTVEDQLTAVRTLQAQEPLRQEAVSAAQRTEEQMLNRYRAGQVSYTDVVTAQ 436 Query: 415 ---LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L RA +++V+ RQLA L A+G G+ Sbjct: 437 VAALSARRALLQLQVN-----RQLA--VASLIQALGGGWQ 469 >gi|326798901|ref|YP_004316720.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] gi|326549665|gb|ADZ78050.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] Length = 481 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 120/485 (24%), Positives = 216/485 (44%), Gaps = 57/485 (11%) Query: 11 FIVLLAGCTVGPEYTKPHMPLL-------PTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ ++ GC V YT P L T S S++ +N L W E F D L Sbjct: 10 YVYVIIGCLVLITYTGCKTPALVQREANTKTPASYNGSQDTVNTAKLTWKEYFTDPYLAA 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASIS----H 106 L+ AL+ N + + I ++ I + + P + Y +I H Sbjct: 70 LIDTALKNNQELNITLQEIEISRNEIRERKGEYLPFVGIKGAAGVDKVARYTNIGALEHH 129 Query: 107 RFIPNLKTNSTG------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKL 160 I K N L + W+ID++ + + + + S Y K VI+ L Sbjct: 130 VEIKEGKENPEPLPDYMLGLSATWEIDIWKKLHNAKKAAV---SRYLSTVEGKNFVITNL 186 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELS-------HLKFTQGATSKLSLVKLEAEIK 213 + A + E +++ +Q LD+ KKNIE+ ++ ++L++ + EAE+ Sbjct: 187 VAEI--ANSYYELLALDNQ-LDIVKKNIEIQSNALRIVKMQKEAAQVTELAVRRFEAEVL 243 Query: 214 SIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +S +++ + I+ LLG YP +Q+ S+NF+ + ++ G+PA L+ Sbjct: 244 NTKSLQYAIQQRVTETENRINFLLGRYPQP-----IQRTSDNFEHLIPEAVHTGLPAQLL 298 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSF 326 NRPDI+ E +LA + I +AK+ YPSL + S A+ + P Y + +S Sbjct: 299 ANRPDIKQAELELAAAKLDIKVAKARFYPSLGI--SAAIGYQAFDPTYLVKTPKSLLYSL 356 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + P+ ++ IK+ A + + ++ TVLNA EV N L IN +K Sbjct: 357 AGDITAPLINRNAIKAAYYNANAKQIQAVYNYERTVLNAYVEVANQLAKINNLEKSYDLK 416 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V+ +S+ +S ++ R +++L +R + + +L K Q + V++Y A+ Sbjct: 417 SKQVDALSQSIGISNSLFKSARADYMEVLLTQRDALESKFELVETKMQQMNAMVNIYRAL 476 Query: 447 GSGYN 451 G G+N Sbjct: 477 GGGWN 481 >gi|315498298|ref|YP_004087102.1| rnd efflux system, outer membrane lipoprotein, nodt family [Asticcacaulis excentricus CB 48] gi|315416310|gb|ADU12951.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] Length = 467 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 123/469 (26%), Positives = 217/469 (46%), Gaps = 37/469 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLN 62 S +LL GC G K P F + N L +W F+D +L+ Sbjct: 10 LSFAALLLTGC-AGEPLAKDAGLTPPAAFK-APATNETTTPPLAQRADAFWLIFSDPALD 67 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTN 115 L A+ N + A R+ A+ I RA P SS AS + + P T Sbjct: 68 DLEARAMTHNTDVAIAAARVQQARALIRQARAVQLPQVSAGLQSSRASQTGQS-PKASTL 126 Query: 116 STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVISKLIPSYIDARHFKER 173 LD +++DL G R + A LD+ A+ A+L V + +Y R E Sbjct: 127 HAAGLDLGYEVDLSG-RLLKATQAATLDATAAEDNAKWAQLLVQGAVAETYFALRALDED 185 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN- 232 +I + L+ Y+ + ++ ++ G ++L +V+L+ E+ + E+++ L++ R V N Sbjct: 186 RAIVAETLEAYQGTLSVTQNRYAAGEVAELDVVRLQTEVATTEAELKALDRQ-RAQVENA 244 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQP-NLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 + L+G + F ++ ++ QP +P I G+P++L+ RPD+ EK + + Sbjct: 245 LGLLVGDLPSTF--RVEAKAWETQPWAGAVPLIPAGLPSELLTRRPDVTAAEKIMQAAQK 302 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 ++GIAK+ +P LSL S + + F +WS + IFD G+ K+ I A Sbjct: 303 RVGIAKAAWFPRLSLTASAGGASNELSDVFSDSARNWSVTAIVAQAIFDGGQRKAGIELA 362 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSI----NEDKKIVTKLQHAVELHKKSMSLSMIN 403 + + ++++VL A +VENAL+ I +E + T L A ++++ LS Sbjct: 363 QGDLAIAFAQYRQSVLLAFGDVENALSDIEGLSSEAETQATGLAAA----RRALDLSHAR 418 Query: 404 YRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S L++LD +R+ ++ DL + +Q ++ V L A+G + Sbjct: 419 YKHGYVSQLEVLDAQRSYLRIRRQDLQVRAQQY-QATVRLIRALGGEWT 466 >gi|198276131|ref|ZP_03208662.1| hypothetical protein BACPLE_02320 [Bacteroides plebeius DSM 17135] gi|198270943|gb|EDY95213.1| hypothetical protein BACPLE_02320 [Bacteroides plebeius DSM 17135] Length = 415 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 102/432 (23%), Positives = 206/432 (47%), Gaps = 41/432 (9%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS 100 +++ ++ +L W E F D L +L+++ L N + A ++ A+ +++ R PS Sbjct: 3 AEDTTSLASLSWKELFTDPQLQQLIEVGLAHNTDLSIARLKVKEAEALLMTSRLSYLPS- 61 Query: 101 YASISHRFIPNLKTNSTGQ-----LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDI 151 + + +L N + + +DW+IDLFG+ +R +++L AY Q Sbjct: 62 VSLTPQGTLTSLDGNKPSKTYNLAISADWEIDLFGKLLNAKRGAQAALEQ-SEAYRQA-- 118 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + +++ + SY E++ I + D + +++ G +++++ + EA Sbjct: 119 VQTQLVATIANSYYTLLMLDEQLGITRRTADTWTESLRTMKALKRAGQATEMAVAQTEAS 178 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++++ + ++E+ +++STLLG E + ++ F +L + GIP L Sbjct: 179 KLAVDASVLSIERQINEMENSLSTLLGMSPQE-VGRSTLEAQQFPDSL----STGIPLQL 233 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHW--S 325 + RPD+ E +LA + A+S YP ++L+GS T+ PG W S Sbjct: 234 LSRRPDVCQCENQLAVAYYATNSARSAFYPGITLSGSAGWTNAAGAAITNPG---QWLLS 290 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-------INE 378 L P+F++GK +N++ A++ +E +T+Q+++L+A EV +AL I Sbjct: 291 AVGSLVQPLFNRGKNIANLKIAKAQQEEALLTFQQSLLDAGAEVNDALVQWQTARKRIQL 350 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 D++ T LQ A+ + M S NY L+++ +A + E++ + + Sbjct: 351 DEQQCTSLQSALRSSELLMQHSSQNY-------LEVITARQALLQAELNTVTDRFDEIQG 403 Query: 439 YVDLYIAIGSGY 450 ++LY A+G GY Sbjct: 404 VINLYHALGGGY 415 >gi|120437716|ref|YP_863402.1| OprM-like outer membrane efflux protein [Gramella forsetii KT0803] gi|117579866|emb|CAL68335.1| OprM-like outer membrane efflux protein [Gramella forsetii KT0803] Length = 465 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 114/469 (24%), Positives = 210/469 (44%), Gaps = 40/469 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I + ++ L C V +Y +P + + ++ +N+ T+ W E F D L ++ Sbjct: 11 IAGIGLLNLQSCFVAKDYDQPEVVKEDYYRTDNIEQDSLNMATISWTEMFTDPILQDYIE 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHR-------FIPNLKTNST 117 LQ N+ I A ++I AA+ + +A P+ AS +H+ F + Sbjct: 71 QGLQNNIDIRIALQQIIAAEAYVKQGKAGYLPTINGNASYTHQKLSENSQFGNQFSSLDQ 130 Query: 118 GQLDSD--WKIDLFGQRRHIESSLANLDSAYAQVDIA----KLNVISKLIPSYIDARHFK 171 QL +D W+ D++G+ I S D++Y Q A K +I+ + +Y Sbjct: 131 YQLSADLSWEADIWGK---IRSQKRAFDASYLQSIAAHQAVKTRLIANIASTYYQLLSLD 187 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E+I I + +D + ++E + G +++ + + EA++ + + + L+ R+ + Sbjct: 188 EQIKITEETIDNRENSLETTQALKEAGNLTEVGVKQTEAQLYTAQGILIDLKNQERLLEN 247 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S LLG + ++S + + +NIG+P L+RNRPD+ E L ++ Sbjct: 248 TLSILLGVAPIQI-----ERSELEEQEITTDLNIGVPVQLLRNRPDVIAAEYDLVNAFEL 302 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP---KLYLPIFDKGKIKSNIRRAE 348 +AKS+ YPSL L + L S +N F L PI + +I++ + Sbjct: 303 TNLAKSNFYPSLRLTATGGLQALESGDLFNASSLFATVMGGLAQPILNGRRIRTEYEVSV 362 Query: 349 SSAQEQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLSM 401 + ++ + ++ +L A KEV +AL S I +K A E ++ ++ + Sbjct: 363 AQQEQARLEFRRAILTASKEVSDALYSYEAATNKIEVKQKEYNAYDLATEYSEELLNNGL 422 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 NY L++L +DLS AK K+ VDLY A+G G+ Sbjct: 423 ANY-------LEVLTARENALNSSLDLSNAKYNQLKAVVDLYEALGGGW 464 >gi|225423387|gb|ACN91210.1| CmeC [Campylobacter lari] Length = 487 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 34/472 (7%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N+ + I + L+ C++ KP++ + ++ +N I+I+ +WW++F+D L Sbjct: 7 NMHKLIVLVSCFLITACSL-----KPNLEIKDVNYTKSLDQN-ISINK-QWWKTFDDNYL 59 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------PNLKTN 115 N LV+ AL+ N + A + A E + R+DL P S S P+ K+N Sbjct: 60 NILVEQALKNNNDLQIAYINLQKAYEALGIARSDLLPKLDGSASGARAKTSINAPSNKSN 119 Query: 116 S-------TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L+ +++DL+G+ R +S A L ++ + A+L++IS ++ +Y + Sbjct: 120 DFVYGNDFNMGLNLSYEVDLWGKYRDGYGASKAKLQASEFDYESARLSLISNVVKTYFNL 179 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E++ I + Y+K EL F G S+ L K +AE+++ + + Sbjct: 180 ASLSEQVKILEETTQSYQKTCELKLEHFKLGVISEYELNKFKAELENSRVLLTNAKIQKE 239 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 N + L + L+ + Q L IP GI ++++ RPD++ K L + Sbjct: 240 ANTKALKILTSNDIDDILYNSIEYKKIGQYELSIP--EGIGSEILLQRPDVQASLKILEE 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 +G+A++ P+LSL G + ++ G NT W+ +PIF G+I +N Sbjct: 298 KNYLVGVARTAFLPNLSLTGLLGFQSNDLDLLVKHGSNT-WNVAGNFAMPIFHWGEIMNN 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLS 400 + A+ + E ++ ++ T+ A E+ AL S E+++ L A K +S Sbjct: 357 VNIAKLTKDEAFLQYENTLKTAFGEIRLALFNRQSYYENEQNYKNLFLA---QSKIYEIS 413 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y G +L D L +R ++ + + +LA S VD+ A G G+N Sbjct: 414 TLRYENGMINLADFLQDQRNYLNAKLSYTNSSYELANSIVDVMKAFGGGFNA 465 >gi|224026805|ref|ZP_03645171.1| hypothetical protein BACCOPRO_03562 [Bacteroides coprophilus DSM 18228] gi|224020041|gb|EEF78039.1| hypothetical protein BACCOPRO_03562 [Bacteroides coprophilus DSM 18228] Length = 454 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 214/459 (46%), Gaps = 28/459 (6%) Query: 10 LFIVLLA----GCTVGPEYTKPHMPLLPTQ--FSIGNSKNLIN-IDTLKWWESFNDTSLN 62 LFI L+ GC + Y +P + + N+ + + + +LKW E F D L Sbjct: 4 LFIAALSLMATGCGIYNRYERPDSVQVEADSLYRTENAPDTTSSLASLKWEELFTDPYLQ 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTNST 117 L++ L+ N + A R+ A+ + S R PS S+ KT S Sbjct: 64 SLIRRGLEANTDLQTAVLRVEEAQATLRSSRLAYLPSVQLDPQGTLSSYDGSKTQKTYSL 123 Query: 118 GQLDSDWKIDLFGQRRHI--ESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G + W+IDLFG+ + +S A L+S AY Q + VI+ + SY E+I Sbjct: 124 GG-SASWEIDLFGKLTNAKRQSRAALLESEAYRQA--MQTQVIATVAESYYSLLMLDEQI 180 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I Q ++ +++ ++ G + +L + EA S E+ + +L++ + + Sbjct: 181 RITGQTVESWREYVQSLQALMKAGEADRATLSQAEASRLSAEASLLSLQQQVSEQENALC 240 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 + +G + ++S + +++G+P +L+ RPD+R E L + Sbjct: 241 SFIGEASRNI-----ERSTLDEQQFPQEMSVGLPVELLSRRPDVRQAEASLMQAFYATNS 295 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A+S YPS++L+GS T+ PG + G L P+F++G+ +N++ A++ Sbjct: 296 ARSAFYPSITLSGSAGWTNSGGAAIANPGAWLLQAVG-SLVQPLFNRGQNIANLKIAKAQ 354 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 QE + +++++L+A +EV NALT ++ + V+ + ++S + + + G + Sbjct: 355 QQEALLAFKQSLLDAGQEVNNALTQWQTARERIRLENEQVKHLETTVSDTRLLMKYGTIN 414 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L ++ +++L+ + + ++LY A+G G Sbjct: 415 YLQVLTARQSLLSAQLNLASDRYNEIQGVINLYHALGGG 453 >gi|167836667|ref|ZP_02463550.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 381 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 163/341 (47%), Gaps = 18/341 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 45 WRAYFTDPALRALIDAALMNNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 104 Query: 108 FIPNLKTNSTGQLD------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A+L++I+++ Sbjct: 105 YDPVLRESATSSLYRASVGLSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARLSLIAEV 164 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R +++ +A + L L+ ++ G ++ + L E + + + Sbjct: 165 ASAYVTERALVDQVKLAERTLAARDATYALTQRRYAAGTSTAIELRTAEMLVAAARASKA 224 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + L G +F + + ++ G+ +DL+ RPDIR Sbjct: 225 ALEREHTQAASALKLLAG----DFSAALPADAPALDELAVARVSPGLSSDLLEQRPDIRQ 280 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E++L + A IG A++ +P ++L GS++ F ++ W+F P+L LPIF Sbjct: 281 AEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAG 340 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 G+ ++N+ A++ +++T+ A +EV +AL + ++ Sbjct: 341 GRNRANLELADARKHIAVAEYEKTIQTAFREVADALVARDQ 381 >gi|256840202|ref|ZP_05545710.1| outer membrane protein oprM [Parabacteroides sp. D13] gi|301311294|ref|ZP_07217222.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] gi|256737474|gb|EEU50800.1| outer membrane protein oprM [Parabacteroides sp. D13] gi|300830868|gb|EFK61510.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 20_3] Length = 463 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 99/427 (23%), Positives = 191/427 (44%), Gaps = 33/427 (7%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS 100 S + N+ L W E F D L L++ L N+ + A R+ AK + S R PS Sbjct: 50 SADTTNMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAVLRVEEAKVLLTSARLSFLPS- 108 Query: 101 YASISHRFIPNLKTNSTGQ----------LDSDWKIDLFGQRRHIESSLANLDSAYAQVD 150 F P S G L + W++DLFG + + +S ++Y Q Sbjct: 109 -----INFAPQGTITSIGNSEYVKAYSTPLAASWEVDLFG--KLLNASRGQ-KASYLQSQ 160 Query: 151 IAKLNVISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 ++ V S+LI +Y ++ I + +D+YK+N+ + G ++ ++ Sbjct: 161 YSRQAVRSQLIGGIANTYYTLLMLDRQVEITAKTVDIYKENVRVMEAMKIAGMATEAAVT 220 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 ++ A + + LE R +++S LL + ++ P I +G Sbjct: 221 QMRAAYHQVSGSLIELESQVRSVENSLSVLLAKAPQQIDRGTLEE--QVMPE---DIMVG 275 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNT 322 +P L+ NRPD++ E LA + A++ YP L++ + T+ + PG Sbjct: 276 VPLQLLENRPDVKIAEMTLASAYYTTNKARAAFYPGLNITATAGWTNGSGISVANPGQFM 335 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 + L PIF+ GK+ +N++ +++ + + +Q+T+L A KEV +AL + K Sbjct: 336 FQALA-SLAQPIFNNGKLVANLKVSKAEEKIAQMNYQQTILEAGKEVSDALHQYDATSKK 394 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + + +E +K+++ + ++ + + L+IL +++ ++ Q ++ V L Sbjct: 395 LVQDRAQIEQLEKAVAYTSALFQSAQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVVSL 454 Query: 443 YIAIGSG 449 Y AIG G Sbjct: 455 YSAIGGG 461 >gi|254186550|ref|ZP_04893067.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|157934235|gb|EDO89905.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] Length = 538 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGTQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRTAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL+A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|294023819|ref|YP_003547138.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292677599|dbj|BAI99115.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 473 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 105/425 (24%), Positives = 193/425 (45%), Gaps = 27/425 (6%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWESFN 57 +R I L +V L GC P+ P P F+ G S+ D WW +F Sbjct: 1 MRRIAILVLVGGLGGCATVPDLGPRPDPAQPGAFAATRSLAGTSQAWPQDD---WWRTFG 57 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP-----NL 112 DT L+ LV ALQ + T+ QA RI A RA L PS A+ + R L Sbjct: 58 DTQLDTLVGEALQGSPTVAQAAARIRIAVSQADLARAALLPSVGATATARDSRLTQSIGL 117 Query: 113 KTNS------TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T+ G ++ W++DL+G+ + ++++ +A A A+L + S + +Y+ Sbjct: 118 PTDGDWHWLLAGLVNMSWELDLWGKNSSALRAAVSARTAAEADEAAARLALASAVSTAYV 177 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R +A + + ++ +L +F G + S+ + E + + E+ + + ++ Sbjct: 178 DFAQLLVRRDVAADAVRIRRETRDLVVRRFDAGLEPRTSVEQAEGGVDAAEAQLAAINEA 237 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ L+G L +P+ +P NI P +L+ P++ ++ Sbjct: 238 IGLGRNALAALVGAGPDRGLAIEPPSLTTRRPD-ALPANI--PIELVGRNPEVVSARWRV 294 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + +IG+A++ YP+++++G I L DN F + S GP + LPIFD G++ + Sbjct: 295 EAAAERIGVARAGFYPNVNISGLIGLASFGLDNLFRSESVIGSVGPAISLPIFDGGRLSA 354 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R A T+ ET+L A+ +A TS+ ++ V + +V + + L+ + Sbjct: 355 RYRGARGEYDTAVATYNETLLQALHHAADAATSLRALRERVDRTNASVARQEAAYRLAKM 414 Query: 403 NYRQG 407 Y G Sbjct: 415 RYEGG 419 >gi|170742539|ref|YP_001771194.1| RND efflux system outer membrane lipoprotein [Methylobacterium sp. 4-46] gi|168196813|gb|ACA18760.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium sp. 4-46] Length = 496 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/452 (23%), Positives = 212/452 (46%), Gaps = 26/452 (5%) Query: 20 VGPEYTKPHM--PLL------PTQFSIGN----SKNLINIDTLKWWESFNDTSLNKLVKI 67 VGP+Y +P + PL P G ++ D WW + D +L++++++ Sbjct: 23 VGPDYARPSVETPLAYKEGGAPATAMPGRHWRPARPRDEADRGDWWRVYRDPALDRMIRL 82 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNL-KTNSTGQLDSDW 124 N ++ A A+ + RA LFP+ + IS + +T T Q + W Sbjct: 83 IDVDNQSLRNAVAAYRQARALVQEARAQLFPTVLGAPGISRSRSAGIERTTLTLQGSASW 142 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ RR IES +A ++ A + +L ++L +Y R+ + + Q + Sbjct: 143 ELDLFGRVRRQIESDVAAAQASAADIAAVRLATQAELASTYFQLRYQESLQRLLDQTVQA 202 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 Y++++ ++ ++ G ++ ++ + ++++ ++ + + H I+TL+G P +E Sbjct: 203 YQRSLAIAENQYAAGVAARSDVITAQTQLQTTQAQAIAVGLQRAIFEHAIATLIGRPPSE 262 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + +P++ +P+DL+ RPD+ E+ + +IG+A + YP++ Sbjct: 263 VSLARARLAAA---PPSVPVS--LPSDLLERRPDVAAAERAVQRQSEQIGVAVAAFYPTV 317 Query: 304 SLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +L+ + + D N F NT WS +FD G + ++ A ++ T+++ Sbjct: 318 TLSANGGIAGDPARNFFSAANTFWSVAANGSQVLFDGGARGAALQAARAAYDANVATYRQ 377 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TVL A +EVEN L+ + AVE ++++ +++ YR G + ++ + Sbjct: 378 TVLTAFQEVENGLSGQRILARQAAAQNVAVESSRRAVEIALNEYRAGTQNYTTVVTAQAL 437 Query: 421 TAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 EV L I + S V L A+G G++ Sbjct: 438 ALSNEVTALQILLNRFTNS-VSLIRALGGGWD 468 >gi|239500752|ref|ZP_04660062.1| Outer membrane protein [Acinetobacter baumannii AB900] Length = 468 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 121/457 (26%), Positives = 205/457 (44%), Gaps = 29/457 (6%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ +WW F D LN+L Sbjct: 13 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDRWWTLFGDAQLNQL 71 Query: 65 VKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 V L++N +T+ QA R+ A ++ + + L SS S H F N +S Sbjct: 72 VTNVLERNSDLAVAGITLQQA--RLQA---DLTANKQGLRTSSSVSTGHSFDLNSGDDSA 126 Query: 118 GQLDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 L +++DLFG+ R E+S + + ++I+ Y + E Sbjct: 127 KGLSMSAGVSYELDLFGKLARQTEASKWEALATEQDLQSTGQSLIATTAKLYWQLGYLNE 186 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R + A Q L +K +L ++ GA S L L + E ++S ++ + +E+ Sbjct: 187 RYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTA 246 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ LL P + + Q P +P I G+PAD++ RPD++ E +L ++A Sbjct: 247 IAVLLHEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALAT 302 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 K+ YPS+SL S+ + + N + G L LP +K +I + Sbjct: 303 KDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLD 362 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G + Sbjct: 363 YEKAIIQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVA 422 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L +LD ++ T + L K+ +YV L A+G Sbjct: 423 LKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALG 459 >gi|72384094|ref|YP_293448.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72123437|gb|AAZ65591.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 479 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 52/476 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKL 64 SL + LAGC++ P KP P+ P +S +G + +D L D L +L Sbjct: 19 ISLLALTLAGCSLAPHLAKPDAPI-PAAWSGPAVGEGTSF-GLDEL-----VVDPVLCQL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------- 117 ++ A+Q N + QA ++AA+ A+ P+ S L++ S+ Sbjct: 72 IQSAVQNNRDLRQAMLNVDAARLRYRVQGAERLPTIEGRTSL-----LRSKSSIDDPSGN 126 Query: 118 GQLDSD----------WKIDLFGQRRHIESSLANLDSAYAQ-------VDIAKLNVISKL 160 G+ S+ +++DL+G+ R++ D+A+A+ A+L +IS++ Sbjct: 127 GRQVSEVYRSEAAVPSFEVDLWGRLRNLS------DAAFAEYLAEEQNAQSARLTLISEV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y+ R L ++ ++L L+ GATS L L +S +D+ Sbjct: 181 MSVYVRRIGALARFEAVSGTLAARQRTLDLLTLRRDAGATSALELEDARGLTESAAADLE 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + H + LL L M + +++ ++ + G P++L+ NRPD+R Sbjct: 241 AVRRDVE---HANNALLLLTGLIALPDMPQHASDSPTSVVTRLAAGAPSELLYNRPDVRA 297 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDK 337 E L A IG A++ +P +SL G L+ D S F G + W+F P + +PIF Sbjct: 298 AEHALHARNADIGAARAAFFPRISLTGEAGSLSGDLSGLFAGGRSFWNFLPSIQIPIFSG 357 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ +SN+ A + ++ TV A +EV +AL++ + ++ + +E K S+ Sbjct: 358 GRNRSNLELATVRKEIAIAKYEGTVQVAFREVADALSTYQTLGRELSHRKALMESSKVSL 417 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG-YNP 452 +LS + G S L LD +R EV A + S V + A+G Y P Sbjct: 418 ALSEQRQKSGLDSNLRYLDAQRVALTNEVAFIDASTAMQVSIVQTFKALGGRWYQP 473 >gi|300693410|ref|YP_003749383.1| rnd efflux system, outer membrane lipoprotein, nodt family [Ralstonia solanacearum PSI07] gi|299075447|emb|CBJ34741.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia solanacearum PSI07] Length = 475 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 216/468 (46%), Gaps = 51/468 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIAL 69 +V +A C P + P + + T F + + L +WW F D L+ AL Sbjct: 14 LVSIAACAPMPPASLPEVSVAAT-FKEAPTAQGASEAALAGRWWTLFGDAELD-----AL 67 Query: 70 QQNLT-----ILQATERINAAKENILSVRADLFPSSYASIS-----------HRFI---- 109 QQ L+ + A R A+ +RA PS AS+ R + Sbjct: 68 QQRLSDNSPDLAAALARYGQARAASDLLRAAQVPSIGASLDVQRDRQALLRPLRVLGPGS 127 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P+ T++T LD +++DL+G+ R+ +E+ A +A A + A+L + ++L ++I R Sbjct: 128 PDDYTSATLALDVSYEVDLWGRVRQRVEAGAAEARAARADLAGARLALQAQLADTWIALR 187 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +++ + Y + EL ++ G S L L + + ++ S S + + Sbjct: 188 GLDAEVALLRETEASYSRAAELIGHRYQAGTASGLDLARAQTQLYSTRSQLRQALAQRAV 247 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNRPDIRYQEKK 284 H ++TL+G A+ F +P + +P I +G+P+ L++ RPDI +++ Sbjct: 248 LEHAVATLVGANASAFAS---------EPRVVAAVVPAIPVGLPSTLLQRRPDIVAAQER 298 Query: 285 LADSVAKIGIAKSDLYPSLSL--NGSIALTHDNSF-PGYNTHWSFGPKLYLPIFDKGKIK 341 +A + A +G+A++ +PSL+L G + F N W+ G L +FD G+ + Sbjct: 299 VASANASVGVARAAFFPSLTLAAQGGFQTSDFARFIEAPNLFWAVGSGLAATLFDGGRRQ 358 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++I RA+ E ++ TVL A ++VE+ L + + + AV ++++ L+ Sbjct: 359 ADIARAKVVLDEAGQRYRGTVLAAFQQVEDQLALLARYGEAAADERSAVAASQRALDLAT 418 Query: 402 INYRQGRYSLLDILDIERATAKV---EVDLSIAKRQLAKSYVDLYIAI 446 YR G S LD++ + A + E+DL +R ++ V L AI Sbjct: 419 NRYRDGMASYLDVVTAQTANLQARRNELDLVTRQR---RATVQLVRAI 463 >gi|218261177|ref|ZP_03476094.1| hypothetical protein PRABACTJOHN_01758 [Parabacteroides johnsonii DSM 18315] gi|218224187|gb|EEC96837.1| hypothetical protein PRABACTJOHN_01758 [Parabacteroides johnsonii DSM 18315] Length = 453 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/459 (22%), Positives = 209/459 (45%), Gaps = 29/459 (6%) Query: 7 IFSLFIVLLAGCTV----GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I + LL+ C + P T P L + ++ ++ N N++ W E F D L Sbjct: 6 ILTTATALLSSCGIYTKYQPAETTPD-NLYGEEVAVDDTTNFGNVN---WRELFTDPQLQ 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTG 118 L++ LQ N + A +I A+ ++S + PS +IS T Sbjct: 62 ALIEQGLQNNTDLRSAQLQIEEAEAALMSAKLAFLPSFALSPQGTISSFDGGKATKTYTL 121 Query: 119 QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFKERI 174 + + W++D+FG+ R+ + L YAQ + V ++LI Y E++ Sbjct: 122 PVTASWELDIFGRLRNAKQQAKAL---YAQSKDYQQAVRTQLIAGIANVYYTLLMLDEQL 178 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +I+ Q + +K+ + + G ++ + ++EA S+++ I L++ ++++ Sbjct: 179 AISQQTEESWKETVASTRALMDAGLANEAATSQMEAAYYSVQTSILDLKEQINQVENSLA 238 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL T + K ++ P + +G+P ++ NRPD+R E+ L + Sbjct: 239 LLLA--ETPRRYERGKLADQQLPE---DVAVGVPMQMLSNRPDVRAAERSLEQAFYVTNQ 293 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ YPS+ L+GS T+ PG + G L P+F+KG+I + R A++ Sbjct: 294 ARAAFYPSIVLSGSAGWTNSAGSMIVNPGKFLASAVG-SLTQPLFNKGQIMAQYRIAKAQ 352 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E +++Q+ +LNA EV +AL + K + ++ +K++ + + G + Sbjct: 353 QEEASLSFQQALLNAGSEVNDALVACQTSKAKTVLFEKQIQSLEKALESTSLLMEHGTTT 412 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + + +S ++LY A+G G Sbjct: 413 YLEVLTARQSLLSAQLSQTANRFTEIQSVINLYQALGGG 451 >gi|222109478|ref|YP_002551742.1| NodT family RND efflux system, outer membrane lipoprotein [Acidovorax ebreus TPSY] gi|221728922|gb|ACM31742.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax ebreus TPSY] Length = 517 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 180/424 (42%), Gaps = 37/424 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW SF D L+ L+ ALQ N + QA RI A+ + RA P S + R+ Sbjct: 85 WWRSFGDAQLDALITQALQGNPGLQQAAARIARAEAFADTARAAQSPQVNGSLDATRQRY 144 Query: 109 IPN----------LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK-LNVI 157 N +++ T +L W++D FG+ R ++ A A L + Sbjct: 145 SANGPYPPGQAGAVRSVETARLSGSWELDFFGKHRAALAAALGEAQAARADAEAARLLLA 204 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S++ Y + + ++A + L + ++L + G ++L L + E + Sbjct: 205 SRVAQGYFQLARLQAQRAVAERTLQQRTEMLQLVQRRVQAGLDTQLELRQSEGALPEARQ 264 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-----GIPADLI 272 I L + + + + L+ P T + P I+ +PADL+ Sbjct: 265 QIEALREQEALARNALGALIADPQT---------AQTLTPQALAAIHFSETPAAVPADLL 315 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 RPD+ ++ + +G+A++ YP++SL + L D + W GP Sbjct: 316 GRRPDVAAARWRVEAATQDMGVARAQFYPNVSLTAFVGLASVGLDRFIEAGSREWGVGPA 375 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G++++N+R + ++ +L A+++ + L S + + + + A Sbjct: 376 LRLPIFDAGRLRANLRGKAADRDAAVESYNAALLEAVRDAADQLASSSSIARQIAEQHQA 435 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 E + + ++ Y G + L +L E A ++ VDL A R+L + V + A+ Sbjct: 436 GESAQAAYGIARRRYEAGLGTYLQVLSAESQVLAQRRLAVDL--AARRL-DNQVGVMRAL 492 Query: 447 GSGY 450 G GY Sbjct: 493 GGGY 496 >gi|218263136|ref|ZP_03477355.1| hypothetical protein PRABACTJOHN_03036 [Parabacteroides johnsonii DSM 18315] gi|218222921|gb|EEC95571.1| hypothetical protein PRABACTJOHN_03036 [Parabacteroides johnsonii DSM 18315] Length = 463 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 98/419 (23%), Positives = 193/419 (46%), Gaps = 27/419 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N+ L W E F D L L++ L N+ + A R+ AK + S R PS + Sbjct: 55 NMGNLPWQEVFRDPKLQALIEEGLANNVDLQAAILRVEEAKLLLTSARLSFLPSLNLAPQ 114 Query: 106 HRFIPNLKTNSTGQLDS-------DWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNV 156 K +TG + + W++DLFG+ + A L S Y Q I + + Sbjct: 115 GTIT---KMENTGYVKAYTLPAAASWEVDLFGKLLNASRGQKTAYLQSQYTQQAI-RSQL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I + +Y ++ I + +D+YK+N+ + G T++ ++V++ A + Sbjct: 171 IGGIANTYFTLLMLDRQVEITSKTVDIYKENVRVMEAMKIAGMTTEAAVVQMRAVFHQVS 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + L++ R +++S LL Q + + +P + G+P L+ N Sbjct: 231 GSLIELKRQVREVENSLSVLLAKAP-------QPIDRSTLEDQVMPEELMAGVPLQLLEN 283 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKL 330 RPD++ E LA + A++ YP +++ + T+ + S PG + L Sbjct: 284 RPDVKVAEMTLASAYYTTNKARAAFYPGINITATAGWTNGSGVTVSNPGQFMFQALA-SL 342 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF+ GK+ +N++ +++ Q + +Q+T+L A KEV +AL + + + + Q + Sbjct: 343 AQPIFNNGKLVANLKISKAEEQIAKMNYQQTILEAGKEVSDALHLYDATNRKLVQDQAQI 402 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E +K+++ + ++ G+ + L+IL +++ ++ Q ++ ++LY AIG G Sbjct: 403 EELEKAVAYTNALFQSGQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVINLYSAIGGG 461 >gi|241761203|ref|ZP_04759291.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283856331|ref|YP_162515.2| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374110|gb|EER63607.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283775328|gb|AAV89404.2| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 496 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/465 (22%), Positives = 218/465 (46%), Gaps = 39/465 (8%) Query: 14 LLAGCTVGPEYTKP---HMPLLPTQFSIGNS----KNLINIDTLKWWESFNDTSLNKLVK 66 L++GC+ P+Y KP + +P + G + + WW+ F+DT LN L Sbjct: 40 LVSGCSFAPDYHKPTAKDIKDMPVAYKEGGAWTSAQPADEAPRGAWWKIFDDTHLNDLED 99 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHR---------FIPNLKTN 115 + + + +A R ++ + VR+ LFPS +SIS + + P + + Sbjct: 100 RIEKNSPQLAEALARYQRSQAYVKEVRSGLFPSISVNSSISRQRVFRNPGSTYSPYIYSP 159 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S ++ D++G+ R +++ A +++ A + +L++ ++L +Y+ R + Sbjct: 160 SIAGGGISYEADIWGRIRNMVKAGKAMAEASAADMGSIRLSLQAELADNYMQLRGLDAQA 219 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + + Y + ++L+ + GA S + + + ++ + S++ + + H I+ Sbjct: 220 ALYRETVAAYMRALQLTVARHDGGAVSGVDVERARMQLSATRSELSQVMAHRALLEHAIA 279 Query: 235 TLLGYPATEFLHYMQKQSNNF--QP----NLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 L+G +Q +NF +P N I + P+ L+ RPDI E+++A + Sbjct: 280 VLIG-----------EQPSNFSIEPVDMINTPPVIPVSAPSQLLERRPDIASAERQMAAA 328 Query: 289 VAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKL-YLPIFDKGKIKSNIR 345 A IG A + +P++SL NG + + W+ GP + LP+F G+ ++ ++ Sbjct: 329 NAAIGSAIAAFFPTISLSANGGSDSAASSLLSAPSGFWALGPAMGVLPLFQGGRRRARVK 388 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + ++++TVL A +EVE+ + N + AV K++ +L+ I Y+ Sbjct: 389 EARADFDATAASYRDTVLKAFQEVEDQMALANWLANAHADQEFAVTAAKRANNLATIRYK 448 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G + L+++ + A + I + Q ++ V L A G G+ Sbjct: 449 EGAANYLEVVIAQTAELQNRRQALIIQTQRLQAGVGLIRAFGGGW 493 >gi|260752742|ref|YP_003225635.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552105|gb|ACV75051.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 496 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/465 (22%), Positives = 218/465 (46%), Gaps = 39/465 (8%) Query: 14 LLAGCTVGPEYTKP---HMPLLPTQFSIGNS----KNLINIDTLKWWESFNDTSLNKLVK 66 L++GC+ P+Y KP + +P + G + + WW+ F+DT LN L Sbjct: 40 LVSGCSFAPDYHKPTAKDIKDMPVAYKEGGAWTSAQPADEAPRGAWWKIFDDTHLNDLED 99 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHR---------FIPNLKTN 115 + + + +A R ++ + VR+ LFPS +SIS + + P + + Sbjct: 100 RIEKNSPQLAEALARYQRSQAYVKEVRSGLFPSISVNSSISRQRVFRNPGSTYSPYIYSP 159 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S ++ D++G+ R +++ A +++ A + +L++ ++L +Y+ R + Sbjct: 160 SIAGGGISYEADIWGRIRNMVKAGKAMAEASAADMGSIRLSLQAELADNYMQLRGLDAQA 219 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++ + + Y + ++L+ + GA S + + + ++ + S++ + + H I+ Sbjct: 220 ALYRETVAAYMRALQLTVARHDGGAVSGVDVERARMQLSATRSELSQVMAHRALLEHAIA 279 Query: 235 TLLGYPATEFLHYMQKQSNNF--QP----NLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 L+G +Q +NF +P N I + P+ L+ RPDI E+++A + Sbjct: 280 VLIG-----------EQPSNFSIEPVDMINTPPVIPVSAPSQLLERRPDIASAERQMAAA 328 Query: 289 VAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTHWSFGPKL-YLPIFDKGKIKSNIR 345 A IG A + +P++SL NG + + W+ GP + LP+F G+ ++ ++ Sbjct: 329 NAAIGSAIAAFFPTISLSANGGSDSAASSLLSAPSGFWALGPAMGVLPLFQGGRRRARVK 388 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + ++++TVL A +EVE+ + N + AV K++ +L+ I Y+ Sbjct: 389 EARADFDATAASYRDTVLKAFQEVEDQMALANWLANAHADQEFAVTAAKRANNLATIRYK 448 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G + L+++ + A + I + Q ++ V L A G G+ Sbjct: 449 EGAANYLEVVIAQTAELQNRRQALIIQTQRLQAGVGLIRAFGGGW 493 >gi|330819649|ref|YP_004348511.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] gi|327371644|gb|AEA62999.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia gladioli BSR3] Length = 493 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 216/459 (47%), Gaps = 34/459 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFNDTSLNKL-VKIAL 69 C+ P YT+P + + T +++ + WW F D L++L ++A+ Sbjct: 29 CSSLPAYTRPAVEVPATYAGAPAAQSGWRLAAPADAAPRGPWWTVFGDADLDRLEARVAI 88 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNST---------- 117 N T+ +A ++AA+ + RA P+ + A+ S I K S+ Sbjct: 89 S-NQTVQRAIAELDAARAAVDVQRAGFLPTVTAGATPSRGRISRNKAGSSLAGKTTTDYL 147 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + + W+ D+FG+ R + ++ A ++ A + KL + ++L Y R + + Sbjct: 148 GGIAASWEPDVFGRIRDSVANAQAGAQASAADLAAVKLAIGTQLATDYFTMRSLDTQQRL 207 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 ++ Y + ++L + GA ++ + A+ ++ + + H I+TL Sbjct: 208 LDDTVNAYGRALQLLEQQLADGAIDASAVAQARAQYETARTQASEIGAQRARLQHAIATL 267 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G A F + Q+ L +P I G+P+ L+ RPDI E+++A + A+IG+A Sbjct: 268 VGENAASFAIAPRVQA------LAVPRIPAGLPSQLLERRPDIAAAERRVAAANARIGVA 321 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P L L+ S L P + WS GP+L +FD G+ ++ + A + + Sbjct: 322 RAAFFPDLVLSASAGLESAAFAPWLSAPSLFWSLGPQLVGTLFDGGQRRATLHGATAQYE 381 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++TVL+A ++VE+ L+S++ + + A + S+ L+ ++ G S L Sbjct: 382 GAVADYRQTVLSAFQQVEDDLSSLHALADEASSARRAADAADLSLRLTTNRFQAGALSYL 441 Query: 413 DILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D++ + A A ++ I R++A + VDL A+G G+ Sbjct: 442 DVVTAQTIALADQQLVDQIDARRIAAA-VDLATALGGGW 479 >gi|158424912|ref|YP_001526204.1| RND efflux system outer membrane lipoprotein [Azorhizobium caulinodans ORS 571] gi|158331801|dbj|BAF89286.1| RND efflux system outer membrane lipoprotein [Azorhizobium caulinodans ORS 571] Length = 517 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/469 (22%), Positives = 214/469 (45%), Gaps = 42/469 (8%) Query: 17 GCTVGPEYTKPHMPLL----------PT---QFSIGNSKNLINIDTL--KWWESFNDTSL 61 GC VGP++T P P + PT + G S+ + L +WW+ F + + Sbjct: 34 GCMVGPDFTAPDAPRVNGYLPEGNPAPTATAEVHGGASQVFLRGRDLPGEWWKVFRNKQI 93 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTG- 118 + V A+Q + + A + AA+EN+L+ LFP S+ S + + + N N +G Sbjct: 94 DAFVTEAIQNHPDVAAAQAALRAARENVLAQEGSLFPQVSASGSGTRQVVSNASQNQSGN 153 Query: 119 ---------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + +D +G RR +E+ A + Q++ L++ + ++ + I Sbjct: 154 SSPYNLYNASVSVSYVLDAWGGTRRQVEALQAQAEYQQYQLEATYLSLTANVVTAAISDA 213 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + +I + I+ ++ ++L +F GA ++ ++ ++ + ++ +P L+K Sbjct: 214 SLRAQIDATNDIIKSEEEQLKLVQRQFELGAVAQSDVLSQQSNLAQTQATLPPLQKQLAQ 273 Query: 229 NVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKL 285 + + LG P+ + ++ S L +P + + +P+ L+R RPDI E L Sbjct: 274 QRNQLMAYLGRLPSEDRGEHVSLSS------LTLPRDLPVSLPSALVRQRPDIAAAEATL 327 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A +G+ +++ P + ++ G LT + F WS L +FD G + Sbjct: 328 HKATATVGVNVANMLPQIQISSSYGRNGLTPSSLFSPGTAAWSVAGSLSQTVFDGGTLYH 387 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE-LHKKSMSLSM 401 + A +S ++ + T++ TV++A ++V ++L +I D + K Q A E + S+ +S Sbjct: 388 DKEAAIASREQAFATYKSTVISAFRDVADSLRAIEADANTL-KAQLAYEKAAQDSVKISR 446 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G + +L E+ + + A+ Q L+ ++G G+ Sbjct: 447 TQYMAGAVTYPSVLTSEQNYQQAVIARVKAQAQRFSDTAALFQSLGGGW 495 >gi|330882827|gb|EGH16976.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 446 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 101/422 (23%), Positives = 194/422 (45%), Gaps = 34/422 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 W FND +L +L++ AL N + A I+A + R+DLFP S+ S + + + Sbjct: 16 WRHFFNDPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGTRQRV 75 Query: 110 PNLKTNSTGQLD-----------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 P ++ TGQ S +++DLFG+ R + E +L S+ +++++ Sbjct: 76 PADQSQ-TGQAGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFSSEEARRSTQISLV 134 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + +Y+ + KE + + L Y+++ L+ G +S L L + ++S + Sbjct: 135 ASVANAYMTWQADKELLKLTQDTLKTYEESYRLTSRSNEVGVSSALDLSQSRTAVESARA 194 Query: 218 DIPTLEKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + E+ + +++ LLG PA+ L ++ + G+P+DL Sbjct: 195 KLAQYERLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDL 244 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 ++ RPDI E L + A IG A++ +PS+SL S + F G + W F P Sbjct: 245 LQRRPDILEAEHTLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQP 304 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + +PIF+ G +++++ ++ + +++ + A +EV + L S + + + Sbjct: 305 SINIPIFNAGNLRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRD 364 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V ++ L+ YR G S L LD +R+ + L + S V+LY A+G Sbjct: 365 FVAANQDYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGG 424 Query: 449 GY 450 G+ Sbjct: 425 GW 426 >gi|152984852|ref|YP_001348229.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150960010|gb|ABR82035.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 474 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 100/425 (23%), Positives = 206/425 (48%), Gaps = 28/425 (6%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D +WW++F L+ L++ AL + + A R+ A+ + + A L P A++ Sbjct: 47 DIRQWWKAFGAPELDSLLQRALMNSQDLGAAVARVRQAQASAVIAGAPLLPELNATLGAS 106 Query: 108 FIPNLK------TNST----------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVD 150 L+ T++T L + +++D +G RR S+L +L ++ Sbjct: 107 RQKLLRGSGYSGTDATSDNDAVDSFSAGLSASYEVDFWGGRRAAYRSALESLKASEYDRA 166 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +L ++S + SY+ +E+ IA LD + + L + G+ + L + + + Sbjct: 167 TVELTLLSGVANSYLQLLALREQQRIARLNLDNAEHVLRLVETRHAAGSATALEVAQQSS 226 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + S +P LE+ + ++TL+G P + ++ F + G+P++ Sbjct: 227 LVASQRKQLPLLEQQTHEALITLATLIGEPVQD----LRVAERPFDSLRWPETGAGLPSE 282 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPK 329 L+ RPDI E +LA + A + +A++ L+P L+L+ S++ + + + + +++ G Sbjct: 283 LLGRRPDIANAEAQLAAAQADVQVARAALFPRLTLSASLSSGANRAADTFRSPYYNLGAN 342 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L PIF+ G+++++ R+ + +E T+++ +L A + E +L SI+ + + Q Sbjct: 343 LLAPIFNHGRLRADRDRSLARQEELLETYRKAILTAFADTERSLNSIDGIDRQLHWQQQE 402 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 +E +++ LS Y+ G +LL +L+ +R A V L +A+ Q + V LY A+ Sbjct: 403 LEQAQRAFDLSDSRYQAGAETLLTVLETQRTLYAAQDAAVQLRLARLQ---ASVGLYKAL 459 Query: 447 GSGYN 451 G G+ Sbjct: 460 GGGWQ 464 >gi|169797230|ref|YP_001715023.1| putative outer membrane protein precursor [Acinetobacter baumannii AYE] gi|88758886|emb|CAJ77824.1| putative RND family drug transporter [Acinetobacter baumannii AYE] gi|169150157|emb|CAM88051.1| putative outer membrane protein precursor [Acinetobacter baumannii AYE] Length = 497 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 118/452 (26%), Positives = 201/452 (44%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLK--WWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ WW F D LN+L Sbjct: 42 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDHWWTLFGDAQLNQL 100 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L SS S H F N +S L Sbjct: 101 VTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSM 160 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 161 SAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATA 220 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL Sbjct: 221 QQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 280 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 281 HEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATK 336 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP +K +I + ++ Sbjct: 337 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAI 396 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 397 IQYRQTLYQAFADVENALSSRTELDKQVAIQERNVELAEKTERLTEVRYRYGAVALKTLL 456 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 457 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 488 >gi|218130572|ref|ZP_03459376.1| hypothetical protein BACEGG_02161 [Bacteroides eggerthii DSM 20697] gi|217986916|gb|EEC53247.1| hypothetical protein BACEGG_02161 [Bacteroides eggerthii DSM 20697] Length = 452 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 99/440 (22%), Positives = 209/440 (47%), Gaps = 23/440 (5%) Query: 24 YTKPHMPLLPTQ---FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 Y++ H P L T+ + + NI L W E F D L L++ L++N + A Sbjct: 21 YSRYHRPDLSTENLYRDVPTDIDTTNIAPLSWREMFTDPKLQSLIETGLERNTDLNVARL 80 Query: 81 RINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHI 135 R+ AA+ +++ R PS + + + KT + G + W++D+FG+ Sbjct: 81 RVEAAEAALMTARLSYLPSLGLTAEGNANKHDGATAKTYNVGA-SASWELDIFGKLTAAK 139 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 + A L + A + +++ + SY +++I+++ L+ ++ + Sbjct: 140 RGAAAALQGSRAYRQAVQTQLVATIADSYYTLAMLDAQMTISNRTLENWRTTVRTLEALK 199 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G +++ +++ +A + +E+ + ++ KS + +S +L P+ H + + S+ Sbjct: 200 KVGKSNEAGVLQAKANVMRLEASLLSIRKSISETENALSAILAMPS----HSIGR-SDLA 254 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 + ++IG+P L+ NRPD+R E +LA + A++ YP+++L+G + T++ Sbjct: 255 EAAFPDTVSIGVPLQLLSNRPDVRQAEMELAQAFYATNAARAAFYPNITLSGILGWTNNG 314 Query: 316 SF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 PG W L P+F++G +N++ A+S +E + +++++LNA KEV Sbjct: 315 GGVIVNPG---QWLLNAIGSLTQPLFNRGVNIANLKIAKSRQEEAKLLFRQSLLNAGKEV 371 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 +ALT+ K + VE ++ + R + L++L +++ + EV Sbjct: 372 NDALTAWQTAKSQIEINARQVETLCDAVRKTESLMRHSNTTYLEVLTAKQSLLEAEVQQL 431 Query: 430 IAKRQLAKSYVDLYIAIGSG 449 + + +S + LY A+G G Sbjct: 432 QTRFERIQSIIKLYHALGGG 451 >gi|332978346|gb|EGK15071.1| outer membrane efflux protein [Psychrobacter sp. 1501(2011)] Length = 595 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 108/476 (22%), Positives = 223/476 (46%), Gaps = 48/476 (10%) Query: 8 FSLFIVLLAGCT------VGPEYTKPHMPLLPTQ-FSI-GNSKNLINIDTLKWWESFNDT 59 S V ++ C P +P++PL+P + + I GN++ ++ ++W + D Sbjct: 33 LSALTVAISACQSVPLADTNPVVARPNIPLMPGENYEIYGNNQVPSSLAAVRWQSFYTDP 92 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFI---PN 111 L L+++ L N + QA I A+ ++ P Y+ ++ I P+ Sbjct: 93 KLKALIQMGLDNNKDVKQAVLAIQKAQAQYRITDSNDAPNIGLNGDYSRGANNAIDRNPS 152 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + N G + +++D +G+ + + +L N S A D A++++I+ + SY++ + Sbjct: 153 DRYN-VGLGMASYELDFWGKIASLKDQALQNYLSTTAARDTAQVSLIANIAKSYVNLSYQ 211 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE-KSFRMN 229 ++++ +A L ++++ ++ + G SK L+A + + I L +S + Sbjct: 212 QKQLELAISTLQTREESLRITRARLEAGIDSKAP--SLQAAASAETARIAALNAQSGVLR 269 Query: 230 VHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------INIGIPADLIRNRPDIRYQ 281 N + L+G P S++ P +P ++ G+P+DL+R RPD+ Sbjct: 270 ARNALKFLVGAPI----------SDDMMPEPAVPSIASSTVLSAGLPSDLLRYRPDVLQA 319 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKG 338 E L + A I +A++ YPS+SL G++ + D+ F + WSFGP + LP+FD G Sbjct: 320 EYNLKAAGANIEVARAAYYPSISLTGNLGYSSDDLSGLFRSNGSSWSFGPSIKLPLFDAG 379 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKK 395 + +N A+ + ++ TV A KEV + L ++++ + +LQ E ++ Sbjct: 380 QRDANYEVAQIERDQAVANYESTVEAAFKEVNDVLADRATLDQRTQAEYRLQ---ENYQG 436 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S ++ L +LD +R+ + + +++ + ++LY +G G N Sbjct: 437 LFDISEARFKAQVDDYLAVLDAQRSLFSTQQSILNLEQERLNNQIELYQVLGGGAN 492 >gi|262045126|ref|ZP_06018155.1| cation efflux system protein CusC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037518|gb|EEW38760.1| cation efflux system protein CusC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 461 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 103/456 (22%), Positives = 210/456 (46%), Gaps = 25/456 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + W F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPVAPV-PQQFSLSQNKLVTATAGYQETGWRTFFVDPQVKSLIST 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD +P + S + LK ++T L+ Sbjct: 71 ALTNNRDLRMATLKVQEARAQYRVTDADRYPQLNGNGSTTYGGKLKGDTTTSSDYAAGLN 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 131 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAVAQLQVANDT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 191 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ + + + + ++ RPDI E L + A IG A++ + Sbjct: 249 --SYQHLPDDSASSAVDLQGVTLPPSLSSAILLQRPDILEAEHSLQAANANIGAARAAFF 306 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS++L S++ + +N W+F PK+ LPIF+ G+ ++N+ AE Q+Q + Sbjct: 307 PSITLTSSLSGSSSELSSLFNAGGAMWNFIPKIELPIFNAGRNQANLDLAEIRQQQQVVN 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A KEV +AL + Q + ++ + YR G S +++L Sbjct: 367 YEQKIQSAFKEVADALALRQSLADQIAAQQRYLASLNITLQRATALYRHGAVSYIEVLSA 426 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 427 QRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|225423392|gb|ACN91214.1| CmeC [Campylobacter lari] Length = 487 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 34/472 (7%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N+ + I + L+ C++ KP++ + ++ +N I+I+ +WW++F+D L Sbjct: 7 NMHKLIVLVSCFLITACSL-----KPNLEIKDVNYTKSLDQN-ISINK-QWWKTFDDNYL 59 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------PNLKTN 115 N LV+ AL+ N + A + A E + R+DL P S S P+ K+N Sbjct: 60 NILVEQALKNNNDLQIAYINLQKAYEALGIARSDLLPKLDGSASGARAKTSINAPSNKSN 119 Query: 116 S-------TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L+ +++DL+G+ R +S A L ++ + A+L++IS ++ +Y + Sbjct: 120 DFVYGNDFNMGLNLSYEVDLWGKYRDGYGASKAKLQASEFDYESARLSLISNVVKTYFNL 179 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E++ I + Y+K EL F G S+ L K +AE+++ + + Sbjct: 180 ASLSEQVKILEETTQSYQKTYELKLEHFKLGVISEYELNKFKAELENSRVLLTNAKIQKE 239 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 N + L + L+ + Q L IP GI ++++ RPD++ K L + Sbjct: 240 ANTKALKILTSNDIDDILYNSIEYKKIGQYELSIP--EGIGSEILLQRPDVQASLKILEE 297 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 +G+A++ P+LSL G + ++ G NT W+ +PIF G+I +N Sbjct: 298 KNYLVGVARTAFLPNLSLTGLLGFQSNDLDLLVKHGSNT-WNVAGNFAMPIFHWGEIMNN 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLS 400 + A+ + E ++ ++ T+ A E+ AL S E+++ L A K +S Sbjct: 357 VNIAKLTKDEAFLQYENTLKTAFGEIRLALFNRQSYYENEQNYKNLFLA---QSKIYEIS 413 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y G +L D L +R ++ + + +LA S VD+ A G G+N Sbjct: 414 TLRYENGMINLADFLQDQRNYLNAKLSYTNSSYELANSIVDVMKAFGGGFNA 465 >gi|167589862|ref|ZP_02382250.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 498 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 105/467 (22%), Positives = 205/467 (43%), Gaps = 34/467 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIG----------NSKNLINIDTLKWWESFNDTS 60 +V LA C++ P Y +P P+ P+ + G +N L W + F D Sbjct: 6 LVVALAACSMEPTYQRPDAPI-PSAYPSGPAYSTPGANAGQQNGPAAADLGWRQFFVDPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPNLK---- 113 L +L+ AL N + AT I+AA+ RA FP A++ S R P L+ Sbjct: 65 LQQLIARALANNRDLRIATLNIDAARAQYRLQRAAQFPEIDANLGLNSQRLSPGLRAPGQ 124 Query: 114 -----TNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYID 166 T + G ++++IDLFG+ R + + L + AQ + +++++++ +Y+ Sbjct: 125 SPLINTFAAGVGLTNFEIDLFGRVRSMSHAAQEQYLATVEAQRSV-HISLVAEVGNAYLT 183 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E + +A L + + H G ++L + + ++++ + + + Sbjct: 184 LMADRELLKLAQDTLKNQQDVAAMIHRGKLAGGMAQLDEHRADTQVQTAQVAVEQYTRQV 243 Query: 227 RMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ L+G P + N ++ G+P+ L+ RPDI E +L Sbjct: 244 AQDENALTLLIGGGPLPAGVTNAMPLGNQ---HVLAEFPEGLPSTLLERRPDIMAAEHRL 300 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P ++L G + + T F G W F P+L +PIFD G+ + Sbjct: 301 MAANANIGAARAAFFPRITLTGMLGVASATLAGLFSG-GAAWLFAPQLTMPIFDGGRNSA 359 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A ++ T+ +A +EV +++ + ++ V Q + ++ L+ + Sbjct: 360 NLDLATVEKDVNVANYERTIQSAFREVADSMAARTTFEREVNAQQKMIHDISETQRLAQM 419 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ G + D +R + + L K S V LY A+G G Sbjct: 420 RFQNGVDDYFGVFDAQRQLFQAQQLLVTYKLAGLTSRVTLYKALGVG 466 >gi|332308129|ref|YP_004435980.1| RND efflux system, outer membrane lipoprotein, NodT family [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175458|gb|AEE24712.1| RND efflux system, outer membrane lipoprotein, NodT family [Glaciecola agarilytica 4H-3-7+YE-5] Length = 481 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 118/479 (24%), Positives = 223/479 (46%), Gaps = 51/479 (10%) Query: 1 MNILRAIFSLFIVLLAGC-TVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWW 53 MNIL +L +LAGC T+ P+Y + +P+ P S G S + W Sbjct: 6 MNILPIAGAL---ILAGCSTLAPDYARTELPVPNTWQEQPDAQSKGISSEFAQ--QVPWK 60 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 + D L KL+++AL N ++ + + +A+ R+DLFP AS+S N Sbjct: 61 DFIKDQRLAKLIELALDSNRSLRETLADVESARATYRIQRSDLFPQIDASLSG----NRT 116 Query: 114 TNSTGQLD---------SDWKIDLFGQRR-----HIESSLANLDSAYAQVDIAKLNVISK 159 STG + S ++IDLFG+ R +E+ LA+ ++A A A++ +I + Sbjct: 117 KTSTGDITTLYEAEAGLSGYEIDLFGKNRSLTQAQMEAYLASAETAKA----AQIALIGE 172 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +++ +S+A + +K +++++ + G S++ + E ++ SDI Sbjct: 173 IANAWLTLAADSNLLSLAKETAANAQKTMDITNKRLELGVDSRIDVASAETIYQTARSDI 232 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + + + L+G +F + + +L + G+ + ++ RPD+ Sbjct: 233 ASFTTQVSQDKNALRLLVG---EQFEDSLLAGALPQSESLINDVPAGLSSSVLLARPDVL 289 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIF 335 E L + A IG A++ +PS+SL + L D G ++ W+ P + LPIF Sbjct: 290 AAEHDLKSANANIGAARAAFFPSVSLTATGGLASSVLSDIFSGGASSIWTLAPSISLPIF 349 Query: 336 DKGKIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVE 391 + G+ ++N+ +++ QE+Y+ ++ + +A EV + L +I+E L V Sbjct: 350 NGGENEANLAYSKAQ-QEKYLAAYEYAIQSAFSEVADVLARRATIHEQLDAQASL---VA 405 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-YVDLYIAIGSG 449 +S LS+ Y+ G S + L+ +R L I+ RQ+ S ++LY +G G Sbjct: 406 AATRSYELSLARYKNGVDSFQNALEAQRTMYSASQSL-ISTRQVDLSNRINLYRVLGGG 463 >gi|206562171|ref|YP_002232934.1| outer membrane transport system protein [Burkholderia cenocepacia J2315] gi|198038211|emb|CAR54164.1| outer membrane transport system protein [Burkholderia cenocepacia J2315] Length = 498 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 115/456 (25%), Positives = 211/456 (46%), Gaps = 28/456 (6%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL-INIDTLKWWESFNDTSLNKLVKIALQQ 71 LL+GC ++ P P P+ F +++++ I W++ F D L L+ AL Sbjct: 29 LLSGCLSLAPPDELPATPIA-AAFPDPSARSVSIAQAPPAWYDYFVDVRLRALIGQALAN 87 Query: 72 NLTILQATERINAAKENILSVR-ADLFPSSYASISH-RF-IPN---LKTNSTGQL----- 120 N + A R+ A+ + +R AD +P+ A ++ RF P GQ+ Sbjct: 88 NRDLRAAVARVEQARA-VYGIRSADQWPTIGAGAAYVRFRTPGGFLTPAPVIGQVYEVQL 146 Query: 121 -DSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ++ W+ID +G+ R++++S L ++ A L+VI+ + +Y+ ERI++ Sbjct: 147 AETQWEIDFWGRVRNLKASALQRYLASDAARQAVTLSVITSVADAYLTLCELDERIALTR 206 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 +D +++ + L+ GA S+L L + E ++ ES L+++ + ++ L+G Sbjct: 207 ATIDSRHESLRIFQLRHAAGAISRLDLTQSEILLQQAESLGVQLQQARASAANALALLVG 266 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + P+L G+P+ L+ RPD+ E +L + A IG A++ Sbjct: 267 ATPALADAPLTLDDGAVTPSL----APGLPSSLLARRPDVIAAEHELQATRANIGAARAA 322 Query: 299 LYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +P ++L +GS AL HD G WS P + LP+ D G+ +SN+ A + E Sbjct: 323 FFPRIALTSAIGSGSTAL-HDLLSSGTGV-WSVIPNVTLPLVDGGRNRSNLALAHAQRDE 380 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++T+ A ++V +AL + V + + + L+ + Y G L+ Sbjct: 381 ALAQYEKTMQRAFRDVSDALAARYWLADQVAIERATLASQAERARLAKLRYDSGATRFLE 440 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R E + +R L S V LY A+G G Sbjct: 441 VLDAQRDLMNAEQQWVMTRRALLSSRVALYGALGGG 476 >gi|4139248|gb|AAD05185.1| unknown [Burkholderia pseudomallei 1026b] Length = 541 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 107/461 (23%), Positives = 207/461 (44%), Gaps = 35/461 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 265 LVGEPAPTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 319 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 379 Query: 353 EQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + ++ VL A ++VE+ L S I E + +V + AVE + S+ +++ Y+ G Sbjct: 380 QDVAAYRAAVLYAFQDVEDNLASQRILEQEIVVQR--QAVESAQHSLDITLNQYKAGTVG 437 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 438 YLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 478 >gi|299069524|emb|CBJ40793.1| putative outer membrane drug efflux lipoprotein, RND efflux system domain [Ralstonia solanacearum CMR15] Length = 511 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 102/393 (25%), Positives = 187/393 (47%), Gaps = 33/393 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYA 102 WW+ FND +L+ L A + + T+ A R+N A+ + S RA LFP A Sbjct: 83 WWKLFNDATLDNLEAQAGEASPTLAAAAARVNQARAIVQSNRAALFPELDAGFGPTRQRA 142 Query: 103 SISHRFIP-----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S + +P +T Q ++ DLFG+ R + ++ A+ + A A+L++ Sbjct: 143 SAASAGLPVGAPVQPQTYWRAQATVSYEADLFGRVRNSVNAADADAERVEALYRAARLSL 202 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y R ++ + + ++ ++L +F+ G +L + + +AE+ + Sbjct: 203 QADVAQTYFSLRTLDAEEALLARTVVGREEALKLVQRRFSTGDIGELDVARADAELATAR 262 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 SD + + + H ++TLLG + F L Q+ N + + G+P+ L+ R Sbjct: 263 SDRLDVARRRALLEHALATLLGKAPSGFTLGADPLQAAN------VRVPPGLPSALLERR 316 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THD--NSFPGYNTHWSFGP---- 328 PD+ E+ +A + A+IG+A++ +P L L G +HD + + W GP Sbjct: 317 PDVAAAERAMAAANARIGVARAAFFPQLQLTGGFGFESHDLGDLLKWSSRTWLLGPLVGT 376 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKL 386 L LPIFD G + +++A ++ +E ++E VL A +EVE+ L+ + D+ V Sbjct: 377 ALSLPIFDGGARSAGVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQSKVQD- 435 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 AV ++ LS Y G + D++D ER Sbjct: 436 -DAVRASTRAAQLSRTRYNAGSVNYFDVIDAER 467 >gi|317402008|gb|EFV82607.1| NodT family RND efflux system [Achromobacter xylosoxidans C54] Length = 332 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/303 (23%), Positives = 151/303 (49%), Gaps = 6/303 (1%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++ V +++ +Y + R ++R+++A L+ + ++ + + G + L AE Sbjct: 27 ARIVVAAEVARNYFELRGAEQRLAVARANLESQRDSLRVIQAMVSAGRGDEGDLASARAE 86 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++++++ +P E + R+ ++ ++ L G E + + Q L + IG L Sbjct: 87 LETVQASVPLQETARRLALYRLAVLAGLRPAEL---GELDAATPQAPLAARLPIGDVGAL 143 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGP 328 + RPD+ E+ +A + A +G+A ++LYP + L G +AL + + +S P Sbjct: 144 LARRPDVLAAERNMAAANADVGVATAELYPRIDLGGFLGFVALRGADFGSASSRAFSVAP 203 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + P F + R A++ +Q + +++TVL A++E+E ALT + ++ + L Sbjct: 204 GVNWPAFHLPTALARKRAAQARSQGEVARYEQTVLQAVEELEGALTQYGQTQQRLGNLAQ 263 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A ++ L+ + YR+G L +LD +R + + +++A+ S V LY A+G Sbjct: 264 AAAHSGRAAELARLRYREGSAPYLTVLDAQRTQLRAQDAVAVAETASYTSLVALYKALGG 323 Query: 449 GYN 451 G+ Sbjct: 324 GWE 326 >gi|212635228|ref|YP_002311753.1| outer membrane efflux protein [Shewanella piezotolerans WP3] gi|212556712|gb|ACJ29166.1| Outer membrane efflux protein [Shewanella piezotolerans WP3] Length = 491 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 207/474 (43%), Gaps = 39/474 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIG----NSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++L+GC VGP+YT+P L G + WW+SF D +LN+LV A Sbjct: 13 MMLSGCAVGPDYTQPTSTLETEYLYQGVQGTQAGQYAEQTDNAWWKSFEDPTLNQLVLDA 72 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS------------------------SYASI 104 Q + + A +RI A+ ++ + P+ + + Sbjct: 73 QNQAIPLKIAAQRIRMAQSYQSTIESFKVPTVNIGAGFGNFQISENDPLLGGAITAKHPV 132 Query: 105 SHRFIPNLKTNSTGQLDSD---WKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISK 159 S + ++ N++ W++DLFG+ R+ +++ + + L + S Sbjct: 133 SGEELGLVEDNNSAFFVGATIAWEVDLFGRIDRQASAAAIRKEQMVIMREGLTTL-ITSD 191 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +I +Y+ R +ER IA + D K +EL L G SKL + +A + + ++ I Sbjct: 192 VIHNYLQMRGAQERKKIALKTSDDQSKTLELVKLMVKSGYGSKLDESRAKAALAATKAVI 251 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 P LE + +++ ++ LLG + H KQ PN I G+PADL+ RPDIR Sbjct: 252 PQLEIAENVHLQRLAILLGETPKQS-HSRFKQDEPL-PNFSGIIPTGLPADLLERRPDIR 309 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+++A + A + YP + L G+ +A D+ F + W + +FD Sbjct: 310 IAEREMAALNEERAAAIAAQYPKVFLTGAPGVLAKDFDDLFNSDSVSWLGSVGVSWNVFD 369 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ + + E+ +++Q +V+ A EVE L + ++ V + A + Sbjct: 370 GGRGDAIVEMQEARFDASVLSYQHSVIAAFGEVETLLHGYGQSQQYVALVSEASAETTNA 429 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + Y+ G L ILD +R + + AK Q A + L+ A+G + Sbjct: 430 VNKAQSLYKAGLSDYLSILDAQRQQNMMRDRVVAAKLQTANMTIALHKALGGNW 483 >gi|307546839|ref|YP_003899318.1| hypothetical protein HELO_4249 [Halomonas elongata DSM 2581] gi|307218863|emb|CBV44133.1| putative outer membrane protein [Halomonas elongata DSM 2581] Length = 468 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 104/449 (23%), Positives = 213/449 (47%), Gaps = 30/449 (6%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC + P P LP Q+ + ++ +WWE F ++LV AL N + Sbjct: 18 SGCAMSSGLNAPS-PELPAQWLNQQQASRAMVEHPRWWEQFGS---DRLVAQALDANTDL 73 Query: 76 LQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNS-TGQLDSDWKIDLFG 130 L A R+ A + A LFPS + AS + + S +L++ +++DL+G Sbjct: 74 LAAAARVEQADARLAQAGASLFPSLGLNAGASRNGTIGAGGSSESYEARLNASYEVDLWG 133 Query: 131 Q-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 R +++ A+L ++ + +L V++ ++ +Y+ R+ ++ +++ L L ++ ++ Sbjct: 134 ALRNSRDAAKASLLASRFDRETVRLTVLASVVDTYLQVRYLEDSLALTEDNLRLAERLLD 193 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 K GA S L + + + + + +P L + R + + ++ L+G F Sbjct: 194 QVRAKVENGAVSPQDLAQQKTVVANARARLPDLRQQLRQSRYALAVLVGEMPQGF----- 248 Query: 250 KQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 + L +P I G+P ++ RPDI + L + ++ A++D +PS++L GS Sbjct: 249 RVDGGELTALTLPDIQPGLPDQVLARRPDIAQAQASLMAADHQVAAARADYWPSITLTGS 308 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLP--IFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 + + + + L LP +FD G ++ I +A ++ +EQ + T+L A+ Sbjct: 309 GGYSSSDLSSLLSGDALYNLALSLPQTLFDGGARQARIDQARAAWEEQRAGYTGTLLTAL 368 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMS---LSMINYRQGRYSLLDILDIE---RA 420 +EV+ AL ++ + + + Q+ E ++++ ++ I YR+G L D+L+ + + Sbjct: 369 QEVDQALGNV---QALADQQQYRDEAYRQAEEAYRIARIRYREGATELTDVLNAQSSFNS 425 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +DL + Q S V LY +G G Sbjct: 426 ARQSRLDLLYDQYQ---SRVTLYRVLGEG 451 >gi|323164009|gb|EFZ49817.1| cation efflux system protein cusC [Shigella sonnei 53G] Length = 398 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 30/408 (7%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN----- 115 + L+ AL N + AT ++ A+ AD +P S + NLK N Sbjct: 1 MKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTR 60 Query: 116 --STGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 STG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + Sbjct: 61 EFSTG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAY 118 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ IA + L Y+++ + G+++ L+L + I+S SDI + + Sbjct: 119 AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN 178 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LLG + Q Q+ N + + G+ + ++ RPDI E L + A Sbjct: 179 ALQLLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANAN 234 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 235 IGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAE 294 Query: 349 SSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 Q+ + +++ + NA KEV +AL S+N+ ++ Q + + ++ + Y+ Sbjct: 295 IRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQ---ISAQQRYLASLQITLQRARALYQ 351 Query: 406 QGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L++LD ER AT + +DL+ A RQ+ + + LY A+G G+ Sbjct: 352 HGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGGGW 396 >gi|206561852|ref|YP_002232617.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198037894|emb|CAR53838.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 523 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 111/477 (23%), Positives = 209/477 (43%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 VLLAGC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 23 VLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYNDPQLDALIG 80 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTN--------- 115 N TI Q+ A+ + RA FP+ AS S P + Sbjct: 81 KLNASNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRARTPRTSLSSGSSSNFGS 140 Query: 116 ----------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y Sbjct: 141 GSTGSINNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTY 199 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES---DIPT 221 R + + Y+++++L+ ++ QG ++ +++ + +++S ++ D Sbjct: 200 FQLRTSDALQKLLDDTVQSYQRSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAQIDNGV 259 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI---PIN-IGIPADLIRNRPD 277 + H I+TL+G PA+ F + PN PI + +P+ ++ RPD Sbjct: 260 ARAQYE---HAIATLIGEPASTF---------SLPPNPLAAEPPITPVDVPSAILERRPD 307 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPI 334 I E++ A + +IG+A + +P+L+L+ + F W+ GP+L + Sbjct: 308 IAAAERRAAAANEQIGVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATL 367 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G + A ++ + ++ VL A ++VE+ L S + + + AV+ + Sbjct: 368 FDAGLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQRQAVDSAE 427 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++ Y+ G + L++L + + L+ Q S V L A+G G+N Sbjct: 428 HALAIVTNQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWN 484 >gi|187919449|ref|YP_001888480.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187717887|gb|ACD19110.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 502 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 112/431 (25%), Positives = 188/431 (43%), Gaps = 43/431 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 L VL GCTVGP+Y +P + LP + D WW FND +++ Sbjct: 21 LSAVLTGGCTVGPDYHRPPVATPAAWKELPGWTEAQPAAEAPKGD---WWTGFNDPLMDE 77 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQ 119 + N T+ Q+ A + R+ LFP+ A+ S N + S G Sbjct: 78 FEPLVSVSNQTVRQSYANYQQALAEVRLARSALFPTIGVTGSATRSRSSTGNFSSGSLGG 137 Query: 120 L-----------------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L ++ W DL+G RR+IE S A ++ A + A L+ L Sbjct: 138 LAGASSFQRINNAGSLEANASWAPDLWGLVRRNIEESAATAQASQATLANATLSEQIALA 197 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + ID R I + +D +++++ + + G LV + +++S +S + Sbjct: 198 NAIIDLRVTDANIDLLTHTVDAFQQSLRVVAEQDRAGTVPPSDLVSAQTQLESAQSSLIA 257 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRY 280 L + NVH I+ L+G E L Q N P L IP++ +P+ L++ RPDI Sbjct: 258 LGVARAQNVHAIAVLVGKNPEE-LDIAQ---NTTLPTLPSIPVS--VPSTLLQRRPDIAA 311 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFD 336 E+++A A IG+A + YP++SL+ T + G N WS G + +FD Sbjct: 312 AERQMAAQNAAIGVAVAAYYPTISLSALDGFTQ-SPLAGLLHIGNYVWSLGGQATETLFD 370 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ + + A++S + +++ TVL A + VEN L + + L+ AV + Sbjct: 371 GGQRSAQVDAAKASYEAAVASYRGTVLTAFQGVENDLAGLRILAQQSEVLERAVRDATRG 430 Query: 397 MSLSMINYRQG 407 ++ Y+ G Sbjct: 431 TEIARNEYQAG 441 >gi|332185002|ref|ZP_08386751.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332014726|gb|EGI56782.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 486 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 109/460 (23%), Positives = 198/460 (43%), Gaps = 33/460 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C + P+Y +P P+ T G + W E F D L + AL N + Q Sbjct: 21 CNLAPQYRQPVAPVSATYPEAGAGTR--TAAEIGWREFFADEQLKAYIAAALANNRDLAQ 78 Query: 78 ATERINAAKENILSVRADLFP--SSYASISHRFIP-------------NLKTNST----- 117 A R+ A+ A P AS S IP N T Sbjct: 79 AVARVAQARAQYRIQDAQRLPPLDLSASASRTRIPLNSLGFGNALPGGGDAQNPTSITYN 138 Query: 118 ----GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKE 172 G S +++D +G+ R++ + A + + A +L+++ ++ +Y+ R +E Sbjct: 139 QFALGARVSSFELDFWGRVRNLAEAQRRQYLATVEAERAFRLSLVGQVAATYLQIRAAEE 198 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +I++A + + ++ + ++ + G TS + + A + E+ + L ++ + + Sbjct: 199 QIALAERTVASRREGLGIAKRRMDAGVTSSVDYDQAAALLTQAETQLAELRRTVAQSQNL 258 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ L+G P T L ++ + N + I G+P+ L+ NRPD+ E++L + A I Sbjct: 259 LTVLVGGPITGPLPAGRRLGDQ---NQFAAIEPGLPSALLVNRPDVLQAEQQLLAANANI 315 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ PS+SL G N G + + LPIFD G+ + +R + + Sbjct: 316 GAARAAFLPSISLTGLAGFVSPALRNLIDGNSQQYQVQGAALLPIFDWGRRNAQLRLSRA 375 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 A E +Q TV A +EV +AL + + + AVE ++ + + Y G Sbjct: 376 QADELTAAYQRTVQGAFREVADALVARRRFAEQIEAQTRAVEAQRRLARTARLRYNNGIS 435 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++LD ER E L + ++ V LY+A+G G Sbjct: 436 IYLEVLDAERNLFSAEQQLLTLRSSALQNDVTLYVALGGG 475 >gi|260172745|ref|ZP_05759157.1| putative multidrug resistance protein [Bacteroides sp. D2] gi|315921034|ref|ZP_07917274.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694909|gb|EFS31744.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 458 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 109/455 (23%), Positives = 217/455 (47%), Gaps = 37/455 (8%) Query: 15 LAGCTVGPEYTKPH--MP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + +Y KP +P L + ++ +L N+D W E F D L L+++ LQ Sbjct: 19 LSGCGIYTKY-KPATVVPDHLYGEEVVAEDTASLGNMD---WRELFTDPYLQSLIEVGLQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWK 125 N A R+ A+ ++S + P+ +A + + T+ Q + + W+ Sbjct: 75 TNTDYQSAQLRVEQAQAALMSAKLAFLPA-FALSPQGTVNSFDTHKATQAYSLPVTASWE 133 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQIL 181 +D+FG+ R+ + L YAQ + + V ++LI +Y E++ ++ Q Sbjct: 134 LDVFGRMRNAKKQAKAL---YAQSEDYRQAVRTQLITGIANTYYTLLMLDEQLDLSRQTE 190 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 +K+ + + G ++ ++ ++EA ++S + L++ ++++ LL Sbjct: 191 TAWKETVASTRALMNAGLANESAVSQMEAAYYQVQSSVLDLQQQISQVENSLALLLAETP 250 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + M + F +L +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 251 RNYERGMLAK-QQFPTDL----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 305 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 306 SITLSGSAGWTNSAGSLILNPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 364 Query: 358 WQETVLNAIKEVENALTS--INEDKKIVTKLQHA-VELHKKSMSLSMINYRQGRYSLLDI 414 +Q+T+LNA EV +AL + ++ K+++ Q A ++ +S SL M G + L++ Sbjct: 365 FQQTLLNAGSEVNDALIAYQTSQGKRLLLDKQIASLQTALQSTSLLM---EHGNTTYLEV 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++ V++ + +S ++LY A+G G Sbjct: 422 LTARQSLLSVQLSQTANHFTEIQSLINLYRALGGG 456 >gi|158425617|ref|YP_001526909.1| outer membrane efflux family protein precursor [Azorhizobium caulinodans ORS 571] gi|158332506|dbj|BAF89991.1| outer membrane efflux family protein precursor [Azorhizobium caulinodans ORS 571] Length = 494 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 125/467 (26%), Positives = 214/467 (45%), Gaps = 37/467 (7%) Query: 5 RAIFSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 R + F + L AGC PE T P LP+ ++ + L DT WW +F D +L+ Sbjct: 41 RGVSCAFGLALFTAGCAALPETTA-EAPALPSAYAAADVP-LARRDTGHWWRTFRDPALS 98 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------LKTN 115 +LV A+ QNL++ QA R+ AA+ + P++ A + N L+ Sbjct: 99 RLVDQAMDQNLSVAQARARLTAARAQAAAANTLFLPTAGAGGTAIATTNPSETDDPLRRP 158 Query: 116 STGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 D W + LFG + S+ A+ A ++ +++V +++ +YI R +++ Sbjct: 159 LMAGFDMSWDVGLFGLAENANRSATASAAIVAADLESVQISVTAEVARAYIMLRAVQQQH 218 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES---DIPTLEKSFRMNVH 231 IA L+ +K +L + G + + + ++ D+ S R+ Sbjct: 219 VIARAALEARRKRSDLVQTRIRTGLAALGEEAEAALALAEAKAELADLDARAASLRLQ-- 276 Query: 232 NISTLLGY----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 I+TLLG PA E + QP + PADL+R RPD+R E+++ Sbjct: 277 -IATLLGSATPDPALE--------TAGPQPMPAEGLPASHPADLLRARPDVRAAEQRVLR 327 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIR 345 + A+ GIA SDLYP L L G+I P N+ + GP L +P+ D G+ ++N+ Sbjct: 328 ASAEAGIALSDLYPKLRLVGTIG----AGAPFTNSAFGVAGGPVLQIPLLDYGRREANLT 383 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 ++ +E +++TVL+A KE +AL +++ +K VT + AV ++ + + Sbjct: 384 ARKAQVEEAEAAYRQTVLDAYKEASDALAALSASRKAVTGQKAAVAAAAQTERSARVLSS 443 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +G + + E A L A+ A + V LY A+G G P Sbjct: 444 EGLADRARLWEAETALLDRRRRLVQAQEVEAVALVALYKALG-GAAP 489 >gi|329963724|ref|ZP_08301170.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|328527734|gb|EGF54726.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 468 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 100/427 (23%), Positives = 199/427 (46%), Gaps = 30/427 (7%) Query: 39 GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 G+S NL + + W E F D L L++ LQ N A R+ A+ +LS + P Sbjct: 54 GDSLNL-GLGGMDWHELFTDPHLQALIEQGLQNNTDYQSAQLRVEEAEAALLSAKLAFLP 112 Query: 99 SSYASISHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQV---- 149 S +A + + ++ Q + + W++D+FG+ R+ + L YAQ Sbjct: 113 S-FALAPQGTVSSFDSHKATQTYSLPVTASWELDIFGRMRNAKKQSKAL---YAQSRDYH 168 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + +I+ + +Y E+++I+ Q + +K+ + + G ++ ++ ++E Sbjct: 169 QAVRTQLITGIANTYYTLLMLDEQLAISKQTEETWKETVASTRALMNAGLANESAVSQME 228 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A +++ + LE+ ++++ LL A HY ++ + +IGIP Sbjct: 229 AAYYQVQASVLDLEEQINQVENSLALLL---AETPRHY--ERGVLAEQQFPADFSIGIPV 283 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWS 325 ++ RPD+R E+ L + A+S YPS++L+GS T+ PG + Sbjct: 284 QMLSCRPDVRSAERTLEAAFYGTNAARSAFYPSITLSGSAGWTNSAGSMIVNPGKFVASA 343 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KI 382 G L P+F +G++ + R A + +E + +Q+T+LNA EV +ALT+ + ++ Sbjct: 344 IG-SLTQPLFARGQLIAQYRIARAQQEEASLAFQQTLLNAGSEVNDALTAWQTSRSKSEL 402 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + K +++ +S SL M G + L++L + ++ + + +S ++L Sbjct: 403 LDKQVASLQTAARSTSLLM---EHGNTTYLEVLTARQTLLSAQLSQTANRFSEIQSLINL 459 Query: 443 YIAIGSG 449 Y A+G G Sbjct: 460 YKALGGG 466 >gi|332995616|gb|AEF05671.1| RND efflux system, outer membrane lipoprotein, NodT family [Alteromonas sp. SN2] Length = 475 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 101/451 (22%), Positives = 212/451 (47%), Gaps = 23/451 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPL-LPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 I + GC+ + + +P F S + I D W ++FND L+KL+ L Sbjct: 32 ICFIIGCSTNGSHQPATTDINIPKDFKSSAAPRQAIQSD---WLKTFNDPYLDKLISEVL 88 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS-------HRFIPNLKTNSTGQLDS 122 N + A ++++A A L P+ + + + ++N LD Sbjct: 89 TNNFDLQIAAAKVDSAAAAARQAGASLTPAVNLGLQTTDRGRVEGSLSDSESNVGASLDI 148 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D++G+ R +++ L ++ + AKL++ ++ +Y A ++S+A + Sbjct: 149 SWELDVWGRIRAGRDAATEELQASTLDYEYAKLSLAAQTAKAYFLAVETGRQVSLAEDTV 208 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YP 240 + K +E++ F +G + +++ S E+ + L ++ + ++ LLG YP Sbjct: 209 ANFDKTVEIASAFFDEGMVGIQDVHLAKSQKASAEASLENLRVAYSDTLRSLEALLGRYP 268 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + E + + P L +P+ G+P++++ RPDI E+++A + K AK+ Sbjct: 269 SAEV------EIADALPALPVPVPAGVPSEVLERRPDIVAAERRVAAAFKKTQQAKAAKL 322 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P L+L S+ T + N + W+ L PIFD G + + + A ++ ++ Sbjct: 323 PKLALTSSVGGTGGSLSDAVNPNNMIWNVVTNLMFPIFDGGSLDAQLEAATANQKQALAN 382 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +Q+T L+A ++E+AL++ +K + L+ A E +++ + Y+ G +LLD+ + Sbjct: 383 YQKTALSAFVDIESALSNETSLRKQIINLRSAYEEAERAEKIGWETYQSGEGNLLDVQQL 442 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +R+T L + +L ++LY+ +G Sbjct: 443 QRSTISALSTLLNTEHELFVQRINLYLGLGG 473 >gi|291617082|ref|YP_003519824.1| OprM [Pantoea ananatis LMG 20103] gi|291152112|gb|ADD76696.1| OprM [Pantoea ananatis LMG 20103] Length = 479 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 106/485 (21%), Positives = 212/485 (43%), Gaps = 55/485 (11%) Query: 1 MNILRAIFSLFI-VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWE 54 M + +F++F+ LAGC ++ P Y +P + T + NL +N ++W + Sbjct: 1 MTMTAKLFTVFLPCFLAGCVSLDPHYDRPVDAVKATNPTGEAYPNLQGTAVNYRAIRWQD 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-- 112 D+ LN++V +AL + + +A + +A RADLFPS A +S L Sbjct: 61 YVLDSQLNQVVGMALDSSRDLREAVASVKSAHAQYAEQRADLFPSLSAGVSGTRSRALTG 120 Query: 113 KTNSTGQLDS--------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISK 159 + N T +S +++DLFG+ R+ E+ L L+ A + +L V+ Sbjct: 121 EGNQTALGNSYSAEGSVSAFELDLFGKNQSLSRQQYETYLGTLEGARS----TRLTVLYN 176 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 I ++ + ++IA + + +++++++ + G S + + E +S ++D+ Sbjct: 177 TIDYWLQLAADRSNLAIAKETAESARQSLDVTRKRMQNGVDSMVDVASAETTYQSAQADV 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI------------GI 267 + S + + + ++G P P+ +P N+ GI Sbjct: 237 ASYTTSVAQDKNALDLVVGKPV---------------PDTLLPQNLESIGHALRDVPAGI 281 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHW 324 +D++ NRPD+ E L + A IG A+++ +PS+SL S + + F W Sbjct: 282 SSDVLNNRPDVLQAEHNLKAANANIGAARANFFPSISLTASGGVGSADLASLFKNGVGIW 341 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF P + LP+F G + + ++ + ++++V A +EV +AL +T Sbjct: 342 SFSPSISLPVFKGGYNVAYLNYTKAQKEYYVAAYEKSVQTAFREVADALARRGTINDQLT 401 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ V + L+ + Y+ G + L+ L +R L ++ ++ Y Sbjct: 402 SQRNNVAASQIYAHLADLRYQSGVDTWLNALTAQRTLYSARTRLVSVEQAYYQNLNTFYK 461 Query: 445 AIGSG 449 +G G Sbjct: 462 VMGGG 466 >gi|222824538|ref|YP_002576112.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter lari RM2100] gi|222539759|gb|ACM64860.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter lari RM2100] Length = 480 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 119/473 (25%), Positives = 218/473 (46%), Gaps = 36/473 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M+ L + S F L+ C++ KP++ + ++ +N I+I+ +WW++F+D Sbjct: 1 MHKLIVLVSCF--LITACSL-----KPNLEIKDVNYTKSLDQN-ISINK-QWWKTFDDNY 51 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI------PNLKT 114 LN LV+ AL+ N + A + A E + R+DL P S S P+ K+ Sbjct: 52 LNILVEQALKNNNDLQIAYINLQKAYEALGIARSDLLPKLDGSASGARAKTSINAPSNKS 111 Query: 115 NS-------TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N L+ +++DL+G+ R +S A L ++ + A+L++IS ++ +Y + Sbjct: 112 NDFVYGNDFNMGLNLSYEVDLWGKYRDGYGASKAKLQASEFDYESARLSLISNVVKTYFN 171 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 E++ I + Y+K EL F G S+ L K +AE+++ + + Sbjct: 172 LASLSEQVKILEETTQSYQKTYELKLEHFKLGVISEYELNKFKAELENSRVLLTNAKIQK 231 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 N + L + L+ + Q L IP GI ++++ RPD++ K L Sbjct: 232 EANTKALKILTSNDIDDILYNSIEYKKIGQYELSIP--EGIGSEILLQRPDVQASLKILE 289 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + +G+A++ P+LSL G + ++ G NT W+ +PIF G+I + Sbjct: 290 EKNYLVGVARTAFLPNLSLTGLLGFQSNDLDLLVKHGSNT-WNVAGNFAMPIFHWGEIMN 348 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSL 399 N+ A+ + E ++ ++ T+ A E+ AL S E+++ L A K + Sbjct: 349 NVNIAKLTKDEAFLQYENTLKTAFGEIRLALFNRQSYYENEQNYKNLFLA---QSKIYEI 405 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S + Y G +L D L +R ++ + + +LA S VD+ A G G+N Sbjct: 406 STLRYENGMINLADFLQDQRNYLNAKLSYTNSSYELANSIVDVMKAFGGGFNA 458 >gi|307565896|ref|ZP_07628355.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella amnii CRIS 21A-A] gi|307345324|gb|EFN90702.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella amnii CRIS 21A-A] Length = 459 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 106/417 (25%), Positives = 190/417 (45%), Gaps = 24/417 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSY 101 + L W F DT L K+++ +L N ++ A I+ A++ + + + P S Sbjct: 52 DFGNLPWRSVFTDTLLQKIIERSLDNNPNLINAMLNIDIAEQQLRAAKLAFLPNVILSPT 111 Query: 102 ASIS-HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 +IS P T + + W + LFGQ R +S+ L A A+ ++I Sbjct: 112 GTISLFGSQPEPTKAYTFPIAASWNVSLFGQLRAQKKSAQVMLMQAKDYKVAAQTSLICN 171 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + I + L K E+ L+ G S+ EA +I + Sbjct: 172 VANLYYTLLMLDSQKEIVENMAKLAKDTWEMMKLQIKFGRARSTSVQSAEAAYYNILTQG 231 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 T+ + R +++S LLG PA + + N + L + + GI + + NR D+ Sbjct: 232 VTIRNNIRKAENSLSLLLGEPAHKI-----NRGNFYYQTLPVTFSGGIGIEQLSNRADVH 286 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDK 337 E LA + A+S YP+L+++ + A ++ N PG S L PIF + Sbjct: 287 ANEMALAQCFYNVQEARSRFYPALNISPTAAWSNGNGLISPG-KLLLSIAGSLTQPIFAQ 345 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHK 394 GK+K+ +R + ++ Y WQ ++L A EV NAL +S NE K++ Q +++ K Sbjct: 346 GKLKAGLRVTQDQYKQAYNKWQNSILTAGAEVSNALVGYSSANEKTKLI---QRQIDVLK 402 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 K++ + + Y+Q S ++++ ++ +++ + Q AK S V+LY A+G G Sbjct: 403 KNVEQTQLLYKQSSSSYIEVITAQQGLLNAQIEQ--VQEQFAKLQSIVNLYYALGGG 457 >gi|332851265|ref|ZP_08433338.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6013150] gi|332866134|ref|ZP_08436849.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6013113] gi|332730145|gb|EGJ61472.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6013150] gi|332734775|gb|EGJ65869.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6013113] Length = 464 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 118/452 (26%), Positives = 201/452 (44%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLK--WWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ WW F D LN+L Sbjct: 9 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDHWWTLFGDAQLNQL 67 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L SS S H F N +S L Sbjct: 68 VTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSM 127 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 128 SAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATA 187 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL Sbjct: 188 QQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 247 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 248 HEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATK 303 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP +K +I + ++ Sbjct: 304 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAI 363 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 364 IQYRQTLYQAFADVENALSSRTELDKQVAIQERNVELAEKTERLTEVRYRYGAVALKTLL 423 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 424 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 455 >gi|194334206|ref|YP_002016066.1| RND efflux system, outer membrane lipoprotein, NodT family [Prosthecochloris aestuarii DSM 271] gi|194312024|gb|ACF46419.1| RND efflux system, outer membrane lipoprotein, NodT family [Prosthecochloris aestuarii DSM 271] Length = 475 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 109/468 (23%), Positives = 218/468 (46%), Gaps = 38/468 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK------NLINIDTLKWWESFNDTSLNKL 64 I L+ C++ +Y +P + P+ F S + I L + F D +L L Sbjct: 19 LIASLSSCSMSGKYIQPETGV-PSSFRGEQSAQQHPLHSSSTIGRLSYRTFFQDPALLVL 77 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIP------ 110 ++ A+ N + A + I+ A + P SS + + P Sbjct: 78 IESAIAHNSDLQLAMKNIDYASLTLRQAGLSGLPGFGLQGSASSSGTSDYGSSPLSDGEE 137 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +++T S S W++D++G+ R +S+LA + + +++ + Y + Sbjct: 138 SVETFSASAYAS-WELDIWGKIRSRKKSALAGYLESVEAGKAVQTRLVASVAEGYSTLQM 196 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ Q L+L + + L++ G + L++ + EA E+ + +E+ + Sbjct: 197 LDTQYAVTAQNLELAATTLSMMRLQYDAGLVTSLAVDRQEALKLDAEAGLAKIEQQIALQ 256 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + +S L G P ++ N F + GIPA L+ NRPD++ E L + Sbjct: 257 ENALSVLCGRMPEGIERGAVRPMQNRF--------SAGIPAALLSNRPDVKAAELALMKA 308 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A+ G+A ++LYPSL+++ GS AL + +FPG + G L PIF +G +++ Sbjct: 309 HAETGVAAANLYPSLTISAEAGSEALKASDWFTFPGSLFSFVQGAVLQ-PIFQQGTLRTA 367 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++++ +E+ I +++ VL+A++EV +AL +I++ + V L ++S++ + + Sbjct: 368 YKQSQVVREEEEIRFRQAVLDAVREVSDALVTIDKLDVQQRAAEKQVALLQQSVTNAGLL 427 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G LD++ + A E+ LS +RQ + +LY A G G+ Sbjct: 428 FQGGMADYLDVISAQSAALDAELSLSDIRRQQRNAVTELYRAAGGGWQ 475 >gi|226943554|ref|YP_002798627.1| RND efflux system, outer membrane lipoprotein, NodT family [Azotobacter vinelandii DJ] gi|226718481|gb|ACO77652.1| RND efflux system, outer membrane lipoprotein, NodT family [Azotobacter vinelandii DJ] Length = 507 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 115/483 (23%), Positives = 204/483 (42%), Gaps = 55/483 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQN 72 +GC +GP+Y +P + + K D WW + D L+ L+ N Sbjct: 23 SGCMLGPDYQRPAVSMPVDYKEAAGWKAATPRDGEARGDWWRVYGDARLDALLVQVEVSN 82 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS--------------------------- 105 + Q + A RADLFPS S Sbjct: 83 QNVAQYLAQYAQALALTGQSRADLFPSLRGSAGMTRSGSGGGTYLTSSTGSSTSSATGSS 142 Query: 106 ---------HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 R + + N + QL W++DL+G+ RR +E A+ +++ A++ A L+ Sbjct: 143 GSEGVTQSSSRSVSGISDNYSAQLSLSWELDLWGKLRRTLEEDRASAEASAAELADATLS 202 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 S L +Y R ERI + + Y++ + + ++ +G TS+ +L + E +++S Sbjct: 203 AQSSLAQNYFQLRVLDERIRLYDINIRSYERYLRVVRDQYEEGQTSRATLAQAETQLESA 262 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + L H I+ L+G EF + ++ P + G+ + L+ R Sbjct: 263 RASSLDLRWQRAQYEHAIAILIGKAPAEFSLPVAERFEQRIPE----TSAGVASSLLERR 318 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYL 332 PDI E+ +A + A IG+AKS +P L+L+ S + F N WS GP Sbjct: 319 PDIAAAERDVAAANAAIGVAKSGYFPDLTLSASGGFQDSGTKKLFTVANRFWSIGPSFSQ 378 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD G ++ + +A +S T+++TVL+A+ EVE+ L + + + T+L Sbjct: 379 TLFDFGSTRAEVAQARASYDAAVATYRQTVLDALGEVEDYLVEL---RTLETELAARRRA 435 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE----RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + Y Q ++D LD+ + ++ + L + QL S V L +A+G Sbjct: 436 ADAARESERVTYDQYEEGMIDYLDVATTQNTSLSEQQSVLQLVGTQLVAS-VQLIVALGG 494 Query: 449 GYN 451 G+ Sbjct: 495 GWQ 497 >gi|213155976|ref|YP_002318021.1| RND efflux system, outer membrane lipoprotein, NodT family [Acinetobacter baumannii AB0057] gi|215484671|ref|YP_002326906.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] gi|301346495|ref|ZP_07227236.1| putative outer membrane protein precursor [Acinetobacter baumannii AB056] gi|301509985|ref|ZP_07235222.1| putative outer membrane protein precursor [Acinetobacter baumannii AB058] gi|301594200|ref|ZP_07239208.1| putative outer membrane protein precursor [Acinetobacter baumannii AB059] gi|213055136|gb|ACJ40038.1| RND efflux system, outer membrane lipoprotein, NodT family [Acinetobacter baumannii AB0057] gi|213988085|gb|ACJ58384.1| Outer membrane protein oprM precursor [Acinetobacter baumannii AB307-0294] Length = 468 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 117/447 (26%), Positives = 200/447 (44%), Gaps = 19/447 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTLK--WWESFNDTSLNKLVKIAL 69 L GC V Y P + + P F +K +++ WW F D LN+LV L Sbjct: 18 LVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDHWWTLFGDAQLNQLVTNVL 76 Query: 70 QQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD---- 123 ++N L + T + + ++ + + L SS S H F N +S L Sbjct: 77 ERNSDLAVAGITLKQARLQADLTANKQGLRTSSSVSTGHSFDLNSGDDSAKGLSMSAGVS 136 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R E+S + + ++I+ Y + ER + A Q L Sbjct: 137 YELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATAQQSLA 196 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL P Sbjct: 197 TSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLLHEP-- 254 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + Q P +P I G+PAD++ RPD++ E +L ++A K+ YP Sbjct: 255 --VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATKASYYP 312 Query: 302 SLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S+SL S+ + + N + G L LP +K +I + ++ I +++ Sbjct: 313 SISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAIIQYRQ 372 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +LD ++ Sbjct: 373 TLYQAFADVENALSSRTELDKQVAIQERNVELAEKTERLTEVRYRYGAVALKTLLDAQQT 432 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 T + L K+ +YV L A+G Sbjct: 433 TRTARLSLVETKQSQYNAYVTLMQALG 459 >gi|184156864|ref|YP_001845203.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|183208458|gb|ACC55856.1| Outer membrane protein [Acinetobacter baumannii ACICU] Length = 468 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 117/452 (25%), Positives = 202/452 (44%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ +WW F D LN+L Sbjct: 13 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDRWWTLFGDAQLNQL 71 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L +S S H F N +S L Sbjct: 72 VTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTNSSVSTGHSFDLNSGDDSAKGLSM 131 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 132 SAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATA 191 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL Sbjct: 192 QQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 251 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 252 HEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATK 307 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP +K +I + ++ Sbjct: 308 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAI 367 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 368 IQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLL 427 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 428 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 459 >gi|332874060|ref|ZP_08441995.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6014059] gi|332737801|gb|EGJ68693.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Acinetobacter baumannii 6014059] Length = 464 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 117/452 (25%), Positives = 202/452 (44%), Gaps = 19/452 (4%) Query: 10 LFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSK-NLINIDTL--KWWESFNDTSLNKL 64 L L GC V Y P + + P F +K +++ +WW F D LN+L Sbjct: 9 LLTSSLVGCAAVVKTPYQAPAVQV-PGSFQYDKAKAKTASVEQYSDRWWTLFGDAQLNQL 67 Query: 65 VKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS 122 V L++N L + T + + ++ + + L +S S H F N +S L Sbjct: 68 VTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTNSSVSTGHSFDLNSGDDSAKGLSM 127 Query: 123 D----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DLFG+ R E+S + + ++I+ Y + ER + A Sbjct: 128 SAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQLGYLNERYATA 187 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L +K +L ++ GA S L L + E ++S ++ + +E+ I+ LL Sbjct: 188 QQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQLVETRTAIAVLL 247 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + + Q P +P I G+PAD++ RPD++ E +L ++A K Sbjct: 248 HEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKALATKDATK 303 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YPS+SL S+ + + N + G L LP +K +I + ++ Sbjct: 304 ASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISNLDYEKAI 363 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 I +++T+ A +VENAL+S E K V + VEL +K+ L+ + YR G +L +L Sbjct: 364 IQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGAVALKTLL 423 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D ++ T + L K+ +YV L A+G Sbjct: 424 DAQQTTRTARLSLVETKQSQYNAYVTLMQALG 455 >gi|121609213|ref|YP_997020.1| RND efflux system outer membrane lipoprotein [Verminephrobacter eiseniae EF01-2] gi|121553853|gb|ABM58002.1| RND efflux system, outer membrane lipoprotein, NodT family [Verminephrobacter eiseniae EF01-2] Length = 487 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 105/459 (22%), Positives = 206/459 (44%), Gaps = 16/459 (3%) Query: 4 LRAIFSLFIVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 LR ++ AGC+V Y +P P+ + L W + F D L Sbjct: 22 LRLCAVALLMTQAGCSVMTTAYERPAAPVPASYALAAADAPQGAASLLPWQDYFADPRLR 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNST--- 117 +L+ IAL N + A + + RADL+P A S + K N + Sbjct: 82 QLLDIALTNNRDLRVAMLNVEQTRAQFQLRRADLYPGVDLNAKASRARATDGKPNPSFGL 141 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + W+ID FG+ R + +LA ++ + A+L++++ + +++ +E + + Sbjct: 142 GLAVTAWEIDFFGRIARLKDQALAQYLASQEGRNAAQLSLVASVANGWLNLLADEELLGL 201 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + Q L + + L+ ++ G S+L + E+ + + + ++ ++ + ++ L Sbjct: 202 SRQTLASRESSARLTRMRLDAGVVSELDWRQAESLTQDARATLAQQQRQRAVDENALALL 261 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 LG + + +S +P+ G+P++L+ RPDIR E++L + A + A+ Sbjct: 262 LGQALPDDIRASLARSRLADAPALVPLPAGLPSELLTRRPDIRQAEQQLIAAKASMDAAR 321 Query: 297 SDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P ++L D F G + +S P L L +FD G+ ++ + +E+ Sbjct: 322 AAFFPHITLTAQAGTASDALSGLFHGGSWGFSIAPSLLLALFDAGRNQAQLEVSEAVRSI 381 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ + A +EV +AL + V Q+ + S+ L+ + Y G S LD Sbjct: 382 AVAQYEKAIQTAFREVSDALAGQATLGEQVQARQNQAQAEAASLRLAELRYLNGVASHLD 441 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R +T + V +A+ Q + V LY A+G G Sbjct: 442 LLDAQRSLFSTQQAVVQTRLAQLQ---NQVTLYKALGGG 477 >gi|302345233|ref|YP_003813586.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella melaninogenica ATCC 25845] gi|302148999|gb|ADK95261.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella melaninogenica ATCC 25845] Length = 459 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 109/414 (26%), Positives = 181/414 (43%), Gaps = 26/414 (6%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASIS 105 L W F D L L++ AL N +L A + A++ + + + PS +IS Sbjct: 56 LPWRSVFTDPHLQTLIEKALNNNPDLLNAALNVEIAEQQVKAAKLSFLPSVVFAPTGTIS 115 Query: 106 HRFIPNLKTNSTG-QLDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVISKLIP 162 H T S + + W+IDLFG+ R + + A + AQ A+ +IS + Sbjct: 116 HFGTHTSSTQSYSLPVSASWEIDLFGKLRSSKKA-AQMTMIQAQDYKVYAQTTLISSVAN 174 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + I +L L K ++ L+ G S+ EA S+++ + Sbjct: 175 LYYTLLMLDRQKQIVDDMLGLTKNTWDVMKLQMEFGRARSTSVQSAEAAFYSVQTQAADI 234 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYM---QKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + R + +S LLG PA Q S NF GI L+ NR D+ Sbjct: 235 RRQIREAENTLSLLLGEPAQTIARGSLDNQSLSANFAG--------GIGVQLLSNRADVH 286 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDK 337 E LA + A+S YPSL+++ + A T+ PG S L PIF + Sbjct: 287 ANEMALAQCFYNVQTARSRFYPSLTISPTGAWTNGGGMVNPG-KLLLSVVGSLTQPIFMR 345 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++ + +R AE ++ Y TWQ ++L A EV NAL + N + + +++ K ++ Sbjct: 346 GQLTAGLRVAEDKYKQAYNTWQNSILKAGSEVSNALVAYNAANEKEQLRKQQIDVLKTNV 405 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 + + Y Q + L+++ +++ E+ S + Q K S V+LY A+G G Sbjct: 406 EHTQMLYTQSSSTYLEVITAQQSLLNAEI--SQVQEQFTKLQSIVNLYKALGGG 457 >gi|221065776|ref|ZP_03541881.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220710799|gb|EED66167.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 525 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 88/399 (22%), Positives = 196/399 (49%), Gaps = 45/399 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 +WW + D++L++L + A N ++ QA R+ +A+ + S RA P+ S R + Sbjct: 99 QWWTVYGDSTLDQLQQAAAAGNPSVEQAVARLRSAQAAVASSRAAQLPTLSTTGSGSRAL 158 Query: 110 PNLKT--NSTGQ---------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 T N+ G+ L + W++DL+G+ +++S A+ ++ + Sbjct: 159 TGGGTYSNTNGENVARSGSINNNFSLGLSASWELDLWGKLSGAVDASRASAQASADDLAA 218 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L+ + + +Y R + ++ + L+ Y ++++L+ ++ G S + + +++ Sbjct: 219 ARLSAQASVAQTYFSLRAAEAQMKYLQESLEAYGQSLKLTQNRYQAGVVSSADVAQAQSQ 278 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP--- 268 KS ++ + + + H ++ LLG F + ++P +P Sbjct: 279 YKSTQASLLDAQITRAQYEHALAALLGKAPANF---------SLPVTGHLPTPPAVPEML 329 Query: 269 -ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNT 322 + L+ RPDI E+++A + A+IG+A++ +PSL+L+ S + NS N Sbjct: 330 ASTLLERRPDIAAAERRVALANAQIGVARAAYFPSLTLSASAG--YRNSVLSDLLNAPNL 387 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINED 379 WS GP L + +FD G + + A ++ +++TVL A++EVE+ A ++ ++ Sbjct: 388 FWSLGPALAMSLFDGGARSAAVESARATLDLNAAAYKQTVLTALQEVEDNLVAAVNLAQE 447 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +++ T+ A+ +KS++++ Y+ G + L+++ + Sbjct: 448 EQVQTE---ALAAAQKSLTVANNQYQAGIVAYLNVISAQ 483 >gi|114327976|ref|YP_745133.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] gi|114316150|gb|ABI62210.1| type I secretion outer membrane protein [Granulibacter bethesdensis CGDNIH1] Length = 527 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 110/477 (23%), Positives = 206/477 (43%), Gaps = 37/477 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ +L C++GP + P + + P F + + +WW FN L +L+ Sbjct: 48 ALGPFLAAILGACSLGPSWKSPDLDI-PAAFRATPASAQAAWPSAEWWRDFNQPELTELM 106 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------------- 108 + A +N I A R+ A A L P+S S H + Sbjct: 107 EEAKARNFDIAAAIARVRQADAQARVSGAPLLPASSLSGGHSWNQTARTKNGASGVSVGA 166 Query: 109 -----IPNLKTNSTGQLD-SD---WKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVI 157 P TN Q + SD +++D +G+ R + A + Y++ D L Sbjct: 167 GNTILTPGNHTNEVRQYNISDTISYELDFWGKNRATFEA-AKESAQYSRFDQATVALTTT 225 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + +Y + F+ R++IA L ++ +++ +F G S L + + EA ++ + + Sbjct: 226 AAVATTYFNILGFQARVAIAEDNLRQSEETLKVIRARFEAGTASLLDVSQQEALMEGLRA 285 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++P L V ++ L+G P E + K + Q + P G+P DL+ RPD Sbjct: 286 NVPALRSQLEQQVISLGLLVGRP-PEMVSV--KGGSLEQATIPQPAP-GLPVDLVARRPD 341 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 I E +LA + A I +A++ +PS +L G ALT F S + + Sbjct: 342 IAAAEAQLASANANIKVARAKFFPSFTLTASGGFQALTMAYLFTPQGQIASLSSSVAQTV 401 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G + N+ A+ +E T+++ V+ A +VENA+TS + + AVE+ + Sbjct: 402 FDNGVLFGNLDIAKGRYEELLATYRKAVVQAFTDVENAITSYRYATEQEAMQRKAVEVSR 461 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ ++ G + +L ++ + L+ + ++ ++LY A+G G+ Sbjct: 462 RAADVARAQLLAGVIDVTALLQAQQTLFSNQATLAQVRLSRFEAVINLYKALGGGWT 518 >gi|261856035|ref|YP_003263318.1| RND efflux system, outer membrane lipoprotein, NodT family [Halothiobacillus neapolitanus c2] gi|261836504|gb|ACX96271.1| RND efflux system, outer membrane lipoprotein, NodT family [Halothiobacillus neapolitanus c2] Length = 514 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 109/476 (22%), Positives = 218/476 (45%), Gaps = 45/476 (9%) Query: 10 LFIVLLAGCT-VGPEYTKPHMPLLP--------------TQFSIGNSKNLINIDTLK--W 52 L + +LAGC+ VGP++ P P +P T G +++L ++ W Sbjct: 22 LSLTMLAGCSAVGPDFVAPAAPDIPGYTAQAMPKSTKATTGIEQGEAQSLKQASFIQGDW 81 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSYASISHRFIPN 111 W++F+ +LNKL++ + + T+ A ++ A++ + P +S + Sbjct: 82 WKAFHSPALNKLIEQGMAASPTLTAAEAKLEQARQTYAAQYGSTELPQVNGKLSGQ---K 138 Query: 112 LKTNSTG---------------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 KTN++G + + +DLFG RR +E+ A D Q+D A+L Sbjct: 139 QKTNNSGIGQEGNGRVFGLYNAGVTVSYNLDLFGGNRRALEALAAQTDYQKYQLDAARLT 198 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + + ++I+ I+ ++ ++L + GA ++ ++ L+ ++ Sbjct: 199 LAGNIAVQAMMQAMYNDQIATTKNIISNQEEQLKLIRSRLELGAATQSDVLTLQTQLDQT 258 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + +P L + H ++TL+G P ++ + ++F +P+ +P+ + +R Sbjct: 259 RATLPPLILKRDQSDHLLATLVGQPPSKVMPVFSL--SDFTLPAELPVV--VPSQWVASR 314 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDI+ L + A+ G+A S+LYP ++L+ GS LT + F + WS L Sbjct: 315 PDIQASTALLHQASAQYGVAVSNLYPQINLSATVGSQGLTPASLFDANSIIWSLIAGLTQ 374 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ G ++S + A++S +Q+TVLN ++ +AL + D + A Sbjct: 375 PIFNAG-LESGAKAAKASLSAAAANYQQTVLNGLRNTADALRATAIDADTLNAQAAAERS 433 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + S+ L+ + G + L +L ++ A+ ++ A+ Q V LY A+G Sbjct: 434 AQASLDLTQQQMKLGAINSLQLLTAQQQVAQTQLLTLAARSQRLTDSVALYQAMGG 489 >gi|186477826|ref|YP_001859296.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194285|gb|ACC72250.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 536 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 112/472 (23%), Positives = 212/472 (44%), Gaps = 44/472 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDTSLNKLVKIALQQ 71 +GC VGP+Y +P + + + + + D WW +ND LN L + Sbjct: 35 SGCAVGPDYKRPSVDIPASYKEAADGWKVAQPADQHDRGAWWSIYNDAQLNALEEKLNAS 94 Query: 72 NLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTG----------- 118 N +I Q A+ + RA FP S+ A S P+ + + Sbjct: 95 NQSIAQFAAAYRQARALVGEARAAYFPVISASADASRSRTPSRSFSGSVTGGGGGTTSSL 154 Query: 119 ------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 LD+ W+ DL+G+ R + A SA A + A+L+ + L +Y Sbjct: 155 SSSGSISNSYSLSLDATWEPDLWGKVSRTVAGQQAGQQSAAADLANARLSAQATLAQTYF 214 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + + + Y++++ L+ ++ QG ++ +++ + +++S ++ + Sbjct: 215 NTRSLDAQQKLLDDTVAAYQRSLTLTQNRYAQGVAARSDVIQAQTQLQSAQAAAIDNGVA 274 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEK 283 N H I+ L+G PA+ F S P +P + +P+ L+ RPDI E+ Sbjct: 275 RAQNEHAIAVLVGQPASTF-------SLPPAPLDAVPPVVPAQLPSALLERRPDIASAER 327 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGK 339 K A + +IGIA + +P+L+L+ S + F + W+ GP+L IFD G Sbjct: 328 KAAAANEQIGIAIAAFFPTLTLSASGGF-ESSVFSQLLQMPSRFWTLGPQLAGTIFDAGL 386 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 K+ A ++ + T+++TVL A ++VE+ L+S+ ++ +T Q AV+ ++++ + Sbjct: 387 RKAQTDAARATYDQDVATYRQTVLTAFQDVEDNLSSLRILEQEITVQQQAVQSAQQALDI 446 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G L++L + + L+ Q S V L A+G G++ Sbjct: 447 VTNQYKSGTVDYLNVLTAQTTAFTAQQKLASIAGQRMVSSVGLVKALGGGWD 498 >gi|296115849|ref|ZP_06834474.1| multidrug efflux system outer membrane protein [Gluconacetobacter hansenii ATCC 23769] gi|295977615|gb|EFG84368.1| multidrug efflux system outer membrane protein [Gluconacetobacter hansenii ATCC 23769] Length = 438 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 98/423 (23%), Positives = 195/423 (46%), Gaps = 26/423 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 W E + D + L+ ALQ N + A ++ AA A LFP Sbjct: 4 WREFYRDPVMQNLIATALQNNRDLHIAQQQTRAASSQFDIENAALFPTLNGTAGANIQKM 63 Query: 99 -SSYASISHRFIP-NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD----SAYAQVDIA 152 S S+S P ++ + G S +++DL+G+ R +S A D SA Q + Sbjct: 64 NSHIWSLSRTNEPIYMRQYAVGFGVSAYEVDLWGRIR--SASRAAFDRYMASALTQQAM- 120 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L++IS + + ++ + +++ +L+ + +L T G ++L + + EA + Sbjct: 121 RLSIISSVATAMLNWIANNQAVTVTQNVLENRRHTYDLVKQTATVGTGTQLDVAEAEAAL 180 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADL 271 E+D+ + + ++ L+G P ++ + M +++ + + I G+P+D+ Sbjct: 181 HDAETDLQIYTRQRAETLDQLTLLVGTPLSDATIQSMNAKTSLDRVTAFPNIPAGLPSDM 240 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGP 328 I RPDI E +L + IG A+++ +P + + NG+ + F W+ P Sbjct: 241 IARRPDIAASEGELRAANDDIGAARAEFFPKIQITAANGTASNNITRLFQSGMGAWNVAP 300 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 ++ LP+FD G++ + +++A + +E+ ++ T+ A +EV +AL +T Q Sbjct: 301 QITLPLFDAGRLTAQLKQAHARKREEMARYERTIQAAFREVADALVGRETYVGQMTAQQA 360 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +V ++ +L++ +R G L L +RA E+ + Q + V LY A+G Sbjct: 361 SVSATQRQYTLALQRFRAGYDPYLATLVAQRAWYTAELAAITTQLQALSNSVTLYKALGG 420 Query: 449 GYN 451 G+ Sbjct: 421 GWG 423 >gi|224371074|ref|YP_002605238.1| MdtP2 [Desulfobacterium autotrophicum HRM2] gi|223693791|gb|ACN17074.1| MdtP2 [Desulfobacterium autotrophicum HRM2] Length = 486 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 213/470 (45%), Gaps = 39/470 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIG---NSKNLI----NIDTLKWWESFNDTSLNK 63 I+LL GC++ P YT+P P+ P Q+ G S ++ ++ +L W F D L + Sbjct: 21 LIILLGGCSLAPRYTRPPAPV-PGQWPQGAAYKSGDVPALPQDVQSLAWQAFFTDPRLQQ 79 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTNS 116 +++ AL+ N + A + + RA+ +P +S S I + Sbjct: 80 VIETALENNRDLRLAALNLERVRGVYGIQRAEFYPVVDFSGSASKLGRSRDLITTSYPRT 139 Query: 117 TGQLDSD-----WKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 Q D W+ID FG+ + + E LA D A + IA + +++ +Y Sbjct: 140 IEQYTVDFGIAAWEIDFFGRLKSLKDQALEEYLAT-DQARSSAQIALMAEVAR---TYFT 195 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E +++A L+ + + +L + G +++ L + + ++ + + D+P + Sbjct: 196 LAADQENLALARATLENQQASFDLIQKSYNAGLVTEIDLHQAQTQVDAAKRDVPRFTQLV 255 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + ++ L G E L + + P++ G+ + ++ NRPDI E +L Sbjct: 256 AQDKNALTLLAGGEVPEAL--LPAGLDGIAA--LEPLSPGLSSAVLLNRPDIVAAEHRLK 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ L+P +SL G++ D+ F ++ W+F P++ +PIFD + + Sbjct: 312 GANAFIGAARATLFPRISLTGALGTASDDLAGLFKSDSSTWNFTPQISVPIFD-ARAWAA 370 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +++ + ++ + A +EV +AL + + V + LS Sbjct: 371 LGVSKTDRRIILTQYERAIQTAFREVADALAVQGTIDDQLAAQKSLVNSVAATYDLSGKR 430 Query: 404 YRQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G S L +LD R+ + +V +S+ +LA S V LY +G G NP Sbjct: 431 YNMGLDSYLGVLDAHRSLYTQQQVLISLRLTRLA-SQVTLYAVLGGGGNP 479 >gi|326316216|ref|YP_004233888.1| putative phytochrome sensor protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373052|gb|ADX45321.1| putative phytochrome sensor protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 490 Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 95/382 (24%), Positives = 176/382 (46%), Gaps = 20/382 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW F D L+ LV+ A N ++ +A R+ A+ + S A P + A ++ + Sbjct: 66 WWLGFRDPVLDDLVQRAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGVARQAG 125 Query: 110 PNLKTN-------STGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKL 160 N T +T L+ +++DLFG R S A LD S A + A+L + Sbjct: 126 ANTATGGPAPATLATAGLNVSYELDLFG-RLSQASDAARLDARSREALLQSARLMAQADT 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R + ++ + L Y+ + L+ ++ G ++L + +++AE+ + ESD Sbjct: 185 AQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYQAGDVAELDVARVQAEVAATESDAL 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE+ + H ++ L+G AT F + L + I G+P ++ RPD+ Sbjct: 245 ALERQQAVLTHALALLVGEVATGFT----VPPAAGEATLPV-IPPGVPGTVLARRPDVSA 299 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + + + A++G+A++ +P+++L G+ + F W G L LP+FD Sbjct: 300 AQAAVLAAQARVGVAQAAWFPAVTLTGNGGYASPELGDLFKWSARSWGIGALLSLPLFDG 359 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++ A + + + VL A +EVE+ L+++ AV+ ++ Sbjct: 360 GQRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRLLAGQAEAQGRAVQSAARAT 419 Query: 398 SLSMINYRQGRYSLLDILDIER 419 LS YR G S L++LD R Sbjct: 420 QLSDSRYRNGMVSQLELLDARR 441 >gi|121604207|ref|YP_981536.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120593176|gb|ABM36615.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 468 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 105/415 (25%), Positives = 191/415 (46%), Gaps = 27/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTI----------LQATERINAAKENILSVRADLFPSSY 101 WW F D LN+LV+ A + N ++ + +A + + + A + Sbjct: 64 WWSVFADPVLNQLVEQASRSNNSVQVAAARLLQARAIARQTDAGRAPQVGLGAGATRQTN 123 Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY--AQVDIAKLNVISK 159 AS H +P ++ L +++DLFG+ S+ A+LD+A A + +L V + Sbjct: 124 ASTGH--VPATVVSAGASLS--YEVDLFGKLAGA-SNAASLDAASREALLRSTRLLVQAD 178 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ R + + L Y+ + L+ ++F +G ++L + ++ +E+ S ESD Sbjct: 179 VAQTYLSLRALDAERGLVNSTLQAYRNTLRLTEVRFREGDVAELDVARVRSEVASTESDA 238 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDI 278 LE+ H ++ L+G A+ F Q + +P I G+P+ ++ RPDI Sbjct: 239 LALERRRAELEHAVAVLIGEVASTF------QIAPVEWATALPVIPAGVPSSVLVRRPDI 292 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 + L + A++G+AK+ +PS+SL G A + F W G L LPIF Sbjct: 293 AAAQTTLQAAQARVGVAKTAWFPSISLTATGGYAAPEVGDLFKLSARAWGIGALLSLPIF 352 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ ++ A + ++E VL A ++VE+ L+++ +V + Sbjct: 353 DGGQREAGVQSANAELDIALANYREQVLVAFRDVEDQLSALRLLADQSEAQSRSVASSSR 412 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LS YR G S L++LD +R+ + K S V L A+G G+ Sbjct: 413 ATLLSDTRYRNGFVSQLELLDAQRSELRNRRQALQVKAAQYLSTVGLIRALGGGW 467 >gi|91784453|ref|YP_559659.1| aromatic acid efflux system, outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91688407|gb|ABE31607.1| aromatic acid efflux system, outer membrane lipoprotein [Burkholderia xenovorans LB400] Length = 514 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 103/474 (21%), Positives = 203/474 (42%), Gaps = 27/474 (5%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----TLKWWESFN 57 I A ++ +AGC + P GN+ N D ++ WW ++N Sbjct: 8 GIAAAAVLTILLTIAGCASTGGVAPQASGVQPASLDAGNAIRAANADAQWPSVDWWRAYN 67 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL-- 112 D LN+ + A N ++ A R+ A R+ L P ++S ++ N+ Sbjct: 68 DPQLNEWIDAAQAGNPSLAAAQARVREAMSMAGVARSALSPQVNGNLSVQRQKWSDNVYY 127 Query: 113 ---------KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 N+TG L + +D++G+ R+ E +L ++ A A+L + ++ Sbjct: 128 GPGPLAGEQSWNNTGTLGLSYHLDIWGKDRNAAERALDAAHASAADARAAQLELEGNVVR 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI+ + IA L ++ ++L+ + G ++L + + E + E I + Sbjct: 188 TYIEMSMNYALLDIAKSTLQQQQQIVDLASRRLKGGIGTQLEVSQAETPLPEYERQIDEI 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E+ + + ++ L G +Q+ + + +P +PADLI +RPD+ Sbjct: 248 EEKIALGRNQLAALAGK-GPGAGDSIQRPTLSLNTPAGLPS--ALPADLIGHRPDVVAAR 304 Query: 283 KKLADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDK 337 +A I +AK+D YP + S+ G A+ F +H WS GP L LPI D Sbjct: 305 WSVAAQARGIDVAKADFYPDINLLASIGGYAAMGPLFQFLKNPSHSWSGGPALSLPILDG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++S + A + E + ++++ A+K++ + + I +V +K+ Sbjct: 365 GRLRSQLGAASAGYDEAVDRYNQSIVGALKDISDQVIRIRSLATQAEDADRSVATARKNY 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS YR+G L++L + + ++ + + ++ L A+G G + Sbjct: 425 DLSREGYRRGLTDYLNVLIAQNQLLHAQEGVAKIQAERLGAHASLVTALGGGLD 478 >gi|134095560|ref|YP_001100635.1| outer membrane transport protein involved toxic tolerance [Herminiimonas arsenicoxydans] gi|133739463|emb|CAL62514.1| Outer membrane protein oprM [Herminiimonas arsenicoxydans] Length = 476 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 212/476 (44%), Gaps = 38/476 (7%) Query: 4 LRAIFSLFIVL-LAGCTV-GPEYTKPHM------PLLPTQFSIGNSKNLINIDT------ 49 L + +L I L ++GC + P+ K PL P + G + + DT Sbjct: 5 LLSTLALAITLAVSGCAMLEPQLPKADAAIPAAWPLPPNTAAAGQN---VTADTSATKEQ 61 Query: 50 ----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI- 104 + W + F D L +L+ AL N + A + A+ A+ FP+ S+ Sbjct: 62 AAADIGWRDFFVDPKLEELIARALHNNRDLRVAVLNVERARAQYQIQNAERFPALDGSVA 121 Query: 105 ---SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVIS 158 S + N + L + +++DLFG+ ++ S A L+ +AQ + A+L++I+ Sbjct: 122 RNRSGGNVVNPGDYYSAALSASFELDLFGRIHNL--SQAALEQYFAQEEGQRSAQLSLIA 179 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ E IA D + +L + GA S L L + + I++ +D Sbjct: 180 EIANTYLTFAADLESQRIAQATFDNQQIAYDLVVKRHRAGAVSGLDLSQAQTTIETARAD 239 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + L Q + + + P+ +P+ ++ RPD+ Sbjct: 240 VARYAGLVATDRNALTLLVGAPVEDSLL---PQGFDLKVSGIAPLPAQLPSQVLLRRPDV 296 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPI 334 R E L + A IG A++ +PS+SL GS+ + N G WSF P++ LPI Sbjct: 297 RQTEHVLRGANANIGAARAAFFPSISLTGSVG-SASNQLSGLFDSGTKFWSFVPQISLPI 355 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G +++N+ A + +++ + + +EV +AL + + Q ++ Sbjct: 356 FHGGALRANLGVATADRDIALARYEKAIQSGFREVADALALTSTLAQRRQAQQALLDAAS 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ LS Y+ GR S L +LD +R + L A+ + V LY +G G+ Sbjct: 416 RAYDLSKARYQYGRDSFLILLDAQRTFYTAQQSLVAAQLAEQGNRVTLYKVLGGGW 471 >gi|254295098|ref|YP_003061121.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] gi|254043629|gb|ACT60424.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] Length = 468 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 107/455 (23%), Positives = 214/455 (47%), Gaps = 29/455 (6%) Query: 14 LLAGC-TVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 LL GC ++ P Y P P +PT I ++ + L+W + F L +L+ IAL + Sbjct: 16 LLGGCASLAPTY-DPSTPPIPTALHEIEQKEDTAQL--LEWEKVFTAPQLKELIDIALVE 72 Query: 72 N--LTILQATERINAAKENILS-------------VRADLFPSSYASISHRFIPNLKTNS 116 N L ++ A R + A+ I S D F + ++I+ + + + Sbjct: 73 NRDLRVVAANVRASRAQYGISSSARWPSLTAASSVTEGDTFENDASTIAQSSFSDSNSLT 132 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G S +++D F + ++ E++L S+ AK+ +++ + S+I + ++ Sbjct: 133 VGV--SSYELDFFNRVGNLSEAALQTWLSSAEGERSAKILLVASVAESWISLASNQRLLN 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + + +++EL+ +F G ++L + + + + + ++ L+ R NV+ + Sbjct: 191 LAQETANSQLESLELTQRRFNSGVANELDVQRAASSVYTARAEAARLKAVVRQNVNALRL 250 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G P E ++K + P ++ + ++ RPDI E L + A IG A Sbjct: 251 LVGAPLPE--DVVEKADLSAAPTTE-NLSFAQSSSVLLGRPDIMAAEHSLLAANANIGAA 307 Query: 296 KSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PS+SL GS+ L+ D S + WS GP + LPIFD G+ S ++ +++ + Sbjct: 308 RAAFFPSISLTGSVGYLSGDLSDLVKATSGGWSIGPSISLPIFDGGRRSSALKVSKAQQE 367 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ + +A KE +AL + + + L+ VE + ++ LS + G S L Sbjct: 368 AALAGYESAIQSAFKETADALALADTIDERLDALEKLVEANHLTLELSNARFSTGIDSYL 427 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +LD +R + L ++ A + V ++ A+G Sbjct: 428 SVLDAQRNDYAAQQSLISSQTDKALNAVSVFRALG 462 >gi|288799655|ref|ZP_06405114.1| multidrug resistance protein, FusA/NodT family [Prevotella sp. oral taxon 299 str. F0039] gi|288332903|gb|EFC71382.1| multidrug resistance protein, FusA/NodT family [Prevotella sp. oral taxon 299 str. F0039] Length = 472 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 110/429 (25%), Positives = 187/429 (43%), Gaps = 47/429 (10%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N + W F D L L+++ LQ N+ +L A + A + +++ + PS + Sbjct: 64 NFGNMPWRSVFTDPQLQTLIEMGLQHNIDLLNAALNVKAVEAQLMAAKLSFLPS-FTFTP 122 Query: 106 HRFIPNLKTNSTGQ-----LDSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNV 156 I + N Q + + W IDLFG Q+R + +L L + QV + K NV Sbjct: 123 QGTIASWDGNKATQTYQLPISASWDIDLFGKLLSQKRSAQVAL--LATKDYQV-VVKTNV 179 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 IS + Y +++ I + + L K+ ++L ++ G + EA S++ Sbjct: 180 ISGIANMYYTLLMLDKQLDIVNNMEKLTKETLDLMVIQKDLGRVRSTGVQSAEANYYSVQ 239 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRN 274 + + + R + +S LLG A +Q+ + Q +P N+ G+ ++ N Sbjct: 240 TKKTDIIRQIRETENALSLLLGQTA----QTIQRGKIDNQS---LPTNLSTGVAISMLNN 292 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHW--SFGP 328 R D+ E LA + A+S YPSLS+ G+ T+ + PG W S Sbjct: 293 RADVHAAEMNLAQCFYNVQTARSRFYPSLSITGTGVFTNSSGMGIVNPG---KWLLSTVG 349 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--------EDK 380 L PIF KG+I + ++ A+ ++ TWQ VLNA EV NAL N E K Sbjct: 350 SLVQPIFAKGQIVAGLKVAQMKYEQALNTWQNKVLNAGNEVSNALVKYNSAVTKSELESK 409 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 +I T K+++ + + +Q S L+++ ++ E+ +S V Sbjct: 410 RIAT--------LTKNVADTKLLLQQSNSSYLEVITAQQTLLNAELSKVTEDFTKMQSIV 461 Query: 441 DLYIAIGSG 449 LY A+G G Sbjct: 462 SLYQALGGG 470 >gi|167562607|ref|ZP_02355523.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 388 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 82/347 (23%), Positives = 172/347 (49%), Gaps = 26/347 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + + AA+E + + + + L PS A + R Sbjct: 29 WWKQYRSPALDSLVDEGLRNSPTLAAAEKSLTAAREQLRAQIGSSLLPSIDAGGQATRER 88 Query: 108 F--IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVIS 158 +P + GQL + + +DLFG R +L+ +D + Q++ A+ + + Sbjct: 89 ALGVPTFGPQTVLYDVFAGQLQASYTLDLFGAARFANRALSRRVDVSAYQLESARRALAA 148 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E++S +++ L ++ + ++ GA S ++ + ++E+ Sbjct: 149 NIVTAAVTSAALAEQVSTTERLVALAREQANDTAARYRLGAASHADMLNAQQSAAALEAS 208 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P L + ++ H ++ LLG Q ++ +L++P + + +P+ L++ RP Sbjct: 209 LPALRQQWQTTRHALAVLLGRTPD------QASADLALADLHLPEDVPVVVPSTLLQARP 262 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYL 332 DIR E L + A++G+A + L+P LSL+ S+ N +P G WS G L Sbjct: 263 DIRAAEAGLQAAAAEVGVATAQLFPQLSLSASMGHAGFN-WPAMLSGAGAIWSVGASLTQ 321 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 P+F G + + R A ++ +++TVL A ++V + L +++ D Sbjct: 322 PLFHGGALLAQRRAARATYDAAVDQYKQTVLAAFQDVADRLAALDND 368 >gi|298483250|ref|ZP_07001429.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] gi|298270567|gb|EFI12149.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] Length = 458 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 214/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 19 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T Q + + W++ Sbjct: 76 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTASWEL 134 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 135 DVFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ +++++EA ++ + L++ ++++ LL P Sbjct: 192 AWKETVASTRALMNAGLANESAVLQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETPR 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 252 NYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 305 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 306 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 364 Query: 358 WQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G + Sbjct: 365 FQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 417 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 418 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 456 >gi|170703850|ref|ZP_02894544.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170131243|gb|EDS99876.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 363 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 165/338 (48%), Gaps = 21/338 (6%) Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ RR +ES+ A + A A+L + + L SY R I + + +D Sbjct: 16 YELDLFGRVRRSVESAQAGSEQARDDFANARLVLSADLASSYFALRELDTEIDVVKRSID 75 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 L +K ++ + GA S L L++ +++ + + L + I+TL+G PA Sbjct: 76 LQQKALDYVSARHELGAVSGLDLLQQRSQLDATHTQAQLLIQQRAQVETAIATLVGTPAP 135 Query: 243 EFLHYMQKQSNNFQPNLYIPIN-----IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 F P +PIN G+P+DL++ RPD+ E+ +A + A+IG+A++ Sbjct: 136 AFSL----------PPRVVPINAPALPTGMPSDLLQRRPDVASAERAMAAANAQIGVARA 185 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +P ++L+ I F G T WS G + P+F GK+K+ + A++ Sbjct: 186 AYFPRIALSPDIGWDA-TRFSGLFTVPALLWSLGASVSQPLFQGGKLKAGVDFAQAGYVA 244 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++++TVL A +EV+NA+T ++ + + AV+ +K +SL+ Y G +D Sbjct: 245 AQASYRQTVLTAFQEVQNAVTGLSVLAQAAQQASAAVDDARKLVSLAQDRYTGGLTPFID 304 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L ++ E + Q A V L A+G G++ Sbjct: 305 VLTAQQQLLTSERQAVQIQGQRAALVVFLAKALGGGWD 342 >gi|332884866|gb|EGK05121.1| hypothetical protein HMPREF9456_03034 [Dysgonomonas mossii DSM 22836] Length = 464 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 103/468 (22%), Positives = 230/468 (49%), Gaps = 35/468 (7%) Query: 8 FSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 F++ I LL C VG +Y +P + L + ++ N + + + F + L +L+ Sbjct: 6 FAICICLLLVVSCKVGKDYQRPELGLPEKYRNETDANNDTSALSHNPRDFFTNKYLLELI 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 A ++N +L A + I A+ + +V+ + P A I+ R+ + + +GQ + Sbjct: 66 DNAFEKNSDLLLAVQNIALAESTLGTVKLNYLPEINAQINSRYTKASQNSLSGQAGGNRE 125 Query: 124 -----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 W ID++G+ +R E +LAN + + +++ + Y + Sbjct: 126 SKDFNLSAGLTWNIDIWGKIKREKEEALANYLQSQEVRKAVQTKLVADIAKGYYNLLMLD 185 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++ IA++ L + + +++ G + L + +++A++ + I +E+S + + Sbjct: 186 EQLEIANRSKVLSDSTLTIMKIQYQVGDANILGIRQVDAQLNENKILISQIEQSISLQEN 245 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G ++ + ++ + + +P+ G PA L+ +RPDI+ E L S A+ Sbjct: 246 ALNVLCG----KYAGAITRKIEGNKEFISVPVE-GYPASLLASRPDIKAAELSLRASNAR 300 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +GI ++ +YP+++++ G +LT N F P + S + PIF+KG++K+ + Sbjct: 301 VGIQQAAMYPAINISAEGGLSSLTSSNWFSIPA-SLFGSLAGGITQPIFNKGRLKAQYEQ 359 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ +++ I +++ VL+ +V NAL + E +K + ++ ++ ++ + + + Sbjct: 360 AQIEREKEVIRFRQAVLDGYAQVSNALKNKEEVEKQFIFAKSREKVLEEGITSTQLLFMA 419 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQL----AKSYVDLYIAIGSGY 450 G + LDI+ ++ A + S+ + QL A + ++LY A+G G+ Sbjct: 420 GTVNYLDIITVQSAY----LQSSLQRVQLYTDKALADIELYYALGGGW 463 >gi|161522775|ref|YP_001585704.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346328|gb|ABX19412.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] Length = 508 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 201/455 (44%), Gaps = 29/455 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 CT + P +P F + + D WW + D +L + V+ ALQ N + Sbjct: 52 CTSIVKVDVPPQRDVPAAFEQVPAADGTQADLAHWWSQWQDPALARHVEDALQANTDVRV 111 Query: 78 ATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS------------TGQLDSD 123 A R+ A+ + +P S+ A H F NL+ S G + + Sbjct: 112 AQARVREARALAAVAESARYPSLSARAGGVHGF-GNLRDPSQMPDGSPDLDSYAGGITAG 170 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++D+FG+R + A L A + + ++ + + +Y++A+ + R+ + + L Sbjct: 171 WEVDIFGRRASDAQAAALLADAAQEKLRGTRVAIAGDVAQNYLEAQGLQRRLDLLDRSLV 230 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + +F G ++ + ++ +I + E++ P L + ++ L G P Sbjct: 231 TLHALQRYTDARFRAGQATRYDVARVNEQIVAREAERPALASQIDVRRRRLAILAGQPP- 289 Query: 243 EFLHYMQKQSNNFQPNLY-IP-INIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 Q+ + P + +P + G +P+ ++ RPD+R + A++G AK+DL Sbjct: 290 ------QQAAPLAAPGPFRVPAVPAGELPSAVLERRPDVRATAAMVRAQAARLGSAKADL 343 Query: 300 YPS--LSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 P L+ G H + PG T G LPIF+ G+I+SNI ++ Q Sbjct: 344 LPRFYLTFVGLDGRVHLDGLPGLSGTGGLIGIGADLPIFNAGRIRSNIEANDARLQAALA 403 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +T+L ++EV++A + + +L +E+ +++ + Y GR +L D+LD Sbjct: 404 QHDKTLLQTLEEVDSAYGVRHGFDQRSERLAATLEIARRNADEARRLYEGGRRTLQDVLD 463 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E +L ++ A + V LY+A+G G++ Sbjct: 464 ARIDALRREDELVQSQTGEALATVRLYLALGGGWS 498 >gi|91776894|ref|YP_546650.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91710881|gb|ABE50809.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 467 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 209/476 (43%), Gaps = 40/476 (8%) Query: 1 MNILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI-DTL--KWWESF 56 MN + +L + L L C+ P Y +P P+ F G++ +TL W F Sbjct: 1 MNYKLIVMTLTLALALGACSYMPTYERPQSPVTEV-FPAGDADTTSQAANTLLPHWRHFF 59 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASIS 105 D +L KLV +AL N I A + A + R++LFP + A+IS Sbjct: 60 KDEALQKLVTMALLNNRDISIAVANVEAYQALYRIQRSELFPQLSATGGGTRSRTPAAIS 119 Query: 106 HRFIPNLKTNSTGQLD-SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISK 159 + T + + + +++DLFG+ R + E AN ++ + A L++I+ Sbjct: 120 PANQDWMLTQYSASIGLTAYELDLFGRVRSLNTQALEQYFANTEN----LKAAYLSLITS 175 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + SY + + I+ + L Y+++ +L F G S +SL + +++++ + + Sbjct: 176 IGESYFTWQSDSRLLEISQRSLKTYQQSYDLMETNFKTGLISAMSLKQAAIQVETMRASV 235 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + +++ + L+G T+ + +G+ ++++ RPDI+ Sbjct: 236 EQYTRLVEQDINALQLLVG---TKDPIQLDSPKTMLATGQLEDFPVGLSSEVLLARPDIQ 292 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +P ++L+ S+ + F + WSF P++ +PIF Sbjct: 293 AAEHQLKAANANIGAARAAFFPRIALSASLGTSSSELSGLFGSGSGAWSFSPQISIPIFT 352 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL----TSINEDKKIVTKLQHAVEL 392 G++K+N+ AE Q +++ + A KEV N L T N+ HA Sbjct: 353 AGRLKANLDYAEIQKDIQIKQYEKAIQAAFKEVANGLAARKTYTNQLDAQTAYFDHATAY 412 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ Y G L +LD +R+ + E +R S + LY A+G Sbjct: 413 ----LGMAQNRYESGVDDYLTVLDAQRSVYQAEQQFVTTQRDKLISELQLYKALGG 464 >gi|152973210|ref|YP_001338356.1| copper/silver efflux system outer membrane protein CusC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150958059|gb|ABR80089.1| outer membrane transport protein involved in copper (silver) tolerance [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 497 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 108/464 (23%), Positives = 213/464 (45%), Gaps = 41/464 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL---INIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + + W F D + L+ Sbjct: 48 IFALTGCLSLAPDYQRPAAPV-PQQFSLSQNKLVTAKVGYQETGWRTFFVDPQVKSLIST 106 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD +P S + LK ++T L+ Sbjct: 107 ALTNNRDLRMATLKVQEARAQYRVTDADRYPQLNGDGSTTYGGKLKGDTTTSSDYAAGLN 166 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 167 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVANDT 226 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 227 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLGSY 286 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P + Q P+L I + RPDI E L + A IG A+ Sbjct: 287 QRLPDDSASSAVDLQGVTLPPSLSSAI--------LLQRPDILEAEHSLQAANANIGAAR 338 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +PS++L S++ + +N W+F PK+ LPIF+ G+ ++++ AE Q+ Sbjct: 339 AAFFPSITLTSSLSGSSSELSSLFNAGGAMWNFIPKIELPIFNAGRNQASLDLAEIRQQQ 398 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN----YRQGRY 409 Q + +++ + +A KEV +AL ++ + A E + S+++++ YR G Sbjct: 399 QVVNYEQKIQSAFKEVADALAL----RQSLADQIAAQERYLASLNITLQRATALYRHGAV 454 Query: 410 SLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S +++L +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 455 SYIEVLSAQRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 495 >gi|255008627|ref|ZP_05280753.1| multidrug efflux pump channel protein [Bacteroides fragilis 3_1_12] gi|313146361|ref|ZP_07808554.1| multidrug efflux pump channel protein [Bacteroides fragilis 3_1_12] gi|313135128|gb|EFR52488.1| multidrug efflux pump channel protein [Bacteroides fragilis 3_1_12] Length = 452 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/379 (24%), Positives = 184/379 (48%), Gaps = 22/379 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 IF L ++L GC Y + +P +I + + +L W E F D L L++ Sbjct: 6 IFILSTLMLTGCGTYSRYHRADIPTENLYRNIPEDMDTTTLASLSWREMFTDRKLQSLIE 65 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF-IPNLKTNSTGQLDS 122 LQQN + A R+ AA+ +++ + PS + +R+ KT + G S Sbjct: 66 TGLQQNTDLNVARLRVEAAEATLMTAKLSYLPSLGINAEGGDNRYDGTTAKTYNVGATAS 125 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++D+FG+ + ++A L + + +++ + SY + +I ++ L Sbjct: 126 -WELDIFGKLTAAKRGAVAALQGSRDYQQAVQTQLVATIADSYYTLVVLDAQRTINNRTL 184 Query: 182 DLYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + ++ + L LK G ++ +++ +A + +ES + KS + +S +L P Sbjct: 185 ENWRATVRTLEALKKV-GKANEAGVLQAKANVMQLESSQLAICKSISETENALSAILAMP 243 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + ++S+ + + I+IG+ L+ NRPD+R E +LA + +A+S Y Sbjct: 244 SQSI-----ERSSLAEASFPDTISIGVSLQLLSNRPDVRQAEMELAQAFYATHVARSAFY 298 Query: 301 PSLSLNGSIALTHDNSF----PGYNTHWSFGP--KLYLPIFDKGKIKSNIRRAESSAQEQ 354 P+++L+G++ T++ PG W F L P+F++G +N++ A++ +E Sbjct: 299 PNITLSGTLGWTNNGGGAITNPG---QWLFNAIGSLTQPLFNRGANIANLKIAQTKQEEA 355 Query: 355 YITWQETVLNAIKEVENAL 373 + +Q+++LNA KEV +AL Sbjct: 356 KLLFQQSLLNAGKEVNDAL 374 >gi|325168760|ref|YP_004280550.1| outer membrane efflux family protein precursor [Agrobacterium sp. H13-3] gi|325064483|gb|ADY68172.1| outer membrane efflux family protein precursor [Agrobacterium sp. H13-3] Length = 492 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 120/442 (27%), Positives = 203/442 (45%), Gaps = 25/442 (5%) Query: 10 LFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +F ++L+ C GP ++ LP QFS S + + WW + ND+ LN +V Sbjct: 31 VFALVLSSCHQGGPTFSDIAPSELPPQFSP-MSGQRPSPKSEAWWLALNDSQLNSIVARV 89 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTNSTGQ--LD 121 Q NLT+ QA ER+ AA S + L PS S S R + + Q L+ Sbjct: 90 QQGNLTVAQARERLAAAAAISHSASSGLRPSVGLSGSATGSSTRTKVDDISRRPAQFNLE 149 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQ 179 + W+I LFGQ + + S A+LD A D+ AKL+V+++ SY+ R + + A Sbjct: 150 TGWEIALFGQDKLAQHS-ADLDGYMAAEDVNAAKLSVVAEAATSYVRLRALQHQRQNADL 208 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + K +++ ++ G +KL + ++ L + + ++ L G Sbjct: 209 LWSAKAKARDITTVRSRSGLATKLEAQSATDDTAAMAQQKRVLNNAIADEIQRVAVLQGA 268 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 + K QP +PAD++R RPD+R E + + A++GIAKSDL Sbjct: 269 AEDDAALSAIKP----QPVASKAPVTTVPADILRQRPDVRRAEFAVLKAGAEVGIAKSDL 324 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 YP L L+G I + S + GP L +PIFD GK + ++ +E + ++ Sbjct: 325 YPKLHLSGMIGIGSPVSGSIFGVM--GGPSLQMPIFDYGKRLDVVEAKKAQLREAVVAYR 382 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + VL A E +AL + + +++ +KS++ + + R+G S +L + R Sbjct: 383 QAVLVAHGEASSALRAFLTARLETARVRSVHSTAEKSVAEAQLLSREG-LSDASVL-VTR 440 Query: 420 ATAKVEVDLSIAKRQLAKSYVD 441 A E+ +RQL ++ D Sbjct: 441 HLAAAEI-----RRQLTEAIKD 457 >gi|167569796|ref|ZP_02362670.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 371 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/346 (23%), Positives = 170/346 (49%), Gaps = 24/346 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + + AA+E + + + + L PS A + R Sbjct: 12 WWKQYRSPALDSLVDEGLRNSPTLAAAEKSLTAAREQLRAQIGSSLLPSIDAGGQATRER 71 Query: 108 F--IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVIS 158 +P + GQL + + +DLFG R +L+ +D + Q++ A+ + + Sbjct: 72 ALGVPTFGPQTVLYDVFAGQLQASYTLDLFGAARFANRALSRRVDVSAYQLESARRALAA 131 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E++S +++ L ++ + ++ GA S ++ + ++E+ Sbjct: 132 NIVTAAVTSAALAEQVSTTERLVALAREQANDTAARYRLGAASHADMLNAQQSAAALEAS 191 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P L + ++ H ++ LLG Q ++ +L++P + + +P+ L++ RP Sbjct: 192 LPALRQQWQTTRHALAVLLGRTPD------QASADLALADLHLPEDVPVVVPSTLLQARP 245 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLP 333 DIR E L + A++G+A + L+P LSL+ S+ N G WS G L P Sbjct: 246 DIRAAEAGLQAAAAEVGVATAQLFPQLSLSASMGHAGFNWPAMLSGAGAIWSVGASLTQP 305 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 +F G + + R A ++ +++TVL A ++V + L +++ D Sbjct: 306 LFHGGALLAQRRAARATYDAAVDQYKQTVLAAFQDVADRLAALDND 351 >gi|146302143|ref|YP_001196734.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146156561|gb|ABQ07415.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 478 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 107/485 (22%), Positives = 210/485 (43%), Gaps = 47/485 (9%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 NI A + ++ +AGC K +P ++ N + +N +KW F D +L Sbjct: 6 NIKYAGLACLLLSIAGCKTTTIAEKTENKTVPENYA-DNGLDTLNTGKVKWRSYFTDENL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH----------- 106 L+ IAL+ N + + I A+ + + + + P S+ A ++ Sbjct: 65 ENLIDIALKNNQELNSTLQEIEIARSEVKARKGEYLPFVGFSAGADVTKSGRYTSTGSGE 124 Query: 107 --------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNV 156 R P+ N L S W+ID++ + + + N L S + + N+ Sbjct: 125 ATTEIMPGRETPDPLPNYRFALTSSWEIDIWNKLHTAKKAALNRYLGSIEGK-NFVVTNL 183 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ SY + ++ I Q +D+ +++ ++ ++L++ + EA+I S + Sbjct: 184 IAEIADSYYELLALDNQLEIIRQNIDIQTNALKVVKIQKEAARVNELAVRRFEAQILSTQ 243 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S +++ + I+ LLG F + + SN F I+ G+P+ L+ NRP Sbjct: 244 SLQFGIQQQITETENKINFLLG----RFPQKIARNSNTFSSITPADIHAGVPSQLLENRP 299 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW----------SF 326 DI+ E +L + I AK+ YPSL ++ I + +N + S Sbjct: 300 DIKKAEMELIAAKLDIKAAKAKFYPSLGISAGIG------YEAFNAKYLLTSPESLLYSI 353 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L P+ ++ IK+ A + + ++ T++NA EV N L+ I K Sbjct: 354 AGDLVAPLINRNAIKAEYLTAGAKQIQAVYNYERTLVNAYVEVANQLSKIQNTAKSYDLK 413 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 VE +S+ +S + R +++L ++ + + +L K+Q ++V++Y A+ Sbjct: 414 SKQVEALNESVQISTNLFSSARADYMEVLLTQKDALESKFELIETKKQQMNAFVNIYKAL 473 Query: 447 GSGYN 451 G G+N Sbjct: 474 GGGWN 478 >gi|121598079|ref|YP_990917.1| ABC-type export system, outer membrane channel protein [Burkholderia mallei SAVP1] gi|238563267|ref|ZP_04610464.1| ABC-type export system, outer membrane channel protein [Burkholderia mallei GB8 horse 4] gi|121225877|gb|ABM49408.1| ABC-type export system, outer membrane channel protein [Burkholderia mallei SAVP1] gi|238521054|gb|EEP84509.1| ABC-type export system, outer membrane channel protein [Burkholderia mallei GB8 horse 4] Length = 779 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 96/408 (23%), Positives = 187/408 (45%), Gaps = 39/408 (9%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTL---K 51 L AI L+AGC VGP++ P P + T+F+ ++ + D Sbjct: 17 LAAIALGCAALVAGCAVGPDFIAPARPAVDAYVPDGAARTRFAASDATQTLAPDAPFPDA 76 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 77 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALITGAGVFYPQADAQAGASRQRY 136 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 137 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 193 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 194 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 253 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 254 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 309 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 310 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 369 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 P+F G + + A + E +++TVL+A +V + L +++ D Sbjct: 370 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHD 417 >gi|224824885|ref|ZP_03697991.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224602556|gb|EEG08733.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 474 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/473 (23%), Positives = 212/473 (44%), Gaps = 42/473 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPH-MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I ++ LLAGC P P L+P + + ++ +WW ++D +LN+LV Sbjct: 7 ICTVLASLLAGCAT-PALQPPAPTELVPASYQHAGAPAAHDLPR-QWWRLYHDATLNQLV 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-----------------HRF 108 + L+ N A R AA+ AD P A + H+ Sbjct: 65 ETTLRDNPYTQVAHLRQIAAEAQTRLANADRLPQLNAGVGFSNSRTSTNTALGQILGHQT 124 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 I K T D+ W+ID++ + + + ++ A +++ A + + + ++ +Y Sbjct: 125 ISGDKI--TAGFDAAWQIDVWNRVGYAVAAAKAGVEAEQAFARMVEQTLSWEVATTYWQY 182 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + +++ I + + +F G +S+L L + E+K+ + +I K Sbjct: 183 RLAESDLTLLTDIRQQRAEAESVQAGRFDAGLSSELDLARARLELKNADVEIEDARKRLS 242 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 + H ++TL P EF + + + P+ +P I+ G+PA ++R RPD+ + + Sbjct: 243 LAEHELATLTVKPVAEF--SVPRDAAYRLPD--VPAISPGLPASILRQRPDLAQSAQNIR 298 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGP-KLYLPIFDK 337 +A+ IA + YPS+SL G+ LT+ +S ++ GP + LPI D Sbjct: 299 ALLAQKEIADTAFYPSISLTGNFGFASMELRNLTNSDS-----RQFTLGPLAISLPILDG 353 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I++N + A++ QE + +L A++EV++ALT + + L A+E ++ Sbjct: 354 GRIRANQKIADARYQEALNVHKVQLLIALREVDDALTEVESCRTQAGLLDAALESARRVS 413 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ Y +G + L++ ER + E+ + + + L +G G+ Sbjct: 414 LLAKARYDKGAVNYLEVTQAERDLSTAELKFRRNQLKGLLASTQLVYVLGGGW 466 >gi|262380208|ref|ZP_06073363.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262298402|gb|EEY86316.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 485 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/448 (24%), Positives = 200/448 (44%), Gaps = 19/448 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQF--SIGNSKNL-INIDTLKWWESFNDTSLNKLVKIAL 69 L GC V Y +P++ + P F S N K + ++ +WW F D LN LV L Sbjct: 36 LVGCAAIVKTPYEQPNIQI-PGSFQNSPVNGKQIHADVYADQWWTLFGDQQLNTLVNQVL 94 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQLD----SD 123 N + A + A+ R P A +S HR N + + Sbjct: 95 ASNTDLAVAGLTLRQARLRAELARNAELPRVNAGVSTGHRIDLNSGDDQAQGVSLSSGVS 154 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R E++ + + ++I Y + ER+ + +Q L Sbjct: 155 YEMDLFGRLDRQTEAARWEAAATAEDLQATAQSLIGNTANLYWQLGYLNERLVVQNQNLQ 214 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K ++L +++ GA S L + + E ++S + + L++ ++ LL P Sbjct: 215 SSQKLLDLVRVQYRAGAVSGLEVAQAEQAVQSQRASLSQLQQQLVETRTALAILLQIPVQ 274 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + Q P + +P I G+PA+++ RPD+R E +L ++A ++ YP Sbjct: 275 Q----LNIQEPQRLPVIRLPVIGAGLPAEILARRPDLRAAELRLHQALATKDATRASYYP 330 Query: 302 SLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S+SL G++ T + + N + G L LP +K ++ +E ++ + +++ Sbjct: 331 SISLTGNLGSTSTSLTQLLQNPALTLGANLSLPFLQWNDMKRDLAISELDYEKSILNYRQ 390 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A +VENAL++ E K V + + L +++ L + YR G +L + LD + Sbjct: 391 TLYQAFADVENALSARTELDKQVRYQEQNLALAERTERLYEVRYRNGAVALSNYLDAQET 450 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 T + L AK+ +YV L A+G Sbjct: 451 TRNARIALVQAKQNQYNAYVTLMQALGG 478 >gi|206559556|ref|YP_002230317.1| putative fusaric acid resistance outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198035594|emb|CAR51480.1| putative fusaric acid resistance outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 486 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 100/451 (22%), Positives = 205/451 (45%), Gaps = 36/451 (7%) Query: 10 LFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L+ +L+GC +GP L +I ++ + T WW ++ DT LN+L+ Sbjct: 13 LYFAVLSGCADMRGIGPLSNLQDADELDAGSAIRTARAPSPLPTGGWWRAYGDTQLNRLI 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---------SHRFIPNLKTNS 116 AL N ++ A +R+ A+ + A+ P S+ + P NS Sbjct: 73 DTALAHNPSLSAAHDRVRVAQAMARAAHANELPKVDGSLRLLRQHWPDDAYYGPGALGNS 132 Query: 117 -----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHF 170 TG ++ W IDL+G+ ++I SS + A ++A +L + + ++ +YID Sbjct: 133 NTWNNTGGMNLAWHIDLWGRDKNIASSARDRFRAREADELAARLQLQTNIVYAYIDLALN 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ +L +K +EL + G ++L L + E+ + I + + +N Sbjct: 193 IALLANEQANTELQQKTVELVRKRLKAGIATQLELSEAESPLPGYVKRITAWKAAVELNQ 252 Query: 231 HNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H ++ L+G P +Q+ F+ + +P + P++L+ RPD+ ++ Sbjct: 253 HQLAALIGEGPGAG--TTIQRPQIVFEKPIGLPSTL--PSELVGRRPDVIAARWEVESRA 308 Query: 290 AKIGIAKSDLYPSLSLNGSI-----ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + +A++ YP++ L SI A + N WS GP L LPIF+ G++++ + Sbjct: 309 RGVDVARAAFYPNIDLLASIGSFGAAAGFIDFLRAANGGWSAGPALTLPIFEGGRLRARL 368 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVELHKKSM 397 A + E + ++ AIK++ + + T ++ D++ ++ +++L + S Sbjct: 369 AAATAEYDEAVDRYNRAIIEAIKDIADNVVRVRSLATQMDADRRSISVAARSLDLARISQ 428 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDL 428 ++NY+ + ++L + + + EVDL Sbjct: 429 RRGLVNYKNVLVAQANLLQAQNSAIRTEVDL 459 >gi|121604350|ref|YP_981679.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120593319|gb|ABM36758.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 504 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 104/469 (22%), Positives = 214/469 (45%), Gaps = 38/469 (8%) Query: 9 SLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIG-NSKNLINIDTLKWWESFNDTSLNK 63 L L+GC + P+ + P S+G N+ +WW F D +LN Sbjct: 22 GLIATGLSGCADMSGIAPQASLRDAP------SLGLNTATAPAPVAAEWWRDFGDETLNG 75 Query: 64 LVKIALQQNLTI----------LQATERINAAKENILSVRADLFPSSY---ASISHRFIP 110 LV AL+ + ++ AT+ +AA ++ + DL Y ++ Sbjct: 76 LVTKALETSPSLKLAQARLARAQAATDVAHAATLPQVNGQLDLTRQRYTANGAVPPPLAG 135 Query: 111 NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +++ ++T QL + W++D FG+ R ++++L + +A A A++ + S++ SY Sbjct: 136 SIRESATAQLAASWELDFFGKNRTALDAALGSAKAAQADAQAARVLLASQVARSYFQLVR 195 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ +A + L ++ ++L + G ++L L + E + + +++ + Sbjct: 196 LNEQSGVASRTLAQREETLKLVRDRVNAGLDTRLELRQSEGGLPEARLQLEAVQEQMALT 255 Query: 230 VHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + ++ LLG P A+ + Q N + + IPADL+ R DI ++ Sbjct: 256 RNALNALLGQPNSASALVPSAQSAIKN------VALTPNIPADLLGRRADIAAARWRVEA 309 Query: 288 SVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S + AK+ YP+++L G ++ N + W GP L LPIF+ G++++N+ Sbjct: 310 SSKDVVNAKTQFYPNINLVAFAGFSSIGLGNLLNSGSQQWGVGPALRLPIFEAGRLRANL 369 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R + ++ V++A+++V + + S + + + A + + + +++ Y Sbjct: 370 RGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGRQQAEQRAAQDAAESAYGIAVQRY 429 Query: 405 RQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + G + L++L E + A+ + + +A R L + V L A+G GY P Sbjct: 430 KAGLGNYLNVLTAETSVLAQRRLAVDLAGRAL-DTQVALIRALGGGYAP 477 >gi|73541507|ref|YP_296027.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72118920|gb|AAZ61183.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 503 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 222/474 (46%), Gaps = 37/474 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK------NLINIDTLKWWESFND 58 RA+ + +VLLAGC P Y P + L G S + I D WW ++ D Sbjct: 26 RALATGLVVLLAGCAAAPPYRPPPIDLPDAYKEAGASPARPGGPDAIAPD---WWRAYGD 82 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTN 115 +L++L + T+ +A ++ A+ + R+ FP+ A + R N+ Sbjct: 83 ATLDRLEARVEVSSETLRKAVAQLQDAQAQARAARSAYFPTVTAGAAFSRSRVSDNVVGR 142 Query: 116 S-TGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 S G+ +D W+ DLFG+ ++++ A ++ V +L + ++L Y Sbjct: 143 SLAGKTTNDYLLGVGASWEPDLFGRIGSTVDAAEARAQASAEDVAAVRLGLQAELADDYF 202 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R ++ Q ++ Y +EL ++ G ++ + + A+++S + + L + Sbjct: 203 GVRSLDREAALLQQTIEAYTSVVELVTNRYRGGIATEGDVAQARAQLESTRAQLSDLRLN 262 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++TL+G PA+ F + P P +P+ L+ RPD+ E+++ Sbjct: 263 RTQLEHALATLVGEPASRF--SLAPADGTAHPEQLPPFPAALPSQLLERRPDVAAAERRV 320 Query: 286 ADSVAKIGIAKSDLYPSL--SLNGSIALTHDNSF-PGYNTHWSFGPKLYLPIFDKGKIKS 342 A + A+IG+A++ +PSL +L G + + S+ + W+ GP L + D G+ ++ Sbjct: 321 AAANAQIGVARAAFFPSLMLTLGGGLESSSLASWLTAPSRFWAIGPALAGTLLDGGRRRA 380 Query: 343 NIRRAESSAQEQY----ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 E SA+ Q+ ++ TVL A++EVE+ +I + + A + +++S Sbjct: 381 G----EDSARAQFDASAADYRSTVLRAVQEVEDGYAAIQALQDEARSQRIATQSSGRALS 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYN 451 + + YR+G + LD+ ++ A+ + L S+ +RQL S V L A+G G+ Sbjct: 437 IGLDRYRKGAVAYLDVNILQAASLSSDRALESVRRRQLTAS-VGLIKALGGGWE 489 >gi|124268907|ref|YP_001022911.1| putative outer membrane protein [Methylibium petroleiphilum PM1] gi|124261682|gb|ABM96676.1| putative outer membrane protein [Methylibium petroleiphilum PM1] Length = 480 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 106/415 (25%), Positives = 207/415 (49%), Gaps = 22/415 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW F L +L+ A + T+ A ER+ A+ + S A LFPS S S + R Sbjct: 65 WWRGFQSDELARLIDAAQAGSPTLAIAAERVQQAEIAVRSAGATLFPSVSVSGNSGARRA 124 Query: 109 IPNLKTNSTGQ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 P +++ L ++IDL+G+ ++ + A+L ++ ++ A+L++ + + Sbjct: 125 DPGPGFDASTSKSSSVSLGVSYEIDLWGRLAAGVKGAEASLAASRYDLETARLSLSTGVA 184 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + RI IA L + ++ + ++ GA S L + + + S + + Sbjct: 185 NAYFQVLALRMRIEIARDNLAIAERVFGIVESRYRNGAASALDVSRQRITVLSQRATLEP 244 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 LE R V ++ LLG P +Q ++ +F+ G+P++L+ RPD+ Sbjct: 245 LEVQERQTVTALAILLGRPP----QALQVETRSFERFAVPEAGAGLPSELLVRRPDLASA 300 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGK 339 E +LA + A + A++ L PS+SL+GS L N S G + +FD G+ Sbjct: 301 EAQLAAADADVAAARAALLPSVSLSGSAGLASTALLSLANPSSSLGLSASIVQTLFDGGR 360 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV-ELHKKSMS 398 +++ + ES+ ++ +++ + A+KEVE+AL + ++ + Q A+ + ++S+ Sbjct: 361 LRNQVALGESARRQLVESYRLAIYTALKEVEDALGNAVRNRG-QEQAQLAIRDEAQRSLR 419 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 L+ + YR+G L +LD +R T +D +A+ +LA+ + +DL+ A+G G++ Sbjct: 420 LAELRYREGADDLTSVLDAQR-TLFSSID-QLAQLRLARLTAALDLFKALGGGWS 472 >gi|134291570|ref|YP_001115339.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134759|gb|ABO59084.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 486 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 201/455 (44%), Gaps = 29/455 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 CT + P +P F + + D WW + D +L + V+ ALQ N + Sbjct: 30 CTSIVKVDVPPQRDVPAAFEQVPAADGTQADLAHWWSQWQDPALARHVEDALQANTDVRV 89 Query: 78 ATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS------------TGQLDSD 123 A R+ A+ + +P S+ A H F NL+ S G + + Sbjct: 90 AQARVREARALAAVAESARYPSLSARAGGVHGF-GNLRDPSQVPDGSPDLDSYAGGITAG 148 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++D+FG+R + A L A + + ++ + + +Y++A+ + R+ + + L Sbjct: 149 WEVDIFGRRASDAQAAALLADAAQEKLRGTRVAIAGDVAQNYLEAQGLQRRLDLLDRSLV 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + +F G ++ + ++ +I + E++ P L + ++ L G P Sbjct: 209 TLHALQRYTDARFRAGQATRYDVARVNEQIVAREAERPALASQIDVRRRRLAILAGQPP- 267 Query: 243 EFLHYMQKQSNNFQPNLY-IP-INIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 Q+ + P + +P + G +P+ ++ RPD+R + A++G AK+DL Sbjct: 268 ------QQAAPLAAPGPFRVPAVPAGELPSAVLERRPDVRATAAMVRAQAARLGSAKADL 321 Query: 300 YPS--LSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 P L+ G H + PG T G LPIF+ G+I+SNI ++ Q Sbjct: 322 LPRFYLTFVGLDGRVHLDGLPGLSGTGGLIGIGADLPIFNAGRIRSNIEANDARLQAALA 381 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +T+L ++EV++A + + +L +E+ +++ + Y GR +L D+LD Sbjct: 382 QHDKTLLQTLEEVDSAYGVRHGFDQRSERLVATLEIARRNADEARRLYEGGRRTLQDVLD 441 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E +L ++ A + V LY+A+G G++ Sbjct: 442 ARIDALRREDELVQSQTGEALATVRLYLALGGGWS 476 >gi|187921617|ref|YP_001890649.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187720055|gb|ACD21278.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 479 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 116/470 (24%), Positives = 207/470 (44%), Gaps = 49/470 (10%) Query: 17 GCTVGPEYTKPHMPLL-------------PTQFSIGNSKNL------INIDTLKWWESFN 57 GCT+ P Y +P P+ ++ S + + +DT W F Sbjct: 20 GCTLDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVDT-AWRSFFR 78 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNS 116 D L +L++IAL N + A + + RA L PS AS S R T+S Sbjct: 79 DERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQGVTSS 138 Query: 117 TGQLD---SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYI----DAR 168 L+ + W+ID FG+ R ++ +L N + A ++++I+ + Y+ D R Sbjct: 139 VSDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATVATDYLTLLSDER 198 Query: 169 HFK---ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + + D+ K+ EL G +S L + + E + S ++ + + ++ Sbjct: 199 LLQLTEDTVKADQSTYDVTKRVQEL-------GNSSLLDVQQAENSLASAKASLASYRRA 251 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + +N+ +LG P + L + + +++ I G+P+ L+ RPDI E L Sbjct: 252 VAQDRNNLIAILGAPIPDDLPPARSFDDE---SMFADIGAGVPSLLLTRRPDIVQAEHAL 308 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P + L G+ + T + F W+F P + +PIFD G K+ Sbjct: 309 KAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSNKA 368 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ A+ Q + ++ T+ A KEV NALT+ V + V ++ +L+ Sbjct: 369 SLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRYYTLAEA 428 Query: 403 NYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S L LD +R TA+ ++ RQ + V LY + G+ Sbjct: 429 RYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQ--ANLVTLYKVLSGGW 476 >gi|256423782|ref|YP_003124435.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256038690|gb|ACU62234.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 461 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 215/465 (46%), Gaps = 40/465 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 + ++A C V Y P + Q+ + + +NI L W F D L L+ L + Sbjct: 12 VTVVAACKVTKTYQPPATDTV-AQYRGQSLSDTMNIARLPWRSYFQDEDLQALIAEGLGK 70 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHR-----------FIPNLKTNSTGQL 120 NL + A RI AA +A P + + ++ F+ +T Q Sbjct: 71 NLQLKAAITRIEAANVAYQQSKAAFLPQAGFNAGYKQSRLAYPQGFGFV-----TTTPQY 125 Query: 121 D----SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 D + W+ D++G+ R + ++ +L S A D+ +I+ + Y +++ Sbjct: 126 DMSLSASWEADIWGRLRSAKKAAYISLLSGEAARDVILTRLIADIAGHYYTLLVLDHQLT 185 Query: 176 IAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I + D+ ++E ++ L+ + + ++V+ +A + IP L+K R + +S Sbjct: 186 ILEKAADIRSADVEAMTELQRSN-VVNGAAVVQSQANEYAARVAIPVLKKQIRQTENALS 244 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG PA + + + P + IN G+PA L+ NRPD+R E + I Sbjct: 245 ILLGKPAGDIKR--GRLEDQLMP---VMINSGVPAQLLANRPDVRQAELAFRGAFESTNI 299 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWS--FG---PKLYLPIFDKGKIKSNIRRAES 349 A++ YPSL+L + + SF + T + FG ++ PI+++G+ KS ++ A++ Sbjct: 300 ARTAFYPSLTLTAAGGFS-SFSFGDWLTKNTGLFGNVAAGVFQPIYNRGQNKSRLKVAKA 358 Query: 350 SAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 Q + +Q+++L A +EV +AL +S+ E K +K A+E + +++ Y Sbjct: 359 EQQTAFYNFQQSLLTAGQEVSDALFTYSSVEERKAFRSKQIEALE-KSVDFTQTLLKY-S 416 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +D+L E++ +++ + + + + + LY A+G G+ Sbjct: 417 SNTNYIDVLTSEQSLLSAQLEQANDQLEQWMAVISLYHALGGGWQ 461 >gi|296116084|ref|ZP_06834704.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] gi|295977438|gb|EFG84196.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] Length = 497 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 112/471 (23%), Positives = 207/471 (43%), Gaps = 49/471 (10%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIALQQNL 73 CT+ P Y +P P+ + G + +TL W E F D L L+ IA+++N Sbjct: 21 CTMIPHYHRPVAPVSQNWPTYGGDSQPMAQNTLSANLGWSEFFTDPRLKALIAIAIRENR 80 Query: 74 TILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKTNST--- 117 + +A I A+ A LFP SS A +S F P L + Sbjct: 81 DLREAAANIRRAQGQFDIQHATLFPQIGGNGEAMFQAPSSAAGLS--FAPGLDAQANPPM 138 Query: 118 ------GQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G S ++IDLFG+ R E +L ++A A + +++IS++ +YI Sbjct: 139 FKYFNMGIGFSSYEIDLFGRIRSLSREAAEHALMQRENARAML----ISIISQVANAYIS 194 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E + ++ + +++ KF G +L+L + E +++ + + ++ Sbjct: 195 WLGDQEALKLSQATQASQQATLDMIRAKFEHGEADQLTLRQSETQVEQSAAFLADSQRRV 254 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + I+ L+G P + L S Q + + G+P+D++ +RPDI E L Sbjct: 255 AQDKNLITLLIGAPIPDNL---PPASPFGQQTMMQDLPPGLPSDVLEHRPDIISAEHDLK 311 Query: 287 DSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG AK+ YP ++L +G +L F T W P+L +P+ G+ N Sbjct: 312 AANADIGAAKAAFYPRITLTASDGISSLQPHRLFTAAATTWGVSPQLQVPLLTWGQNSGN 371 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ + + + +++T+ A +EV +AL ++ V S L+ + Sbjct: 372 LKASRAERNVKAAAYEKTIQTAFREVADALAGRAAYHDEGIQVDRLVASSADSYRLAKMR 431 Query: 404 YRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G S L L+ +R+ + ++ + ++K Q + V LY A+G G+ Sbjct: 432 YDAGTDSYLTSLESQRSLYQAQQWQIFVLVSKYQ---NLVTLYRALGGGWT 479 >gi|332283778|ref|YP_004415689.1| outer membrane efflux protein [Pusillimonas sp. T7-7] gi|330427731|gb|AEC19065.1| outer membrane efflux protein [Pusillimonas sp. T7-7] Length = 466 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/461 (21%), Positives = 213/461 (46%), Gaps = 27/461 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+ +L+GC KP P + +G + I T +WW+ + D LN+L+ Sbjct: 8 VFVAVLSGCAA----IKPGEPAVVKTDAVRLGLQDSAIAWPTEQWWQRYGDPQLNQLLGQ 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPN----------LKT 114 AL + ++ A R+N A + S RA P + Y RF N ++T Sbjct: 64 ALAGSPSLDAAQARLNLANAAVSSARAVRLPQANAGYQLTRERFSENYIYPPPYGGSMQT 123 Query: 115 NSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +++ +LD + +DL+G+ R H ++++ +A A +A+ ++S ++ SY + ++ + Sbjct: 124 DNSLRLDIGFDLDLWGRNRSHYAAAVSRQRAAEADAQMARNTLVSAVVQSYFNLQNALAQ 183 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + Q++ + ++++ + T G +++ + ++ + + + + + H I Sbjct: 184 QQVLGQLVTQLENVLDITRQRVTAGLDTEVETNQADSAVSAARVQLSQAATNADLLRHQI 243 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG + +Q+ P +P + IP L+ RPDI ++ S + I Sbjct: 244 AALLG-AGPQRGQEIQRAKLTQTPR-GVPDS--IPLSLLGRRPDIVAARLRVKASDSDIS 299 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK++ YP+++L+ G ++L N G + + GP + LPIF G + + + ++ Sbjct: 300 AAKAEFYPNVNLSAFAGFMSLGLSNLLEGGSQTYGVGPAITLPIFHGGALNAQLDARQAE 359 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +T+L A++EV +A ++I ++ ++ + +++ Y+ G + Sbjct: 360 RDLAIADYNQTLLTAVREVADATSAIQALQQQTLDQAASLRAITSAYKIAVNRYKSGLGN 419 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +L + K + + + + K L A+G GY+ Sbjct: 420 FVQVLQAQNEVQKQAILNTDMQTRAYKLDAQLATALGGGYD 460 >gi|325280869|ref|YP_004253411.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] gi|324312678|gb|ADY33231.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] Length = 449 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 98/414 (23%), Positives = 194/414 (46%), Gaps = 21/414 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW+ F D++L +L+ ++ N + A + I AK S + FPS S S ++ P Sbjct: 38 WWQFFGDSTLIRLIDKSVANNYNLQNAVKNIQLAKSRWRSQQGHFFPS--FSASAQYTPE 95 Query: 112 LKTNSTGQLDS-----------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 + D+ +W+ID+FG R+ ++ ++ +++ S+ Sbjct: 96 KSSLGIDHADNYYHIGQAGIEMNWEIDVFGNIRKGAKAQKEYYLASQEDYRGTMVSLASE 155 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI R +++++ +A L+ ++ + ++ K G TS L++ + + ++ + Sbjct: 156 VAMAYIRLRTYQQQLEVARNNLESQEEILRINEAKLAAGLTSNLTVAQSKGLWLQTKATL 215 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-GIPADLIRNRPDI 278 P LE S V+ ++ L G + + + Q N PI + GIPA+LIR RPD+ Sbjct: 216 PGLEASVYSEVNTLAVLTGEYSDSLRQALLQVHPLPQGN---PILMQGIPAELIRRRPDV 272 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIF 335 R E+ + A G ++D +P L G+ ++ F N W P + IF Sbjct: 273 RSAERTMDALAAAAGATRADWWPKFYLTGAFGYGNEYYKQFFKKENMTWQISPSIKWTIF 332 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 +I R+A+ E T+ +T+L A++EV++AL+S N+ + + + A++ K Sbjct: 333 SGRQIAQANRQAQIQLDEGINTYNQTLLTALQEVDDALSSYNKSLQQLDADRLALQEIKL 392 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ +M Y++G + ++LD +R E ++ + +Y A+G G Sbjct: 393 TLEYAMDLYKKGLTNYQNVLDSQRNVLNYENVYVNSQSATLLYMIQVYKALGGG 446 >gi|322506758|gb|ADX02212.1| outer membrane protein [Acinetobacter baumannii 1656-2] gi|323516629|gb|ADX91010.1| putative outer membrane protein precursor [Acinetobacter baumannii TCDC-AB0715] Length = 450 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 13/407 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRF 108 +WW F D LN+LV L++N L + T + + ++ + + L +S S H F Sbjct: 40 RWWTLFGDAQLNQLVTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTNSSVSTGHSF 99 Query: 109 IPNLKTNSTGQLDSD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N +S L +++DLFG+ R E+S + + ++I+ Sbjct: 100 DLNSGDDSAKGLSMSAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKL 159 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + ER + A Q L +K +L ++ GA S L L + E ++S ++ + +E Sbjct: 160 YWQLGYLNERYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIE 219 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 + I+ LL P + + Q P +P I G+PAD++ RPD++ E Sbjct: 220 QQLVETRTAIAVLLHEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAE 275 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIK 341 +L ++A K+ YPS+SL S+ + + N + G L LP +K Sbjct: 276 LRLRKALATKDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMK 335 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +I + ++ I +++T+ A +VENAL+S E K V + VEL +K+ L+ Sbjct: 336 KDIAISNLDYEKAIIQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTE 395 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + YR G +L +LD ++ T + L K+ +YV L A+G Sbjct: 396 VRYRYGAVALKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALGG 442 >gi|317404388|gb|EFV84808.1| multidrug efflux system outer membrane protein [Achromobacter xylosoxidans C54] Length = 493 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 117/471 (24%), Positives = 217/471 (46%), Gaps = 58/471 (12%) Query: 20 VGPEYTKPHMPLLPT----QFSIGNSKNL---INIDTLKWWESFNDTSLNKLVKIALQQN 72 VGP+Y +P + + Q + K ++D +WW ++D +LN LV N Sbjct: 31 VGPDYQRPALDVGAAYKEGQVEVPGWKRAEPRDDVDRGQWWRVYDDATLNGLVDNLNASN 90 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS-----------------HRFIPNLKTN 115 TI QA A + RA FP+ A + N + + Sbjct: 91 QTIAQAEANYRQALGLVRGARAGFFPTVGAGAGLTRSGSGGNGSSSSSAGGGNVSN-QYS 149 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG + W++D++G+ RR +ESS A+ ++ A + +L+ + L+ +Y+ R E+ Sbjct: 150 LTGNVS--WELDVWGRVRRSVESSEASAAASLADLAATRLSAQAALVQAYLQLRVLDEQK 207 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + Y+K+++L+ ++ G + + +++S + L+ H I+ Sbjct: 208 RLLDATVAAYEKSLQLTQNRYNVGVAGQSDVAVARTQVESTRAQSIDLDWQRGQYEHAIA 267 Query: 235 TLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIGIPADLIRNRPDIRYQEKKLADSVA 290 L+G + F + P +L +P I +G+P++L+ RPD+ E++ A + A Sbjct: 268 VLMGQAPSRF---------SLPPAPFSLQLPQIPVGLPSELLERRPDVAAAERRAAAANA 318 Query: 291 KIGIAKSDLYPSLSL-------NGSIA--LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 +IG+A++ +PSL+L NG A LT F WS GP L L IFD G + Sbjct: 319 QIGVAQAAWFPSLTLSADGGFRNGQFAELLTAPARF------WSLGPALALTIFDGGARQ 372 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + +A +S Q +++ L ++EVE+ L + + T + A+E ++S+ L Sbjct: 373 AQVEQARASYDAQAAAYRQAALTGLREVEDYLIQLRVMENEQTVQRRALESARESLRLMQ 432 Query: 402 INYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G L + ++ A + LS+ +L S V+L +A+G G+ Sbjct: 433 NQYKAGLVDYLSVAVVDATALSNERSALSLYGNRLIAS-VNLIVALGGGWQ 482 >gi|254443622|ref|ZP_05057098.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] gi|198257930|gb|EDY82238.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] Length = 473 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 102/418 (24%), Positives = 206/418 (49%), Gaps = 18/418 (4%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N + W F D L +L++++L+ N + A + A+ R+D PS + + Sbjct: 59 NTSDVGWRNFFTDPKLEQLIELSLENNRDLRVAALNVQRARAQYRIQRSDRLPSLNGTAA 118 Query: 106 HRFIPNLKTNSTGQLDSD-----WKIDLFGQRRHIESSL--ANLDSAYAQVDIAKLNVIS 158 + Q +++ ++IDLFG+ +++ + + L +A AQ + +L++++ Sbjct: 119 MTRAGGDASADIEQYEANLGIASYEIDLFGRVKNLSDAALQSYLATAEAQRSV-QLSLVA 177 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ E IA L+ Y++ ++S + G+ S L L +++ + S ++D Sbjct: 178 EVANAYLTFSSDLELQRIAQATLETYQEQYQISSRGYELGSVSSLELSQVKTLLASAQAD 237 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + +S L+G P L + Q + + G+P++ + RPD+ Sbjct: 238 LALYSGQIAQDTSALSLLIGSPVNSDLL---PDRFDLQVSGLAQLPAGVPSETLFRRPDL 294 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHD-NSFPGYNTH-WSFGPKLYLPIF 335 + E +L + A + A++ +PS++L GS+ +L+ + + G NT WSF P++ +PIF Sbjct: 295 QRMEHQLRAANANLAAARAAFFPSITLTGSVGSLSGELSDLFGDNTGTWSFVPQIRVPIF 354 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 GK++SN A T+++T+ KEV +ALT + ++ V+ + Sbjct: 355 QAGKLRSNRDVAALDRDIALATYEKTIQTGFKEVSDALTFSETLAQRRQAIEALVDAATE 414 Query: 396 SMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + SLS Y+ GR S L +LD +R +A+ + S+ + Q + ++LY +G G+N Sbjct: 415 TQSLSEKRYQAGRDSYLTLLDSQRTLYSARQALVQSLLREQ--SNRIELYKVLGGGWN 470 >gi|171319329|ref|ZP_02908441.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171095474|gb|EDT40442.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 497 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 208/460 (45%), Gaps = 34/460 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKN-----LINIDTLK---WWESFNDTSLNKLVKIAL 69 C+ P Y+ P + +PT ++ + D WW FND LN L Sbjct: 25 CSTLPPYSPPTV-AVPTHYAGAPAAQPGWQVAAPADAASRGAWWTVFNDADLNALEARVD 83 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN-LKTNSTGQLDSD-- 123 N T+ +A + A+ + A P+ A ++ R N L ++ G+ D Sbjct: 84 VSNQTVKKAVADLEQARATVDYQHAGFLPTVTAGVAQSRSRISRNKLGSSLAGKTTPDHQ 143 Query: 124 ------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W+ D+FG+ R + + AN D++ A + KL+V ++L Y R + + Sbjct: 144 VGVAASWEPDVFGRVRDAVAGAQANADASAADLQAVKLSVTAELATDYFALRSLDTQKRL 203 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + Y ++L + GA ++ + E ++++ + ++ S H I+TL Sbjct: 204 LDDTVRAYADALKLLQQQLAAGAIDASAVAQAETQLEATRTQDTDIDASRAQLQHAIATL 263 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G A+ F + Q+ + +P I G+P+ L+ RPDI E+++A + A+IG A Sbjct: 264 VGENASTFALPPRVQAFD------VPAIPAGVPSQLLERRPDIAAAERRVAAANAQIGEA 317 Query: 296 KSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P L L+ S L P + WS GP+L +FD G+ + +R A + Sbjct: 318 RAAFFPDLVLSASAGLESGFFTPWLTAPSLFWSLGPQLVGTLFDGGRRSATLRGAHAQYD 377 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +++TVL A ++VE+ L++++ + A + S+ L+ + G S L Sbjct: 378 GEVADYRQTVLGAFQQVEDQLSALDALASEAASQRRATDAADLSLRLTTNRFNAGAVSYL 437 Query: 413 DILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D++ + A + IA R++ ++ V L A+G G++ Sbjct: 438 DVVTAQTIALTNRRLADQIAARRM-EAAVGLLKALGGGWH 476 >gi|330983717|gb|EGH81820.1| rnd efflux system, outer membrane lipoprotein, nodt family [Pseudomonas syringae pv. lachrymans str. M301315] Length = 405 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/410 (24%), Positives = 205/410 (50%), Gaps = 23/410 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL----QATERINAAKENILSVRADLFPSSYASISHR 107 WW+ ++D L++++ +A + N I Q + + + + + L S S + Sbjct: 4 WWDRYHDAELSRIIDLAQENNQDIAVSHAQFAKAMAVLGQTMSAESPTLSGSGTGSKTSA 63 Query: 108 FIPNLKTN-STGQLD--SDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPS 163 N++ + S+ Q+ + ++ D++G+ + SS+++ +SA + + + ++++ Sbjct: 64 NTANVRDHVSSHQVAGLASYEFDMWGRLSNATNSSVSSAESAMKNILYVQKLIRNQVLTQ 123 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R +S+ ++ +D +K + +S + T G TS+L + + +A++ S+E T Sbjct: 124 YWTIRQMDAELSVLNEQIDSRRKQLSISESRLTYGVTSELDVEQSKADLASLERTRITTR 183 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + V +++ L G P + +S+N P+L +G+P+ L++ RPD+ EK Sbjct: 184 TNRDVYVQSLAILAGKPDLKV-----AKSSNI-PDLIAAPKLGLPSALLQRRPDLVMAEK 237 Query: 284 KLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 KL + + +A++ L+PS+SL G + + F ++ W+ G L LPIFD G Sbjct: 238 KLEAAGFDVAVARAALFPSISLTAQGGGRSGALSSLFGSGSSFWTLGYTLDLPIFDGGLR 297 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 S I +AE+S QE +Q+ +L A +V AL +++ ++ ++ + +K+M + Sbjct: 298 LSQIDQAEASQQELAAEYQKAMLTAFSDVNKALINLDGYQQQTPWMKDELAAAQKAMDFA 357 Query: 401 MINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + Y+ G +LD +R+ K +V L K S +LY A+G Sbjct: 358 LRKYQVGTIDYSTLLDTQRSLLDAKKADVGLRYGK---LISQANLYYALG 404 >gi|255320939|ref|ZP_05362113.1| outer membrane protein [Acinetobacter radioresistens SK82] gi|255302108|gb|EET81351.1| outer membrane protein [Acinetobacter radioresistens SK82] Length = 467 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/448 (24%), Positives = 200/448 (44%), Gaps = 19/448 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQF--SIGNSKNL-INIDTLKWWESFNDTSLNKLVKIAL 69 L GC V Y +P++ + P F S N K + ++ +WW F D LN LV L Sbjct: 18 LVGCAAIVKTPYEQPNIQI-PGSFQNSPVNGKQIHADVYADQWWTLFGDQQLNTLVNQVL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTGQLD----SD 123 N + A + A+ R P A +S HR N + + Sbjct: 77 ASNTDLAVAGLTLRQARLRAELARNAELPRVNAGVSTGHRIDLNSGDDQAQGVSLSSGVS 136 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DLFG+ R E++ + + ++I Y + ER+ + +Q L Sbjct: 137 YEMDLFGRLDRQTEAARWEAAATAEDLQATAQSLIGNTANLYWQLGYLNERLVVQNQNLQ 196 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K ++L +++ GA S L + + E ++S + + L++ ++ LL P Sbjct: 197 SSQKLLDLVRVQYRAGAVSGLEVAQAEQAVQSQRASLSQLQQQLVETRTALAILLQIP-- 254 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + Q P + +P I G+PA+++ RPD+R E +L ++A ++ YP Sbjct: 255 --VQQLNIQEPQRLPVIRLPVIGAGLPAEILARRPDLRAAELRLHQALATKDATRASYYP 312 Query: 302 SLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S+SL G++ T + + N + G L LP +K ++ +E ++ + +++ Sbjct: 313 SISLTGNLGSTSTSLTQLLQNPALTLGANLSLPFLQWNDMKRDLAISELDYEKSILNYRQ 372 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+ A +VENAL++ E K V + + L +++ L + YR G +L + LD + Sbjct: 373 TLYQAFADVENALSARTELDKQVRYQEQNLALAERTERLYEVRYRNGAVALSNYLDAQET 432 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 T + L AK+ +YV L A+G Sbjct: 433 TRNARIALVQAKQNQYNAYVTLMQALGG 460 >gi|327393532|dbj|BAK10954.1| outer membrane protein OprM precursor [Pantoea ananatis AJ13355] Length = 479 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 106/485 (21%), Positives = 211/485 (43%), Gaps = 55/485 (11%) Query: 1 MNILRAIFSLFI-VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWE 54 M + +F++F+ LAGC ++ P Y +P + T + NL +N ++W + Sbjct: 1 MTMTAKLFTVFLPCFLAGCVSLDPHYDRPVDAVKATNPTGEAYPNLQGTAVNYRAIRWQD 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-- 112 D+ LN++V +AL + + +A + +A RADLFPS A +S L Sbjct: 61 YVLDSQLNQVVGMALDSSRDLREAVASVKSAHAQYAEQRADLFPSLSAGVSGTRSRALTG 120 Query: 113 KTNSTGQLDS--------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISK 159 + N T +S +++DLFG+ R+ E+ L L+ A + +L V+ Sbjct: 121 EGNQTALGNSYSAEGSVSAFELDLFGKNQSLSRQQYETYLGTLEGARS----TRLTVLYN 176 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 I ++ + ++IA + + +++++++ + G S + + E +S ++D+ Sbjct: 177 TIDYWLQLAADRSNLAIAKETAESARQSLDVTRKRMQNGVDSMVDVASAETTYQSAQADV 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI------------GI 267 + S + + + ++G P P+ +P N+ GI Sbjct: 237 ASYTTSVAQDKNALDLVVGKPV---------------PDALLPQNLESIGHALRDVPAGI 281 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHW 324 +D++ NRPD+ E L + A IG A+++ +PS+SL S + + F W Sbjct: 282 SSDVLNNRPDVLQAEHNLKAANANIGAARANFFPSISLTASGGVGSADLASLFKNGVGIW 341 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF P + LP+F G + + ++ + ++++V A EV +AL +T Sbjct: 342 SFSPSISLPVFKGGYNVAYLNYTKAQKEYYVAAYEKSVQTAFSEVADALARRGTINDQLT 401 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ V + L+ + Y+ G + L+ L +R L ++ ++ Y Sbjct: 402 SQRNNVAASQIYAHLADLRYQSGVDTWLNALTAQRTLYSARTRLVSVEQAYYQNLNTFYK 461 Query: 445 AIGSG 449 +G G Sbjct: 462 VMGGG 466 >gi|91785789|ref|YP_560995.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91689743|gb|ABE32943.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 523 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 203/465 (43%), Gaps = 43/465 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C VGP+Y +P +P + ++ D WW + D LN L N Sbjct: 32 CVVGPDYKRPAA-TIPASYKEAAPGWKVAEPADQHDRGDWWTIYEDPQLNALEDRLNTAN 90 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---------------TNST 117 T+ Q A+ + RA FP+ AS N +NS Sbjct: 91 QTVAQFAAAYRQARALVGEARAAYFPTIGASAGATRSGNGSSSSRSSTATTSRSGISNSF 150 Query: 118 G-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 QLD+ W+ DL+G R + S A SA A + A+L+ + L +Y R Sbjct: 151 NVQLDASWEPDLWGSVTRSVNSQKAGQQSAAADLANARLSAQATLAQTYFSLRALDSTQK 210 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ Sbjct: 211 LLDDTVAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQAAAIDNGVQRAQDEHAIAV 270 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G PA+ F S P P + +P+ L+ RPDI E+K A + +IG Sbjct: 271 LVGEPASTF-------SIPPMPLTATPPAVPAQMPSALLERRPDIASAERKAAAANEQIG 323 Query: 294 IAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +A + +PSL+L+ S +NS + W+ GP+L +FD G ++ A Sbjct: 324 VAIAAFFPSLTLSASGGF--ENSVFSQLLTAPSRFWTLGPQLAATLFDAGLRQAQTDAAR 381 Query: 349 SSAQEQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ ++++TVL A ++VE+ L S I E + +V + AV+ ++++++ Y+ Sbjct: 382 AAYDGDVASYRQTVLAAFQDVEDNLASQRILEQEIVVQR--QAVDSARQALAIVTNEYKA 439 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +++L + E L Q S V L A+G G++ Sbjct: 440 GTVGYVNVLTAQTTAFTAEQKLENIAGQRMVSSVGLVKALGGGWD 484 >gi|297538957|ref|YP_003674726.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera sp. 301] gi|297258304|gb|ADI30149.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera sp. 301] Length = 516 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 122/484 (25%), Positives = 214/484 (44%), Gaps = 55/484 (11%) Query: 6 AIFSLFIVLLAGCTV------GPEYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFN 57 A S+FI CT P Y PL TQ G NL + WW+ FN Sbjct: 12 AFLSIFIC---SCTTIKSNNFKPTYPAAGWIEPLPATQPHNGKVTNLKH-----WWQQFN 63 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------------SSYAS 103 D L +L++ A + + I A R+ A++ + + L P S+Y S Sbjct: 64 DPVLVELIEAAQKVSPDIESAKARVTASQTAVTVANSQLLPNVTAEASVSRSRSGSAYPS 123 Query: 104 ISHRFI-PNLKTNSTGQLDSDWKIDLFGQR---RHIESSLANLDSAYAQVDIAKLNVISK 159 + + P T S G ++ W++D++G+ +H E A L + A A++ V ++ Sbjct: 124 TNGSMVFPTSTTASVGA-NASWELDVWGRNNASKHEEE--AKLVANIALWHDARVIVAAQ 180 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 Y + R + +A + D + LS L G + S + A+ ++ Sbjct: 181 TAKQYSNYRLCEGLNIVAKKNADSSHETARLSDLTARAGFLAPASASQSLAQA----AEA 236 Query: 220 PTLEKSFRMNVH-NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI---PADLIRNR 275 L+K + NI +L+ A + K + N + P +I I PA L+ R Sbjct: 237 ANLQKKQALECTLNIKSLVAITAIPEPTLVAKLATNVGV-IPTPADIEITELPAGLLAQR 295 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--------WSFG 327 PD+ E+ +A + +I ++ YP LSL G+IAL++D+ ++ + WS G Sbjct: 296 PDVLNAERNVAAASFEIASNEAQRYPRLSLAGNIALSYDSFSRTFSKNRSALDGLTWSIG 355 Query: 328 P-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P + LPIFD G +N+ A++ + +T++ NA++EVE AL ++N + Sbjct: 356 PLAVSLPIFDAGVRAANVENAKAQYEAAKVTYESVARNAVREVEEALATLNSTAQRFNDA 415 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A E K S+ + + +L ++ + RA+ + E +L K + +++ LY A+ Sbjct: 416 NQAAEGFKISLVATEARNKASLGNLFELEEARRASLQAENNLLTLKNERVLAWISLYRAM 475 Query: 447 GSGY 450 G G+ Sbjct: 476 GGGW 479 >gi|187922365|ref|YP_001894007.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187713559|gb|ACD14783.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 509 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 117/458 (25%), Positives = 214/458 (46%), Gaps = 32/458 (6%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNS--KNLINIDTL---KWWESFNDTSLNKLVKIALQQN 72 CT+GP+Y KP T + + K DTL WW + D SL+ L + N Sbjct: 36 CTLGPDYVKPTATTAATYKELDGTGWKPAQPADTLTRGAWWSVYADPSLDALEQQVASAN 95 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG---------QL 120 + A R AA+ + R+ FP A+ ++ R N+ ST Q Sbjct: 96 QNVQAAEARFRAARATVAQYRSSFFPVVSANGAYSRARSSENVLHKSTAGLTLNDYLVQA 155 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W+ DL+G+ R +E + A ++ A A L++ ++L Y + R + + Sbjct: 156 DASWEPDLWGRVSRSVEGAKAEAQASAADAQAALLSMQAELATDYFELRGLDQERQLLDD 215 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ YK+ ++L+ ++T G + + + + ++K+ ++ L H I+ L+G Sbjct: 216 TIEAYKQALDLTQHRYTGGIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAIAILIGQ 275 Query: 240 PATEFLHYMQKQSNNFQPNLYIPI--NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + F S P +PI G+P+ L+ RPDI E+ +AD A+IG+A + Sbjct: 276 SPSTF-------SLPVAPLTAVPIVAAAGVPSALLERRPDIAAAERHVADMNAQIGVATA 328 Query: 298 DLYPSL--SLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P+L S+ G + A + + WS GP L + D G S +A + E Sbjct: 329 AFFPNLILSVTGGLEATNYSQWLLAPSRLWSLGPTLAGTLLDFGGRASVKEQARAHYDES 388 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TVL+A +VE+ L ++ ++ T AV ++++++ Y+ G + LD+ Sbjct: 389 VAQYRQTVLSAFGQVEDNLAALRVLEQEATAQDDAVAAAQRALAVVSNRYKNGAITYLDV 448 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 + + E + +SIA+R++A S V L A+G G++ Sbjct: 449 VVAQTTALTNERNAVSIARRRMAAS-VALIKALGGGWD 485 >gi|332186545|ref|ZP_08388289.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332013528|gb|EGI55589.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 462 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 102/412 (24%), Positives = 180/412 (43%), Gaps = 18/412 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L LV AL N + A R+ A+ RA L P+ A + Sbjct: 49 QWWQAFGDPQLTALVTTALANNPDLGSAAARVEEARAQERLARAQLSPNITAGVPLSEAR 108 Query: 111 NLKTNSTGQLDS---------DWKIDLFGQRRHIESSLANLDSAY-AQVDIAKLNVISKL 160 + TG LD+ + DLFG+ R ++ A A D +L + S + Sbjct: 109 TVTAFGTG-LDALGAQPVVQASYDFDLFGRLRSARAAARAQLLATEAARDTVRLALASGV 167 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ R R+ IA + L + ++ + G TS L L + + E +S E + Sbjct: 168 ASGYVTLRALDHRLHIAEETLAARADALRIARRRAETGYTSNLELRQAQGEYRSTEQLVA 227 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIR 279 + + + +S L+G + L P I G+PADL+R RPD+ Sbjct: 228 AAQLAVTRQENALSVLIGGTPGPIARGLPID------RLIRPAIPDGLPADLLRRRPDLF 281 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E+ L + + A++ + PSL L GS + ++ T +S G + PIFD G+ Sbjct: 282 QAEQALVAADRSLDSARAAMLPSLGLTGSAGIVLSSALKNPLTIFSIGGSVLAPIFDAGR 341 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ + + + +++ L A +EV+++L S+ + L ++ + Sbjct: 342 LRAQADASAARRDQAAYAYRKAALTAFREVDDSLASVRRSGEQAVALAGQRTAQASALRI 401 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G S L+ LD +R E+ L+ A+ +Y+ LY A+G G++ Sbjct: 402 ASNRYRAGYSSYLEQLDAQRGLLNAELALAEAQANQLTAYITLYQAMGGGWS 453 >gi|163858546|ref|YP_001632844.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163262274|emb|CAP44577.1| probable outer membrane efflux protein [Bordetella petrii] Length = 490 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 107/463 (23%), Positives = 202/463 (43%), Gaps = 28/463 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNLINIDTLKWWESFNDTSLNKLVKI 67 L + +L+ C++ PE+ +P P+ P + G + N + L W + LV+ Sbjct: 11 LALGMLSACSLAPEHQRPVAPI-PAVWPTGAQTTANTSDFAELGWRSFVVNDEARGLVQA 69 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIP-NLKTNSTGQLDSDW 124 AL+ N + +A I AA+ RA P YA + P +L + + S + Sbjct: 70 ALENNRDLRKAVLSIEAARAQYRITRAARLPDVGIYAEGERQRGPADLNPDGQSGVQSSY 129 Query: 125 K---------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + IDLFG+ R + E++L + ++++I +++ +YI A R+ Sbjct: 130 QVGVGLNAYEIDLFGRVRSLSEAALREYLATEEAARTVQISLIGEVLEAYIAADGALRRL 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + L ++EL + G S L A ++ +D+ E+ ++ + ++ Sbjct: 190 QLTQETLTTRLASLELIRSRHDSGVASTLDYQDALALTEAARADLERTEREYQQARNALA 249 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A + ++ + G+ +DL+ RPDIR E +L A IG Sbjct: 250 LLVGNGADRNSLVRTVATGQIVSSV---VEAGLTSDLLTRRPDIRAAEYRLMARNADIGA 306 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS++L G+ F + WSF P++ LPIF G +N+ A+ Sbjct: 307 ARAAFFPSITLTGAFGTASSELSGLFDSGSRAWSFLPQINLPIFRGGVNVANLDLAKVRR 366 Query: 352 QEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 +++ + A +EV +AL +++ + + T+L E + L+ Y QG Sbjct: 367 DAAISDYEKAIQQAFREVSDALDARRTLDREWQARTRL---AEASTTGLRLAEARYIQGL 423 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD +R+ + LS Q S V L+ A+G ++ Sbjct: 424 DGYMRFLDSQRSNFFDRISLSDVSTQYQISLVRLFRAVGGSWD 466 >gi|170734961|ref|YP_001774075.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169820999|gb|ACA95580.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 475 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 111/478 (23%), Positives = 198/478 (41%), Gaps = 46/478 (9%) Query: 5 RAIFSLFIV-LLAGCTVGPEYTKPHMPLLPTQFSI----------GNSKNLINIDTLKWW 53 R + +L +LAGCT+ P Y +P P+ T ++ + D L W Sbjct: 3 RTLIALVCAGVLAGCTLDPTYQRPAAPVDNTWSTVPPLAQPKAAQSTAAAPPGAD-LGWR 61 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN 111 + F D L KL+++AL N + A + + RA++ P+ + S++ + Sbjct: 62 DFFKDPRLQKLIELALANNRDMRVAALNVAQYEAQYRIARANVGPAINASGSVTRERVAG 121 Query: 112 LKTNSTGQLD----SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + + + W+ID FG+ R+ +E LA D+A I ++I+ + Sbjct: 122 STSAYSSSSASVGLTSWEIDFFGRLRSLKRQALEQYLAT-DAARTSTQI---SLIATVAT 177 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+ + + I +D + +L+ G+ S + + E + S S + + Sbjct: 178 DYLQLLSDETSLQITQNTVDADQHTYDLTVNMMKMGSASLQDVRQAENSLASARSSLASY 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + +N+ +G P + L Q S N + I G+P+DL+ RPDI E Sbjct: 238 TRAVAQDRNNLVAEIGAPLPDDLP--QGPSLMESENTFADIGEGVPSDLLARRPDIVEAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A IG A++ +P + L S T + F W+F P L +P+FD G Sbjct: 296 HTLKAANANIGAARAAFFPKIELTASAGTTSGSLSSLFKAGTGAWTFAPTLSVPLFDFGY 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVEL 392 ++ + A+ +++ + A KEV NAL T + D+ V Q +L Sbjct: 356 NRATLDVAKVEKDIDIANYEKAIQTAFKEVSNALAGRTTYVTQVAADRDYVNSAQQYYDL 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR G S L +LD +R + L + + LY +G G+ Sbjct: 416 AQA-------RYRSGTDSFLTLLDAQRTLYAAQQQLVTDMLAKQSNLITLYKVLGGGW 466 >gi|194291700|ref|YP_002007607.1| rnd efflux system, outer membrane lipoprotein, nodt related [Cupriavidus taiwanensis LMG 19424] gi|193225604|emb|CAQ71550.1| RND efflux system, outer membrane lipoprotein, NodT related [Cupriavidus taiwanensis LMG 19424] Length = 507 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 106/473 (22%), Positives = 208/473 (43%), Gaps = 47/473 (9%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTL---------KWWESFNDTSLNKLVK 66 GC++ P Y P +P + + T +WW+ F D L++L+ Sbjct: 23 GCSLAPTYKVPETATVPAFKEAEAAQAEGAQWKTATPAEGQHRGEWWKIFGDAELDRLMA 82 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPN-----L 112 A + N + A R+ A+ + ADL+P S S + + +P+ Sbjct: 83 AAGESNQDLAIAAARLKQARAFTGATEADLYPQLSVGLDPTRSQPSAASQGLPDGTRVPP 142 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDI---AKLNVISKLIPSYIDAR 168 +T + + +++DLFG+ + SS+ A A D+ +L + + + +Y R Sbjct: 143 QTVLKARAFASYELDLFGR---VASSVNAARAEGEAAEDLYRSVQLALQADVAQAYFALR 199 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + L + + L ++ G T+ L + EAE+ + +D+ +E+ Sbjct: 200 TLDSERDLLNATIRLRQDALTLLKKRYDAGETTDLDPARAEAELGTARADLAGIERRRAN 259 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLA 286 H ++ L G P F S +P P+ + G+P++L+ RPDI E+++A Sbjct: 260 QEHALAVLTGVPPAAF-------SLPARPFDAAPVAVPAGLPSELLERRPDIAAAERQMA 312 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP----KLYLPIFDKGK 339 + A+IG+AK+ +P ++L G N F + W GP + +FD G+ Sbjct: 313 AANARIGVAKAAFFPRITLTGLFGFESADLSNLFKWSSRTWMLGPLIGSSIAQTVFDGGR 372 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +N+ A ++ +E ++++TVL A +EVE++L + + L A+ +++ + Sbjct: 373 NSANLAGARAAHEEAVASYRQTVLVAFREVEDSLADVRWLSQQAGALDSALGGARRAARI 432 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y G L ++D +R + + + + A + V L +G G+ P Sbjct: 433 SRSRYDAGAVDYLTVIDADRTVLQSQREANQVAGLRAAATVSLVRRLGGGWGP 485 >gi|294013408|ref|YP_003546868.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292676738|dbj|BAI98256.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 457 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 106/449 (23%), Positives = 206/449 (45%), Gaps = 21/449 (4%) Query: 21 GPEYTKPH-----MPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIAL----- 69 GP+Y P P + F N + WW ++D L+ LV+ AL Sbjct: 12 GPDYRPPEKSAATAPAVQGAFLSAQDARFSNAELPDHWWRLYDDPRLDALVEQALAANTD 71 Query: 70 ----QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 NL+ QA R A + + + + S + +P + G L + + Sbjct: 72 LRVADANLSAAQAVLREAEAGRTVGTTVSGGATLARPSGTAESLPGVVGYDLG-LSASYP 130 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL G+ RR IE+S A++++ A D ++ V + +Y +++ +++ L Sbjct: 131 LDLNGRIRRAIEASAADVEAVAAARDYVRVGVAAATARAYAQVCAANYSLAVNRRVVALQ 190 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ + + F G + + + +A + + E+ +P + ++ ++TLLG ++ Sbjct: 191 RETLNATQRLFKGGRGTAFDVSRAQAAVDASEAGLPAFAAQRQGGLYLLATLLGRAPADY 250 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 ++ + P L+ + +G A LIR RPDIR E+ +A A++G+A +DLYP + Sbjct: 251 PKDVEDCAT--LPMLHAALPVGDGAALIRRRPDIRQAERGIAADTARVGVATADLYPQIG 308 Query: 305 LNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 + GS+ L+ G T + S GP L ++ +++ I +A++ Q + V Sbjct: 309 IGGSLGLSGPLRSAGSGTSFGMSLGPLLSWSFPNRPVVRARIAQADAQVQADLARFDGIV 368 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L+A+++ E AL S L A + S + + +R GR L +LD +R+ A Sbjct: 369 LDALRQTETALESYRRHADQTAALDRARDSAGISAAQAGKLFRFGRGDFLSLLDAQRSLA 428 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E + A+ QL + + +++A+G G++ Sbjct: 429 NAEASAAAARVQLVQDQIAIFLALGGGWS 457 >gi|120613293|ref|YP_972971.1| RND efflux system outer membrane lipoprotein [Acidovorax citrulli AAC00-1] gi|120591757|gb|ABM35197.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax citrulli AAC00-1] Length = 480 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 106/473 (22%), Positives = 189/473 (39%), Gaps = 44/473 (9%) Query: 5 RAIFSLFIVLLAGC--TVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFN 57 R + + + LAGC T P P LP Q + D +WWE Sbjct: 11 RLLGAAVLFALAGCAATAPPPRVDAPAPAGWQAPLPHQGRV--------EDIARWWERLG 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-----SHRFIPNL 112 D L L+ A + + QA R+ A+ ++ R+ L P A + + L Sbjct: 63 DPLLTDLIAAAQDVSPDVAQARSRVEQARATQMAARSALLPGVDAQGNASRGTSQQAAGL 122 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T G + + W++D+FG + L A A+ A+++V +++ Y R Sbjct: 123 ATTVQGVVQASWEVDVFGGNAAAAEAARQRLAGAQARWHEARVSVAAEVATQYDAWRQCL 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV---------KLEAEIKSIESDIPTL 222 +A ++ L+ G T+ +L ++ AE + + DI Sbjct: 183 RLADVAQSDARSRSESARLTEASERAGFTAPATLALAQASGAEGRVRAEQQRMACDI--- 239 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + L G P E + +PA ++ RPD+ E Sbjct: 240 ------DLKGLVALTGLPEPELRARAAAAPAPQALPDSLFAIDTLPARVLAQRPDVYAAE 293 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGP-KLYLPIFDKG 338 +++A + A +G A++ +P L+L GS+ ++ NT WS GP + LPIFD G Sbjct: 294 REVAAASADVGNARAQRFPRLTLAGSVGRAWGSTGGTSVATNT-WSIGPVGVSLPIFDAG 352 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + + A++ QE ++ V A+ EVE AL + + A ++ S Sbjct: 353 RRAAQVDAAKARYQEAAQLYRANVRRAVSEVEQALVRLASTAARSADAERAAAGYRASFV 412 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +R G SLL++ + R E L +++ +++ LY A G G+ Sbjct: 413 ATEARWRSGLASLLELEETRRTALNSETALISLRQERMAAWIGLYRAAGGGWE 465 >gi|34557765|ref|NP_907580.1| outer membrane protein [Wolinella succinogenes DSM 1740] gi|34483482|emb|CAE10480.1| PROBABLE OUTER MEMBRANE PROTEIN [Wolinella succinogenes] Length = 463 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 110/437 (25%), Positives = 208/437 (47%), Gaps = 34/437 (7%) Query: 4 LRAIFSLFIVLL--AGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFNDT 59 +R I S V + AGC E KP +LP+Q+ SIG L I L WW F Sbjct: 5 IRLIVSGLCVAIMGAGCASRGEPIKPEEVVLPSQYERSIGA---LEGISPL-WWSHFGSR 60 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRF 108 L +L++ AL + +L A E+I A+ ++ A LFPS S S +F Sbjct: 61 ELERLIEEALALSPDLLSAAEKIEQAELSLKVAGASLFPSLGLLGSSGEKASAPKGSSQF 120 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + S+ L +++DL+G+ R ++ A L + KL++I+ + Y Sbjct: 121 --DSSHASSASLSLSYELDLWGKIRASKRAAEATLKVNRYDYETIKLSLIAGVAEGYFRY 178 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +ER+ +A + L + ++ +++ ++ QGA S L + + + S ++ + +LE R Sbjct: 179 IATQERLELARENLAIAERLLKIVQERYRQGAVSALDVSSQTSTLLSQKASLKSLELEER 238 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ L G F + P + G+P+D++R RPD+ ++ Sbjct: 239 QYWSALAILTGQAPQGFALAGARLERVLIPR----VEAGVPSDILRARPDVASALAQIEA 294 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A + +A + L+P+ SL G+ + ++ S + S + + D GK++ + Sbjct: 295 NEALVDVAYASLFPTFSLTGAGGVASESLLSLADPTSTLSLSLGVTQNLLDGGKLRYALL 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSI---NEDKKIVTKLQHAVELHKKSMSLSMI 402 +S A+ ++++T+L A+KEVE+AL ++ E +KI +L + K+S+ L+ I Sbjct: 355 AEQSKARVALESYKKTILVALKEVEDALNAVYYGAEREKIQEEL---IAQSKRSLGLAEI 411 Query: 403 NYRQGRYSLLDILDIER 419 Y++G + +LD ++ Sbjct: 412 RYKEGLIDVSVLLDSQK 428 >gi|160884885|ref|ZP_02065888.1| hypothetical protein BACOVA_02875 [Bacteroides ovatus ATCC 8483] gi|156109920|gb|EDO11665.1| hypothetical protein BACOVA_02875 [Bacteroides ovatus ATCC 8483] Length = 458 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 213/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 19 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T Q + + W++ Sbjct: 76 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQAYSLPVTASWEL 134 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 135 DVFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ ++ ++EA ++ I L++ ++++ LL P Sbjct: 192 AWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSILDLQQQISQVENSLALLLAETPR 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 252 NYERGILAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 305 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 306 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 364 Query: 358 WQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G + Sbjct: 365 FQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 417 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 418 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 456 >gi|120610051|ref|YP_969729.1| RND efflux system outer membrane lipoprotein [Acidovorax citrulli AAC00-1] gi|120588515|gb|ABM31955.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax citrulli AAC00-1] Length = 500 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 100/418 (23%), Positives = 186/418 (44%), Gaps = 28/418 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW F D L+ LV+ A N ++ +A R+ A+ + S A P + A ++ + Sbjct: 66 WWLGFRDPVLDDLVQRAGSGNTSVQEAAARLAEARALLRSADASRAPQLGASAGVARQAG 125 Query: 110 PNLKTN-------STGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKL 160 N T +T L+ +++DLFG R S A LD S A + +L + Sbjct: 126 ANTATGGPVPATLATAGLNVSYELDLFG-RLSQASEAARLDARSREALLQSTRLMAQADT 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ R + ++ + L Y+ + L+ ++ G ++L + +++AE+ + ESD Sbjct: 185 AQAYLQLRSVQAEQALVQEGLAAYRDTLRLTERRYRAGDVAELDVARVQAEVAATESDAL 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIGIPADLIRNRP 276 LE+ + H ++ L+G AT F P +P I G+P ++ RP Sbjct: 245 ALERQQAVLTHALALLVGEVATGF---------TVPPAAGEAALPVIPAGVPGTVLARRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 D+ + + + A++G+A++ +P+++L G+ + F W G L LP Sbjct: 296 DVSAAQAAVLAAQARVGVAQAAWFPAVTLTGNGGYASPELGDLFKWSARSWGIGALLSLP 355 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+ ++ A + + + VL A +EVE+ L+++ AV+ Sbjct: 356 LFDGGQRQAQEDGARARLEGALAAHRGQVLTAFREVEDQLSALRLLAGQAEAQGRAVQSA 415 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS YR G S L++LD R+ + + + V L A+G G+ Sbjct: 416 ARATQLSDSRYRNGMVSQLELLDARRSELRNRRQALQVRTAQYTATVGLIRALGGGWG 473 >gi|119357057|ref|YP_911701.1| RND efflux system outer membrane lipoprotein [Chlorobium phaeobacteroides DSM 266] gi|119354406|gb|ABL65277.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeobacteroides DSM 266] Length = 478 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 205/468 (43%), Gaps = 45/468 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFS------------IGNSKNLINID---TLKWWESFNDTSL 61 GC+ GP++ +P P T+++ IG + I + + WWE+FN L Sbjct: 17 GCSAGPDFVRPEAPK-STRYTSTEVASRIDAEHIGREEAQIVVQGEVSDSWWEAFNAPKL 75 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASISHRFIPNLKTNSTGQ 119 N L+ AL +N T+ A + A E + + L+P A +S + + TGQ Sbjct: 76 NGLIAEALIKNPTLESAAAMLRQA-EYLYKAKGGSTLYPRIDA-VSGARREGINGSMTGQ 133 Query: 120 LDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 S +LF G RR +ES A Q+ A+L + + + + I Sbjct: 134 EGSQKTFNLFNASLVAGYTFDLSGGNRRQLESLAAKAGYQRFQLAGARLMLAADIASTAI 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +I+ +IL ++ ++++ + GA+S + ++A + + +P L + Sbjct: 194 RQAELSGQIAAMEKILAARRQQLQITRERQRLGASSGAEVFAMQAVAEQARAVLPGLRQQ 253 Query: 226 FRMNVHNISTLLGYPA--TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H ++ G E ++ + +F +P+ + P+ L+R RPDI+ E Sbjct: 254 LAETRHLLAIFAGQSPDRGEIPSFLLQ---DFTLPRTLPLRV--PSSLVRVRPDIQASEA 308 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + A G A + +P ++L GS ALT + F G + W +L P+F++G Sbjct: 309 LMKAANADYGAAIAKSFPQITLGVDIGSTALTLASLFGGGSLVWGVAGQLVQPLFNRG-T 367 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + A++ ++++VL +KEV + LT++ D + ++ + A E + + + Sbjct: 368 GAEQDAAKAGFDAAAANYRQSVLKGLKEVADVLTALENDAQTLSACRDADEAIQAELRIM 427 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 YR G S L++L + + ++L A+ + V Y A+G Sbjct: 428 ESRYRLGSASFLEMLQAQDEAEQYRIELIKAESRRLSDTVAFYQAMGG 475 >gi|330002911|ref|ZP_08304461.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3] gi|328537148|gb|EGF63420.1| Cation efflux system protein CusC [Klebsiella sp. MS 92-3] Length = 461 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 209/456 (45%), Gaps = 25/456 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + W F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPIAPV-PQQFSLSQNKLVTATAGYQETGWRTFFVDPQVKSLIST 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD +P S + LK ++T L+ Sbjct: 71 ALTNNRDLRMATLKVQEARAQYRVTDADRYPQLNGDGSTTYGGKLKGDTTTSSDYAAGLN 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 131 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVANDT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 191 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ + + + + ++ RPDI E L + A IG A++ + Sbjct: 249 --SYQHLPDDSASSAVDLQGVTLPPSLSSAILLQRPDILEAEHSLQAANANIGAARAAFF 306 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS++L S++ + +N W+F PK+ LPIF+ G+ ++++ AE Q+Q + Sbjct: 307 PSITLTSSLSGSSSELSSLFNAGGAMWNFIPKIELPIFNAGRNQASLDLAEIRQQQQVVN 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A KEV +AL + Q + ++ + YR G S +++L Sbjct: 367 YEQKIQSAFKEVADALALRQSLADQIAAQQRYLASLNITLQRATALYRHGAVSYIEVLSA 426 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 427 QRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|296282780|ref|ZP_06860778.1| RND efflux system outer membrane lipoprotein [Citromicrobium bathyomarinum JL354] Length = 428 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/411 (25%), Positives = 190/411 (46%), Gaps = 22/411 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WWESF D L++LV+ A N + A R++ A+ + R L PS + R Sbjct: 24 RWWESFGDPQLSRLVEQARINNPDVRIAAARVDEARATEQASRGYLLPSLGVGVEGGVQR 83 Query: 108 FI-----PNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLI 161 + P + + +++DLFG+ ++++ A + ++ A + A+L V + Sbjct: 84 DVSALGRPQESVAAQPTFRASYELDLFGKNAARVDAAEAGVAASAAAEEAARLAVSAATA 143 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 YI R+++ L ++ ++ + + G TS+L L + EAE ++ +P Sbjct: 144 TGYITLLALDARLAVLEDTLAARQEALKFARDRAEVGYTSQLPLRQAEAEYQATAQLVPQ 203 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRY 280 L+ + +S L G E +++ L P +P++L+R RPDI Sbjct: 204 LKAQIARQENALSVLTG----ELPGGIER--GGTLDELVAPAPPATLPSELLRRRPDIAA 257 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 E ++A + AK+ +A++D PS+ L S L + + WS G + PIF G++ Sbjct: 258 AEYRIAAADAKMRVARADFMPSIDLGASAGLALSDLLADPISVWSLGGSILAPIFQGGRL 317 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENA---LTSINEDKKIVTKLQHAVELHKKSM 397 ++ + A + + ++ TVL A +EVE+ L ++ E + + Q AV ++ Sbjct: 318 QAQLDGATAQRDQAAWAYRSTVLGAFREVEDRMAILANLGEQQTALEAQQSAV---ADAL 374 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + YR G ++ +D +RA VE+ L AK + V LY A+G Sbjct: 375 RHARNRYRAGYTPYIEQVDAQRALLGVELSLVQAKADELTTLVGLYQAVGG 425 >gi|293369311|ref|ZP_06615898.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|292635641|gb|EFF54146.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] Length = 454 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 213/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 15 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 71 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T Q + + W++ Sbjct: 72 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTASWEL 130 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 131 DVFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 187 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 188 AWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETPR 247 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 248 NYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 301 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 302 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 360 Query: 358 WQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G + Sbjct: 361 FQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 413 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 414 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 452 >gi|326402264|ref|YP_004282345.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] gi|325049125|dbj|BAJ79463.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] Length = 507 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/477 (21%), Positives = 199/477 (41%), Gaps = 42/477 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLL-------------PTQFSIGNSKNLINIDTL--KWWE 54 L LLAGC VGP Y +P P L T + G +++L+ + +WW Sbjct: 19 LGTTLLAGCAVGPNYHQPAAPKLHSYTTSRLPNSTASTSGAGGTAQHLVIGQKIAGEWWT 78 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLK 113 ++ L+ L++ AL N ++ A + AA++ + FPS S + R L Sbjct: 79 LYHSKPLDALIRKALGNNPSLESAQYTLLAARDTARAAEGGFFPSISGSFQAERVRSGLG 138 Query: 114 TNSTGQLDSD-------------WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 T S G + + D+FG RR +ES A + ++ L++ + Sbjct: 139 TTSLGSAGAGLTYSLRNASVAVSYAPDVFGGTRRQVESLHAQAEQQRFALEATYLSLTAN 198 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + + +I +I+ K +++ + G + + + ++ E+ + Sbjct: 199 IVTASVTEASLTAQIEATERIIRAEKGLLDILDRQVALGGIPETNAITQRTQLAQTEATL 258 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRNRP 276 P L K ++ G P + F + +F +L +P + + +P+ L+R RP Sbjct: 259 PPLRKQLAQTRDQLAAYEGVPPSRF------HAADFTLADLALPESLPVSLPSALVRQRP 312 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLP 333 DIR L A++G+A +++ P ++L+ I AL F W+ + P Sbjct: 313 DIREAAAVLHQDTAQVGVATANMLPQITLSAGIGHEALDGQALFAPQTLLWNLAAGITQP 372 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 F+ G + R A ++ + T++ TV+ A + V +AL +++ D + A Sbjct: 373 FFEGGTLFYKRRAAVATMKAAAETYENTVVLAFQNVADALEALHYDAIALAADTAAEHDA 432 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S++L +R G +L E+ + A Q L+ A+G G+ Sbjct: 433 QRSLNLIERQFRLGGVPYTSVLTAEQTYESAVITRIKATAQRYADTAALFQALGGGW 489 >gi|325104157|ref|YP_004273811.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Pedobacter saltans DSM 12145] gi|324973005|gb|ADY51989.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Pedobacter saltans DSM 12145] Length = 1512 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 103/473 (21%), Positives = 223/473 (47%), Gaps = 38/473 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L ++LL C+V + + ++P F + ++ + W + F D +L L+ L Sbjct: 1045 LVLLLLGACSVKNDVKEYRHQVIPQNFE-KELTDTASVAAISWKDLFRDKNLIALIDTTL 1103 Query: 70 QQNLTILQATERINAAKENI----------LSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 N + QA RI AK + L++ AD S Y + I N TN + Sbjct: 1104 ANNKDLKQALYRIEQAKAKLRLKKNATLPNLNIVADAGLSKYGFYTMDGIGNYDTNFSDN 1163 Query: 120 LDSD-----------------WKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L +D W+ID++G+ ++ +++ N L S Q + + ++S++ Sbjct: 1164 LKADEKLPDPLPNYFLGLQTSWEIDIWGKLKNQKAAALNEFLASNEGQ-KLIQTELVSQV 1222 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y++ + + + + ++ +DL +K++E+ +K G +L + + A + + ++ Sbjct: 1223 ASAYLELQSLDDELKVYNRNIDLQQKSLEVIEVKKEAGRADELGVQQFRAILFNSKAKKE 1282 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++IS L G +F + +++ Q L+ I +G+P L+ NRPD+R Sbjct: 1283 EVLQQMQFLQNHISLLAG----KFDNGVKRTEAILQEELFEKIKVGLPTQLVANRPDVRQ 1338 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDK 337 L SV + AK P+++L+ I L ++ +N+ W + P+F++ Sbjct: 1339 ALLNLKASVHDVKAAKLAFLPTIALSPYIGLQAFDAEKFFNSKSLTWGLLGGITAPVFNQ 1398 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 I+S+ ++S + +++TVL A EV+N +++ +K + + + S+ Sbjct: 1399 RVIRSDYEYFKASYGLAFEEYEKTVLQAFTEVKNGISADEYIRKRKDYILEEAKALRASV 1458 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + + GR + LD+L+ +++ E++ +++L + + LY A+G G+ Sbjct: 1459 SAAQDLFIAGRITYLDVLNAQKSVIDAEINRISIRKELLLNQIILYKALGGGW 1511 >gi|160895574|ref|YP_001561156.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160361158|gb|ABX32771.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 594 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 176/355 (49%), Gaps = 26/355 (7%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D WW+++ D SLN LV+ AL NL + QA R+ ++ +L+ A + R Sbjct: 163 DLQGWWKAWGDESLNTLVEEALAANLDLSQAQSRLR--QQRLLAGTAGSAFRPVFTAGAR 220 Query: 108 FIPNLKTNST---GQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPS 163 + ++ + +D W + LFG R E ++ A++ A ++ A++ +++ ++ Sbjct: 221 TLQDIAAIDSYFHASIDVSWDLGLFGAREAGERNAAASVLDARGRLQAARVALVADVVHR 280 Query: 164 YIDARHF-KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y+D R ++R I Q L L + ++L+ ++ Q + ++ +L+ + + +L Sbjct: 281 YLDIRMAQRQRALIDEQAL-LDARALQLAQVRQQQRLGTAEAVHQLQLQAGQSAALRASL 339 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + H ++ LLG + ++Q + P +PADL+R RPDI+ + Sbjct: 340 RETQARSAHMLAALLGRTRPD-AQWLQADAKAPLPGAQALGVAALPADLLRTRPDIQVAQ 398 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI----------ALTHDNSFPGYNTHWSFGPKLYL 332 + + A+ GIA + LYP L GS+ T DN+ +FGP++ + Sbjct: 399 AAVERAAAEQGIAHAALYPRFVLGGSLLYSFNITQNYRTTQDNAP-------TFGPQIDI 451 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+FD G+ +S +E + Q ++++VL+ + EVE+AL +++ ++ + LQ Sbjct: 452 PLFDWGRRRSQADASELALQAAVQAYRQSVLDGVAEVESALAALDAQRERIASLQ 506 >gi|90411794|ref|ZP_01219803.1| outer membrane efflux protein [Photobacterium profundum 3TCK] gi|90327356|gb|EAS43720.1| outer membrane efflux protein [Photobacterium profundum 3TCK] Length = 479 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 212/460 (46%), Gaps = 34/460 (7%) Query: 15 LAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------WWESFNDTSLNKLVKI 67 L GC + P+Y +P P+ T + + SK +NI + W + ++ ++V + Sbjct: 15 LGGCASFIPDYERPIAPV-ETLWPVDESK--MNITGAQVSPYSDWRQFVQSNNIQQVVNL 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT-NSTGQLD-- 121 AL N + A I A+ R+ LFP+ S + + R N+ NST +D Sbjct: 72 ALTNNRDVRIAVLNILKAEAQYGIQRSQLFPNIDLSAGASNQRLSENVNGGNST--IDRQ 129 Query: 122 -------SDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + ++ID +GQ +E +L S +L +IS +I +Y++ K Sbjct: 130 YSVNLGITSYEIDFWGQISSLEKQALEQYLSTIEGRRNTQLTLISSVIEAYLNLTTTKSL 189 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A + L + ++ L+ F G +S L + + + + + D+ +N++ + Sbjct: 190 LQLAKETLVSQQSSLTLTQKSFQNGVSSGLDVAQAKTTVATALKDVALFTSQVNVNINAL 249 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G P + H + + + N P+ +G+P+ ++ RPDI E L + A IG Sbjct: 250 NVLVGSPVPD--HLLPRTGD---LNTLSPVAVGLPSQVLLQRPDIIAAEHSLIAANANIG 304 Query: 294 IAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +P++SL G ++ D+ F G + W F P L LPIF+ G++ S + A + Sbjct: 305 AARAAYFPTISLTATGGILSSAADDLFSGDSRSWVFSPALSLPIFNWGELDSQLDVAIAD 364 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 Q +++T+ A +EV +AL + ++ Q V+ S LS + + +G Sbjct: 365 QQIALNQYEKTIQTAFQEVADALANQATLDDQLSAQQMLVDASGDSFRLSNLRFNEGVDD 424 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD +R+ + DL K + + LY +G G+ Sbjct: 425 YFTVLDSQRSYYTAQQDLITTKLSKQLNLLTLYKVLGGGW 464 >gi|254248911|ref|ZP_04942231.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124875412|gb|EAY65402.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 480 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 195/414 (47%), Gaps = 26/414 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP- 110 F+D L++L+ L NL + ATER+ A+ + RA L P +++A+ + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAATERVKQAQALTVQKRAVLLPELDATAHAADARQNTPP 116 Query: 111 --NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGAGLALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVDL 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 177 RWAQQELKILQGNAKIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQIS 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ I+ G + Q+ P I +P+ + RPD+ ++ Sbjct: 237 HQLNLIAVYSGRTPESVDRLVLAQAGEI-PAPPIGAPGTLPSQALLRRPDVLTAYAQVER 295 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDK 337 A++G+AK++ YP SLN G +A ++ DN F + S PIF+ Sbjct: 296 RAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIFNA 348 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K++ Sbjct: 349 GRITADISQSESRMRESELGLRQTMLQALREVEDARANLVSSDETTRRLDSALAASDKAL 408 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 409 GLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|167579266|ref|ZP_02372140.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily [Burkholderia thailandensis TXDOH] Length = 507 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 209/458 (45%), Gaps = 33/458 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN LV Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKVAQPAD--RADRGPWWSIYDDPQLNALVDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIPNLKTNST 117 N T+ Q A+ + RA FP+ +S + R I N T + Sbjct: 85 SNQTVAQYAAAYRQARALVAQARASYFPTLGLTASESRASSALSSSTTTRTIGN--TYNV 142 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R + Sbjct: 143 G-LDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQKL 201 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+TL Sbjct: 202 LDDTVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQAAAIDNGIARAQYEHAIATL 261 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 262 VGEPASTF--SLPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVAI 316 Query: 297 SDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P+L+L+ S F WS GP+L +FD G + A ++ + Sbjct: 317 AAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYDQ 376 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 ++ VL+A ++VE+ L S ++ + + AVE + ++ +++ Y+ G + L+ Sbjct: 377 DVAAYRAAVLSAFQDVEDNLASQRILEQEIAVQRQAVESARHALDITLNQYKAGTVAYLN 436 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + + LS Q S V L A+G G++ Sbjct: 437 VLTAQTTAFSAQQKLSTISGQRMVSSVGLVKALGGGWD 474 >gi|298377464|ref|ZP_06987416.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_19] gi|298265483|gb|EFI07144.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_19] Length = 463 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 190/421 (45%), Gaps = 21/421 (4%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS- 99 S + N+ L W E F D L L++ L N+ + A R+ AK + S R PS Sbjct: 50 SADTTNMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAVLRVEEAKVLLTSARLSFLPSI 109 Query: 100 ---SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 +I+ T + W++DLFG + + +S ++Y Q ++ V Sbjct: 110 NLAPQGTITKMESSGYVKAYTAPAAASWEVDLFG--KLLNASRGQ-KASYLQSQYSRQAV 166 Query: 157 ISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 S+LI +Y ++ I + +D+YK+N+ + G ++ ++ ++ A Sbjct: 167 RSQLIGGIANTYYTLLMLDRQVEITAKTVDIYKENVRVMEAMKMAGMATEAAVTQMRAAY 226 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + LE R +++S LL + ++ P I +G+P L+ Sbjct: 227 HQVSGSLIELESQVRSVENSLSVLLAKAPQQIDRGTLEE--QVMPE---DIMVGVPLQLL 281 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGP 328 NRPD++ E LA + A++ YP L++ + T+ + PG + Sbjct: 282 ENRPDVKIAEMTLASAYYTTNKARAAFYPGLNITATAGWTNGSGISVANPGQFMFQALA- 340 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF+ GK+ +N++ +++ + + +Q+T+L A KEV +AL + K + + + Sbjct: 341 SLAQPIFNNGKLVANLKVSKAEEKIAQMNYQQTILEAGKEVSDALHQYDATSKKLVQDRA 400 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E +K+++ + ++ + + L+IL +++ ++ Q ++ V LY AIG Sbjct: 401 QIEQLEKAVAYTSALFQSAQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVVSLYSAIGG 460 Query: 449 G 449 G Sbjct: 461 G 461 >gi|83644076|ref|YP_432511.1| outer membrane protein [Hahella chejuensis KCTC 2396] gi|83632119|gb|ABC28086.1| Outer membrane protein [Hahella chejuensis KCTC 2396] Length = 478 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 106/451 (23%), Positives = 199/451 (44%), Gaps = 28/451 (6%) Query: 17 GCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC +Y +P + L P +S + + +WW +F D LN L++ ALQ N Sbjct: 36 GCEGLARSQYVQPQLEL-PASWSYAPVSGEQALASEQWWRAFQDEELNSLIERALQSNSD 94 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKIDLF 129 + A ++ A+ +L P A S N+ +++ + L ++IDL+ Sbjct: 95 MALAALKVRQARLRAGIADGNLTPDVSAQFSASRERNIDAHTSSKSFGSSLGLSYEIDLW 154 Query: 130 GQ------RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 G+ H E+ + A A L +I Y + E I+ + L+ Sbjct: 155 GKLSSARDTAHWEAMATEQERAGA-----ALTLIGTTANLYWRLAYLNESIAASEASLEY 209 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 K +EL+ +K GA S L L++ E + S + + TL + + ++ L P Sbjct: 210 TAKALELAQVKHRSGAVSNLDLIQAEQNLASQRASLTTLRQDKVEAQNALAILFDQPPEN 269 Query: 244 FLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + Q P + +P+ + PA L+ RPD++ E +L ++A +++ YPS Sbjct: 270 AVPAPQSL-----PTMAMPVLPLATPAALLARRPDMQAAEMRLRSALADTDHSRASYYPS 324 Query: 303 LSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL GS+A T + N S G L LP + + NI+ +E++ + I +++ Sbjct: 325 FSLTGSLA-TGGSELADILRNPVASLGAGLSLPFIQWRQTQLNIQVSEAAYELAVIEFRQ 383 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 + +A+ EVEN L++ + L+ + L ++ L+ + YR G + LD + Sbjct: 384 KLYSALAEVENKLSARTQLMAQEDALRTSFALASEAERLAEVRYRSGATGVQAWLDQQET 443 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ + ++ + LY A+G G++ Sbjct: 444 RRSAQLQLTANRLAQLQNMMALYQALGGGFS 474 >gi|167834857|ref|ZP_02461740.1| outer membrane efflux lipoprotein [Burkholderia thailandensis MSMB43] Length = 492 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 107/464 (23%), Positives = 210/464 (45%), Gaps = 41/464 (8%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKVAQPAD--RADRGPWWSVYDDPQLNGLIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTIGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES---DIPTLEKSFRMNVHN 232 + + Y+K+++L+ ++ QG ++ +++ + +++S ++ D + + H Sbjct: 205 LLDDTVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQAAAIDNGIVRAQYE---HA 261 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TL+G PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +I Sbjct: 262 IATLVGEPASTFA--LPPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQI 316 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A + +P+L+L+ S F WS GP+L +FD G + A + Sbjct: 317 GVAIAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARA 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + ++ VL+A ++VE+ L S I E + +V + AVE + ++ +++ Y+ G Sbjct: 377 TYDQDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHALDITLNQYKAG 434 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + L+ Q S V L A+G G++ Sbjct: 435 TVGYLNVLTAQTTAFSARQKLTTIIGQRMVSSVGLVKALGGGWD 478 >gi|260549060|ref|ZP_05823281.1| outer membrane protein [Acinetobacter sp. RUH2624] gi|260407788|gb|EEX01260.1| outer membrane protein [Acinetobacter sp. RUH2624] Length = 496 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 107/406 (26%), Positives = 186/406 (45%), Gaps = 13/406 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRF 108 +WW F D LN+LV L++N L + T + K ++ + + L SS S H F Sbjct: 86 RWWTLFGDAQLNQLVNNVLERNSDLAVAGITLKQARLKADLTANQQGLRTSSNVSTGHTF 145 Query: 109 IPNLKTNSTGQLD----SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N +S L +++DLFG+ R E+S + + ++I+ Sbjct: 146 DLNSGDDSAKGLSLSAGVSYELDLFGKLARQTEASKWEALATEQDLQSTGQSLIATTAKL 205 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + ER + A Q L +K +L ++ GA S L L + E ++S ++ + +E Sbjct: 206 YWQLGYLNERYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIE 265 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 + I+ LL P + + Q P +P I G+PAD++ RPD++ E Sbjct: 266 QQLVETRTAIAVLLHEP----VQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAE 321 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIK 341 +L ++A K+ YPS+SL S+ + + N + G L LP +K Sbjct: 322 LRLRKALATKDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMK 381 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +I + ++ I +++T+ A +VENAL+S E K V + ++L +K+ L+ Sbjct: 382 KDIAISNLDYEKAIIQYRQTLYQAFADVENALSSRTELDKQVELQERNLQLAEKTERLTE 441 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + YR G +L +LD ++ T + L K+ +YV L A+G Sbjct: 442 VRYRYGAVALKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALG 487 >gi|317478128|ref|ZP_07937303.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] gi|316905726|gb|EFV27505.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] Length = 468 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 194/421 (46%), Gaps = 29/421 (6%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 + + + W E F D L L+ LQ N A R+ A+ +LS + PS +A Sbjct: 59 LGLGGMDWHELFTDPHLQALIGQGLQNNTDYQSAQLRVEEAEATLLSAKLAFLPS-FALA 117 Query: 105 SHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 + + + Q + + W++D+FG+ R+ + L YAQ + V ++ Sbjct: 118 PQGTVSSFDSRKATQTYSLPVTASWELDVFGRMRNAKKQSKAL---YAQSQDYRQAVRTQ 174 Query: 160 LIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 LI +Y ++++I+ Q + +++ + + G ++ ++ ++EA + Sbjct: 175 LIAGIANTYYTLLMLDQQLAISRQTEETWRETVASTRALMNAGMANESAVSQMEATYYQV 234 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + LE+ ++++ LL A HY ++ + + +IGIP ++ R Sbjct: 235 QTSVLDLEEQINQVENSLALLL---AETPRHY--ERGVLAEQQFPVGFSIGIPVQMLSCR 289 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLY 331 PD+R E+ L + A+S YPS++L GS T+ PG + G L Sbjct: 290 PDVRSAERTLEAAFYGTNAARSAFYPSITLGGSAGWTNSAGSMIVNPGKFLASAVG-SLT 348 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED---KKIVTKLQH 388 P+F +G++ + R A + +E + +Q+T+LNA EV +ALT+ +++ K Sbjct: 349 QPLFARGQVIAQYRIARAQQEEASLAFQQTLLNAGSEVNDALTAWQTSLSKSELLDKQVA 408 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +++ +S SL M G + L++L + + ++ + + +S ++LY A+G Sbjct: 409 SLQTAARSTSLLM---EHGNTTYLEVLTVRQTLLNAQLAQTANRFSEIQSLINLYKALGG 465 Query: 449 G 449 G Sbjct: 466 G 466 >gi|328952942|ref|YP_004370276.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] gi|328453266|gb|AEB09095.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobacca acetoxidans DSM 11109] Length = 475 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 115/478 (24%), Positives = 217/478 (45%), Gaps = 44/478 (9%) Query: 3 ILRAIFS---LFIVLLAGCTVGPEYTKPHMPLLPTQFSIG-------NSKNLINIDTLKW 52 ++R I S L +LL GCT+ P Y++P P+ P + G + + ++W Sbjct: 1 MMREILSFCALTALLLTGCTMAPPYSRPEAPI-PQDWPSGPAYKDAFSKPDAALAVEVQW 59 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR----- 107 + FND L ++ +AL+ N + A + A+ RA+LFP+ IS + Sbjct: 60 RKFFNDHRLQTVIAMALKNNRDLRVAALNVEKARALYRVQRAELFPTLETGISAKKERVK 119 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVI 157 + NL+ S S W+ID FG+ +R +E LA+ + A++ +I Sbjct: 120 ISGTQGMVNLEEYSINLGISSWEIDFFGRIRSLKKRALEEYLASEQGRRS----AEILLI 175 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S++ +Y+ +E + +A L+ + L +F G +L L +++ + + Sbjct: 176 SEVANAYLTLAADRENLKLARSTLETQQAAYNLIRRRFEVGFAPELDLRQVQTRVDTARV 235 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 D+ + + + + L G P L + ++ + +P +P ++ G ++++ RP Sbjct: 236 DVARYTELTAQDENALHLLAGSPIPADL--LPRELSLVKP---LPDVSPGTSSEVLLRRP 290 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLP 333 DI E L + A IG A++ +P +SL +I + + T WS+ P++ LP Sbjct: 291 DILQAEHVLKAANANIGAARAAFFPRISLTSAIGTASGDLSGLFETGSFVWSYAPRIVLP 350 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD + + + + + + ++ ++ A +E +AL S + Q V+ Sbjct: 351 IFD-ARTRPALEATQVARKIALAQYERSIQIAFRETADALASRGTLGDRMAAQQSLVDAT 409 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 ++ LS Y +G L++LD +R+ + L IA R LAK + V LY +G G Sbjct: 410 ARTYQLSNARYEKGIDIYLNVLDAQRSLYAAQQGL-IAIR-LAKLVNQVRLYEVLGGG 465 >gi|189461797|ref|ZP_03010582.1| hypothetical protein BACCOP_02463 [Bacteroides coprocola DSM 17136] gi|189431557|gb|EDV00542.1| hypothetical protein BACCOP_02463 [Bacteroides coprocola DSM 17136] Length = 465 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 205/468 (43%), Gaps = 47/468 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +++ C + Y +P P T + ++ N+ N L W E F D Sbjct: 15 CLAAMMSSCHIYKAYDRPESIDASGIYRDPASATDTLVADTSNMGN---LPWKEVFRDAK 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-- 118 L L++ L N+ + A R+ AK + + + PS P T S G Sbjct: 72 LQALIEEGLANNVDMQAAALRVQEAKVMLTAAKLSYLPS------INLAPQGTTTSMGGG 125 Query: 119 ------QLDS--DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YID 166 QL + W+IDLFG+ I ++ AY Q A+ V S++I Y Sbjct: 126 SYVKAYQLPAVASWEIDLFGK---ILNTKRGQKVAYEQSKYAEQAVRSQIICGIANIYYS 182 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ I + +YK+N+ + G T++ + ++ A +E+ + L++ Sbjct: 183 LLMLDRQVEITTETAAIYKENVRVMEAMKVAGMTTEAGVAQMRAASHQVEASLMDLKRQV 242 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R ++++ LL P T + + +Q P + G+P L+ NRPD++ E L Sbjct: 243 RETENSLAVLLAKAPQTIDRNTLGEQ---VMPE---ELTAGVPLQLLENRPDVKMAEMTL 296 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++ YP L++ G+ T+ + PG + L PIF+ GK+ Sbjct: 297 AAAYYTTNSARAAFYPGLNITGTAGWTNGSGISVVNPGEFMLQALA-SLAQPIFNNGKLV 355 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N++ +++ + + +Q+T+L A KEV +AL + K + + + VE K+++ + Sbjct: 356 ANLKVSKAEEKIAKMNYQQTILEAGKEVSDALFLYDTQNKKLIEDRGQVEQLDKAVTYTK 415 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ G + L+IL ++ ++ Q ++ ++LY A+G G Sbjct: 416 ALFQSGEATYLEILTAQQNLLSAQLSEVSDNFQRMQAVINLYSALGGG 463 >gi|325926946|ref|ZP_08188226.1| flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF [Xanthomonas perforans 91-118] gi|325542683|gb|EGD14145.1| flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF [Xanthomonas perforans 91-118] Length = 687 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 169/339 (49%), Gaps = 13/339 (3%) Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D+ W++D FG+RR E +LA ++ A++ A++ + +++ Y++ R + R++IA Sbjct: 348 FDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAAEVGQVYLNYRGLQARLAIAD 407 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 LD +++++L + QGA S L + ++ +++ E+ LE + ++ ++G Sbjct: 408 TNLDKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQEAQRLPLEMQAQEAQDQLALMVG 467 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPDIRYQEKKLADSVAKIGIA 295 P + Q + QP +P + + LIR RPD+R E++LA S A+IG A Sbjct: 468 REPGA-----LDAQLSTPQPLPMLPTQVRVDDAGALIRRRPDVRKAERELAASSAQIGEA 522 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P +SL G ++ S +N+ P L IFD GK ++ + +A + Sbjct: 523 LNGYFPQVSLLGGLSWVA-GSPSDFNSDALTTLAVPMLRWSIFDFGKTRAQVEQARAGNA 581 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++ TVL A+++ +AL +K + + A +S L G S + Sbjct: 582 GRTAAYEGTVLAALQDANSALARFGSARKQLVVARQAEASATRSAGLMQQRRDAGATSSI 641 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 642 DLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 680 >gi|264678348|ref|YP_003278255.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262208861|gb|ACY32959.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 482 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 104/463 (22%), Positives = 203/463 (43%), Gaps = 38/463 (8%) Query: 17 GCTVGPEYTKP---HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC+V P T+ P +P +S + WW++F D L++ V++AL +N Sbjct: 21 GCSV-PSLTRAPDSAQPAVPASWSAERAAGAAGAVQTDWWQAFGDAQLSRWVELALARNN 79 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----TGQ---------- 119 +L A R+ A+ N+ D+ S+ A P S TGQ Sbjct: 80 DVLTALARVEEARANL-----DVTGSAAAPQLSLSAPGSANRSLSARTGQMVHVRSAQPV 134 Query: 120 LDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W++DL+ + + + L ++ A D +L V + + +YI R + ++++A Sbjct: 135 LQASWELDLWDRLGSLSRAADQRLQASQADRDAMRLTVAATVAQAYIALRSLQAQLAVAE 194 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + + L + G S+L + AE++S+ + L + + + L G Sbjct: 195 DTVKSREDAVRLLTDQVRVGYISQLQQSQALAELESVRQSVQQLSLALQRQRIALMQLAG 254 Query: 239 YPATEFLHYMQKQSNNFQPNL---YIPI--NIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + + + S + + L +P G+P+ L+ RPDI + LA S + + Sbjct: 255 GNGDDQAQALARSSLSVRAGLESMSLPAMPAPGLPSGLLERRPDIARAQLLLAASDSNLA 314 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 ++ P +SL+ + N+ YN WS G + P+F+ G+++ A + Sbjct: 315 AQRAAFLPQVSLSANFGSLFINALD-YNPARVWSLGGSILAPLFNGGRLQGQFDAASAQR 373 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMINYRQGR 408 + ++ V+ A +VE AL S +++ + +HA E K +++ + Y G Sbjct: 374 DQAAYAYRGVVIKAFGDVETALVS---SQQLQAQWEHAKEREKVLGRTLGFAKDRYEAGY 430 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L+ LD +R V+ ++ ++ ++ V LY A+G G+ Sbjct: 431 ASYLEELDAQRNLFAVQQEVLRLRQSQLENAVALYQALGGGWQ 473 >gi|150007040|ref|YP_001301783.1| outer membrane protein oprM [Parabacteroides distasonis ATCC 8503] gi|149935464|gb|ABR42161.1| outer membrane protein oprM precursor [Parabacteroides distasonis ATCC 8503] Length = 461 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 190/421 (45%), Gaps = 21/421 (4%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS- 99 S + N+ L W E F D L L++ L N+ + A R+ AK + S R PS Sbjct: 48 SADTTNMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAVLRVEEAKVLLTSARLSFLPSI 107 Query: 100 ---SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 +I+ T + W++DLFG + + +S ++Y Q ++ V Sbjct: 108 NLAPQGTITKMESSGYVKAYTAPAAASWEVDLFG--KLLNASRGQ-KASYLQSQYSRQAV 164 Query: 157 ISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 S+LI +Y ++ I + +D+YK+N+ + G ++ ++ ++ A Sbjct: 165 RSQLIGGIANTYYTLLMLDRQVEITAKTVDIYKENVRVMEAMKIAGMATEAAVTQMRAAY 224 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + LE R +++S LL + ++ P I +G+P L+ Sbjct: 225 HQVSGSLIELESQVRSVENSLSVLLAKAPQQIDRGTLEE--QVMPE---DIMVGVPLQLL 279 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGP 328 NRPD++ E LA + A++ YP L++ + T+ + PG + Sbjct: 280 ENRPDVKIAEMTLASAYYTTNQARAAFYPGLNITATAGWTNGSGISVANPGQFMFQALA- 338 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF+ GK+ +N++ +++ + + +Q+T+L A KEV +AL + K + + + Sbjct: 339 SLAQPIFNNGKLVANLKVSKAEEKIAQMNYQQTILEAGKEVSDALHQYDATSKKLVQDRA 398 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E +K+++ + ++ + + L+IL +++ ++ Q ++ V LY AIG Sbjct: 399 QIEQLEKAVAYTSALFQSAQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVVSLYSAIGG 458 Query: 449 G 449 G Sbjct: 459 G 459 >gi|315636647|ref|ZP_07891880.1| outer membrane efflux protein OprM [Arcobacter butzleri JV22] gi|315479073|gb|EFU69773.1| outer membrane efflux protein OprM [Arcobacter butzleri JV22] Length = 466 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 104/438 (23%), Positives = 204/438 (46%), Gaps = 25/438 (5%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF---SIGNSKNLINIDTLKWWESFN 57 MN + L +L +GCT+ P ++P F S+ NS + +++ W Sbjct: 1 MNKINISIILTTILFSGCTLAPNLEPLDSNVIPQTFKNNSVENSSDDLSLVKPNWENFVQ 60 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---- 111 D L K+V +AL+ N + A I +A+ RAD FP+ + S +H N Sbjct: 61 DERLKKVVSLALENNKDLKIALLNIESARATYRIARADNFPTFDAKGSATHSKSMNSENS 120 Query: 112 --LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + + + ++IDLFG+ R + +S+L + S + K+++IS+ I ++I Sbjct: 121 TSISHNYSANISASYEIDLFGKVRSLSQSALDSFLSTQYAANATKISLISETITAWITLA 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E++ +A + + +K EL+ ++ G S + +A + + ++ + S Sbjct: 181 IHQEQLKLATETVKNLEKVYELTQKRYLAGVVSNTDVFDAKASLNEAQINVISYSNSVEQ 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + + ++ P + L +++ L P I ++++ RPDI E L Sbjct: 241 DKNALELIVAQPLNDDLLPKNLETHTSWLMLLKP---AISSNILLARPDIMQAEYNLKSK 297 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNI 344 A IG A++ +P++SL + + + +N + WSF P + +PIF G+ +N+ Sbjct: 298 NANIGAARAAFFPTISLTANSGIASRSLSDLFNGNAQNVWSFSPNISIPIFSGGENVANL 357 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSM 401 + +++++ A KEV + L +INE + K + VE KS +S+ Sbjct: 358 DYTYAQRDIALQEYEKSIQTAFKEVNDTLVIRKTINEQ---IQKQKELVEAVSKSYEISL 414 Query: 402 INYRQGRYSLLDILDIER 419 +Y+ G S L++L +R Sbjct: 415 NSYKIGIGSFLNVLTSQR 432 >gi|319761123|ref|YP_004125060.1| rnd efflux system, outer membrane lipoprotein, nodt family [Alicycliphilus denitrificans BC] gi|330822981|ref|YP_004386284.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|317115684|gb|ADU98172.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans BC] gi|329308353|gb|AEB82768.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 473 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/425 (25%), Positives = 193/425 (45%), Gaps = 39/425 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW +F D L+ LV+ AL N + QA RI A+ S RA L P AS R+ Sbjct: 59 WWRAFGDAQLDALVQQALDGNPGLRQAAARIARAEAFTRSARAALGPQVNASADLTRQRY 118 Query: 109 -----IPNLKTNS-----TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 P + S T +L W+ID FG+ R +ES+L +A A D A+L + Sbjct: 119 SENGPYPPGQAGSILDIDTARLSGSWEIDFFGKNRAALESALGTARAARADADAARLLLA 178 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ +Y+ +E++ +A + L + + L + + G ++L L + E + Sbjct: 179 ANVVHAYLQLARLQEQLQVAERTLAQRGEVLRLVQQRVSAGLDTRLELRQSEGALPEARQ 238 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEF------LHYMQKQSNNFQPNLYIPINIGIPADL 271 I L + + + + L G P L MQ + IP + PADL Sbjct: 239 QIEALREQAALTRNALGALAGEPKAALALTPPALAAMQSAA--------IPAVL--PADL 288 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 + RPD+ ++ S + +A++ YP++SL + L N + W GP Sbjct: 289 LGRRPDVAAARWRVEASAQDVAVARAQFYPNVSLTAFVGLASMGLGNFVEAGSREWGVGP 348 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LP+FD G++++N+ + ++ +L+A+++ + L S ++ + + + Sbjct: 349 ALRLPVFDAGRLRANLAGKSADLDAAVESYNAALLDAVRDAADQLASSASVERQIAEQRQ 408 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIA 445 A E + + +++ Y G + L +L E A ++ VDL+ A+R A++ V A Sbjct: 409 AGEAAEAAYAIARKRYEAGLGNYLQVLSAETQVLAQRRLAVDLA-ARRLDAQAGV--MRA 465 Query: 446 IGSGY 450 +G GY Sbjct: 466 LGGGY 470 >gi|237716961|ref|ZP_04547442.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262405730|ref|ZP_06082280.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229442944|gb|EEO48735.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356605|gb|EEZ05695.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 458 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 213/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 19 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T Q + + W++ Sbjct: 76 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTASWEL 134 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 135 DVFGRMRNSKKQAKVL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 192 AWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETPR 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 252 NYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 305 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 306 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 364 Query: 358 WQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G + Sbjct: 365 FQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 417 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 418 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 456 >gi|116695060|ref|YP_840636.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113529559|emb|CAJ95906.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 514 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 105/470 (22%), Positives = 203/470 (43%), Gaps = 41/470 (8%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTL---------KWWESFNDTSLNKLVK 66 GC++ P Y P +P + + T WW+ F D L++L+ Sbjct: 30 GCSLAPTYKVPETATVPAFKEAEAAQAEGAQWKTATPAEGQHRGDWWKIFGDAELDRLID 89 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPN-----L 112 A N + A R+ A+ + ADL+P + S + + +P+ Sbjct: 90 AAGSSNQDLAIAAARLKQARAFTGATEADLYPQLSVGLDPTRAQPSAASQGLPDGTRVPP 149 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARH 169 +T + + +++DLFG R S A A D+ +L + + + +Y R Sbjct: 150 QTVLKARAFASYELDLFG--RVASSVNAARAEGEAAEDLYRSVQLALQADVAQAYFALRT 207 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L + + L ++ G T+ L + EAE+ + +D+ +E+ Sbjct: 208 LDSERDLLNATIKLREDALSLLKKRYDAGETTDLDPARAEAELGTARADLAGIERRRANQ 267 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H ++ L G P F + + + P I I G+P++L+ RPDI E+++A + Sbjct: 268 EHALAVLTGVPPAAF--SLPARPFDAAP---IAIPAGLPSELLERRPDIAAAERQMAAAN 322 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP----KLYLPIFDKGKIKS 342 A+IG+AK+ +P ++L G N F + W+ GP + +FD G+ + Sbjct: 323 ARIGVAKAAFFPRITLTGLFGFESADLSNLFKWSSRTWALGPLIGSTIAQTVFDGGRNSA 382 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A ++ +E +++TVL A +EVE++L + + L A+ +++ +S Sbjct: 383 NLAGARAAHEESVAGYRQTVLVAFREVEDSLADVRWLSQQAGALDGALGGARRAARISRS 442 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G L ++D +R + + + + A + V L +G G+ P Sbjct: 443 RYDAGAVDYLTVIDADRTVLQSQREANQVAGLRAAATVSLIRRLGGGWGP 492 >gi|83594258|ref|YP_428010.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] gi|83577172|gb|ABC23723.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] Length = 472 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 117/466 (25%), Positives = 216/466 (46%), Gaps = 37/466 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 S+ I+ L+ C++ P P P+ P + L D L ++V + Sbjct: 6 LSVLILTLSACSLIPPLETPKPPVPPVFPQSDGVAEGAGVAGLPLAGLVRDPRLLRIVDL 65 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLD---- 121 AL+ N + A + A+ AD P + AS S P S D Sbjct: 66 ALENNRDLRLALLNVEEARSQYGVQDADTLPGVDTQASYSRERTPGSGGRSATVADQHGM 125 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFKERI 174 + ++IDLFG+ R + S A L+ A + A+L ++ + +Y R E+ Sbjct: 126 TLGLNAFEIDLFGRVRAL--SAAALERYLASGEGYRAARLTLVGAVADAYFAERLAVEQR 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A + L +++++EL+ G + + +V+ EA++ E+D+ + E++ + + Sbjct: 184 ALAERTLADWRQSLELARDLRRSGQSGEGDMVQAEAQVALAEADLRSRERAVSQAGNALR 243 Query: 235 TLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++G PA L + QP + + G+P+DL+ NRPDIR E+ LA + Sbjct: 244 LVVGTDLPADLPAALRL--------DEQP-VTTRLPAGLPSDLLLNRPDIRQAERTLAAA 294 Query: 289 VAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +G A++ +P LSL + T F + W+ P+L LPIFD G++ + + Sbjct: 295 NADVGAARAAFFPRLSLTAAFGFASPTLGALFQSSHNAWNVSPRLVLPIFDGGRLDAELD 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A++ +E +++ + A +EV + L S D++I + +V ++++L+ Y Sbjct: 355 LAKAREKEAVAHYEKAIQTAFREVADGLAGSATLDRQIEAQ-SRSVAGTARAVALAEARY 413 Query: 405 RQGRYSLLDILDIERA-TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 R G L +LD +R A + LS+ + ++A + V LY A+G G Sbjct: 414 RAGLEGRLALLDAQRQLQAGQQTLLSLRREEIANA-VALYKALGGG 458 >gi|307731511|ref|YP_003908735.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586046|gb|ADN59444.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 551 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 205/464 (44%), Gaps = 42/464 (9%) Query: 17 GCTVGPEYTKP--HMPLLPTQFSIG--NSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P +P + + G ++ D WW + D LN L N Sbjct: 31 GCAVGPDYQRPAAEIPASYKEAAPGWKVAEPADQQDRGAWWTIYQDPQLNALEDKLNAAN 90 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-------------Q 119 TI Q A+ + RA FP+ A+ S + ++ST Q Sbjct: 91 QTIAQYAAAYRQARALVGEARAAYFPTLGATASGTRSGSGSSSSTSSASRSGVYNSYSLQ 150 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD+ W+ DL+G R + + A A A + A+L+ + L +Y R + Sbjct: 151 LDASWEPDLWGSVSRSVNAQKAGQQGAAADLANARLSAQATLAQTYFALRALDANQKLLD 210 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ L+G Sbjct: 211 ETVAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQASAIDNGVQRAQDEHAIAVLVG 270 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA+ F S P P + +P+ L+ RPDI E+K A + +IGIA Sbjct: 271 EPASTF-------SIPPMPLTATPPAVPAQMPSALLERRPDIASAERKAAAANEQIGIAI 323 Query: 297 SDLYPSLSL--NGSIA-------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + +PSL+L NG LT + F W+ GP+L +FD G ++ A Sbjct: 324 AAFFPSLTLSANGGFQSSVFSQLLTAPSRF------WTVGPQLAATLFDAGLRRAQTEAA 377 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + T++ VL A ++VE+ L S ++ + Q AVE ++++++ Y+ G Sbjct: 378 RAAYDQSVATYRLAVLTAFQDVEDNLASQRILEQEIVVQQKAVESARQALAIVTNEYKAG 437 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L + E L Q S V L A+G G++ Sbjct: 438 TVGYVNVLTAQTTAFTAEQKLQTIAGQRMVSSVGLVKALGGGWD 481 >gi|255015331|ref|ZP_05287457.1| outer membrane protein oprM precursor [Bacteroides sp. 2_1_7] Length = 463 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 190/421 (45%), Gaps = 21/421 (4%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS- 99 S + N+ L W E F D L L++ L N+ + A R+ AK + S R PS Sbjct: 50 SADTTNMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAVLRVEEAKVLLTSARLSFLPSI 109 Query: 100 ---SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 +I+ T + W++DLFG + + +S ++Y Q ++ V Sbjct: 110 NLAPQGTITKMESSGYVKAYTAPAAASWEVDLFG--KLLNASRGQ-KASYLQSQYSRQAV 166 Query: 157 ISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 S+LI +Y ++ I + +D+YK+N+ + G ++ ++ ++ A Sbjct: 167 RSQLIGGIANTYYTLLMLDRQVEITAKTVDIYKENVRVMEAMKIAGMATEAAVTQMRAAY 226 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + LE R +++S LL + ++ P I +G+P L+ Sbjct: 227 HQVSGSLIELESQVRSVENSLSVLLAKAPQQIDRGTLEE--QVMPE---DIMVGVPLQLL 281 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGP 328 NRPD++ E LA + A++ YP L++ + T+ + PG + Sbjct: 282 ENRPDVKIAEMTLASAYYTTNQARAAFYPGLNITATAGWTNGSGIQVANPGQFMFQALA- 340 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF+ GK+ +N++ +++ + + +Q+T+L A KEV +AL + K + + + Sbjct: 341 SLAQPIFNNGKLVANLKVSKAEEKIAQMNYQQTILEAGKEVSDALHEYDATSKKLVQDRA 400 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E +K+++ + ++ + + L+IL +++ ++ Q ++ V LY AIG Sbjct: 401 QIEQLEKAVAYTSALFQSAQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVVSLYSAIGG 460 Query: 449 G 449 G Sbjct: 461 G 461 >gi|237722071|ref|ZP_04552552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448940|gb|EEO54731.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 458 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 213/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 19 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T+ Q + + W++ Sbjct: 76 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTHKATQTYSLPVTASWEL 134 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 135 DVFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 191 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 192 AWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQISQVENSLALLLAETPR 251 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 252 NYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 305 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 306 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 364 Query: 358 WQETVLNAIKEVENALTSIN--EDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + + K+I +T LQ A+ +S +L M G + Sbjct: 365 FQQTLLNAGSEVNDALIAYQTCQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 417 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 418 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 456 >gi|262381040|ref|ZP_06074178.1| outer membrane protein oprM [Bacteroides sp. 2_1_33B] gi|262296217|gb|EEY84147.1| outer membrane protein oprM [Bacteroides sp. 2_1_33B] Length = 463 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 190/421 (45%), Gaps = 21/421 (4%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS- 99 S + N+ L W E F D L L++ L N+ + A R+ AK + S R PS Sbjct: 50 SADTTNMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAVLRVEEAKVLLTSARLSFLPSI 109 Query: 100 ---SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 +I+ T + W++DLFG + + +S ++Y Q ++ V Sbjct: 110 NLAPQGTITKMESSGYVKAYTAPAAASWEVDLFG--KLLNASRGQ-KASYLQSQYSRQAV 166 Query: 157 ISKLIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 S+LI +Y ++ I + +D+YK+N+ + G ++ ++ ++ A Sbjct: 167 RSQLIGGIANTYYTLLMLDRQVEITAKTVDIYKENVRVMEAMKIAGMATEAAVTQMRAAY 226 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + LE R +++S LL + ++ P I +G+P L+ Sbjct: 227 HQVSGSLIELESQVRSVENSLSVLLAKAPQQIDRGTLEE--QVMPE---DIMVGVPLQLL 281 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGP 328 NRPD++ E LA + A++ YP L++ + T+ + PG + Sbjct: 282 ENRPDVKIAEMTLASAYYTTNKARAAFYPGLNITATAGWTNGSGISVANPGQFMFQALA- 340 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF+ GK+ +N++ +++ + + +Q+T+L A KEV +AL + K + + + Sbjct: 341 SLAQPIFNNGKLVANLKVSKAEEKIAQMNYQQTILEAGKEVSDALHQYDATSKKLVQDRA 400 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +E +K+++ + ++ + + L+IL +++ ++ Q ++ V LY AIG Sbjct: 401 QIEQLEKAVAYTSALFQSAQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVVSLYSAIGG 460 Query: 449 G 449 G Sbjct: 461 G 461 >gi|170691758|ref|ZP_02882922.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170143042|gb|EDT11206.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 484 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 109/469 (23%), Positives = 209/469 (44%), Gaps = 48/469 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFNDTSLNKLVKI 67 L C+ P YT P + + P ++ G + + WW FND LN+L Sbjct: 21 LTACSTLPRYTNPSVDV-PDHYA-GTAAPGWAVAAPADAQPRGPWWTLFNDDELNRLEAR 78 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA----------------SISHRFIPN 111 N T+ +A ++ AA+ + RA P+ A S++ + +P+ Sbjct: 79 VDVSNQTVAKAVAQLQAARAMVDYQRAGYAPTITAGAAQSRARLSQNVLGHSLAGKTVPD 138 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + W+ DLFG+ + ++ N ++ A ++ +L++ S L Y D R Sbjct: 139 YSVG----VSASWEPDLFGRVKDATVNARDNAQASEADLESVRLSIASDLALDYFDLRSL 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS---IESDIPTLEKSFR 227 + + + Y +++ + GA ++ + + +++S ++SDI + Sbjct: 195 DRQKKLLDDSVTAYTAALKIVQQQLNDGAIDASAVAQAQTQLESTRTMDSDIDVQRAQLQ 254 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 H I+TL+G PA+ F Q + ++ +P I G+P+ L+ RPDI E+++A Sbjct: 255 ---HAIATLIGVPASSFALPQQVR------DIALPQIPAGLPSQLLERRPDIAAAERRVA 305 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+IG A + YP L+L+ + L P + WS G +L +FD G+ + Sbjct: 306 AANAQIGEAHAAFYPDLTLSATAGLESTFFAPWLTAPSLFWSIGSQLAGTLFDGGRRDAA 365 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ A + +++TVL A ++VE+ L+++ Q A + ++ L+ Sbjct: 366 LKGANAQYDGAVADYRQTVLVAFQQVEDNLSALTTLASEADSEQRATSAAELALKLTTNR 425 Query: 404 YRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G S LD++ + A I R++ S V L A+G G++ Sbjct: 426 YQAGAVSYLDVVTAQTIALTNERTAEQIDARRIDAS-VQLLKALGGGWD 473 >gi|206575771|ref|YP_002240685.1| cation efflux system protein CusC [Klebsiella pneumoniae 342] gi|206564829|gb|ACI06605.1| cation efflux system protein CusC [Klebsiella pneumoniae 342] Length = 461 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 103/456 (22%), Positives = 208/456 (45%), Gaps = 25/456 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + W F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPAAPV-PQQFSLSQNKLVTATAGYQETGWRTFFVDPQVKSLIST 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD P S + LK ++T L+ Sbjct: 71 ALINNRDLRMATLKVQEARAQYRVTDADRSPQLNGDGSTTYGGKLKGDTTTSSDYAAGLN 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 131 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVANDT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 191 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ + + + + ++ RPDI E L + A IG A++ + Sbjct: 249 --SYQHLPDDSASSAIDLQGVTLPPSLSSAILLQRPDILEAEHSLRAANANIGAARAAFF 306 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS++L S++ + +N W+F PK+ LPIF+ G+ ++N+ AE Q+Q + Sbjct: 307 PSITLTSSLSGSSSELSSLFNAGSAMWNFIPKIELPIFNAGRNQANLDLAEIRQQQQVVN 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A KEV +AL + Q + ++ + YR G S +++L Sbjct: 367 YEQKIQSAFKEVADALALRQSLADQIAAQQRYLASLNITLQRATALYRHGAVSYIEVLSA 426 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 427 QRDIFTTQQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|17549038|ref|NP_522378.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum GMI1000] gi|17431289|emb|CAD17968.1| probable outer membrane drug efflux lipoprotein [Ralstonia solanacearum GMI1000] Length = 491 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/461 (22%), Positives = 205/461 (44%), Gaps = 30/461 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-------IDTLKWWESFNDTSLNKLVKIAL 69 GCT+ P Y +P P+ + + + + + W + F D SL +++ +AL Sbjct: 17 GCTLMPTYQQPAAPVPAAFAGASDDRGDTDGTRAATPVAEIGWRDVFTDPSLQRVIDLAL 76 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-NSTGQLD------- 121 N + A + A+ A LFP+ AS S ++TGQ Sbjct: 77 ANNRDLRVAVLNLEKARAQYRVQDAALFPTVKASGSESASRTPAALSATGQPVVSHTYSA 136 Query: 122 ----SDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R + S L+ A V+ +++++++++ +Y+ ++ + Sbjct: 137 TLGFSAYELDLFGRVRSL--SAQALEQYLATVEARRSSQISLVAEVATAYLTLAADQDLL 194 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A L L+ + G S+L+L + + + + D+ + + + Sbjct: 195 KLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVDAARVDVERYTAQVAQDRNALV 254 Query: 235 TLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G PA E L + ++ I G+ +DL++ RPDI E L + A I Sbjct: 255 LLVGADVPA-ELLPRSLPDPSAASGSVLATIPPGLASDLLQRRPDILQAEHDLKAANANI 313 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ +PS+SL G+ + + F G + WSFGP++ LPIFD G ++N+ A + Sbjct: 314 GAARAAFFPSISLTASAGTSSASLAGLFKGGSGVWSFGPQISLPIFDGGANRANLDIANA 373 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 S +++ + A +EV +AL + + Q V+ S L+ +++G Sbjct: 374 SRDIALAQYEKAIQTAFREVSDALAQRGTLGRQLDAQQSLVDATSDSYQLATARFKRGVD 433 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L++LD +R+ + +L + + Y +G G+ Sbjct: 434 SYLNVLDSQRSLYTAQQNLINTRLSRLTNLATFYKTLGGGW 474 >gi|73539060|ref|YP_299427.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72122397|gb|AAZ64583.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 516 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/464 (20%), Positives = 208/464 (44%), Gaps = 33/464 (7%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIG---------NSKNLINIDTLKWWESFNDTSLNKLV 65 L CT+ P Y +P P+ P + G ++ +L W + F D L +L+ Sbjct: 27 LTACTLEPTYERPDQPV-PNAWPTGAAYVQGTGVQAQAQTPAASLGWEDFFTDPGLRRLI 85 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN-----------L 112 ++AL N + AT I+ A+ RA FPS + AS+ IP + Sbjct: 86 ELALANNRDLRMATLAIDQARAQYRIQRAAQFPSLDANASMVATRIPGALIGQGAQSSVI 145 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARHFK 171 + G + +++D+FG+ R ++ A +V A++++++++ +Y+ + + Sbjct: 146 HAYAAGVGFNAFELDVFGRVRSLKHEALEQYLAVQEVQRSAQISLVAEVASAYLTLQADR 205 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + I+ L + + +++ G +++ + + + ++++ + + + + Sbjct: 206 ALLKISQDTLKVQQDTVQMVERSKRAGGMAQIDMHRAQTQLETARVGVEQYTRQVAQDEN 265 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L+G L Q N + + G+P+ L+ RPDI E +L + A Sbjct: 266 ALTLLVGTQLPADLPAPQPFENT---SFVAELPPGLPSALLEQRPDIMAAEHRLKAANAD 322 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS+SL +I + + G W+F P++ +PIF G ++ + ++ Sbjct: 323 IGAARAAFFPSISLTAAIGVA-STALAGLFSSGMAWAFAPQITMPIFHGGANQARLDASK 381 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++T+ A +EV + L + D++ + + E+ +++ LS + +R G Sbjct: 382 VQKDINVAAYEKTIQQAFREVADGLAARGTYDRQAAAQETLSREI-EETRRLSEMRFRNG 440 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + D +R + L + S VDLY A+G G++ Sbjct: 441 VDNYFPVFDAQRQLYSAQQTLVTIRLARLTSRVDLYKALGGGWS 484 >gi|283955789|ref|ZP_06373280.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 1336] gi|283792744|gb|EFC31522.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 1336] Length = 492 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 113/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKFGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGNRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ N+Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQNYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLESRQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|258542058|ref|YP_003187491.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256633136|dbj|BAH99111.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01] gi|256636193|dbj|BAI02162.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-03] gi|256639248|dbj|BAI05210.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-07] gi|256642302|dbj|BAI08257.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-22] gi|256645357|dbj|BAI11305.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-26] gi|256648412|dbj|BAI14353.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-32] gi|256651465|dbj|BAI17399.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654456|dbj|BAI20383.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Acetobacter pasteurianus IFO 3283-12] Length = 521 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 109/485 (22%), Positives = 214/485 (44%), Gaps = 46/485 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT----QFSIG---NSKNLINIDTLKWWESFN 57 RA + ++L GC VGP Y +P + P Q + G +L I WW +N Sbjct: 19 RAASLMAPLVLMGCMVGPNYKRPSATISPKFKELQPAPGWNYAQPSLAAIPKGAWWTLYN 78 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------------ 99 D LN+L N + Q R A+ I ++RA+L+P+ Sbjct: 79 DPLLNQLESQVEINNQNVAQYEARYRNARAAINAIRAELYPTLSGALSFNRQSSGRGSRS 138 Query: 100 -----SYASISHRFIPNLKTNSTGQ-LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 +Y + N N+ + W +DL+G RR I++ + ++ A + A Sbjct: 139 SGTIINYGDTTSSVASNTTENTYAMGASASWDLDLWGAIRRQIQAQVTEAQASAADLANA 198 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 KL+ ++L +Y + R+ + + +D Y+++ +++ ++ G +L++ + ++ Sbjct: 199 KLSYQAQLATAYFNLRYQDSLHDLLQKNVDFYERSYQITKNQYDAGTADPTTLMQAKTQL 258 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPAD 270 + + + + H I+ L+G PA + + + IP I + +P++ Sbjct: 259 EQTRAQATATDAARAGYEHAIAILMGKAPADLSIPHGALTRD-------IPAIPVAVPSE 311 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L++ RPD+ E+++ + A+IG A + YP + L S + + D N W+ G Sbjct: 312 LLQRRPDVSAAERRMEEYNAQIGAALAAFYPDVKLTASYSYSGDPVGALVQVANRIWALG 371 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +F+ G + +R AE++ +++TVL A+++VE+ L ++ + Sbjct: 372 ASATETLFEGGARTAAVREAETNYNYYVAAYRQTVLTALQQVEDQLANLRVLADQANQQA 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AVE K++ +S Y G ++ E A + E L I + ++ S V L A+ Sbjct: 432 VAVEAANKAVQISFNQYMAGTQIYTTVITAEVTALSNAETALQIQQSRILDS-VTLIEAL 490 Query: 447 GSGYN 451 G G++ Sbjct: 491 GGGWD 495 >gi|221065617|ref|ZP_03541722.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220710640|gb|EED66008.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 492 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 107/475 (22%), Positives = 211/475 (44%), Gaps = 48/475 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPL-------------LPTQFSIGNSKN-LINIDTL-KWWE 54 ++ VLL GC VGP++ +P P + S G ++ L +D +WW Sbjct: 19 VWAVLLTGCAVGPDFQRPPPPANAAFTREAFPAATVAAPGSTGQAQQFLAGVDVPDRWWT 78 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F L+ LV+ AL+ N T+ A + A+ + + R P A + P+ + Sbjct: 79 HFQSPELDALVQEALKANPTVAAAQAALRQAQAMVKAQRGAYLPRVQAG----YTPSRQK 134 Query: 115 NS--------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 ++ T Q+ + D+FG RR +E+ A+ ++ Q++ L + + ++ + + Sbjct: 135 DAGESPFTLHTAQVSVGFTPDVFGGNRRAVEALRASAEAQRFQLEATYLTLAANVVTTAV 194 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +++I+ I+ + +E+ + G + L + +EA + E +P LEK Sbjct: 195 EQASVRDQIAATRAIVLANTRALEILRRQLAVGQVAGLDVALVEAALAQSEQQLPELEKQ 254 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQE 282 + + ++ L+G PA H S L +P + + +P+ L+ RPD+R Sbjct: 255 LEQSRNALAALIGRLPAEAPEHQFSIDS------LKLPQELPLSLPSQLVEQRPDVRVAA 308 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 +L + A+IG+A +++ P SL + F N WS ++ +F G Sbjct: 309 AELQAASAQIGVATANMLPQFSLTAARGGAAGAFGQMFATGNPFWSIVAEMSQTLFAGGT 368 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + A+++ + ++E V+ A ++V N L ++ D + L AV + + Sbjct: 369 LMYERKAAQAAFDQSAALYKEAVIAAFQDVSNTLYALKSDAE---ALNAAVRTERATQRA 425 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL-AKSYVD---LYIAIGSGY 450 M+ +Q +D L + A+ + + IA+ Q A VD L+ A+G G+ Sbjct: 426 LMLVQKQLAAGEVDALALT-ASQQAYQEAVIARVQAQAARLVDTAALFQALGGGW 479 >gi|290512114|ref|ZP_06551481.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Klebsiella sp. 1_1_55] gi|289775109|gb|EFD83110.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Klebsiella sp. 1_1_55] Length = 461 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 208/456 (45%), Gaps = 25/456 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI---NIDTLKWWESFNDTSLNKLVKI 67 I L GC ++ P+Y +P P+ P QFS+ +K + W F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPAAPV-PQQFSLSQNKLVTATAGYQETGWRTFFVDPQVKSLIST 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLD 121 AL N + AT ++ A+ AD P S + LK ++T L+ Sbjct: 71 ALANNRDLRMATLKVQEARAQYRVTDADRSPQLNGDGSTTYGGKLKGDTTTSSDYAAGLN 130 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 131 LSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVANDT 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 191 LQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG-- 248 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + H +++ + + + + ++ RPDI E L + A IG A++ + Sbjct: 249 --SYQHLPDDSASSAVDLKGVTLPPSLSSAILLQRPDILEAEHSLLAANANIGAARAAFF 306 Query: 301 PSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P+++L S++ + +N W+F PK+ LPIF+ G+ ++N+ AE Q+Q + Sbjct: 307 PAITLTSSLSGSSSELSSLFNAGSAMWNFIPKIELPIFNAGRNQANLDLAEIRQQQQVVN 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + +A KEV +AL + Q + ++ + YR G S +++L Sbjct: 367 YEQKIQSAFKEVADALALRQSLADQIAAQQRYLASLNITLQRATALYRHGAVSYIEVLSA 426 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 427 QRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|294644468|ref|ZP_06722229.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294806818|ref|ZP_06765644.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|292640190|gb|EFF58447.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|294445988|gb|EFG14629.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] Length = 454 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 213/459 (46%), Gaps = 45/459 (9%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 L+GC + YTK ++P G +++ + + W E F D L L+++ LQ Sbjct: 15 LSGCGI---YTKYEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQT 71 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKI 126 N A R+ A+ ++S + P+ +A + + T Q + + W++ Sbjct: 72 NTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTASWEL 130 Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILD 182 D+FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 131 DVFGRMRNSKKQAKVL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDISRQTEE 187 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 188 AWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETPR 247 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + KQ F + +IGIP ++ +RPD+R E+ L + A+S YP Sbjct: 248 NYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFYP 301 Query: 302 SLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 302 SITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAALG 360 Query: 358 WQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G + Sbjct: 361 FQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNTT 413 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + +S ++LY A+G G Sbjct: 414 YLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 452 >gi|270295129|ref|ZP_06201330.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274376|gb|EFA20237.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 468 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 195/421 (46%), Gaps = 29/421 (6%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 + + + W E F D L L++ LQ N A R+ A+ +LS + PS +A Sbjct: 59 LGLGGMDWHELFTDPHLQALIEQGLQNNTDYQSAQLRVEEAEATLLSAKLAFLPS-FALA 117 Query: 105 SHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 + + ++ Q + + W++D+FG+ R+ + L YAQ + V ++ Sbjct: 118 PQGTVSSFDSHKATQTYSLPVTASWELDIFGRMRNAKKQSKAL---YAQSQDYRQAVRTQ 174 Query: 160 LIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 LI +Y ++++I+ Q + +++ + + G ++ ++ ++EA + Sbjct: 175 LIAGIANTYYTLLMLDQQLAISRQTEETWRETVASTRALMNAGMANESAVSQMEATYYQV 234 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + LE+ ++++ LL A HY ++ + + +IGIP ++ R Sbjct: 235 QTSVLDLEEQINQVENSLALLL---AETPRHY--ERGVLAEQQFPVGFSIGIPVQMLSCR 289 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLY 331 PD+R E+ L + A+S YPS++L GS T+ PG + G L Sbjct: 290 PDVRSAERTLEAAFYGTNAARSAFYPSITLGGSAGWTNSAGSMIVNPGKFLASAVG-SLT 348 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED---KKIVTKLQH 388 P+F +G++ + R A + +E + +Q+T+LNA EV +ALT+ +++ K Sbjct: 349 QPLFARGQVIAQYRIARAQQEEASLAFQQTLLNAGSEVNDALTAWQTSLSKSELLDKQVA 408 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +++ +S SL M G + L++L + ++ + + +S ++LY A+G Sbjct: 409 SLQTAARSTSLLM---EHGNTTYLEVLTARQTLLNAQLAQTANRFSEIQSLINLYKALGG 465 Query: 449 G 449 G Sbjct: 466 G 466 >gi|326319373|ref|YP_004237045.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376209|gb|ADX48478.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 474 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 97/417 (23%), Positives = 177/417 (42%), Gaps = 15/417 (3%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYA 102 D +WW+ D L +L+ A + I QA R+ A+ ++ RA L P+ + + Sbjct: 53 DLARWWDRLGDPLLTELIGRAQDVSPDIAQARSRVEQARATQVAARAALLPTLDAQGNAS 112 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLI 161 + + L T G + + W++DLFG E + A AQ A+++V +++ Sbjct: 113 RGTSQQAAGLATTVQGTVQAGWEVDLFGGNAAAEEAARQRFAGAQAQWHEARVSVAAEVA 172 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y R +A ++ L+ G T+ +L A+ E + Sbjct: 173 TQYDAWRQCLRLTEVAQSDARSRTESARLTEASERAGFTAPATLAL--AQASGAEGRVRA 230 Query: 222 LEKSFRMNV--HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ N+ + L G P E + +PA ++ RPD+ Sbjct: 231 EQQRMACNIDLKGLVALTGMPEAELRARAAASPAPQALPDALFAIDALPARVLAQRPDVY 290 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGP-KLYLPIF 335 E+++A + A +G A++ +P L+L GSI ++ NT WS GP + LP+F Sbjct: 291 AAEREVAAASADVGNARAQRFPRLTLAGSIGRAWGSTGGTSVATNT-WSIGPVGISLPLF 349 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ + + AE+ +E ++ V A+ EVE AL + + A + ++ Sbjct: 350 DAGRRAAQVDAAEARYEEAAQLYRANVRRAVSEVEQALVRLASTAARSADAERAAQGYRA 409 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S + +R G SLL++ + R E L +++ +++ LY A G G+ P Sbjct: 410 SFVATEARWRGGLASLLELEETRRTALNSETALITLRQERMAAWIGLYRAAGGGWEP 466 >gi|167722316|ref|ZP_02405552.1| outer membrane efflux protein OprC [Burkholderia pseudomallei DM98] Length = 394 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 171/353 (48%), Gaps = 24/353 (6%) Query: 114 TNST---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 TN+T Q ++ DLFG+ R++E+S A+ + A +L + + + +Y + R Sbjct: 33 TNATLWRAQGTVSYEADLFGRVGRNVEASRADEAQSQALFRSVQLALQADVAQNYFELRR 92 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + + L ++ ++L +F +G S+L + + + E+ + ++D + + + Sbjct: 93 LDSDQDLYRRTVGLREEALKLVQRRFAEGDISELDVSRAKNELATAQADAVGVARRRAAS 152 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQEKKL 285 H ++ LLG +F +F P+ + G+P+ L+ RPDI E+ + Sbjct: 153 EHALAILLGKAPADF---------SFSETPIAPVAVRVPAGLPSALLERRPDIAAAERAM 203 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP----KLYLPIFDKG 338 + A+IG+AKS +P L + G+ A T N F + + GP L LPIFD G Sbjct: 204 MAANARIGLAKSAYFPKLDITGAFGYEAATLGNLFLWSSRTFLLGPFAGTALTLPIFDGG 263 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + + +A + E+ +++ VL A +EVE+ L + + AV +++ Sbjct: 264 RRSAGVAQARAKYDEEVANYRQQVLVAFREVEDNLADLRLLDDQIRAQSDAVNASRRAAK 323 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS Y++G S LD++D ER+ + ++ + A S V+L A+G G+ Sbjct: 324 LSRTQYQEGAVSYLDVIDSERSVLESQLQSNQLTGTQAVSTVNLIRALGGGWG 376 >gi|95931051|ref|ZP_01313779.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] gi|95132947|gb|EAT14618.1| RND efflux system, outer membrane lipoprotein, NodT [Desulfuromonas acetoxidans DSM 684] Length = 432 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 190/408 (46%), Gaps = 17/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHR 107 WW+ L++L+ A N T+ QA R+ A+ + +DL+PS AS H+ Sbjct: 21 WWQQLGGDELDQLMTTAFSGNFTLRQAWSRVEQARATTIITGSDLWPSLDYNGNASHQHQ 80 Query: 108 FIPNLKTNSTG---QLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIP 162 + + T + L ++IDL+G+ R +++ + + D A++ + S++ Sbjct: 81 YKDDQHTRTESFALGLVGSYEIDLWGRIRS-QTTAQRREQQATEEDWRTARITLSSEIAG 139 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++++ +++ +I + + +EL+ L++ +G ++ LV+ + E+ E L Sbjct: 140 NWLNSVALQQQYTIIERQIKTATNIVELTQLRYLEGQATRSDLVERQQELHQFEQSRLEL 199 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E++ +++ L G + Q+Q P +P +G+PADL+ RPD+R Sbjct: 200 EQNLSQYRYDLCLLSGLAPGADIQVNQQQLPALTP---LP-PVGVPADLLAYRPDVRAAG 255 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKI 340 +L + A++D P++ L+ + F +W + + PIFD G Sbjct: 256 LRLNKGDWLVAAARADRLPAMRLSADAGYSS-TRFADLFDNWLANLAASVTGPIFDAGSR 314 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ + RA + A E ++ETV+ A+ EVE+AL + + + + +E +S+ + Sbjct: 315 RAKVTRARAEADELLAAYEETVITAVNEVESALLDERKISEQLAAVDQQIERRHQSLDNA 374 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 I Y G L L ++ + ++ + +R + V L+ A+G Sbjct: 375 YIRYLNGDDDYLSYLIVKLSVDTLQRERVQKQRDKLLARVALHRALGG 422 >gi|299069179|emb|CBJ40437.1| outer membrane drug efflux lipoprotein [Ralstonia solanacearum CMR15] Length = 488 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 34/463 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GCT+ P Y +P P+ + ++ + + W + F D SL +++ +AL Sbjct: 14 GCTLMPTYQQPAAPVPAAFAGASDNHGDTSGTQAATPVAEIGWRDVFTDPSLQRVIDLAL 73 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD----- 121 + + A I A+ A LFP+ AS S R L ++TGQ Sbjct: 74 ANSRDLRVAVLNIEKARAQYRVQDAALFPTVKASGSESAGRTPAAL--SATGQPVVSHTY 131 Query: 122 ------SDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDARHFKE 172 S +++DLFG+ R + S L+ A V+ +++++++++ +Y+ ++ Sbjct: 132 SATLGFSAYELDLFGRVRSL--STQALEQYLATVEARRSSQISLVAEVATAYLTLAADQD 189 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +A L L+ + G S+L+L + + + + D+ + + Sbjct: 190 LLKLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVDTARVDVERYTAQVAQDRNA 249 Query: 233 ISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + L+G PA E L ++ N+ I G+ +DL++ RPDI E L + A Sbjct: 250 LVLLVGADVPA-ELLPGSLPDNSAASGNVLATIPPGLASDLLQRRPDILQAEHDLKAANA 308 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS+SL S + + F G + WSFGP++ LPIFD G ++N+ A Sbjct: 309 NIGAARAAFFPSISLTASAGTSSASLAGLFKGGSGVWSFGPQVSLPIFDGGANRANLDIA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +S +++ + A +EV +AL + + Q V+ S L+ +++G Sbjct: 369 NTSRDIAVAQYEKAIQTAFREVSDALAQRGTLGRQLDAQQSLVDATSDSYQLATARFKRG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S L++LD +R+ + +L + + Y +G G+ Sbjct: 429 VDSYLNVLDSQRSLYTAQQNLINTRLSRFTNLATFYKTLGGGW 471 >gi|261364770|ref|ZP_05977653.1| TolC protein [Neisseria mucosa ATCC 25996] gi|288567078|gb|EFC88638.1| TolC protein [Neisseria mucosa ATCC 25996] Length = 484 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 208/484 (42%), Gaps = 58/484 (11%) Query: 12 IVLLAGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ +A C T P ++ +P TQ + + D WW+ +ND L+ L+ L Sbjct: 14 VLAIAACKNTEVPLNSQVELPETFTQDAAAKG----DADIGAWWQQWNDPVLSGLIAQGL 69 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS------------------------------ 99 Q + A R+N A+ + RADL P+ Sbjct: 70 AQGHDVKIAVSRLNEARAVAGAARADLGPTVGLSGKVGANYSKMDNPLDSNARALLSRYP 129 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-----SSLANLDSAYAQVDIAKL 154 +S++ I + T G L + W+ D+FG++R ++L + AY A++ Sbjct: 130 QASSLNGDTIDSQSTTLYGGLTASWEPDIFGKKRSDADAARYAALGQQELAYG----AQM 185 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V + +Y AR + R+ A Q + ++ + +F G S + + + ++ + Sbjct: 186 LVAGDIADNYFKARAAQGRLKTADQTVATLRRMVRYIEGRFKAGHVSGYEVNEAKVQLTA 245 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 E+ T+ + V +I+ L G P T L + QP+ P P L+ Sbjct: 246 AEAKRATIGAEYAAYVRSIAVLTGNMPQTFTLPESSVDALAHQPS--APSGQ-TPQGLLE 302 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGP 328 RPD+R Q ++ AK AK+DL P ++ G I + D S G+ + S G Sbjct: 303 RRPDLRAQAAQVNAYAAKFASAKADLLPRFTISFMGQGGRIGVDGDRSLTGWASLLSVG- 361 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + P+F G+IK+NI+ A++ Q + + + +L A+ EV++A + + LQ Sbjct: 362 -IQTPLFTNGRIKANIKAADARLQTALLEYDKRLLTALGEVDSAYQGVESLSRQTELLQT 420 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDI-LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + + + +R G Y LD+ L A +++ +L A+ A+ V LY A+G Sbjct: 421 AHNQAARHATDTEKMFRNG-YKTLDVALKAHIAEGQMQENLISARLARAQMLVSLYKALG 479 Query: 448 SGYN 451 G++ Sbjct: 480 GGWS 483 >gi|330816903|ref|YP_004360608.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] gi|327369296|gb|AEA60652.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia gladioli BSR3] Length = 517 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 114/469 (24%), Positives = 194/469 (41%), Gaps = 39/469 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNL--------INIDTLKWWESFNDTSLNKLVKI 67 GCTVGP+Y PL P S + L + +D WW F+D L +L++ Sbjct: 37 GGCTVGPDYRPADSPLAPNYASQDALRTLQARPAAEPVALDA--WWLGFHDPVLTRLIER 94 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFIPNLKTN 115 AL QNL + A R+ A+ A P S S R L Sbjct: 95 ALAQNLDLAAAEARVAQARAAAADAGAQRLPRLDVEGTAARQRQSLESPLGRIGSALPGY 154 Query: 116 STGQ------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDAR 168 Q L + W++DL G R + + A + +++V + +Y R Sbjct: 155 DRNQGYTQLGLGASWELDLAGGLRRQAQAASAEAEAAEALHAGSRVSVAADAADAYFRLR 214 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + RI+I Q ++ + + L + G ++ + EA + S P L Sbjct: 215 GLQARIAIVEQQIEADRHLVSLVRDRVGNGVATRREQAEAEARLAQTRSQRPPLLAERAR 274 Query: 229 NVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G P T ++ P L P IG P L+R RPD+ E++LA Sbjct: 275 QANRLDILMGSAPGTYTAQLGAPAADPVVPGL--PAGIG-PDTLLRRRPDVVAAERRLAA 331 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIKSN 343 S A +G A ++ YP LSL+G + + P + + +F P L +FD G++ + Sbjct: 332 SNAGVGAALAEYYPKLSLSGILGFEALDG-PLFKSA-AFQPGALAGLRWRLFDFGRVDAE 389 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +A E +++ VL A ++VENA+T + +L VE + + Sbjct: 390 VAQARGRHAEALAVYRQAVLRAAEDVENAVTDWAQIGAQRDELARQVEAEALAQRAARDA 449 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y QG SL+++L ++ + + A++ V + ++G G+ P Sbjct: 450 YAQGDASLVEVLVEDQQWLAARGEQARLNADYARAAVATFRSLGGGWTP 498 >gi|258544650|ref|ZP_05704884.1| NodT family efflux transporter, outer membrane factor lipoprotein [Cardiobacterium hominis ATCC 15826] gi|258520068|gb|EEV88927.1| NodT family efflux transporter, outer membrane factor lipoprotein [Cardiobacterium hominis ATCC 15826] Length = 486 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 112/452 (24%), Positives = 211/452 (46%), Gaps = 37/452 (8%) Query: 18 CTVGPEYTKPHMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 C P + + +P+ + NS N +WW + +L++L+ L N + Sbjct: 31 CATTPHNLQQDLAQSAIPSAWMFQNSDRAANSHR-EWWRDYGSAALDQLITRGLAHNQNL 89 Query: 76 LQAT---ERINAAKENILSVRADLF-----PSSYASISHRFIPNLKTNSTGQLDSDWKID 127 A ++ A EN R + S+ ++SH N S+ L +++ D Sbjct: 90 AAAGYAWQKSRIALENSDVNRGADYSGGVNASAGRNLSHGGHSNQNYGSS--LGINYQAD 147 Query: 128 LFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+G+ R + A A A+ +A +L++I +I Y+ +++++ Y+K Sbjct: 148 LWGKLRLASDNAAWESQATAEDLLATRLSLIGDIINQYLQIASLNDQLALNA----AYRK 203 Query: 187 N----IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 N ++L+ K G+ S L L + E +++++ LE + +++LLG P + Sbjct: 204 NAAQTLDLTRTKVHAGSASPLDLREAEQNRTNLDANRDRLENQRQQAETTLASLLGAPVS 263 Query: 243 EFLHYMQKQSNNFQPNL---YIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + N +P+L +P I+ GIPA L+ RPD+R + +L ++ I IA+ D Sbjct: 264 RVI--------NQEPSLKTLTVPAIDSGIPAHLLAQRPDLRAAQYRLQQNLGNIAIAERD 315 Query: 299 LYPSLSLNGSIALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 YP L+L ++ + + +N + + LP + K + R AE+S Q+ Sbjct: 316 YYPDLTLGANLGTSANRLLELLHNPIGAISANITLPFLNAHKKELARREAETSYQQNLAN 375 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++T+ A+ E +NA+ ++ + + LQ + K +L+ I Y+ G SL D+LD Sbjct: 376 YRQTLYRALGETQNAILNLKQSQDEARHLQERLAQAKDIENLTRIRYQAGAASLQDVLDK 435 Query: 418 ERATAKVEVDLSIAK-RQLAKSYVDLYIAIGS 448 E AT VE L + QL +S + L++A+G Sbjct: 436 ENATRGVEESLLTNRYEQLTRS-LTLHLALGG 466 >gi|157165728|ref|YP_001466846.1| putative flagellar hook-associated protein 2 [Campylobacter concisus 13826] gi|112801318|gb|EAT98662.1| TolC protein [Campylobacter concisus 13826] Length = 448 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 95/421 (22%), Positives = 209/421 (49%), Gaps = 14/421 (3%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 N+ +N+DT WW+ ++ + L++LV++AL+ N + +A +N A ++A+L PS Sbjct: 32 NASRELNLDT-SWWKQYHQSYLDELVELALKNNTDLAKAAINVNKALAQAGVLQANLIPS 90 Query: 100 SYASISHRFIPNLK-----TNSTGQ-LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 A I N+K T S G + +++DL+ + + ++++ D++ ++ + Sbjct: 91 FNAGIEAGSSKNIKEGGAVTRSFGSSIGLSYELDLWQKLANSKDAAMFEADASKFDLEAS 150 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 KL+VI+ + +Y + + I QIL++Y K E+ LKF G LSL ++ ++ Sbjct: 151 KLSVINSVADAYFQILYLNDSIKTYEQILEIYNKLNEIVGLKFKLGKEEALSLKQINSQQ 210 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 S ++ I + +K + LL P E ++ + P + +++ +P Sbjct: 211 LSAQNKIESAKKELVTAKKTLRILLNERPEFE----LKFEDLTLSPVKRVGVDLDVPTST 266 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KL 330 I NRPD+R ++ + + ++ + YPS++L S+ + D ++ + G L Sbjct: 267 IANRPDLRAAIYRIEEGILNYKASQKEFYPSITLGASLKSSTDKKEEAFSLKFLNGNIAL 326 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP + K+KSN++ +E++ + + + T+ +A+ E++ D+ ++T Q + Sbjct: 327 NLPFLNYHKLKSNLKVSEANFELAKLNYISTLNSALNEIDAFYKGYLNDEALLTNYQEQI 386 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +++ + + Y G+ L L+ + + + ++ L AK L + +++Y A+ + Sbjct: 387 KNYEEISKIYELKYSYGKVELKQFLEAKNSELEAKIGLLKAKYTLLQDELNIYKAMAGKF 446 Query: 451 N 451 N Sbjct: 447 N 447 >gi|300935394|ref|ZP_07150392.1| putative outer membrane efflux protein OprM [Escherichia coli MS 21-1] gi|331682782|ref|ZP_08383401.1| putative outer membrane efflux lipoprotein [Escherichia coli H299] gi|300459372|gb|EFK22865.1| putative outer membrane efflux protein OprM [Escherichia coli MS 21-1] gi|331080413|gb|EGI51592.1| putative outer membrane efflux lipoprotein [Escherichia coli H299] Length = 457 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 103/456 (22%), Positives = 217/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL N ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRNTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|167578530|ref|ZP_02371404.1| outer membrane efflux protein [Burkholderia thailandensis TXDOH] Length = 463 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 94/412 (22%), Positives = 191/412 (46%), Gaps = 19/412 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPTLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNVSRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ G+ +++DL+G+ +++ L++ A D A+L++I Y Sbjct: 119 LDTHRMGRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLSLIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + I+I + ++ +EL + GATS L L + E + ++ +D L + Sbjct: 179 QIAYLNQLIAIGDANIAYARRTLELVQSRHAAGATSGLDLAQAERNLSALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L P Q + P +P I G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFDRPPQR-----QAAERDALPAAPLPDIAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L G++ T S N + G L LP ++ Sbjct: 294 LRESLASVDVTRTSFYPTFTLTGNVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL++ + + + HA+ +++ +L+ Sbjct: 353 QIKVSKSQYEEAVVNFRQSLYRALGEVENALSARAQLEAEADERAHALAQAQRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 + G + LD ++ + ++A+ QL + + + LY A+G P Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMSLYKALGGEDRP 462 >gi|84623914|ref|YP_451286.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367854|dbj|BAE69012.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 494 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 110/490 (22%), Positives = 200/490 (40%), Gaps = 52/490 (10%) Query: 1 MNILRAIF--SLFIVLLAGCTVGPEYTKPHMPLL---------------------PTQFS 37 M LR+ S V LA C VGP++ +P P QF Sbjct: 1 MTHLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFE 60 Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 G WW +F+ LN +V+ AL+ N + A + A++ + + R Sbjct: 61 PGQEV------PAAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWL 114 Query: 98 PSSYASIS-----HRFIPNLKTN-------STGQLDSDWKIDLFG-QRRHIESSLANLDS 144 P + + + +P T QL + +D+FG RR +E++ A + Sbjct: 115 PQADLHVDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQA 174 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 Q D A L++ + ++ + I + ++ A + + ++ L+ + T GA Sbjct: 175 QRDQRDAAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQ 234 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-- 262 ++ + ++ +P LEK ++ L G +E ++ + L +P Sbjct: 235 VLAQRTALAQAQATVPPLEKQLEQQRTLLAILGGQVPSE----AADEAFTLE-TLQLPAQ 289 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPG 319 + + +P+ L+ RPDIR E + + A IG+A + PS++L+ + + F Sbjct: 290 LPLSLPSQLVEGRPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAA 349 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 NT WS L P+F G + R AE+ + ++ VLNA EV NALT++ D Sbjct: 350 GNTQWSLAGSLLQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSD 409 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + + A L +++++ G + D+L ++A + A+ Sbjct: 410 AQSLRACADAQALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDT 469 Query: 440 VDLYIAIGSG 449 V LY A+G G Sbjct: 470 VALYQALGGG 479 >gi|209518898|ref|ZP_03267710.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209500700|gb|EEA00744.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 539 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 111/438 (25%), Positives = 190/438 (43%), Gaps = 44/438 (10%) Query: 4 LRAIFSLFIVLL----AGCTVGPEYTKPHMPLL--PTQFS--IGNSKNLINIDTLK--WW 53 L ++ +L + LL AGC VGP+Y H PL+ P +S G +K N K WW Sbjct: 17 LPSVATLAVALLTLFNAGCMVGPDY---HRPLVSVPATYSELPGWTKAEPNATGPKGTWW 73 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------- 105 +FND +++L + N T+ A + A LFP+ A+ S Sbjct: 74 TAFNDPLIDELEPLVAVSNQTVRADYANYQEALAEVRVAHAALFPTIGATGSATRERATS 133 Query: 106 -----HRFIPNLKTN---STGQLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 N T + G L+ + W DL+GQ RR +E + A S+ A + A L Sbjct: 134 GSVSSSGSFANGTTARIVNAGTLEGNVSWAPDLWGQVRRTVEENAATAQSSEATLANATL 193 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + L + I+ R I + + + Y+ +++ + G ++ +++ + Sbjct: 194 SEQVALATAIIELRTSDANIDLLQETVVAYQHFLDVVSEQDRAGTIPPSDVITARSQLNT 253 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +SD+ L + N H I+ L+G E + + P L + +G+P+ L+ Sbjct: 254 AKSDLIALGVARAQNAHAIAVLVGKNPEE----LSITHSTAMPALPT-VPVGVPSTLLER 308 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLY 331 RPDI E+K+A A IG+ + YP +SL+G T + N WS G Sbjct: 309 RPDIAAAERKMAAQNAAIGVEVAAYYPDISLSGVAGFTQSPLNGLLKAANYVWSLGASAT 368 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHA 389 +FD G +N+ A+++ ++ TVL A + VE+ L+ + D+ +V L+ A Sbjct: 369 ETLFDGGLRGANVDAAKAAYDSTVANYRGTVLGAFQNVEDDLSGLRILADQAVV--LEDA 426 Query: 390 VELHKKSMSLSMINYRQG 407 V + ++ Y G Sbjct: 427 VLNADRGAEIAFNEYEAG 444 >gi|83717729|ref|YP_439987.1| outer membrane efflux protein [Burkholderia thailandensis E264] gi|167616672|ref|ZP_02385303.1| outer membrane efflux protein [Burkholderia thailandensis Bt4] gi|257143168|ref|ZP_05591430.1| outer membrane efflux protein [Burkholderia thailandensis E264] gi|83651554|gb|ABC35618.1| outer membrane efflux protein [Burkholderia thailandensis E264] Length = 463 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 94/412 (22%), Positives = 191/412 (46%), Gaps = 19/412 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPTLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNVSRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ G+ +++DL+G+ +++ L++ A D A+L++I Y Sbjct: 119 LDTHRMGRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLSLIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + I+I + ++ +EL + GATS L L + E + ++ +D L + Sbjct: 179 QIAYLNQLIAIGDANIAYARRTLELVQSRHAAGATSGLDLAQAERNLSALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L P Q + P +P I G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFDRPPQR-----QAAERDALPAAPLPDIAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L G++ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGNVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL++ + + + HA+ +++ +L+ Sbjct: 353 QIKVSKSQYEEAVVNFRQSLYRALGEVENALSARAQLEAEADERAHALAQAQRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYNP 452 + G + LD ++ + ++A+ QL + + + LY A+G P Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMSLYKALGGEDRP 462 >gi|78066435|ref|YP_369204.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77967180|gb|ABB08560.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 466 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 100/417 (23%), Positives = 197/417 (47%), Gaps = 22/417 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 W F D L+ LV AL N I A+ RI+ A+ + A L PS S A + Sbjct: 49 WPALFGDPQLSALVDAALTHNNDIRAASARIDQAQALLGMHEASLLPSVTVDPSFSRARV 108 Query: 105 SHRF---IP-NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 S +P + N + + + ++IDL+G+ R ++ N+ A A D +L V + Sbjct: 109 SGTVDNALPKRMMHNWSAPVTASYEIDLWGRVRGDVDIERENVLQAIADRDAVRLRVATD 168 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ + ++ ++ +++DL +++ + GA S L ++ A++ + +D+ Sbjct: 169 VASDYLTLHYVEQDLNALTRVIDLRYTALDVISARVRAGAASDLDSLRAAADLDTARADL 228 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDI 278 +++ + ++ L G T + NL +P + G+P+ L+ +RPD+ Sbjct: 229 ADSQRTRENLIDALAILTGVSPTAI------AIDPTAVNLRVPDVPSGLPSALLGHRPDV 282 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTH-WSFGPKLYLPIF 335 E+++ + ++GIA+ P+LSL G A +F N+ WSFG + IF Sbjct: 283 FAAERRVDAASLELGIARKAWLPTLSLTAQGGFASRDLRTFLDRNSSLWSFGLSMAETIF 342 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D GK + + A++ ++ + A++EV++AL +I +K+ + +L A + Sbjct: 343 DGGKRDAAVAAAQAGVTVADANYRSIAIGALREVQDALNNIASEKERIARLDSAARTTEA 402 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + LS+ Y G S L+++D +R + +++ + + V L A+G G+ P Sbjct: 403 AARLSVSRYEHGYVSYLEVIDADRDALNAQRQWIHSRQAYSVATVSLVRALGGGWIP 459 >gi|218551508|ref|YP_002385300.1| outer membrane efflux protein MdtP [Escherichia fergusonii ATCC 35469] gi|218359050|emb|CAQ91710.1| outer membrane factor of efflux pump [Escherichia fergusonii ATCC 35469] gi|324112163|gb|EGC06141.1| NodT family protein efflux transporter [Escherichia fergusonii B253] gi|325499772|gb|EGC97631.1| outer membrane efflux protein MdtP [Escherichia fergusonii ECD227] Length = 485 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 103/477 (21%), Positives = 211/477 (44%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 LL+GC + + + PH L P Q + + +L + +WW FND LN L++ LQ Sbjct: 18 TLLSGCALVRKDSAPHQQLAPEQIKLADDIHLASAGWPQAQWWRQFNDPQLNALIERTLQ 77 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R+ A+ N V A+ F S YA + P+ Sbjct: 78 GSHTLAEAKLRVEKAQSQADLLEAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PH 133 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T + + +DL+G R +E+++ ++A A+ +L++ + + Y Sbjct: 134 LGMDGPYYTEATVGVFAGMDLDLWGAHRSSVEAAIGAQNAALAESSAVELSLTTGVAQLY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + + D+ ++ K G +K+ A+I ++E I ++ Sbjct: 194 YSMQASYQMLDLLEKTRDVIDYAVKAHQSKVASGLEAKVPYHGARAQILAVEKQIAAVKG 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 R ++ L+G A++ +P +N GIP+ +L+ RPD++ Sbjct: 254 QLRETRESLRALMGAGASDL--------PEIKPVALPLVNTGIPSSLSYELLARRPDLQA 305 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D+ F + ++ P L LP+FD Sbjct: 306 MRWYVQASLNQVDAARALFYPSFDIKAFFGLDAIHLDSLFKNTSRQFNVIPGLKLPLFDG 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N ++I + A+ + Sbjct: 366 GRLNANLEGTRATSNMMIERYNQSVLNAVRDVAINGTRLQTLNNQREIQAERVEAIRYTQ 425 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ + + ++QG S L + + E+ L + Q + L ++G GY Sbjct: 426 KAATAA---WKQGLSSRLQATESQLPVLAEEMSLLMLDSQRVVQSIQLIKSLGGGYQ 479 >gi|282880092|ref|ZP_06288812.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella timonensis CRIS 5C-B1] gi|281305965|gb|EFA98005.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella timonensis CRIS 5C-B1] Length = 463 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 130/480 (27%), Positives = 217/480 (45%), Gaps = 55/480 (11%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLK-----W 52 NIL + +L + L GC Y P + T+ + + + L+ DTL W Sbjct: 5 NIL--LIALSAMSLTGCK--SLYGVYERPAVKTEGLVRDVQSPTDTLVVTDTLSFGYMPW 60 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 + F D L K ++ AL NL +L A + + A+ + + + PS + I + Sbjct: 61 RQVFTDVQLQKHIERALANNLDLLNAAQNVKMAEAQLKAAKLSFLPS-FTFAPQGTIASW 119 Query: 113 KTNS---TGQL--DSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 S T QL + W +DLFG Q+R SS L ++ + ++N+IS + Sbjct: 120 DGGSAIKTYQLPIAASWNVDLFGNFLSQKR---SSQVTLLASQDYQKLVRINIISGVANL 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK-LEAEIKSIESDIPTL 222 Y +++I + L K+ E + G + + V+ EA ++E+ L Sbjct: 177 YYTLLMLDRQLAIVDDMHGLTKETREKMKVLMDLGRGIRSTGVQSAEANYYAVEAKRADL 236 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + R + +S L+G PA + K N P + + GI L+ NRPD+ E Sbjct: 237 LRQIRETENALSLLMGQPAQSIVR--GKLENQALPQRF---STGIAVQLLNNRPDVHAAE 291 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---W--SFGPKLYLPIFDK 337 +LA + A+S YPSL+++ + T NS G + W S L PIF + Sbjct: 292 MQLAQCFYNVQTARSRFYPSLTISPTGVFT--NSMGGMEVNPGKWLLSAVGSLVQPIFQQ 349 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 GKI + +R A + ++ Y TWQ ++L A EV NAL S +E KI K +E+ + Sbjct: 350 GKIVAGLRVANAQYEKAYNTWQNSILKAGNEVSNALVLYHSSDEKSKIEAK---QIEVLQ 406 Query: 395 KSMSLSMINYRQGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K++ + + Q + L+++ ++A TAK+ D + K Q + V+LY A+G G Sbjct: 407 KNVEDTKLLLHQSNSTYLEVIIAQQALLNAQTAKIRDDFN--KMQ---AIVNLYQALGGG 461 >gi|257453957|ref|ZP_05619233.1| cation efflux system protein CusC [Enhydrobacter aerosaccus SK60] gi|257448622|gb|EEV23589.1| cation efflux system protein CusC [Enhydrobacter aerosaccus SK60] Length = 553 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 108/467 (23%), Positives = 216/467 (46%), Gaps = 25/467 (5%) Query: 4 LRAIFSLFIVLLAGCTV-----GPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWE 54 L AI + + L A T+ P +PH+ + + N N +I + +W + Sbjct: 33 LTAIVATLLSLTACQTIPKAKTEPVVAQPHIAINQPYETYDNQTVSGTNQPSIASQRWQD 92 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENI-LSVRADLFPS-------SYASISH 106 ++D L +L+++ L N I I A+ + AD+ P+ SY + + Sbjct: 93 FYSDAKLKQLIQLGLDNNKDISATILAIQKARAQYQIQDIADV-PTINSSGSYSYGATNS 151 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 R T + G S ++ D +G+ + +++L N + A D A++++IS + SY+ Sbjct: 152 RDANPSSTYNVGLAMSSYEFDFWGRIASLKDAALQNYLATTAAKDAAQISLISNIAQSYV 211 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++ +A Q L + ++ ++ L+F G S+L+ V+ +A +++ + I + + Sbjct: 212 AYSYNLAQLQLAKQTLATRQDSLRINQLRFKAGLDSQLTSVQAQAAVEAAKVSIAQAQTN 271 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 N + + L+G P L S+ ++ G+P+DL+ RPD+R E L Sbjct: 272 LLTNQNALRYLVGAPVDNSLLPAAGISSITNNRIF---GTGLPSDLLLYRPDLRQAEYNL 328 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKS 342 + A I A++ YP++SL+G++ + + T W FGP + LPIFD G K+ Sbjct: 329 KAAGANINAARAAFYPTISLSGNVGAASSSLGDLFKTGAFSWGFGPSVSLPIFDAGLRKA 388 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N + +E Q+ T+++ + A KEV + + + + ++ ++K + Sbjct: 389 NYQVSEIEQQQALNTYEKAIQTAFKEVNDVFANRATLNQQLAAYNQSLAANQKYYQIVQA 448 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ G + L +LD +R+ + + K+ S + LY +G G Sbjct: 449 RFKAGLDNYLGVLDAQRSIYSSQQSILNTKQSQLLSQIQLYQVLGGG 495 >gi|296157590|ref|ZP_06840425.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295892362|gb|EFG72145.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 521 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 110/465 (23%), Positives = 202/465 (43%), Gaps = 43/465 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C VGP+Y +P +P + ++ D WW + D LN L N Sbjct: 32 CVVGPDYKRPAA-AIPASYKEAAPGWKVAEPADQHDRGDWWTIYEDPQLNALEDRLNTAN 90 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---------------TNST 117 T+ Q A+ + RA FP+ AS N +NS Sbjct: 91 QTVAQFAAAYRQARALVGEARAAYFPTIGASAGATRSGNGSSSSGSSSATTSRSGVSNSF 150 Query: 118 G-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 QLD+ W+ DL+G R + S A A A + A+L+ + L +Y R Sbjct: 151 NVQLDASWEPDLWGSVTRSVNSQKAGQQGAAADLANARLSAQATLAQTYFSLRALDSTQK 210 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ Sbjct: 211 LLDDTVAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQAAAIDNGVQRAQDEHAIAV 270 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G PA+ F S P P + +P+ L+ RPDI E+K A + +IG Sbjct: 271 LVGEPASTF-------SIPPMPLTATPPAVPAQMPSALLERRPDIASAERKAAAANEQIG 323 Query: 294 IAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +A + +PSL+L+ S +NS + W+ GP+L +FD G ++ A Sbjct: 324 VAIAAFFPSLTLSASGGF--ENSVFSQLLTAPSRFWTLGPQLAATLFDAGLRQAQTDAAR 381 Query: 349 SSAQEQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ ++++TVL A ++VE+ L S I E + +V + AV+ ++++++ Y+ Sbjct: 382 AAYDGDVASYRQTVLAAFQDVEDNLASQRILEQEIVVQR--QAVDSARQALAIVTNEYKA 439 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +++L + E L Q S V L A+G G++ Sbjct: 440 GTVGYVNVLTAQTTAFTAEQKLENIAGQRMVSSVGLVKALGGGWD 484 >gi|256424340|ref|YP_003124993.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256039248|gb|ACU62792.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 477 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 224/486 (46%), Gaps = 53/486 (10%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 I R+I L L +A C V T +P ++ GN ++ N ++W E F D +L Sbjct: 6 INRSIGVLGACLAVASCGVPKVATPTENKSVPVAYN-GN-QDTTNTALVQWREFFKDKNL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISH--RFIPNLKTN 115 L+ AL+ N ++ + I A+ +I S +A L P+ + A + R+ + Sbjct: 64 VNLIDTALKNNQELMITLQEIEIARNDIRSRKAQLLPTVGVRAGAGVEKVGRYTSQGAGD 123 Query: 116 STGQLD-----------------SDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLN 155 +T +++ ++W+ D++ + + S A + A V+ N Sbjct: 124 ATTEIEPGKEMPDPLPDFMIGAYANWEADIWSKLHN--SKKAAVTRYLASVEGRNFVLTN 181 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI--- 212 +I+++ SY + ++ I Q ++L K +E+ ++ ++L++ K EAE+ Sbjct: 182 LIAEIANSYYELLALDNQLEIIRQNIELQKNGLEIVKVQKEASRATELAVKKFEAEVLKS 241 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +S+E D+ + + + I+ LLG YP + + NF L +N GIP+ L Sbjct: 242 QSLEYDVL---QQVKETENRINFLLGRYP-----QEIARDKGNFVDVLPAMVNTGIPSQL 293 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY------NTHW 324 + NRPDI+ E +L + + +A+++ YPSL ++ + N+F P Y + + Sbjct: 294 LANRPDIKQAELELTAAKLDVKVARAEFYPSLGISAGVGF---NAFKPSYLFKMPESLLY 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S + P+ ++ IK+ A + + ++ T+LNA EV L++IN +K Sbjct: 351 SLAGDIVAPLINRNAIKAEFSSANARQLQALYNYERTILNAYVEVSTQLSNINNLEKSYD 410 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 V+ +S+ +S ++ R L++L +R +++L K+ + V++Y Sbjct: 411 LKSKQVDALTRSIDVSNDLFKSARADYLEVLLTQRDALDAKLELVETKKSQLNAVVNIYR 470 Query: 445 AIGSGY 450 +G G+ Sbjct: 471 NLGGGW 476 >gi|198275257|ref|ZP_03207788.1| hypothetical protein BACPLE_01416 [Bacteroides plebeius DSM 17135] gi|198271840|gb|EDY96110.1| hypothetical protein BACPLE_01416 [Bacteroides plebeius DSM 17135] Length = 458 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 207/465 (44%), Gaps = 36/465 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPH------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 + + +L GC + +Y +P LP + +S + LKW E F D S Sbjct: 10 VAACMASMLTGCGIYTKYRQPETNTDGLFGALPEEVDTTSS-----LADLKWEELFTDAS 64 Query: 61 LNKLVKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 L KL+ AL+ N L + +A ++AAK+ L A L P S P K Sbjct: 65 LQKLITRALEANTDLNVARLKVEEARASLSAAKQAYLP-SAQLDPEGALSSFDGSKPT-K 122 Query: 114 TNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T S G + W++D FG+ + + A L+ + A + + +I+ + SY E Sbjct: 123 TYSLGA-SASWELDFFGKLTNAKRGERAALEQSEAYRQVVQTQLIATVAESYYTLLMLDE 181 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++++ + ++ +K+ I G + ++ + EA E+ + L++ + Sbjct: 182 QVAVTTETVESWKEYIRSLKALMRAGQADRATVNQAEASRLDAEASLLDLKQQVTETENT 241 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVA 290 + LL + Q + + P +++G+P +L+ NRPD+ E L + Sbjct: 242 LCALLFWTP-------QPIARGTLGEVDFPESLSVGVPLNLLANRPDVWQAEAVLKQAFY 294 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+S YPS++L+GS T+ PG + G L P+F +G++ +N++ Sbjct: 295 ATNQARSSFYPSVTLSGSAGWTNSGGALVTNPGAWLLQAVG-SLVQPLFQRGQLMANLKI 353 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ +E + +Q+T+L+A EV NAL+ ++ + VE K ++ + + Sbjct: 354 SKAQQEEALLQFQQTLLDAGAEVNNALSQWQTARQKTVLDREQVEHLKDALRDTELLMEH 413 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++L ++ + L + KS + LY A+G G N Sbjct: 414 GTTNYLEVLTARQSLLAARLSLVSDRNAEIKSVITLYHALGGGNN 458 >gi|254418065|ref|ZP_05031789.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Brevundimonas sp. BAL3] gi|196184242|gb|EDX79218.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Brevundimonas sp. BAL3] Length = 461 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 200/467 (42%), Gaps = 40/467 (8%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I ++++GC TVGP + + ++ ++ WW +F D +L V Sbjct: 7 IVGASALVMSGCATVGPTQAPVETAVAAPESWRAETQAGSAVEA-GWWSAFGDAALTAAV 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ------ 119 + AL +N I A R+ A+ R+ L PS S++ + L N+ GQ Sbjct: 66 EEALARNTDIAVAESRVREAEAFAAQSRSALSPSLTGSVAAQEAREL--NAFGQAAEAAL 123 Query: 120 ----LDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDARHFKERI 174 L ++IDL+G+ R +++ A D A L+V +Y+ ++ Sbjct: 124 AQPQLQVAYEIDLWGRLRSADAAARASLQASRFSRDAAALSVAGATARAYVALVALDAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L + + L+ + G TS+L L + EAE ++ IP LE + R + + Sbjct: 184 EVASRTLVSREDAVTLARRRAEAGQTSRLELTQAEAEFQAAAQRIPALELAIRRQENALR 243 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G P F + G+P+ L+ RPDI E +L + A Sbjct: 244 LLTGALPGP-------SARGRFDALILPDPEPGLPSSLLVRRPDIAQAEAQLVAADASFA 296 Query: 294 IAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +++ L P + L+ S+A L + P T WS G + P+FD G++ + +E+ Sbjct: 297 SSRAALLPQVRLSASLAELFVEGLDP--VTIWSAGGSVLAPLFDGGRLTAQADASEARRD 354 Query: 353 EQYITWQETVLNAIKEVENALTSINE-----DKKIVTKLQ--HAVELHKKSMSLSMINYR 405 + + ++ VL A EVENA+ ++ D+ +L AV H ++ YR Sbjct: 355 QAALAYRRVVLRAFSEVENAMEGVDRLQAQADRAEAQRLALNEAV-FHARN------RYR 407 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S L+ LD +R E L + + V LY A+G G+ P Sbjct: 408 AGYTSYLEELDAQRGLLTAETALIQLREMQMTNAVALYQALGGGWTP 454 >gi|167620102|ref|ZP_02388733.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 357 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 166/335 (49%), Gaps = 10/335 (2%) Query: 122 SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S ++IDLFG+ + + +++LA +A AQ A++++I+++ +Y+ R +++ +A + Sbjct: 17 SAFEIDLFGRVKSLSDAALAEYFATAEAQ-RAARVSLIAEVASAYVRERALVDQLKLAER 75 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L L+ ++ G ++ + L E + S + LE+ + L G Sbjct: 76 TLAARDATYALTQRRYAAGTSTAIELRTAEMLVASARASKAALEREHTQAASALKLLAG- 134 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 +F + + ++ G+ +DL+ RPDIR E++L + A IG A++ Sbjct: 135 ---DFTAALPADAPALDELAVARVSPGLSSDLLEQRPDIRQAEQRLVAANANIGAARAAF 191 Query: 300 YPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P ++L GS++ F ++ W+F P+L LPIF G+ ++N+ A++ Sbjct: 192 FPRIALTTDIGSVSDAFSGLFSAGSSVWTFAPRLTLPIFAGGRNRANLDVADARKHIAVA 251 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++T+ A +EV +AL + ++ + Q + + L+ Y G S L++LD Sbjct: 252 EYEKTIQTAFREVADALAARDQIDAQLAAQQAVYGADAERLRLAERRYGSGVASYLELLD 311 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+T + +L K+ + + LY A+G G++ Sbjct: 312 AQRSTFESGQELIRLKQLRLTNAITLYRALGGGWS 346 >gi|224367362|ref|YP_002601525.1| outer membrane efflux protein [Desulfobacterium autotrophicum HRM2] gi|223690078|gb|ACN13361.1| outer membrane efflux protein [Desulfobacterium autotrophicum HRM2] Length = 420 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 100/417 (23%), Positives = 198/417 (47%), Gaps = 29/417 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW+SF + LN+++ AL N TI +A R++ A+ + R+ L P + A SH+ Sbjct: 7 WWKSFGSSELNRIIDQALGSNFTIREALARLDQARAMSMETRSLLLPVITLEAGASHK-- 64 Query: 110 PNLKTNSTGQ---LDS-------DWKIDLFGQRRHIESSLANLDSAYAQ---VDIAKLNV 156 +T S GQ LD+ +++DL+G+ R ++A SA A ++ A + + Sbjct: 65 ---RTRSQGQESTLDTIALGPAASYEMDLWGEIRS--RTMAGDLSARASRSDLETAAMTL 119 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +++D + + + Q L +EL L+F ++ L +++ + + + Sbjct: 120 TAEVSNTWVDQLAAVKALDLVKQQLATNTLLLELLELRFENALSTSLDILQQQEAVAHVT 179 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + IP LE+ + + + L G P T L + N P L +GIPADL+ RP Sbjct: 180 AQIPPLEQEIKRLSNRLCLLQGKPPTNALAVI----NTDFPILTPLPAMGIPADLLSKRP 235 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPI 334 DI+ +L + ++ PSL+L G++ L +N+ W S G + + Sbjct: 236 DIQAAGFRLMADQWESRAEQAARLPSLNLTGTMGLQSSGLDALFNS-WILSLGANMAATV 294 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK + +A++ E ++ TV A+ EVE+AL+ + + L ++ + Sbjct: 295 FDGGKKAAAREQAKAVVAEGLAYYERTVFTALVEVEDALSEEVHQRAWLAALNQELDAAR 354 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G + L ++ + +E + + + +L K+ + LY ++G + Sbjct: 355 LALGEATRRYQRGIITFLPLISEQLNVQNLEKGIILQQAELIKARIALYRSLGGSFT 411 >gi|162147081|ref|YP_001601542.1| outer membrane protein oprM [Gluconacetobacter diazotrophicus PAl 5] gi|209544142|ref|YP_002276371.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161785658|emb|CAP55229.1| putative Outer membrane protein oprM [Gluconacetobacter diazotrophicus PAl 5] gi|209531819|gb|ACI51756.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 500 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 100/486 (20%), Positives = 219/486 (45%), Gaps = 55/486 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 L + L+GCT+ P+Y +P +P+ + + G++ + + L W + F D L Sbjct: 13 LVLAALSGCTLIPDYKRPALPVAASWPKGEAYHAGSTGQIGTAASDLGWRDFFVDPRLQA 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIP 110 L+ +A++ N + + A+ A LFP S +S F P Sbjct: 73 LIALAVRDNRDLRSVASAVIEAQGQYRVQHASLFPQIGGTGMALYQAPSGNGGLS--FAP 130 Query: 111 NLKTNSTGQLDSD---------------WKIDLFGQRRHIESSLANLDSAYAQVDIAK-- 153 L G+ S+ ++IDLFG+ R + + D +Q A+ Sbjct: 131 GLDAGKHGEYYSNGHVFKYYSGGIGFSSYEIDLFGRIRSLSREAS--DQVLSQAANARGL 188 Query: 154 -LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++VIS++ +Y+ +E++ + + L + + L+ +F +G T +L+L ++E ++ Sbjct: 189 LISVISQVATTYVAWLADREQLQVTERTLASQQDTLRLTQARFDRGETDQLTLRQVETQV 248 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + + + + + L+G P L + + + + G+P+DL+ Sbjct: 249 EQAAAYRAQYLRQIAQDENELVMLVGAPLPANLP---DPAPFGRQTVLADLPAGLPSDLL 305 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK 329 RPD+ E L + IG A++ +P L L +G +L N F T W P+ Sbjct: 306 DRRPDVVSAEFALLSANDDIGAARAAFFPRLILTASDGVSSLQFRNLFTSGATTWGANPQ 365 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL----TSINEDKKIVTK 385 L +P+ G+ + +++ ++S ++ + +++ + A EV +AL T +++ +++ Sbjct: 366 LQIPLLTWGQNEGSLQVSKSRRDQRLMAYEKAIQTAFHEVSDALAARATYLDQSRQLDAL 425 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + ++ L+ + + G S L+ L+ +RA + +L + + ++ + +Y A Sbjct: 426 VGSSADAYR----LARMRFDAGVDSYLNTLEAQRALYTAQQNLIVVQEARYQNLITVYRA 481 Query: 446 IGSGYN 451 +G G+ Sbjct: 482 LGGGWT 487 >gi|251792543|ref|YP_003007269.1| TolC protein [Aggregatibacter aphrophilus NJ8700] gi|247533936|gb|ACS97182.1| TolC protein [Aggregatibacter aphrophilus NJ8700] Length = 470 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 113/481 (23%), Positives = 223/481 (46%), Gaps = 59/481 (12%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLN 62 + ++FI L GCT + + +P QF + S+N + I +WW++++D L Sbjct: 10 LIAMFIAL-TGCTTNVDLSSKVE--VPVQFEQTQNAATSQNAMEIS--RWWQNWHDPQLT 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNST- 117 +L++ L+ NL I A R+ A+ +ADL P A + H + N T+ + Sbjct: 65 QLIEQGLKNNLDIEIAKARLLEAQAMGQYTQADLGPKVGAQGTAGLMHTHVENPLTHRSY 124 Query: 118 --------GQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + W++D FG++R +++ A QV ++ V ++ SY + Sbjct: 125 DREGNIQLAGISASWELDFFGKKRSDRDAAQAAALGVQQQVYATQMLVTGQIAESYAN-- 182 Query: 169 HFKERISIAHQILDLYKKNIELSHL---------KFTQGATSKLSLVKLEAEIKSIESDI 219 I+ Q DL K+ + HL +F G + +++++E++I ++++ + Sbjct: 183 -----IAALRQQKDLLKQ--QEKHLLQLKRYVQGRFGAGQVNSNNVLQIESQISAVQAQL 235 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 T + N I+ L+G P F ++ K + +F L +P D++ RPD+R Sbjct: 236 ATFDAQISGNERAIAVLIGKPPQGF--HITKSAVDFLGVLPSAPQGVLPGDILERRPDLR 293 Query: 280 YQEKKLADSVAKIGIAKSDLYPS-----LSLNGSIALTHDNSFPGYNTHWS--FGPKLYL 332 + ++ AK+ AK+DLYP L G I + D P W+ + + Sbjct: 294 AYKAQVQAHAAKLASAKADLYPHFDIQFLGQTGRININTD--IPDLKG-WANLLNVNINI 350 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHA 389 PIF G+I++NI A++ + + + +T+L A+ +V+N A ++N ++ H Sbjct: 351 PIFTNGRIQANIDAADARLKTALLQYDKTLLQALADVDNSYQAQAALNRQTYLLQTAYHQ 410 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ K++ + + ++ G +L + L + L ++ AK+ ++LY A+G G Sbjct: 411 VQ--KQAGNAEKL-FQYGEKTLDNALTARLTALDYKNRLVQSRLAGAKNLINLYKALGGG 467 Query: 450 Y 450 + Sbjct: 468 W 468 >gi|118580620|ref|YP_901870.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118503330|gb|ABK99812.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 471 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 105/465 (22%), Positives = 221/465 (47%), Gaps = 39/465 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTSLNKL 64 LL C+VGP+Y +P ++P F + ++ N WW + D LN L Sbjct: 9 MATLLLACSVGPDYVRP-TAVVPAAFGESAPWRVAQPRD--NAQRGPWWHIYEDPRLNGL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKTNSTGQL 120 ++ N ++ A + A+ + + R+ P + S + N + ST L Sbjct: 66 MEQVTLSNQSLKAAEAQFRQARALVQAARSGYHPQLHGGASLDRSRSYSKNSGSTSTTYL 125 Query: 121 ---DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 D+ W++DL+G+ RR +E+S A ++ A ++ +L++ ++L+ Y R + + Sbjct: 126 LSADASWELDLWGRVRRDVEASRAEAQASAADLESLRLSIQAELVGDYFQLRTIDAQKRL 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + Y++ +EL+ + G S +++ E ++++ ++ L H I+ L Sbjct: 186 LDETVSSYEQYLELTRNRHAAGVASPADVLQAETQLRNSQAQAIDLGVERAQREHAIALL 245 Query: 237 LGYPATEFLHYMQKQSNNFQP----NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +G EF P ++ P G+P+ L+ RPDI E+++A + A+I Sbjct: 246 IGRAPAEF---------TLTPIPLDSIPPPSPPGLPSRLLERRPDIAAAERRVAAANARI 296 Query: 293 GIAKSDLYPSLS-----LNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G+A + +P+++ S +L++ S+PG+ W+ G + ++D G + + A Sbjct: 297 GVATAAYFPAITLSSSAGFASSSLSNWLSWPGHV--WALGSAIAQTVYDGGLRGAQVDEA 354 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + +++TVL A +EVE+ L ++ ++ A+ ++S+ ++ YR G Sbjct: 355 RATHEATVANYRQTVLTAFQEVEDNLAALRILEQEAAVQDQALRAARQSLVITTNQYRAG 414 Query: 408 RYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 L+++ + ++E D + + R++A S V+L IG G++ Sbjct: 415 IVGYLNVIVAQTTALELERDSIDLMGRRMAAS-VNLVKGIGGGWD 458 >gi|326386037|ref|ZP_08207661.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] gi|326209262|gb|EGD60055.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] Length = 485 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 95/423 (22%), Positives = 190/423 (44%), Gaps = 29/423 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQ 70 LAGC+ P Y +P P F G +D WW + D L+ L Sbjct: 23 LAGCSGAPSY-RPVAVATPPAFREDGPWAEAAPVDPALGRDWWRALGDPQLDALEARLET 81 Query: 71 QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN---LKTNS--------T 117 + T+ A R A + + AD P+ + +++++ + L+ +S T Sbjct: 82 DSPTLAVALARREEANAALRTALADRLPTIGTGSTLTYDRQSDDRPLRGSSQESEYGANT 141 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q +++DL+G+ R + + AN ++ V+ +L++ + L YI R + Sbjct: 142 LQGSISYEVDLWGRVRSEVAAGRANAQASIDDVEAIRLSLQADLASLYIALRGLDAETEL 201 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +D Y + + +F G + + + A++ ++ + + + H I++L Sbjct: 202 LTGTVDAYAQADAVVRARFRGGVATGIDTGRSGAQLADAQAQLADVRATRARVEHAIASL 261 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G PA+ F + + + + +G+P+ L++ RPD+ E+++ + IG+AK Sbjct: 262 VGTPASAF--SLPQVTGTLH---LAAMPVGLPSTLLQRRPDVAAAERRVYAANRSIGVAK 316 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P ++L T+ + G N W+ GP + L +FD G+ + +R A + Sbjct: 317 AAFFPLVNLG-GTGGTNATTLAGLVASPNAFWALGPTIALTVFDGGRRHAALRTARAKWA 375 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E T++ T L A +EVE++L+S++ A +++ LSMI Y +G + L Sbjct: 376 EASATYRGTALKAFQEVEDSLSSLHHYGDEENAETRAASEAQQAADLSMIRYTKGAATYL 435 Query: 413 DIL 415 D++ Sbjct: 436 DVV 438 >gi|298368552|ref|ZP_06979870.1| TolC protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282555|gb|EFI24042.1| TolC protein [Neisseria sp. oral taxon 014 str. F0314] Length = 471 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 209/481 (43%), Gaps = 58/481 (12%) Query: 15 LAGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LA C T P ++ +P TQ + +K +I T WW+ +ND L+ L+ L Q Sbjct: 3 LAACKNTEVPLNSQVQLPQAFTQDAA--AKGDADIGT--WWQQWNDPVLSGLIAQGLAQG 58 Query: 73 LTILQATERINAAKENILSVRADLFPS------------------------------SYA 102 + A R+N A+ + RADL P+ + Sbjct: 59 HDVKIAVSRLNEARAVAGAARADLGPTVGLSGKVGANYSKMDNPLDSNARALLSRYPQAS 118 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-----SSLANLDSAYAQVDIAKLNVI 157 S++ I + T+ G L + W+ D+FG++R ++L + AY A++ V Sbjct: 119 SLNGDTIESTGTSMYGGLTASWEPDIFGKKRSDADAARYAALGQQELAYG----AQMLVA 174 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y AR + R+ A Q + ++ + +F G S + + + ++ + E+ Sbjct: 175 GDIADNYFKARAAQGRLKTADQTVATLRRMVRYIEGRFKAGHVSGYEVNEAKVQLTAAEA 234 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 T+ + V +I+ L G P T L QP+ P P L+ RP Sbjct: 235 KRATIGAEYAAYVRSIAVLTGNVPQTFTLPESSADVLARQPS--APGGQ-TPQGLLERRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLY 331 D+R Q ++ AK AK+DL P ++ G I + D S G+ + S G + Sbjct: 292 DLRAQAAQVNAYAAKFASAKADLLPRFTISFMGQGGRIGVDGDRSLTGWASLLSVG--IQ 349 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+F G+IK+NI+ A++ Q + + + +L A+ EV++A + + LQ A Sbjct: 350 MPLFTNGRIKANIKAADARLQTALLEYDKRLLTALGEVDSAYQGVESLSRQTELLQTAHN 409 Query: 392 LHKKSMSLSMINYRQGRYSLLDI-LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + +R G Y LD+ L A +++ +L A+ + V LY A+G G+ Sbjct: 410 QAARHAADTEKMFRNG-YKTLDVALKAHIAEGQMQENLISARLARVQMLVSLYKALGGGW 468 Query: 451 N 451 + Sbjct: 469 S 469 >gi|148259113|ref|YP_001233240.1| RND efflux system outer membrane lipoprotein [Acidiphilium cryptum JF-5] gi|146400794|gb|ABQ29321.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidiphilium cryptum JF-5] Length = 557 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 102/477 (21%), Positives = 198/477 (41%), Gaps = 42/477 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLL-------------PTQFSIGNSKNLINIDTL--KWWE 54 L LLAGC VGP Y +P P L T + G +++L+ + +WW Sbjct: 69 LGTTLLAGCAVGPNYHQPAAPKLHSYTTSRLPNSTASTSGAGGTAQHLVIGQKIAGEWWT 128 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLK 113 ++ L+ L++ AL N ++ A + AA++ + FPS S + R L Sbjct: 129 LYHSKPLDTLIRKALANNPSLKSAQYTLLAARDTARAAEGGFFPSISGSFQAERVRSGLG 188 Query: 114 TNSTGQLDSD-------------WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 T G + + D+FG RR +ES A + ++ L++ + Sbjct: 189 TTGLGSAGAGLTYSLRNASVAVSYAPDVFGGTRRQVESLHAQAEQQRFALEATYLSLTAN 248 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + + +I +I+ K +++ + G + + + ++ E+ + Sbjct: 249 IVTASVTEASLTAQIEATERIIRAEKGLLDILDRQVALGGIPETNAITQRTQLAQTEATL 308 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRNRP 276 P L K ++ G P + F + +F +L +P + + +P+ L+R RP Sbjct: 309 PPLRKQLAQTRDQLAAYEGVPPSRF------HAADFTLADLALPESLPVSLPSALVRQRP 362 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLP 333 DIR L A++G+A +++ P ++L+ I AL F W+ + P Sbjct: 363 DIREAAAVLHQDTAQVGVATANMLPQITLSAGIGHEALDGQALFAPQTLLWNLAAGITQP 422 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 F+ G + R A ++ + T++ TV+ A + V +AL +++ D + A Sbjct: 423 FFEGGTLFYKRRAAVATMKAAAETYENTVVLAFQNVADALEALHYDAIALAADTAAEHDA 482 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++S++L +R G +L E+ + A Q L+ A+G G+ Sbjct: 483 QRSLNLIERQFRLGGVPYTSVLTAEQTYESAVITRIKATAQRYADTAALFQALGGGW 539 >gi|325953867|ref|YP_004237527.1| RND efflux system, outer membrane lipoprotein, NodT family [Weeksella virosa DSM 16922] gi|323436485|gb|ADX66949.1| RND efflux system, outer membrane lipoprotein, NodT family [Weeksella virosa DSM 16922] Length = 468 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 118/475 (24%), Positives = 213/475 (44%), Gaps = 48/475 (10%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSL 61 +L IFSL C V EY +P + K+ I + W E F D SL Sbjct: 12 VLVGIFSL-----QSCFVAKEYNRPQEITTEAYYRTDELVKDSTTIAKVSWKEVFTDASL 66 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 L+ L NL I A + I A+ + RA FP+ + +S G+ Sbjct: 67 QSLIDKGLSNNLDIRNAMQNIRIAEAYMKQGRAQYFPTFSVGPKFTLTESSANSSMGRFT 126 Query: 122 S-------------DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 W++D++G+ +R E++ +A+ V K ++IS + +Y Sbjct: 127 GKQTQRQYELSGAMSWELDIWGRIKSNQRATEATFLQTLAAHQAV---KTSIISMIANAY 183 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 E+ IA + + +++E + G +++++ + EA++ S ES + + + Sbjct: 184 YQLLALDEQKKIAQEAIVNRTQSLETTKALKDAGQVTEVAVNQTEAQLLSAESLLLDINR 243 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R+ + IS +LG +TE + + S + Q + + IG+PA ++ NRPD++ E Sbjct: 244 QIRLQENYISYILGESSTE----INRSSLDSQV-INTTLAIGVPAQILENRPDVKAAEFG 298 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA++ + A+++ YP L+++ S + D F + + L PI ++ +IK Sbjct: 299 LANAFHLVNAAEANFYPRLTIDASGGVQGIELDKLFDHQSLFANVLAGLTQPILNRRQIK 358 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKK-SMSL 399 + A ++ + +++ +L A KEV +A+ + KKI K Q + L S S Sbjct: 359 TQKEVALVQQEQALLKYKQAILLASKEVSDAMYQYDAASKKIDLKQQESTVLKSAVSNSE 418 Query: 400 SMINYRQGRYSLLDILDIERATAK---VEVDLSIAKRQLAK--SYVDLYIAIGSG 449 ++NY Y +E TA+ + DL + +LAK S V+LY A+G G Sbjct: 419 ELLNYGMANY-------LEVITARDSALNADLGLVNIKLAKLQSLVELYRALGGG 466 >gi|254445258|ref|ZP_05058734.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] gi|198259566|gb|EDY83874.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] Length = 453 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 116/457 (25%), Positives = 221/457 (48%), Gaps = 46/457 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC +++ LP+ F + L D+L E F + L+++V+ AL N +L Sbjct: 18 GCQSTTRWSEQETIELPSSFQQADDPQLEIKDSL--LELFANPQLDQVVEAALDNNPDLL 75 Query: 77 QATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNST----GQLDSDWKIDLFGQ 131 +A R+ ++ ++ L P A S R T+ST +LD+ W++D++G+ Sbjct: 76 RAQARLEEVGFSLTRAKSSLLPKLSAGASAIRSEAVGATSSTDTFSAELDASWEVDIWGK 135 Query: 132 -RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI-- 188 R + +S A+L +A A A+ +++ + + ++ + A +ILDL ++ + Sbjct: 136 VRSSVRASKADLAAAEADFQAAQQSLVGQTMQAWF-------ALVAAEKILDLDQRRVTS 188 Query: 189 -----ELSHLKFTQGATSKLSLVKL-EAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +L +F G T+ LS + L + ++++ +D+ + + + T+LG YP+ Sbjct: 189 FESTEKLVSRRFDLG-TATLSELNLSQTDLQNARADLESSADAKNRAARRLQTILGSYPS 247 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR--YQEKKLADSVAKIGIAKSDL 299 ++ + P L + GIP+ L+ RPD+ YQ + AD A++ + +++L Sbjct: 248 DQYEAKLD------WPELNASLAAGIPSQLLTARPDVAAAYQRVRAAD--ARVTVTQTEL 299 Query: 300 YPS--LSLNGSIALTH-----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +PS L+ NG A D++F WS L + +FD G +S+I A A+ Sbjct: 300 FPSFRLTANGGRAGPELENLSDSAF----NSWSAIASLAVTLFDAGARRSDIGAANKRAE 355 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + Y +Q VLNA++EVE+A+ S + + A++ ++S++ S +Y G S+L Sbjct: 356 QAYYNYQTVVLNALREVEDAIGSEYYLAREESARLAALDAARRSLNRSQRDYETGLISIL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +L+ +R E + K + V L +A+G G Sbjct: 416 SLLETQRRVFTTERQVINLKASRLNNRVSLALALGKG 452 >gi|167572417|ref|ZP_02365291.1| outer membrane efflux protein [Burkholderia oklahomensis C6786] Length = 463 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 89/381 (23%), Positives = 174/381 (45%), Gaps = 20/381 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNK 63 A F+ LL+GC T P LP Q++ + + D WW F D +L++ Sbjct: 14 ATFACACALLSGCATRSRDTPPPSVSLPEQWASPVAAQASAAPDD---WWRRFGDPTLDR 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS- 122 L+ AL+ N + A R+ A+ +L P+ + L T+ G+ Sbjct: 71 LIDEALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNVSRTLDTHRMGRTSGI 130 Query: 123 ----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DL+G+ +++ L++ A D A+L++I Y + ++I++ Sbjct: 131 TATLGYELDLWGRLAAQRDAARWALEATQADRDAARLSLIGTTAALYWQVAYLNQQIALG 190 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + ++ ++L + GATS L + + E + ++ +D L + N + ++ L Sbjct: 191 DANIAYAERTLKLVRSRHAAGATSGLDVAQAERNLSALRADQTQLIQQRAENRNALAILF 250 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P Q P+ +P + G+PA+L+ RPD+R E +L +S+A + + + Sbjct: 251 DRPPQR-----QAAERGALPDAPLPEVAAGLPAELLGRRPDLRAAEFRLRESLANVDVTR 305 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + YP+ +L GS+ T S N + G L LP ++ I+ ++S +E Sbjct: 306 TSFYPTFTLTGSVG-TSSTSLERVLQNPVATLGLGLTLPFIQWNTMQLQIKVSKSQYEEA 364 Query: 355 YITWQETVLNAIKEVENALTS 375 + +++ + A+ EVENAL++ Sbjct: 365 VVNFRQNLYRALGEVENALSA 385 >gi|118579204|ref|YP_900454.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118501914|gb|ABK98396.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 480 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 99/483 (20%), Positives = 214/483 (44%), Gaps = 74/483 (15%) Query: 20 VGPEYTKPHM--------PLLP-----TQFSIGNSKNLINIDTL--KWWESFNDTSLNKL 64 +GP++ +P P LP + G ++ ++ L +WW F + L++L Sbjct: 1 MGPDFRRPEQALPVGYTAPALPKVHPAVGGAAGETQAVVPGRDLPAQWWRLFRNAELDRL 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLF-PSSYASISHRFIPNLKTNSTGQLDSD 123 ++ AL + T+ A + A+EN+ + ++ P+ AS+S + + ++GQ + Sbjct: 61 IRQALDDSPTLAAAGAALRQAEENLRARSGAVYYPALDASLSG-ARQKVSSAASGQPGTG 119 Query: 124 --------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + +DLFG RR +E + +D Q++ A L++ + ++ + + Sbjct: 120 GFTYGLYNASLVLSYDLDLFGGGRRELEELRSQVDYQRFQLEAAHLSLTANIVTTVVREA 179 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + +++ ++L + ++ +L + G T+++ L+ E+++ + + +P LEK Sbjct: 180 SLRAQLATTREMLAVQEQLRDLVARQLQLGGTTRVELLSQESQVAQLRASLPLLEKE--- 236 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP------------------AD 270 L + + Y + P G+P + Sbjct: 237 --------LAWTRNQLAQYCAR----------FPSQAGLPEFSLDQLLLPPELPLSLPSS 278 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L R RPDIR E+ L + A+IG+A ++LYP ++L+G + A T + WS G Sbjct: 279 LARQRPDIRAAEELLHAASARIGVATANLYPQITLSGGVGTQAATLGKLLSSGSPIWSLG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L P+F G++ + R A ++ + ++ET+L + + V + L +++ D + Sbjct: 339 AGLLQPLFRGGELTARRRAAIAAYDQATAQYRETILKSFQSVADVLQALDSDATALVAQA 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + +++++L+ Y G + L +L+ +R + + L A+ L+ A+G Sbjct: 399 ESERTARETLTLTRRQYEIGATNYLLLLNAQRQQQQASIALIQARAARLADSAALFQALG 458 Query: 448 SGY 450 G+ Sbjct: 459 GGW 461 >gi|288937384|ref|YP_003441443.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] gi|288892093|gb|ADC60411.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] Length = 461 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 106/462 (22%), Positives = 218/462 (47%), Gaps = 37/462 (8%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES-----FNDTSLNKLV 65 I L GC ++ P+Y +P P+ P QFS+ S+N + T + E+ F D + L+ Sbjct: 12 IFALTGCLSLAPDYQRPAAPV-PQQFSL--SQNRLVTATAGYQETGWRTFFVDPQVKSLI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQ 119 AL N + AT ++ A+ AD P S + LK ++T Sbjct: 69 STALANNRDLRMATLKVQEARAQYQVTDADRSPQLNGDGSTTYGGKLKGDTTTSSDYAAG 128 Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L+ + +D FG+ +++ E+ N ++ + +I+ + SY + R ++ +A+ Sbjct: 129 LNLSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANVSQSYFNQRLAAAQLQVAN 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L Y+++ + G+T+ L+L + I+S +DI + + + LLG Sbjct: 189 DTLQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIAKRQGQLAQANNALQLLLG 248 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + H ++ + + + ++++ RPDI E L + A IG A++ Sbjct: 249 ----SYQHLPDDSPSSAVDLKGVTLPPSLSSEILLQRPDILEAEHSLRAANANIGAARAA 304 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P+++L S++ + +N W+F PK+ LPIF+ G+ ++N+ AE Q+Q Sbjct: 305 FFPAITLTSSLSGSSSELSSLFNAGSAMWNFIPKIELPIFNAGRNQANLDLAEIRQQQQV 364 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN----YRQGRYSL 411 + +++ + +A KEV +AL ++ + A E + S+++++ YR G S Sbjct: 365 VNYEQKIQSAFKEVADALAL----RQSLADQIAAQERYLASLNITLQRATALYRHGAVSY 420 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++L +R T + ++L+ +++ + + L+ A+G G+ Sbjct: 421 IEVLSAQRDIFTTRQTLLELNYSRQ---ANEITLFTALGGGW 459 >gi|237799826|ref|ZP_04588287.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806371|ref|ZP_04593075.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022681|gb|EGI02738.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027484|gb|EGI07539.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 488 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 102/474 (21%), Positives = 205/474 (43%), Gaps = 34/474 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFND 58 L+ + SL + L+ +G KPH LLP T +I ++ T +WW ++ D Sbjct: 9 LKPLGSLALTLIVSGCIGTHGIKPHERLLPAATLATDQAIQHAALDARWPTAQWWRAYGD 68 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNS 116 L++ V++A + ++ A R+ AK I L S AS+ PN + Sbjct: 69 AQLDRWVELATLGSPSLAMAAARVRQAKAMAGIAESDESLHIQSNASLQRHDWPNDQFYG 128 Query: 117 TGQLDS------------DWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLI 161 G L + +D++G R +S LD A+ ++ A+L + ++ Sbjct: 129 PGALADTRTWDNNASLGLSYSLDIWG--REQNASERALDMAHVSAVELRQAQLELQENIV 186 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +YI R+ IA LD ++ +EL+ + G + + + E + I Sbjct: 187 RAYIQLALNYARLDIAKAALDQQQQILELAQRRLKGGLGTHFDVSQAETSLPEAHRQIDA 246 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+++ +N + ++ L G +Q+ + + L +P +PA+L+ RPD+ Sbjct: 247 LQEAIALNRNQLAALAG-KGPGLGAGLQRPALSLHSALSLPS--ALPAELLGQRPDVVAA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFD 336 ++ I +A++ YP + L GS++ G + GP + LPIFD Sbjct: 304 RWQVEAQTRGIDVARAGFYPDIDLVGSLSFMATGGGMLEFLTGSKLGYKVGPAISLPIFD 363 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++++ + A + + +T++ A++ + + L K +V +K+ Sbjct: 364 GGRLRAELGEASAGYDLAVARYNQTLVTALQSISDQLIRRASMGKQQVFAARSVASAQKT 423 Query: 397 MSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++I +++G L++L+ R + E+ + +L +Y L +A+G G Sbjct: 424 YDIALIAWQRGLTDYLNVLNARTRLFHQQEIQQQVEAARL-NAYAGLVVALGGG 476 >gi|148926457|ref|ZP_01810140.1| putative outer membrane channel protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205355984|ref|ZP_03222752.1| putative outer membrane channel protein [Campylobacter jejuni subsp. jejuni CG8421] gi|145844620|gb|EDK21726.1| putative outer membrane channel protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205346108|gb|EDZ32743.1| putative outer membrane channel protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 492 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNTPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKETYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|320353438|ref|YP_004194777.1| NodT family RND efflux system, outer membrane lipoprotein [Desulfobulbus propionicus DSM 2032] gi|320121940|gb|ADW17486.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobulbus propionicus DSM 2032] Length = 475 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 109/471 (23%), Positives = 217/471 (46%), Gaps = 42/471 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLL---------PTQFSIGNSKNLINIDTLKWWESFNDTS 60 L L GCT+ PEY +P +P+ P + N +++ + L W E F D Sbjct: 13 LMAGALGGCTLAPEYRRPELPVADALPVGQQSPISPASANGAAVLSAE-LAWREYFADPR 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA----------SISHRFIP 110 L +L+ +AL N + + + A + R+ LFPS S S Sbjct: 72 LQQLLTLALANNRDLRASALNVEAYQAQYRIQRSALFPSISGEGSGTKQRTLSGSSYVTS 131 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSYIDA 167 + T S G + +++DL+G+ R+++ L+ A + A+L +++++ +Y+ Sbjct: 132 EIYTVSVGM--TAYELDLYGRVRNLKDQ--ALEQYLAMEETHRSARLGLVAEVARAYLTW 187 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +E ++ L + +++ +L + +G ++L L + +++ ++ ++ Sbjct: 188 LADRELLTTTEDTLRVEEESFQLIEQREREGIATQLDLAQARTSLETARANRSLYQRMVA 247 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +++N+ L+G P + L N +P + P+ L+ RPDI E +L Sbjct: 248 QDINNLVLLVGTPLSPSLFKDAAPLNAQAIGARLPAQL--PSSLLLQRPDIMAAEHELKG 305 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A IG A++ +PS+SL G+I+ + F G + W F P + LPIF G++++ + Sbjct: 306 ANANIGAARAAFFPSISLTAKTGAISGDLSDLFDGDSGSWLFSPSINLPIFTAGRLRAEL 365 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ +++ + A +E + L + + V + + +++ +L+ Y Sbjct: 366 DVAKIRKDITVAQYEKAIQTAFREAADTLVASGTFVQQVAAQKANLAANQEYHTLAKARY 425 Query: 405 RQGRYSLLDILDIERA--TAK---VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +QG S L +LD +R+ +A+ + V LS Q VDLY A+G G+ Sbjct: 426 QQGLDSFLTLLDAQRSLYSARQRYIAVQLSQLLNQ-----VDLYKALGGGW 471 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 5/183 (2%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP 333 N D+R + A+ I +S L+PS+S GS S Y T + + + Sbjct: 82 NNRDLRASALNVEAYQAQYRIQRSALFPSISGEGSGTKQRTLSGSSYVTSEIYTVSVGMT 141 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQET----VLNAIKEVENALTSINEDKKIVTKLQHA 389 ++ + +R + A EQY+ +ET L + EV A + D++++T + Sbjct: 142 AYEL-DLYGRVRNLKDQALEQYLAMEETHRSARLGLVAEVARAYLTWLADRELLTTTEDT 200 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + ++S L R+G + LD+ + + S+ +R +A+ +L + +G+ Sbjct: 201 LRVEEESFQLIEQREREGIATQLDLAQARTSLETARANRSLYQRMVAQDINNLVLLVGTP 260 Query: 450 YNP 452 +P Sbjct: 261 LSP 263 >gi|160888102|ref|ZP_02069105.1| hypothetical protein BACUNI_00510 [Bacteroides uniformis ATCC 8492] gi|156862413|gb|EDO55844.1| hypothetical protein BACUNI_00510 [Bacteroides uniformis ATCC 8492] Length = 468 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 194/421 (46%), Gaps = 29/421 (6%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 + + + W E F D L L+ LQ N A R+ A+ +LS + PS +A Sbjct: 59 LGLGGMDWHELFTDPHLQALIGQGLQNNTDYQSAQLRVEEAEATLLSAKLAFLPS-FALA 117 Query: 105 SHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 + + ++ Q + + W++D+FG+ R+ + L YAQ + V ++ Sbjct: 118 PQGTVSSFDSHKATQTYSLPVTASWELDVFGRMRNAKKQSKAL---YAQSQDYRQAVRTQ 174 Query: 160 LIP----SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 LI +Y ++++I+ Q + +++ + + G ++ ++ ++EA + Sbjct: 175 LIAGIANTYYTLLMLDQQLAISRQTEETWRETVASTRALMNAGMANESAVSQMEATYYQV 234 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + LE+ ++++ LL A HY ++ + + +IGIP ++ R Sbjct: 235 QTSVLDLEEQINQVENSLALLL---AETPRHY--ERGVLAEQQFPVGFSIGIPVQMLSCR 289 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLY 331 PD+R E+ L + A+S YPS++L GS T+ PG + G L Sbjct: 290 PDVRSAERTLEAAFYGTNAARSAFYPSITLGGSAGWTNSAGSMIVNPGKFLASAVG-SLT 348 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED---KKIVTKLQH 388 P+F +G++ + R A + +E + +Q+T+LNA EV +ALT+ +++ K Sbjct: 349 QPLFARGQVIAQYRIARAQQEEASLAFQQTLLNAGSEVNDALTAWQTSLSKSELLDKQVA 408 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +++ +S SL M G + L++L + ++ + + +S ++LY A+G Sbjct: 409 SLQTAARSTSLLM---EHGNTTYLEVLTARQTLLNAQLAQTANRFSEIQSLINLYKALGG 465 Query: 449 G 449 G Sbjct: 466 G 466 >gi|193212935|ref|YP_001998888.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobaculum parvum NCIB 8327] gi|193086412|gb|ACF11688.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobaculum parvum NCIB 8327] Length = 484 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 110/480 (22%), Positives = 222/480 (46%), Gaps = 48/480 (10%) Query: 5 RAIFSLFIVLLAG-----CTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESF 56 RA+ L ++ AG C+ EY +P + L P Q + G K L + + E F Sbjct: 11 RALPLLLLISFAGFGLSACSPIKEYRRPDVALPETYPGQKTPG--KELARV---PYREFF 65 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN- 115 D +L +L+ A++ N + A + I+ A++++ + P + ++ + + + + Sbjct: 66 ADPALLELIDSAVENNHDLRIAMKNIDYARKSLDVAKLWFLPEADLGATYSYSKDSRNSY 125 Query: 116 --STGQ----------LDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVIS 158 S GQ L W D++ + + + L + D+A A + ++S Sbjct: 126 GASKGQERTSRSYTAALSVSWDADIWAKLQNSKKAALAEYLRSTDAARA----VRTTLVS 181 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + E+I IA + + L + + L++ G + L++ + EA++ + + Sbjct: 182 SVAQGYWNLTMLDEQIDIARRNIALADTTLAMMRLQYDAGNVTSLAVDQQEAQLLTAKLA 241 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 +P LE S + +S L G P T K+S + + +P + G+P L+RNR Sbjct: 242 LPKLEASRNAQENALSILAGRMPGTPI-----KRSQGAKA-VVLPDSLGAGVPLALLRNR 295 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY---- 331 PD+R E L ++ A G+ K+ +YPSL++ L S ++T S L Sbjct: 296 PDVRAAEASLMEAHAMTGVNKAMMYPSLTVTAEGGLNAIESSKWFSTPGSLFESLLGGLT 355 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G++K+ +++ + + +++T+ A+ EV NAL +++ + + V Sbjct: 356 QPVFRHGQLKAQYEQSKIKRDQAELAFRKTLFVAVGEVSNALEQVDKTGEQENIAEARVA 415 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +K+ S S + + G + L+++ E + + E++L+ +R + DLY A+G G+ Sbjct: 416 ALRKAASNSCLLFNSGMATYLEVITAESSLLQSELELADVQRSHLAAIADLYRAVGGGWQ 475 >gi|326315209|ref|YP_004232881.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372045|gb|ADX44314.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 523 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 94/428 (21%), Positives = 186/428 (43%), Gaps = 45/428 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F D L+ L+ AL ++ + A RI A+ + RA P S+ R+ Sbjct: 91 WWRGFGDAQLDALIDQALSRSPNLKLAEARIARAQAFTEATRAADRPQVNGSLDANRQRY 150 Query: 109 IPN----------LKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 N + ++TG+L W++D FG+ R I++++ + ++A A A++ + Sbjct: 151 SANSIYPPPLGGSTENSATGRLTGSWELDFFGKNRAAIDAAVGSANAAIADAQAARVLLA 210 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ Y++ ++++ +A + L+ + + L + G ++L + E + Sbjct: 211 SNVVRQYVELARVQDQLGVAQRTLEQRTQTLSLVRDRVAAGLDTRLEERQSEGSLPEARQ 270 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATE---------FLHYMQKQSNNFQPNLYIPINIGIP 268 I L + M + + L+G P LH + + Sbjct: 271 QIEALREQAAMARNALDALVGQPGAAQALVPPPLTSLHAIALPAALPA------------ 318 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 DL+ R DI ++ + + +AK+ YP++SL + L DN G + W Sbjct: 319 -DLLGRRADIAAARWRVEAATQDVAVAKAQFYPNVSLTAFVGLASLGLDNFVKGGSREWG 377 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP + LPIF+ G++++N+R + ++ T+L+A+ E + + S + + Sbjct: 378 VGPAIRLPIFEAGRLRANLRGKAADVDAAVESYNATLLDALHEAADQIASARSIDQQAAE 437 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDL 442 + A + + +++ YR G + L++L E + + VDL A R+L + L Sbjct: 438 QREAQASAESAYAIAQQRYRAGLGNYLNVLTAETSVLQQRRQAVDL--AARRL-DNQARL 494 Query: 443 YIAIGSGY 450 A+G GY Sbjct: 495 ARALGGGY 502 >gi|270157846|ref|ZP_06186503.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|269989871|gb|EEZ96125.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] Length = 471 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 218/465 (46%), Gaps = 40/465 (8%) Query: 20 VGPEYTKPHMP--------LLP-----TQFSIGNSKNLI-NID-TLKWWESFNDTSLNKL 64 VGP + P P LP T S G ++ I N D L WWE ++ +N+L Sbjct: 2 VGPNFHSPAPPKVKHYTEKPLPEKTVKTAGSGGQQQSFITNKDIPLLWWELYHSPEINQL 61 Query: 65 VKIALQQNLTILQATERINAAKENIL-SVRADLFPS---SYASISHRF------IPNLKT 114 + L + T++ A+ + A+EN+ + ++P+ + A R+ IP+ Sbjct: 62 IHTGLANSPTLVAASAALRQAQENLKEQIGNSMWPAIDVTDAIQRQRYSGVQIGIPSESV 121 Query: 115 NST---GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + + +D+FG RR IE+ A +D +V A L + S ++ + + + Sbjct: 122 TFSLYYTSFNLSYTLDVFGGARRQIEALRAQVDYQQFEVIAAYLTLTSNIVTTAVAVASY 181 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +I +++ + + L + ++ G SK +++ + ++ ++ +P L+KS Sbjct: 182 QAQIEATLELIQAEQGILNLLNKQYRLGGVSKENVLTQQTLLEQSKATLPPLQKSLSQAK 241 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADS 288 H +STL+G L ++ L +P + + +P++L+R RPD+R E L + Sbjct: 242 HALSTLVGAFPDGPLPTIRLD------RLKLPTELPVSLPSNLVRQRPDVRASEALLHAA 295 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A+IG+A ++L+P +++ G + + N + N WS + P+F G + + R Sbjct: 296 CAQIGVATANLFPQFTISANEGWLNTSWSNLYTARNNVWSATGTVLQPLFHGGALLAQRR 355 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ Q+ +Q+ VL A + V + L + D + + A + + S++L++ YR Sbjct: 356 AAIAAYQQTAAQYQQIVLQAFQNVADVLRGLEVDARTLQAQIRAEDAARASLNLTLKQYR 415 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S +++L+ ++ + + A+ L+ A+G G+ Sbjct: 416 LGAVSYINLLNAQQQYQQTRISRIQAQATRYNDTAALFQALGGGW 460 >gi|215486591|ref|YP_002329022.1| predicted outer membrane channel protein [Escherichia coli O127:H6 str. E2348/69] gi|215264663|emb|CAS09034.1| predicted outer membrane channel protein [Escherichia coli O127:H6 str. E2348/69] Length = 457 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 105/459 (22%), Positives = 218/459 (47%), Gaps = 28/459 (6%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 S + +DLFG+ + + E+ LA+ +A + +L +I+++ +++ +++ Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQS----TRLTLIAEISTAWLTLAADNSNLAL 178 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + + ++++ + G + + + + + + + + + + + ++ L Sbjct: 179 AKETMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLL 238 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G E L +S Q +P G+ +D++ RPDI+ E L + A IG A+ Sbjct: 239 AGTTLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAAR 296 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 297 ANFFPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKR 355 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 T+++TV +A KEV NAL ++ + V+ ++++ + + Y+ G L Sbjct: 356 GLIATYEKTVQSAFKEVANALARRTTLEEQLDAQSQYVKAEQQTVDVGLRRYQAGVGDYL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R+ + +L + + + L+ ++G G + Sbjct: 416 TVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|75677091|ref|YP_319512.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter winogradskyi Nb-255] gi|74421961|gb|ABA06160.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter winogradskyi Nb-255] Length = 522 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 207/465 (44%), Gaps = 35/465 (7%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------KWWESFNDTSLNKLV 65 +L+GC VGP++ KP P ++ + + + ++ +WWE F +LN+LV Sbjct: 39 VLSGCAVGPDF-KPPAPPDTVKYLSDRAGDRVPGHSIVRAGEVPPQWWELFRSPALNRLV 97 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIP-----NLKTNS-- 116 + + N + A + A+ N L+ R LFPS + S + +P L++N+ Sbjct: 98 EDGIAHNADLAAAEAAVRVAQANALAQRGALFPSVMGNFESSRQQVPVDLQSPLESNAHL 157 Query: 117 ----TGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 TGQ+ + D++ G RR +ES+ + Q + L + S + + I+ + Sbjct: 158 LSLHTGQVTVSYLADVWGGTRRLVESANSQARMRAFQREGVYLTLASNIALAAIEEGRLR 217 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I+ ++L L + + L + QG ++ + E + +P LEK H Sbjct: 218 GHIAATRRVLGLQGEVLRLLRRQQEQGQIAQTDVAAQETAVAQTRLLLPDLEKKLAQQRH 277 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S L G A++ + +F+ +P+ +PADL+R RPDI+ E A Sbjct: 278 LLSFLTGRLASDDPKE-RFDLGSFRMPRRLPLT--LPADLVRQRPDIQAAEADFQSDNAM 334 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAE 348 IGIA ++ P ++L S N G IFD G++++ R AE Sbjct: 335 IGIAIANRLPQITLTASGGAAAAQFTQLANPAAGLGIIAGNAAQTIFDAGRLENRQRAAE 394 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + A++ ++ VL A + V + L ++ + ++ A +S++L QG+ Sbjct: 395 AEAEQSLAQYRSVVLAAFQNVADVLRALQAGTRAISAATGAERSATESITLVRKQVDQGQ 454 Query: 409 YSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S+ +L + A T+ +D A QLA + L+ A+G G+ Sbjct: 455 ISVPLLLAAQEAYLETSLARLDAQAA--QLANTAA-LFQALGGGW 496 >gi|294649284|ref|ZP_06726719.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292824837|gb|EFF83605.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 462 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 16/445 (3%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LAGC+ V Y P + + P QF K T +WW FND LN+LV L +N Sbjct: 18 LAGCSAVVKTPYNAPTVQV-PQQFQYDAQKKQNVKLTDQWWTLFNDAQLNQLVDQVLAKN 76 Query: 73 LTILQATERINAAK--ENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----WKI 126 ++ A + A+ + R L SS S H + S L + +++ Sbjct: 77 SDLIVAGITLKQARLQAGLAENRQGLRTSSSVSTGHNYDLRSGNGSDRGLSTSVGVSYEL 136 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ E++ ++ + ++++ Y + ER + Q L + Sbjct: 137 DLFGKLANQTEATRWEALASEQDLQATAQSLVATTAKLYWQLGYLNERYNTIQQNLASTQ 196 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 K EL ++ GA S L L + E ++S ++ + +E+ I+ LL P + Sbjct: 197 KIYELVQSQYRAGAVSGLDLTQAEQSVQSQKASLSQIEQQRVEARTAIAVLLHQP----I 252 Query: 246 HYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + Q P +P I +G+PA+++ RPD++ E +L ++A K+ YPS++ Sbjct: 253 QQLNIQEPAQLPQSVLPNIAVGLPAEILSRRPDLQASELRLRKTLANKDATKASYYPSIN 312 Query: 305 LNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 L G++ + + + N + G L LP +K +I ++ ++ +++ + Sbjct: 313 LTGNLGASSTSLTQLLQNPALTLGASLSLPFLQYNDMKKDIAISDLEYEKAITQYRQGLY 372 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A +VENAL++ + + V Q VEL +K+ L+ + YR G +L ++LD + T Sbjct: 373 QAFADVENALSNRMQLNQQVQLQQRNVELAEKTEHLTEVRYRNGAIALKNLLDAQATTRN 432 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 + L K+ +YV L A+G Sbjct: 433 ARLSLVETKQNQYNAYVTLMQALGG 457 >gi|186471938|ref|YP_001863256.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184198247|gb|ACC76210.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 486 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 113/495 (22%), Positives = 209/495 (42%), Gaps = 74/495 (14%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI---------------GNSKNLINI 47 + +AI L C+ P Y++P + P F+ G ++ Sbjct: 9 VRKAIAVAVASALGACSTLPHYSQPQSAV-PDHFASTPQPAAGWTVAAPADGEARG---- 63 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-H 106 WW FND LN L N T+ +A ++ AA+ + RA P A S Sbjct: 64 ---PWWTLFNDDELNHLEAQVDVSNQTVRKAVAQLEAARSMVDYQRAGYAPVVTAGASAQ 120 Query: 107 RF---------------IPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVD 150 R+ +P+ T L + W+ DLFG+ ++ ++ N ++ A + Sbjct: 121 RYRTSQNVVHKGLAGHTVPDFSTG----LAASWEPDLFGRVKNATVNARDNAQASEADLQ 176 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +L+V + L Y D R + + + Y + + + GA ++ + + Sbjct: 177 SVRLSVATDLAIDYFDLRSLDRQKKLLDDTVTAYAAALRIVQQQLKDGAIDASAVAQAQT 236 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP---NLYIP-INIG 266 +++S + ++ H I+TL+G PA+ F + P + +P I G Sbjct: 237 QLESTRTQDSDIDVQRAQLEHAIATLVGQPASSF---------SLPPKVETVALPQIPAG 287 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTH 323 +P+ L+ RPDI E+++A + A+IG A++ YP+L+L+ + L P + Sbjct: 288 VPSQLLERRPDIAAAERRVAAANAQIGEARAAFYPNLTLSATAGLESSFFAPWLTASSLF 347 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS G ++ +FD G+ + + A + +++TVL A ++VE+ L+S+N Sbjct: 348 WSLGSQIAGTLFDGGRRAAALNNASAQYDGTVADYRQTVLVAFQQVEDDLSSLNTLANEA 407 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDI-------LDIERATAKVEVDLSIAKRQLA 436 Q A S+ L+ Y+ G L++ L ERA +++ R++ Sbjct: 408 DSQQRATAAADLSLKLTTNRYQAGAVDYLNVVTAQTIALSNERAAEQIDA------RRID 461 Query: 437 KSYVDLYIAIGSGYN 451 S V L A+G G++ Sbjct: 462 AS-VQLLKALGGGWD 475 >gi|91776932|ref|YP_546688.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91710919|gb|ABE50847.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 474 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 119/485 (24%), Positives = 209/485 (43%), Gaps = 56/485 (11%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN----SKNLINIDTLKWWESFN 57 NIL+A + I +L GC + P Q G+ +++ + WW+ F Sbjct: 4 NILKAFSTAVIAVLPGCMSMSGISTTAQPKDTAQLEAGHDISEARHDLPWPGEAWWQVFQ 63 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--------ISHRFI 109 D L+ LV +LQQ+ I A R A+ + A L P + A+ S +FI Sbjct: 64 DPQLDALVNHSLQQHPDIRAARSRTAIAEAQAQAAGALLAPQASANGTLVRERFTSLQFI 123 Query: 110 P-----NLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P + + N+ L+ + +DL+GQR + +S+L + A+ KL++ + L+ Sbjct: 124 PPPWAGHTEWNNKATLNLGYDLDLWGQRAQQWQSALDRTQATAAEAQQVKLSLTTALVMQ 183 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI +S AH + D+ ++++H + + + + E E+ ES IP L Sbjct: 184 YI-------ALSRAHALHDITHHRLDIAHQQLDIRKRALAAGLGTEIEVTEAESLIPALR 236 Query: 224 KSFRMNVHNISTL---LGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 I+ L L A E Y ++ P L + +IG+P A+L+ RP Sbjct: 237 AQLEAGDERITLLRQQLAALAGEGPGYAERL---HPPKLSLDADIGLPDALPANLVGRRP 293 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---------THDNSFPGYNTHWSFG 327 DI + ++ + I AK+ YP+++L G + L T G G Sbjct: 294 DIVAAKWRIEAARHNIASAKAAFYPNINLLGFVGLQAMGFGKILTESGMVAG------VG 347 Query: 328 PKLYLPIFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 P L LP+FD G + N+ + A EQY +L +++E+ L ++ + Sbjct: 348 PALSLPLFDGGLRRGNLAATTADYDLAVEQY---NSILLQSLQEISAQLVTLRSNAIQHA 404 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L A+ L ++S L++ +++ G + L +L+ E L + +Y DL Sbjct: 405 ELLDALRLAQRSRKLALTHHQAGLANYLQVLEAEHHVLTQHAALVDLEASRLSAYADLMK 464 Query: 445 AIGSG 449 A+G G Sbjct: 465 ALGGG 469 >gi|330993881|ref|ZP_08317813.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329759149|gb|EGG75661.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 521 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 41/484 (8%) Query: 1 MNILR-AIFSLFIVLLAGCTVGPEYTKPHM-------PLLPTQFSIGNSKNLINIDTLKW 52 M+ LR A +L +V LAGC VGP+Y +P L P + ++ + W Sbjct: 19 MHALRLACLALPLVALAGCMVGPKYHRPDAIVSARFKELRPEPGWENANPHMAELPKHDW 78 Query: 53 WESFNDTSLNKL-VKIALQ-QNLTILQATERINAAKENILSVRADLFPSSYASIS----- 105 W +ND LN L ++A+ QN+ +A+ R A+ I SVRA LFP+ S+ Sbjct: 79 WTIYNDPILNGLEAQVAISNQNIKEYEASYR--NARALIDSVRAQLFPTISGSLGFNRAG 136 Query: 106 ----------HRFIPNLKTNSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 + T +T L + W +DL+G+ RR ++ + ++ A + A Sbjct: 137 HGAGSLSSSGSNYAKEGSTYNTYDLGPSASWDLDLWGKIRRQVQEQVTAAQASAADLANA 196 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L+ ++L +Y + R+ + + + ++ ++++ +F G ++++ + Sbjct: 197 TLSYQAQLATAYFNLRYQDSLTDLLQRYVRFNEQALQITQNQFDAGTADPTAVLQARTTL 256 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + + + H I+ L+G P + S P I + +P+DL+ Sbjct: 257 EQNRASLVQAGINRAQYEHAIAVLIGRPPADVTIAPAPLSRTVPP-----IPVTVPSDLL 311 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGP 328 + RPDI E+ + A+IG + YP ++++ S A + + N WS G Sbjct: 312 QRRPDIAAAERTMEQYNAQIGADIAAFYPDVTISASYAQSGGDPVTSLMSVANRVWSLGA 371 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +F G + + A + T+++TVL A++ E+ L+++ + + Q Sbjct: 372 SATETLFSGGSRTAAVHEANAQYDNAVATYRQTVLTALQNTEDQLSNLRILSQQSLQQQK 431 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A++ +++ +S+ Y+ G ++ E A + E L I ++++ S V L A+G Sbjct: 432 ALDFANRTVEVSLNQYQAGTEIYTTVITNENSALSSAETLLGIQQQRMVDS-VSLVQALG 490 Query: 448 SGYN 451 G++ Sbjct: 491 GGWD 494 >gi|167565320|ref|ZP_02358236.1| outer membrane efflux protein [Burkholderia oklahomensis EO147] Length = 463 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 89/381 (23%), Positives = 174/381 (45%), Gaps = 20/381 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNK 63 A F+ LL+GC T P LP Q++ + + D WW F D +L++ Sbjct: 14 ATFACACALLSGCATRSRDTPPPSVSLPEQWASPVAAQASAAPDD---WWRRFGDPTLDR 70 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS- 122 L+ AL+ N + A R+ A+ +L P+ + L T+ G+ Sbjct: 71 LIDEALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNVSRTLDTHRMGRTSGI 130 Query: 123 ----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DL+G+ +++ L++ A D A+L++I Y + ++I++ Sbjct: 131 TATLGYELDLWGRLAAQRDAARWALEATQADRDAARLSLIGTTAALYWQVAYLNQQIALG 190 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + ++ ++L + GATS L + + E + ++ +D L + N + ++ L Sbjct: 191 DANIAYAERTLKLVRSRHAAGATSGLDVAQAERNLSALRADQTQLIQQRAENRNALAILF 250 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P Q P+ +P + G+PA+L+ RPD+R E +L +S+A + + + Sbjct: 251 DRPPQR-----QAAERGALPDAPLPEVAAGLPAELLGRRPDLRAAEFRLRESLANVDVTR 305 Query: 297 SDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + YP+ +L GS+ T S N + G L LP ++ I+ ++S +E Sbjct: 306 TSFYPTFTLTGSVG-TSSTSLERVLQNPVATLGLGLTLPFIQWNTMQLQIKVSKSRYEEA 364 Query: 355 YITWQETVLNAIKEVENALTS 375 + +++ + A+ EVENAL++ Sbjct: 365 VVNFRQNLYRALGEVENALSA 385 >gi|330944925|gb|EGH46740.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 315 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 145/293 (49%), Gaps = 6/293 (2%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI R + R++I ++ + + +E L +G + + ++EAE+ +++ +P L Sbjct: 11 TYITIRGLQARLAITNRQVKTRQDLLEKVQLLHERGLSPDYEVRQIEAELLQVQATVPIL 70 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + ++ + +LG P H P+ + G PADL+R RPD+ E Sbjct: 71 QTGLDAAMNALDVMLGVP--PGTHRGSLAETGRIPHAPALASTGTPADLLRRRPDLIVAE 128 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 ++LA S A+IG+A S+ YP LSL+ + A++ N F G + + L +FD G Sbjct: 129 RRLAASNARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGVLGLRWRLFDFG 188 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + I +A+ E ++++VL A ++VENA +S+ + L + Sbjct: 189 RVNARISQAKGQEAEALAAYRQSVLRATEDVENAFSSLANRETQAAMLDKGEAALASARQ 248 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +Y +G SL+++L + +V + A+ + A++ V ++ A+G G+ Sbjct: 249 SSFASYSKGAASLIEVLRADEKMLQVADAKAQARVESAQAAVAVFKALGGGWQ 301 >gi|107026953|ref|YP_624464.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116691850|ref|YP_837383.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105896327|gb|ABF79491.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116649850|gb|ABK10490.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 480 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 97/416 (23%), Positives = 198/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F+D L++L+ L NL + A ER+ A+ + RA L P +++A+ + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAAAERVKQAQALTVQKRAVLLPELDATAHAANARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGAG-LALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVD 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQENAKIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQI 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P + P + P+ + RPD+ ++ Sbjct: 236 SHQLNLIAVYSGRTPESVDRLVLAQAGEIPAPPVGAPGTL--PSQALLRRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADISQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLGSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|270159590|ref|ZP_06188246.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|289165616|ref|YP_003455754.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269987929|gb|EEZ94184.1| NodT family RND efflux system outer membrane lipoprotein [Legionella longbeachae D-4968] gi|288858789|emb|CBJ12697.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 499 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 103/494 (20%), Positives = 222/494 (44%), Gaps = 60/494 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHMP-------------LLPTQFSIGNSKNL-INID-TLKWWE 54 L VL+ GC VGP + P P + S G S+ L N D + WW Sbjct: 8 LCTVLITGCKVGPNFHAPEAPKTTRYNKGPLITKTVSASNSTGKSQRLHYNRDISNSWWT 67 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F+ LN L+ L+ N T+ + + A+ N+ + P +++ +F+ + + Sbjct: 68 LFHSKELNHLIDQGLKNNPTVAMSKASLRKAQANLRFIAG---PKLLPTVNTQFLGSRER 124 Query: 115 NS---TG-----------------QLD-------SDWKIDLFGQR-RHIESSLANLDSAY 146 N+ TG Q D + +DLFG R +E+ A +D + Sbjct: 125 NTLLATGININPLAGQKLPFSIKNQFDLYNASVSVSYSLDLFGGNLRQLEALRAAIDYEF 184 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 +++ A L + + ++ + I +++ +++ K+ ++++ + G S+ ++ Sbjct: 185 FELEAAYLTLTANIVTTSITIASLHDQLKTTQALINCQKELLQITTNNYNLGHISRFDVL 244 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN-LYIP--I 263 + +K + +P++++ + ++ L+G +E +Y NF N L++P + Sbjct: 245 NSDNNLKETLATLPSIKEGLARKYNALAVLVGSLPSE--NYFV----NFSLNSLHLPTEL 298 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS---LSLNGSIALTHDNSFPGY 320 + +P+ L+R RPDIR E L + A+IG+A +DL+P LS G + T F Sbjct: 299 PVSLPSQLVRQRPDIRSAESLLHQASAEIGVATADLFPKFNILSNYGWFSTTLSTLFNPM 358 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 N+ W++G ++ + G +++ + A + + +++ +L A +V + L ++ D Sbjct: 359 NSVWNYGGQIAQTLLKGGALRAKRKMAIAEFEYACARYKKIMLEAFLDVADVLHALEFDA 418 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 +++ ++ + + + L Y+ G+ + L +L+ A + +++ A Sbjct: 419 ELLQAQVNSEQNRQSRLKLITTQYQLGKTNYLSVLNAREAYLRAHLNVIRANAARYNDTA 478 Query: 441 DLYIAIGSGY--NP 452 L+ ++G G+ NP Sbjct: 479 ALFQSLGGGWWNNP 492 >gi|209519661|ref|ZP_03268450.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209499878|gb|EDZ99944.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 534 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 114/476 (23%), Positives = 206/476 (43%), Gaps = 41/476 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTS 60 AI + L+AGC VGP Y +P + P F ++ D WW + D Sbjct: 18 AISAACATLVAGCVVGPNYQRPATEI-PASFKEAAPGWKVAEPADQHDRGNWWAIYEDPK 76 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK------- 113 LN+L N I Q A+ + RA FP+ AS N Sbjct: 77 LNELEDHLNAANQNIAQFAASYRQARALVGEARAAYFPTVSASGGVTRSGNGTHTSGNAT 136 Query: 114 --------TNS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 TNS T Q+ + W+ DL+G R + + A A A + A+L+ + L + Sbjct: 137 TATSRAGITNSYTVQMQASWEPDLWGSVTRSVNAQQAGQQGAAADLANARLSAQATLAQT 196 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R + + Y+ +++L+ ++ G ++ +++ + +++S ++ Sbjct: 197 YFLLRALDSTQKLLDDTVIAYQHSLQLTQNQYAAGVAARSDVIQAQTQLQSAQAAAIDNG 256 Query: 224 KSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRY 280 + H I+ L+G PA+ F L M P P + +P+ L+ RPDI Sbjct: 257 IQRAQDEHAIAVLIGVPASTFSLPPM--------PLTATPPAVPAQMPSALLERRPDIAS 308 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIF 335 E+K A + +IG+A + +PSL+L+ S + + P + W+ GP+L IF Sbjct: 309 AERKAAAANEQIGVAIAAFFPSLTLSASGGFENSVFSQLLTLP--SRFWTLGPQLAGTIF 366 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G + A ++ T+++TVL A ++VE+ L S+ ++ + + AV ++ Sbjct: 367 DAGLRHAKTEAARATYDADVATYRQTVLAAFQDVEDNLASLRILEQEIVVQRQAVASARQ 426 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++ + Y+ G +++L + E L Q S V L A+G G++ Sbjct: 427 ALAIVINEYKAGTVGYVNVLTAQTTAFTAEQKLETIGGQRMVSSVGLVKALGGGWD 482 >gi|170736152|ref|YP_001777412.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169818340|gb|ACA92922.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 480 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 96/415 (23%), Positives = 195/415 (46%), Gaps = 28/415 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP- 110 F+D L++L+ L NL + A ER+ A+ + RA L P +++A+ + + P Sbjct: 57 FHDPVLDRLIATVLDSNLDLQAAAERVKQAQALTVQKRAVLLPELDATAHAADARQNTPP 116 Query: 111 --NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGAGLALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVDL 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 177 RWAQQELKILQDNAKIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQIS 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ I+ G + Q+ P + P + P+ + RPD+ ++ Sbjct: 237 HQLNLIAVYSGRTPESVDRLLLAQAGEIPAPPVGAPGTL--PSQALLRRPDVLTAYAQVE 294 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFD 336 A++G+AK++ YP SLN G +A ++ DN F + S PIF+ Sbjct: 295 RRAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIFN 347 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K+ Sbjct: 348 AGRITADISQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLGSALAASDKA 407 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 408 LGLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|294146690|ref|YP_003559356.1| outer membrane protein OprN [Sphingobium japonicum UT26S] gi|292677107|dbj|BAI98624.1| outer membrane protein OprN [Sphingobium japonicum UT26S] Length = 479 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 112/462 (24%), Positives = 217/462 (46%), Gaps = 33/462 (7%) Query: 18 CTVGPEYTKPHM--PLLPT-QFSIG-NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 CT GP+Y P P+ P QF+ + + WW + D L+ L AL N Sbjct: 21 CTAGPDYHGPEAARPVSPAAQFARAPTDASAQAPASAAWWTALGDPVLDALESRALAANP 80 Query: 74 TILQATERINAAKENILSVRADLFPSSYASI--SHRFIPNLKTNSTGQ------------ 119 + A R+ A+ ++ + RA+ P+ AS H +P + S+ + Sbjct: 81 GVAVAEARVRQARASLRTERANALPNVNASALYVHATVPGVDLGSSEEDSSEGGDSQSLN 140 Query: 120 -----LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 D+ W++DL+G +RR +E++ A +++A A V A++++ +++ +Y++ R ++R Sbjct: 141 FYNLGFDASWEVDLWGGRRRGMEAARAEVEAAQANVADAQVSLTAEIAQAYVNLRDRQQR 200 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I++A Q ++ + L+ + QG S L + + +++ ++ + L ++ + Sbjct: 201 IALAQQAAARQREMLRLTEQRHAQGTASALEVEQQRNQLEQSDAALLPLSAERDAYLNAL 260 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 +TL G A L M + +G PA L+R RPDIR E++ A + A+IG Sbjct: 261 ATLAGE-APGALDAMLAAPAPVP-LPPAQVAVGDPAALLRRRPDIRAAERRFAAATARIG 318 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPG----YNTHWSFG-PKLYLPIFDKGKIKSNIRRAE 348 +A++ +PSLS G I + + PG +T + P+L D G+ + + +AE Sbjct: 319 VAEAARFPSLSFMGLIGIGGTD--PGDLVDLDTLAAIAMPRLSWSFLDFGRNAARVGQAE 376 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + E +++ VLNA+++ E+AL+ + V + ++ +L + G Sbjct: 377 GARDEAAAQYRQAVLNALRDSEDALSRFGARRLSVASAARSKASADRAAALVRQRFEAGT 436 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + +LD ER + L+ + Y+ L A+G G+ Sbjct: 437 ATRIQLLDAERQSLAAAQALTQGTAAMTADYIALQKALGLGW 478 >gi|15603845|ref|NP_246919.1| IbeB [Pasteurella multocida subsp. multocida str. Pm70] gi|12722419|gb|AAK04064.1| IbeB [Pasteurella multocida subsp. multocida str. Pm70] Length = 463 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 109/424 (25%), Positives = 201/424 (47%), Gaps = 35/424 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHR 107 WWES+ D L++L++ L QN + A +I A+ + ++ FP+ + + SH Sbjct: 49 WWESWQDPQLSRLIQQGLAQNHQLAIAKSKIQEAQAIVKIAQSTRFPTIGALANSGKSHL 108 Query: 108 FIPNLKTNSTGQLDS---DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPS 163 I + +G L W+ D+FGQ+R +++ A + A Q A++ V S++ Sbjct: 109 DIEQIDITPSGVLGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQILVASEIAHY 168 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ A H K++ ++ + K +F G S +++ + S+ + L+ Sbjct: 169 YLQALHNKKQQALLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILD 228 Query: 224 KSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 F + I+ L+G F L Q Q+ + +L P PADL+ RPDI+ Q Sbjct: 229 AQFIAAQNAIAVLIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQT 288 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHD-NSFPGYNTHWSFGPKLYLPIFD 336 + AK+ AK+DL+P +L+ G I L D + + S G + LPIF Sbjct: 289 ANVKAHAAKLASAKADLFPRFTLDFLWQTGRIKLDADLPTLQAWQNVVSAG--IQLPIFT 346 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELH 393 G+I++NI+ ++ Q+ + + T+L A+ EVEN S+ + +++T+ A Sbjct: 347 AGRIQANIQASDERLQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQ---ASRTQ 403 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL------AKSYVDLYIAIG 447 ++ + + ++ G Y+ +L A+++ L++ ++QL A + V LY AIG Sbjct: 404 QQQVRDTQKLFQYGDYTFDRVLQ-----ARLDA-LTLEEKQLENQLACAMNLVLLYKAIG 457 Query: 448 SGYN 451 G+ Sbjct: 458 VGWQ 461 >gi|57237420|ref|YP_178433.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni RM1221] gi|57166224|gb|AAW35003.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni RM1221] gi|225423356|gb|ACN91185.1| CmeC [Campylobacter jejuni] gi|315057788|gb|ADT72117.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni S3] Length = 492 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLAN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKETYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|325299062|ref|YP_004258979.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] gi|324318615|gb|ADY36506.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] Length = 455 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 111/471 (23%), Positives = 209/471 (44%), Gaps = 52/471 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I LLAGC + Y++ + + + +I +L W E F D L L++ Sbjct: 7 ILCSAAALLAGCHIYKPYSRSDVQTDGLYGQDVPADDTSSIASLPWTELFTDVQLQPLIR 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS---- 122 L N + A R+ A+ + S R ++P+L N GQL S Sbjct: 67 EGLANNTDLGIARLRVKEAEATLQSSR------------LAYLPSLSLNPQGQLSSYDGA 114 Query: 123 ------------DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 W++DLFG+ + + + A L+ + A + +I+ + SY + Sbjct: 115 KTDKTYHIAASAAWEVDLFGKLTNAKRGAKAALEQSEAYRQAVQTQLIATIANSYYNLLT 174 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ I+ + + + + + K G ++ ++ + A S+E+ + TL+K R Sbjct: 175 LDRQLDISSRTAESWAEVLRTYEAKLQVGEATEAAVAQARASKLSVEASVLTLQKQIRAQ 234 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +++S LLG P + + F L + G+P L+ RPD+R E LA + Sbjct: 235 ENSLSILLGRVPGS--IERTTLDGQRFPDTLAV----GVPLQLLGRRPDVRQAEAALAQA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGP--KLYLPIFDKGKIKSNIR 345 A+S YPS++L+GS T++N N +W L +F++G+ +N+R Sbjct: 289 FYNTNAARSAFYPSITLSGSAGWTNNNGAAIVNPGNWLLSAIGSLTQSLFNRGQNITNLR 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKI----VTKLQHAVELHKKSMS 398 A++ +E +++++++L A EV +AL + N KI VT L+ AV+ ++ M Sbjct: 349 IAKARQEEALLSFRQSLLKAGCEVNDALMQWQTANSRLKIIAEQVTSLRTAVDNTQQLME 408 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S S L++L +A + E+ + + + ++LY ++G G Sbjct: 409 FS------NSASYLEVLTARQALLQAELTETNDRFDQIQGIINLYHSLGGG 453 >gi|154494232|ref|ZP_02033552.1| hypothetical protein PARMER_03582 [Parabacteroides merdae ATCC 43184] gi|154086094|gb|EDN85139.1| hypothetical protein PARMER_03582 [Parabacteroides merdae ATCC 43184] Length = 463 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 192/419 (45%), Gaps = 27/419 (6%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 N+ L W E F D L L++ L N+ + A R+ AK + S R PS + Sbjct: 55 NMGNLPWKEVFRDPKLQALIEEGLANNVDMQAAILRVEEAKLLLTSARLSFLPSLNLAPQ 114 Query: 106 HRFIPNLKTNSTGQLDS-------DWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNV 156 K +TG + + W++DLFG+ + A L S Y Q I + + Sbjct: 115 GTIT---KMENTGYVKAYTLPAAASWEVDLFGKLLNASRGQKAAYLQSQYTQQAI-RSQL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I + +Y ++ I + +D+YK+N+ G T++ ++V++ A + Sbjct: 171 IGGIANAYFTLLMLDRQVEITSKTVDIYKENVRAMEAMKVAGMTTEAAVVQMRAVYHQVS 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + L++ R +++S LL Q + + +P + G+P L+ N Sbjct: 231 GSLIELKRQVREVENSLSVLLAKAP-------QPIDRSTLEDQVMPEELMAGVPLQLLEN 283 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWSFGPKL 330 RPD++ E LA + A++ YP +++ + T+ + S PG + L Sbjct: 284 RPDVKVAEMTLASAYYTTNKARAAFYPGINITATAGWTNGSGVTVSNPGQFMFQALA-SL 342 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF+ GK+ +N++ +++ Q + +Q+T+L A KEV +AL + + + + + + Sbjct: 343 AQPIFNNGKLVANLKISKAEEQIAKMNYQQTILEAGKEVSDALHLYDATNRKLIQDKAQI 402 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E +K+++ + ++ G+ + L+IL +++ ++ Q ++ ++LY A+G G Sbjct: 403 EELEKAVTYTNALFQSGQSTYLEILSAQQSLLSAQLTEVSDNVQRMQAVINLYSAVGGG 461 >gi|325523689|gb|EGD01955.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 476 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 98/417 (23%), Positives = 195/417 (46%), Gaps = 32/417 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F D L++L+ L NL + A ER+ A+ + RA L P +++AS + + +P Sbjct: 57 FRDPVLDRLIATVLDDNLDLQAAAERVKQAQALTVQKRAVLLPELDATAHASDARQNVPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYI 165 +K G L W D+FG R + + +A+ D +L + + +Y+ Sbjct: 117 PLGYVKQAGAG-LALSWSPDVFGGERLDLLAAQAALVGQKHAE-DAMRLALAADAAAAYV 174 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 175 DLRWAQQELKILQDNATIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQ 234 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKK 284 ++ I+ G + Q + P P + P+ + RPD+ + Sbjct: 235 IAHQLNLIAVYSGRTPESVDRLVLAQPGDIPAPPAGSPQTL--PSQALLRRPDVLVAYAQ 292 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPI 334 + A++G+AK++ YP SLN G +A ++ DN F + S PI Sbjct: 293 VEQRAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PI 345 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ Sbjct: 346 FNAGRITADIAQSESRMRESELGLRQTMLQALREVEDARANLVSTDQATRRLDSALAASD 405 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K++ L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 406 KALGLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|260173288|ref|ZP_05759700.1| putative transport related, lipoprotein [Bacteroides sp. D2] gi|315921561|ref|ZP_07917801.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695436|gb|EFS32271.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 456 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 213/459 (46%), Gaps = 22/459 (4%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTS 60 R I +L I ++L+ C + +Y +P + F S + NI L W + F D Sbjct: 3 RNIITLAITTLMLSSCGIYTKY-QPATTVPEDLFGAAETVSDTIHNIAKLNWRQLFVDPH 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L L++ L+ N + A R+ A+ ++ S R PS +A + + GQ Sbjct: 62 LQSLIEQGLRNNTDLQSAHWRVEEARASLSSARLAYLPS-FAFSPQGTVSSFDKGKAGQS 120 Query: 120 ----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPSYIDARHFKERI 174 + S W+ID+FG+ + L + +IA K +I+ L +Y ++ Sbjct: 121 YSLPITSSWEIDIFGRLTNANRRAKALYIQSQEYEIAVKTQLIANLANTYYTLLMLDAQL 180 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +I+ + +K+++ + G ++ L + EA SI + + L++ R +++ Sbjct: 181 TISEETEVKWKESVRVMQALKNAGQGNEAGLAQTEATYYSICTTVLDLKEQIRQAENSLC 240 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 +LG E ++++ + + Q L +++GIP L+ NRPD+R E LA + Sbjct: 241 LMLG----ETPQFIRRGTLDGQV-LPQDLSVGIPLQLLANRPDVRSSELALAQAFYTTNE 295 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A+S YPS++L+GS T+ PG + G L P+F+KG+ + ++ A++ Sbjct: 296 ARSAFYPSITLSGSAGWTNGVGEVVMNPGKLLLSAVG-SLTQPLFNKGQNIARLKIAKAQ 354 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E +++ +T+LNA EV NAL + Q + + +++ + + + G + Sbjct: 355 QEEAKLSFTQTLLNAGAEVNNALKQNQTARDKSDLYQRQISSLQTAVTSTQLLMQHGNST 414 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L ++ ++ + Q + ++LY A+G G Sbjct: 415 YLEVLTAQQTLLTAQLTQVSNRFQEIQGIINLYQALGGG 453 >gi|119356607|ref|YP_911251.1| RND efflux system outer membrane lipoprotein [Chlorobium phaeobacteroides DSM 266] gi|119353956|gb|ABL64827.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeobacteroides DSM 266] Length = 476 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 109/474 (22%), Positives = 209/474 (44%), Gaps = 38/474 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLL---PTQFSIG-------NSKNLINIDTLKWWESFN 57 L L C++ P Y +P P+ P IG +S + W F Sbjct: 9 LCLAATTLTACSLEPAYVRPTAPVTTQWPVASGIGTTTSTAPDSGGQPRTTDIGWRSMFR 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNS 116 L L++ +L N + AT I A+ R+DL PS AS S R + T+ Sbjct: 69 SPKLQSLIEESLANNRDLRIATLNIEVARNTWRIQRSDLLPSINASGSFTRQELSKSTSG 128 Query: 117 TGQLD-----------SDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSY 164 TG + + +++DLFG+ R + + N A + A+ ++I+++ +Y Sbjct: 129 TGNKEITSTYTANIGTTAYELDLFGRVRSLSNRAINQYLATEEGRKAAQTSLIAEVANAY 188 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + E + + L + +L + GA S+L + + +S + ++ Sbjct: 189 LTYLADVELLRLTESTLRTRQDAYDLIKRSYDLGAKSRLDVAQSATLAESARASRAQYQR 248 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ L+G L Q+ ++ + + GIP+ ++ +RPD+R E Sbjct: 249 QVEQDKNALTLLVGKEIDPKLLEPQRLTD---VQVLDTLPAGIPSVVLLDRPDVRQAEYA 305 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKI 340 L A IG A++ +PS+SL GS + + T WSF P++ LPIF G++ Sbjct: 306 LKAENANIGAARALFFPSISLTGSTGFASASLSDLFVTRSSGIWSFAPQITLPIFQSGRL 365 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA----VELHKKS 396 ++N++ AE++ +++ + A +EV +AL + + T+ HA V ++ Sbjct: 366 RANLKLAETNRDIAVAKYEKAIQTAFREVSDALVA----RATYTEQLHAQRALVTESDQA 421 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ Y G S +LD +R+ + + + + +Q + +DLY A+G G+ Sbjct: 422 RTITKARYDHGIDSYFALLDAQRSLFEAQQNEILIHQQTLANLIDLYKALGGGW 475 >gi|86143654|ref|ZP_01062030.1| putative outer membrane lipoprotein [Leeuwenhoekiella blandensis MED217] gi|85829697|gb|EAQ48159.1| putative outer membrane lipoprotein [Leeuwenhoekiella blandensis MED217] Length = 466 Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 115/479 (24%), Positives = 217/479 (45%), Gaps = 54/479 (11%) Query: 7 IFSLFIV-----LLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTS 60 I+ +FI+ LLA C EY +P + T + ++ IN+ + W E F+D Sbjct: 6 IYRIFILGAVPLLLASCFAAKEYERPQELIDETYYRTDAIEQDSINMAVVSWRELFSDPI 65 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNST- 117 L ++ L+ N+ I A ++I AA+ N +A FP+ + A ++H+ L +NS Sbjct: 66 LQGHIETGLENNIDIRVALQQILAAEANFKQGKAGYFPTLDATAQMTHQ---ELSSNSQF 122 Query: 118 GQLDSD-----------WKIDLFGQRRHIESSLANLDSAYAQVDIA----KLNVISKLIP 162 G L S W+ D++G+ I S+ + Y Q A K +++ + Sbjct: 123 GGLFSSLDQYELSASLSWEADIWGK---IRSNKRAFGAQYLQTVEAHKAVKTQLVAMIAS 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SY E++ + + ++ ++E + G +++ + + EA++ + ++ L Sbjct: 180 SYYQLLALDEQLRVTEETIETRSSSLETTKALKEAGNVTEVGVKQTEAQLYTAQALRIDL 239 Query: 223 EKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 R+ ++ S LLG P T ++ Q + + G+PA L+ NRPD+R Sbjct: 240 INEIRLLENSFSILLGQQPGTIERDGLRNQ------EIETSLKTGVPAQLLVNRPDVRAS 293 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E L ++ +A+S+ YPSL+L+ S AL D F + + L PIF++ Sbjct: 294 EFALINAFELTNVARSNFYPSLTLSASGGLQALQIDELFDTNSLFATLIGGLTQPIFNRR 353 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVE 391 IK+ A++ ++ + +++ +L A +EV +AL + ++ +K A E Sbjct: 354 SIKTQYEVAQAQQEQARLQFKQALLTASREVSDALYTYEAATEKLDVKRKEFESYNTATE 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + + NY L++L +DL + +S VDLY A+G G+ Sbjct: 414 YSEELLDNGLANY-------LEVLTARENALNSSLDLINTRLTQLQSVVDLYEALGGGW 465 >gi|330890799|gb|EGH23460.1| outer membrane efflux protein [Pseudomonas syringae pv. mori str. 301020] Length = 335 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 36/326 (11%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLINIDTLK---WWESFNDTSLNK 63 L +VLL+ C VGP+Y P M P QF + D + WWE + D LN Sbjct: 20 LGLCVVLLSACAVGPDYQTPSM-AAPAQFKAAEGWRAATPGDAMAKGAWWEVYRDPQLNS 78 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------SYASISHRF 108 LV+ N T+ Q + A+ + S R P+ + + ++ Sbjct: 79 LVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTGKTRSGQGTGTSNTGTNTG 138 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + QL W+ D++G+ RR +E+ A+ ++ A + +L++ S+L+ +Y+ Sbjct: 139 ASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADLAAMRLSLQSELVQNYLQL 198 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R E+ + +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L Sbjct: 199 RVIDEQKRLLESTVDTYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRA 258 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEK 283 + I+ L+G +F N + IP I G+P+ L+ RPDI E+ Sbjct: 259 QFENAIAVLMGMAPADF---------NLLASTSIPQLPQIPPGLPSQLLERRPDIAAAER 309 Query: 284 KLADSVAKIGIAKSDLYP--SLSLNG 307 + + A IG+AK+ YP +LS++G Sbjct: 310 SVMAANANIGVAKAAYYPDFTLSMSG 335 >gi|187920278|ref|YP_001889309.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia phytofirmans PsJN] gi|187718716|gb|ACD19939.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 498 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 98/464 (21%), Positives = 200/464 (43%), Gaps = 35/464 (7%) Query: 18 CTVGPEYTKPHMP---------LLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLV 65 C+VGP++++P P L T S + T WW F +++ V Sbjct: 37 CSVGPDFSRPPSPGVDRFVQGDALRTPLQAAGSVQTFSAQTNVPSDWWTRFGSLAIDSAV 96 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPN-LKTNSTGQL- 120 AL N TI A + +++ + + +P + +A ++ P+ + N L Sbjct: 97 DEALTGNATIEGAQAALRQSEDEMRAGAGVFYPQVDAGFAGSRQKYSPSRIGANEPSTLF 156 Query: 121 -------DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +D++G QRR +E+ A +D+ V L + ++ + I +++ Sbjct: 157 NLFTLSASVSYALDIWGGQRRMVEALQARVDAQRYTVLATYLTLTVNVVNAMIARAAYRD 216 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 I+ ++ L + I ++ + GA++ +++ LE E+ ++E+ +P LE+ Sbjct: 217 EIAATREMTALVHEQIRITQAQVEAGASAYAAVLTLENELATLEASLPALEQKRAQAEDL 276 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +++L G E+ H + +P +PA L+R RPDI E L + A I Sbjct: 277 LASLSGMLPVEW-HAPDLSLEDITLPHTLPET--VPASLVRRRPDILQAEAALHVASANI 333 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKSNIRRA 347 G+A ++L P ++L+ S +DN+ H W+ + P+F G + R A Sbjct: 334 GVATANLLPGVTLSASGG--YDNTSMSALLHRSGQIWTIAADVSAPVFHGGTLWFQRRAA 391 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + ++++ VL+A +V + L ++ D + + A + +++ L +Y G Sbjct: 392 LNAYAQTRASYRQVVLSAFAQVADTLRALENDAQALDAQTRARDAAAEALRLVEADYAAG 451 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L + + + Q + V LY A+G G+ Sbjct: 452 TVGYVQTLIADGLFHQARIAWLQGVAQRLQDTVALYAALGGGWE 495 >gi|148652694|ref|YP_001279787.1| RND efflux system outer membrane lipoprotein [Psychrobacter sp. PRwf-1] gi|148571778|gb|ABQ93837.1| RND efflux system, outer membrane lipoprotein, NodT family [Psychrobacter sp. PRwf-1] Length = 586 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 105/480 (21%), Positives = 217/480 (45%), Gaps = 56/480 (11%) Query: 8 FSLFIVLLAGCT------VGPEYTKPHMPLLPTQ-FSI-GNSKNLINIDTLKWWESFNDT 59 S V ++ C P +P++PL P + + + GN++ ++ ++W ++D Sbjct: 33 LSALTVAISACQSVPLADTSPTVARPNIPLNPGENYELYGNNQVPSSLAAVRWQSFYSDP 92 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNL 112 L L+++ L N + QA I A+ ++ P+ SY + + R Sbjct: 93 KLKALIQMGLDNNKDVKQAVLAIQKAQAQYRITDSNDAPNLGLNGDYSYGASNARDRNPS 152 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + + G + +++D +G+ + + +L N S A D A++++I+ + SY++ + + Sbjct: 153 DSFNVGLGMAAYELDFWGKVASLKDQALQNYLSTTAARDTAQVSLIANIAKSYVNLSYQQ 212 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++ +A L ++++ ++ + G I+S P+L+ + Sbjct: 213 KQLELAISTLQTREESLRITQARLAAG----------------IDSKAPSLQAAASAETA 256 Query: 232 NISTLLGYP-------ATEFLHYMQKQSNNFQPNLYIP-------INIGIPADLIRNRPD 277 I+ L A +FL Q S + P+ IP ++ G+P+DL+R RPD Sbjct: 257 RIAALNAQSGVLRAKNALKFLVGTQI-SEDMMPDPAIPSITSSQVLSAGLPSDLLRYRPD 315 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 + E L + A I +A++ YPS+SL G++ + + F WSFGP + LP+ Sbjct: 316 VLQAEYNLKAAGANIDVARAAYYPSISLTGNLGYSSSDLSDLFKSSAGSWSFGPSIRLPL 375 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVE 391 FD G+ +N A+ + ++ TV A KEV + L +++ + +LQ E Sbjct: 376 FDAGQRDANYEVAQIERDQAVANYESTVEAAFKEVNDVLADRATLDARTQAEYRLQ---E 432 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +S ++ L +LD +R+ + + +++ + ++LY +G G N Sbjct: 433 NYQGLFDISEARFKAQVDDYLAVLDAQRSLFSTQQSILNLEQERLNNQIELYQVLGGGAN 492 >gi|226228047|ref|YP_002762153.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] gi|226091238|dbj|BAH39683.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] Length = 479 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 96/476 (20%), Positives = 209/476 (43%), Gaps = 43/476 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHM-PLLPTQFS----IGNSKNLINIDTLKWWESFNDTSLNKL 64 + + ++GC V P P + P P F + + + T+ W F D++L L Sbjct: 11 VMVAGVSGC-VAPSMPAPLVRPPAPASFGGPTDSAHRADTTSTATVNWRTFFEDSTLRAL 69 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------SHRFIPNLKTNSTG 118 ++ A+ N +L + + A+ + ++R L P A S R+ N++ Sbjct: 70 IETAVANNPEMLSTLQEVEMARNEVRAIRGRLAPQVRAGATLGMDKSARYTAEGAGNAST 129 Query: 119 QLD-----------------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVIS 158 + + W+ D+ G+ R + A L V+ ++ ++++ Sbjct: 130 DITEGKEVPEPLGDIGLGFTASWEADIRGRIRSQKG--AALTRYLGTVEGSRYVMTSLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y + ++ I Q +DL + +++ + A S+L++ + +A + + +S Sbjct: 188 EIANTYYELTALDAKLVIVQQAIDLQRNALDVVRAQREAAAVSELAVQQFQALLLNSQS- 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 LE R + L A + + + S + P+ ++ G+PA LI+NRPDI Sbjct: 247 ---LEFELRQQIREAENRLNLMAGRYPQVVAR-STSLGPSTLRSLDAGLPAQLIQNRPDI 302 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGPKLYLPI 334 R E +L + + A+++ +P L+L+ + L +S + T WS P+ Sbjct: 303 RAAEFQLQAARFDVKAARAEFFPELNLSAGLGLRAFSSKYLFTTPESMAWSVAGDAMAPL 362 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 ++ IK+ RA ++ Q+ ++ VL + EV +++I+ +++ T E Sbjct: 363 LNRTAIKAEFARASAAQQKALYDYRRVVLGGVTEVSTLVSAIDNLQRMYTFKAGQSEAMD 422 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ +S + R + L++L +R V+++L + ++ LY A+G G+ Sbjct: 423 RAIEISGDLFNAARANYLEVLTAQREALDVKLELVEMRLHQQEATTSLYRALGGGW 478 >gi|160897858|ref|YP_001563440.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160363442|gb|ABX35055.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 479 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 105/408 (25%), Positives = 187/408 (45%), Gaps = 17/408 (4%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLK--WWESFNDTSLNKL 64 +L +LAGC GP Y KP M L P +S G ++ + + K WW +F+D L++L Sbjct: 13 ALCAAVLAGCASGPAYVKPAMEL-PAAYSELPGWTQARPDAEGPKGDWWTAFSDPLLDEL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 N + A A I + RA LFP+ + AS T+ + Q Sbjct: 72 GPQVAVSNQNVRLAYANYQKATAAIQAARAALFPTLGINASASRQQAGSGGPATSKSVQA 131 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W DL+GQ R ++ S A + A + A L+ L + ++ R E + + Sbjct: 132 AVSWSPDLWGQVRDSVQQSQALAQVSAATLANATLSAQVALATAVMELRVSDENARLLQR 191 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +D Y++++ + + + G +L ++++ ++ + + + H I+ L+G Sbjct: 192 AVDSYRESLRVVTEQDSAGTVPPSNLYAARTQLETAQASLVAVGMARAQYAHAIAVLVGK 251 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E MQ P+L + +G+P+ L++ RPDI E+++A A IG+A + Sbjct: 252 TPEE----MQIAPAPTMPDL-PDVPVGLPSTLLQRRPDIAAAERQMAADNAAIGVAHAAF 306 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 YPS++L+ + L N WS G L IFD G + + A + +++ Sbjct: 307 YPSVTLSAAGGLAGALGA--SNLIWSLGASLAASIFDGGARSAQLNEARAQYDASVASYR 364 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 TVL A+++VEN L+S+ ++ L AV+ +S +++ Y G Sbjct: 365 GTVLTALQDVENDLSSLRILQQQHQVLDAAVQDATQSARIALNEYEAG 412 >gi|221214528|ref|ZP_03587498.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221165418|gb|EED97894.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 552 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/466 (23%), Positives = 208/466 (44%), Gaps = 39/466 (8%) Query: 17 GCTVGPEYTKP--HMPLL----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P MP P + + + D WW ++D LN L+ Sbjct: 52 GCAVGPDYHRPDTSMPAAFKEAPAGWKVAQPAD--RADRGPWWTVYDDPQLNALIDKLNA 109 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTN------------- 115 N TI Q+ A+ + RA FP+ AS S P + Sbjct: 110 SNQTIAQSAAAYRQARALVSEARAAYFPTVGLSASGSRARTPRSSFSSGTSSSFGSSTSG 169 Query: 116 ------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 170 SISNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTYFQLR 228 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Y+++++L+ ++ QG ++ +++ + +++S ++ + Sbjct: 229 TSDALQKLLDETVQSYRQSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGVARAQ 288 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+TL+G PA+ F + +P + P+++ P+ L+ RPDI E++ A + Sbjct: 289 YEHAIATLIGEPASTF--SLPPMPLTAEPPV-TPVDV--PSTLLERRPDIAAAERRAAAA 343 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+A S +P+L+L+ S F W+ GP+L +FD G + + Sbjct: 344 NEQIGVAISAFFPTLTLSASGGFESSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTQ 403 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + ++ VL+A ++VE+ L S + + + AVE + ++++ Y+ Sbjct: 404 AARATYDQDVAAYRLAVLSAFQDVEDNLASQRILAQEIDVQRQAVESAEHALAIVTNQYK 463 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++L + L+ Q S V L A+G G+N Sbjct: 464 AGTVAYLNVLTAQTTAFTARQKLATITGQRMVSSVGLVKALGGGWN 509 >gi|325298769|ref|YP_004258686.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] gi|324318322|gb|ADY36213.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] Length = 461 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/416 (22%), Positives = 190/416 (45%), Gaps = 21/416 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 N+ L W E F D L L++ L N+ + A R+ AK + + + PS Sbjct: 53 NMGNLPWQEVFRDAKLQALIEEGLANNVDLQAAALRVEEAKVMLTAAKLSYLPSINLAPQ 112 Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISK 159 + + N T + + W++D FG+ + + +A L S Y++ + +I Sbjct: 113 GTATSMDGGNYVKAYTLPVAASWELDFFGKILNTKRGQKVAYLQSQYSE-QATRSQIICG 171 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y ++ I Q +D+YK+N+ G T++ ++ ++ A +++ + Sbjct: 172 IANTYYSLLMLDRQVEITSQTVDIYKENVRTMEAMKIAGMTTEAAVAQMRAAYHQVQASL 231 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPD 277 L++ R +++ LL Q N +P + +G+P L+ NRPD Sbjct: 232 LDLQRQVRETENSLCVLLAKTP-------QPIDRNTLDEQVMPEDLTVGVPLQLLENRPD 284 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGP--KLYLPI 334 ++ E LA + A++ YP L++ + T+ ++ N + F L PI Sbjct: 285 VKIAEMTLASAYYTTNQARAAFYPGLNITATAGWTNGSNISVANPAEFMFQALASLAQPI 344 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELH 393 F+ GK+ +N++ +++ + + +Q+T+L A +EV NAL + +DKK+ Q +L Sbjct: 345 FNNGKLVANLKVSKAEEEIARMNYQQTILEAGEEVSNALRLYDTQDKKLEHDRQQVDQLD 404 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K+++ + ++ G + L+IL ++ ++ Q ++ V LY A+G G Sbjct: 405 -KAVTYTKALFQSGDATYLEILTAQQNLLSAQLTEVSDNMQRIQAVVSLYSALGGG 459 >gi|190573522|ref|YP_001971367.1| putative outer membrane multidrug efflux protein [Stenotrophomonas maltophilia K279a] gi|190011444|emb|CAQ45062.1| putative outer membrane multidrug efflux protein [Stenotrophomonas maltophilia K279a] Length = 497 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 95/417 (22%), Positives = 192/417 (46%), Gaps = 19/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF 108 WW++ D L+ LV L + ++ A R+ A+ + + RAD PS S + R Sbjct: 67 WWKALGDAQLDALVAEGLAGHPSLDAADARLRQAQAQVGTARADELPSLSVSGGYTGLRL 126 Query: 109 IPNLKTNSTG---------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 ++ + G D + +DL+G +R E+++ +A + A+LN+ + Sbjct: 127 PESMVGSEMGGRYGGSSQVAFDFSYGVDLWGGKRAAWEAAVDGAHAATVEAQAARLNLST 186 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y D + + +A + L +K++EL+ + G S L + + EA + + + Sbjct: 187 GITQAYADLAYAWQLNDVAEEELARSQKSLELTRQRRRAGIDSDLQVRQAEARVPAAQQQ 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ ++ L+G L + Q N + + + +P++L+ RPDI Sbjct: 247 VQAAQQRIDAARTALAALVGKGPDRGLSIQRPQPLN---PVALQLPGVLPSELLGRRPDI 303 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ + +I +AK+ YPS +L G +A + +T GP L LPIF Sbjct: 304 VAARWRVEAADKQIKVAKTRFYPSFNLTALAGVVAPNVGDLLKSSSTFAYIGPALSLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+++N+ ++ + + VL+A+++V + + ++ + Q AV+ + Sbjct: 364 EGGKLRANLANTDAQYDLAVANYNQAVLDALRDVADQVNAVRSLAQQAHSQQQAVDTARS 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S LD+L + + + L+ + Q +S V L A+G G+ P Sbjct: 424 AFDLAQQRYRAGIGSYLDVLTAQSTLLQSQQQLAGLQSQQVQSSVRLSKALGGGFQP 480 >gi|157414661|ref|YP_001481917.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 81116] gi|157385625|gb|ABV51940.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 81116] gi|307747300|gb|ADN90570.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni M1] gi|315931556|gb|EFV10522.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Campylobacter jejuni subsp. jejuni 327] Length = 492 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 205/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S ++ ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSSFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|170694267|ref|ZP_02885421.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170140690|gb|EDT08864.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 527 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 108/462 (23%), Positives = 202/462 (43%), Gaps = 44/462 (9%) Query: 21 GPEYTKP--HMPLLPTQFSIG--NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GP+Y +P +P + + G ++ + D WW + D L+ L N TI Sbjct: 35 GPDYQRPAAEIPASYKEAARGWKVAQPADHEDRGAWWTIYQDPQLDALEDKLNAANQTIA 94 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLK--------------TNSTG-QLD 121 Q A+ + RA FP+ S + +NS QLD Sbjct: 95 QFAAAYRQARALVGEARAAYFPTLGLSAGATRSGSGASSSTRSTSVSRSGVSNSYDLQLD 154 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W+ DL+G R + + A A A + A+L+ + L +Y R + + Sbjct: 155 ASWEPDLWGSVGRSVNAQKAGQQGAAADLANARLSAQATLAQTYFALRALDANQKLLDET 214 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ L+G P Sbjct: 215 VAAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQASAIDNGVQRAQDEHAIAVLVGEP 274 Query: 241 ATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 A+ F S P P + +P+ L+ RPDI E+K A + +IGIA + Sbjct: 275 ASTF-------SIPPMPLTATPPAVPAQMPSALLERRPDIASAERKAAAANEQIGIAIAA 327 Query: 299 LYPSLSLNGSIA---------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +PSL+L+ S LT + F W+ GP+L +FD G ++ A + Sbjct: 328 FFPSLTLSASGGFESSVFSQLLTAPSRF------WTVGPQLAATLFDAGLRRAQTEAARA 381 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + T+++TVL A ++VE+ L S ++ + Q AVE ++++++ Y+ G Sbjct: 382 AYDQNVATYRQTVLTAFQDVEDNLASQRILEREIVVQQQAVESARQALAIVTNEYKAGTV 441 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L + E L Q S V L A+G G++ Sbjct: 442 GYVNVLTAQTTAFTAEQKLQTIAGQRMVSSVGLVKALGGGWD 483 >gi|206562647|ref|YP_002233410.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198038687|emb|CAR54648.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 480 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 96/414 (23%), Positives = 194/414 (46%), Gaps = 26/414 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP- 110 F+D L++L+ L NL + A ER+ A+ + RA L P +++A+ + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAAAERVKQAQALTVQKRAVLLPELDATAHAADARQNTPP 116 Query: 111 --NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGAGLALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVDL 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 177 RWAQQELKILQDNAKIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQIS 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ I+ G + Q+ P I +P+ + RPD+ ++ Sbjct: 237 HQLNLIAVYSGRTPESVDRLVLAQAGEI-PAPPIGAPGTLPSQALLRRPDVLTAYAQVER 295 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDK 337 A++G+AK++ YP SLN G +A ++ DN F + S PIF+ Sbjct: 296 RAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIFNA 348 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K++ Sbjct: 349 GRITADISQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLGSALAASDKAL 408 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 409 GLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|118580633|ref|YP_901883.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118503343|gb|ABK99825.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 432 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 193/413 (46%), Gaps = 25/413 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISH 106 +WW FND +LN L++ AL N + AT ++ A+ N ++ P+ + +S+S Sbjct: 22 RWWRDFNDPTLNSLIERALTTNNDLAAATIKVRRAQLNSRLTDTNITPTVTVEATSSVSR 81 Query: 107 RFIPNLKTNSTGQLDS-DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + + S+G + +++DL+G+ + ++S ++ + L++I+ Y Sbjct: 82 DLKRHTSSESSGVTGAVSYELDLWGKLASNRDASRWEAEATESDRQSTALSLIATTAKDY 141 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + ERI+ + +K ++L +K+ GA S L LV+ + S + + L + Sbjct: 142 WQIAYLNERIATTEASIAYARKCLDLVEVKYNAGAVSSLDLVQARQTLASQRAGLTDLIR 201 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP------INIGIPADLIRNRPDI 278 R N +L + Q N+ +P ++ +PA L+ RPD+ Sbjct: 202 Q-RTEARNALAIL---------FDQAPQNSVPERERLPAGPLPAVSADLPASLLGRRPDL 251 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFD 336 R E++L +A + ++ YP+ SL G++ T S + N + + G L LP Sbjct: 252 RAAEQRLRKYLANVDYTRASYYPAFSLTGTLG-TSSTSLLSFLQNPYAALGASLTLPFIQ 310 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K ++ +++ +E + +++T+ A+ +VENAL+ + ++ + L+ ++ L +K+ Sbjct: 311 WNTMKLDVAISKTEYEEAVVNFRQTLYAALSDVENALSGRVQYEEENSCLEESLSLARKA 370 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + YR G L LD + + E L + K+ + LY A+G Sbjct: 371 EELAEVRYRAGATELQLWLDGQESRRSAENSLVENRLNRLKNLMTLYQALGGA 423 >gi|330811565|ref|YP_004356027.1| fusaric acid resistance protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379673|gb|AEA71023.1| Putative fusaric acid resistance protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 490 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/466 (20%), Positives = 207/466 (44%), Gaps = 31/466 (6%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + + ++GC +G P +LP T +I + + T +WW+++ D L++ Sbjct: 16 VLTLTISGC-IGTGGIGPQSQVLPANQLATDAAIREAARDAHWPTRRWWQAYGDQQLDRW 74 Query: 65 VKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNSTGQL-- 120 V +A+Q + ++ A R+ AK + L + A++ P + G+L Sbjct: 75 VDLAMQDSPSLAMAAARVRQAKAMAGVAEAAESLQINGEATLKRHNWPTDQFYGPGELAD 134 Query: 121 DSDW----------KIDLFGQRRHIESSLANLDSA-YAQVDIAKLNVISKLIPSYID-AR 168 + W +DL+G+ R+ ++ A A+ A+L + S ++ +YI + Sbjct: 135 TTTWDNNAALGLSYALDLWGRERNASERAVDMAHASVAEARQAQLELQSNIVRAYIQFSL 194 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 H+ +R I L ++ ++L+H + G + + + +A + + L+++ + Sbjct: 195 HYAQR-DIVAATLHQQEQILDLAHKRLDGGIGTHFEVSQAQAPLPETHRQLDALDEAIAL 253 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + ++ L G E +Q+ + L +P +PA+L+ RPD+ ++A Sbjct: 254 SRNQLAALAGKGPGEGTQ-LQRPTLALDAPLKLPS--ALPAELLGQRPDVVAGRWQVAAQ 310 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 I +A++ YP++ L GS+ G ++ GP + LPIFD G+++S Sbjct: 311 ARGIDVARAGFYPNVDLVGSLGYMATGGGALEFLTGKKLTYNVGPAITLPIFDGGRLRSQ 370 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A + + +T++NA+K + + L K +V +++ ++M+ Sbjct: 371 LGEAAAGYDIAVAHYNQTLVNALKGISDQLIRRQSMDKQQAFAAESVAAAQRTYDIAMVA 430 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++G L++L+ + K + + ++ DL A+G G Sbjct: 431 FQRGLTDYLNVLNAQSLLFKQQQVQQQVQAARLSAHADLVTALGGG 476 >gi|317402028|gb|EFV82625.1| NodT family RND efflux system [Achromobacter xylosoxidans C54] Length = 506 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/360 (23%), Positives = 174/360 (48%), Gaps = 42/360 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS--SYASISHR 107 +WW+ F +LN +V+ L + + A + A+E + V + L PS + A +S + Sbjct: 69 EWWKRFGSDALNAMVEEGLANSPDLAAAERNLAGAREQLRGQVNSSLLPSVDAGADVSRK 128 Query: 108 ---FIPNLKTNS------TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVI 157 +PNL + TGQ+ + + +DLFG R S A ++ Q++ A+ ++ Sbjct: 129 RALTMPNLPQPTALYNVFTGQVQAKYDLDLFGAARFENVSRAAQVEQQAYQLESARRSLA 188 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ I + ER+++ + + L ++ + ++ G+ S+ ++ + + ++E+ Sbjct: 189 GNIVTGAITSASLAERVALTEKQVVLARQVARDTQRRYELGSASQNDALQADQDAATLEA 248 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-----IP--INIGIPAD 270 +P L ++ H ++ L+G + + P+L +P + + +P++ Sbjct: 249 SLPGLRAQWQATRHALAVLMG-----------RSPDQAPPDLAFAMIAVPEEVPVLVPSE 297 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L+ RPDI E L + A +G+A + L+PSLSL+ S+ + + G + W+ G Sbjct: 298 LLAARPDIHVAEAVLRAAAADVGVATAQLFPSLSLSASMGKGGFSWPTALSGAGSIWAVG 357 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQY----ITWQETVLNAIKEVENALTSINEDKKIV 383 L PIF G + + S+A+E+Y + +++TVL A ++V + L + D + + Sbjct: 358 ASLTQPIFHGGALLAE----RSAAKERYEAAVLQYKQTVLTAFRDVADTLAQLEADGQAL 413 >gi|161524691|ref|YP_001579703.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189350552|ref|YP_001946180.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160342120|gb|ABX15206.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189334574|dbj|BAG43644.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 515 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 99/426 (23%), Positives = 185/426 (43%), Gaps = 62/426 (14%) Query: 3 ILRAIFSLFIV-LLAGCTV-GPEYTKPHMPL------------------LPTQFSIGNSK 42 ++RA+ +V LAGC+ P P MP + QF +G Sbjct: 11 VVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGVAQQFEVGAQP 70 Query: 43 NLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSY 101 WW + +LN LV L+ + T+ A+ ++AA+E + + + + L PS Sbjct: 71 ------VSDWWTQYRSDALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLLPSID 124 Query: 102 AS------------ISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYA 147 A I P L ++ GQL + + IDLFG R SLAN +D + Sbjct: 125 AGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASYTIDLFGAARFANRSLANRVDVSAF 184 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q++ A+ + + ++ + I +I +++ L + + GA ++ + Sbjct: 185 QLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARSDALS 244 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP 262 + + +P L + H ++ L+G PA L +L++P Sbjct: 245 ARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALA-----------DLHLP 293 Query: 263 --INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 + + +P+DL+++RPDIR + L + A++G+A + L+P LSL+ S+ Sbjct: 294 EQVPVVVPSDLLQSRPDIRAADAALKAAAAEVGVATAQLFPQLSLSASMGKGGFDWPTML 353 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 G WS G L P+F G + + R A+++ + +++TVL A + V ++L ++ Sbjct: 354 SGAGAIWSVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLAAFQNVADSLAALE 413 Query: 378 EDKKIV 383 D + + Sbjct: 414 HDAQAL 419 >gi|56551694|ref|YP_162533.1| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543268|gb|AAV89422.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 471 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 112/479 (23%), Positives = 228/479 (47%), Gaps = 50/479 (10%) Query: 6 AIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDT 59 +++S FI ++LA C+ P T P+ P+Q ++ + D KWW ++ND Sbjct: 10 SLYSGFIATLILAACS--PFKT----PVPPSQVAVPSQFAQAAAGQASDISKWWLAWNDP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIP 110 +L K+++ L+ NL + A + I AK N ++ L P+ +R++ Sbjct: 64 ALTKIIEDTLKANLDLRIARDHIQEAKSNFKMTKSSLSPTIGVTGNIAGGGTDSRNRYLN 123 Query: 111 NLKTNST--------GQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKL 160 + +S+ + + W DLFG R H ++ A + AQ+ ++ + +++ Sbjct: 124 SFSNDSSDPTSVGHIAGVTASWDADLFGAR-HADAKAAKAEVLGQEAQLHQIQMAIAAEV 182 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y + ++R+++ Q L L + + +F G + + L+ +I + S P Sbjct: 183 ASYYTGIQCLRKRLALIDQRLILLENLKSYTQARFNAGQATLSDIKGLDVQINILHSYRP 242 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIR 279 LE + ++ +I+ +LG E + + S + P P G +P+ ++ RPDI Sbjct: 243 DLESAIAASLRHIA-ILGGKTPENVE-IAISSESVTP----PAPAGELPSTVLNRRPDIA 296 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 E + ++ ++ AK+DL P L +G I + + F N+ YLPI Sbjct: 297 AAEANINAALNRLKSAKADLLPRFGLQFFGGDGRIRFSGLSGFS--NSGGIMALTAYLPI 354 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G++ ++I ++ E + + +L+A+ EVENA + + K +T+L A+ + Sbjct: 355 FTAGRVHAHIALEDAKLDEAVAFYDKKLLSALTEVENAYQARSSQDKRITQLSQALATTE 414 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK--RQLAKSYVDLYIAIGSGYN 451 +++++ Y+ G+++L ++L E KV+ D S+ + +Q + ++LY A+G G++ Sbjct: 415 QNITVEQGLYQGGKHTLQNVL--ETKLDKVDKDDSLIQTIQQQQMATINLYYALGGGWS 471 >gi|262369362|ref|ZP_06062690.1| outer membrane protein [Acinetobacter johnsonii SH046] gi|262315430|gb|EEY96469.1| outer membrane protein [Acinetobacter johnsonii SH046] Length = 485 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 93/403 (23%), Positives = 190/403 (47%), Gaps = 12/403 (2%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-- 113 F D L +++++AL N + AT I A++ + P+ AS S L Sbjct: 61 FADQRLVQVIELALANNRDLRTATLNIQRAQQAYQISENNQLPTIGASGSVLRQDTLSSK 120 Query: 114 ---TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T + G + +++D +G+ R + +++L + + + D ++++I ++ +++ Sbjct: 121 PMTTYNVGLGVTAYELDFWGRVRSLKDNALDSYLATQSARDATQISLIGQVAQAWLSYSF 180 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + +A Q L ++ L+ +F G S++ + + + +++ +D+ + Sbjct: 181 ANANLKLADQTLKAQLESYNLNKKRFDVGIDSEVPVRQAQISVETARNDVANYKTQLAQA 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ L+G P L Q Q + G+P+DL+ NRPD+R E +L+ + Sbjct: 241 QNLLNLLVGQPVPANLLSPQPVKRITQS---TALTAGLPSDLLNNRPDVRAAEYQLSAAG 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG AK+ LYP++SL G+ + F WS GP L +PIFD G ++N++ Sbjct: 298 ANIGAAKAQLYPTISLTGTAGYASTDLSDLFKSGAFVWSLGPSLDIPIFDWGTRRANVKI 357 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +E+ + +++T+ A +EV +AL + + V+ + LS +R Sbjct: 358 SETDQKIALSDYEKTIQTAFREVNDALAVRENIGDRLAAQRRLVDATNTTYKLSTARFRA 417 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L +LD +R + E L + ++ + V++Y +G G Sbjct: 418 GIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQVEVYKTLGGG 460 >gi|148556742|ref|YP_001264324.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148501932|gb|ABQ70186.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 490 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 112/478 (23%), Positives = 201/478 (42%), Gaps = 42/478 (8%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I RA L + LA C+ P Y +P + G + +D + E F D L Sbjct: 2 IRRAAALLTMTALAACSFEPAYHRPAPAVPAALPDAGQGEAPARLD---YREIFRDPRLV 58 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------------- 105 L+ AL N + A + +A+ + RADL P S Sbjct: 59 TLIDRALANNQDLKAALANVRSARALVTVARADLLPQLDGSAGLTIGDSSNETRGGTGSG 118 Query: 106 -------HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNV 156 +T L W+IDLFG+ R + ++ + L S AQ A+L++ Sbjct: 119 ATGGSGNGASTGGRRTTYNADLGVSWEIDLFGRLRSLNNAAFDTYLGSEAAQRG-ARLSL 177 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ + +Y+ + ++IA + +++EL+ G + L + E + E Sbjct: 178 VAGVANAYLALAADRSLLAIATETRTSAARSVELTQALLKGGVAPRTDLRQAETVLAQAE 237 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +D +LE + + + + L+G + L +S + Q + G+ + ++ RP Sbjct: 238 ADEASLETAVAQDRNALQLLVGAAIEDDLLPASIESLDGQ---LAEVPAGLDSSILLRRP 294 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 D+ E L + A+IG A++ +P + L G + + F G WS P LP Sbjct: 295 DVVESEYALRAANARIGAARAAFFPRIGLTALAGFASSALSSLFQGSAFTWSVAPSATLP 354 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAV 390 IFD G N+R +++ +Q+ + +A ++V +AL +I+ TKL + Sbjct: 355 IFDGGANLGNLRYSKAQRDLALANYQKAIQSAFRDVADALARRATIDRQLAASTKLDASA 414 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + S+ L+ YR+G L++LD +R L+ A+ A++ V LY A+G Sbjct: 415 ---RDSLFLANARYREGIDPYLNMLDAQRTAYGAARTLAQARLLKAQNLVTLYQALGG 469 >gi|170700343|ref|ZP_02891354.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170134730|gb|EDT03047.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 482 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 197/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F+D L++L+ L NL + ATER+ A+ + RA L P +++AS + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAATERVKQAQALTVQKRAALLPELDATAHASDARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGIG-LALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVD 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQDNAAIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQI 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P P + P+ + RPD+ ++ Sbjct: 236 AHQLNLIAVYSGRTPESVDRLVLAQAGAIPAPPAGSPTTL--PSQALLQRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLADGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADITQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLDSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ +R+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDADALNQVRREHALAAVALYRSLGGGWS 462 >gi|289671372|ref|ZP_06492447.1| outer membrane protein OprN precursor [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 496 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/472 (23%), Positives = 209/472 (44%), Gaps = 48/472 (10%) Query: 22 PEYTKP----HMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNLTIL 76 P YTKP + + +++ L WWE +D L +LV AL + + Sbjct: 24 PNYTKPPAVADAAMQAPALHRASGADVVAAAPLNHWWEELHDPLLTQLVTQALADSPNLR 83 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIP-------------------------- 110 A R+ A + RA+ P AS + + Sbjct: 84 AAQARLRANRALAQQRRAERLPKLNASALYAYAEPPQTIVDTLGGLQQGQPGQPPAAGNQ 143 Query: 111 --NLKTNS--TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NL+ + D+ W++D FG+RR E +LA ++ A++ A++ + +++ Y+ Sbjct: 144 ALNLEETQIYSAGFDASWELDFFGRRRRAAEGALAQAQASEAELADAQVQLAAEVGQVYL 203 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R + R++IA LD +++++L + QGA S L + ++ +++ ++ LE Sbjct: 204 NYRGLQARLAIADTNLDKIRQSLQLVQQRRGQGAASDLQVEQIATQVQQQQAQRLPLEMQ 263 Query: 226 FRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI--PADLIRNRPDIRYQE 282 + ++ ++G P + Q + QP +P + + LIR RPD+R E Sbjct: 264 AQEAQDQLALMVGREPGA-----LDAQLSTPQPLPMLPTQVRVDDAGALIRRRPDVRKAE 318 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGK 339 ++LA S A+IG A + +P +SL G ++ S +N+ P L IFD GK Sbjct: 319 RELAASSAQIGEAFNGYFPQVSLLGGLSWVA-GSPSDFNSDALTTLAVPMLRWSIFDFGK 377 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + +A + + ++ VL A+++ +AL +K + + A +S L Sbjct: 378 TRAQVEQARAGNAGRTAAYEGAVLAALQDANSALARFGSARKQLVVARQAEASATRSAGL 437 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S +D+LD++R + + A+ QL +YV L ++G G++ Sbjct: 438 MQQRRDAGATSSIDLLDVQRQQLSAQDAAAQAQVQLLVNYVALQKSLGLGWS 489 >gi|255536529|ref|YP_003096900.1| OprM-like outer membrane efflux protein [Flavobacteriaceae bacterium 3519-10] gi|255342725|gb|ACU08838.1| OprM-like outer membrane efflux protein [Flavobacteriaceae bacterium 3519-10] Length = 481 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 204/461 (44%), Gaps = 29/461 (6%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 V+L+ C +Y +P L F ++ I T+ W E F D L + ++ L Sbjct: 27 FVVLSSCMARQKYERPAEVLNENLFRTDMLDQDSTTIATVTWREIFTDPLLQQYIQKGLD 86 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL---------- 120 NL I A + I A + +A P+ S+ F GQL Sbjct: 87 NNLDIRIALQNIAVADAYLKQSKAAYQPTVSVGPSYTFQTQSLNTQLGQLGGGQRRYLDI 146 Query: 121 -----DSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 D W D++G+ + E + A + A K ++++ + +Y F E+ Sbjct: 147 FDLSGDISWDADIWGRMKAEERARAAEYFGSVATHQAVKSDLVAAIASAYYQLLTFDEQK 206 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I ++ + L KN+E + G +++++ + EA + + ES + ++ + + +S Sbjct: 207 RIINETITLRNKNLETTRALKEAGTVTEVAVQQSEALVFNAESLLIDIDTQIELLENAMS 266 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL P+ + Q P Y +G A+L+ NRPD+ E L + Sbjct: 267 YLLAVPSQKIARTTLDQQK--MPESY---KLGFSANLLANRPDVMAAEYNLISAFELTNA 321 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK+ YPSL ++GS L D+ F + + L P+ +K +I++N + ++ Sbjct: 322 AKAQFYPSLRISGSGGLQSLAIDDLFSANSLFANVVGGLVQPVLNKRQIRTNYEVSLANK 381 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS--MINYRQGRY 409 + Y+ +++T+L A +EV +AL + + + + ++KS+ S ++NY Y Sbjct: 382 ERAYLNFRKTLLTAGREVSDALKVYESQDRFIELKRSELTAYRKSVEFSQELVNYGMANY 441 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++L+ + E+++S A+ ++ V+LY ++G G+ Sbjct: 442 --LEVLNASVNSLNAELNISNAEYNKMRAGVELYQSLGGGW 480 >gi|218700010|ref|YP_002407639.1| putative outer membrane channel protein of an efflux system [Escherichia coli IAI39] gi|218369996|emb|CAR17770.1| putative outer membrane channel protein of an efflux system [Escherichia coli IAI39] Length = 457 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVGVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|325269376|ref|ZP_08135993.1| FusA/NodT family multidrug resistance protein [Prevotella multiformis DSM 16608] gi|324988297|gb|EGC20263.1| FusA/NodT family multidrug resistance protein [Prevotella multiformis DSM 16608] Length = 470 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 24/417 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 + L W F D L L++ AL N ++ A I+ A++ + + + PS Sbjct: 63 DFGNLPWRSVFTDPQLQVLIEKALDNNPDLINAALNIDIAEQQVKTSKLAFLPSVVFAPT 122 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKL 160 +ISH T + T + + W +DLFG+ R + S L Q+ +++V + L Sbjct: 123 GTISHFGSHASPTQAYTLPVSASWDVDLFGRLRSAKKSAQML---LIQMRDYQVSVQTTL 179 Query: 161 IPSYIDARHFKERISIAHQILD----LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I + + + + QI+D L K ++ L+ G S+ EA S++ Sbjct: 180 ICNVANLYYTLLMLDRQQQIVDDMSGLTKNTWDMMKLQMDYGRARSTSVQSAEAAYYSVQ 239 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + + R + +S LLG PA + + S + Q +L + GI L+ NR Sbjct: 240 TQAADIRRQIRETENALSLLLGEPA----QGIARGSLDRQ-HLPSSFSGGIGVQLLSNRA 294 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPI 334 D+ E LA + A+S YP+L+++ + A T+ N PG S L P+ Sbjct: 295 DVHANEMALAQCFYNVQEARSRFYPALNISPTGAWTNSNGMVNPG-KLLLSVVGSLTQPV 353 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F +G++K+ +R A+ ++ Y TWQ ++L A EV NAL + N + + + + K Sbjct: 354 FMRGQLKAGLRVAQDKYRQVYNTWQNSILKAGSEVSNALVAYNSAHEKEQLQEQQIGVLK 413 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 K++ + + Y Q + L+++ +R+ E+ S K Q K + V+LY A+G G Sbjct: 414 KNVDDTRLLYAQSSSTYLEVITAQRSLLNAEI--SQVKEQFTKLQAIVNLYNALGGG 468 >gi|254499096|ref|ZP_05111787.1| RND efflux system, outer membrane lipoprotein, NodT family [Legionella drancourtii LLAP12] gi|254351682|gb|EET10526.1| RND efflux system, outer membrane lipoprotein, NodT family [Legionella drancourtii LLAP12] Length = 503 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 116/497 (23%), Positives = 205/497 (41%), Gaps = 63/497 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------------NIDTLK 51 +I L LL+ C VGP Y +P + P +F K + ++D + Sbjct: 12 SIVPLITCLLSSCLVGPNYVRPKVVGSP-EFKEAKGKMVAGPKNKNWKPIKPQDDLDRGE 70 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 WW+ F D LN L + N I A + + + RA FP+ Sbjct: 71 WWKIFKDPVLNDLEEQLNHYNQNIANAQATYHQSLAIVDEARASFFPTISSTFSLLRQRQ 130 Query: 100 -----------------SYASISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLAN 141 A+ + T+ TG L++ W+ D++G RR +E+ + Sbjct: 131 GGGATSFISSSGGSTSVGTAATGSQSTARTSTSYTGILNASWEPDIWGLVRRTVEADRSL 190 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +S A + + +L+ L Y + R + + YK ++L+ ++ G S Sbjct: 191 AESNAALIGVTRLSAQGSLAQYYFELRTLDKNQRFLDNTVKSYKGILQLTINQYKSGVAS 250 Query: 202 KLSLVKLEAEIKSIESDI---PTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQP 257 + +V+ +++++ ++ L + H I+ L+G P L +M Q+ P Sbjct: 251 QADVVQARSQLETAQASALNNGILRGQYE---HAIAVLIGRPPAYLSLKFMPLQTK--PP 305 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 IP+ + P+ + RPDI E+ L A IG+A + +PSLSL GS A NSF Sbjct: 306 T--IPLTV--PSVWLERRPDIAQSERLLQQYSALIGVAVAAYFPSLSLTGS-ATASGNSF 360 Query: 318 PGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + WS G +L IFD G + +R A+++ Q +++ VL A ++VE+ L Sbjct: 361 HKLIHTPSVGWSAGLQLAETIFDGGLRAATVRAAKNAYVAQLAAYRQVVLTAFQDVEDNL 420 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 S+ ++ A + ++ L + Y+ G + +L + E + Sbjct: 421 ISLRILREQSVVQNKAAASARLALKLVLNQYKAGTVNYSSVLTAQITAFAAEQAANNVDG 480 Query: 434 QLAKSYVDLYIAIGSGY 450 L S V L A+G G+ Sbjct: 481 LLMTSAVGLIKALGGGW 497 >gi|221198021|ref|ZP_03571067.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221204421|ref|ZP_03577438.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221175278|gb|EEE07708.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221181953|gb|EEE14354.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 512 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 61/413 (14%) Query: 15 LAGCTV-GPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 LAGC+ P P MP + QF +G WW Sbjct: 24 LAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGIAQQFEVGAQP------VSDWWTQ 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYAS----------- 103 + +LN LV L+ + T+ A+ ++AA+E + + + + L PS A Sbjct: 78 YRSDALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLLPSIDAGGQAARQRALGV 137 Query: 104 -ISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKL 160 I P L ++ GQL + + IDLFG R SLAN +D + Q++ A+ + + + Sbjct: 138 PIRALGAPTLLYDTFVGQLQASYTIDLFGAARFANRSLANRVDVSAFQLESARRALAANI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I + +++ L + + GA ++ + + + +P Sbjct: 198 VTAAITVSVLDAQIDTSERLVALANDQARDAERRHALGAAARSDALSARQSADTFAASLP 257 Query: 221 TLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + H ++ L+G PA L +L++P + + +P+DL++ Sbjct: 258 ALRQQRDSARHALAVLVGRTPDRPPAGIALA-----------DLHLPEQVPVVVPSDLLQ 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKL 330 +RPDIR + L + A++G+A + L+P LSL+ S+ G WS G L Sbjct: 307 SRPDIRAADAALKAAAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIWSVGASL 366 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P+F G + + R A+++ + +++TVL A + V ++L ++ D + + Sbjct: 367 TQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLAAFQNVADSLAALEHDAQAL 419 >gi|331646622|ref|ZP_08347725.1| putative outer membrane efflux lipoprotein [Escherichia coli M605] gi|330911162|gb|EGH39672.1| RND efflux system, outer membrane lipoprotein CmeC [Escherichia coli AA86] gi|331045374|gb|EGI17501.1| putative outer membrane efflux lipoprotein [Escherichia coli M605] Length = 457 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEITTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMVSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|299145133|ref|ZP_07038201.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] gi|298515624|gb|EFI39505.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] Length = 458 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 109/460 (23%), Positives = 216/460 (46%), Gaps = 47/460 (10%) Query: 15 LAGCTVGPEYTKPH--MP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + +Y KP +P L + ++ +L N+D W E F D L L+++ LQ Sbjct: 19 LSGCGIYTKY-KPATIVPDHLYGEEVVAEDTASLGNMD---WRELFTDPYLQSLIEVGLQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWK 125 N A R+ A+ ++S + P+ +A + + T+ Q + + W+ Sbjct: 75 TNTDYQSAQLRVEQAQAALMSAKLAFLPA-FALSPQGTVSSFDTHKATQAYSLPVTASWE 133 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQIL 181 +D+FG+ R+ + L YAQ + + V ++L+ +Y E++ ++ Q Sbjct: 134 LDVFGRMRNAKKQAKAL---YAQSEDYRQAVRTQLMTGIANTYYTLLMLDEQLDLSRQTE 190 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YP 240 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 191 TAWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETP 250 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + KQ F + +IGIP ++ +RPD+R E+ L + A+S Y Sbjct: 251 RNYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFY 304 Query: 301 PSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 PS++L+GS T+ PG + G L P+F++G++ + R A + +E + Sbjct: 305 PSITLSGSAGWTNSAGAMIINPGKFLASAVG-SLTQPLFNRGQVVAQYRIARAQQEEAAL 363 Query: 357 TWQETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRY 409 +Q+T+LNA EV +AL + ++ K+I +T LQ A+ +S +L M G Sbjct: 364 GFQQTLLNAGSEVNDALIAYQTSQGKRILLDKQITSLQTAL----RSTTLLM---EHGNT 416 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L ++ ++ + +S ++LY A+G G Sbjct: 417 TYLEVLTSRQSLLSAQLSQTANHFTEIQSLINLYRALGGG 456 >gi|166712152|ref|ZP_02243359.1| cation efflux system protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 482 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 106/478 (22%), Positives = 194/478 (40%), Gaps = 50/478 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLL---------------------PTQFSIGNSKNLINIDT 49 V LA C VGP++ +P P QF G Sbjct: 1 MAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFEPGQEV------P 54 Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---- 105 WW +F+ LN +V+ AL+ N + A + A++ + + R P + + Sbjct: 55 AAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQ 114 Query: 106 -HRFIPNLKTN-------STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNV 156 + +P T QL + +D+FG RR +E++ A + Q D A L++ Sbjct: 115 RNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSL 174 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I + ++ A + L ++ L+ + T GA ++ + + Sbjct: 175 TANVVNAAIGEAAVRAQLQAARAQVALAEQLCTLTERQQTLGAVGTAQVLAQRTALAQAQ 234 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRN 274 + +P LEK ++ L G +E ++ + L +P + + +P+ L+ Sbjct: 235 ATVPPLEKQLEQQRTLLAILGGQVPSE----AADEAFTLE-TLQLPAQLPLSLPSQLVEG 289 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLY 331 RPDIR E + + A IG+A + PS++L+ + + F NT WS L Sbjct: 290 RPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSLL 349 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + R A++ + ++ VLNA EV NALT++ D + + A Sbjct: 350 QPLFHGGALAHQQRAAQAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRACADAQA 409 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++++ G + D+L ++A + A+ V LY A+G G Sbjct: 410 LAGRTLAAVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 467 >gi|293409688|ref|ZP_06653264.1| conserved hypothetical protein [Escherichia coli B354] gi|291470156|gb|EFF12640.1| conserved hypothetical protein [Escherichia coli B354] Length = 457 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 99/462 (21%), Positives = 216/462 (46%), Gaps = 21/462 (4%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +LR ++L AGC ++ P Y+ P P+ T I+ D W + +D L Sbjct: 1 MLRRSLIFLMLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTG 118 ++V IAL N + +A I++A+ A LFP+ A++S R + N T +T Sbjct: 58 QQVVTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTA 116 Query: 119 QLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + D S + +DLFG+ + + + L S + + +L +I+++ +++ Sbjct: 117 EADGTVSSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSN 175 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A + + + ++++ + G + + + + + + + + + + + + Sbjct: 176 LALAKETMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNAL 235 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L G E L + + Q + + G+ +D++ RPDI+ E L + A IG Sbjct: 236 NLLAGTTLEENL--LPGTLESLQEQMISLVPAGVSSDVLLRRPDIQEAEHNLKSANADIG 293 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAES 349 A+++ +P++SL S + D + +H WSF P + LP+F G + +R AE+ Sbjct: 294 AARANFFPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEA 352 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G Sbjct: 353 QKRGLIATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVG 412 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +L +R+ + +L + + + L+ ++G G + Sbjct: 413 DYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|152980931|ref|YP_001355168.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] gi|151281008|gb|ABR89418.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] Length = 473 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/463 (22%), Positives = 206/463 (44%), Gaps = 38/463 (8%) Query: 13 VLLAGCT-----------VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +LLAGC V P++ +P + ++ ++ T WW SF + L Sbjct: 11 LLLAGCATQATQQTLVPEVAPQWRQPQANV--------DATGTTSVLTRDWWRSFGSSEL 62 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNST 117 + L++ Q+ I A R+ A+ A L P + A+ + R + +T Sbjct: 63 DSLLETVQVQSYDIAAAVARVTQAQATATIAGAALLPELNGNFGATRNGRLGGDGNGTAT 122 Query: 118 GQ-----LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 G L + +++D +G+ R + +S+ A L +A D L V + + S++ + Sbjct: 123 GTVYQAGLSATYELDFWGRNRAVRDSARAGLRAAEFDRDTVHLTVTAGVASSWLQTVGLR 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER++IA + ++ +++ + GA + L L + + + + + ++ Sbjct: 183 ERVAIADLSVASAQRLLDVIESRARAGAANPLELAQQRGVLAAQMRARAAIRQQAEDSLT 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LLG + L + N Q + G+PADL+ RPDI E +L+ + A Sbjct: 243 TLAVLLGRNPS-LLVLAGTELNKLQAPAVVA---GLPADLLVRRPDIARAEAQLSGADAN 298 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 I A++ + P +SL G I + + N +S L PIF+ G++ + A + Sbjct: 299 IIAARAAMLPRISLGGDITAGSNRVSSVFDNPVYSLAAGLAAPIFNAGRLAAGRDLALAQ 358 Query: 351 AQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E ++ ++ A +VE AL ++ D + + + + + +++ +L+ YR G Sbjct: 359 REELLANYRRAIVAAFGDVEVALNAVAGIDAQRIAQ-EEELRQAQRAFNLAESRYRAGAE 417 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGYN 451 + L +LD +R T D + R L ++ V LY A+G G+ Sbjct: 418 TSLTLLDAQR-TLYAAQDAAAQLRTLRLQAAVSLYKALGGGWQ 459 >gi|194365065|ref|YP_002027675.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194347869|gb|ACF50992.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 498 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 195/417 (46%), Gaps = 19/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF 108 WW++ D L+ L+ L + ++ A R+ A+ + + RAD PS S + R Sbjct: 67 WWKALGDPQLDALISEGLAGHPSLDAADARLRQAQSQVGTARADRLPSLSVSGGYTGLRL 126 Query: 109 IPNLKTNSTG---------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 ++ + G D + +DL+G +R E+++ +A + A+LN+ + Sbjct: 127 PESMAGSEMGGHYAGSSQVAFDFSYGVDLWGGKRAAWEAAVDGAHAATVEAQAARLNLST 186 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y D + + +A + L +K+++L+ + + G S L + + EA + + + Sbjct: 187 GIAQAYADLAYAWQLNDVAEEELTRSQKSLQLTRQRRSAGIDSDLQVRQAEARVPAAQQQ 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ ++ L+G L + Q+ N + + + +P++L+ RP+I Sbjct: 247 VLAAQQRIDAARTALAALVGKGPDRGLSIQRPQALN---PMALQLPGVLPSELLGRRPEI 303 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ + +I +A++ YPS +L G +A + +T GP L LPIF Sbjct: 304 VAARWRVEAADKQIKVARTKFYPSFNLTALAGVVAPNVGDLLKSSSTFAYIGPALSLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+++N+ ++ + +TVL+A+++V + + ++ + Q AV+ + Sbjct: 364 EGGKLRANLANTDAQYDLAVANYNQTVLDALRDVADQVNAVRSLAQQSNAQQQAVDTARS 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S LD+L + + + L+ + Q ++ V L A+G G+ P Sbjct: 424 AFDLAQQRYRAGIGSYLDVLTAQSTLLQSQQQLAGLQSQQVQTSVRLSKALGGGFQP 480 >gi|188534891|ref|YP_001908688.1| RND efflux system, outer membrane lipoprotein [Erwinia tasmaniensis Et1/99] gi|188029933|emb|CAO97817.1| RND efflux system, outer membrane lipoprotein [Erwinia tasmaniensis Et1/99] Length = 461 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 113/454 (24%), Positives = 207/454 (45%), Gaps = 27/454 (5%) Query: 16 AGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQN 72 +GC VGP+Y +P P+ L + + G + D LK WW + D +L+ L++ N Sbjct: 16 SGCAVGPDYQRPDAPMSLHYKQAKGWHEARPQDDVLKGEWWVRYQDATLSGLLRQVQISN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-------QLDSDWK 125 + Q A + R+DL+PS A+ S + G Q + W+ Sbjct: 76 QNVAQYQALYRQALALAAASRSDLYPSVSATGSATRSATAGSGQGGISNGHQLQASASWE 135 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D++G+ RR +E A+ D++ A++ L+ S L +Y R RI + + +D Y Sbjct: 136 LDIWGKLRRTLEEDRASADASAAELANITLSAQSTLAQNYFQLRILDRRIGLYQRSIDAY 195 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ + + ++ G+ S+ +L + + ++S + L H I+ L+G EF Sbjct: 196 QRYVTVIDNQYHAGSESRAALAQAQNLLESARASALDLNWQRAQLEHAIAVLIGKTPAEF 255 Query: 245 LHYMQKQSNNFQP-NLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 S P +P I +PADL++ RPDI E+ +A + A +G+A + YP Sbjct: 256 -------SLAAAPLKATLPDIPSALPADLLQRRPDIAQAERTVAAANAAVGVAIAGYYPD 308 Query: 303 LSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 L+L+ S + S P N WS GP L + D G + + +A ++ + Sbjct: 309 LTLSASGGFSSSVLHNLISLP--NRVWSLGPSLSGTLLDFGATSAKVEQARAAYDADVAS 366 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++TVL ++EVEN L ++ + + Q A ++S ++ Y+ G LD+ Sbjct: 367 YRQTVLTGLQEVENYLVELHTLRDEMLAQQRATAAAQESARVTRNQYQAGMIDYLDVATT 426 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E + + +L + + V L +A+G + Sbjct: 427 ENTSLSQQQNLLQLQSTQWVTSVKLIVALGGDWG 460 >gi|330830470|ref|YP_004393422.1| outer membrane efflux protein [Aeromonas veronii B565] gi|328805606|gb|AEB50805.1| Outer membrane efflux protein [Aeromonas veronii B565] Length = 454 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/446 (21%), Positives = 200/446 (44%), Gaps = 15/446 (3%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 + L+GC+ Y +P + + PT ++ + WW F+D L+KLV+ L Sbjct: 9 LCMALSGCSQHSTYQRPELTIAPTWQQAEGAQ--LATQAGPWWREFHDPQLDKLVEAVLA 66 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT----NSTG-QLDSDWK 125 N + A + +A+ +L PS +I +LKT NS G L ++ Sbjct: 67 ANPDMRVAALKFKSARLGSEQADTNLTPSVNGTIGASGNKDLKTGKGTNSLGPSLSLSYE 126 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DL+G+ + A+ ++A ++ D+A +L +I + Y + I++ Q L Sbjct: 127 VDLWGKLASVRDQ-ASWEAAASEQDLASTRLLLIGNTLEQYWQLGYLGSAIALGEQQLAN 185 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + +L+ K+ GA ++L L + ++ ++++ +L+ + + LLG + Sbjct: 186 LARTEQLTQTKYQAGAITRLDLAQARQQLAGKQAELASLKAQQEQARNALRLLLGRSSGP 245 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + P L +GIPAD++ RPD++ E +L ++AK ++ YPSL Sbjct: 246 LEYAPASLAKQTIPEL----AVGIPADVLARRPDVKAAELRLRKTLAKGDEIRTSFYPSL 301 Query: 304 SLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 +L GS + D + N + G L LP + + + I +E Q +++ + Sbjct: 302 TLTGSASTASDRLAQVLQNPVGTLGASLALPFLEYNRTQLAIESSELDYQIAETEFRKQL 361 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A+ EVE+ L + + ++ + LQ + +++ L+ ++ G + LD + Sbjct: 362 YTALVEVEDNLAARHYGQQRLDYLQEQLSYAQEAERLAKARFQAGATGVQAWLDEQNRLW 421 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L +++ + +Y A+G Sbjct: 422 DAQQSLLAQQKEQLTTTAKIYRALGG 447 >gi|18496808|gb|AAL74246.1|AF466820_3 CmeC [Campylobacter jejuni subsp. jejuni 81-176] Length = 492 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKETNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNIKYSYANSIVDVIKAFGGGF 469 >gi|172062662|ref|YP_001810313.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171995179|gb|ACB66097.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 480 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 99/416 (23%), Positives = 196/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F+D L++L+ L NL + ATER+ A+ + RA L P ++ AS + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAATERVKQAQALTVQKRAALLPELDATARASDARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +YID Sbjct: 117 PLGYVRQAGIG-LALSWSPDVFGGERLDLLAAQAGLVGQQHAEDAMRLALAADAASAYID 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQDNAAIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQI 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P P + P+ + RPD+ ++ Sbjct: 236 AHQLNLIAVYSGRTPESVDRLVLAQAGAIPAPPAGSPATL--PSQALLRRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLADGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADITQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLDSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ +R+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDSDALNQVRREHALAAVALYRSLGGGWS 462 >gi|115360227|ref|YP_777365.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115285515|gb|ABI91031.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 484 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 196/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F+D L++L+ L NL + ATER+ A+ + RA L P ++ AS + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAATERVKQAQALTVQKRAALLPELDATARASDARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGIG-LALSWSPDVFGGERLDLLAAQAELVGQRHAEDAMRLALAADAASAYVD 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQDNAAIRRHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQI 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P P + P+ + RPD+ ++ Sbjct: 236 AHQLNLIAVYSGRTPESVDRLVLAQAGAIPAPPAGSPTTL--PSQALLRRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLADGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADITQSESRMRESELGLRQTMLQALREVEDARANLVSSDEAARRLDSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ +R+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDSDALNQVRREHALAAVALYRSLGGGWS 462 >gi|34499293|ref|NP_903508.1| outer membrane drug efflux lipoprotein [Chromobacterium violaceum ATCC 12472] gi|34105144|gb|AAQ61500.1| probable outer membrane drug efflux lipoprotein [Chromobacterium violaceum ATCC 12472] Length = 476 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 120/458 (26%), Positives = 206/458 (44%), Gaps = 33/458 (7%) Query: 20 VGPEYTKPHMPLLPTQF-SIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTI 75 VGP+Y +P LP Q+ S D L WW F D LN+L AL ++ T+ Sbjct: 18 VGPDY-RPPASELPAQWKSDAGWLPAAPADALPKRDWWRMFGDEGLNRLEADALARSPTL 76 Query: 76 LQATERINAAKENILSVRADLFPSS----YASISH----RFIPNLKTNSTGQLDSDWK-- 125 A R++ A+ A P++ AS S R + + ++ + SD K Sbjct: 77 QLALARLDQAQAQSRIRGAAALPAASLGAAASRSRVSADRPLSSYGASNASAVQSDLKPM 136 Query: 126 ------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ID G+ RR IES+ A + A + +L + ++L +Y+ R E I + Sbjct: 137 LSVSYEIDWLGRVRRDIESARAGAEQAASDRANVELLLTAQLASAYLQLRQEDEEIRLLD 196 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ILD ++ +EL+ ++ G S + A + + L R N ++TL G Sbjct: 197 GILDAQQRVLELTRIRHLAGLASAGDEAQQAAASAASRAQRELLLNQRRANEDLLATLSG 256 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 PA F + ++ P + G P+DL++ RPDI E+ +A + A+IG+AK+ Sbjct: 257 APAPSF-----RLASGSLPAALPALPNGAPSDLLQRRPDIASAERAMAAANAQIGVAKAA 311 Query: 299 LYPSLSLN----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P L+L GS + F W G + +FD GK ++ + A + + Sbjct: 312 YFPQLTLAPTYLGSESTGLGKLFSTPALIWGVGLQATQTLFDNGKARAGVDYAAAGYRAA 371 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++TVL A++E ++AL S++ + + A K+ ++ + YR+G S L + Sbjct: 372 LAAYRQTVLQALQEAQDALGSLHGLDQARRQQDEAARNQDKAYAVIQLRYREGLDSALTL 431 Query: 415 LDIERATAKVEVDLS-IAKRQLAKSYVDLYIAIGSGYN 451 ++ + L+ + QLA S V L A+G G+ Sbjct: 432 ASARQSQLAAQRTLAQLRGAQLAAS-VSLLKALGGGWQ 468 >gi|91789096|ref|YP_550048.1| RND efflux system outer membrane lipoprotein NodT [Polaromonas sp. JS666] gi|91698321|gb|ABE45150.1| RND efflux system, outer membrane lipoprotein, NodT [Polaromonas sp. JS666] Length = 480 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/426 (23%), Positives = 192/426 (45%), Gaps = 34/426 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTI----------LQATERINAAKENILSVRADLFPSS 100 +WW F D LN L+ ALQ + ++ E +AA L+ + DL Sbjct: 56 EWWRDFGDEQLNGLIAQALQSSPSLKLAQARLARARAVMEVADAATLPQLNGQIDLTRQR 115 Query: 101 Y---ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 Y ++ ++ + T QL++ W++D FG+ R ++++L + +A A A++ + Sbjct: 116 YTANGAVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGSAHAAEADAQAARVLL 175 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 S + SY E+ +A + L ++ ++L + G ++L L + E + Sbjct: 176 ASNVARSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEAR 235 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG----IPADLI 272 + T+++ + + ++ L+G + L P L N+ IPADL+ Sbjct: 236 LQLETVQEQIALTRNALAALVGQAGSSALA-------QNPPALAAIKNVALTSSIPADLL 288 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPK 329 R DI ++ + + AK+ YP+++L G ++ + W GP Sbjct: 289 GRRADIAAARWRVEAASKDVVNAKTQFYPNINLVAFAGFSSIGLGRLLDAGSQQWGVGPA 348 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G++++N+R + ++ V++A+++V + + S + + + A Sbjct: 349 LRLPIFDAGRLRANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGRQQAEQRSA 408 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAI 446 E + + +++ YR G + L++L E + ++ VDL A R L + V L A+ Sbjct: 409 QEAAEGAYEIAVQRYRAGLGNYLNVLTAETSVLTQRRLAVDL--AARAL-DTQVALMRAL 465 Query: 447 GSGYNP 452 G GY P Sbjct: 466 GGGYTP 471 >gi|121612467|ref|YP_001000076.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005034|ref|ZP_02270792.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 81-176] gi|87250124|gb|EAQ73082.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 81-176] Length = 492 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNIKYSYANSIVDVIKAFGGGF 469 >gi|78047662|ref|YP_363837.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036092|emb|CAJ23783.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 494 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/468 (22%), Positives = 195/468 (41%), Gaps = 34/468 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------------KWWESFN 57 V LA C VGP++ +P +P + +++ D WW +F Sbjct: 15 VSLAACAVGPDFQRPALPAADRYTANALPATIVDADAAHGGAQQFEPGQDVPAAWWRAFG 74 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIP 110 LN +V+ AL+ N + A + A++ + + R P +S S P Sbjct: 75 SPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRDSVVPAP 134 Query: 111 NLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + ++ T QL + +D+FG RR +E++ A + Q D A L++ + ++ + Sbjct: 135 DAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAA 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + ++ A + + ++ L+ + GA ++ + ++ +P LEK Sbjct: 195 IGEAAVRAQLEAARAQVAIAEQLCTLTERQQALGALGAAQVLAQRTALAQAQAAVPGLEK 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + +LG + Q +P+++ P+ L+ RPDIR E + Sbjct: 255 QLEQQ-RTLLAILGGQLPGDAAGAPFTLDTLQLPAQLPLSL--PSRLVDRRPDIRAAEAQ 311 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG+A + PS++L+ + + F NT WS L P+F G + Sbjct: 312 AHAASALIGVAAAARLPSITLSAAGGGSASSVGRMFAAGNTQWSVAGSLLQPLFHGGALA 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R AE+ + ++ VLNA EV NALT++ D + + A L +++++L Sbjct: 372 HQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQNLRACADAQALAERTLALVQ 431 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + D+L ++A + A+ V LY A+G G Sbjct: 432 RQQAVGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 479 >gi|270340140|ref|ZP_06007173.2| FusA/NodT family multidrug resistance protein [Prevotella bergensis DSM 17361] gi|270332522|gb|EFA43308.1| FusA/NodT family multidrug resistance protein [Prevotella bergensis DSM 17361] Length = 472 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 211/473 (44%), Gaps = 38/473 (8%) Query: 1 MNILRAIF--SLFIVLLAGC-TVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLK--- 51 M I+R I +L ++ ++GC ++ +Y +P + L+ S+ ++ L++ DTL Sbjct: 12 MKIIRNIILGTLTLLSMSGCKSLYGKYERPEVNTRGLIRDSLSLTDT--LVSTDTLSFGN 69 Query: 52 --WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W E F D L +L++ AL N +L A I A+ + + + P + I Sbjct: 70 MAWREVFTDPQLQRLIQKALDNNPNLLNAALNIEMAQAQLKAAKLAFLPQ-FVFTPQGNI 128 Query: 110 PNLKTNSTGQLD----SDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 N+T D + W + LFG +R + SL + V K +++S + Sbjct: 129 TRFNDNTTKSYDLPVTASWNVPLFGGLTAAKRAAQVSLIQMQDYQLSV---KTSLVSGVA 185 Query: 162 PSYIDARHFKERISIAHQILDLYKKN-IELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y ++ + ++ L KK ++ +K ++ ++ E+ S+ + Sbjct: 186 NLYYTLLMLDRQMELVQEMETLTKKTWTQMEAMKNSRMGYRSTAVQAAESNYYSVLTRKA 245 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L++ R +++S LLG PA + + L + G+ L+RNRPD+ Sbjct: 246 DLKRQVREMENSLSLLLGEPAQTITRGKLDEQD-----LPARFSTGVGIQLLRNRPDVHA 300 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHW--SFGPKLYLPIFD 336 E LA + A+++ YP+++++G+ ++ PG W S L PIF Sbjct: 301 NEMALAACFYDVEKARANFYPNINISGTGGFSNGKGMINPG---QWLLSAVASLTQPIFM 357 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 GKI + +R AE+ ++ Y TWQ ++L A EV NAL N ++ + +E+ KK+ Sbjct: 358 NGKIVAGLRVAEAKYKQAYNTWQNSILTAGNEVSNALVLYNSSQEKSSIEAKQIEVLKKN 417 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + I + L+++ E V++ ++ V+LY A+G G Sbjct: 418 VEQTHILLDMAGSTYLEVITAESNLLNVQLSKVADDFSKMQAVVNLYQALGGG 470 >gi|126667500|ref|ZP_01738471.1| probable outer membrane protein [Marinobacter sp. ELB17] gi|126628092|gb|EAZ98718.1| probable outer membrane protein [Marinobacter sp. ELB17] Length = 516 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/463 (24%), Positives = 203/463 (43%), Gaps = 84/463 (18%) Query: 51 KWWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRF 108 +WW+++ D +L L++ A N L IL EN+ V+ADL + Sbjct: 75 QWWQAYGDPNLLALIEKAQAANPDLAIL---------AENL--VQADL---QLQNAGASL 120 Query: 109 IPNLK-TNSTGQL-----DSDW--------------KIDLFGQRRHIESSLA-NLDSAYA 147 +P + + STG+ DW ++DL+G+ E + + D++ Sbjct: 121 LPGIGLSGSTGEQTRRPNGGDWLSSGSTSVSTSISYEVDLWGRLGAAEDAASFRRDASAF 180 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 A+L++ + ++ ++R++IA Q L+L ++ + + +++ G + L + Sbjct: 181 DFVAAQLSLSGAVASNWFQLLELRQRLNIARQNLELAEQTLRIVDVRYRNGVADRSELAR 240 Query: 208 LEAEIKSIESDIPTLEKSFR------------------------MNVHNIST-------- 235 + + + +PTL R M N+S Sbjct: 241 QSTAVLVLRNALPTLVYGLRQSQAALQVLSGEPPWMVKSGEPPWMESANVSGDSPVDVHV 300 Query: 236 --LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 LLG E ++ + + IP IN G PA+LI RPD+ E +L + A I Sbjct: 301 DKLLGESGGELRGKLRGELQKIR----IPDINAGSPAELITRRPDLAAVEARLQAANADI 356 Query: 293 GIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ L P++SL+ ++ L+ D S P T S L +FD G +N+ +ES Sbjct: 357 AQARAALLPAVSLSAALGLSSDGLLSLPSPLTTASGLLALSQTLFDGGTRSNNVALSESR 416 Query: 351 AQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ ++LNA E +A+ IN E ++ + +++H E +++ LS + YRQG Sbjct: 417 QVALIQSYRSSLLNAFSEAGDAIARINLYREQEQRLAEIEHRAE---ETLRLSEVRYRQG 473 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ +LD +R V S A+ + VDLY A+G G+ Sbjct: 474 AEDLITLLDSQRTLFDARVQRSEARLNHLLATVDLYKAVGGGF 516 >gi|146301866|ref|YP_001196457.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146156284|gb|ABQ07138.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 468 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 125/472 (26%), Positives = 213/472 (45%), Gaps = 54/472 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LL+ C++ +Y +P + S + I + W FND LN L++ L QN Sbjct: 16 ALLSACSITKKYERPAALSTDKLYRDEASADTTTIADMPWQSVFNDEKLNALIQKGLDQN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSY--ASISHR-------------FIPNLKTNST 117 L + A E I A+ ++ + +P+ AS +H I L T Sbjct: 76 LNLKNAIENIVQARASLRQSKLAYYPTLQLDASATHTKQSEAGLNFPAGININTLTTTYK 135 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKER 173 + + W+ D++G+ + SS ++Y D AK + ++LI +Y + + Sbjct: 136 LGVSTSWEADIWGK---LSSSKRAALASYLATDAAKQAIQTQLISDIANNYFMLLAYDKS 192 Query: 174 ISIAHQILDLYKKNIE-LSHLKFTQGA-TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + I + L+ KN+E + LK +GA + ++V+ EA + E IP L++S R + Sbjct: 193 LKITQETLESRIKNVETIKALK--EGAIVTGAAVVQSEANQHAAEVLIPDLKQSIRETEN 250 Query: 232 NISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 ++ LLG P ++ Q IP NI G+ + L+ NRPD+R E + Sbjct: 251 ALNILLGQAPGPIDRGELETQ--------VIPENIAIGVSSQLLENRPDVRQAEFNFRVA 302 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +AK+ YPSL+L S ++ F + +S L PIF++GK K + Sbjct: 303 FESTNLAKTYFYPSLTLTASGGFSNLELKDFFTNSIFYSIIGGLTQPIFNQGKNKLRLTT 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSIN-----ED--KKIVTKLQHAVELHKKSMSL 399 A+S + Y +Q+++L A +EV NAL S ED KK + L+ AV+ ++ + Sbjct: 363 AQSQQLQAYNNFQQSLLTAGQEVSNALYSYQMAVEKEDSRKKQIEALEKAVDFTQQLLEY 422 Query: 400 -SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S NY D+L E+ ++ Q ++ V+LY A+G G+ Sbjct: 423 SSATNYT-------DVLTSEQNLLAAQLSGINDNLQKLQAVVNLYRALGGGW 467 >gi|91210588|ref|YP_540574.1| putative outer membrane channel protein [Escherichia coli UTI89] gi|110641528|ref|YP_669258.1| outer membrane efflux lipoprotein [Escherichia coli 536] gi|170681888|ref|YP_001743888.1| multidrug efflux outer membrane protein EefC [Escherichia coli SMS-3-5] gi|191170949|ref|ZP_03032500.1| multidrug efflux outer membrane protein EefC [Escherichia coli F11] gi|237705321|ref|ZP_04535802.1| outer membrane efflux lipoprotein [Escherichia sp. 3_2_53FAA] gi|300971885|ref|ZP_07171685.1| putative outer membrane efflux protein OprM [Escherichia coli MS 200-1] gi|306813680|ref|ZP_07447861.1| outer membrane efflux lipoprotein [Escherichia coli NC101] gi|331657347|ref|ZP_08358309.1| putative outer membrane efflux lipoprotein [Escherichia coli TA206] gi|91072162|gb|ABE07043.1| putative outer membrane channel protein [Escherichia coli UTI89] gi|110343120|gb|ABG69357.1| probable outer membrane efflux lipoprotein [Escherichia coli 536] gi|170519606|gb|ACB17784.1| multidrug efflux outer membrane protein EefC [Escherichia coli SMS-3-5] gi|190908681|gb|EDV68269.1| multidrug efflux outer membrane protein EefC [Escherichia coli F11] gi|222033099|emb|CAP75839.1| outer membrane channel protein [Escherichia coli LF82] gi|226900078|gb|EEH86337.1| outer membrane efflux lipoprotein [Escherichia sp. 3_2_53FAA] gi|281178486|dbj|BAI54816.1| conserved hypothetical protein [Escherichia coli SE15] gi|294492130|gb|ADE90886.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli IHE3034] gi|300309276|gb|EFJ63796.1| putative outer membrane efflux protein OprM [Escherichia coli MS 200-1] gi|305852954|gb|EFM53399.1| outer membrane efflux lipoprotein [Escherichia coli NC101] gi|307627131|gb|ADN71435.1| outer membrane efflux lipoprotein [Escherichia coli UM146] gi|312945930|gb|ADR26757.1| outer membrane efflux lipoprotein [Escherichia coli O83:H1 str. NRG 857C] gi|315289135|gb|EFU48533.1| putative outer membrane efflux protein OprM [Escherichia coli MS 110-3] gi|315297210|gb|EFU56490.1| putative outer membrane efflux protein OprM [Escherichia coli MS 16-3] gi|323187528|gb|EFZ72837.1| outer membrane protein oprM [Escherichia coli RN587/1] gi|323953833|gb|EGB49634.1| NodT family protein efflux transporter [Escherichia coli H263] gi|324006144|gb|EGB75363.1| putative outer membrane efflux protein OprM [Escherichia coli MS 57-2] gi|324011288|gb|EGB80507.1| putative outer membrane efflux protein OprM [Escherichia coli MS 60-1] gi|331055595|gb|EGI27604.1| putative outer membrane efflux lipoprotein [Escherichia coli TA206] Length = 457 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|86151356|ref|ZP_01069571.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 260.94] gi|315123926|ref|YP_004065930.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841703|gb|EAQ58950.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 260.94] gi|315017648|gb|ADT65741.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 485 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 113/466 (24%), Positives = 202/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGTLSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++SI ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESI----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + + ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKHQSYQVFNLKEFDIPTGISSVILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGAIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKNEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|153826998|ref|ZP_01979665.1| multidrug resistance protein, putative [Vibrio cholerae MZO-2] gi|149739159|gb|EDM53445.1| multidrug resistance protein, putative [Vibrio cholerae MZO-2] Length = 484 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/443 (23%), Positives = 215/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P+D L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSDAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFKG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|218259614|ref|ZP_03475292.1| hypothetical protein PRABACTJOHN_00951 [Parabacteroides johnsonii DSM 18315] gi|218224980|gb|EEC97630.1| hypothetical protein PRABACTJOHN_00951 [Parabacteroides johnsonii DSM 18315] Length = 455 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/429 (22%), Positives = 203/429 (47%), Gaps = 31/429 (7%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 + S + N+ L W E F D L +L++ LQ N + A R+ A+ ++S + Sbjct: 39 VAASDSTDNLGNLGWREVFTDPYLRELIEQGLQSNTDLQSAQWRVKEAEATLMSAKLAFL 98 Query: 98 PSSYASISHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDI 151 PS +A + + Q + + W++D+FG+ R+ +S A L+ ++ Sbjct: 99 PS-FALAPQGTVSSFDGGKATQTYSVPVTASWELDIFGRMRNAKSQAEALLEQSHDYRQA 157 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + +I+ + Y E+++I+ + +K+ ++ + G ++ ++ ++EA Sbjct: 158 VRTQLIASIANVYYTLLMLDEQLAISERTRQSWKETVDATRALMDAGLANEAAVSQMEAT 217 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIP 268 SI + + L++ +++S LL P + +++Q+ +P + +GIP Sbjct: 218 YYSISTSLLDLKEQINQTENSLSLLLAESPRSVERGKLERQT--------LPDHLAVGIP 269 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHW 324 ++ NRPD+R E L + A+S YPS+ L GS T+ PG Sbjct: 270 VQMLSNRPDVRRAEHSLESAFYATNQARSAFYPSIVLGGSAGWTNSAGSMIINPGKFLAT 329 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKK 381 + G L P+F++G + ++ A++ +E +++Q+ +LNA EV +AL + + Sbjct: 330 AIG-SLTQPLFNRGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNDALVKYQTARDKAG 388 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA-KSYV 440 + K ++E +S SL+M+ G + L++L +++ ++ +A R + + + Sbjct: 389 LFEKQIASLEKAYESTSLTML---YGNTTYLEVLTAQQSLLSAQLT-QVANRFMEIQGVI 444 Query: 441 DLYIAIGSG 449 +LY A+G G Sbjct: 445 NLYQALGGG 453 >gi|300774661|ref|ZP_07084524.1| FusA/NodT family multidrug resistance protein [Chryseobacterium gleum ATCC 35910] gi|300506476|gb|EFK37611.1| FusA/NodT family multidrug resistance protein [Chryseobacterium gleum ATCC 35910] Length = 471 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 116/467 (24%), Positives = 226/467 (48%), Gaps = 46/467 (9%) Query: 14 LLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LL C VG +YT+ + + T + S+ + + + L W F D L L+ AL +N Sbjct: 18 LLMSCAVGKKYTRTDLQMPETYKESLQVTGDTV---VLPWKTFFKDPKLIGLIDKALSRN 74 Query: 73 LTI---LQATERINAA-KENILSVRADLFPSSYA------------SISHRFIPNLKTNS 116 + L+ E+++ A K+ LS+ L S+ A S++ +F+ + Sbjct: 75 NEVNVALKNIEQLDLAYKQAKLSLMPTLDFSAGANRSWASKNTLNGSLNEQFVGTKYLDD 134 Query: 117 -TGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 T L W++D++G+ + ES+ A ++ K ++ ++ +Y + E++ Sbjct: 135 FTAALRLSWEVDIWGKAKMQKESAAAEYFGQKENLNAIKSRIVVQVAQAYYNLISLDEQL 194 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA Q ++L +++ +L+F G + L++ + EA+ K+ E IP +++ + + +S Sbjct: 195 KIAEQNIELSDNTLKMMNLQFKAGQINSLAVQQSEAQKKTAELLIPLAKQNISIQENALS 254 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPINI---GIPADLIRNRPDIRYQEKKLADSVA 290 L G YPA ++++ N IP N G+PA L+ RPD++ E + + Sbjct: 255 ILCGDYPAK-----VEREGN---LKAMIPENRLSEGLPAQLLSRRPDLKMAEFNVISLNS 306 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSF------PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 K G+AK+ +YPS+SL+ I + + N F PG T + L P+F K ++K+ Sbjct: 307 KTGLAKAAMYPSISLSPQIGV-NSNKFSSWFDIPGSITK-AIAANLAAPVFQKKELKTAY 364 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A ++ I ++++V+ A+ EV +A+ + + L+ + K ++ ++ Y Sbjct: 365 ETALIEQEKASINFKQSVMTAVGEVSDAMAKSKGSSERLQLLEQRTAILDKGINDALKLY 424 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 + G + L+++ + K++ DL L K + VDLY A+G G Sbjct: 425 KSGMATYLEVITAQ--NNKLQNDLEAINVTLEKLNAEVDLYRALGGG 469 >gi|254522296|ref|ZP_05134351.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Stenotrophomonas sp. SKA14] gi|219719887|gb|EED38412.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Stenotrophomonas sp. SKA14] Length = 497 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 92/417 (22%), Positives = 193/417 (46%), Gaps = 19/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF 108 WW++ D L+ LV L + ++ A R+ A+ + + RAD PS S + R Sbjct: 67 WWKALGDAQLDALVAEGLAGHPSLDAADARLRQAQAQVGTARADQLPSLSVSGGYTGLRL 126 Query: 109 IPNLKTNSTG---------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 ++ + G D + +DL+G +R E+++ +A + A+LN+ + Sbjct: 127 PESMVGSEMGGRYGGSSQVAFDFSYGVDLWGGKRAAWEAAVDGAHAATVEAQAARLNLST 186 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y D + + +A + L +K+++L+ + + G S L + + EA + + + Sbjct: 187 GIAQAYADLAYAWQLNDVAEEELTRSQKSLQLTRQRRSAGIDSDLQVRQAEARVPAAQQQ 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ ++ L+G L + Q N + + + +P++L+ RPDI Sbjct: 247 VLAAQQRIDAARTALAALVGKGPDRGLSIQRPQPLN---PMALQLPGVLPSELLGRRPDI 303 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ + +I +A++ YPS +L G +A + +T GP L LPIF Sbjct: 304 VAARWRVEAADKQIKVARTKFYPSFNLTALAGVVAPNVGDLLKSSSTFAYIGPALSLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK+++N+ ++ + + VL+A+++V + + ++ + Q AV+ + Sbjct: 364 EGGKLRANLANTDAQYDLAVANYNQAVLDALRDVADQVNAVRSLAQQAHAQQQAVDTARS 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S LD+L + + + L+ + Q ++ V L A+G G+ P Sbjct: 424 AFDLAQQRYRAGIGSYLDVLTAQSTLLQSQQQLAGLQSQQVQTSVRLSKALGGGFQP 480 >gi|320195691|gb|EFW70316.1| RND efflux system, outer membrane lipoprotein CmeC [Escherichia coli WV_060327] Length = 457 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQSQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|167840595|ref|ZP_02467279.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 445 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/443 (21%), Positives = 197/443 (44%), Gaps = 34/443 (7%) Query: 34 TQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 T+F+ + + D WW F ++ V A + T+ +A + ++ ++ Sbjct: 7 TRFAASGATQTLAPDAPFPDAWWRLFGSRKIDAAVDDAFAGSPTLARAQATLARSEHELI 66 Query: 91 SVRADLFPSSYASIS---HRFIP------------NLKTNSTGQLDSDWKIDLFG-QRRH 134 + +P + A R++P NL T ST + +D++G +RR+ Sbjct: 67 AGAGVFYPQADAQAGASRQRYVPLRTGANLPASIFNLFTLST---TVSYALDIWGGERRN 123 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 +E A D+ + A+L + + ++ + I + + I++ +++ L + I L+ + Sbjct: 124 VEGLAAQADAQRHALAAARLTLAANVVNTMIARAAYADEIAVTRELIALTDEQIRLTRAQ 183 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSN 253 GA++ +++ LEA S+++ +P LE+ ++TL G YPA + Sbjct: 184 VNAGASAYSAVLSLEAARASLDASLPALEQKTGEADDLLATLAGRYPAERAPPELSLA-- 241 Query: 254 NFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + +P + +P++L+R RPDI E L + A IG+A + L+P ++L+ S Sbjct: 242 ----EIALPAELPQTVPSELVRRRPDILQAEAALHAASANIGVATAALFPGVTLSASGGF 297 Query: 312 THDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + F WS G + P+F G + + A + E +++TVL+A + Sbjct: 298 DATRASALFGAAGKTWSVGASITAPLFHGGALWYQRKAAIDAFDESSAAYRQTVLSAFAQ 357 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 V + L +++ D + A + ++++ L I + G L +L ++ + + Sbjct: 358 VADTLRALDHDAAALDAQSRATDAAREALRLVTIEFETGAAGYLQVLAADQQYRQARLAW 417 Query: 429 SIAKRQLAKSYVDLYIAIGSGYN 451 A Q + V LY A+G G+ Sbjct: 418 VQASAQRLQDTVALYAALGGGWG 440 >gi|17546573|ref|NP_519975.1| outer membrane multidrug resistance lipoprotein [Ralstonia solanacearum GMI1000] gi|17428872|emb|CAD15556.1| putative outer membrane multidrug resistance lipoprotein [Ralstonia solanacearum GMI1000] Length = 475 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 108/466 (23%), Positives = 209/466 (44%), Gaps = 23/466 (4%) Query: 1 MNILRAIFSLFIVLLAG-CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFN 57 + LRA L + L+AG C PE ++ P P +S + WW+++ Sbjct: 12 LRWLRAGVVLPLALVAGACAQFPEASERPTPQTPEGLHSASSLAASAVAWPDDHWWQAYG 71 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKT 114 D LN L+ AL+ + + A R+ A+ A L P A+ S R + Sbjct: 72 DAQLNALIGEALRDSPDMAAAAARLRGAEAAGAVAGAALLPQVSANASAARQRQSGSSDW 131 Query: 115 NSTGQ--LDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N G+ LD W+ID +G+ R + ++ ++L+++ A A+L + S + SY D Sbjct: 132 NEVGRATLDFSWEIDFWGRNRASLAAATSDLEASRADAAQARLTLASAIASSYADLAGLY 191 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 L + + + +L +F G ++ + + EA + S E ++ +++S + H Sbjct: 192 AVRDADEAALAVRRHSAQLFTERFASGLETRSGVKQAEALLASAEGELLRVDESIGLTRH 251 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN----RPDIRYQEKKLAD 287 ++ L+G L + P++ I G+PA+L N RPD+ + Sbjct: 252 ALAALVGAGPDRGLTIRR-------PSVAIRSPEGLPAELAVNLLGRRPDVVAARLQAEA 304 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 V +I +++ YP+++L+ I N F + S GP + LPIF+ G+++ + Sbjct: 305 QVHRIDSKRAEFYPNVNLSAFIGFESIGLSNLFKSGSRIGSIGPAVSLPIFNGGRLRGEL 364 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +RA++S E + T+ A+++V +A S + K++ A +++ +++ Y Sbjct: 365 KRAQASYDEAVANYNRTLTQALQDVADAWLSRKALAPRLAKVEEAFRAAEQAYRVTLNRY 424 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S L++L + + L+ + + V + A+G GY Sbjct: 425 EGGLASYLEVLTAQDTLLTNQRALTDLQSRAFTLDVAMTRALGGGY 470 >gi|126444707|ref|YP_001061924.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|126224198|gb|ABN87703.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 668] Length = 460 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 92/408 (22%), Positives = 188/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + +DLY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMDLYQVLGG 458 >gi|332761525|gb|EGJ91807.1| cation efflux system protein cusC [Shigella flexneri 2747-71] Length = 396 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 109/409 (26%), Positives = 199/409 (48%), Gaps = 34/409 (8%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---- 116 + L+ AL N + AT ++ A+ AD +P S + NLK +S Sbjct: 1 MKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGS--WSGNLKGDSATTR 58 Query: 117 ---TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + Sbjct: 59 EFSTG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAY 116 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ IA + L Y+++ + G+++ L+L + I+S SDI + + Sbjct: 117 AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN 176 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LLG + Q Q+ N + + G+ + ++ RPDI E L + A Sbjct: 177 ALQLLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANAN 232 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG A++ +PS+SL I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Sbjct: 233 IGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAE 292 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH---KKSMSLSMINY 404 Q+ + +++ + NA KEV +AL D +I + ++ L +++ +L Y Sbjct: 293 IRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARAL----Y 348 Query: 405 RQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G S L++LD ER AT + +DL+ A RQ+ + Y LY A+G G+ Sbjct: 349 QHGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNEIY--LYTALGGGW 394 >gi|282858990|ref|ZP_06268128.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella bivia JCVIHMP010] gi|282588270|gb|EFB93437.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella bivia JCVIHMP010] Length = 459 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 118/458 (25%), Positives = 208/458 (45%), Gaps = 23/458 (5%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLKWWESFNDTSL 61 + SL + L GC ++ Y +P + + N + + + L W F D L Sbjct: 8 VLSLAALSLTGCKSLYGNYERPDVKITGVVRDPVNDQATLEGANDFGNLPWRSVFTDPQL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNS- 116 L+ AL N + A I+ A++ + + + P + +ISH T + Sbjct: 68 QTLIDRALNNNPNLANAVLNIDIAEQQLKAAKLSFLPNVAFAPTGTISHFGSHTEATKAY 127 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T + + W +DLFGQ R + + A L A+ ++I + Y + Sbjct: 128 TLPIAASWNVDLFGQLRAKKKVAQAMLLQMKDYKVAAQTSLICNIANLYYTLLMLDRQKE 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I + +L K ++ L+ G S+ EA +++ T++ + R +++S Sbjct: 188 IVDNMSELTKNTWDMMKLQMEFGRARSTSVQSAEAAYYHVQTQSVTIKGNIREAENSLSL 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P +H + + S + Q NL + GI L+ NR D+ +E LA I A Sbjct: 248 LLGEP----VHSIARGSLSNQ-NLPTNFSGGIGIALLSNRADVHAKEMALAQCFYNIQEA 302 Query: 296 KSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +S YP+L+++ + A ++ N PG S L PIF +GK+K+ +R AE ++ Sbjct: 303 RSRFYPALNISPTGAWSNGNGLVNPG-KLLLSVVGSLTQPIFAQGKLKAGLRVAEDQYKQ 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 Y TWQ ++L A EV NAL + N + +Q +++ KK++ S + Y+Q S L+ Sbjct: 362 AYNTWQNSILTAGSEVSNALVAYNSANEKNKLMQQQIDVLKKNVEHSQLLYKQSSSSYLE 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 ++ ++ ++ S + Q K S V+LY A+G G Sbjct: 422 VITAQQNLLNAQI--SQVQEQFTKLQSIVNLYYALGGG 457 >gi|183179392|ref|ZP_02957603.1| multidrug resistance protein, putative [Vibrio cholerae MZO-3] gi|183012803|gb|EDT88103.1| multidrug resistance protein, putative [Vibrio cholerae MZO-3] Length = 484 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 102/443 (23%), Positives = 212/443 (47%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF------SIGNSKNLINID--TLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + SI + +D + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSINTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE------NILSVRADLFPSSYAS-ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ I S +L S+ S +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLELAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAKAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ E+ + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|161523231|ref|YP_001578243.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189348912|ref|YP_001944540.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160340660|gb|ABX13746.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189332934|dbj|BAG42004.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 527 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 108/466 (23%), Positives = 207/466 (44%), Gaps = 39/466 (8%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYDDPQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLK--------------- 113 N TI Q+ A+ + RA FP+ AS S P Sbjct: 85 SNQTIAQSAAAYRQARALVSEARAAYFPTVGLSASGSRARTPRSSFSSGTSSSFGSSTSG 144 Query: 114 ----TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SINNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTYFQLR 203 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Y+++++L+ ++ QG ++ +++ + +++S ++ + Sbjct: 204 TSDALQKLLDETVQSYRQSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGVARAQ 263 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+TL+G PA+ F + +P + P+++ P+ L+ RPDI E++ A + Sbjct: 264 YEHAIATLIGEPASTF--SLPPMPLTAEPPI-TPVDV--PSTLLERRPDIAAAERRAAAA 318 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+A S +P+L+L+ S F W+ GP+L +FD G + + Sbjct: 319 NEQIGVAISAFFPTLTLSASGGFESSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTQ 378 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + ++ VL+A ++VE+ L S + + + AVE + ++++ Y+ Sbjct: 379 AARATYDQDVAAYRLAVLSAFQDVEDNLASQRILAQEIDVQRQAVESAEHALAIVTNQYK 438 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++L + L+ Q S V L A+G G+N Sbjct: 439 AGTVAYLNVLTAQTTAFTARQKLATITGQRMVSSVGLVKALGGGWN 484 >gi|325854984|ref|ZP_08171700.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella denticola CRIS 18C-A] gi|325483962|gb|EGC86902.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella denticola CRIS 18C-A] Length = 459 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 112/462 (24%), Positives = 210/462 (45%), Gaps = 31/462 (6%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHMPL-------LPTQFSIGNSKNLINIDTLKWWESFND 58 I +L + L GC ++ Y +P + + + + ++ + + N L W F D Sbjct: 8 ILALIALSLTGCKSLYGTYERPDVKVNGIVRDPVDDKATLEGANDFGN---LPWRSVFTD 64 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKT 114 L L++ AL N +L A I+ A++ + + + PS +ISH T Sbjct: 65 PQLQALIEKALNNNPDLLNAALNIDIAEQQVKTSKLAFLPSVVFAPTGTISHFGSHTSST 124 Query: 115 NS-TGQLDSDWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + T + + W +DLFG+ R + + + + S QV + + +I + Y Sbjct: 125 QAYTLPVSASWDVDLFGKLRSAKKAAQMMLIQSHDYQVSV-QTTLICSVANLYYTLLMLD 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ I + L K ++ L+ G S+ E+ S+++ + + R + Sbjct: 184 QQKQIVDDMSGLTKNTWDMMKLQMEYGRARSTSVQSAESAYYSVQTQSADIRRQIRETEN 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +S LLG PA + + S + Q +L + GI L+ NR D+ E LA Sbjct: 244 TLSLLLGEPA----QGIARGSLDSQ-SLPTSFSGGIGVQLLSNRADVHANEMALAQCFYN 298 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 I A+S YP+L+++ + A T+ N PG S L PIF +G++K+ +R A+ Sbjct: 299 IQEARSRFYPALNISPTGAWTNSNGMVNPG-KLLLSVVGSLTQPIFMRGQLKAGLRVAQD 357 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ Y TWQ ++L A EV NAL + N + + + + K+++ + + Y Q Sbjct: 358 KYKQAYNTWQNSILKAGSEVSNALVAYNSANEKEQLRKQQIGVLKRNVDDTQMLYAQSSS 417 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 + L+++ +++ E+ S + Q +K + V+LY A+G G Sbjct: 418 TYLEVITAQQSLLNAEI--SQVQEQFSKLQAIVNLYNALGGG 457 >gi|312966774|ref|ZP_07780992.1| outer membrane protein oprM [Escherichia coli 2362-75] gi|312288238|gb|EFR16140.1| outer membrane protein oprM [Escherichia coli 2362-75] Length = 457 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQSQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|197295427|ref|YP_002153968.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|195944906|emb|CAR57515.1| efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 513 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 114/472 (24%), Positives = 209/472 (44%), Gaps = 43/472 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--------INIDTLK---WWESFNDTS 60 + L C+ P Y+ P + +P ++ + + D WW F+D Sbjct: 19 VAALTACSTLPRYSPPAV-AVPAHYAGAPAAPAEQTGWHVAMPADAAARGAWWTVFDDAD 77 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISH-RFIPNL 112 LN L N T+ +A + A+ + A P+ S A +S R +L Sbjct: 78 LNALEARVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTITAGAAQSRARVSQNRLGSSL 137 Query: 113 KTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +T + + W+ DLFG+ R + + AN ++ A + KL+V ++L Y Sbjct: 138 AGKTTPDYQVGVAASWEPDLFGRVRDAVTGAQANAAASAADLQAVKLSVTAELATDYFAL 197 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + + + Y + L + GA ++ + E +++S + ++ S Sbjct: 198 RSLDTQKQLLDDTVHAYADALTLLKQQLAAGAIDASAVAQAETQLESTRTQDTDIDASRA 257 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 H I+TL+G A+ F + QP ++P I G+P+ L+ RPDI E+++A Sbjct: 258 QLQHAIATLVGESASTF-----ALPPHVQP-FHVPAIPAGVPSQLLERRPDIAAAERRVA 311 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIK 341 + A+IG A++ +P L L+ S L ++SF + WS GP+L +FD G+ Sbjct: 312 AANAQIGEARAAFFPDLVLSASAGL--ESSFFAPWLAAPSLFWSLGPQLAGTLFDGGRRS 369 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++R A + +++TVL A ++VE+ L++++ Q A + S+ L+ Sbjct: 370 ASLRGAHAQYDGAVADYRQTVLVAFQQVEDQLSALDALASEAGSQQRATDAADLSLRLTT 429 Query: 402 INYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S LD++ + T + D A+R A+ V L A+G G+ Sbjct: 430 NRFNAGAVSYLDVVTAQTIALTNRRTADQIDARRIEAE--VGLLKALGGGWQ 479 >gi|260752727|ref|YP_003225620.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552090|gb|ACV75036.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 459 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 111/471 (23%), Positives = 225/471 (47%), Gaps = 46/471 (9%) Query: 6 AIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDT 59 +++S FI ++LA C+ P T P+ P+Q ++ + D KWW ++ND Sbjct: 10 SLYSGFIATLILAACS--PFKT----PVPPSQVAVPSQFAQAAAGQASDISKWWLAWNDP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIP 110 +L K+++ L+ NL + A + I AK N ++ L P+ +R++ Sbjct: 64 ALTKVIEDTLKANLDLRIARDHIQEAKSNFKMTKSSLSPTIGVTGNIAGGGTDSRNRYLN 123 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDAR 168 + + T + W DLFG R H ++ A + AQ+ ++ + +++ Y + Sbjct: 124 SFSNDFT----ASWDADLFGAR-HADAKAAKAEVLGQEAQLHQIQMAIAAEVASYYTGIQ 178 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++R+++ Q L L + + +F G + + L+ +I + S P LE + Sbjct: 179 CLRKRLALIDQRLILLENLKSYTQARFNAGQATLSDIKGLDVQINILHSYRPDLESAIAA 238 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLAD 287 ++ +I+ +LG E + + S + P P G +P+ ++ RPDI E + Sbjct: 239 SLRHIA-ILGGKTPENVE-IAISSESVTP----PAPAGELPSTVLNRRPDIAAAEANINA 292 Query: 288 SVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 ++ ++ AK+DL P L +G I + + F N+ YLPIF G++ + Sbjct: 293 ALNRLKSAKADLLPRFGLQFFGGDGRIRFSGLSGFS--NSGGIMALTAYLPIFTAGRVHA 350 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +I ++ E + + +L+A+ EVENA + + K + +L A+ ++++++ Sbjct: 351 HIALEDAKLDEAVAFYDKKLLSALTEVENAYQARSSQDKRIMQLSQALATTEQNITVEQG 410 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAK--RQLAKSYVDLYIAIGSGYN 451 Y+ G+++L ++L E KV+ D S+ + +Q + ++LY A+G G++ Sbjct: 411 LYQGGKHTLQNVL--ETKLDKVDKDDSLIQTIQQQQMATINLYYALGGGWS 459 >gi|115350096|ref|YP_771935.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115280084|gb|ABI85601.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 520 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 102/462 (22%), Positives = 203/462 (43%), Gaps = 34/462 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWSVYNDPQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------- 119 N TI Q+ A+ + RA FP+ + S + +T ++ Sbjct: 85 SNQTIAQSAAAYRQARALVAEARAAYFPTVGLTASGSRARSGRTPTSSGASGFGSSSSIS 144 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 NSYSVGLDASWEPDLWGKVSRSVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDA 204 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Y ++ L+ ++ QG ++ +++ + +++S ++ + H Sbjct: 205 LQKLLDDTVKSYGDSLRLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGVARAQYEHA 264 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TL+G PA+ F + QP + P+++ P+ L+ RPDI E++ A + +I Sbjct: 265 IATLIGEPASTF--SLPPNPLTAQPPI-TPVDV--PSALLERRPDIAAAERRAASANEQI 319 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A + +P+L+L+ + F W+ GP+L +FD G + A + Sbjct: 320 GVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTDAARA 379 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++ VL A ++VE+ L S + V + AV+ ++++++ Y+ G Sbjct: 380 TYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAVDSAEQALAIVTNQYKAGTV 439 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L++L + + L+ Q S V L A+G G++ Sbjct: 440 AYLNVLSAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWD 481 >gi|192361636|ref|YP_001982992.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Cellvibrio japonicus Ueda107] gi|190687801|gb|ACE85479.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Cellvibrio japonicus Ueda107] Length = 465 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 220/465 (47%), Gaps = 28/465 (6%) Query: 4 LRAIFSLFIVL--LAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDT 59 ++ + +L + + L+ CT P P++ P QF+ G + + ++D +WW++FN Sbjct: 7 VKPMLTLVVAMGFLSACT---HTALPTQPVINYPAQFATGVAAD-ESMDP-QWWQAFNAP 61 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF-IPN--LK 113 +LN+L+ +A QQ+ +L ER+ A+ + A FPS S +S R P+ + Sbjct: 62 ALNQLLDMADQQSPDLLITRERVRQAEYQLNIANASWFPSLDLSASSGRRRSEAPDGVVS 121 Query: 114 TNSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + LD +++DL+G ++ A+ ++ D A+L++ + + + Sbjct: 122 RTESSSLDVRISYEVDLWGGVAAERRAARASYNATRYDQDAAQLSLRAAIASGWFQWLAL 181 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +ERI A + +D+ ++ + + ++ G+ S + + + + S ++ + L+ R Sbjct: 182 RERIDTAQKNIDIAQRIMRVVDARYRNGSASAADVAQQKTNLLSQQASLLPLQLQARQAS 241 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ L+G EF+ + S P I G PA LI RPD+ E L + A Sbjct: 242 AALAILVGKTPQEFVLAEEPISAMTVPE----ITPGTPAQLILRRPDLAASEASLLAADA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSF---PGYN-THWSFGPKLYLPIFDKGKIKSNIRR 346 + A++ L+PSL+L+ I + F P ++WS L +F G++ + Sbjct: 298 NLVAARAALFPSLNLSAGIGRSASELFSLNPATQASNWSL--SLAQTLFSGGRLLNQKGY 355 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +E+ E + + + +L A++EV+ AL S + ++ + ++S+ L+ YR+ Sbjct: 356 SEARRAELLLQYHKAILTALQEVDIALASADNTRQQEEQQTEITAQAERSLRLTEARYRE 415 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G LL +L +R + + L + + VD+Y A+G G+ Sbjct: 416 GSDDLLSLLSAQRTLFQAQDALVQQHQARLTAAVDVYKALGGGWQ 460 >gi|254286144|ref|ZP_04961104.1| multidrug resistance protein, putative [Vibrio cholerae AM-19226] gi|150423813|gb|EDN15754.1| multidrug resistance protein, putative [Vibrio cholerae AM-19226] Length = 484 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 213/439 (48%), Gaps = 40/439 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFNDTSL 61 L + +L GC+V P+ H P L T + +S N ++ + WW+ + D L Sbjct: 23 LSVFVLTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQDAQL 77 Query: 62 NKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF---IPN 111 N L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ P Sbjct: 78 NHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQSATPP 137 Query: 112 LKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y + Sbjct: 138 DGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAELA 197 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 H L + K +EL ++ G + S+ + +A S+E+++ +++S ++ Sbjct: 198 RLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQESIQL 257 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRYQEKK 284 + ++ L+G + ++ +P++ + G+P++ L+ +R DI + Sbjct: 258 QKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWR 310 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F G+++ Sbjct: 311 AEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLE 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ ++ Sbjct: 371 GQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQALHIAT 430 Query: 402 INYRQGRYSLLDILDIERA 420 Y+ G + LD+L E + Sbjct: 431 NRYQGGLATYLDVLVAEES 449 >gi|167743799|ref|ZP_02416573.1| outer membrane lipoprotein [Burkholderia pseudomallei 14] Length = 425 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 87/384 (22%), Positives = 176/384 (45%), Gaps = 27/384 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW F ++ V A + T+ +A + ++ +++ +P + A R+ Sbjct: 20 WWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALITGAGVFYPQADAQAGASRQRY 79 Query: 109 IP------------NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 +P NL T ST + +DL+G +RRH+E A D+ + A+L Sbjct: 80 VPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRHVEGLAAQADAQRHALAAARLT 136 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + I + + I++ +++ L + I L+ + + G ++ +++ L+A S+ Sbjct: 137 LAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQVSAGTSAYTAVLALQAARASL 196 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ +P LE+ ++TL G YPA ++ Q + L + +P++L+R Sbjct: 197 DASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVSLAAIALPARLPRTVPSELVRR 252 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG+A + L+PS++L+ S + F WS G + Sbjct: 253 RPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASIT 312 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 313 APLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMS 372 Query: 392 LHKKSMSLSMINYRQGRYSLLDIL 415 + + L+ + Y G L +L Sbjct: 373 AARDARRLATVQYEAGTAGYLQVL 396 >gi|308072545|dbj|BAJ21895.1| outer membrane channel protein CmeC [Campylobacter jejuni] Length = 492 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 203/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRTKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYKSAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNIKYSYANSIVDVIKAFGGGF 469 >gi|86148947|ref|ZP_01067179.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597302|ref|ZP_01100537.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 84-25] gi|218562023|ref|YP_002343802.1| outer membrane channel protein CmeC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|47834529|gb|AAT38952.1| CmeC [Campylobacter coli] gi|85840305|gb|EAQ57562.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190363|gb|EAQ94337.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 84-25] gi|112359729|emb|CAL34515.1| outer membrane channel protein CmeC (multidrug efflux system CmeABC) [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925636|gb|ADC27988.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni IA3902] gi|315927832|gb|EFV07157.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930671|gb|EFV09692.1| multidrug outer membrane protein [Campylobacter jejuni subsp. jejuni 305] Length = 492 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 203/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRTGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYKSAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNIKYSYANSIVDVIKAFGGGF 469 >gi|198275647|ref|ZP_03208178.1| hypothetical protein BACPLE_01818 [Bacteroides plebeius DSM 17135] gi|198271276|gb|EDY95546.1| hypothetical protein BACPLE_01818 [Bacteroides plebeius DSM 17135] Length = 460 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 104/470 (22%), Positives = 202/470 (42%), Gaps = 47/470 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +++ C + Y +P P T ++ N+ N L W + F D Sbjct: 10 CLAAMMSSCHIYKAYDRPETIDASGVYRDPASATDTLAADTANMGN---LPWKDIFRDAK 66 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L L++ L N+ + A R+ A + + + PS P T S G Sbjct: 67 LQALIEEGLANNVDMQAAALRVQEANVMLTAAKLSYLPS------INLAPQGSTTSMGGG 120 Query: 120 ---------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YID 166 + + W+IDLFG+ I ++ AY Q A+ V S++I Y Sbjct: 121 NYVKAYQLPVSASWEIDLFGK---ILNTKRGQKVAYEQSQYAEQAVRSQIICGIANVYYS 177 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ I + +YK+N+ + G T++ ++ ++ A +E+ + L++ Sbjct: 178 LLMLDRQVEITTETAAIYKENVRVMEAMKIAGMTTEAAVAQMRAASHQVEASLMDLKRQV 237 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R ++++ LL P T + +Q P + G+P L+ NRPD++ E L Sbjct: 238 RETENSLAVLLAKAPQTIERSTLDEQ---VMPE---ELAAGVPMQLLENRPDVKMAEMTL 291 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++ YP L++ G T+ + PG + L PIF+ GK+ Sbjct: 292 AAAYYTTNSARAAFYPGLNITGLAGWTNGSGVTVANPGEFMLQALA-SLAQPIFNNGKLI 350 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N++ +++ + + +Q+T+L A KEV +AL + K + + + VE K+++ + Sbjct: 351 ANLKVSKAEEKIAQMNYQQTILEAGKEVSDALYLFDTQNKKLVEDRGQVEQLDKAVTYTK 410 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G + L+IL ++ ++ Q ++ ++LY A+G G N Sbjct: 411 ALFQSGDATYLEILTAQQNLLSAQLSEVADNFQRMQAVINLYSALGGGRN 460 >gi|189500019|ref|YP_001959489.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeobacteroides BS1] gi|189495460|gb|ACE04008.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium phaeobacteroides BS1] Length = 486 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 105/467 (22%), Positives = 213/467 (45%), Gaps = 28/467 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINI---DTLKWWESFNDTSLN 62 + +F ++L+ C+ +YT+P L T + S+ + + T+ + F D SL Sbjct: 24 LIPMFFLMLSACSTVGKYTQPETGLPGTYRGSVTADSGVAAVPFAGTVPYRTFFADKSLL 83 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTN--STG 118 L+ AL+ N + A + I A + + P S+S + + S+G Sbjct: 84 GLIDAALENNHDLQVAIKNIEYASLGLKQAKLGNLPGLNLQGSVSGATTSDFGSTPFSSG 143 Query: 119 Q---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + L W+ D++G+ R+ +++LA + +I+ + Y + Sbjct: 144 KESVEEYSASLSLSWEADIWGKIRNTRKAALAEYLRSVEAEKAVHTRLIADVARGYYNLL 203 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ I + L + + L++ G + L++ + EA IE+ I +E+ + Sbjct: 204 LLDVQLDITRRNRALADTTLSMMRLQYDAGYVTSLAVEQQEAVKLGIEAGIAGIEQGIAV 263 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + +S L G E + + + + + GIPA L+ NRPD++ E L + Sbjct: 264 QENALSVLCGRMPDEIVRTARLTDLSIENTF----STGIPAQLLSNRPDVKSAEMALMKA 319 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A+ G+A S LYPS +++ GS ALT + +FPG + G L P+F +GK+++ Sbjct: 320 HAESGVAGSRLYPSFTISAEAGSNALTSSDWFTFPGSLFSFVHGAVLQ-PLFQQGKLRTA 378 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +++ + I +++ VLNA++EV +AL +I + L+ + +S+ + + Sbjct: 379 YKQSGVVRDREEILFRQAVLNAVREVSDALVAIQKLDIQEKALEKQERVLTQSVEHANLL 438 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G L+++ ++ + L+ +RQ + +LY A+G G+ Sbjct: 439 FNSGMADYLEVITAQKNALDSGISLADIRRQRLDAQTELYRALGGGW 485 >gi|327313328|ref|YP_004328765.1| NodT family efflux transporter outer membrane lipoprotein [Prevotella denticola F0289] gi|326946052|gb|AEA21937.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella denticola F0289] Length = 459 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 22/416 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 + L W F D L L++ AL N +L A I+ A++ + + + PS Sbjct: 52 DFGNLPWRSVFTDPQLQALIEKALNNNPDLLNAALNIDIAEQQVKTSKLAFLPSVVFAPT 111 Query: 102 ASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVIS 158 +ISH T + T + + W +DLFG+ R + + + + S QV + + +I Sbjct: 112 GTISHFGSHTSSTQAYTLPVSASWDVDLFGKLRSAKKAAQMMLIQSHDYQVSV-QTTLIC 170 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y ++ I + L K ++ L+ G S+ E+ S+++ Sbjct: 171 SVANLYYTLLMLDQQKQIVDDMSGLTKNTWDMMKLQMEYGRARSTSVQSAESAYYSVQTQ 230 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + R + +S LLG PA + QS L + GI L+ NR D Sbjct: 231 SADIRRQIRETENTLSLLLGEPAQGIARGGLDSQS------LPTSFSGGIGVQLLSNRAD 284 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIF 335 + E LA I A+S YP+L+++ + A T+ N PG S L PIF Sbjct: 285 VHANEMALAQCFYNIQEARSRFYPALNISPTGAWTNSNGMVNPG-KLLLSVVGSLTQPIF 343 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 +G++K+ +R A+ ++ Y TWQ ++L A EV NAL + N + + + + K+ Sbjct: 344 MRGQLKAGLRVAQDKYKQAYNTWQNSILKAGSEVSNALVAYNSANEKEQLRKQQIGVLKR 403 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 ++ + + Y Q + L+++ +++ E+ S + Q +K + V+LY A+G G Sbjct: 404 NVDDTQMLYAQSSSTYLEVITAQQSLLNAEI--SQVQEQFSKLQAIVNLYNALGGG 457 >gi|221067613|ref|ZP_03543718.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220712636|gb|EED68004.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 495 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 117/482 (24%), Positives = 212/482 (43%), Gaps = 50/482 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLIN---ID 48 + L LAGC GP++ +P P + PTQF G ++ L+ I+ Sbjct: 23 VAGLVTAGLAGCAAGPDFQRPTAPDVARYTATPVADRTASAPTQF--GETQRLVEGLPIE 80 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSV 92 T +WW+S ++L+ L+ A + T+ + + A+E + S Sbjct: 81 T-QWWQSLGSSTLDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQ 139 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDI 151 R + PSS +L S G + +DL G RR +E+ A D +++ Sbjct: 140 RQQMSPSSQGLSGDARQFSLYNASVG---VHYNLDLAGGNRRALEALAARADYRRFELNA 196 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + + I ++ IL + + + L+H + G S + L+A+ Sbjct: 197 ARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQ 256 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +++P L K + H ++ L G P T + +F L + + + +P++ Sbjct: 257 AEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTL--ADF--TLPVEMPLVVPSE 312 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI+ E L + A G+A + LYP ++L+ GS ALT F G + W Sbjct: 313 LVRRRPDIQASEALLHAANADYGVAVAKLYPQINLSANLGSQALTTGTLFGGGSAVWGLV 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL +++ V + L ++ D + +T L Sbjct: 373 AQLTQPLFNPG-LPAEKRAALAAFDAAAANYQSVVLESLRNVADTLRAVESDAQTLTALA 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + S+ YR G S L +L ++ + +++ A+ Q V LY A+G Sbjct: 432 AADMAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAAQAQRLVDSVALYQALG 491 Query: 448 SG 449 G Sbjct: 492 GG 493 >gi|167914073|ref|ZP_02501164.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 112] gi|254299891|ref|ZP_04967339.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|157809748|gb|EDO86918.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 406e] Length = 460 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 92/408 (22%), Positives = 189/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPTLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P I G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEIAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|92119060|ref|YP_578789.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] gi|91801954|gb|ABE64329.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] Length = 499 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 124/489 (25%), Positives = 214/489 (43%), Gaps = 72/489 (14%) Query: 9 SLFIVLL-----AGCTVGPEYTKPHMPL-LPTQF-SIGNSKNLINIDTLKWWESFNDTSL 61 S F VLL +GC +G E +P + L +PT + + + +L WW F L Sbjct: 23 SFFSVLLLAPALSGCILGSE--RPDLNLEIPTTYREASRAAPDAAVPSLDWWRGFRSKEL 80 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG--- 118 L++ A NL I A +I A A L PS + + + + G Sbjct: 81 TSLMEAAQTANLDIAVAYAQIIQADAQAGIAGAPLLPSVTGTATAERARSAASTIGGVSS 140 Query: 119 ----------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN------------- 155 L + + ID +G+ R A L +A +A+ N Sbjct: 141 PPATFSQYNVGLTASYMIDFWGKNR------ATLYAAEENATVARYNRDVVTLTTVVTVA 194 Query: 156 -VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +++ + R + ++ A +IL+L KK +F G S+L L + EA + + Sbjct: 195 NTYFQILAAQDQLRVVRRNLAAAERILELIKK-------QFAGGTASQLDLSQQEALVAT 247 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIR 273 + IP L+ + R N+ ++ L+ F K S + +P + G+P++L+ Sbjct: 248 QRAAIPPLQVTLRQNIAALAVLVARAPANF-----KVSGGATTQITVPRVTPGLPSELLY 302 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGP 328 RPDIR E +LA S + A++ +P + L G S AL PG +++ Sbjct: 303 QRPDIRQAEAQLASSNFSVEAARAAFFPQIQLTGQTGSQSAALAALFG-PG-AWYYTLAA 360 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L PIFD ++S +++A+ Q QY+ +++ VL+A +VE AL ++ + + +LQ Sbjct: 361 SLTQPIFDGFLLESQLKQAK-GLQLQYLQAYRKAVLSAFADVEKALVALQQ-YTLQERLQ 418 Query: 388 H-AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLY 443 + V +K+ +S +R G +LL +L E+ E V + + K A S L+ Sbjct: 419 NDVVSASRKAFEVSETQFRGGTVNLLTVLQTEQTLFTAENVLVQVRLTKLLAASS---LF 475 Query: 444 IAIGSGYNP 452 A+G G+ P Sbjct: 476 QALGGGWVP 484 >gi|28631599|gb|AAO49778.1| outer membrane efflux protein SepC [Pseudomonas putida] Length = 480 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 104/478 (21%), Positives = 206/478 (43%), Gaps = 59/478 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 V L+GC++ P+Y +P P+ + G + D L W F D + + Sbjct: 12 VALSGCSLIPDYQRPPAPIQAGWPQGEAYAKLKAGTHRPSQTRDAELNWQVFFRDPVMRE 71 Query: 64 LVKIALQQNLTILQATERINA---------------AKENILSVR----ADLFPSSYASI 104 L+ AL N + Q + A A + + R ADL P+ A I Sbjct: 72 LIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQRLPADLSPTGEAGI 131 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIP 162 ++ L + +++D+FG+ R +E + L +A Q + ++ +I+ + Sbjct: 132 QSQYDTTLSMS--------YELDMFGRLRSLERAALQEYLAAAETQRSM-QIALIADVAI 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + ++ +A L Y+ ++ L G S L + + + +++ Sbjct: 183 AYLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVETARVQQTLY 242 Query: 223 EKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + +++ + LLG P ++ L QP ++ G+PADL+ +RP Sbjct: 243 TRQVAQDMNALQLLLGTKLPADLPISDVLD---------QP--LAALSTGLPADLLLHRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E +L + A IG A++ +PS++L G+ + D F G + W+F P++ LP Sbjct: 292 DIRAAEHRLLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLP 351 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G+++ N+ +++++ A +EV + L + + + + V+ + Sbjct: 352 IFTAGRLRGNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNN 411 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ Y +G + L +LD +R + + S V L+ A+G G++ Sbjct: 412 QAYYKLAYQRYDEGVDNYLAVLDAQRDVVAAQQQFLSDRLNQLSSEVRLFKALGGGWD 469 >gi|288927033|ref|ZP_06420926.1| multidrug resistance protein, FusA/NodT family [Prevotella buccae D17] gi|288336207|gb|EFC74595.1| multidrug resistance protein, FusA/NodT family [Prevotella buccae D17] Length = 462 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 111/424 (26%), Positives = 194/424 (45%), Gaps = 45/424 (10%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L W F D L L++ AL N +L A +N A+ + + + PS + I Sbjct: 58 LPWRSVFTDPRLQTLIEKALANNTDLLNAALNVNMAESQLKAAKLAFVPS-FTFSPQGTI 116 Query: 110 PNLKTNSTGQ-----LDSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 + N + + + W IDLFG Q+R S +A + + Q+ + K +++ + Sbjct: 117 ASWDGNKPTKTYSLPISASWSIDLFGNLLSQKRS--SQMALIATKDYQL-VVKTKIVTGV 173 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y +++ I + +L K +L ++ G + EA S+++ Sbjct: 174 ANMYYTLLMLDKQLEIVTDMEELTKNTWDLMKIQKELGRVRSTGVQSAEANYYSVQAQKV 233 Query: 221 TLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPD 277 L++ R +++S LL PA T +++QS +P N+ G+ ++ NRPD Sbjct: 234 DLQRQIRETENSLSLLLAQPAQTIGRGKLEEQS--------LPSNLAAGVGIHMLNNRPD 285 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THW--SFGPKLYLPI 334 + Y E LA + A+S YPSL+++ + T+ + N W S L PI Sbjct: 286 VHYAEMSLAQCFYNVETARSRFYPSLTISPTGTFTNSSGMGVVNPGKWLLSAVGSLVQPI 345 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKI----VTKLQ 387 F G+I + ++ A++ ++ Y TWQ+++L+A EV NAL S NE +I V L+ Sbjct: 346 FQHGQIVAGLKVAKAKYEQAYNTWQQSILSAGSEVSNALVLYNSSNEKSQIEARQVATLK 405 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIA 445 VE K+ M+ S Y L+++ +++ E LS + AK + V+LY A Sbjct: 406 QNVEDTKRLMAESNSTY-------LEVITAQQSLLNAE--LSKVRDDFAKMQAVVNLYYA 456 Query: 446 IGSG 449 +G G Sbjct: 457 LGGG 460 >gi|258544783|ref|ZP_05705017.1| outer membrane efflux family protein TolC [Cardiobacterium hominis ATCC 15826] gi|258519992|gb|EEV88851.1| outer membrane efflux family protein TolC [Cardiobacterium hominis ATCC 15826] Length = 471 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 113/467 (24%), Positives = 207/467 (44%), Gaps = 50/467 (10%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN----- 72 C T +PL PT + ++ N D +WW++++D LN+L+ AL N Sbjct: 18 CQTTTITTASRVPL-PTAYESAPAR-ADNTDIRRWWQAWHDPVLNQLITEALANNPDLAI 75 Query: 73 ----LTILQATERINAAKE--------NILSVRADL--------FPSSYASISHRFIPNL 112 L QAT R+ A N + ADL S +HR + L Sbjct: 76 ARSRLKEAQATTRLADADRGATIGLGLNAGHLDADLDNPLGGTPLARSDKINTHRTL--L 133 Query: 113 KTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +N L + W+ DLFGQ++ +++ ++ Q IA+L + + + +Y+ AR + Sbjct: 134 ASN----LSAKWEADLFGQKQSDADAARYAALASAEQTHIAQLQIAAAVADAYLQARALE 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R +A + + +K ++ G T+ + ++ + + + TL Sbjct: 190 ARQRLADENIVTLEKLAHYVEARYRAGHTTAFEKTEAQSHLSAARAARSTLAAERAAQAR 249 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIRYQEKKLADSV 289 I+ LLG ++ Q +++ + P G P LI RPD+R + ++ Sbjct: 250 KIAVLLGKTPQDY----QLPASSADILAHPPAAPGGQTPQGLIERRPDLRARAAEINARA 305 Query: 290 AKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWS----FGPKLYLPIFDKGKIKSN 343 AK+ AK+DLYP L+LN G+ L D+ NT S G L +P+F G++++N Sbjct: 306 AKVASAKADLYPRLTLNFLGNGILNIDSD----NTQKSLISLLGASLQVPLFTNGRVQAN 361 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I A++ + + + +T+L A+ +V+NA + + L A + +K + + Sbjct: 362 IDAADARLKTALLQYDQTLLQALADVDNAYQASDALATQTRLLAQARDEAEKQATDAEKL 421 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G +L D L + + + ++ A++ + LY A+G G+ Sbjct: 422 YRYGNKTLADTLSARLSANQAAENQLRSQLAQAQTLIALYKALGGGW 468 >gi|237716766|ref|ZP_04547247.1| outer membrane protein oprM [Bacteroides sp. D1] gi|294809613|ref|ZP_06768306.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] gi|229442749|gb|EEO48540.1| outer membrane protein oprM [Bacteroides sp. D1] gi|294443225|gb|EFG11999.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides xylanisolvens SD CC 1b] Length = 463 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 117/465 (25%), Positives = 206/465 (44%), Gaps = 45/465 (9%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 13 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTANFGN---LPWREVFTDPQLQS 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ 119 L++ L+QN + A I AA+ +L+ + P S +IS N K + T Sbjct: 70 LIETGLKQNTDLQSAILSIKAAQAPLLAAKLAYVPALALSPQGTISS--FDNSKASKTYS 127 Query: 120 L--DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFKER 173 L + W+I LFG + ++ D A Q K V +++I + Y + Sbjct: 128 LPVTASWEISLFG---GLLNAKRGADVAVKQAKAYKQAVQTQIIANVANLYYTLLMLDRQ 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNV 230 + I + ++ K+N E A ++ +E A + + IP +E+S R Sbjct: 185 LEITRETAEILKRNAETME-AMKNAAMYNINSAGVEQSKAAYAQVMASIPEIEQSIREVE 243 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +++STLLG E ++Q+ + Q P+ + ++GIP L+ NRPD++ E LA + Sbjct: 244 NSLSTLLG----EAPRHIQRGTIEKQILPSEF---SVGIPIQLLSNRPDVKAAEMSLASA 296 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A+S YP ++L+GS T+ PG + G L P+F G + + Sbjct: 297 YYNTNSARSAFYPQITLSGSAGWTNSAGSAIINPGKFLATAIG-SLTQPLFYHGANIAKL 355 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + A++ ++ +++Q+T+LNA EV NAL+ + + V Q VE KK+ + + Sbjct: 356 KMAKAQEEQAKLSFQQTLLNAGSEVSNALSLYQKTSEKVESRQMQVESAKKASEDTKELF 415 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++L ++A ++ ++ V LY A+G G Sbjct: 416 NLGTSTYLEVLSAQQAYLSAQISQVSDCFDRMQAVVSLYQALGGG 460 >gi|160884019|ref|ZP_02065022.1| hypothetical protein BACOVA_01993 [Bacteroides ovatus ATCC 8483] gi|262405541|ref|ZP_06082091.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644581|ref|ZP_06722335.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] gi|156110749|gb|EDO12494.1| hypothetical protein BACOVA_01993 [Bacteroides ovatus ATCC 8483] gi|262356416|gb|EEZ05506.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292640134|gb|EFF58398.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CC 2a] Length = 467 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 117/465 (25%), Positives = 206/465 (44%), Gaps = 45/465 (9%) Query: 13 VLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 LL+ C + Y +P P+ + ++ N N L W E F D L Sbjct: 17 ALLSSCHIYKSYDRPEDITTSGLYRDPVADNDTLVSDTANFGN---LPWREVFTDPQLQS 73 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ 119 L++ L+QN + A I AA+ +L+ + P S +IS N K + T Sbjct: 74 LIETGLKQNTDLQSAILSIKAAQAPLLAAKLAYVPALALSPQGTISS--FDNSKASKTYS 131 Query: 120 L--DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFKER 173 L + W+I LFG + ++ D A Q K V +++I + Y + Sbjct: 132 LPVTASWEISLFG---GLLNAKRGADVAVKQAKAYKQAVQTQIIANVANLYYTLLMLDRQ 188 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIESDIPTLEKSFRMNV 230 + I + ++ K+N E A ++ +E A + + IP +E+S R Sbjct: 189 LEITRETAEILKRNAETME-AMKNAAMYNINSAGVEQSKAAYAQVMASIPEIEQSIREVE 247 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 +++STLLG E ++Q+ + Q P+ + ++GIP L+ NRPD++ E LA + Sbjct: 248 NSLSTLLG----EAPRHIQRGTIEKQILPSEF---SVGIPIQLLSNRPDVKAAEMSLASA 300 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A+S YP ++L+GS T+ PG + G L P+F G + + Sbjct: 301 YYNTNSARSAFYPQITLSGSAGWTNSAGSAIINPGKFLATAIG-SLTQPLFYHGANIAKL 359 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + A++ ++ +++Q+T+LNA EV NAL+ + + V Q VE KK+ + + Sbjct: 360 KMAKAQEEQAKLSFQQTLLNAGSEVSNALSLYQKTSEKVESRQMQVESAKKASEDTKELF 419 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++L ++A ++ ++ V LY A+G G Sbjct: 420 NLGTSTYLEVLSAQQAYLSAQISQVSDCFDRMQAVVSLYQALGGG 464 >gi|296532997|ref|ZP_06895648.1| RND efflux system [Roseomonas cervicalis ATCC 49957] gi|296266676|gb|EFH12650.1| RND efflux system [Roseomonas cervicalis ATCC 49957] Length = 438 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 91/414 (21%), Positives = 184/414 (44%), Gaps = 21/414 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F L++L+ +A+ NL + QA RI A ++ A L PS A S Sbjct: 32 WWRGFGAPELDRLMALAMAGNLDLAQAEARIRQADASLRIAGASLLPSLDAGGSA---AR 88 Query: 112 LKTNSTGQ----------LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 ++ G+ L + +++DL+G + S+ +L++A ++ + L Sbjct: 89 QRSGGAGRATTRNSYAATLSASYEVDLWGGNAARLRSAGQSLEAARYSAAALGISTTASL 148 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y +ER+ + + ++ ++ + + + G + L L + E + E+ +P Sbjct: 149 ANTYFALLADRERLRVQTENVEAARRVLGVIRSQVQAGTATGLDLAQQETVVAQQEAQLP 208 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L +S V+ I+ L+G P + ++ + P + G PA+L+ RPD+R Sbjct: 209 ALRQSIDQGVNAIALLVGLPPEQ----VRVAGGGLEGLRVPPASPGQPAELLARRPDVRQ 264 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 E LA + A I +A++ L PSL+L+ ++ WS L +FD Sbjct: 265 AEANLAAAQANIDVARAALLPSLTLSAQGGVSGAVLGTLLRPEQQIWSVAASLAQSVFDG 324 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + + +E+ A+E ++ +L+A+++VE+AL ++ E A ++ Sbjct: 325 GARRGQVALSEAQAEELLGAYRYAILDALRDVEDALVALRETTAQEEAYAEAASRAARAA 384 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ R G +L+ +L+ ++ L A+ ++ L+ A+G G+ Sbjct: 385 QIAEAQLRLGTINLITLLNTQQTLFSARNALVAARLSRLQAATGLFRALGGGWR 438 >gi|223041890|ref|ZP_03612076.1| outer membrane protein [Actinobacillus minor 202] gi|208435931|gb|ACI28440.1| outer membrane protein [Actinobacillus minor 202] Length = 464 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 118/470 (25%), Positives = 212/470 (45%), Gaps = 44/470 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 ++FI L C T+ + L PTQF ++ + + +WW+++ D L++L++ Sbjct: 10 AIFIAFLTACNATQVETQSSIAL-PTQFE-QTAQATGSQNVQQWWQNWQDPQLSRLIEQG 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLKTN----------- 115 LQ NL I A R+ A+ N AD+ + SIS I N+ + Sbjct: 68 LQNNLDIALAQTRLKEAQANSQYAEADMGVNVGLNGSISGG-ISNINSGIINPSSSRSSG 126 Query: 116 STGQLDSDWKIDLFGQRRHIESSLANLDSAY-------AQVDIAKLNVISKLIPSYIDAR 168 G + W+ D+FGQ+R ++ D AY Q+ +L V S++ +Y Sbjct: 127 GYGGFSAAWEPDIFGQKR------SDADVAYYAALGQQEQLYGTQLLVASQIADNYFKIF 180 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +++ ++ Q L + + +F G + + ++ A+I ++++ TL Sbjct: 181 ATEQQKALISQNLTVLAELQRYIQGRFNAGQATAYEVNEIAAQITALQAKQTTLTAQAVS 240 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 NI+ LLG F ++ KQ N PNL P+D+I RPD+R +++ Sbjct: 241 FERNIAILLGQTPQGF--HLVKQGNPLAKIPNLPAGQQ---PSDVINRRPDLRANAQQIR 295 Query: 287 DSVAKIGIAKSDLYPS-----LSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKI 340 AK+ AK+DL P L G I L +D S G + S G + LPIF G+I Sbjct: 296 AYSAKLASAKADLLPRFDIQFLGQGGRIGLNNDLSHLSGIGSFVSAG--VQLPIFTNGRI 353 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++NI A++ + I + +T+L A+ EV+N+ + L V+ +K S Sbjct: 354 EANIDAADARLKGAVIQYDKTLLTALAEVDNSYQMQQSLARQTALLTKTVQQAQKQAKDS 413 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ G +L L + + + L ++ A++ + +Y A+G G+ Sbjct: 414 QLLFKHGDKTLDVALRAKISALNYQEQLVQSRLAQAQNLLAVYKALGGGW 463 >gi|84569891|gb|ABC59229.1| CmeC [Campylobacter jejuni] Length = 485 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 110/464 (23%), Positives = 203/464 (43%), Gaps = 35/464 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNKLV 65 +L++ C++ P P +S N ++ + T WW+ F+D +LNK+V Sbjct: 15 LLISACSLSPNLNIPE-----ANYSTDNQLGALSWEKENNSSITKNWWKDFDDENLNKVV 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ--- 119 +AL+ N + A + A + + L P S+S + N +N TG+ Sbjct: 70 DLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSVSGSRAKTAINAPSNRTGEVSY 129 Query: 120 -------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 130 GNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVQTYFNLENAY 189 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 190 ENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLNKE 245 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLADSV 289 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 246 NYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQQN 305 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 306 YLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNVSL 365 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 366 AKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERYDI 425 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 426 GEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|331672822|ref|ZP_08373608.1| putative outer membrane efflux lipoprotein [Escherichia coli TA280] gi|331070043|gb|EGI41412.1| putative outer membrane efflux lipoprotein [Escherichia coli TA280] Length = 457 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|221065517|ref|ZP_03541622.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220710540|gb|EED65908.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 435 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 111/436 (25%), Positives = 209/436 (47%), Gaps = 29/436 (6%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN--- 88 +P +++ I T WW+SF T L+ LV+ A +L + A R+ A+ Sbjct: 5 IPQSWALERGAGSEEIST-SWWQSFGSTELSALVEQAASHSLDVAAAVARVQQAEARAAY 63 Query: 89 -----ILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANL 142 + V AD + A++ N T G L S +++D +G++R + +++ + Sbjct: 64 AGAALLPEVNADFGATRSAALDSHTERNASTWRVG-LSSSYELDFWGRQRALRDAAESGR 122 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 ++ + +L V + + +++ +ER IA L++ ++ ++L + GA S Sbjct: 123 QASVFDRETVRLTVTASVAQAWLQCVGLRERAEIARLNLEISERLLKLVESRARYGAASS 182 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + L + ++ + + + +L K + H + LL + M S NL +P Sbjct: 183 VELAQQRGQVAAQQRALASLRKQT-ADAHAVLALLSGQWS-----MDPVSETSLSNLKVP 236 Query: 263 -INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY- 320 I +G P DLI RPD+ E L + A +G A++ + P ++L S L ++ G Sbjct: 237 GIGLGAPVDLITRRPDMAKAEALLLAADANLGAARAAMLPRVTL--SAGLNSESGTLGRV 294 Query: 321 --NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 N S G + PIFD G++ S+ A + QE I +++ +L A +V+ AL +++ Sbjct: 295 LENPLSSLGAGILAPIFDAGRLASSRDLAAAQKQELVIAYRQAILQAFGDVQTALNAVDG 354 Query: 379 DKKIVTKLQHAVEL--HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ-L 435 +K L AVEL ++++SL+ Y+ G +L +LD++R A DL++ RQ Sbjct: 355 VEK--QALAQAVELAQAQRALSLAESRYKAGADNLQTLLDVQR-VAYQSRDLAVQIRQER 411 Query: 436 AKSYVDLYIAIGSGYN 451 ++ + LY A+G G+ Sbjct: 412 LQASIALYRALGGGWR 427 >gi|298385969|ref|ZP_06995526.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] gi|298261197|gb|EFI04064.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] Length = 454 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 105/457 (22%), Positives = 207/457 (45%), Gaps = 41/457 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L+GC + +Y KP + P G +++ + + W E F D L L++ L+ N Sbjct: 15 LSGCGIYTKY-KPATSV-PDDLYGGEVVTEDTAGLGNMDWRELFTDPHLQSLIETGLRTN 72 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKID 127 A R+ A+ ++S + P+ +A + + TN Q + + W++D Sbjct: 73 TDYQSAQLRVEEAQAVLMSAKLAFLPA-FALSPQGTVSSFDTNKATQGYSLPVTASWELD 131 Query: 128 LFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILDL 183 +FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 132 VFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLIISRQTEEA 188 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL Sbjct: 189 WKETVASTRSLMNAGLANESAVSQMEATYYQVQGSVLDLQQQINQVENSLALLLAETPRN 248 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + ++ +GIP ++ RPD+R E+ L + A+S YPS+ Sbjct: 249 Y-----ERGTLADQQFPTDFAVGIPVRMLAARPDVRSAERTLEAAFYGTNAARSAFYPSI 303 Query: 304 SLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L+GS T+ PG + G L P+F+KG++ + R A + +E + +Q Sbjct: 304 TLSGSAGWTNSVGSMILNPGKFLASAVG-SLTQPLFNKGQVVTQYRIARAQQEEAALGFQ 362 Query: 360 ETVLNAIKEVENALTS--INEDKKI-----VTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +T+LNA EV +ALT+ ++ K+I + LQ AV +S SL M + L Sbjct: 363 QTLLNAGSEVNDALTAYQTSQGKRILLDKQIASLQTAV----RSTSLLM---EHTNTTYL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L ++ ++ + +S ++LY A+G G Sbjct: 416 EVLTARQSLLSAQLSQTANHFTEIQSLINLYRALGGG 452 >gi|253564458|ref|ZP_04841915.1| outer membrane protein oprM [Bacteroides sp. 3_2_5] gi|251948234|gb|EES88516.1| outer membrane protein oprM [Bacteroides sp. 3_2_5] gi|301161212|emb|CBW20750.1| putative outer membrane lipoprotein [Bacteroides fragilis 638R] Length = 463 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 214/465 (46%), Gaps = 45/465 (9%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ ++ + +N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPKDIEASGLYRDTVSVADTLVSDTVNFGNLPWREVFTDPQLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-QLDS 122 L N +L A ++ A+ +++S R PS S F + T + + Sbjct: 73 QGLTHNTDLLTAALKVKEAQASLMSARLAYAPSLGLSPQGTISSFDKHAATKTYSLPATA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFG+ +R ++ +L AY Q + +IS + +Y ++ I Sbjct: 133 SWEIDLFGKLLNAKRGVQVTLLQ-TKAYRQA--VQTQIISGIANTYYTLLMLDRQLDITE 189 Query: 179 QILDLYKKNIELSHLKFTQGA----TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 Q D+ K+N+E ++ + A T+ + + +A + + IP ++KS R + +S Sbjct: 190 QTADIMKRNVE--TMQAMKDAAMFNTTSAGVEQSKAAYAQVLASIPAIQKSIREAENAMS 247 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL P T +++Q L ++G+P L+ NRPD++ E LA + Sbjct: 248 MLLAQAPQTIKRGVLEEQ------QLPEDFSVGVPLQLLSNRPDVKAAEMALAGTYYNAN 301 Query: 294 IAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ YP ++++GS T+ PG G L P+F +G + ++ A++ Sbjct: 302 SARAAFYPQITISGSAGWTNSAGSAIINPGKLLASVLG-SLTQPLFYRGANIARLKIAKA 360 Query: 350 SAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +E + +Q+++LNA EV NAL +K KLQ VE +K+ + ++ G Sbjct: 361 QQEEAKLAFQQSLLNAGSEVSNALYQYQSASEKTASRKLQ--VESSEKASEYTKELFKLG 418 Query: 408 RYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L E++ +A++ +V+ + + Q + V LY A+G G Sbjct: 419 TSTYLEVLSAEQSLLSARLSQVNDTFDRMQ---AVVSLYQALGGG 460 >gi|160898122|ref|YP_001563704.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160363706|gb|ABX35319.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 491 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 213/478 (44%), Gaps = 46/478 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-----HMPL------LPTQFSIGNSKNLIN---IDTLKW 52 + L LAGC GP++ +P P+ PTQF G ++ L+ I+T +W Sbjct: 23 VAGLVTAGLAGCAAGPDFQRPTARYTATPVADRTASAPTQF--GETQRLVEGLPIET-QW 79 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSVRADL 96 W+S ++L+ L+ A + T+ + + A+E + S R + Sbjct: 80 WQSLGSSTLDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQRQQM 139 Query: 97 FPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLN 155 PSS +L S G + + +DL G RR +E+ A D +++ A+L Sbjct: 140 SPSSQGLSGDARQFSLYNASVG---AHYNLDLAGGNRRALEALAARADYRRFELNAARLA 196 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + I ++ IL + + + L+H + G S + L+A+ + Sbjct: 197 LAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQAEQT 256 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++P L K + H ++ L G P T + +F L + + + +P++L+R Sbjct: 257 RAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTL--ADF--TLPVEMPLVVPSELVRR 312 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDI+ E L + A G+A + LYP ++L+ GS ALT F G + W +L Sbjct: 313 RPDIQASEALLHAANADYGVAVAKLYPQINLSANLGSQALTTGTLFGGGSAVWGLVAQLT 372 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+F+ G + + R A ++ +Q VL +++ V + L ++ D + +T L A Sbjct: 373 QPLFNPG-LPAEKRAALAAFDAAAANYQSVVLESLRNVADTLRAVESDAQTLTALAAADM 431 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + S+ YR G S L +L ++ + +++ A+ Q V LY A+G G Sbjct: 432 AAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAAQAQRLVDSVALYQALGGG 489 >gi|121592762|ref|YP_984658.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42] gi|120604842|gb|ABM40582.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax sp. JS42] Length = 472 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 88/452 (19%), Positives = 205/452 (45%), Gaps = 20/452 (4%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 LL+ C++ P++ P P+ P + + + W + F + L L+++ L+ N Sbjct: 15 LLSACSMVPKHQTPAAPV-PADWPQPTAGGTQAAAPVNWQQFFGNAQLRTLIELTLENNR 73 Query: 74 TILQATERINAAKENILSVRADLFPS--SYASISHRFIP----------NLKTNSTGQLD 121 + A + A + +AD P+ + A S + +P T S G Sbjct: 74 DLRAAALNVQAFQALYRIQKADSLPTIGAEAGGSRQRVPADVAGAPQAVTASTYSVGLGM 133 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +++DLFG+ + + + +L N + + +L++++ +++ + ++ + + + Sbjct: 134 AAYELDLFGRVQSLNDQALQNYLAMDSTRKATQLSLVAATASAWMTWQADQQLLDVVTRT 193 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L ++ ++L + G + L + + + S + ++ +++ + L+G P Sbjct: 194 LAANERALDLIVAQVDNGIATDLQRHQAQTAVDSARAQHAQFTRAVEQDLNALQALVGAP 253 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + ++Q + +G+P+ ++ RPDI E++L + A IG A++ + Sbjct: 254 LPPSVLQTRVGIADWQ---LAQLPVGLPSQVLAQRPDILAAEQQLRAANANIGAARAAFF 310 Query: 301 PSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P ++L S+ + F G + WSF P++ +P+F+ G++ +N+ A + Sbjct: 311 PRIALTASVGTASSDLSGLFNGGSGAWSFAPQISIPLFNAGRLAANLDYATLQKDMRVAQ 370 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + A +EV + L++ + + + Q V+ K + L+ + Y G L ++D Sbjct: 371 YEKAIQTAFREVADGLSARHTFVRQLQANQSLVQASGKYLDLAQLRYDAGVEGYLTVIDA 430 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R E+ Q A S V L+ A+G G Sbjct: 431 QRNLLSAELGAVQTGLQQALSEVQLFKALGGG 462 >gi|329114187|ref|ZP_08242949.1| Outer membrane protein OprM [Acetobacter pomorum DM001] gi|326696263|gb|EGE47942.1| Outer membrane protein OprM [Acetobacter pomorum DM001] Length = 521 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 213/486 (43%), Gaps = 48/486 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQF-----SIG---NSKNLINIDTLKWWESF 56 RA + + L GC VGP Y +P + P QF + G +L I WW + Sbjct: 19 RAASLMAPLALMGCMVGPNYKRPSAIISP-QFKELRPAAGWNYAQPSLAAIPKGAWWTLY 77 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------------- 99 ND LN+L N + Q R A+ I ++RA+L+P+ Sbjct: 78 NDPLLNQLESQVEINNQNVAQYEARYRNARAAINAIRAELYPTLSGALSFNRQSSGRGSR 137 Query: 100 ------SYASISHRFIPNLKTNSTGQ-LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI 151 +Y + N N+ + W +DL+G RR I++ + ++ A + Sbjct: 138 SSGTIINYGDTTSSIASNTTENTYAMGASASWDLDLWGNIRRQIQAQVTEAQASAADLAN 197 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AKL+ ++L +Y + R+ + + +D Y+++ +++ ++ G +L++ + + Sbjct: 198 AKLSYQAQLATAYFNLRYQDSLHDLLQKNVDFYERSYQITKNQYDAGTADPTTLMQAKTQ 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPA 269 ++ + + + H I+ L+G PA + + + IP I + +P+ Sbjct: 258 LEQTRAQATATDAARAGYEHAIAILMGKSPADLSIPHGALTRD-------IPAIPVAVPS 310 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSF 326 +L++ RPD+ E+++ + A+IG A + YP + L S + + D N W+ Sbjct: 311 ELLQRRPDVSAAERRMEEYNAQIGAALAAFYPDVKLTASYSYSGDPVGALVQVANRIWAL 370 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G +F+ G + +R A ++ +++TVL A+++VE+ L ++ + Sbjct: 371 GASATETLFEGGARTAAVREANTNYNYYVAAYRQTVLTALQQVEDQLANLRVLADQADQQ 430 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIA 445 AVE K++ +S Y G ++ E A + E L I + ++ S V L A Sbjct: 431 AVAVEAANKAVQISFNQYMAGTQIYTTVITAEVTALSNAETALQIQQSRILDS-VTLIEA 489 Query: 446 IGSGYN 451 +G G++ Sbjct: 490 LGGGWD 495 >gi|148546921|ref|YP_001267023.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148510979|gb|ABQ77839.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 479 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 101/423 (23%), Positives = 207/423 (48%), Gaps = 32/423 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR--- 107 WW+SF +LN+LV+ A + + A R+ A+ + + L P + A+ ++R Sbjct: 54 WWQSFGSPTLNQLVEQARTDSFEVGAAMARVRQAQADAVIAGGPLLPEVTGAANANRERL 113 Query: 108 ----FIPNLKTNSTGQ--------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKL 154 L ++ T + L + +++D +G ES+L NL ++ +L Sbjct: 114 QHGDGYSQLNSSPTQRTTHYLDVALKASYEVDFWGGNAAARESALHNLQASEFDRATVEL 173 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ K+ SY+ A F+++ IA L ++ ++L +F G+ + L L + ++ + + Sbjct: 174 TLLGKVADSYMQALAFQQQGRIADLNLANAERVLQLVQTRFDAGSATALELAQQQSLVAA 233 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + P ++ R + ++TL+G P + +Q + F+ + I+ G+P++LI Sbjct: 234 QQRQRPLYQQQAREALITLATLVGQPVQD----LQLGNTRFEQLNWPSIDAGLPSELISR 289 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYL 332 RPDI E KLA + A + +A++ + P L+L + D+ FP N S L Sbjct: 290 RPDIANAEAKLAAAQANVRVARAAMLPKLNLTLIVGSGADH-FPDVLRNPFTSLAAGLVT 348 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVE 391 P+FD G++ + +A ++ E ++ +L +VE AL +++ D+++ + A+E Sbjct: 349 PVFDNGRLGAERDKAVAAQDELLQDYRGAILAGFSDVEKALNTLDGIDRQLHWQ---AIE 405 Query: 392 LH--KKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGS 448 L +K+ ++ Y+ G LL +L +R + + D+ + +++ S + LY A+G Sbjct: 406 LQQARKAFDIAESRYQAGAEDLLTVLQTQRTLYQAQDEDVQLRLKRVMGS-IALYKALGG 464 Query: 449 GYN 451 G+ Sbjct: 465 GWQ 467 >gi|218508699|ref|ZP_03506577.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli Brasil 5] Length = 149 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 11/150 (7%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MPL P +F G +K++ ++ T WW +F D LN V+ L+QNLT+ QA ERINAA N Sbjct: 1 MPL-PAKFGEGGTKSVGDVATAAWWTAFKDPRLNGYVQAGLEQNLTVQQAIERINAASAN 59 Query: 89 ILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESS 138 + A PS SH R + + S G + W +DLFG +R ES+ Sbjct: 60 VTIAGAGGLPSLNVGASHTVSGQKGELRTQFDTRNTSAGDVQLSWLLDLFGLYKRSTESA 119 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 A+LDSAYA D+AKL ++ L+ SYID R Sbjct: 120 AASLDSAYASADVAKLTLVQDLVSSYIDVR 149 >gi|325272578|ref|ZP_08138943.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324102288|gb|EGB99769.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 278 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 7/276 (2%) Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q LDL +++++L+ G + + + + + KS+ +++P + ++ ++ LL Sbjct: 1 RQSLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERETGLYTLAALL 60 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P + + N +P+ G A L++ RPD+R E++LA + A IG+A Sbjct: 61 AKPVDQLPAGTADCAELPHLNQLVPVGDG--AALLKRRPDVRQAERQLAAATASIGVATG 118 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 LYP +S+ G+I + + P N W FGP++ I G ++ IR AE+S Q Sbjct: 119 ALYPDISIGAQVGTIGILENLGEPSTN-RWGFGPQISWSIPTNG-TRARIRMAEASTQAA 176 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + VLNAI+E + L + L A + K + + Y+ GR S L Sbjct: 177 LANFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKDAADQTHRYYQAGRESFLAD 236 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L R + L+ A Q+A + +++A+G G+ Sbjct: 237 LQATRTYTDMRAQLAAADSQVALGQIGVFLALGGGW 272 >gi|148253081|ref|YP_001237666.1| putative outer membrane lipoprotein (NodT-like), RND efflux system [Bradyrhizobium sp. BTAi1] gi|146405254|gb|ABQ33760.1| putative outer membrane lipoprotein (NodT-like), RND efflux system [Bradyrhizobium sp. BTAi1] Length = 543 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 113/493 (22%), Positives = 211/493 (42%), Gaps = 59/493 (11%) Query: 5 RAIF--SLFIVLLAGCTVGPEYTKPHMP--------------LLPTQFSIGNSKNLINID 48 R++F S +LL+ C VGP+++ P P P I + + D Sbjct: 22 RSVFAASCAALLLSSCAVGPKFSSPPTPDVARYTPELLSSPHSSPESPGIAGQRFIEGGD 81 Query: 49 -TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASIS 105 +WW +F LN L+++A+ + T+ + I A N L+ R FP S + S Sbjct: 82 IPTRWWAAFRSQPLNDLIRLAVDHSPTLQASEAAIRVANYNALAQRGLFFPQISGSSGPS 141 Query: 106 HRFIPNLKTNSTGQLDS---------------DWKIDLFGQR-RHIESSLANLDSAYAQV 149 + N T LDS + D++G R +E+ A + A+ Q+ Sbjct: 142 QTLLTNAGTVFGVPLDSVPQTRYSLVTHQVTVSFLPDVWGANIRAVENLDALTEQAHFQL 201 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + A L + + ++ + I + +I Q++ + ++ +EL +F G ++ ++ E Sbjct: 202 EAAHLALTANVVTAAIQEASLRGQIEGIEQVIKVVREILELLKKQFNAGQAAQTDVLTQE 261 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPIN--IG 266 A + +E + L K + ++ L G + A E L + ++ +P N + Sbjct: 262 AALAQVEQTLLPLRKQLAVQRDLLTALAGQFSADEVLQKFDLK------HIALPRNLPVS 315 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF 326 +P+ L+R RPD+R E + + A++G+A + PS L+ + T GYN SF Sbjct: 316 LPSTLVRQRPDVRAAEAAMHAASAQVGVAIAARLPSFPLSANGGST------GYNFAQSF 369 Query: 327 GPK--LYL-------PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 P Y+ PIFD + + AE++ + +++TV+ A + V +AL S+ Sbjct: 370 TPGTGFYVLAASVTGPIFDGFTLYHKQKSAEAALDQADALYRQTVITAFQNVADALRSLQ 429 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +D V + KKS+ L G + +L ++A + A+ Sbjct: 430 QDTPAVQAAIKSEMATKKSLDLIRKQLVLGLVNQATVLTAQQAYLSAVIARVQAEATRLS 489 Query: 438 SYVDLYIAIGSGY 450 L++A+G G+ Sbjct: 490 DVAALFMALGGGW 502 >gi|85713826|ref|ZP_01044816.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter sp. Nb-311A] gi|85699730|gb|EAQ37597.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter sp. Nb-311A] Length = 488 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 211/468 (45%), Gaps = 47/468 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQF-----SIGN---SKNLINIDTL--KWWESFNDTSLNKLVK 66 GC VGP++ KP P P F G+ ++ + +WWE F +LN++V+ Sbjct: 13 GCAVGPDF-KPQAP--PETFRYLSDPAGDRVPGHPVVRAAEIPPQWWELFRSPALNRIVE 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIP-----NLKTNS--- 116 + N + A + A+ N L+ R LFPS S + +P L++N+ Sbjct: 70 DGIAHNADLAAAEAAVRVAQANALAQRGALFPSVTGGFNSSRQQVPVDLQSPLESNAHLL 129 Query: 117 ---TGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TGQ+ + D++ G RR +ES+ + + Q + L + S + + I+ + Sbjct: 130 SLHTGQVTVSYLADVWGGTRRLVESADSQAEMRAFQREGVYLTLASNIALAAIEEGRVRG 189 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +I+ ++L L + + L + QG ++ + E + +P LEK H Sbjct: 190 QIAATRRVLGLQAEVLRLLRRQQEQGQIAQTDVAAQETAVAQTRLLLPNLEKQLAQQRHL 249 Query: 233 ISTLLGYPATEFLHYMQKQS---NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +S L G +++ K++ +F+ +P++ +PADL+R RPDI+ E L + Sbjct: 250 LSFLTGRLSSD----APKETFDLGSFRMPRRLPLS--LPADLVRQRPDIQAAEANLHATN 303 Query: 290 AKIGIAKSDLYPSLSL---NGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A ++ P ++L GS A + PG G IFD G + + R Sbjct: 304 AMIGVAIANRLPQITLVGNGGSAAAKFAQLATPGAALGMIAG-NAAQTIFDAGTLANKQR 362 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE + ++ VL A + V + L ++ + ++ A +S++L Sbjct: 363 AAEEETNQSLAQYRSVVLAAFQNVADVLRALQAGTRAISAATDAERSATESITLVRKQVD 422 Query: 406 QGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 QG+ S+ +L ++A T+ +D A QLA + V L+ A+G G+ Sbjct: 423 QGQISVPLLLAAQQAYLQTSLARLDAQAA--QLANT-VALFQALGGGW 467 >gi|126458566|ref|YP_001074870.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|134279309|ref|ZP_01766022.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|167848811|ref|ZP_02474319.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei B7210] gi|242312197|ref|ZP_04811214.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|126232334|gb|ABN95747.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|134249728|gb|EBA49809.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|242135436|gb|EES21839.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 460 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 189/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPTLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|311106254|ref|YP_003979107.1| multidrug efflux system lipoprotein 2 [Achromobacter xylosoxidans A8] gi|310760943|gb|ADP16392.1| multidrug efflux system lipoprotein 2 [Achromobacter xylosoxidans A8] Length = 511 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 105/432 (24%), Positives = 192/432 (44%), Gaps = 37/432 (8%) Query: 48 DTLK--WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYA 102 D L+ WW F D +LN L A N T+ A R+ ++ R+ LFP + + Sbjct: 60 DALRGAWWTLFQDPALNALQTAAQDANPTLHAAYARLQQSRAQHRQARSALFPRLDAGFG 119 Query: 103 SISHRFIP---NLKTNSTGQLDSDWKID--------LFGQ-RRHIESSLANLDSAYAQVD 150 R P + + N + W+ D LFG+ I ++ A + A Sbjct: 120 PTRQRESPASYSGRDNGPASTTTLWRADAAVAYEADLFGRVSSTIGAASAEQARSGALYR 179 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + L + + + +Y R + I Q L L ++ LS ++ G +L L + Sbjct: 180 LTLLALQADVADTYFLIRELDTQHQIYQQTLALRERGFALSQMRLEAGDGGELELERARG 239 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--NLYIPINIGIP 268 E+++ +D ++ H ++ LLG +F S +P + + + G+P Sbjct: 240 ELEAARADALGAQRQRASAEHALAILLGKAPADF-------SLPPEPLRRIELAVPPGLP 292 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS--- 325 ++L+ RPDI E+ +A + A+IG A++ +P L L G+ ++S WS Sbjct: 293 SELLERRPDIAAAERAMAAANARIGAARAAFFPRLELTGAAGF--ESSSLSQLFQWSSRT 350 Query: 326 ------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L LPI D G ++++ A ++ E+ ++ET+LNA +EVE+ L + Sbjct: 351 FLLGPFLGTALSLPILDGGARQADLDAARAAHDEETARYRETLLNAFREVEDNLMHLRIM 410 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 T A ++S LS + Y G ++ LD++D +R+ + ++ + A++ Sbjct: 411 AAQQTAQDRARLAAQRSAELSRLQYETGTHTQLDVIDADRSLLQQQLASARLDGDQARTT 470 Query: 440 VDLYIAIGSGYN 451 V L A+G G++ Sbjct: 471 VRLIRALGGGWD 482 >gi|294665437|ref|ZP_06730724.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604805|gb|EFF48169.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 505 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 99/423 (23%), Positives = 186/423 (43%), Gaps = 31/423 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + D L+ L+ LQ + ++ A R+ A+ I S +A+ PS S + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLAAADARLRQAQARIGSAQAERGPSLSVSGGYTGL-Q 132 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 L + G+ LD + IDL+G +R E+++ +A A+LN+ Sbjct: 133 LPESMVGEELGGSYGGSAQVVLDFRYGIDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLS 192 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y + +A+ L +K +EL+ + + G S+L + + +A + + + Sbjct: 193 SAIAEGYAQLAYAWSLHDLANDELSRAQKTLELTRQRRSAGIDSELQVRQAQARVPAAQQ 252 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + ++ ++ L+G L + F L + +PADL+ RPD Sbjct: 253 QLQSAQQQIDEARTALAALVGQGPDRGLDIARP---VFGAGLATQLPSMLPADLLGRRPD 309 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSI-----ALTHDNSFPGYNTHWSFGPK 329 + ++ + I +AK+ YPSL +L G I L S G P Sbjct: 310 VVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLESGSVLGL-----VAPA 364 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD GK+++N+ +++ + + V++A++EV + +T++ ++ A Sbjct: 365 LSLPIFDGGKLRANLAGSDAQYDLAVANYNQKVISALREVADQVTAVRSLEQRAQAQNDA 424 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ + L+ YR G S LD+L ++ L+ + Q + V L A+G G Sbjct: 425 VQTATAAFDLAQQRYRAGIGSYLDVLSVQEQLLVARQRLAGLQSQQLLASVRLQRALGGG 484 Query: 450 YNP 452 + P Sbjct: 485 FTP 487 >gi|262191716|ref|ZP_06049891.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae CT 5369-93] gi|262032411|gb|EEY50974.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae CT 5369-93] Length = 484 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 215/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 VRWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|170735472|ref|YP_001774586.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169821510|gb|ACA96091.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 501 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 206/466 (44%), Gaps = 43/466 (9%) Query: 18 CTVGPEYTKPHMPLLPTQF------SIGNSKNLINIDT-----LKWWESFNDTSLNKLVK 66 C+ P Y+ P + +P + S G + + + WW F+D LN L Sbjct: 25 CSTLPPYSPPAV-AVPAHYAGAPAASAGQAGWHVAMPADAAARGAWWTVFDDADLNALEA 83 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--------RFIPNLKTNST- 117 N T+ +A + A+ + A P+ A S R +L +T Sbjct: 84 RVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTITAGASQSRARVSQNRLGSSLAGKTTP 143 Query: 118 ---GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + + W+ DLFG+ R + + AN ++ A + KL+V ++L Y R + Sbjct: 144 DYQAGVAASWEPDLFGRVRDAVTGAQANAAASAADLQAVKLSVTAELATDYFALRSLDTQ 203 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + Y + L + GA ++ + E +++S + ++ S H I Sbjct: 204 KQLLDDSVRAYADALTLLKQQLAAGAIDASAVAQAETQLESTRTQDTDIDASRAQLQHAI 263 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +TL+G A+ F + Q+ ++P I G+P+ L+ RPDI E+++A + A+I Sbjct: 264 ATLVGESASTFALPPRVQA------FHVPAIPAGVPSQLLERRPDIAAAERRVAAANAQI 317 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G A++ +P L L+ S L ++SF + WS GP+L +FD G+ +++R A Sbjct: 318 GEARAAFFPDLVLSASAGL--ESSFFAPWLAAPSLFWSLGPQLAGTLFDGGRRSASLRGA 375 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +++TVL A ++VE+ L++++ Q A + S+ L+ + G Sbjct: 376 HAQYDGAVADYRQTVLVAFQQVEDQLSALDALASEAGSQQRATDAADLSLRLTTNRFNAG 435 Query: 408 RYSLLDILDIE--RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S LD++ + T + D A+R ++ V L A+G G+ Sbjct: 436 AVSYLDVVTAQTIALTNRRTADQIDARR--VEAEVGLLKALGGGWQ 479 >gi|117623551|ref|YP_852464.1| putative outer membrane channel protein [Escherichia coli APEC O1] gi|218558283|ref|YP_002391196.1| outer membrane channel protein of an efflux system [Escherichia coli S88] gi|115512675|gb|ABJ00750.1| putative outer membrane channel protein [Escherichia coli APEC O1] gi|218365052|emb|CAR02755.1| putative outer membrane channel protein of an efflux system [Escherichia coli S88] gi|323949102|gb|EGB44994.1| NodT family protein efflux transporter [Escherichia coli H252] Length = 457 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTVTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|86153748|ref|ZP_01071951.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842709|gb|EAQ59921.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni HB93-13] Length = 492 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 204/466 (43%), Gaps = 35/466 (7%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------TLKWWESFNDTSLNK 63 F +L++ C++ P P +SI N ++ + T WW+ F+D +LNK Sbjct: 13 FTLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNSSITKNWWKDFDDENLNK 67 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ- 119 +V +AL+ N + A + A + + L P S S + N +N G+ Sbjct: 68 VVDLALKNNNDLKLAFIHMEQAATQLGIDFSSLLPKFDGSASGSRAKTAINAPSNRIGEV 127 Query: 120 ---------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L+ ++IDL+G+ R +S ++ ++ + A+L+VIS + +Y + + Sbjct: 128 SYGNDFKMGLNLSYEIDLWGKYRDTYRASKSSFKASEYDYEAARLSVISNTVQTYFNLVN 187 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 188 AYENENALKEAYESAKEIYRINDEKFQVGAVGEYELAQARANLESM----ALQYNEAKLN 243 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 N L + L+ + ++ ++Q NL I GI + ++ RPDI +KL Sbjct: 244 KENYLKALKILTSNDLNDILYKNQSYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQ 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 +G+A++ PSLSL G + D G + W+ G LPIF G+I N+ Sbjct: 304 QNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGSKTWNIGGNFTLPIFHWGEIYQNV 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ + E ++ +Q T++ A E+ AL + + Q + + +K+ ++ Y Sbjct: 364 NLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIRLQYDNAQASEQSYKRIYEIAKERY 423 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 424 DIGEMSLQDYLEARQNWLNAAVAFNNTKYSYANSIVDVIKAFGGGF 469 >gi|26247629|ref|NP_753669.1| hypothetical protein c1765 [Escherichia coli CFT073] gi|227886271|ref|ZP_04004076.1| outer membrane channel protein [Escherichia coli 83972] gi|300971695|ref|ZP_07171568.1| putative outer membrane efflux protein OprM [Escherichia coli MS 45-1] gi|301046138|ref|ZP_07193313.1| putative outer membrane efflux protein OprM [Escherichia coli MS 185-1] gi|26108031|gb|AAN80231.1|AE016760_90 Partial Putative outer membrane channel protein [Escherichia coli CFT073] gi|227836475|gb|EEJ46941.1| outer membrane channel protein [Escherichia coli 83972] gi|300301871|gb|EFJ58256.1| putative outer membrane efflux protein OprM [Escherichia coli MS 185-1] gi|300411181|gb|EFJ94719.1| putative outer membrane efflux protein OprM [Escherichia coli MS 45-1] gi|307553356|gb|ADN46131.1| multidrug efflux outer membrane protein EefC [Escherichia coli ABU 83972] gi|315295336|gb|EFU54666.1| putative outer membrane efflux protein OprM [Escherichia coli MS 153-1] Length = 457 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 101/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL +N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNRNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++ V +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKNVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|134095533|ref|YP_001100608.1| putative RND efflux system, outer membrane lipoprotein, NodT [Herminiimonas arsenicoxydans] gi|133739436|emb|CAL62486.1| Putative RND efflux system, outer membrane lipoprotein, NodT [Herminiimonas arsenicoxydans] Length = 499 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 110/483 (22%), Positives = 217/483 (44%), Gaps = 53/483 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTK--PHM--------PLLPTQFSIGNSKNL-----INIDTLK 51 I I L++ CTVGP+Y + P P++ T + GN++ I+ D Sbjct: 12 IVVTLIQLISACTVGPDYIRQPPPTETAYTKKDPIVTTADNNGNAQRFHTDAAISAD--- 68 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 WW F+ L + V +L+ N ++ A + ++ N+ + FP S S Sbjct: 69 WWNLFHSADLGEAVDRSLRNNASLQAAQASLKESQHNLQAGYGVFFPQIGGSFSATRQLP 128 Query: 106 --HRF-------IPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 RF I NL T + +D+FG +RR +E+ A D L Sbjct: 129 SAFRFGSASPVGIFNLFTLGAA---ISYTLDIFGGERRMVEALGAQADYQKYVALATYLT 185 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ + I + + Q++ ++ + ++ + G +++ L + + S Sbjct: 186 LSGNVVNTAIARAAYHAQYEATQQLILRQQEQLAVAENQAAHGIAPYATVLSLRSLLASS 245 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLI 272 ++ + + + H ++ L G A+ +++F L +P + + +P++L+ Sbjct: 246 QAALAVVAQKRDQADHLLANLQGTTASG------TYTSSFDLAQLELPQDLPLTLPSELV 299 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 R RPD+ E +L + A +G+A + L+PS SL + AL + N + WS G Sbjct: 300 RQRPDVLAAEAQLHVASAGVGVATAALFPSFSLGANYALGNTKLGNLSDSSSKFWSVGSG 359 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + +PIF G R A+ + Q+ +++TVL+A ++V + LT+I D + V + Sbjct: 360 VDVPIFQGGTAWHKRRAAQDAYQQALANYRQTVLSAFQQVADVLTAIEHDAQAVKAQAES 419 Query: 390 VELHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++++ L +NYR G S LD+L + + +K+ ++ R + L++A+G Sbjct: 420 LGAAEQTLKLIEVNYRAGLVSYLDVLAANTQFYQSKIAYLQALGLRY--QDTTALFVALG 477 Query: 448 SGY 450 G+ Sbjct: 478 GGW 480 >gi|299770129|ref|YP_003732155.1| Outer membrane protein [Acinetobacter sp. DR1] gi|298700217|gb|ADI90782.1| Outer membrane protein [Acinetobacter sp. DR1] Length = 466 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 105/457 (22%), Positives = 207/457 (45%), Gaps = 21/457 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + S V L C V + +P + +P F+ +S I + K E +D L +++ Sbjct: 12 VVSALSVALVAC-VNMQAPQPTAISHIPQNFAQNSSGTTIAEKSYK--EFISDPKLLQVI 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPN--LKTNST 117 +I L N + AT I ++ + P+ + +S PN + T Sbjct: 69 EIGLNNNRDLRTATLNIERVQQQYQITKNSQLPTIGITGNAVRQVSPSINPNNPVSTFQV 128 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G + +++D +G+ +++ +++L N + + + ++ +IS + +++ + +++ Sbjct: 129 GLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQIGLISNITQVWLNYAFAQANLNL 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q L L+ +F G S++ L + + +++ +D+ T + + + L Sbjct: 189 AEQTLKAQVDAYNLNKKRFDVGIDSEVPLKQAQISVETARNDVATYKTQILQAKNLLDLL 248 Query: 237 LGYPATEFLHYMQKQSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 G P E L N + N G+P+DL+ +RPDI+ E L + A IG A Sbjct: 249 AGSPIPENLLPSDSIKNITLEKNFAA----GLPSDLLNHRPDIKAAEYGLRAAGANIGAA 304 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K+ ++P++SL GS + F N WS GP + LPIFD G K+ I+ AE + Sbjct: 305 KARMFPTISLTGSTGYASTELKDLFKSGNFAWSVGPSIDLPIFDWGTRKAGIKIAEIDQK 364 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++++ A KEV +AL + ++ + + V + LSM Y+ G S Sbjct: 365 VALSEYEKSIQTAFKEVNDALATHAHIEERLDAQRRLVSATSATYKLSMARYKAGVDSYF 424 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +R+ + L ++ + +++Y +G G Sbjct: 425 TVLDAQRSAYAAQQGLLALEQVKLNNQIEIYKVLGGG 461 >gi|153212720|ref|ZP_01948377.1| multidrug resistance protein, putative [Vibrio cholerae 1587] gi|124116370|gb|EAY35190.1| multidrug resistance protein, putative [Vibrio cholerae 1587] Length = 481 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 95/435 (21%), Positives = 211/435 (48%), Gaps = 29/435 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 ++ S F+ L GC+V P+ + + + + ++ + WW+ + D LN L+ Sbjct: 21 SLLSAFV--LTGCSVPPDLATMWEANELSSINTFSHQAEMDWPSANWWQRYQDAQLNHLI 78 Query: 66 KIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF---IPNLKTN 115 + ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ P N Sbjct: 79 EEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQSATPPDGWN 138 Query: 116 STGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y + Sbjct: 139 DYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAELARLYA 198 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 H L + K +EL ++ G + S+ + +A S+E+++ +++S ++ + Sbjct: 199 NQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQESIQLQKNA 258 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRYQEKKLADS 288 ++ L+G + ++ +P++ + G+P++ L+ +R DI + + Sbjct: 259 LAALVGQGP-------DRAASIEEPHITLTFRYGLPSEAGVGLLGHRADITAARWRAEAA 311 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F G+++ + Sbjct: 312 AQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLEGQLT 371 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ ++ Y+ Sbjct: 372 SAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQ 431 Query: 406 QGRYSLLDILDIERA 420 G + LD+L E + Sbjct: 432 GGLATYLDVLVAEES 446 >gi|78189165|ref|YP_379503.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium chlorochromatii CaD3] gi|78171364|gb|ABB28460.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium chlorochromatii CaD3] Length = 492 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 100/458 (21%), Positives = 211/458 (46%), Gaps = 34/458 (7%) Query: 15 LAGCTVGPEYTKPH--MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + GC+ E P MP + + + I + + F DT+L L++ L N Sbjct: 46 IVGCSAPKESMPPDVAMPDAYRGAATVAAPSDSTIAQMPYQNFFADTALTALIEQTLAHN 105 Query: 73 LTILQATERINAAKENILSVRADLFPS---SYASI----SHRFIPNLKTNSTGQLDSDWK 125 + A + I A++ + + + PS S +I S + T + + W+ Sbjct: 106 ADLQSALKNIELAEQTLDAAKVVWLPSLNLSAQTIRNESSEHGVRRTPKEFTAAVSASWE 165 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D++G+ + +S LAN + V K +++ + Y + E++++A + L L Sbjct: 166 VDVWGKIKNRKQSVLANYLKSQEAVKALKTRLVADVASGYYNLLMLDEQLAVARKNLALA 225 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY---PA 241 K + + L++ G + L++ + EA + + + IP +E++ + + +S L G Sbjct: 226 DKTLAMMQLQYQAGQFTHLAIRQQEAARQQLAATIPQIEQAVAVQENALSVLSGSMPNAI 285 Query: 242 TEFLHYMQ-KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 T +Q K +N F +GIPA ++ NRPD++ E L + A + + + Y Sbjct: 286 TRNPSLLQVKPTNTF--------AVGIPAAMLHNRPDVQAAEFALKAATADMKESGAAFY 337 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 PS ++ ++ S +N S + PIF +G+++ ++++ + + Sbjct: 338 PSFTITAQKGVSALQSSDWFNVPSSLFSVVQGTMLQPIFQRGQLEVTYKQSQVKRDQAAL 397 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE----LHKKSMSLSMINYRQGRYSLL 412 ++++V+ A+ EV +AL I +K+ T+ Q A E L + + M+ +R G + + Sbjct: 398 AFRQSVVKAVAEVSDALVRI---EKLQTQEQLAEERVATLQQAVRNADML-FRSGLATYV 453 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ ++ E+ L+ +RQ + +LY A+G G+ Sbjct: 454 EVMSVQSNAHNAELTLADLRRQRLTATAELYRALGGGW 491 >gi|315606297|ref|ZP_07881313.1| FusA/NodT family multidrug resistance protein [Prevotella buccae ATCC 33574] gi|315251988|gb|EFU31961.1| FusA/NodT family multidrug resistance protein [Prevotella buccae ATCC 33574] Length = 462 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 110/424 (25%), Positives = 193/424 (45%), Gaps = 45/424 (10%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L W F D L L++ AL N +L A +N A+ + + + PS + I Sbjct: 58 LPWRSVFTDPRLQTLIEKALANNTDLLNAALNVNMAESQLKAAKLAFVPS-FTFSPQGTI 116 Query: 110 PNLKTNSTGQ-----LDSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 + N + + + W IDLFG Q+R S +A + + Q+ + K +++ + Sbjct: 117 ASWDGNKPTKTYSLPISASWSIDLFGNLLSQKRS--SQMALIATKDYQL-VVKTKIVTGV 173 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y +++ I + +L K +L ++ G + EA S+++ Sbjct: 174 ANMYYTLLMLDKQLEIVTDMEELTKNTWDLMKIQKELGRVRSTGVQSAEANYYSVQAQKV 233 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINI--GIPADLIRNRPD 277 L++ R +++S LL PA +++QS +P N+ G+ ++ NRPD Sbjct: 234 DLQRQIRETENSLSLLLAQPAQAVGRGKLEEQS--------LPSNLAAGVGIHMLNNRPD 285 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THW--SFGPKLYLPI 334 + Y E LA + A+S YPSL+++ + T+ + N W S L PI Sbjct: 286 VHYAEMSLAQCFYNVETARSRFYPSLTISPTGTFTNSSGMGVVNPGKWLLSAVGSLVQPI 345 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKI----VTKLQ 387 F G+I + ++ A++ ++ Y TWQ+++L+A EV NAL S NE +I V L+ Sbjct: 346 FQHGQIVAGLKVAKAKYEQAYNTWQQSILSAGSEVSNALVLYNSSNEKSQIEAKQVATLK 405 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIA 445 VE K+ M+ S Y L+++ +++ E LS + AK + V+LY A Sbjct: 406 QNVEDTKRLMAESNSTY-------LEVITAQQSLLNAE--LSKVRDDFAKMQAVVNLYYA 456 Query: 446 IGSG 449 +G G Sbjct: 457 LGGG 460 >gi|308270699|emb|CBX27309.1| Outer membrane protein oprM [uncultured Desulfobacterium sp.] Length = 508 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 110/469 (23%), Positives = 201/469 (42%), Gaps = 45/469 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-------NIDTLKWWESFNDTSLNKL 64 ++ + GC++ P+YTKP P+ P ++ G + L L W F D L ++ Sbjct: 52 LLFMGGCSMNPKYTKPLAPV-PAEWPKGEAYKLTQAAPETPTAPELSWKAFFTDPKLQQI 110 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTNST 117 ++ AL N + A + A+ RA+L P S I+ I + ++ Sbjct: 111 IETALTNNRDLRIAALNVERARALYGVQRAELLPVVNAAGTGSKERIAANLISPEGSRTS 170 Query: 118 GQLD-----SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 Q + + W++D FG+ R + E LA D A V +A ++ ++++ Y+ Sbjct: 171 EQYNVGLGIAAWEMDFFGRIRSLKDQALEEYLAT-DEARRSVQVALVSEVARV---YLTL 226 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E + +A L + +L ++ G SKL L + + + S D+ + Sbjct: 227 SADLENLKLARSTLTAQQSAYDLIKRQYEVGVVSKLDLRQAQIPVDSARGDVARFTQIAA 286 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKL 285 + + + L G + + + P P I G+ ++ + NRPDI E +L Sbjct: 287 QDRNALDLLAGSKVP--MDLLPSDLARYNP----PKEIFAGLSSESLLNRPDIMAAEHRL 340 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P +SL S+ D+ F + WSF P + +P+FD + + Sbjct: 341 KGAYAYIGAARASFFPRISLTTSVGTASDDLSGLFGSGSGTWSFTPHIVVPVFD-ARTWA 399 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R +++ + +++ + A +EV ++L + V Q + LS I Sbjct: 400 AYRVSQAQQEIALAQYEKAIQVAFREVADSLAVQGTVDQQVAAQQSLTNAVADTYRLSNI 459 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 Y +G S L +LD +R+ + L QLAK + V LY +G G Sbjct: 460 RYSKGIDSYLGVLDAQRSLYAAQQGL--ISLQLAKLANQVRLYAVLGGG 506 >gi|331652337|ref|ZP_08353356.1| putative outer membrane channel protein [Escherichia coli M718] gi|331050615|gb|EGI22673.1| putative outer membrane channel protein [Escherichia coli M718] Length = 457 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 216/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|78063193|ref|YP_373101.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77971078|gb|ABB12457.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 478 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 97/416 (23%), Positives = 196/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F D L++L+ L NL + A ER+ A+ + RA L P +++A+ + + P Sbjct: 57 FRDPVLDRLIATVLNDNLDLQAAAERVKQAQALTVQKRAVLLPELDATAHAADARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGAG-LALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVD 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + +EL+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQDNAKIRQHALELTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQV 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P + P + P+ + RPD+ ++ Sbjct: 236 SHQLNLIAVYSGRTPESVDRLVLAQAGEIPAPPVGSPGTL--PSQALLRRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLTDGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADITQSESRMRESELGLRQTMLQALREVEDARANLVSSDEASRRLGSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ KR+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDSDSLNQVKREHALAAVALYRSLGGGWS 462 >gi|221201767|ref|ZP_03574804.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221207728|ref|ZP_03580736.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221172574|gb|EEE05013.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221178187|gb|EEE10597.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 552 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 108/466 (23%), Positives = 207/466 (44%), Gaps = 39/466 (8%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 52 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYDDPQLNALIDKLNA 109 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTN------------- 115 N TI Q+ A+ + RA FP+ AS S P + Sbjct: 110 SNQTIAQSAAAYRQARALVSEARAAYFPTVGLSASGSRARTPRSSFSSGTSSSFGSSTSG 169 Query: 116 ------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 S G LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 170 SISNSYSVG-LDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTYFQLR 228 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Y+++++L+ ++ QG ++ +++ + +++S ++ + Sbjct: 229 TSDALQKLLDETVQSYRQSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGVARAQ 288 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+TL+G PA+ F + +P + P+++ P+ L+ RPDI E++ A + Sbjct: 289 YEHAIATLIGEPASTF--SLPPMPLAAEPPV-TPVDV--PSTLLERRPDIAAAERRAAAA 343 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+A S +P+L+L+ S F W+ GP+L +FD G + + Sbjct: 344 NEQIGVAISAFFPTLTLSASGGFESSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTQ 403 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + ++ VL+A ++VE+ L S + + + AVE + ++++ Y+ Sbjct: 404 AARATYDQDVAAYRLAVLSAFQDVEDNLASQRILAQEIDVQRQAVESAEHALAIVTNQYK 463 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++L + L+ Q S V L A+G G+N Sbjct: 464 AGTVAYLNVLTAQTTAFTARQKLATITGQRMVSSVALVKALGGGWN 509 >gi|167820983|ref|ZP_02452663.1| outer membrane lipoprotein [Burkholderia pseudomallei 91] Length = 455 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 96/435 (22%), Positives = 195/435 (44%), Gaps = 30/435 (6%) Query: 34 TQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 T+F+ ++ + D WW F ++ V A + T+ +A + ++ ++ Sbjct: 17 TRFAASDATQTLAPDAPFPDAWWRLFGSREIDAAVDDAFAGSPTLARARATLARSEHALI 76 Query: 91 SVRADLFPSSYASIS---HRFIP------------NLKTNSTGQLDSDWKIDLFG-QRRH 134 + +P + A R++P NL T ST + +DL+G +RRH Sbjct: 77 TGAGVFYPQADAQAGASRQRYVPLRTGANLPASLFNLFTLST---TVSYALDLWGGERRH 133 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 +E A D+ + A+L + + ++ + I + + I++ +++ L + I L+ + Sbjct: 134 VEGLAAQADAQRHALAAARLTLAANVVNTMIARAAYADEIALTRELIALTDEQIRLTRAQ 193 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSN 253 + G ++ +++ L+A S+++ +P LE+ ++TL G YPA ++ Q + Sbjct: 194 VSAGTSAYTAVLALQAARASLDASLPALEQKTGEADDLLATLAGRYPA----EHVPPQVS 249 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 L + +P++L+R RPDI E L + A IG+A + L+PS++L+ S Sbjct: 250 LAAIALPARLPRTVPSELVRRRPDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDA 309 Query: 314 DNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 + F WS G + P+F G + + A + E +++TVL+A +V Sbjct: 310 TRASALFGPAGRAWSVGASITAPLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVA 369 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 + L +++ D + A+ + + L+ + Y G L +L ++ + + Sbjct: 370 DTLRALDHDATALDAQARAMSAARDARRLATVQYEAGTAGYLQVLLADQQYRQARLAWVQ 429 Query: 431 AKRQLAKSYVDLYIA 445 A Q + V LY A Sbjct: 430 ASAQRLQDTVALYAA 444 >gi|121727546|ref|ZP_01680658.1| multidrug resistance protein, putative [Vibrio cholerae V52] gi|147673563|ref|YP_001216966.1| putative multidrug resistance protein [Vibrio cholerae O395] gi|262169294|ref|ZP_06036986.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae RC27] gi|121630130|gb|EAX62533.1| multidrug resistance protein, putative [Vibrio cholerae V52] gi|146315446|gb|ABQ19985.1| putative multidrug resistance protein [Vibrio cholerae O395] gi|227013324|gb|ACP09534.1| putative multidrug resistance protein [Vibrio cholerae O395] gi|262022107|gb|EEY40816.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae RC27] Length = 484 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 100/443 (22%), Positives = 216/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ ++ WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSVNWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ E+ + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|329850818|ref|ZP_08265663.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Asticcacaulis biprosthecum C19] gi|328841133|gb|EGF90704.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Asticcacaulis biprosthecum C19] Length = 463 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 212/476 (44%), Gaps = 50/476 (10%) Query: 2 NILRAIFSLFIVLLAGC----TVGPEYTKPHM-PLLPTQFSIGNSKNLINIDTLKWWESF 56 ++LR +F + +V GC TV P + P + L T +++ + + D WW F Sbjct: 3 HLLRPVFFVALVAAGGCANHPTVAPSTSVPAVGAFLETGYAVSTAP--VPGD---WWRLF 57 Query: 57 NDTSLNKLVKIAL---------QQNLTILQATERINAAKENILSV--------RADLFPS 99 +D LN+ V+ AL + NL +A R A I +V +A+ PS Sbjct: 58 DDPVLNRHVERALAANTDIRAARANLETARAITRQAEAARGIATVAESGAGPNKANTQPS 117 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 + + +P KT+ +++DLFG+ + ++ A+ ++A A ++ A++ V++ Sbjct: 118 TSS------VP--KTSYEAGFTVAYEVDLFGRFSAVTRAAEADANAAQATLEAARVTVVA 169 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+D + +D + +L + G S L L + A +++ + Sbjct: 170 DTVSAYVDLCAAARDQDLLQAQVDTAAQARQLIASQLLLGEVSPLQLARATAALETTRAG 229 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P+L+ R ++ ++ L G P E P + + G A L+ RPD+ Sbjct: 230 LPSLQAERRRALYTLAALQGLPPAEAAGL--DSDCRTLPRIISVLPAGDGAGLLARRPDV 287 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIF 335 R E+KLA + A+ I +DLYP + L G+ A F + T W+F Sbjct: 288 REAEQKLAAAAARTDITTADLYPRIRL-GASAGEIGGGFDVFMTPLITWNFP-------- 338 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ ++ I A +A + +L A++E E L + D LQ A K Sbjct: 339 NQNVERAKIAAATGTANAALARFDGVMLGALRETETVLAAYQADLSREASLQAAFAESDK 398 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + YR G S L +LD + A E DL+ ++ ++A+S + L+ A+G G+ Sbjct: 399 AFTRAQSRYRLGEDSYLWVLDAQTARNIAERDLATSEVRIARSQIALFKALGGGWQ 454 >gi|322835502|ref|YP_004215528.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321170703|gb|ADW76401.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 457 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 109/459 (23%), Positives = 202/459 (44%), Gaps = 21/459 (4%) Query: 7 IFSLFIV----LLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 IF L I+ LLAGC ++ P+Y +P P+ P + ++ W D L Sbjct: 2 IFRLSIISLAMLLAGCISLDPDYQRPAAPV-PAVWPAQGAQPAATTVLSDWQGIMADARL 60 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNSTGQ 119 N +V AL N + +A I AAK RA LFP+ A +S + +S+ Sbjct: 61 NAVVAKALTSNRDLQEAIADIEAAKALYGEQRASLFPTLDAELSQTRSRTQDAGVSSSAT 120 Query: 120 LD---SDWKIDLFGQRRHIESSLANLDSAYAQVDIA---KLNVISKLIPSYIDARHFKER 173 D S ++IDLFG+ R + S A ++ A A +L +IS+ ++I Sbjct: 121 ADGAVSSFEIDLFGRNRSL--STAAKETWLASESTAQNTRLTLISETSTAWITLAADNSN 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A L ++ ++ + +G S + A + + + + + +++ + Sbjct: 179 LKLAQDTLKSAADSLSITQRRQQEGVASGPDVSSSMAIYQQARASVASYQTLVAQDINAL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L G + L + + P + GI + ++ RPD++ E L + A IG Sbjct: 239 NLLAGDTVAQNL--LPGTLESLAPQAIKLVPAGISSSVLLRRPDVQEAEHNLKSANADIG 296 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A+++ +P+LSL S + N F + WSF P L LP+F G + +R AE+ Sbjct: 297 AARANFFPTLSLTASAGVGSSSLSNLFSHGSNVWSFAPSLSLPLFTGGSNTAQLRYAEAE 356 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ + +A K+V +AL + + Q V ++S L+ +Y G Sbjct: 357 KKGLIAAYEKAIQSAFKDVADALARRATLSEQMDAQQQYVAAAQRSYDLARRSYETGAGD 416 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R+ + DL ++ ++ + L+ +G G Sbjct: 417 YLTVLTDQRSLWSAQTDLIALQQTDFENRITLWQTLGGG 455 >gi|118577432|ref|YP_899671.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118577449|ref|YP_899688.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118580332|ref|YP_901582.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gi|118503042|gb|ABK99524.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] gi|118504937|gb|ABL01418.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] gi|118504954|gb|ABL01435.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 495 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 117/482 (24%), Positives = 212/482 (43%), Gaps = 50/482 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLIN---ID 48 + L LAGC GP++ +P P + PTQF G ++ L+ I+ Sbjct: 23 VAGLVTAGLAGCAAGPDFQRPTAPDVARYTATPVADRTASAPTQF--GETQRLVEGLPIE 80 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSV 92 T +WW+S ++L+ L+ A + T+ + + A+E + S Sbjct: 81 T-QWWQSLGSSALDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQ 139 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDI 151 R + PSS +L S G + +DL G RR +E+ A D +++ Sbjct: 140 RQQMSPSSQGLSGDARQFSLYNASVG---VHYNLDLAGGNRRALEALAARADYRRFELNA 196 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + + I ++ IL + + + L+H + G S + L+A+ Sbjct: 197 ARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQ 256 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +++P L K + H ++ L G P T + +F L + + + +P++ Sbjct: 257 AEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTL--ADF--TLPVEMPLVVPSE 312 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI+ E L + A G+A + LYP ++L+ GS ALT F G + W Sbjct: 313 LVRRRPDIQASEALLHAANADYGVAIAKLYPQINLSANLGSQALTTGALFGGGSAVWGLV 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL +++ V + L ++ D + +T L Sbjct: 373 AQLTQPLFNPG-LPAEKRAALAAFDAAAANYQSVVLESLRNVADTLRAVESDAQTLTALA 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + S+ YR G S L +L ++ + +++ A+ Q V LY A+G Sbjct: 432 AADMAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAAQAQRLVDSVALYQALG 491 Query: 448 SG 449 G Sbjct: 492 GG 493 >gi|322433031|ref|YP_004210280.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] gi|321165258|gb|ADW70962.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX9] Length = 523 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 112/499 (22%), Positives = 217/499 (43%), Gaps = 71/499 (14%) Query: 12 IVLLAGCTVGPEYTKP-------HMPLLPTQFSIGNSKNLINI----DTL---KWWESFN 57 +++L+GC VGP Y P + PT +S G + + D + KWWE F Sbjct: 14 VMVLSGCRVGPRYVAPAPPAPPAYKESAPTAYS-GATDAVWQPAQPQDAMLKGKWWEIFR 72 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLK- 113 + LN L N I + AA+ + +A +P+ + A + L+ Sbjct: 73 EPELNGLEDTLNIDNQNIALYFQNFMAARSQVKQAKASYYPTVGVAPAYTREKSPSTLRG 132 Query: 114 -------------------------------TNSTGQLDSDWKIDLFGQRRHI--ESSLA 140 T+ + D W+ DL+G+ R+ E A Sbjct: 133 VGVSSGTTTGTGTTGTTGTTGTSTTSTGGTYTDLSLPFDVSWEPDLWGKIRNTVREYQYA 192 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 SA A ++ +L + L Y + R + +D +K+++L+ + G Sbjct: 193 TQVSA-ADLENERLTEQADLAEYYFELRGQDALQQVYDATIDADRKSLDLTKVLVETGID 251 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S ++ + E +K+ E + ++ + H I+TL+G PA+ F ++ + Sbjct: 252 SPEAVAQAEVTLKNAEEAGAGVAQNRAIYEHAIATLIGKPASSFSLPVRAATPAA----- 306 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----- 315 I +G+P+ L++ RPDI E+ +A++ A IG+ K+ YP+LSL G+ L + Sbjct: 307 PAIPVGVPSQLLQRRPDIAAAERTMAEANALIGVEKAAYYPTLSLTGTGGLESSHISSLF 366 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 S P + W+ G IFD G K+ + + + +++ETVL A ++VE+ + + Sbjct: 367 SVPAF--FWTLGASASETIFDAGLRKATVAQYTAQFNADVASYKETVLTAFQQVEDYIAT 424 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAK 432 + + + K Q A++ ++ + ++ Y+ G L+++ + + + +V L +++ Sbjct: 425 LRVTSQQIAKQQEAIDAAQRYVDIATARYQTGLDPYLNVISAQTTLLSDQQTQVTLKVSE 484 Query: 433 RQLAKSYVDLYIAIGSGYN 451 A V L A+G G++ Sbjct: 485 MTAA---VQLIQALGGGWD 500 >gi|296135591|ref|YP_003642833.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] gi|295795713|gb|ADG30503.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] Length = 526 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 110/473 (23%), Positives = 205/473 (43%), Gaps = 42/473 (8%) Query: 15 LAGCTVGPEYTKPHMP-------------LLPTQFSIGNSKNLINIDTLK--WWESFNDT 59 L GC GP++ P P T +G ++ I + WW++F Sbjct: 34 LVGCAAGPDFKTPPAPQAMSYTTGKPPARTASTPGELGGAQQFIAGQPVAAMWWKAFASP 93 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPSSYASISHRFIPNLKTNST 117 L+ LV +LQ + T+ A + A+E I + ++ +P A++ + + N + + Sbjct: 94 KLDALVVQSLQHSPTLAAAQSTLRQARE-IYAAQSGSTRYPQVSATLGAQTLQN-NSAAM 151 Query: 118 GQLDSDWKIDLF--------------GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 G + + DL+ G RR +E+ A + Q+D A+L++ ++ + Sbjct: 152 GLPGGERRYDLYNAGVGVSYAFDLSGGNRRALEALAAQTEWRRYQLDSAQLSLAGAVVAT 211 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + +I ++L ++ +E++ + G + + L+ +++ + I L Sbjct: 212 AVKQALLAAQIDALQKMLAAQQEQLEITRARERLGVATASDIATLQTQMEQTRASIAPLR 271 Query: 224 KSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 S H ++ L G P T + ++F NL + + +P++L+R RPDI E Sbjct: 272 NSADQAAHLLAVLSGQEPGTA--KNPRFTLDDF--NLPADLPLSLPSELVRQRPDILAAE 327 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A+IG+ S YP L+L+ GS ALT + F + W +L P+F G Sbjct: 328 ALLHVASAQIGVTVSKQYPQLTLSANLGSQALTAASLFGSGSLIWGVAGQLAQPLFKPG- 386 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +K+ R AE+ ++ETVL +++V + L S+ D + + A + S+ L Sbjct: 387 LKAEARAAEAGFDAAAANYRETVLQGLRQVADVLRSLEHDAQALQAQSAAEASAQTSLQL 446 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y G S L +L ++ + + L A+ LY A+G G P Sbjct: 447 VEQQYALGTASALQLLTAQQQRQQTRIGLIAAQAARLNDTALLYQALGGGLQP 499 >gi|320653512|gb|EFX21617.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 457 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQTRASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|325521094|gb|EGD00012.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 452 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 94/425 (22%), Positives = 196/425 (46%), Gaps = 31/425 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISH 106 T WW F +++ V AL + T+ A + ++ + + + FP + A S Sbjct: 34 TRDWWTRFGSRAIDSTVAEALTGSPTLDLAEATLRRSEHALRAGQGIFFPQVDAQAGASR 93 Query: 107 RFIPNLKTNS----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 + L+T T + +DL+G ++R +E+ A++D+ + A L Sbjct: 94 QRAWPLRTGQALPASIFNLFTLSATVSYTLDLWGGEQRQVEALAADVDAQRQALAGAYLM 153 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + ++ + + +++ + +++ L + I L+ + T GA + ++++ LE++ S+ Sbjct: 154 LTANVVNTMVARAAYRDEAAATREMIGLLDEQIRLTGAQVTAGAAAYVAVLTLESQRASL 213 Query: 216 ESDIPTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL 271 E+ +P L++ R ++ LL YP + + + +P ++ P+ L Sbjct: 214 EAALPALDQK-RAQADDLLALLAGRYPVD------WRTPDLSLDGIELPASLPDTAPSSL 266 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGP 328 +R RPDI E +L + A++G+A + LYP+L+L+ S + F WS G Sbjct: 267 VRRRPDILQAEAQLHVASAQVGVATAALYPNLTLSASGGFDSVVASKLFAPAGRAWSVGA 326 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF G + + R A+ + E ++ VL+A +V + L ++ D + Sbjct: 327 GLTAPIFHGGTLLNRRRAAQDAYDEADAAYRRVVLSAFSQVADTLRALANDAMALDAQAR 386 Query: 389 AVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A+ + ++ L+ Y G Y L + D++ A++ ++A+R + V Y+A+ Sbjct: 387 AMAAARDALKLTQAGYDAGIAGYVQLLVADLQYHQARIAWLQTVAQRL--QDTVAFYVAL 444 Query: 447 GSGYN 451 G G+ Sbjct: 445 GGGWG 449 >gi|300313892|ref|YP_003777984.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300076677|gb|ADJ66076.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 497 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 104/465 (22%), Positives = 198/465 (42%), Gaps = 36/465 (7%) Query: 17 GCT-VGPEYTKPHMPL----------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 GC + P+YT+P P+ P S G + I+ D L W E F D L +++ Sbjct: 27 GCANLAPDYTQPAAPVPASWTSQAAAQPAVGSAGPAAGEIDADHLGWREFFLDPRLQQVI 86 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNLKTNSTGQLD- 121 AL N + A I A+ A+ +PS A S + R L T + + Sbjct: 87 AAALDNNRDLRVAALNIEKARAQYRITDANRYPSISATGTSSASRTPAELSTTGSAAVSH 146 Query: 122 --------SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHF 170 S +++D FG+ +++ S A L+S QV+ + +++++++ +++ Sbjct: 147 QQSVTVGVSAYELDFFGRLKNL--SDAALESYQYQVETRRSTHISLVAEVATAWLTLASD 204 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ + +A + LS G S + L EA ++S +D+ ++ Sbjct: 205 RDLLKLAQDTYASQSRTFALSQRSHDIGTVSGVDLASQEATVESARADVARYASQVEQDL 264 Query: 231 HNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G L + + P G+P+ ++ RPD+ E L + Sbjct: 265 NALRLLVGADIDAALLPAGLPDTASVLPA----TPAGLPSQVLLRRPDVLAAEHTLKSAN 320 Query: 290 AKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A IG A++ +PS+SL G+ + T F + W+F P + LPIF+ G +++++ Sbjct: 321 ADIGAARAAFFPSISLTANGGTASRTLGGLFKAGSGSWTFSPSINLPIFNAGSLRASLDS 380 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ + +++ + A +EV +AL + + A +K+ LS YR Sbjct: 381 AKITRDIDVANYEKAIQTAFREVADALAVRATLDQRLDAQGKATAASEKAFRLSDARYRN 440 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L L +R + L + + + LY +G G++ Sbjct: 441 GVDSYLTTLVAQRTLYSAQQTLISLRLTEQSNRITLYKVLGGGWS 485 >gi|270294696|ref|ZP_06200897.1| multidrug efflux pump channel protein [Bacteroides sp. D20] gi|270273943|gb|EFA19804.1| multidrug efflux pump channel protein [Bacteroides sp. D20] Length = 466 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 103/431 (23%), Positives = 196/431 (45%), Gaps = 31/431 (7%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 S+ + + +I +L W E F D L L++ ALQ N +L A +RI A+ ++S + Sbjct: 48 LSLFAASDTTSIASLSWRELFTDPQLQSLIEQALQGNTDLLSAQQRIKEAEATLMSAKLS 107 Query: 96 LFPS----SYASISHRFIPNLKTNST--GQLDSDWKIDLFG-----QRRHIESSLANLDS 144 PS +S N K + T G + W++D+FG +RR L +L+ Sbjct: 108 YLPSFMLTPQGGVSS--FDNSKGSWTYSGIASASWEVDIFGKLTNAKRRSKALYLQSLE- 164 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 Y Q ++I+ + Y E+ I+ + +++++ G T++ S Sbjct: 165 -YEQA--VSTSLIANVANLYYTLLMLDEQYRISEETAASWRESVRTMRAMMAAGMTNEAS 221 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPI 263 + + EA + +E+ + L + + +++S LLG P T + + F L Sbjct: 222 VSQSEANCRQVEASLLDLRQQVKEVENSLSILLGDVPGT--IERGRLAGQEFPQEL---- 275 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PG 319 +G+P L+ RPD++ E LA + A+S YPS++L+G+ T+ PG Sbjct: 276 AVGVPLQLLSRRPDVKSAELSLASAFYSTNAARSAFYPSITLSGTAGWTNSAGSMIVNPG 335 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + G L P+F+KG + ++ A++ +E + +Q+ +LNA EV NALT + Sbjct: 336 KLLFSAIG-SLTQPLFNKGLNVAQLKIAKAQQEEARLAFQQALLNAGSEVNNALTQVQVA 394 Query: 380 K-KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + K + + L S ++ + G + L++L ++ ++ + + Sbjct: 395 RGKTELRARQITSLETTVRSTRLL-MQHGTSTYLEVLTAQQGLLSAQLTQVADRFDEIQG 453 Query: 439 YVDLYIAIGSG 449 ++LY A+G G Sbjct: 454 IINLYQALGGG 464 >gi|296444431|ref|ZP_06886396.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] gi|296258078|gb|EFH05140.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] Length = 516 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 109/473 (23%), Positives = 221/473 (46%), Gaps = 54/473 (11%) Query: 20 VGPEYTKPHMP------LLP-----TQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVK 66 VGP++ P P +P T + G S+ L++ + +WW+ F SL LV+ Sbjct: 17 VGPDFASPPAPGAAGYGAIPSKTQSTPTAGGASQTLVHGRDIPGEWWKLFRSRSLTALVE 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-PNLKTNSTGQLDS--- 122 A+ + I A + A+E I + R FPS A+++ F + T+ G L Sbjct: 77 EAVANHPNIAAAEAALRQARETIEADRGSFFPS--ATLNQSFTRSQMSTSQYGGLGGSSN 134 Query: 123 --------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + D+FG+ +R +ES A + Q++ L + + ++ + + Sbjct: 135 SLLLYSLHNSNVAVSFTPDVFGKTQRTVESDEAAAEYQRFQLEATYLALTANVVTAAVSD 194 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + +I + +++ Y++ + L +F GA S+ ++ + E+ +P LEK+ R Sbjct: 195 GSYAAQIKVTRELIAAYREQLRLLEKRFELGAVSQADVLSERTLLAQAEATLPPLEKA-R 253 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKL 285 N+ L+ Y F + ++ + NL +P + + +P+ L+R RPD+ E +L Sbjct: 254 AQTRNL--LMAYLG-RFPNGDNGEAVDIA-NLKLPRELPVSLPSTLVRQRPDVLSAESQL 309 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIK 341 + A++G+A +++ P +L+ + T +N F T ++ + FD G + Sbjct: 310 HQASAQVGVATANMLPQFTLSATGGTTGNN-FAKLMTPTSMVYTLAEQASAQAFDAGTL- 367 Query: 342 SNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + R A+ +A EQ ++ TV++A++ V ++L +++ D + A + KS+ ++ Sbjct: 368 FHRREAKVAALEQSAAQYRATVISAVQNVADSLQAVSHDAATLRAQVAAEKAAAKSLEIA 427 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 I Y G + +LD E++ + L+ K Q A+ + D L+ ++G G+ Sbjct: 428 RIQYSVGATNYSIVLDAEQSL--LNTRLARVKAQAAR-FADTAALFQSLGGGW 477 >gi|15831119|ref|NP_309892.1| outer membrane channel protein [Escherichia coli O157:H7 str. Sakai] gi|168749074|ref|ZP_02774096.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4113] gi|168755968|ref|ZP_02780975.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4401] gi|168762700|ref|ZP_02787707.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4501] gi|168769369|ref|ZP_02794376.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4486] gi|168775112|ref|ZP_02800119.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4196] gi|168784047|ref|ZP_02809054.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4076] gi|168788388|ref|ZP_02813395.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC869] gi|168799598|ref|ZP_02824605.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC508] gi|195939712|ref|ZP_03085094.1| putative outer membrane channel protein [Escherichia coli O157:H7 str. EC4024] gi|208810842|ref|ZP_03252675.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4206] gi|208815797|ref|ZP_03256976.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4045] gi|208818238|ref|ZP_03258558.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4042] gi|209396466|ref|YP_002270348.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4115] gi|217329297|ref|ZP_03445377.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. TW14588] gi|254792883|ref|YP_003077720.1| outer membrane channel protein [Escherichia coli O157:H7 str. TW14359] gi|261224279|ref|ZP_05938560.1| outer membrane channel protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257465|ref|ZP_05949998.1| outer membrane channel protein [Escherichia coli O157:H7 str. FRIK966] gi|291282383|ref|YP_003499201.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O55:H7 str. CB9615] gi|13361330|dbj|BAB35288.1| putative outer membrane channel protein [Escherichia coli O157:H7 str. Sakai] gi|187769344|gb|EDU33188.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4196] gi|188016559|gb|EDU54681.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4113] gi|188998721|gb|EDU67707.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4076] gi|189356759|gb|EDU75178.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4401] gi|189361575|gb|EDU79994.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4486] gi|189367073|gb|EDU85489.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4501] gi|189371880|gb|EDU90296.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC869] gi|189377961|gb|EDU96377.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC508] gi|208724348|gb|EDZ74056.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4206] gi|208732445|gb|EDZ81133.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4045] gi|208738361|gb|EDZ86043.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4042] gi|209157866|gb|ACI35299.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. EC4115] gi|217317736|gb|EEC26164.1| multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. TW14588] gi|254592283|gb|ACT71644.1| outer membrane channel protein [Escherichia coli O157:H7 str. TW14359] gi|290762256|gb|ADD56217.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O55:H7 str. CB9615] gi|320189953|gb|EFW64605.1| RND efflux system, outer membrane lipoprotein CmeC [Escherichia coli O157:H7 str. EC1212] gi|320642558|gb|EFX11806.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O157:H- str. 493-89] gi|320647911|gb|EFX16619.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O157:H- str. H 2687] gi|320659212|gb|EFX26801.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O55:H7 str. USDA 5905] gi|326341044|gb|EGD64837.1| RND efflux system, outer membrane lipoprotein CmeC [Escherichia coli O157:H7 str. 1125] gi|326343284|gb|EGD67051.1| RND efflux system, outer membrane lipoprotein CmeC [Escherichia coli O157:H7 str. 1044] Length = 457 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|296446876|ref|ZP_06888813.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] gi|296255647|gb|EFH02737.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] Length = 529 Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 120/514 (23%), Positives = 225/514 (43%), Gaps = 73/514 (14%) Query: 1 MNILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-------KNLINIDTL-- 50 M +LR + V L+GC + P Y P + P F N + + D+ Sbjct: 1 MRLLRRFLLMTACVSLSGCDLAPAYIAPTVET-PANFKEANGGGSSAEKRRAHSGDSGLQ 59 Query: 51 -------------KWWESFNDTSLNKLVKIALQQNLTILQA------------------T 79 WW +F D L+ L + Q N + QA T Sbjct: 60 WSSADPSDLHPRGSWWGAFRDKRLDALERDLDQFNPDLGQAMAVMDRARALAAKAAVGLT 119 Query: 80 ERINAAK---ENILSVR-----ADLFPSS----YASISHRFIPNLKT---NSTGQLDSDW 124 + A+ EN S+ A+ +PSS +++SH N T ++ + S + Sbjct: 120 PTLTASGQLTENKESLHRPLRLANSYPSSSDFARSALSHGLPTNAPTYYGDNQLSMQSSY 179 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDIAK--LNVISKLIPSYIDARHFKERISIAHQILD 182 +IDL+G+ R++ ++ + ++ D+A L++ ++L YI+ + I++ +I+ Sbjct: 180 EIDLWGRIRNLAAAGVAQ-AQASEADLAAIALSLHAELARDYINLQGADNEIALQKRIVS 238 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y +++ L + G TS + + + +I ++ + +E + H ++ L G+ Sbjct: 239 AYGRSLALVQKRVGGGITSPADVTRAQTQIGFAKAQLSEIEARRALLEHAVAILAGH-MP 297 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 E Q+ P IP++ P+ L+ RPDI E+++ + IG+A++ +P Sbjct: 298 ESFSLPSSQTRVAAPT--IPLDA--PSQLLERRPDIAAVERRVYGANLSIGVARAAFFPR 353 Query: 303 LSLN--GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++N G T + F N+ WS GP + LPIFD G +++ AES+ E ++ Sbjct: 354 FTINLSGGTQDTGLSLFNARNSLWSLGPAVTLPIFDGGAHSADLHDAESAYLEAVAHYRS 413 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER- 419 VL A EVE+AL I + + AV K++ +S+ Y +G + ++++ + Sbjct: 414 VVLRAYGEVEDALALIRYFDRQEKDIAAAVVAGNKTLDISLKLYEEGVVTYVEVVTAQSD 473 Query: 420 --ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 A + + L + Q A S L A+G G++ Sbjct: 474 AFAAQRQAIALRTGRLQAALS---LMTALGGGWS 504 >gi|254182389|ref|ZP_04888984.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|254187445|ref|ZP_04893958.1| outer membrane efflux protein [Burkholderia pseudomallei Pasteur 52237] gi|157935126|gb|EDO90796.1| outer membrane efflux protein [Burkholderia pseudomallei Pasteur 52237] gi|184212925|gb|EDU09968.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1655] Length = 460 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 189/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D +L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPTLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSKSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|148548082|ref|YP_001268184.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|166214979|sp|Q849R1|SEPC_PSEP1 RecName: Full=Probable efflux pump outer membrane protein sepC; Flags: Precursor gi|74484335|gb|ABA10820.1| outer membrane efflux pump component [Pseudomonas putida] gi|148512140|gb|ABQ79000.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] gi|298682347|gb|ADI95408.1| TtgG [Pseudomonas putida] Length = 480 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 104/478 (21%), Positives = 206/478 (43%), Gaps = 59/478 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 V L+GC++ P+Y +P P+ + G + D L W F D + + Sbjct: 12 VALSGCSLIPDYQRPPAPIQAGWPQGEAYAKLKAGTHRPSQTRDAELNWQVFFRDPVMRE 71 Query: 64 LVKIALQQNLTILQATERINA---------------AKENILSVR----ADLFPSSYASI 104 L+ AL N + Q + A A + + R ADL P+ A I Sbjct: 72 LIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQRLPADLSPTGEAGI 131 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIP 162 ++ L + +++D+FG+ R +E + L +A Q + ++ +I+ + Sbjct: 132 QSQYDTTLSMS--------YELDMFGRLRSLERAALQEYLAAAETQRSM-QIALIADVAI 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + ++ +A L Y+ ++ L G S L + + + +++ Sbjct: 183 AYLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVETARVQQTLY 242 Query: 223 EKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + +++ + LLG P ++ L QP ++ G+PADL+ +RP Sbjct: 243 TRQVAQDMNALQLLLGTKLPADLPISDVLD---------QP--LAALSTGLPADLLLHRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E +L + A IG A++ +PS++L G+ + D F G + W+F P++ LP Sbjct: 292 DIRAAEHRLLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLP 351 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G+++ N+ +++++ A +EV + L + + + + V+ + Sbjct: 352 IFTAGRLRGNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNN 411 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ Y +G + L +LD +R + + S V L+ A+G G++ Sbjct: 412 QAYYKLAYQRYDEGVDNYLAVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGGWD 469 >gi|325287247|ref|YP_004263037.1| RND efflux system, outer membrane lipoprotein, NodT family [Cellulophaga lytica DSM 7489] gi|324322701|gb|ADY30166.1| RND efflux system, outer membrane lipoprotein, NodT family [Cellulophaga lytica DSM 7489] Length = 472 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 213/464 (45%), Gaps = 25/464 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKL 64 A+ + L C V +Y +P +P + N + I++ + W F D L + Sbjct: 14 ALIVVVAFTLQSCFVAKDYDRPELPQTEALYRTDNLPTDSISMANVSWKNLFTDNYLEQY 73 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYA----SISHRFIPNLKTN 115 ++ LQ NL I A +++ AA+ +A FP+ +Y S + +F L Sbjct: 74 IQEGLQNNLDIRIAIQQLAAAEAYAKQGKAGYFPTLSIGPNYTHQELSKNSQFGSFLSNT 133 Query: 116 STGQLD----SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ST Q D W+ D++G+ R + ++ A + A K +IS + +Y + Sbjct: 134 STDQYDITANLSWEADIWGKIRSNKRATQAAYMQSVAGHQAVKTQLISSIANTYYNLLAL 193 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +++I + + + ++E G +++++ + A+ S ++ LE + Sbjct: 194 DAQLAITKETIKTRESSVETIKALKDAGNVTQVAVDQNIAQYNSAKALKVDLEAAIFRTE 253 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + +S LLG F ++ S + Q + + +G+PA L+ NRPD+ E L +S Sbjct: 254 NTLSILLGKAPQSF----KRSSLDIQK-IETDLALGVPATLLSNRPDVMAAEYGLINSFE 308 Query: 291 KIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +A+S YPSL+L G +L D + + L PIF++ K+K+ A Sbjct: 309 LTNVARSSFYPSLTLTASGGYQSLELDKLLDANSLFANIVGGLTQPIFNQRKLKTQKEVA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + ++ + +++T+L A EV NAL + N E +K +L+ VE +++ S + Sbjct: 369 LAQQEQSLLQFKKTLLTAGSEVSNALYTYNAETEKYEYRLKQ-VEALRRAEQNSEELLKN 427 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + LD+L + E+++ +K Q S V+LY A+G G+ Sbjct: 428 GYANYLDLLTARESALNAELNIIDSKLQQLTSIVNLYEALGGGW 471 >gi|229529520|ref|ZP_04418910.1| hypothetical protein VCG_002615 [Vibrio cholerae 12129(1)] gi|229333294|gb|EEN98780.1| hypothetical protein VCG_002615 [Vibrio cholerae 12129(1)] gi|327484075|gb|AEA78482.1| Outer membrane component of tripartite multidrug resistance system [Vibrio cholerae LMA3894-4] Length = 484 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 215/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFKG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|300309611|ref|YP_003773703.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] gi|300072396|gb|ADJ61795.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] Length = 493 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 89/394 (22%), Positives = 181/394 (45%), Gaps = 43/394 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTSLNKL 64 GC GP P MP P ++ + + + + WW+++ L+ Sbjct: 20 GCAFGPTGEAPAMPR-PDHYAAQATPADVGPEGARQRFVLGQRAVPQWWQAYGSPELSAW 78 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-----SHR----FIPNLKTN 115 V+ AL+ N ++ QA + +A+ L +RA + S + S+ + R +PN+ Sbjct: 79 VEEALRNNHSLAQAERNLASAR---LQLRAQIDQSLWPSVDAVGQAQRQRALGLPNIGPT 135 Query: 116 S------TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + GQ+ + + DLFG R+ ++ A +D+ Q D A+ +++ ++ S I+A Sbjct: 136 TNLYNVFAGQIRASYTFDLFGTERYANAATAAQVDAQSYQFDAARRALVANVVISAINAA 195 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++S +++ L + + + GA S+ L+ A +S+ + +P L+ + Sbjct: 196 ALRVQVSDTERLVALAEADASEVQRRAELGAASQDDLLAARANAQSLRASLPGLQAQWLA 255 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 H ++ L+G + + S L +P + + +P++L+R RPDI + L Sbjct: 256 ARHALAVLMGRTPDQAPADLDLAS------LRLPAEVPLAVPSELLRQRPDILAADAALK 309 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A+ A ++++PSLS++ S T + W G L P+F G ++S Sbjct: 310 VAAAQQAQATAEMFPSLSISASFGQSGFTWPKATGAAGAVWGLGASLTQPLFHGGALRSM 369 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 AE + +++TVLNA + V ++L +++ Sbjct: 370 SEAAEQAYLAAEANYRQTVLNAFQNVADSLVALS 403 >gi|162148222|ref|YP_001602683.1| efflux pump outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542864|ref|YP_002275093.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|161786799|emb|CAP56382.1| putative efflux pump outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530541|gb|ACI50478.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 505 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 114/482 (23%), Positives = 216/482 (44%), Gaps = 63/482 (13%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTL------------KWWESFN 57 +L GC+VGP++ P P T F+ ++ + + D + +WW F+ Sbjct: 28 VLGGCSVGPDFRHPAAP--STHFAQAGRPAHTDSTADADGMAQTFNPGQDIPGQWWTLFH 85 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-------- 108 +L++LV+ AL + T+ A+ + A+EN + LFPS AS + RF Sbjct: 86 SPALDRLVRHALDHSPTLEAASLALRVAQENRSAAVGALFPSISASFNPARFKTSRVYSP 145 Query: 109 IPN----LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 +PN L T T QL+ ++ D++G RR IESS A D+ Q++ A L + +++ + Sbjct: 146 VPNNNSWLYTVHTAQLNISYQPDIWGGIRRGIESSSAQRDALRYQLEAAYLTLTGEVVQA 205 Query: 164 YIDARHFKERI-------SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +I + +ILD + L L A + L + +A + Sbjct: 206 AVGYASLRAQIDAVKDLTAAQQRILDSSIRQQALGQLADADVAMQRAQLAQDQAML---- 261 Query: 217 SDIPTLEKSFRMNVHNISTLLG----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 +P ++ + + H I+ L G P +F + F +P++ +P LI Sbjct: 262 --VPLQQQLQQQHDH-IAALTGDMPDDPTPDFTL------DAFTLPQDLPVS--LPVRLI 310 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSF-PGYNTHWSFGP 328 RPDI+ E + A++G+A ++ P++ L+ G A T F PGY W Sbjct: 311 DQRPDIKVAEANWHAACAQVGVAVANRLPNIQLSAQPGVAAATIAQLFTPGYG-QWMLAG 369 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F G++ R A ++ +E ++ V+ A+++V ++L ++ D + + Sbjct: 370 MLSQPLFQGGQLLHEERAARAAYKESAAQYRAAVVTAVQDVTDSLNAVRADASALAANAN 429 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A + +S+ ++ G S + +L ++ + + L A+ L+ A+G Sbjct: 430 AEKAAARSLGITHARLGLGDVSQVALLTAQQTELQARLALVQARAARLSDTAGLFQALGG 489 Query: 449 GY 450 G+ Sbjct: 490 GW 491 >gi|107023055|ref|YP_621382.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116686704|ref|YP_839951.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105893244|gb|ABF76409.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116652419|gb|ABK13058.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 514 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 114/471 (24%), Positives = 206/471 (43%), Gaps = 41/471 (8%) Query: 12 IVLLAGCTVGPEYTKPHM---------PLLPT-QFSIGNSKNLINIDTLKWWESFNDTSL 61 + L C+ P Y+ P + P +P Q + WW F D L Sbjct: 19 VAALTACSTLPPYSPPAVAVPAHYAGAPAVPAAQAGWHVAMPADAAARGAWWTVFGDADL 78 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISH-RFIPNLK 113 N L N T+ +A + A+ + A P+ S A +S R +L Sbjct: 79 NALEARVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTITAGAAQSRARVSQNRLGSSLA 138 Query: 114 TNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 +T + + W+ DLFG+ R + + AN ++ A + KL+V ++L Y R Sbjct: 139 GKTTPDYQAGVAASWEPDLFGRVRDAVTGAQANAAASAADLQAVKLSVTAELATDYFALR 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Y + L + GA ++ + E +++S + ++ S Sbjct: 199 SLDTQKQLLDDSVRAYADALTLLEQQLAAGAIDASAVAQAETQLESTRTQDTDIDASRAQ 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 H I+TL+G A+ F + Q+ ++P I G+P+ L+ RPDI E+++A Sbjct: 259 LQHAIATLVGESASTFALPPRVQA------FHVPAIPAGVPSQLLERRPDIAAAERRVAA 312 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKS 342 + A+IG A++ +P L L+ S L ++SF + WS GP+L +FD G+ + Sbjct: 313 ANAQIGEARAAFFPDLVLSASAGL--ESSFFAPWLAAPSLFWSLGPQLAGTLFDGGRRSA 370 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++R A + +++TVL A ++VE+ L++++ Q A + S+ L+ Sbjct: 371 SLRGAHAQYDGAVADYRQTVLVAFQQVEDQLSALDALASEAGSQQRATDAADLSLRLTTN 430 Query: 403 NYRQGRYSLLDILDIE--RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G S LD++ + T + D A+R A+ V L A+G G+ Sbjct: 431 RFNAGAVSYLDVVTAQTIALTNRRTADQIDARRIEAE--VALLKALGGGWQ 479 >gi|269148469|gb|ACZ28612.1| RND efflux system outer membrane lipoprotein NodT family [uncultured organism] Length = 426 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 18/432 (4%) Query: 31 LLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 +LP ++ +KN + + KW SFND + KL+K A NL + A ++ A Sbjct: 1 MLPESWATEVAKNALTAEDAPAKWLASFNDPIMVKLIKEAKTNNLDLQVAAGNMDKAWLL 60 Query: 89 ILSVRADLFPSSYASI--SHRFIPNLKTNSTG---QLDSDWKIDLFGQ-RRHIESSLANL 142 A L P+ S+ S I + T S L + W++D++G+ R + ++ A+ Sbjct: 61 AKQSGAALKPTVDLSLGGSRSGIVDGGTASNNVNVGLQASWELDVWGRLRAGVSAAQASA 120 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 +A A A+ ++ + + +Y K++ I Q L K+ + ++ +++ G TS Sbjct: 121 QAAEADYIFAQHSLSANIAKTYFKVIEAKQQAEITRQNLSTLKETLRITQVRYDNGMTSA 180 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYI 261 + A + + + + T+E S R + LLG YP + N P L Sbjct: 181 QDVALNRANLATAKEQLITIEGSQRDATRALEVLLGRYPNAAL------EIPNELPALPS 234 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFP 318 P G+P++++ RPDI E+K+A + AK+ P SL S+ T D + Sbjct: 235 PPPAGVPSEILERRPDIVSAERKIAAAFNATDQAKAARLPRFSLTTSLNGTSDSLSDVLN 294 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 N W G L P+FD GK K ++ A ++ + + L A EVEN L Sbjct: 295 PANIAWQLGANLIAPLFDGGKRKIDVEIATVEQKQVISNYAQKALTAFSEVENNLDQGRV 354 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 L +E K+ ++ + Y++G LLD L I++ E +L KR + Sbjct: 355 LAHREAALSEVLEQSNKAYRIADLRYKEGEIGLLDTLQIQQQAIAAESNLLSIKRTQLEQ 414 Query: 439 YVDLYIAIGSGY 450 ++LY+A+G + Sbjct: 415 RINLYLALGGSW 426 >gi|71153375|sp|Q9KWV3|TTGF_PSEPU RecName: Full=Toluene efflux pump outer membrane protein ttgF; Flags: Precursor Length = 480 Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 104/478 (21%), Positives = 206/478 (43%), Gaps = 59/478 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDT-LKWWESFNDTSLNK 63 V L+GC++ P+Y +P P+ + G + D L W F D + + Sbjct: 12 VALSGCSLIPDYQRPPAPIQAGWPQGEAYAKLKAGTHRPSQTRDAELNWQVFFRDPVMRE 71 Query: 64 LVKIALQQNLTILQATERINA---------------AKENILSVR----ADLFPSSYASI 104 L+ AL N + Q + A A + + R ADL P+ A I Sbjct: 72 LIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQRLPADLSPTGEAGI 131 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIP 162 ++ L + +++D+FG+ R +E + L +A Q + ++ +I+ + Sbjct: 132 QSQYDTTLSMS--------YELDMFGRLRSLERAALQEYLAAAETQRSM-QIALIADVAI 182 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ R + ++ +A L Y+ ++ L G S L + + + +++ Sbjct: 183 AYLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVETARVQQTLY 242 Query: 223 EKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + +++ + LLG P ++ L QP ++ G+PADL+ +RP Sbjct: 243 TRQVAQDMNALQLLLGTKLPADLPISDVLD---------QP--LAALSTGLPADLLLHRP 291 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E +L + A IG A++ +PS++L G+ + D F G + W+F P++ LP Sbjct: 292 DIRAAEHRLLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLP 351 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G+++ N+ +++++ A +EV + L + + + + V+ + Sbjct: 352 IFTAGRLRGNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNN 411 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ Y +G + L +LD +R + + S V L+ A+G G++ Sbjct: 412 QAYYKLAYQRYDEGVDNYLPVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGGWD 469 >gi|116751096|ref|YP_847783.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] gi|116700160|gb|ABK19348.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] Length = 469 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 106/466 (22%), Positives = 205/466 (43%), Gaps = 41/466 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNS-------KNLINIDTLKWWESFNDTSLNKLV 65 L+GCT+ P+Y++P P+ P + G + + W + F+D L+K++ Sbjct: 14 AFLSGCTMAPKYSRPEAPV-PATWPSGPAYEDSQAVPGAPEASAIGWRDFFSDERLHKII 72 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNSTGQLDSD 123 + AL NL + A + A+ R +L P+ S S+ +P + + +D Sbjct: 73 ETALHNNLNLRLAALNVEMARAIYGIRRVELLPTLDGSASYVKSRVPADLSGKDHAVTAD 132 Query: 124 ----------WKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 W+ID FG+ R + E LA + A V I+ ++ I+++ Y+ Sbjct: 133 AYDVNLGIAAWEIDFFGRLRSLKDKALEEYLAT-EQARRSVQISLISDIARI---YLLLG 188 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A ++ + EL + G +L + + + +++ D + Sbjct: 189 ADRERLDLARSTVETQQTVYELVRRRHEVGLAPELDVRQAQTRVEAARVDEARYTRLVAE 248 Query: 229 NVHNISTLLGYP-ATEFLHY-MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ L G P A+E L + +N + I+ GI ++++ RPDI E L Sbjct: 249 GENALNLLAGSPVASELLPADLSSIGSNLE------ISPGISSEVLLRRPDILQAESMLK 302 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P +SL G+ + F ++ W+F P++ +PIFD + Sbjct: 303 AANANIGAARAAFFPRISLTTAFGTASGELAGLFKAGSSAWTFAPQIVMPIFD-ARTWWA 361 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ + + +Q+T+ A +EV +AL +T Q V+ + LS Sbjct: 362 LKATKVDREIAVTEYQKTIQTAFREVADALALFGTVDDQLTAQQSLVDASAATYRLSNAR 421 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G + L +LD +R+ + + L + + V LY +G G Sbjct: 422 YMKGIDNFLGVLDSQRSLYEAQQALIGTRLVRLTNQVRLYAVLGGG 467 >gi|239502565|ref|ZP_04661875.1| outer membrane protein [Acinetobacter baumannii AB900] Length = 464 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 93/413 (22%), Positives = 199/413 (48%), Gaps = 25/413 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLK 113 F+D L ++++I+L N + A I A++ + D P+ + A+ + P+ Sbjct: 59 FSDPRLLEVIEISLNNNRDLRTAALNIERAQQQYQITKYDQLPTIGATANAIRQVNPSGN 118 Query: 114 TN---STGQLD---SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N ST Q+ + +++D +G+ + + +++L N + + D +++++S++ ++++ Sbjct: 119 PNNPYSTFQVGLGVTAYELDFWGRVQSLKDAALNNYLATQSAKDSTQISLVSQVAQAWLN 178 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +++A Q L + L+ +F G S++ L + + +++ +D+ + Sbjct: 179 YSFATANLNLAQQTLKAQLDSYNLNQKRFNVGIDSEIPLRQAQISVETARNDVANYKTQV 238 Query: 227 RMNVHNISTLLGYPATEFLHYMQK-----QSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + ++ L G L Q Q NF + G+ +DL++NRPD++ Sbjct: 239 SQAQNLLNLLAGQAIPSNLLPTQSVKTITQEKNF--------STGLSSDLLQNRPDLKVA 290 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E +L + A IG AK+ ++P+++L GS + F WS GP + LPIFD G Sbjct: 291 EYQLRAAGANIGAAKARMFPTITLTGSAGYASTELKDLFKSGGFAWSVGPSIDLPIFDWG 350 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K+NI+ +E + +++ + + +EV +AL + ++ ++ + V + Sbjct: 351 TRKANIKVSEIDQKIALSEYEKAIQASFREVNDALAAHAHIEERLSAQRRLVSATDTTYK 410 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS +R G S L +LD +R+ + L + ++ + ++LY A+G G N Sbjct: 411 LSTARFRAGIDSYLTVLDAQRSAYAAQQGLLVLEQTKLNNQIELYKALGGGLN 463 >gi|167566908|ref|ZP_02359824.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 396 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 170/349 (48%), Gaps = 10/349 (2%) Query: 110 PNLKTNSTGQL--DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 P + + T +L D+ W++DLFG RR IES+ A +D+ ++++++L Y + Sbjct: 34 PGIGQSRTYRLGFDASWELDLFGGARRAIESADAQVDAIDEDRHAILVSLLAELASDYAE 93 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R+ IA + L+ +G + + + AE++ ++ +P L+ + Sbjct: 94 LRASQARLQIATDNVASLDATRRLTERSERRGLGTSFEVAQARAELELAQAALPPLQANV 153 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +H I L G E + +P+ + P+D+I RPD+R E++ A Sbjct: 154 ARLIHAIGVLTGGFPGELRDALSAPGATLPAAPRLPVTL--PSDMIGERPDVRAAERRFA 211 Query: 287 DSVAKIGIAKSDLYP----SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A+IG+A++ +P LSL + +L D F N WS + ++D G+ K+ Sbjct: 212 AATAQIGVARAAQFPHFAIPLSLGTTASLVQD-LFTSANVAWSVALEGTQTLYDGGRAKA 270 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A ++A+ I + + V A +EVE+ALT+I ++ L AV + + S + Sbjct: 271 GVSAARAAAEAARIAYAQRVRVAFREVEDALTAIYAERDRQAALVAAVGSSQDAQSRATR 330 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G L +L +RAT + L++++ + + LY A+G+G+ Sbjct: 331 LYRNGLNEYLSVLIAQRATYRARDALALSRLARVQGVIALYKALGAGWR 379 >gi|282890425|ref|ZP_06298952.1| hypothetical protein pah_c017o006 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499679|gb|EFB41971.1| hypothetical protein pah_c017o006 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 447 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 199/463 (42%), Gaps = 50/463 (10%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 VGP+Y P + P + N + WWE F+D LN L +A+ N + A Sbjct: 2 VGPDYRPPCIDA-PAAWKGPNEGPDFCEEVENWWEIFDDQRLNNLEALAVSNNRNLFAAF 60 Query: 80 ERINAAKENILSVRADLFP---------------------SSYASISHRFIPNLKTNSTG 118 ER+ A+ V ADL+P S++ + H + NL N + Sbjct: 61 ERVQEARYRAGVVAADLYPQFTLDPLYSNQEVLLKTLGAPSTFLRV-HELLYNLPLNLSY 119 Query: 119 QLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHFKERIS 175 Q+D L+G R + A + AQ++ + LN+ + L +Y R +I Sbjct: 120 QMD------LWG--RLTDQYYAAKYTWEAQIEDYRLVLLNLTTDLATAYYQLRAADSQID 171 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L K +++ ++ + + + E+++ + + + + + I+ Sbjct: 172 LLIATLKTRNKAFDINKSRYEAKIVNYSDVSRAGLEVQNALTQYEEMVRQRNVLENRIAV 231 Query: 236 LLGY-PATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKI 292 LLG P+ FL +M P +P I GIP++++ RPDI E+ +A + A + Sbjct: 232 LLGVQPSEFFLEHM--------PLTTLPPRIPAGIPSEVLLQRPDIAEIERNMASAHALV 283 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAE 348 A + +PSL L G + + + + H W +G + +FD + N+ Sbjct: 284 KAAYASFFPSLELTGLVGYSSP-ALKYFLKHKSFWWMYGASMDQTVFDGFRKTDNLCLQW 342 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 S+ +E +Q+ V A +EVENAL++I + + + AVE K + ++ Y QG Sbjct: 343 STFKEIGYQYQQQVFVAFQEVENALSNIQQYAEEYESSKKAVEWAKTTTKIARDRYFQGV 402 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD++D ER E+ + + S + L A+G +N Sbjct: 403 TFYLDVMDSERDELSAEIIQNNLQGLRFVSTIQLINALGGSWN 445 >gi|332535611|ref|ZP_08411377.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas haloplanktis ANT/505] gi|332034966|gb|EGI71488.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas haloplanktis ANT/505] Length = 457 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 108/458 (23%), Positives = 212/458 (46%), Gaps = 35/458 (7%) Query: 13 VLLAGCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL+GC ++ +P Q+ S +++ + +W + +LNK V+ AL+ Sbjct: 1 MLLSGCASDLNSSQRMQAPNNMPQQWQQEASSSVLKVQE-QWLTQLQNPTLNKFVQQALK 59 Query: 71 QNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTG-QLDSDWK 125 N +LQ + + K+ ++ A L+PS + S S P N++ L+ ++ Sbjct: 60 NNQQLLQTSYDVEIQKQQLIVSGAALWPSLDLSTRTSRSKDNRPVSYDNASSVSLNLTYE 119 Query: 126 IDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DL+G+ + ANL+ + A+ + AK +++ ++ + D + A Q+LDL Sbjct: 120 VDLWGKLSDAKRE-ANLNYLAQQARFEQAKQQLVADVVTGWFD-------VVTAQQLLDL 171 Query: 184 YKK-------NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +K+ N+++ + QG L + E+ + S I T S + ++ L Sbjct: 172 FKRREANSQQNLDIIEAGYRQGINEALDVYLARNELNNERSRIATQTASLSASARSLERL 231 Query: 237 LG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LG YP +++ P + I +G+P++LI +P +R +L + A + A Sbjct: 232 LGEYPKGAIT------ASSDLPVINTDIPLGLPSELITRKPTLRASWYELLAADASLAYA 285 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 +PSL L S++ + D + F + WS + P+F+ G++K+N A + Q Sbjct: 286 HKQRFPSLDLTASLSDSTDRVSDLFSPSSLAWSLLGSISAPLFEGGRLKANEEIARLNTQ 345 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +Q + +T+ +A +VENA++ K + A E + LS Y+ G + Sbjct: 346 KQEQLYLQTLYDAFGDVENAISQQQSLKAQYSSTLEAQENALAAEQLSFEQYQSGLVTYT 405 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +LD + + + L K QL + ++L+IA+G + Sbjct: 406 TVLDAQDRSFDAQSSLIDIKNQLIANRINLHIALGGDF 443 >gi|15641420|ref|NP_231052.1| multidrug resistance protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591269|ref|ZP_01678565.1| multidrug resistance protein, putative [Vibrio cholerae 2740-80] gi|153817757|ref|ZP_01970424.1| multidrug resistance protein, putative [Vibrio cholerae NCTC 8457] gi|153821341|ref|ZP_01974008.1| multidrug resistance protein, putative [Vibrio cholerae B33] gi|227081580|ref|YP_002810131.1| putative multidrug resistance protein [Vibrio cholerae M66-2] gi|229505015|ref|ZP_04394525.1| hypothetical protein VCF_000221 [Vibrio cholerae BX 330286] gi|229511315|ref|ZP_04400794.1| hypothetical protein VCE_002722 [Vibrio cholerae B33] gi|229518433|ref|ZP_04407877.1| hypothetical protein VCC_002457 [Vibrio cholerae RC9] gi|229608019|ref|YP_002878667.1| hypothetical protein VCD_002937 [Vibrio cholerae MJ-1236] gi|254848527|ref|ZP_05237877.1| multidrug resistance protein [Vibrio cholerae MO10] gi|255745789|ref|ZP_05419737.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholera CIRS 101] gi|262158931|ref|ZP_06030043.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae INDRE 91/1] gi|298498512|ref|ZP_07008319.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9655905|gb|AAF94566.1| multidrug resistance protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546874|gb|EAX57031.1| multidrug resistance protein, putative [Vibrio cholerae 2740-80] gi|126511695|gb|EAZ74289.1| multidrug resistance protein, putative [Vibrio cholerae NCTC 8457] gi|126521159|gb|EAZ78382.1| multidrug resistance protein, putative [Vibrio cholerae B33] gi|227009468|gb|ACP05680.1| putative multidrug resistance protein [Vibrio cholerae M66-2] gi|229345148|gb|EEO10122.1| hypothetical protein VCC_002457 [Vibrio cholerae RC9] gi|229351280|gb|EEO16221.1| hypothetical protein VCE_002722 [Vibrio cholerae B33] gi|229357238|gb|EEO22155.1| hypothetical protein VCF_000221 [Vibrio cholerae BX 330286] gi|229370674|gb|ACQ61097.1| hypothetical protein VCD_002937 [Vibrio cholerae MJ-1236] gi|254844232|gb|EET22646.1| multidrug resistance protein [Vibrio cholerae MO10] gi|255736864|gb|EET92261.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholera CIRS 101] gi|262029116|gb|EEY47768.1| outer membrane component of tripartite multidrug resistance system [Vibrio cholerae INDRE 91/1] gi|297542845|gb|EFH78895.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 484 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 215/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|255039270|ref|YP_003089891.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254952026|gb|ACT96726.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 460 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 120/480 (25%), Positives = 215/480 (44%), Gaps = 71/480 (14%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQ--FSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + +L A C V Y +P L TQ + +S++ I++ ++ W + F DT+L +L+ Sbjct: 10 VLTILAASCQVTKPYQRPE---LTTQGLYRGESSQDTISVASISWKQFFPDTALTQLITR 66 Query: 68 ALQQNLTILQATERINAAKENI--------------LSVRAD--LFPSSYASISHRFIPN 111 L+QN + A + I AAK ++ LSV+ FP + IS + Sbjct: 67 GLEQNPDLRIAMQHIVAAKASLQLSKSAFLPDLNGTLSVKQSKLAFPQGFGIISSTTQYD 126 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L L S W+ D++G+ R + +LA L + +I+ + +Y Sbjct: 127 LG------LGSSWEADIWGKLRSAKRGALAGLLRTEEARKAIRTELIADIAGNYYTLLVL 180 Query: 171 KERISIAHQILDLYKKN--------IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++++I L+ KKN L GA ++ + EA + E IP L Sbjct: 181 DQQLAI----LEKTKKNRFADVKAVTMLKEANILNGA----AISQSEANAYAAEIAIPAL 232 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + R + ++ LLG P+ Q+++N IP+ G+P+ L++NRPD++ Sbjct: 233 KNQIRETENALNLLLGQPSGAVTRTTLDQQKAN-------IPLKTGVPSQLLQNRPDVKQ 285 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDK 337 E L ++ +AK+ YP+L++ + T N + FG L PIF++ Sbjct: 286 AEYALWEAFENTNVAKTFFYPALTITANGGFTSFNFQDWLTSLGLFGNVAAGLTQPIFNR 345 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTK----LQHAV 390 G K+ + A++ ++ I Q+++L A +EV +AL + E ++I K L AV Sbjct: 346 GANKARLATAKARQEQAAIELQKSMLIAGREVSDALYAYETAGEQREIRVKQLASLAKAV 405 Query: 391 ELHKKSMSL-SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++K + S NY D+L E+ E+D + + + + LY A+G G Sbjct: 406 DANRKLLRFSSTTNY-------TDVLTSEQNLLAAELDAVNDRHRQWLAVIRLYHALGGG 458 >gi|313206600|ref|YP_004045777.1| rnd efflux system, outer membrane lipoprotein, nodt family [Riemerella anatipestifer DSM 15868] gi|312445916|gb|ADQ82271.1| RND efflux system, outer membrane lipoprotein, NodT family [Riemerella anatipestifer DSM 15868] gi|325335958|gb|ADZ12232.1| RND efflux system outer membrane lipoprotein [Riemerella anatipestifer RA-GD] Length = 478 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 106/434 (24%), Positives = 203/434 (46%), Gaps = 40/434 (9%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASI 104 T W E F D L L++ AL N +L + I AK +++ L PS + A + Sbjct: 52 TPPWREFFTDPHLVSLIETALNNNQELLITLQEIEKAKSSVMYRNGRLLPSVSVEAAAGV 111 Query: 105 SH--RF-----------------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 R+ IP+ N L +DW++D++ + R +S++A+ + Sbjct: 112 KKVGRYTSEGAGDASTQMEEGKPIPDPLGNFGIGLQADWEVDIWNKLRTEKKSAIAHYLA 171 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 + ++I+++ SY + + S + ++L +K +E+S ++ AT++LS Sbjct: 172 TVDGKNFVLSSLIAEVAQSYYELLALDSQYSYLKKYIELQRKALEVSKIQKQAAATTELS 231 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 + K EAE+ +++ T+++S ++I+ LLG F + + S F + I Sbjct: 232 VKKFEAELAKSSANLYTVQQSILEKENDINLLLG----RFYQPIPRSSAEFLDIVPQSIK 287 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTH 323 GIP++L+ NRPD++ E +L + + A+ + YPSL++ L SF P Y TH Sbjct: 288 TGIPSELLANRPDVKQAELELEAAKLDVEAARKEFYPSLNITFGAGL---ESFKPSYFTH 344 Query: 324 ------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI- 376 ++ L P+ +K IK+ A +S + + +T++ A EV N L I Sbjct: 345 FPESLAYNIVGDLVGPLINKSAIKAKFNTANASQLQALYEYNKTLIKAYMEVSNNLNKIK 404 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 N + K + +L +++ +S + + R +++L +R +++L AK Sbjct: 405 NYQQYFDLKHTQSKDLD-EAIGISNLLFTNARADYMEVLMTQRDALDAKMELIEAKNTQL 463 Query: 437 KSYVDLYIAIGSGY 450 + V LY ++G G+ Sbjct: 464 NATVYLYKSLGGGW 477 >gi|313110708|ref|ZP_07796571.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|310883073|gb|EFQ41667.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 397 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 170/337 (50%), Gaps = 12/337 (3%) Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + +++D +G RR S+L +L ++ +L ++S + SY+ +E+ IA Sbjct: 58 LSASYEVDFWGGRRAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQRIAR 117 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 LD + + L + G+ + L + + + + S +P LE+ + ++TL+G Sbjct: 118 LNLDNAEHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLATLIG 177 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P + +Q F + G+P++L+ RPDI E +LA + A + +A++ Sbjct: 178 EP----VQALQVAERPFDSLRWPETGTGLPSELLSRRPDIANAEAQLAAAQADVQVARAA 233 Query: 299 LYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 L+P L+L+ S++ + + + N +++ G L PIF+ G++++ R+ + +E T Sbjct: 234 LFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEELLET 293 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ +L A + E +L SI+ + + Q +E +++ LS Y+ G +LL +LD Sbjct: 294 YRKAILTAFADTERSLNSIDGLDRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLTVLDT 353 Query: 418 ER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R A V L +A+ Q + V LY A+G G+ Sbjct: 354 QRTLYAAQDAAVQLRLARLQ---ASVGLYKALGGGWQ 387 >gi|53721659|ref|YP_110644.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|167897410|ref|ZP_02484812.1| outer membrane efflux protein [Burkholderia pseudomallei 7894] gi|167921981|ref|ZP_02509072.1| outer membrane efflux protein [Burkholderia pseudomallei BCC215] gi|217425505|ref|ZP_03456998.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|226195034|ref|ZP_03790625.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|254198633|ref|ZP_04905053.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|52212073|emb|CAH38080.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|169655372|gb|EDS88065.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|217391468|gb|EEC31497.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|225932839|gb|EEH28835.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] Length = 460 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 188/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|293602084|ref|ZP_06684537.1| outer membrane efflux protein OprC [Achromobacter piechaudii ATCC 43553] gi|292819486|gb|EFF78514.1| outer membrane efflux protein OprC [Achromobacter piechaudii ATCC 43553] Length = 492 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 127/485 (26%), Positives = 213/485 (43%), Gaps = 70/485 (14%) Query: 17 GCTVGPEYTKPHMPL--------LPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVK 66 GC VGP Y KP LP + + D L+ WW+ F D LN+L + Sbjct: 20 GCAVGPTYEKPSAAAPAAFKEAALPASEAGTWKPAEPSEDALRGAWWKIFGDEGLNQLQE 79 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--------- 117 A Q N + A R+ ++ RA FP+ A+ F PN + S Sbjct: 80 EAQQANQNLQAAAARLAQSRALQREARAGFFPTLDAA----FGPNRQRPSAVSQGLPDGT 135 Query: 118 ---------GQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 Q ++ DLFG+ + ++ Y V +A + + + +Y Sbjct: 136 STSPVTTWRAQGAVSYEADLFGRVASTADAATADAQQSEALYRSVLLA---LQADVATTY 192 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R + Q + L ++L ++ G S+L L + +AE+ S +S+ +++ Sbjct: 193 FLVREQDAESQLYRQTVKLRTDTLQLIQRRYDAGDISELDLARAKAELASAQSEALGIDR 252 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP----NLYIPINIGIPADLIRNRPDIRY 280 H ++ LLG ++F P + + I G+P+ L+ RPDI Sbjct: 253 RRAAAEHALAVLLGRAPSDF---------TMPPLPIEKVALSIPAGLPSTLLERRPDIAA 303 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---------FGPKLY 331 E+ +A + A++G AKS +P L + G A +++S G WS G L Sbjct: 304 AERAMAAANARVGAAKSAFFPRLDITG--AFGYESSDLGNLFQWSSRTFLLGPLVGAALS 361 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIFD G+ ++ + RA + +E +++TVLNA +EVE+ L ++ AV+ Sbjct: 362 MPIFDGGRRQAGLDRARAVYEEDVAVYRQTVLNAFREVEDNLANLRILADQTKAQDAAVD 421 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ LS YR+G S LD+++ +R+ +V V LS + A+S V+L AIG Sbjct: 422 ASARAAKLSHTQYREGSISYLDVIEADRSVLLQQRVAVQLSGEQ---ARSAVELIRAIGG 478 Query: 449 GY-NP 452 G+ NP Sbjct: 479 GWGNP 483 >gi|256422588|ref|YP_003123241.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256037496|gb|ACU61040.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 472 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 108/467 (23%), Positives = 214/467 (45%), Gaps = 43/467 (9%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 LL C V + P P LP F + + I L W F D +L L+ A+++N Sbjct: 18 LLEACKVSKDTPAPQ-PELPVAFRNSATADSTTIADLPWENFFTDATLKTLIDNAIKKNY 76 Query: 74 TILQATERINAAKENILSVRADLFPSS----YASISHRFIPNLKTNSTGQ---------- 119 + A + AA+ + + PS+ AS S +L S Q Sbjct: 77 DMQAAILSVEAARLQMRQAKLLNLPSAKLNVVASTSRPSDNSLNGISLSQFLGTQHLEDY 136 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFK 171 + W+ D++G+ + + +LA AY Q + + + ++++ + ++ + Sbjct: 137 SANIQFAWEADIWGKIKNQKKEALA----AYLQTEESRKLLQTDIVATVSKAFYNLLMLD 192 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++++A L L + + L++ G + +++ + EA+ + IP +E+ + + Sbjct: 193 EQLAVAQNNLKLNDSTLRIIRLQYDAGQVTLVAVQQAEAQQLTAAQLIPQIEQDMTVQEN 252 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + L G E +++ + + L ++ GIP+DL+ RPD++ E L + A+ Sbjct: 253 ALRILSG----ELPAAIERHTKLNEYPLTDKLSAGIPSDLLSRRPDVKSSELALNIANAR 308 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKGKIKSNIRRA 347 +G+AK+++YPSL + S L + S FG + P+FD+ +K+ A Sbjct: 309 VGVAKANMYPSLVITASGGLNAVKFSDWFQVPTSLFGLATGAIAQPLFDRKNLKTQFEVA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKK----IVTKLQHAVELHKKSMSLSMIN 403 + ++ + +++ VL A EV +AL I + K TK+Q LH+ + S + Sbjct: 369 KIQREQSVLRFRQNVLEATGEVADALVKIEKLKSQYDIASTKVQT---LHQAVNNASQL- 424 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + GR S L+++ + + E+++S +R + VDLY ++G G+ Sbjct: 425 FESGRASYLEVIIAQSNVLQSELEVSNLRRDQLYAVVDLYRSLGGGW 471 >gi|167827325|ref|ZP_02458796.1| outer membrane efflux protein [Burkholderia pseudomallei 9] Length = 422 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 188/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 21 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 80 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 81 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 140 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 141 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 200 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 201 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 255 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 256 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 314 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 315 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 374 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 375 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 420 >gi|94314240|ref|YP_587449.1| heavy metal cation tricomponent efflux outer membrane porin ZniC [Cupriavidus metallidurans CH34] gi|93358092|gb|ABF12180.1| heavy metal cation tricomponent efflux outer membrane porin ZniC (CzcC-like) [Cupriavidus metallidurans CH34] Length = 518 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 104/479 (21%), Positives = 209/479 (43%), Gaps = 54/479 (11%) Query: 14 LLAGCTVGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTL--KWWESFND 58 +L C VGP + P P LPT+ + G ++ + + +WW + Sbjct: 28 VLTACAVGPNFQTPKAPDATAYTPKPLPTETASAPVQGGEAQRFVEGMQIPEQWWSMLHS 87 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG 118 L++ + A++ N T+ A + A+ + + + FP+ IS + P+ + N+ G Sbjct: 88 EKLDRFIAAAMKANPTVTAAQAALRQAQAQVRAQQGFFFPT----ISGSYSPSRQRNAVG 143 Query: 119 ------------------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISK 159 +L + D+FG RR +ES A D+ +V+ L + S Sbjct: 144 TISPTLTSGDPLFNLHTAELSISYAPDVFGLNRRRVESLQALEDAQRFEVEATYLTLASN 203 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + + I+ + +I +I+ + K L +FT G S L + A++ E + Sbjct: 204 ISLAAIEEASLRAQIDAQQRIVAIETKLYNLLQKQFTLGFVSGLEVAAARAQLAQAEQAL 263 Query: 220 PTLEKSFRMNVHNISTLLG-YPA----TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 P L K + ++ L G PA EF ++F+ +P+++ P++L+R Sbjct: 264 PGLRKQLALQRDLLAALAGKLPADPLDAEFTF------DDFKLPAELPVSL--PSELVRQ 315 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLY 331 RPD+R E +L + A++G+A +++ P L++ GS A + F N WS + Sbjct: 316 RPDVRAAEAQLHSATAEVGVAIANMLPQLTITGSYGGTATVFNQMFSAGNVFWSLAGNVA 375 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 F G + + A+++ + ++ TV+NA + V + L +I+ D + + + + Sbjct: 376 QTFFAGGTMLALKHGADAALVQAEAQYRSTVINAFQNVADTLHAIDADAETLRAAITSEQ 435 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ ++ G ++L +L+ E+ + A+ V LY ++G G+ Sbjct: 436 AARTTLEITEKQLSSGYVNVLAVLNAEQTMRTATQATAQAQAARFTDTVALYQSLGGGW 494 >gi|241762309|ref|ZP_04760390.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373212|gb|EER62842.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 471 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 109/479 (22%), Positives = 224/479 (46%), Gaps = 50/479 (10%) Query: 6 AIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DTLKWWESFNDT 59 +++S FI ++LA C+ P T P+ P+Q ++ + D KWW ++ND Sbjct: 10 SLYSGFIATLILAACS--PFKT----PVPPSQVAVPSQFAQAAAGQASDISKWWLAWNDP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIP 110 +L K+++ L+ NL + A + I AK N ++ L P+ +R++ Sbjct: 64 ALTKVIEDTLKANLDLRIARDHIQEAKSNFKMTKSSLSPTIGVTGNIAGGGTDSRNRYLN 123 Query: 111 NLKTNST--------GQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKL 160 + +S+ + + W DLFG R H ++ A + AQ+ ++ + +++ Sbjct: 124 SFSNDSSDPTSVGHIAGVTASWDADLFGAR-HADAKAAKAEVLGQEAQLHQIQMAIAAEV 182 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y + ++R+++ Q L L + + +F G + + L+ +I + S P Sbjct: 183 ASYYTGIQCLRKRLALIDQRLILLENLKSYTQARFNAGQATLSDIKGLDVQINILHSYRP 242 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIR 279 LE + ++ +I+ L G + +S + P G +P+ ++ RPDI Sbjct: 243 DLESAIAASLRHIAILGGKTPENVEIAISPES------VTPPAPAGELPSTVLNRRPDIA 296 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 E + ++ ++ AK+DL P L +G I + + F N+ YLPI Sbjct: 297 AAEANINAALNRLKSAKADLLPRFGLQFFGGDGRIRFSGLSGFS--NSGGIMALTAYLPI 354 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G++ ++I ++ E + + +L+A+ EVENA + + K + +L A+ + Sbjct: 355 FTAGRVHAHIALEDAKLDEAVAFYDKKLLSALTEVENAYQARSSQDKRIMQLSQALATTE 414 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK--RQLAKSYVDLYIAIGSGYN 451 +++++ Y+ G+++L ++L E KV+ D S+ + +Q + ++LY A+G G++ Sbjct: 415 QNITVEQGLYQGGKHTLQNVL--ETKLDKVDKDDSLIQTIQQQQMATINLYYALGGGWS 471 >gi|53711480|ref|YP_097472.1| outer membrane protein oprM [Bacteroides fragilis YCH46] gi|60679750|ref|YP_209894.1| putative outer membrane lipoprotein [Bacteroides fragilis NCTC 9343] gi|265764879|ref|ZP_06093154.1| outer membrane protein oprM [Bacteroides sp. 2_1_16] gi|52214345|dbj|BAD46938.1| outer membrane protein oprM precursor [Bacteroides fragilis YCH46] gi|60491184|emb|CAH05932.1| putative outer membrane lipoprotein [Bacteroides fragilis NCTC 9343] gi|263254263|gb|EEZ25697.1| outer membrane protein oprM [Bacteroides sp. 2_1_16] Length = 463 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 116/465 (24%), Positives = 213/465 (45%), Gaps = 45/465 (9%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ ++ + +N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPKDIEASGLYRDTVSVADTLVSDTVNFGNLPWREVFTDPQLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-QLDS 122 L N +L A ++ A+ +++S R PS S F + T + + Sbjct: 73 QGLTHNTDLLTAALKVKEAQASLMSARLAYAPSLGLSPQGTISSFDKHAATKTYSLPATA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFG+ +R + +L AY Q + +IS + +Y ++ I Sbjct: 133 SWEIDLFGKLLNAKRGAQVTLLQ-TKAYRQA--VQTQIISGIANTYYTLLMLDRQLDITE 189 Query: 179 QILDLYKKNIELSHLKFTQGA----TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 Q D+ K+N+E ++ + A T+ + + +A + + IP ++KS R + +S Sbjct: 190 QTADIMKRNVE--TMQAMKDAAMFNTTSAGVEQSKAAYAQVLASIPAIQKSIREAENAMS 247 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL P T +++Q L ++G+P L+ NRPD++ E LA + Sbjct: 248 MLLAQAPQTIKRGVLEEQ------QLPEDFSVGVPLQLLSNRPDVKAAEMALAGTYYNAN 301 Query: 294 IAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ YP ++++GS T+ PG G L P+F +G + ++ A++ Sbjct: 302 SARAAFYPQITISGSAGWTNSAGSAIINPGKLLASVLG-SLTQPLFYRGANIARLKIAKA 360 Query: 350 SAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +E + +Q+++LNA EV NAL +K KLQ VE +K+ + ++ G Sbjct: 361 QQEEAKLAFQQSLLNAGSEVSNALYQYQSASEKTASRKLQ--VESSEKASEYTKELFKLG 418 Query: 408 RYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L E++ +A++ +V+ + + Q + V LY A+G G Sbjct: 419 TSTYLEVLSAEQSLLSARLSQVNDTFDRMQ---AVVSLYQALGGG 460 >gi|330993832|ref|ZP_08317764.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329759100|gb|EGG75612.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 524 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/465 (21%), Positives = 210/465 (45%), Gaps = 38/465 (8%) Query: 14 LLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFNDTSLNKLV 65 +L GC + P Y H LLP + ++ T + WW+ F D +L++L Sbjct: 13 MLGGCVDLAPRYRHAHY-LLPDNW---KGDGVVQYGTPQDGASRGDWWKVFRDPTLDELE 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNST 117 + A N + E A++ + +A+L+P S + +HR + Sbjct: 69 ERASHLNPNLQADAEAFTQARDIVAEAQANLYPQITGGAGASENQASTHRLWRGAGSQGP 128 Query: 118 GQLDSD-------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + S+ W+ D + R +A A +A+L++ S+L Y+ R Sbjct: 129 IYMSSEQYSATARWEPDFWSAIRNRRRMQQRLAQAAAADFAVARLSIQSELANDYMQLRG 188 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ + Y+ ++++H++ + + + + + ++ S ++ L+ + Sbjct: 189 MDAQHAVYRDSIRYYQTAVQITHMRQAGAIAAGIDVSRAQTQLSSTQAADTDLQAHRSVM 248 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 H I+ L+ + F H + +F P +P+ +GIPA L+ RPDI E+ +A + Sbjct: 249 EHAIAILVNVSPSLF-HIAPRAQISF-PK--VPMPVGIPATLLERRPDIASAERHMAAAN 304 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG++++ YP ++ + + DN F N +++ + LP+F G ++ ++R Sbjct: 305 RAIGVSRAAFYPHVTFSATAGFM-DNGFTLDKFANGMYNYAAQAVLPLFQGGLRRAEVQR 363 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ-HAVELHKKSMSLSMINYR 405 S ++ ++ TVL+A K+VE+ L S+ D + Q AV+ ++ +++M Y Sbjct: 364 NWSQYRQAEDQYRATVLDAFKDVEDGL-SLTHDLDVEAGQQAEAVQASMRTQNMTMQLYT 422 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + LD++ + A + + + + ++ V+L A+G G+ Sbjct: 423 GGLTNYLDVVVAQVAALQARIAEVQVETRYMQAQVELIRALGGGW 467 >gi|332186117|ref|ZP_08387863.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332013932|gb|EGI55991.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 467 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/431 (23%), Positives = 192/431 (44%), Gaps = 32/431 (7%) Query: 8 FSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F+L I +LLAGC+V P+ P+ P + +GN++ + ++WW D L+++V Sbjct: 4 FALAIGLLLAGCSV-PQTHPAIAPIAPDRLGLGNAQ--APMVAVEWWRGLGDAQLDRIVA 60 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRF-IPNLKTNST- 117 AL N ++ A R+ A+ + S RAD P Y+ IS R+ IP +T Sbjct: 61 DALSGNPSLDVALARVRQAESVLASRRADNGPDVSLDAQEQYSRISGRYTIPPPFAGTTQ 120 Query: 118 ----GQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDARHFKE 172 Q + +W IDLFG++ + A A V A+L + S + +Y++ + Sbjct: 121 WLGQAQANLNWTIDLFGRQAAAIQAARASTRAAALDVTAARLAIASSVTQTYVELARAER 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +IA + ++ L+ + S+L + + + + E ++ + Sbjct: 181 QAAIARSTIATRTNSLSLTQARIRNNLASRLDATSAQTLLAQAQVALARAEAQAALSRNA 240 Query: 233 ISTLLG----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 ++ L G YPAT ++ F L +P + PADL+ RPDI ++ + Sbjct: 241 LAALAGRGLDYPATIAPTHL-----TFDTALPMPATV--PADLLSRRPDIAAALTRIEAA 293 Query: 289 VAKIGIAKSDLYPS---LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +A+ P+ ++L G A+ N GP ++LPIFD G++++ + Sbjct: 294 NAGQEVARKAFLPNVNLMALAGFQAVGLGNLLTADAGTIGAGPAIHLPIFDSGRLRAGLA 353 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + + V+ A++E +A+T ++ + V ++ L+ I Sbjct: 354 GATAALDLATADYNDRVVGAVREAADAVTRSRAIATERSRQRDVVRGLAETRRLNAIRVS 413 Query: 406 QGRYSLLDILD 416 G S L ++D Sbjct: 414 SGLQSQLGLID 424 >gi|293414625|ref|ZP_06657274.1| outer membrane channel protein [Escherichia coli B185] gi|291434683|gb|EFF07656.1| outer membrane channel protein [Escherichia coli B185] Length = 457 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 LPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|134293444|ref|YP_001117180.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134136601|gb|ABO57715.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 475 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 112/480 (23%), Positives = 206/480 (42%), Gaps = 53/480 (11%) Query: 9 SLFIVLLAG----CTVGPEYTKPHMPLLPT----------QFSIGNSKNLINIDTLKWWE 54 +L +L AG C++ P Y +P P+ T Q + + + D L W + Sbjct: 4 TLIALLCAGALGACSLDPTYQRPAAPIDDTWSTAAAPAQPQTAQSTAAAPLGAD-LGWRD 62 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNL 112 F D L KL+++AL N + A + + RA+L P+ + S++ + Sbjct: 63 FFKDPRLQKLIELALANNRDMRVAALNVAQYEAQYRIARANLGPAIDASGSVTREHMAGS 122 Query: 113 KTNSTGQLD----SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + + + W+ID FG+ R+ +E LA D+A I ++I+ + Sbjct: 123 TSAYSSSSASVGLTSWEIDFFGRLRSLKRQALEQYLAT-DAARTSTQI---SLIATVATD 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + + IA + + +L+ G+ S + + E + S S + + Sbjct: 179 YLQLLSDEASLQIAQNTVAADQHTYDLTVNMMKLGSASLQDVRQAENSLASARSSLASYT 238 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + +++ +G P + L Q S + I G+P+DL+ RPDI E Sbjct: 239 RAVAQDRNDLVAEIGAPLPDDLP--QGPSLMESEHTLADIGAGVPSDLLARRPDIVEAEH 296 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +P + L S T N F W+F P + +PIFD G Sbjct: 297 TLKAANANIGAARAAFFPKIELTASAGTTSSGLSNLFKAGTGAWAFAPSISVPIFDFGYN 356 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVELH 393 ++++ A+ +++ + A KEV NAL T + D+ V+ Q +L Sbjct: 357 RASLDVAKVEKDIDVANYEKAIQTAFKEVSNALAGRTTYVTQVAADRDYVSSAQQYYDLA 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +YR G S L +LD +R TA+ ++ + +Q + + LY +G G++ Sbjct: 417 QA-------HYRSGTDSFLTLLDAQRTLYTAQQQLVTDMLAKQ--SNLITLYKVLGGGWS 467 >gi|296135108|ref|YP_003642350.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] gi|295795230|gb|ADG30020.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] Length = 481 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 104/461 (22%), Positives = 215/461 (46%), Gaps = 32/461 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNS-----KNLINIDTLKWWESFNDTSLN 62 I++LA C P P P+ LP ++ S + + WW F+D L Sbjct: 15 LILMLAACAATP----PEAPVKIALPASYAQAQSGWEPAQAMAAAPRGAWWSVFDDPVLA 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG---- 118 L Q N ++ A+ + +A +P+ A S + G Sbjct: 71 GLETQVAQHNQSLAAQLAAYEQAQAALSQAQAAYYPAVTAGASANRARTAGNGAVGNSLS 130 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W+ DL+G+ R +++ A ++ A + +L++ S L SY+ R +I + Sbjct: 131 ASLGASWEPDLWGKVRLQVQAGQATAAASAATLANTQLSLQSTLATSYLQLRTVDAQIVL 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-IST 235 A + Y++ ++++ ++ G + + ++ ++ + L + R+ + N I+ Sbjct: 191 AQNTVAAYQRALQITDNRYKAGVGTAADVASARTQLLQAQTSLTDLGVT-RVQLQNAIAV 249 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P EF +++ P +P I GIPA L++ RPD+ + ++ + A+IG+ Sbjct: 250 LVGKPPAEF----SLSASDTLPE--VPAIPAGIPAQLLQRRPDLAAAQAQVQAANAQIGV 303 Query: 295 AKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +P+L+L+ GS A F + WS GP+L +FD G ++ ++ ++++ Sbjct: 304 AQTAWFPNLTLSAQGGSQAARIAELFSAPSLFWSIGPQLAATLFDGGLRRAQVQSSQAAY 363 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ ++++VL A+++VE+ L + + + V+ + S+ L+ Y+ G Sbjct: 364 RQTVANYRQSVLTALQQVEDNLAAQRILAQEAQQQAEVVQAAEVSLRLAENQYKAGTAPY 423 Query: 412 LDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+++ + AT+ L++ R+ A S V L A+G G+ Sbjct: 424 LNVITAQTTATSARNAQLTLLNRRYAAS-VALIQALGGGWG 463 >gi|153829958|ref|ZP_01982625.1| putative multidrug resistance protein [Vibrio cholerae 623-39] gi|148874544|gb|EDL72679.1| putative multidrug resistance protein [Vibrio cholerae 623-39] Length = 484 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/443 (23%), Positives = 211/443 (47%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE------NILSVRADLFPSSYAS-ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ I S +L S+ S +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLELAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ ++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGTQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|83721659|ref|YP_442808.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|257139020|ref|ZP_05587282.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83655484|gb|ABC39547.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 535 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 87/379 (22%), Positives = 175/379 (46%), Gaps = 27/379 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 61 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 113 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRF--IPNLKTNS------TGQLDSDW 124 A + + AA+E + + + + L PS A + R +P + GQL + + Sbjct: 114 AAEKNLTAAREQLRAQIGSSLLPSIDAGGQATRERALGVPAFGPQTVLYNVFAGQLQASY 173 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + ER++ +++ L Sbjct: 174 TLDLFGAARFANRALSKRVDMNAYQLESARRALAANIVTAALTSAALAERVATTERLVAL 233 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ + ++E+ +P L + ++ H ++ LLG T Sbjct: 234 AREQANDAAARHRLGAASRTDMLNAQQSAAALEASLPALRQQWQTTRHALAVLLGR--TP 291 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + Q +P+ + P+ L++ RPDIR E L + +++G+A + ++P L Sbjct: 292 DAAPADLALADVQLPQDVPVVV--PSTLLQARPDIRAAEAGLQAAASEVGVATAQMFPQL 349 Query: 304 SLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL+ S+ N G WS G L P+F G + + R A ++ +++ Sbjct: 350 SLSASMGHAGFNWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARATYDAAVDQYRQ 409 Query: 361 TVLNAIKEVENALTSINED 379 TVL A ++V + L +++ D Sbjct: 410 TVLAAFQDVADKLAALDND 428 >gi|170695213|ref|ZP_02886360.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170139833|gb|EDT08014.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 522 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 190/429 (44%), Gaps = 48/429 (11%) Query: 15 LAGCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESF 56 LAGC+ GP P MP + QF +G +WW + Sbjct: 38 LAGCSFGPNGEPPAMPQPLHYGSEAQPAQTVAAQGVAQQFMVGGKP------VPEWWTLY 91 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--IP 110 +LN LV L + T+ + + AA+E + + + + + P+ A + +R IP Sbjct: 92 RSDALNALVDEGLHNSPTLAATEQTLAAAREQLRAQIGSSMLPTIDAGGQATRNRALAIP 151 Query: 111 NLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPS 163 + N+ GQL + + IDLFG R +++LA + A Q+D A+ + + ++ + Sbjct: 152 EIGPNTFLYNIFVGQLQAHYTIDLFGAARLADAALAARVNVQAYQLDAARRALAANIVSA 211 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I + + +I +++ L + ++ GA S + + S+ + +P L Sbjct: 212 AITSAALRAQIDTTERLVTLANDQAHDTARRYALGAVSHADQLSAQQSAASLSASLPGLR 271 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQ 281 + ++ H ++ LLG +Q S L++P + + +P++L+R RPDI+ Sbjct: 272 QQWQTTRHALAVLLGRTPDAAPDDLQLVS------LHLPEQVPVVVPSELLRARPDIQAA 325 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + L + A +G+A + +YPSLSL+ S+ + + G WS G L P+F G Sbjct: 326 DAALKAAAADVGVATAQMYPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHGG 385 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + R A ++ + +++TVL A + V + L ++ D + + A + Sbjct: 386 ALMAQRRAAMNTYEATVSQYKQTVLAAFQNVADTLAALEHDAQALDAASTAARSAQGVFD 445 Query: 399 LSMINYRQG 407 + YR G Sbjct: 446 ETSARYRLG 454 >gi|260768056|ref|ZP_05876990.1| outer membrane component of tripartite multidrug resistance system [Vibrio furnissii CIP 102972] gi|260616086|gb|EEX41271.1| outer membrane component of tripartite multidrug resistance system [Vibrio furnissii CIP 102972] Length = 484 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 104/443 (23%), Positives = 203/443 (45%), Gaps = 48/443 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----------WWESFND 58 L ++LAGC+ T H L T + ++++L + T WWE + D Sbjct: 23 LSTLILAGCS-----TPNHSDELGT---VADARDLQSQQTFANHAAMDWPSDHWWERYQD 74 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKE------NILSVRADLFPSSYAS-ISHRF--- 108 LN+L+ A +Q+ T+ A R+ A+ S+ L S+ S +S+++ Sbjct: 75 AQLNQLIDEAFEQSPTLQIAMARLKNAQGLAQQAGAARSLNVGLSASATESKVSYQYQAA 134 Query: 109 IPNLKTNSTGQL--DSDWKIDLFGQRRHIESSLANLDSAYAQVDI-AKLNVISKLIPSYI 165 +P N G L + + D +G+ R + ++ +A + A+L + + + +Y Sbjct: 135 MPPHGWNDYGSLTLNFQYDFDFWGKNRAAVVAASSELAAAEAEGVSARLMLATSIANAYA 194 Query: 166 D-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + AR + + ++ L + K +EL ++ G + S+ + A S+E+++ L + Sbjct: 195 ELARLYANQHTV-DAALGVRNKTVELLQKRYDNGLETLGSVSQARAIAASVEAELLGLNE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L G L + P + + G+P D L+ +R DI Sbjct: 254 SIQLQKNALAALAGQGPDRALTIQE-------PQVALNARYGLPTDAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A DN F N GP +YLP+F Sbjct: 307 ARWRAEAAAQRVGIAEAQFYPDVTLSAFIGYQAFGLDNLFNSGNDAGGIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++ + A++S QE + T+ A+ EV + +TS K + K + AVE ++++ Sbjct: 367 GRLDGQLTSAQASYQEAVGGYNATLTQALHEVADVVTSTQALDKRIAKTEEAVEQAQRAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 QIASNRYQGGLATYLDVLVAEES 449 >gi|167905764|ref|ZP_02492969.1| outer membrane efflux protein [Burkholderia pseudomallei NCTC 13177] gi|237507781|ref|ZP_04520496.1| outer membrane efflux protein [Burkholderia pseudomallei MSHR346] gi|234999986|gb|EEP49410.1| outer membrane efflux protein [Burkholderia pseudomallei MSHR346] Length = 460 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 188/408 (46%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP ++ Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTMQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSKSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|326798543|ref|YP_004316362.1| transporter hydrophobe/amphiphile efflux-1 (HAE1) family [Sphingobacterium sp. 21] gi|326549307|gb|ADZ77692.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Sphingobacterium sp. 21] Length = 1524 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 111/487 (22%), Positives = 218/487 (44%), Gaps = 50/487 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTS 60 A+ L I+LL+ C V E H + P + N + + D T+ W F D Sbjct: 1045 AVAVLGILLLSSCGVQKETELTHRKV-PAHYLGKNQTDTLANDSTSMATISWRTFFQDEY 1103 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------SYASISHRFIP 110 L +L+ AL N + QA R+ A+ N+ + LFPS Y + I Sbjct: 1104 LLRLIDTALANNPDMQQALYRVEMARANMRLRKNALFPSIDAVAEAGLRKYGFYTMDGIG 1163 Query: 111 NLKTNSTGQLDSD-----------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 N TN + L D W+ID++G+ + +++ A ++Y + Sbjct: 1164 NYDTNFSNNLKDDEQVPDPVPDYFLGLRASWEIDIWGKLKNRKKAAFARFLASYEGRKLV 1223 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + +I+++ +Y + + I + + L +++ EL ++ G ++L + ++ A + Sbjct: 1224 QTQLIAEIAAAYFELLALDNELDILEKNIALQQESYELVQVQKEGGRATELGVQQMRAIL 1283 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADL 271 + +S T+ + + ++ L G F ++++ L + +G+PA + Sbjct: 1284 MNSKSRKETVLQQINSKENYLNFLCG----RFSSPIERKQEELDAYPLASAVRVGLPAKM 1339 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG- 327 + RPDIR E L + + A++ PSL+ + G A F + ++G Sbjct: 1340 LALRPDIRAAELNLLAAKGDVKAARAAFLPSLNFSPYFGFQAFDLSKLFVTSPSSIAYGL 1399 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L PIF++ I+SN + ++ +Y +++TVL A +EVE T +N + ++ + Sbjct: 1400 LGGLTAPIFNQRMIRSNYEQELANKGIEYQEYEKTVLKAWQEVE---TELNAQRHLIARR 1456 Query: 387 ---QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 QH V+ + ++ S ++ GR + LD++ +R E+ L+ + +S V+LY Sbjct: 1457 SFNQHEVDALRLAVDASSELFKAGRANYLDVITSQRNVLDAEITLNSTYLEYLQSIVNLY 1516 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 1517 KALGGGW 1523 >gi|315022095|gb|EFT35124.1| RND efflux system, outer membrane lipoprotein, NodT family [Riemerella anatipestifer RA-YM] Length = 478 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 105/434 (24%), Positives = 203/434 (46%), Gaps = 40/434 (9%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASI 104 T W E F D L L++ AL N +L + I AK +++ L PS + A + Sbjct: 52 TPPWREFFTDPHLVSLIETALNNNQELLITLQEIEKAKSSVMYRNGRLLPSVSVEAAAGV 111 Query: 105 SH--RF-----------------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 R+ IP+ N L +DW++D++ + R +S++A+ + Sbjct: 112 KKVGRYTSEGAGDASTQMEEGKPIPDPLGNFGIGLQADWEVDIWNKLRTEKKSAIAHYLA 171 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 + ++I+++ SY + + S + ++L +K +E+S ++ AT++LS Sbjct: 172 TVDGKNFVLSSLIAEVAQSYYELLALDSQYSYLKKYIELQRKALEVSKIQKQAAATTELS 231 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 + K EAE+ +++ T+++S ++I+ LLG F + + S F + I Sbjct: 232 VKKFEAELAKSSANLYTVQQSILEKENDINLLLG----RFYQPIPRSSAEFLELVPQSIK 287 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTH 323 GIP++L+ NRPD++ E +L + + A+ + YPSL++ L +F P Y TH Sbjct: 288 TGIPSELLANRPDVKQAELELEAAKLDVEAARKEFYPSLNITFGAGL---EAFKPSYFTH 344 Query: 324 ------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI- 376 ++ L P+ +K IK+ A +S + + +T++ A EV N L I Sbjct: 345 FPESLAYNIVGDLVGPLINKSAIKAKFNTANASQLQALYEYNKTLIKAYMEVSNNLNKIK 404 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 N + K + +L +++ +S + + R +++L +R +++L AK Sbjct: 405 NYQQYFDLKHTQSKDLD-EAIGISNLLFTNARADYMEVLMTQRDALDAKMELIEAKNTQL 463 Query: 437 KSYVDLYIAIGSGY 450 + V LY ++G G+ Sbjct: 464 NATVYLYKSLGGGW 477 >gi|83717425|ref|YP_438647.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|257141715|ref|ZP_05589977.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83651250|gb|ABC35314.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 494 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/473 (21%), Positives = 209/473 (44%), Gaps = 43/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMP---------LLPTQFSIGNSKNLINIDTL---KWWESFNDTS 60 L+ GC VGP++ +P P + F+ + + D WW F Sbjct: 26 ALVTGCAVGPDFVRPEPPRVDAYVPGGAVRASFAASGATQTLAPDAPFPDAWWRLFGSHD 85 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP------- 110 ++ V A + T+ A + ++ +++ +P + A R++P Sbjct: 86 IDAAVDDAFAGSPTLAGAQATLRRSEHELMAGAGVFYPQADAQAGASRQRYVPLRTGANL 145 Query: 111 -----NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NL T ST + ID++G +RR++E A D+ + + A+L + + ++ + Sbjct: 146 PASIFNLFTLST---TISYAIDIWGGERRNVEGLAAQADAQHHALAAARLTLAANVVNTM 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + + I++ +++ L + + L+ + + G ++ +++ L+A ++++ +P LE+ Sbjct: 203 IARAAYADEIAVTRELIALTDEQVRLTRAQVSAGTSAYTAVLALDAARAALDASLPALEQ 262 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 ++TL G YPA M ++ +P + +P++L+R RPDI Sbjct: 263 KIGQADDLLATLAGRYPAERVPPGMSLA------DIALPARLPQTVPSELVRRRPDILQA 316 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E L + A IG+A + L+PS++L S + + F WS G + P+F G Sbjct: 317 EAALHAASANIGVATAALFPSITLTASGSFNTVQLPSLFAAGGKAWSVGAGITAPLFRGG 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + A + E +++ VL+A +V + L +++ D + A+ + ++ Sbjct: 377 ALWYQRKAAIDAFDESSAAYRQVVLSAFAQVADTLRALDHDAAALEAQSRAMAAARDALR 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L I Y G L +L ++ + + A Q + V LY A+G G++ Sbjct: 437 LVTIEYETGAAGYLQVLAADQQYRQARLAWVQASAQRLQDTVALYAALGGGWD 489 >gi|171318840|ref|ZP_02907976.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171095939|gb|EDT40875.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 488 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 96/416 (23%), Positives = 196/416 (47%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F+D L++L+ L NL + ATER+ A+ + RA L P +++A+ + + P Sbjct: 57 FHDPVLDRLIATVLDGNLDLQAATERVKQAQALTVQKRAALLPELDATAHAADARQNTPP 116 Query: 112 ----LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ G L W D+FG +R + ++ A L D +L + + +Y+D Sbjct: 117 PLGYVRQAGIG-LALSWSPDVFGGERLDLLAAQAELVGQKHAEDAMRLALAADAASAYVD 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R ++ + I + + + L+ + G +++L + + + ++ ++E+ IP + Sbjct: 176 LRWAQQELKILQDNAAIRQHALALTRKRQAFGLSTELDVTRAQNQLDALEARIPPTQAQI 235 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ G + Q+ P P + P+ + RPD+ ++ Sbjct: 236 AHQLNLIAVYSGRTPESVDRLVLAQAGAIPAPPAGSPATL--PSQALLRRPDVLTAYAQV 293 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTH-------DNSFPGYNTHWSFGPKLYLPIF 335 A++G+AK++ YP SLN G +A ++ DN F + S PIF Sbjct: 294 ERRAAQVGVAKAERYPKFSLNLADGILAASYLGLPTLTDNLFSAALSATS-------PIF 346 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+I ++I ++ES +E + ++T+L A++EVE+A ++ + +L A+ K Sbjct: 347 NAGRITADITQSESRMRESELGLRQTMLQALREVEDARANLVSSDEATRRLDSALAASDK 406 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L+ Y+ G LD+L + + L+ +R+ A + V LY ++G G++ Sbjct: 407 ALGLANQLYKGGATDFLDVLSAQEVYLRDSDALNQVRREHALAAVALYRSLGGGWS 462 >gi|300691716|ref|YP_003752711.1| outer membrane protein [Ralstonia solanacearum PSI07] gi|299078776|emb|CBJ51436.1| putative outer membrane protein [Ralstonia solanacearum PSI07] Length = 521 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 105/474 (22%), Positives = 213/474 (44%), Gaps = 39/474 (8%) Query: 6 AIFSLFIVLLAGCT-VGPEY-----TKPHM----PLLPTQFSIGNSKNLINIDTLKWWES 55 A+ ++ + +LAGC +G + T P LP+Q S+N W + Sbjct: 34 ALSAIALAVLAGCADLGNAHSTQTLTSPGQLASAKTLPSQGGRWPSQN--------WVDQ 85 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF---- 108 FND L LV A+ + + A R+ A++ +VR DL+PS RF Sbjct: 86 FNDPQLRALVDEAIHDSPNLQVAFARVRASRAMADAVRGDLYPSVGLDAEMTRQRFSSYD 145 Query: 109 ----IP---NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 P N T S QL + +D +G+ R +ES+L++ + A+ A+L + + + Sbjct: 146 LFEGTPLGGNWITESKIQLGVSYDLDFWGKNRAALESALSDDQAMEAESQSARLMLSTSV 205 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +A + + ++ + LS + G +++ + A I + ++++ Sbjct: 206 ARTYVKLAALYAQRDVAERTIAQRRELVSLSGQRLRAGLDTQVETTQARANIAAAQTELE 265 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +++ + + ++ LLG L + + + QP +P ++ I DLI RPD+ Sbjct: 266 QVDEQIALARNQLAALLGKGPDRGL-AIARPTLLAQPTPKLPDHLTI--DLIGRRPDLVA 322 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 ++ + I +AK+ P +SL G ++ +N G GP L LPIF+ Sbjct: 323 ARWRVEAATKNIDVAKAQFLPDISLTAFLGLASIAPENLLLGNARQLGIGPALRLPIFEG 382 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 GK+++N+R + ++ +T+ A+ + + +TS++ + + A+ +++ Sbjct: 383 GKLRANLRGKYAGYDAAVASYNQTLTEALHDTADQITSLHSIDTQIDIQRTALAEAERAY 442 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL+ Y G + L +L+ E + ++ + + + + L A+G GY Sbjct: 443 SLARTRYGAGLGTQLTVLNAESTVLQQRRLAALLQARRLDAQMALIKALGGGYT 496 >gi|289165685|ref|YP_003455823.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|288858858|emb|CBJ12780.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 450 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 214/466 (45%), Gaps = 48/466 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK----NLINIDTLKWWESFNDTSLN 62 + L + L GC + +P +P +P ++ N++ + I++ + WW N+ LN Sbjct: 10 VLFLIGIFLQGC-FSSQQNQP-LPQVPNKWPQQNTQVKMDDRIDLPDMAWWRQLNNLELN 67 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTGQLD 121 +++++AL+ N + A + A+ + V+ + P + +PNL + L Sbjct: 68 QMIQLALRNNNNVHIAAANLQYAQAQLKQVKLNWIPGMSILSGYSQMPNLGDPGAFVALF 127 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 + +++ Q + ES+ ++++ D +L +I ++ SY +E I +L Sbjct: 128 PQYVLNIVQQIKQQESAKYQVEASSHAQDGIRLVLIGQVSASYFTLLAQREAQKIYQHLL 187 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D K I L ++ G SK + L +E+K +S + + HNI + Sbjct: 188 DDESKLISLYQSQYRAGLISKDKIDTLTSEMKQTQS-------QYVITQHNIVV-----S 235 Query: 242 TEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 LHY+ Q+ N + IP N+ PA ++RNRPD+R E KL + Sbjct: 236 QNTLHYLLNQNPGSLPFNVSFNQLKDLKIIPGNL--PATVLRNRPDVREAEAKLKAANVD 293 Query: 292 IGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IG+A ++L PS+ L+ + + N N + P + P+F I+ +++ Sbjct: 294 IGVAWANLLPSVRLDSLLGFSQISNGAFALNEAYMNTPAINPPVFGL------IQASQAR 347 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q Y + +TV A++EV+NAL++ + + K Q KK +L Y +G S Sbjct: 348 SQAIYYAYLDTVKKALQEVDNALSAYTAYSEQLLKNQSGFWDEKKRCALVDSRYNRGIVS 407 Query: 411 LLDILDIERATAKVEVD---LSIAKRQLAK--SYVDLYIAIGSGYN 451 L +++ + ++++D L I + +L K + V L+ +G GY+ Sbjct: 408 LSEVV-----SCQIKLDYFKLIINQNKLEKMLTLVVLFQDLGGGYH 448 >gi|270159514|ref|ZP_06188170.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|269987853|gb|EEZ94108.1| outer membrane efflux protein [Legionella longbeachae D-4968] Length = 466 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 214/466 (45%), Gaps = 48/466 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK----NLINIDTLKWWESFNDTSLN 62 + L + L GC + +P +P +P ++ N++ + I++ + WW N+ LN Sbjct: 26 VLFLIGIFLQGC-FSSQQNQP-LPQVPNKWPQQNTQVKMDDRIDLPDMAWWRQLNNLELN 83 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTGQLD 121 +++++AL+ N + A + A+ + V+ + P + +PNL + L Sbjct: 84 QMIQLALRNNNNVHIAAANLQYAQAQLKQVKLNWIPGMSILSGYSQMPNLGDPGAFVALF 143 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 + +++ Q + ES+ ++++ D +L +I ++ SY +E I +L Sbjct: 144 PQYVLNIVQQIKQQESAKYQVEASSHAQDGIRLVLIGQVSASYFTLLAQREAQKIYQHLL 203 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D K I L ++ G SK + L +E+K +S + + HNI + Sbjct: 204 DDESKLISLYQSQYRAGLISKDKIDTLTSEMKQTQSQ-------YVITQHNIVV-----S 251 Query: 242 TEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 LHY+ Q+ N + IP N+ PA ++RNRPD+R E KL + Sbjct: 252 QNTLHYLLNQNPGSLPFNVSFNQLKDLKIIPGNL--PATVLRNRPDVREAEAKLKAANVD 309 Query: 292 IGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IG+A ++L PS+ L+ + + N N + P + P+F I+ +++ Sbjct: 310 IGVAWANLLPSVRLDSLLGFSQISNGAFALNEAYMNTPAINPPVFGL------IQASQAR 363 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +Q Y + +TV A++EV+NAL++ + + K Q KK +L Y +G S Sbjct: 364 SQAIYYAYLDTVKKALQEVDNALSAYTAYSEQLLKNQSGFWDEKKRCALVDSRYNRGIVS 423 Query: 411 LLDILDIERATAKVEVD---LSIAKRQLAK--SYVDLYIAIGSGYN 451 L +++ + ++++D L I + +L K + V L+ +G GY+ Sbjct: 424 LSEVV-----SCQIKLDYFKLIINQNKLEKMLTLVVLFQDLGGGYH 464 >gi|327402401|ref|YP_004343239.1| NodT family RND efflux system outer membrane lipoprotein [Fluviicola taffensis DSM 16823] gi|327317909|gb|AEA42401.1| RND efflux system, outer membrane lipoprotein, NodT family [Fluviicola taffensis DSM 16823] Length = 466 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 115/484 (23%), Positives = 223/484 (46%), Gaps = 53/484 (10%) Query: 1 MNILRAI-FSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFN 57 MNI R I +LF +LL + C V Y +P + S++ ++ + W + F+ Sbjct: 1 MNINRKIVIALFALLLIVSSC-VTTRYERPDDVKSTELYRDNASEDTTSMADVAWDKLFS 59 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFI- 109 D L L++ L QNL + QA ERINA++ + + P S+ A S R + Sbjct: 60 DPQLRSLIERGLAQNLNLKQAVERINASQAYLKQSKMAFLPTLQLDITSTDAKQSQRAVN 119 Query: 110 --PNLKTNSTG----QLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIP 162 P L +T QL + W+ D++G+ R + +LA + + A + +I+ + Sbjct: 120 APPGLLQLTTHTNRLQLGTSWEADIWGKLRSAKRGALAGMLQSDASKRAIQTQLIADIAN 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNI-ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + F +++ I + +++ K+ + L+ L+ + G + +++ EA + E +P Sbjct: 180 AYYNLLAFDKQLKITQETIEIRKQQVLTLTALQES-GKVTSAEVLQSEANQYAAEVMVPD 238 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ + L+ Y + +++ + Q ++ + +G+ + L++NRPD++ Sbjct: 239 LQNK----IWQAENLMNYLLGQGPGKIERGELDTQV-IFADLRLGVSSQLLKNRPDVQAA 293 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL--------P 333 E + +AK+ YPSL+ LT + F + F L+ P Sbjct: 294 EYSFISAFENTNVAKTYFYPSLT------LTANGGFASFKIQEIFSKSLFYNIIGGLVQP 347 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-------DKKIVTKL 386 IF++G+ K+ +R A++ Q + +Q+ +L + EV NAL S K + L Sbjct: 348 IFNRGQNKARLRAAKAEQQVAFYNFQDVILKSGMEVSNALFSYQNATERELIRNKQIESL 407 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV+ ++ +S N + Y+ D+L E+ +++ K +S V+LY A+ Sbjct: 408 TTAVDNTRELLS----NRSETNYT--DVLSSEQNLIAAQMNGINDKLDQLQSVVNLYRAL 461 Query: 447 GSGY 450 G G+ Sbjct: 462 GGGW 465 >gi|317048064|ref|YP_004115712.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316949681|gb|ADU69156.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 475 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 104/474 (21%), Positives = 201/474 (42%), Gaps = 57/474 (12%) Query: 13 VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNL-----INIDTLKWWESFNDTSLNKLVK 66 LAGC ++ P+Y +P P+ T S ++L N + W E D L ++V Sbjct: 12 CFLAGCMSLDPDYKRPASPVATTTPSGDAYRSLQGAQAANYRDIGWQEYILDPQLRQVVA 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL--KTNST------- 117 +AL + + +A + +A R++LFP+ A +S L + N T Sbjct: 72 MALDSSRDLREAVASVKSAHAQYGEERSNLFPTISAGLSGTRSRALTGEGNQTAISNSYS 131 Query: 118 --GQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 G + S +++DLFG+ R E+ L+ L+ A + +L V+ + ++ Sbjct: 132 AEGSVSS-FELDLFGKNQSLTREQYETYLSTLEGARS----TRLTVLYNTVDYWLTLAAD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++IA + + ++++E++ + G S + + E +S +D+ + + Sbjct: 187 RSNLAIAKETAESARQSMEVTRKQMEHGTASMVDVSSAETTYQSAMADVASYTTDVAQDK 246 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI------------GIPADLIRNRPDI 278 + + ++G P+ +P NI GI +D + NRPD+ Sbjct: 247 NALDLVVGRSV---------------PDNLLPANIDALGQAFREVPAGISSDALLNRPDV 291 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 E L + A IG A+++ +PS+SL S + + F WSF P + LPIF Sbjct: 292 LEAEHNLKSANASIGAARANFFPSISLTASGGVGSSDLSSLFKNGAGIWSFAPSISLPIF 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G S ++ ++ + +++ V A +EV +AL +T ++ V + Sbjct: 352 SGGYNVSYLKYTKAQKEYYVAAYEKAVQTAFQEVADALARRGTINDQLTSQRNNVAASQT 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + YR G + L+ L +R L ++ ++ + Y +G G Sbjct: 412 YYHLADLRYRNGIDTYLNALTAQRTLYTARTSLVSTQQAYYQNLITFYKVMGGG 465 >gi|237654182|ref|YP_002890496.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] gi|237625429|gb|ACR02119.1| RND efflux system, outer membrane lipoprotein, NodT family [Thauera sp. MZ1T] Length = 471 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 191/415 (46%), Gaps = 23/415 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI 109 WW+ F L+ V AL + ER+ A+ + A L PS S R + Sbjct: 59 WWQDFGSARLDAFVTEALATTPDLRIQAERVVQAELALRQAGASLLPSLDVSGGSSTRNV 118 Query: 110 PNLKTNSTG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + +++STG L + ++IDL+G+ + +S A L + D A+L++ + + ++ Sbjct: 119 DSNESSSTGIDLGASYEIDLWGRIAAGVGASRAGLMATRFDYDAARLSISASVAIAWFQV 178 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +ER+ IA + L ++ + + ++ GA S L L + + + I LE R Sbjct: 179 LALQERLDIARRNLATAERVLRVVQARYDNGAASALDLSQQRTTVLNQRKAIEPLEVQLR 238 Query: 228 MNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 ++ LLG P + +++ L +P + G+P++L+ RPD+ Sbjct: 239 QTRSALAILLGRNPQAGPTPDGAGGIERLGA-----LKVPAVGAGLPSELLLRRPDLAAS 293 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +L + A I A++ L P +SL+ GS AL + S + IFD Sbjct: 294 EARLVAAAANIAAARAALLPGISLSAGAGVGSAALL---ALADTTRTLSISASVLQKIFD 350 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++++++ S +E + + +L A+KEVE+ L + D + + ++S Sbjct: 351 GGRLRADVDIQRSRQRELVESHRRAILAALKEVEDVLANGVRDTNQEAAEREILAEAERS 410 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ + YR+G LL +L +R + L++ + + V+LY A+G G++ Sbjct: 411 LRLAELRYREGADGLLTVLLAQRTLFASQDQLALTRLARLTAAVNLYKALGGGWS 465 >gi|229515775|ref|ZP_04405234.1| hypothetical protein VCB_003433 [Vibrio cholerae TMA 21] gi|229347544|gb|EEO12504.1| hypothetical protein VCB_003433 [Vibrio cholerae TMA 21] Length = 484 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 214/443 (48%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ ++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGTQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G + ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATYLDVLVAEES 449 >gi|309779663|ref|ZP_07674422.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] gi|308921604|gb|EFP67242.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] Length = 482 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/444 (22%), Positives = 191/444 (43%), Gaps = 60/444 (13%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINI 47 A+ + ++ L C++ P P P + QF +G + Sbjct: 4 ALVATSVLALTACSLAPIAVPPATPSPDHYGVTSQPAKTVEAAGVAQQFDVGAAP----- 58 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS--SYASI 104 +WW+ + +LN LV+ L+ N T+ + ++AA+E + + V A PS + A Sbjct: 59 -VPQWWKLYRSDALNALVEEGLRNNPTLAATQKTLSAAQEELRAQVGASTLPSLDAGAQA 117 Query: 105 SHRFIPNLKTNS---------TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKL 154 + + PNL GQL + + DLFG R+ +S A +D +++ A+ Sbjct: 118 ARQRTPNLTGVGPEALRYNVFVGQLQAHYTFDLFGATRYANAASAARVDVRGCELEAARR 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + ++ + I+A ++I++ +++ + S ++ GA S + S Sbjct: 178 ALAANIVGAVINAAALDQQIALTERLVVVADATARDSQRRYELGALSHAQALASTQSAAS 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-----YPAT-EFLHYMQKQSNNFQPNLYIP--INIG 266 + + +P L + +++H ++ LLG PA EF +L +P + + Sbjct: 238 LAATLPQLRQQRAVSIHALAVLLGRTPDAAPAVPEF------------SSLSLPNQVPVA 285 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 +P+DL+R RPDIR + + A G A + L+PSLSL S+ L+ G Sbjct: 286 VPSDLLRARPDIRAAAAAVRAASADAGEATAQLFPSLSLTASLGRGGLSWPALLSGAGGL 345 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+ G L PIF G + ++ R + ++ VL+A + V + L ++ D + + Sbjct: 346 WAVGAGLSQPIFHGGALMAHRRATLELYDATVLQYKSAVLSAFENVADTLAALENDAQTL 405 Query: 384 TKLQHAVELHKKSMSLSMINYRQG 407 + A + + + + R G Sbjct: 406 ASAEVASTAARTAFNETASRRRLG 429 >gi|58038866|ref|YP_190830.1| putative outer membrane channel protein [Gluconobacter oxydans 621H] gi|58001280|gb|AAW60174.1| Putative outer membrane channel protein [Gluconobacter oxydans 621H] Length = 489 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 104/438 (23%), Positives = 196/438 (44%), Gaps = 31/438 (7%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 +GN++ + WW FND L+ L K L N + A E A++ + L+ Sbjct: 1 MGNAQPADGVVRSDWWTMFNDPILDGLEKRMLAVNPDLQAAAEAFTQARDVARETESRLY 60 Query: 98 P--SSYASISH------RFIPNLKTNSTGQLDSD--------WKIDLFGQRRHIESSLAN 141 P + A +S R N T+S+ +S+ W+ D + R+ N Sbjct: 61 PQVTGAAHMSDNKGSLGRLYNNPATSSSLVYESNQAYSGAATWEPDFWNSIRNTTRMQKN 120 Query: 142 LDSAYA-QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 L A A Q +A+L++ ++L YI R + ++ + ++ +E++ L+ Sbjct: 121 LAQASAGQYALARLSLEAELASDYIALRGLDAQNAVYDDSIRYFRAAVEITELRQAGSIG 180 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNL 259 + L + + E ++ S ++ L + H I+ LL PA + ++ +F Sbjct: 181 AGLDVSRAETQLYSAQAGKSNLIARRNVMEHAIAVLLNTAPAGFHIAPVKDVKMHFG--- 237 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 + IN G+PA L+ RPDI E+++A S IG++++ YP ++ + D F Sbjct: 238 VVKINAGLPASLLERRPDIAIAERQMAASARAIGVSRAAFYPHITFSAEGGF-EDGGFDL 296 Query: 320 YN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + W + P F G ++ ++R+ S + ++ VL+A ++VE+ LT Sbjct: 297 ASISRAFWKIAVQAVEPAFTGGLRRAALQRSWSQYRSMVDNYRSVVLSAFQDVEDGLTQT 356 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK---VEVDLSIAKR 433 + K + Q AV+ ++ S++M Y G + LD L ++ + EV++ A+ Sbjct: 357 RQFKIAQDQQQKAVDAALRTQSMTMALYTGGLSNYLDALVAQQDALQARLAEVEVQTAQV 416 Query: 434 QLAKSYVDLYIAIGSGYN 451 Q S V L A+G G++ Sbjct: 417 Q---SSVRLVRALGGGWS 431 >gi|255532839|ref|YP_003093211.1| NodT family RND efflux system outer membrane lipoprotein [Pedobacter heparinus DSM 2366] gi|255345823|gb|ACU05149.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter heparinus DSM 2366] Length = 477 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 107/478 (22%), Positives = 211/478 (44%), Gaps = 48/478 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLKWWESFNDTSLNKLVK 66 +I +L C P + S+ GNS + +N+ T W F D L L+ Sbjct: 9 YIAVLGICLAAASCKLPAVTQRAENRSVPVSYGNSLDTVNVATAAWRNFFTDKDLQHLID 68 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------------------- 105 AL +N +L + I AK +I S + L P+ I Sbjct: 69 TALMRNQELLITLQEIEIAKNDIRSRQGQLLPAVNGKIGAGIEKVGRYTSQGAGDASTEI 128 Query: 106 --HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIP 162 + +P+ + T L ++W+ D++ + + + ++++ S + N+I+++ Sbjct: 129 APGKEMPDPLMDYTAVLTANWEADIWKKLHNAKKAAVSRYLSTIEGKNFVLSNLIAEVAN 188 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDI 219 SY + ++ I Q ++L K +E+ ++ ++L++ K +AE+ + +E DI Sbjct: 189 SYYELLALDNQLEIVKQNIELQKNALEIVKIQKEATRVTELAVQKFKAEVLNSQGLEFDI 248 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 L+K + I+ LLG YP +Q+ N+F + ++ GIP+ L+ NRPD+ Sbjct: 249 --LQKITETE-NRINFLLGRYP-----QPIQRDKNSFLTLMPTAVSTGIPSQLLANRPDV 300 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLYL 332 + E +LA + + +A+++ YPS + S AL P Y + +S L Sbjct: 301 KKAELELAAAKLDVKVARAEFYPSFGI--SAALGFQAFKPSYLVKFPESVLYSLAGDLAG 358 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ ++ IK+ A + + ++ T+LNA EV L+ I+ +K V+ Sbjct: 359 PLINRKGIKAEFYNANARQLQAMYNYERTILNAYLEVSAQLSKISNLEKSYDLKSKEVKA 418 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S+ +S ++ R L++L +R +++L K+ + ++Y +G G+ Sbjct: 419 LSSSIDISNDLFKSARADYLEVLMTQRDALAAKLELIETKKGQLNAVTNIYRDLGGGW 476 >gi|120554181|ref|YP_958532.1| RND efflux system outer membrane lipoprotein [Marinobacter aquaeolei VT8] gi|120324030|gb|ABM18345.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter aquaeolei VT8] Length = 495 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 116/482 (24%), Positives = 211/482 (43%), Gaps = 50/482 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLIN---ID 48 + L LAGC GP++ +P P + PTQF G ++ L+ I+ Sbjct: 23 VAGLVTAGLAGCAAGPDFQRPTAPDVARYTATPVADRTVSAPTQF--GETQRLVEGLPIE 80 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSV 92 T +WW+S ++L+ L+ A + T+ + + A+E + S Sbjct: 81 T-QWWQSLGSSALDGLINEAFHVSPTLASISANLRQAQELLAAQAGSTQYPQVDVALGSQ 139 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDI 151 R + PSS +L S G + +DL G RR +E+ A D +++ Sbjct: 140 RQQMSPSSQGLSGDARQFSLYNASVG---VHYNLDLAGGNRRALEALAARADYRRFELNA 196 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + + I ++ IL + + + L+H + G S + L+A+ Sbjct: 197 ARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQ 256 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +++P L K + H ++ L G P T + +F L + + + +P++ Sbjct: 257 AEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTL--ADF--TLPVEMPLVVPSE 312 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI+ E L + A G+A + LYP ++L+ GS ALT F G + W Sbjct: 313 LVRRRPDIQASEALLHAANADYGVAVAKLYPQINLSANLGSQALTTGALFGGGSAVWGLV 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL +++ V + L ++ D + +T L Sbjct: 373 AQLTQPLFNPG-LPAEKRAALAAFDAAVANYQSVVLESLRNVADTLRAVESDAQTLTALA 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + S+ YR G S L +L ++ + +++ + Q V LY A+G Sbjct: 432 AADMAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAVQAQRLVDSVALYQALG 491 Query: 448 SG 449 G Sbjct: 492 GG 493 >gi|187478948|ref|YP_786972.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] gi|115423534|emb|CAJ50070.1| multidrug efflux system outer membrane protein [Bordetella avium 197N] Length = 508 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 108/482 (22%), Positives = 212/482 (43%), Gaps = 61/482 (12%) Query: 18 CTVGPEYTKPHMPL---LPTQFSI-----------GNS-------KNLINIDTLKWWESF 56 C++ P+Y +P P+ P Q I G+ ++ + + W F Sbjct: 22 CSLAPDYHRPQAPVSANWPDQPKIHYGAYSRPSELGSQPAAAVAPQSGVAAADIGWRNVF 81 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP-NLK 113 D L L+ +AL + + A R+ A+ R +PS A + + +P N++ Sbjct: 82 LDPRLQALIGLALNNSRDLRVAVLRVEEARAQYGIQRGAQWPSIGVGAQGTRQHLPRNMR 141 Query: 114 TNS-----------TGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 G + ++IDLFG+ R + + L + AQ + ++ ++ + Sbjct: 142 AGGPDSSSISSQYQAGIGLTTFEIDLFGRLRSLSEAAYQQYLSTEQAQRAV-QITLVGAV 200 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + R + ++ + + L +++ L +F G S+L L + ++ + S +D+ Sbjct: 201 AQAYFNLRAAEVQLDLVRKTLQSRQESYNLVKTRFDGGVASELDLNQAKSLLDSASADLA 260 Query: 221 TLEKSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 L +S + ++ LLG PA + + + + + G+P+DL+ RPD Sbjct: 261 QLARSQAQATNALTVLLGVATLPAD-----LPAPAPFGRDQMLATVPAGLPSDLLERRPD 315 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPI 334 I E +L + A IG A++ +P++SL G + N F G +WSF P+L +P+ Sbjct: 316 ILAAEHQLLSANANIGAARAAFFPTISLTGLLGAASPSLGNLFKGGQGYWSFSPQLSMPL 375 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G I + A++ +++T+ A +EV +AL + Q +E Sbjct: 376 FSGGSIVEGLNLAKARDNIAVAQYEQTIQQAFREVSDALAG-EATYSAQLEAQRGLEASS 434 Query: 395 -KSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK--SYVDLYIAIGS 448 +++ LS + Y G S L + T++V+ +++ + LA + V+LY A+G Sbjct: 435 ARTLELSNLRYVNGVDSYLQV-----QTSQVDFFNAQIALVQTGLASLINRVELYKALGG 489 Query: 449 GY 450 G+ Sbjct: 490 GW 491 >gi|319794105|ref|YP_004155745.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315596568|gb|ADU37634.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 504 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 118/488 (24%), Positives = 202/488 (41%), Gaps = 43/488 (8%) Query: 1 MNILRAIFSLFIVL-----LAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWW 53 M LR I SL + L L GC + K P P Q++ + + +L ++ WW Sbjct: 1 MRRLRPIASLCLPLALSLALVGCGLTRPPAKVEAPF-PPQWNAPLPHGGSLASL--ADWW 57 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRF--- 108 +D L +L+ A + + A R+ A+ + A L PS AS S Sbjct: 58 RQLDDPLLVELIAAAENASPNLASAAARVAEARSTRVQAGAALLPSLDGTASASRGVSGS 117 Query: 109 --------------------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYA 147 L T G L S W+IDLFG+ R +S+ LDSA A Sbjct: 118 SFSGGGASSSSSGSSSAAAATAPLTTLQAG-LQSKWEIDLFGRLRADRDSAQQKLDSATA 176 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + A++ V ++ +Y R ++++ ++ + L+ L G T+ Sbjct: 177 KWHDARVAVAAETANAYFAERACRQQLRVSESDAKSRSETSRLTDLSAGAGFTAPADAAL 236 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-G 266 A + + + L G + ++ Q L + I Sbjct: 237 ARASASDASGRLTQQRAQCAIQRKALVALSGIDEPTLAQKLA--VSHTQRALVVMGGIES 294 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHW 324 +PA + RPD+ E +A + A +G A+++ YP LS++GSI T + F W Sbjct: 295 VPAQALSQRPDVYAAELAVASASADVGSAEAERYPKLSISGSIGRTQIRTSGFRESLETW 354 Query: 325 SFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + GP L +P+FD G +N A++ E ++ V A++EVE AL +++ + Sbjct: 355 TVGPVSLTVPLFDFGARTANTNAAKARYAEAVSLYRANVRQAVREVEEALVNLDATEART 414 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 T AV+ ++ S + Y G SL ++ D R + +R+ A+++V LY Sbjct: 415 TDADSAVKNYQASFDATQARYSSGLASLFELEDSRRTLFAAQTARVTLQRERAEAWVSLY 474 Query: 444 IAIGSGYN 451 ++G G+N Sbjct: 475 RSMGGGWN 482 >gi|295700435|ref|YP_003608328.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295439648|gb|ADG18817.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 537 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 183/418 (43%), Gaps = 34/418 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQN 72 GC VGP+Y +P + +P +S G ++ N K WW +FND +++L + N Sbjct: 34 GCMVGPDYHRPQV-RVPASYSELPGWTQAEPNATGPKGTWWTAFNDPLIDELEPLVAVSN 92 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS--------------HRFIPNLKTN--S 116 T+ A + + + LFP+ A+ S F+ T + Sbjct: 93 QTVRADYANYQQALAEVRAAHSALFPTIGATGSATRERAGSGSVSASGSFVNGTSTRIVN 152 Query: 117 TGQLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +G L+ W DL+GQ RR +E + A+ S+ A + A L+ L + I+ R Sbjct: 153 SGSLEGSVSWAPDLWGQVRRTVEENAASAQSSEATLANATLSEQVALATAIIELRTSDAN 212 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I + Q + Y+ +++ + G ++ +++ + +SD+ L + H I Sbjct: 213 IDLLQQTVVAYQHFLDVVTEQDRAGTIPPSDVITARSQLNTAKSDLIALGVARAQQAHAI 272 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+G E L + P+ + +G+P+ L+ RPDI E+K+A A IG Sbjct: 273 AVLVGKNPEE-LSVTHSTAMPALPS----VPVGVPSTLLERRPDIAAAERKMAAQNAAIG 327 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 + + YP +SL+ + T + G N WS G +FD G +++ A++ Sbjct: 328 VEVAAYYPDISLSAAAGFTQ-SPLSGLLKVANYVWSLGGSATQTLFDGGLRSADVDAAKA 386 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + ++ TVL A + VE+ L+ + + L+ AV + + ++ Y+ G Sbjct: 387 AYDSAVANYRGTVLGAFQNVEDDLSGLRILAEQAVVLETAVRDADRGVEIAFNEYQAG 444 >gi|295678187|ref|YP_003606711.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295438030|gb|ADG17200.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 531 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 107/462 (23%), Positives = 198/462 (42%), Gaps = 43/462 (9%) Query: 21 GPEYTKPHMPLLPTQFSIGN-----SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GP Y +P + P F ++ D WW + D LN+L N TI Sbjct: 35 GPNYQRPATEI-PASFKEAAPGWKVAEPADQHDRGDWWAIYEDPKLNELEDKLNAANQTI 93 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG----------------- 118 Q A+ + RA FP AS N T + G Sbjct: 94 AQFAANYRQARALVGEARAAYFPIIGASAGATRSGN-GTQTGGNATTATSREGINNSFNV 152 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 Q+ + W+ DL+G R + + A A A + A+L+ + L +Y R + Sbjct: 153 QMTASWEPDLWGSVTRSVNAQKAGQQGAAADLANARLSAQATLAQTYFLLRALDSTQKLL 212 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + Y+++++L+ ++ G ++ +++ + +++S ++ + H I+ L+ Sbjct: 213 DDTVLAYQRSLQLTQNQYAAGVAARSDVIQAQTQLQSAQAAAIDNGIQRAQDEHAIAVLI 272 Query: 238 GYPATEF-LHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G PA+ F L M P P + +P+ L+ RPDI E+K A + +IG+ Sbjct: 273 GVPASMFSLPPM--------PLTATPPAVPAQMPSALLERRPDIASAERKAAAANEQIGV 324 Query: 295 AKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A + +PSL+L+ + + S P + W+ GP+L IFD G K+ A + Sbjct: 325 AIAAFFPSLTLSATGGFENSVFSQLLSLP--SRFWTLGPQLAGTIFDAGLRKAQTEAARA 382 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + T+++TVL A ++VE+ L S+ ++ + + AV+ ++++++ Y+ G Sbjct: 383 TYDADVATYRQTVLAAFQDVEDNLASLRILEQEIVVQRQAVDSARQALAIVTNEYKAGTV 442 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L + E L Q S V L A+G G++ Sbjct: 443 GFVNVLTAQTTAFTAEQKLENIAGQRMVSSVGLVKALGGGWD 484 >gi|183222734|ref|YP_001840730.1| ABC transporter outer membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912766|ref|YP_001964321.1| TolC-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777442|gb|ABZ95743.1| TolC related protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781156|gb|ABZ99454.1| Putative ABC-type transport sytem, outer membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 475 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 110/468 (23%), Positives = 217/468 (46%), Gaps = 29/468 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPL-LPTQF-SIGNSKNLINIDTLKWWESFNDTSL 61 ++ I FIVL + Y + L LP QF + +S+ I + T W + FN+ L Sbjct: 1 MKRIIITFIVLWNISCIPALYERDKEDLQLPEQFQNWESSEKAIKLQTEIWNQFFNEPQL 60 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASIS----HRF-IPNLKT 114 L++IA++ N + + I+ A + + + + P S A + RF PN + Sbjct: 61 ISLIEIAIKNNQELEVLEQEISIANNEVFARQGEYLPKLSLQADVGSEQKERFSTPNANS 120 Query: 115 NST---GQLDSDWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNVISKLIPSYID 166 + G L W+ID++ + R+ S LA+++ V N+++++ +Y + Sbjct: 121 PTLFAHGGLVMSWEIDIWKKLRNATKSAYLRYLASIEGKRFVVT----NLVAEISDTYFE 176 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + ++++ +++ + E+ L+ G T+ L++ + EAE+ + + + Sbjct: 177 LKALDNQLTLIQNYIEVLSQVKEIVVLQREAGRTTSLAVKRFEAEVSKNLARKYDIVQRI 236 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + ++ LLG F + + S++F I +P DL+ NRPDI+ L Sbjct: 237 AITENRLNFLLG----RFPEKINRTSDDFLEITLPEIQKSVPIDLLENRPDIKQATLILE 292 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPG--YNTHWSFGPKLYLPIFDKGKIKS 342 I +A++ YPSLS++G+I NS F G + + G + P+ ++ I++ Sbjct: 293 SRKLDIEVARARFYPSLSIDGNIGYEVFNSKHFKGTPVSLAYGLGGGIIAPLINRKAIEA 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N A + + ++ ++L A EV N + I + V+ K+S+ +S I Sbjct: 353 NYATANNLQIQAVYNYEVSLLKAFTEVTNQIVKIKNLSQKFEAKNKQVQNLKESVEISNI 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ GR +D+L +R + +V+ K L +S + LY A+G G+ Sbjct: 413 LFKAGRIDYIDVLFSQRDFLEAQVEAFELKYSLLESNIGLYKALGGGW 460 >gi|329956759|ref|ZP_08297332.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] gi|328524131|gb|EGF51207.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] Length = 470 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 105/425 (24%), Positives = 196/425 (46%), Gaps = 39/425 (9%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 +I +L W E F D+ L L++ ALQ N +L A +RI A+ + S + PS Sbjct: 62 SIASLSWRELFTDSHLQTLIEHALQSNTDLLSAQQRIKEAEATLSSAKLAYLPSFMLTPQ 121 Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNV 156 +S TG + W+ID+FG+ RR L +L+ Y Q ++ Sbjct: 122 GGVSSFDKSKGSWTYTGIASASWEIDIFGKLTNAKRRSKALYLQSLE--YEQA--VSTSL 177 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ + Y E+ I+ + +++++ G T++ S+ + EA + +E Sbjct: 178 IANVANLYYTLLMLDEQYRISEETAVNWRESVRTMRAMMAAGMTNEASVSQSEANCRQVE 237 Query: 217 SDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + L++ + +++S LLG P ++ Q +F L +G+P L+ R Sbjct: 238 ASLLDLKQQIKEVENSLSILLGEVPGGIERGHLAGQ--DFPEEL----TVGVPLQLLSRR 291 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLY 331 PD++ E LA + A+S YPS++L+G+ T+ PG + G L Sbjct: 292 PDVKSAELSLASAFYSTNAARSAFYPSITLSGTAGWTNSAGNMIINPGKLLLSAVGA-LT 350 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK-------KIVT 384 P+F+KG + ++ A++ +E + +Q+ +LNA EV NALT + + +T Sbjct: 351 QPLFNKGLNIAQLKIAKAQQEEAKLAFQQALLNAGSEVNNALTQVQTARGKTELRTGQIT 410 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L++AV +S L M + G + L++L +++ ++ + + ++LY Sbjct: 411 SLENAV----RSTQLLM---QHGTSTYLEVLTAQQSLLSAQLTQVADRFDEIQGIINLYQ 463 Query: 445 AIGSG 449 A+G G Sbjct: 464 ALGGG 468 >gi|270157067|ref|ZP_06185724.1| RND efflux system NodT family protein [Legionella longbeachae D-4968] gi|289164520|ref|YP_003454658.1| outer membrane efflux lipoprotein [Legionella longbeachae NSW150] gi|269989092|gb|EEZ95346.1| RND efflux system NodT family protein [Legionella longbeachae D-4968] gi|288857693|emb|CBJ11536.1| putative outer membrane efflux lipoprotein [Legionella longbeachae NSW150] Length = 486 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/487 (25%), Positives = 215/487 (44%), Gaps = 49/487 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTK--PHMPLLPTQ-------------FSIGNSKNLI 45 M ++R I L + LA CT+ K H+ +P+ FS G N Sbjct: 1 MWLIRGIACLSLYALASCTISLPQQKQVEHIKAVPSMEHAIKKSLQKKKVFSQGQWPNK- 59 Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-- 103 +WW S+N LN+LV AL N +I + +RI AK+ + R+ LFP + + Sbjct: 60 -----QWWLSYNSPELNRLVTEALGYNPSIQEVKKRIEVAKQQAIVTRSVLFPLVFFNAD 114 Query: 104 -----ISHR-----FIPNLKTNST---GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQV 149 ISH F P+ N+ L +++ID +GQ R++ ++L + A+ Sbjct: 115 ENRQYISHNGLYRAFNPSFPLNANLLDLSLSFNYEIDFWGQNRNLFRAALGEAKAQEAEA 174 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +L + +Y + R + Q++ + +K +L +L +G +SKL ++ Sbjct: 175 AEVELITSTATAQAYFAYKTNLIRKELYVQLISVRQKIAKLQNLLVQKGLSSKLPALETS 234 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--I 267 ++ + + ++ N H I+TL G L N+ P+L +NI + Sbjct: 235 EKLLEAKKLLSSITDELTANKHLINTLTGRGPDSPLSI-----NSSLPSLPKALNIPQIL 289 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHW 324 P D + RPD+ Q + K G A ++ YP+++L G + L F + Sbjct: 290 PLDFLARRPDLMAQIWRAKALAYKTGAAMAEYYPNINLVGLLGLESTGWKKLFDISSGTA 349 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 +F P L LPIF G I++NI+ +++ + +L + +EV + L + + Sbjct: 350 AFRPALSLPIFTAGAIRANIKASKAQFDAAIDAYNNLILYSTQEVLDVLAFAEDIYQQKV 409 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDI-ERATAKVEVDLSIAKRQLAKSYVDLY 443 + + VEL + LS + ++G SL D+ + E K VD+++ Q S + L Sbjct: 410 EQERVVELANQRYELSSLRQKKGLDSLFDLYFLQEEVIQKRIVDVTLLYNQYLAS-IKLT 468 Query: 444 IAIGSGY 450 A+G GY Sbjct: 469 KALGGGY 475 >gi|93006583|ref|YP_581020.1| RND efflux system, outer membrane lipoprotein, NodT [Psychrobacter cryohalolentis K5] gi|92394261|gb|ABE75536.1| RND efflux system, outer membrane lipoprotein, NodT [Psychrobacter cryohalolentis K5] Length = 600 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 102/459 (22%), Positives = 213/459 (46%), Gaps = 29/459 (6%) Query: 15 LAGCTVGPEY-TKP--HMPLLPTQFSIG-------NSKNLINIDTLKWWESFNDTSLNKL 64 +A C P+ T+P +P +P + + G +S ++ + +W ++D L L Sbjct: 39 MAACNTIPKADTRPVLAVPNIPIEQTYGAFDKETVSSAEQASLASQRWQNFYSDERLKGL 98 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQ 119 + + L+ N A I A+ + P + Y+ R N Sbjct: 99 IALGLENNKDFESARLAIEKARAQYQITDINDLPRIDGNAGYSRTRQRGQTGDNYNVNLG 158 Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L +++++D +G+ + + +L N S A D ++++IS + SY + + ++ +A Sbjct: 159 L-ANYELDFWGKIASLKDQALQNFLSTTAAKDATQISLISNIAQSYANLSYSLAQLQLAE 217 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ +K++ ++ +F G KL ++ A +++ + + S + + + L+G Sbjct: 218 ATVESREKSLFIASKRFEAGIDPKLPSLQSSASLENARLAVLRAQSSILKSRNALQFLVG 277 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P L SN ++ + G+P++L+R RPD+ E L + A I +A++ Sbjct: 278 GPIPTNLIPTPAVSNITSQQVF---SAGLPSELLRYRPDVLQAEYNLKAAGANIEVARAS 334 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPS+SL +I L+ ++ F + WSFGP + +PIFD G++ +N A+ ++ Sbjct: 335 YYPSISLASNIGLSSGSLNDLFKSGSVGWSFGPSVSVPIFDAGRLDANYDVAQIERKQTL 394 Query: 356 ITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++ ++ A +EV + L ++ E + +LQ E ++ ++ ++ G + L Sbjct: 395 AGYERSIQTAFREVSDVLATRATLGEQLEGQYRLQDNFE---QTYQIADARFKAGISNYL 451 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 D+LD +R+ + + + Q S V+LY +G G N Sbjct: 452 DVLDAQRSLFSTQQGILDLELQKIISQVELYQVLGGGAN 490 >gi|315179757|gb|ADT86671.1| multidrug resistance protein [Vibrio furnissii NCTC 11218] Length = 484 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 103/437 (23%), Positives = 201/437 (45%), Gaps = 36/437 (8%) Query: 10 LFIVLLAGCTVGPEY-----TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 L ++LAGC+ P + T L +Q + N + + + WWE + D LN+L Sbjct: 23 LSTLILAGCST-PNHSSELGTVADAADLQSQQTFANHAEM-DWPSDHWWERYQDAQLNQL 80 Query: 65 VKIALQQNLTILQATERINAAKE------NILSVRADLFPSSYAS-ISHRF---IPNLKT 114 + A Q+ T+ A R+ A+ SV L S+ S +S+++ +P Sbjct: 81 INEAFAQSPTLQIAMARMKNAQGIAQQAGAARSVNVGLSASATESKVSYQYQAAMPPHGW 140 Query: 115 NSTGQL--DSDWKIDLFGQRRHIESSLANLDSAYAQVDI-AKLNVISKLIPSYID-ARHF 170 N G L + + D +G+ R ++ + +A + A+L + + + +Y + AR + Sbjct: 141 NDYGSLTLNFQYDFDFWGKNRAAVAAATSELAAAEAEGVSARLMLATSIANAYAELARLY 200 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++ LD+ K +EL ++ G + S+ + A S+E+++ L +S ++ Sbjct: 201 ANQHTV-EAALDVRNKTVELLQKRYENGLETLGSVSQARAIAASVEAELLGLNESIQLQK 259 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRYQEKKLA 286 + ++ L G L + P + + G+P D L+ +R DI + Sbjct: 260 NALAALAGQGPDRALTIQE-------PQVALNARYGLPTDAGIGLLGHRADITAARWRAE 312 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + ++GIA++ YP ++L+ G A DN F N GP +YLP+F G++ Sbjct: 313 AAAQRVGIAEAQFYPDVTLSAFIGYQAFGLDNLFNSGNDAGGIGPAIYLPLFTGGRLDGQ 372 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++S QE + T+ A+ +V + +TS + K + AVE ++++ ++ Sbjct: 373 LTSAQASYQEAVGGYNATLTQALHDVADVITSTKALDMRIAKTEEAVEQAQRALQIASNR 432 Query: 404 YRQGRYSLLDILDIERA 420 Y+ G + LD+L E + Sbjct: 433 YQGGLATYLDVLVAEES 449 >gi|116694733|ref|YP_728944.1| outer membrane efflux protein [Ralstonia eutropha H16] gi|113529232|emb|CAJ95579.1| outer membrane efflux protein [Ralstonia eutropha H16] Length = 607 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 98/481 (20%), Positives = 208/481 (43%), Gaps = 43/481 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----------------LKWWE 54 ++ LA CT+ P+Y +P P+ P+ + G + L W + Sbjct: 21 LVLALAACTLEPQYQRPDAPV-PSAWPEGAAYRTPQAGAAQPGQPAQPAGPSAADLGWRD 79 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI-- 109 F D L +L+++AL N + AT I+ A+ RA FP+ + +S R Sbjct: 80 VFVDPQLRQLIELALANNRDLRMATLAIDEARALYQIERAAQFPTVEGNAGMVSQRLPQR 139 Query: 110 -------PNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLI 161 P + T + G + +++D FG+ R ++ ++L + A+++++S++ Sbjct: 140 LRAAGQSPQITTYNAGIGFTAFELDFFGRVRSLKHAALEEYMATEEARRSAQISLVSEVA 199 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ + + ++ L + E+ GA ++L + + ++++ + + Sbjct: 200 NAYLTLLADRALLKLSQDTLKTQQDAAEMVRRGRQVGAMAQLDQHRAQTQVQTSQVGVEQ 259 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI---------GIPADLI 272 + + + +S L+G P + + + N P++ G+P+ ++ Sbjct: 260 YTRQVAQDENALSLLIGGPLPKSVTDAGAATANANAAARDPLDARTLVSEFPEGLPSSVL 319 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPK 329 RPDI E +L + A IG A++ +P +SL G++ + +S G W F P+ Sbjct: 320 VRRPDILNAEHRLKAANANIGAARAAFFPRISLTGALGVAS-SSLAGLFSGGMAWVFAPQ 378 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +PIFD G+ ++ + A +++T+ A +EV +++ + ++ V + Sbjct: 379 LTVPIFDAGRNRAGLDAANVRKDINIANYEKTIQTAFREVADSMAARATYERQVQAQEAL 438 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V ++ LS + ++ G + D +R + L K S V LY ++G G Sbjct: 439 VREGSETRRLSEMRFKNGVDDYFGVFDAQRQLYTAQQALITYKLAGLTSRVSLYKSLGGG 498 Query: 450 Y 450 + Sbjct: 499 W 499 >gi|104782683|ref|YP_609181.1| RND family multidrug efflux outer membrane protein [Pseudomonas entomophila L48] gi|95111670|emb|CAK16391.1| putative multidrug efflux outer membrane protein, RND family [Pseudomonas entomophila L48] Length = 467 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 101/424 (23%), Positives = 194/424 (45%), Gaps = 32/424 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F L++LV+ A Q + + A R+ A+ + + A L P + + Sbjct: 49 QWWQAFASNELDRLVERARQNSHDLAAAAARVRQAQASAVIAGAPLLPEVQSGLDGSRQR 108 Query: 111 NLKTNSTGQLDSD----------------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAK 153 L+ QLD+ ++ID +G R +S+L NLD++ + Sbjct: 109 LLRGEGNDQLDASSRERTSTSFGARLSASYEIDFWGGLRAARDSALRNLDASRFDRQTVE 168 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L ++ + SY+ +E++ IA L+ + + L + G+ ++L L + + + Sbjct: 169 LTLVGAVADSYLQGLALEEQLRIARLNLENARDVLGLVEARERSGSATRLELAQQRSLVA 228 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + E +P LE+ + N ++TLLG P + + + + I G+P++L+ Sbjct: 229 AQERQVPLLEQRRQDNRVTLATLLGEP----VQALPTSAETIDALRWPGIGSGVPSELLG 284 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPDI E +LA + A + +A++ + P L L GS A T N G + +++ L Sbjct: 285 RRPDIAAAEARLAAASANVQVARAAMLPRLVLGATLGSGARTFANL--GDSPYYTLTAGL 342 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF+ G++ + A + +E ++ ++L +VE AL +I+ ++ V Sbjct: 343 TAPIFNNGRLSAARDLAGAEQEELLEKYRTSILAGFADVEKALNAIDGVERQRQWQDQEV 402 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 E + + L+ Y G +LL +L+ +R + L +A+ Q V LY A+G Sbjct: 403 EQARLAFDLAQRRYAAGAETLLTVLETQRTLYLAQDQQAQLRLARLQ---GSVALYKALG 459 Query: 448 SGYN 451 G+ Sbjct: 460 GGWQ 463 >gi|70728385|ref|YP_258134.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68342684|gb|AAY90290.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 503 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 94/432 (21%), Positives = 195/432 (45%), Gaps = 35/432 (8%) Query: 15 LAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++GC +G P LP T +I ++ + + +WW+++ D L++ + +AL Sbjct: 21 ISGC-IGTGGIAPQGKTLPANTLATDEAIKSAAQDAHWPSAQWWQAYGDPQLDRWISLAL 79 Query: 70 QQNLTILQATERINAAKE--------NILSVRADLFPSSYASISHRFI-PNLKTNST--- 117 Q + ++ A R+ AK L ++ D + + +F P +NST Sbjct: 80 QGSPSLAMAAARVRQAKALAGIAESAESLQIKGDATLKRHNWPTDQFYGPGALSNSTTWD 139 Query: 118 --GQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNVISKLIPSYID-ARHFK 171 L + +DL+G R S+ +D A+ A+ A+L +++ ++ SYI + HF Sbjct: 140 NNAALGFSYALDLWG--RESNSTERAVDLAHMSVAEARQAQLELVNNVVRSYIQLSLHFA 197 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +R I L ++ +EL+ + G + + + EA + + L++ + + Sbjct: 198 QR-DIVAATLKQQQQILELAQRRLDGGIGTHFEVSQAEAPLPETHRQLDALDEEIALTRN 256 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G E +Q+ S + L +P +PA+L+ RPD+ ++A Sbjct: 257 QLAALAGKGPGEGAQ-LQRPSLSLGAALKLPS--ALPAELLGQRPDVVASRWQVAAQARG 313 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 I +A + YP++ L GSI G +++ GP + LPIFD G+++S + Sbjct: 314 IDVAHAGFYPNVDLVGSIGFMATGGGALEFLTGKKLNYNVGPAISLPIFDGGRLRSELGE 373 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + +T+++A+K + + L K +V +K+ ++ + +++ Sbjct: 374 ASAGYDMAVARYNQTLVDALKSISDQLIRRESMDKQQAFAAESVAAAQKTYDIATVAFQR 433 Query: 407 GRYSLLDILDIE 418 G L++L+ + Sbjct: 434 GLTDYLNVLNAQ 445 >gi|189346941|ref|YP_001943470.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium limicola DSM 245] gi|189341088|gb|ACD90491.1| RND efflux system, outer membrane lipoprotein, NodT family [Chlorobium limicola DSM 245] Length = 479 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 103/482 (21%), Positives = 218/482 (45%), Gaps = 41/482 (8%) Query: 2 NILRAI----FSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 ++ RA+ F +F++L LA C+ Y + + L + G I + + F Sbjct: 7 SVFRALRAHGFPVFLILGLAACSATAPYRRAEVKLPASYRGAGELSGQQAIGEIPYRSFF 66 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNL 112 +D L L+ + +N + A + I+ A+E++ + PS + ++S +L Sbjct: 67 SDPVLVALIDSVMVRNYDLQIALKNIDYAQESLKQAKLGFLPSLSLNASGAVSRPSDNSL 126 Query: 113 KTNSTGQ-------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + S Q L + W+ID++ + R + +LA + + + Sbjct: 127 SSPSLQQALGQSYSEDYSLSLGTSWEIDIWSRIRSKKKGALAGYLKTVEAAKAVRTKLAA 186 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + R ++ IA + L L + + L++ G + L++ + +A +++ Sbjct: 187 DVASGYYNLRMLDAQLDIAKRNLALADTTLRMIRLQYDAGQVTMLAVEQQDAARQAVLQT 246 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIR 273 +P +E+ + H +S L G YP + IP+ GIPA L++ Sbjct: 247 VPQIEQGIAVQEHALSILTGNYPGA---------VARGRSLASIPVADNLPAGIPASLLQ 297 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PK 329 NRPD+R E + +S A + AK+ +YPSL++ L S + T S FG Sbjct: 298 NRPDVREAEMAVMESHADMAAAKAAMYPSLTITAQGGLNSFRSSNWFTTPGSLFGLVQGA 357 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + PIF +G++K+ ++ ++ I +++++L A+ EV +AL +++ ++ Sbjct: 358 ILQPIFQRGELKAGYEKSRIRREQAEIGFKQSLLKAVGEVSDALVRLDKLREQERAAAAR 417 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V + ++ S + ++ G + L+++ ++ + E+ L+ +RQ + +LY ++G G Sbjct: 418 VRTLEGAVRNSNMLFKSGMATYLEVISVQSGYLQAELALADIRRQHLTAMAELYRSLGGG 477 Query: 450 YN 451 + Sbjct: 478 WR 479 >gi|239816464|ref|YP_002945374.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239803041|gb|ACS20108.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 493 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/429 (23%), Positives = 193/429 (44%), Gaps = 45/429 (10%) Query: 51 KWWESFNDTSLNKLV--KIALQQNLTILQATERINAAKENI------------LSVRADL 96 +WW +F D LN L+ +A NL + +A A +I L ++ Sbjct: 63 QWWLAFGDAQLNTLIDQAVAGNPNLQVARARLARAQASADIAESALKPKVNGELDLKRQK 122 Query: 97 FPSSYASISHRFIPNLKTNSTG-----QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVD 150 F S+Y P ST QL + W++D FG+ R +E+++ ++A A D Sbjct: 123 FNSNY------IYPAPLGGSTQNIGLLQLGASWELDFFGKNRTALEAAIGAANAAAADAD 176 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + S + SY E++ +A + L ++ ++L H + + G ++L L + E Sbjct: 177 AARVLLASNVARSYFQWARLNEQLGVARRTLAQREETLKLVHDRVSAGLDTRLELRQSEG 236 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-----IPINI 265 + I L + + H + L+G P S + +P + + + Sbjct: 237 GLPEARQQIEALGEQIALQQHALDALVGQPDV---------SASLKPPMLEAVKPMALQA 287 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNT 322 IPADL+ R DI ++ + + + AK+ YP+++L G +L + Sbjct: 288 SIPADLLGRRADIAAARWRVEAATSDVANAKTQFYPNVNLTAFAGFQSLGFGKLLKSGSE 347 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W GP ++LPIF+ G++++N+R + ++ TVL+A+ + + ++S + Sbjct: 348 QWGVGPAIHLPIFEGGQLRANLRGKAADLDAAIESYNATVLDAVHDAADQVSSAQSITRQ 407 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVD 441 + + A + + +++ YR G + L++L E A A+ + + +A R L + V Sbjct: 408 QAEQRAAQTAAEGAYDIAVQRYRAGLGNYLNVLTAETAVLAQRRLAVDLAARAL-DTQVG 466 Query: 442 LYIAIGSGY 450 L A+G G+ Sbjct: 467 LARALGGGW 475 >gi|78064709|ref|YP_367478.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77965454|gb|ABB06834.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 523 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 109/470 (23%), Positives = 211/470 (44%), Gaps = 47/470 (10%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAYKEAPAGWKVAQPAD--RTDRGAWWTVYNDPQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQ--------- 119 N TI Q+ A+ + RA FP+ AS S P +S Sbjct: 85 SNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRARTPRTSVSSGSSSSFSSGSSG 144 Query: 120 ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y Sbjct: 145 SISNSYSVGLDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTY----- 199 Query: 170 FKERISIAHQ-ILD----LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 F+ R S A Q +LD Y+++++L+ ++ QG ++ +++ + +++S ++ Sbjct: 200 FQLRTSDALQKLLDDTVKSYEQSLKLTQNQYAQGVAARADVIQAQTQLQSAQAASIDNGV 259 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + H I+TL+G PA+ F + +P + P+++ P+ ++ RPDI E++ Sbjct: 260 ARAQYEHAIATLIGEPASTF--SLSPSPLTAEPPI-TPVDV--PSAILERRPDIAAAERR 314 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 A + +IG+A + +P+L+L+ + + F W+ GP+L +FD G Sbjct: 315 AAAANEQIGVAIAAFFPTLTLSATGGVQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRA 374 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A ++ + ++ VL A ++VE+ L S + + + AV+ + S+++ Sbjct: 375 AQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQRQAVDSAEHSLAIVT 434 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G + L++L + + L+ Q S V L A+G G++ Sbjct: 435 NQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMTSSVGLVKALGGGWS 484 >gi|332185487|ref|ZP_08387235.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332014465|gb|EGI56522.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 473 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 101/465 (21%), Positives = 189/465 (40%), Gaps = 32/465 (6%) Query: 11 FIVLLAGCTVGPEYTKPHM---PLLPTQF---SIGNSKNLINIDTLKWWESFNDTSLNKL 64 + ++ C VGP H PL P + G ++ + +WW +F + L+ L Sbjct: 9 LLACVSACAVGPHDLDAHASLPPLAPAPVIAPASGPAQTVSATIAPEWWHAFGNAQLDAL 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADL-FP-------SSYASISHRFIP------ 110 V AL N + A + A+E + R L FP + +S+ P Sbjct: 69 VAEALAHNNDVAVAEASLRQAQEQARATRGSLLFPQGGLNYQAQRTRVSNALSPAVADQN 128 Query: 111 -NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 L T T Q+ + +D FG R + S+ A + Q+D A++ V + L+ + I+ Sbjct: 129 QQLYTLHTAQVSVSYDVDAFGGNRAQVRSAAARAEVERHQLDAARMTVAANLVTALIERA 188 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 E+++ A + + + + + GA + +A + + E +P L ++ Sbjct: 189 SLAEQVAAAQTAVQVNRDILGALQQRQRLGAVGASDVATQQAALATAEGALPPLVRAEAA 248 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIRYQEKKLA 286 I+TL+G L + S L +P + +P++L+ RPD+ E +L Sbjct: 249 QRTIIATLIGRAPGSALPPLPDLSQ-----LTLPTELPAIVPSELVHRRPDVLAAEAQLQ 303 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A +G A + PS+ L+ G A + F N W+ + P+F ++ Sbjct: 304 GAGADVGAAIAARLPSIQLSANAGGSAQNFGDMFKSGNPFWALLGGITQPLFHANALRHQ 363 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + AE++ + ++ VL A V ++LT + D + + Q A ++++ + Sbjct: 364 QKAAEAALEGAKAQYRAAVLQAFGNVADSLTGLLTDAQALDAAQRASNAAGQALTFARRQ 423 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G L +L+ A+ L AK V L+ A G Sbjct: 424 LALGDVGTLQLLNATATDAQARSQLIQAKAARMTDTVALFQAAGG 468 >gi|134292596|ref|YP_001116332.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134135753|gb|ABO56867.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 470 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 24/418 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS---------- 100 +WW ++D +L+ L++ AL N+ + A + + + + R PS+ Sbjct: 58 RWWRLYDDPALDALIERALASNVDLRAAQANLERSSALLAAARTAREPSAGFDASTNYTQ 117 Query: 101 ---YASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 A +SH P + + G + +DLFG RR IE++ A+ ++ A D+ ++NV Sbjct: 118 QSAAAVLSHVEPPRHEIYNIG-FTMSYDLDLFGGIRRGIEAASADHEAVAAARDLVRVNV 176 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ +Y D + RI + + + L ++ + L+ G + I Sbjct: 177 AAEVARAYSDLCNAGNRIDVLQRAIALQQQRLALTRQLIANGRAPSFEAQRDSGAIDDSR 236 Query: 217 SDIPTLEKSFRMNVH-NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + L+ + R+N ++TL+G P + + + L PI G L+ R Sbjct: 237 AALAPLQ-ARRLNAAFRLATLMGEPPENYDRALLSCRKPLE--LAAPIPSGDGRALLARR 293 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYL 332 PD+R E++LA S A+IG+ + LYP + L SI T + P N ++ GP + Sbjct: 294 PDVRAAERRLAASTARIGVETAALYPDIKLGASIGSTGGAAAFLTPLAN-RFAVGPMVTW 352 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 + + I+ I A + ++ + TVL A++E E +L++ + + +LQ A + Sbjct: 353 NLH-RSAIRDRIDAARADSRASLAHFDATVLTALRETETSLSTYAAALERLQRLQAARDA 411 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + M + GR L LD R E ++ A++Q+ + ++A+G G+ Sbjct: 412 ARDVMERTDELRHGGRVGGLVALDARRTWLAAETAVAAARQQVNDDQIATFLALGGGW 469 >gi|260913185|ref|ZP_05919667.1| outer membrane efflux lipoprotein IbeB [Pasteurella dagmatis ATCC 43325] gi|260632772|gb|EEX50941.1| outer membrane efflux lipoprotein IbeB [Pasteurella dagmatis ATCC 43325] Length = 468 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 108/455 (23%), Positives = 208/455 (45%), Gaps = 29/455 (6%) Query: 16 AGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC T P ++ +P Q K I +WW S+ D L+ L++ L+QN Sbjct: 15 GGCQNTTVPVKSQVELPAQYEQAQYAQGKKAIQ----QWWTSWQDPQLSHLIQQGLEQNK 70 Query: 74 TILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNS---TGQLDSDWKI 126 I A ++ AK R +LFP+ A+ +H + +S G ++ W+ Sbjct: 71 DIATAKSKLAVAKAITKIARGNLFPTIGAAGNANKAHIDVEQFDISSQILNGGVNIAWEP 130 Query: 127 DLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D+FGQ++ ++++ A + + AQ+ +++ V +++ Y+ A H ++ + Q + + Sbjct: 131 DIFGQKQSDLDAANAAVTAQQAQIYGSQVLVANEIAHYYLKALHSHKQSFLLQQTGNALQ 190 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF- 244 + +F G S + ++ + + +++ TL+ F I+ L G F Sbjct: 191 QLERYLQGRFQAGQVSAHEINEINIQRQELKAKQTTLQAQFDAYQRAIAVLTGQIPQGFK 250 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L Q + N L +P++L++ RPD++ + + AK+ AK+DL P Sbjct: 251 LDLPQMKKYNILSTLPSAPKGPLPSELLQQRPDLQARSANIQIQAAKLASAKADLLPRFK 310 Query: 305 LN-----GSIALTHDNSFPGYNTHWS--FGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 L G I L D+ P +T W F + LPIF G+I++NI A+ ++ + Sbjct: 311 LQFLWQTGQIEL--DSPIPTLST-WQNLFNASVQLPIFTAGRIQANIESADERLKQALLQ 367 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + +T+L A+ EVEN+ K L+ + + KK + ++ G + I Sbjct: 368 YDQTLLKALAEVENSYQLQFALHKQAKLLKQTLNIQKKQTRDTQKLFQYGNQTFDST--I 425 Query: 418 ERATAKVEVDLSIAKRQLAKSY--VDLYIAIGSGY 450 + +++ + + + QLA++ ++LY AIG G+ Sbjct: 426 QARLSELTLKEKLLENQLAQAVNLMNLYKAIGLGW 460 >gi|255010230|ref|ZP_05282356.1| putative outer membrane lipoprotein [Bacteroides fragilis 3_1_12] Length = 480 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 113/476 (23%), Positives = 214/476 (44%), Gaps = 43/476 (9%) Query: 2 NILRAIFSLFIV--LLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWW 53 N+ + I + LL+ C + Y +P L S+ ++ + N L W Sbjct: 17 NMKKQIIGMLCATALLSSCHIYKSYDRPKDIEASGLYRDTVSVADTLVSDTANFGNLPWR 76 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP 110 E F D L L++ L N +L A ++ A+ +++S R PS S F Sbjct: 77 EVFTDPQLQALIEQGLTHNTDLLTAALKVKEAQASLMSARLAYAPSLGLSPQGTISSFDK 136 Query: 111 NLKTNSTG-QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + T + + W+IDLFG+ +R + +L AY Q + +IS + +Y Sbjct: 137 HAATKTYSLPATASWEIDLFGKLLNAKRGAQVALLQ-TKAYRQA--VQTQIISGIANTYY 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGA----TSKLSLVKLEAEIKSIESDIPT 221 ++ I Q D+ K+N+E ++ + A T+ + + +A + + IP Sbjct: 194 TLLMLDRQLDITEQTADIMKRNVE--TMQAMKDAAMFNTTSAGVEQSKAAYAQVLASIPA 251 Query: 222 LEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +++S R + +S LL P T +++Q L ++G+P L+ NRPD++ Sbjct: 252 IQQSIRETENAMSMLLAQAPQTIQRGVLEEQ------QLPEEFSVGVPLQLLSNRPDVKA 305 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFD 336 E LA + A++ YP ++++GS T+ PG G L P+F Sbjct: 306 AEMALASTYYNANSARAAFYPQITISGSAGWTNSAGSAIVNPGKLLASVLG-SLTQPLFY 364 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +G + ++ A++ +E + +Q+++LNA EV NAL + + VE +K+ Sbjct: 365 RGANIARLKIAKAQQEEAKLAFQQSILNAGSEVSNALYQYQSASEKTASRKMQVESSEKA 424 Query: 397 MSLSMINYRQGRYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++ G + L++L E++ +A++ +V+ + + Q + V LY A+G G Sbjct: 425 SEYTKELFKLGTSTYLEVLSAEQSLLSARLSQVNDTFDRMQ---AVVSLYQALGGG 477 >gi|313148024|ref|ZP_07810217.1| outer membrane protein [Bacteroides fragilis 3_1_12] gi|313136791|gb|EFR54151.1| outer membrane protein [Bacteroides fragilis 3_1_12] Length = 463 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 111/463 (23%), Positives = 209/463 (45%), Gaps = 41/463 (8%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ ++ + N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPKDIEASGLYRDTVSVADTLVSDTANFGNLPWREVFTDPQLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTG-QLDS 122 L N +L A ++ A+ +++S R PS S F + T + + Sbjct: 73 QGLTHNTDLLTAALKVKEAQASLMSARLAYAPSLGLSPQGTISSFDKHAATKTYSLPATA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFG+ +R + +L AY Q + +IS + +Y ++ I Sbjct: 133 SWEIDLFGKLLNAKRGAQVALLQ-TKAYRQA--VQTQIISGIANTYYTLLMLDRQLDITE 189 Query: 179 QILDLYKKNIELSHLKFTQGA----TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 Q D+ K+N+E ++ + A T+ + + +A + + IP +++S R + +S Sbjct: 190 QTADIMKRNVE--TMQAMKDAAMFNTTSAGVEQSKAAYAQVLASIPAIQQSIRETENAMS 247 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL P T +++Q L ++G+P L+ NRPD++ E LA + Sbjct: 248 MLLAQAPQTIQRGVLEEQ------QLPEEFSVGVPLQLLSNRPDVKAAEMALASTYYNAN 301 Query: 294 IAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ YP ++++GS T+ PG G L P+F +G + ++ A++ Sbjct: 302 SARAAFYPQITISGSAGWTNSAGSAIVNPGKLLASVLG-SLTQPLFYRGANIARLKIAKA 360 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E + +Q+++LNA EV NAL + + VE +K+ + ++ G Sbjct: 361 QQEEAKLAFQQSILNAGSEVSNALYQYQSASEKTASRKMQVESSEKASEYTKELFKLGTS 420 Query: 410 SLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L E++ +A++ +V+ + + Q + V LY A+G G Sbjct: 421 TYLEVLSAEQSLLSARLSQVNDTFDRMQ---AVVSLYQALGGG 460 >gi|134291709|ref|YP_001115478.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134898|gb|ABO59223.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 500 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 107/471 (22%), Positives = 213/471 (45%), Gaps = 47/471 (9%) Query: 18 CTVGPEYTKPHMPLL--------PTQFS---IGNSKN-LINID---TLKWWESFNDTSLN 62 CTVGP + P P + P S G+ + ++ D T WW F +++ Sbjct: 37 CTVGPNFVPPPAPRVERFIAPDDPHAASGPWTGDGRTQALSPDAPLTRDWWTRFGSRAID 96 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIP--------- 110 V AL + T+ A + ++ + + + FP + + R P Sbjct: 97 ASVDAALTGSPTLALAEATLRRSEHALRAGQGVFFPQIDAQAGAARERATPSRGPALPAS 156 Query: 111 --NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 NL T S + +DL+G +RR +E+ A +D+ + A L + + ++ + I Sbjct: 157 IFNLFTLSA---TVSYTLDLWGGERRQVEALAAGVDAQRHALAGAYLMLSANVVNTMIAR 213 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +++ + + + L + I L+ + T GA + ++++ LE++ ++++ +P L++ R Sbjct: 214 AAYRDEAAATRETIGLVDEQIRLTRAQVTAGAAAYVAVLTLESQRATLQATLPALDQK-R 272 Query: 228 MNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ LL YPA + + + L + P+ L+R RPDI+ E +L Sbjct: 273 AQADDLLALLAGRYPA----DWRTPELSLAAIELPASLPDTAPSSLVRRRPDIQQAEAEL 328 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A++G+A + LYP+L+L+ S N F WS G + P+F G + + Sbjct: 329 HVASAQVGVATAALYPNLTLSASGGFDSGVAANLFSPAGRAWSVGAGVTAPLFHGGTLLN 388 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R A+ + E ++++ VL A +V +AL ++ D + A+ + ++ L+ Sbjct: 389 QRRAAQDAYDEADASYRQVVLAAFSQVADALRALANDAAALDAQARAMAAARDALRLAQA 448 Query: 403 NYRQG--RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G Y L + D++ A++ ++A+R + V Y+A+G G+ Sbjct: 449 GYDAGITGYVPLLVADVQYHQARIAWLQALAQRL--QDTVAFYVALGGGWG 497 >gi|114800045|ref|YP_760356.1| RND efflux system outer membrane lipoprotein [Hyphomonas neptunium ATCC 15444] gi|114740219|gb|ABI78344.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomonas neptunium ATCC 15444] Length = 450 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/451 (20%), Positives = 206/451 (45%), Gaps = 23/451 (5%) Query: 12 IVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++ L GC + E + +P + + ++ WW+ FN L+ L+ Sbjct: 11 VLTLTGCASLNLIERETSTDAGLAMPDGYDYASQVAALSAPEQAWWQGFNSADLDALITE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---TNSTGQLDSDW 124 AL N T+ Q ++A++ ++ + A P + S+S + +++ +L + + Sbjct: 71 ALAANNTLAQGLANVDASRASLRTANAAFLPQASGSLSSSSNTSAGLDDVDASARLSASY 130 Query: 125 KIDLFGQRRHIESSLANLDSA--YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++DLFG ++ A +AQ + +L V S + + + +E++++A + L+ Sbjct: 131 QLDLFGANAAGRNAALANLDAAIFAQRAL-ELTVQSDVAAGWFNLLSAREQLAVARRNLE 189 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ E+ ++ G S + A++ + + IP LE + LLG Sbjct: 190 ISERIFEIVQFRYEAGVISGFDVSSQSAQLANARARIPQLESQITSQETALGILLGRVPQ 249 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 Y Q++ ++ +P G+P+DL+ RPD+ E L + A I A++ +P Sbjct: 250 ---GYTAPQADIL--SIALPAAEPGLPSDLLLRRPDLMQSEASLRAANANIDAARAAFFP 304 Query: 302 SLSLNGSI--ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 S+ L + ALT G S L IF G++ + + A++ + Q ++ Sbjct: 305 SIDLGAGLSSALTGGTDLIG-----SLSASLAQTIFSGGRLDAQLEGAQARREGQLAGYR 359 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++L+A+++V+ +L +I+ ++ +L A + + ++ + I Y+ G L +L+ ++ Sbjct: 360 QSILSALRDVDVSLKAIDANEVREDQLLIARDAAEDALRAAEIQYQAGTGDLTSLLNAQQ 419 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + ++LY+A+G GY Sbjct: 420 NYFDAANSYVLGRLDRLTAAINLYVAVGGGY 450 >gi|330892812|gb|EGH25473.1| rnd efflux transporter, outer membrane lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 273 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 5/197 (2%) Query: 256 QPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 QP L+ N+ +PA +R RPDI E++LA + A+IG+AK+DLYPSLSLNGSI+ + Sbjct: 61 QPVLF---NVDSVPAQTLRQRPDIAALERELAATSAEIGVAKADLYPSLSLNGSISWSAS 117 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 S G T WSFGP L +P+FD GK + + A +S Q WQ V +KEVENAL Sbjct: 118 GSASGLKT-WSFGPSLSVPLFDTGKRLAELDSARASYQIAKAEWQNGVRAGVKEVENALA 176 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 +++ + + A ++ S ++R G SLL + + R+ E+ R Sbjct: 177 NLHGAAQRTEQASIAALEYRSYFQSSEASWRAGSISLLTLEEARRSALSAEIQHIELVRD 236 Query: 435 LAKSYVDLYIAIGSGYN 451 + +V LY A+G ++ Sbjct: 237 QVQYWVALYKAMGGSWD 253 >gi|317477694|ref|ZP_07936888.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] gi|316906128|gb|EFV27888.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] Length = 466 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 102/431 (23%), Positives = 196/431 (45%), Gaps = 31/431 (7%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 S+ + + +I +L W E F D L L++ ALQ N +L A +RI A+ ++S + Sbjct: 48 LSLFAASDTTSIASLSWRELFTDPQLQSLIEQALQGNTDLLSAQQRIKEAEATLMSAKLS 107 Query: 96 LFPS----SYASISHRFIPNLKTNST--GQLDSDWKIDLFG-----QRRHIESSLANLDS 144 PS +S N K + T G + W++D+FG +RR L +L+ Sbjct: 108 YLPSFMLTPQGGVSS--FDNSKGSWTYSGIASASWEVDIFGKLTNAKRRSKALYLQSLE- 164 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 Y Q ++I+ + Y E+ I+ + +++++ G T++ S Sbjct: 165 -YEQA--VSTSLIANVANLYYTLLMLDEQYRISEETAASWRESVRTMRAMMAAGMTNEAS 221 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPI 263 + + +A + +E+ + L + + +++S LLG P T + + F L Sbjct: 222 VSQSKANCRQVEASLLDLRQQVKEVENSLSILLGDVPGT--IERGRLAGQEFPQEL---- 275 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PG 319 +G+P L+ RPD++ E LA + A+S YPS++L+G+ T+ PG Sbjct: 276 AVGVPLQLLSRRPDVKSAELSLASAFYSTNAARSAFYPSITLSGTAGWTNSAGSMIVNPG 335 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + G L P+F+KG + ++ A++ +E + +Q+ +LNA EV NALT + Sbjct: 336 KLLFSAIG-SLTQPLFNKGLNVAQLKIAKAQQEEARLAFQQALLNAGSEVNNALTQVQVA 394 Query: 380 K-KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + K + + L S ++ + G + L++L ++ ++ + + Sbjct: 395 RGKTELRARQITSLETTVRSTRLL-MQHGTSTYLEVLTAQQGLLSAQLTQVADRFDEIQG 453 Query: 439 YVDLYIAIGSG 449 ++LY A+G G Sbjct: 454 IINLYQALGGG 464 >gi|319794649|ref|YP_004156289.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315597112|gb|ADU38178.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 500 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/427 (23%), Positives = 192/427 (44%), Gaps = 41/427 (9%) Query: 51 KWWESFNDTSLNKLV--KIALQQNLTILQATERINAAKENILS------VRADLFPSSYA 102 +WW +F DT LN L+ +A NL + QA A +I V+ DL + Sbjct: 72 QWWLAFGDTQLNTLIDQAVAGNPNLQVAQARLARAQASADIAGAALKPQVKGDLDLNRQK 131 Query: 103 SISHRFIPNLKTNSTG-----QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNV 156 S+ P ST QL + W++D FG+ R +++++ ++A A D A++ + Sbjct: 132 FNSNYIYPAPLGGSTQNIGLLQLGASWELDFFGKNRTALDTAIGAANAAAADADAARVLL 191 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 S + SY +++++A + L + ++L + + G ++L L + E + Sbjct: 192 ASNVARSYFQWARLNDQLTVAQRTLAQRDETLKLVRDRVSAGLDTRLELRQSEGGLPEAR 251 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------I 267 I L + + H + L+G P N +L P+ G I Sbjct: 252 QQIEALNEQIALQQHALDALVGQP-------------NVSASLKPPVLAGVKPMALQANI 298 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 PADL+ R DI ++ + + + AK+ YP+++L G +L + W Sbjct: 299 PADLLGRRADIAAARWRVEAATSDVANAKTQFYPNVNLTAFVGFQSLGLGKLLKSGSEQW 358 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP + LPIF+ G++++N+R + ++ TVL+A+++ + ++S + Sbjct: 359 GVGPAISLPIFEGGRLRANLRGKSADLDVAVESYNATVLDAVRDAADQVSSAQSITRQQA 418 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLY 443 + + A + + +++ YR G + L++L E + A+ + + +A R L + V L Sbjct: 419 EQRAAQTAAEGAYDIAVQRYRAGLGNYLNVLTAETSVLAQRRLAVDLAARAL-DTQVGLA 477 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 478 RALGGGW 484 >gi|187479285|ref|YP_787310.1| multidrug efflux outer membrane lipoprotein [Bordetella avium 197N] gi|115423872|emb|CAJ50423.1| multidrug efflux outer membrane lipoprotein [Bordetella avium 197N] Length = 454 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 108/446 (24%), Positives = 199/446 (44%), Gaps = 18/446 (4%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LLA C G T H P + T + WW +F D L+ LV+ AL +N Sbjct: 11 LLLAAC--GLMRTPYHPPAVQTPAEWQYAPQATAASGGMWWRNFQDPVLDTLVEAALARN 68 Query: 73 LTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLK---TNSTG-QLDSDWKI 126 + A ++ A+ +ADL P S S + N + T ST +L + W++ Sbjct: 69 NDLAVAALKVRRAQLQAGLAQADLHPTLSGTGSFNRNRALNGERATTRSTNVELAASWEL 128 Query: 127 DLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DL+G R A+ +A + D A L++I Y +R++ + + + Sbjct: 129 DLWG-RLSSARDAADWQAAATEQDRQSAALSLIGTTAKLYWQTAFLNQRMASSRESIAYA 187 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +EL ++ G S L + + + + E+ L++ V+ ++ L P Sbjct: 188 RRTLELVQTQYEAGGASGLEIAEAKENLAGQEAAYIELQQQKVEAVNGLTILFDGPPDRV 247 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 Q+ P ++ G+PA L+ RPD+R E +L ++A ++ YPSLS Sbjct: 248 AADPQRLPQGMLPG----VDAGLPAGLLGRRPDLRAAEARLRAAMATSDATRASYYPSLS 303 Query: 305 LNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 L G++ + NS N + G L LP + +++ N+R AE+ + +++ + Sbjct: 304 LTGALG-SASNSLGNLLANPVAALGSGLSLPFLNWNQMRLNLRIAEADYEILVAQFRQAL 362 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A+ +VEN L++ + + L+ A+E + + L + YR G +L LD + Sbjct: 363 YQAMADVENTLSARAQLARRARLLEAALEASRDAERLYEVRYRAGAVALRVWLDAQEKRR 422 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGS 448 E+ + + Q ++ VD+Y A+G Sbjct: 423 NAEIAVDDNRLQQLRNQVDVYQALGG 448 >gi|325982065|ref|YP_004294467.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosomonas sp. AL212] gi|325531584|gb|ADZ26305.1| RND efflux system, outer membrane lipoprotein, NodT family [Nitrosomonas sp. AL212] Length = 483 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/481 (24%), Positives = 212/481 (44%), Gaps = 43/481 (8%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I + I S +VL + K LPT F G S N +KW + F+D +L Sbjct: 12 IFQIIASSALVLTLQACIPDSLIKKEDTHLPTVFKEGVSDE-DNAANIKWEDFFSDPNLV 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP----------------SSYASISH 106 L+ IA++ N I +RIN A+ I + R P + + ++ Sbjct: 71 SLLDIAVENNKEINIMMQRINIARNEIQARRGQYLPFVGIGGSAGKERVGEFTRFGAVEE 130 Query: 107 -------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 R P + L S W+ID++ + R+ + +A + Y + K +++ Sbjct: 131 NLPVREGRHFPRYVGDYHFGLFSTWEIDIWKKLRNAKQ-VAVFE--YMASEEGKNFLVTN 187 Query: 160 LIPSYIDARHFKERISIAHQILDL-YKKNIELSHLKFTQ-----GATSKLSLVKLEAEIK 213 L+ A + E +S+ +Q+ +L +I+ + LK + S L++ + EAE+ Sbjct: 188 LVAEI--AHSYYELLSLDNQLNNLELNISIQQNALKMVRRLQEYARASTLAIKRYEAEVA 245 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 +S + + +S + + I+ LLG +Q+ S +F + GIP+ L++ Sbjct: 246 KNKSKLYQINQSITVVENRINFLLGRTP----QPIQRASGSFMEFKPFMLKTGIPSQLLQ 301 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----K 329 NRPDIR E +L+ + I +A+++ YPS + I NT S Sbjct: 302 NRPDIRQAELELSAAALNIEVARAEFYPSFGIRAGIGFEAFAVKYLINTPESLAAMIAGD 361 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+ ++ I++ + A S + +++ ++ A EV N +++IN K Sbjct: 362 LVAPLVNRNAIEAEYKNANSRQIQAAYEYEQRIIRAYTEVANQVSNINNLDKSYQLKSEQ 421 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 VE KS+ ++ ++ R LD+L +R T + DL K++ + VDLY ++G G Sbjct: 422 VEALSKSIDIANNLFKSARTDYLDVLLAQRETLDAKADLIEMKQKQIDAMVDLYRSLGGG 481 Query: 450 Y 450 + Sbjct: 482 W 482 >gi|330816699|ref|YP_004360404.1| hypothetical protein bgla_1g18030 [Burkholderia gladioli BSR3] gi|327369092|gb|AEA60448.1| hypothetical protein bgla_1g18030 [Burkholderia gladioli BSR3] Length = 520 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/423 (22%), Positives = 186/423 (43%), Gaps = 26/423 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ AL+ N +I QA R+ A I S RA LFP S S Sbjct: 64 ALDWASQFGDPQLPKLIDEALEGNPSIAQAQARLAKASAYIQSSRATLFPKVEGSYSWTR 123 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 F P N + + L + W++DL+G+ R ++S+++ +A A+ A++ Sbjct: 124 ELYSGNGLFPPPYGGNWFSENNALLSASWELDLWGKNREKLKSAVSQQKAAQAEFQQARI 183 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + + + Sbjct: 184 TLATSIARTYNQLAQLYALRDIAQREIGNRETVGKITEGRVGAGLDTNVERQTARGNVAT 243 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L +P I + IPADL+ Sbjct: 244 SQSSLSELDGQITTVRYQLAALLGKGPDRGLQIAMPV---LKPGGAIDLPGNIPADLVSR 300 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDI ++ +A + K++ +P ++L G A + FGP ++ Sbjct: 301 RPDIVAARWQVEARIADVKETKAEFFPDVNLAAGFGFDAFGWGQFLKFASRQAQFGPAVH 360 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIF G +++ +R + + + +T++ A+ +V + +I K + Q A++ Sbjct: 361 LPIFYGGALRAQLRGSYADYDLSVANYNQTLIGALNDVATQVATIRAVDKQMGDAQRALD 420 Query: 392 LHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGS 448 ++ L++I Y+ G L +L DI R +A+ V +L + +R + + L ++G Sbjct: 421 ASTRAYELAVIRYKAGLSPQLQVLSADINRLSAEQTVTNLVMRRRDM---QIGLIKSLGG 477 Query: 449 GYN 451 G++ Sbjct: 478 GFD 480 >gi|241764320|ref|ZP_04762349.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] gi|241366334|gb|EER60871.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] Length = 467 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 205/460 (44%), Gaps = 24/460 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L LAGC E +P P + + + WW + D L++L + L Sbjct: 11 LVACGLAGCAHVAEMPAVPLPEAPAYRGAPQAAAVPALQRDTWWTLYQDPELDRLQQQLL 70 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNSTGQ------- 119 + + A R A+ S+RA PS AS + R N G Sbjct: 71 ASSPDLGSALARYQQARAATDSLRAARLPSVGASADVVRTRQSENRPLRGAGSSNYYNSG 130 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L D+++DL+G+ R + + A +A A + A+L + ++L + R + I Sbjct: 131 TLSLSLDYELDLWGRISRQVAAGAAEEQAAQADLAGAQLALQAQLADFLLALRGADQEIE 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + + + + + G S L + + EA+ +S S + ++ + H I+T Sbjct: 191 LLRETEAAFGRAAGMVVERHRAGLASGLDVAQAEAQQESARSQLHQVQAQRDVLEHAIAT 250 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G A+ F +++ P I G+P++L++ RPDI ++++A + A +G+A Sbjct: 251 LVGSHASTF-SIQAAPASDVLPT----IPTGVPSELLQRRPDIAAAQRRVAAANAGVGVA 305 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +PSL L+ + N N W+ GP L +FD G+ ++ + RAE+ Sbjct: 306 RTAFFPSLRLSATGGYQSSDLSNIIAAPNVFWAIGPGLLANLFDGGRRRAEVARAEAVLD 365 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E T++ TVL A ++VE+ L + Q V ++++ ++ YR G S L Sbjct: 366 ETGQTYRATVLAAFQQVEDQLALLRRYGDATQAEQRTVAASRRALDMATSRYRDGAASYL 425 Query: 413 DILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 D++ + + + L +A RQ ++ V L AIG G++ Sbjct: 426 DVVAAQTTNLQARRNALDLATRQR-RATVQLIRAIGGGWS 464 >gi|170696633|ref|ZP_02887752.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170138456|gb|EDT06665.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 495 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 187/416 (44%), Gaps = 29/416 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 W F D L +L++IAL N + A + + RA L PS + S R Sbjct: 89 WRNFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALGPSVTGTGSLTRERT 148 Query: 109 IPNLKTNSTGQLDS-DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + ++S + + W++D FG+ R ++ +L N + A ++++I+ + Y+ Sbjct: 149 QGAIASSSDVSVGTTSWEVDFFGRLRSLKRQALENYLATDASRQSTQISLIATVATDYLT 208 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + + + + +++ G S L + + + + S ++ + + ++ Sbjct: 209 LLADERLLQLTENTVKSDQSTYDVTRRVQQLGNASLLDVQQAQNSLASAKASLASYRRAV 268 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + +N++ +LG P H + +++ I G+P+ L+ RPDI E L Sbjct: 269 AQDRNNLAAVLGAP---IPHDLPPARAFDDESMFADIGAGVPSLLLIRRPDIVQAEHALK 325 Query: 287 DSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + A IG A++ +P ++L G+ + T N F W+F P + +PIFD G K++ Sbjct: 326 AANANIGAARAAFFPKIALTATAGTSSSTLSNLFKAGTGAWAFAPSVSVPIFDYGSNKAS 385 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKS 396 + A+ Q + ++ + A KEV NALT+ ++ D++ V Q Sbjct: 386 LDVAKIEKQIEVADYESAIQTAFKEVSNALTARATYVDQVHADREYVASAQ-------SY 438 Query: 397 MSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SL+ Y+ G S L LD +R TA+ ++ I RQ + V LY +G G+ Sbjct: 439 YSLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDILSRQ--SNLVTLYKVLGGGW 492 >gi|330816650|ref|YP_004360355.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|327369043|gb|AEA60399.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] Length = 593 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 112/483 (23%), Positives = 220/483 (45%), Gaps = 50/483 (10%) Query: 6 AIFSLFIVL-LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINID----TLKWWESF 56 A+ L I L +AGC V P+ T+ + P G + N D + WW ++ Sbjct: 11 ALAVLAISLTMAGCASMGNVAPQATR----VDPATLDAGAAIRAANRDAGWPSADWWRAY 66 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPN--- 111 D L+ + A N ++ A R+ A+ AD P ++ + P+ Sbjct: 67 GDPQLDGWIAAAQAGNPSLAAAQARVRQAQAVARIAHADELPQLDGELALQRKHWPDDYF 126 Query: 112 ------LKTNS---TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISK 159 TNS +G L+ + +DL+G+ ++ ++ LDSA AQ A+L + Sbjct: 127 YGPGTLANTNSWNNSGTLNLSYHLDLWGKDKN--NAERALDSARAQAADERAARLELEVN 184 Query: 160 LIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +YID A++F + IA Q D + I+L+ + G ++L L + E+ + Sbjct: 185 VVRAYIDFAKNFA-LLDIAQQTYDRQNELIQLAQKRLRAGIGTQLELSQAESPLPDYSRQ 243 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNR 275 I + +++ ++ H ++ L G P K + L P ++ +PA+LI R Sbjct: 244 IDSYQEAVQLGRHQLAALAGKGPGAGDTLTRPKLA------LDTPASLPSMLPAELIGRR 297 Query: 276 PDIRYQEKKLADSVAK-IGIAKSDLYPSLSLNGSIA-LTHDNSFPGY----NTHWSFGPK 329 PD+ + L D+ A+ I +AK+ YP++ L S+ ++F G+ N WS GP Sbjct: 298 PDV-VAARWLVDAQARGIDVAKAQFYPNVDLLASLGGFGVGSAFAGFLRSMNGGWSAGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIF+ G++++ + A + E + +T+++A+K++ + + I + Sbjct: 357 ITLPIFEGGRLRAQLGAASAGYDEAVDQYNQTLVSALKDIADDVVRIRSLDTQREDAARS 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V L +++ LS +++G +++L + + + + + + ++ L A+G G Sbjct: 417 VALTRRTFDLSHQGFKRGLTDYVNVLVAQSQLLRAQESQTRVEAERLAAHASLMAALGGG 476 Query: 450 YNP 452 P Sbjct: 477 LEP 479 >gi|330824520|ref|YP_004387823.1| NodT family RND efflux system outer membrane lipoprotein [Alicycliphilus denitrificans K601] gi|329309892|gb|AEB84307.1| RND efflux system, outer membrane lipoprotein, NodT family [Alicycliphilus denitrificans K601] Length = 495 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/482 (24%), Positives = 212/482 (43%), Gaps = 50/482 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL---------------PTQFSIGNSKNLIN---ID 48 + L LAGC GP++ +P P + PTQF G ++ L+ I+ Sbjct: 23 VAGLVTAGLAGCAAGPDFKRPTAPDVARYTAIPVADRTASAPTQF--GETQRLVEGLPIE 80 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSV 92 T +WW+S ++L+ L+ A + T+ + + A+E + S Sbjct: 81 T-QWWQSLGSSALDGLINEAFHVSPTLASISANLRHAQELLAAQAGSTQYPQVDVALGSQ 139 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLANLDSAYAQVDI 151 R + PSS +L S G + +DL G RR +E+ A D +++ Sbjct: 140 RQQMSPSSQGLSGDARQFSLYNASVG---VHYNLDLAGGNRRALEALAARADYRRFELNA 196 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + + I ++ IL + + + L+H + G S + L+A+ Sbjct: 197 ARLALAGNMATAAITRARLAAQLEATTAILRVQDEQLRLAHERVRIGQASPDEALSLQAQ 256 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + +++P L K + H ++ L G P T + +F L + + + +P++ Sbjct: 257 AEQTRAELPALRKQLQQTEHLLAVLAGRAPGTGGIPAFTL--ADF--TLPVEMPLVVPSE 312 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFG 327 L+R RPDI+ E L + A G+A + LYP ++L+ GS ALT F G + W Sbjct: 313 LVRRRPDIQASEALLHAANADYGVAVAKLYPQINLSANLGSQALTTGALFGGGSAVWGLV 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L P+F+ G + + R A ++ +Q VL +++ V + L ++ D + +T L Sbjct: 373 AQLTQPLFNPG-LPAEKRAALAAFDAAVANYQSVVLESLRNVADTLRAVESDAQTLTALA 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + + S+ YR G S L +L ++ + +++ + Q V LY A+G Sbjct: 432 AADKAAQASLQSVERQYRLGAASYLQLLIAQQQAQSIRINMVAVQAQRLVDSVALYQALG 491 Query: 448 SG 449 G Sbjct: 492 GG 493 >gi|284041416|ref|YP_003391346.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] gi|283820709|gb|ADB42547.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] Length = 484 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 112/488 (22%), Positives = 222/488 (45%), Gaps = 65/488 (13%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F ++LL+GC V P P F +G S + + I + W + F+D +L +L+ Sbjct: 16 FVAGLLLLSGCQVPRLMQPPKARQTPVSF-VG-SADSVGIASQNWRQFFDDPNLVQLIDT 73 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------------HRFIPNLK 113 AL NL + AT+RI A+ + R L P A S F NL Sbjct: 74 ALAGNLDLRIATQRIEMARASFDYSRGFLAPQVNAVGSAGLDRYGQTTLNGVGNFDTNLS 133 Query: 114 TNSTGQL-------------DSDWKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLN 155 N G L S W+ID++G+ R+ + + LA+ +A V + Sbjct: 134 DNIRGNLVIPNPTPDYFLGARSTWEIDIWGKLRNRKKAAYVRFLASEKGRHAVVT----S 189 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++++ Y I + + L ++ ++L ++ G ++L++ + A++ + Sbjct: 190 LVAEVARYYYSLLALDGEQEIIQKNITLQQRALDLVRIQKQAGRVTELAVQQFAAQLLNT 249 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YP-ATEFLHYMQKQSNNFQPNLYIPINI--GIPADL 271 S +++ + ++ L+G YP A +Q+++ +P + G+PA + Sbjct: 250 RSRQKQIQQQIIEAENQLNRLMGRYPQAIVRGKSLQERA--------LPGQVLTGLPARM 301 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK-- 329 + RPDIR E +LA + + +++ PSL+L+ + L NSF + F P Sbjct: 302 LARRPDIRQAELELAAANIDVEAVRAEFLPSLNLSAYVGL---NSFRAASL---FNPASI 355 Query: 330 -------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L P+ ++ +K+N R++E+ ++E + +Q+T++ EV +L + + + Sbjct: 356 AAGILGGLAGPVINRRFVKANYRQSEAQSREAFYRYQQTIVTGFGEVVTSLRGVENFRSV 415 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 V + V++ + +++ S + G S L+++ +R+ + E+ L K+ S DL Sbjct: 416 VDLQEQEVDVLENAVATSNDLFSSGYASYLEVITAQRSVLEAELALISTKQSQFLSLTDL 475 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 476 YRALGGGW 483 >gi|117618497|ref|YP_857495.1| outer membrane efflux protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559904|gb|ABK36852.1| outer membrane efflux protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 457 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/410 (23%), Positives = 187/410 (45%), Gaps = 23/410 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW+ F+D L++L++ L N + A R+ +A +L PS A IS + Sbjct: 54 WWQGFHDPELDRLIEAVLAANPDMQVAGLRLRSALLGADLADTNLTPSVNAGISGNGTKD 113 Query: 112 LKTN-STGQLDS----DWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSY 164 LK+ ++G + +++DL+G+ + + A AQ D+A +L +I K + Y Sbjct: 114 LKSGKASGSMGPSLTLGYEVDLWGRLASVRDQASWEAEASAQ-DLAATRLMLIGKALEQY 172 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + I++ Q L Y++ +L+ K+ GA ++L LV+ + ++++ +L Sbjct: 173 WQLAYLGSAITLGQQQLANYERAEQLTQAKYRAGAVTRLDLVQASQQKAGKQAELSSLLM 232 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY----IP-INIGIPADLIRNRPDIR 279 + + LLG + F+P IP + +GIPAD++ RPD+R Sbjct: 233 QQEQARNALRLLLGRSSGPL---------AFEPKALPTAPIPTLAVGIPADVLARRPDVR 283 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKG 338 E +L ++AK ++ YP+LSL G + + D + N + G L LP + Sbjct: 284 AAELRLRKTLAKGDEIRTGFYPTLSLTGGASSSSDTLTQVLQNPVGTLGATLALPFLEYN 343 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K + I + Q +++ + A+ EVE+ L + + ++ + L ++ K++ Sbjct: 344 KTRLAIAGSRLDYQIAEAEFRKQLYGALVEVEDGLATRHHGEQRLNYLAEQLDFAKEAER 403 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L+ Y+ G + LD + E+ L +++ + +Y A+G Sbjct: 404 LARARYQAGATGVQPWLDEQNRLWDAELALLGQQKEQLNTMARIYKALGG 453 >gi|167615149|ref|ZP_02383784.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 494 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 101/473 (21%), Positives = 208/473 (43%), Gaps = 43/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMP---------LLPTQFSIGNSKNLINIDTL---KWWESFNDTS 60 L+ GC VGP++ +P P + F+ + + D WW F Sbjct: 26 ALVTGCAVGPDFVRPEPPRVDAYVPGGAVRASFAASGATQTLAPDAPFPDAWWRLFGSHD 85 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP------- 110 ++ V A + T+ A + ++ +++ +P + A R++P Sbjct: 86 IDAAVDDAFAGSPTLAGAQATLRRSEHELMAGAGVFYPQADAQAGASRQRYVPLRTGANL 145 Query: 111 -----NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NL T ST + ID++G +RR++E A D+ + + A+L + + ++ + Sbjct: 146 PASIFNLFTLST---TISYAIDIWGGERRNVEGLAAQADAQHHALAAARLTLAANVVNTM 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + + I++ +++ L + + L+ + + G ++ +++ L+A ++++ +P LE+ Sbjct: 203 IARAAYADEIAVTRELIALTDEQVRLTRAQVSAGTSAYTAVLALDAARAALDASLPALEQ 262 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 ++TL G YPA M ++ +P + +P++L+R RPDI Sbjct: 263 KIGQADDLLATLAGRYPAERVPPGMSLA------DIALPARLPQTVPSELVRRRPDILQA 316 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E L + A IG+A + L+PS++L S + + F WS G + P+F G Sbjct: 317 EAALHAASANIGVATAALFPSITLTASGSFNTVQLPSLFAAGGKAWSVGAGITAPLFRGG 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + + E +++ VL+A +V + L +++ D + A+ + ++ Sbjct: 377 ALWYQRKAGIDAFDESSAAYRQVVLSAFAQVADTLRALDHDAAALEAQSRAMAAARDALR 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L I Y G L +L ++ + + A Q + V LY A+G G++ Sbjct: 437 LVTIEYETGAAGYLQVLAADQQYRQARLAWVQASAQRLQDTVALYAALGGGWD 489 >gi|325925666|ref|ZP_08187046.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325543925|gb|EGD15328.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 448 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 23/416 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASI 104 WW +F LN +V+ AL+ N + A + A++ + + R P +S Sbjct: 23 WWRAFGSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRD 82 Query: 105 SHRFIPNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 S P+ ++ T QL + +D+FG RR +E++ A + Q D A L++ + Sbjct: 83 SVVPAPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTA 142 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + I + ++ A + + ++ L+ + T GA ++ + ++ Sbjct: 143 NVVNAAIGEAAVRAQLEAARAQVAIAEQLCTLTERQQTLGALGAAQVLAQRTALAQAQAA 202 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P LEK ++ L G L + L +P + + +P+ L+ RP Sbjct: 203 VPGLEKQLEQQRTLLAILGGQ-----LPGDAAGAPFTLDTLKLPAQLPLSLPSRLVDRRP 257 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLP 333 DIR E + + A IG+A + PS++L G A + F NT WS L P Sbjct: 258 DIRAAEAQAHAASALIGVAAAARLPSITLSVAGGGSASSVGRMFAAGNTQWSVAGSLLQP 317 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F G + R AE+ + ++ VLNA EV NALT++ D + + A L Sbjct: 318 LFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRACADAQALA 377 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++++L+ G + D+L ++A + A+ V LY A+G G Sbjct: 378 ERTLALAQRQQTVGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 433 >gi|326800000|ref|YP_004317819.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] gi|326550764|gb|ADZ79149.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] Length = 476 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 107/471 (22%), Positives = 208/471 (44%), Gaps = 43/471 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + + + + ++A C V +Y P ++ + + + + + W + F DT+L K+ Sbjct: 6 KGLIVVILSIVASCKVTQKYDAPDAKII-SNYRSQTQADSNTVASKNWSDFFTDTALRKI 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP--------NLKT 114 + L++NL + +RI AA+ R FP + ASI + N T Sbjct: 65 IADGLEENLDLKMGIQRIVAAEAAFSQSRQAFFPEINGTASIKRSRLAFPQGYGLINNAT 124 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L W+ D++G+ + +++LANL + A + +++ + +Y ++ Sbjct: 125 QYDAGLTMAWEADIWGRLKSSKKAALANLLATEAAQRAIRSKLVADIATNYYALLALDQK 184 Query: 174 ISIAHQILDLYKKNI----ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + L+ KK++ EL GA ++V+ EA ++E IP +++ R Sbjct: 185 LKVLELTLENRKKDVLTMRELKASAVVNGA----AVVQSEANQYAVEVLIPDIKRQIRET 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + LLG P+ SN P + ++ GIP L+R RPD+ E + Sbjct: 241 ENVLCLLLGRPSGAIER--TALSNQKLP---LDLSAGIPVQLLRFRPDVAEAELVFRTAF 295 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRR 346 ++ +AK+ YP ++ + T + + F L P+F++G K+ ++ Sbjct: 296 EQVNVAKTAFYPGFNITAAGGFTSFDISEWFTNAGLFANIMGGLTQPVFNRGVNKARLKT 355 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSI-------NEDKKIVTKLQHAVELHKKSMSL 399 AE+ QE + + +T+L A KEV +AL S+ + + L+ AV+ K+ + Sbjct: 356 AEAQQQEAFYNFNKTLLTAGKEVSDALFSLESASLKETSRRNELRSLEKAVDFTKELLRY 415 Query: 400 -SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 S NY D+L E+ ++D + Q ++ + LY A+G G Sbjct: 416 SSATNY-------TDVLLSEQNLLNAQMDRIDDQLQQWQAVIALYRAVGGG 459 >gi|326388348|ref|ZP_08209944.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326207080|gb|EGD57901.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 475 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 105/458 (22%), Positives = 202/458 (44%), Gaps = 35/458 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIG-------NSKNLINIDTLK--WWESFNDTSLNKLVKIALQ 70 VGP+Y P ++ + G ++N D L WW F+D L+ L++ AL Sbjct: 22 VGPDYHVPPTAMVKAPAAQGPFVAAGPGTRN----DPLPDHWWRLFDDPRLDTLIETALA 77 Query: 71 QNLTI------LQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTNST 117 N + LQ T+ + +E V+ S+ +SH +T Sbjct: 78 ANTDLRVAEANLQRTQALLRDRETRRQVQGGFSAETEWTQRSAEQVLSHTQPSEKETYDL 137 Query: 118 GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + +DLFG R IE++ A+ ++A A D+ ++NV ++ + D + + + Sbjct: 138 G-LSVSYDLDLFGALHRGIEAASADSEAAQAARDLVRVNVAAETARDWADLCNAGHQADV 196 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 ++ + + L+ G + + + E+ +++ + +P L + R + ++ + Sbjct: 197 LRSVIARQEAGLALTRETVRHGRAAPYEIERRESMVETARARLPGLIAAQREALFRLTAM 256 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G P + + + IP+ G L+ RPDIR E++LA + A+IG+A Sbjct: 257 TGRPPAQADPSLLRCHTPLTLKQAIPVGDG--QALLARRPDIRLAERRLAATTARIGVAT 314 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + LYP +SL G+I T D P N ++ GP ++ ++ +++ I ++ + Sbjct: 315 AALYPDISLGGAIGSTGAATDMVSPLTN-RFTVGPSIHW-TLNRSGVRARIAATQAQGEA 372 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + TVL A++EVE ALT+ D L HA + + + + GR L Sbjct: 373 DLAAFDGTVLKALREVEVALTAYGADIDRQRDLAHARDDARDVAAHLGTLRKGGRIGGLP 432 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +R E ++ + L + L++A+G G+ Sbjct: 433 AVEADRDALLAEEAVAAGQATLNADQMRLFLALGGGWT 470 >gi|89902864|ref|YP_525335.1| RND efflux system outer membrane lipoprotein NodT [Rhodoferax ferrireducens T118] gi|89347601|gb|ABD71804.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodoferax ferrireducens T118] Length = 485 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 109/469 (23%), Positives = 209/469 (44%), Gaps = 26/469 (5%) Query: 2 NILR-AIFSLFIVLLAGCTVGPE-----YTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 NI R + +L +V+L C P P P+Q+ D +WW+ Sbjct: 9 NIARFTLATLAVVMLGACAGLPTPGDAVSNAPAATAAPSQWQAPLPHGGQLTDLARWWQQ 68 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR---FI 109 F+D L +L+ A + T+ A RI A+ +S A L P ++ +++ R + Sbjct: 69 FDDPLLTQLIDAAQAVSPTLASAQSRIAQARAARVSAAAALGPTLNANASAVRGRQDLSL 128 Query: 110 PNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 P T S G L + W++DLFG +++ A L A A A+++V +++ +Y+ R Sbjct: 129 PLGNTTSVG-LQAAWEVDLFGANAAARDAAQARLAGAQASWHDARVSVAAEVAGAYVSLR 187 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + ++ + L+ L G AT+ ++L + A + ++ T +++ Sbjct: 188 ACEAQLVQTQIDANSRADTARLTELAAKAGLQATASVALARASA---AQGRNLLTQQRAL 244 Query: 227 -RMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + V ++ L G + S QP + + IPAD++ RPD+ ++ Sbjct: 245 CDLGVKSMVALTGVAEPALRSQLAPASARLPQPAQIVVAS--IPADVLAQRPDLFSAARE 302 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGP-KLYLPIFDKGKIK 341 + + A + +++ YP + LNG+I +S WS GP + +P+FD G + Sbjct: 303 VLAASADLSQSQAQRYPRIVLNGAIGAARFSSAADTLDGPVWSLGPVSVVMPLFDGGARR 362 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A + E + + + A++EVE AL +++ + A E S + Sbjct: 363 ANVEAARARYVEAGVIYASRLRVAVREVEEALVALHSTAARGSDALVATEGFAASYRAAD 422 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R G SL ++ D R+ + + L +R+ +++ LY A+G G+ Sbjct: 423 ERFRSGLASLFELEDARRSAVQAQSALIELQRERVMAWISLYRALGGGW 471 >gi|327402147|ref|YP_004342985.1| NodT family RND efflux system outer membrane lipoprotein [Fluviicola taffensis DSM 16823] gi|327317655|gb|AEA42147.1| RND efflux system, outer membrane lipoprotein, NodT family [Fluviicola taffensis DSM 16823] Length = 478 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/446 (21%), Positives = 203/446 (45%), Gaps = 34/446 (7%) Query: 34 TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 T S S++ N + W + F D +L L+ AL+ N + + IN AK + + + Sbjct: 37 TPASYQGSQDSTNTSKVHWKDFFRDQNLIALIDTALKNNQELNIIMQEINVAKAEVRAKK 96 Query: 94 ADLFPSSYASIS-----------------------HRFIPNLKTNSTGQLDSDWKIDLFG 130 + PS+ ++ + P N ++ W+ID++ Sbjct: 97 GEYLPSAGLAVGAGLDKVGRYTRDGAVEENLPIKDGKAFPEPLGNFMVGFNASWEIDIWR 156 Query: 131 QRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 + R+ + A+ L + + + N+++++ SY + + ++ I Q L++ K + Sbjct: 157 KLRNGRDAAASRYLGTVEGK-NFMVTNLVAEISESYYELMAYDNKLMILTQNLEIQKNAL 215 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 E+ ++ G ++L++ K EAE+ +S + L + + ++ L+G F + Sbjct: 216 EIVKMQKIAGEVTELAVKKFEAEVYKNQSHLFYLRQQIVEAENRVNFLVG----RFPQPV 271 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 + S FQ + I GIP+ L+ NRPDIR E L S + +A+++ YPSL + Sbjct: 272 IRNSTAFQQMVPDTIYSGIPSQLLENRPDIRQAELNLVASKLDVKVARANFYPSLRITAG 331 Query: 309 IALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 + N N+ ++ L P+ ++ +K+ A++ + ++++T+LN Sbjct: 332 VGYQAFNVKYLINSPQSLLYNIAGDLVAPLINRNALKAKYFSAKAKQIQTVYSYEKTILN 391 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A EV N ++ I+ K Q V+ +S+++S ++ + +++L +R + Sbjct: 392 AYIEVVNRMSKIDNLKNSYDLKQQQVDALTQSITISTNLFKSAKADYMEVLMTQRDAIEA 451 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGY 450 + DL K++ + V +Y ++G G+ Sbjct: 452 KFDLVEIKQEQLSNMVSMYQSLGGGW 477 >gi|114800422|ref|YP_760807.1| RND efflux system outer membrane lipoprotein [Hyphomonas neptunium ATCC 15444] gi|114740596|gb|ABI78721.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomonas neptunium ATCC 15444] Length = 467 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 197/413 (47%), Gaps = 17/413 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + +L+ LV AL N ++ A + + + R+ L PS+ A+ +++ + Sbjct: 56 WWRLYQSEALDGLVTQALTNNRSLAGAAANLEQVRAGLSEARSALLPSTTATAGGQYVRD 115 Query: 112 LKTNSTGQLDSD---------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + + G +++D +++D+FG+ +E++ + +A A A L V + Sbjct: 116 -PSFAPGDVETDVYSLGFEMAYEVDIFGRVSSSVEAARQDAAAAEAAYRGASLMVAGETA 174 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 ++ID ++ A L ++ + L+ F G +L +V+ EA ++ E+DIP+ Sbjct: 175 RAWIDYCAGNIQLETAQSNYGLQEETLNLTRTLFDAGRGIRLDVVQAEAALRRAEADIPS 234 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + + ++ L G E + + P L + G A L+ RPD+R Sbjct: 235 VRAARDAALFRLARLTGQTPAEMSQAVPACES--MPQLVSLLPTGESATLLARRPDVRQA 292 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFDK 337 E +LA + A++GIA ++LYPS+S+ GS++ + F + GP + + Sbjct: 293 ELQLASAAARVGIATANLYPSVSIGGSVSTASLGGAGDMFSEDGLSFGLGPLISWNFPNV 352 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 ++ + AE+ + ET L A++E E ALT+ +K+ L+ + +++ Sbjct: 353 AAARARLAAAEAGVDIALANFDETFLTALEEAEIALTNYAAEKERYAALEASAAASEEAA 412 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ YR G + L++LD ER + L+ ++ A + +++++A+G G+ Sbjct: 413 ELARTRYRIGSDNFLNVLDAERTFIETRTALAQSEAAKASAEINVFMAMGGGW 465 >gi|58038826|ref|YP_190790.1| putative outer membrane drug efflux protein [Gluconobacter oxydans 621H] gi|58001240|gb|AAW60134.1| Putative outer membrane drug efflux protein [Gluconobacter oxydans 621H] Length = 514 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 105/476 (22%), Positives = 199/476 (41%), Gaps = 50/476 (10%) Query: 14 LLAGC---TVGPEYTKPHMPLLPTQFSIG--------NSKNLINIDTLKWWESFNDTSLN 62 L+GC VGP Y +P ++ +F + +L + WW FND LN Sbjct: 21 FLSGCIGGMVGPNYHRPKA-IISAKFKEAPPPPGWQMAAPDLAKMPKGDWWTIFNDPILN 79 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-------------- 108 L + N ++ + + A I S+RA LFP+ +S +F Sbjct: 80 DLEERVATSNQSLKEYEAQYRKAAATIDSIRAQLFPT----LSGKFSFNRNSEGGSTSNA 135 Query: 109 ---IPNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 IP + S T + W +D++G RR ++ +A + A V +L+ Sbjct: 136 SNGIPYTSSRSYTSNTWTTGPSASWTVDVWGMIRRQVQEQVAATQADAALVANMRLSYQL 195 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +L Y D R+ I++ + +DLY+ N+E+ + G S+++ ++S ++ Sbjct: 196 QLAQDYFDLRYQDSLIALYARNVDLYRHNLEILQNQLEAGVADPASVLQARYLLQSTQAS 255 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + H I+ L G E + + P P +P+ L++ RPD+ Sbjct: 256 LSNAHIARSQYEHAIAMLTGRAPAELTL-----APSPLPETIPPAPAAVPSMLLQRRPDV 310 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIF 335 E+ + A+IG +P ++L+ S + + WS G IF Sbjct: 311 AQAERNMEAYNAEIGYEIGAFFPQVTLSASYGYSGNPLQQLIQTATRTWSLGAAATETIF 370 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G + +R AE+ T+++TVL A+++ E+ ++ ++ + + AV+ + Sbjct: 371 EGGSRSAAVRSAEADYDNAVATYRQTVLAALQDTEDQMSGLHYLDQQLALQNAAVKSAEA 430 Query: 396 SMSLSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ +SM Y G ++ E+ A E LS+ ++Q V L +G G+ Sbjct: 431 AVQVSMNEYLAGTQIYTTVITAEQNALQYQETQLSVRQQQFLAE-VKLITDLGGGW 485 >gi|29348351|ref|NP_811854.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron VPI-5482] gi|253569280|ref|ZP_04846690.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29340255|gb|AAO78048.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron VPI-5482] gi|251841299|gb|EES69380.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 454 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 104/457 (22%), Positives = 204/457 (44%), Gaps = 41/457 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L+GC + +Y KP + P G +++ + + W E F D L L++ L+ N Sbjct: 15 LSGCGIYTKY-KPATSV-PDDLYGGEVVTEDTAGLGNMDWRELFTDPHLQSLIETGLRTN 72 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWKID 127 A + A+ ++S + P+ +A + + TN Q + + W++D Sbjct: 73 TDYQSAQLCVEEAQAVLMSAKLAFLPA-FALSPQGTVSSFDTNKATQGYSLPVTASWELD 131 Query: 128 LFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILDL 183 +FG+ R+ + L YAQ + + V ++LI +Y E++ I+ Q + Sbjct: 132 VFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLIISRQTEEA 188 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL Sbjct: 189 WKETVASTRSLMNAGLANESAVSQMEATYYQVQGSVLDLQQQINQVENSLALLLAETPRN 248 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + ++ +GIP ++ RPD+R E+ L + A+S YPS+ Sbjct: 249 Y-----ERGTLADQQFPTDFAVGIPVRMLAARPDVRSAERTLEAAFYGTNAARSAFYPSI 303 Query: 304 SLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L+GS T+ PG + G L P+F+KG++ + R A + +E + +Q Sbjct: 304 TLSGSAGWTNSVGSMILNPGKFLASAVG-SLTQPLFNKGQVVAQYRIARAQQEEAALGFQ 362 Query: 360 ETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +T+LNA EV +ALT+ + K VT LQ A+ +S SL M + L Sbjct: 363 QTLLNAGSEVNDALTAYQTSQGKRLLLDKQVTSLQTAL----RSTSLLM---EHTNTTYL 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L ++ ++ + +S ++LY A+G G Sbjct: 416 EVLTARQSLLSAQLSQTANHFTEIQSLINLYRALGGG 452 >gi|320324371|gb|EFW80450.1| outer membrane protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328506|gb|EFW84508.1| outer membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 469 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 115/466 (24%), Positives = 209/466 (44%), Gaps = 35/466 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LL GC + P+Y +P P+ LP S + + D + W F D L +L + Sbjct: 12 ALLTGCVNLAPDYQRPEAPVSSQWLPATASQPVASGSVPTD-IDWQNFFTDKRLIRLQTL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKSSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +++ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G E L + Q + + +P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHSLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L GS + + F + WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTANAGSASTSLSGLFTSGSGSWSFAPSISVPIFDGGSNRATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ YR Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELADALYRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 423 GSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|312889400|ref|ZP_07748953.1| RND efflux system, outer membrane lipoprotein, NodT family [Mucilaginibacter paludis DSM 18603] gi|311298095|gb|EFQ75211.1| RND efflux system, outer membrane lipoprotein, NodT family [Mucilaginibacter paludis DSM 18603] Length = 469 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 115/472 (24%), Positives = 216/472 (45%), Gaps = 53/472 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +++LA C V Y +P + + ++++ + L W F+DT+L L++ + Sbjct: 16 LIVLASCKVNQVYKRPDLKA-GGLYRDSSARDTSSAAVLPWRSLFSDTTLQGLIQEGISN 74 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASI------SHRFIPNLKTNS--------- 116 NL + A +I+ A ++ + +A PS A+I S + N + Sbjct: 75 NLNLQTAILKISEADASLRASKAAYLPSLDATIQATKAKSSQAALNFPAGTGINLNTITY 134 Query: 117 TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFK 171 L + W+++++GQ ++ +LAN Y + D AK V ++LI Y + Sbjct: 135 QASLSASWEVNIWGQLSSLKRQALAN----YLESDAAKRAVQTQLIADIANDYYNLLSLD 190 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++ + + + K++E + + ++V+ EA S E IP L++S R + Sbjct: 191 EQLRVTEETVKNRIKDVETMKVLKEGAIVNGAAVVQSEANRYSAEVSIPDLKQSIRETEN 250 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + LL P + + Q + Q +N G+ L+RNRPD++ E + Sbjct: 251 ALCILLARTPGPIKRNKLADQVPSGQ------LNAGLSTQLLRNRPDVQESEFAFRSAFE 304 Query: 291 KIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 +A S YP+L++ S L+ DNS ++ L PIF+KG+ K+ Sbjct: 305 NTNVAHSYFYPTLTITASGGLSSLQLKNLFDNSI-----FYNLVGGLTQPIFNKGQNKAR 359 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTKLQHAVELHKKSMSLS 400 A++ +E + T+Q+T+L A +EV NAL S +K+ K A+E KS+S + Sbjct: 360 YHIAQAQQKEAFNTFQQTILTAGQEVSNALYSYENAVSKQKLRAKQIQALE---KSVSYT 416 Query: 401 --MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ Y + D+L E++ ++ + Q ++ V+LY A+G G+ Sbjct: 417 NELLRYSSST-NYTDVLTSEQSLLAAQLSGVNDRLQELQAIVNLYKALGGGW 467 >gi|134294181|ref|YP_001117916.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134137338|gb|ABO53081.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 511 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 105/466 (22%), Positives = 203/466 (43%), Gaps = 43/466 (9%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW + D+ L+ L+ Sbjct: 27 GCAVGPDYHRPDTTIPAAFKEAPAGWKVAQPAD--RADRGPWWSVYGDSQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFP------SSYASISHRFIPNLK----------- 113 N TI Q+ A+ + RA FP S S + R + Sbjct: 85 SNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGTRSRTGRASSSGSSTFGGGSAIGN 144 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + S G LD+ W+ DL+G+ R++ + A +A A + A+L+ + L +Y R Sbjct: 145 SYSVG-LDASWEPDLWGKVSRNVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDA 203 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Y +++L+ ++ QG ++ +++ + +++S ++ + H Sbjct: 204 LQKLLDDTVKSYGDSLKLTQNQYAQGVAARADVIQAQTQLQSAQAASIDNGVARAQYEHA 263 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYI---PIN-IGIPADLIRNRPDIRYQEKKLADS 288 I+TL+G PA+ F + PN P+ + +P+ L+ RPDI E++ A + Sbjct: 264 IATLIGEPASTF---------SLPPNPLAEEPPVTPVDVPSALLERRPDIAAAERRAAAA 314 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +IG+A + +P+L+L+ S F W+ GP+L +FD G + Sbjct: 315 NEQIGVAIAAFFPTLTLSASGGFQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTD 374 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A ++ + ++ VL A ++VE+ L S + V + AV ++++++ Y+ Sbjct: 375 AARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAVASAEQALAIVTNQYK 434 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L++L + + L+ Q S V L A+G G++ Sbjct: 435 AGTVAYLNVLTAQTTAFTAQQKLATLGGQRMVSSVGLVKALGGGWD 480 >gi|330988878|gb|EGH86981.1| outer membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 469 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 115/468 (24%), Positives = 209/468 (44%), Gaps = 35/468 (7%) Query: 11 FIVLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 F LL GC + P+Y +P P+ LP + + D + W F D L +L Sbjct: 10 FSALLTGCVNLAPDYQRPEAPVSSQWLPATAGQPVASGSVPTD-IDWQNFFTDKRLVRLQ 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG----- 118 +AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 69 TLALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKSSIS 127 Query: 119 -----QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 128 HEYSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTL 183 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + + +A L +++ +L+ G +S L + + + ++S D+ + Sbjct: 184 AADNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQIL 243 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + + L+G E L + Q + + +P+ L++ RPD+ E L Sbjct: 244 QDRNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHSLKA 300 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + IG A++ +PS++L GS + + F + WSF P + +PIFD G ++ + Sbjct: 301 ANIDIGAARAAFFPSITLTANAGSASTSLSGLFTPGSGSWSFAPSISVPIFDGGSNQATL 360 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ Y Sbjct: 361 DSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELADALY 420 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 421 RGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|21242197|ref|NP_641779.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107616|gb|AAM36315.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] Length = 496 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 93/418 (22%), Positives = 187/418 (44%), Gaps = 21/418 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + D L+ L+ LQ + ++ A R++ A+ I S +A+ PS S + + Sbjct: 65 WWRALGDAQLDALIAEGLQHSPSLAAADARLHQAQARIGSAQAERGPSLSVSGGYTGL-Q 123 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 L + G+ LD + +DL+G +R E+++ +A A+LN+ Sbjct: 124 LPESMVGEELGGSYGGSAQVVLDFRYGVDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLS 183 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y + +A+ L +K +EL+ + + G S+L + + +A + + + Sbjct: 184 SAIAEGYAQLAYAWSLHDLANDELSRAQKTLELTRQRRSAGIDSELQVRQAQARVPAAQQ 243 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + ++ ++ L+G L + F + + +PADL+ RPD Sbjct: 244 QLQSAQQQIDEARTALAALVGQGPDRGLGIARP---VFGAGIATQLPSMLPADLLGRRPD 300 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPI 334 + ++ + I +AK+ YPSL+L + + + + FG P L LPI Sbjct: 301 VVAARWRVEAADKDIAVAKTRFYPSLNLTTLGGVINPDVGKLLESGSVFGLVAPALSLPI 360 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK+++N+ +++ + + V++A++EV + +T++ + AV+ Sbjct: 361 FDGGKLRANLAGSDAQYDLAVADYNQKVISALREVADQVTAVRSLELRAQAQNDAVQTAT 420 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S LD+L ++ ++ + Q + V L A+G G+ P Sbjct: 421 AAFDLAQQRYRAGIGSYLDVLSVQEQLLVARQRMAGLQSQQLLASVRLQRALGGGFTP 478 >gi|323528135|ref|YP_004230287.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323385137|gb|ADX57227.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 475 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 194/460 (42%), Gaps = 33/460 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT---------LKWWESFNDTSLNKLVKI 67 GCT+ P Y +P P+ T + T L W + F D L KL+++ Sbjct: 16 GCTLDPTYQRPAAPVDSTWSAAPAPAQPKAAQTTAAAPLAADLGWRDFFKDPRLQKLIEL 75 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTGQLD---- 121 AL N + A + + RA++ P S+ S++ + + + Sbjct: 76 ALANNRDMRVAALNVAEYEAQYRIARANIGPTISASGSVTRERVEGSTSAYSSSSASVGL 135 Query: 122 SDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + W+ID FG+ R+ +E LA D+A I ++I+ + Y+ + + I Sbjct: 136 TSWEIDFFGRLRSLKRQALEQYLAT-DAARTSTQI---SLIATVATDYLQLLSDEASLQI 191 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A +D + +L+ G+ S L + + E+ + S S + + ++ + +N+ Sbjct: 192 AQNTVDADQHTYDLTVSMMKMGSASLLDVRQAESSLASARSSLASYTRAAAQDRNNLVAE 251 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G P + L Q S N + I G+P+DL+ RPDI E L + A IG A+ Sbjct: 252 IGAPLPDDLP--QYPSLMESENTFADIGEGVPSDLLTRRPDIVEAEHTLKAANANIGAAR 309 Query: 297 SDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + P + L S T N F W+F P + +PIFD G ++ + A+ Sbjct: 310 AAFLPKIELTASAGTTSGSLSNLFKAGTGAWTFAPSISVPIFDFGYNRATLDVAKVEKDI 369 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++ + A KEV NAL V + V ++ L+ Y G S L Sbjct: 370 DIANYEKAIQTAFKEVSNALAGRTTYVTQVIADRDYVNSAQQYYDLAQARYHSGTDSFLT 429 Query: 414 ILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +LD +R TA+ ++ + +Q + + LY +G G+ Sbjct: 430 LLDAQRTLYTAQQQLVTDMLAKQ--SNLITLYKVLGGGWT 467 >gi|296115312|ref|ZP_06833951.1| outer membrane efflux protein [Gluconacetobacter hansenii ATCC 23769] gi|295978135|gb|EFG84874.1| outer membrane efflux protein [Gluconacetobacter hansenii ATCC 23769] Length = 470 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 104/458 (22%), Positives = 206/458 (44%), Gaps = 33/458 (7%) Query: 22 PEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESF-NDTSLNKLVKIALQQNLTILQ 77 P Y KP P+ + G K + D L+ W SF D + L+ AL+ N + Sbjct: 3 PHYHKPEAPV-ANGWPQGQGKGVAGQDASALLQDWRSFYRDPVMQTLIASALENNRDLRI 61 Query: 78 ATERINAAKENILSVRADLFP--------------SSYASISHRFIP-NLKTNSTGQLDS 122 A ++ AA A LFP S S+S P ++ + G S Sbjct: 62 AQQQAAAASSQFDIENAALFPTLNGTAGANIQKMNSHIWSLSRTDEPIYMRQYAVGFGIS 121 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQV---DIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DL+G+ R +S A+ D A +L++IS + + ++ + +++ Sbjct: 122 AYEVDLWGRIR--SASRASFDRYMASALNQQAMRLSIISSVATAMLNWVANNQALTVTQN 179 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +L+ + +L G ++L L + EA + E+ + + + ++ L+G Sbjct: 180 VLENRRHTYDLVKQTVEVGTGTQLDLAEAEASMHDAETSLQIYTRQRVEALDQLTLLVGT 239 Query: 240 PATEF-LHYMQKQS--NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P T+ + M ++ ++ P +P G+P+D+I RPDI E +L + IG A+ Sbjct: 240 PLTDATIRSMNTRTSLDSIAPFPVVPA--GLPSDMISRRPDIAASEGELRAANDDIGAAR 297 Query: 297 SDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 ++ +P + + NG+ + F W+ P++ LP+FD G++ + +++A + +E Sbjct: 298 AEFFPKIQITAANGTASNNITRLFQSGMGAWNVAPQITLPLFDAGRLTAQLKQAHARKRE 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + ++ T+ +A +EV +AL + Q +V +++ +L++ +R G L Sbjct: 358 EVARYERTIQSAFREVADALAGRETYLGQMVAQQASVAANQRQYTLALQRFRAGYDPYLA 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +RA ++ + Q + V LY A+G G+ Sbjct: 418 TLVAQRAWYTAQLAAITTQLQALSNTVTLYKALGGGWG 455 >gi|167576971|ref|ZP_02369845.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 494 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 102/473 (21%), Positives = 208/473 (43%), Gaps = 43/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMP---------LLPTQFSIGNSKNLINIDTL---KWWESFNDTS 60 L+ GC VGP++ +P P + F+ + + D WW F Sbjct: 26 ALVTGCAVGPDFVRPEPPRVDAYVPGGAVRASFAASGATQTLAPDAPFPDAWWRLFGSHD 85 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIP------- 110 ++ V A + T+ A + ++ +++ +P + A R++P Sbjct: 86 IDAAVDDAFAGSPTLAGAQATLRRSEHELMAGAGVFYPQADAQAGASRQRYVPLRTGANL 145 Query: 111 -----NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NL T ST + ID++G +RR++E A D+ + + A+L + + ++ + Sbjct: 146 PASIFNLFTLST---TISYAIDIWGGERRNVEGLAAQADAQHHALAAARLTLAANVVNTM 202 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + + I++ +++ L + L+ + + G ++ +++ L+A ++++ +P LE+ Sbjct: 203 IARAAYADEIAVTRELIALTDEQARLTRAQVSAGTSAYTAVLALDAARAALDASLPALEQ 262 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 ++TL G YPA M ++ +P + +P++L+R RPDI Sbjct: 263 KIGQADDLLATLAGRYPAERVPPGMSLA------DIALPARLPQTVPSELVRRRPDILQA 316 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKG 338 E L + A IG+A + L+PS++L S + + F WS G + P+F G Sbjct: 317 EAALHAASANIGVATAALFPSITLTASGSFNTVQLPSLFAAGGKAWSVGAGITAPLFRGG 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + A + E +++ VL+A +V + L +++ D + A+ + ++ Sbjct: 377 ALWYQRKAAIDAFDESSAAYRQVVLSAFAQVADTLRALDHDAAALEAQSRAMAAARDALR 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L I Y G L +L ++ + + A Q + V LY A+G G++ Sbjct: 437 LVTIEYETGAVGYLQVLAADQQYRQARLAWVQASAQRLQDTVALYAALGGGWD 489 >gi|218689285|ref|YP_002397497.1| putative outer membrane channel protein of an efflux system [Escherichia coli ED1a] gi|218426849|emb|CAR07701.2| putative outer membrane channel protein of an efflux system [Escherichia coli ED1a] Length = 457 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 101/456 (22%), Positives = 215/456 (47%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T + I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQDQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSMAN-GTGTTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSYTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAVTDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLAENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + L +F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFAPSVTLSLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQSQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|300704331|ref|YP_003745934.1| outer membrane protein [Ralstonia solanacearum CFBP2957] gi|299071995|emb|CBJ43325.1| putative outer membrane protein [Ralstonia solanacearum CFBP2957] Length = 516 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 104/474 (21%), Positives = 211/474 (44%), Gaps = 39/474 (8%) Query: 6 AIFSLFIVLLAGCT-VGPEY-----TKPHM----PLLPTQFSIGNSKNLINIDTLKWWES 55 A+ ++ + +LAGC +G + T P LP+Q S+N W + Sbjct: 28 ALSAIALAVLAGCADLGNAHSTQTLTSPEQLASAGTLPSQGGRWPSQN--------WVDQ 79 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF---- 108 FND L LV A+ + + A R+ A++ + R DL+PS RF Sbjct: 80 FNDPQLRALVDEAIHDSPKLQIAFARVRASRAMADTARGDLYPSVGLDAEMTRQRFSSYD 139 Query: 109 ----IP---NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 P N T S QL + +D +G+ R +ES+L++ + A+ A+L + + + Sbjct: 140 LFEGTPLGGNWVTESKIQLGVSYDLDFWGKNRAALESALSDDQAMEAESQAARLMLSTSV 199 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + +A +I+ ++ + LS + G +++ + A I + ++++ Sbjct: 200 ARTYAKLAALYAQRDVAERIIAQRRELVSLSGQRLRAGLDTQVETTQARANIAAAQTELE 259 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +++ + + ++ LLG L + + + Q +P ++ I DLI RPD+ Sbjct: 260 QVDELIALTRNQLAALLGKGPDRGL-AIARPTLLAQATPRLPDHLSI--DLIGRRPDLLA 316 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 ++ + + +AK+ P +SL G ++ +N G GP L LPIF+ Sbjct: 317 ARWRVEAAAKNVDVAKAQFLPDISLTAFLGLASIAPENLLLGNARQLGIGPALRLPIFEG 376 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 GK+++N+R +S ++ +T+ A+ + + +TS++ + + A+ +++ Sbjct: 377 GKLRANLRGKYASYDAAVASYNQTLTEALHDTADQITSLHSVDTQIDIQRTALAEAERAY 436 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 SL+ Y G + L +L+ E ++ + + + + L A+G GY Sbjct: 437 SLARTRYGAGLGTQLTVLNAESTVLLQRRLAALLQARRLDAQMALIKALGGGYT 490 >gi|283955161|ref|ZP_06372663.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 414] gi|283793374|gb|EFC32141.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter jejuni subsp. jejuni 414] Length = 492 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 115/465 (24%), Positives = 199/465 (42%), Gaps = 35/465 (7%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGN-------SKNLINIDTLKWWESFNDTSLNKL 64 +L++ C++ P P +SI N K N WW+ F+D +LNK+ Sbjct: 14 CLLISACSLSPNLNIPE-----ANYSIDNKLGALSWEKENNNSIAKNWWKDFDDENLNKV 68 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQ-- 119 V +AL+ N + A + A + + L P S S + N +N TG+ Sbjct: 69 VDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKLDGSASGSRAKTAINAPSNRTGEVS 128 Query: 120 --------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L+ ++IDL+G+ R +S + ++ + A+L+VIS + +Y + + Sbjct: 129 YGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKASEYDYEAARLSVISNTVKTYFNLANA 188 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E + + + K+ ++ KF GA + L + A ++S+ ++N Sbjct: 189 YENENTLKEAYESAKEIYRINDEKFQVGAIGEYELAQARANLESM----ALQYNEAKLNK 244 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQP-NL-YIPINIGIPADLIRNRPDIRYQEKKLADS 288 N L + L+ + ++ +Q NL I GI + ++ RPDI +KL Sbjct: 245 ENYLKALKILTSNDLNDILYKNQAYQVFNLKEFDIPTGISSTILLQRPDIGSSLEKLTQQ 304 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 IGIA++ PSLSL G + D + WS G LPIF G+I N+ Sbjct: 305 NYLIGIARTAFLPSLSLTGLLGFESGDLDTLVKEGSKTWSIGGNFTLPIFHWGEIYQNVN 364 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ + E ++ +Q T++ A E+ AL + + Q + + +KK ++ Y Sbjct: 365 LAKLNKDEAFVNYQNTLVTAFGEIRYALVARKTLRLQYDNAQASEQSYKKIYKIAKERYD 424 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL D L+ + V + K A S VD+ A G G+ Sbjct: 425 IGEMSLQDYLEARQNWLNAAVAFNNTKHSYANSIVDVIKAFGGGF 469 >gi|189465472|ref|ZP_03014257.1| hypothetical protein BACINT_01825 [Bacteroides intestinalis DSM 17393] gi|189437746|gb|EDV06731.1| hypothetical protein BACINT_01825 [Bacteroides intestinalis DSM 17393] Length = 454 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 207/466 (44%), Gaps = 45/466 (9%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLNKL 64 ++ +LL+ C + YTK P + T G ++ +I +L W E F D L L Sbjct: 8 LAVATLLLSSCGI---YTKYERPEIKTDGLYGQDVEVEDTTSIASLSWRELFTDPQLQSL 64 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL 120 ++ ALQ N + A RI A+ + S R PS +S +G Sbjct: 65 IEHALQGNTDLQSAQWRIKEAEATLSSARLAYLPSFMLTPQGGVSSFDKSKGSWTYSGIA 124 Query: 121 DSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + W+ID+FG+ RR L +L+ Y Q L I+ + Y + + Sbjct: 125 SASWEIDIFGKLTNAKRRAKALYLQSLE--YEQAVTTSL--IANVANMYYTLLMLDAQYN 180 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 ++ + ++++++ G T + + + EA +E+ + L++ R +++S Sbjct: 181 VSAETAAKWRESVKTMRAMKAAGMTDEAGVAQTEANCYMVEAALLDLKQQIREIENSLSI 240 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG + + + Q +F L +G+P L+ RPD++ E LA + A Sbjct: 241 LLG-DVPDAIERGKLQGQSFPEEL----TVGVPLQLLSRRPDVKSAELSLAQAFYSTNAA 295 Query: 296 KSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +S YPS++L G+ T+ PG + G L P+F++G + ++ A++ Sbjct: 296 RSAFYPSITLGGTAGWTNSAGSMIINPGKLLLSAVG-SLTQPLFNRGLNMAQLKIAKAQQ 354 Query: 352 QEQYITWQETVLNAIKEVENALTSIN--------EDKKIVTKLQHAVELHKKSMSLSMIN 403 +E +++Q+ +LNA EV NALT + D +I T L+ AV +S L M Sbjct: 355 EEAKLSFQQALLNAGSEVNNALTQVQVARGKTELRDGQI-TSLETAV----RSTQLLM-- 407 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L +++ ++ + + ++LY A+G G Sbjct: 408 -KHGNSTYLEVLTAQQSLLSAQLTQIADRFDEIQGIINLYQALGGG 452 >gi|149926051|ref|ZP_01914314.1| outer membrane efflux protein [Limnobacter sp. MED105] gi|149825339|gb|EDM84550.1| outer membrane efflux protein [Limnobacter sp. MED105] Length = 481 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 100/457 (21%), Positives = 206/457 (45%), Gaps = 25/457 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 I LL TV PE +P +P + +I WW D+SL +V+ AL+ Sbjct: 25 IPLLDRFTVKPE--QPVEVAVPENV---KGVGMKDIQNEAWWSLLGDSSLVAVVEQALKN 79 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNS---TGQ-------- 119 N + A ER+N A + ++ +PS + S R P+ N GQ Sbjct: 80 NTDVRLANERLNEAGAVLGIAKSQQWPSIFGQFTSGRNRPSQAGNVPVFGGQNVYESNQI 139 Query: 120 -LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L + W++DL+G+ +E ++ A+ V A+L+V + + R + ++ + Sbjct: 140 GLGASWELDLWGRIGALEDAARASFMQQGYNVRGARLSVAATAASLHTQVRVLRLQVKVL 199 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q L+ +L+ ++ G +++L L + EAE+ ++ + +P + + ++ ++ Sbjct: 200 EQTLESRDAAYKLAKQRYDVGLSNELQLRQTEAELLAVRAQLPDTREQLSRAENALAVIV 259 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G T L + + N +P N P++L+ RPD+ E++L A + A+ Sbjct: 260 GGN-TPALPPLGVDNLNLTSIFILPENT--PSELLLRRPDLAAAEQQLLAGEANLEAARK 316 Query: 298 DLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P++ L G + + F G WSF ++ PIF G++ + A + + Sbjct: 317 AFFPTIGLSAFGGRESADLSDLFTGPAKIWSFQSQITQPIFQAGRLTNERDAAIARRNQA 376 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + ++ +V A +E+ +A+ + E ++ + Q V+ + + L+ + G + L++ Sbjct: 377 VLQYEASVRTAFQEIYDAIVAQREARERLQARQEQVQTLTQVVRLAQLRVDNGVANQLEL 436 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD +R ++ + A + + + + A+G G+N Sbjct: 437 LDAQRNLLNAQLSWAAAWQSQQGATLAMIRALGGGFN 473 >gi|330814991|ref|YP_004358696.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily protein [Burkholderia gladioli BSR3] gi|327367384|gb|AEA58740.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily protein [Burkholderia gladioli BSR3] Length = 511 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 99/457 (21%), Positives = 204/457 (44%), Gaps = 36/457 (7%) Query: 21 GPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GP+Y +P + + P + + + D WW + D L+ L+ N T Sbjct: 31 GPDYHRPEVSVPASYKEAPEGWKVAQPDD--RSDRGPWWGIYQDPQLDDLMSKLNTANQT 88 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH----------RFIPNLKTNST---GQLD 121 + Q A+ + RA FP+ S + +TNST LD Sbjct: 89 VAQFAAAYRQARALVAEARAAYFPTVGVSAGGTRSGSPGGTVQGFKTGRTNSTSYNAGLD 148 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DL+G+ R + S A +A A + A+L+ L +Y R + Sbjct: 149 ASWELDLWGKVSRSVSSQKAGEQAAAADLANARLSAQGTLAQTYFQLRETDAAQKLLDDT 208 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + +++++ L+ ++ QG ++ +++ + +++S ++ + H I+TL+G P Sbjct: 209 VASFQRSLTLTQNQYAQGVAARSDVIQAQTQLQSAQASAINNGIARAQYEHAIATLIGVP 268 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A+ F + +P + +P+ ++ RPD+ E++ A + +IG+A + + Sbjct: 269 ASSF--SLAPMPLTAEPPRTPAV---VPSAILERRPDVAAAERRAAAANEQIGVAIAAFF 323 Query: 301 PSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 P+L+L+ S + S P + W+ GP+L +FD G + A ++ + Sbjct: 324 PTLTLSASGGVQSSAWSQLFSLP--SRVWTVGPQLAATLFDAGLRSAQTEAARATYDQNV 381 Query: 356 ITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ++ VL+A ++VE+ L S+ +++IV + Q AV+ ++++ + Y+ G + + Sbjct: 382 AEYRAAVLSAFQDVEDNLASLRILEQEIVVQRQ-AVDSARRALDIVTNQYKAGTVDYVSV 440 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L + E L + S V+L A+G G++ Sbjct: 441 LTAQTTAFNAEQQLVVLNGNRMVSSVNLVKALGGGWD 477 >gi|167568189|ref|ZP_02361063.1| outer membrane efflux lipoprotein [Burkholderia oklahomensis C6786] Length = 502 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 207/460 (45%), Gaps = 38/460 (8%) Query: 20 VGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 VGP+Y +P + P + I + D WW ++D LN L+ N Sbjct: 30 VGPDYHRPDAAIPAAYKEAPPGWKIAQPAD--RADRGPWWTIYDDPQLNALIDKLNTSNQ 87 Query: 74 TILQATERINAAKENILSVRADLFPS------------------SYASISHRFIPNLKTN 115 T+ Q A+ + RA FP+ S + + R I N T Sbjct: 88 TVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSSSSASRSTTRTIGN--TY 145 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S G LD+ W+ DL+G+ R + + A+ +A A + A+L+ + L +Y R Sbjct: 146 SVG-LDASWEPDLWGKVSRTVGAQKASEAAAAADLANARLSAQATLAQTYFQLRAADATQ 204 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+ Sbjct: 205 KLLDDTVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQASAIDNGIARAQYEHAIA 264 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 TL+G PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +IG+ Sbjct: 265 TLVGEPASTF--SLSPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGV 319 Query: 295 AKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 320 AIAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATY 379 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + T++ VL+A ++VE+ L S ++ + + AVE + ++ +++ Y+ G Sbjct: 380 DQDVATYRAAVLSAFQDVEDNLASQRILEQEIGVQRQAVESAQHALDITLNQYKAGTVGY 439 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L + LS Q S V L A+G G++ Sbjct: 440 LNVLTAQTTAFSARQKLSTISGQRMVSSVGLVKALGGGWD 479 >gi|167588982|ref|ZP_02381370.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 407 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 171/353 (48%), Gaps = 18/353 (5%) Query: 110 PNLKTNSTGQL--DSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 P + + T +L D+ W++D+FG RR IES+ A +D+ ++++++L Y + Sbjct: 45 PGIGQSRTYRLGFDASWELDIFGGTRRAIESADAQVDAIDDDRHAVLVSLLAELASDYAE 104 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R + R+ IA + L+ G + + + AE++ ++ +P L+ + Sbjct: 105 LRATQARLQIATDNVASLDATRRLTERSERHGLGTSFEVAQARAELELAQAVLPPLQANV 164 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQE 282 H I L G F ++ N P +P+ + +P+D+IR RPDIR E Sbjct: 165 ARLTHAIGVLTG----GFPGALRDALNA--PGATLPVAPQLPVTLPSDVIRERPDIRAAE 218 Query: 283 KKLADSVAKIGIAKSDLYPS----LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 ++ A + A+IG+A++ +P LSL + +L D F + WS + ++D G Sbjct: 219 RRFAAANAQIGVARAAQFPQFAIPLSLGTTASLVQD-LFTSASVAWSIALEGTQTLYDGG 277 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K+ + A + A+ + +++ + A +EVE+AL I ++ L AV + + S Sbjct: 278 RAKAGVSAARAGAEAARLAYEQRIRVAFREVEDALAEIYAERDRQAALVAAVGSSQDAQS 337 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G L +L +RAT + L+++K + + LY A+G+G+ Sbjct: 338 RATRLYRNGLSEYLSVLIAQRATYRARDALALSKLAQVQGVIALYKALGAGWR 390 >gi|58582000|ref|YP_201016.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426594|gb|AAW75631.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 1524 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 110/490 (22%), Positives = 200/490 (40%), Gaps = 52/490 (10%) Query: 1 MNILRAIF--SLFIVLLAGCTVGPEYTKPHMPLL---------------------PTQFS 37 M LR+ S V LA C VGP++ +P P QF Sbjct: 1031 MTHLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFE 1090 Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 G WW +F+ LN +V+ AL+ N + A + A++ + + R Sbjct: 1091 PGQEV------PAAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWL 1144 Query: 98 PSSYASIS-----HRFIPNLKTN-------STGQLDSDWKIDLFG-QRRHIESSLANLDS 144 P + + + +P T QL + +D+FG RR +E++ A + Sbjct: 1145 PQADLHVDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQA 1204 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 Q D A L++ + ++ + I + ++ A + + ++ L+ + T GA Sbjct: 1205 QRDQRDAAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQ 1264 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-- 262 ++ + ++ +P LEK ++ L G +E ++ + L +P Sbjct: 1265 VLAQRTALAQAQATVPPLEKQLEQQRTLLAILGGQVPSE----AADEAFTLE-TLQLPAQ 1319 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPG 319 + + +P+ L+ RPDIR E + + A IG+A + PS++L+ + + F Sbjct: 1320 LPLSLPSQLVEGRPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAA 1379 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 NT WS L P+F G + R AE+ + ++ VLNA EV NALT++ D Sbjct: 1380 GNTQWSLAGSLLQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSD 1439 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + + A L +++++ G + D+L ++A + A+ Sbjct: 1440 AQSLRACADAQALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDT 1499 Query: 440 VDLYIAIGSG 449 V LY A+G G Sbjct: 1500 VALYQALGGG 1509 >gi|209543601|ref|YP_002275830.1| NodT family RND efflux system, outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5] gi|209531278|gb|ACI51215.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter diazotrophicus PAl 5] Length = 469 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 211/473 (44%), Gaps = 39/473 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLKWWESFNDTS 60 R + L ++ A C + P Y P P+ P F + L ++ WW F+D Sbjct: 9 RVLMLLAAMVPAACDLAPRYAPPVAPV-PASFKERDGWALAVPGDDVPKGPWWRIFHDPV 67 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISHRFIPNLKT 114 L+ L N + A + + A+ + + +A +P S+ S R N+ Sbjct: 68 LDALEDRVTIANQDLRVAVAQYDEARADARTAQAGYYPTLDFTGSASRSGLSRETANVFN 127 Query: 115 NSTGQ-----LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ST LD +++D++G+ R+ ++ A ++ + L++ ++L Y R Sbjct: 128 KSTFNSYSLGLDLQYEVDVWGRVRNTAKAGRARAQASAGDLATVDLSLHAELATDYFTLR 187 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++ Q + Y+ + L+ +F G ++ + A++ + + M Sbjct: 188 GYDAMQAVLDQTVGNYRHALALTQAQFDVGYAAQPDVSAATAQLDGLLTQAADNRLRRAM 247 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L G P F + +S + P PI G+P L++ RPDI E+++A + Sbjct: 248 LEHAIAILTGQPPATFA--VAARSLDSAPP---PIAPGLPVALLQRRPDIAAAERRVAAA 302 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A++ +P+ ++N G A ++ WSFGP+ L +FD G+ + Sbjct: 303 NADIGVARAAYFPAFNINAMMGVQAAMPNHLLVAPAQAWSFGPEALLNVFDGGRRAALNA 362 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSMS 398 A + E+ +++TVL+A ++VE++L S+ ++ V Q A + + Sbjct: 363 HARAVYDEEVARYRQTVLDACRDVEDSLVSLRRLAEESATQQQAVIAAQDATHRAGELNT 422 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +Y Y+++ +IE + EVD+ + R++ S V L A+G G+ Sbjct: 423 GGLASY----YNVILARNIELSDRLSEVDIRV--RRMTAS-VALIKALGGGWG 468 >gi|326389055|ref|ZP_08210637.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326206655|gb|EGD57490.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 475 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 96/427 (22%), Positives = 184/427 (43%), Gaps = 41/427 (9%) Query: 17 GCTVGPEYTKPHMPLL--PTQFS-----IGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GC++ P KP + P F+ + L D +WW F D L+ L A Sbjct: 15 GCSLAP---KPRSLAISTPDTFAETPANWAQATPLDGSDRGEWWAGFGDPVLDDLETRAA 71 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNSTGQLDS----- 122 + + T+ A R A+ + A P + AS + + + S G + Sbjct: 72 KASPTLEAALARREEARAVLHQQAAQYLPEIDATASAARNRVARDRPLSAGHSATYDDYR 131 Query: 123 -----DWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERIS 175 +++DL+G+ R+ + A +S + D+A +L++ + + +Y R Sbjct: 132 IGSQLSYEVDLWGRVRN-SVAAARAESKASDADLASIRLSLQASVADAYARLRGLDAEED 190 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + ++ Y + ++L+ + G + L + + + + + + H ++ Sbjct: 191 LLIRSVEAYTRALDLTRKRHEGGVATGLDENRARTVLGNARAQVSDVAAQRAATEHELAA 250 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G A+ F P + + +G P+ LI+ RPDI E+++A + A+ Sbjct: 251 LVGEVASGF---------RIAPVPRVVDAPAVPVGTPSTLIQRRPDISAAERRVAAANAR 301 Query: 292 IGIAKSDLYPS--LSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAE 348 IG+A++ L+P+ L L G T N W+ GP + PIFD GK + +R A Sbjct: 302 IGVARAALFPTVTLGLAGGFESTGSGLLSSPNAFWALGPLGVSAPIFDAGKRIAGVRLAR 361 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + E ++ +VL A +EVE+AL + + K + A E + S L+ YR+G Sbjct: 362 AQLDEAAANYRTSVLTAFREVEDALAAARQLKLEAVDQKAAAEAAEASSRLAFTRYREGA 421 Query: 409 YSLLDIL 415 + +++ Sbjct: 422 ANYFEVV 428 >gi|52425359|ref|YP_088496.1| TolC protein [Mannheimia succiniciproducens MBEL55E] gi|52307411|gb|AAU37911.1| TolC protein [Mannheimia succiniciproducens MBEL55E] Length = 467 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 109/422 (25%), Positives = 195/422 (46%), Gaps = 28/422 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW ++N L L++ LQQNL + A R+ A+ N ADL PS AS S Sbjct: 50 QWWRNWNYPQLTALIEQGLQQNLEVAMARSRLAEAQANAAYTDADLGPSVSASGSASGSR 109 Query: 111 NLKTN-------------STGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 N + + W++D FG++R +++ A SA QV A++ V Sbjct: 110 ARVDNPLTGGSSTSSGSYQYAAVTASWELDFFGKKRSDRDAAEAQALSAQDQVYAAQMLV 169 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ SY + ++R ++ Q D+ K +F G + +++ E+ + SI+ Sbjct: 170 AGQIAESYFNIAALQQRQAVLQQYADVLGKLKTYVQGRFNAGQANANDVLQTESRLSSIQ 229 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNR 275 +++ T + N I+ L G PA F + N NL P + +P +++ R Sbjct: 230 ANLATFDSQIDSNRRAIAILTGKPAQGF--RLSPAVKNPLINLPAAPAGV-LPGEVLARR 286 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHD-NSFPGYNTHWSFGPK 329 PD+ ++ + AK+ AK+DLYP + G I + D + G+ S G Sbjct: 287 PDLHSYRNQVQAAAAKLASAKADLYPRFDIQFMGGTGRIDVNSDISELKGWAGLVSGG-- 344 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIF G+I++NI A++ + + + + ++ A+ +V+N+ + + + LQ A Sbjct: 345 ISLPIFTNGRIQANIDVADARLKTALLQYDKALIQALADVDNSYQAQFALNRQIRLLQTA 404 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATA-KVEVDLSIAKRQLAKSYVDLYIAIGS 448 +KS + ++ G +L + L ER A + L A+ AK+ V LY A+G Sbjct: 405 AAQTQKSAVNAEKLFQYGEKTLDNTLS-ERINALNAQEQLIQARLTHAKNLVSLYKALGG 463 Query: 449 GY 450 G+ Sbjct: 464 GW 465 >gi|270261920|ref|ZP_06190192.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] gi|270043796|gb|EFA16888.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] Length = 484 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 103/469 (21%), Positives = 207/469 (44%), Gaps = 31/469 (6%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPL---LP--TQFSIGNSKNLINIDTLKWWESFND 58 R I F +LLAGC ++ P+Y +P P+ LP ++ + K ++ + W + D Sbjct: 4 RLITLTFPLLLAGCISLDPDYQRPQAPVPANLPQGAAYATPSGKLSLSYPDIPWRDYVVD 63 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG 118 L ++V + L + + +A I +A+ R++LFP+ A + +L N Sbjct: 64 ARLRQVVAMGLSSSRDLREAIANIESARALYGEQRSELFPTINAGVDGTRSRSLTGNGNA 123 Query: 119 QL----------DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYI 165 S +++DLFG+ R + S A ++ A+ + AK L +I+ ++ ++ Sbjct: 124 TAISQSYEASAGTSSFELDLFGKNRSL--SRAKFETYLAESEAAKSTRLTLIADIVTDWV 181 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + ++ A ++ + ++E++ G S + + + + SD+ + S Sbjct: 182 NVAAERSLLAAAKDTMESARLSLEVTRKNQQNGILSMVDVASADTVYQQARSDVASYTTS 241 Query: 226 FRMNVHNISTLLGYPATEFL--HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++G E L + ++ S + +P N+ + ++ NRPD+ E Sbjct: 242 AAQAKNALDLVVGQSVPESLLPNGIEALSGIMKD---MPANVS--SQVLLNRPDVLEAEH 296 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A IG A++ +PS+SL S + + F WSF P + LPIF G Sbjct: 297 NLKSANASIGSARAAFFPSISLTASGGVGSGELSSLFSKGAGVWSFAPSISLPIFTGGYN 356 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 S + ++ T+++ V A +E +AL + + V ++ L+ Sbjct: 357 TSQLNYTKAQKDLYVATYEKAVQTAFQETADALARKGTIGEQLAAQTGYVAASREYYRLA 416 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + YR G + L++LD +R L A++ ++ + LY +G G Sbjct: 417 ELRYRHGVDTYLNMLDAQRTLYTARQSLISAQQTEYQNLITLYKVLGGG 465 >gi|194446968|ref|YP_002038988.1| EtsC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194358720|gb|ACF57163.1| EtsC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|301130397|gb|ADK62198.1| putative transport system outer membrane protein EtsC [Salmonella enterica subsp. enterica serovar Kentucky] gi|301130526|gb|ADK62326.1| putative transport system outer membrane protein EtsC [Salmonella enterica subsp. enterica serovar Kentucky] Length = 456 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 217/464 (46%), Gaps = 27/464 (5%) Query: 1 MNILRAI-FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKW-WESF 56 M IL ++ L L +GCT + +Y P + + I +K ++ +T + WE F Sbjct: 1 MKILSSLTLCLITALCSGCTNVLKSDYRAPEV-----NYPINWTKGDVDGNTSPFDWEEF 55 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 ND +L+ + + + N I A RI+ A+ + P+ A++S L +S Sbjct: 56 NDPNLDNWLHLVMTSNNDIAIAALRIHRAQLDAERTGITNTPALKAALSMDGKKQLNNSS 115 Query: 117 ------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + L + +++DL+G+ R + + + ++ A+L ++S+ +Y Sbjct: 116 GWAKSGSASLGTSYELDLWGKIARQRDVAEWAVHASEEDFRSARLMLLSEASNNYWRIGF 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++I+ Q +D K+ + L+ +++ G S L ++ + + + E+ + L++ Sbjct: 176 VNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLDVIDAQQNLLTQENQLTGLQREHSQL 235 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 ++ + LLG P + + P +P +N IPA ++ RPDI +E +L + Sbjct: 236 LNQQAVLLGTVPGCQIVEPTTL------PKGSLPKVNANIPASILMRRPDISAKEWQLRE 289 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++A + I +S+ YP+ +L G++ T S +N S G L LP + + ++ Sbjct: 290 ALATVDIKRSEYYPTFNLTGALG-TSSASLLALLHNPVGSVGANLTLPFLEWRQRDIEVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + +++ + +++ + A+ +E+AL+ N+ T+L+ +EL +KS L+ + YR Sbjct: 349 IARNDYEQRMLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNEVRYR 408 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + LD + + E+ L + ++ +Y+ G Sbjct: 409 HGAVRISFWLDAQEKRRQAELRLDENRFNQLQNLAKIYLEFGGA 452 >gi|114569028|ref|YP_755708.1| RND efflux system outer membrane lipoprotein [Maricaulis maris MCS10] gi|114339490|gb|ABI64770.1| RND efflux system, outer membrane lipoprotein, NodT family [Maricaulis maris MCS10] Length = 471 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 113/440 (25%), Positives = 195/440 (44%), Gaps = 32/440 (7%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 +P P +S G+ + W S D L L+ A N T+ Q+ R + A+ Sbjct: 34 LPTAPVAWSAGSGDAGAEL-ARDWVASMQDERLTALIDAAFAGNPTLAQSLARFHGAQAA 92 Query: 89 ILSVRADLFPSSYASISH-RFIPNLKT--NSTG-QLDSDWKIDLFGQ-RRHIESSLANLD 143 A P AS S+ R PN+ + NS G L + W+ DL+G R + +S N D Sbjct: 93 ARVDGARYMPQLDASASYQRSQPNVGSGSNSYGLGLSASWESDLWGALRDNARASGLNAD 152 Query: 144 SAYAQVDIAKLNV---ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 +A + A+L++ ++K S I+AR E +A + + + +++L+ +F +G Sbjct: 153 AAAEDLRAAQLSIAGLVAKGWFSLIEARLQTE---LAERDVATRQSSLDLTERRFARGLV 209 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNL 259 + + + S E+ + + +++ + ++ TLLG YP S + P Sbjct: 210 RSSDVRTARSALSSSEAALASRQRAEAASARSLETLLGRYP-----------SASLAPEA 258 Query: 260 YIPI-----NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 P +G P DL+ RPD+R E +L + + A L PSLSL GS L Sbjct: 259 DFPAFDELGGLGSPVDLLTRRPDVRAAEDRLDAAGLQSQAAAKALIPSLSLRGSSGTGGL 318 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F S L PIFD G + + + ++A+ ++ TVL A +E EN Sbjct: 319 DVADMFDLDTLVSSLTASLVAPIFDGGSLIAQRDQVYANAEGLVASYVATVLTAWQEAEN 378 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A+ + V L+ A E + L + Y +G ++ ++L + E A Sbjct: 379 AIHGDAILAQRVENLREAYEEAAAAEDLVIREYARGVSTIFELLTAQSRRISAESQYISA 438 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R+ A + VDLY+A+ ++ Sbjct: 439 RRERATNRVDLYLALAGDFS 458 >gi|330992752|ref|ZP_08316696.1| Solvent efflux pump outer membrane protein srpC [Gluconacetobacter sp. SXCC-1] gi|329760230|gb|EGG76730.1| Solvent efflux pump outer membrane protein srpC [Gluconacetobacter sp. SXCC-1] Length = 524 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 114/483 (23%), Positives = 215/483 (44%), Gaps = 46/483 (9%) Query: 4 LRAIFSLFIVL-LAGC-TVGPEYTKPHMPLLPTQFS--------IGNSKNLINIDTLKWW 53 LR SL L+GC VGP Y P P++ +F + ++ I KWW Sbjct: 25 LRGTTSLLAAFTLSGCLMVGPRYKHP-APVISARFKELQPAPGWTVSQPDMAAIPKGKWW 83 Query: 54 ESFNDTSLNKLV-KIALQ-QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 +ND +LN L ++AL QNL +A R A+ + + +A L+P+ +S F N Sbjct: 84 LVYNDPTLNALEDQVALSNQNLKEYEAQYR--KARAMVNAAKASLYPTLSGDLS--FARN 139 Query: 112 ------------------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 + +L +DW +DL+G+ RR I+ + ++ A + A Sbjct: 140 SQGSTATSTSGTTYSTGSTRNTYAAELSADWDLDLWGKIRRQIQEQVTAAQASAADIANA 199 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L+ S+L Y + R+ + S+ Q LY N+E+ + G + ++ E E+ Sbjct: 200 RLSYQSQLAQDYFEMRYEESLKSLLDQSAALYAHNLEIIRNQHEGGTLNAGDELQAETEL 259 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + + + H I+ L+G + + P+ + + +PA L+ Sbjct: 260 QQTRASATATDVARSEYEHAIAVLVGRAPADLTI-----ARAAMPSAIPAVPVTLPATLL 314 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPK 329 + RPDI E+ + + A+IG A + YP ++L+ + + + + N WS G Sbjct: 315 QRRPDIAAAERGMVEYNAEIGAAIAAFYPDVTLSAAYGYSGNPVQSLIQVANRIWSLGAA 374 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 +F+ G + ++ A + T+++TVL A+++ E+ L+S+ ++ + A Sbjct: 375 GSETLFEGGARTAAVQEANADYDNAVATYRQTVLTALQDTEDQLSSLRILEQQAGQQDAA 434 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V K++ ++M YR G ++ ++ A E L I + +L S V L +G Sbjct: 435 VRAAVKAVDVAMNEYRFGTAIYTTVITTQQTALGDQESALQIQENRLLAS-VKLIADLGG 493 Query: 449 GYN 451 G++ Sbjct: 494 GWD 496 >gi|301017623|ref|ZP_07182297.1| putative outer membrane efflux protein OprM [Escherichia coli MS 69-1] gi|300400117|gb|EFJ83655.1| putative outer membrane efflux protein OprM [Escherichia coli MS 69-1] Length = 457 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 97/425 (22%), Positives = 203/425 (47%), Gaps = 22/425 (5%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLEPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + + + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSE-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV +A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVL 418 Query: 416 DIERA 420 +R+ Sbjct: 419 TAQRS 423 >gi|255531155|ref|YP_003091527.1| NodT family RND efflux system outer membrane lipoprotein [Pedobacter heparinus DSM 2366] gi|255344139|gb|ACU03465.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter heparinus DSM 2366] Length = 460 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 114/463 (24%), Positives = 198/463 (42%), Gaps = 43/463 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + LA C + Y +P + ++ NI ++ W + F DT L L+ L +N Sbjct: 12 ITLASCRISKPYQQPEFDT-GKLYRDAEGRDTTNIVSVHWNKFFGDTILTGLIAEGLSRN 70 Query: 73 LTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT----NSTGQLD----S 122 + + A +RI+AA+ N +A P + ASI + + NS+ Q D + Sbjct: 71 IDMKIALQRIDAARANFQQSKAAFLPDLNGNASIKQSKLAFPQGFGLINSSTQYDIGLSA 130 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+ D++G+ + + S+LA L + +I+ + Y +++ + Q + Sbjct: 131 SWEADIWGKLKSTKRSALAGLLQTEEARKAVQTQLIADIANRYFTLLALDQQLQVLEQTV 190 Query: 182 DLYKKNIE----LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + K ++ L GA V+ EA + E +P L+K R + ++ LL Sbjct: 191 NNRKTDVRTMKALKAANIVNGAAE----VQSEASQYAAEVAVPRLKKQIRETENALNILL 246 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P + S+ + L I + GIPA L++NRPDI+ E + A+ Sbjct: 247 ARPPSAIYR-----SSLDEQQLLIDLKAGIPAQLLQNRPDIKQAEYAFMAAFENTNAARK 301 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YPS +L + T + FG L PIF+KG K+ + A + QE Sbjct: 302 LFYPSFNLTAAGGFTSFSLKDWLTPDGLFGNIAAGLAQPIFNKGLNKARLITARTVQQEA 361 Query: 355 YITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSL-SMINYRQ 406 + +Q+ +L A +EV NAL + K K + LQ +V+ KK + S NY Sbjct: 362 ALNFQQFLLKAGEEVSNALFAYQTAKTQQEIRVKQLAALQKSVDFTKKLLRYSSATNY-- 419 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D+L E+ +++ K Q ++ + LY ++G G Sbjct: 420 -----TDVLTSEQNLLSAQMEDIDDKLQQWQAVIALYRSLGGG 457 >gi|162146389|ref|YP_001600848.1| toluene efflux pump outer membrane protein ttgC [Gluconacetobacter diazotrophicus PAl 5] gi|161784964|emb|CAP54507.1| putative toluene efflux pump outer membrane protein ttgC precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 470 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 108/473 (22%), Positives = 211/473 (44%), Gaps = 39/473 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLKWWESFNDTS 60 R + L ++ A C + P Y P P+ P F + L ++ WW F+D Sbjct: 10 RVLMLLAAMVPAACDLAPRYAPPVAPV-PASFKERDGWALAVPGDDVPKGPWWRIFHDPV 68 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISHRFIPNLKT 114 L+ L N + A + + A+ + + +A +P S+ S R N+ Sbjct: 69 LDALEDRVTIANQDLRVAVAQYDEARADARTAQAGYYPTLDFTGSASRSGLSRETANVFN 128 Query: 115 NSTGQ-----LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ST LD +++D++G+ R+ ++ A ++ + L++ ++L Y R Sbjct: 129 KSTFNSYSLGLDLQYEVDVWGRVRNTAKAGRARAQASAGDLATVDLSLHAELATDYFTLR 188 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + ++ Q + Y+ + L+ +F G ++ + A++ + + M Sbjct: 189 GYDAMQAVLDQTVGNYRHALALTQAQFDVGYAAQPDVSAATAQLDGLLTQAADNRLRRAM 248 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L G P F + +S + P PI G+P L++ RPDI E+++A + Sbjct: 249 LEHAIAILTGQPPATFA--VAARSLDSAPP---PIAPGLPVALLQRRPDIAAAERRVAAA 303 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A IG+A++ +P+ ++N G A ++ WSFGP+ L +FD G+ + Sbjct: 304 NADIGVARAAYFPAFNINAMMGVQAAMPNHLLVAPAQAWSFGPEALLNVFDGGRRAALNA 363 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSMS 398 A + E+ +++TVL+A ++VE++L S+ ++ V Q A + + Sbjct: 364 HARAVYDEEVARYRQTVLDACRDVEDSLVSLRRLAEESATQQQAVIAAQDATHRAGELNT 423 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +Y Y+++ +IE + EVD+ + R++ S V L A+G G+ Sbjct: 424 GGLASY----YNVILARNIELSDRLSEVDIRV--RRMTAS-VALIKALGGGWG 469 >gi|331685932|ref|ZP_08386509.1| outer membrane efflux family protein [Escherichia coli H299] gi|331076885|gb|EGI48106.1| outer membrane efflux family protein [Escherichia coli H299] Length = 456 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 217/464 (46%), Gaps = 27/464 (5%) Query: 1 MNILRAI-FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKW-WESF 56 M IL ++ L L +GCT + +Y P + + I +K ++ +T + WE F Sbjct: 1 MKILSSLTLCLITALCSGCTNVLKSDYRAPEV-----NYPINWTKGDVDGNTSPFDWEEF 55 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 ND +L+ + + + N I A RI+ A+ + P+ A++S L +S Sbjct: 56 NDPNLDNWLHLVMTSNNDIAIAALRIHRAQLDAERTGITNTPTLKAALSMDGKKQLNNSS 115 Query: 117 ------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + L + +++DL+G+ R + + + ++ A+L ++S+ +Y Sbjct: 116 GWAKSGSASLGTSYELDLWGKIARQRDVAEWAVHASEEDFRSARLMLLSEASNNYWRIGF 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++I+ Q +D K+ + L+ +++ G S L ++ + + + E+ + L++ Sbjct: 176 VNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLDVIDAQQNLLTQENQLTGLQREHSQL 235 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 ++ + LLG P + + P +P +N IPA ++ RPDI +E +L + Sbjct: 236 LNQQAVLLGTVPGCQIVEPTTL------PKGSLPKVNANIPASILMRRPDISAKEWQLRE 289 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++A + I +S+ YP+ +L G++ T S +N S G L LP + + ++ Sbjct: 290 ALATVDIKRSEYYPTFNLTGALG-TSSASLLALLHNPVGSVGANLTLPFLEWRQRDIEVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + +++ + +++ + A+ +E+AL+ N+ T+L+ +EL +KS L+ + YR Sbjct: 349 IARNDYEQRVLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNEVRYR 408 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + LD + + E+ L + ++ +Y+ G Sbjct: 409 HGAVRISFWLDAQEKRRQAELRLDENRFNQLQNLAKIYLEFGGA 452 >gi|160897702|ref|YP_001563284.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160363286|gb|ABX34899.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 508 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 108/442 (24%), Positives = 203/442 (45%), Gaps = 50/442 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----IDTLK------WWESFNDTSLNKLV 65 GC+ Y +P + + P QF + D + WWE F D LN+L Sbjct: 29 GCSTQSAYQRPALEV-PAQFKEATPEAAEAGIWRPADPSRAQVPDNWWELFGDEQLNRLQ 87 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS--SYASIS------------------ 105 + A N +I QA R+ AA+ + S +A LFP+ S A + Sbjct: 88 QQAATGNQSIAQAAARLRAAQAAVASSQAGLFPTLGSTAGATRSRSGGASGASGTGGNTG 147 Query: 106 -HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N+ TN + L++ W++DL+G+ + +S A+ ++ + A+L+ + + + Sbjct: 148 SSGSSGNISTNYSLGLNASWELDLWGRVSGTVSASQASAQASSDDLAAARLSAQASITQT 207 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y R + + + L Y+++++L++ ++ G S + + EA+ KS ++ + + Sbjct: 208 YFSLRAADASVRLLQETLQSYEQSLKLTNNRYRAGVASSADVAQAEAQYKSTQAQLIEAQ 267 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIR 279 S H ++ LLG P F + + +P +PA L+ RPDI Sbjct: 268 TSRAQLEHALAALLGLPPAAF---------SLEAGAELPPPPEVPAMLSSQLLEQRPDIA 318 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E+++A + A++G+A++ +P+L+L+ G + N N WS GP L L +FD Sbjct: 319 AAERRVAAANAQVGVARAAFFPALTLSATAGYRGASLSNLVSAPNLFWSLGPSLALALFD 378 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + + A +S T+++TVL A++EVE+ L + + + AV +K+ Sbjct: 379 GGARTAAVESARASLDLAAATYRQTVLTALQEVEDNLVTASALAREQQVQIEAVAAAQKA 438 Query: 397 MSLSMINYRQGRYSLLDILDIE 418 + + YR G + L++L + Sbjct: 439 LDVVNNQYRAGTVAYLNVLSAQ 460 >gi|84060878|ref|YP_444081.1| EtsC [Escherichia coli] gi|157418282|ref|YP_001481354.1| EtsC [Escherichia coli APEC O1] gi|169546434|ref|YP_001711876.1| EtsC [Escherichia coli] gi|218534605|ref|YP_002401135.1| putative type I secretion outer membrane protein EtsC [Escherichia coli S88] gi|222104924|ref|YP_002539413.1| outer membrane protein [Escherichia coli] gi|331652495|ref|ZP_08353506.1| outer membrane efflux family protein [Escherichia coli M718] gi|76781970|gb|ABA54763.1| EtsC [Escherichia coli] gi|88770332|gb|ABD51769.1| EtsC [Escherichia coli APEC O1] gi|168830986|gb|ACA34767.1| EtsC [Escherichia coli] gi|218349809|emb|CAQ87206.1| putative type I secretion outer membrane protein EtsC [Escherichia coli S88] gi|221589349|gb|ACM18346.1| outer membrane protein [Escherichia coli] gi|331049601|gb|EGI21667.1| outer membrane efflux family protein [Escherichia coli M718] Length = 456 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 217/464 (46%), Gaps = 27/464 (5%) Query: 1 MNILRAI-FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKW-WESF 56 M IL ++ L L +GCT + +Y P + + I +K ++ +T + WE F Sbjct: 1 MKILSSLTLCLITALCSGCTNVLKSDYRAPEV-----NYPINWTKGDVDGNTSPFDWEEF 55 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 ND +L+ + + + N I A RI+ A+ + P+ A++S L +S Sbjct: 56 NDPNLDNWLHLVMTSNNDIAIAALRIHRAQLDAERTGITNTPALKAALSMDGKKQLNNSS 115 Query: 117 ------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + L + +++DL+G+ R + + + ++ A+L ++S+ +Y Sbjct: 116 GWAKSGSASLGTSYELDLWGKIARQRDVAEWAVHASEEDFRSARLMLLSEASNNYWRIGF 175 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++I+ Q +D K+ + L+ +++ G S L ++ + + + E+ + L++ Sbjct: 176 VNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLDVIDAQQNLLTQENQLTGLQREHSQL 235 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 ++ + LLG P + + P +P +N IPA ++ RPDI +E +L + Sbjct: 236 LNQQAVLLGTVPGCQIVEPTTL------PKGSLPKVNANIPASILMRRPDISAKEWQLRE 289 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++A + I +S+ YP+ +L G++ T S +N S G L LP + + ++ Sbjct: 290 ALATVDIKRSEYYPTFNLTGALG-TSSASLLALLHNPVGSVGANLTLPFLEWRQRDIEVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + +++ + +++ + A+ +E+AL+ N+ T+L+ +EL +KS L+ + YR Sbjct: 349 IARNDYEQRVLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNEVRYR 408 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + LD + + E+ L + ++ +Y+ G Sbjct: 409 HGAVRISFWLDAQEKRRQAELRLDENRFNQLQNLAKIYLEFGGA 452 >gi|167902462|ref|ZP_02489667.1| Outer membrane protein [Burkholderia pseudomallei NCTC 13177] Length = 446 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/381 (22%), Positives = 174/381 (45%), Gaps = 31/381 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWTRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFP---SSYASISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P +S + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDASGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 283 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 336 Query: 302 SLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 LSL+ S+ G WS G L P+F G + + R A +S + Sbjct: 337 QLSLSASMGHAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQY 396 Query: 359 QETVLNAIKEVENALTSINED 379 ++TVL A ++V + L ++ D Sbjct: 397 KQTVLAAFQDVADKLAALEND 417 >gi|167839091|ref|ZP_02465868.1| outer membrane efflux protein [Burkholderia thailandensis MSMB43] Length = 425 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 93/431 (21%), Positives = 203/431 (47%), Gaps = 24/431 (5%) Query: 32 LPTQFS--IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI 89 LP Q++ + ++++ D WW F D +L++L+ AL+ N + A R+ A+ Sbjct: 5 LPAQWATPVAAQASVVSDD---WWRRFGDPTLDRLIDSALRTNNDLAAAAIRVYRAQLQA 61 Query: 90 LSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS-DWKIDLFGQ-RRHIESSLANLD 143 +L P + ++S + + ++G + +++DL+G+ +++ L+ Sbjct: 62 GLADTNLTPNVTLGATGNVSRTLDTHRMSRTSGITAALGYELDLWGKLAAQRDAARWELE 121 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 + A D A+L +I Y + ++I+I + ++ ++L + GATS L Sbjct: 122 ATQADRDAARLALIGTTAALYWQIAYLNQQIAIGDANIAYAERTLQLVQSRHAAGATSGL 181 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP- 262 L + E + ++ +D L + N + ++ L P Q + P +P Sbjct: 182 DLAQAERNLSALRADQTQLIQQRTENRNALAILFDRPPQR-----QAAERDALPAAPLPD 236 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-- 320 + G+PA+L+ RPD+R E +L +S+A + + ++ YP+ +L G++ T S Sbjct: 237 VAAGVPAELLGRRPDLRAAEFRLRESLANVDVTRTSFYPTFTLTGNVG-TASTSLERVLQ 295 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 N + G L LP ++ I+ ++S +E + +++++ A+ EVENAL++ + + Sbjct: 296 NPVATLGLGLTLPFIQWNTMQLQIKVSKSQYEEAVVNFRQSLYRALGEVENALSARVQLE 355 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--S 438 + A+ +++ +L+ + G + LD ++ + ++A+ QL + + Sbjct: 356 AEADERTRALAQAQRAETLAKARFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNN 413 Query: 439 YVDLYIAIGSG 449 +DLY +G Sbjct: 414 RMDLYKVLGGA 424 >gi|51246687|ref|YP_066571.1| outer membrane protein (OprM) [Desulfotalea psychrophila LSv54] gi|50877724|emb|CAG37564.1| related to outer membrane protein (OprM) [Desulfotalea psychrophila LSv54] Length = 459 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 98/451 (21%), Positives = 213/451 (47%), Gaps = 17/451 (3%) Query: 10 LFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LFI ++++ C++ +PT+FS +K L + KWWE FND LN L++ + Sbjct: 11 LFIAIIISSCSMDKTDITTVSFQVPTEFSEQGTKQL----SQKWWEDFNDPKLNALIERS 66 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNSTGQ------LD 121 L N ++ A R+ A+ A+LFP + + ++ STG L Sbjct: 67 LTNNFSLRAALNRLQQAEARYGISHAELFPKVDGTAKAETGRTRAQSESTGNQSLLLGLT 126 Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +++DL+G+ R + +++ +L+++ ++ A +++ S++ + + R+ I Sbjct: 127 ASYELDLWGRIRSLNDAAQLDLNASSMDLETAAISLSSQIGVIWYQLCEQRSRLLIIKDQ 186 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + +K + + +L+F G S +++ + I+S ++ LEK R++ ++++TL+G P Sbjct: 187 IATNQKGLYIINLQFRTGKISIADVLQQQQLIESNRAEQTQLEKEIRLSYYSLNTLVGNP 246 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + +S +P G+P + I+ RPD++ + + ++G A + Y Sbjct: 247 PAQ--SGTIPESTGLIELPALP-KTGLPLEFIQRRPDLKSAFLAVQAADKRLGAAIAARY 303 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 P++S++ I + +++ ++ +S L P+ D GK + + + + QE + + Sbjct: 304 PAISISADINTSAESARDLFDNWFSNLAANLLAPLIDGGKRVAEVEKQRAVVQEMFNNYN 363 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + L A+ EVE AL + + ++ L K+M +Y G + +L Sbjct: 364 QKSLEALSEVEKALIREKQQHIYIAQVDRQFVLSAKAMKQIKNHYLNGSENYQRVLTALV 423 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +T + A+ L + ++L A+ G+ Sbjct: 424 STQNLAQQQISARFNLINNRIELCRALAGGW 454 >gi|61680586|pdb|1YC9|A Chain A, The Crystal Structure Of The Outer Membrane Protein Vcec From The Bacterial Pathogen Vibrio Cholerae At 1.8 Resolution Length = 442 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 87/389 (22%), Positives = 192/389 (49%), Gaps = 27/389 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---I 104 WW+ + D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ + Sbjct: 26 WWQRYQDAQLNHLIEEALQHSPSLCMAMARLKGAQGFARQAGAIRSFDLGLAASATESKV 85 Query: 105 SHRF---IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 S R+ P N G L + + D +G+ R + ++ + L +A A+ A+L + + Sbjct: 86 SERYQSATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMIST 145 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y + H L + K +EL ++ G + S+ + +A S+E++ Sbjct: 146 SIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAE 205 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRN 274 + +++S ++ + ++ L+G + ++ +P++ + G+P++ L+ + Sbjct: 206 LLGIQESIQLQKNALAALVGQGP-------DRAASIEEPHITLTSRYGLPSEAGVGLLGH 258 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R DI + + ++GIA++ YP ++L+ G A D+ F N + GP +Y Sbjct: 259 RADITAARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIY 318 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP+F G+++ + AE+ QE + T++ A+ E+ + +TS + + K + AV+ Sbjct: 319 LPLFTGGRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQ 378 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++++ ++ Y+ G + LD+L E + Sbjct: 379 QAEQALHIATNRYQGGLATYLDVLVAEES 407 >gi|320353755|ref|YP_004195094.1| NodT family RND efflux system, outer membrane lipoprotein [Desulfobulbus propionicus DSM 2032] gi|320122257|gb|ADW17803.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobulbus propionicus DSM 2032] Length = 473 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 112/455 (24%), Positives = 211/455 (46%), Gaps = 26/455 (5%) Query: 9 SLFIVLLAGC---TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L +++L+GC T P YT P LP ++ + + D +WWE F+D LN+LV Sbjct: 12 ALVVLVLSGCGALTHTP-YTTPEA-RLPASWTHRSEVGKVLAD--RWWEGFDDPVLNQLV 67 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS--- 122 AL++N + AT + A +D PS S + NL S G+ + Sbjct: 68 GEALRRNNDLAAATVLVRKAALQAELADSDRLPSLAVGGSTDYSRNLGAKS-GETRTVAV 126 Query: 123 ----DWKIDLFGQRRHIESSLANLDSAYAQVDIAK--LNVISKLIPSYIDARHFKERISI 176 +++DL+ R S A + D A L+++ Y + +RIS+ Sbjct: 127 SAAVGYELDLW-NRLGSTSDAARWQAVATDEDRASTALSLVGTTASLYWQIGYLNQRISL 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + ++ +EL ++ GA + L +++ E + S E+ +L + R+ N + Sbjct: 186 SEASIAYARRTLELVRVQKAAGAVTTLEILEAERSLASQEASHTSLVQQ-RVEARNSLAI 244 Query: 237 L--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G P + + Q + P + G+PA L+ RPD+R E +L +A Sbjct: 245 LFDGPPQSLAIREPQDLTTVILPG----VEAGLPASLLARRPDLRAAEARLRSLLASSDA 300 Query: 295 AKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 ++ YP++SL+GS + + S N + G +L LP ++ I+ AE+ ++ Sbjct: 301 TRASYYPAISLSGSFGGSSEELSRLLSNPIAALGAELALPFIQWRDMRRTIKIAEAEYEQ 360 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +++T+ A+ EVEN+L++ + + KLQ + K++ L I Y+ G +L Sbjct: 361 AVLEFRQTLYRALAEVENSLSARQQYRMEEEKLQQTLAAAKRTEELYRIRYQAGGSALKS 420 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 LD + + E++L+ + ++++ L A+G Sbjct: 421 WLDAQEDRRQAEINLAENRFNQLQNHITLAKALGG 455 >gi|227537926|ref|ZP_03967975.1| RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227242228|gb|EEI92243.1| RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 470 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 100/462 (21%), Positives = 214/462 (46%), Gaps = 34/462 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQ 70 VLL+ C VG Y++P + P + + + DT L W F D L L++ AL+ Sbjct: 16 VLLSSCAVGKPYSRPDLAT-PENY---REQVQVTGDTVLLPWKTFFKDPDLVILIEQALE 71 Query: 71 QNLTILQATERINAAKENILSVRADLFP----------------SSYASISHRFIPNLKT 114 +N I A + + + L P S S+S +F Sbjct: 72 KNKDISVAMLNLQQLDLSYKQAKRGLLPTLNLAVGASRVYQSRNSLNGSLSEQFTGEKYM 131 Query: 115 NS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + L + W+ D++G+ R E++ AN + K +I ++ +Y + E Sbjct: 132 DDFSATLTASWEADIWGKVRMQKEAARANYLMQQENLTALKTRIIVQVAQAYYNLITLDE 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IA + L + +++ L+F + L + + EA+ K+ E +P +++ + + Sbjct: 192 QLKIAANNIKLSDETLQMIRLQFQSAQVNSLGVEQAEAQKKTAELLVPLAKQNIAIQENA 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +S L G ++ +F+ N +G+PA L+ RPD++ E + + A + Sbjct: 252 LSILCGAYPDRIGRSAGLETYSFEENF----PVGVPALLLSRRPDLKVAEYAVVVANANV 307 Query: 293 GIAKSDLYPSLSLNGSI---ALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G++K +YPS+SL S+ + +N F PG + + PIF K ++++N +A Sbjct: 308 GLSKVAMYPSISLTPSVGANSFKFNNWFDLPGSLVK-NIAGNITQPIFQKKELQTNYEQA 366 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q+ ++++V+NA+ EV +A+ + + ++ +K+++ +M+ Y+ G Sbjct: 367 KIEQQKTAEQFRQSVMNAVAEVSDAMAKTQYTSERIGLVKQRKASLEKAVNDAMLLYKSG 426 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L+++ + + + +++ +++ + +LY A+G G Sbjct: 427 MATYLEVITAQNNSLENDLEAINIQKEKYDAVTELYRALGGG 468 >gi|226939155|ref|YP_002794226.1| Outer membrane efflux protein [Laribacter hongkongensis HLHK9] gi|226714079|gb|ACO73217.1| Outer membrane efflux protein [Laribacter hongkongensis HLHK9] Length = 455 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 103/422 (24%), Positives = 191/422 (45%), Gaps = 38/422 (9%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL-FPSSYASISHR 107 T WW++FND +LN LV L +N + A R+ A+ +RA L F + S+S R Sbjct: 50 TANWWQAFNDPALNTLVDEVLARNNDLAVAGLRLQQAR-----LRAGLAFSNQLPSVSVR 104 Query: 108 FIPNLKTNSTGQLDS-----------DWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKL 154 N + GQ DS +++DL+G+ R+H ++S ++ A + +L Sbjct: 105 QTGN-ASRQLGQGDSVTHAYGLTGGLSYEVDLWGKLSRQH-DASQWEAEATAADLAGTRL 162 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +I Y + +R+++A + ++L ++ GA S+L ++ ++S Sbjct: 163 TLIGSTATLYWQLGYLNQRLTLAQANTAYTAETLKLVEAQYRAGAASRLEVLSASQSLES 222 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIR 273 ++ L + ++ LL P L + P P + G+PA L+ Sbjct: 223 QKASETDLMQQREEARSALAILLDGPPGRVLP-----EPSLLPEASPPEVPAGLPAGLLA 277 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLY 331 RPD+ E +L S+A + + ++ YP LSL GS+ T + N +L Sbjct: 278 RRPDLMAAELRLRSSLASVDVTRASFYPVLSLTGSLG-TSSVALGQLLQNPLGVLASELT 336 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTKLQ 387 LP + + + +++ +E+ Q+ +++TV A+KEV ++L++ +D ++ L Sbjct: 337 LPFLNWNERRLSVQVSENEYQQAQTKFRQTVYGALKEVHDSLSARQQLAEKDARLTASLA 396 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A E+ + L + YR G SL D LD ++ E + + + + LY A+G Sbjct: 397 AAREVER----LYGVRYRVGATSLKDWLDAQQTRRTAETGWLDNRFEQYRRQIILYQALG 452 Query: 448 SG 449 G Sbjct: 453 GG 454 >gi|329119659|ref|ZP_08248340.1| outer membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327464256|gb|EGF10560.1| outer membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 494 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 111/445 (24%), Positives = 195/445 (43%), Gaps = 56/445 (12%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH 106 +WW++++D LN L++ L++N IL A R+ A E RADL P S+ AS+ Sbjct: 50 QWWQNWHDPVLNALIERGLRENRDILAARSRLTEAAEQARLARADLGPTLGASALASVGK 109 Query: 107 RFIPN---------------------------LKTNSTGQLDSDWKIDLFGQRRHIESSL 139 I N KT + G + W+ D+FGQ+R Sbjct: 110 SHIDNPLDAAERNALARLPQAAALADDTLGGRSKTAAVG-FTASWEPDIFGQKR------ 162 Query: 140 ANLDSA-YA------QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 ++ D+A YA Q+ +L V + Y AR + R+ A + + + + Sbjct: 163 SDADAARYAALGRQEQLYGTQLLVAGDIADHYFQARAAEGRLKTAERSISALQNMLRYVQ 222 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQ 251 +FT G + L + A + ++++ T+ +V +I+ L G P L Sbjct: 223 GRFTAGHATAYDLEQARAALAAMQAKHSTIAAERAAHVRSIAVLTGQVPQGYALPDSPAA 282 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----N 306 + + P P P +I RPDIR ++ A++ AK+DL P +L + Sbjct: 283 ALDTPP--AAPSGQ-TPQGMIERRPDIRANAAQVRAYAARLASAKADLLPRFTLRFMGQD 339 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 G I L D++ G+ + S + +PIF G+IK+NIR A++ Q +++ + +L A+ Sbjct: 340 GRIELDGDSALKGWGSMLSL--DIQIPIFTNGRIKANIRAADARLQTALLSYDQVLLTAL 397 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 E + A + + L+ A + K + + +R G+ +L L E + Sbjct: 398 GEADTAYHAQTAATRQTALLRTAEQAAAKQAADAQGLFRYGKITLDQALRAEVSAQDARE 457 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 +L A+ A++ V LY A+G G+ Sbjct: 458 NLIRAQLAAAQAAVGLYKALGGGWT 482 >gi|167589909|ref|ZP_02382297.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 297 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 28/281 (9%) Query: 20 VGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 VGP+Y +P + TQ + + D +W F D++L +L+ AL Sbjct: 21 VGPDYERPASAVSARFARDESPATQRDAAPAGTSADADA-AFWRGFGDSALTRLIDAALA 79 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIP------------NLKTNS 116 N + A R +A+ + R D P+ AS I HR + T+S Sbjct: 80 ANQDLQLAVSRYDASNALLRETRFDQIPTITASGQIGHRLTSKDQAFGAPRDQRDKPTSS 139 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G +++ W++DLFG+ RR +E+ A ++ A V ++ + ++ +Y+D R +ER+ Sbjct: 140 VG-INAAWELDLFGRMRRAVEAQRAETAASAADVRAVRIAIAGEVARAYVDLRGSQERLR 198 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + D ++ + L + G S+L + A+++S S I E + ++ H ++ Sbjct: 199 IARENADNQRQTLALIDARVGAGRGSELDAARARAQVESTTSRIAVYEAAIGVDEHRLAV 258 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 L G P + + + P L + I+ G P DL+R RP Sbjct: 259 LTGQPPGALIGELDAPAP--LPALVVDIDPGTPGDLLRRRP 297 >gi|299533390|ref|ZP_07046772.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298718596|gb|EFI59571.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 452 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 119/444 (26%), Positives = 224/444 (50%), Gaps = 15/444 (3%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 +LAGC PE K P +++ + +WW ++ND +LN LV AL QNL Sbjct: 1 MLAGC-AAPEAVKLDRTTPPQWQQQESAQKSDPAELAQWWRAWNDPALNALVDEALAQNL 59 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---GQLDSDWKIDLFG 130 + QA R+ ++ +L+ AD S R + ++ T +D W + LFG Sbjct: 60 DVAQAVLRLR--QQRLLAGTADAAFRPIVSTGARTLQDIAAVDTYFHASIDVSWDLGLFG 117 Query: 131 QRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 + A LD A AQ+ A++ +++ ++ Y+D R + + S+ + L ++ + Sbjct: 118 DSEAARRAGAAGVLD-AQAQLHAARVALVADVVHRYLDIRLAQVQRSLVERQLQQAQRQL 176 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 +L ++ Q T SL + + ++++ ES + TL ++ H ++ LLG E ++ Sbjct: 177 QLLQIRHEQRLTDAQSLEQQQLQLRTAESQLSTLNEAQARAAHALAALLGRERAEP-QWL 235 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 Q +++ P + + + +PADL+RNRPDI+ E + + A++G++++ LYP L+L GS Sbjct: 236 QPRTDAALPAMQA-LAV-LPADLLRNRPDIQSAEAAVEQAAAEVGVSRAALYPRLTLTGS 293 Query: 309 IALTHDNSFPGYNTHWSF---GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 + ++ + T S GP++ +P+FD G+ ++ E + Q +++ VLN Sbjct: 294 LLYAYNLTRNHRTTSDSIPMVGPQIDIPLFDWGRRRAVADGKELALQASIKAYRQAVLNG 353 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 I E E AL ++ ++ +LQ ++H + + G S L +D RA+ + + Sbjct: 354 IAEAETALAAVAAQQQRQQQLQSQQQIHAGREKAQAVRQQLGLSSELAGIDSARASLENQ 413 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSG 449 +L+ A+ A +YV LY A+G+ Sbjct: 414 SELATARAAEALAYVALYKAVGAA 437 >gi|188535127|ref|YP_001908924.1| Putative RND efflux system, outer membrane lipoprotein [Erwinia tasmaniensis Et1/99] gi|188030169|emb|CAO98055.1| Putative RND efflux system, outer membrane lipoprotein [Erwinia tasmaniensis Et1/99] Length = 463 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 107/463 (23%), Positives = 204/463 (44%), Gaps = 34/463 (7%) Query: 6 AIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++F ++LLAGC EY +P + L P Q+ S + WWE F D L++ Sbjct: 4 SVFLPALLLLAGCGHLTRSEYQRPLLSL-PVQWQPETSGD-TGQQYANWWEKFGDPRLSR 61 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------T 117 ++ L N + A + A+ +L P A + NL+ S + Sbjct: 62 VISQVLTSNNDLAAAAMTLQQARLAAGLTATNLTPEISARGAASNSKNLRHGSAPEERYS 121 Query: 118 GQLDSDWKIDLFGQ--RRHIESSLANLDSA--YAQVDIAKLNVISKLIPSYIDARHFKER 173 + +++DL+G+ R +S + SA Y ++ + ++L Y F ++ Sbjct: 122 SDITVGYELDLWGKLARTREQSEWEAVASAEDYKATVLSNIGTTAQL---YWSIALFNQK 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN- 232 I+ + L L ++ + L F G +L L++ + ++ ++ + T ++ R N N Sbjct: 179 IANQQRGLALSEQTVRLVQSWFNAGKVGRLDLLQSQQKLLDRQNQLRTFQQQ-RENARNA 237 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ LL PA + ++ N +PI P +I RPDI+ E +L S+A Sbjct: 238 LALLLNRPAEQHAD----EATVLDANQAVPIVQKTPLHVIAQRPDIQAAESRLRASLAGY 293 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW------SFGPKLYLPIFDKGKIKSNIRR 346 A+ + YPSLSL+ S+ N+ + W G L LP + IR+ Sbjct: 294 DAARLNFYPSLSLDASL-----NAGSQIFSQWFSNPIRVVGGSLALPFIQWNVTQLTIRQ 348 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ ++ + ++ T A+ EV+NA+ + ++LQ +++L ++ ++L+ YR Sbjct: 349 ADLRVKQAALAFRSTAYTALAEVDNAMEKRLSATEQRSRLQQSLKLSQRRLALTDSRYRA 408 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G +LD + +E L+ + + + L++A G G Sbjct: 409 GATDFTSLLDAQDDLMTLENSLAQTQYDYLYATLQLWLAQGGG 451 >gi|76818808|ref|YP_337335.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254263253|ref|ZP_04954118.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76583281|gb|ABA52755.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254214255|gb|EET03640.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 460 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 90/408 (22%), Positives = 186/408 (45%), Gaps = 19/408 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 59 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 118 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 119 LDTHQARRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 179 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKK 284 N + ++ L G P Q + P+ +P + G+PA+L+ RPD+R E + Sbjct: 239 RTENRNALAILFGRPPQR-----QAAERDALPDTPLPEVAAGVPAELLGRRPDLRAAEFR 293 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKS 342 L +S+A + + ++ YP+ +L GS+ T S N + G L LP + Sbjct: 294 LRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQNPVATLGLGLALPFIQWNTTQL 352 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 I+ ++S +E + +++++ A+ EVENAL + + + A+ L +++ +L+ Sbjct: 353 QIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLDAEADERGRALALARRAETLAKA 412 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 + G + LD ++ + ++A+ QL + + ++LY +G Sbjct: 413 RFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNNRMNLYQVLGG 458 >gi|315125704|ref|YP_004067707.1| outer membrane transport protein [Pseudoalteromonas sp. SM9913] gi|315014217|gb|ADT67555.1| putative outer membrane transport protein [Pseudoalteromonas sp. SM9913] Length = 468 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 113/474 (23%), Positives = 220/474 (46%), Gaps = 53/474 (11%) Query: 6 AIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ ++ I+LL+GC + P+ + LP Q+ ++++ ++ W+ ++ + Sbjct: 7 SLLAISIMLLSGCASNLNPQLREQAPNTLPDQWQQTAVESVVAVND-TWFNKLASPTVKQ 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------- 115 LV AL+ N +LQ + K+ ++ A L+PS IS R + K N Sbjct: 66 LVTQALKNNQQLLQNRFDVEIQKQQLIVTGAALWPS--LDISTR-VGRSKDNRPVSYNNS 122 Query: 116 STGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S+ L+ ++IDL+G+ RR + LA A+ + K +I+ +I ++ + Sbjct: 123 SSVSLELGYEIDLWGKLSDAKRRDNLNYLAQ----QARYEQTKQQLIADVITNWFN---- 174 Query: 171 KERISIAHQILDLYKK-------NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + A Q+LDL+K+ N+E+ + QG L + E+ + S I T + Sbjct: 175 ---LISAEQLLDLFKRREANAQQNLEIIESGYRQGLNEALDVYLARNELNNERSRIATQK 231 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + ++ LLG YP +NN P + I +G+P++LI +P +R Sbjct: 232 ANLTQAARSLERLLGEYPKGLIA------ANNDLPVINDDIPLGLPSELITRKPALRASW 285 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGK 339 +L S A + A +PSL+L ++ + + + F + WS + PIFD G+ Sbjct: 286 YQLLASDASLAYAHKQRFPSLNLAAGLSDSTNRVSDLFSASSLAWSLIGSISAPIFDAGR 345 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS- 398 + +N A Q+Q + +++ +A +VENA+T + + + + Q ++ K +++ Sbjct: 346 LAANEEIASLQTQKQEQAYLQSLYDAFGDVENAIT---QQQSLKARYQSTLQAQKNALAA 402 Query: 399 --LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LS Y+ G S +LD + + + L K QL + + L++A+G + Sbjct: 403 EQLSFEQYQSGLVSYTTVLDAQARSFDAQSSLIEIKNQLLTNRIKLHVALGGDF 456 >gi|172059115|ref|YP_001806767.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171991632|gb|ACB62551.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 509 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 102/462 (22%), Positives = 204/462 (44%), Gaps = 34/462 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW +ND L+ L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYNDPQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------- 119 N TI Q+ A+ + RA FP+ + S + +T+++ Sbjct: 85 SNQTIAQSAAAYRQARALVAEARAAYFPTVGLTASGSRARSGRTSTSSSASGFGSSSSIS 144 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 NSYSVGLDASWEPDLWGKVSRSVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDA 204 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Y +++L+ ++ QG ++ +++ + +++S ++ + H Sbjct: 205 LQRLLDDTVKSYGDSLKLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGVARAQYEHA 264 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TL+G PA+ F + QP + P+++ P+ L+ RPDI E++ A + +I Sbjct: 265 IATLIGEPASTF--SLPPNPLTAQPPI-TPVDV--PSALLERRPDIAAAERRAASANEQI 319 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A + +P+L+L+ + F W+ GP+L +FD G + A + Sbjct: 320 GVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTDAARA 379 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++ VL A ++VE+ L S + V + AV+ + ++++ Y+ G Sbjct: 380 TYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAVDSAEHALAIVTNQYKAGTV 439 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L++L + + L+ Q S V L A+G G++ Sbjct: 440 AYLNVLSAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWD 481 >gi|300312564|ref|YP_003776656.1| outer membrane multidrug resistance lipoprotein [Herbaspirillum seropedicae SmR1] gi|300075349|gb|ADJ64748.1| outer membrane multidrug resistance lipoprotein [Herbaspirillum seropedicae SmR1] Length = 515 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 106/475 (22%), Positives = 210/475 (44%), Gaps = 33/475 (6%) Query: 1 MNILRAIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 +++L A+ L L+AGC +G + +Q S+ S + +WW + Sbjct: 26 VSVLAAV--LAATLMAGCASFSDLGERAQPKSIDRYQSQQSLAASAVQAAWPSDQWWRVY 83 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR------- 107 D LN L+ ALQ ++ A R+ A+ A L+P S+ AS+ Sbjct: 84 GDAQLNALIDEALQSAPSMAVAKARLMKAEGAAQQQGAALYPQVSANASLDRMKQSYNNG 143 Query: 108 ----FIPNLKTNST-GQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLI 161 F+P N+T LD ++ID +G+ R + ++ + L+++ A A++ + + + Sbjct: 144 VPPDFVPKDYNNATRATLDFSYEIDFWGKNRAALAAATSELEASRADAAQARITLATSIA 203 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + L + ++++L + +FT G ++ S+ ++EA ++D+ Sbjct: 204 SAYAELAQLYAQRDTNEAALKVRVESLDLFNQRFTNGLETRGSVKQMEARRAIAQADLKA 263 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++S + + ++ LLG L + Q + +P +P + P +L+ RPDI Sbjct: 264 TDESIGLQRNKLAALLGAGPDRGLQLTRPQIDLSRP-FALPAQL--PVELLGRRPDIVAA 320 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + + +I +A++ YP+++L G +L D + S GP + LPIF+ G Sbjct: 321 RLRAEAAGKQIKVARAAFYPNVNLTAYFGFQSLGIDMLTRAGSDIGSIGPAISLPIFNGG 380 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++ R A +S E + + V A+++V + S +K + +L + Sbjct: 381 RLRGQFRSASASYDEAVANYDQAVTQALQDVADVGVS---EKALAGRLADVQAAADAAEE 437 Query: 399 LSMI---NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 I Y G + LD+L+ + LS + ++ V L A+G GY Sbjct: 438 AYRIVSNRYNGGLATYLDVLNAQDTLISNLRQLSDLRSRMFTLDVALVRALGGGY 492 >gi|113473747|ref|YP_718010.1| Outer membrane efflux protein [Sphingomonas sp. KA1] gi|112821427|dbj|BAF03298.1| Outer membrane efflux protein [Sphingomonas sp. KA1] Length = 479 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 105/467 (22%), Positives = 203/467 (43%), Gaps = 39/467 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----------WWESFNDTSLN 62 +LLAGC PE +P+ P I +S++ + +L WW F+D L+ Sbjct: 23 MLLAGCATLPE----RLPIAP----ISSSESYASAQSLAAPAAEWPADGWWHQFSDPQLS 74 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFI 109 +L++ L + A R A+ + R+ L PS A + F Sbjct: 75 RLIEEGLSGASDLRIAQARFARAEALVRQSRSRLLPSLNADAQGGVTKQSYNYIVPGDFA 134 Query: 110 PNLKTN-STGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDA 167 P + L DW+ID +G+ R ++ + A + A+L V + + +Y D Sbjct: 135 PRGWPDYGQATLSLDWEIDFWGRNRAALAAARSESEAAGVEAQAARLTVATAIAAAYADL 194 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 A + + + + +EL + QG ++ ++ + + + S E + L+++ Sbjct: 195 AGLHAEFDAAQEAVAVRSRTLELMRGRAGQGLENQGAVERAASALASAEGERAALDEALA 254 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 ++ H I+ L+G L + + + + + +P N+ PA+LI RPDI + Sbjct: 255 LSRHRIAALMGAGPDRGLA-IARPALDLGGDFGLPANL--PAELIGRRPDIVAARLRSEA 311 Query: 288 SVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + ++I A++ YP+++L G + AL + F + + GP + LPIFD G+++S Sbjct: 312 AASRISEARAAFYPNVNLRGLVGLQALGIGDVFKSGSDFGTAGPAISLPIFDGGRLRSRH 371 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R AE+ + + A++EV +A S + + + + A + +++ Y Sbjct: 372 RAAEADYALAVAQYDGALTQALREVADAAASERALAERLDRARAAQRAASSAWTVANNRY 431 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G + LD+L E A ++ + + V L A+G G+ Sbjct: 432 RGGLATYLDVLSAEDALIGARRGVAALQTRAFALDVALIRALGGGFR 478 >gi|30249073|ref|NP_841143.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] gi|30138690|emb|CAD84991.1| Outer membrane efflux protein [Nitrosomonas europaea ATCC 19718] Length = 460 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 118/460 (25%), Positives = 214/460 (46%), Gaps = 27/460 (5%) Query: 5 RAIFSLFIVLLAGCT--VGPEYTKPHMPL-LPTQFSIGNSKNLINID-TLKWWESFNDTS 60 R + L + L A CT PE P + +P Q+ + +L D T WW SF T Sbjct: 3 RVVLFLLVWLPAACTSLTAPESNMPSEAINVPAQWRA--TSDLAAPDVTRDWWRSFGSTE 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR--FIPNLKTNS 116 L L+ A +Q+L ++ A R++ A+ A L P S+ A S R + N ++ Sbjct: 61 LELLIVQAQKQSLNVVAAVARVHQAEAAARIAGAPLLPELSANADFSRRGQYGDNAFHDN 120 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYIDARHFKER 173 T G L + ++ID +G+ R + + A D L V + ++ ++R Sbjct: 121 TFSGGLAASYEIDFWGKNRARRDAARAILRATEFDHDTVSLTVTAGTAQLWLQTTALRQR 180 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I IA + LD + + L + GA + L + + + + + + L + + Sbjct: 181 IDIAERNLDNASRLLTLVEARRRAGAATLLDVARQRGLVAAQQRFLAALHQQASDTQTAL 240 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + LLG PA+ F +S+ L +P I+ G+P+DL+ RPDI E +LA + A I Sbjct: 241 AVLLGLPASTF----TVKSSRLDA-LQVPSISAGLPSDLLVRRPDIASAEAQLAAANASI 295 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A++ ++PSL L S+ + P Y L PIF+ G++ + A + + Sbjct: 296 IAARAAMFPSLQLTASMGVVTPLDGPLYGV----AAGLMAPIFNAGRLAAGRDLAVAQHE 351 Query: 353 EQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 E ++ +++A VE AL ++ D + + Q ++ +++ L+ Y+ G +L Sbjct: 352 ELLAGYRSIIISAFGNVEVALNAVTGYDLQATAQTQELIQ-ARRAFDLAESRYKAGAETL 410 Query: 412 LDILDIERATAKVEVDLSIAKRQLA-KSYVDLYIAIGSGY 450 + +LD++R T +D ++ + L ++ V LY A+G G+ Sbjct: 411 ITLLDVQR-TLYAALDNAMQFKLLTLQARVSLYRALGGGW 449 >gi|294667674|ref|ZP_06732886.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602514|gb|EFF45953.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 337 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 6/259 (2%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R + R+ +A + + + + + L ++G ++L L + + + ++ +P LE Sbjct: 26 YISVRGLQARLDVAQRQVATQQGLLSMVTLLHSKGLAAELQLRQAQGALAQAQAGVPGLE 85 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + +LG P H + + P + G P DL+R RPD+ E+ Sbjct: 86 AGLVAATNALDVMLGVPPGT--HRAELSAIKPIPPAPQIADSGTPGDLLRRRPDLIVAER 143 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +LA S A+IG+A ++ YP SL+G + A++ N F G S L +FD G+ Sbjct: 144 RLAASNARIGVAMAEYYPKFSLSGLLGSATAISGANLFTGDAAQSSGVLGLRWRLFDFGR 203 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I + I +A+ EQ ++ VL A K VENA T++ + ++ L V+ K+ Sbjct: 204 INAQIAQAKGQQAEQLAAYRLAVLRATKNVENAFTALIKREQQAAVLTQGVDALGKARGA 263 Query: 400 SMINYRQGRYSLLDILDIE 418 S + Y +G SL+++L+ + Sbjct: 264 SALAYEKGTVSLIEVLNAD 282 >gi|254442534|ref|ZP_05056010.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] gi|198256842|gb|EDY81150.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] Length = 496 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 101/428 (23%), Positives = 194/428 (45%), Gaps = 38/428 (8%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYA 102 ++ W + F D L ++ +L+ N + A R++A+ + R+D++P S Sbjct: 81 FESAGWTDDFGDPRLQAIIAESLEFNYDLRVAGARLDASLAGTTANRSDIWPTLNLSGSG 140 Query: 103 SISHR----FIPNLKTNSTGQLDS--DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 + S R + N + L++ W+IDL+G+ R + LA+ ++A A + A+L+ Sbjct: 141 NKSRRSSASGVSQTAYNESYGLNARFSWEIDLWGKLRNGYRAELADAEAAIADYEAARLS 200 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +++ ++ A ++ + +ILD ++ + F G L + + A + S Sbjct: 201 IAARVAKAWYAAVEANQQYELELRILDALSESSRIVEENFASGIARALDVRLIRANLASS 260 Query: 216 ESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + +S + N+ TLLG YP E + F P L I G+P++L+ Sbjct: 261 KSSLEQRRRSRDAAIRNLETLLGRYPKNEI-----DVVSTF-PELSEGIPAGLPSELLLR 314 Query: 275 RPDI--------RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH 323 RPDI ++++ S A++ PS+ LN G+ + F Sbjct: 315 RPDIIAAERRLAAAEQRRFESSKARL--------PSIDLNLSRGTSVGELSDIFEIVEER 366 Query: 324 -WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 WS + +F G++K+N RR+ + ++ ++ +TVL A +EVENAL+ + Sbjct: 367 IWSQSLGVAQTLFQGGRLKANYRRSRAQYEQNLASYAQTVLTAFREVENALSYQDSYAID 426 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 L+ A ++ L+ Y G + +LD R + + Q +S +DL Sbjct: 427 YEALKVAAFESVEAEKLAWDEYSSGLTDITTVLDSVRRSISAQRSYIQVANQRIQSRIDL 486 Query: 443 YIAIGSGY 450 Y+A+G G+ Sbjct: 487 YLALGGGF 494 >gi|167581761|ref|ZP_02374635.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 531 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 89/380 (23%), Positives = 177/380 (46%), Gaps = 29/380 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F IG WW+ + +L+ LV L+ + T+ Sbjct: 57 GATPLPERTAAAQGLA-QRFDIGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 109 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRF--IPNLKTNS------TGQLDSDW 124 A + + AA+E + + + + L PS A + R +P + GQL + + Sbjct: 110 AAEKNLTAAREQLRAQIGSSLLPSIDAGGQATRERALGVPAFGPQTVLYNVFAGQLQASY 169 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 170 TLDLFGAARFANRALSKRVDMNAYQLESARRALAANIVTAALTSAALAEQVATTERLVAL 229 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ + ++E+ +P L + ++ H ++ LLG T Sbjct: 230 AREQANDAAARHRLGAASRTDMLNAQQSAAALEASLPALRQQWQTTRHALAVLLGR--TP 287 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + Q +P+ + P+ L++ RPDIR E L + A++G+A + ++P L Sbjct: 288 DAAPADLALADVQLPQDVPVVV--PSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFPQL 345 Query: 304 SLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 SL+ S+ N +P G WS G L P+F G + + R A ++ ++ Sbjct: 346 SLSASMGHAGFN-WPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARATYDAAVDQYR 404 Query: 360 ETVLNAIKEVENALTSINED 379 +TVL A ++V + L +++ D Sbjct: 405 QTVLAAFQDVADKLAALDND 424 >gi|264679874|ref|YP_003279783.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262210389|gb|ACY34487.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 462 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 105/415 (25%), Positives = 204/415 (49%), Gaps = 28/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN--------ILSVRADLFPSSYAS 103 WW SF L+ LV+ A Q+L + A R+ A + + AD + A+ Sbjct: 51 WWHSFGSPELSALVEQARNQSLDVAAAVARVQQADARAAYARAALVPDLNADFGATRSAA 110 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 + + T G L S +++D +G++R + +++ +N ++ +I +L V + + Sbjct: 111 MDSHTERDASTWRVG-LSSSYELDFWGRQRALRDAAESNRQASVFDREIVRLTVTASVAQ 169 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++ +ER +IA L++ ++ ++L + GA + + L + ++ + + + L Sbjct: 170 AWLQCVGLRERAAIAQLNLEVSERLLKLVESRARYGAATSVELAQQRGQVAAQQRVVALL 229 Query: 223 EKSFRMNVHNISTLL-GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRY 280 K + H + LL G T+ + S NL IP + G PADLI RPD+ Sbjct: 230 RKQI-ADAHAVLALLSGQWTTDLV------SETSLSNLAIPGVRQGTPADLITRRPDVAK 282 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A + A++ + P ++L + L+ ++ G N S + PIFD Sbjct: 283 AEAQLLAADANLAAARAAMLPRVTL--TAGLSSESEKLGRLLENPLSSLAAGVLAPIFDA 340 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKKS 396 G++ SN A + QE I +++ +L A +V+ AL +++ +++ V + Q V +K+ Sbjct: 341 GRLASNRELAAAQKQELVIGYRKAILQAFNDVQTALNAVDGAERQAVVQAQE-VAQAQKA 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ-LAKSYVDLYIAIGSGY 450 +SL+ Y+ G +L +LD++R A DL++ RQ ++ + LY A+G G+ Sbjct: 400 LSLAESRYKAGADNLQTLLDVQR-VAYQSRDLAVQIRQERLQASIALYRALGGGW 453 >gi|213970448|ref|ZP_03398576.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. tomato T1] gi|301385860|ref|ZP_07234278.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302059247|ref|ZP_07250788.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302130093|ref|ZP_07256083.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924766|gb|EEB58333.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. tomato T1] Length = 462 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 94/422 (22%), Positives = 190/422 (45%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSAELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + ++L +F G+ + L L + + + + Sbjct: 168 LLSNVADRYAQTLAAREQGRIAGLNLANAQSVLKLVQTRFDSGSATALELAQQKNLVATQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + +++ F + I G+P+DL+ R Sbjct: 228 QRELPRIQQLANEQLITLAALLGQP----VQHLKLSDQAFDTLNWPDIGAGVPSDLLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +L + A + +A++ + P L+L+ + + + S L PI Sbjct: 284 PDLAKAEAELTAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + RA + QE T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 344 FNNGRLGAERDRALARQQELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 400 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 401 QAQTAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARVQ---ASIALYKALGG 457 Query: 449 GY 450 G+ Sbjct: 458 GW 459 >gi|85860992|ref|YP_463194.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] gi|85724083|gb|ABC79026.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] Length = 478 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 102/472 (21%), Positives = 206/472 (43%), Gaps = 40/472 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--------NSKNLINIDTLKWWESFND 58 + + VLL GCT+ P+Y +P P+ P+ + G + L + L W E + Sbjct: 10 VLGMIAVLLGGCTLAPKYQRPASPV-PSGWPTGAAYQGAKPDEPALTAVAELPWREFLPE 68 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLK-- 113 L K+++ AL + + T + A+ RA+L P + + R +L Sbjct: 69 KRLQKVIETALNNSRDLRLTTLNVERARALYGVQRAELLPVVDVMGSGLKERVPADLSSS 128 Query: 114 ----TNSTGQLD---SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN----VISKLIP 162 T +D + W+ID FG+ R ++ Y D A+ N ++S++ Sbjct: 129 GHSTTREVYSVDLGVTAWEIDFFGRIRSLKDRALQ---EYLATDQARRNARILLVSEVAN 185 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + E + ++ L+ + + +L ++ G +S+L L + + ++ + ++ Sbjct: 186 VWFAMAADAENLKLSRSTLEAQQASYDLIRKRYDVGLSSELDLRRAQTQVDTARRNVAVY 245 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + ++ L+G P L + + P I+ G+ ++++ NRPD+ E Sbjct: 246 TQLTAQDENALNLLVGTPLPGEL--LPAGLDGVLPPR--EISPGLSSEVLLNRPDVLAAE 301 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L + A IG A++ +P +SL +I F W F P++ +PIFD Sbjct: 302 HRLKAAHANIGAARAAFFPRISLTTAIGTASADLSGLFKSGQDTWMFAPQIAVPIFDART 361 Query: 340 IKS-NIRRAESS-AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 + ++ + E + QY ++T+ A +EV +AL + + + VE ++ Sbjct: 362 WSAYDVTKVERDISVTQY---EQTIQTAFREVADALAQRGTIGEQLAAQESLVEATARTY 418 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ Y +G S L++LD +R+ + L+ + + V+LY +G G Sbjct: 419 RLADARYTRGVDSYLNVLDAQRSLFSAQQVLTALRGSRFTNQVNLYKVLGGG 470 >gi|77456936|ref|YP_346441.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77380939|gb|ABA72452.1| putative outer membrane efflux protein [Pseudomonas fluorescens Pf0-1] Length = 483 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 98/423 (23%), Positives = 189/423 (44%), Gaps = 35/423 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN-ILSVR-ADLFPS---------- 99 WW S D L L++ A N + + R+ AK N L +R A+ +P Sbjct: 59 WWTSLGDPRLGALIEEAYASNPDLQEVAARV--AKANAFLDLRDAERYPEMDASAGVTRG 116 Query: 100 ------SYASISHRFIP--NLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVD 150 Y+ H++ NL N + + DL+G QR ES+L + +A + Sbjct: 117 RLSRFEDYSGEGHQYFTARNLAVNFS------YTFDLWGGQRAAWESALNSARAAEVDLQ 170 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 ++L + ++ +Y + + + + L+ K +EL+ ++ G + L ++++ Sbjct: 171 SSRLILAVNVVKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQS 230 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ES + + + +S L+G + H +++ SN + +P + PA Sbjct: 231 LKARSESTLIGANEDIEIARLQLSALIG-KGVDRAHTLERPSNLQASVVALPAQL--PAQ 287 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFG 327 L+ RPDI ++ + K+ YP+++L GS ALT D F G + W+ Sbjct: 288 LLGRRPDIVAARWRVEAETKNVEAVKTTFYPNINLVAAAGSHALTGDALFAGVSKFWNVA 347 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P + LPIFD G+++S+++ + + + +A+ EV ++T + ++ + + Sbjct: 348 PTVSLPIFDAGRLRSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFEQQIVVQR 407 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A + + S LS Y+ G + LD L+IE+ + E+ L+ + S V L A+G Sbjct: 408 DACAIAQSSYDLSQSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALG 467 Query: 448 SGY 450 G+ Sbjct: 468 GGF 470 >gi|320637191|gb|EFX07017.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. G5101] Length = 457 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 101/456 (22%), Positives = 214/456 (46%), Gaps = 22/456 (4%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ PDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRCPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLI 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 T+++TV A K+V NAL ++ + + V+ ++++ + + Y+ G L +L Sbjct: 359 ATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVL 418 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R+ + +L + + + L+ ++G G + Sbjct: 419 TAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 454 >gi|167823934|ref|ZP_02455405.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 9] Length = 438 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 86/381 (22%), Positives = 175/381 (45%), Gaps = 31/381 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 283 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 336 Query: 302 SLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 LSL+ S+ G WS G L P+F G + + R A +S + Sbjct: 337 QLSLSASMGHAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQY 396 Query: 359 QETVLNAIKEVENALTSINED 379 ++TVL A ++V + L ++ D Sbjct: 397 KQTVLAAFQDVADKLAALEND 417 >gi|121606788|ref|YP_984117.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120595757|gb|ABM39196.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 488 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 103/451 (22%), Positives = 188/451 (41%), Gaps = 21/451 (4%) Query: 21 GPEYTKPHMPLL----PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T P PL+ P Q+ D +WW D L +L+ A + T+ Sbjct: 21 GACATLPAPPLVSAPVPPQWQAALPHQGSLTDLSQWWRQQGDPVLAELIAAAQAVSPTVA 80 Query: 77 QATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLKTNSTGQLDSDWK 125 A RI A+ ++ A L P+ S SI +P + T G L + W+ Sbjct: 81 SARSRIEQARAARVAAGAALLPTLDASASLSRSRSLQSIGSDSVPVVTTAQAG-LQAAWE 139 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D+ G R ++++ L A AQ A+++V +++ Y R + ++ Sbjct: 140 LDVAGGGRASLDAAAQRLLGADAQWHEARVSVAAEVANQYDSLRSCRALANVTQLDAASR 199 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ LS L G T+ + A +++ + L G + Sbjct: 200 QETARLSGLSTQAGFTAPATDALARASAADARGRATRQAALCELDLKALVALSGLAEPDL 259 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + + I +PAD++ RPD+ +++A + A +G A++ YP L Sbjct: 260 RQKLAPVQVERAQTAIVSI-ASVPADVLAQRPDVFSAGREVAAASADVGSAQAARYPRLG 318 Query: 305 LNGSIALTHDNSFPGYNT--HWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L+GSI + T WS GP L LP+FD G+ ++++ A++ E ++ + Sbjct: 319 LSGSIGAAQARALGTTVTLDTWSIGPLSLSLPLFDGGRRTADVQAAQARYDEAAALYRAS 378 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 V A++EVE AL ++ + AV ++ + + + Y+ G SL ++ D R Sbjct: 379 VRQAVREVEEALVNLQSTGARQGDAETAVAGYRAAFTGTEALYKNGLASLPELEDARRTL 438 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E+ +++ + V LY A+G G+ P Sbjct: 439 LAAEISRVSLQQERKAAGVALYRAVGGGWTP 469 >gi|296273810|ref|YP_003656441.1| NodT family RND efflux system outer membrane lipoprotein [Arcobacter nitrofigilis DSM 7299] gi|296097984|gb|ADG93934.1| RND efflux system, outer membrane lipoprotein, NodT family [Arcobacter nitrofigilis DSM 7299] Length = 495 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 97/428 (22%), Positives = 192/428 (44%), Gaps = 40/428 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 WW+ + D LN+L+ AL+ + ++ A R+N A ++ P Sbjct: 66 WWKVYGDKQLNELISEALKDSPNMISAMARLNEADAYTQVTKSTNLPQISANAQVTKEKR 125 Query: 100 SYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 SY I+ R + N GQ L+ W++D +G+ R I +S++N+++ A++ +L + Sbjct: 126 SYNYITPRSVTPKGWNDYGQATLNFSWELDFWGKNRATIAASISNVEAMKAELAQTRLTL 185 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 S + +Y + + L + K + L + ++ G +K ++ ++ + + + Sbjct: 186 SSAIASNYAQLARLYANMDELKEYLIVQNKLLTLLNQRYENGLENKSTVDDAKSLLANAQ 245 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRN- 274 D+ +L++ + + I+ L+G L + P + + I G+P DL N Sbjct: 246 GDVLSLDEQISLQKNKIAALMGAGPDRGLKITR-------PTIDFYKIKFGLPDDLAVNL 298 Query: 275 ---RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPGYNTH 323 RPDI ++ I K++ YP+++L+ I L +S+ G Sbjct: 299 LGRRPDIMAARMQVESKEYLIKEKKAEFYPNINLSAFIGLQSLGLNLLHEKDSYMG---- 354 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP + LPIF G++K ++RR +S ++ + +T+ A+KEV +A TS K + Sbjct: 355 -SVGPAISLPIFSAGRLKGDLRRNKSIYEQAVANYNQTITQALKEVADAGTSQKSLAKQI 413 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + A+ K++ + Y G + L++L + + + K + + L Sbjct: 414 FRSLEALNSSKEAYEIKTKRYEGGLSNYLEVLYSQENLINAKRNFINQKSRALTLDIALK 473 Query: 444 IAIGSGYN 451 A+G GYN Sbjct: 474 YALGGGYN 481 >gi|330994510|ref|ZP_08318435.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] gi|329758510|gb|EGG75029.1| Outer membrane protein oprM [Gluconacetobacter sp. SXCC-1] Length = 473 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 107/460 (23%), Positives = 201/460 (43%), Gaps = 28/460 (6%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 LLAGC + P Y +P MP+ P ++ G + D WW S++D L+ LV AL+ Sbjct: 11 ALLAGCAWLAPTYHRPQMPM-PDKW--GTQQAATVPDGGAWWRSYHDPVLDALVDEALKN 67 Query: 72 NLTILQATERINAAKENILSVRADLFPS---SYASISHRF-----IP-NLKTNSTGQLDS 122 N + A ++ A+ A+ PS + A R +P K ++ G + Sbjct: 68 NDDLALAGSKLQQARAQYKYAFANQLPSISVAGADAMGRLHLKDELPVTHKMSNLGFVGG 127 Query: 123 --DWKIDLFGQRRHIESSLANLDSA--YAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +++ D +G+ + + A Y + A+L++ + Y R + I Sbjct: 128 MLNYEADFWGKNASLSKAAKAGVKAAGYGH-EAARLSIAAATTKLYFSLRALDRQREILQ 186 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + + L + GA L + + + + ++ +P +E ++ +LG Sbjct: 187 QTIGTQTALLALVRRQHEVGAVDALVVQNVTEQRDAAQAALPDVEDQRGKAESALAVMLG 246 Query: 239 YPATEFL-HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + + M++ N + + IP IP+ L+ RPDI E+ L S IG A++ Sbjct: 247 RAPQQIIGQAMERGKNIDELTIPIPTPPEIPSTLLERRPDIAMHEQTLIASNFNIGFARA 306 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 +P++SL + + DN + W+ + P+ D G+ S +R A + EQ Sbjct: 307 AYFPTISLASLAGVNNIDIDNLYRATTRSWTLAASMAAPVMDFGRTASGVRLARAEKNEQ 366 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE---LHKKSMSLSMINYRQGRYSL 411 I +++++ A +EV +AL E T+ Q + +K++ L+ + G S Sbjct: 367 VILYKQSIRTAFREVHDALL---EQANARTREQGDGDKETAAEKTVELTQLRLEHGYSSR 423 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+L + + E+ + A+ + VD+Y AIG G++ Sbjct: 424 LDVLSAQVLAQQAELAHTTARLSSLDASVDMYRAIGGGFD 463 >gi|282877719|ref|ZP_06286534.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella buccalis ATCC 35310] gi|281300291|gb|EFA92645.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella buccalis ATCC 35310] Length = 464 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 119/427 (27%), Positives = 184/427 (43%), Gaps = 50/427 (11%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 + W F D L + AL N+ +L A + A+ + + R PS F Sbjct: 58 MPWRSVFTDPQLQTHIGRALTNNVDLLNAALNVKMAEAQLKAARLSFLPS------FTFA 111 Query: 110 P--------NLKTNSTGQL--DSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLN 155 P K ST QL + W +DLFG Q+R + +L L + Q + K N Sbjct: 112 PQGTIASWDGGKAISTYQLPIAASWNVDLFGNLLSQKRAAQVAL--LATKDYQT-LVKAN 168 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKS 214 +IS + Y +++ I + + +L K+ + + LK + EA + Sbjct: 169 IISGVANMYYTLLMLDKQLEIVNNMHELTKETWDKMKVLKDLGRGIRSTGVQSAEANYYA 228 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLI 272 +E+ L + R + +S L+G PA Q S N +P N+ GI L+ Sbjct: 229 VEAKKTDLVRQIRETENALSLLMGQPA-------QSISRGRLENQALPANLSTGIGIQLL 281 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGP--K 329 NRPD+ E +LA+ + A+S YPSL++ + T+ N W Sbjct: 282 ANRPDVHAAEMQLAECFYGVETARSRFYPSLTIAPTGMFTNSAGAAVINPGKWMLSAVGS 341 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTK- 385 L PIF KGKI + +R AE+ ++ Y TWQ ++L A EV NAL S +E KI K Sbjct: 342 LVQPIFQKGKIIAGLRVAEAQYEKAYNTWQNSILKAGNEVSNALVLYHSSDEKSKIEAKQ 401 Query: 386 ---LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 LQ VE K +S S Y + + +L+ + AK+ D ++ V+L Sbjct: 402 IQTLQQNVEDTKLLLSQSSSTYLEVITAQQTLLNAQ--MAKITDDF-----HKMQAVVNL 454 Query: 443 YIAIGSG 449 Y A+G G Sbjct: 455 YQALGGG 461 >gi|110636959|ref|YP_677166.1| outer membrane lipoprotein [Cytophaga hutchinsonii ATCC 33406] gi|110279640|gb|ABG57826.1| outer membrane lipoprotein [Cytophaga hutchinsonii ATCC 33406] Length = 496 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 122/509 (23%), Positives = 231/509 (45%), Gaps = 83/509 (16%) Query: 8 FSLFIVL-LAG-----CTVGPEYTKPHMPLLPTQFSI----------GNS------KNLI 45 +LFI L LAG C + + M LP+ F++ G+S ++ Sbjct: 4 LNLFIYLVLAGLLYTNCVSTKQTPQAAMAPLPSTFAVIPDSLKMASAGDSTAAKQKEDSS 63 Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------- 98 + + W E F D++L L+ AL+ NL I A +RI A+ N+ + P Sbjct: 64 TVAAINWREYFKDSTLIGLIDTALKNNLDIQVAYQRILVARANVKRTKGASAPFISGAVS 123 Query: 99 ---SSYASISHRFIPNLKTNSTG-----------------QLDSDWKIDLFGQ----RRH 134 +Y + + N TN + +L++ W++D +G+ RR Sbjct: 124 AGQQNYGDYTQEGVGNYDTNFSPNVTDEQHMSPDLRDLYLRLETSWEVDAWGKLKNKRRA 183 Query: 135 IESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 ++ LA+++ V N+I+++ ++ + +SI ++ + L + + Sbjct: 184 AKAKYLASVEGKNWVVT----NMIAEIATTFYELLALDYELSIINETIILQTNQLSIVET 239 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM--NVHNISTLLGYPATEFLHYMQKQ 251 + G ++L++ + EA++ + S +E S R+ + I+ LLG F +++ Sbjct: 240 QKEAGRANELAVKQFEAQV--LHSKGLQIEISQRIVEAENRINYLLG----RFPQPIERD 293 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 N+F I++GIP++L+ NRPDI+ E +L S A + AK+ YPSL++ G++ Sbjct: 294 VNHFILTSPQQISVGIPSNLLSNRPDIKQAEYELKASKANVKAAKAAFYPSLTITGALG- 352 Query: 312 THDNSFPGYNTHWSFGPK---------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 F +N ++ P+ L P+ ++ IK++ R A++ E +Q+ + Sbjct: 353 -----FRSFNPNYFITPQALVNNIFGGLVAPLVNQSAIKASFRTAKAEQVEAMYNYQKAI 407 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 LN EV N + IN +I V + S+ + + GR + L+I+ A Sbjct: 408 LNGYIEVYNQMVYINNLNRIYDLKDQEVAVLTTSIETASELFLTGRATYLEIIITRSAAL 467 Query: 423 KVEVDL-SIAKRQLAKSYVDLYIAIGSGY 450 + ++L +I KRQ S V++Y A+G G+ Sbjct: 468 QSRLELINIKKRQF-NSVVNIYKALGGGW 495 >gi|167894014|ref|ZP_02481416.1| Outer membrane protein [Burkholderia pseudomallei 7894] Length = 370 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 86/381 (22%), Positives = 174/381 (45%), Gaps = 31/381 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW + +L+ LV L+ + T+ Sbjct: 1 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWTRYRSPALDALVDEGLRNSPTLA 53 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 54 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 113 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 114 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 173 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 174 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 233 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 234 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 287 Query: 302 SLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 LSL+ S+ G WS G L P+F G + + R A +S + Sbjct: 288 QLSLSASMGHAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQY 347 Query: 359 QETVLNAIKEVENALTSINED 379 ++TVL A ++V + L ++ D Sbjct: 348 KQTVLAAFQDVADKLAALEND 368 >gi|160888336|ref|ZP_02069339.1| hypothetical protein BACUNI_00749 [Bacteroides uniformis ATCC 8492] gi|156862013|gb|EDO55444.1| hypothetical protein BACUNI_00749 [Bacteroides uniformis ATCC 8492] Length = 466 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 101/421 (23%), Positives = 191/421 (45%), Gaps = 31/421 (7%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SY 101 +I +L W E F D L L++ ALQ N +L A +RI A+ ++S + PS Sbjct: 58 SIASLSWRELFTDPQLQSLIEQALQGNTDLLSARQRIKEAEATLMSAKLSYLPSFMLTPQ 117 Query: 102 ASISHRFIPNLKTNST--GQLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKL 154 +S N K + T G + W++D+FG +RR L +L+ Y Q Sbjct: 118 GGVSS--FDNSKGSWTYSGIASASWEVDIFGKLTNAKRRSKALYLQSLE--YEQA--VST 171 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++I+ + Y E+ I+ + +++++ G T++ S+ + EA + Sbjct: 172 SLIANVANLYYTLLMLDEQYRISEETAASWRESVRTMRAMMAAGMTNEASVSQSEANCRQ 231 Query: 215 IESDIPTLEKSFRMNVHNISTLL-GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 +E+ + L + + +++S LL P T + + F L +G+P L+ Sbjct: 232 VEASLLDLRQQVKEVENSLSILLDDVPGT--IERGRLAGQEFPQEL----AVGVPLQLLS 285 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPK 329 RPD++ E LA + A+S YPS++L+G+ T+ PG + G Sbjct: 286 RRPDVKSAELSLASAFYSTNAARSAFYPSITLSGTAGWTNSAGSMIVNPGKLLFSAIG-S 344 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK-KIVTKLQH 388 L P+F+KG + ++ A++ +E + +Q+ +LNA EV NALT + + K + + Sbjct: 345 LTQPLFNKGLNVAQLKIAKAQQEEARLAFQQALLNAGSEVNNALTQVQVARGKTELRARQ 404 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L S ++ + G + L++L ++ ++ + + ++LY A+G Sbjct: 405 ITSLETTVRSTRLL-MQHGTSTYLEVLTAQQGLLSAQLTQVADRFDEIQGIINLYQALGG 463 Query: 449 G 449 G Sbjct: 464 G 464 >gi|77458082|ref|YP_347587.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77382085|gb|ABA73598.1| outer membrane efflux protein [Pseudomonas fluorescens Pf0-1] Length = 464 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 102/425 (24%), Positives = 190/425 (44%), Gaps = 36/425 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW F LN L+ A + + A R+ A+ + + P A ++ Sbjct: 48 QWWTHFASPHLNLLIGQAQSGSHDLAAAIARVRQARASTVIAGGSQLPELTAGLNANRQK 107 Query: 111 NLKTNSTGQLDSD----------------WKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 L+ N QLD+D ++ID +G Q ES+ L ++ + Sbjct: 108 LLRGNGYSQLDADSSNKAVDYFDANLSASYEIDFWGGQAATRESARQGLRASEFDQATVE 167 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L ++S + Y A +E+ IA L + ++L +F G+ + L L + ++ + Sbjct: 168 LTLLSDVANRYTQALSLQEQSRIAALNLANAQSVLQLVQTRFNAGSATALELAQQKSLVA 227 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +PT+++ ++ LLG P E ++ +F + I G+P+DL+ Sbjct: 228 AQQRQLPTVQQQAEDARIGLAALLGRPVQELPPSLE----SFDQLQWPQIAAGLPSDLLT 283 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSF--PGYNTHWSFGP 328 RPDI E +LA + A + +A++ + P ++L+ GS A D+ P YN Sbjct: 284 RRPDIARAEAQLAAARADVKVARAAMLPKVTLSAQLGSGANRFDDVMRSPFYN----LTA 339 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PIF+ G++ + +A + +E T++ ++N +VE AL SI + Sbjct: 340 GLIAPIFNNGRLSAERDKATARQEELLETYRGAIINGFADVEKALNSIQGLDQQRQWQTE 399 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + +LS Y+ G LL +L+ +R A + V L +A+ Q + + LY A Sbjct: 400 ELNQAQTAFNLSQSRYQAGAEDLLTVLETQRTLYAAQDLNVQLRLARMQ---ASIALYKA 456 Query: 446 IGSGY 450 +G G+ Sbjct: 457 LGGGW 461 >gi|186472385|ref|YP_001859727.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194717|gb|ACC72681.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 487 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 95/403 (23%), Positives = 181/403 (44%), Gaps = 54/403 (13%) Query: 18 CTVGPEYTKPHMPLLPTQFS-------------IGNSKNLINIDTLKWWESFNDTSLNKL 64 C+ GP P MP P + I S ++ +WW + +LN L Sbjct: 21 CSFGPSGEPPAMPS-PEHYGAQPQLSKTVAAGGIAQSFDVGATGVTQWWRLYRSPALNAL 79 Query: 65 VKIALQQNLTILQATERINAAKENIL--SVRADLFPSSYASIS-----HRFIPNLKTNS- 116 V L+ N L AT+R AA + L V A PS ++ +P L Sbjct: 80 VDEGLR-NSPTLAATQRTLAAAQEELRAQVGASTLPSIDGAVQVERARSPVVPGLGPEQV 138 Query: 117 -----TGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 GQL + + DLFGQ R++ S S A ++ +++ ++ + + ++ S I+ Sbjct: 139 QYNFFAGQLLAHYTFDLFGQTRYMNSASAARVNVQAFELEASRRALAANIVASAINVAAL 198 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +I++ +++ + ++ G+ S+ + + + +I + +P L + + + Sbjct: 199 DRQIALTERLVAVSIDAANEDQQRYALGSVSRAQALASKQDAAAIAATLPALRQQRALAI 258 Query: 231 HNISTLLG--------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 H ++ L+G PA + L + ++P+ +P+DL+R+RPDI+ + Sbjct: 259 HTLAVLMGRTPDNAPDVPALDSLSLPE----------HVPV--AVPSDLLRSRPDIQAAD 306 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDKG 338 + + A +G A + L+PSLSL GS+ S+P G W+ G L PIF G Sbjct: 307 AAVKAAAADVGAATAQLFPSLSLTGSMG-RGGFSWPAVLSGAGGLWAIGAGLSQPIFHGG 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + + R + + + ++ TVL+A ++V N+L +++ D + Sbjct: 366 ALFAQRRASIDAYAAAVLHYKSTVLSAFQDVANSLAALDNDAQ 408 >gi|121603478|ref|YP_980807.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120592447|gb|ABM35886.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 521 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 199/432 (46%), Gaps = 35/432 (8%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN--------AAKENILSVRADLF 97 ++D WW FND L+ L + A Q + ++ A R+ A ++ V A L Sbjct: 89 SLDKGAWWRLFNDPGLDALQQQARQASPSLQVAAARLRQAHTLVDIAGASSLPRVDAGLR 148 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSD--------WKIDLFGQRRH-IESSLANLDSAYAQ 148 + + ++R ++ + +D +++DLFG++RH +++LA A A Sbjct: 149 GTRTGTSANRPAATAGAQASASVQNDFVLSSTVSYELDLFGRQRHEQQAALAFEQQAQAD 208 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 A+L + + L Y R I++ Q L + + +L + GA S L + Sbjct: 209 QLNAQLVLSADLAAFYFTLRSLDAEIAVVEQGLQVQGRAADLLAARHEGGAASGLDRAQQ 268 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--- 265 +A+ + + + L K H ++TL+G PA++F P +P + Sbjct: 269 QAQFDATRTQLTLLRKQRGQLEHALATLVGTPASQFTL----------PVAALPAGVPGL 318 Query: 266 --GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGY 320 +P+++++ RPDI E+ +A + A++G+AK+ +PSL+L+ S N Sbjct: 319 PVALPSEVLQRRPDIAAAERAVAVANAQLGLAKAAWFPSLTLSASGGWEAKNIASLIDAP 378 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + W+ G L +FD G++++ +A + + ++++ VL A++EVE+ L ++N Sbjct: 379 SLLWALGGSLTQAVFDGGRLRAREEQARAGQELAAASYRQVVLRALQEVEDGLLALNALA 438 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 ++ Q A ++ + ++ Y G + LD++ ++ + S + Q ++ Sbjct: 439 SAQSQSQAASASAQRVLDIAQDRYAGGLSTYLDVVTAQQNVLTNQRLSSQLRGQQLQATA 498 Query: 441 DLYIAIGSGYNP 452 L A+G G+ P Sbjct: 499 YLVKALGGGWQP 510 >gi|261210864|ref|ZP_05925154.1| outer membrane component of tripartite multidrug resistance system [Vibrio sp. RC341] gi|260839839|gb|EEX66439.1| outer membrane component of tripartite multidrug resistance system [Vibrio sp. RC341] Length = 484 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 212/439 (48%), Gaps = 32/439 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLN 62 AI L ++L GC+V + + + S N+ + ++ + WW+ + D LN Sbjct: 19 AISLLSALVLTGCSVPEHHNDLAVMREANELSSTNTFSHQAEMDWPSANWWQRYQDEQLN 78 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRA----DLFPSSYAS---ISHRF---IPNL 112 +L++ ALQ + ++ A R+ A+ A DL ++ A+ +S R+ P Sbjct: 79 QLIEEALQHSPSLEVAMARLKGAQGLARQAGAARSFDLGLAASATESKVSERYQSATPPD 138 Query: 113 KTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID-AR 168 N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y + AR Sbjct: 139 GWNDYGTLTLNFQYDFDFWGKNRATVTAATSELAAAEAESVAARLMISTSIANAYAELAR 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + ++ H L++ K +EL ++ G + S+ + +A S+E++ + +S ++ Sbjct: 199 LYANQHTV-HAALEVRNKTVELLDKRYANGLETVGSVSQAKAIAASVEAEWLGINESIQL 257 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRYQEKK 284 + ++ L+G L + P++ + G+P++ L+ +R DI + Sbjct: 258 QKNALAALVGQGPDRALTITE-------PDIQLTHRYGLPSEAGVGLLGHRADITAARWR 310 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F G+++ Sbjct: 311 AEAASQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLE 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ ++ Sbjct: 371 GQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQALHIAT 430 Query: 402 INYRQGRYSLLDILDIERA 420 Y G + LD+L E + Sbjct: 431 NRYEGGLATYLDVLVAEES 449 >gi|330817010|ref|YP_004360715.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] gi|327369403|gb|AEA60759.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] Length = 475 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 104/436 (23%), Positives = 196/436 (44%), Gaps = 38/436 (8%) Query: 13 VLLAGCTVGPEYTKPHMP-----LLPTQFSI--------GNSKNLINIDTLK--WWESFN 57 LLAGCTV P++ P P L PT + G ++ L ++ WW F Sbjct: 27 ALLAGCTVCPDFVAPSPPQVSRYLPPTAEAANAPAWRGDGRTQFLSEAKPMRRDWWSGFA 86 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKT 114 ++ V AL + T+ A + ++ +L+ R FP + A R+ P L+T Sbjct: 87 SREIDSAVADALTGSPTLEGAQATLRRSQHALLAGRGIFFPQADAQAGASRQRYAP-LQT 145 Query: 115 NS----------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 T + DL+G QRR +E+ A++D+ A + A L + + ++ + Sbjct: 146 GQPLPATIFNLFTLTAAVSYTFDLWGGQRRLVEALAADVDARRAALAAAYLMLSANVVNT 205 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I + + + +L L + I L+ ++ T GAT++ ++V L+++ S+ + +P ++ Sbjct: 206 MIARAAYHDAAATTRDMLALLDEQIRLTRIQATAGATTEGAVVALQSQRASLAATLPAID 265 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ L G +PA ++ ++ L P + P+ L R RPDI+ E Sbjct: 266 LGHGQADDLLALLAGRHPAEWRAPELRLEAITLPAEL--PATV--PSSLARRRPDIQQAE 321 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 +L + A++G A + LYP L+L+ S + ++ F W G L P+F G Sbjct: 322 AELHIASAQVGTATAALYPELTLSASGSFDGASASRLFSPAGRAWGIGAGLSAPLFRGGT 381 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + R A+ + +++ VL A +V ++L ++ D + V A+ + ++ L Sbjct: 382 FWNQRRAAQDALALADANYRQVVLKAFSQVADSLRALAGDAQAVDARADAMTASRTTLRL 441 Query: 400 SMINYRQGRYSLLDIL 415 + + G S L +L Sbjct: 442 AQVGLDSGVGSDLQVL 457 >gi|296116701|ref|ZP_06835311.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] gi|295976913|gb|EFG83681.1| RND efflux system, outer membrane lipoprotein, NodT family [Gluconacetobacter hansenii ATCC 23769] Length = 528 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 96/471 (20%), Positives = 200/471 (42%), Gaps = 47/471 (9%) Query: 16 AGCTVGPEYTKPHM-------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 GC VGP Y +P L P + + ++ WW +ND LN L Sbjct: 43 GGCMVGPNYHRPSAIVSARFKELQPAPGWERAAPQMASLPKHDWWTIYNDPILNGLESQV 102 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL-------- 120 N + + +A+ I SVRA LFP+ S+ N+ G Sbjct: 103 AVSNQNVKEYEANYRSARAMIDSVRAQLFPTISGSL------GFNRNAHGAGSLSSSGSS 156 Query: 121 --------------DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + W +D++G+ RR I+ + ++ A + A L+ ++L +Y Sbjct: 157 LYGKSQYNTYDIGPSASWDLDVWGKIRRQIQQQVTTAQASAADLANATLSYQAQLATAYF 216 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R+ + + + ++ ++++ ++ G ++++ ++ + + + Sbjct: 217 NLRYQDSLHDLLERYVRFNEQALQITQNQYDAGTADPTAVLQARTTLEQNRAALVQTGVA 276 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H I+ L+G P + + + P IP+ + PADL++ RPDI E+ + Sbjct: 277 RAQYEHAIAVLIGKPPADLTIAAGELTRTIPP---IPVTV--PADLLQRRPDIASAERAM 331 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIK 341 + A+IG+ + +P +++ S + + N WS G +F G Sbjct: 332 EEYNAQIGVDIAAFFPDITITASFEQSGGDPVTSLMSAANRIWSLGAAATETLFSGGSRT 391 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A + T+++TVL A++ E++L+++ + + Q A+E +S+ +++ Sbjct: 392 AAVHEANAQYDAAVATYRQTVLTALQSTEDSLSNLRILAQQQEQQQKALEFANRSVEVAL 451 Query: 402 INYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G ++ E A + E LSI ++++ S V+L A+G G++ Sbjct: 452 NQYKAGTEIYTTVITNETSALSDAENVLSIQQQRVVDS-VNLVEALGGGWD 501 >gi|186476340|ref|YP_001857810.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184192799|gb|ACC70764.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 515 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 109/481 (22%), Positives = 211/481 (43%), Gaps = 67/481 (13%) Query: 13 VLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKL 64 +++AGC + P+ T P +G + N D WW +++D LN Sbjct: 19 LIIAGCASTGHIAPQSTGTE----PASLDVGAAIRAANTDAQWPAADWWRAYHDPQLNAW 74 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPN----------- 111 ++ A + ++ A R+ A+ ++ P S I + PN Sbjct: 75 IEQAQAGSPSLAAAQARVREAQSIAGVAKSAELPQVAGSMQIQRKQWPNNVFYGPGELAG 134 Query: 112 -LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDA 167 N+T +L + +DL+G+ ++ LD A+A+ A+L + + ++ +YI Sbjct: 135 QQSWNNTAELGLSYHLDLWGKDKNATEEA--LDLAHARAADYRAAQLELEANIVRAYI-- 190 Query: 168 RHFKERISIAHQILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 ++S+ + +LD+ K +E L++ + G ++L + + E + E I Sbjct: 191 -----QMSLNYALLDIAKSTLEQQQQVAALANRRLKGGIGTQLEVAQAETPLPEYERQID 245 Query: 221 TLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +E+S + + ++ L G A + + Q + F +P + PA+LI +RPDI Sbjct: 246 AIEESIALGRNQLAALAGKGPGAGDSITRPQLALSGF---AGLPSRM--PAELIGHRPDI 300 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSF-PGYNTHWSFGPKLYLP 333 +A I +AK+D YP++ S+ G A+ F W+ GP L LP Sbjct: 301 VAARWTVAAQARGIDVAKADFYPNIDLLASVGGYAAMGPLFGFLKSQAGGWTAGPALSLP 360 Query: 334 IFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IF G++++ + A + A EQY ++++NA+KE+ + + + + Q +V Sbjct: 361 IFTGGRLRAQLGAASAGYDVAVEQY---NQSIVNALKEIADEVVRMRSLDTQLNDAQRSV 417 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA--KSYVDLYIAIGS 448 K+ L+ YR+G +++L + T + +AK Q +++ L A+G Sbjct: 418 ATANKTYQLAREGYRRGLTDYVNVLIAQ--TQLLHAQEGVAKVQAGQLQAHATLVTALGG 475 Query: 449 G 449 G Sbjct: 476 G 476 >gi|262376684|ref|ZP_06069912.1| outer membrane protein [Acinetobacter lwoffii SH145] gi|262308394|gb|EEY89529.1| outer membrane protein [Acinetobacter lwoffii SH145] Length = 488 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 164/337 (48%), Gaps = 21/337 (6%) Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++D +G+ R + +++L + + + D ++ +I ++ +++ +++A Q L Sbjct: 135 YELDFWGRVRSLRDNALDSFLATQSARDATQIALIGQVSQAWLSYSFANANLALAEQTLK 194 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ L+ +F G S+L + + + +++ +D+ ++R V LL Sbjct: 195 AQLESFNLNKKRFDVGIDSELPVRQAQISVETARNDV----ANYRTQVAQAQNLLN---- 246 Query: 243 EFLHYMQKQSNNFQPNLYI-------PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L Q+ N P + + G+P+DL+ NRPD+R E +L+ + A I A Sbjct: 247 --LLVGQQVPANLLPAQRVTRITSNTALGSGLPSDLLINRPDVRAAEYRLSAAGANIAAA 304 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ L+P++SL GS + F + WSFGP L +PIFD G ++NIR +E+ Q Sbjct: 305 RARLFPTISLTGSAGYASTDLGDLFKSGSFAWSFGPSLDIPIFDWGTRQANIRISETDQQ 364 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++++ A +EV +AL + + VE + LS +R G S L Sbjct: 365 IALSDYEKSIQTAFREVNDALAVRQNIGDRLAAQRRLVEATNTTYRLSQARFRAGIDSYL 424 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD +RA+ E L + ++ + V++Y +G G Sbjct: 425 TVLDAQRASYAAEQGLLLLEQANLNNQVEVYKTLGGG 461 >gi|88801760|ref|ZP_01117288.1| putative outer membrane lipoprotein [Polaribacter irgensii 23-P] gi|88782418|gb|EAR13595.1| putative outer membrane lipoprotein [Polaribacter irgensii 23-P] Length = 477 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 116/457 (25%), Positives = 205/457 (44%), Gaps = 31/457 (6%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESFNDTSLNKLVKIALQ 70 L C V EY+KP ++ S+ ++NL I++ + W F DT L + V LQ Sbjct: 28 LQSCFVAKEYSKP---IITETESLYRTENLPSDSISMAAISWKTLFTDTYLQQYVDEGLQ 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSY--ASISHR-------FIPNLKTNSTGQLD 121 N+ I A ++I AA + PS A++ H+ F L ST Q D Sbjct: 85 NNMDIRIAVQQIVAANAYAKQGKLGYLPSVNIGANVIHQELSKNSQFGSFLTNTSTDQFD 144 Query: 122 SD----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W+ DL+G+ R + ++ A + A + K +IS + +Y ++ I Sbjct: 145 ITANLTWEADLWGKIRSNSRATQALYLQSVAGHQVVKTQLISSIATTYYTILALDAQLEI 204 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + ++ K +E G T+++++ + A+ + S LE + + + L Sbjct: 205 TKKSIETRKTGVETIKALKVAGFTNQVAVDQNIAQYNNARSLEVDLEVALFKAENTLCIL 264 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LG + LH NN + + I +GIP+ L+ NRPD+ E L ++ +A Sbjct: 265 LGKTPQQ-LH-----RNNLETQIINTQIKLGIPSKLLSNRPDLVAAEYGLINAFELTNVA 318 Query: 296 KSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 KS+ YP+ L G +L D F + + L PIF++ ++K+ A + Q Sbjct: 319 KSNFYPAFRLTASGGFQSLELDKLFSANSLFTNIISGLTQPIFNQRRLKTQKEVAIAQQQ 378 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++T+L A EV NAL N + + L + VE +K+ S + G + L Sbjct: 379 QALLKFKKTLLIAGTEVSNALFVFNAENRKFKFLNNEVEALRKAEKNSEELLKNGYANYL 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D+L ++ E+ + ++ Q + V+LY A+G G Sbjct: 439 DLLTARQSALSTEIKVIDSQLQQLLTVVNLYKALGGG 475 >gi|329889273|ref|ZP_08267616.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Brevundimonas diminuta ATCC 11568] gi|328844574|gb|EGF94138.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Brevundimonas diminuta ATCC 11568] Length = 461 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 36/419 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW +F D +L V AL +N + A R+ A+ R+ L P S++ + Sbjct: 52 WWSAFGDAALTAAVDEALARNTDVAVAESRVREAEAFAAQSRSALSPLLTGSVAVQKARE 111 Query: 112 LKTNSTGQ----------LDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKL 160 L N+ GQ L ++IDL+G+ R +++ A D A L+V Sbjct: 112 L--NAFGQAAEAALAQPQLQVAYEIDLWGRLRSADAAARASLQASRFSRDAAALSVAGAT 169 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ ++ +A + L + + L+ + G TS+L L + EAE ++ IP Sbjct: 170 ARAYVALVALDAQLEVASRTLVSREDAVTLARRRAEAGQTSRLELTQAEAEFQAAAQRIP 229 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 TLE + R + + L G F + G+P+ L+ RPDI Sbjct: 230 TLELAIRRQENALRLLTGALPGPIAR------GRFDALILPDPEPGLPSTLLARRPDIAQ 283 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E +L + A +++ L P + L+ S+A L + P T WS G + P+FD G+ Sbjct: 284 AEAQLVAADASFASSRAALLPQVRLSASLAELFVEGLDP--VTIWSAGGSVLAPLFDGGR 341 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-----DKKIVTKLQ--HAVEL 392 + + +E+ + + ++ VL A EVENA+ ++ D+ +L AV Sbjct: 342 LTAQTDASEARRDQAALAYRRVVLGAFSEVENAMEGVDRLQAQADRAEAQRLALNEAV-F 400 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 H ++ YR G S L+ LD +R E L + + V LY A+G G+ Sbjct: 401 HARN------RYRAGYTSYLEELDAQRGLLTAETALIQLREMQMTNAVALYQALGGGWT 453 >gi|296274606|ref|YP_003657237.1| NodT family RND efflux system outer membrane lipoprotein [Arcobacter nitrofigilis DSM 7299] gi|296098780|gb|ADG94730.1| RND efflux system, outer membrane lipoprotein, NodT family [Arcobacter nitrofigilis DSM 7299] Length = 474 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 113/447 (25%), Positives = 204/447 (45%), Gaps = 34/447 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS-KNLIN--IDTLKWWESFN-DTSLNK 63 F L I L A + Y +P P+ P + G + K IN I+ WE+ D L K Sbjct: 13 FVLSIFLSACSLIDSRYEQPTAPV-PINWPKGEAYKEQINPTINKALVWENMILDEKLKK 71 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD 123 ++KIAL+QN +I ++ I +A+ A FPS A +S +L +++T + S Sbjct: 72 VIKIALKQNRSIKESIANIESARATYKVQHAGEFPSIDAGVSGTKARSLNSSNTNKDTSS 131 Query: 124 -------------WKIDLFGQRRHIESSLANLD-----SAYAQVDIAKLNVISKLIPSYI 165 +++D FG+ ++ L+ +D S + K+ I+++ +++ Sbjct: 132 ISENYKATVGLSSYELDFFGKAKN----LSKIDFEKYLSIQEAQKVTKITTIAEVTNAWL 187 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 K + A + ++ KK++++ + G SK++L + +DI + Sbjct: 188 TLAADKSLLDFAKETVNSSKKSLKIIQQRVNLGVDSKVTLYDAQTVYYQAMADIEKYKTQ 247 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +++ ++ L+G E L K N + IP+ G+ + ++ NRPDI E L Sbjct: 248 IAQDLNALNLLVGENVKEEL-LPSKLDENKEYLATIPV--GLSSKVLLNRPDILQAEHDL 304 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKIK 341 + A I +A++ +PS+S+ S + +N F G WSF P + LPIFD G Sbjct: 305 KAANANISVARAAYFPSISITTSAGIASSALNNLFTGGAASIWSFVPSISLPIFDWGAKG 364 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ A+S ++ + A KEV +AL + + ++ V+ K S LS Sbjct: 365 ASLDYAKSQRDLYIAKYELAIQTAFKEVADALARYGTIENQLNAQKNLVDASKNSFFLSQ 424 Query: 402 INYRQGRYSLLDILDIERATAKVEVDL 428 Y+ G + L+ L +R KVE +L Sbjct: 425 RRYKSGIDTYLNALSSQRNLYKVEQNL 451 >gi|94310964|ref|YP_584174.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354816|gb|ABF08905.1| RND efflux system (NodT family) [Cupriavidus metallidurans CH34] Length = 519 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 100/424 (23%), Positives = 196/424 (46%), Gaps = 33/424 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 W + F+D L L A++ N + A R+ A++ + RA L+PS + I RF Sbjct: 85 WVDQFHDPQLRALADEAVKDNPNLQVALARLEASRAMADATRAALYPSVDFEGSIIRQRF 144 Query: 109 -----------IPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 + + S Q W +D +G+ R +E++L++ S A+ A+L + Sbjct: 145 SATDLFTGTPLAGSWQNQSRLQFGLSWDLDFWGKNRDALEAALSDDRSMEAESQAARLML 204 Query: 157 ISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + SY A F +R +A + + + +LS + G +++ + A + S Sbjct: 205 TTSIARSYNRLAALFAQR-DVAERAIAQRRDLTDLSRQRLAAGLDTQVETTQARATVASA 263 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRN 274 ++++ +++ + + I+ LLG L + N P L + IG LI Sbjct: 264 QTELQAIDEEIALARNQIAALLGKGPDRGLQITRPTLLANPTPQLPDDLTIG----LIGR 319 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+ ++ + I +AK + P ++L G +L N + + FGP L Sbjct: 320 RPDLVAARWRVEATSKDISVAKKEFLPDVTLTAFAGLASLDPANLLMSVSRTFGFGPTLR 379 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAV 390 LPIF+ G++++N++ + ++ +T+++A++E + + SI D++I T+ + A+ Sbjct: 380 LPIFEGGRLRANLKGKYAQYDIAVASYNQTLVDALREAADTVISIRSVDQQIKTQ-REAL 438 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIG 447 EL + + SL+ Y+ G + L +L+ E + DL + L + L A+G Sbjct: 439 ELAEHAYSLATTRYKAGLGTQLTVLNAESTVLQQRRQATDLQARRLDL---QMGLIKALG 495 Query: 448 SGYN 451 GY+ Sbjct: 496 GGYH 499 >gi|167918731|ref|ZP_02505822.1| Outer membrane protein [Burkholderia pseudomallei BCC215] Length = 437 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/381 (22%), Positives = 174/381 (45%), Gaps = 31/381 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWTRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 283 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 336 Query: 302 SLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 LSL+ S+ G WS G L P+F G + + R A +S + Sbjct: 337 QLSLSASMGHAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQY 396 Query: 359 QETVLNAIKEVENALTSINED 379 ++TVL A ++V + L ++ D Sbjct: 397 KQTVLAAFQDVADKLAALEND 417 >gi|325926736|ref|ZP_08188045.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325542872|gb|EGD14326.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 505 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 92/418 (22%), Positives = 187/418 (44%), Gaps = 21/418 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + D L+ L+ LQ + ++ A R++ A+ I + +A+ PS AS + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLAAADARLHQAQARIGTAQAERGPSLSASGGYTGL-Q 132 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 L + G+ LD + IDL+G +R E+++ +A A+LN+ Sbjct: 133 LPESMVGEELGGSYGGSAQVVLDFRYGIDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLS 192 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y + +A+ L +K +EL+ + + G S+L + + +A + + + Sbjct: 193 SAIAEGYAQLAYAWSLHDLANDELSRAQKTLELTRQRRSAGIDSELQVRQAQARVPAAQQ 252 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + ++ ++ L+G L + + + +PADL+ RPD Sbjct: 253 QLQSAQQQIDEARTALAALVGQGPDRGLDIARP---VLGAGIATQLPSMLPADLLGRRPD 309 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPI 334 + ++ + I +AK+ YPSL+L + + + + FG P L LPI Sbjct: 310 VVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLESGSVFGLVAPALSLPI 369 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK+++N+ +++ + + V+ A++EV + +T++ ++ AV+ Sbjct: 370 FDGGKLRANLAGSDAQYDLAVADYNQKVIAALREVADQVTAVRSLEQRAQAQNDAVQTAT 429 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S L++L ++ ++ + Q + V L A+G G+ P Sbjct: 430 AAFDLAQQRYRAGIGSYLEVLSVQEQLLLARQRMAGLQSQQLLASVRLQRALGGGFTP 487 >gi|312129620|ref|YP_003996960.1| rnd efflux system, outer membrane lipoprotein, nodt family [Leadbetterella byssophila DSM 17132] gi|311906166|gb|ADQ16607.1| RND efflux system, outer membrane lipoprotein, NodT family [Leadbetterella byssophila DSM 17132] Length = 461 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 217/468 (46%), Gaps = 48/468 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL C V +Y +P + + QF S + ++ ++ W E F D L ++ AL Sbjct: 11 ILLQSCFVAKDYKRPDISV-ADQFKAEQVSADSTSLASVSWREFFKDEVLASYIEKALAH 69 Query: 72 NLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQLDS 122 NL I A + +N A+ + +A FP+ S S + +F + + GQ D Sbjct: 70 NLDIRTALQNVNIAEAYMKQGKAGYFPTFSIGPNYTFSRTSANTQFGRITGSQTLGQFDI 129 Query: 123 D----WKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W+ D++G+ R + L S A ++ +I+ + +Y E+ + Sbjct: 130 TGSFAWEADIWGKIRSTKRGFVADYLRSINAHQAVST-QIIAAVANAYFQLSALDEQKQV 188 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + ++ +E + G S++++ + EA + + E+ + E + ++N + +S L Sbjct: 189 LLETISNREEGVETNKSLKVAGIVSEVAVKQNEALLVNAEALLVDTENAIKLNENILSLL 248 Query: 237 LGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 +G ATE + + Q +Y G P L+ NRPD++ E L + + + Sbjct: 249 IGESPRATERGKF---SDASIQQMVYT----GFPVQLLENRPDVKAAEMALVKAFENVNV 301 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL---------PIFDKGKIKSNIR 345 A+S+ YP+L + T + F + F PK + P+++K I++ Sbjct: 302 ARSNFYPALRI------TANTGFQSIDFPKLFDPKSFFVSAVAGLAQPVYNKRAIRTQKE 355 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINY 404 A++S ++ YI +Q+ ++ A KEV +AL + DKKI K + +L+++S+ S Sbjct: 356 VADASQEQAYIAYQKALITASKEVSDALYNYTAADKKISLK-EKEYQLYEESVEYSEELL 414 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + G + L+++ ++ + LSI QL K + V+LY A+G G+ Sbjct: 415 KNGMANYLEVVTAKQNA--LNTKLSIITTQLQKYNATVELYRALGGGW 460 >gi|145299913|ref|YP_001142754.1| outer membrane efflux protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142852685|gb|ABO91006.1| outer membrane efflux protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 457 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/408 (23%), Positives = 185/408 (45%), Gaps = 13/408 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW+ F+D +L++LV+ L N + A R+ +A + PS AS+ N Sbjct: 54 WWQGFHDPALDQLVEAVLAANPDMQVAGLRLRSALLGADFADTNQAPSVSASLGANGTKN 113 Query: 112 LKTNSTGQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSY 164 LK S L +++DL+G R A+ ++ + D+A +L +I K + Y Sbjct: 114 LKDGSASSSMGPSLTLSYEVDLWG-RLASARDQASWEAQASAQDLAATRLMLIGKALEQY 172 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + I++ + L Y + +L+ K+ GA ++L LV+ + + ++++ +L Sbjct: 173 WQLAYLGSAITLGERQLANYTRAEQLTQAKYQAGAITRLDLVQASKQKANKQAELTSLLM 232 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + LLG + + + P+L + GIPAD++ RPD+R E + Sbjct: 233 QQEQARNGLRLLLGRSSGPLEFAPTALTTSPVPSLAV----GIPADVLARRPDVRAAELR 288 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 L ++AK ++ YPSLSL G + T D + N + L LP + K + + Sbjct: 289 LRKTLAKGDEIRTGFYPSLSLTGGASSTSDTLTQVLQNPVGTLSASLALPFLEYNKTRIS 348 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I +E Q +++ + A+ EVE+ L + + ++ + L + K++ L+ Sbjct: 349 IASSELDYQIAETEFRKQLYTALVEVEDGLAARHHGEQRLNYLAEQLTFAKEAEPLAQAR 408 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ G + LD + E+ L +++L + +Y A+G N Sbjct: 409 FQAGATGVQPWLDEQNRLWDAELSLLNQQKELLNTMARIYKALGGSDN 456 >gi|189218912|ref|YP_001939553.1| Outer membrane component of tripartite multidrug resistance system [Methylacidiphilum infernorum V4] gi|189185770|gb|ACD82955.1| Outer membrane component of tripartite multidrug resistance system [Methylacidiphilum infernorum V4] Length = 498 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/471 (20%), Positives = 207/471 (43%), Gaps = 35/471 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLP--------TQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + L GC P+ T+ P+ P T+F + K + WWE F+ +N++ Sbjct: 28 LFLCGCATLPKDTRISTPIEPPQIKQTLSTEFDPSSEKIVKKWPLNNWWEGFHSPEMNRI 87 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPN 111 + IAL +N + + RI+ A R+ PS Y++ F Sbjct: 88 ITIALGKNPDLKASLARIHQAWAVAAGARSRYLPSFYSTQFLFPVPFGVLQLPGSSFFGP 147 Query: 112 LKTNSTGQLD-----SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 NS +++ +DL+G+ + + +++ + A+ +++L + + L YI Sbjct: 148 FGDNSFFFWSVIPALANYHLDLWGEDKARVRAAIGMARATEAEFALSRLFLSTTLASRYI 207 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E + +A + ++ ++L ++ G + L + +E ++++ + +LE+ Sbjct: 208 RLASAEEELELARSGQQIMQELLKLVQMRKKSGIENLLPVHTIEQRLQTVTQQVNSLERE 267 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ I+ L G + ++ + + +F P + P+ +P DL+ RPD+ + + Sbjct: 268 TKILRDEIARLAGQ-SPDWGKTILAKEPHF-PKRF-PLPQSLPLDLLGRRPDVAVSKWRA 324 Query: 286 ADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKI 340 ++ + K+ YP+L SL G L F P + GP LPIF G++ Sbjct: 325 EALAHQVKVTKTAFYPNLDLVSLVGFETLNFATLFLNPALPLLYIAGPAWNLPIFTGGRL 384 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + A+ + T+L+A ++V +AL E K + + + K + LS Sbjct: 385 SAELVVAQEEYNIAVENYNSTLLSAFQQVADALAVWKETDKNLESQEQSTHAAKSNAELS 444 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + D+LD++ + ++ LS + ++ V L++A+G GY+ Sbjct: 445 ARLFSAGINTKTDLLDLQYTLIQSQITLSGRTAEHLEAAVGLFLALGGGYD 495 >gi|299067346|emb|CBJ38543.1| putative outer membrane protein [Ralstonia solanacearum CMR15] Length = 521 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/438 (21%), Positives = 198/438 (45%), Gaps = 29/438 (6%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 LP+Q S+N W + FND L LV A+ + + A R+ A++ + Sbjct: 70 LPSQGGQWPSQN--------WVDQFNDPQLRALVDEAIHDSPNLQVAFARVRASRAMADA 121 Query: 92 VRADLFPS---SYASISHRF--------IP---NLKTNSTGQLDSDWKIDLFGQRRH-IE 136 R DL+PS RF P N T S QL + +D +G+ R +E Sbjct: 122 ARGDLYPSVGLDAEMTRQRFSSYDLFEGTPLGGNWVTESKIQLGVSYDLDFWGKNRAALE 181 Query: 137 SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 S+L++ + A+ ++L + + + +Y+ F + +A + + ++ + LS + Sbjct: 182 SALSDDKAIEAESQASRLMLSTSVARTYVKLAAFYAQRDVAERTIAQRRELVSLSGQRLR 241 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G +++ + A I + ++++ +++ + + ++ LLG L + + + Q Sbjct: 242 AGLDTQVETTQARANIAAAQTELEQVDEQIALARNQLAALLGKGPDRGL-AIARPTLLAQ 300 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTH 313 P +P ++ I DLI RPD+ ++ + I +AK+ P +SL G ++ Sbjct: 301 PTPKLPDHLSI--DLIGRRPDLVAARWRVEAASKNIDVAKAQFLPDISLTAFLGLASIAP 358 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 +N G GP L LPIF+ GK+++N+R + ++ +T+ A+ + + + Sbjct: 359 ENLLLGNARQLGIGPALRLPIFEGGKLRANLRGKYAGYDAAVASYNQTLTEALHDTADQI 418 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 TS++ + + A+ +++ SL+ Y G + L +L+ E + ++ + Sbjct: 419 TSLHSIDTQIDIQRTALAEAERAYSLARTRYGAGLGTQLTVLNAESTVLQQRSLAALLQA 478 Query: 434 QLAKSYVDLYIAIGSGYN 451 + + + L A+G GY Sbjct: 479 RRLDAQMALIKALGGGYT 496 >gi|167845471|ref|ZP_02470979.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei B7210] Length = 572 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/383 (22%), Positives = 178/383 (46%), Gaps = 35/383 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 283 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 336 Query: 302 SLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 337 QLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVD 394 Query: 357 TWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 395 QYKQTVLAAFQDVADKLAALEND 417 >gi|154248089|ref|YP_001419047.1| RND efflux system outer membrane lipoprotein [Xanthobacter autotrophicus Py2] gi|154162174|gb|ABS69390.1| RND efflux system, outer membrane lipoprotein, NodT family [Xanthobacter autotrophicus Py2] Length = 470 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/423 (23%), Positives = 183/423 (43%), Gaps = 33/423 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASIS 105 +WW SF + L + V A NL I AT I A + A L+P S A I Sbjct: 60 EWWRSFRSSDLTRFVAEANVDNLDIAVATAEIVQADAQVGISGAPLYPNLTFAGSAAQIR 119 Query: 106 HRFIPNLKTNSTGQ----LDSDWKIDLFGQRRH--------IESSLANLDSAYAQVDIAK 153 N++GQ L + + +D +G+ R ++ N D +A Sbjct: 120 SSGSSGNPGNTSGQYILGLSAGYMVDFWGKNRSGLLAAEENAAAARFNRDVVTLSTQVAV 179 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 N +++ + R + ++ A +ILD+ K+ +F G S+L + + EA + Sbjct: 180 ANTYFQILGARDQLRIAQNSLAAATRILDIVKR-------QFAGGTVSQLDVSQQEALVA 232 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLI 272 + + IP +E + R N ++ LL A + Q + Q + +P I G+P+DL+ Sbjct: 233 QVRASIPPIEITLRQNWAALAVLL---ARTPVALTPPQGSLSQ--ITVPRITPGLPSDLL 287 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPK 329 RPDI E +L + A++ + P + L G+ + F +++ Sbjct: 288 TRRPDIALAEAQLQAGGYNVEAARAAMLPQIQLTGTGGVQSAALQALFAPGAWYYTLVAG 347 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L PIFD ++S + +A+ + +++ +L+A +VE AL ++++ K V Sbjct: 348 LTQPIFDGYLLQSQLDQAKGVQVQDLQVYRKAILSAFADVEKALVALDQTNKQVKLQADV 407 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 VE + + ++ G +L+ +L ++ E L+ A+ + L+ A+G G Sbjct: 408 VESSRTAFRVAESQLAGGTTTLVAVLQAQQTYFTAENGLAQARLSRLLAATSLFQALGGG 467 Query: 450 YNP 452 + P Sbjct: 468 WGP 470 >gi|325928692|ref|ZP_08189865.1| outer membrane protein [Xanthomonas perforans 91-118] gi|325540949|gb|EGD12518.1| outer membrane protein [Xanthomonas perforans 91-118] Length = 240 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 9/225 (4%) Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ LLG E + S P + PI IG L+ RPD+R E++LA + A Sbjct: 9 YQLAALLGKTPGELPPGVD--SCAHAPAVQQPIPIGDGRALLARRPDVRQAERRLAAATA 66 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 +IG+A + LYP + L GSI T D P TH WS GP + + G ++ +R Sbjct: 67 RIGVATAALYPDIRLGGSIGATGLLADFGEPA--THAWSLGPLISWTLPSSGA-RARVRA 123 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ A + TVL A++EV+ +L+ +D + L+ A + + + + + Y+ Sbjct: 124 TEAGADAALAQFDNTVLQALREVQTSLSRYAQDLDRLHLLEQAQQQAELASAQNRRLYQG 183 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 GR L LD ER A E+ L+ A+ Q+++ + L++A+G G++ Sbjct: 184 GRTPYLSSLDAERTLASAEMTLANAQAQVSQDQIQLFLALGGGWD 228 >gi|323138961|ref|ZP_08074022.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] gi|322395807|gb|EFX98347.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] Length = 520 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 100/484 (20%), Positives = 209/484 (43%), Gaps = 50/484 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------------KWW 53 L +L+GC VGP + P P ++ G N+ + +WW Sbjct: 6 LQAAILSGCAVGPNFIAPAAPQ-GAGYAAGKPANVTQSSPIAGGGAQRLVPGRDIPGEWW 64 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPN 111 F ++ LV A+ + I A + A+E + A P + +++ + + Sbjct: 65 RLFRSKQISALVAEAVTNHPNIAAAEAALRQARETTEADAASFLPQATLGQTVARQQMTT 124 Query: 112 LKTNSTGQ------------------LDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIA 152 + S Q + + D+FG+ R +ES A + Q++ A Sbjct: 125 AQFGSLAQSSSSSGPRALLFSLHNSNVAVSFTPDVFGKTMRTVESDFAAAEYQRFQLEAA 184 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L + + ++ + I + +I + H ++ Y+K +++ +F GA S +V +A + Sbjct: 185 YLALTANVVTAAIADSSYASQIKVTHDLITAYQKQLDILQKRFELGAVSAADVVSEKALV 244 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPAD 270 ++ +P LEK+ + + LG F + + ++ + + +L++P + + + ++ Sbjct: 245 AQAQATLPPLEKARAQTRNQLMAYLG----RFPNDDKGEAIDIE-HLHLPRDLPLSLSSN 299 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFG 327 L+R RPD+ E KL + A +G+A +++ P ++L GS A F + ++ Sbjct: 300 LVRQRPDVLSAEAKLHQASADVGVATANMLPQITLTGNGGSQASNFSQLFLPETSVYNLA 359 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQY-ITWQETVLNAIKEVENALTSINEDKKIVTKL 386 +L FD G++ R A+ +A EQ ++ TV++A + V +AL +I D + + Sbjct: 360 AQLSGQAFDAGRLFHQ-REAKLAALEQAEAQYRATVISAFQNVADALQAIKHDAETLRSQ 418 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 A + +S+++S Y G + +L+ + ++ A+ L A+ Sbjct: 419 VAAEKAAAESLNISQAQYSAGSTTYPTVLNAAQTLLNARINRVQAQAARFSDTAALMQAL 478 Query: 447 GSGY 450 G G+ Sbjct: 479 GGGW 482 >gi|160898725|ref|YP_001564307.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160364309|gb|ABX35922.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 484 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/420 (23%), Positives = 192/420 (45%), Gaps = 35/420 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASIS 105 +WW++F T L +V+ A Q+L + A R+ A+ A L PS ++ Sbjct: 58 QWWQAFGSTELGGMVQAAQDQSLDMAAAMARVRQAEAATRQAGAALLPSLNGELRAQRMN 117 Query: 106 HRFIPNLKTNSTGQ-LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 H + + + G L + +++D +G+ R +++ A ++ D +L V +++ Sbjct: 118 HAQVAGGQASVYGAALTASYEVDFWGRNRATRDAAAAAWQASRFDQDTVRLTVTAQVAHG 177 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 ++ A +ER +IA + + ++ + L + GA ++L L + + S + TL Sbjct: 178 WLQAVALRERQAIAARNVANAERLLGLVESRARAGAATQLELAQQRGLVASQRQALATLR 237 Query: 224 KSFRMNVHNISTLLGYP-----ATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPD 277 + ++ LLG AT+ L +Q +P I G+P L++ RPD Sbjct: 238 RQGEDADATLAVLLGQARRPALATDSLQALQ-----------LPEIGAGLPTQLLQRRPD 286 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP------KLY 331 I E +LA + A + A++ L+P L+L GS + G + W P L Sbjct: 287 IANAEAQLAAASANLQAARAALWPRLTLTGSA-----GTSAGRASDWLREPVYSLLAGLA 341 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIFD G++ + A++ +E + ++++ A +V+ AL +++ K + Sbjct: 342 GPIFDGGRLAAERDGAQARREELLAGYYKSIVAAYGDVDLALNAVHGLKAQAEAQAEVLA 401 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++SL+ + Y+ G SLL +L + + D + + ++ V LY A+G G+ Sbjct: 402 QARQAVSLAELRYKAGAESLLSLLQAQTTLYAAQDDAVLQRLLQLQARVALYRALGGGWE 461 >gi|120609026|ref|YP_968704.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1] gi|120587490|gb|ABM30930.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1] Length = 556 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 39/354 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW F D L+ L++ AL Q+ + A RI A+ RA P S + R+ Sbjct: 91 WWRGFGDAQLDALIEQALSQSPDLKLAEARIARAQAFTEGTRAADRPQVNGSLDATRQRY 150 Query: 109 IPN----------LKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 N K ++TG+L W++D FG+ R I++++ + ++A A A++ + Sbjct: 151 SSNSIYPPPLGGSTKNSATGRLTGSWELDFFGKNRAAIDAAVGSANAAIADAQAARVLLA 210 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ Y++ + ++ +A + L+ + + L + G ++L + E + Sbjct: 211 SNVVRQYVELARVEAQLGVAQRTLEQRTQTLALVRDRVAAGLDTRLEERQSEGSLPEARQ 270 Query: 218 DIPTLEKSFRMNVHNISTLLGYPAT---------EFLHYMQKQSNNFQPNLYIPINIGIP 268 I L + M + + L+G P LH + + Sbjct: 271 QIEALREQAAMARNALDALVGQPGAAQALVPPPLSSLHAIALPAALPA------------ 318 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWS 325 DL+ R DI ++ + + +AK+ YP++SL + L DN G + W Sbjct: 319 -DLLGRRADIAAARWRVEAATQDVAMAKAQFYPNVSLTAFVGLASLGLDNFVKGGSREWG 377 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 GP + LPIF+ G++++N+R + ++ T+L+A+ E ++ D Sbjct: 378 VGPAIRLPIFEAGRLRANLRGKAADVDAAVESYNATLLDALHEAAGQSATLTAD 431 >gi|56710285|dbj|BAD81003.1| putative fusaric acid resistance protein fusA precursor [uncultured bacterium] Length = 480 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 103/478 (21%), Positives = 209/478 (43%), Gaps = 31/478 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPH----MPLL-PTQFSIGNSKNLINIDTLK--WW 53 M + ++ L ++LA C P + P P L T ++ + + D L WW Sbjct: 5 MPVKPGLWLLSGIVLAACAPLPAVSPPRPEVARPALRQTLAAVAGTPAFRSTDRLSRTWW 64 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR---- 107 +F D +L+ LV +AL+ + T+ A RI+ A++ V + P SS AS+ + Sbjct: 65 STFGDKALDDLVDMALRGSPTLATARARIDQARQAARLVEIESGPRYSSDASLVRQHLSE 124 Query: 108 ---FIPNLKTNSTGQLDSD----WKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISK 159 F P + + + D + +D +G+ R ++S++ +A A A+L + + Sbjct: 125 NGLFPPPMGGTTLNEGDVSVGIAYALDWWGKNRALLQSAVGESRAAEADRGAAQLALAGE 184 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y + + R+ +A Q ++ + L+ + +G S L ++E + + + Sbjct: 185 VADAYFNWQDIVARLRLARQAVEKRSMALRLADSRLKRGIDSALPFSQMEVLLAEEQDKL 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 LE R+ ++ L G + + P P+ +P D + RPD+ Sbjct: 245 KDLEMQSRLLRDRLAALTGNGPDWAAGLAEPAPSAAVP---FPLPQKLPLDWLARRPDLV 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFD 336 + + + +I A++D YP++ L + L N + + SFGP L++P+F+ Sbjct: 302 ALKWRAEAAAQRIEGARADFYPNVDLRLLLGLQDIDLGNWLTAKSRYGSFGPALHIPLFN 361 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQH-AVELHK 394 +++++ E+ + + ++ A +V +AL ++ D + +LQ A + Sbjct: 362 VRTLRASLGMREAEYAAAVAQYNQALVTAASQVADALARVSALDAR--ERLQRSATASAE 419 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ L + G L +LD E AT S + ++ L++A+G GY P Sbjct: 420 RTQQLQAARFASGLSDRLPLLDGEIATLAQHARESSLQADRKRAMAMLFLALGGGYEP 477 >gi|325298682|ref|YP_004258599.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] gi|324318235|gb|ADY36126.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides salanitronis DSM 18170] Length = 458 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 109/460 (23%), Positives = 211/460 (45%), Gaps = 39/460 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLKWWESFNDTSLNKLVKIAL 69 + LL C + Y +P + + K ++ L W E F D L L++ AL Sbjct: 11 VCLLGSCGIYNRYERPELSVAADSLYRTEVKADTASSVADLSWKELFTDPYLQALIQQAL 70 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQL--DSD 123 + N + A ++ + ++S + PS ++S + K + T ++ + Sbjct: 71 EMNTDLRIAYLKVKEMQAQLVSAKLAYLPSVQLDPQGTLSS--LDGSKASKTYEVGASAS 128 Query: 124 WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID+FG+ + + S+ A L+ + A + +I+ + SY E+ I + + Sbjct: 129 WEIDIFGKLTNAKRSARAALEESDAYRQAVQTQLIATVADSYYTLLMLDEQERITSETVA 188 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +K + ++ G + ++ + EA S E+ + +L++ +++S++LG Sbjct: 189 SWKDYVHSLYVLMQAGEADRATVSQAEASRASAEASLLSLQQQIAETENSLSSVLG---- 244 Query: 243 EFLHYMQKQ--SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 E H +Q+ SN P ++ G+P +L+ RPDIR E L + A++ Y Sbjct: 245 EVSHRIQRGNLSNQRFPQ---RLSTGVPLELLSRRPDIRQAEAALKQAFYATNQARAAFY 301 Query: 301 PSLSLNGSIALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 PS++L+GS T++ + PG + G L PIF++G+ +N++ A++ +E + Sbjct: 302 PSITLSGSAGWTNNGEAVVTNPGSWLLQAIG-SLVQPIFNRGQNIANLKTAKAQQEEALL 360 Query: 357 TWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 T+++++L+A KEV NAL I D++ V LQ V + M NY Sbjct: 361 TFRQSLLDAGKEVNNALIQWQTARERIRLDEEQVKHLQTTVHDTELLMEYGTTNY----- 415 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L ++ +D + Q + ++LY A+G G Sbjct: 416 --LQVLTARQSLLSARLDCASDCYQEIQGVINLYHALGGG 453 >gi|257091784|ref|YP_003165425.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044308|gb|ACV33496.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 500 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 192/460 (41%), Gaps = 43/460 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN--LT 74 GCT KP + + P +F G + ++ + WWE F D L L++ A Q+N + Sbjct: 27 GCTT--PVLKPSLDV-PDRF--GAATAPVDEPEVAWWEGFKDPVLADLIRRAAQENRDVK 81 Query: 75 ILQATERINAAKENILSVRADLFPS------------SYASISHRFIPNLKTNSTGQLDS 122 I R A E I R+ LFP+ +Y S+ +P Q+ Sbjct: 82 IAAERLRAARAGETI--SRSWLFPAVGLAGDAFDHKTNYDSVLKSVVPEAANTKAAQIGV 139 Query: 123 D--WKIDLFGQRRHIE-----SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DLFG+ R +LA + A +L V+S + +Y ++ Sbjct: 140 GVTWEVDLFGRLRAGAAAAAADTLAVENGARG----VRLLVLSDVATNYFKLTGALRQLE 195 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 I + + L + G + + + + E + IP LE ++ H I+ Sbjct: 196 TVRAIAAAQDETLRLVTARQRVGLATAFDVERAQTEASRARAAIPPLETLAAVSRHRIAV 255 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G A P P G PA L++ RPD+ +L + A+ A Sbjct: 256 LIGGQAFRAASITPSTVEATVP----PARPGQPAALLQRRPDLLAASAQLDAANARRQQA 311 Query: 296 KSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 ++ +P L L SI L + P T+ L +PIF+ G+ ++ AES Sbjct: 312 MAEWFPRLVLGAVFGRESIELNGSDLGPARFTN--VAAMLAMPIFNAGRTQAINDIAESG 369 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E + +++ + A+++VEN L ++ ++++ L A ++ + Y +G+ Sbjct: 370 QREAVLRYEDAIARALEDVENTLVALADERQRAQALNSAAASADAALGRAQSLYDRGQID 429 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 LL +LD +R V V + A QL V LY A+G G+ Sbjct: 430 LLPLLDAQRVRLSVRVGANDANTQLLLDSVQLYKALGGGW 469 >gi|229591411|ref|YP_002873530.1| outer membrane efflux protein [Pseudomonas fluorescens SBW25] gi|229363277|emb|CAY50379.1| outer membrane efflux protein [Pseudomonas fluorescens SBW25] Length = 467 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/470 (21%), Positives = 209/470 (44%), Gaps = 46/470 (9%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFNDTSLNKLV 65 VLL+ C H P L + + S D + WW F LN+LV Sbjct: 11 LCVLLSACA-------GHPPALDSGIAAPASWQYAERDAAQATNQHWWTQFGSAQLNRLV 63 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFI------PNLKT--- 114 + A + + + AT R+ A+ + + A L P ++ SH+ + P+L Sbjct: 64 EQARRDSFDVAAATARVRQAQASAVIAGAPLLPEVKFNLATSHQKLLRGQGGPDLDVSQS 123 Query: 115 -----NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N L + +++D +G R +S+L +L ++ +L ++S + Y Sbjct: 124 DDAVDNFGANLTASYEVDFWGGRAAARDSALHSLRASEFDQATVELTLLSSVADRYAQTL 183 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +R IA L + ++L ++ G+ + L L + ++ + S + +P +++ Sbjct: 184 AAHQREQIAALNLANARNVLDLVQTRYDAGSATALELAQQKSLVASQQRQLPLIQQLAEE 243 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ LLG P + + ++ FQ + I G+P+ L+ RPDI E +LA + Sbjct: 244 SRITLAALLGQP----VQALNLRAEPFQALTWPTIGAGMPSQLLSRRPDIAKAEAQLAAA 299 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNI 344 A + +A++ + P+++L ++ +++ + +++ L PIF+ G++ + Sbjct: 300 QADVTVARAAMLPAVTLGATLG---SDAYKAMDILRSPYYTLTAGLVGPIFNNGRLSAER 356 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +A + E T++ ++N +VE AL+SI + ++ + + ++ Y Sbjct: 357 DKARARQDELLHTYRGAIINGFADVEKALSSITRLDQQRQWQSEELQQAQSAFQIAESRY 416 Query: 405 RQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G LL +L+ +R A V L +A+ Q + + LY A+G G+ Sbjct: 417 QAGAEDLLTVLETQRTLYAAQDQNVQLRLARLQ---ASIALYKALGGGWQ 463 >gi|167560929|ref|ZP_02353845.1| RND efflux system, outer membrane lipoprotein, NodT family subfamily [Burkholderia oklahomensis EO147] Length = 494 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 107/459 (23%), Positives = 206/459 (44%), Gaps = 38/459 (8%) Query: 21 GPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GP+Y +P + P + I + D WW ++D LN L+ N T Sbjct: 31 GPDYHRPDAAIPAAYKEAPPGWKIAQPAD--RADRGPWWTIYDDPQLNALIDKLNTSNQT 88 Query: 75 ILQATERINAAKENILSVRADLFPS------------------SYASISHRFIPNLKTNS 116 + Q A+ + RA FP+ S + + R I N T S Sbjct: 89 VAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSSSSASRSTTRTIGN--TYS 146 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G LD+ W+ DL+G+ R + + A+ +A A + A+L+ + L +Y R Sbjct: 147 VG-LDASWEPDLWGKVSRTVGAQKASEAAAAADLANARLSAQATLAQTYFQLRAADATQK 205 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 206 LLDDTVASYQKSLQLTQNQYAQGVAARSDVIQAQTQLQSAQASAIDNGIARAQYEHAIAT 265 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G PA+ F + +P +PI++ P+ ++ RPD+ E++ A + +IG+A Sbjct: 266 LVGEPASTF--SLSPMPLTAEPPA-MPIDV--PSAILERRPDVAAAERRAAAANEQIGVA 320 Query: 296 KSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + +P+L+L+ S F WS GP+L +FD G + A ++ Sbjct: 321 IAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAGLRAAQTEAARATYD 380 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + T++ VL+A ++VE+ L S ++ + + AVE + ++ +++ Y+ G L Sbjct: 381 QDVATYRAAVLSAFQDVEDNLASQRILEQEIGVQRQAVESAQHALDITLNQYKAGTVGYL 440 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++L + LS Q S V L A+G G++ Sbjct: 441 NVLTAQTTAFSARQKLSTISGQRMVSSVGLVKALGGGWD 479 >gi|28869361|ref|NP_791980.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852602|gb|AAO55675.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 467 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/422 (22%), Positives = 190/422 (45%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 53 QWWQRFGSAELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 112 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L L ++ +L Sbjct: 113 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASEFDQATVELT 172 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + ++L +F G+ + L L + + + + Sbjct: 173 LLSNVADRYAQTLAAREQGRIAGLNLANAQSVLKLVQTRFDSGSATALELAQQKNLVATQ 232 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + +++ F + I G+P++L+ R Sbjct: 233 QRELPRIQQLANEQLITLAALLGQP----VQHLKLSDQGFDTLNWPDIGAGVPSELLTRR 288 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +L + A + +A++ + P L+L+ + + + S L PI Sbjct: 289 PDLAKAEAELTAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 348 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + RA + QE T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 349 FNNGRLGAERDRALARQQELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 405 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 406 QAQTAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARVQ---TSIALYKALGG 462 Query: 449 GY 450 G+ Sbjct: 463 GW 464 >gi|113460889|ref|YP_718956.1| outer membrane protein [Haemophilus somnus 129PT] gi|112822932|gb|ABI25021.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 461 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/415 (23%), Positives = 186/415 (44%), Gaps = 25/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW +ND LN+LVK AL+ N + +AT +N A N V ADL P + ++ Sbjct: 50 WWTQYNDEPLNQLVKQALKNNKDLAKATIAVNTALYNANLVAADLVPNFTRQTGVNSSAA 109 Query: 110 PNLKTNST------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLI 161 N+ T S G L+ + +DL+ QR ++S A + Q D+ KL++I+ ++ Sbjct: 110 KNINTGSNSKITHGGSLNISYTLDLW-QRLADKTSAAKWTHSATQQDLQATKLSLINSVV 168 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + I++ +Q ++ Y K + KF QG + S + + I +++ Sbjct: 169 TTYYQLAYLNDAIAVTNQTINYYSKISRIMQNKFKQGMADRASTDQSQQSILKARNNLIN 228 Query: 222 LEKSFRMNVHNISTLLGYPATEFL-----HYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + + LL E L H ++ +S +N+ IP I NRP Sbjct: 229 YQTQKKRAETTLRNLLNLKPNEDLNIKTPHILEVKS--------AEVNLDIPLSTIANRP 280 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIF 335 DI+ +L + + +PS++L ++ + + +N + G + LP Sbjct: 281 DIKGSLYRLNSAFKNAKAMQKSWFPSITLGAGLSSSGNKIDNAFNIPIATGTVGINLPFL 340 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K N++ +E++ + +++++ + A+ E++N S + K+ V LQ +K+ Sbjct: 341 NWNTVKWNVKISEAAYENAKLSFEQNITKALNEIDNLYFSYTQAKENVANLQETYRYNKR 400 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L++ L+ ++ + AK L +S +Y A+G Y Sbjct: 401 ITQYYKNRYDAGIAELIEWLNAANMENASQLAILNAKYSLIQSQNAIYSAMGGYY 455 >gi|324114703|gb|EGC08671.1| outer membrane efflux protein [Escherichia fergusonii B253] Length = 300 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 153/304 (50%), Gaps = 19/304 (6%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + SY + + ++ IA + L Y+++ + G+++ L+L + I+S Sbjct: 5 LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIEST 64 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 SDI + + + LLG + Q Q+ N + + G+ + ++ R Sbjct: 65 RSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQR 120 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYL 332 PDI E+ L + A IG A++ +PS+SL I+ + F + W+F PK+ + Sbjct: 121 PDIMEAERALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEI 180 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHA 389 PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +AL S+N+ ++ Q Sbjct: 181 PIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQ---ISAQQRY 237 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + + ++ + Y+ G S L++LD ER AT + +DL+ A RQ+ + V LY A+ Sbjct: 238 LASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNE--VSLYTAL 294 Query: 447 GSGY 450 G G+ Sbjct: 295 GGGW 298 >gi|170717438|ref|YP_001784537.1| outer membrane efflux protein [Haemophilus somnus 2336] gi|168825567|gb|ACA30938.1| outer membrane efflux protein [Haemophilus somnus 2336] Length = 461 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/415 (23%), Positives = 185/415 (44%), Gaps = 25/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW +ND LN+LVK AL+ N + +AT +N A N V ADL P + ++ Sbjct: 50 WWTQYNDEPLNQLVKQALENNKDLAKATIAVNTALYNANLVAADLVPNFTRQTGVNSSAA 109 Query: 110 PNLKTNST------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLI 161 N+ T S G L+ + +DL+ QR ++S A + Q D+ KL++I+ ++ Sbjct: 110 KNINTGSNSKITHGGSLNISYTLDLW-QRLADKTSAAKWTHSATQQDLQATKLSLINSVV 168 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + I++ +Q ++ Y K + KF QG + S + + I +++ Sbjct: 169 TTYYQLAYLNDAIAVTNQTINYYSKISRIMQNKFNQGMADRASTDQSQQSILKARNNLIN 228 Query: 222 LEKSFRMNVHNISTLLGYPATEFL-----HYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + + LL E L H ++ +S +N+ IP I NRP Sbjct: 229 YQTQKKRAETTLRNLLNLKPNEDLNIKTPHILEVKS--------AEVNLDIPLSTIANRP 280 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIF 335 DI+ +L + + +PS++L ++ + + +N + G + LP Sbjct: 281 DIKGSLYRLNSAFKNAKAMQKSWFPSITLGAGLSSSGNKIDNAFNIPIATGTVGINLPFL 340 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K N++ +E++ + + +++ + A+ E++N S + K+ V LQ +K+ Sbjct: 341 NWNTVKWNVKISEAAYENAKLNFEQNITKALNEIDNLYFSYTQAKENVANLQETYRYNKR 400 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L++ L+ ++ + AK L +S +Y A+G Y Sbjct: 401 ITQYYKNRYDAGIAELIEWLNAANMENASQLAILNAKYSLIQSQNAIYSAMGGYY 455 >gi|330818318|ref|YP_004362023.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|327370711|gb|AEA62067.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] Length = 518 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/423 (22%), Positives = 183/423 (43%), Gaps = 26/423 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 TL W F D L KL+ A+ N +I QA R+ A I S RA L P A+ S Sbjct: 62 TLDWASQFGDPQLPKLIDEAIAGNPSIAQAQARLAKASSYIESSRAALMPKVDANYSWTR 121 Query: 108 --------FIPNLKTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + P N + + W++DL+G+ R + S+++ +A A+V A++ Sbjct: 122 ELYSGNGLYPPPYGGNWYSENNVLASASWELDLWGKNRERLRSAVSQQKAAQAEVQQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + +Y IA + + + ++ + G + + + + Sbjct: 182 TLAVSVARTYNQLAQLYALRDIAQREIGNRETVGRITEGRVGAGLDTNVERQTARGNVAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ES + L+ + ++ LLG L + +P + + IPADL+ Sbjct: 242 SESSLSELDGQITTTRYQLAALLGKGPDRGLAIA---TPVLKPGGAVELPGNIPADLVAR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+ ++ ++ + AK++ +P ++L G A + FGP ++ Sbjct: 299 RPDLIAARWQVEGAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGQFLKFASRQAQFGPAVH 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G +++ ++ + + +T++ A+ +V + SI K + Q A++ Sbjct: 359 LPIFDAGALRAQLKGRYADFDLDVANYNQTLIGALNDVATQVASIRALDKQMGDAQRALD 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGS 448 ++ L++I Y+ G L +L DI R A+ V +L + +R L + L A+G Sbjct: 419 AQTRAYDLAVIRYKAGLAPQLQVLSADINRLGAEQTVTNLVMRRRDL---QIGLISALGG 475 Query: 449 GYN 451 G++ Sbjct: 476 GFD 478 >gi|325521744|gb|EGD00494.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 450 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/407 (24%), Positives = 180/407 (44%), Gaps = 26/407 (6%) Query: 20 VGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLTI 75 VGP+Y +P + + P +S G ++ + D K WW +F+D L++L + N T+ Sbjct: 39 VGPDYHRPVVSI-PATYSELPGWTRAAPDADGPKGDWWTAFHDPLLDQLEPLVAVSNQTV 97 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG----------QLDSDWK 125 Q A + RA LFP+ A+ S + +++TG + W Sbjct: 98 RQDYYNYQQALALVREARAGLFPTLSATTSATRQRSTGSSATGGAAISNSSALEGTVSWS 157 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 DL+GQ RR +E A+ S+ A + A L+ L + ID R + + + Sbjct: 158 PDLWGQVRRTVEERNASAQSSAATLANATLSEQVTLATTLIDLRVTDANLDLLAATVKAD 217 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + + + + G LV + ++ S + + L S VH I+ L+G E Sbjct: 218 EDYLRVIADQDRAGTIPPSDLVSAQTQLDSARASLVALGVSRAKYVHAIAVLVGR-NPED 276 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L + P+ + +G+P+ L++ RPDI E+++A+ A IG+A + YP++S Sbjct: 277 LDIPHDATLPSLPD----VPVGVPSTLLQRRPDIAVAERQMAEENAAIGVAVAAYYPTVS 332 Query: 305 LNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+ ++ + + G N WS G +FD G+ + A+++ ++ Sbjct: 333 LSAAVGFSA-SPIAGLLHVANYVWSLGTSASETLFDGGERSGEVAAAKAAYDAAVANYRG 391 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 TVL A++ VE+ L S L+ AV K+ ++ YR G Sbjct: 392 TVLAALQNVEDDLASARVLADQAAVLERAVTNAKRGADIAFNEYRAG 438 >gi|221066134|ref|ZP_03542239.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220711157|gb|EED66525.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 475 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 199/461 (43%), Gaps = 43/461 (9%) Query: 18 CTVGPEYTKPH----MP-LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 C+ + +P +P L P ++ NS L W + + D L +L++ AL N Sbjct: 16 CSTSVQMLQPQAQARLPGLWPQAWTQQNSA----AAPLAWQDFYADPVLQQLIEAALAHN 71 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLDSD------ 123 A R+ A+ A P+ SH R +L + + D Sbjct: 72 QDQRLALLRVQEAQAAYGIQSAARLPTIGLGSSHARARVPADLNASGRSVVAGDQEVFVG 131 Query: 124 ---WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERIS 175 W++DL+G+ + + +++L N Y +D + V S LI +Y+ ER++ Sbjct: 132 LNSWELDLWGRVKSLSDAALGN----YLALDATQHAVQSSLIKQVALNYLALSSLDERLA 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + + ++++ + + G+TS+ +L +++ + + L + + + + Sbjct: 188 LTERTIASREESLRIFKRRTEVGSTSRYALTQVQTLVHQAKLIGTQLAQQRALQANALQQ 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G A + N P+ G+P+ L+ RPDI E L + A + A Sbjct: 248 LTGLDAERLPQRLSTPVN------LKPVAEGLPSALLTQRPDIIAAEYGLQAAKANVAAA 301 Query: 296 KSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ P ++L GS D F G + W F P + LPI D G+ ++N+ Sbjct: 302 RAAFLPRIALTGSWGTASAELDGLFKGGSRAWQFVPSISLPILDGGQRQANLDLQAVRQN 361 Query: 353 EQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++T+ A++EV +AL+S + E +++V Q A K+ L+ + Y QG Sbjct: 362 IAVVQYEKTIETAMREVLDALSSRSTLEQQQLVLTEQRAA--LKERARLARLRYDQGASP 419 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LD+LD ER E L + L + V LY A+G GY Sbjct: 420 YLDVLDAERDLLSAEQQLVQGREALLSTQVALYAALGGGYT 460 >gi|134094170|ref|YP_001099245.1| putative outer membrane protein [Herminiimonas arsenicoxydans] gi|133738073|emb|CAL61118.1| putative outer membrane protein [Herminiimonas arsenicoxydans] Length = 469 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 104/463 (22%), Positives = 217/463 (46%), Gaps = 30/463 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ LF V +GC + +KP++ + T + + + D WW F L+ L+ Sbjct: 15 AVAVLFAV--SGCAHNIDASKPNVEIPATWAEVAPAGIELQRD---WWRGFGSNELSALI 69 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPN------LKTNS 116 +L + ++ A ER+ A+ S A LFP S + + + P ++ S Sbjct: 70 DQSLAGSPDLIIAAERVTQAEITASSAGASLFPLLTVSAGTDTGQVKPGPTGSGWARSES 129 Query: 117 TG-QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L ++++D++G+ S+ A+L+++ ++ +L + + + +Y + ++ Sbjct: 130 TGVALSVNYEVDVWGRVAATTRSANASLNASRYDLETVRLTLTTGVANAYFQTLALRMQL 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + L + +K + ++ GA S L + + + + + + I L+ R V ++ Sbjct: 190 QVAQENLAIAEKLFSIVEARYRFGAASALDVSRQRSTVLAQRATILPLQVQERQTVSALA 249 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG +Q + + L IP ++ G+P+ LI RPD+ E +L A + Sbjct: 250 ILLGRQP----QALQVAALSLD-TLAIPEVSPGLPSTLITRRPDVASVEAQLLAGSANVA 304 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAESSA 351 A++ L P++SL GS N +S G + +FD ++ + ES+ Sbjct: 305 AARAALLPTISLTGSAGNASAALLTLGNPAYSIGIAASIVQTLFDGNSLRLRVETNESTR 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMINYRQGR 408 ++ +++ TV A+KEV++AL + +++ + Q + + K ++++LS + YR+G Sbjct: 365 RQLAESYRRTVYTALKEVDDALGNATRNRE---QEQAQIAIKKEAERALALSELRYREGA 421 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +LD +R + L+ + D++ A+G G++ Sbjct: 422 DDLNSLLDAQRTLFAADDKLTQLRLLRLTGTTDVFKALGGGWS 464 >gi|326802254|ref|YP_004320073.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] gi|326553018|gb|ADZ81403.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] Length = 471 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 107/472 (22%), Positives = 223/472 (47%), Gaps = 42/472 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L +V ++ C V + + P L P F I ++ + +I W F D +L L+ Sbjct: 12 LVLVAISACKVSKDVSVPQENL-PDTFRNAEQIADTASFADIS---WKAVFTDQTLVLLI 67 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----------------RFI 109 A+ +N + A + I+AA+ + V+ + PS ++S +F+ Sbjct: 68 DKAIAKNHDMQLALKNIDAAQLMVKQVKWNHAPSVGVNVSGSTANPSDNSLNGLTLGQFL 127 Query: 110 -PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYID 166 N + + L W+ D++G+ R +++LA L + A+ I + N+++ + Y Sbjct: 128 GTNHIEDYSANLTLSWEADIWGRIRSQSKAALAQYLQTQEARKAI-QTNLVASIAQGYYR 186 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 F E++ IA + LDL + + L++ G + +L + +A+ + +P LE+ Sbjct: 187 LLMFDEQLRIAKRNLDLNDSTLRIVRLQYDAGLVTLAALQQSQAQRMEVAQLLPQLEQRI 246 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEK 283 + + + L G PA ++ P +N GIP L+ RPDI+ QE Sbjct: 247 ILQENALQLLTGELPAP-------LNRKGLLDDITFPDTLNAGIPIRLLSRRPDIKSQEL 299 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKGK 339 +L + AK+GI+K+ +YP+L + S L + + T S FG ++ PI + + Sbjct: 300 ELTVANAKVGISKAAMYPTLRITASGGLNSLEASDWFKTPSSLFGVVAGSVFQPILQQKQ 359 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ + ++ I ++++VL A+ EV +AL I + ++ + V+ +++ Sbjct: 360 MRTQYKLTLVEREKSVIKFRQSVLVAVGEVSDALAKIEKLRQTQSIAVDRVDALQQATFN 419 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++ G+ + L+++ + K E++L+ K + + +LY ++G G+N Sbjct: 420 ANLLFKNGKANYLEVIVAQGNVLKGELELAEIKTSMLSAVSELYRSLGGGWN 471 >gi|307726718|ref|YP_003909931.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307587243|gb|ADN60640.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 509 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/417 (24%), Positives = 186/417 (44%), Gaps = 29/417 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 W F D L +L++IAL N + A + + RA L P+ A+ S R Sbjct: 101 WRSFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPTIAATGSMTRERT 160 Query: 109 IPNLKTNSTGQLDS-DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYI- 165 + ++S + + W+ID FG+ R ++ +L N + A ++++I+ + Y+ Sbjct: 161 QGAIASSSDVSVGTTSWEIDFFGRLRSLKRQALENYLATDASRHSTQISLIATVATDYLT 220 Query: 166 ---DARHFK---ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 D R + + + D+ ++ EL G S L + + + + S ++ + Sbjct: 221 LLADERLLQLTEDTVKSDQATYDVTRRVQEL-------GNASLLDVQQAQNSLASAKASL 273 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + ++ + +N++ +LG P + L + + ++ I G P+ L+ RPDI Sbjct: 274 ASYRRAVAQDRNNLAAVLGAPIPDDLPPARTFDDE---TMFADIGAGAPSLLLTRRPDIV 330 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFD 336 E L + A IG A++ +P + L S + N F W+F P + +PIFD Sbjct: 331 QAEHALKAANANIGAARAAFFPKIELTASAGTSSSALSNLFKAGTGAWTFAPSVSVPIFD 390 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G K+++ A+ Q + ++ + A KEV NALT+ V + V + Sbjct: 391 YGSNKASLDVAKIEKQIEVADYESAIQTAFKEVANALTARATYVDQVQADREYVASAQSY 450 Query: 397 MSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L+ Y+ G S L LD +R TA+ ++ I RQ + V LY +G G++ Sbjct: 451 YTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDILSRQ--SNLVTLYKVLGGGWD 505 >gi|217421828|ref|ZP_03453332.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|217395570|gb|EEC35588.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 635 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 179/388 (46%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPS-SYASISHR----FIPNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ S + R +P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGSQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|77457165|ref|YP_346670.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77381168|gb|ABA72681.1| putative fusaric acid resistance protein [Pseudomonas fluorescens Pf0-1] Length = 499 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/410 (21%), Positives = 185/410 (45%), Gaps = 29/410 (7%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NI 89 L T +I ++ N T +WW+++ D LN + +A+Q + T+ A R+ A+ + Sbjct: 42 LATDEAIAHAARDANWPTAQWWQAYGDPQLNHWIDLAVQGSPTLAMAAARVRQARSLAGV 101 Query: 90 LSVRADLFPSSYASISHR-------FIPNLKTNST-----GQLDSDWKIDLFGQRRHIES 137 L + +++ + P NST L + +DL+G R S Sbjct: 102 AEAAESLQINGESTLKRHNWPTDPFYGPGELANSTTWDNNAALGFSYALDLWG--RESNS 159 Query: 138 SLANLDSAY---AQVDIAKLNVISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHL 193 + +D A+ A+ A+L + + ++ +YI+ + H+ +R I L ++ +EL+ Sbjct: 160 TERAVDMAHMSAAEARQAQLELQNNIVRAYIELSLHYAQR-DIVAATLKQQQQILELAQK 218 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G + + + E + + L++ ++ + I+ L G +Q+ S Sbjct: 219 RLDGGIGTHFEVSQAETPLPETHRQLDALDEEIALSRNQIAALAGKGPGAGAQ-LQRPSL 277 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + L +P +PA+L+ RPD+ ++A I +A + YP++ L GS+ Sbjct: 278 SLGAALKLPS--ALPAELLGQRPDVVASRWQVAAQARGIDVAHAGFYPNVDLVGSLGYMA 335 Query: 314 DNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 G +++ GP + LPIFD G++++ + A + + +T++NA+K Sbjct: 336 TGGGALEFLTGKKLNYNVGPAISLPIFDGGRLRAELGEASAGYDIAVAHYNQTLVNALKN 395 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + + L K T +V +K+ ++MI Y++G L++L+ + Sbjct: 396 ISDQLIRRESMDKQQTFAAESVATAQKTYDIAMIAYQRGLTDYLNVLNAQ 445 >gi|302880078|ref|YP_003848642.1| RND efflux system, outer membrane lipoprotein, NodT family [Gallionella capsiferriformans ES-2] gi|302582867|gb|ADL56878.1| RND efflux system, outer membrane lipoprotein, NodT family [Gallionella capsiferriformans ES-2] Length = 464 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 110/468 (23%), Positives = 205/468 (43%), Gaps = 41/468 (8%) Query: 9 SLFIVLLA---GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 S IV+LA GC++ P Y +P PL K W F D L L+ Sbjct: 5 SALIVMLAALSGCSLAPTYQRPAAPLPAAWPVSAAVKPGAASHMPDWQTYFTDPRLQALI 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRFIPN----L 112 +L+ N + AT RI+ A+ V+AD P +S + + F N Sbjct: 65 SASLEHNRDLRIATARISEARAQYGIVQADRLPNVSLGAQRAASLSPANTSFTGNPFRVQ 124 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + + + L S ++ID +G+ + E++ A+ + A +L++IS + +Y+ Sbjct: 125 RYDVSANLVS-FEIDFWGRVASLNEAARASFLATEAAQRAFRLSLISDVANAYLTVLELN 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER ++A + L + G L +++ E ++ +D L++ + Sbjct: 184 ERSALAQATATGRSDMVSLIRQRRDVGIAGDLDVLQAEGSYQAALADQANLQRQLAAAEN 243 Query: 232 NISTLLG-----YPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKK 284 + +L+G PA L IP + +P++++ RPD+ E++ Sbjct: 244 LLDSLVGKTPAQLPAGRSLALQ-----------AIPADWIADVPSEVLLQRPDVIAAEQR 292 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L S A IG A++ P +SL G++ F + WSF P L LP+FD G+ Sbjct: 293 LIASNASIGAARAAFLPRISLTGALGTASRQLGGLFGAGSQAWSFQPALTLPLFDAGRNS 352 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ + + +++T+ A +EV + L++ + + ++ Q ++ + L Sbjct: 353 ANLDVSRARNVIAVAEYEKTIQQAFREVADLLSARDSLTRQLSAQQANSYTQQQRLKLVD 412 Query: 402 INYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + YR G + L++LD ER A A + +L + + QL ++ LY A+ Sbjct: 413 VRYRAGIANHLELLDAERDAYAAEQGELQVRRAQL-TAFTQLYKALAG 459 >gi|225023682|ref|ZP_03712874.1| hypothetical protein EIKCOROL_00545 [Eikenella corrodens ATCC 23834] gi|224943564|gb|EEG24773.1| hypothetical protein EIKCOROL_00545 [Eikenella corrodens ATCC 23834] Length = 482 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 107/441 (24%), Positives = 197/441 (44%), Gaps = 26/441 (5%) Query: 32 LPTQFS-IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LP F G + + N+ +WW+ + D L L++ LQ N +I A R+ A+ Sbjct: 31 LPENFQHTGQADSAPNL--ARWWQQWPDPQLGHLIEQGLQYNHSIAIARSRLEEARATSR 88 Query: 91 SVRADLFPSSYASI------SHRFIPNLKTN---STGQLDSDWKIDLFGQRRHIESSLAN 141 ADL PS+ + +HR P L ++ + W+ D+FGQ+R + Sbjct: 89 LAEADLLPSAGLAADAKGYRNHRRDPYLGNGGNLTSASFRAAWEPDIFGQKRSDADAARA 148 Query: 142 LD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 + Q+ ++L V +++ Y+ A H +++ ++ Q L + + +F G Sbjct: 149 AALGSQEQLHGSRLLVSAQIAEHYLRAAHIQQQQTLVSQQLATLHELARYAAGRFNAGHA 208 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNL 259 + + A+I+++++ TL+ F +I+ L+G P T L + +L Sbjct: 209 TAHDTTAITAQIQALQARQSTLQAQFDAQQRSIAVLIGQTPQTFRLDSDAMRQAALLQHL 268 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHD 314 P P+ L+ RPD+R + ++ A++ AKSDL P + G I L D Sbjct: 269 PSPPQGIRPSSLLNQRPDLRARAAEIQARSAQLASAKSDLLPRFDIQFLWQTGRIELNSD 328 Query: 315 -----NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 + G +S G + LP+F G+I +NI+ A++ Q + + +T+L A+ +V Sbjct: 329 LAPFNRARSGNGGLFSIG--VQLPLFTAGRIHANIQAADARLQTALLQYDQTLLQALADV 386 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 +NA + + +LQ A K+ + +R GR +L L + +L Sbjct: 387 DNAYQAQHALNAQQQELQQAERTAKQQVRNDRQLFRYGRKTLDTALQSQLNAHGFSQNLL 446 Query: 430 IAKRQLAKSYVDLYIAIGSGY 450 + + ++LY AIGSG+ Sbjct: 447 DNQLASGLNLLNLYKAIGSGW 467 >gi|85708318|ref|ZP_01039384.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. NAP1] gi|85689852|gb|EAQ29855.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. NAP1] Length = 464 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 106/463 (22%), Positives = 202/463 (43%), Gaps = 37/463 (7%) Query: 11 FIVLLAGCTV------GPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTSLNK 63 F V+L GC E +P LP Q+ + G+ I + W E+ D L + Sbjct: 12 FSVMLGGCATLSTDSDVAEAVSESLPTLPDQWVVDGSVPGEIRV---GWIEAIGDPVLTE 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------- 116 LV A N I A ++AA+ + RA LFP + S +T+S Sbjct: 69 LVFEAQANNRDIRVAAANLDAARALVRQARAPLFPQLNGNFSVD-----RTDSPQPFAIQ 123 Query: 117 ----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T + W++DL+G+ R ++ A+ + A + A+ + + +Y + Sbjct: 124 DPVYTLTAQAQWEVDLWGRVRAGRNAAYASAQAVEADLRFAQYALAQGVASAYFATIEAE 183 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++ +A + +D + + +++ +G S+ ++++ + + S R+ Sbjct: 184 QQVGVAQRTVDALAEIDRIVRVRYREGFASRQDTATAGTDLETARDSLEQAQVSARIAKR 243 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + LLG YPA + ++ P P G+P+ L+ RPDI E+++A + A Sbjct: 244 ALEVLLGRYPADRAIVSVEL------PETPPPPPAGVPSQLLERRPDIIAAERQVAAAFA 297 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + A++ P +SL S T N G + WS + PIFD G + A Sbjct: 298 NLDQARAAQLPLVSLTASGGGTSTDLTNILDGPSLLWSVVGSVLQPIFDGGLRGAQEDDA 357 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +++ + + T L+A ++VEN L + + L+ A E + L+ + Y++G Sbjct: 358 DANRRAAIELYASTALSAFQDVENNLDQVQVLGRRELILETAAEESSTAYILAQLQYQEG 417 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+D+L+I++ E +L +R +V L +A+G + Sbjct: 418 EIALIDVLNIQQRLFAAERNLVSIRRARIDQWVALNLALGGTW 460 >gi|78047056|ref|YP_363231.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035486|emb|CAJ23131.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 477 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 94/427 (22%), Positives = 187/427 (43%), Gaps = 39/427 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + D L+ L+ LQ + ++ A R++ A+ I + +A+ PS S + + Sbjct: 46 WWRALGDAQLDALIAEGLQHSPSLAAADARLHQAQARIGTAQAERGPSLSVSGGYTGL-Q 104 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 L + G+ LD + IDL+G +R E+++ +A A+LN+ Sbjct: 105 LPESMVGEELGGSYGGSAQVVLDFRYGIDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLS 164 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y + +A+ L +K +EL+ + + G S+L +++ ++ Sbjct: 165 SAIAEGYAQLAYAWSLHDLANDELSRAQKTLELTRQRRSAGIDSEL-------QVRQAQA 217 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------IP 268 +P ++ + I A L + Q + ++ P+ G +P Sbjct: 218 RVPAAQQQLQSAQQQIDE-----ARTALAALVGQGPDRGLDIARPVLGGGIATQLPSMLP 272 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG- 327 ADL+ RPD+ ++ + I +AK+ YPSL+L + + + + FG Sbjct: 273 ADLLGRRPDVVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLESGSVFGL 332 Query: 328 --PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 P L LPIFD GK+++N+ +++ + + V+ A++EV + +T++ ++ Sbjct: 333 VAPALSLPIFDGGKLRANLAGSDAQYDLAVADYNQKVIAALREVADQVTAVRSLEQRAQA 392 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 AV+ + L+ YR G S L++L ++ ++ + Q + V L A Sbjct: 393 QNDAVQTATAAFDLAQQRYRAGIGSYLEVLSVQEQLLLARQRMAGLQSQQLLASVRLQRA 452 Query: 446 IGSGYNP 452 +G G+ P Sbjct: 453 LGGGFTP 459 >gi|254226126|ref|ZP_04919723.1| multidrug resistance protein, putative [Vibrio cholerae V51] gi|125621361|gb|EAZ49698.1| multidrug resistance protein, putative [Vibrio cholerae V51] Length = 484 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 209/443 (47%), Gaps = 42/443 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIG--NSKNL------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T + +S N ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMWEANELSSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE------NILSVRADLFPSSYAS-ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ I S L S+ S +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASTTESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H L + K +EL ++ G + S+ + +A S+E+++ +++ Sbjct: 194 AELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQE 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRY 280 S ++ + ++ L+G ++ +P++ + G+P++ L+ +R DI Sbjct: 254 SIQLQKNALAALVGQGP-------DHAASIEEPHITLTSRYGLPSEAGVGLLGHRADITA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + ++GIA++ YP ++L+ G A D+ F N + GP +YLP+F Sbjct: 307 ARWRAEAAAQRVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+++ + AE+ QE + T++ A+ EV + +TS + + + AV+ ++++ Sbjct: 367 GRLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINNTEQAVQQAEQAL 426 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 427 HIATNRYQGGLATHLDVLVAEES 449 >gi|70731439|ref|YP_261180.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68345738|gb|AAY93344.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 463 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 42/430 (9%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L+WW F L++L+ A + + A R+ A+ + + A L PS + + Sbjct: 47 LRWWTRFGSPELDQLIAEARAGSHDLAAAMARVRQAQASAIVAGAPLLPSVNGTFNASRR 106 Query: 110 PNLKTNST----------------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIA 152 L+ N++ L + +++D +G RR +S+L + ++ Sbjct: 107 KQLRGNNSSQLDSSSNSTVTNSFDAGLSATYEVDFWGGRRAAYDSALLGVQASEFDQATV 166 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L ++S + SY +E+ IA L + ++L ++ G+ + L L + ++ + Sbjct: 167 ELTLLSGVANSYAQVLSLREQSRIAELNLANAQNVLQLVQTRYDSGSATALELAQQKSLV 226 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--NLYIP-INIGIPA 269 + + +P +++ ++TLLG P +Q N QP L P I+ G+P+ Sbjct: 227 AAQQRQVPLVQQQAEEAQITLATLLGRP-------VQSLKLNDQPFAQLNWPTIDAGVPS 279 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHW 324 +L+ RPDI E +LA + A + +A++ + P+L+L ++ D P YN Sbjct: 280 ELLTRRPDIAGAEARLAAAQADVKVARAAMLPTLTLTANLGSNADKLGNVLRNPFYN--- 336 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L PIF+ G++ + R + QE T++ ++N +VE AL SI + Sbjct: 337 -LTSGLVAPIFNNGRLSAERDRTTARQQELLETYRGAIINGFADVEKALNSIRGLDQQRQ 395 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVE-VDLSIAKRQLAKSYVD 441 + +++ ++ Y+ G LL +L+ +R TA+ + V L +++ Q S + Sbjct: 396 WQSEELNQAQRAFEIAQSRYQAGAEDLLTVLETQRTLYTAQDQNVQLRLSRLQ---SSIA 452 Query: 442 LYIAIGSGYN 451 LY A+G G++ Sbjct: 453 LYKALGGGWS 462 >gi|256823486|ref|YP_003147449.1| NodT family RND efflux system, outer membrane lipoprotein [Kangiella koreensis DSM 16069] gi|256797025|gb|ACV27681.1| RND efflux system, outer membrane lipoprotein, NodT family [Kangiella koreensis DSM 16069] Length = 466 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 109/465 (23%), Positives = 217/465 (46%), Gaps = 28/465 (6%) Query: 4 LRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTS 60 L + +LFI L+GC ++ P+ +P +P+ +I + + + +W F D + Sbjct: 6 LTPLAALFI--LSGCLSMAPDNEQPELPV-AQNLTISEQETDVAEQLMLSEWQNFFTDDN 62 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L+ AL+ N + AT R+ K + P +S +L T + G + Sbjct: 63 AKALIAQALEHNRDLRIATARVAEVKGRYQIQWEEFIPGFRGEVSQTRGRDLSTFTGGSV 122 Query: 121 -----DSD-----WKIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARH 169 D+ +++DLFG+ R + + N A Q + K++VI++ +Y Sbjct: 123 MFNRYDAQVGLVSYELDLFGRIRSLSDAALNQFYATEQAERFVKISVIAETANAYYSWLS 182 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 KE +++A Q L+ +++++L + G S L L + +A + + + LE+ + ++ Sbjct: 183 AKENLNLAQQTLNSRQESLDLIQKRKDNGIASDLDLAQAQAALAQVSARKSQLERLYTVS 242 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 N+ L+G P + + Q +L +P NI ++++ +RPD+ E +L + Sbjct: 243 KTNLELLIGTPLNQ-VSMTDSQQMPEMMSLELPDNIS--SNVLLSRPDVLAAEHQLYAAN 299 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PSL L G D+ F G + W+F P + +PIF + + + Sbjct: 300 GNIGAARAAYFPSLRLTGDFGFASNEFDSLFDGDSETWTFMPSISVPIFGNA-LNAQLDV 358 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ ++ ++++T+ A EV + + D ++ L V+ K+ + L+ Y+ Sbjct: 359 AKAQKEQMVASYEQTIQQAFAEVYQLMVNRKSYDDELNANL-DLVKAQKRRLYLAEAKYK 417 Query: 406 QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G S L++L ++ A + L + +LA + V LY A+G G Sbjct: 418 AGLASYLEVLSAQQDLFAAEQAKLESERARLANT-VTLYKALGGG 461 >gi|319952805|ref|YP_004164072.1| rnd efflux system, outer membrane lipoprotein, nodt family [Cellulophaga algicola DSM 14237] gi|319421465|gb|ADV48574.1| RND efflux system, outer membrane lipoprotein, NodT family [Cellulophaga algicola DSM 14237] Length = 471 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 207/461 (44%), Gaps = 22/461 (4%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLV 65 + + +V L GC V +Y +P + + N + +++ + W F DT L++ + Sbjct: 15 LLGVVLVTLQGCFVAKDYKRPELAETEALYRTDNLPMDSVSMADVSWKTMFTDTYLSEYI 74 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNS--TGQL 120 + L+ N+ I A +++ AA+ +A FP+ F N + S TG L Sbjct: 75 EEGLENNMDIRIAIQQMIAAQAYAKQGKAGYFPTLSVGPNYTRQEFSENSQFGSLFTGGL 134 Query: 121 DS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 D+ W+ D++G+ R + +S A+ A K +IS + +Y + Sbjct: 135 DTYDVTADLSWEADIWGKIRSNKRASQADYLQNVAGHQAVKTQLISSIANTYYNLLALDA 194 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ + + + + +E G +++++ + A+ S + +E + + Sbjct: 195 QLKVTKETIATRESGVETIKALKDAGQVTQVAVDQNVAQYNSARALQVDIEAAIFKTENT 254 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 S LLG EF ++ S + Q ++ + +G+P L+RNRPD+ E L Sbjct: 255 FSILLGRTPQEF----ERSSLDTQ-SIDQEMKLGVPTTLLRNRPDVMAAEYALIKDFELT 309 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +A S YPSL+L S L D F + + L P+ ++ K+K+ A + Sbjct: 310 NVANSSFYPSLTLTASGGLQSLELDKLFNANSLFATIVGGLTQPLLNQRKLKTQKEVALA 369 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + + +++T+L A EV NAL S + K ++ VE + + + S + G Sbjct: 370 NQETSLLNFKKTLLVAGSEVSNALYSYEAETKKFEFRKNEVEALRTAEANSEELLKNGYA 429 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + LD+L +++ E+++ +K + + VDLY A+G G+ Sbjct: 430 NYLDLLTARQSSLSAELNIIDSKLKQLVAIVDLYEALGGGW 470 >gi|206559878|ref|YP_002230642.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198035919|emb|CAR51811.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 498 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 97/427 (22%), Positives = 191/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ ALQ N +I QA RI A I S R++L P + AS S Sbjct: 62 ALDWASQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSANGLFPPPYGGQWYSENNALASASWELDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + S + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLASSVARTYNSLAQLYALRDIAQREITNRETVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L + N N+ +P N+ PADL+ Sbjct: 242 TQASLSDLDGQITTVRYQLAALLGKGPDRGLQ-IAAPVMNPSGNVTLPGNL--PADLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ YP ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQMGDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ V +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLAAEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|296158070|ref|ZP_06840903.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295891838|gb|EFG71623.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 498 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 104/425 (24%), Positives = 183/425 (43%), Gaps = 43/425 (10%) Query: 16 AGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 GC VGP+Y +P + LP + D WW +FND L++L + Sbjct: 23 GGCMVGPDYHRPPVATPAAWKELPGWIEAQPAAERPKGD---WWTAFNDPLLDELEPLVS 79 Query: 70 QQNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFIPN------ 111 N T+ Q A + R+ LFP S+ ++S + Sbjct: 80 VSNQTVRQDYANYQQALAEVRLARSALFPTIGINGSATRERSATGNLSSSLLAGGGGASS 139 Query: 112 -LKTNSTGQLDSD--WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + N+ G L+++ W DL+G RR IE S A ++ A + A L+ L + ID Sbjct: 140 FQRINNAGSLEANASWAPDLWGLVRRDIEQSAATAQASQATLANATLSEQIALANAVIDL 199 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R I + +D +++++ + + G LV + +++S +S + L + Sbjct: 200 RVTDANIDLLTHTVDAFEQSLRVVAEQDKAGTVPPSDLVSAQTQLESAQSSLIALGVARA 259 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLA 286 VH I+ L+G + +N P L +P+++ P+ L++ RPDI E+++A Sbjct: 260 QYVHAIAVLVG----RNPEALDVPTNTTLPTLPSVPVSL--PSTLLQRRPDIAAAERQMA 313 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKS 342 A IG+A + YP++SL+ T + G N WS G + +FD G+ + Sbjct: 314 AQNAAIGVAVAAYYPTISLSALDGFTQ-SPLAGLLHIANYVWSLGGQASETLFDGGQRSA 372 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A++S ++ TVL A + VEN L + + L+ AV + ++ Sbjct: 373 QVDAAKASYDAALANYRGTVLTAFQGVENDLAGLRILAQQAEVLERAVRDATRGTEIARN 432 Query: 403 NYRQG 407 Y+ G Sbjct: 433 EYQAG 437 >gi|119896537|ref|YP_931750.1| outer membrane efflux protein [Azoarcus sp. BH72] gi|119668950|emb|CAL92863.1| probable outer membrane efflux protein [Azoarcus sp. BH72] Length = 467 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/422 (22%), Positives = 195/422 (46%), Gaps = 23/422 (5%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------- 98 + D + W F D L ++V +AL N + + I A+ RA+L P Sbjct: 49 SADAVAWRSFFADERLRQVVDLALANNRDLRVSALNIERARALYQIQRAELVPWIGVGGG 108 Query: 99 -SSY---ASISHRFIPNLKTNSTGQLD-SDWKIDLFGQRRHIESSLANLDSAYAQVDI-- 151 S+ A ++ R P + + + S +++D FG+ R + A L+ A D Sbjct: 109 QSAQRLPADLTQRGEPTISRQYSATVGFSSYELDFFGRIRSLRD--AALEQYLATEDARR 166 Query: 152 -AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+++++++ +++ +ER+ +A + + +++ EL+ F GA S + L + + Sbjct: 167 SAQISLVAEAANAWLTLAADRERLDLARRTYETQQQSYELTKKSFDFGAVSAIDLRQAQT 226 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 +S +D+ +++ ++ + G + L ++ +P G+P++ Sbjct: 227 ARESARADLAAYTTQVARDINALNLVAGAAVPDEL-LPTALTDKVSAVGDLPA--GLPSE 283 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFG 327 ++ +RPDI E++L + A IG A++ +PS++L + + F + WSF Sbjct: 284 VLVSRPDILAAERQLRAAYANIGAARAAFFPSITLTAAAGTASASLEGLFKAGSGTWSFA 343 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P++ LPIF G++ +N++ A+ + +++ + +A +EV +AL + + + Sbjct: 344 PQINLPIFQGGRLLANLQVAKVDREIAVADYEKAIQSAFREVADALAERANVGEELDARR 403 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE ++ LS YR G S L +LD +R E L + A + V LY +G Sbjct: 404 ALVEATAETYRLSEARYRSGVDSYLGLLDAQRTLYSAEQGLISVRLADAANRVALYRVLG 463 Query: 448 SG 449 G Sbjct: 464 GG 465 >gi|189426480|ref|YP_001953657.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] gi|189422739|gb|ACD97137.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] Length = 477 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/467 (20%), Positives = 202/467 (43%), Gaps = 34/467 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLP---------TQFSIGNSKNLINIDTLKWWESFNDT 59 +L L+GCT+ P YT+P P+ + + + K L + W E F + Sbjct: 16 ALLAGALSGCTMAPSYTRPDAPVTAGWPSGEAYKAETAKADQKPLAEV---PWREFFVEP 72 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS 116 L K++++AL N + A I + RADL P+ + + R +L + Sbjct: 73 RLQKVIELALANNRDLRVAALTIEKTRAQYRIQRADLLPTINGTAGATIQRTPADLSSTG 132 Query: 117 TGQLD---------SDWKIDLFGQRRHIESSLANLDSAYAQV-DIAKLNVISKLIPSYID 166 ++ S++++DLFG+ + ++ A Q + ++++++++ +++ Sbjct: 133 RARVSEQYNVGLGVSNYELDLFGRVQSLKDQALEQYLATEQARNSVQISLVAEVANAWLT 192 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +ER+ I L ++ +L ++ G TS L L + + + + DI Sbjct: 193 LAADRERLKITRDTLASQQEYYQLIKHRYDAGITSALDLYQAQTAVDAARVDIARYTTLV 252 Query: 227 RMNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + + L+G P A + L Q +++G+P++++ RPDI E +L Sbjct: 253 AQDENALGLLVGRPVAADLLPTELGSLTAVQE-----LSVGLPSEVLLKRPDILAAEHRL 307 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +P + L+ G+ + + F + W+F P++ +P+FD G+ + Sbjct: 308 KGANANIGAARAAFFPRIGLSAGFGTASAKLTDLFQPGSVAWNFVPQISVPLFDTGRNIA 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + +++ +++ + A +EV + L + Q + +S LS Sbjct: 368 GLDVSKADRDIAVAQYEKAIQTAFREVADTLAQRGTINDQLAAQQSLTDATAESHRLSQA 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G S L ++ +RA + +L + + Y +G G Sbjct: 428 RYDRGVDSYLTVIVAQRALYAAQQNLITVRLARLANQATAYKVLGGG 474 >gi|17546013|ref|NP_519415.1| outer membrane CHANEL lipoprotein [Ralstonia solanacearum GMI1000] gi|17428308|emb|CAD14996.1| putative outer membrane chanel lipoprotein [Ralstonia solanacearum GMI1000] Length = 489 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/438 (21%), Positives = 196/438 (44%), Gaps = 29/438 (6%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 LP+Q S+N W + FND L LV A+ + + A R+ A++ + Sbjct: 38 LPSQGGQWPSQN--------WVDQFNDPQLRALVDEAIHDSPNLQVAFARVRASRAMADA 89 Query: 92 VRADLFPS---SYASISHRF--------IP---NLKTNSTGQLDSDWKIDLFGQRRH-IE 136 R DL+PS RF P N T S QL + +D +G+ R +E Sbjct: 90 ARGDLYPSVGLDAEMTRQRFSSYDLFEGTPLGGNWVTESKIQLGVSYDLDFWGKNRAALE 149 Query: 137 SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 S+L++ + A+ ++L + + + +Y+ + +A + + ++ + LS + Sbjct: 150 SALSDDKAMEAESQASRLMLSTSVARTYVKLAALYAQRDVAERTIAQRRELVSLSGQRLR 209 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G +++ + A I + ++++ +++ + + ++ LLG L + + + Q Sbjct: 210 AGLDTQVETTQARANIAAAQTELEQVDEQIALARNQLAALLGKGPDRGLA-IARPTLLAQ 268 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--- 313 P +P ++ I DLI RPD+ ++ + I +AK+ P +SL + L Sbjct: 269 PTPKLPDHLSI--DLIGRRPDLVAARWRVEATAKDIDVAKAQFLPDISLTAFLGLASIAP 326 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 +N G GP L LPIF+ GK+++N+R + ++ +T+ A+ + + + Sbjct: 327 ENLLLGNARQLGIGPALRLPIFEGGKLRANLRGKYAGYDAAVASYNQTLTEALHDTADQI 386 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 TS++ + + A+ +++ SL+ Y G + L +L+ E + ++ + Sbjct: 387 TSLHSIDTQIDIQRTALAEAERAYSLARTRYGAGLGTQLTVLNAESTVLQQRRLAALLQA 446 Query: 434 QLAKSYVDLYIAIGSGYN 451 + + + L A+G GY Sbjct: 447 RRLDAQMALIKALGGGYT 464 >gi|329113672|ref|ZP_08242447.1| Putative outer membrane lipoprotein SilC [Acetobacter pomorum DM001] gi|326696935|gb|EGE48601.1| Putative outer membrane lipoprotein SilC [Acetobacter pomorum DM001] Length = 483 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 208/475 (43%), Gaps = 36/475 (7%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 R + S F+ L C+ P +P QF+ ++ D WW ++ D L++ Sbjct: 11 RLLLSTFLCAGLVACSPFHTTLPPSHVAIPAQFNAA-PQDAQPTDLTNWWTAWQDPLLDQ 69 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---------HRFIPNLKT 114 LV+ AL N I A ER+ ++ ++ L+P+ A+ H P +K Sbjct: 70 LVQNALAANPEIRMAQERVQESRAYTQMAKSALYPTIGATGGMMGGGVDWRHPVPPLMKM 129 Query: 115 N--------STGQLDS---DWKIDLFGQRRHIESSLANLDSAYAQV-DIAKLNVISKLIP 162 + G L W+ D++G+ R + + ++ A A V + + + + Sbjct: 130 ADPDIQDPATDGHLAGITMAWEPDIWGRNRARKRAAQHMALAAADVLHGTHMAIAADVAA 189 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ AR ++RI + Q ++ + + +F G T++ L + A+++ +++ P L Sbjct: 190 NYLTARGLQQRIVLLDQSARTLQELVRYATARFDAGQTTRADLETITAQVQQVQAQRPLL 249 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IPINIGIPADLIRNRPDIR 279 + H ++ L G P ++ + P Y P +P+ ++ RPD+ Sbjct: 250 VAALDACRHRLAILSGLPP-------EQAPDITAPAQYRVPAPPATELPSTVLDRRPDVL 302 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSF-GPKLYLPIFD 336 Q+ + ++ ++ K+DL P L G + PG + YLP+F Sbjct: 303 LQKNIVQANLERLISTKTDLLPRFGLEFFGGDGRLRFDGIPGVSGSGGLMAVNAYLPLFT 362 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+I++ IR ++S ++ ++ +TVL A+ EVE+A S + + + L V + Sbjct: 363 AGRIQAKIRASDSQLKQAVASYDQTVLTALAEVEDAYESRSSADQNIASLSKEVSSLTLA 422 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y G++++ DIL + +L A+ + A S V L A+G G++ Sbjct: 423 TTQAQGLYEGGQFTMQDILTTRIKKISAQDELVSAQTRQALSTVRLARALGGGWD 477 >gi|73540920|ref|YP_295440.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72118333|gb|AAZ60596.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 487 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 100/476 (21%), Positives = 202/476 (42%), Gaps = 37/476 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------------LKWW 53 A+F+ +V L GC VGP++ P P + G++ + D WW Sbjct: 13 AVFA--VVALCGCAVGPDFVPPEEPAISQYVRGGDASSTPAGDGRAQHFAAGAMVPADWW 70 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPN 111 F L++ V AL N ++ A + A S +P ++ A S + Sbjct: 71 RMFGSAELDQAVDGALAANPSLQVAEANLRQADAVARSGAGVFYPQVAAQAQASRQTTTP 130 Query: 112 LKTNSTG--------QLDS--DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 ++ S+ L + + +DLFG RR +E+ A + V A L + L Sbjct: 131 VRLGSSAPPGIFNVFTLGATISYALDLFGGNRRAVEALAAQAEVQRYAVGAAWLTLTGTL 190 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I + +I+ ++ + ++ ++++ + + G T+ S + L +++ S+E+ +P Sbjct: 191 VNTAIARAGYAAQIAATDTLVKIVREQVDVTRAQVSAGMTTHASELSLLSQLGSLEATLP 250 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L + H +TL G +E + + P+ + +P++L+R+RPD+ Sbjct: 251 PLAQRMDQADHLGATLAGRFPSEAGPLVLSLDSLVLPSDLPRM---LPSELVRHRPDVLA 307 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLYLPIF 335 + +L + A++G+A + + P++ L+ S + PG W + P+F Sbjct: 308 AQAELHVAAAQVGVATAAMLPNIVLSASYG--REGVQPGSLLGAGGGVWGIAAAAFAPVF 365 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G + R A++ + +++ VL A +V +AL ++ D V A + + Sbjct: 366 QGGTLYFRRRAAQAQFEAAQANYRQVVLAAFAQVADALRALEHDALTVDAQDRARQAAGE 425 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 M+ NYR G L +L + + A Q + L++A+G+G+ Sbjct: 426 LMTEVQANYRAGAAGYLQLLVANAQYQQATIGYIQAHTQRLQDTAALFLALGAGWE 481 >gi|325275380|ref|ZP_08141325.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas sp. TJI-51] gi|324099486|gb|EGB97387.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas sp. TJI-51] Length = 478 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 104/469 (22%), Positives = 212/469 (45%), Gaps = 43/469 (9%) Query: 15 LAGCTVGPEYTKPHMPL---LPTQFSIG--NSKNLINIDTLKWWESF-NDTSLNKLVKIA 68 LAGC++ P Y P P+ P G + +N + D W +F +D+ L +L+++A Sbjct: 8 LAGCSLEPAYETPASPMDTGWPDSVEAGCCDPRNAFDPD----WRAFVSDSRLRRLIELA 63 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSD- 123 L N + QA + A+ A L+PS +YA + +P L+ G + Sbjct: 64 LVDNRDLQQAAASVAQARAGYQGAAAALYPSLGVDTYAGRAK--LPALEQTPGGGSSAGS 121 Query: 124 -------------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 +++D FG+ R ++ A + A A++ +I ++ +++ + Sbjct: 122 VANTFQATVGFTAYELDFFGRARSQAHAAEARFHATLADYQAARMALIGEVAGTWLTLKA 181 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A + + + +L F G+T+++ + + +A + + T N Sbjct: 182 NQSLLGLAERTFESQQHFGQLLRSSFNLGSTARIDVHQADAITNTAAVQVSTYRMQVAQN 241 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ + L+G L + Q +P G+P+ L+ RPDIR + +L + Sbjct: 242 LNALRVLVGQTVPAGL-LPEGQLGAQMATADVPA--GVPSSLLERRPDIRAAQAQLRAAN 298 Query: 290 AKIGIAKSDLYPSLSLNGSIA-LTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A+IG A++ +PS SL G++ L+ D S W+ L + D G+ ++ + Sbjct: 299 AEIGSARAAYFPSFSLTGALGSLSGDFSRLLTSPAQFWNLAALGSLTLLDAGQRRAGVDA 358 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + ++ +++TVLNA +E NAL + E V + VE ++++ S + + Sbjct: 359 TWAQYDQRVAAYEQTVLNAFREAANALNARQEMLPQVAAQRQLVEDYEQAYRQSRLRFEA 418 Query: 407 GRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S +D +R+ + ++L +A+ + V+L+ A+G G++P Sbjct: 419 GLDSYFSTMDAQRSLFGAQQRWLELELARE---INQVNLFKALGGGWSP 464 >gi|294664429|ref|ZP_06729784.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605798|gb|EFF49094.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 494 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 109/468 (23%), Positives = 197/468 (42%), Gaps = 34/468 (7%) Query: 13 VLLAGCTVGPEYTKPHMP--------LLPTQFSI-----GNSKNLINIDTL--KWWESFN 57 V LA C VGP++ +P P LP + G ++ L WW +F Sbjct: 15 VSLAACAVGPDFQRPAAPTADRYTANALPATTAAADVAHGGAQEFEPGQELPAAWWHAFG 74 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIP 110 LN +V+ AL+ N + A + A++ + + R P +S S P Sbjct: 75 SPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGVWLPQADLHVDASRQRDSVVPAP 134 Query: 111 NLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + ++ T QL + +DLFG RR +E++ A + Q D A L++ + ++ + Sbjct: 135 DAGIDTPYALRTAQLSVSYTLDLFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAA 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I + +++ A + + ++ L+ + GA ++ + ++ +P LEK Sbjct: 195 IGEAAVRAQLAAARAQVAIAEQLCTLTERQQALGALGTAQVLAQRTALAQAQAAVPALEK 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + +LG + Q +P+++ P+ L+ RPDIR E + Sbjct: 255 QLEQQ-RTLLAILGGQLPGDAAGAAFTLDTLQLPAQLPLSL--PSRLVDRRPDIRAAEAQ 311 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A IG+A + PS++L+ + + F NT WS L P+F G + Sbjct: 312 AHAASALIGVAAAARLPSITLSAAGGGSASSVGRMFAAGNTQWSVAGSLLQPLFHGGALA 371 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R AE+ + ++ VLNA EV NALT++ D + + A L +++++L Sbjct: 372 HQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQNLRACADAQALAERTLALVQ 431 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + D+L ++A + A+ V LY A+G G Sbjct: 432 RQQAVGAVGMADLLQAQQAYQGTQAATVQAQAARYTDTVALYQALGGG 479 >gi|104783699|ref|YP_610197.1| RND family multidrug efflux outer membrane protein [Pseudomonas entomophila L48] gi|95112686|emb|CAK17414.1| putative multidrug efflux outer membrane protein, RND family [Pseudomonas entomophila L48] Length = 479 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/429 (21%), Positives = 196/429 (45%), Gaps = 41/429 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERI---NAAKENILSVRA---DLF------- 97 +WW+ + D L+ LV A Q N + + R NA +E + RA D F Sbjct: 59 QWWQRYGDAQLDGLVAKAWQNNPGLQEVRARADKANAYQEYYGADRAPQVDAFGDVKRSR 118 Query: 98 ---PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAK 153 YA +R++ S G + D+ +DL+G +R E+S++ +A +V A+ Sbjct: 119 LSRSEDYAGQGNRYV---TVRSLG-VTFDYDLDLWGGKRSAWEASVSQARAAEVEVQSAR 174 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE-------LSHLKFTQGATSKLSLV 206 L + + ++ +Y +++ A ++DL +++++ L+ ++ G +K L Sbjct: 175 LLLAANVVKAY-------NQLTYAWDVVDLSERDLKRLRNLQSLTGDRYHNGLDNKSQLQ 227 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 +++ + E+ + ++ +S LLG + H + + +P N+ Sbjct: 228 RVDGLVARAEASLLGARSDVQVARLQLSALLG-TGVDGAHDIARPKPLRSDEAALPENL- 285 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTH 323 PA+L+ RPDI ++ + K+ YP+++L G A++ D+ + Sbjct: 286 -PAELLGRRPDIVAARWRVEAQTQTVASVKTRFYPNINLRAAGGIHAMSGDSFNDSVSRF 344 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+ P + LP+FD G+++S ++++ + + T+ A+ +V ++T + + + Sbjct: 345 WNIAPTVTLPLFDAGRLRSELKQSNADLDLAIAGYNSTLNTALHQVATSVTELQAVNRQI 404 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + A + + S L++ + G + LD L+IE + E+ L++ + S V L Sbjct: 405 GLQRTARDTAQSSFDLAVERFEVGENNFLDSLNIEEQLIEDEMRLALLSSKQIDSAVSLV 464 Query: 444 IAIGSGYNP 452 A+G GY P Sbjct: 465 TALGGGYEP 473 >gi|194291394|ref|YP_002007301.1| outer membrane drug efflux lipoprotein [Cupriavidus taiwanensis LMG 19424] gi|193225298|emb|CAQ71240.1| outer membrane DRUG EFFLUX LIPOPROTEIN; similar to P.aeruginosa oprM [Cupriavidus taiwanensis LMG 19424] Length = 620 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 97/479 (20%), Positives = 205/479 (42%), Gaps = 47/479 (9%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNS--------------------KNLINIDTLKWWESFN 57 CT+ P+Y +P P+ P+ + G + + L W + F Sbjct: 31 CTLEPQYQRPEAPI-PSAWPDGAAYRTSQAKPANGAAQPGQPAQPPGPSAADLGWRDVFV 89 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI----- 109 D L +L+++AL N + AT I+ A+ RA FP+ S +S R Sbjct: 90 DPQLRQLIELALANNRDLRMATLAIDEARALYQIQRAAQFPTVEGSAGVVSQRLPQRLRA 149 Query: 110 ----PNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSY 164 P + T + G + +++D FG+ R ++ ++L + A++++++++ +Y Sbjct: 150 AGQSPQITTYNAGIGLTAFELDFFGRVRSLKHAALEEYMATEEARRSAQISLVAEVANAY 209 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R + + ++ L + E+ GA ++L + + ++++ + + + Sbjct: 210 LTLRADRALLQLSQDTLKTQQDAAEMVRRGHQVGAMAQLDQHRAQTQVQTAQVGVEQYTR 269 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI---------GIPADLIRNR 275 + + ++ L+G P + + N P++ G+P+ ++ R Sbjct: 270 QVAQDENALALLIGGPLPKSVLDAGAAPANPNAPAPDPLDARVLMREFPEGLPSSVLVRR 329 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYL 332 PDI E +L + A IG A++ +P +SL G++ + +S G W F P+L + Sbjct: 330 PDILDAEHRLKAANANIGAARAAFFPRISLTGALGVAS-SSLAGLFSGGMAWVFAPQLTV 388 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD G+ ++ + A +++T+ A +EV +++ + ++ V + V Sbjct: 389 PIFDAGRNRAGLDAANVRKDINVANYEKTIQTAFREVADSMAARATYERQVQAQEALVRE 448 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ LS + ++ G + D +R + L K S V LY A+G G+ Sbjct: 449 GSETRRLSEMRFKNGVDDYFGVFDAQRQLYAAQQALITYKLAGLTSRVSLYKALGGGWR 507 >gi|224824196|ref|ZP_03697304.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224603615|gb|EEG09790.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 471 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 112/469 (23%), Positives = 213/469 (45%), Gaps = 30/469 (6%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDT 59 +LR L IVL LA C + P + LP S+G S N + +D WW+ + D Sbjct: 9 LLRRAMPLAIVLALAACA-----SVPDLGPLPQPKSLGVSPNAGQVQLDA-SWWQHYGDA 62 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISH----------- 106 LN+L+ AL+ + A R+ A A PS AS+S Sbjct: 63 QLNQLIDEALRNAPDLAAADARVRKAIGAAQQAGAATLPSVGVNASLSRMKQSYNNGVPA 122 Query: 107 RFIPNLKTNST-GQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 F+P NS LD ++ID +G+ R + ++ +A A A+L + + + +Y Sbjct: 123 AFVPQGLNNSVRATLDLSYEIDFWGKNRSALAAATNEQAAAEADAAQARLTLSTAIAAAY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + H + A Q L++ ++ +L + QG + ++ + ++ S ++++ +E+ Sbjct: 183 AELAHLYAQRDAAQQALEIRTQSAQLIKERQQQGLETLGTVRQADSRSASAKAELLAIEE 242 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 S + H ++ L+G E +Q+ + N N+ IP + ADL+ RPD+ + Sbjct: 243 SIALQGHQLAALMGAE-PERGDRIQRPAINLAQNITIPAQL--HADLLGRRPDLTAARLR 299 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + +I ++++ YP+L+L+ G+ +L + FGP + LPIF G+++ Sbjct: 300 AEAAAKRIDQSRAEFYPNLNLSAYVGAQSLGLGLFTKAGSGIAGFGPAISLPIFRGGQLQ 359 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R + E + +T+ A+++V +AL+S ++ Q ++ + ++ ++ Sbjct: 360 GQYRVTRAQYDEAVANYDQTLNRALQDVADALSSQAALDGRLSAQQESLAAAEDALRIAR 419 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G + LD+L E + LS + + V L A+G GY Sbjct: 420 NRYQGGLATYLDVLTAEDSVVASRRSLSDLQTRRLSLDVALIRALGGGY 468 >gi|134278052|ref|ZP_01764767.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|134251702|gb|EBA51781.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] Length = 631 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 179/388 (46%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|53719200|ref|YP_108186.1| putative outer membrane lipoprotein [Burkholderia pseudomallei K96243] gi|52209614|emb|CAH35567.1| putative outer membrane lipoprotein [Burkholderia pseudomallei K96243] Length = 634 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 179/388 (46%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|190574715|ref|YP_001972560.1| putative outer membrane multidrug efflux protein [Stenotrophomonas maltophilia K279a] gi|190012637|emb|CAQ46265.1| putative outer membrane multidrug efflux protein [Stenotrophomonas maltophilia K279a] Length = 478 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 104/474 (21%), Positives = 201/474 (42%), Gaps = 33/474 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------K 51 + +R ++ + C GP+Y H+P S ++ ++ + Sbjct: 3 VRTVRGGLLALLLPMTACVSGPDY---HLPASAVAASPRAARAFVSGQEASFSHDAPPDR 59 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-P 110 WW+ + D L+ V+ AL N + A + A ++ RA S + Sbjct: 60 WWQLYGDPQLDAYVRDALAANTDLRAADANLRRASATVMEYRARGAVQGDVDASGTLVHA 119 Query: 111 NLKTNSTGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 T ++ S + +DL G RR IE++ A+ ++ A D ++ V + + Sbjct: 120 GGYTQASAAPQSYALGLHLSYPLDLAGGIRRGIEAANADTEAIAAARDQVRVVVAAAVTR 179 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ ++ Q+L + + +E + G + + + A + + IP L Sbjct: 180 AYLQVCTSNHTLAATRQVLAIQRATLEATRRLAAGGRGTDFDVSRAGAAVNRSAAAIPHL 239 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRY 280 + ++ ++ L+G PA Y ++ QP L + IG L++ RPD+R Sbjct: 240 LAERQASLFELAALMGKVPA----DYPREAEGCPQPPELQQALPIGDGWQLLQRRPDVRA 295 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALT----HDNSFPGYNTHWSFGPKLYLPIFD 336 E+ LA + A IG+ + LYP ++L S + H S G+ S GP L D Sbjct: 296 AERSLAAATAMIGVETASLYPQITLGASSGVAGTPAHLLSADGFGA--SIGPVLSWHWPD 353 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + K+ I A ++A ++ VL A+++ E AL++ ++ + L HA ++ Sbjct: 354 RRVAKARIAAAGANADTALASFDGVVLQALRQTETALSACTQELERERSLAHARRDASRA 413 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR GR LD+L + A E L+ ++ + +DL++++G G+ Sbjct: 414 TEQAQHLYRFGRIDFLDVLSAQAELADAESALAASRAERIDRQMDLFVSLGGGW 467 >gi|160897756|ref|YP_001563338.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160363340|gb|ABX34953.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 461 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 114/477 (23%), Positives = 200/477 (41%), Gaps = 46/477 (9%) Query: 1 MNILRAIFSLFIVLLAGCTV--GPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWES 55 M++L+ V LAGC P Y P + LP QF + + T WW Sbjct: 1 MHMLKTSALACAVALAGCGAITRPPYEAPQV-ALPAQFEHAQASSPAATPTPMTDAWWHG 59 Query: 56 FNDTSLNKLVKIALQQNLTILQATERIN-AAKENILSVRADLFP---SSYASISHRFIPN 111 F D L+ + +AL +N + A R+ AA + L+ A L P S + + R + Sbjct: 60 FGDPRLDAWIDLALARNPDMATAGIRVRRAALQAQLAGHA-LLPQPSGSAGTGASRPLSG 118 Query: 112 LK----TNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY--AQVDIAKLNVISKLIPSYI 165 + N++ L W++DLF + A D+A AQ + N ++ + + Sbjct: 119 SQRSTLENASATLGVAWELDLF------DRLGAQRDAAVFEAQASVQDRNAVALSLTTTT 172 Query: 166 DARHFK-----ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE---AEIKSIES 217 + +++ ER+ ++ Q L+ ++ I+L ++ GA S L L + AE +++ S Sbjct: 173 ASLYWQLALANERLDMSRQSLEYVRRTIDLVQAQYRSGAVSGLELREARQALAEQQALLS 232 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIP-INIGIPADLIRN 274 R + E L + Q P +P + G+PADL+ Sbjct: 233 QYTQARAELRQAL-----------AELLQGAEPPGGEPQALPVADLPAVQPGLPADLLGR 281 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLP 333 RPD+R E +L ++A + YP LSL GS+ + N + G L LP Sbjct: 282 RPDLRAAELRLRGALAGSDATAASYYPRLSLTGSLGTSSSTLLDVLANPVAALGANLALP 341 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + +++ N A S +E + +++T+ A+ E E +L++ E Q A + Sbjct: 342 FLNVREMRLNTAIARSQYEEAVVNFRKTLYAALAETEKSLSARTELALQEEAQQRATQES 401 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L YR G+ L LD + ++ LS ++ + L+ A+G G+ Sbjct: 402 VEITRLYEARYRAGQVPLRTWLDAQERRRAAQLALSALHLARLQNQLTLHKALGGGW 458 >gi|53802997|ref|YP_115211.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] gi|53756758|gb|AAU91049.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] Length = 482 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 196/428 (45%), Gaps = 36/428 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW F+D L+ L+ AL N + A R+ A ++ + L+PS Sbjct: 53 QWWRKFDDPVLDDLIDRALAANPDLRSAQARVREAAATVVVAESALYPSLDFFGSGGREK 112 Query: 100 -------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ--VD 150 ++ I TG L + W++D+FGQR H+E+ A + + + Sbjct: 113 RIDRIIAVPGKQGYQLITPTADMVTGGLSARWELDIFGQR-HLEAEAAAAQALGVEETLH 171 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ +++++ +Y++ R + + ++ L++ ++ ++ + G + ++ EA Sbjct: 172 AAQVGLLAQVATNYLELRGVQRQTALFEDNLEVQRERLKTLKAFYRAGLAEEAAVAGQEA 231 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--- 267 ++S E+ +P L ++ + +S L G P +Q + +P +P + I Sbjct: 232 LLQSAEAALPALNETAIRLIQRLSVLTGQPP----QTLQARLAEPRP---LPASTPIIPK 284 Query: 268 --PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL--SLNGSIALTHDNSFPGYN-T 322 P+ L+ RPD+R + ++ + A +G A++DL P L S +G FP + + Sbjct: 285 LLPSSLLAQRPDLRQAQAEVIAAAAGLGAARADLLPKLVLSASGGFGALAVGGFPSLSES 344 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 ++ G L PIF+ G+I++ I A++ + +++T L A+++VENA + + Sbjct: 345 VYALGAGLTAPIFNAGRIRAQIAAADARLDQVAANYEKTFLQALEDVENAFLAHRTANQR 404 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 L A + + + YR+G + L +LD + + V + A+ + V L Sbjct: 405 CLHLADAEAAAEHARHSTEALYRRGAANYLAVLDSKASKLSVLGEAVKARTTALVALVSL 464 Query: 443 YIAIGSGY 450 Y A G G+ Sbjct: 465 YRAFGGGW 472 >gi|54296296|ref|YP_122665.1| hypothetical protein lpp0325 [Legionella pneumophila str. Paris] gi|53750081|emb|CAH11473.1| hypothetical protein lpp0325 [Legionella pneumophila str. Paris] Length = 448 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 211/463 (45%), Gaps = 39/463 (8%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI ++ + L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSI-QTEQAAYLPDLHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLQQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLVAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ HNI Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSHIQRIEAQIKVVQ-------HNIVV--- 232 Query: 239 YPATEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LH++ ++ N N +P N +PA ++R RPDI E L + Sbjct: 233 --TKNALHFLFNENPGDVETKTLFENIDSNQLVPGN--LPASVLRVRPDIHEAEALLKAA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A +G ++L P ++L + + + + GP + LP+F + + + Sbjct: 289 HADVGAITANLLPGINLGAYLGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVDVS 342 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR G Sbjct: 343 KARYKAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALNDEKQQCHLAEVRYRHG 402 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+++ + + ++ ++ K + S V LY +G GY Sbjct: 403 IDDYLNLIKCQILLDEFKLVINQNKLEKLLSIVTLYQDLGGGY 445 >gi|148358466|ref|YP_001249673.1| outer membrane channel protein [Legionella pneumophila str. Corby] gi|148280239|gb|ABQ54327.1| outer membrane channel protein [Legionella pneumophila str. Corby] Length = 448 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 211/463 (45%), Gaps = 39/463 (8%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI ++ + L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSI-QTEQAAYLPDLHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLRQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLVAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ HNI Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSHIQRIEAQIKVVQ-------HNIVV--- 232 Query: 239 YPATEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LH++ ++ N N +P N +PA ++R RPDI E L + Sbjct: 233 --TKNALHFLFNENPGDVETKTLFENIDSNQLVPGN--LPASVLRVRPDIHEAEALLKAA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A +G ++L P ++L + + + + GP + LP+F + + + Sbjct: 289 HADVGAIAANLLPGINLGAYLGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVDVS 342 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR G Sbjct: 343 KARYKAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALSDEKQQCHLAEVRYRHG 402 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+++ + + ++ ++ K + S V LY +G GY Sbjct: 403 IDDYLNLIKCQILLDEFKLVINQNKLEKLLSIVALYQDLGGGY 445 >gi|296105814|ref|YP_003617514.1| outer membrane channel protein [Legionella pneumophila 2300/99 Alcoy] gi|295647715|gb|ADG23562.1| outer membrane channel protein [Legionella pneumophila 2300/99 Alcoy] Length = 448 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 110/459 (23%), Positives = 212/459 (46%), Gaps = 31/459 (6%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI ++ + L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSI-QTEQAAYLPDLHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLRQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLVAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL- 237 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ + + + + L Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSHIQRIEAQIKVVQHNIVVTKNALHFLFN 242 Query: 238 ---GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G T+ L N N +P N +PA ++R RPDI E L + A +G Sbjct: 243 ENPGDVETKILF------ENIDSNQLVPGN--LPASVLRVRPDIHEAEALLKAAHADVGA 294 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPG---YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 ++L P ++L L ++ G + GP + LP+F + + +++ Sbjct: 295 IAANLLPGINLGAY--LGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVDVSKARY 346 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR G Sbjct: 347 KAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALSDEKQQCHLAEVRYRHGIDDY 406 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+++ + + ++ ++ K + S V LY +G GY Sbjct: 407 LNLIKCQILLDEFKLVINQNKLEKLLSIVALYQDLGGGY 445 >gi|94310675|ref|YP_583885.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93354527|gb|ABF08616.1| outer membrane efflux protein, putative copper/silver efflux system [Cupriavidus metallidurans CH34] Length = 497 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/465 (20%), Positives = 205/465 (44%), Gaps = 37/465 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLIN--------------IDTLKWWESFNDTSLNK 63 C++ P Y +P P+ P + G + N +L W + F D L Sbjct: 27 CSLEPTYQRPESPV-PQAYPTGPAYESANKGPAGQARPDQATPAASLGWEDFFTDPRLRT 85 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPNLKTNSTGQL 120 L+ +AL N + AT I+ A+ RA FP+ A+ S R +L+ + Sbjct: 86 LIGLALANNRDLRIATLSIDQARAQYRIQRAAQFPAINANAGFASTRLNSDLRAPGQDAV 145 Query: 121 DSDW---------KIDLFGQRRHIESSLANLDSAYAQVD-IAKLNVISKLIPSYIDARHF 170 + W ++D+FG+ R ++ A +V A++++++++ +Y+ + Sbjct: 146 INSWTAGVGFNAFELDVFGRVRSLKHQALEQYLAIEEVRRSAQISLVAEVASAYLTWQAD 205 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + ++ + L + + + + G +++ + + + ++++ + D+ + + Sbjct: 206 QELLRLSKETLKVQQDAALMISRSKSAGGMAEIDMHRGQTQVQTAQVDVEQFTRQVAQDE 265 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + ++ L+G L Q +NN + + G+P+ L+ RPDI E +L + A Sbjct: 266 NALALLIGGQLPADLPPPQPFANN---SYVAELPAGVPSTLMEQRPDIMAAEHQLKGANA 322 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +P +SL ++ + + F G W+F P++ LPIF+ G ++ + A Sbjct: 323 NIGAARAAFFPQISLTATVGVASTALASLFTG-GMAWAFAPQITLPIFNAGANQARLDIA 381 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++T+ A +EV + L + D++ V + E+ ++ L+ I ++ Sbjct: 382 TVQKDINVAAYEKTIQGAFREVADGLAARGTYDRQTVAQEALTKEVS-ETKRLAEIRFKN 440 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + D +R + + + S LY A+G G++ Sbjct: 441 GVDDYFPVFDAQRQLYDAQKKMVTIELARLTSRASLYKALGGGWS 485 >gi|254189001|ref|ZP_04895512.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|254197429|ref|ZP_04903851.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|254297480|ref|ZP_04964933.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|157807634|gb|EDO84804.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|157936680|gb|EDO92350.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|169654170|gb|EDS86863.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] Length = 634 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/383 (22%), Positives = 178/383 (46%), Gaps = 35/383 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 244 FLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +N +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P Sbjct: 283 ------APANLALADLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFP 336 Query: 302 SLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 337 QLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVD 394 Query: 357 TWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 395 QYKQTVLAAFQDVADKLAALEND 417 >gi|226197432|ref|ZP_03793009.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|225930811|gb|EEH26821.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] Length = 565 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 169/353 (47%), Gaps = 38/353 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + ++AA+E + + + + L P+ A + R Sbjct: 9 WWKRYRSPALDALVDEGLRNSPTLAAAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRER 68 Query: 108 FI--PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVIS 158 + P + GQL + + +DLFG R +L+ +D Q++ A+ + + Sbjct: 69 ALGMPAFGPQTVLYNVFAGQLQASYTLDLFGAARFANRALSKRVDVNAYQLESARRALAA 128 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E+++ +++ L ++ + + GA S+ ++ ++E+ Sbjct: 129 NIVTAAVTSAALAEQVATTERLVALAREQASDAAARHRLGAASRTDMLNTRQSAAALEAS 188 Query: 219 IPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 +P L + + H ++ LLG PA L +L++P + + +P+ L Sbjct: 189 LPALRQQAQSARHALAVLLGRTPDAAPANLALA-----------DLHLPQDVPVVVPSTL 237 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFP----GYNTHWSF 326 ++ RPDIR E L + A++G+A + ++P LSL+ S+ H +P G WS Sbjct: 238 LQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSV 295 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L P+F G + + R A +S +++TVL A ++V + L ++ D Sbjct: 296 GASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADKLAALEND 348 >gi|78066506|ref|YP_369275.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77967251|gb|ABB08631.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 521 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/421 (21%), Positives = 190/421 (45%), Gaps = 44/421 (10%) Query: 1 MNI-LRAIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLK------ 51 MN+ +A+ +L + LAG G + P P +P+ G + + + + Sbjct: 5 MNLKTQAVRALAVASLAGPLAGCSWFAPSGEPPAMPSPAHYGTTPQVQQTVSAQGVAQQF 64 Query: 52 ---------WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSY 101 WW+ + +LN LV L+ + T+ A+ ++AA+E + + + + PS Sbjct: 65 EVGAQPVPDWWKQYRSDALNALVDEGLRNSPTLSAASHSLDAAREQLRGQIGSSMLPSID 124 Query: 102 A---SISHRF----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYA 147 A + R IP L + GQL + + IDLFG R +LA +D + Sbjct: 125 AGGQATRQRALGVPIPALGAPTLLYDTFVGQLQASYTIDLFGASRFANRALARRVDVSAF 184 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q++ A+ + + ++ + I +I+ +++ L + ++ G+ S+ + Sbjct: 185 QLESARRALAANIVTASITVSVLNAQINTTERLVALANDQAHDAERRYALGSASRSDALN 244 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INI 265 + + +P L + H ++ L+G Q ++ +L++P + + Sbjct: 245 ARQSADTFAASLPALRQQRDSARHALAVLVGRTPD------QPPADLTLADLHLPEQVPV 298 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNT 322 +P+DL+++RPDI+ + L + A++G+A + ++P LSL+ G + G + Sbjct: 299 VVPSDLLQSRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMGKGGFSWPTMLSGAGS 358 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ G L PIF G + + R A+++ + +++ VL A + V ++L ++ D + Sbjct: 359 IWNVGASLSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEA 418 Query: 383 V 383 + Sbjct: 419 L 419 >gi|126452102|ref|YP_001066428.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|242314259|ref|ZP_04813275.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|126225744|gb|ABN89284.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|242137498|gb|EES23900.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 634 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 179/388 (46%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|307730426|ref|YP_003907650.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307584961|gb|ADN58359.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 576 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 106/475 (22%), Positives = 211/475 (44%), Gaps = 38/475 (8%) Query: 6 AIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ ++ + + AGC + P+ ++ L +I + WW ++ D L Sbjct: 13 AVLTILLTM-AGCASTGGIAPQASRTDAASLDAGNAIRAAAADAQWPAADWWHTYRDPQL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL------ 112 + ++ AL N ++ A R+ A R+ L P A +S ++ NL Sbjct: 72 DAWIEAALAGNPSLAAAQARVREAMSMAGVARSALAPQVNADLSIKRQKWADNLYYGPGP 131 Query: 113 -----KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N+TG L + +DL+G+ R+ E +L ++ A A+L + + ++ +YI+ Sbjct: 132 LAGEQSWNNTGTLALSYHLDLWGKDRNAAERALDAAHASAADARAAQLELQANVVRTYIE 191 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + IA L+ ++ +L+H + G ++L + + E + E I LE+ Sbjct: 192 MSLNYALLDIARATLEQQQQIADLAHRRLKGGIGTQLEVSQAETPLPEYERQIDALEEKI 251 Query: 227 RMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ L G A + L Q + +PA+LI +RPD+ Sbjct: 252 ALGRNQLAALAGKGPGAGDSL-----QRPALSLAAPAGLPAALPAELIGHRPDVVAARWS 306 Query: 285 LADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 +A I +AK+ YP + S+ G A+ F +H WS GP L LPIFD G+ Sbjct: 307 VAAQARGIDVAKAGFYPDIDLLASIGGYAAMGPLFQFLKNPSHSWSAGPALSLPIFDGGR 366 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA---VELHKKS 396 +++ + A +S E + +T++ A+K++ + + + + + T+ Q A V +K+ Sbjct: 367 LRAQLGAATASYDEAVQQYNQTIVGALKDISDQVIRM---RSLTTQAQDAERSVAAARKN 423 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LS YR+G +++L + + + ++ + + ++ L A+G G + Sbjct: 424 YELSREGYRRGLTDYVNVLIAQNQLLRAQEGVAKVQAERLGAHASLVTALGGGLD 478 >gi|330885638|gb|EGH19787.1| outer membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 472 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 115/471 (24%), Positives = 209/471 (44%), Gaps = 42/471 (8%) Query: 15 LAGC--------TVGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 LAGC + P+Y +P P+ LP S + + D + W F D L Sbjct: 10 LAGCHGAAPGCVNLAPDYQRPEAPVSSQWLPATASQPVASGSVPTD-IDWQNFFTDKRLI 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG-- 118 +L +AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 69 RLQTLALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKS 127 Query: 119 --------QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 QL S +++D+FG Q +E LA ++ + ++++I+++ + Sbjct: 128 SISHEYSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGW 183 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + +A L +++ +L+ G +S L + + + ++S D+ + Sbjct: 184 LTLAADNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKS 243 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + + L+G E L + Q + + +P+ L++ RPD+ E Sbjct: 244 QILQDRNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHS 300 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + IG A++ +PS++L GS + + F + WSF P + +PIFD G + Sbjct: 301 LKAANIDIGAARAAFFPSITLTANAGSASTSLSGLFTSGSGSWSFAPSISVPIFDGGSNR 360 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ Sbjct: 361 ATLDSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELAD 420 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 421 ALYRGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 471 >gi|53725405|ref|YP_102677.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|67642701|ref|ZP_00441454.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|166998762|ref|ZP_02264616.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] gi|254178487|ref|ZP_04885142.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254199616|ref|ZP_04905982.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|254205934|ref|ZP_04912286.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|254358667|ref|ZP_04974940.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|52428828|gb|AAU49421.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|147749212|gb|EDK56286.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|147753377|gb|EDK60442.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|148027794|gb|EDK85815.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|160699526|gb|EDP89496.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|238523891|gb|EEP87327.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|243065116|gb|EES47302.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] Length = 634 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 169/353 (47%), Gaps = 38/353 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + ++AA+E + + + + L P+ A + R Sbjct: 78 WWKRYRSPALDALVDEGLRNSPTLAAAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRER 137 Query: 108 FI--PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVIS 158 + P + GQL + + +DLFG R +L+ +D Q++ A+ + + Sbjct: 138 ALGMPAFGPQTVLYNVFAGQLQASYTLDLFGAARFANRALSKRVDVNAYQLESARRALAA 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E+++ +++ L ++ + + GA S+ ++ ++E+ Sbjct: 198 NIVTAAVTSAALAEQVATTERLVALAREQASDAAARHRLGAASRTDMLNTRQSAAALEAS 257 Query: 219 IPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 +P L + + H ++ LLG PA L +L++P + + +P+ L Sbjct: 258 LPALRQQAQSARHALAVLLGRTPDAAPANLALA-----------DLHLPQDVPVVVPSTL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFP----GYNTHWSF 326 ++ RPDIR E L + A++G+A + ++P LSL+ S+ H +P G WS Sbjct: 307 LQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSV 364 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L P+F G + + R A +S +++TVL A ++V + L ++ D Sbjct: 365 GASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|50086115|ref|YP_047625.1| putative outer membrane protein precursor [Acinetobacter sp. ADP1] gi|49532091|emb|CAG69803.1| putative outer membrane protein precursor [Acinetobacter sp. ADP1] Length = 464 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 111/446 (24%), Positives = 198/446 (44%), Gaps = 18/446 (4%) Query: 15 LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVK--IA 68 L GC V Y P + P+ F ++ N +WW F D LN+LV IA Sbjct: 19 LVGCAAVVKTPYNAPTVQT-PSSFQYDKTQATSNYANYADRWWTLFGDAQLNQLVDQVIA 77 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----W 124 +L + T + K + + + +S S S N S+ L + + Sbjct: 78 KNTDLAVAGITLQQARLKAGLAADQQGPRVNSSVSTSQNIDVNSGDKSSNGLSLNAGVSY 137 Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFG+ R E++ + + +I Y + E +S A Q L Sbjct: 138 ELDLFGKLARQTEAAKWEALATAQDLQATAQTLIGTTTKLYWQLAYLNESLSTAQQSLAT 197 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K L + ++ GA S L L + E ++S ++++ +++S ++ LL P Sbjct: 198 SEKLYSLVNTQYQAGAVSGLDLTQAEQSVQSQKANLSQIQQSLVETRTALAVLLHIP--- 254 Query: 244 FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + + Q P + +P I G+PA ++ RPD+R E +L +++A + YPS Sbjct: 255 -VQQLNIQEPQRLPQVNLPQIQAGLPASILSRRPDLRAAELRLRETLATKDATTASYYPS 313 Query: 303 LSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 +SL GS+ + + N + G L LP +K NI ++ ++ I +++T Sbjct: 314 ISLTGSLGSSSTSLTELIKNPVLALGANLSLPFLQYNDMKKNIAISQLDYEKAIIQYRQT 373 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 + A +VENAL++ E + V Q +EL +K+ L+ + Y G +L ++LD ++ T Sbjct: 374 LYQAFADVENALSARTELNQQVQFQQRNLELAEKAERLTDVRYLNGAIALKNVLDQQQTT 433 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIG 447 + L K+ +YV L A+G Sbjct: 434 RTARLSLVNTKQNQYNAYVTLMQALG 459 >gi|296100424|ref|YP_003610570.1| multidrug efflux transport outer membrane protein EefC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054883|gb|ADF59621.1| multidrug efflux transport outer membrane protein EefC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 454 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 215/464 (46%), Gaps = 37/464 (7%) Query: 8 FSLFIVLL--AGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 S+F++ L AGC ++ P Y +P P+ LP G + +++ +W + ND L Sbjct: 4 LSVFVLALMSAGCVSLDPTYQRPAAPVPATLPGAH--GEATAMVS----QWQQVMNDARL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 +V +AL N + +A I+AA+ R+ LFP+ A +SH +T ++G Sbjct: 58 KGVVTMALNSNRDLQKAIADIDAARAQYGETRSSLFPTVDAELSH---TRSRTLASGVAT 114 Query: 122 SD--------WKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 SD +++DLFG+ + + + L S + + +L ++S+L +++ Sbjct: 115 SDEANGTVSSFELDLFGRNQSLSRAARETWLASEFTAQNT-RLTMVSELTTAWVTLAADN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A ++ ++ + + G + + + A + + + + + + + Sbjct: 174 SNLALAKSTMESAASSLRIVKRQQQVGVAAATDVSEAMAVYQQARASVASYQTQVMQDKN 233 Query: 232 NISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ L G P T ++ S+N I G+ + + RPDI+ E L + Sbjct: 234 ALNLLAGDTVPDTLLPGTLESLSDN----AITLIPAGVSSSALLRRPDIKEAEHNLLSAN 289 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIR 345 A IG A+++ +P++SL S + D S +H WSF P + LP+F G + +R Sbjct: 290 ANIGAARANFFPTISLTASAGVGSD-SLSSLFSHGMKVWSFAPSITLPLFSGGNNLAQLR 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AE+ + T+++T+ +A K+V +AL + + + V +K++ ++ +Y+ Sbjct: 349 YAEAEKKGLIATYEKTIQSAFKDVADALARRETLSEQLDAQREYVAAEQKTLDVATRSYQ 408 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L +L +R+ + L ++ ++ + L+ ++G G Sbjct: 409 AGAGDYLTVLTAQRSLWSAQESLISLQQTDLENRITLWQSLGGG 452 >gi|237812487|ref|YP_002896938.1| efflux transporter, outer membrane factor [Burkholderia pseudomallei MSHR346] gi|237505852|gb|ACQ98170.1| efflux transporter, outer membrane factor [Burkholderia pseudomallei MSHR346] Length = 634 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 169/353 (47%), Gaps = 38/353 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + ++AA+E + + + + L P+ A + R Sbjct: 78 WWKRYRSPALDALVDEGLRNSPTLAAAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRER 137 Query: 108 FI--PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVIS 158 + P + GQL + + +DLFG R +L+ +D Q++ A+ + + Sbjct: 138 ALGMPAFGPQTVLYNVFAGQLQASYTLDLFGAARFANRALSKRVDVNAYQLESARRALAA 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E+++ +++ L ++ + + GA S+ ++ ++E+ Sbjct: 198 NIVTAAVTSAALAEQVATTERLVALAREQASDAAARHRLGAASRTDMLNTRQSAAALEAS 257 Query: 219 IPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 +P L + + H ++ LLG PA L +L++P + + +P+ L Sbjct: 258 LPALRQQAQSARHALAVLLGRTPDAAPANLALA-----------DLHLPQDVPVVVPSTL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFP----GYNTHWSF 326 ++ RPDIR E L + A++G+A + ++P LSL+ S+ H +P G WS Sbjct: 307 LQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSV 364 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L P+F G + + R A +S +++TVL A ++V + L ++ D Sbjct: 365 GASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|71737525|ref|YP_274581.1| outer membrane protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558078|gb|AAZ37289.1| outer membrane protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 469 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 114/466 (24%), Positives = 208/466 (44%), Gaps = 35/466 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LL GC + P+Y +P P+ LP S + + D + W F D L +L + Sbjct: 12 ALLTGCVNLAPDYQRPEAPVSSQWLPATASQPVASGSVPTD-IDWQNFFTDKRLIRLQTL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ A P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIECAASLPTIDASGSGTHTRTPS-STSMTGKSSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +++ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G E L + Q + + +P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHSLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L GS + + F + WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTANAGSASTSLSGLFTSGSGSWSFAPSISVPIFDGGSNRATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ YR Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELADALYRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 423 GSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|294673088|ref|YP_003573704.1| multidrug resistance protein, AcrB/AcrD family [Prevotella ruminicola 23] gi|294472385|gb|ADE81774.1| multidrug resistance protein, AcrB/AcrD family [Prevotella ruminicola 23] Length = 1502 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 101/422 (23%), Positives = 192/422 (45%), Gaps = 38/422 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 W E+F + L L+ AL N + Q ++ AAK + + +LFP+ + + RF Sbjct: 1093 WREAFTEPRLVALIDEALLHNSDLQQGHLQVQAAKALLRGAKGELFPAIGLTAEKSNSRF 1152 Query: 109 I-PNLKTNSTGQ---LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPS 163 + S+G L++ W+ID FG+ R+ + + A ++ A + +I+ + + Sbjct: 1153 KNSDFTATSSGYNVGLEASWEIDAFGRVRNAKRGAAATVEQQMAYEQAVRTELIATVAAA 1212 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + +I+ I+ +++ I + G + + + EA E+ + L Sbjct: 1213 YYQLEMYDAQIADTRSIIQSWEEGIATQKVLLAVGEATSDDVDQSEAAKLEAETTLEELC 1272 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR---NRPDIRY 280 R + + T+LG P Q + + I I+ +P+ IR RPD+R Sbjct: 1273 MQLRQAENALCTVLGRPC-------QHIDRDSLGSSCIAIS-SMPSISIRALARRPDVRQ 1324 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDK 337 E +L + A++ LYPSLSL+GSI T+D P + G L PIF Sbjct: 1325 AEAELKAAFYATNEARAALYPSLSLSGSIGWTNDVGEIVSPAGVLMSALG-SLTQPIFQG 1383 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-------INEDKKIVTKLQHAV 390 G++++ ++RA++ + + +++TVL A +EV + L + I+ ++ V KLQ Sbjct: 1384 GRLRAEVQRAKAEQEAAKVAFRQTVLEAGQEVNDILATEQYARRAISLGEQQVEKLQRIA 1443 Query: 391 ELHKKSMSLSM-INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + K M +NY L +L ++ + + L + ++ +++ LY A+G G Sbjct: 1444 DASKVRMQYDEDVNY-------LQVLLARQSLLEARLQLLAHRYEMIAAHIQLYKALGGG 1496 Query: 450 YN 451 + Sbjct: 1497 MD 1498 >gi|289673330|ref|ZP_06494220.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 282 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 6/257 (2%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI R + R++I ++ + + +E L +G + + ++EAE+ +++ +P L Sbjct: 5 TYITIRGLQARLAITNRQVKTRQDLLEKVQLLHERGLSPDYEVRQIEAELLQVQATVPIL 64 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + ++ + +LG P H P+ + G PADL+R RPD+ E Sbjct: 65 QTGLDAAMNALDVMLGVPPGT--HRGSLAETGRIPHAPALASTGTPADLLRRRPDLIVAE 122 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 ++LA S A+IG+A S+ YP LSL+ + A++ N F G + + L +FD G Sbjct: 123 RRLAASNARIGVAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGILGLRWRLFDFG 182 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + I +A+ E ++++VL A ++VENA +S+ + L + + Sbjct: 183 RVNARISQAKGQEAEALAAYRQSVLRATEDVENAFSSLASRETQAAMLGKSETALASARQ 242 Query: 399 LSMINYRQGRYSLLDIL 415 S +Y +G SL+++L Sbjct: 243 SSFASYSKGAASLIEVL 259 >gi|224025641|ref|ZP_03644007.1| hypothetical protein BACCOPRO_02381 [Bacteroides coprophilus DSM 18228] gi|224018877|gb|EEF76875.1| hypothetical protein BACCOPRO_02381 [Bacteroides coprophilus DSM 18228] Length = 460 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 100/468 (21%), Positives = 201/468 (42%), Gaps = 47/468 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +++ C + Y +P P T ++ N+ N L W + F D Sbjct: 10 CLAAMMSSCHIYKSYDRPETIDASGIYRDPASATDTLAADTTNMGN---LPWKDIFRDAK 66 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L L++ L N+ + A R+ AK + S + PS +P S Sbjct: 67 LQALIEEGLANNVDMQAAALRVQEAKVMLTSAKLSYLPS------INLVPQGTATSMDGG 120 Query: 120 ---------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YID 166 + + W++D FG+ I ++ AY Q ++ V S++I Y Sbjct: 121 TYVKAYQLPVAASWELDFFGK---ILNTKRGQKVAYEQSKYSEQAVRSQIICGIANIYYS 177 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ I + +YK+N+ + G T++ ++ ++ A +E+ + L++ Sbjct: 178 LLMLDRQVEITTETAAIYKENVRVMEAMKIAGMTTEAAVAQMRAASHQVEASLMELKRQV 237 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R +++S LL P T + + +Q P + G+P L+ NRPD++ E L Sbjct: 238 RETENSLSVLLAKAPQTIDRNTLDEQ---VMPE---ELAAGVPMQLLENRPDVKIAEMTL 291 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++ YP L++ + T+ + PG + L PIF+ GK+ Sbjct: 292 ASAYYTTNSARAAFYPGLNITATAGWTNGSGISVANPGQFMLQALA-SLAQPIFNHGKLI 350 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N++ +++ + + +Q+T+L A KEV +AL + K + + + VE K+++ + Sbjct: 351 ANLKVSKAEEKIARMNYQQTILEAGKEVSDALYLFDTQNKKLIEDRGQVEQLDKAVTYTK 410 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ G + L+IL ++ ++ Q ++ ++LY A+G G Sbjct: 411 ALFQSGDATYLEILTAQQNLLSAQLSEVSDNFQRMQAVINLYSALGGG 458 >gi|76810468|ref|YP_333692.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|254259647|ref|ZP_04950701.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76579921|gb|ABA49396.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] gi|254218336|gb|EET07720.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 634 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 179/388 (46%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|207724396|ref|YP_002254793.1| outer membrane chanel lipoprotein (partial sequence c terminus) [Ralstonia solanacearum MolK2] gi|206589616|emb|CAQ36577.1| probable outer membrane chanel lipoprotein (partial sequence c terminus) [Ralstonia solanacearum MolK2] Length = 292 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 7/267 (2%) Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--YPATEFL 245 ++L+ KF G + L + +A + + + + + + TL G + A L Sbjct: 1 MQLTERKFGAGFVAPADLGQAQAPVADATNALESQRAQCAQGLDQLVTLTGLDHAALAAL 60 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 K P+ P +PA ++ RPD+ E+ +A + A IG+A + PSL+L Sbjct: 61 LAPGKGRMPAPPDAGAPD---VPAQVLSQRPDVSSAERAVAGASADIGVAVASRLPSLTL 117 Query: 306 NGSIAL-THDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 GSI + T S T WSFGP + LP+FD G + + A + + +++ V Sbjct: 118 AGSIGINTFQISGQSLTTKSWSFGPSVSLPVFDGGSGAARVETARARYDQALASYRAKVR 177 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A++EVE+AL ++ + + A + K + + YR G SLL + D+ R T Sbjct: 178 QAVQEVEDALVRLDAAGRRLDAATVADAQYTKVLEAASARYRLGAGSLLQLEDVRRTTLS 237 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + + A+++V LY A+G G+ Sbjct: 238 ASQALAAVQLERAQAWVALYKAVGGGW 264 >gi|255011938|ref|ZP_05284064.1| putative transport related, lipoprotein [Bacteroides fragilis 3_1_12] gi|313149774|ref|ZP_07811967.1| multidrug efflux pump channel protein [Bacteroides fragilis 3_1_12] gi|313138541|gb|EFR55901.1| multidrug efflux pump channel protein [Bacteroides fragilis 3_1_12] Length = 457 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 204/461 (44%), Gaps = 30/461 (6%) Query: 7 IFSLFIVL-LAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 I SL L L+ C + +Y KP + L Q S + N+ +L W E F D L Sbjct: 5 IISLAATLALSSCGIYSKY-KPATEVPDGLYGQEGANPSDSASNLGSLPWQEVFTDPCLR 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ 119 L+ AL +N + A R+ A+ +LS R P+ S + F K + T Sbjct: 64 TLIDTALVRNTDLRTAHLRVKEAEATLLSARLSYLPAFSLSPQGTASSFDGG-KASQTYS 122 Query: 120 L--DSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 L + W+ID+FG+ +R ++ +A Y QV + +I+ + +Y + Sbjct: 123 LPVSASWEIDIFGRLTNAKRRAQAVVAQ-SRDYEQV--VQTQLIAAVANNYYTLLMLDAQ 179 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I I+ +K+++ + G ++ +L + EA +I + + L + + + Sbjct: 180 IEISTATEAAWKESVATTRAMKAAGMVTEAALSQTEATYYNICTTLLDLREQLNQVENAL 239 Query: 234 STLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 S LL P T + +Q L +++G+P ++ NRPD+R E+ LA + Sbjct: 240 SLLLADVPRTLPRGRLAEQ------RLPENLSVGVPLQMLANRPDVRSAEQSLAQAFYTT 293 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A+S YPS++L+GS T+ PG + L P+F++G + +R A+ Sbjct: 294 NAARSAFYPSITLSGSAGWTNSAGAMIVNPGKFLATAVA-SLTQPLFNRGANIAQLRIAK 352 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + +E +++++T+LNA EV NAL + + V + + + + + G Sbjct: 353 AQQEEARLSFEQTLLNAGSEVNNALVQYQTARDKANYFEKQVASLENAARSTQLLMKHGN 412 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L ++ ++ + + + LY A+G G Sbjct: 413 TTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 453 >gi|134295789|ref|YP_001119524.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134138946|gb|ABO54689.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 527 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/365 (23%), Positives = 170/365 (46%), Gaps = 38/365 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW + +LN LV L+ + T+ A ++AA+E + + + + + PS A ++ R Sbjct: 74 WWTQYRCAALNALVDEGLRNSPTLSAAAHSLDAAREQLRAQIGSSMLPSIDAGGQAVRQR 133 Query: 108 F----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNV 156 IP L + GQL + + +DLFG R +LA +D + Q++ A+ + Sbjct: 134 ALGVPIPALGAPTLLYDTFVGQLQASYTLDLFGAARFANRALAKRVDVSAFQLESARRAL 193 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I +I+ +++ L + ++ G+ S+ + + + Sbjct: 194 AANIVTASITVSVLNAQIATTERLVALANDQAHDAQRRYALGSASRSDALNAQQSADTFA 253 Query: 217 SDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 + +P L + H ++ L+G PA L +L++P + + +P+ Sbjct: 254 ASLPALRQQRDTARHALAVLIGRTPDRPPADLTLA-----------DLHLPDEVPVVVPS 302 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWS 325 L+ +RPDI+ E L + A++G+A + L+P LSL+ +I S+P G W+ Sbjct: 303 GLLHSRPDIQAAEAGLRAAAAEVGVATAQLFPQLSLSAAIG-QGGFSWPAMLSGGGAIWN 361 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G L P+F G + + R A++S + +++TVL A + V ++L ++ D + + Sbjct: 362 VGASLSQPLFHGGALLAQRRAAKASYEAAVDQYRQTVLAAFQNVADSLAALEHDAQALQA 421 Query: 386 LQHAV 390 HA Sbjct: 422 SSHAA 426 >gi|313200208|ref|YP_004038866.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312439524|gb|ADQ83630.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 495 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 102/468 (21%), Positives = 196/468 (41%), Gaps = 32/468 (6%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +L + + L+ C+ P P + P ++ + + +WW+SF L Sbjct: 35 RLLGGMMGIVAASLSACSSTPPQPLPATSV-PDRWQYATGSVAADAVSQQWWQSFGSDEL 93 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---------SHRFIPNL 112 ++L+ A + + + A R+ A A L P + SHR Sbjct: 94 DQLLTRAQRDSFDVQAAAARVEQAVAQARIAGAPLLPELNLGVNASRQDYLDSHRTADG- 152 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++ T L + +++D +G+ R + + + L S+ +D +L + S + Y+ Sbjct: 153 -SSHTVALAASYEVDFWGRNRALRDRARYQLQSSRHDLDTVQLTLTSGVARLYLQVLGLA 211 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER+SIA + + +E+ ++ GA + L + + + S + + TL + Sbjct: 212 ERLSIAELNVANASRVLEVVEARYRAGAATALEVAQQRGLLASQQRTLETLRQQLADGKT 271 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L+G P E + Q P I G+PA L+ RPDI E LA + A Sbjct: 272 ALAVLIGLPPAELVISGQGLQGVQTPQ----ITPGLPAQLLVRRPDIARAEAALAAADAN 327 Query: 292 IGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A++ + P + L GS+ L + + P Y S L P+F+ G++ + Sbjct: 328 TIAARAAMLPRVQLTGSLGLGGEQWSDMLAHPIY----SVAAALTAPVFNAGRLAAGRDL 383 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + E ++ ++ A +VE AL ++ ++ + +++ L+ YR Sbjct: 384 ALAQRTELLQNYRAAIVAAFGDVETALNAVQAIEQQRRWQSEELAQAERAFRLAETRYRA 443 Query: 407 GRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LL +LD +R + V L++A Q V L+ A+G G+ Sbjct: 444 GADTLLTMLDAQRTWYSAQDQAVQLTLANLQ---GRVALFKALGGGWQ 488 >gi|150009497|ref|YP_001304240.1| putative multidrug resistance protein [Parabacteroides distasonis ATCC 8503] gi|256838229|ref|ZP_05543739.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937921|gb|ABR44618.1| putative multidrug resistance protein [Parabacteroides distasonis ATCC 8503] gi|256739148|gb|EEU52472.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 455 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 110/470 (23%), Positives = 210/470 (44%), Gaps = 44/470 (9%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFN 57 R I +L + V+L C + YTK + P + S+ DT + W E F Sbjct: 3 RHIITLAVSCVMLNSCGI---YTK-YKPASEVSADLYGSEATAQTDTVSLGDMSWREVFT 58 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D L L++ L N A R+ A+ +LS + P+ +A + + ++ Sbjct: 59 DPQLQTLIEHGLANNTDYRSAQLRVEEAEAALLSAKLAFLPA-FAFAPQGAVSSFDSHKA 117 Query: 118 GQ-----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDAR 168 Q + + W++D+FG+ R+ + L YAQ + V ++LI +Y Sbjct: 118 TQTYSIPITASWELDIFGKMRNAKKQAQAL---YAQSQDYRQAVRTQLIAGIANTYYSLL 174 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ I+ Q +K+ + + G ++ ++ ++EA SI + I L++ Sbjct: 175 MLDAQLKISEQTASSWKETVNSTRALMNAGIVNETAVSQMEATYYSICTSILDLKEQINQ 234 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 +++ LL + H +Q+ N +P ++GIP L+ NRPD+R E L Sbjct: 235 VENSLVLLLA----DTPHTIQRGE---LENQQLPKHFSVGIPVYLLSNRPDVRAAEHALE 287 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKS 342 + A+S YPS++L+GS T+ PG + G L P+F +G++ Sbjct: 288 SAFYATNQARSAFYPSITLSGSAGWTNSAGAVITNPGKFLASAVG-SLTQPLFARGQLLG 346 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQ-HAVELHKKSMSL 399 ++ ++ +E +++++ +LNA EV +AL + DK + + Q ++E KS SL Sbjct: 347 QLKITKAQQEEARLSFEQALLNAGTEVNDALVQYHTARDKAVYFEKQIESLERAYKSTSL 406 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 M + G + L++L ++ ++ + + ++LY A+G G Sbjct: 407 LM---QHGTTTYLEVLTAQQGLLNAQLTQVANRFTEIQGVINLYQALGGG 453 >gi|170698088|ref|ZP_02889169.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170137049|gb|EDT05296.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 520 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 101/462 (21%), Positives = 204/462 (44%), Gaps = 34/462 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D L+ L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYDDPQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------- 119 N TI Q+ A+ + RA FP+ + S + +T+++ Sbjct: 85 SNQTIAQSAAAYRQARALVAEARAAYFPTVGLTASGSRARSGRTSTSSSASGFGSSSSIS 144 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 NSYSVGLDASWEPDLWGKVSRSVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDA 204 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Y +++L+ ++ QG ++ +++ + +++S ++ + H Sbjct: 205 LQKLLDDTVKSYGDSLKLTQNQYAQGVAARADVIQAQTQLQSAQAASIDNGVARAQYEHA 264 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TL+G PA+ F + QP + P+++ P+ L+ RPDI E++ A + +I Sbjct: 265 IATLIGEPASTF--SLPPNPLTAQPPI-TPVDV--PSALLERRPDIAAAERRAASANEQI 319 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A + +P+L+L+ + F W+ GP+L +FD G + A + Sbjct: 320 GVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTDAARA 379 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++ VL A ++VE+ L S + V + AV+ + ++++ Y+ G Sbjct: 380 TYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAVDSAEHALAIVTNQYKAGTV 439 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L++L + + L+ Q S V L A+G G++ Sbjct: 440 AYLNVLSAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWD 481 >gi|295677071|ref|YP_003605595.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295436914|gb|ADG16084.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 539 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 102/472 (21%), Positives = 205/472 (43%), Gaps = 29/472 (6%) Query: 6 AIFSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDT 59 A S+ +LL AGC + + +GN+ N D WW ++ND Sbjct: 10 AAASVLTILLTIAGCASTGGVAPQTRTINASSLDVGNAIRAANADAQWPAADWWRAYNDP 69 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL---- 112 LN+ + A N ++ A R+ A RA L P S+S ++ N+ Sbjct: 70 QLNQWIADAEAGNPSLAVAQARVREAASMAGVARAALAPHVNGSLSIQREQWPDNVFYGP 129 Query: 113 -------KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N+TG L + +D +G+ ++ E +L ++ A A+L + + ++ +Y Sbjct: 130 GPLAGEQSWNNTGTLALAYHLDFWGKDKNAAERALDLAHASAADARAAQLELQANVVRTY 189 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I+ R+ IA L ++ ++L++ + G ++L + + E + E I +E+ Sbjct: 190 IEMSLSYARLDIAKATLQQQQQIVDLANRRLKGGIGTQLEVSQAETPMPEYERQIDAIEE 249 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + + ++ L G +Q+ + + +PA+LI +RPD+ Sbjct: 250 NIALGRNQLAALAGK-GPGAGDAIQRPT--LSLAAPAGLPAALPAELIGHRPDVVAARWT 306 Query: 285 LADSVAKIGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 +A I +AK+ YP + S+ G A+ F +H WS GP L LPIFD G+ Sbjct: 307 VAAQARGIDVAKAGFYPDINLLASIGGYAAMGPLFQFLKSPSHSWSVGPALTLPIFDGGR 366 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++S + A + E + ++++ A+K++ + + I +V +++ L Sbjct: 367 LRSQLGAASAGYDEAVERYNQSIVTALKDISDQVIRIRSLTTQADDADRSVAAARRNYDL 426 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +R+G L++L + + + ++ + + ++ L A+G G + Sbjct: 427 SREGFRRGLTDYLNVLVAQNQLLRAQEGVAKVQAERLGAHASLMTALGGGLD 478 >gi|209520201|ref|ZP_03268972.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209499360|gb|EDZ99444.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 506 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 200/457 (43%), Gaps = 60/457 (13%) Query: 33 PTQFSIGNSKNLINID----TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 PTQ+ ++++L N +L W F D L KL+ AL N +I QA R+ A Sbjct: 44 PTQYE--STQSLPNEGGQWPSLDWANQFGDPQLPKLITEALDGNPSIAQAQARLAKASSY 101 Query: 89 ILSVRADLFP---SSYASISHRFIPN-LKTNSTGQL---------DSDWKIDLFGQ-RRH 134 I S RA LFP +SY+ F N L G + W +DL+G+ R+ Sbjct: 102 IESSRAALFPKVNASYSWTRELFSANALYPPPFGGTWFSENNLLASASWDLDLWGKNRQR 161 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSY-----------IDARHFKERISIAHQILDL 183 + +++ +A A + A++ + + + +Y I AR R + D Sbjct: 162 LGQAVSQQKAAEADMQQARVTLAASVASTYNQLAQLYAFRDISAREIANRQDVGRITDDR 221 Query: 184 YKKNIELSHLKFTQG---ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + ++ + K T ATS+ +L L+ +I + + + LLG Sbjct: 222 VRAGLDTNVEKQTAAGNIATSQSNLTDLDGQITVVR--------------YQLGALLGKG 267 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L + K + +P NI PADL+ R DI ++ ++ + AK++ Y Sbjct: 268 PDRGLQ-IDKPVLTGGNVVALPDNI--PADLVARRADIVAARWQVEAAMHDVKEAKAEFY 324 Query: 301 PSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P ++L G A + + FGP ++LPIFD G +++ ++ + + Sbjct: 325 PDVNLAAGFGFDAFGWGHFLTAASRQIQFGPAIHLPIFDAGALRAQLKGRYADFEGDVAN 384 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL-- 415 + +T++NA+++V ++SI + Q A+E K+ L++I Y+ G L +L Sbjct: 385 YNQTLINALQDVSTQVSSIRSIDRQEGDAQRALEASSKAYQLAVIRYKAGLSPQLQVLTA 444 Query: 416 DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSGYN 451 D R A+ V L + +R L + L A+G G++ Sbjct: 445 DDNRLAAEQTVTGLQMRRRSL---QIGLIKALGGGFD 478 >gi|307729922|ref|YP_003907146.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307584457|gb|ADN57855.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 549 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 94/404 (23%), Positives = 184/404 (45%), Gaps = 48/404 (11%) Query: 14 LLAGCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 +LA C+ GP P +P + QF +G +WW+ Sbjct: 61 MLAACSFGPSGEPPALPQPVHYGSEAQPAQTVAAQGVAQQFMVGAKP------VPQWWKL 114 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--I 109 + +LN LV L+ + T+ + + AA+E + + + + L P+ A + +R I Sbjct: 115 YQSDALNALVDEGLRNSPTLAATEQTLAAAREQLRAQIGSSLLPTIDAGGQATRNRALAI 174 Query: 110 PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIP 162 P + +N+ GQL + + IDLFG R +++LA + A Q+D A+ + + ++ Sbjct: 175 PEIGSNTFLYNIFVGQLQAHYTIDLFGAARLADAALAARVNVQAYQLDAARRALAANIVS 234 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + I + +I +++ L + ++ GA S + + S+ + +P L Sbjct: 235 AAITSAALHAQIDTTERLVTLANDQARDTQRRYALGAVSHADQLSAQQNAASLSASLPGL 294 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRY 280 + ++ H ++ LLG ++ S L +P + + +P++L+R RPDI+ Sbjct: 295 RQQWQTTRHALAVLLGRTPDAAPGDLELAS------LRLPQQVPVVVPSELLRARPDIQA 348 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + L + A +G+A + +YPSLSL+ S+ + + G WS G L P+F Sbjct: 349 ADAALKAAAADVGVATAQMYPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHG 408 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 G + + R A ++ + +++TVL A + V + L ++ D + Sbjct: 409 GALVAQRRAAMNTYEATVSQYKQTVLAAFQNVADTLAALEHDAQ 452 >gi|224588368|gb|ACN58992.1| NodT family RND efflux system [uncultured bacterium BLR19] Length = 479 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 104/480 (21%), Positives = 210/480 (43%), Gaps = 39/480 (8%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYT-KPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 IL+ +FI L GP + K P +F +S++ IN ++W E F D L Sbjct: 8 ILKYAGIIFISLAYTACTGPYLSQKIENKTTPKEFY--SSQDTINTVKIQWKEFFTDPYL 65 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH----------- 106 L+ AL+ N + IN A + + + + P A + Sbjct: 66 TTLIDTALRNNQEFNIILQEINIANNEVRARKGEYLPFVDIEGGAGVEKVGEYTRNGAVE 125 Query: 107 --------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVI 157 + PN N + W++D++ + R+ +++ L S + N+I Sbjct: 126 KNSEIQPGKEFPNPLPNYVIAATASWEVDIWKKLRNAKTAALYRYLSTVEGKNFMVTNLI 185 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ SY + ++ I + +++ + +E+ ++ ++L++ K EAE+ +S Sbjct: 186 AEIANSYYELMALDNQLEILRKNIEIQQNALEIVKMEKAAAKVTELAVRKFEAEVLKNQS 245 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ + I+ L+G F + + S F + I+ GIP+ L+ NRPD Sbjct: 246 RQFYILQAIVETENKINFLVG----RFPQPVLRNSQTFTDLVPREISAGIPSQLLTNRPD 301 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLY 331 I+ E +L + + A+++ YPSL + + N P + + +S G +L Sbjct: 302 IKQAELQLVAAKLDVKSARANFYPSLRITAGVGFEAFN--PKFLINSPQSLLYSLGGQLM 359 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+ ++ IK+ A S +Q +++T+L A EV N L++IN + VE Sbjct: 360 QPLINRNAIKAYYYSATSKQIQQAFNYEQTILKAYIEVANQLSNINNLESSYALKAKQVE 419 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S+++S ++ R +++L +R + + +L K + V++Y +G G+N Sbjct: 420 ALTESIAISTRLFKSARADYMEVLLTQRDALEAKFELIETKMHQMNARVNIYQQLGGGWN 479 >gi|152981442|ref|YP_001353371.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] gi|151281519|gb|ABR89929.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] Length = 480 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 97/409 (23%), Positives = 198/409 (48%), Gaps = 28/409 (6%) Query: 52 WWESFNDTSLNKLVK--IALQQNLTILQATERIN--------AAKENILSV----RADLF 97 WW F D LN L + +NL L A +A+ LSV D Sbjct: 54 WWTLFQDPVLNDLEGRLVVGNENLKSLVAQVAAARAAVAASYSARLPTLSVGLAGSRDSN 113 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 PSS + + N N + ++ W++DL+G+ + + ANL ++ + A+L+ Sbjct: 114 PSS--TTRSTTVQNPSNNVSLSGNASWEVDLWGRLAQATTGAQANLQASVDDLAAARLSA 171 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + L +Y R ++S+ + + Y+++++L+ ++ G +++ +++ + ++K+ + Sbjct: 172 QATLAQTYFSLRTTDAQLSVLERSVAAYQRSLDLTQFRYGGGVVARVDVLQAQTQLKAAQ 231 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + + H I+ LLG P + +++ ++ Q L + +P L+ RP Sbjct: 232 AQLAEAIAQRAILEHAIAVLLGVPPSAL--ALERNASLPQAPLVPQM---LPTTLLERRP 286 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLP 333 DI ++++A + A+IG+A + +PSL L+ + N N WS G + Sbjct: 287 DIAAAQRRVAAAYAQIGVAHAAYFPSLVLSAGGGYQNSSLSNLISAPNLFWSLGASVAQA 346 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+ + +A+S A + +++TVL A++EVE+ L + ++ Q ++E Sbjct: 347 IFDGGQRQLASAQAQSVADQATSAYRQTVLTALQEVEDNLILAAQLQQEAQLQQESLEAA 406 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVD--LSIAKRQLAKSYV 440 ++++ +++ YR G S L++ I + TA V + LS R+LA + + Sbjct: 407 QRTLEITLDQYRAGTVSYLNVA-IAQTTALVSENNLLSTQNRRLAATNI 454 >gi|264676274|ref|YP_003276180.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262206786|gb|ACY30884.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 473 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 117/442 (26%), Positives = 222/442 (50%), Gaps = 15/442 (3%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC PE K P +++ + +WW ++ND +LN LV AL QNL + Sbjct: 24 AGC-AAPEAVKLDRTTPPQWQQQESAQKSDPAELAQWWRAWNDPALNALVDEALAQNLDV 82 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---GQLDSDWKIDLFGQR 132 QA R+ ++ +L+ AD S R + ++ T +D W + LFG Sbjct: 83 AQAVLRLR--QQRLLAGTADAAFRPIVSTGARTLQDIAAVDTYFHASIDVSWDLGLFGDS 140 Query: 133 RHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 + A LD A AQ+ A++ +++ ++ Y+D R + + S+ + L ++ ++L Sbjct: 141 AAARRAGAAGVLD-AQAQLHAARVALVADVVHRYLDIRLAQVQRSLVERQLQQAQRQLQL 199 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 ++ Q T SL + + ++++ ES + TL ++ H ++ LLG E ++Q Sbjct: 200 LQIRHEQRLTDAQSLEQQQLQLRTAESQLSTLNEAQARAAHALAALLGRERAEP-QWLQP 258 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 +++ P + + + +PADL+RNRPDI+ E + + A++G++++ LYP L+L GS+ Sbjct: 259 RTDAALPAMQA-LAV-LPADLLRNRPDIQSAEAAVEQAAAEVGVSRAALYPRLTLTGSLL 316 Query: 311 LTHDNSFPGYNTHWSF---GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 ++ + T S GP++ +P+FD G+ ++ E + Q +++ VLN I Sbjct: 317 YAYNLTRNHRTTSDSIPMVGPQIDIPLFDWGRRRAVADGKELALQASIKAYRQAVLNGIA 376 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 E E AL ++ ++ +L+ ++H + + G S L +D RA+ + + + Sbjct: 377 EAETALAAVAAQQQRQQQLKSQQQIHAGREKAQAVRQQLGLSSELAGIDSARASLQNQSE 436 Query: 428 LSIAKRQLAKSYVDLYIAIGSG 449 L+ A+ A +YV LY A+G+ Sbjct: 437 LATARAAEALAYVALYKAVGAA 458 >gi|126441364|ref|YP_001059140.1| Outer membrane protein [Burkholderia pseudomallei 668] gi|126220857|gb|ABN84363.1| outer membrane protein [Burkholderia pseudomallei 668] Length = 574 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 178/388 (45%), Gaps = 45/388 (11%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW + +L+ LV L+ + T+ Sbjct: 50 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWTRYRSPALDALVDEGLRNSPTLA 102 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 103 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 162 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 163 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 222 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----- 238 ++ + + GA S+ ++ ++E+ +P L + + H ++ LLG Sbjct: 223 AREQASDAAARHRLGAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA 282 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 PA L +L++P + + +P+ L++ RPDIR E L + A++G+A Sbjct: 283 APANLALA-----------DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVAT 331 Query: 297 SDLYPSLSLNGSIALTHDN-SFP----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + ++P LSL+ S+ H +P G WS G L P+F G + + R A +S Sbjct: 332 AQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASY 389 Query: 352 QEQYITWQETVLNAIKEVENALTSINED 379 +++TVL A ++V + L ++ D Sbjct: 390 DAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|298717517|ref|YP_003730159.1| RND efflux system outer membrane lipoprotein [Pantoea vagans C9-1] gi|298361706|gb|ADI78487.1| putative RND efflux system, outer membrane lipoprotein precursor [Pantoea vagans C9-1] Length = 476 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 104/485 (21%), Positives = 205/485 (42%), Gaps = 55/485 (11%) Query: 1 MNILRAIFSLFI-VLLAGC-TVGPEYTKPHMPLL---PTQFSIGN-SKNLINIDTLKWWE 54 M I ++F+ LAGC ++ P Y +P ++ P+ + N +N IN + W + Sbjct: 1 MTISAKCLAVFLPCFLAGCVSLDPHYARPDNAVVAATPSGEAYRNLQQNAINYRDVGWQD 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-- 112 D L ++V +AL + + +A + +A RA+LFP+ A +S L Sbjct: 61 YVQDPRLRQVVAMALDNSRDLREAVASVKSAHAQYGEQRANLFPTLSADVSGTRSRALTG 120 Query: 113 KTNSTGQLDS--------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISK 159 + N T +S +++DLFG+ R+ E+ L L+ A + +L ++ Sbjct: 121 EGNQTALGNSYSAEGSVSSFELDLFGKNQSLSRQQYETYLGTLEGARS----TRLTLLYN 176 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + ++ + + IA + + ++++E++ + G S + + E +S SD+ Sbjct: 177 TVDYWLQLAADRSNLEIAKETAESTRQSLEVTRKRLQNGVASMVDVASAETTWQSALSDV 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI------------GI 267 + S + + + ++G P+ +P NI G+ Sbjct: 237 ASYTTSVAQDKNALDLVVGKSV---------------PDNLLPQNIESVGQALRDVPAGV 281 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHW 324 ++ + NRPD+ E L + A IG A+++ +PS+SL S + + F W Sbjct: 282 SSEALINRPDVLQAEHNLKAANANIGAARANFFPSISLTASGGVGSSDLSSLFKNGAGIW 341 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF P + LPIF G S + ++ + +++ V A +EV +AL + Sbjct: 342 SFAPTISLPIFKGGYNVSYLNYTKAQKEYYVAVYEKAVQTAFQEVADALARKGTITDQLN 401 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ V + L+ + Y+ G + L+ L +R L A++ ++ Y Sbjct: 402 SQRNNVAASQTYYHLADLRYQNGVDTYLNALTAQRTLYTARTSLVSAEQAYYQNLNTFYK 461 Query: 445 AIGSG 449 +G G Sbjct: 462 VMGGG 466 >gi|152980891|ref|YP_001353625.1| fusaric acid resistance protein [Janthinobacterium sp. Marseille] gi|151280968|gb|ABR89378.1| fusaric acid resistance protein [Janthinobacterium sp. Marseille] Length = 498 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 89/419 (21%), Positives = 189/419 (45%), Gaps = 18/419 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----- 105 +WW ++ D L+ L+ AL + + A R+ A+ + P+ AS S Sbjct: 59 QWWHAYGDAQLDALIATALSDSPNLHIAEARVRQAQAYAGMAESATLPNVSASTSMTRQL 118 Query: 106 ---HRFIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 H FIP + + +++ + +DL+G+ R+ + ++L + + A+ +A+L + Sbjct: 119 FSAHDFIPPPEAGNYAWYNRVAVEATYDLDLWGRHRQELAAALDEVKVSSAESQMARLAL 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ SY+ I L +K +++ + G +++ + +LEA I + Sbjct: 179 ENNIVRSYVQLSLQFALKDITEDTLAHREKGLQVMRKRLAAGLATEMDVTQLEAAIPPLH 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I +++ + + ++ L G E + + + N ++ + +PADLI RP Sbjct: 239 IQIEQYDEAIIVLRNQLAALAGKGPAEG-EKITRPTLALDNNAWLRLPAVLPADLIGRRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTHWSFGPKLYLP 333 D+ + + + +I AK+ YP ++L I + N G ++ GP + LP Sbjct: 298 DVAARRWGVEAAGKQIEAAKAAFYPDINLMAFIGFQGIGFSNFLKGDSSIRGVGPAISLP 357 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G+++SN+ ++ ++ T+++A++ V N L ++ A+ Sbjct: 358 IFDGGRLRSNLGAHTAAYDIAVESYNGTLIHALESVANTLVVAQSLQQQKNLNDGALVTA 417 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 K+ +L+ + G L +L+ E A E + ++ +S+ L +A+G GY P Sbjct: 418 SKARTLASKGFAAGMTDFLVLLNSEVALLTQEQQRAQITARMLESHAALMLALGGGYQP 476 >gi|171316899|ref|ZP_02906108.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171097980|gb|EDT42798.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 520 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 102/462 (22%), Positives = 204/462 (44%), Gaps = 34/462 (7%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + I + D WW ++D L+ L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKIAQPAD--RADRGPWWTVYDDPQLDALIGKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------- 119 N TI Q+ A+ + RA FP+ + S + +T+++ Sbjct: 85 SNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRSRSGRTSTSSSASGFGSSSSIG 144 Query: 120 ------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 NSYSVGLDASWEPDLWGKVSRSVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDA 204 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Y +++L+ ++ QG ++ +++ + +++S ++ + H Sbjct: 205 LQKLLDDTVKSYGDSLKLTQNQYAQGVAARADVIQAQTQLQSAQAASIENGVARAQYEHA 264 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 I+TL+G PA+ F + QP + P+++ P+ L+ RPDI E++ A + +I Sbjct: 265 IATLIGEPASTF--SLPPNPLTAQPPI-TPVDV--PSALLERRPDIAAAERRAASANEQI 319 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G+A + +P+L+L+ + F W+ GP+L +FD G + A + Sbjct: 320 GVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTDAARA 379 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++ VL A ++VE+ L S + V + AV+ + ++++ Y+ G Sbjct: 380 TYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAVDSAEHALAIVTNQYKAGTV 439 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L++L + + L+ Q S V L A+G G++ Sbjct: 440 AYLNVLSAQTTAFTAQQKLATISGQRMVSSVGLVKALGGGWD 481 >gi|167035574|ref|YP_001670805.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida GB-1] gi|166862062|gb|ABZ00470.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida GB-1] Length = 509 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 89/460 (19%), Positives = 200/460 (43%), Gaps = 29/460 (6%) Query: 15 LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + P+ L T +I + + +WW ++ D L++ + +A+ Sbjct: 21 LSGCIGTWGIAPQSKTLQANTLTTDAAIREAATDAHWPDQQWWHAYGDPQLDRWIALAVA 80 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 + ++ A R+ AK ++ L + A++ P + G L Sbjct: 81 GSPSLAMAAARVREAKAMAGVVESAEKLQANGQATLKRHNWPEDQFYGPGALSGANTWDN 140 Query: 123 ------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKERI 174 + +DL+G+ R+ E ++ + A+ A+L + + ++ +YI + HF +R Sbjct: 141 NAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELQNNVVRAYIQLSLHFAQR- 199 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I L+ ++ + L+ + G + + + EA + + +L++ + + ++ Sbjct: 200 DIVKAELEQQEQILALAKRRLDAGIGTHFEVSQAEAPLPETHRQLDSLDEEIALTRNQLA 259 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G E +Q+ + L +P N+ PA+L+ RPD+ ++A I + Sbjct: 260 ALAGKGPGEGAQ-LQRPTLALAAPLKLPSNL--PAELVGQRPDVVASRWQVAAQARGIDV 316 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A + +P++ L GS+ P G +++ GP + LPIFD G+++S + A + Sbjct: 317 AHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPIFDGGRLRSELGVASA 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +TV+ A+K + + L K+ +V +K+ ++M+ +++G Sbjct: 377 GYDVAVARYNQTVIGALKNISDQLIRRESMKEQSHFAAESVAAAQKTYDIAMVAFQRGLT 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L+ + + + + ++ +L A+G G Sbjct: 437 DYLNVLNAQTLLFRQQQVQQQVQAARLVAHAELVTALGGG 476 >gi|320664005|gb|EFX31192.1| Multidrug efflux outer membrane protein EefC [Escherichia coli O157:H7 str. LSU-61] Length = 466 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 103/464 (22%), Positives = 220/464 (47%), Gaps = 29/464 (6%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPL---LPTQFSIGNS-----KNLINIDTLKWWESFNDT 59 +F+VLL AGC ++ P Y+ P P+ LP G + + +I+ L+ + +D Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHDWQQVIHDPRLQ--QVIHDP 64 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNS 116 L ++V IAL N + +A I++A+ A LFP+ A++S R + N T + Sbjct: 65 RLQQVVTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTET 123 Query: 117 TGQLD---SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T + D S + +DLFG+ + + + L S + + +L +I+++ +++ Sbjct: 124 TAEADGTVSSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADN 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A + + + ++++ + G + + + + + + + + + + + Sbjct: 183 SNLALAKETMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKN 242 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G E L +S Q +P G+ +D++ RPDI+ E L + A Sbjct: 243 ALNLLAGTTLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANAD 300 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +P++SL S + D + +H WSF P + LP+F G + +R A Sbjct: 301 IGAARANFFPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLFTGGSNLAQLRYA 359 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++TV A K+V NAL ++ + + V+ ++++ + + Y+ G Sbjct: 360 EAQKRGLIATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQTG 419 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +L +R+ + +L + + + L+ ++G G + Sbjct: 420 VGDYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGGMS 463 >gi|294339154|emb|CAZ87508.1| putative RND efflux system, outer membrane lipoprotein, NodT [Thiomonas sp. 3As] Length = 481 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 102/460 (22%), Positives = 214/460 (46%), Gaps = 30/460 (6%) Query: 11 FIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNS-----KNLINIDTLKWWESFNDTSLN 62 ++ LA C P P P+ LP ++ S + + WW F+D L Sbjct: 15 LVLTLAACAATP----PEAPVKIALPAGYAQAQSDWEPAQAMAAAPRGAWWSVFDDPVLA 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG---- 118 L Q N ++ + A+ + +A +P+ A S + G Sbjct: 71 GLETQVAQHNQSLAAQLAAYDQAQAAVAQAQAAYYPAVTAGASANRARTAGNGAVGNSLS 130 Query: 119 -QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L + W+ DL+G+ R +++ A ++ A + +L++ S L SY+ R +I + Sbjct: 131 ASLGASWEPDLWGKVRLQVQAGQATAAASAATLANTQLSLQSTLATSYLQLRTVDAQIVL 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-IST 235 A + Y++ ++++ ++ G + + ++ ++ + L + R+ + N I+ Sbjct: 191 AQNTVAAYQRALQITDNRYKAGVGTAADVASARTQLLQAQTSLTDLGVT-RVQLQNAIAV 249 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G P EF +++ P + + I GIPA L++ RPD+ + ++ + A+IG+A Sbjct: 250 LVGKPPAEF----SLSASDTLPEVPV-IPAGIPAQLLQRRPDLAAAQAQVQAANAQIGVA 304 Query: 296 KSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P+L+L GS A F + WS GP+L +FD G ++ ++ ++++ + Sbjct: 305 QTAWFPNLTLSAQGGSQAARIAELFSAPSLFWSIGPQLAATLFDGGLRRAQVQSSQAAYR 364 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++++VL A+++VE+ L + + + V+ + S+ L+ Y+ G L Sbjct: 365 QTVANYRQSVLTALQQVEDNLAAQRIPAQEAQQQAEVVQAAEVSLRLAENQYKAGTAPYL 424 Query: 413 DILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + AT+ L++ R+ A S V L A+G G+ Sbjct: 425 NVITAQTTATSARNAQLTLLNRRYAAS-VALIQALGGGWG 463 >gi|289668918|ref|ZP_06489993.1| outer membrane efflux protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 494 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 204/476 (42%), Gaps = 50/476 (10%) Query: 13 VLLAGCTVGPEYTKPHMP--------LLPT-------------QFSIGNSKNLINIDTLK 51 V LA C VGP + +P P LP QF+ G ++ T Sbjct: 15 VSLAACAVGPNFQRPAPPTADRYTANALPAATPAADVAHGGAQQFAPGQ-----DVPT-A 68 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASI 104 WW +F LN +V+ AL+ N + A + A++ + + R P +S Sbjct: 69 WWRAFGSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRD 128 Query: 105 SHRFIPNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 S P++ ++ T QL + +D+FG RR +E++ A + Q D A L++ + Sbjct: 129 SVVPAPDVGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTA 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + I + ++ A + L ++ L+ + T GA ++ + ++ Sbjct: 189 NVVNAAIGEAAARAQLDAARAQVALAEQLCTLTERQQTLGAIGTAQVLAQRTALAQAQAA 248 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P LEK + TLL + ++ L +P + + +P+ L+ +RP Sbjct: 249 VPPLEKQLELQ----RTLLAILGGQLPSDATDEAFTLA-TLQLPAQLPLSLPSQLVDHRP 303 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 DIR E + + A IG+A + PS++L+ + + F NT WS L P Sbjct: 304 DIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAVGNTQWSVAGSLLQP 363 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F +G + + AE+ + ++ VLNA EV NALT++ D + + A+ L Sbjct: 364 LFHRGALAHQQQAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRASADALALA 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++++++ G + D+L ++A + A+ V LY A+G G Sbjct: 424 ERTLAVVQRQQVVGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 479 >gi|289665967|ref|ZP_06487548.1| outer membrane efflux protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 494 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 203/476 (42%), Gaps = 50/476 (10%) Query: 13 VLLAGCTVGPEYTKPHMPL--------LPT-------------QFSIGNSKNLINIDTLK 51 V LA C VGP + +P P LP QF+ G ++ T Sbjct: 15 VSLAACAVGPNFQRPAPPTADRYTANALPAATPAADVAHGGAQQFAPGQ-----DVPT-A 68 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASI 104 WW +F LN +V+ AL+ N + A + A++ + + R P +S Sbjct: 69 WWRAFGSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRD 128 Query: 105 SHRFIPNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 S P++ ++ T QL + +D+FG RR +E++ A + Q D A L++ + Sbjct: 129 SVVPAPDVGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTA 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + I + ++ A + L ++ L+ + T GA ++ + ++ Sbjct: 189 NVVNAAIGEAAARAQLDAARAQVALAEQLCTLTERQQTLGAIGTAQVLAQRTALAQAQAA 248 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P LEK + TLL + ++ L +P + + +P+ L+ +RP Sbjct: 249 VPPLEKQLELQ----RTLLAILGGQLPSDATDEAFTLA-TLQLPAQLPLSLPSQLVDHRP 303 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 DIR E + + A IG+A + PS++L+ + + F NT WS L P Sbjct: 304 DIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAAGNTQWSVAGSLLQP 363 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F G + + AE+ + ++ VLNA EV NALT++ D + + A+ L Sbjct: 364 LFHGGALAHQQQAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDARSLRASADALVLA 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++++++ G + D+L ++A + A+ V LY A+G G Sbjct: 424 ERTLAVVQREQVVGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 479 >gi|319794956|ref|YP_004156596.1| rnd efflux system, outer membrane lipoprotein, nodt family [Variovorax paradoxus EPS] gi|315597419|gb|ADU38485.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus EPS] Length = 476 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 101/453 (22%), Positives = 202/453 (44%), Gaps = 26/453 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LAGC V + + + N +D +WW T L+ L+ A +N Sbjct: 23 LAGCAVPGDPPPHAVAPPASWQRAQPDANASPVDA-RWWSQLGSTELDTLIAQAQARNQD 81 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----------- 123 + A R++ A+ A P ++ + + + GQ D Sbjct: 82 LAMALARVDGARAQARIAGAQRLPE----LTGQIDTSRQGRMGGQAAVDGNAHAIGFAAR 137 Query: 124 WKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DL+G++ H E+ L ++ + D +L+V +++ S++ +ER++IA L Sbjct: 138 YELDLWGRQGALHREAQ-QGLRASVFERDAVQLSVTAEVASSWLQMVGLRERVAIACSNL 196 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + ++ + L + GA + L L + + E ++ L++ R ++ LLG P Sbjct: 197 ENAQRVLRLVESRGRAGAATPLDLAQQRGLAATRERELARLQQQARHAETALALLLGLP- 255 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E + + PI+ G+P+ L+ RPD+ E +LA + A + A++ + P Sbjct: 256 -EPTATSAAERTRLEALRISPISAGLPSQLLVRRPDLTQAEARLAAADANVRAARAAMLP 314 Query: 302 SLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++L S+ L + + N +S L PIFD G++ A + +E ++ Sbjct: 315 RVTLTASVGLQGQAAGGLFDNPIYSLAAGLAAPIFDGGRLAGERDLAVARREELLGAYRA 374 Query: 361 TVLNAIKEVENALTSI-NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++ A + + AL ++ D + +++ ++ +++ LS + YR G +LL +LD +R Sbjct: 375 AIIGAFADAQTALDAVAGSDAQASAQVEELLQ-ARRAAELSELRYRAGAETLLVLLDAQR 433 Query: 420 ATAKVEVDLSIAKRQ-LAKSYVDLYIAIGSGYN 451 + DL + RQ ++ V LY A+G G+ Sbjct: 434 VLYSAQ-DLDVQLRQGRLQARVALYRALGGGWR 465 >gi|313108998|ref|ZP_07794972.1| hypothetical protein PA39016_001650011 [Pseudomonas aeruginosa 39016] gi|310881474|gb|EFQ40068.1| hypothetical protein PA39016_001650011 [Pseudomonas aeruginosa 39016] Length = 536 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 99/383 (25%), Positives = 172/383 (44%), Gaps = 33/383 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFS---------IGNSKNLINIDTLKWWESFNDTSLN 62 ++LLA C+ P P +P FS +S+ + +D WW ++ D LN Sbjct: 86 LLLLAACSHAPHSADPPRLDVPAHFSNEEGGEGILDKSSRRTLPVD---WWTAYGDPHLN 142 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTG 118 LV+ AL++N + A R++ A RA L PS + A+ + N+ + G Sbjct: 143 ALVRAALERNTELTIARARVDEASAATRRARASLLPSLSAGTQATRGRDYSENVAIGNDG 202 Query: 119 Q--LDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIA-KLNVISKLIPSYIDARHFKERI 174 + L + W+ DL G R + A LD+ A Q +A + V + + + + R E Sbjct: 203 RATLSASWEADLSG-RLSQAAEGARLDAVAAEQAWVATRWQVAFETVSAAVQQRQASELE 261 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A L ++ + L KF G + + + A + ++ + L ++ H + Sbjct: 262 ALAAARLASAERLVLLMQRKFEAGQATGFDIERTRAGVVALRVEQEQLRRARGEATHALD 321 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L+G P ++ +L +P IPADL+ RPD+R E K A A+ Sbjct: 322 VLVGQTPGA-------PAASPTLASLAVPDWTPTRIPADLLSERPDVRAAEAKFAAETAR 374 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAES 349 A+ + +P L L+ S S T +S G + LPIFD G I++ I E+ Sbjct: 375 WNAAEGERFPRLVLDLSGGRQRVESVGTRITGNIFSLGAGVSLPIFDGGAIRAGIETGEA 434 Query: 350 SAQEQYITWQETVLNAIKEVENA 372 ++ ++ T+L+A+++VENA Sbjct: 435 RSRAARAEFERTLLSALQDVENA 457 >gi|253997658|ref|YP_003049722.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera mobilis JLW8] gi|253984337|gb|ACT49195.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera mobilis JLW8] Length = 480 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 111/482 (23%), Positives = 224/482 (46%), Gaps = 50/482 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 A+ + + C++ TK LP QF+ ++++ N + W + F+D L L+ Sbjct: 11 AVAGALALSMQACSIPLLTTKKADTKLPEQFNNQSAQSSENTANVNWKDFFDDAYLPALI 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP-SSYASISH-----RF----------- 108 A+ N + +RI+ AK I + R + P S+ + + RF Sbjct: 71 DTAIANNKEVNIMAQRISMAKNEIQARRGEYLPFVSFGAGAEVEKVGRFTRNGAVEESLE 130 Query: 109 ------IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 P+ N L S W++D++ + R+ + +A ++ Y K +++ L+ Sbjct: 131 IKEGKAFPDPLPNYQFGLYSSWELDVWKKLRNA-TKVAGME--YMASIEGKNFLVTNLVA 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSH--LKFTQ-----GATSKLSLVKLEAEIKSI 215 +A + E I++ +Q LD ++NI++ L+ T+ T+ L++ + EAE+K Sbjct: 188 EIANA--YYELIALDNQ-LDNLEQNIKIQQNALEVTKELKKYARTTSLAVKRFEAEVKKN 244 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF---QPNLYIPINIGIPADLI 272 +S +++ + I+ LLG +Q+ S F +P + + G+PA L+ Sbjct: 245 QSRQYVIKQQQVELENRINFLLGRTP----QPIQRASAGFMDIKPKM---VQAGVPAQLL 297 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGP 328 NRPDIR E +LA + I +AK++ YPS ++ + N NT ++ Sbjct: 298 ENRPDIRKAELELAAADLNIQVAKANFYPSFAIRAGVGFQAFNPRYLLNTPESLMYTLAG 357 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + P+ ++ I + + A ++ + +++T++NA EV N L++I+ +K Sbjct: 358 DMMAPLVNRNAITAVYKNANATQIQAAYDYEKTIINAYGEVANQLSNIDNLEKNYQLKTT 417 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V+ +S+ ++ ++ R L+IL +R + + +L K++ + V+LY A+G Sbjct: 418 QVQALTESVDVANQLFKSARAEYLEILLTQREALEAKSELIETKQKQISAMVNLYRALGG 477 Query: 449 GY 450 G+ Sbjct: 478 GW 479 >gi|87307691|ref|ZP_01089835.1| probable outer membrane lipoprotein IbeB [Blastopirellula marina DSM 3645] gi|87289861|gb|EAQ81751.1| probable outer membrane lipoprotein IbeB [Blastopirellula marina DSM 3645] Length = 606 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 96/472 (20%), Positives = 206/472 (43%), Gaps = 53/472 (11%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC++ P++P F+ + N + E F+D +L +L+ + L N + Sbjct: 33 SGCSIPCLRRAEQGPIMPPDFT--GRTDAENSAHMGIVEFFDDPTLAELLTVGLVNNQEL 90 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRF-----------------------IPNL 112 + I A IL+ R P A +S P+ Sbjct: 91 KIRNQEIQIANNEILARRGAYLPFITAGLSGGMERTSKFTPLGAAEEQLTYPVGGKFPDP 150 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 TN+ + W++D++ + R+ +S++ A + ++++ SY + Sbjct: 151 LTNTRISANLFWELDIWRKLRNARDSAMQRYIEAIEARNYFVTQLVAETAKSYYELAALD 210 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +R+ +Q + L ++++E++ + ++L + + AE++ ES + +++ + Sbjct: 211 KRLVFLNQTIQLQQQSLEVAQAQKDAARGTELGVQRFLAEVRKNESQLLIVKQDIIEVEN 270 Query: 232 NISTLLG-YPAT---EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 I+ L+G YP + ++ SN Q +G+PA L+RNR DI E+++A Sbjct: 271 RINFLVGRYPQPVDRQAWDFISLDSNMLQ--------VGVPAQLLRNRRDIIAAEREVAA 322 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL---------PIFDKG 338 S I +A+++ YP ++++ + F +N + F P ++ P+ +K Sbjct: 323 SGLDIMVARANFYPRVAISAGVG------FEAFNPRYLFDPGAFIANAMGDLVAPLINKK 376 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 I+++ A + + +Q T+LNA EV N++ + + V Q V ++S++ Sbjct: 377 AIQADYMNANARQLQAVYNYQRTILNAFTEVVNSMAKVENYRDSVALKQQQVRALEESVN 436 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++ R +D+L +R + L K+Q + V Y A+G G+ Sbjct: 437 VATNLFQGARAEYVDVLFSQRDLLEARTALIETKQQQLSAIVSAYQALGGGF 488 >gi|304320199|ref|YP_003853842.1| outer membrane efflux family protein [Parvularcula bermudensis HTCC2503] gi|303299102|gb|ADM08701.1| outer membrane efflux family protein [Parvularcula bermudensis HTCC2503] Length = 405 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 24/398 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWES-F 56 M L AI +F+ L A +VGP+ + +F G+ + K WW++ F Sbjct: 1 MKKLGAI--IFLFLPACASVGPDLSTAPAESWQGEFYYGDDSAYTSDAPAKIAPWWQAAF 58 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 +D LN+LV +A N I A R+ A+ + R L P S S+ Sbjct: 59 DDDRLNRLVVLADNNNRDIGAALYRVEEAEARLSRARRALLPQGSGSESYSRTNEFMQGQ 118 Query: 117 TGQ----------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQ D W++D+FG+ RR + + A A + V + +Y Sbjct: 119 GGQRQETDVYTLSADLQWELDVFGRIRRQRDIARAGAAERLALYEDVMRVVHAGTAQAYF 178 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + R ++A Q L L ++ + L+ GA+ + + + + E+ + L + Sbjct: 179 NWLEADRRRAVAQQNLGLQEEALRLTQELVNLGASPRFDYDRQLTQARLTEAALVQLTAA 238 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ----PNLYIPINIGIPADLIRNRPDIRYQ 281 + ++ L G E + + S + P++ + I PA +IR RPDI Sbjct: 239 RADALSALALLCGVTVPELVGLFPEFSGDSGTIDVPDMTPTLGIPNPAVVIRQRPDIASA 298 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKG 338 E + A ++ +IG+A+++L+P L+ +GS++ T Y+ +S+GP+L +F Sbjct: 299 EAQYAQALYQIGVAQAELFPQLTFSGSVSQTAFEPEALYDQESFGFSYGPRLNWNVFSFP 358 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 ++ + + +A + ++ TVLNA+ E ++AL + Sbjct: 359 QLLAEVDATGKAAGAAKMAYENTVLNALTETDSALAQL 396 >gi|148549662|ref|YP_001269764.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida F1] gi|148513720|gb|ABQ80580.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida F1] Length = 509 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 93/475 (19%), Positives = 206/475 (43%), Gaps = 30/475 (6%) Query: 1 MNILRAIFSLFIVL-LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 + L+A + + L L+GC + P+ L T +I + + +WW + Sbjct: 6 IRTLKAFSACALALTLSGCIGTWGIAPQSKTLQANTLTTDAAIREAATDAHWPDQQWWHA 65 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLK 113 + D L++ V +A+ + ++ A R+ AK ++ L + A++ P + Sbjct: 66 YGDPQLDRWVTLAVAGSPSLAMAAARVREAKAMAGVVESAEKLQANGQATLKRHNWPEDQ 125 Query: 114 TNSTGQLDS------------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 G L + +DL+G+ R+ E ++ + A+ A+L + + + Sbjct: 126 FYGPGALSGANTWDNNAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELQNNV 185 Query: 161 IPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI + HF +R I L+ ++ + L+ + G + + + EA + + Sbjct: 186 VRAYIQLSLHFAQR-DIVKAELEQQEQILALAKRRLDAGIGTHFEVSQAEAPLPETHRQL 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 +L++ + + ++ L G E +Q+ L +P N+ PA+L+ RPD+ Sbjct: 245 DSLDEEIALTRNQLAALAGKGPGEGAQ-LQRPVLALAAPLKLPSNL--PAELVGQRPDVV 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPI 334 ++A I +A + +P++ L GS+ P G +++ GP + LPI Sbjct: 302 ASRWQVAAQARGIDVAHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPI 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+++S + A + + +TV+ A+K + + L K+ +V + Sbjct: 362 FDGGRLRSELGVASAGYDVAVARYNQTVVGALKNISDQLIRRESMKEQSHFAAESVAAAQ 421 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K+ ++M+ +++G L++L+ + + + + ++ +L A+G G Sbjct: 422 KTYDIAMVAFQRGLTDYLNVLNAQTLLFRQQQVQQQVQAARLIAHAELVTALGGG 476 >gi|54293260|ref|YP_125675.1| hypothetical protein lpl0308 [Legionella pneumophila str. Lens] gi|53753092|emb|CAH14539.1| hypothetical protein lpl0308 [Legionella pneumophila str. Lens] Length = 448 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 113/464 (24%), Positives = 210/464 (45%), Gaps = 41/464 (8%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI K D L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSIQTEKAAYLPD-LHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLQQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLAAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ HNI Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSRIQRIEAQIKVVQ-------HNIVV--- 232 Query: 239 YPATEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LH++ ++ N N IP N +PA ++ RPDI E L + Sbjct: 233 --TKNALHFLFNENPGDVQIKALFENIDSNQLIPGN--LPASVLSVRPDIHEAEALLKAA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKSNIRR 346 A +G ++L P ++L G+ N ++ GP + LP+F + + Sbjct: 289 HADVGAITANLLPGINL-GAFLGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVDV 341 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR Sbjct: 342 SKARYKAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALSDEKQQCHLAEVRYRH 401 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G L+++ + + ++ ++ K + S V LY +G GY Sbjct: 402 GIDDYLNLIKCQILLDEFKLVINQNKLEKLLSIVTLYQDLGGGY 445 >gi|296535561|ref|ZP_06897742.1| RND efflux system, outer membrane lipoprotein, NodT [Roseomonas cervicalis ATCC 49957] gi|296264077|gb|EFH10521.1| RND efflux system, outer membrane lipoprotein, NodT [Roseomonas cervicalis ATCC 49957] Length = 514 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 105/482 (21%), Positives = 197/482 (40%), Gaps = 55/482 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID---------------TLKWWESF 56 + +LAGC VGP++ +P P + + N + D +WW +F Sbjct: 40 LAVLAGCAVGPDFERPAAPEATGYMAAPMAANTASADGPGGAVQRLVPGAPVAAEWWRAF 99 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-----RFIPN 111 L+ LV AL N + A + ++ + R +P+ AS+ IP Sbjct: 100 GAPELDDLVAAALANNAELAAARATLRQSEALSAAGRGGFWPTLGASLQSARQKAEPIPA 159 Query: 112 LKTNS--------TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 TG+++ + D+FG RR +E +A D +++ A L V L Sbjct: 160 GDAPGGLPPYSLHTGRVEVSYAPDVFGGTRREVEELVAEADRQRFELEAAALTVAGNLAS 219 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + I + I +++ + ++ L + GA ++ ++ EAE+ +D+P L Sbjct: 220 AVIQEAALRAEIQATAEVIAASEDSLRLLRRRAALGAAAQSEVLLQEAEVAQRRADLPAL 279 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----------INIGIPADLI 272 K+ I+ L G QP L +P + + +P++L+ Sbjct: 280 LKAAGEQRTLIAVLTGR-------------TTDQPPLPLPSLEALRLPDTLPVRLPSELV 326 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPK 329 R RPDI E L + A+IG+A +++ P L+L S + WS Sbjct: 327 RQRPDILSAEAALRAANARIGVATANMLPQLTLTASYGTARAPGVDAFTPQGLIWSVAAG 386 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+F G++ A ++ ++ VL + K V +AL ++ D + + + A Sbjct: 387 LTQPLFQGGRLARQRDAAVAARDAAAAQYRGVVLRSFKNVADALRALELDAETLRAQREA 446 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +S+ ++ R G + L++L ++A A+ + A+ V L+ A+G G Sbjct: 447 ARVAAQSLEIARRQQRLGSITTLEVLTAQQADARARIAAIRAQAARYVDTVALFTALGGG 506 Query: 450 YN 451 + Sbjct: 507 FG 508 >gi|325286522|ref|YP_004262312.1| RND efflux system, outer membrane lipoprotein, NodT family [Cellulophaga lytica DSM 7489] gi|324321976|gb|ADY29441.1| RND efflux system, outer membrane lipoprotein, NodT family [Cellulophaga lytica DSM 7489] Length = 485 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 95/453 (20%), Positives = 206/453 (45%), Gaps = 43/453 (9%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 +PT ++ + + +N +KW + F+D L ++ AL N + + + AK I+ Sbjct: 43 VPTVYN-NATTDTVNSAVMKWDQYFSDPHLKAIIDTALVNNQELNIMLQEVQVAKNEIMV 101 Query: 92 VRADLFPSSYASISHRFIPNLKTNSTGQLDSD-----------------------WKIDL 128 + + P + S G D++ W++D+ Sbjct: 102 RKGEYLPFVNIQAGAEVEKVGRYTSQGANDANTDIKEGEEFPEPLPNYQVAAVASWELDV 161 Query: 129 FGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 + + R+ + + L L S + + N++S++ SY + ++ I Q + + K Sbjct: 162 WKKLRNSKKAAVLEYLASEEGK-NFMVTNLVSEIASSYYELLALDNQLKIIDQNIAIQKN 220 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFL 245 +E+ L+ ++L + + EAE+ +S +++ + I L+G YP Sbjct: 221 VLEIVKLQKQAARATELGVKRFEAEVLKNQSSRYQIQQQITEAENKICFLMGSYP----- 275 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 ++++ + +F P++ GIP+ L++NRPDI+ E +LA + I +AK++ YPS+ + Sbjct: 276 KHIKRTTTDFVEITTTPVHAGIPSQLLQNRPDIKRAEYELAANKLNIKVAKANFYPSIGI 335 Query: 306 NGSIALTHDNSF-PGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 + L +F P + T ++ + P+ ++ IK+ + A + + Sbjct: 336 KAGVGL---EAFKPKFLTKTPESVLYNVVGDVIAPLINRNAIKAAYKNANKRQIKAVYEY 392 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ +LN E N L++I KK Q V +S+++S +R R +++L + Sbjct: 393 EKAILNGYIETTNQLSNIKNLKKSFDVKQQEVNALTESIAISNKLFRSARADYMEVLLTQ 452 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + +++L K++ ++V++Y A+G G+N Sbjct: 453 RDALEAKIELVETKKEQLLAHVNIYHALGGGWN 485 >gi|255599200|ref|XP_002537175.1| Fusaric acid resistance protein fusA precursor, putative [Ricinus communis] gi|223517231|gb|EEF25208.1| Fusaric acid resistance protein fusA precursor, putative [Ricinus communis] Length = 450 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 42/428 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----- 105 +WWE+ +D LN+LV AL N T+ R+ A+ R+ P AS S Sbjct: 30 RWWEALHDEQLNRLVNAALSDNPTLRATLARVRQAEALAGVARSATLPRVDASASADREL 89 Query: 106 ---HRFIP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 H IP N +T L + +DL+G+ R + +++ + A A+ +A+L + Sbjct: 90 YSAHSTIPAPLAGNYAWKNTATLSGSYDLDLWGRNRDALAAAVDEVRLAAAESQMARLTL 149 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH--LKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI ++S+ + + D +N+ L+ T+ K + + + ++ S Sbjct: 150 ETSIVRTYI-------QLSLEYALQDSVAENLAQRQRILEITR--RRKAAGLASDIDVTS 200 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG------IP 268 IE+ +P + + I+ L A +P L + G +P Sbjct: 201 IETTLPAGRREQEQHGEAIALLRNQLAALIGKGPGDGDTIARPTLALAQGHGAAVPSTLP 260 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWS 325 A L+ RPDI Q ++ + A++ AK D YP+++L G +L + Sbjct: 261 AKLVGRRPDIVAQRWRVEAAGARVDAAKKDFYPNINLAAFAGMQSLGFGHFLDAGARTRG 320 Query: 326 FGPKLYLPIFDKGKIKSNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 P + LP+FD G+++S + + A EQY TV+ A+ +V NA+ I K+ Sbjct: 321 ITPAVSLPVFDGGRLRSQLGGQTAVYDGAIEQY---NATVVQAMSDVANAVVRIASVKEQ 377 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS-IAKRQLAKSYVD 441 Q A+E ++ LS YR G L++++ + + ++ +A R+L +Y Sbjct: 378 DQLAQRALESARRQQHLSEQAYRAGLTDTLNVINAQLTLLNEQQQMAQVASREL-DNYAL 436 Query: 442 LYIAIGSG 449 L A+G G Sbjct: 437 LMSALGGG 444 >gi|300772559|ref|ZP_07082429.1| ND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33861] gi|300760862|gb|EFK57688.1| ND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33861] Length = 470 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 99/462 (21%), Positives = 213/462 (46%), Gaps = 34/462 (7%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQ 70 VLL+ C VG Y++P + P + + + DT L W F D L L++ AL+ Sbjct: 16 VLLSSCAVGKPYSRPDLAT-PENY---REQVQVTGDTVLLPWKTFFKDPDLVILIEQALE 71 Query: 71 QNLTILQATERINAAKENILSVRADLFP----------------SSYASISHRFIPNLKT 114 +N I A + + + L P S S+S +F Sbjct: 72 KNKDISVAMLNLQQLDLSYKQAKRGLLPTLNLAVGASRVYQSRNSLNGSLSEQFTGEKYM 131 Query: 115 NS-TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + L + W+ D++G+ R E++ AN + K +I ++ +Y + E Sbjct: 132 DDFSATLTASWEADIWGKVRMQKEAARANYLMQQENLTALKTRIIVQVAQAYYNLITLDE 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ IA + L + +++ L+F + L + + EA+ K+ E +P +++ + + Sbjct: 192 QLKIAANNIKLSDETLQMIRLQFQSAQVNSLGVEQAEAQKKTAELLVPLAKQNIAIQENA 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +S L G ++ +F+ N +G+PA L+ RPD++ E + + A + Sbjct: 252 LSILCGAYPGRIDCSAGLETYSFEENF----PVGVPALLLSRRPDLKVAEYAVVVANANV 307 Query: 293 GIAKSDLYPSLSLNGSI---ALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 G+ K +YPS+SL S+ + +N F PG + + PIF K ++++N +A Sbjct: 308 GLNKVAMYPSISLTPSVGANSFKFNNWFDLPGSLVK-NIAGNITQPIFQKKELQTNYEQA 366 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q+ ++++V+NA+ EV +A+ + + ++ +K+++ +++ Y+ G Sbjct: 367 KIEQQKTAEQFRQSVMNAVAEVSDAMAKTQYTSERIGLVKQRKASLEKAVNDALLLYKSG 426 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L+++ + + + +++ +++ + +LY A+G G Sbjct: 427 MATYLEVITAQNNSLQNDLEAINIQKEKYDAVTELYRALGGG 468 >gi|295691264|ref|YP_003594957.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295433167|gb|ADG12339.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 458 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 180/412 (43%), Gaps = 24/412 (5%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFI 109 W++F D L++LV AL N + A R+ A+ A L PS R + Sbjct: 54 WKAFGDPRLSELVAAALAYNADLGAAEARVREAEAQSRLAGAALLPSVNLGAGVQKERDL 113 Query: 110 -----PNLKTNSTGQLDSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKLNVISKLIPS 163 P+ + Q+ +++DL+G+ R +++ A+L ++ D A+L+V + + S Sbjct: 114 NAFGQPSTTLAAQPQVQVAYEVDLWGRLRAADAAGRASLQASRDARDAARLSVAAAVARS 173 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ +++ A L ++ + + +G TS L L + E E+++ +P LE Sbjct: 174 YVALLSLDAQLATAQGTLASRQEAAARARRRAREGVTSDLELRQAEGELEAAAQRVPALE 233 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQE 282 + R ++ L+G Q L IP + +P+ L+ RPDI E Sbjct: 234 LAIRRQEGALALLVG-------QTSQAIPRGTLARLVIPQPSAPLPSSLLNRRPDIAQAE 286 Query: 283 KKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 LA S A + A++ P + L G +++ H ++ T W+ G PIFD G+ Sbjct: 287 ATLAASDASLAAARAAFLPQVRLSAAGGVLSVQHVDTL----TVWTLGASALAPIFDGGR 342 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ A + + +++ VL A EVE+AL + ++ Sbjct: 343 LRAQSDAATARRDQAAFGYRKAVLTAFSEVESALEGTGRLAEQEAAAVRQRAAAASALDH 402 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y+ G + L+ LD +R ++ LS + ++ V LY A+G G+ Sbjct: 403 ARKRYQAGYVAYLEELDAQRGLLATDLALSQVREARLQNAVALYQALGGGWT 454 >gi|167764081|ref|ZP_02436208.1| hypothetical protein BACSTE_02464 [Bacteroides stercoris ATCC 43183] gi|167698197|gb|EDS14776.1| hypothetical protein BACSTE_02464 [Bacteroides stercoris ATCC 43183] Length = 459 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 107/463 (23%), Positives = 191/463 (41%), Gaps = 31/463 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTS 60 I LL+ C + Y +P L + G++ + N L W E F D Sbjct: 6 ILMCATALLSSCHIYKSYDRPEDITVEGLYRDTIAGGDTLAADTANFGNLPWKEVFTDAQ 65 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNS 116 L L++ AL N + A + A+ ++S R P S ++S Sbjct: 66 LQTLIEQALTNNADLRSAALTVKQAQAALMSARLAYAPMLALSPQGTVSSFDKGKATQTY 125 Query: 117 TGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + + W+IDLFGQ +R + SL Y Q + VI+ + Y Sbjct: 126 SLPVTASWQIDLFGQLLNPKRKAQVSLKQTQF-YEQA--VQTQVIANVANMYYTLLMLDR 182 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ I+ D+ K+N+E + ++ + + + +P + +S R + Sbjct: 183 QLQISESTCDILKRNLETVEAMKEAAMANSAAVEQSRTAYAQVLASLPDIRQSIRETENA 242 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + +L PA +Q L + GIP L+ NRPD++ E LA S Sbjct: 243 LCLMLNQPAQSIARGTLEQQQ-----LPAEFSTGIPLQLLSNRPDVKAAEMSLAASYYDT 297 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A++ YP ++L+GS T+ PG + G L P+F +G + +++A+ Sbjct: 298 NSARAAFYPQITLSGSAGWTNSAGSAIINPGKLLASAIG-SLTQPLFYRGANIARLKQAK 356 Query: 349 SSAQEQYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + ++ I +Q T+L A EV NAL + DK I ++Q V +K+ + + Sbjct: 357 AQEEQAKIQFQTTLLKAGNEVSNALYQYQMTSDKAISREIQ--VNSARKAAEDTKELFNL 414 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G + L++L E++ ++ +S + LY A+G G Sbjct: 415 GTSTYLEVLSAEQSYLSAQLSEVADTFDRMQSVISLYQALGGG 457 >gi|330950379|gb|EGH50639.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 468 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 35/465 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSQWLPATAAQPAASGSVPTD-IEWQNFFIDNRLVRLQNL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKSSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQKSYDLTRNSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G E L + Q + + G+P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVGSDLPEELLPDADMQSVAQ---LVQVPDGLPSSLLQRRPDVLSAEHTLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGANRATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ YR Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALYRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 423 GSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 467 >gi|66046097|ref|YP_235938.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63256804|gb|AAY37900.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 468 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 35/465 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSQWLPGTAGQPAASGSVPTD-IEWQNFFIDNRLVRLQTL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKPSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQKSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G ++ + ++ + + G+P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVG---SDLPEELLPNADTQSVAQLVQVPDGLPSSLLQRRPDVLSAEHTLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGANRATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ YR Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALYRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 423 GSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 467 >gi|313497942|gb|ADR59308.1| RND efflux transporter [Pseudomonas putida BIRD-1] Length = 444 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 98/421 (23%), Positives = 197/421 (46%), Gaps = 26/421 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F L++L++IA + + A R+ A+ + A L P + Sbjct: 24 RWWQAFASPELDQLIEIARNNSHDLAAAAARVRQAQARAVIAGAPLLPEVQFGLDASRQR 83 Query: 111 NLKTNSTGQLDSD----------------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAK 153 L+ QLD+ ++ID +G R +S+L +LD++ K Sbjct: 84 LLRGEGNDQLDASSSERTSTSFDANLSASYEIDFWGGLRSARDSALRSLDASRLDRQTVK 143 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + + +Y+ + KE++ IA L + + L + G++++L L + + + Sbjct: 144 LTLFGSVADTYLQSLALKEQLRIAQLNLRNAQAVLSLVEARQQSGSSTQLELAQQRSLVA 203 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P LE+ ++ ++TLLG P + + + F + I G+P++L+ Sbjct: 204 AQQRQLPLLEQQWQDTQVTLATLLGLP----VQQLPTSTAAFADLRWPRIASGVPSELLA 259 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPDI E +LA + A + +A++ L P L+L GS A T F + +++ L Sbjct: 260 RRPDIAAAEARLAAASANVQVARAALLPKLTLGVEFGSGASTFAQIFD--SPYYTLTSGL 317 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F++G++++ + AE+ +E ++ ++L A +VE AL + + V Sbjct: 318 VAPVFNRGRLRAAQQLAEAEQEELLEAYRTSILAAFADVEKALNATQGVDRQRQWQDQEV 377 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + + L+ YR G +LL +LD +R+ + + + + ++ V LY A+G G+ Sbjct: 378 EQSRIAFQLAERRYRAGAETLLTVLDTQRSLYQAQDQQARLQLSQLQASVALYKALGGGW 437 Query: 451 N 451 Sbjct: 438 Q 438 >gi|289662947|ref|ZP_06484528.1| outer membrane efflux protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 505 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 90/417 (21%), Positives = 188/417 (45%), Gaps = 19/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP- 110 WW + D L+ L+ LQ + ++ A R++ A+ I + +A+ PS S + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLAAADARLHQAQARIDTAQANRGPSLSVSGGYTGLQL 133 Query: 111 ---------NLKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 K + QL D++ +DL+G +R E+++ +A A+LN+ S Sbjct: 134 PESMVGEELGGKYGGSAQLALDFRYGVDLWGGKRGAWEAAVDQAHAAEVDAHAARLNLSS 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + +A+ L+ +K +EL+ + + G S+L + + +A + + + Sbjct: 194 AIAEGYAQLAYAWSLHDLANDELNRAQKLLELTRQRRSAGIDSELQVRQAQARVPAAQQQ 253 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + ++ ++ L+G L + + + +PADL+ RPD+ Sbjct: 254 VQSAQQQIDEARTALAALVGQGPDRGLDIARP---VLGAGIATQLPSMLPADLLGRRPDV 310 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIF 335 ++ + I +AK+ YPSL+L + + + + FG P L LPIF Sbjct: 311 VAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLESGSVFGLVAPALSLPIF 370 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D GK+++N+ +++ + + V+ A++EV + +T++ ++ AV+ + Sbjct: 371 DGGKLRANLAGSDAQYDLAVADYNQKVIAALREVADQVTAVRSLEQRAQAQNDAVQTATE 430 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S L++L ++ ++ + Q + V L A+G G+ P Sbjct: 431 AFDLAQQRYRAGIGSYLEVLSVQEQLLVARQRMAGLQSQQLLASVRLQRALGGGFTP 487 >gi|26990903|ref|NP_746328.1| RND efflux transporter [Pseudomonas putida KT2440] gi|24985918|gb|AAN69792.1|AE016615_8 ABC export system, outer membrane protein [Pseudomonas putida KT2440] Length = 470 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 98/421 (23%), Positives = 197/421 (46%), Gaps = 26/421 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F L++L++IA + + A R+ A+ + A L P + Sbjct: 50 RWWKAFASPELDQLIEIARNNSHDLAAAAARVRQAQARAVIAGAPLLPEVQFGLDASRQR 109 Query: 111 NLKTNSTGQLDSD----------------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAK 153 L+ QLD+ ++ID +G R +S+L +LD++ K Sbjct: 110 LLRGEGNDQLDASSSERTSTSFDANLSASYEIDFWGGLRSARDSALRSLDASRLDRQTVK 169 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + + +Y+ + KE++ IA L + + L + G++++L L + + + Sbjct: 170 LTLFGSVADTYLQSLALKEQLRIAQLNLRNAQAVLSLVEARQQSGSSTQLELAQQRSLVA 229 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + +P LE+ ++ ++TLLG P + + + F + I G+P++L+ Sbjct: 230 AQQRQLPLLEQQWQDTQVTLATLLGLP----VQQLPTSTAAFADLRWPRIASGVPSELLA 285 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 RPDI E +LA + A + +A++ L P L+L GS A T F + +++ L Sbjct: 286 RRPDIAAAEARLAAASANVQVARAALLPKLTLGVEFGSGASTFAQIFD--SPYYTLTSGL 343 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F++G++++ + AE+ +E ++ ++L A +VE AL + + V Sbjct: 344 VAPVFNRGRLRAAQQLAEAEQEELLEAYRTSILAAFADVEKALNATQGVDRQRQWQDQEV 403 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + + L+ YR G +LL +LD +R+ + + + + ++ V LY A+G G+ Sbjct: 404 EQSRIAFQLAERRYRAGAETLLTVLDTQRSLYQAQDQQARLQLSQLQASVALYKALGGGW 463 Query: 451 N 451 Sbjct: 464 Q 464 >gi|317406891|gb|EFV86968.1| outer membrane exporter protein [Achromobacter xylosoxidans C54] Length = 333 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 33/319 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE----------------NILSVRA 94 +WW F +L+ LV+ AL + T+ QA R+ A E N+ + R Sbjct: 4 QWWRLFRSAALDALVRQALDASPTLEQARARLRQAGEDLNAETGGRLLPAVDANLSATRQ 63 Query: 95 DLFPSSYA-SISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIA 152 + PS+Y ++ + P N++ +D + +D+FG RR +E A +D ++ A Sbjct: 64 KVDPSAYGVPVAEQPAPFTLYNAS--IDVSYTLDVFGGNRRALEGLAAQVDYQSHELQAA 121 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ + + ++ + I R++ ++L ++ ++ + G ++ L E + Sbjct: 122 RMTLAANVVTTAIRQADLAGRLADTRELLLAQQRQRDIMAQRLRAGGIAEADLRNQELLL 181 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINI--GIPA 269 E+ +P LE H ++T LG P + Q+ + +L +P I G+P+ Sbjct: 182 AQTEASVPPLEYQLAQAHHQLATYLGQPPAAW------QAPPLRLADLTLPAEIPTGVPS 235 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 L R RPDI E L + A+IG+A ++ YP +L GS + G N W+ Sbjct: 236 ALTRQRPDILAAEALLHQASAQIGVATANQYPRFTLTASFGSQRTRAGDVGDGVNV-WNL 294 Query: 327 GPKLYLPIFDKGKIKSNIR 345 G L P+F G++++ R Sbjct: 295 GLGLVQPLFRGGELRARTR 313 >gi|311104634|ref|YP_003977487.1| efflux transporter outer membrane factor lipoprotein 2 [Achromobacter xylosoxidans A8] gi|310759323|gb|ADP14772.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 2 [Achromobacter xylosoxidans A8] Length = 481 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 87/360 (24%), Positives = 176/360 (48%), Gaps = 42/360 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS--SYASISHR 107 +WW+ + +LN LV L + + A + A+E + V + L PS + A +S R Sbjct: 65 EWWKRYGSEALNALVAEGLANSPDLAAAERNLAGAREQLRGQVNSSLLPSVDAGADVSRR 124 Query: 108 ---FIPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVI 157 +PNL + TGQ+ + + +DLFG R +SLA ++ Q++ A+ ++ Sbjct: 125 RALTMPNLPEPTAQYNVFTGQVHAKYDLDLFGAARFANASLAAQVEQQAFQLESARRSLA 184 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S ++ I A ER+++ + + L ++ + ++ G+ S+ + + + ++E+ Sbjct: 185 SNIVTGAITAAALAERVALTEKQVVLARQVARDTQRRYELGSASQNDALDADQDAATLEA 244 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-------NIGIPAD 270 +P L S+ H ++ LLG + + P+L + + +P++ Sbjct: 245 SLPGLRASWHATRHALAVLLG-----------RNPDQAPPDLAFGMLAVPQQVPVVVPSE 293 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFG 327 L+ RPDI + + + + A +G+A + L+PSLSL+ S+ + N + G W+ G Sbjct: 294 LLAARPDILFADAVVQAAAADVGVATAQLFPSLSLSASMGKSGFNWPAAMSGAGAIWAIG 353 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQY----ITWQETVLNAIKEVENALTSINEDKKIV 383 L PIF G + + S+A+E+Y + +++TVL A ++V + L+ ++ D + + Sbjct: 354 ASLTQPIFHGGALLAE----RSAAKERYEAALLQYKQTVLTAFRDVADTLSRLDADGQAL 409 >gi|329915431|ref|ZP_08276275.1| RND efflux system, outer membrane lipoprotein, NodT [Oxalobacteraceae bacterium IMCC9480] gi|327544898|gb|EGF30258.1| RND efflux system, outer membrane lipoprotein, NodT [Oxalobacteraceae bacterium IMCC9480] Length = 463 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 21/383 (5%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L WW+ F+D L + V+ AL N + A ER+ A+ + RA P A+ + Sbjct: 52 LLWWQRFDDPMLGRWVERALANNPGVDIARERVVQARALLRGARAQRRPLVGAATG---L 108 Query: 110 PNLKTNSTGQLDSD--------WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKL 160 + +++GQ SD W +D+ G E S+ A++ V A+L+V + Sbjct: 109 ESRSGSASGQGTSDASVEVTLDWDLDVGGGLLQAERSAAASVLRTEDLVQAARLSVAALT 168 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y++ + + ++ L + + + + G ++ L + A+ +IE+D Sbjct: 169 ARAYVEWQEARLDQALLADALAMQAEVQRVVRVLVRTGLAPQIDLDRARADAATIEADSA 228 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDI 278 R + L G E M +N P L + P DL+R RPD+ Sbjct: 229 DAAVRVRQAAAALQVLAG----ERPQAMDG-ANGLARLPGLRGQQPVPRPIDLLRLRPDL 283 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPIFD 336 R E+ LA + A +G+A+S YP L L G++ALT G + S L + ++D Sbjct: 284 RAAERSLAVAAANLGVAESAFYPRLRLPGTLALTSAGLGGGVLSIVSQSVAAVLDMVLYD 343 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ + + A S +E +++T+L A+++ E AL + + + LQ A + + Sbjct: 344 GGERSAGVDFARSRVREAGQLYRQTLLQALQQAEAALIAEEGLGRRIAALQRAGTAAEAA 403 Query: 397 MSLSMINYRQGRYSLLDILDIER 419 +S + Y G +D+LD +R Sbjct: 404 LSQARTLYSNGLTGFIDVLDAQR 426 >gi|21230855|ref|NP_636772.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769146|ref|YP_243908.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. 8004] gi|188992294|ref|YP_001904304.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. B100] gi|21112461|gb|AAM40696.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574478|gb|AAY49888.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734054|emb|CAP52260.1| outer membrane efflux protein [Xanthomonas campestris pv. campestris] Length = 504 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 94/423 (22%), Positives = 183/423 (43%), Gaps = 31/423 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYAS--I 104 WW + D L+ L+ LQ + ++ A R+ A+ + +AD PS YA + Sbjct: 73 WWRALGDPQLDALIAEGLQHSPSLAAADARLRQAQARTGTAQADRGPSLSVSGGYAGWQL 132 Query: 105 SHRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 + + S LD + +DL+G +R E+++ +A A+LN+ + Sbjct: 133 PESMVGEERGGSYAGSAQVVLDFRYGVDLWGGKRAAWEAAVDQAHAAEVDAQAARLNLSA 192 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + + +A+ L +K +EL+ + G S+L + + +A + + + Sbjct: 193 AIAEGYAQLAYAWDLQDVANDELARAQKTLELTQRRRGAGIDSELQVRQAQARVPAAQQQ 252 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ-SNNFQPNLYIPINIGIPADLIRNRPD 277 + + ++ + ++ L+G L + S + P L +PADL+ RPD Sbjct: 253 VQSAQQQIDEARNALAALVGQGPDRGLDIARPVLSQSLPPQL----PSALPADLLGRRPD 308 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSI-----ALTHDNSFPGYNTHWSFGPK 329 + ++ + I +AK+ YPSL +L G I L S G P Sbjct: 309 VVAARWRVEAADKDIAVAKARFYPSLNLTALGGVINSDVGKLLESGSVLGV-----VAPA 363 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIFD G++K+ + +++ + + VL+A++EV + + ++ ++ A Sbjct: 364 LSLPIFDGGRLKAGLAGSDAQYDLAVADYNQKVLDALREVADQVNAVRSLEQRARAQNDA 423 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ + L+ YR G S L++L ++ ++ Q + V L A+G G Sbjct: 424 VQTASAAFGLAQQRYRAGIGSYLEVLSVQEQLLTARQRMAGLHSQQLMASVKLRRALGGG 483 Query: 450 YNP 452 + P Sbjct: 484 FTP 486 >gi|83716676|ref|YP_438310.1| outer membrane efflux protein [Burkholderia thailandensis E264] gi|167614750|ref|ZP_02383385.1| outer membrane efflux protein [Burkholderia thailandensis Bt4] gi|257141339|ref|ZP_05589601.1| outer membrane efflux protein [Burkholderia thailandensis E264] gi|83650501|gb|ABC34565.1| outer membrane efflux protein [Burkholderia thailandensis E264] Length = 477 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 37/461 (8%) Query: 20 VGPEYTKP-----HMPLLPTQFSIGNS----KNLINIDTL--KWWESFNDTSLNKLVKIA 68 VGP+Y P + P F G S + + + L +WW F+D +L+ LV+ A Sbjct: 23 VGPDYRIPPGALVNAPAANRPFVAGASGASGAKVASGEPLPDRWWRLFDDPALDGLVEKA 82 Query: 69 LQQNLTILQATERINAAKENIL----------SVRADLFP-----SSYASISHRFIPNLK 113 L N+ + A N A+ + L S+ AD S+ + +SH P + Sbjct: 83 LSGNVDLRVAE--ANLARSDALLAAARTAREPSIAADASTNYTQQSAQSVLSHVEPPRHE 140 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + G + + +DLFG RR IE++ A+ ++ A D+A++NV +++ +Y D + Sbjct: 141 IYNIG-FTASYDLDLFGGIRRGIEAASADREAVAAARDLARVNVAAEVTRAYSDLCNAGN 199 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH- 231 ++ IA + + + ++ + L+ G + E S + + LE + R+N Sbjct: 200 QLDIARRSISVQERRLALTRQLVAHGRAPSFEQRRDEGAADSSRAQLAPLE-ARRLNAAF 258 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G P + + +L PI G L++ RPD+R E++LA + A+ Sbjct: 259 RLAALTGQPPENYDRALLACRTPL--SLAAPIPTGDGRALLKRRPDVRAAERRLAAATAR 316 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 IG+ + LYP + L SI T + F ++ GP + + + I++ I A + Sbjct: 317 IGVETAALYPDIKLGASIGSTGGAASFFTPLTNRFAIGPMVTWDLH-RNAIRARIEAARA 375 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ + TVL A++E E AL + + + +L+ + + + M + R G+ Sbjct: 376 DSRASLAHFDATVLAALRETETALETYAGALERLRRLEASRDAARAVMERTDELRRGGKV 435 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L LD ER + ++ A+R++ + ++A+G G+ Sbjct: 436 GGLVALDAERGWLAAQAAVAAAQREVNDDQIATFLALGGGW 476 >gi|332760829|gb|EGJ91117.1| cation efflux system protein cusC [Shigella flexneri 4343-70] gi|333008093|gb|EGK27569.1| cation efflux system protein cusC [Shigella flexneri K-218] Length = 318 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 21/305 (6%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + SY + + ++ IA + L Y+++ + G+++ L+L + I+S Sbjct: 23 LVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIEST 82 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 SDI + + + LLG + Q Q+ N + + G+ + ++ R Sbjct: 83 RSDIAKRQGELAQANNALQLLLG----SYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQR 138 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYL 332 PDI E L + A IG A++ +PS+SL I+ + F + W+F PK+ + Sbjct: 139 PDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEI 198 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVE 391 PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +AL D +I + ++ Sbjct: 199 PIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLAS 258 Query: 392 LH---KKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIA 445 L +++ +L Y+ G S L++LD ER AT + +DL+ A RQ+ + Y LY A Sbjct: 259 LQITLQRARAL----YQHGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNEIY--LYTA 311 Query: 446 IGSGY 450 +G G+ Sbjct: 312 LGGGW 316 >gi|189465025|ref|ZP_03013810.1| hypothetical protein BACINT_01369 [Bacteroides intestinalis DSM 17393] gi|189437299|gb|EDV06284.1| hypothetical protein BACINT_01369 [Bacteroides intestinalis DSM 17393] Length = 462 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 33/459 (7%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ ++ + N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPEDITAAGLYRDTTSVNDTLVADTANFGNLPWREVFTDPQLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 AL N + A + A+ ++S R P S ++S + + + Sbjct: 73 QALANNPDLRSAALNVKKAEAALMSARLAYAPTLALSPQGTVSSWDKGKATQTYSLPVTA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFGQ +R + SL Y Q + VI+ + Y ++ I Sbjct: 133 SWQIDLFGQILNPKRGAQVSLKQTQF-YEQA--VQTQVIANVANMYYTLLMLDRQLQITE 189 Query: 179 QILDLYKKNIELSHLKFTQGA--TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 D+ KKN+E G T+ + + A + + +P++ +S R + + + Sbjct: 190 STADILKKNVETVEAMKDAGIYNTTSAGVEQTRAAYAQVLASLPSMRQSIRETENALCLM 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L PA E + + L + GIP L+ NRPD++ E LA S A+ Sbjct: 250 LNQPAQEIERGVLESQQ-----LPTEFSAGIPLQLLSNRPDVKAAEMSLAASYYNTNSAR 304 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YP ++L+GS T+ PG + G L P+F +G + +++A++ + Sbjct: 305 AAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGANIARLKQAKAQEE 363 Query: 353 EQYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + I +Q T+L A EV NAL + +K I ++Q V +K+ + + G + Sbjct: 364 QSKIQFQTTLLKAGNEVSNALYQYQMTSEKAISREIQ--VNSARKAAEDTKELFNLGTST 421 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L E++ ++ ++ + LY A+G G Sbjct: 422 YLEVLSAEQSYLSAQISEVSDTFDRMQAVISLYQALGGG 460 >gi|330961834|gb|EGH62094.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 488 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 98/481 (20%), Positives = 212/481 (44%), Gaps = 43/481 (8%) Query: 3 ILRAIFSLFIV----LLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWW 53 I+R + L I+ L++GC +G +PH LL T +I ++ T +WW Sbjct: 5 IIRGLEPLGILALTLLISGC-IGTHGIQPHASLLAADRLATDQAIQSAARDARWPTAQWW 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPN 111 ++ D L++ +++A + ++ A R+ AK I L S AS+ P+ Sbjct: 64 RAYGDAQLDRWIELATLGSPSLAIAAARVRQAKAMAGIAESNESLQIQSNASLQRHDWPS 123 Query: 112 LKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNV 156 + G L + +D++G+ R+ +S LD A+ A++ A+L + Sbjct: 124 DQFYRPGALADTRTWDNNASLGFSYSLDIWGRERN--ASEQALDLAHVSAAELRQAQLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R+ IA L+ ++ ++L+ + G + + + E + Sbjct: 182 QENIVRAYIQLALNYARLDIAEAALEQQQQILDLAQRRLKGGIGTHFDVSQAETSLPEAH 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I LE++ ++ + ++ L G + + +Q+ + L +P +PA+L+ RP Sbjct: 242 RQIDALEEAIALSRNQLAALAGKGPGQGVE-LQRPALALHSALKLPS--ALPAELLGQRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLY 331 D+ ++ I +A++ YP + L GS++ G + GP + Sbjct: 299 DVVAARWQVEAQARGIDVARAGFYPDIDLVGSLSYMATGGGLLEFLSGSKLGYKVGPAIS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQH 388 LPIFD G++++ + +A + + + ++ A++ V + L S++ + + Sbjct: 359 LPIFDGGRLRAQLGQASAGYDLAVAHYNQALVMALRSVSDQLIRRASMDNQQVFAAR--- 415 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +V +K+ +++I +++G L++L+ + + K+Y L +A+G Sbjct: 416 SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFHQQEVQQQVEAARLKAYAGLVVALGG 475 Query: 449 G 449 G Sbjct: 476 G 476 >gi|331008190|gb|EGH88247.1| outer membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 469 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 208/466 (44%), Gaps = 35/466 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVKI 67 LL GC + P+Y +P P+ Q+ + + + + W F D L +L + Sbjct: 12 ALLTGCVNLAPDYQRPEAPV-SNQWLAATAGQPVASGSVPTDIDWQNFFTDKRLVRLQTL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS-STSMTGKSSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLPLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +++ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G E L + Q + + +P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHSLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L GS + + F + WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTANAGSASTSLSGLFTSGSGSWSFAPSISVPIFDGGSNQATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ YR Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELADALYRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 423 GSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|89900307|ref|YP_522778.1| RND efflux system outer membrane lipoprotein NodT [Rhodoferax ferrireducens T118] gi|89345044|gb|ABD69247.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodoferax ferrireducens T118] Length = 483 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 107/477 (22%), Positives = 199/477 (41%), Gaps = 49/477 (10%) Query: 5 RAIFSLFIVL-LAGCT----VGPEYT-KPHMPL-LPTQFSIGNSKNLINIDTLKWWESFN 57 R+ + F+VL L+ C +GP+ + L LP Q S + N +WW Sbjct: 14 RSALAAFVVLGLSACANMQEIGPQAALRDAASLGLPIQSSASVAPNA------QWWRELG 67 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPN--- 111 D LN L+ AL N ++ A R+ A+ + A P A + +F N Sbjct: 68 DEQLNGLIDQALAANPSLKIAQARLARAQAGAAATEAASGPQLSAGVDAMRQKFTANGMI 127 Query: 112 -------LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP-S 163 + T QL +W++D FG+ R ++ A A +++ + + Sbjct: 128 PPPLAGSMAETGTAQLSGNWELDFFGKNRAALAAALGSARAAQADADAARTLLASTVARN 187 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y ++++A ++L + + L + G ++L L E + I L Sbjct: 188 YFQLTRLHAQLALAQRLLAQRTQVLRLVQHRLDAGLDTQLELRLSEGNLPDARLQIEGLH 247 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIR 279 + + H ++ L+G P ++ P L+ I I P ADL+ R DI Sbjct: 248 EQITLTTHALAALIGQP---------NRALAIVPPLHDAIEIAAPTTVSADLLGRRADIA 298 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 ++ + + AKS YP+++L G ++ D + W GP L LP+FD Sbjct: 299 AARWRVEAASQDVAGAKSQFYPNVNLVAFAGFSSIGLDRLLGAGSEQWGVGPALRLPLFD 358 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G++++N+R + ++ V++A+++V + L + + + + A + + + Sbjct: 359 GGRLRANLRGKTADLDAAIESYNAAVIDAVRDVADQLAATQAITRQQAEQRAAQDSAEHA 418 Query: 397 MSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ Y G +LL +L E A ++ +DLS R + V L A+G GY Sbjct: 419 YAIATRRYEAGLGNLLSVLAAETAVLSQSRQGIDLSARAR---DTQVSLMRALGGGY 472 >gi|148254882|ref|YP_001239467.1| putative outer membrane lipoprotein (NodT-like), RND efflux system [Bradyrhizobium sp. BTAi1] gi|146407055|gb|ABQ35561.1| putative outer membrane lipoprotein (NodT-like), RND efflux system [Bradyrhizobium sp. BTAi1] Length = 523 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 98/471 (20%), Positives = 206/471 (43%), Gaps = 43/471 (9%) Query: 17 GCTVGPEYTKPHMPLLP--------------TQFSIGNSKNLINIDT-LKWWESFNDTSL 61 GC VGP++ +P P + T + + I+ D +WW +F L Sbjct: 29 GCAVGPDFDRPEPPAVAGYTRKPLASPAADRTGPQVAPQQFQIDADVPARWWAAFRSFPL 88 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYAS-------ISHRFIPN 111 N+L++ ++ +N T+ A I A EN + R +P ++Y + ++ + P Sbjct: 89 NELIRRSVARNPTLDAADAAIRIANENAQAQRGLFYPQLGANYTAADQQSSNMARQQGPG 148 Query: 112 LKTNS-----TGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 S T QL + DL+GQ R +ES A + A Q++ A L + + ++ + I Sbjct: 149 DPPQSRYSLHTAQLTISFVPDLWGQNARSVESLEAQTEQARFQLEAAYLTLTTNVVTAAI 208 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +I+ +I+ + + + + + + G +++ ++ + + +E +P L+K Sbjct: 209 QEASLRGQIAATERIIKIERDILGILNSQLQAGQAAQVDVLTQQTALAQVEQTLPPLQKQ 268 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQE 282 + ++ L G + A E Q +L +P N I +PA L+ RPDIR + Sbjct: 269 IAIQRDLLTALAGQFSADEITETFDLQ------HLALPRNLPISLPAALVAQRPDIRAAQ 322 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + A +G+A + P+++L+ GS A ++ +FD Sbjct: 323 ANLHAASALVGVAIAARLPNITLSANPGSSAFRPAELLTPGTLFYTVAGSATATVFDGLT 382 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + AE++ + +++ V+ A++ V ++L S+ D + V A + + ++ + Sbjct: 383 LYHRQKSAEAALDQAGALYRQAVITALQNVADSLRSLQADARAVQAAIKAEDSARATLDI 442 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G+ S + +L+ ++A + A+ L++A+G G+ Sbjct: 443 IQKQLTLGQISQVTVLNAQQAYLNTAIARVQAEATRLADTAALFMALGGGW 493 >gi|134295579|ref|YP_001119314.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134138736|gb|ABO54479.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 501 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/429 (22%), Positives = 192/429 (44%), Gaps = 38/429 (8%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 TL W F D L KL+ ALQ N +I QA RI A I S R++L P + AS S + Sbjct: 62 TLDWASQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYS--W 119 Query: 109 IPNLKTNST-------GQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 L +++ GQ S+ W +DL+G+ R + ++++ +A A + A Sbjct: 120 TRELYSSNALFPPPYGGQWYSENNVLASASWDLDLWGKNRERLHTAVSQEKAAEADMQQA 179 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ + S + +Y IA + + + +++ + + G + + I Sbjct: 180 RITLASSVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNI 239 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + L+ + ++ LLG L N P+ + + +PADL+ Sbjct: 240 ATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVMN---PSGTVALPGNLPADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWS 325 RPDI ++ ++ + AK++ +P ++L ++F G+ Sbjct: 297 ARRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQ 352 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FGP ++LPIFD G +++ ++ + + +T++ A+ +V + SI + + Sbjct: 353 FGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQVASIRAVDRQMDD 412 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDL 442 Q A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 413 AQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLAL 469 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 470 IKALGGGFD 478 >gi|313500506|gb|ADR61872.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida BIRD-1] Length = 509 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/475 (19%), Positives = 206/475 (43%), Gaps = 30/475 (6%) Query: 1 MNILRAIFSLFIVL-LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 + L+A + + L L+GC + P+ L T +I + + +WW + Sbjct: 6 IRTLKAFSACALALTLSGCIGTWGIAPQSKTLQANTLTTDAAIREAATDAHWPDQQWWHA 65 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLK 113 + D L++ + +A+ + ++ A R+ AK ++ L + +++ P + Sbjct: 66 YGDPQLDRWIALAVAGSPSLAMAAARVREAKAMAGVVESAEKLQANGQSTLKRHNWPEDQ 125 Query: 114 TNSTGQLDS------------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 G L + +DL+G+ R+ E ++ + A+ A+L + + + Sbjct: 126 FYGPGALSGANTWDNNAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELQNNV 185 Query: 161 IPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI + HF +R I L+ ++ + L+ + G + + + EA + + Sbjct: 186 VRAYIQLSLHFAQR-DIVKAELEQQEQILALAKRRLDAGIGTHFEVSQAEAPLPETHRQL 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 +L + + + ++ L G E +Q+ + L +P N+ PA+L+ RPD+ Sbjct: 245 DSLNEEIALTRNQLAALAGKGPGEGAQ-LQRPTLALAAPLNLPSNL--PAELVGQRPDVV 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPI 334 ++A I IA + +P++ L GS+ P G +++ GP + LPI Sbjct: 302 ASRWQVAAQARGIDIAHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPI 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+++S + A + + +TV+ A+K + + L K+ +V + Sbjct: 362 FDGGRLRSQLGVASAGYDVAVARYNQTVVGALKNISDQLIRRESMKEQSHFAAESVAAAQ 421 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K+ ++M+ +++G L++L+ + + + + ++ +L A+G G Sbjct: 422 KTYDIAMVAFQRGLTDYLNVLNAQTLLFRQQQVQQQVQAARLVAHAELVTALGGG 476 >gi|325924477|ref|ZP_08185997.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] gi|325545039|gb|EGD16373.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas gardneri ATCC 19865] Length = 504 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 25/420 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASISH 106 WW + D LN L+ LQ + ++ A R+ A+ I + +AD PS YA + Sbjct: 73 WWRALGDPQLNALIAEGLQHSPSLAAADARLRQAQARIGTAQADRGPSLSVSGGYAGVQ- 131 Query: 107 RFIP--------NLKTNSTGQ--LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 +P K GQ LD + +DL+G +R E+++ +A A+LN Sbjct: 132 --LPESVVGEERGGKFGGNGQVVLDFRYGVDLWGGKRAAWEAAVDQAHAADVDAQAARLN 189 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y + +A+ L +K ++L+ + G S L + + +A + + Sbjct: 190 LSAAIAEAYAQLDYAWRLHDVANDELMRAQKTLDLTRQRRGAGIDSDLQVRQSQARVPAA 249 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + + ++ ++ L+G L + + + + L +P +PA+L+ +R Sbjct: 250 QQQLQSAQQQIDEARTALAALVGQGPDRGLD-IARPTLSSAGALQLPS--ALPAELLGHR 306 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+ ++ + I +AK+ YPS ++ L + + + FG P L L Sbjct: 307 PDVVAARWRVEAADKNIAVAKTRFYPSFNITALGGLVNRDVGQLLESASLFGVVAPALSL 366 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD GK+++N+ +++ + + VL+A++EV + + ++ ++ AV+ Sbjct: 367 PIFDGGKLRANLAGSDAQYDLAVADYNQKVLDALREVADQVNAVRSLEQRARSQDEAVQT 426 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S L++L ++ ++ + Q + V L A+G G+ P Sbjct: 427 VTAAFDLAQQRYRAGIGSYLEVLSVQEQLLLARQRMASLQSQQLLASVRLQRALGGGFTP 486 >gi|37222133|gb|AAP49326.1| Uvs055 [uncultured bacterium] Length = 341 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/283 (28%), Positives = 151/283 (53%), Gaps = 9/283 (3%) Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +RI IAH+ + K++ E++ F G S+L L + + + + + IP LE + ++ + Sbjct: 13 QRIEIAHKNTAIQKRSFEITEKIFKSGQGSELDLQQAKTQYLATLATIPDLEAA-QIKLR 71 Query: 232 N-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 N I LLG A L + + + P + + IPA+L+ RPD+R ++A A Sbjct: 72 NAIGALLGR-APGLLPELAQVKGSL-PQIESVVIDAIPAELLLRRPDVRTAAWQVAAQSA 129 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +IGIAK+D YPS+ L GSI + ++ + P ++ + GP L +FD G+I++N+R + Sbjct: 130 QIGIAKADYYPSIKLLGSIGWSTNSLANSPEVSSI-AGGPSLSWNLFDYGRIRNNVRLQD 188 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 Q+ +Q V+ A +E+++A ++ + + L ++ ++S+ L+ Y++G Sbjct: 189 VRLQQTIEAFQYQVVQAAREIDDAAITLVKTDEQQAVLSASLGAAERSLELANKRYQEGL 248 Query: 409 YSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+ +R ++ E DL L+ + + LY AIG G+ Sbjct: 249 ADFQRVLEAQRVLFSQAERDLLNRGAHLS-AVISLYKAIGGGW 290 >gi|134291760|ref|YP_001115529.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134949|gb|ABO59274.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 477 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/417 (23%), Positives = 190/417 (45%), Gaps = 24/417 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR-ADLFPSSYA--SISHRF 108 W F D L+ LV AL +N + A A + +L +R A L+PS S SH Sbjct: 49 WPAWFGDPQLHSLVDAALARNFDVRAAAA-RVAQAQALLGMRDAALWPSVRVDPSFSHAR 107 Query: 109 IPNLKTNSTGQ---------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + N+ + + + +++DL+G+ R + N+ A A D +L V + Sbjct: 108 VSGTVDNALPKRIMHNWSVPVAASYEVDLWGRLRGDADVGAQNVLQAAADRDAVRLRVAT 167 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ R+ + ++ + L + +++ + GA S L ++ A++ + +D Sbjct: 168 EVAVDYLTLRYVDDDLATLDSAIGLRRTALDVIAARVRAGAASDLDALRASADLDTARAD 227 Query: 219 IPTLEKSFRMN-VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + + R N V I+ L G + F + + P + G+P+ L+ RPD Sbjct: 228 LAD-SRRLRENLVDAIAVLTGMAPSAF-----ELEASAVPVRVPDVPPGLPSTLLARRPD 281 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPI 334 + +++ + ++GIA++ P+L+L +G A +F N+ WS G + L + Sbjct: 282 VFAAARRVDAASLEVGIARTAWLPTLTLTADGGFATRDLRTFIDRNSSLWSLGANVALTL 341 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK + + A + + ++ T + A+++V++AL I ++ + + AV Sbjct: 342 FDGGKRDAAVAAARAGVEVADANYRATAIGALRDVQDALNDIAAQRERIARYGDAVRATD 401 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LS+ Y G L+++D +R L +++ LA + V L A+G G+ Sbjct: 402 AAARLSLSRYAHGYVGYLEVIDADRDALNARRQLIHSRQALAIATVSLVRALGGGWT 458 >gi|299530431|ref|ZP_07043852.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298721571|gb|EFI62507.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 462 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 97/412 (23%), Positives = 190/412 (46%), Gaps = 22/412 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNL--------TILQATERINAAKENILSVRADLFPSSYAS 103 WW F L+ LV+ A Q+L A + + AD + A+ Sbjct: 51 WWHGFGSPELSALVEQARTQSLDVAAAVARVQQADARATYARAARVPDLNADFGATRSAA 110 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 + + T G L S +++D +G++R + +++ +N ++ + +L V + + Sbjct: 111 MDSHTERDASTWRVG-LSSSYELDFWGRQRALRDAAESNRQASVFDRETVRLTVTASVAQ 169 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++ +ER +IA L++ ++ ++L + GA + + L + ++ + + + L Sbjct: 170 AWLQCVGLRERAAIAQLNLEISERLLKLVESRARYGAATSVELAQQRGQVAAQQRVVALL 229 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 K + H + LL T M S NL IP + G PADLI RPD+ Sbjct: 230 RKQI-ADAHAVLALLSGQWT-----MDLVSETSLSNLAIPGVRQGTPADLITRRPDVAKA 283 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGK 339 E +L + A + A++ + P ++L ++ + F N S + PIFD G+ Sbjct: 284 EAQLLAADANLAAARAAMLPRVTLTAGLS-SESEKFSRLLENPLSSLAAGILAPIFDAGR 342 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + SN A + QE I +++ +L A +V+ AL +++ ++ V ++++SL Sbjct: 343 LASNRELAAAQKQELVIGYRKAILQAFNDVQTALNAVDGAERQAVVQAEEVAQAQRALSL 402 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ-LAKSYVDLYIAIGSGY 450 + Y+ G +L +LD++R A DL++ RQ ++ + LY A+G G+ Sbjct: 403 AESRYKAGADNLQTLLDVQR-VAYQSRDLAVQIRQERLQASIALYRALGGGW 453 >gi|323525831|ref|YP_004227984.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323382833|gb|ADX54924.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 516 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 97/433 (22%), Positives = 196/433 (45%), Gaps = 53/433 (12%) Query: 15 LAGCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESF 56 LA C+ GP P +P + QF +G +WW + Sbjct: 34 LAACSFGPNGEPPALPQPVHYGSEPQPAQTVAAQGVAQQFMVGAKP------VPEWWTLY 87 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--IP 110 +LN LV L+ + ++ + + AA+E + + V + + P+ A + +R IP Sbjct: 88 RSDALNALVDEGLRNSPSLAATEQTLAAAREQLRAQVGSSMLPTIDAGGQATRNRALAIP 147 Query: 111 NLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPS 163 + +N+ GQL + + IDLFG R +++LA + A Q+D A+ + + ++ + Sbjct: 148 EIGSNTFLYNIFVGQLQAHYTIDLFGASRLADAALAARVNVQAYQLDAARRALAANIVSA 207 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I + + +I +++ L + ++ GA S + + S+ + +P L+ Sbjct: 208 AITSAALRAQIDTTERLVTLADDQARDAARRYALGAVSHADQLSAQQSAASVSASLPGLK 267 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQ 281 + ++ H ++ LLG ++ + L++P + + +P++L+R RPDI Sbjct: 268 QQWQSTRHALAVLLGRTPDAAPGDLELAA------LHLPEQVPVVVPSELLRARPDIEAA 321 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + L + A +G+A + ++P+LSL+ S+ + + G WS G L P+F G Sbjct: 322 DAALKAAAADVGVATAQMFPNLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHGG 381 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + R A ++ + +++TVL A + V + L ++ D + + HA +S + Sbjct: 382 ALAAQRRAAMNTYEATVSQYKQTVLAAFQNVADTLAALEHDAQAL----HAANTAARS-A 436 Query: 399 LSMINYRQGRYSL 411 + + GRY L Sbjct: 437 QGIFDETSGRYRL 449 >gi|301060107|ref|ZP_07200975.1| outer membrane efflux protein [delta proteobacterium NaphS2] gi|300445792|gb|EFK09689.1| outer membrane efflux protein [delta proteobacterium NaphS2] Length = 262 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGY 320 I G+P+ L+ RPDI + LA A IG+A++ +P++SL G + L S Sbjct: 52 IPTGLPSTLLERRPDILQAQYLLASQTANIGVAEAMRFPAISLTGMVGLASSELASITSS 111 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVENALTSIN 377 WS G L+ PIF+ NIRR E+ +E ++ TVL A +EV++AL I+ Sbjct: 112 GGAWSVGGGLFGPIFE---FYKNIRRVQIEEAKTKEVLYFYENTVLIAFQEVDDALVEID 168 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + + ++ V K + L+ + Y +G S L++LD ER+ +++LS K+Q Sbjct: 169 TFRNQKSAVERKVIAAKNANRLAKLRYDKGVSSYLEVLDTERSLFSAQLELSELKQQYLN 228 Query: 438 SYVDLYIAIGSGY 450 YV LY A+G G+ Sbjct: 229 GYVKLYKALGGGW 241 >gi|307609075|emb|CBW98508.1| hypothetical protein LPW_03441 [Legionella pneumophila 130b] Length = 448 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 210/463 (45%), Gaps = 39/463 (8%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI K+ D L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSIQTEKSAYLPD-LHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLQQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLVAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ HNI Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSRIQRIEAQIKVVQ-------HNIVV--- 232 Query: 239 YPATEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LH++ ++ N N +P N +P+ ++ RPDI E L + Sbjct: 233 --TKNALHFLFNENPGDVEIKTLFENIDSNQLVPGN--LPSSVLSVRPDIHEAEALLKAA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A +G ++L P ++L + + + + GP + LP+F + + + Sbjct: 289 HADVGAITANLLPGINLGAYLGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVDVS 342 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR G Sbjct: 343 KARYKAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALSDEKQQCHLAEVRYRHG 402 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+++ + + ++ ++ K + S V LY +G GY Sbjct: 403 IDDYLNLIKCQILLDEFKLVINQNKLEKLLSIVTLYQDLGGGY 445 >gi|71066132|ref|YP_264859.1| outer membrane efflux protein, OprM [Psychrobacter arcticus 273-4] gi|71039117|gb|AAZ19425.1| outer membrane efflux protein, OprM [Psychrobacter arcticus 273-4] Length = 606 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/464 (21%), Positives = 210/464 (45%), Gaps = 39/464 (8%) Query: 15 LAGCTVGPEY-TKP--HMPLLPTQ--------FSIGNSKNLINIDTLKWWESFNDTSLNK 63 +A C P+ T+P +P LP + ++ N++ ++ +W ++D L Sbjct: 45 MAACNTIPKADTRPVLAVPNLPIEQTYDAFDKETVSNAQQ-ASLAGQRWQNFYSDERLKG 103 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD 123 L+ + LQ N A I ++ + P + + + GQ + Sbjct: 104 LIALGLQNNKDFESARLAIEKSRAQYQITDINDLPRIDGNAGYS-----RARQRGQTGDN 158 Query: 124 WKI---------DLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 +K+ D +G+ + + +L N S A D ++++IS + SY + + + Sbjct: 159 YKVNLGLANYELDFWGKIASLKDQALQNFLSTTAAKDATQISLISNIAQSYANLSYSLAQ 218 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A ++ +K++ ++ +F G KL ++ A +++ + + S + + + Sbjct: 219 LQLAEATVESREKSLFIASKRFEAGIDPKLPSLQSSASLENARLAVLRAQSSILKSRNAL 278 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P L +N ++ + G+P++L+R RPD+ E L + A I Sbjct: 279 QFLVGGPIPTNLIPTPAVNNITSQQVF---SAGLPSELLRYRPDVLQAEYNLKAAGANIE 335 Query: 294 IAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A++ YPS+SL ++ L+ ++ F WSFGP + +PIFD G++ +N A+ Sbjct: 336 VARASYYPSISLASNVGLSSGSLNDLFKSGAVSWSFGPSVSVPIFDAGRLDANYDLAQIE 395 Query: 351 AQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ +++ ++ A +EV + L ++ E +LQ E ++ ++ ++ G Sbjct: 396 RKQTLASYERSIQTAFREVSDVLATRATLGEQLDAQYRLQDNFE---QTYQIADARFKAG 452 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + LD+LD +R+ + + + Q S ++LY +G G N Sbjct: 453 IANYLDVLDAQRSLFSTQQGILDLELQKIISQIELYQVLGGGAN 496 >gi|219872177|ref|YP_002476552.1| RND efflux system outer membrane lipoprotein/RND superfamily resistance-nodulation-cell division antiporter [Haemophilus parasuis SH0165] gi|219692381|gb|ACL33604.1| RND efflux system outer membrane lipoprotein/RND superfamily resistance-nodulation-cell division antiporter [Haemophilus parasuis SH0165] Length = 462 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 104/427 (24%), Positives = 194/427 (45%), Gaps = 43/427 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH 106 +WW +NDT LN+LV+ AL N+ + + +N A N V A+L P S +S S Sbjct: 50 QWWLGYNDTQLNRLVETALANNINLAKTAISVNKALYNANLVGANLVPTFTASEKSSASK 109 Query: 107 RFIPNLKTNSTG--------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 + NSTG L+ + +DL+G+ R S+ A + Q D+ A+L++ Sbjct: 110 GVGSSSNLNSTGTSSIGHQISLNLSYTLDLWGRLRDTASA-AEWEHKATQKDLQAARLSL 168 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ ++ SY + ++++ I I Q + Y++ + KF QG +LS+ + + S + Sbjct: 169 INAVVSSYYNLAYYQDAIRITQQSIKSYEQINRILSNKFKQGLIDQLSVDQSMQAVLSAQ 228 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIR 273 + + L+ + + + + LL E L N+ L + +++ +P I Sbjct: 229 NTLINLQSAQKSSEQVLRNLLNLKPNEPLVV------NYPSILKVKLQDVDVNVPVSTIA 282 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-------THDNSFPGYNTHWSF 326 NRPD+ ++L + + ++ +P+++L GS+ T DN G + Sbjct: 283 NRPDVLASLQRLQGAFKNLTATENSWFPTVTLGGSLTGSSTKFNNTSDNPVAGGVVSFD- 341 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 LP D ++++NI+ +E S + + +++TV A+ E++ ++ K L Sbjct: 342 -----LPFLDWNRVQNNIKISEESYKLAKLNYEQTVTTALNEIDTYYSTYQLSKSGYANL 396 Query: 387 QHAVELHKKSMSLSMINYRQGRYSL---LDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 Q E +K Y QG L L ++ ER++ E+ L K L K+ +Y Sbjct: 397 QKKYEYDRKISGYYKNRYDQGISELREWLSAMNTERSS---ELSLLENKYTLLKNENAIY 453 Query: 444 IAIGSGY 450 A+ Y Sbjct: 454 QAMAGKY 460 >gi|253998140|ref|YP_003050203.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253984819|gb|ACT49676.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 494 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 102/468 (21%), Positives = 196/468 (41%), Gaps = 32/468 (6%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +L + S+ L+ C+ P P + P ++ + + +WW+SF L Sbjct: 34 RLLGGMMSIVAASLSACSSTPPQPLPATSV-PDRWQYATGSVAADAVSQQWWQSFGSDEL 92 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---------SHRFIPNL 112 ++L+ A + + + A R+ A A L P + SHR Sbjct: 93 DQLLTRAQRDSFDVQAAAARVEQAVAQARIAGAPLLPELNLGVNASRQDYLDSHRNADG- 151 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++ T L + +++D +G+ R + + + L S+ +D +L + S + Y+ Sbjct: 152 -SSHTVALAASYEVDFWGRNRALRDRARYQLQSSRHDLDTVQLTLTSGVARLYLQVLGLA 210 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER+SIA + + +E+ ++ GA + L + + + S + + TL + Sbjct: 211 ERLSIAELNVANASRVLEVVEARYRAGAATALEVAQQRGLLASQQRTLETLRQQLADGKT 270 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L+G P E + P I G+PA L+ RPDI E LA + A Sbjct: 271 ALAVLIGLPPAELVISGPGLQGVQTPQ----ITPGLPAQLLVRRPDIARAEAALAAADAN 326 Query: 292 IGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A++ + P + L GS+ L + + P Y S L P+F+ G++ + Sbjct: 327 TIAARAAMLPRVQLTGSLGLGGEQWSDMLAHPIY----SVAAALTAPVFNAGRLAAGRDL 382 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + E ++ ++ A +VE AL ++ ++ + +++ L+ YR Sbjct: 383 ALAQRTELLQNYRAAIVAAFGDVETALNAMQAIEQQRRWQSEELAQAERAFRLAETRYRA 442 Query: 407 GRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +LL +LD +R + V L++A Q V L+ A+G G+ Sbjct: 443 GADTLLTMLDAQRTWYSAQDQAVQLTLANLQ---GRVALFKALGGGWQ 487 >gi|224538351|ref|ZP_03678890.1| hypothetical protein BACCELL_03242 [Bacteroides cellulosilyticus DSM 14838] gi|224519980|gb|EEF89085.1| hypothetical protein BACCELL_03242 [Bacteroides cellulosilyticus DSM 14838] Length = 456 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 110/475 (23%), Positives = 204/475 (42%), Gaps = 67/475 (14%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----------INIDTLKWWESFNDT 59 + L++ C + +Y +P + N++NL ++I L W E F DT Sbjct: 12 VLTALVSSCGIYTQYKRPEV----------NTENLYRVEETQSDSVSIADLSWDELFTDT 61 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L L++ LQ N + N A+ + +A L S A ++P+L+ + G Sbjct: 62 DLQSLIQEGLQSNTDL-------NIARLKVKEAQATLMSSKLA-----YLPSLQLSPEGT 109 Query: 120 LDS----------------DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIP 162 L S W+ID+FG+ + + S A L+ + A + V++ + Sbjct: 110 LSSFDGAKPSKTYNLGTSASWEIDVFGKLTNAKRKSRAALEESDAYRLAVQTQVVATVAA 169 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y E++ I + +++ + + G + ++ + EA S ES + L Sbjct: 170 NYYSLLMLDEQVDITKATIKSWEEYVHSLRVLMKAGQADRSTISQAEASRLSAESTLQDL 229 Query: 223 EKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + +ST LG P + Q+ F L + G+ DL+ RPD+R Sbjct: 230 LQQVNELENTLSTFLGRIPGPIKRGKLNGQT--FPQEL----SAGVSLDLVSRRPDVREA 283 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDK 337 E L + A+S YPS++L+GS T+ PG + G L P+F++ Sbjct: 284 EASLKQAFYSTNQARSAFYPSITLSGSAGWTNSGGAAITNPGSWLLQAVG-SLVQPLFNR 342 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK---KIVTKLQHAVELHK 394 G +N++ A++ QE T+++ +L+A EV NALT + ++ TK +E + Sbjct: 343 GTNIANLKIAKAQQQEAVFTFRQALLDAGSEVNNALTQWQTARNKIELATKQIQHLETTE 402 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L M + G + L++L ++ ++L + + ++LY A+G G Sbjct: 403 HDTQLLM---KYGTTNYLEVLVARQSLLSARLNLVADRYSEIEGVINLYHALGGG 454 >gi|167854537|ref|ZP_02477318.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Haemophilus parasuis 29755] gi|167854292|gb|EDS25525.1| TDP-4-oxo-6-deoxy-D-glucose transaminase [Haemophilus parasuis 29755] Length = 462 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 102/424 (24%), Positives = 189/424 (44%), Gaps = 37/424 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH 106 +WW +NDT LN+LV+ AL N+ + + +N A N V A+L P S +S S Sbjct: 50 QWWLGYNDTQLNRLVETALANNINLAKTAISVNKALYNANLVGANLVPTFTASEKSSASK 109 Query: 107 RFIPNLKTNSTGQ--------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 + NSTG L+ + +DL+G+ R S+ A + Q D+ A+L++ Sbjct: 110 GVGSSSNLNSTGTSSIGHQIGLNLSYTLDLWGRLRDTASA-AEWEHKATQKDLQAARLSL 168 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ ++ SY + ++++ I I Q + Y++ + KF QG +LS+ + + S + Sbjct: 169 INAVVSSYYNLAYYQDAIRITQQSIKSYEQINRILSNKFKQGLIDQLSVDQSMQAVLSAQ 228 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIR 273 + + L+ + + + + LL E L N+ L + +++ +P I Sbjct: 229 NTLINLQSAQKSSEQVLRNLLNLKPNEPLVV------NYPSILKVKLQDVDVNVPVSTIA 282 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-------THDNSFPGYNTHWSF 326 NRPD+ ++L + + ++ +P+++L GS+ T DN G + Sbjct: 283 NRPDVLASLQRLQGAFKNLTATENSWFPTVTLGGSLTGSSTKFNNTSDNPVAGGVVSFD- 341 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 LP D ++++NI+ +E S + + +++TV A+ E++ ++ K L Sbjct: 342 -----LPFLDWNRVQNNIKISEESYKLAKLNYEQTVTTALNEIDTYYSTYQLSKSGYANL 396 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 Q E +K Y QG L + L E+ L K L K+ +Y A+ Sbjct: 397 QKKYEYDRKISGYYKNRYDQGISELREWLSAMNTERSSELSLLENKYTLLKNENAIYQAM 456 Query: 447 GSGY 450 Y Sbjct: 457 AGKY 460 >gi|254255367|ref|ZP_04948683.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124901104|gb|EAY71854.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 378 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/347 (23%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L N + LD+ +++DL+G+ R + N+ A A D +L V +++ Y+ R+ Sbjct: 13 LMHNRSVPLDASYEVDLWGRLRGGAQIGAQNVLQAAADRDAVRLRVATEVAGDYLTLRYV 72 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN- 229 + ++ + ++L + +++ + GA S L ++ ++ + +D+ + R N Sbjct: 73 DDDLATLARAIELRRTALDVIASRVRAGAASDLDALRASVDLDTARADLAD-SRRLRENL 131 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADS 288 V I+ L G T F + + L +P + G+P+ L+ RPD+ ++ + Sbjct: 132 VDAIAVLTGVSPTAF----DVGAASVPAALRVPDVPAGLPSALLARRPDVFAAARRADAA 187 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIR 345 ++G+A++ P+L+L G A S N+ W G + +FD GK ++ + Sbjct: 188 SLELGVARTAWLPTLTLTAQGGFASRDLGSLLDRNSSLWGLGASVAQTLFDGGKRRAAVA 247 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ + ++ T LNA+++V++AL I K+ + + AV + LS+ Y Sbjct: 248 AAQAGVELADADYRATALNALRDVQDALNDIAAQKERIARYDGAVRAADAAARLSLSRYG 307 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 G S L+++D +R V L +++ LA + V L A+G G+ P Sbjct: 308 HGYVSYLEVIDADRDALNVRRQLIHSRQALAIATVSLIRALGGGWAP 354 >gi|256424160|ref|YP_003124813.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256039068|gb|ACU62612.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 477 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 103/456 (22%), Positives = 201/456 (44%), Gaps = 52/456 (11%) Query: 34 TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVR 93 T S S + NI +KW E F D L L+ ALQ N + + I ++ I + + Sbjct: 36 TPASYNTSSDTANIAGIKWKEYFTDPYLAALIDTALQHNQELNITLQEIEISRNEIKARK 95 Query: 94 ADLFP----SSYASISH--RFIPNLKTNSTGQLD-----------------SDWKIDLF- 129 + P A + R+ ++T ++ + W+ID++ Sbjct: 96 GEYLPFVGIKGAADVEKVGRYTSQGAGDATTEIKPGKEMPDPLPNYLVAAYATWEIDIWH 155 Query: 130 ----GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 + + LA+++ V +I+++ SY + +++I Q +++ Sbjct: 156 KLHNATKAAVSRYLASVEGRNFMVT----GLIAEIANSYYELLALDNQLTIVKQNIEIQN 211 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 +E+ ++ ++L++ K EAE+ +S++ DI ++ + I+ LLG YP Sbjct: 212 NALEIVKVQKEATRVTELAVRKFEAEVLKTRSLQYDI---QQQITETENRINFLLGRYP- 267 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + F +L I+ G+P+ L+ NRPDI+ E +L + I +AK+ YP Sbjct: 268 ----QPIARNDEAFGKSLPATIHAGMPSQLLANRPDIKQAELELTAARLDIKVAKAQFYP 323 Query: 302 SLSLNGSIALTHDNSFPGY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 SL + S AL ++ P Y + +S G L P+ +K IKS A + + Sbjct: 324 SLGI--SAALGYEAFNPAYLLKTPKSLLYSIGGDLIAPLVNKNAIKSAYASANAKQIQAV 381 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ ++LNA EV N L+ + +K V + +++S ++ R +++L Sbjct: 382 YNYERSILNAYVEVANQLSKMQNLQKSYDLKSQQVAALSQGINISNDLFKSARADYMEVL 441 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R + +L ++ + VD+Y A+G G+N Sbjct: 442 LTQRDALESRFELIETQKAQMNALVDIYQALGGGWN 477 >gi|168703916|ref|ZP_02736193.1| probable outer membrane lipoprotein IbeB [Gemmata obscuriglobus UQM 2246] Length = 530 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 105/444 (23%), Positives = 197/444 (44%), Gaps = 65/444 (14%) Query: 50 LKWWESFNDTSLNKLVKIAL--QQNLTILQATERINAAKENILSVRADLFP-----SSYA 102 L E +ND L +LV L Q L IL+ E + A+ ILS R P + Sbjct: 91 LGVAEFYNDPVLTRLVDQGLVTNQELKILE--EDVQIARAEILSRRGAYLPLVGVRGTAG 148 Query: 103 SISH------------------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS 144 H R P+L + L+ +D++ + R+ S A + Sbjct: 149 MDKHSVFTPEGAAEKQLEYRPGRHFPSLPGDFQLGLNFLMPLDIWRELRN--SRDAAIQR 206 Query: 145 AYAQVD-----IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 YA V+ + +L I+ + +Y RI + +DL +++ E++ +F G Sbjct: 207 YYAAVERRNQFVTRL--IADVAETYYALMALDRRIETLDRTIDLQQRSYEIAKARFEAGR 264 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPN 258 ++L++ + +AE++ +S+ + + + ++ L+G YP +++ S F Sbjct: 265 GTELAVQRFQAEVRKNQSEKLIVAQEIVEAENRVNFLVGRYP-----QPVERNSVGF--- 316 Query: 259 LYIPIN---IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 L + IN +G+PA L++NRPDIR E +LA + + +A++ +P + + G + Sbjct: 317 LDLSINALSVGVPAQLLQNRPDIRQAEHELAAAGLDVKVARAHFFPRIDVTGFVG----- 371 Query: 316 SFPGYNTHWSFGPKLYL---------PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 + +N + F P+ ++ P+ +K I++ R A + E +Q +LNA Sbjct: 372 -YQAFNPKYIFNPEAFVTNLAGELSAPLINKAAIRAEYRAANARQLESVYNYQRVILNAF 430 Query: 367 KEVENALTSI-NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 EV N + + N K I K Q L + S+ + ++ R +++L +R + + Sbjct: 431 TEVINRMAMVSNYSKSIELKKQQITAL-EASVDAATKLFQNARVEYIEVLIAQRDQLEAQ 489 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSG 449 L KRQ + V+ Y A+G G Sbjct: 490 TVLIDTKRQQLSAIVNAYQALGGG 513 >gi|94494957|ref|ZP_01301538.1| probable outer membrane multidrug efflux lipoprotein, OMF family [Sphingomonas sp. SKA58] gi|94425223|gb|EAT10243.1| probable outer membrane multidrug efflux lipoprotein, OMF family [Sphingomonas sp. SKA58] Length = 454 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 101/433 (23%), Positives = 191/433 (44%), Gaps = 26/433 (6%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDT 59 + R + + ++LAGC++ P Y +P P+ P G + + L W + D Sbjct: 1 MTRVLIGISALMLAGCSMTPAYERPAAPV-PATLPQGEAYAPRPAGAQAGLAWTQLVQDA 59 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTN 115 L ++ AL N + A + +A+ RA P+ + ASISHR L Sbjct: 60 RLRTIIDRALANNRDLRAAIANVQSARAQYRVQRAARLPTITADAGASISHRNDARLDNY 119 Query: 116 STGQLDSDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S S ++IDLFG+ R + ES LA + A A ++ +I++ +Y Sbjct: 120 SADIGFSAFEIDLFGRVRSLTQAALESYLATEEGARAT----RIAMIAETASAYATLAAD 175 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ + +A Q ++ ++L+ G KL + + E ++ SD+ + Sbjct: 176 QDLLVLARQTQASAQRTLDLTRTLNAAGLAGKLDVHQAETIVEQAASDVAATVTQVAQDR 235 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L G P + L QS + + + G+ +D++ RPD+ E +L + A Sbjct: 236 NALDLLAGAPVEDALL---PQSLDSLISGIARVPAGLSSDILLQRPDVLQAEHQLKAANA 292 Query: 291 KIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRA 347 +G A++ ++P++SL +I + T +S G + WS P LPIF G + N+ + Sbjct: 293 DVGAARAAMFPTISLTSAIGVASTALSSLFGSDAFGWSASPSAILPIF-GGPNRGNLDYS 351 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ +++ + A +EV + L D + V + + V ++ L+ YR Sbjct: 352 KAQRDLYLAQYEKAIQTAFQEVADGLARAGTIDAQQVAQ-RRLVIASSRAYDLAEQRYRA 410 Query: 407 GRYSLLDILDIER 419 G + L L+ +R Sbjct: 411 GIDTFLTALNSQR 423 >gi|293389951|ref|ZP_06634285.1| TolC protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950485|gb|EFE00604.1| TolC protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 472 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 115/469 (24%), Positives = 215/469 (45%), Gaps = 35/469 (7%) Query: 7 IFSLFIVLLAGCTVGPEYT-KPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSL 61 + FI L A CT + + K MP QF + SKN+ I +WW+++ D L Sbjct: 11 FIAAFITLTA-CTTNVDLSSKVEMP---AQFEQTQNATTSKNIQEI--ARWWQNWRDPQL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNST 117 +L+++ LQ NL I A R+ A+ N +ADL P A + H + N T T Sbjct: 65 TRLIELGLQNNLDIEIAKARLQEAQANSRYTQADLGPKVGAQGSAGMIHSHVENPLTQRT 124 Query: 118 ---------GQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + W++D FG++R +++ A + +A QV A++ V ++ SY + Sbjct: 125 YDRSGNVQYAGITASWELDFFGKKRSDRDAAQAAVLAAQQQVYAAQMLVAGQIAESYSNI 184 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ ++ Q ++ + +F G + ++++E+ I ++++ TL Sbjct: 185 VALHQQNALLQQNETYLRRLKGYAEGRFRAGQANANDVLQVESRISAVQAQQATLNAQIA 244 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 N I+ L+G P F + K + +F L + +P+D++ RPD+R ++ Sbjct: 245 GNERAIAILIGKPPQGF--RLNKSAVDFLGVLPPAPHGVMPSDVLERRPDLRAYRAQVQA 302 Query: 288 SVAKIGIAKSDLYPS-----LSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 AK+ AK+DLYP L G I + D G+ S + LPIF G+I+ Sbjct: 303 LAAKLASAKADLYPHFEIQFLGQTGRIDINTDIPDLKGWGNLLSL--DISLPIFTNGRIQ 360 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +NI A++ + + + + +L A+ +V+N+ + + LQ A + +K + + Sbjct: 361 ANIDAADARLKAALLQYDKGLLQALADVDNSYQAQAALNRQTQLLQTACQQAQKQANNAE 420 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G +L + L + L ++ AK+ + LY A+G G+ Sbjct: 421 KLFNYGEKTLDNDLTARLTALDYQNQLIQSRLAGAKNLISLYKALGGGW 469 >gi|116689527|ref|YP_835150.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|170732831|ref|YP_001764778.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|116647616|gb|ABK08257.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] gi|169816073|gb|ACA90656.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 498 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 96/429 (22%), Positives = 193/429 (44%), Gaps = 38/429 (8%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 L W F D L KL+ ALQ N +I QA RI A I S R++L P + AS S + Sbjct: 62 ALDWANQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYS--W 119 Query: 109 IPNLKTNST-------GQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 L +++ GQ S+ W++DL+G+ R + ++++ +A A + A Sbjct: 120 TRELYSSNALFPPPYGGQWYSENNVLASASWELDLWGKNRERLHTAVSQEKAAEADMQQA 179 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ + S + +Y IA + + + +++ + + G + + I Sbjct: 180 RITLASSVARTYNSLAQLYALRDIAQREITNRETVGKITDGRVSAGLDTNVERQTARGNI 239 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + L+ + ++ LLG L N P+ + + +PADL+ Sbjct: 240 ATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLN---PSGDVTLPGNLPADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWS 325 RPDI ++ ++ + AK++ YP ++L ++F G+ Sbjct: 297 SRRPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGF---DAF-GWGKFLNFASRQAQ 352 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FGP ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Sbjct: 353 FGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQMGD 412 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDL 442 Q A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 413 AQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLAL 469 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 470 IKALGGGFD 478 >gi|261885985|ref|ZP_06010024.1| RND efflux system, outer membrane lipoprotein CmeC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 405 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 8/333 (2%) Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++IDL+G+ R +S A + D A L++ S +Y KE+ +I ++ L+ Sbjct: 60 YEIDLWGRVRDSANASEAIFKATKYDYDSAMLSIASTTANTYFMLISLKEQENILNETLN 119 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y++ + + GA +L+ + +A + S ++ + ++ +S L+G Sbjct: 120 TYEETLIYRQKELNAGAIDELTYYQAQAAVHSAKTQLIGIQTQIAQTNSALSVLVGKNLN 179 Query: 243 EFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L Y S N P + +P GI +D++ +R DI ++L S +G+A++ P Sbjct: 180 DIL-YQSIDSPNTLPTMPEVPS--GISSDVLLHRADIASSLERLKASNFLVGVARTAWLP 236 Query: 302 SLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 LSL G + D N F N + WS G + +P+ D G+ K+ + A ++++ Sbjct: 237 QLSLTGIFGFSSDEFNRFFVNNANIWSVGGSIMMPLLDFGRTKNRVELANLEQNASFLSY 296 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + V A E++ AL + +Q V+ K LS Y G + L+ LD + Sbjct: 297 DKAVKTAFGEIKTALDTRKNSVLKEQSMQDLVKSQTKVYDLSKARYDDGYSTHLEFLDSQ 356 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R + L+ +K +A S VD+Y ++G G+N Sbjct: 357 RNLLSARLSLAQSKLDVATSVVDVYKSLGGGFN 389 >gi|171317097|ref|ZP_02906300.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171097731|gb|EDT42558.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 498 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/427 (21%), Positives = 188/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ ALQ N +I QA RI A I S R++L P + AS S Sbjct: 62 ALDWANQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W +DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSSNALFPPPYGGQWYSENNALASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLAASVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 242 TQASLSDLDGQITTVRYQLAALLGKGPDRGL---QIAAPVMSPAGDVALPGNLPADLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRARLKGRYADFDLSVANYNQTLINALNDVATQVASIRAVDRQMDDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLNADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|221212843|ref|ZP_03585819.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221167056|gb|EED99526.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 512 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 176/413 (42%), Gaps = 61/413 (14%) Query: 15 LAGCTV-GPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 LAGC+ P P MP + QF +G WW Sbjct: 24 LAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGVAQQFEVGAQP------VSDWWTQ 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYAS----------- 103 + +LN LV L+ + T+ A ++AA+E + + + + L PS A Sbjct: 78 YRSDALNALVDEGLRNSPTLAAAAHSLDAAREQLRAQIGSSLLPSIDAGGQAARQRALGV 137 Query: 104 -ISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKL 160 I P L ++ GQL + + IDLFG R SLAN +D + Q++ A+ + + + Sbjct: 138 PIRALGAPTLLYDTFVGQLQASYTIDLFGAARFANRSLANRVDVSAFQLESARRALAANI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I +++ L + + GA ++ + + + +P Sbjct: 198 VTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARSDALSARQSANTFAASLP 257 Query: 221 TLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + H ++ L+G PA L +L++P + + +P+DL++ Sbjct: 258 ALRQQRDSARHALAVLVGRTPDRPPAGIALA-----------DLHLPEQVPVVVPSDLLQ 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKL 330 +RPDIR + L + A++G+A + L+P LSL+ S+ G WS G L Sbjct: 307 SRPDIRAADAALKAAAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIWSVGASL 366 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P+F G + + R A+++ +++TVL A + V ++L ++ D + + Sbjct: 367 TQPLFHGGALLAQRRAAKATYGAAVDQYRQTVLAAFQNVADSLAALEHDAQAL 419 >gi|154174168|ref|YP_001408251.1| TolC protein [Campylobacter curvus 525.92] gi|112802786|gb|EAU00130.1| TolC protein [Campylobacter curvus 525.92] Length = 448 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 206/424 (48%), Gaps = 22/424 (5%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 N KN +N+ +WW+ +N T LN+L+++ L+ N+ + ++ IN A + A+L P+ Sbjct: 32 NVKNELNLKE-EWWKDYNQTYLNELIELGLKNNIDLAKSAVAINKALAQAGVLDANLLPT 90 Query: 100 SYASISHRFIPNLKTN-------STGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDI 151 AS S + N+K N TG + +++DL+ + +S+ A + A A + D+ Sbjct: 91 FSASASAQTSRNIKRNDSWARTYGTG-ISLSYELDLW--HKIADSTDAAMWEANATKFDL 147 Query: 152 A--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 A +L+VI+ + +Y + + E I L Y + ++ KF G +LSL +++ Sbjct: 148 AAMRLSVINSITDAYFNILYLNESIKFYEISLKNYNELEAITRYKFELGKEEQLSLSQIQ 207 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + + S+++ I EKS + LL L + ++ + + +++ +P Sbjct: 208 SSVLSLKNKIENAEKSLLEAQKTLRILLNVKPDFDLKFSGLSLSDVKN---LGVDLDVPI 264 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--- 326 ++ NRPD++ ++ + + + ++ + YPS+++ S+ + DN G T F Sbjct: 265 YVVANRPDLQAAIARIEEGLLNVKASQKEFYPSITIGASLKGSADN--IGGATSLKFLDG 322 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + LP + K+KS+++ +E S ++ + + T+ A+ E++ ++ +D+ ++ Sbjct: 323 NIAINLPFLNYSKLKSSLKVSEVSFEQAKLNYMATLNEALNEIDTYYKAMQKDETLLENY 382 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V+ ++ + + Y+ G+ L D L+ V+L K +L + + +Y A+ Sbjct: 383 SKQVQNYENISEIYKLKYQYGKSELKDYLEASNNEIDAYVNLLGGKYKLLQDEIQIYKAM 442 Query: 447 GSGY 450 + Sbjct: 443 AGKF 446 >gi|238028639|ref|YP_002912870.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237877833|gb|ACR30166.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 506 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 185/423 (43%), Gaps = 26/423 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--- 105 TL W + F D L KL+ AL N TI QA R+ A I + RA L P S S Sbjct: 62 TLDWADQFGDPQLPKLIGEALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWTR 121 Query: 106 -----HRFIP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 + +P N + + + W++DL+G+ R + S+++ +A A+ + A++ Sbjct: 122 ELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNREKLRSAVSQRKAAQAEFEQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + + + Sbjct: 182 TLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ES + L+ + ++ LLG L P I + IPA+L+ Sbjct: 242 SESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPV---LHPGGAIALPDNIPANLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPD+ ++ ++ + AK++ +P ++L G A N + FGP + Sbjct: 299 RPDLVAARWQVEGAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVN 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G +++ ++ + + +T++ A+ +V + +I + + Q A++ Sbjct: 359 LPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQVAAIRAIDRQMGDAQRALD 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGS 448 ++ L+++ Y+ G L +L DI R ++ V +L + +R L + L A+G Sbjct: 419 ASTRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDL---QIGLIKALGG 475 Query: 449 GYN 451 G++ Sbjct: 476 GFD 478 >gi|113868271|ref|YP_726760.1| outer membrane efflux protein [Ralstonia eutropha H16] gi|113527047|emb|CAJ93392.1| outer membrane efflux protein [Ralstonia eutropha H16] Length = 514 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 103/477 (21%), Positives = 211/477 (44%), Gaps = 47/477 (9%) Query: 6 AIFSLFIVLLAGC----------TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 A+ ++ + +LAGC TV T LP + S++ W Sbjct: 26 ALTAVAVAVLAGCAALGNSHSTQTVADPATMATSQTLPDEHGQWPSQD--------WVAQ 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF---- 108 F D L+ LV A++ N ++ A R+ A++ + R+ L+P + I RF Sbjct: 78 FKDPQLSALVDEAVKDNPSLQAAFARVEASRAMADATRSALYPHLEFEGSLIRQRFSEKD 137 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 + + S Q+ + D +G+ R +E++L++ +A A+ ++L + + + Sbjct: 138 LFEGTPLAGSWQNQSRLQVGLSYDFDFWGKNRDALEAALSDDRAAEAESQASRLILATSI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + +A + + ELS + G +++ + + + +D+ Sbjct: 198 ARNYARLAALYAQHDVAERAIAQRSDLTELSRQRLAAGLDTQVETTQARGTVAASRTDLQ 257 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +++ + + ++ LLG L +Q+ Q +P N+ I L+ RPD+ Sbjct: 258 RVDEEIALARNQLAALLGKGPDRGLQ-IQRPVLLAQATPTLPDNLTI--GLLGRRPDLVA 314 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 ++ + I +AK + P +SL G AL N G + + GP + LPIF+ Sbjct: 315 ARWRVEAASKDISVAKKEFLPDVSLTAFAGLAALDPSNLLMGVSRTFGIGPTIRLPIFEG 374 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKS 396 GK+++N++ + + + +++A++E + +TSI DK+I T+ + A++L + + Sbjct: 375 GKLRANLKGKYAGYDIAVANYNQALVDALRETADTMTSIRSVDKQIQTQ-REALDLAEHA 433 Query: 397 MSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L+ Y+ G + L +L+ E ++ DL + L + L A+G GY Sbjct: 434 YALATTRYKAGLGTQLTVLNAESNVLQQRRLATDLQARRLDL---QMGLMKALGGGY 487 >gi|330820666|ref|YP_004349528.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] gi|327372661|gb|AEA64016.1| RND efflux system outer membrane lipoprotein [Burkholderia gladioli BSR3] Length = 493 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/335 (23%), Positives = 174/335 (51%), Gaps = 13/335 (3%) Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQI 180 D+++DL+G+ R+ ++ A ++ + D+A +L++ ++L SY+ R + + + Sbjct: 141 DYELDLWGRVRNTVAA-AKDEAQATKADLASVQLSLEAQLAQSYLQLRGLDRQTKLLNDT 199 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + +++ +L+ GA S L + + A + +S + +N H I+ L+G Sbjct: 200 VAAFQRAQQLTQRLHDAGAVSGLDVTRSTALLADAKSQLTQNLAQRALNEHAIAVLVGAS 259 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A++F + + + P+ +G+P+ L++ RPDI E+++A+S A+IG+A++ + Sbjct: 260 ASDF-----RVETSAADVVLPPVPVGVPSALLQRRPDIAAAERRVAESNARIGVARAAYF 314 Query: 301 PSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P ++L+ L + N F N WS GP + +FD G ++ + +++ E Sbjct: 315 PQITLSAQGGLQSSNYTNFFSAPNFFWSVGPSIAQYLFDGGLRRAQLDAVKAATDEAAAR 374 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ L A ++VE++LT +++ + + + + + ++++ L++ Y++G S LD++ Sbjct: 375 YRGVALAAFQQVEDSLTLLHDLGTALDQERESADAAQRAVELALTRYQRGIASYLDVVQA 434 Query: 418 ERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 + E L I RQ + V L A+G G++ Sbjct: 435 QTTALSTERSVLDIQTRQWVAN-VQLVRALGGGWS 468 >gi|317477942|ref|ZP_07937125.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] gi|316905856|gb|EFV27627.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] Length = 461 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/462 (23%), Positives = 203/462 (43%), Gaps = 39/462 (8%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ N+ + N L W E F D L L++ Sbjct: 12 ALLSSCHIYKSYDRPEDITTAGLYRDTASVNNTLAADTANFGNLPWREVFTDPQLQTLIE 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 AL N + A + A+ ++S R P S ++S + + + Sbjct: 72 QALTNNGDLRSAALNVKQAQAALMSARLAYAPMLALSPQGTVSSWDKGKATQIYSLPVTA 131 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DLFGQ +R + SL Y Q + VI+ + Y ++ I Sbjct: 132 SWQVDLFGQLLNPKRQAKVSLKQTQF-YEQA--VQTQVIAGVANMYYTLLMLDRQLQITE 188 Query: 179 QILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +++ KKN+E G T+ ++ + + + +P + +S R + + + Sbjct: 189 GTVEILKKNLETVQAMKDAGIYGTTSAAVEQSRTAYAQVMASLPDIRQSIRETENALCLM 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L PA + ++ L ++GIP L+ NRPD++ E LA S A+ Sbjct: 249 LHQPAQSIARGVLEEQQ-----LPTEFSVGIPLQLLSNRPDVKAAEMSLAASYYNTNSAR 303 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YP ++L+GS T+++ PG + G L P+F +G + +++A++ + Sbjct: 304 AAFYPQITLSGSGGWTNNSGAGIVNPGKLLASAIG-SLTQPLFYRGANIARLKQAKAQEE 362 Query: 353 EQYITWQETVLNAIKEVENA--LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + I +Q +LNA EV NA L + +DK + +Q V +++ S + + G + Sbjct: 363 QAKIQFQTALLNAGNEVSNALHLYQMEKDKAVSRTIQ--VNSARQAASDTKELFNLGTST 420 Query: 411 LLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L E++ +A++ EV + + Q + + LY A+G G Sbjct: 421 YLEVLSAEQSYLSAQLAEVSDTFSSMQ---AVISLYQALGGG 459 >gi|254245581|ref|ZP_04938902.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] gi|124870357|gb|EAY62073.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] Length = 510 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/429 (21%), Positives = 192/429 (44%), Gaps = 38/429 (8%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 L W F D L KL+ ALQ N +I QA RI A I S R++L P + AS S + Sbjct: 74 ALDWANQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSNLMPKAEASYS--W 131 Query: 109 IPNLKTNST-------GQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 L +++ GQ S+ W++DL+G+ R + ++++ +A A + A Sbjct: 132 TRELYSSNALFPPPYGGQWYSENNVLASASWELDLWGKNRERLHTAVSQEKAAEADMQQA 191 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ + S + +Y IA + + + +++ + + G + + I Sbjct: 192 RITLASSVARTYNSLAQLYALRDIAQREITNRETVGKITDGRVSAGLDTNVERQTARGNI 251 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + L+ + ++ LLG L N P+ + + +PADL+ Sbjct: 252 ATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLN---PSGDVTLPGNLPADLV 308 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWS 325 RPDI ++ ++ + AK++ YP ++L ++F G+ Sbjct: 309 SRRPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGF---DAF-GWGKFLNFASRQAQ 364 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FGP ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Sbjct: 365 FGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQMGD 424 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDL 442 Q A++ ++ L++I Y+ G L +L + A+ + +L + +R + + L Sbjct: 425 AQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLAL 481 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 482 IKALGGGFD 490 >gi|50086389|ref|YP_047899.1| putative outer membrane protein precursor [Acinetobacter sp. ADP1] gi|49532365|emb|CAG70077.1| putative outer membrane protein precursor [Acinetobacter sp. ADP1] Length = 481 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 107/474 (22%), Positives = 231/474 (48%), Gaps = 35/474 (7%) Query: 4 LRAIFSLFIV-LLAGCT-VGPE----------YTKP-HMPLLPTQFSIGNSKNLINIDTL 50 L + FSL ++ +L+GC V PE +++P L ++ + K + D L Sbjct: 16 LLSAFSLGVMGVLSGCQIVKPEPSAQLNIQAQFSQPAQYGLDAKKWETEDWKIAVPSDQL 75 Query: 51 ---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 +WW+ F DT LN+LV+ ++N +I Q + A + A P+ + + Sbjct: 76 PRGEWWQIFQDTQLNQLVEQLNRENASIAQYEAQYRQATALLNQATASTKPTVTGNTNVT 135 Query: 108 FIPNLKTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ +T L++ W+ D +G+ R++I + ++ A+++ +L++ ++L Sbjct: 136 RAKSGESATTANYNMGLNASWEPDFWGKVRQNIWVNQDKAQASEAELNSIRLSMQAQLTT 195 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SY+ ++ + L +K ++L+H ++ G + ++ + +++ ++ ++ + Sbjct: 196 SYLQWVILGFQLQSQQESLKNLQKFLQLTHNQYQAGIVASTTVDQAQSQYQTALANYTEM 255 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQ 281 + + H I+ L+G P + + K P L IP+N+ P+ +++ RPD+ Sbjct: 256 QLAQIQLQHAIAMLIGQPQDQLQLILPKTL----PVLPQIPVNL--PSSILQRRPDVAAA 309 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKG 338 E+ +A + A++G+AK ++P SL G++ N F N WS GP L +FD G Sbjct: 310 ERTMAAANAQVGVAKLAVFPDFSLGGNLGYKSSKLSNLFSAPNFIWSVGPTLAATLFDGG 369 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + +A++S +++TV++AI+ VE+ + + K V + Q ++ ++ Sbjct: 370 LRHAQTEQAKASYDASAAVYKQTVMSAIQNVEDNIAAQYLLSKEVAQEQQSLAAATRAEQ 429 Query: 399 LSMINYRQGRYSLLDILDIE--RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y+ G L++L + R +A+ V S+ +Q ++ V+L A+G + Sbjct: 430 STTNQYKAGIVGYLNVLTAQNNRLSAQNNV-WSLTSKQY-QTTVNLISAMGGSF 481 >gi|325913978|ref|ZP_08176334.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] gi|325539747|gb|EGD11387.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas vesicatoria ATCC 35937] Length = 489 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/420 (22%), Positives = 186/420 (44%), Gaps = 25/420 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASISH 106 WW + D LN L+ LQ + ++ A R+ A+ I + +AD PS YA + Sbjct: 58 WWRALGDAQLNALIGEGLQHSPSLDAADARLRQAQARIGTAQADRGPSLSVSGGYAGVQ- 116 Query: 107 RFIPN--------LKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 +P + GQL D++ +DL+G +R E+++ +A A+LN Sbjct: 117 --LPESVAGEERGGRFGGNGQLVVDFRYGVDLWGGKRAAWEAAVDTAHAAEVDAQAARLN 174 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + + +Y + +A + L +K +EL+ + + G S L L + +A + + Sbjct: 175 LSAAIAEAYAQLDYAWRLHDVADEELVRSRKTVELTQQRRSAGIDSDLQLRQAQARVPAA 234 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + + ++ + ++ LLG L + + +P N+ PADL+ R Sbjct: 235 QQQVQSAQQQIDEARNALAALLGQGPDRGLD-IARPVLGATIAAQLPSNL--PADLLGRR 291 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYL 332 PD+ ++ + I AK+ YPS ++ + + + + FG P L L Sbjct: 292 PDVVAARWRVEAADKDITTAKTRFYPSFNITALGGVVNRDMGQLLESASVFGLVAPALSL 351 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD GK+++N+ +++ + + V+ A++EV + + ++ ++ AV+ Sbjct: 352 PIFDGGKLRANLAGSDAQYDLAVADYNQKVIAALREVADQVNAVRSLEQRARAQDDAVQT 411 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G L++L ++ ++ + Q + V L A+G G+ P Sbjct: 412 ATAAFDLAEQRYRAGIGGYLEVLSVQEQLLVARQRMAGLQSQQLLASVRLQRALGGGFTP 471 >gi|298486914|ref|ZP_07004968.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158579|gb|EFH99645.1| Outer membrane protein of RND family multidrug efflux pump [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 469 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/471 (23%), Positives = 202/471 (42%), Gaps = 45/471 (9%) Query: 13 VLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDT---LKWWESFNDTSLNKLVKIA 68 LL GC + P+Y +P P+ S + + + + W F D L +L +A Sbjct: 12 ALLTGCVNLAPDYQRPEAPVSNQWLSATAGQPVASGSVPTDIDWQNFFTDKRLVRLQTLA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------------ISHRFI 109 L N + A+ + A+ RA P+ AS ISH + Sbjct: 72 LVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTSSSTSMTGKSSISHEYS 131 Query: 110 PNLKTNSTGQLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L +S +++D+FG Q +E LA ++ + ++++I+++ + Sbjct: 132 AQLGLSS-------YELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGW 180 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + +A L +K+ +L+ G +S L + + + ++S D+ + Sbjct: 181 LTLAADNQLLKLAEDTLASQQKSYDLTRNSHALGGSSGLEVAQAQTTVESARGDVAQYKS 240 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + + L+G E L + Q + + +P+ L++ RPD+ E Sbjct: 241 QILQDRNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSLLQRRPDVLSAEHS 297 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + IG A++ +PS++L GS + + F WSF P + +PIFD G + Sbjct: 298 LKAANIDIGAARAAFFPSITLTANAGSASTSLSGLFKSGTGAWSFAPSISVPIFDGGANR 357 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS L+ Sbjct: 358 ATLDSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKSYELAD 417 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 418 ALYRGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|148556071|ref|YP_001263653.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148501261|gb|ABQ69515.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 480 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 112/460 (24%), Positives = 200/460 (43%), Gaps = 39/460 (8%) Query: 20 VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN-- 72 VGP Y P P F G + WW ++D L+ LV+ AL N Sbjct: 20 VGPNYHLPEAAAVRAPEAQGAFLSGGTAATAEPLPDHWWTLYDDPLLDGLVERALAANTD 79 Query: 73 LTILQAT--------ERINAAKE-----NILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L + +A ++ A +E N+ + A S+ A + H P + + G Sbjct: 80 LRVAEANLDRSLALLDQREAGREIQGGANVETSWAQR--SAEAELQHVKPPTRQIYNAG- 136 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + +DLFG RR IE++ A+ ++A A D+ ++NV ++ +Y D + +I + Sbjct: 137 LGVSYDLDLFGGLRRGIEAASADAEAAVAARDLVRVNVAAETARAYADICNAGHQIDVLG 196 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + L ++ + L+ G + L + + +++ + +P L R + ++ L G Sbjct: 197 RAIALQERGVGLTRTLIAHGRAAPYELDRRQGLLETSRARLPRLAARQRNALLRVTALAG 256 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD----LIRNRPDIRYQEKKLADSVAKIG 293 PA Q + Q + + +PA L+R RPDIR E++LA + A+IG Sbjct: 257 AMPA-------QADAGLLQCRRPLELARAVPAGDGEALLRRRPDIRMAERRLAATTARIG 309 Query: 294 IAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +A +DLYPS+ + SI T ++F + GP L ++ ++ I E+ Sbjct: 310 VATADLYPSIRIGASIGSTGAAADAFSPLTNRFGIGP-LIDWTLNRHAARARIAATEAQG 368 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + VL A++EVE AL L A + + + + R GR + Sbjct: 369 RADLAAFDGVVLAALREVETALVGYAAGLDRQASLDRARDDAARVAAQTAQLRRGGRIAE 428 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L L+ ER E + + L + + L++A+G G+ Sbjct: 429 LPALEAERDLVAAEQAAAEGRAALNEEQIALFLALGGGWT 468 >gi|291280282|ref|YP_003497117.1| RND efflux system outer membrane lipoprotein [Deferribacter desulfuricans SSM1] gi|290754984|dbj|BAI81361.1| RND efflux system, outer membrane lipoprotein [Deferribacter desulfuricans SSM1] Length = 461 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 196/465 (42%), Gaps = 32/465 (6%) Query: 4 LRAIFSLF--IVLLAGCTVGPEYTKPHMPLLPT--QFSIGNSKNLINIDTLKWWESFNDT 59 +R +F F I+LL GC + E K + LP +F I K +WW+SF Sbjct: 1 MRVLFFYFSIILLLTGC-ITKEIPKLNNSDLPADYKFKIEGVKEY----DKEWWKSFGSD 55 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG- 118 LN L+ A + N + A + + A R LFP + + KT + G Sbjct: 56 DLNSLIIFAQKNNFDLKLAVKTVEEANLQYKKDRTALFPEIGLNAGYE---RTKTKNKGF 112 Query: 119 ----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 L + ++ID++G+ R I+ + N+ D + ++ ++++ Sbjct: 113 NTVTVNNYYLGLSASYEIDIWGKIREGIKLTELNVLEKRFDYDALFNTIAGEITTNWLNT 172 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E+ + + L L + L K+ G S L ++ +I S E+ I L+ + Sbjct: 173 LAIFEKEYLLNAKLKLLENQKRLLENKYFSGEISLKELYLIDQQIISTENAIKLLKNNKN 232 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + I LLGY + + + P + I +P +LIR RPDIR E L Sbjct: 233 IYENRIKILLGYNNIDI-----ELKDRTLPEVDFDIKTPVPLELIRLRPDIRLSEVNLMK 287 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIR 345 S A I++ + +P+ S++ S + N +W + L+ P+ D K K N Sbjct: 288 SFAAYKISRLERFPTFSISASYKYSS-NEISSIFDNWVLNIAANLFYPLIDFNKRKYNEL 346 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 + E +I +++TV A+ +VEN +I+ + ++ +K L + Y Sbjct: 347 INKIKVDESFINYKKTVYQAVVDVENGFLNISNSLSQLETTTKNLQKEEKQYQLIKLKYL 406 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G SL+D++ E ++DL K +S V Y A+G Y Sbjct: 407 SGENSLIDLISEELKLIDYKLDLIDKKLSYLESLVSFYKALGGRY 451 >gi|296161967|ref|ZP_06844767.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295887843|gb|EFG67661.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 495 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 111/478 (23%), Positives = 216/478 (45%), Gaps = 46/478 (9%) Query: 4 LRAIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 + A SL +VL + C VGP L +Q S+ K + T WW F D Sbjct: 21 MAATASLGVVLCS-CALVPNVGPAPQPEQASELASQRSLAGPK--ADWPTENWWTKFGDH 77 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFI-PN 111 L+ L+ AL + T+ QA R+ A R+ L+P+ S +S+ +I P Sbjct: 78 QLDALMAEALAHSPTMAQAEARVREAIARSQIARSALYPTIGAGASVSKEKLSYNYIFPK 137 Query: 112 LKT----NSTGQ--LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N G+ LD W++D +G+ R ++++ + + A A+L + + L +Y Sbjct: 138 TAVPRGWNDMGEVTLDFSWELDFWGKNRDALKAATSEAKATEADAAAARLLLTTTLADAY 197 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + +R + L + +L + QG ++ L A + + ++ + + Sbjct: 198 VQLQFLYDRRDVVADTLRNRQAFDQLVQRRVAQGVDARTELEDSAARVDATKAALAEANE 257 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRY 280 ++ + I+ LLG L ++ P+L + +G+P A+L+ P++ Sbjct: 258 QIQLAQNGIAALLGKGPDRGLDIVR-------PSLSLRRPVGLPDALDANLLGRIPEVVA 310 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 ++ + ++G+A+++ YP+++L G +L +N F + S GP + LPIF+ Sbjct: 311 ARWRVEAAAKRVGVARAEFYPNVNLMAFVGYQSLGLNNLFKSGSDAGSVGPAISLPIFEG 370 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE--DKKIVT--KLQHAVELH 393 G++++N R A + ++ E + A+ E +A+ S++ D+ T +L H+ E + Sbjct: 371 GRLRANYRGARAEYDFAVASYNEALTQALHETADAVRSLSALVDRSAATDSELAHSEESY 430 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ Y+ G L +L E A + + D +I R + V L A+G G+ Sbjct: 431 R----LAKERYQGGLVDYLTVLTTEDALLQARLADAAIHARGYSLD-VALVKALGGGF 483 >gi|253687769|ref|YP_003016959.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754347|gb|ACT12423.1| RND efflux system, outer membrane lipoprotein, NodT family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 456 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 28/456 (6%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + L +L AGCT+ P LP +SI + L D WW++F LN L++ Sbjct: 9 YVLMGMLCAGCTLLP-VPDDAASELPDAWSIDAASALKPPDK-GWWKAFGSQELNSLLEG 66 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYA---SISHRFIPNL--------KTNS 116 AL N ++ ++N+ R S A ++ F NL + S Sbjct: 67 ALLAN-------RNLDTVRQNMEQARIQWQSSQMAKTPEVNGAFSKNLSGVWGEHQRNKS 119 Query: 117 TG-QLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G L + D++G +R S+ A +A V L + S +I Y+ + +I Sbjct: 120 YGASLSLSYSPDVWGAKRAASYSNEALWRAASYDVSATALMLRSSVITQYLALLGIRRQI 179 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A + LD+ ++ + L K+ GA ++L L + ++ + +E + L + R ++ Sbjct: 180 VLAEKNLDISRRLLTLVETKYAAGAVARLDLAQQQSFVAGMEVMLLQLHQQSRQVSKTLA 239 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LL E + Q + P+ I G+PADL+ RPD+ E KLA + A I Sbjct: 240 ALLDKTPQELIPPSQHIEDLRMPD----IGSGLPADLMHKRPDLLSAEAKLAAAGANIDA 295 Query: 295 AKSDLYPSLSLNG--SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 A++ ++PS+SL+ S++ T N W G ++ LPI+D+ N R A + + Sbjct: 296 ARAAMFPSISLSATSSVSATGLNPLFRLAPGWGSGLEISLPIWDRSARVDNQRLALINRK 355 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 ++E +L A +VE AL ++ ++ + + S+ L+ I YR G L Sbjct: 356 IALNAYREALLTAFGDVETALHAVLNLQQQQRWQDAQLAAAQDSLRLAEIRYRAGAEDLQ 415 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L+ + E+ S +Q ++ DL +A+G Sbjct: 416 RLLNAQNVFYSAELASSTLWQQRLQAANDLAVALGG 451 >gi|225423362|gb|ACN91190.1| CmeC [Campylobacter coli] Length = 492 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 119/479 (24%), Positives = 207/479 (43%), Gaps = 54/479 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTL--KWWESFND 58 A SLFI + C++ P P +S+ N + N TL +WW+ F+D Sbjct: 11 ASLSLFI---SACSLSPNLNIPE-----ANYSLDNKLGALSWEKENNHTLSKEWWKEFDD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NLKTN 115 LN +V +ALQ N + A + A + +DL P AS + P N +N Sbjct: 63 EKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLPKLDGSASANRTKTPTNAPSN 122 Query: 116 STGQ----------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 TG LD ++IDL+G+ R +S + ++ + A+L+++S ++ +Y Sbjct: 123 RTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGFKASQYDYEAARLSIVSSVVQTY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + E + ++ ++++ KF GA + + + A ++S Sbjct: 183 FNFVNANENEKALKDAYESAQEIYQINYEKFQVGAVGEYEIAQSRANLEST----ALQYN 238 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ----PNLYIPINIGIPADLIRNRPDIRY 280 ++N N L + L+ + Q +Q + IP GI + ++ RPDI Sbjct: 239 EAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKDFDIPS--GISSTILLQRPDIGS 296 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSF--PGYNTHWSFGPKLYLPIFD 336 +KL +G+A++ P+LSL G + N+ G T WS G +PIF Sbjct: 297 SLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNTLVEAGSRT-WSIGGNFVMPIFH 355 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH----AVEL 392 G+I N+ A+ + E ++ +Q T++ A E+ AL + + +LQ+ A EL Sbjct: 356 WGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYALIA-----RKTIRLQYNNAQASEL 410 Query: 393 -HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+ +S Y G SL D L + V + K A S V++ A G G+ Sbjct: 411 SYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNTKYSYANSIVNVIKAFGGGF 469 >gi|326387015|ref|ZP_08208625.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326208196|gb|EGD59003.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 475 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 191/455 (41%), Gaps = 27/455 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LAGC VGP + +P P + + G+ WW + + ++ LV+ L + Sbjct: 20 LAGCAVGPNFHRPAAPSVASYRDGGDGAAAPGPIAGNWWHALGNAQVDALVERGLTGSPQ 79 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISH--------RFIPNLKTNS------TGQL 120 I A R+ +A+ ++ + FP + AS R + NS T L Sbjct: 80 IDAAKARLRSAEASLRAGYGAFFPQASASFDATREKYSLTRL--GVSNNSNVFSVFTPSL 137 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + +D+FG RR +E+ A + + +L + + + I F E + Sbjct: 138 SVSYLLDIFGANRRTVEALGATAVAERETLRGTQLTLAGNIATTAIARAAFHEEVEAWDA 197 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 I+ + + +H + G S + L ++++ D R ++ L+G Sbjct: 198 IVGADEVQLAAAHARTVAGTQPLSSEIVLSNQLETARIDRNAARVKARQADDTLAVLIGS 257 Query: 240 P-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P A L + +F P +P+ + P++L+R+RPDI E + A++G+A + Sbjct: 258 PPAGAGLPSLTLA--DFSPAGSVPLRL--PSELVRHRPDILVAEATAHAASAQVGVATAA 313 Query: 299 LYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + P ++L+ S T +N F WS+ + PIF+ G + + + A+++ Sbjct: 314 MLPQITLSASTGSTTNNFERLFTSGTGVWSYAAGVAAPIFEGGTLINRRKAAKATFVATM 373 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++TVL A +V +ALT+ ED A + L+ N G S D L Sbjct: 374 ADYRQTVLTAFGQVADALTANAEDGAADAAATKAFADADLAWHLAQTNAGAGLLSAAD-L 432 Query: 416 DIERAT-AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + R T + + A+ + V LY+A+G G Sbjct: 433 EAARVTWQQARIAALSARSTHLQDIVALYVALGGG 467 >gi|198283663|ref|YP_002219984.1| NodT family RND efflux system, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667276|ref|YP_002426294.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248184|gb|ACH83777.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519489|gb|ACK80075.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 515 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 108/474 (22%), Positives = 218/474 (45%), Gaps = 48/474 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIG--------------NSKNLINIDTL--KWWESFND 58 LA C+ P P P T ++ G +++ + L +WW+ F+ Sbjct: 21 LAACSFEPPLRVPQAPADKTPYTAGISPKETVAPGGPSGHAQKIAYGKELHEEWWKLFHS 80 Query: 59 TSLNKLVKIALQQNLTILQA---------TERINAA------KENILSVRADLFPSSYAS 103 +L++L+ L+ + TI QA T R NA+ N+ + R+ +++ Sbjct: 81 KALDELIATGLKNSPTIAQAQAQLKQAEATARANASIFYPQVTGNLQANRSKASAAAFGG 140 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 S F +L T S G + D+FG R + +S A + +++ A+L + ++ Sbjct: 141 -SSGFHYSLITGSVG---VSYYPDIFGVNRLVYRNSEALVKYQQWELEAARLTLTGNIVT 196 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + + +I I+ ++ +EL+ ++ GA LS+V +++ S + +P L Sbjct: 197 TAVSEAATEGQIRATRAIVAQERQLLELTENQYKAGAVDYLSVVTQRSQLASELATLPPL 256 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIR 279 ++ + H ++ L+G +PA ++Q L +P + + +P+ L++ RPDIR Sbjct: 257 KQQLAVYRHELAILVGAFPAD-----ARRQPFTLT-ELQLPEELPVSLPSQLLKQRPDIR 310 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFD 336 ++ + A IG A++ YP++ L + T + F ++ WS + PIF+ Sbjct: 311 AALSQMKAANAVIGEARAQFYPTVQLTAAFGDTASHPALFFNPVSSIWSLVGAVSQPIFE 370 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 GK+++ A ++ Y ++ TVLNA +V NAL ++ D + + + A++ ++ Sbjct: 371 GGKLEAQKAEAHAAYDAVYAAYRSTVLNAFDQVANALRAVEHDAQTLAAQRAALQAAAEA 430 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ +YR G L +L E ++ A+ Q + L +A+G G+ Sbjct: 431 LRLAQASYRAGASDYLTLLTAEVQYDNAKIAEITARSQRYQDTAALLVALGGGW 484 >gi|255016038|ref|ZP_05288164.1| putative multidrug resistance protein [Bacteroides sp. 2_1_7] Length = 480 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 206/476 (43%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE + LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELSMDERISLPESGEMGMNDTTF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFRQSMERIAMSRAALQRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + SIES + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKKEGAETQLAVDQFYARVLSIESKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E +L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMELIASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRNEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|83312530|ref|YP_422794.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] gi|82947371|dbj|BAE52235.1| Outer membrane protein [Magnetospirillum magneticum AMB-1] Length = 463 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 102/466 (21%), Positives = 197/466 (42%), Gaps = 28/466 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +A+ +L +V+L+ C+VG EY +P P P Q+ N+ WW FN L++L Sbjct: 4 KALSALALVVLSACSVGDEYVRPPAPP-PAQWKNAAQGNVWPGS--DWWRQFNSPRLDEL 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD- 123 + A N + AT R+ A + A L PS AS + ST Sbjct: 61 MARARTANFDLAAATARVRQADAQLGVAGASLLPSLSASAGETRARASRAASTTTTTKAR 120 Query: 124 ------------WKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARH 169 ++ID +G + A + ++ D+ A L S + +Y + Sbjct: 121 HTSTTSATLTASYEIDFWG-KNAAAVDAAQAAAEASRFDLQTAVLTAQSGVATTYFEILG 179 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +ERI + + + + + + + G + L + + E+ + + + + LE+ R + Sbjct: 180 LQERIRLVKESIANSEGILAVFSDRQRAGTATSLDVAQQESVLATQRATLAPLERQMRQD 239 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEKKLADS 288 + ++ L G EF + L +P+ G+P++L+ RPD++ E L + Sbjct: 240 YNALAILTGRMPEEFALVPETLGG-----LAVPVVGAGLPSELLARRPDVQSAEASLRAA 294 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIR 345 A I A++ +P++SL G + WS IFD GKI + Sbjct: 295 NADIAAARAAWFPAISLTGQGGFQSLDLLKMMTAQSLLWSVASTATQTIFDGGKIAGTVE 354 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 + + +E T+++ V +A +VENAL ++ + V + A +++ ++ Sbjct: 355 QKRARFEELSQTYRKAVASAFSDVENALIAVEMAVEEVESQRRAEATARRAFEIAQAQMA 414 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + +L+ ++ + L+ A+ ++ V LY A+G G+ Sbjct: 415 GGIVDVTTVLNTQKTLFSAQDALAQARLSQMQAIVGLYKALGGGWQ 460 >gi|329848930|ref|ZP_08263958.1| outer membrane protein oprM [Asticcacaulis biprosthecum C19] gi|328843993|gb|EGF93562.1| outer membrane protein oprM [Asticcacaulis biprosthecum C19] Length = 423 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/406 (22%), Positives = 180/406 (44%), Gaps = 13/406 (3%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASIS 105 + W + F D L + + +AL N + A + A+ RA L P S S S Sbjct: 17 ITWRQLFLDPQLQQTIDLALSNNRDLRIAALNVQQARAAYGIQRATLLPGIDASGSGSKS 76 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSY 164 H + + L W++DLFG+ R ++ ++L + ++ A D ++++I+ + ++ Sbjct: 77 HTDADGDSESYSANLGLSWELDLFGRIRSLKNAALEDFFASEANRDGVEISLIASVAEAW 136 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ ++ + ++ + ++ ++ + G L L + ++ +D+ LE Sbjct: 137 LNLAADQDALRLSRETFASRQEAYRIAEGRARIGVIGDLELSQQTTLLEQSRADVAALET 196 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + ++ L+G T + Q + IP+ G+P++++ RPD+ E Sbjct: 197 AVDQDRSALTLLVG---TTLPKNLVPQGMPDKAVADIPV--GLPSEVLLIRPDVLVAEHN 251 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A IG A++ ++PS+SL GS + + F N WS+G + LPIF G Sbjct: 252 LKAANADIGAARAAMFPSISLTGSTGFASNALGSLFDSGNGKWSYGAGVNLPIFAGGGPI 311 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R A++ + ++ + +A +V AL + + A ++S LS Sbjct: 312 NALRGAKARQEIAVAQYERAIQSAFNDVNQALAVRARIDERLDAQGAATSAAQRSFDLSQ 371 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 Y G L +LD +R + L + A + V LY AIG Sbjct: 372 ARYTAGSDGYLTLLDAQRTLYGSQQSLINLRYLRAANLVALYRAIG 417 >gi|170768806|ref|ZP_02903259.1| multidrug efflux outer membrane protein EefC [Escherichia albertii TW07627] gi|170122354|gb|EDS91285.1| multidrug efflux outer membrane protein EefC [Escherichia albertii TW07627] Length = 457 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/429 (22%), Positives = 202/429 (47%), Gaps = 32/429 (7%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +F+VLL AGC ++ P Y+ P P+ LP S G + + +W + +D L ++ Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGTQSQGKAI------SHEWQQVIHDPRLQQV 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD--- 121 V IAL N + +A I++A+ A LFP+ A++S L + + + Sbjct: 61 VTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRNRTLTSGTATSAEANG 120 Query: 122 --SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 S +++DLFG+ + + + L S + + +L +I+++ +++ +++A Sbjct: 121 SVSSFELDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALA 179 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + ++++ + G + + + + + + + + + + + ++ L Sbjct: 180 KDTMASAEHSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLA 239 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G E L +S Q +P G+ +D++ RPDI+ E L + A IG A++ Sbjct: 240 GTTLAENLIPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARA 297 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + +P++SL S + D + +H WSF P + LP+F G + +R AE+ + Sbjct: 298 NFFPTISLTASAGVGSD-ALSSLFSHGMQVWSFAPSVTLPLFTGGSNLAQLRYAEAQKRG 356 Query: 354 QYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 T+++TV +A K+V +AL T++ E + + V ++++ + + Y+ G Sbjct: 357 LIATYEKTVQSAFKDVADALARRTTLEEQRD---AQRQYVNAEQQTVDIGLRRYQVGVGD 413 Query: 411 LLDILDIER 419 L +L +R Sbjct: 414 YLTVLTAQR 422 >gi|186476482|ref|YP_001857952.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184192941|gb|ACC70906.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 515 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 99/437 (22%), Positives = 186/437 (42%), Gaps = 54/437 (12%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYA--- 102 L W F D L KL+ AL+ N +I QA RI A I + ++ L+P SY+ Sbjct: 71 ALDWANQFGDPQLPKLIAEALEGNPSIAQAQARIAKASSYIETSKSALYPKVEGSYSWTR 130 Query: 103 ---SISHRFIPNLKTNSTGQ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 S + F P + + W +DL+G+ R + +++ +A A + A++ Sbjct: 131 ELYSANALFPPPYGGTWYSENNVLASASWDLDLWGKNRERLGQAVSQEKAAEADMQQARV 190 Query: 155 NVISKLIPSY-----------IDARHFKERISIAHQILDLYKKNIELSHLKFTQG---AT 200 + + + +Y I R K R +I D + ++ + + T AT Sbjct: 191 TLAASVARTYNSLAQLYALRDIAEREIKNRQTIGAITNDRVRAGLDTNVERQTANGNIAT 250 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S+ +L +L+ +I S + + TLLG L F P Sbjct: 251 SQSNLTELDGQITSTR--------------YELGTLLGKGPDRGLQIAMPV---FDPGSA 293 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 + + +PADL+ RPDI ++ ++ + AK++ +P ++L + A Sbjct: 294 VSLPDNVPADLVSRRPDIVAARWQVEAAMHNVKEAKAEFFPDVNLAAAFGFDAFGWSKFL 353 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + FGP ++LPIFD G ++S ++ + + +T++ A+ +V ++SI Sbjct: 354 TSSSRQIQFGPAIHLPIFDAGALRSQLKGRFADFDLDVANYNQTLIGALSDVATQISSIR 413 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQ 434 + Q A++ K+ L++I Y+ G L +L ++ A + +L + +R Sbjct: 414 SIDRQAGDAQRALDASTKAYELAVIRYKAGLSPQLQVLTADQNRLAAEQTVTNLKMRRRD 473 Query: 435 LAKSYVDLYIAIGSGYN 451 L L A+G G++ Sbjct: 474 L---QFALIKALGGGFD 487 >gi|73541711|ref|YP_296231.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72119124|gb|AAZ61387.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 514 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/423 (21%), Positives = 197/423 (46%), Gaps = 29/423 (6%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHR 107 + W + F D L+ LV A++ N + A R+ A++ R+ L+P+ A I+ Sbjct: 72 MDWIDQFQDPQLHALVDEAVKDNPNLQVAFARVEASRAMADVTRSALYPTVGFSADITRE 131 Query: 108 FIPNLKTNSTGQLDSDW------------KIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 + L W + D +G+ R +E++L++ +A A+ ++L Sbjct: 132 IFSQTDLFAGTPLAGRWWNQSHLQANLSYEFDFWGKNRSALEAALSDDRAAEAESQASRL 191 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y + +A + + + LS + G +++ + + + Sbjct: 192 ILTTSIARAYARLAALYAQRDVAERAITQRQDLTSLSQQRLAAGLDTQVETTQARGTVAA 251 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +D+ +++ ++ + I+ LLG L +QK Q +P ++ I L+ Sbjct: 252 ARTDLQRIDEDIALSRNQIAALLGKGPDRGLS-IQKPVLLAQATPKLPDDLTI--GLLGR 308 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLY 331 RPD+ ++ S +I +AK++ P+++L G L ++ F G + FGP L+ Sbjct: 309 RPDLVAARWRVEASSKEIKVAKTEFLPNITLTGFAGLASLRPEDLFMGISRTMGFGPALH 368 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAV 390 LPIF+ G++++N++ + ++ +T+++A+KE + +TSI D +I T+ + A+ Sbjct: 369 LPIFEGGRLRANLKGKYARYDIAVASYNQTLVDALKETADTMTSIRSVDNQIKTQ-REAL 427 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +L + + +L+ Y+ G + L +L+ E ++ DL + L + L A+G Sbjct: 428 DLAEHAYALATTRYKAGLGTQLTVLNAESNVLQQRRLATDLQARRLDL---QMALMKALG 484 Query: 448 SGY 450 GY Sbjct: 485 GGY 487 >gi|170702406|ref|ZP_02893294.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170132680|gb|EDT01120.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 532 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/420 (21%), Positives = 178/420 (42%), Gaps = 61/420 (14%) Query: 15 LAGCT-VGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 LAGC P P MP + QF +G WW+ Sbjct: 24 LAGCAWFAPSGEPPAMPSPAHYGATPQVQQTVSAQGVAQQFEVGAQP------VPDWWKK 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---SYASISHRF--- 108 + +LN LV L+ + T+ A+ ++AA+E + + + + PS + R Sbjct: 78 YRSDALNALVDEGLRNSPTLGAASHSLDAAREQLRGQIGSSMLPSIDAGAQATRQRALGV 137 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKL 160 IP L + GQL + + +DLFG R +LA +D + Q++ A+ + + + Sbjct: 138 PIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESARRALAANI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I +++ L + + G+ S+ + + + +P Sbjct: 198 VTASITVAVLNAQIETTERLVALANDQAHDAERRHALGSASRSDALNARQSADTFAASLP 257 Query: 221 TLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + H ++ L+G PA L +L++P + + +P+DL++ Sbjct: 258 ALRQQRDSARHALAVLVGRTPDRPPADLALA-----------DLHLPEQVPVVVPSDLLQ 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 +RPDI+ + L + A++G+A + ++P LSL+ G + G + W+ G L Sbjct: 307 SRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMGKGGFSWPTMLSGAGSIWNVGASL 366 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF G + + R A+++ + +++ VL A + V ++L ++ D + + HA Sbjct: 367 SQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEALDASSHAA 426 >gi|329961686|ref|ZP_08299732.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] gi|328531558|gb|EGF58395.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides fluxus YIT 12057] Length = 464 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 112/473 (23%), Positives = 201/473 (42%), Gaps = 41/473 (8%) Query: 4 LRAIFSLFIV--LLAGCTVGPEYTKPHM----PLLPTQFSIGNS--KNLINIDTLKWWES 55 ++ I L LL+ C + Y +P L S+ ++ + N L W E Sbjct: 1 MKKILCLMCATALLSSCHIYKSYDRPEDINADGLYRDTASVNDTLAADTANFGNLPWREV 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F D L L++ AL N + A + A+ ++S R P S ++S Sbjct: 61 FTDPQLQILIEQALANNADLRNAALNVKQAQAALMSARLAYAPMLGLSPQGTVSSWDKGK 120 Query: 112 LKTNSTGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + + W+IDLFGQ +R+ + SL Y Q + VI+ + Y Sbjct: 121 ATQTYSLPVTASWQIDLFGQLLNPKRNAQVSLKQTQF-YEQA--VQTQVIANVANMYYTL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ I +D+ K+N+E G T+ ++ + + + +P + +S Sbjct: 178 LMLDRQLQITEGTVDILKRNMETVEAMKDAGIYGTTSAAVEQSRTAYAQVMASLPDIRQS 237 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEK 283 R + + +L PA QK S +P ++GIP L+ NRPD++ E Sbjct: 238 IRETENALCLMLNQPA-------QKISRGLLEAQQLPTEFSVGIPLQLLSNRPDVKAAEM 290 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGK 339 LA A++ YP ++L+GS T+ PG + G L P+F +G Sbjct: 291 SLASRYYNTNSARAAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGT 349 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +++A++ ++ I +Q ++LNA EV NAL + V +K+ Sbjct: 350 NIARLKQAKAQEEQAKIQFQTSLLNAGNEVSNALYQYQMTAEKAASRDIQVNSARKAAED 409 Query: 400 SMINYRQGRYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++ G + L++L E++ +A++ EV + A Q + V LY A+G G Sbjct: 410 TKELFKLGTSTYLEVLSAEQSYLSAQLSEVSDTFASMQ---AVVSLYQALGGG 459 >gi|188996258|ref|YP_001930509.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurihydrogenibium sp. YO3AOP1] gi|188931325|gb|ACD65955.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfurihydrogenibium sp. YO3AOP1] Length = 461 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 101/394 (25%), Positives = 177/394 (44%), Gaps = 42/394 (10%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------- 99 ID WW+SFND +LN V +AL+ N L A + I +K +L + LFP+ Sbjct: 48 IDVQHWWKSFNDETLNYYVDLALKNNPNYLIALKNIELSKAYVLENSSALFPNFNLNGSE 107 Query: 100 SYASISHRFIPNLKTNSTG-------QLDSDWKIDLFGQ-----RRHIESSLANLDSAYA 147 + +S R PN + ST + + ++IDLF + R + E N+ A Sbjct: 108 TRQKVSQR-TPNGRFFSTTPYTTYNLSVSASYEIDLFAKALNAYRYYKE----NVKITEA 162 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q K +I + +Y I I + L + K+N+E+ K+ G S ++ + Sbjct: 163 QAKAIKNALIMNTVNNYFQIIENGLYIDILEEQLRIAKENLEILETKYKAGVVSYQNIDQ 222 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-- 265 + I+S+E + + + + ++ + LLG EF F + IP I Sbjct: 223 AKISIQSLEQTLQSYKNQRSILINAFAYLLGKYPEEF---------KFSASGDIPKEIKL 273 Query: 266 --GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGY 320 IP+ ++ RPDI+ + + + IA ++ +PS +L GS N Sbjct: 274 PEAIPSTVMTERPDIQEAISNVIANDYEKKIALANFFPSFNLTGSYGFQSKQLSNLITQP 333 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + W+FG + PI + K N + +E + + I +++TVLNA +EV++A++ DK Sbjct: 334 SVAWNFGLNIIEPILNWNKNIGNYKASEIALAKSIINYRQTVLNAFREVDDAISQYKTDK 393 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQG--RYSLL 412 L+ + +++ NY+ G YS+L Sbjct: 394 LNYKNLKIIYQNTYDQYEIALANYKAGIIPYSIL 427 >gi|313200877|ref|YP_004039535.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. MP688] gi|312440193|gb|ADQ84299.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. MP688] Length = 533 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 100/438 (22%), Positives = 193/438 (44%), Gaps = 56/438 (12%) Query: 10 LFIVLLA-------GCT----VGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLKWWES 55 LF VLLA GC + P+ T + Q +GN S I WW+ Sbjct: 40 LFAVLLACSLISLPGCVSMRGINPQATT----VQANQLDLGNTVISAASIEWPNAAWWKD 95 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--------R 107 ++D L+ LV + N + A RI A+ S+ A P+ + + Sbjct: 96 YHDAQLDALVTRTIADNPDLKAAQARIGLAQAYADSMHAQTLPTLSGDTTMTRERFTELQ 155 Query: 108 FIP-------NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISK 159 FIP + +T L D +DL+G+++ + ++L ++ A+ +L +++ Sbjct: 156 FIPAPWAGHTDWNNRATASLAYD--LDLWGKQKGMWAAALDETHASAAETQQVQLELVNA 213 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNI-ELSHL------KFTQGATSKLSLVKLEAEI 212 ++ SYI R+ +Q+ D+ ++++ E+ H + G T++L++ + E + Sbjct: 214 VVRSYI-------RLGFEYQLRDIAEEHVREVEHRVAIARRALSAGLTTELAVTETEVPL 266 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +E + + ++ L G H +Q+ ++ + +P + PA+LI Sbjct: 267 PMARMKVQQIEARIALIQNQLAALSGQGPGAGEH-IQRPVLHYDAAIGLPDQL--PANLI 323 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPS---LSLNGSIALTHDNSFPGYNTHWSFGPK 329 RPDI ++ S I AK++ YP+ L+ G AL F GP Sbjct: 324 GRRPDILASRWRIEASREYIASAKANFYPNINLLAFAGFQALGFGKLFTNAAAIAGVGPA 383 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G+ ++N+ +S + TVL A++ + N L +N + + + + A Sbjct: 384 ISLPIFDGGRRRANLSAQTASYDMAVEHYNATVLKALESISNQLVLLNANAREIKNAEEA 443 Query: 390 VELHKKSMSLSMINYRQG 407 + +K+ +L++ +Y+ G Sbjct: 444 LATAEKAHALALRHYKAG 461 >gi|225423372|gb|ACN91198.1| CmeC [Campylobacter coli] Length = 492 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 119/479 (24%), Positives = 207/479 (43%), Gaps = 54/479 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTL--KWWESFND 58 A SLFI + C++ P P +S+ N + N TL +WW+ F+D Sbjct: 11 ASLSLFI---SACSLSPNLNIPE-----ANYSLDNKLGALSWEKENNHTLSKEWWKEFDD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NLKTN 115 LN +V +ALQ N + A + A + +DL P AS + P N +N Sbjct: 63 EKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLPKLDGSASANRAKTPTNAPSN 122 Query: 116 STGQ----------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 TG LD ++IDL+G+ R +S + ++ + A+L+++S ++ +Y Sbjct: 123 RTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGFKASQYDYEAARLSIVSSVVQTY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + E + ++ ++++ KF GA + + + A ++S Sbjct: 183 FNFVNANENEKALKDAYESAQEIYQINYEKFQVGAVGEYEIAQSRANLEST----ALQYN 238 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ----PNLYIPINIGIPADLIRNRPDIRY 280 ++N N L + L+ + Q +Q + IP GI + ++ RPDI Sbjct: 239 EAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKDFDIPS--GISSTILLQRPDIGS 296 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSF--PGYNTHWSFGPKLYLPIFD 336 +KL +G+A++ P+LSL G + N+ G T WS G +PIF Sbjct: 297 SLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNTLVEAGSRT-WSIGGNFVMPIFH 355 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH----AVEL 392 G+I N+ A+ + E ++ +Q T++ A E+ AL + + +LQ+ A EL Sbjct: 356 WGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYALIA-----RKTIRLQYNNAQASEL 410 Query: 393 -HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+ +S Y G SL D L + V + K A S V++ A G G+ Sbjct: 411 SYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNTKYSYANSIVNVIKAFGGGF 469 >gi|270261299|ref|ZP_06189572.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] gi|270044783|gb|EFA17874.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] Length = 454 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 99/459 (21%), Positives = 203/459 (44%), Gaps = 19/459 (4%) Query: 1 MNILRAI-FSLFIVLLAGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFN 57 M IL I L +L GC + +Y P + ++ + D W F+ Sbjct: 1 MKILTPIALCLATLLSTGCGNALKSDYQTPQVNYPAHWQESADAAGPVPFD----WRDFH 56 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK---- 113 D L++ ++ + N + A R+ A+ V P A+++ L Sbjct: 57 DPQLDRWLQQVMAGNNDLAAAALRVYRAQLEAQRVGISTAPGVTATLNSSANTALSDSSP 116 Query: 114 --TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +S+ L +++DL+G+ R +++ + + + A+L +++ +Y Sbjct: 117 WNKSSSANLGVSYEVDLWGKLARQRDAAEWSRQATQQDLQSARLALLASASKNYWRVGFI 176 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +RI + Q + ++ + L + ++ G+ S L +V E + + E+ + ++ + Sbjct: 177 NQRIDVNRQSIAYARQTLRLVNARYRAGSVSSLDVVDAEQNLINQENTQLAQLRERQLAL 236 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + LLG P + + P IN GIP +++R+RPDI +E +L +++A Sbjct: 237 NEQTLLLGAPPGNAVIAPARLPMGRLPQ----INAGIPVNVLRHRPDIHAKELRLREALA 292 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 + + ++ YP+ SL GS+ + N S G L LP + ++ +I+ A S Sbjct: 293 NVDVKRTQYYPAFSLTGSLGASSTALLEFLRNPMASAGAGLSLPFLEWRQMNVDIKIARS 352 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + + +++ + A+ +V+NAL+ + +LQ A+ L +KS L+ I YRQG Sbjct: 353 DYELRVLEFKQALYKAMADVDNALSLRTQLMAQEQQLQTALALARKSERLNEIRYRQGAV 412 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S+ LD + E+ L + ++ +Y+ G Sbjct: 413 SITFWLDAQNRRRLAELALDENRFDQYQNLAQIYLEFGG 451 >gi|94313240|ref|YP_586449.1| NodT family outer membrane lipoprotein [Cupriavidus metallidurans CH34] gi|93357092|gb|ABF11180.1| RND efflux system, outer membrane lipoprotein, NodT family [Cupriavidus metallidurans CH34] Length = 504 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 107/473 (22%), Positives = 210/473 (44%), Gaps = 34/473 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMP---LLPTQFSIGNS--KNLINIDTLKWWESFND 58 L A+ ++ +LAGC Y H LPTQ + S + W F D Sbjct: 30 LLALSTIVAAVLAGCA---NYAGIHSDKEMALPTQIATAQSLPSEGGHWPATDWASQFGD 86 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR-----FIP 110 L L+ AL + +I +A RI AA S A+ P + Y+ R FIP Sbjct: 87 AQLKALIDEALAGSPSIDKARARIAAAVAFSESANANTLPQVGAGYSWTRQRLTESTFIP 146 Query: 111 -----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 ++ + + + +++DL+G+ R + S+++ + A+ + +L++ + SY Sbjct: 147 PAFAGTWQSENKAIISASYELDLWGKNREALRSAVSMVHMTEAEAEQVRLSLSQAIARSY 206 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + IA + ++ + ++ + G + + EA + + + + LE Sbjct: 207 NELARLYALLDIARDEVTQREEVLRVTRGRVRMGLDTAVEQQTAEANLAAAQVSVSALEG 266 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 S + + + LLG L + K + +++P N+ PADL+ RPDI + Sbjct: 267 SIQRTRYQLGALLGKGPDRGL-AIAKPALGGSEEIHLPDNL--PADLLARRPDIVAARWR 323 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-----SFGPKLYLPIFDKGK 339 + + I +AK++ YP ++L+ +I L D G H S GP ++LPIFD G Sbjct: 324 VEATTHDIKVAKAEFYPDINLSAAIGL--DAFGWGRFLHAASRTVSAGPAIHLPIFDGGA 381 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMS 398 +++ ++ + + +T++ A+ +V L+ I D +I+ ++ E +++++ Sbjct: 382 LRAQLKGRYADFDFAVANYNDTLIQALTDVATQLSDIRSVDAQIINAVR-TDEAAQRALN 440 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+M YR G + L +L+ + ++ + Q + L A+G GY Sbjct: 441 LAMAQYRAGLTTQLTVLNAQTTALASSQTVTTLRMQRRDRQIALAAALGGGYT 493 >gi|190573531|ref|YP_001971376.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] gi|190011453|emb|CAQ45071.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] Length = 476 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 103/418 (24%), Positives = 182/418 (43%), Gaps = 37/418 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D LN+LV AL N + A + ++ L+P +S + Sbjct: 72 WWTGFGDERLNRLVAQALAANSDLAAAGLAVQRSRLQAGLASNALWPQPSSS----GVSG 127 Query: 112 LKTNSTGQLDS-----------DWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVIS 158 + +T Q D W++DL+G R + +A ++ ++ D L VI Sbjct: 128 NASRATDQADDWRRSYSTGVSLGWEVDLWG-RLRTQRDIARWEAEASEEDRQNTALLVIG 186 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 I Y + + + I+ L+ ++ +L +F GA S+L + + ++S S Sbjct: 187 DTITQYWNLAYLNQSIATGQANLERLERTRDLVQARFDAGAVSRLEVRQALQNLQSQRSS 246 Query: 219 IPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 LE+ R+ V N T+L G P + Q + + IN G+PA+L+ RP Sbjct: 247 QSALEQQ-RVEVRNALTVLLDGTPWPQ-----QDEPQDLLGARSPGINEGLPAELLGRRP 300 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPI 334 D+R E +L +S+ I + + YP+LSL GS+ + S N + G L LP Sbjct: 301 DLRAAELRLRNSLKTIKVTATQYYPALSLTGSLG-SSATSLGDVLRNPVATLGAGLSLPF 359 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ----HAV 390 + + + + A +S Q ++ T+ A+ EV+NAL++ + + V Q AV Sbjct: 360 LNLQRAQLDTDIAGTSYQIAATNFRRTLYTALSEVDNALSAREQLARQVAASQASYDEAV 419 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 E+ + + YR G L L+ ++ E+ L+ ++ + V L+ A+G Sbjct: 420 EVERA----QEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQGQLNNDVTLFKALGG 473 >gi|206560175|ref|YP_002230939.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] gi|198036216|emb|CAR52112.1| multidrug efflux system outer membrane protein [Burkholderia cenocepacia J2315] Length = 521 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 61/413 (14%) Query: 15 LAGCT-VGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 LAGC P P MP + QF +G WW+ Sbjct: 24 LAGCAWFAPSGEPPAMPAPAHYGAAPQVQQTVSAHGVAQQFEVGAQP------VPDWWKQ 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--- 108 + +LN LV L+ + T+ A+ ++AA+E + + + + PS A + R Sbjct: 78 YRSDALNALVDEGLRNSPTLSAASHSLDAAREQLRGQIGSSMLPSIDAGGQATRQRALGV 137 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKL 160 IP L + GQL + + +DLFG R +LA +D + Q++ A+ + + + Sbjct: 138 PIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESARRALAANI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I +++ L + + G+ S+ + + + +P Sbjct: 198 VTASITVSVLNAQIDTTKRLVALANDQAHDAERRHALGSASRGDALNARQSADTFAASLP 257 Query: 221 TLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + H ++ L+G PA L +L++P + + +P+DL+R Sbjct: 258 ALRQQRDSARHALAVLVGRTPDRPPADLALT-----------DLHLPEQVPVVVPSDLLR 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 +RPDI+ + L + A++G+A + ++P LSL+ G + G W+ G L Sbjct: 307 SRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMGKGGFSWPTMLSGAGAIWNVGASL 366 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 PIF G + + R A+++ + +++ VL A + V ++L ++ D + + Sbjct: 367 SQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEAL 419 >gi|119898627|ref|YP_933840.1| putative outer membrane efflux protein [Azoarcus sp. BH72] gi|119671040|emb|CAL94953.1| putative outer membrane efflux protein [Azoarcus sp. BH72] Length = 487 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 112/466 (24%), Positives = 211/466 (45%), Gaps = 35/466 (7%) Query: 7 IFSLFIVLL-AGCTVGPEYTKPHMPLLPTQFSIGNSKNL-INID---TLKWWESFNDTSL 61 +F L LL GC +GP++ P + LP F + + D T WW + D L Sbjct: 6 VFVLAAALLVGGCALGPDFRAPDV-ALPATFRAAEGWQVAVPQDMPATGDWWTRYRDPLL 64 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-- 119 ++L+ NL + A R A RA+ P+ A ++ ++S+ Sbjct: 65 DQLLARLNADNLEVAAAAARYREALAFARGTRANALPTLDAGLAGSRSRTAASDSSSDPA 124 Query: 120 --------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L S W+IDL+G+ R+ E+ + ++ A + +L + + L Y+ R Sbjct: 125 ARNLQRFSLTSRWEIDLWGRLARNTEADRHDAAASGADLAALRLALQATLAQDYLQLRVI 184 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + + Y++++E++ + G S + + E +++S E+ L+ Sbjct: 185 DAQQRLYQRTVATYRRSLEITTNRHRAGVASLAEVAQAETQLRSAEAQGIDLQLQRARLE 244 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H I+ L+G ++ ++ + P L P+ PA++++ RPD+ +++A A Sbjct: 245 HAIAVLVGSAPSQ----LRIEPVAAVPEL-PPLPAAQPAEVLQRRPDVAAALRRVAAGNA 299 Query: 291 KIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG A++ +P+L L+ S H+ + F + WS GP L +FD G ++ +A Sbjct: 300 RIGAAEAAFFPTLVLDASAGYQHERLADLFALPHRFWSLGPTLAQHLFDGGARRAARDQA 359 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSLSMIN-- 403 E++ +++TVL+A +E E++L + D++ V A + L+ N Sbjct: 360 EAAYDRSVADYRQTVLDAFREAEDSLAGLRILGDERQV----QAAATRAANEFLAQTNNQ 415 Query: 404 YRQGRYSLLDILDIERATAKVE-VDLSIAKRQLAKSYVDLYIAIGS 448 Y G S L++ + A E L + RQLA S V+L A+G Sbjct: 416 YLAGTVSYLNVAIAQAAALTAERASLDLLGRQLAAS-VELVRALGG 460 >gi|256842061|ref|ZP_05547566.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256736377|gb|EEU49706.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 480 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 206/476 (43%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE + LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELSMDERISLPESGEMGMNDATF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFRQSMERIAMSRAALQRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + SIES + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKKEGAETQLAVDQFYARVLSIESKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E +L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMELIASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRNEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|330897354|gb|EGH28773.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 468 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 208/465 (44%), Gaps = 35/465 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSQWLPATAGQPAASGSVPTD-IEWQNFFIDNRLVRLQNL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNSTG------- 118 AL N + A+ + A+ RA P+ AS S H P+ T+ TG Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGPHTRTPS-STSMTGKSSISHE 129 Query: 119 ---QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 130 YSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAA 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 186 DNQLLKLAEDTLASQQKSYDLTRNSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQD 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + + L+G E L + Q + + G+P+ L++ RPD+ E L + Sbjct: 246 RNALRLLVGSDLPEELLPDADMQSVAQ---LVQVPDGLPSSLLQRRPDVLSAEHTLKAAN 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 303 IDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGANRATLDS 362 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ +R Sbjct: 363 AKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALHRG 422 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 423 GSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 467 >gi|295681210|ref|YP_003609784.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295441105|gb|ADG20273.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 487 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 88/401 (21%), Positives = 184/401 (45%), Gaps = 46/401 (11%) Query: 18 CTVGPEYTKPHMP--------LLPTQ-FSIGNSKNLINIDTL---KWWESFNDTSLNKLV 65 C+ GP P MP P++ + G ++ +WW + +L+ V Sbjct: 21 CSFGPSGEPPAMPSPGHYGAEAQPSKTVAAGGVAQTFDVGAAPVPQWWRLYRSDALDAFV 80 Query: 66 KIALQQNLTILQATER-INAAKENILSVRADLFPSSYASISHR---------FIPNLKTN 115 L+ N L AT+R + +A+E + RA + S+ SI +P L Sbjct: 81 DEGLR-NSPTLAATQRTLASAREEL---RAQIGASTLPSIDGAAQVERARTPIVPGLGPE 136 Query: 116 S------TGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 GQ+ + + DLFGQ R++ S S A ++ +++ ++ + + ++ + I+ Sbjct: 137 QVQYNFFAGQIFTHYTFDLFGQTRYMNSASAARVNVQAFELEASRRALAANIVGTAINVA 196 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +I++ +++ + ++T G+ S+ ++ + +I + +P+L + Sbjct: 197 ALDRQIALTERLVVVSDDAANEDQQRYTLGSASRAQALESKQSAAAIAATLPSLRQQRAC 256 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 +H ++ L+G + + +S L +P + + +P+DL+R+RPDI + + Sbjct: 257 AIHALAVLMGRTPDDAPSVPELES------LSLPQHLPVAVPSDLLRSRPDIEAADAAVK 310 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDKGKIKS 342 + A +G A + ++PSLSL S+ N +P G W+ G L PIF G + + Sbjct: 311 AAAADVGAATAQMFPSLSLTASMGRGGFN-WPAVTSGAGALWAIGAGLSQPIFHGGALFA 369 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 R + + + ++ TVL+A ++V N+L +++ D + + Sbjct: 370 QRRASVDAYDAAVLHYKATVLSAFQDVANSLAALDNDAQTL 410 >gi|237723732|ref|ZP_04554213.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437943|gb|EEO48020.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 457 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 193/424 (45%), Gaps = 35/424 (8%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 NI L W E F D L +L++ L+ N + A R+ A+ +LS + PS +A Sbjct: 47 NIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQWRVKEAEAAMLSAKLAYLPS-FALSP 105 Query: 106 HRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 + Q + + W+ID+FG+ R+ + + A L+ + + +I+ Sbjct: 106 QGTASSFDKGKAAQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRTQLIAG 165 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y +++I+ + +K+ ++ + G ++ ++ ++EA +I + I Sbjct: 166 IANTYYTLLMLDNQLAISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSI 225 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS---NNFQPNLYIPINIGIPADLIRNRP 276 L++ +++S LL P H +++ +++ + P+ GIP ++ NRP Sbjct: 226 LDLKEQINQVENSLSLLLAEPP----HAIKRTGTWDSSYMLKEHFPV--GIPVQMLANRP 279 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYL 332 D+R E+ L + A+S YPS+ L+GS T+ PG + L Sbjct: 280 DVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGSMIVNPGKFIATAVA-SLTQ 338 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDK-----KIVTK 385 P+F+KG + ++ A++ +E +++Q+ +LNA EV AL DK K + Sbjct: 339 PLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSAYYDKQINS 398 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L A+E S SL M + G + L++L ++ E+ + + ++LY A Sbjct: 399 LNKALE----STSLLM---QHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQA 451 Query: 446 IGSG 449 +G G Sbjct: 452 LGGG 455 >gi|325519605|gb|EGC98955.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 493 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 95/429 (22%), Positives = 194/429 (45%), Gaps = 38/429 (8%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF 108 +L W F D L KL+ AL+ N +I QA R+ A I S RA+L P + AS S + Sbjct: 57 SLDWASQFGDPQLPKLIDEALEGNPSIAQAQARLAKASSYIESSRANLLPKAEASYS--W 114 Query: 109 IPNLKTNST-------GQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 L +++ GQ S+ W++DL+G+ R + ++++ +A A + A Sbjct: 115 TRELYSSNALFPPPYGGQWYSENNVLASASWELDLWGKNRERLHTAVSQEKAAEADMQQA 174 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ + S + +Y IA + + + +++ + + G + + I Sbjct: 175 RITLASSVARTYNSLAQLYALRDIAQREIANRQTVGKITDGRVSAGLDTNVERQTARGNI 234 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++ + L+ + ++ LLG L Q + P + + IPADL+ Sbjct: 235 ATTQASLSDLDGQITTVRYQLAALLGKGPDRGL---QIAAPVLSPGGDVALPGNIPADLV 291 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWS 325 RPDI ++ ++ + AK++ +P ++L ++F G+ Sbjct: 292 SRRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQ 347 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FGP ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Sbjct: 348 FGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQMDD 407 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDL 442 Q A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 408 AQRALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLAL 464 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 465 IKALGGGFD 473 >gi|103488590|ref|YP_618151.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingopyxis alaskensis RB2256] gi|98978667|gb|ABF54818.1| RND efflux system, outer membrane lipoprotein, NodT [Sphingopyxis alaskensis RB2256] Length = 475 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 111/476 (23%), Positives = 212/476 (44%), Gaps = 46/476 (9%) Query: 7 IFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 + + + LLAGC +GP + L + S+ + ++ WW+ F DT L+ Sbjct: 7 VTTAVLGLLAGCASVPDLGPRPVEAAPGSLVSSASLAAAPGAWPVE--GWWQGFGDTQLD 64 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA-------------SISHRFI 109 +L+ L + + A R+ AA+ A L P A I +F+ Sbjct: 65 RLIAEGLAGSPDVAIAAARVRAAEALAQQAGAALLPRVGAEAGAGGVQQSRNMGIPPQFV 124 Query: 110 PNLKTNSTGQLDS--DWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYI 165 P+ TG + + + +DL+G+ R ++ + + A+VD A +L + + + +Y Sbjct: 125 PD-GVRDTGHVAATFGFDLDLWGRNRAALAAATSE-AEAARVDAAQARLMLATGIAAAYA 182 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D + + + +A + + + L+ + G ++ + + E+ S +D+ LE++ Sbjct: 183 DLAGYYDALDVASEAVRVRSATARLAADRARAGLENQANQRQAESRAASATADVVALEEA 242 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H I+ L+G L + Q +P L +P N GI DLI RPDI + Sbjct: 243 IAATRHRIAALVGAGPDRGLSITRPQMR--RPTLGLPENAGI--DLIGRRPDIVAARLRS 298 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + +I +A++D YP++SL+ + L N F + + S G + LPIF+ G++ Sbjct: 299 EAAAKRIDVARADFYPNISLSALVGLQSLGLSNLFDAGSEYGSGGAAISLPIFEGGRLSG 358 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R A + + T+++A+++V + + S ++ + + A+E ++ L+ + Sbjct: 359 RYRGARADYDGAIAAYDRTLIDALRDVADIVASRAATERQLAGRRAALEAAAEASKLANL 418 Query: 403 NYRQGRYSLLDILDIE-------RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G + ++ L E RA +E RQLA + L A+G GY Sbjct: 419 RYRAGLANQIEQLTAEDSMIALNRAVTDLEA------RQLALD-IALIRALGGGYQ 467 >gi|57168505|ref|ZP_00367638.1| multidrug efflux pump channel protein, putative [Campylobacter coli RM2228] gi|305432921|ref|ZP_07402079.1| RND efflux system, outer membrane protein CmeC [Campylobacter coli JV20] gi|57020010|gb|EAL56687.1| multidrug efflux pump channel protein, putative [Campylobacter coli RM2228] gi|225423367|gb|ACN91194.1| CmeC [Campylobacter coli] gi|225423377|gb|ACN91202.1| CmeC [Campylobacter coli] gi|304444075|gb|EFM36730.1| RND efflux system, outer membrane protein CmeC [Campylobacter coli JV20] Length = 492 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 119/479 (24%), Positives = 206/479 (43%), Gaps = 54/479 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTL--KWWESFND 58 A SLFI + C++ P P +S+ N + N TL +WW+ F+D Sbjct: 11 ASLSLFI---SACSLSPNLNIPE-----ANYSLDNKLGALSWEKENNHTLSKEWWKEFDD 62 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP-NLKTN 115 LN +V +ALQ N + A + A + +DL P AS + P N N Sbjct: 63 EKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLPKLDGSASANRAKTPTNAPNN 122 Query: 116 STGQ----------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 TG LD ++IDL+G+ R +S + ++ + A+L+++S ++ +Y Sbjct: 123 RTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGFKASQYDYEAARLSIVSSVVQTY 182 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + E + ++ ++++ KF GA + + + A ++S Sbjct: 183 FNFVNANENEKALKDAYESAQEIYQINYEKFQVGAVGEYEIAQSRANLEST----ALQYN 238 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ----PNLYIPINIGIPADLIRNRPDIRY 280 ++N N L + L+ + Q +Q + IP GI + ++ RPDI Sbjct: 239 EAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKDFDIPS--GISSTILLQRPDIGS 296 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSF--PGYNTHWSFGPKLYLPIFD 336 +KL +G+A++ P+LSL G + N+ G T WS G +PIF Sbjct: 297 SLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNTLVEAGSRT-WSIGGNFVMPIFH 355 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH----AVEL 392 G+I N+ A+ + E ++ +Q T++ A E+ AL + + +LQ+ A EL Sbjct: 356 WGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYALIA-----RKTIRLQYNNAQASEL 410 Query: 393 -HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +K+ +S Y G SL D L + V + K A S V++ A G G+ Sbjct: 411 SYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNTKYSYANSIVNVIKAFGGGF 469 >gi|295133805|ref|YP_003584481.1| outer membrane efflux family protein [Zunongwangia profunda SM-A87] gi|294981820|gb|ADF52285.1| outer membrane efflux family protein [Zunongwangia profunda SM-A87] Length = 494 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 100/446 (22%), Positives = 203/446 (45%), Gaps = 44/446 (9%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 NS + + ++ W F+D +L L+ AL+ N + + + A+ + + + + PS Sbjct: 57 NSADTTSSASIDWKTFFDDPNLIALIDTALENNQELNIMLQELKVAQSEVQARKGEYLPS 116 Query: 100 ----SYASISH-------------------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIE 136 + A + + P+ + L++ W++D++ + + + Sbjct: 117 IGLKAGAGVDKVGKYTRDGAVEENLEIKEGKAFPDPLPDYMIGLNAQWEVDIWNKLHNAK 176 Query: 137 -SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 S++ S+ + N+I+++ SY + ++ I +++ ++ + L+ Sbjct: 177 KSAVMRYLSSVEGRNFMVTNLIAEIANSYYELLALDNQLQIVKNNIEIQERAYRIVKLQM 236 Query: 196 TQGATSKLSLVKLEAEI---KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQ 251 ++L++ K AE+ KS++ DI ++ + ++ L+G YP + + Sbjct: 237 QAARVTQLAVSKFNAEVLHTKSLQYDI---QQRITETENKLNFLVGRYP-----QPIARS 288 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + F L I+ G+PA L++NRPDIR E +L S I +AK+ YPS ++ +I Sbjct: 289 TEAFATILPKQIDAGLPAQLLQNRPDIRQAEFELQASKLDIKVAKARFYPSFGISANIGY 348 Query: 312 THDNSFPGY--NTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 N P Y NT +S L P+ ++ IK+ + A + + +++TVL A Sbjct: 349 QAFN--PDYLLNTPESLIYSVAGDLVAPLVNRNAIKAAYKTANAKQIQAAFDYEQTVLKA 406 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 EV N L+ I+ KK V+ +S+ +S +R R +++L +R + + Sbjct: 407 YIEVANQLSKIDNLKKSYDLRAAEVDALTESIKISNKLFRNARAEYMEVLMTQRDALESK 466 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYN 451 DL K Q + V++Y A+G G+N Sbjct: 467 FDLVETKMQQMTAVVNMYQALGGGWN 492 >gi|262384317|ref|ZP_06077452.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294020|gb|EEY81953.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 480 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 205/476 (43%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE + LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELSMDERISLPESGEMGMNDTTF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFRQSMERIAMSRAALQRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + SIES + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKKEGAETQLAVDQFYARVLSIESKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMGLIASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRNEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|148358158|ref|YP_001249365.1| outer membrane efflux protein [Legionella pneumophila str. Corby] gi|296105516|ref|YP_003617216.1| outer membrane efflux protein [Legionella pneumophila 2300/99 Alcoy] gi|148279931|gb|ABQ54019.1| outer membrane efflux protein [Legionella pneumophila str. Corby] gi|295647417|gb|ADG23264.1| outer membrane efflux protein [Legionella pneumophila 2300/99 Alcoy] Length = 468 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 213/468 (45%), Gaps = 54/468 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKL 64 L V L GC P Y +PH+ ++ ++S+ + KN+ NID+ + WW F D +LN+L Sbjct: 9 LLSVFLVGCYSEP-YHRPHVEVI-NKWSVKD-KNVKNIDSKNIPYIAWWRDFKDPTLNQL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPN 111 ++ L N ++ + I AA+ + +R P + + + FIPN Sbjct: 66 IERGLISNTSLGMSRGSIEAAEGELKKIRYQWVPTLDLMTGYSRNPATGFPGVLIVFIPN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + I++ Q R + + L A+ D KL +IS++ SY Sbjct: 126 ------------YTINIINQIREQKRAKYTLAQVKAEDDALKLTIISQIAASYFTYLAEI 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + ++++ + G +S++ +L +++ I+ ++ E++ ++ + Sbjct: 174 ERKEFLQTLANDLTQLAKVANKVYQGGLSSEIEQEELYSQVNLIQGELEVTERNIVISRN 233 Query: 232 NISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LL E +Q ++ P +P ++ NRPD++ E +L S Sbjct: 234 ALRYLLNQNPGEIKTVKKLLQLKNRKLIPG-------SLPLTVLENRPDMQVAENRLRAS 286 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIR 345 IG+A+S+L P++ L+ G +A D+ + F +L PI D + + Sbjct: 287 HEGIGVAESNLLPTIQLDYIGGLA-AGDSRYALPKKTVKFNDQLLKAPIIDM-PVLGAVA 344 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 +A+ + Y + +T+ A+++ NAL+ E++++ KL+ K K+ +L+ Sbjct: 345 KAKGVNKVSYYNYIDTLQKALRDTTNALS---ENERLTNKLKQTASAQKHLAKAYNLNDR 401 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S ++ L+ + + K+ + L+ K Q S V LY + GY Sbjct: 402 LYQTGIQSYIETLNSKISLDKINISLNQDKLQELLSIVRLYQELAGGY 449 >gi|26987998|ref|NP_743423.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida KT2440] gi|24982715|gb|AAN66887.1|AE016317_4 fusaric acid resistance protein, putative [Pseudomonas putida KT2440] Length = 509 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 92/475 (19%), Positives = 205/475 (43%), Gaps = 30/475 (6%) Query: 1 MNILRAIFSLFIVL-LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 + L+A + + L L+GC + P+ L T +I + + +WW + Sbjct: 6 IRTLKAFSACALALTLSGCIGTWGIAPQSKTLQANTLTTDAAIREAATDAHWPDQQWWHA 65 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLK 113 + D L++ V +A+ + ++ A R+ AK ++ L + A++ P + Sbjct: 66 YGDPQLDRWVTLAVAGSPSLAMAAARVREAKAMAGVVESAEKLQANGQATLKRHNWPEDQ 125 Query: 114 TNSTGQLDS------------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 G L + +DL+ + R+ E ++ + A+ A+L + + + Sbjct: 126 FYGPGALSGANTWDNNAAIGFSYALDLWDRERNASEQAVDQAHMSVAEARQAQLELQNNV 185 Query: 161 IPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +YI + HF +R I L+ ++ + L+ + G + + + EA + + Sbjct: 186 VRAYIQLSLHFAQR-DIVKAELEQQEQILALAKRRLDAGIGTHFEVSQAEAPLPETHRQL 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 +L++ + + ++ L G E +Q+ L +P N+ PA+L+ RPD+ Sbjct: 245 DSLDEEIALTRNQLAALAGKGPGEGAQ-LQRPVLALAAPLKLPSNL--PAELVGQRPDVV 301 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPI 334 ++A I +A + +P++ L GS+ P G +++ GP + LPI Sbjct: 302 ASRWQVAAQARGIDVAHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPI 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+++S + A + + +TV+ A+K + + L K+ +V + Sbjct: 362 FDGGRLRSELGVASAGYDVAVARYNQTVVGALKNISDQLIRRESMKEQSHFAAESVAAAQ 421 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K+ ++M+ +++G L++L+ + + + + ++ +L A+G G Sbjct: 422 KTYDIAMVAFQRGLTDYLNVLNAQTLLFRQQQVQQQVQAARLIAHAELVTALGGG 476 >gi|295095293|emb|CBK84383.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 454 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 99/462 (21%), Positives = 208/462 (45%), Gaps = 25/462 (5%) Query: 3 ILRAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + R +L AGC ++ P Y +P P+ T + + N + + ND L Sbjct: 1 MFRVTVLTLALLSAGCVSLDPTYQRPDAPVPAT---LPGAHGEANAVVSQRQQVMNDARL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 +V +AL N + +A I+AA+ R+ LFP+ A +SH +T ++G Sbjct: 58 KSVVTMALNSNRDVQKAIADIDAARAQYGETRSSLFPTVDAELSH---TRSRTLASGVAT 114 Query: 122 SD--------WKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 SD +++DLFG+ + + + L S + + +L ++S+L +++ Sbjct: 115 SDEANGAVSSFELDLFGRNQSLSRAARETWLASEFTAQNT-RLTMVSELTTAWVTLAADN 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++A L+ ++++ + G + + + A + + + + + + + Sbjct: 174 SNLALAKSTLESAANSLKIVKRQQEVGVAAATDVSEAMAVYQQARASVASYQTLVMQDKN 233 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G E L + + N I G+ + + RPDI+ E L + A Sbjct: 234 ALNLLAGDTVPENL--LPGTLESLSDNAITLIPAGVSSSALLRRPDIQEAEHNLLSANAN 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRA 347 IG A+++ +P++SL S + D S +H WSF P + LP+F G + +R A Sbjct: 292 IGAARANFFPTISLTASAGVGSD-SLSSLFSHGMKVWSFAPSITLPLFSGGNNMAQLRYA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + T+++T+ +A K+V +AL + + + V +K++ ++ +Y+ G Sbjct: 351 EAEKKGLIATYEKTIQSAFKDVADALARRETLSEQLDAQREYVAAEQKTLDVATRSYKAG 410 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L +L +R+ + L ++ ++ + L+ ++G G Sbjct: 411 AGDYLTVLTAQRSLWSAQESLIALQQTDLENRITLWQSLGGG 452 >gi|218131779|ref|ZP_03460583.1| hypothetical protein BACEGG_03400 [Bacteroides eggerthii DSM 20697] gi|217986082|gb|EEC52421.1| hypothetical protein BACEGG_03400 [Bacteroides eggerthii DSM 20697] Length = 460 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 107/469 (22%), Positives = 196/469 (41%), Gaps = 35/469 (7%) Query: 4 LRAIFSLFIV--LLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWES 55 ++ I +L LL+ C + Y +P L + G++ + N L W E Sbjct: 1 MKKIITLMCATALLSSCHIYKSYDRPEDITVEGLYRDTVAGGDTLAADTANFGNLPWKEV 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F D L L++ AL N + A + A+ ++S R P S ++S Sbjct: 61 FTDARLQTLIEQALANNADLRSAALTVKQAQAALMSARLAYAPMLALSPQGTVSSWDKGK 120 Query: 112 LKTNSTGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + + W+IDLFGQ +R + SL Y Q + VI+ + Y Sbjct: 121 ATQTYSLPVTASWQIDLFGQLLNPKRKAQVSLKQTQF-YEQA--VQTQVIANVANMYYTL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ I+ D+ K+N+E + ++ + + + +P + +S R Sbjct: 178 LMLDRQLQISEATCDILKRNLETVEAMKEAAMANSAAVEQSRTAYAQVMASLPDIRQSIR 237 Query: 228 MNVHNISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + +L PA ++ Q L + GIP L+ NRPD++ E LA Sbjct: 238 ETENALCLMLNQPAQSIARGTLESQ------ELPAEFSTGIPLQLLSNRPDVKAAEMSLA 291 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKS 342 S A++ YP ++L+GS T+ PG + G L P+F +G + Sbjct: 292 ASYYDTNSARAAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGANIA 350 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLS 400 +++A++ ++ I +Q T+L A EV NAL + DK + ++Q V +K+ + Sbjct: 351 RLKQAKAQEEQAKIQFQTTLLKAGNEVSNALYQYQMTSDKAVSREIQ--VNSARKAAEDT 408 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L E++ ++ +S + LY A+G G Sbjct: 409 KELFNLGTSTYLEVLSAEQSYLSAQLSEVADTFDRMQSVISLYQALGGG 457 >gi|299142101|ref|ZP_07035235.1| outer membrane efflux family protein [Prevotella oris C735] gi|298576563|gb|EFI48435.1| outer membrane efflux family protein [Prevotella oris C735] Length = 473 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 208/461 (45%), Gaps = 68/461 (14%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LPTQ+ N L T W+ F D L L+ AL N + ++I AK ++ Sbjct: 35 LPTQY---NGDTLTAKTTPTSWKMFFTDPQLKTLIDSALANNQDLKITLQQIAVAKSGMI 91 Query: 91 SVRADLFPS-----------------------SYASISHRFIPNLKTNSTGQLDSDWKID 127 + + + PS S + IP+ N DW++D Sbjct: 92 AAKGAMLPSLSVGAEVGVSKAGRYTSEGAGNASTEMTPGKLIPDPLMNYHPGFAFDWELD 151 Query: 128 LFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG+ + +E LA L+ A + ++IS++ +Y ++++ + +D Sbjct: 152 LFGKLKSSKKAAVERYLATLEGQNA----VRASLISQVASNYYTLLALDNKLALIRKYID 207 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L ++ +++ ++ + ++L++ K +AE+ S L++ + ++ LLG YP Sbjct: 208 LQRQAEKIAEIQKKADSDTELAVEKFKAELAKARSQEFALKQEITECENALNLLLGRYPT 267 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +Q+ + + IG+P++L+ +RPDIR E +LA + + A+ P Sbjct: 268 P-----IQRDAKQLLNEDVKMVVIGLPSNLLSHRPDIRQAEHELAAAHWDVETARKAFLP 322 Query: 302 SLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S++++ ++ L N P Y T +S L P+ ++ I++N ++A+++ + Sbjct: 323 SVNISATLGLEAFN--PTYLTRMPKSLAYSVVGGLTAPLINRKAIEANFQQADAAQLQAL 380 Query: 356 ITWQETVLNAIKEVENALT---------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +T+L A EV L+ ++ E++ V L+H+VE+ ++ Y Sbjct: 381 YEYDKTLLTAYSEVCTLLSKHKNLAAYYALKEEE--VKTLEHSVEVSRQL-------YMN 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 GR + LD+L ER +++L ++Q VDLY ++G Sbjct: 432 GRATYLDVLGAERDALDAQMELLETRQQQLSCVVDLYRSLG 472 >gi|54292982|ref|YP_125397.1| hypothetical protein lpl0018 [Legionella pneumophila str. Lens] gi|53752814|emb|CAH14248.1| hypothetical protein lpl0018 [Legionella pneumophila str. Lens] Length = 461 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 54/468 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKL 64 L V L GC P Y +PH+ ++ ++S+ + KN+ NID+ + WW F D +LN+L Sbjct: 9 LLSVFLVGCYSEP-YHRPHVEVI-NKWSVKD-KNVKNIDSKNIPYIAWWRDFKDPTLNQL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPN 111 ++ L N ++ + I AA+ + +R P + + + FIPN Sbjct: 66 IERGLISNTSLGMSRGSIEAAEGELKKIRYQWVPTLDLMTGYSRNPATGFPGVLIVFIPN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + I++ Q R + + L A+ D KL +IS++ SY Sbjct: 126 ------------YTINIINQIREQKRAKYTLAQVKAEDDALKLTIISQITASYFTYLAEI 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + +++ + G +S++ +L +++ I+ ++ E++ ++ + Sbjct: 174 ERKEFLQTLANDLTQLAKVASKVYQGGLSSEIEQEELYSQVNLIQGELEVTERNIVISRN 233 Query: 232 NISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LL E +Q ++ P +P ++ NRPD++ E +L S Sbjct: 234 ALRYLLNQNPGEIKTVKKLLQLKNRKLIPG-------SLPLTVLENRPDMQVAENRLRAS 286 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIR 345 IG+A+S+L P++ L+ G +A D+ + F +L PI D + + Sbjct: 287 HEGIGVAESNLLPTIQLDYIGGLA-AGDSRYALPKKTVKFNDQLLKAPIIDM-PVLGAVA 344 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 +A+ + Y + +T+ A+++ NAL+ E++++ KL+ K K+ +L+ Sbjct: 345 KAKGVNKVSYYNYIDTLQKALRDTTNALS---ENERLTNKLKQTASAQKHLAKAYNLNDR 401 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S ++ L+ + + K+ + L+ K Q S V LY + GY Sbjct: 402 LYQTGIQSYIETLNSKISLDKINISLNQDKLQELLSIVRLYQELAGGY 449 >gi|295690369|ref|YP_003594062.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295432272|gb|ADG11444.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 476 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 109/479 (22%), Positives = 194/479 (40%), Gaps = 69/479 (14%) Query: 10 LFIVLLAG-CTV----GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + I LAG C V P+ P + P + NL + WW + D L L Sbjct: 9 VLIAPLAGACAVSAPRAPDLAVPAVYAAPRPGADPPKSNLEH-----WWRLYQDPQLEML 63 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLF-PSS--YASISHRFIPNLKTNSTGQLD 121 V AL+ A R+ A+ + ++ PS AS +H ++G D Sbjct: 64 VAQALEGGFDARLARARLAEAQATRGAAHYQIYWPSGGLEASANH---------ASGDDD 114 Query: 122 SD-------------WKIDLFGQR---RHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 S+ W++DLFG+R R + +L SA + + +++++ + Sbjct: 115 SERDIDRYAASFSPAWELDLFGRRAASRRVAEG--DLHSAEFTAEATRWVLVAQVADNLF 172 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 AR R++ A + L + + + K G + A +++I S+I LE Sbjct: 173 AARGLAARLTEARETLRIQRALEASAQAKVEHGLVPASDAAQTRANVETIRSEIQDLEAQ 232 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI--NIG--------IPADLIRNR 275 + L G P +PI IG +P DL+ R Sbjct: 233 LDAARRVLLALCG--------------RGRAPLDEMPILPRIGAPPAPPATVPGDLLSRR 278 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLP 333 PDIR +LA + + +A P+L+L+ S+ ++ G +T WS G +P Sbjct: 279 PDIREAHWRLASAAGRQQLAALAFLPTLTLSPSLGISK---VTGSDTASLWSLGAGAKVP 335 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + D +++ + + +++Q + ++ +V A E E AL ++ D + VT L+ A Sbjct: 336 LLDIPRLRKTLDARRAVSEQQVLAYERSVQTAYVEAETALAYLDSDTRRVTMLRAAERDA 395 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 YR+G +L D L E A + + L+ A+ + V ++ A+G G++P Sbjct: 396 AIGYEAKHEGYRRGFNALQDTLVAEGAWRQARIALAGAEVTALQRSVQVFKALGGGWSP 454 >gi|167850816|ref|ZP_02476324.1| outer membrane lipoprotein [Burkholderia pseudomallei B7210] Length = 404 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 77/327 (23%), Positives = 156/327 (47%), Gaps = 9/327 (2%) Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 + +DL+G +RRH+E A D+ + A+L + + ++ + I + + I++ +++ Sbjct: 71 YALDLWGGERRHVEGLAAQADAQRHALAAARLTLAANVVNTMIARAAYADEIALTRELIA 130 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L + I L+ + + G ++ +++ L+A S+++ +P LE+ ++TL G YPA Sbjct: 131 LTDEQIRLTRAQVSAGTSAYTAVLALQAARASLDASLPALEQKTGEADDLLATLAGRYPA 190 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 ++ Q + L + +P++L+R RPDI E L + A IG+A + L+P Sbjct: 191 ----EHVPPQVSLAAIALPARLPRTVPSELVRRRPDILQAEAVLHAASANIGVASAALFP 246 Query: 302 SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S++L+ S + F WS G + P+F G + + A + E + Sbjct: 247 SVTLSASGGFDATRASALFGPAGRAWSVGASITAPLFHGGALWYQRKAAVDAFDESNAAY 306 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++TVL+A +V + L +++ D + A+ + + L+ + Y G L +L + Sbjct: 307 RQTVLSAFAQVADTLRALDHDATALDAQARAMSAARDARRLATVQYEAGTAGYLQVLLAD 366 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + A Q + V LY A Sbjct: 367 QQYRQARLAWVQASAQRLQDTVALYAA 393 >gi|212690817|ref|ZP_03298945.1| hypothetical protein BACDOR_00304 [Bacteroides dorei DSM 17855] gi|212666694|gb|EEB27266.1| hypothetical protein BACDOR_00304 [Bacteroides dorei DSM 17855] Length = 457 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 193/424 (45%), Gaps = 35/424 (8%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 NI L W E F D L +L++ L+ N + A R+ A+ +LS + PS +A Sbjct: 47 NIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQWRVKEAEAAMLSAKLAYLPS-FALSP 105 Query: 106 HRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 + Q + + W+ID+FG+ R+ + + A L+ + + +I+ Sbjct: 106 QGTASSFDKGKAAQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRTQLIAG 165 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y +++I+ + +K+ ++ + G ++ ++ ++EA +I + + Sbjct: 166 IANTYYTLLMLDNQLAISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSV 225 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS---NNFQPNLYIPINIGIPADLIRNRP 276 L++ +++S LL P H +++ +++ + P+ GIP ++ NRP Sbjct: 226 LDLKEQINQVENSLSLLLAEPP----HAIKRTGTWDSSYMLKEHFPV--GIPVQMLANRP 279 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYL 332 D+R E+ L + A+S YPS+ L+GS T+ PG + L Sbjct: 280 DVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGSMIVNPGKFIATAVA-SLTQ 338 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDK-----KIVTK 385 P+F+KG + ++ A++ +E +++Q+ +LNA EV AL DK K + Sbjct: 339 PLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSAYYDKQINS 398 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L A+E S SL M + G + L++L ++ E+ + + ++LY A Sbjct: 399 LNKALE----STSLLM---QHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQA 451 Query: 446 IGSG 449 +G G Sbjct: 452 LGGG 455 >gi|149279868|ref|ZP_01885995.1| RND efflux system, outer membrane lipoprotein, NodT [Pedobacter sp. BAL39] gi|149229458|gb|EDM34850.1| RND efflux system, outer membrane lipoprotein, NodT [Pedobacter sp. BAL39] Length = 477 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 106/467 (22%), Positives = 215/467 (46%), Gaps = 46/467 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 AGC V + + P + T ++ + + ++ L E F D L L+ AL +N + Sbjct: 25 AGCKVSKDLSIPKDSIPETFRNVNTTGDTSSVARLSVKEFFKDPHLQSLLDTALLKNNDL 84 Query: 76 LQATERINAAKENILSVRADLFPS---SYASISHRFIPN-LKTNSTGQ------------ 119 A + + +A+ N R P + S+R N L ST Q Sbjct: 85 QVALKNMESAELNYKQSRLGNLPQLNLQVTANSNRPSDNSLNGLSTSQFLNTSHVEDYNA 144 Query: 120 -LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARHFKER 173 L W+ D++ + + +++LA Y Q AK + ++L+ S Y + Sbjct: 145 NLGLSWEADIWSKIKSRKQAALA----GYLQTTEAKKAIQTRLVASIASGYYRLMMLDAQ 200 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 ++IA + L L + + ++++ G + L++ + EA+ IP+LE+ + + I Sbjct: 201 LAIAKRNLSLNDSTLNIIRMQYSAGQVTSLAIQQAEAQQMVAAQLIPSLEQQIAVQENGI 260 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G F + + S+ + L + G+P++++ RPD+R E +L + A++G Sbjct: 261 RILTG----NFPGSISRSSSLAEVPLDGTLTAGVPSEMVARRPDVRSAELQLNIANAEVG 316 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK---------LYLPIFDKGKIKSNI 344 ++K++LYPSL++ + L NSF N W P L PIF + +++N Sbjct: 317 VSKANLYPSLTITAAGGL---NSFKASN--WFTMPASLFGTVAGGLTQPIFQRRMLRTNY 371 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMIN 403 R+ ++ I ++++VL A EV + L I + + + + + L++ + ++ Sbjct: 372 ERSLIEREKTVIQFRQSVLVAAGEVSDELVRIEKLNLQFDIASRRTLTLNQALRNAGLL- 430 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ G + L+++ + + + E+DL+ + + + V LY A+G G+ Sbjct: 431 FKNGMANYLEVITAQSNSLQSELDLATIRTERLTAAVSLYRALGGGF 477 >gi|323525730|ref|YP_004227883.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323382732|gb|ADX54823.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 507 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 182/420 (43%), Gaps = 20/420 (4%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F+D L KL+ AL+ N +I QA R+ A I S R+ L+P S S Sbjct: 62 SLDWANQFDDPQLPKLIAEALEGNPSIAQAQARLAKASSYIESSRSALYPKVTGSYSWTR 121 Query: 108 ------------FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + + + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELLSGNALYPPPYGGSWYSENNALASASWDLDLWGKNRQRLGQAVSQEKAAEADMQQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + ++ +++ + G + + I + Sbjct: 182 TLAASVASTYNQLAQLYALRDIAAREIQNRQEIGRITNGRVAAGLDTNVERQTANGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S++ LE + + + LLG L Q + + +P N+ PADL+ Sbjct: 242 SQSNLTDLEGQITVVRYQLGALLGKGPDRGLQIAQP-ALGVGGTVALPDNL--PADLVAR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R DI ++ ++ + AK++ +P ++L G A + FGP ++ Sbjct: 299 RADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLRAGSRQMQFGPAIH 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G ++S ++ + + +T++NA+ +V + SI + Q A++ Sbjct: 359 LPIFDAGALRSQLKGRYADFDLDVANYNQTLINALSDVATQVASIRSIDQQSGDAQRALD 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ L++I Y+ G L +L ++ E ++ K + + L A+G G++ Sbjct: 419 ASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAAEQTVTTLKMRRRDLQIGLIKALGGGFD 478 >gi|115351714|ref|YP_773553.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115281702|gb|ABI87219.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 536 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/364 (22%), Positives = 164/364 (45%), Gaps = 36/364 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---SYASISHR 107 WW + +LN LV L+ + T+ A+ ++AA+E + + + + PS + R Sbjct: 74 WWTQYRSDALNALVDEGLRNSPTLGAASHSLDAAREQLRGQIGSSMLPSIDAGAQATRQR 133 Query: 108 F----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNV 156 IP L + GQL + + IDLFG R +LA +D + Q++ A+ + Sbjct: 134 ALGVPIPALGAPTLLYDTFVGQLQASYTIDLFGVSRFANRALAKRVDVSAFQLESARRAL 193 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I +I +++ L + + G+ S+ + + Sbjct: 194 AANIVTTSITVAVLNAQIETTERLVALANDQAHDAERRHALGSASRSDALSARQSADTFA 253 Query: 217 SDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 + +P L + H ++ L+G PA L +L++P + + +P+ Sbjct: 254 ASLPALRQQRDSARHALAVLVGRTPDRPPADLALA-----------DLHLPEQVPVVVPS 302 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 DL+++RPDI+ + L + A++G+A + ++P LSL+ G + G + W+ Sbjct: 303 DLLQSRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMGKGGFSWPTMLSGAGSIWNV 362 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G L PIF G + + R A+++ + +++ VL A + V ++L ++ D + + Sbjct: 363 GASLSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEALDAS 422 Query: 387 QHAV 390 HA Sbjct: 423 SHAA 426 >gi|241765831|ref|ZP_04763769.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241364253|gb|EER59420.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 211 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 15/167 (8%) Query: 265 IGIPADL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---- 316 + +PADL + NRPD+R E L + A IG A++ +PS++L S A T N+ Sbjct: 5 LAVPADLPSTVLLNRPDVRAAEYTLRGAYASIGAARAAFFPSITLTAS-AGTASNALSGL 63 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL--- 373 F G N WSF P++ LPIFD G+ ++N+R AE++ + + V A +EV +AL Sbjct: 64 FDGGNGTWSFAPQIRLPIFDAGRNRANLRIAETARDTAVAQYDKAVQTAFREVADALADR 123 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ E + LQ A + K++ LS YR G S L +LD +RA Sbjct: 124 ATLAERLQAQQSLQAATQ---KALQLSEARYRLGADSYLPVLDAQRA 167 >gi|317474606|ref|ZP_07933880.1| outer membrane efflux protein [Bacteroides eggerthii 1_2_48FAA] gi|316909287|gb|EFV30967.1| outer membrane efflux protein [Bacteroides eggerthii 1_2_48FAA] Length = 460 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 107/469 (22%), Positives = 196/469 (41%), Gaps = 35/469 (7%) Query: 4 LRAIFSLFIV--LLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWES 55 ++ I +L LL+ C + Y +P L + G++ + N L W E Sbjct: 1 MKKIITLICATALLSSCHIYKSYDRPEDITVEGLYRDTVAGGDTLAADTANFGNLPWKEV 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPN 111 F D L L++ AL N + A + A+ ++S R P S ++S Sbjct: 61 FTDARLQTLIEQALANNADLRSAALTVKQAQAALMSARLAYAPMLALSPQGTVSSWDKGK 120 Query: 112 LKTNSTGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + + W+IDLFGQ +R + SL Y Q + VI+ + Y Sbjct: 121 ATQTYSLPVTASWQIDLFGQLLNPKRKAQVSLKQTQF-YEQA--VQTQVIANVANMYYTL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ++ I+ D+ K+N+E + ++ + + + +P + +S R Sbjct: 178 LMLDRQLQISEATCDILKRNLETVEAMKEAAMANSAAVEQSRTAYAQVMASLPDIRQSIR 237 Query: 228 MNVHNISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + +L PA ++ Q L + GIP L+ NRPD++ E LA Sbjct: 238 ETENALCLMLNQPAQSIARGTLESQ------ELPAEFSTGIPLQLLSNRPDVKAAEMSLA 291 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKS 342 S A++ YP ++L+GS T+ PG + G L P+F +G + Sbjct: 292 ASYYDTNSARAAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGANIA 350 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLS 400 +++A++ ++ I +Q T+L A EV NAL + DK + ++Q V +K+ + Sbjct: 351 RLKQAKAQEEQAKIQFQTTLLKAGNEVSNALYQYQMTSDKAVSREIQ--VNSARKAAEDT 408 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L E++ ++ +S + LY A+G G Sbjct: 409 KELFNLGTSTYLEVLSAEQSYLSAQLSEVADTFDRMQSVISLYQALGGG 457 >gi|157370717|ref|YP_001478706.1| RND efflux system outer membrane lipoprotein [Serratia proteamaculans 568] gi|157322481|gb|ABV41578.1| RND efflux system, outer membrane lipoprotein, NodT family [Serratia proteamaculans 568] Length = 484 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 110/483 (22%), Positives = 207/483 (42%), Gaps = 59/483 (12%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIG------NSKNLINIDTLKWWESFN 57 R I F +LLAGC ++ P Y +P P+ PT G + K ++ + W + Sbjct: 4 RLITLTFPLLLAGCISLDPNYQRPAAPV-PTTMPQGAAYTAPSGKLSLSYPDIPWRDYVV 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D L ++V++ L + + +A I +A+ R+DLFP+ A + L N Sbjct: 63 DAKLRQVVEMGLSSSRDLREAIANIESARALYGEQRSDLFPTINAGVDGSRGRALTGNGN 122 Query: 118 GQL----------DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSY 164 S +++DLFG+ R + S ++ A+ + AK L +I+ ++ + Sbjct: 123 ATAISQSYEATAGTSAFELDLFGKNRSLSRS--TFETYLAESEAAKSTRLTLIADIVTDW 180 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ + ++ A ++ K ++ ++ G S + + + + SD+ + Sbjct: 181 VNVAAERSNLNAARGTMESAKLSLAVTRKNQQNGILSMVDVATADTVYQQARSDVASYTT 240 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--------IPADL----I 272 S + + ++G E L +P +I IPA+L + Sbjct: 241 SAAQAKNALDLVVGQSVPENL---------------LPTDIAALSGIMKDIPANLSSQVL 285 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHDNS-FPGYNTHWSFGPK 329 NRPD+ E L + A IG A++ +PS++L +G I +S F WSF P Sbjct: 286 LNRPDVLEAEHNLKAANANIGSARAAFFPSINLTASGGIGSGELSSLFSKGAGVWSFSPS 345 Query: 330 LYLPIFDKG--KIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKL 386 + LPIF G + N RA+ ++ Y+ T+++ V A +E +AL ++ + Sbjct: 346 ISLPIFTGGYNTAQLNYTRAQ---KDLYVATYEKAVQTAFQETADALARKGTIQEQLAAQ 402 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V ++ L+ + YR G + L +LD +R L ++ ++ + LY + Sbjct: 403 TGYVAASQEYYRLAELRYRHGVDTYLTMLDAQRTLYSARQSLITTQQTEYQNLITLYKVL 462 Query: 447 GSG 449 G G Sbjct: 463 GGG 465 >gi|172060713|ref|YP_001808365.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171993230|gb|ACB64149.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 532 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 80/364 (21%), Positives = 165/364 (45%), Gaps = 36/364 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---SYASISHR 107 WW+ + +LN LV L+ + T+ A+ ++AA+E + + + + PS + R Sbjct: 74 WWKEYRSDALNALVDEGLRNSPTLGAASHSLDAAREQLRGQIGSSMLPSIDAGAQATRQR 133 Query: 108 F----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNV 156 IP L + GQL + + +DLFG R +LA +D + Q++ A+ + Sbjct: 134 ALGVPIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESARRAL 193 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I +I +++ L + + G+ S+ + + Sbjct: 194 AANIVTASITVAVLNAQIETTERLVALANDQAHDAERRHALGSASRSDALTARQSADTFA 253 Query: 217 SDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPA 269 + +P L + H ++ L+G PA L +L++P + + +P+ Sbjct: 254 ASLPALRQQRDSARHALAVLVGRTPDRPPADLALA-----------DLHLPQQVPVVVPS 302 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 DL+++RPDI+ + L + A++G+A + ++P LSL+ G + G + W+ Sbjct: 303 DLLQSRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMGKGGFSWPTMLSGAGSIWNV 362 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G L PIF G + + R A+++ + +++ VL A + V ++L ++ D + + Sbjct: 363 GASLSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEALDAS 422 Query: 387 QHAV 390 HA Sbjct: 423 SHAA 426 >gi|332829119|gb|EGK01783.1| hypothetical protein HMPREF9455_01931 [Dysgonomonas gadei ATCC BAA-286] Length = 470 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/443 (23%), Positives = 197/443 (44%), Gaps = 44/443 (9%) Query: 36 FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD 95 F N + I + W E F+D +L L+ L N + A RI A+ + ++ Sbjct: 41 FRGENPTDTTTIANIPWREYFSDPALQALIDEGLTNNYDLRLAYNRIQQAEAGLYIAKSA 100 Query: 96 LFPSSY--ASISH--RFIPNLKTNSTGQLDSD---------WKIDLFGQ-RRHIESSLAN 141 FP+ A ++H + I N K G D W+ D++G+ ++ AN Sbjct: 101 YFPTVALGAQVTHTQKSISNGKERVLGYNGGDQWALGFVVQWEADIWGKLNSKTKAQYAN 160 Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 L S +A ++ + ++++ + +Y E++ I + ++L K++ G + Sbjct: 161 LVSTHAYRNLIQTSLVANIATTYYSLLALDEQLKITLETIELLKESTATMQAMMQAGLLN 220 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLY 260 + + + EA + S + +P L+ +++S LLG P + QS Sbjct: 221 RAGVKQSEALLYSTQVSVPDLQMQINQLENSLSLLLGRKPGPITRTAIDNQS-------- 272 Query: 261 IP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-----TH 313 +P + +GIPA ++ RPD+ E + +A+ LYPSL+L S ++ T Sbjct: 273 VPSELQVGIPAQMLAKRPDVLQAEMGFRYAFEMKNVAQRSLYPSLTLGSSSSVGFASNTL 332 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 F N + L PIF +++ + A++ +E +T+++TVL A +EV N + Sbjct: 333 SQFFKPTNILANIVGGLTQPIFAGNQLRGQYKIAKAQQEEALLTFEQTVLTASQEVSNIM 392 Query: 374 ----TSI--NEDK-KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 TS+ NED+ K V L AV ++ + NY ++L E++ + ++ Sbjct: 393 FTYETSLRKNEDRAKQVDALSLAVGDTQQLLKAGEANYT-------EVLQAEQSLLQAQL 445 Query: 427 DLSIAKRQLAKSYVDLYIAIGSG 449 K + ++ V+LY A+G G Sbjct: 446 GQVSDKLEQLQASVNLYRALGGG 468 >gi|149277407|ref|ZP_01883548.1| outer membrane protein [Pedobacter sp. BAL39] gi|149231640|gb|EDM37018.1| outer membrane protein [Pedobacter sp. BAL39] Length = 477 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 106/480 (22%), Positives = 213/480 (44%), Gaps = 41/480 (8%) Query: 3 ILRAIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 I + L I L A GC + + +P + NS + N +L+W F D++L Sbjct: 6 IYTCVALLGICLAATGCKIPAITQRQENNAVPASYH--NSSDTTNTASLQWRSFFRDSNL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 L+ AL +N ++ + I AK +I + + P+ A I + S G D Sbjct: 64 VSLIDTALHRNQELMITLQEIEIAKNDIRLKQGQILPTVGAKIGLGVEKVGRYTSQGAGD 123 Query: 122 -----------------------SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 ++W++D++ + + +++++ S + N+I Sbjct: 124 ASTEIAPGKETPDPLMDYGAMAYANWEVDIWKKLHNAKKAAVSRYLSTVEGKNFVLTNMI 183 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ SY + ++ I Q + L K +E+ ++ ++L++ K AE+ + +S Sbjct: 184 AEVANSYYELLALDSQMEIVKQNIALQKNALEVVKIQKEASRVTELAVQKFRAEVLNSQS 243 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +++ + I+ LLG YP + + Q + P + + GIP+ L+ NRP Sbjct: 244 LEFNIQQQITETENKINALLGRYP--QAIPRTQHHFFDIMPAM---VQTGIPSQLLANRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKL 330 DI+ E +L + + +A+++ YPS ++ N P Y + +S L Sbjct: 299 DIKKAELELVAAKLDVKVARAEFYPSFGISAGFGFQAFN--PSYLVKFPESMLYSLVGDL 356 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+ ++ IK+ A + + +++T+LNA EV N+L+SI+ K V Sbjct: 357 AGPLINRNGIKAEFLSANARQIQAMYNYEKTILNAYMEVSNSLSSISNLDKSYELKSKEV 416 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E KS+ +S +R R L++L +R +++L K++ + +++Y A+G G+ Sbjct: 417 EALTKSIDISNDLFRSSRADYLEVLMTQRDALASKLELVETKKEQLNAAINVYKALGGGW 476 >gi|330963557|gb|EGH63817.1| outer membrane protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 470 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 106/476 (22%), Positives = 207/476 (43%), Gaps = 49/476 (10%) Query: 11 FIVLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + LLAGC + P+Y +P P+ LP + ++ + D ++W F D L +L Sbjct: 10 LMALLAGCVNLAPDYQRPEAPVSEQWLPAAAANPSASASVPTD-IEWQNFFTDNRLVRLQ 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS---------------------SYASI 104 +AL N + A+ + A+ RA P+ +SI Sbjct: 69 TVALINNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSATHTRTSASASTSTTGRSSI 128 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISK 159 +H + L +S +++D+FG Q +E LA ++ + ++++I++ Sbjct: 129 NHEYSAQLGLSS-------YELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAE 177 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + ++ + + +A L +++ +L+ G +S L + + + ++S D+ Sbjct: 178 VATGWLTLAADNQLLKLAEDTLASQRQSYDLTQRSHALGGSSGLEVAQAQTTVESARGDV 237 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + + + L+G + L + Q + + +P+ L++ RPD+ Sbjct: 238 AQYQSQVLQDRNALRLLVGSDIPDALLPAADAQSVAQ---LVQVPDELPSSLLQRRPDVL 294 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFD 336 E L + IG A++ +PS++L + + F + WSF P + +PIFD Sbjct: 295 SAEHSLKSANIDIGAARAAFFPSITLTANAGSASSSLSGLFKAGSGAWSFAPSISVPIFD 354 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G ++ + A+ Q Q T+Q+T+ A KEV +AL + + V Q + +KS Sbjct: 355 GGANRATLDSAKIENQIQIQTYQQTLQTAFKEVADALAVRSTLDERVAAQQAYTDASRKS 414 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ YR G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 415 YELADALYRGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 470 >gi|207723121|ref|YP_002253520.1| outer membrane lipoprotein [Ralstonia solanacearum MolK2] gi|206588314|emb|CAQ35277.1| outer membrane lipoprotein [Ralstonia solanacearum MolK2] Length = 462 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/455 (23%), Positives = 198/455 (43%), Gaps = 33/455 (7%) Query: 17 GCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GCT+ P Y P M PT + + D WW + D +++KLV+ AL + Sbjct: 14 GCTLQPGYVAPDMSAPGSWPTASAAKTPQGQAAAD--DWWRALGDPAVDKLVEAALADSP 71 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS----------- 122 T+ QA RI+ A+ + A P+ AS S N+ GQ + Sbjct: 72 TLSQAVARIDEARATVGVNAAAAAPNVTASASATRAKG--QNTVGQTTTLISNAAAIGPS 129 Query: 123 -DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 W++DLFG+ R ++++ LD+ A A+L + + + + R ++ Sbjct: 130 LSWEVDLFGRIRNSVDAAKNRLDARTADAAAARLALAADVADGVLSLRACDRSRAVLADD 189 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + +K + L+ L+ G + + + I ++ +++ + ++ +H + L G Sbjct: 190 IASREKTLALTRLRAASGFAPPSDVARAISGIATVRTNLASQQEQCARQIHALVALSGKN 249 Query: 241 ATEFLHYM--QKQSNNF--QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 A+ + + +F QP P +PA ++ + P + +++ A + A IG+A+ Sbjct: 250 ASTVRQQVLGAGTTPDFMPQPPASAPE---LPATVLAHHPSVISSDREAAAAWADIGVAR 306 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 +D P L L +I G T WS GP L +FD G +N+ A++ ++ Sbjct: 307 ADRLPRLDL-AAILTGQWIRAAGSTLNFTTWSVGPSLTGTLFDGGAGAANVSAAQARYRQ 365 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + + T+ +++VENAL + + + A + ++ S + G SL + Sbjct: 366 SVASLRGTLRTTVEDVENALAAQTSAQDRTASAREATDAAHTTLVASEGQWSAGAVSLFE 425 Query: 414 ILDIERATAKVEVDLSI-AKRQLAKSYVDLYIAIG 447 + D R A + D I A+R A+++V L A G Sbjct: 426 LEDSRRQYAAAQ-DAEISARRDRAQAWVALVKATG 459 >gi|323144612|ref|ZP_08079200.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Succinatimonas hippei YIT 12066] gi|322415621|gb|EFY06367.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Succinatimonas hippei YIT 12066] Length = 466 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 106/452 (23%), Positives = 208/452 (46%), Gaps = 25/452 (5%) Query: 11 FIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKLVKIA 68 I+ L+GC+ + +Y +P + ++ S N+ + N + K+W F+D L +V+ A Sbjct: 12 LIIGLSGCSLMQTDYERPQLAIVD---SYKNAAEFLGNRVSDKFWTEFSDPKLTAVVENA 68 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASI-SHRFIP--NLKTNSTG-QLDS 122 L NL + A + A+ + + +L P S+ +I + R + N +T S+G L Sbjct: 69 LNANLDLQSAYLNVRKARYALDEINTNLLPDFSAGGNIGAERRLEHHNSETKSSGTNLTL 128 Query: 123 DWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++DLFG R E SS NL ++ +L+ I+ + +Y + KE +++ Sbjct: 129 SYELDLFG-RLDAERLSSFENLQASAYDYWAMRLSTIASVANAYWQYAYAKEAVALGEAD 187 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L ++ +EL + GA L+ ++ + + + ++ LLG Sbjct: 188 LKDSERRLELIRSMYEAGAADGLAYDTAMVNHLQVQEALEQRNNNLALARTALTALLGLT 247 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A + + + +++ P+ I + IP+ L+ RPD+ E L + A +A LY Sbjct: 248 ADKDVE-VSALNDSIVPD----IALEIPSALLSRRPDLMASEALLRKAYADYDVAALSLY 302 Query: 301 PSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY--I 356 P+ L+ ++ + + N + G + LP + ++ N R+ ++ Q+ + Sbjct: 303 PTFILSAGVSAGDTGTLGRFLANPLGTLGAAVTLPFLNYSEL--NARKGQAMTQKDISEL 360 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 + T +NA++EV +A+++I K +V+K +H L +++ YR G SL + LD Sbjct: 361 DFVNTYINAVREVSDAVSNITYYKNLVSKTEHEYTLARQNYDRYSERYRYGASSLSEFLD 420 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 AKR + S +DL +A+G Sbjct: 421 AADTLRSASDKYLNAKRMVLNSSMDLMVALGG 452 >gi|54296001|ref|YP_122370.1| hypothetical protein lpp0018 [Legionella pneumophila str. Paris] gi|53749786|emb|CAH11166.1| hypothetical protein lpp0018 [Legionella pneumophila str. Paris] Length = 461 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 213/468 (45%), Gaps = 54/468 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKL 64 L V L GC P Y +PH+ ++ ++S+ + KN+ NID+ + WW F D +LN+L Sbjct: 9 LLSVFLVGCYSEP-YHRPHVEVI-NKWSVKD-KNVKNIDSKNIPYIAWWRDFKDPTLNQL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPN 111 ++ L N ++ + I AA+ + +R P + + + FIPN Sbjct: 66 IERGLISNTSLGMSRGSIEAAEGELKKIRYQWVPTLDLMTGYSRNPATGFPGVLIVFIPN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + I++ Q R + + L A+ D KL +IS++ SY Sbjct: 126 ------------YTINIINQIREQKRAKYTLAQVKAEDDALKLTIISQITASYFTYLAEI 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + +++ + G +S++ +L +++ I+ ++ E++ ++ + Sbjct: 174 ERKEFLQTLANDLTQLAKVASKVYQGGLSSEIEQEELYSQVNLIQGELEVTERNIVISRN 233 Query: 232 NISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LL E +Q +++ P +P ++ NRPD++ E +L S Sbjct: 234 ALRYLLNQNPGEIKTVKKLLQLKNHKLIPG-------SLPLTVLENRPDMQVAENRLRAS 286 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIR 345 IG+A+S+L P++ L+ G +A D+ + F +L PI D + + Sbjct: 287 HEGIGVAESNLLPTIQLDYIGGLA-AGDSRYALPKKTVKFNDQLLKAPIIDM-PVLGAVA 344 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 +A+ + Y + +T+ A+++ NAL+ E++++ KL+ K K+ +L+ Sbjct: 345 KAKGVNKVSYYNYIDTLQKALRDTTNALS---ENERLTNKLKQTASAQKHLAKAYNLNDR 401 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S ++ L+ + + K+ + L+ K Q S V LY + GY Sbjct: 402 LYQTGIQSYIETLNSKISLDKINISLNQDKLQELLSIVRLYQELAGGY 449 >gi|150004234|ref|YP_001298978.1| putative transport related, lipoprotein [Bacteroides vulgatus ATCC 8482] gi|254884748|ref|ZP_05257458.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319644189|ref|ZP_07998714.1| transport-like protein [Bacteroides sp. 3_1_40A] gi|149932658|gb|ABR39356.1| putative transport related, lipoprotein [Bacteroides vulgatus ATCC 8482] gi|254837541|gb|EET17850.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384311|gb|EFV65282.1| transport-like protein [Bacteroides sp. 3_1_40A] Length = 457 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/457 (22%), Positives = 209/457 (45%), Gaps = 38/457 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L+ C + +Y KP + + + + + NI L W E F D L +L++ L+ N Sbjct: 15 LSSCGIYTQY-KPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDPRLQELIEQGLRNN 73 Query: 73 LTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS-TGQLDSDWKIDL 128 + A R+ A+ +LS + PS S + F + T + + W+ID+ Sbjct: 74 TDLQSAQWRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQTYTLPVAASWEIDI 133 Query: 129 FGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R+ + + A L+ + + +I+ + +Y +++I+ + +K+ Sbjct: 134 FGRIRNAKRQAKALLEQSRDYKQAVRTQLIAGIANTYYTLLMLDNQLAISVRTEKSWKET 193 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 ++ + G ++ ++ ++EA +I + + L++ +++S LL E H Sbjct: 194 VDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLSLLLA----ESPHA 249 Query: 248 MQKQS---NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 +++ +++ + P+ GIP ++ NRPD+R E+ L + A+S YPS+ Sbjct: 250 IERTGTWDSSYMMKEHFPV--GIPVQMLANRPDVRSAERSLEAAFYATNQARSAFYPSIV 307 Query: 305 LNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+GS T+ PG + L P+F+KG + ++ A++ +E +++Q+ Sbjct: 308 LSGSAGWTNSAGSMIVNPGKFIATAVA-SLTQPLFNKGANIAQLKIAKAQQEEAKLSFQQ 366 Query: 361 TVLNAIKEVENALT--------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +LNA EV AL S+ DK+I L A+E S SL M + G + L Sbjct: 367 ALLNAGSEVNEALVKYQTARDKSVYYDKQI-NSLNKALE----STSLLM---QHGNTTYL 418 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L ++ E+ + + ++LY A+G G Sbjct: 419 EVLTAQQTLLNAELTQVANRFTEMQGVINLYQALGGG 455 >gi|224536752|ref|ZP_03677291.1| hypothetical protein BACCELL_01628 [Bacteroides cellulosilyticus DSM 14838] gi|224521668|gb|EEF90773.1| hypothetical protein BACCELL_01628 [Bacteroides cellulosilyticus DSM 14838] Length = 462 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 191/461 (41%), Gaps = 37/461 (8%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L ++ ++ + N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPEDITAAGLYRDTTAVNDTLAADTANFGNLPWREVFTDPQLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 AL N + A + A+ ++S R P S ++S + + + Sbjct: 73 QALANNPDLRSAALNVKKAEAALMSARLAYAPTLALSPQGTVSSWDKGKATQTYSLPVTA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFGQ +R + SL Y Q + VI+ + Y ++ I Sbjct: 133 SWQIDLFGQILNPKRGAQVSLKQTQF-YEQA--VQTQVIANVANMYYTLLMLDRQLQITE 189 Query: 179 QILDLYKKNIELSHLKFTQGA--TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 D+ KKN+E G T+ + + A + + +P + +S R + + + Sbjct: 190 STADILKKNVETVEAMKDAGIYNTTSAGVEQTRAAYAQVLASLPGMRQSIRETENALCLM 249 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L PA E N +P + GIP L+ NRPD++ E LA S Sbjct: 250 LNQPAQEI-------ERGVLENQQLPTEFSAGIPLQLLSNRPDVKAAEMSLAASYYDTNS 302 Query: 295 AKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ YP ++L+GS T+ PG + G L P+F +G + +++A++ Sbjct: 303 ARAAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGANIARLKQAKAQ 361 Query: 351 AQEQYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ I +Q T+L A EV NAL + +K I ++Q V +K+ + + G Sbjct: 362 EEQSKIQFQTTLLKAGNEVSNALYQYQMTSEKAISREIQ--VNSARKAAEDTKELFNLGT 419 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + L++L E++ + ++ + LY A+G G Sbjct: 420 STYLEVLSAEQSYLSAQTSEVSDTFDRMQAVISLYQALGGG 460 >gi|166712709|ref|ZP_02243916.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 490 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/417 (21%), Positives = 186/417 (44%), Gaps = 19/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP- 110 WW D L+ L+ LQ + ++ A R++ + I + +A+ PS S + + Sbjct: 59 WWRGLGDVQLDALIAEGLQHSPSLAAADARLHQVQARIDTAQANRGPSLSVSGGYTGLQL 118 Query: 111 ---------NLKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 K + QL +++ +DL+G +R E+++ +A A+LN+ S Sbjct: 119 PESLVGEELGGKYGGSAQLALEFRYGVDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSS 178 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + +A+ L +K +EL+ + + G S+L + + +A + + + Sbjct: 179 AIAEGYAQLAYAWSLHDLANDELGRAQKLLELTRQRRSAGIDSELQVRQAQARVPAAQQQ 238 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + ++ ++ L+G L + + + +PADL+ RPD+ Sbjct: 239 LQSAQQQIDEARTALAALVGQGPDRGLDIARPALGG---GIATQLPSMLPADLLGRRPDV 295 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIF 335 ++ + I +AK+ YPSL+L + + + ++ FG P L LPIF Sbjct: 296 VAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLDSGSVFGLVAPALSLPIF 355 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D GK+++N+ +++ + + V++A++EV + +T++ ++ AV+ Sbjct: 356 DGGKLRANLAVSDAQYDLAVADYNQKVISALREVADQVTAVRSLQQRAQTQNDAVQTAMA 415 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L+ YR G S L++L ++ ++ + Q + V L A+G G+ P Sbjct: 416 AFDLAQQRYRAGIGSYLEVLRVQEQVLVARQRMAGLQSQQLLASVRLQRALGGGFTP 472 >gi|315297096|gb|EFU56376.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 16-3] Length = 435 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 89/408 (21%), Positives = 192/408 (47%), Gaps = 18/408 (4%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 WE FND +L+ + + + N I A RI+ A+ + P+ A++S L Sbjct: 31 WEEFNDPNLDNWLHLVMTSNNDIAIAALRIHRAQLDAERTGITNTPTLKAALSMDGKKQL 90 Query: 113 KTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +S + L + +++DL+G+ R + + + ++ A+L ++S+ +Y Sbjct: 91 NNSSGWAKSGSASLGTSYELDLWGKIARQRDVAEWAVHASEEDFRSARLMLLSEASNNYW 150 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++I+ Q +D K+ + L+ +++ G S L ++ + + + E+ + L++ Sbjct: 151 RIGFVNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLDVIDAQQNLLTQENQLTGLQRE 210 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 ++ + LLG P + + P +P +N IPA ++ RPDI +E Sbjct: 211 HSQLLNQQAVLLGTVPGCQIVEPTTL------PKGSLPKVNANIPASILMRRPDISAKEW 264 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIK 341 +L +++A + I +S+ YP+ +L G++ T S +N S G L LP + + Sbjct: 265 QLREALATVDIKRSEYYPTFNLTGALG-TSSASLLALLHNPVGSVGANLTLPFLEWRQRD 323 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++ A + +++ + +++ + A+ +E+AL+ N+ T+L+ +EL +KS L+ Sbjct: 324 IEVKIARNDYEQRVLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNE 383 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + YR G + LD + + E+ L + ++ +Y+ G Sbjct: 384 VRYRHGAVRISFWLDAQEKRRQAELRLDENRFNQLQNLAKIYLEFGGA 431 >gi|253998790|ref|YP_003050853.1| NodT family RND efflux system outer membrane lipoprotein [Methylovorus sp. SIP3-4] gi|253985469|gb|ACT50326.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylovorus sp. SIP3-4] Length = 523 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 96/432 (22%), Positives = 188/432 (43%), Gaps = 44/432 (10%) Query: 10 LFIVLLA-------GCTVGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLKWWESFNDT 59 LF VLLA GC T + Q +GN S I WW+ ++D Sbjct: 30 LFAVLLACSLVGLPGCVSMRGITPQATAVQANQLDLGNTVISAASIEWPNAAWWKDYHDA 89 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--------RFIP- 110 L+ LV + N + A RI A+ + A P+ + +FIP Sbjct: 90 QLDALVTSTIADNPDLKAAQARIGLAQAYADIMHAQTLPTLSGDTTMTRERFTELQFIPA 149 Query: 111 ----NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + N+ + + +DL+G+++ I ++L ++ A+ +L +++ ++ SYI Sbjct: 150 PWAGHTDWNNRATVSLAYDLDLWGKQKGIWAAALDETHASAAETQQVQLELVNAVVRSYI 209 Query: 166 DARHFKERISIAHQILDLYKKNI-ELSHL------KFTQGATSKLSLVKLEAEIKSIESD 218 R+ +Q+ D+ ++++ E+ H + G T++L++ + E + Sbjct: 210 -------RLGFEYQLRDIAEEHVREVEHRVAIGRRALSAGLTTELAVTETEVPLPMARMK 262 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + +E + + ++ L G H +Q+ ++ + +P + P +LI RPDI Sbjct: 263 VQQIEARIALIQNQLAALSGQGPGAGEH-IQRPVLHYDATIGLPDQL--PVNLIGRRPDI 319 Query: 279 RYQEKKLADSVAKIGIAKSDLYPS---LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ S I AK++ YP+ L+ G AL F GP + LPIF Sbjct: 320 LASRWRIEASREYIASAKANFYPNINLLAFAGFQALGFGKLFSNAAAIAGVGPAISLPIF 379 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++N+ +S + TVL A++ + N L +N + + + + A+ +K Sbjct: 380 DGGRRRANLSAQTASYDMAVEHYNATVLKALESISNQLVLLNANAREIKNAEEALTTAEK 439 Query: 396 SMSLSMINYRQG 407 + +L++ +Y+ G Sbjct: 440 AHALALRHYKAG 451 >gi|307608768|emb|CBW98151.1| hypothetical protein LPW_00171 [Legionella pneumophila 130b] Length = 461 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 54/468 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKL 64 L V L GC P Y +PH+ ++ ++S+ + KN+ NID+ + WW F D +LN+L Sbjct: 9 LLSVFLVGCYSEP-YHRPHVEVI-NKWSVKD-KNVKNIDSKNIPYIAWWRDFKDPTLNQL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPN 111 ++ L N ++ + I AA+ + +R P + + + FIPN Sbjct: 66 IERGLISNTSLGMSRGSIEAAEGELKKIRYQWVPTLDLMTGYSRNPATGFPGVLIVFIPN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + I++ Q R + + L A+ D KL +IS++ SY Sbjct: 126 ------------YTINIINQIREQKRAKYTLAQVKAEDDALKLTIISQITASYFTYLAEI 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + +++ + G +S++ +L +++ I+ ++ E++ ++ + Sbjct: 174 ERKEFLQTLANDLTQLAKVASKVYQGGLSSEIEQEELYSQVNLIQGELEVTERNIVISRN 233 Query: 232 NISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LL E +Q ++ P +P ++ NRPD++ E +L S Sbjct: 234 ALRYLLNQNPGEIKTVKKLLQLKNRKLIPG-------SLPLTVLENRPDMQVAENRLRAS 286 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIR 345 IG+A+S+L P++ L+ G +A D+ + F +L PI D + + Sbjct: 287 HEGIGVAESNLLPTIQLDYIGGLA-AGDSRYALPKKTVKFNDQLLKAPIIDM-PVLGAVA 344 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 +A+ + Y + +T+ A+++ NAL+ E++++ KL+ K K+ +L+ Sbjct: 345 KAKGVNKVYYYNYIDTLQKALRDTTNALS---ENERLTNKLKQTASAQKHLAKAYNLNDR 401 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S ++ L+ + + K+ + L+ K Q S V LY + GY Sbjct: 402 LYQTGIQSYIETLNSKISLDKINISLNQDKLQELLSIVRLYQELAGGY 449 >gi|302188556|ref|ZP_07265229.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 468 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 111/464 (23%), Positives = 207/464 (44%), Gaps = 33/464 (7%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSQWLPATAGQPVASASVPTD-IEWQNFFIDNRLVRLQTL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNS--------- 116 AL N + A+ + A+ RA P+ AS S H P+ + + Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPSSTSMTGGSSISHEY 130 Query: 117 TGQLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 131 SAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAAD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 187 NQLLKLAEDTLASQQKSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQDR 246 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + + L+G E L + Q + + G+P+ L++ RPD+ E L + Sbjct: 247 NALRLLVGSDLPEELLPNADMQSVAQ---LVQVPDGLPSSLLQRRPDVLSAEHTLKAANI 303 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS++L S + + F WSF P + +PIFD G ++ + A Sbjct: 304 DIGAARAAFFPSITLTASAGSSSSSLSGLFKSGTGAWSFAPSISVPIFDGGANRATLDSA 363 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ YR G Sbjct: 364 KVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALYRGG 423 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 424 SQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 467 >gi|301308765|ref|ZP_07214717.1| putative outer membrane efflux protein [Bacteroides sp. 20_3] gi|300833289|gb|EFK63907.1| putative outer membrane efflux protein [Bacteroides sp. 20_3] Length = 480 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 205/476 (43%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE + LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELSMDERISLPESGEMGMNDTTF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFRQSMERIAMSRAALRRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + SIE + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKREGAETQLAVDQFYARVLSIEGKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E +L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMELIASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRDEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|300905116|ref|ZP_07122920.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|301306709|ref|ZP_07212765.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|300402985|gb|EFJ86523.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|300838068|gb|EFK65828.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|315252825|gb|EFU32793.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 85-1] gi|315285088|gb|EFU44533.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 110-3] gi|323948641|gb|EGB44550.1| outer membrane efflux protein [Escherichia coli H252] Length = 435 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 89/408 (21%), Positives = 192/408 (47%), Gaps = 18/408 (4%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 WE FND +L+ + + + N I A RI+ A+ + P+ A++S L Sbjct: 31 WEEFNDPNLDNWLHLVMTSNNDIAIAALRIHRAQLDAERTGITNTPALKAALSMDGKKQL 90 Query: 113 KTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +S + L + +++DL+G+ R + + + ++ A+L ++S+ +Y Sbjct: 91 NNSSGWAKSGSASLGTSYELDLWGKIARQRDVAEWAVHASEEDFRSARLMLLSEASNNYW 150 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++I+ Q +D K+ + L+ +++ G S L ++ + + + E+ + L++ Sbjct: 151 RIGFVNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLDVIDAQQNLLTQENQLTGLQRE 210 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEK 283 ++ + LLG P + + P +P +N IPA ++ RPDI +E Sbjct: 211 HSQLLNQQAVLLGTVPGCQIVEPTTL------PKGSLPKVNANIPASILMRRPDISAKEW 264 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIK 341 +L +++A + I +S+ YP+ +L G++ T S +N S G L LP + + Sbjct: 265 QLREALATVDIKRSEYYPTFNLTGALG-TSSASLLALLHNPVGSVGANLTLPFLEWRQRD 323 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++ A + +++ + +++ + A+ +E+AL+ N+ T+L+ +EL +KS L+ Sbjct: 324 IEVKIARNDYEQRVLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNE 383 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + YR G + LD + + E+ L + ++ +Y+ G Sbjct: 384 VRYRHGAVRISFWLDAQEKRRQAELRLDENRFNQLQNLAKIYLEFGGA 431 >gi|82702850|ref|YP_412416.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] gi|82410915|gb|ABB75024.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] Length = 478 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 101/463 (21%), Positives = 210/463 (45%), Gaps = 36/463 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC K +PL P F + + T+ + F+D +L+ L+ IA+ N I Sbjct: 22 GCIPKVAIKKADVPL-PATFE-PDVFETTSTATVMRKDFFDDPALSDLLDIAVANNKEIN 79 Query: 77 QATERINAAKENILSVRAD-LFP----------------SSYASISH------RFIPNLK 113 +RI A+ I + R L P + + +I + P Sbjct: 80 IMLQRITIAQNEIQARRGQYLMPLVGIRAGAGGDKVGEFTRFGAIEEELPLAGKHFPTFL 139 Query: 114 TNSTGQLDSDWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + +L S W++D++ + R+ + L + S Q + N+++ + SY + Sbjct: 140 GDFRFELFSTWEVDIWKRLRNARQVAVLEYMASKEGQ-NFLVTNLVADVAHSYYELLALD 198 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + I Q + + + +E+ T+ L++ + EAE+ +S+I +++ + + Sbjct: 199 NHLEILEQNIRIQENALEMVKQLLLYARTTALAVKRYEAEVAKNKSNIYKIKQDITVVEN 258 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 I+ LLG +Q+ S+ F + GIP+ L++NRPDIR E +L+ + Sbjct: 259 RINFLLGRTP----QPIQRASSGFMEQNPKVLMTGIPSQLLQNRPDIRQAELELSAAELN 314 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----KLYLPIFDKGKIKSNIRRA 347 I +A+++ +P+ ++N + +NT S +L P+ ++ I++ + A Sbjct: 315 IKVARANFFPTFNINAGVGFEAFAVKYLFNTPQSLAAAVAGELVAPVINRYAIRAEYKNA 374 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + ++++++NA EV N +++I++ KK VE +S+ ++ ++ Sbjct: 375 SARQIQAAYEYEQSIINAYVEVANQISNIDKLKKNYQLKTSQVEALVQSIDVASQLFKSA 434 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R LD+L +R T + + DL +++ + VDLY ++G G+ Sbjct: 435 RTDYLDVLLTQRDTLEAKQDLIETQQKQFDAMVDLYRSLGGGW 477 >gi|312794787|ref|YP_004027709.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312166562|emb|CBW73565.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 478 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 107/482 (22%), Positives = 212/482 (43%), Gaps = 47/482 (9%) Query: 2 NILRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN---------------- 43 + R + SL VLLAGC + P + L P +S ++ Sbjct: 6 TVPRHLLSLVCAAVLLAGCVNARRQSLPAVKL-PAHWSAYDAAGATTKTPCSAVSDTSEP 64 Query: 44 ----LINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 LI D WW F D L++L+ AL N + A R+ A+ V +L P+ Sbjct: 65 CATALIPTD---WWRGFGDPVLDRLIDDALAVNNDLAAAAIRVYRAQLQAGLVATNLAPT 121 Query: 100 SYASISHRF--IPNLK-----TNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD-- 150 + + R P+ + +N G L +++DL+G + + +A +A Q D Sbjct: 122 ATLGGNGRVSRTPDSRQTSHASNLYGSLS--YELDLWG-KLAAQRDVARWKAAATQADHD 178 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+L++I + Y + ++I++ + + ++ + L + GA S L + + E Sbjct: 179 AARLSLIGTIAALYWQIGYLNQQIALGNANIAYAQRTLALVRTRHAAGAVSGLDVAQAEQ 238 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPA 269 + + L + N H ++ L P + P+ +P+ G+PA Sbjct: 239 SLSVQRAAQMQLIQQRTENRHALAILFDRPPQ-----ARAAEPAALPHRVLPVVPAGLPA 293 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFG 327 DL+R RPD+R E +L +S+A + +A++ YPS +L GS+ T S N + Sbjct: 294 DLLRRRPDLRAAECRLRESLANVDVARTRFYPSFTLTGSVG-TSSASLERVLSNPVAALS 352 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L LP ++ I+ + + +E + +++ + A+ EVENAL++ + ++ + Sbjct: 353 LELALPFIQWNTMQLQIKVSRTQYEEAVVNFRQQLYTALGEVENALSARVQLEREGEQRT 412 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ +++ +L+ + G S+ LD ++ + ++ + + ++LY A+G Sbjct: 413 LSLLQAQRAEALARARFVAGATSVQPWLDEQQRLRDAQSTSALNRLNQLNNQMNLYKALG 472 Query: 448 SG 449 G Sbjct: 473 GG 474 >gi|84623546|ref|YP_450918.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367486|dbj|BAE68644.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 505 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 188/426 (44%), Gaps = 37/426 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP- 110 WW + D L+ L+ LQ + +++ A R++ + I + +A+ PS S + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLVAADARLHRVQARIDTAQANRGPSLSVSGGYTGLQL 133 Query: 111 ---------NLKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 K + QL ++ +DL+G +R E+++ +A A+LN+ S Sbjct: 134 PESLVGEEIGGKYGGSAQLALKFRYGVDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSS 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + +A+ L +K +EL+ + + G S+L +++ ++ Sbjct: 194 AIAEGYAQLAYAWSLHDLANDELGRAQKLLELTRQRRSAGIDSEL-------QVRQAQAR 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------IPA 269 +P ++ + I A L + Q + ++ P+ G +PA Sbjct: 247 VPAAQQQLQSAQQQIDE-----ARTALAALVGQGPDRGLDIARPVLGGGIATQLPSMLPA 301 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-- 327 DL+ RPD+ ++ + I +AK+ YPSL+L + + + ++ FG Sbjct: 302 DLLGRRPDVVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLDSGSVFGLV 361 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L LPIFD GK+++N+ +++ + + V++A++EV + +T++ ++ Sbjct: 362 APALSLPIFDGGKLRANLAGSDAQYDLAVADYNQKVISALREVADQVTAVRSLQQRAQAQ 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV+ + L+ YR G S L++L ++ ++ + Q + V L A+ Sbjct: 422 NDAVQTAMAAFDLAQQRYRAGIGSYLEVLRVQEQVLVARQRMAGLQSQQLLASVRLQRAL 481 Query: 447 GSGYNP 452 G G+ P Sbjct: 482 GGGFTP 487 >gi|163857386|ref|YP_001631684.1| outer membrane efflux protein [Bordetella petrii DSM 12804] gi|163261114|emb|CAP43416.1| probable outer membrane efflux protein [Bordetella petrii] Length = 500 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 94/467 (20%), Positives = 205/467 (43%), Gaps = 39/467 (8%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +++L+GC ++P L + + + + ++WW + D L+ L+ AL Sbjct: 35 LLLVLSGCAWMAPTSEPVAQLDAARLGLQGTS--VTWPDVQWWRRYGDAQLDTLMTEALA 92 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYA--SISHRFIP-----------NLKTNST 117 N ++ A R+ A + RA LFP A S++ + +P + +++ Sbjct: 93 SNPSMTAAQARLAQANAAVRGARAPLFPQVDANYSLTRQHLPENYIYQPPLAGGVSSDNR 152 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP-SYIDARHFKERISI 176 LD +++D +G+ R + + + +A A N++++ + SY++ ++ + + Sbjct: 153 LALDFSYELDFWGKNRSLLDAAVSRQAAAEADAQAARNLLARAVTRSYLNLQNAFAQHDV 212 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +IL + ++L+ + G + + + + E+ + + + ++ +E + + ++ L Sbjct: 213 LQRILAQREDVLKLTQGRQNAGLDTLVEVKQAESSLATAKVELTQIETTIAQLRNQVAAL 272 Query: 237 LGY-PATEFLHYMQKQSNNFQP-NLYIPINI---GIPADLIRNRPDIRYQEKKLADSVAK 291 G PA + QP L P + +P DL+ +R D+ + + Sbjct: 273 AGAGPA---------RGQQLQPVKLAAPAGVLPDSVPLDLLGHRADVTAARWRAEAARHN 323 Query: 292 IGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + A++ YP+++L G A+ N + GP + LPIF G + +N+ Sbjct: 324 VDAARAQFYPNINLVAFAGFQAIGTANLLDAGSRTLGIGPAITLPIFHGGALNANLAGRR 383 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + A + + VL+A+++V +AL ++ + + + A + L++ YR G Sbjct: 384 ADADLAVADYNQNVLDAVRQVADALDALRLLGRETAQQRQARTAIDAAYDLAVQRYRAGM 443 Query: 409 YSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + L +L + A+++ DL QL DL A+G GY P Sbjct: 444 GNYLTVLVAQTGVLTQARLDTDLRFRAYQLD---ADLAYALGGGYTP 487 >gi|270294943|ref|ZP_06201144.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274190|gb|EFA20051.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 461 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 111/473 (23%), Positives = 207/473 (43%), Gaps = 41/473 (8%) Query: 4 LRAIFSLFIV--LLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWES 55 ++ I L LL+ C + Y +P L S+ ++ + N L W E Sbjct: 1 MKKIICLMCATALLSSCHIYKSYDRPEDITTAGLYRDTASVNDTLAADTANFGNLPWREV 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 F D L L++ AL N + A + A+ ++S R P+ S K Sbjct: 61 FTDPQLQTLIEQALTNNGDLRSAALNVKQAQAALMSARLAYAPTLALSPQGTVSSWDKGK 120 Query: 116 STG----QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 +T + + W+IDLFGQ +R + SL Y Q + VI+ + Y Sbjct: 121 ATQIYSLPVTASWQIDLFGQLLNPKRQAKVSLKQTQF-YEQA--VQTQVIAGVANMYYTL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ I +++ KKN+E G T+ ++ + + + +P + +S Sbjct: 178 LMLDRQLQITEGTVEILKKNLETVQAMKDAGIYGTTSAAVEQSRTAYAQVMASLPDIRQS 237 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R + + +L PA + ++ L ++GIP L+ NRPD++ E L Sbjct: 238 IRETENALCLMLHQPAQSIARGVLEEQQ-----LPTEFSVGIPLQLLSNRPDVKAAEMSL 292 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++ YP ++L+GS T+++ PG + G L P+F +G Sbjct: 293 AANYYNTNSARAAFYPQITLSGSGGWTNNSGAGIVNPGKLLASAIG-SLTQPLFYRGANI 351 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENA--LTSINEDKKIVTKLQHAVELHKKSMSL 399 + +++A++ ++ I +Q +LNA EV NA L + +DK + +Q V +++ S Sbjct: 352 ARLKQAKAQEEQAKIQFQTALLNAGNEVSNALHLYQMEKDKAVSRTIQ--VNSARQAASD 409 Query: 400 SMINYRQGRYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + + G + L++L E++ +A++ EV + + Q + + LY A+G G Sbjct: 410 TKELFNLGTSTYLEVLSAEQSYLSAQLAEVSDTFSSMQ---AVISLYQALGGG 459 >gi|221214925|ref|ZP_03587893.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221165152|gb|EED97630.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 548 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 103/469 (21%), Positives = 204/469 (43%), Gaps = 43/469 (9%) Query: 13 VLLAGC-TVG---PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +++AGC ++G P+ T+ L +I + WW ++ D L+ + A Sbjct: 19 LIMAGCASMGDNKPQSTRIDASALDAGAAIRAADRDAGWPASDWWRAYGDPQLDAWIAAA 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-----------HRFIPNLKT--- 114 N T+ A R+ A+ R+ P ++S + P T Sbjct: 79 QAGNPTLAAAQARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLADTDTW 138 Query: 115 NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 N+TG L + +DL+G+ ++ E +L + A AKL + ++ +Y+ Sbjct: 139 NNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYAL 198 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A Q + + +L+H + G ++L + + E+ + E I T E++ ++ H + Sbjct: 199 LDLARQTFERQRALADLAHKRLQAGIGTQLEVSQAESTLPDYERQIDTYEEAIQLARHQL 258 Query: 234 STLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLAD 287 + L G A + + +P L + G+P ADL+ RPD+ + + D Sbjct: 259 AALAGKGPGAGDAIR---------RPKLSLDAPAGLPSALPADLLGRRPDV-VAARWMVD 308 Query: 288 SVAK-IGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A+ I +AK+ YP++ L G +T + N W+ GP L LPIF+ G+++ Sbjct: 309 AQARGIDVAKAAFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLR 368 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A + + +T++ A+K++ + + I +V +++S LS Sbjct: 369 AQLGAANAGYDRAVEHYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANERSYRLSR 428 Query: 402 INYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 +R+G +++L ++ + E I +LA V L A+G G Sbjct: 429 EGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAV-LMAALGGG 476 >gi|209516512|ref|ZP_03265367.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209503116|gb|EEA03117.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 487 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/406 (22%), Positives = 181/406 (44%), Gaps = 56/406 (13%) Query: 18 CTVGPEYTKPHMPLLPTQFSI----------GNSKNLINIDTL---KWWESFNDTSLNKL 64 C+ GP P MP P + + G ++ +WW + +L+ L Sbjct: 21 CSFGPSGEPPAMPS-PGHYGVEAQPSKTVAAGGVAQTFDVGAAGVPQWWRLYRSDALDAL 79 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---------FIPNLKTN 115 V L+ N L AT+R A+ + L RA + S+ SI +P L Sbjct: 80 VDEGLR-NSPTLAATQRTLASAQEQL--RAQVGASTLPSIDGAAQIERARTPVVPGLGPE 136 Query: 116 S------TGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 GQ+ + + DLFGQ R++ S S A ++ +++ ++ + + + + I+ Sbjct: 137 QVQYNFFAGQIFTHYTFDLFGQTRYMNSASAARVNVQEFELEASRRALAANIAGTAINVA 196 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +I++ +++ + ++ G+ S+ + + + +I + +P+L + Sbjct: 197 ALDRQIALTERLVAVSNDAANEDQQRYALGSVSRAQALASKQDAAAIAATLPSLRQQRAS 256 Query: 229 NVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQ 281 ++H ++ L+G P+ L +L +P + + +P+DL+R+RPDI Sbjct: 257 SIHALAVLMGRTPDNAPSVPELD-----------SLSLPQHVPVAVPSDLLRSRPDIEAA 305 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIFDK 337 + + + A +G A + +YPSLSL S+ S+P G W+ G L PIF Sbjct: 306 DAAVKAAAADVGAATAQMYPSLSLTASMG-RGGFSWPAVTSGAGALWAIGAGLSQPIFHG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 G + + R + + + ++ TVL+A ++V N+L +++ D + + Sbjct: 365 GALFAQRRASIDAYDAAVLHYKATVLSAFQDVANSLAALDNDAQTL 410 >gi|56477381|ref|YP_158970.1| putative outer membrane protein [Aromatoleum aromaticum EbN1] gi|56313424|emb|CAI08069.1| putative outer membrane protein [Aromatoleum aromaticum EbN1] Length = 475 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 99/455 (21%), Positives = 197/455 (43%), Gaps = 29/455 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC PL P ++G + + ++ WW+ F D L+ L+ AL N ++ Sbjct: 22 GCASFAGIEPASRPLAPA--ALGTASDPVDWPAAAWWQGFADPVLDGLIAQALAGNPSLA 79 Query: 77 QATERINAAKENILSVRADLFP-------------SSYASISHRFIPNLKTNSTGQLDSD 123 A R+ A+ + L P S +A + +++T S +L+ Sbjct: 80 LAESRLAKARALAGVAESALGPQLNADIDSTRRRFSEHADVPPPLAGSMQTISHARLNGS 139 Query: 124 WKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W++D FG+ R ++++L + +A A A++ + S + +Y E+ +A L Sbjct: 140 WELDFFGRNRAALDAALGSARAAEADAQAARVLLASDVARAYFRLAALLEQRGVARATLT 199 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++L + G S + + + E + I D+ L++ + H ++ L G Sbjct: 200 QRRAILQLVDSRVQAGLDSNVEVRQAEGALPEIRRDLEALDEQIGLARHALAALAGQ-GP 258 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 E + +P +P + PADL+ R D+ ++ + I AK+ YP+ Sbjct: 259 EAAAELAPTLATVRPQ-ALPATL--PADLVGRRADLAAARWRVEAATRGIDAAKAAFYPN 315 Query: 303 L---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 + +L G ++ N + G ++LPIFD G++++ +R + A ++ Sbjct: 316 INLVALAGFSSIGLGNWLKSGSRELGLGAAVHLPIFDAGRLRAGLRGTTADADAAVDSYN 375 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T+L A++EV + +TS ++ + Q A+ + ++ L++ YR G L +L E Sbjct: 376 ATLLQAVREVADQITSQQAVERQAREQQAALAAAESALDLALQRYRAGIGGYLTVLSAET 435 Query: 420 ---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +DL K + + + L A+G GY Sbjct: 436 NVLTQRRTAIDL---KARGIDTRLQLIRALGGGYT 467 >gi|160888594|ref|ZP_02069597.1| hypothetical protein BACUNI_01011 [Bacteroides uniformis ATCC 8492] gi|156861908|gb|EDO55339.1| hypothetical protein BACUNI_01011 [Bacteroides uniformis ATCC 8492] Length = 461 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 108/462 (23%), Positives = 203/462 (43%), Gaps = 39/462 (8%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L S+ ++ + N L W E F D L L++ Sbjct: 12 ALLSSCHIYKSYDRPEDMTTAGLYRDTASVNDTLAADTANFGNLPWREVFTDPQLQTLIE 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 AL N + A + A+ ++S R P S ++S + + + Sbjct: 72 QALTNNGDLRSAALNVKQAQAALMSARLAYAPMLALSPQGTVSSWDKGKATQIYSLPVTA 131 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W++DLFGQ +R + SL Y Q + VI+ + Y ++ I Sbjct: 132 SWQVDLFGQLLNPKRQAKVSLKQTQF-YEQA--VQTQVIAGVANMYYTLLMLDRQLQITE 188 Query: 179 QILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +++ KKN+E G T+ ++ + + + +P + +S R + + + Sbjct: 189 GTVEILKKNLETVQAMKDAGIYGTTSAAVEQSRTAYAQVMASLPDIRQSIRETENALCLM 248 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L PA + ++ L ++GIP L+ NRPD++ E LA S A+ Sbjct: 249 LHQPAQSIARGVLEEQQ-----LPTEFSVGIPLQLLSNRPDVKAAEMSLAASYYNTNSAR 303 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YP ++L+GS T+++ PG + G L P+F +G + +++A++ + Sbjct: 304 AAFYPQITLSGSGGWTNNSGAGIVNPGKLLASAIG-SLTQPLFYRGANIARLKQAKAQEE 362 Query: 353 EQYITWQETVLNAIKEVENA--LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + I +Q +LNA EV NA L + +DK + +Q V +++ S + + G + Sbjct: 363 QAKIQFQTALLNAGNEVSNALHLYQMEKDKAVSRTIQ--VNSARQAASDTKELFNLGTST 420 Query: 411 LLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L E++ +A++ EV + + Q + + LY A+G G Sbjct: 421 YLEVLSAEQSYLSAQLAEVSDTFSSMQ---AVISLYQALGGG 459 >gi|320324857|gb|EFW80929.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320329222|gb|EFW85219.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 462 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 196/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D WW+ F LN+L++ A + + + A R+ A+ + + Sbjct: 31 PARWAFAQSAAAQRSDA-HWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALQSLRASEFDQATVELALLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSELLTRRPDLAKAEAELAVAQANVTVARAAMLPKLTLSARLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKKSMSLSMIN--YRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + ++ Y +G LL +L+ +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|294774961|ref|ZP_06740491.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] gi|294451170|gb|EFG19640.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] Length = 457 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 105/457 (22%), Positives = 209/457 (45%), Gaps = 38/457 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 L+ C + +Y KP + + + + + NI L W E F D L +L++ L+ N Sbjct: 15 LSSCGIYTQY-KPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDPRLQELIEQGLRNN 73 Query: 73 LTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNS-TGQLDSDWKIDL 128 + A R+ A+ +LS + PS S + F + T + + W+ID+ Sbjct: 74 TDLQSAQWRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQTYTLPVAASWEIDI 133 Query: 129 FGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FG+ R+ + + A L+ + + +I+ + +Y +++I+ + +K+ Sbjct: 134 FGRIRNAKRQAKALLEQSRDYKQAVRTQLIAGIANTYYTLLMLDNQLAISVRTEKSWKET 193 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 ++ + G ++ ++ ++EA +I + + L++ +++S LL E H Sbjct: 194 VDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLSLLLA----ESPHA 249 Query: 248 MQKQS---NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 +++ +++ + P+ GIP ++ NRPD+R E+ L + A+S YPS+ Sbjct: 250 IERTGTWDSSYMMKEHFPV--GIPVQMLANRPDVRSAERSLEVAFYATNQARSAFYPSIV 307 Query: 305 LNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+GS T+ PG + L P+F+KG + ++ A++ +E +++Q+ Sbjct: 308 LSGSAGWTNSAGSMIVNPGKFIATAVA-SLTQPLFNKGANIAQLKIAKAQQEEAKLSFQQ 366 Query: 361 TVLNAIKEVENALT--------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +LNA EV AL S+ DK+I L A+E S SL M + G + L Sbjct: 367 ALLNAGSEVNEALVKYQTARDKSVYYDKQI-NSLNKALE----STSLLM---QHGNTTYL 418 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++L ++ E+ + + ++LY A+G G Sbjct: 419 EVLTAQQTLLNAELTQVANRFTEMQGVINLYQALGGG 455 >gi|7804905|gb|AAF70174.1|AF245661_1 CusC [Escherichia coli] Length = 340 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 28/339 (8%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKL 330 A++ +PS+SL I+ + F + W+F PK+ Sbjct: 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKI 338 >gi|52840274|ref|YP_094073.1| outer membrane efflux protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627385|gb|AAU26126.1| outer membrane efflux protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 461 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 212/468 (45%), Gaps = 54/468 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSLNKL 64 L V L GC P Y +PH+ ++ ++S+ + KN+ NID+ + WW F D +LN+L Sbjct: 9 LLSVFLVGCYSEP-YHRPHVEVI-NKWSVKD-KNVKNIDSKNIPYIAWWRDFKDPTLNQL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISHRFIPN 111 ++ L N ++ + I AA+ + +R P + + + FIPN Sbjct: 66 IERGLISNTSLGMSRGSIEAAEGELKKIRYQWVPTLDLMTGYSRNPATGFPGVLIVFIPN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + I++ Q R + + L A+ D KL +IS++ SY Sbjct: 126 ------------YTINIINQIREQKRAKYTLAQVKAEDDALKLTIISQIAASYFTYLAEI 173 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ER + + + +++ + G +S++ +L +++ I+ ++ E++ ++ + Sbjct: 174 ERKEFLQTLANDLTQLAKVASKVYQGGLSSEIEQEELYSQVNLIQGELEVTERNIVISRN 233 Query: 232 NISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + LL E +Q ++ P +P ++ NRPD++ E +L S Sbjct: 234 ALRYLLNQNPGEIKTVKKLLQLKNRKLIPG-------SLPLTVLENRPDMQVAENRLRAS 286 Query: 289 VAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIR 345 IG+A+S+L P++ L+ G +A D+ + F +L PI D + + Sbjct: 287 HEGIGVAESNLLPTIQLDYIGGLA-AGDSRYALPKKTVKFNDQLLKAPIIDM-PVLGAVA 344 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMI 402 +A+ + Y + +T+ A+++ NAL+ E++++ KL+ K K+ +L+ Sbjct: 345 KAKGVNKVSYYNYIDTLQKALRDTTNALS---ENERLTNKLKQTASAQKHLAKAYNLNDR 401 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G S ++ L+ + + K+ + L+ K Q S V LY + GY Sbjct: 402 LYQTGIQSYIETLNSKISLDKINISLNQDKLQELLSIVRLYQELAGGY 449 >gi|296116743|ref|ZP_06835351.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] gi|295976711|gb|EFG83481.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] Length = 537 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 95/473 (20%), Positives = 207/473 (43%), Gaps = 36/473 (7%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-------WWESFN 57 A ++ L GC + P+Y H L P + + +++ WW FN Sbjct: 16 AGCAMMAAGLGGCVDLAPKYRHAHY-LYPDNW---QGEGIMHYGAPADGAPRGDWWVVFN 71 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SSYASISHRFI 109 D LN+L + A + N + A E A++ + L+P S+ S HR Sbjct: 72 DPLLNRLEERAGRLNPDLQAAAETFTQARDLSAEAASALYPQIGGNAGASNNQSSQHRLW 131 Query: 110 PNLKTNSTGQLDSD-------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + S W+ D + + R +A A +A+L++ S+L Sbjct: 132 RGAGAQGPTYMSSQQWGASVRWEPDFWSEIRNRKRMRQQQAQAAAADFAVARLSIQSELA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+ R + ++ + Y+ ++++ ++ + + + + + ++ + ++ Sbjct: 192 NDYMQLRGMDAQHAVYQDSIRYYQTAVQITQMRQAGAIAAGIDVSRAQTQLSATQASDTD 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+ + H I+ L+ + F H M F P + I +G+P+ L+ RPD+ Sbjct: 252 LQARRAVMEHAIAVLVNTSPSAF-HIMPITEIRF-PK--VKIAVGLPSTLLERRPDVASA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIFDKG 338 E+ +A + IG++++ YP ++ + ++A DN F N +++ + LP+F G Sbjct: 308 ERNMAQANRAIGVSRAAFYPHVTFS-AMAGFMDNGFTLDKVANGMYNYAAQAVLPLFQGG 366 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ ++R+ S ++ ++ TVL A K+VE+ L+ ++ + AV+ ++ + Sbjct: 367 MRRAELQRSWSQYRQAEDRYRATVLAAFKDVEDGLSLTHDLDVEAGQEGEAVKASLRTQN 426 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++M Y G + LD++ + A + + + ++ V+L A+G G++ Sbjct: 427 MTMQLYTGGLTNYLDVVVAQVAALTARIAQVQVETRYMQAQVELIRALGGGWD 479 >gi|237807068|ref|YP_002891508.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] gi|237499329|gb|ACQ91922.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] Length = 464 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 106/473 (22%), Positives = 214/473 (45%), Gaps = 35/473 (7%) Query: 1 MNILRAIFSLFIVLLAGC---TVGPEYTKPHMPLLPTQFSIGNSKNLINI-DTLK---WW 53 MN L ++ L + +L C T P K P P Q+ NL + + LK WW Sbjct: 1 MNKLSPLY-LALCILTACSQHTASPP-QKDLSPATPAQWQ----NNLFSAQEVLKQAHWW 54 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------R 107 ++F D +L++L++ L++N + A ++ A+ N +L P A++S + Sbjct: 55 QAFQDPALDQLIQQVLEKNNDLAVAALKVRQARLNAGLTATNLTPDLSAALSAEKQKTWQ 114 Query: 108 FIPNLKTNSTGQLDS----DWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLI 161 + +N T ++ ++++DL+G + E + AN ++ + D + L++I Sbjct: 115 QTAAVNSNDTATYNTALSLNYELDLWG-KLADERAAANFEAEATEQDRQASALSLIGTTA 173 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + E+I + + L ++ +++++ + GA SKL +++ E + S + Sbjct: 174 TLYWQQGYLNEQIRLNQESLTYTRQALKIANAHYQAGANSKLDVLQAEQSVASQLASHEL 233 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRY 280 L + N + ++ LL P L + P IP I G+PAD++ RPD++ Sbjct: 234 LLQQREENQNALAILLDQPPGATLPLP-----SALPVTPIPDIPAGLPADVLAQRPDVKA 288 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGK 339 E ++ A YP+ SL G+++ + N S G L LP + Sbjct: 289 AELRVRSDYATRQYTAKSYYPTFSLTGALSTGSEQLHSVLRNPTGSIGTGLTLPFIEWQT 348 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + +I + + ++ +++T A+ EVEN L++ ++L H++ L +++ ++ Sbjct: 349 TRLSIAKQQVVYEQTVRNFRQTFYTALSEVENQLSARQHYLNAASQLVHSLALAQQTETI 408 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + Y G + + L+ + E +L + Q + + LY A+G NP Sbjct: 409 TAVRYHAGEIEMQNWLEQQENRRTAEKELLDNRYQQLTTQLALYQALGG--NP 459 >gi|170695896|ref|ZP_02887036.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170139194|gb|EDT07382.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 537 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 100/450 (22%), Positives = 191/450 (42%), Gaps = 41/450 (9%) Query: 33 PTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 P G++ + D WW + D L+ ++ A N ++ A R+ A Sbjct: 39 PASLDAGSAIRAADADAQWPAADWWRVYGDPQLDAWIEAAQANNPSLAAAQARVREAMSM 98 Query: 89 ILSVRADLFPSSYASIS---HRFIPNL-----------KTNSTGQLDSDWKIDLFGQRRH 134 R+ P +S ++ NL N+TG L + +DL+G+ R+ Sbjct: 99 AGVARSAQAPQVNGDLSIKRQKWADNLYYGPGPLAGEQSWNNTGTLALSYHLDLWGKDRN 158 Query: 135 I-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 E +L + A A+L + + ++ +YI + IA L ++ +L++ Sbjct: 159 AAERALDAAHARAADARAAQLELQANVVRTYIGMSLDYALLDIARATLQQQQQIADLANR 218 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G ++L + + + E I LE+ + + ++ L G +Q+ Sbjct: 219 RLKGGIGTQLEASQAQTPLPEYERQIDALEERIALGRNQLAALAGK-GPGAGDSIQR--- 274 Query: 254 NFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL----SL 305 P L + G+P A+LI +RPDI +A I +AK+ YP + S+ Sbjct: 275 ---PKLSLAAPAGLPSALPAELIGHRPDIVAARWTVAAQARGIDVAKAGFYPDIDLLASI 331 Query: 306 NGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 G A+ F +H WS GP L LPIFD G+++S + A + E + ++++ Sbjct: 332 GGYAAMGPLFQFLKNPSHSWSAGPALSLPIFDGGRLRSELGAASAGYDEAVENYNQSIVG 391 Query: 365 AIKEVENALTSINEDKKIVTKLQHA---VELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 A+K+V + + I + + T+ Q A V +K+ L+ YR+G L++L + Sbjct: 392 ALKDVSDQVIRI---RSLTTQAQDAERSVAAARKNYELAREGYRRGLTDYLNVLTAQNQL 448 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++ + ++ L A+G G + Sbjct: 449 LRAQEGVAKVHAERLGAHASLVTALGGGLD 478 >gi|153837037|ref|ZP_01989704.1| outer membrane efflux family protein [Vibrio parahaemolyticus AQ3810] gi|149749625|gb|EDM60370.1| outer membrane efflux family protein [Vibrio parahaemolyticus AQ3810] Length = 458 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 97/453 (21%), Positives = 209/453 (46%), Gaps = 26/453 (5%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + + + +++D WW +FND +LN+ + Sbjct: 11 ALSAVWLSGCGSLMRSDYQAPEVQV-PANWQQMHVADDVSMD--PWWLAFNDPTLNQYIT 67 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S R +L + + L Sbjct: 68 QVLAQNNDLTLATLTLKKARLQLGLAQDDLFPTLSSSTSGRVQKSLDSGESADSYSTNLS 127 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++++DL+G+ ++ ++ + ++++ Y + K+R++++ + Sbjct: 128 VNYELDLWGKISADVDQVKWTAMASQQDREATAQSLVATTASLYWQIGYLKQRLNLSQRN 187 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ + ++L ++ GA +L +++ + + S+++ E+S + + L P Sbjct: 188 VEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQP 247 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 +Q P+L ++G P+DL+ RPDI+ ++ ++A A D Sbjct: 248 PKSISANIQMLPEGDMPSL----SVGTPSDLLIRRPDIKAAIYEVKAALANKDAADLDYL 303 Query: 301 PSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 304 PKLTLTGALGGSSKALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQSA 358 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 359 IVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMDY 418 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ + T + L + + V LY ++G Sbjct: 419 LNAQEETRNAQASLLENRYNQFLTQVTLYQSLG 451 >gi|315636720|ref|ZP_07891950.1| outer membrane efflux protein OprM [Arcobacter butzleri JV22] gi|315479035|gb|EFU69738.1| outer membrane efflux protein OprM [Arcobacter butzleri JV22] Length = 462 Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 115/431 (26%), Positives = 208/431 (48%), Gaps = 44/431 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESF--NDTSLNKLVKIA 68 I + +GC++ PE + + ++PT+ KN N++ ++ WE+F ND L +L+KIA Sbjct: 11 IFIFSGCSLKPE-IEYNDSVIPTELKNSLDKN-SNLEYIQPNWENFVKND-KLKELIKIA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS--------TGQL 120 L+ N + A I +A+ +A FPS A S+ ++ +NS + + Sbjct: 68 LENNRDLKIAILNIESARATYRVEKAKYFPSIDAKASNTNARDVTSNSNTEISRTYSAKF 127 Query: 121 DSDWKIDLFGQRRHIESSL--ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + +++DLFG+ R + S + L + YA K+++IS++I ++ E + I Sbjct: 128 GASYELDLFGKTRSLNDSALESYLATKYAATS-TKISLISEIINTWNTLSSNIEHLKILE 186 Query: 179 QILDLYKKNIELSHLKFTQGA-------TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + K + +L+ KF G +SK SL + E + + ++ +EK+ M Sbjct: 187 DSIANLKLSTQLTQKKFDMGIILIDDVLSSKTSLKEAEVTLLNYKT---VVEKNKNMLEL 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 +ST + P + N+ + I GI + ++ +RPDI E L A Sbjct: 244 LVSTTI--PENLLPTSFKDTENSL-----MLIQAGISSKVLYSRPDIIQAEYNLKAKNAN 296 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYN-THWSFGPKLYLPIFDKGKIKSNIRRA 347 IG A++ +PS++L L ++ F G N T WSF P + LPIF G+ +N+ A Sbjct: 297 IGAARAAFFPSITLTADYGLASNSLSSLFNGNNQTVWSFIPSINLPIFKGGENIANLDYA 356 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + + +++T+ A K+V +AL +INE + + V KKS +S+ +Y Sbjct: 357 NAQQKIALAQYEKTIQTAFKDVSDALVERANINEQ---LNAQEDLVNTAKKSYEVSLNSY 413 Query: 405 RQGRYSLLDIL 415 + G + L++L Sbjct: 414 KYGIGNYLNVL 424 >gi|326800224|ref|YP_004318043.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] gi|326550988|gb|ADZ79373.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobacterium sp. 21] Length = 471 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 110/476 (23%), Positives = 215/476 (45%), Gaps = 65/476 (13%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 C + + P+ P F S + +I + W + FND +L L+ A+ N+ Sbjct: 19 ACKTTDKAIQTEAPV-PANFRNAEVLSDDSTSIAFIPWRDFFNDVTLQTLIDTAIAHNMD 77 Query: 75 ILQATERINAAKENILSVRADLFPS---------------SYASIS-HRFIPNLKTNS-- 116 + A + I+AA+ + +A P+ S +S ++F LKTN Sbjct: 78 LQLAIKNIDAAQATLKQAKAGYIPNVNLQVGANSTNPSNNSLNGVSLNQF---LKTNHIE 134 Query: 117 --TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK----LNVISKLIPSYIDARHF 170 L W+ D++G+ I++ A ++Y Q + AK ++S + Y + Sbjct: 135 DYNATLALSWEADIWGK---IKNQKAEALASYLQTEEAKKAVQTQIVSYVAQGYYNLLML 191 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E++ IA Q L L + + ++ G + L L + EA+ + S IP E+ + Sbjct: 192 QEQLKIARQNLALNDSTLNIIKQQYDVGEITLLGLEQAEAQRLAAASLIPDFEQQINIQE 251 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADS 288 + +S L G + + QS ++ IP IN G+P+ L+ RPD++ E + + Sbjct: 252 NALSILSG----KLPEGIATQST--LDDIRIPEKINTGVPSLLLSRRPDVKQAELAVMAA 305 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-------THWSFGPKLYLPIFDKGKIK 341 A A++ +YPSL+++ + NSF N + + PI + ++K Sbjct: 306 RANQRYARASMYPSLTISAQAGV---NSFKASNWFNIPASVFGTVAGGIAQPILQRRQLK 362 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVT-----KLQHAVELHK 394 +N A + ++ I ++++V+ A+ EV +AL ++N ++K+ + KLQ A+ Sbjct: 363 TNYELAAINHEKSVIQFRQSVITAVGEVSDALIALNKLQEKQSIALNRTNKLQSAIHNAD 422 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + M NY L+++ + + E++L+ K+ + V+LY ++G G+ Sbjct: 423 LLFNTGMANY-------LEVITAQSNVLQSELELAQIKKAQLVAMVELYRSLGGGW 471 >gi|186472360|ref|YP_001859702.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184194692|gb|ACC72656.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 490 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/426 (22%), Positives = 191/426 (44%), Gaps = 40/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 WW+S+ D L+ LV+ A Q+N + A ER+ AA+ R+ L P+ Sbjct: 50 WWDSYGDPVLSDLVRRAAQENRDVRIAAERVRAARAGETISRSWLLPTLSVGAMGFNHTT 109 Query: 100 SYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIE-----SSLANLDSAYAQVDIA 152 +Y ++ F+P GQ + + W++D+FG+ R ++A ++A Sbjct: 110 NYDTVLKNFVPEAANTRAGQVGIGASWEVDVFGRLRAGAAAAAADTIAVQNTARG----V 165 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L V++ + +Y ++ I + + L + G + + +++ E Sbjct: 166 RLLVLTDVATNYFTLVGALRQLETVRAISAAQDETLRLVTARERVGLATPFDVERVKTEA 225 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + IP LE ++ H+I+ L+G A+ P P G PA L+ Sbjct: 226 SRTHAAIPPLETLAAVSRHHIAVLVGDQASNAASITPSGVGAIVP----PARPGQPATLL 281 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY- 331 + RPD+ +L + A+ A ++ +P L L G++ G + GP + Sbjct: 282 QRRPDLLVASAQLDAANARRQQAMAEWFPRLFL-GAVFGRESIDLNGI----ALGPARFS 336 Query: 332 -------LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 +PIF+ G+ ++ AE +E + +++ ++ A+++VENAL +++++++ Sbjct: 337 NVAGLIAMPIFNAGRTQAINDIAEIGQKEAVLHYEDAIVRALEDVENALVALDDERQRAQ 396 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L++A + ++ + Y +G+ LL +LD +R V + + QL V LY Sbjct: 397 LLENAATTAEAALGRAQSLYNRGQTDLLPLLDAQRTRLAVRAIANDSSTQLLLDSVQLYK 456 Query: 445 AIGSGY 450 A+G G+ Sbjct: 457 ALGGGW 462 >gi|146302037|ref|YP_001196628.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146156455|gb|ABQ07309.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 472 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 102/469 (21%), Positives = 210/469 (44%), Gaps = 34/469 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVK 66 F++ I L C V + P P F + S + +I ++W F + + KL+ Sbjct: 11 FAILITTLISCKVSKDIETPK-DAFPENFRNASVSSDTTSIADVEWKNFFTEKDIIKLID 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTN---S 116 A+ +N + A + I A+ + P +S ++ S L N Sbjct: 70 SAVARNNDLQIAEKNIEIAQYRFTQSKWGNVPQVNLFVNASTSNPSDNSFTGLNLNQAIG 129 Query: 117 TGQLDS-------DWKIDLFGQRRHIESSLANLDSAYAQVDIAK----LNVISKLIPSYI 165 +D W+ D++G+ R+ + + Y Q + K N+++ + Y Sbjct: 130 AKHIDDYSAGASLSWEADIWGKIRNQKKGAY---AGYLQSEEVKKALQTNIVANVSRGYY 186 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++ IA Q L L + LK+ G + L++ + EA+ + IP LE++ Sbjct: 187 NLLMLDAQLDIARQNLRLNDSTTNIIKLKYDAGQVTTLAIQQSEAQKLNSAQLIPLLEQN 246 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + +S L G F + ++ + + IG+P+ L+ RPD++ E L Sbjct: 247 IAIQENALSVLTG----SFPNSKERSTQLSAIEVKHNTAIGVPSALVSRRPDVKSAELAL 302 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGP---KLYLPIFDKGKIK 341 + A +GI K+DLYP+L + + + +N S FG L P+ + +++ Sbjct: 303 KAANANVGITKADLYPALRITAQGGVNSFETSNWFNIPASLFGTVAGGLTQPLLNNKRVR 362 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A + ++ ++++++VL A+ EV +AL + + ++ T L+ V+ ++++ + Sbjct: 363 TQYNIAVAEREKAVLSFRQSVLVAVSEVSDALVKVEKLQQQETFLKEKVKTLQQAIKNAN 422 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + ++ G L++L + + E++L+ KRQ + DLY A+G G+ Sbjct: 423 LLFKNGMAEYLEVLTAQANLLQSELELADIKRQQLTANTDLYRALGGGW 471 >gi|94313204|ref|YP_586413.1| NodT family outer membrane lipoprotein [Cupriavidus metallidurans CH34] gi|93357056|gb|ABF11144.1| RND efflux system, outer membrane lipoprotein, NodT, putative fusaric acid resistance protein [Cupriavidus metallidurans CH34] Length = 483 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/429 (20%), Positives = 196/429 (45%), Gaps = 38/429 (8%) Query: 50 LKWWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHR 107 L WW+ D +L+ LV ++ N + I A ++ + I + S+ + Sbjct: 60 LAWWKRMGDPNLDALVTQSVGGNPDMRIALARGQLAESAARIAGAATEPGISTGGAFGRT 119 Query: 108 FIPNLKT----------NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNV 156 P L T N+ +D + +DL+G+ R I +++L + + A+ ++N+ Sbjct: 120 RFPRLATPQPIGGHTTWNNHVSVDLAYDLDLWGRNRAILQAALDGVQATAAEARTVQINL 179 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNI-------ELSHLKFTQGATSKLSLVKLE 209 + ++ +Y+D +++ + +LD+ + N+ ++ H + ++G S+L + + + Sbjct: 180 ETSVVRAYVD-------LALQYALLDVNQANLVRQRNIYDIVHKRASRGLASELEVSQAQ 232 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 +I ++ + + E+ + + I+ L G ++ + P + + +PA Sbjct: 233 TQIPALLAQVQQSERQVALAKNQIAILSGQGPGAGERLLRPRLLLETP---VAVPSSLPA 289 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS---- 325 +L+ +RPD+ Q ++ + I AK+D YP++ L SI L +F + T S Sbjct: 290 ELVGHRPDVVAQRWRVEAAAHGIKAAKADFYPNIDLVASIGLAS-AAFGNFFTFVSRDAV 348 Query: 326 ---FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 G + LP+FD G+ + N A +S T+ +TVL A + V + + S+ Sbjct: 349 GHNVGAAISLPLFDGGRRQGNYGVATASYDLAVETYNKTVLAAFQSVADEVISLRSLGDQ 408 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 ++ +++ +++ L+ YR G L++L E + + L++ + ++ L Sbjct: 409 QQDIEASLKSAQRAYELAEKGYRGGFTDYLNVLATESELRRQQQALALVQAARLDTWARL 468 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 469 MQALGGGFD 477 >gi|317504460|ref|ZP_07962438.1| outer membrane efflux family protein [Prevotella salivae DSM 15606] gi|315664403|gb|EFV04092.1| outer membrane efflux family protein [Prevotella salivae DSM 15606] Length = 474 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 106/461 (22%), Positives = 207/461 (44%), Gaps = 68/461 (14%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LPTQ+ N L T W+ F D L L+ AL N + ++I AK ++ Sbjct: 36 LPTQY---NGDTLTAKTTPTSWKMFFTDPQLKALIDSALVNNQDLKITLQQIAVAKSGMI 92 Query: 91 SVRADLFPS-----------------------SYASISHRFIPNLKTNSTGQLDSDWKID 127 + + + PS S + IP+ N DW++D Sbjct: 93 AAKGAMLPSLSVGAEVGVSKAGRYTSEGAGNASTEMTPGKLIPDPLMNYHPGFAFDWELD 152 Query: 128 LFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG+ + +E LA L+ A + ++IS++ +Y ++++ + +D Sbjct: 153 LFGKLKSSKKAAVERYLATLEGQNA----VRASLISQVASNYYTLLALDNKLALIRKYID 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L ++ +++ ++ + ++L++ K +AE+ S L++ + ++ LLG YP Sbjct: 209 LQRQAEKIAEIQKEADSDTELAVEKFKAELAKARSQEFALKQEITECENALNLLLGRYPT 268 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +Q+ + I G+P++L+ +RPDIR E +LA + I A+ P Sbjct: 269 P-----IQRDAKQLLNEDVKTIVTGLPSNLLSHRPDIRQAEHELAAAHWDIETARKAFLP 323 Query: 302 SLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S++++ ++ L N P Y T +S L P+ ++ I++N ++A+++ + Sbjct: 324 SVNISATLGLEAFN--PTYLTRMPKSLAYSVVGGLTAPLINRKAIEANFQQADAAQLQAL 381 Query: 356 ITWQETVLNAIKEVENALT---------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +T+L A EV L+ ++ E++ V L+H+VE+ + Y Sbjct: 382 YEYDKTLLTAYSEVCTLLSKHKNLAAYYALKEEE--VKTLEHSVEVSHQL-------YMN 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 GR + LD+L+ ER +++L ++Q VDLY ++G Sbjct: 433 GRATYLDVLEAERDALDAQMELLETRQQQLSCVVDLYRSLG 473 >gi|237747530|ref|ZP_04578010.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378892|gb|EEO28983.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 454 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/420 (22%), Positives = 192/420 (45%), Gaps = 26/420 (6%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L +++AGC T P M ++P Q + K ID+ +WW++++D +LNKLV +A Sbjct: 7 TLLCLIIAGCATQTT-TIPDMGVIPQQTIVAGYK----IDS-EWWKTYHDENLNKLVAVA 60 Query: 69 LQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFIPNLKT-----NSTGQLD 121 L+ N+ + ++ +N A + N+L +L P S+ N+K N T +L Sbjct: 61 LENNIDLKKSAITVNKALYEANLLG--QNLVPEFSGSLGASVSNNMKAGQTSHNYTSELG 118 Query: 122 SDWKIDLFGQRRHIESSLANLDSAY----AQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++IDL+ R + S+ + + Y ++ +L +I+ ++ SY + + I + Sbjct: 119 VSYEIDLW---RKLSSAASAQEWEYKATQQDMETTRLALINNIVDSYFHLVYLNQAIRVT 175 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + Y + +++ + KFT G L + E + + + + TLE + + + LL Sbjct: 176 EENIGFYTQLLQIINNKFTSGKVDALEPLTAEKSLLASRNSLMTLENNRKTVEQTLRNLL 235 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 + L ++ P + +N+ I A + RPD++ E ++ + K+ Sbjct: 236 NLRPGDKLD-IKTADILMTPATNVDLNVPISA--LGLRPDVKAAEYRIQSAFLDWESVKA 292 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +YPS+++ +++ + S +N + G + LP KIK NI+ +E+ + + Sbjct: 293 SVYPSVTIGSTLSTASNKSSSMFNVPFLGGTVNINLPFLQWNKIKWNIKISEADFENARL 352 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +V A+ EV+ S + ++ L + K + + Y G L D LD Sbjct: 353 NLTSSVNTALNEVDTYYYSYEKSVSLLDNLSRRYDNDAKISVYNRMRYEAGATELKDWLD 412 >gi|152978811|ref|YP_001344440.1| RND efflux system outer membrane lipoprotein [Actinobacillus succinogenes 130Z] gi|150840534|gb|ABR74505.1| RND efflux system, outer membrane lipoprotein, NodT family [Actinobacillus succinogenes 130Z] Length = 467 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 35/444 (7%) Query: 32 LPTQFS-IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LP F GN D +WW ++D L +L++ L+ NL I A R+N A+ N Sbjct: 32 LPANFEQTGNGTG--TADVSRWWRQWHDPQLTRLIEQGLRNNLDIAMARSRLNEAQANTA 89 Query: 91 SVRADLFP--SSYASISHRFIPNLKTNSTGQLDS------------DWKIDLFGQRR-HI 135 AD P S I + + TG+ D+ W++D FG++R Sbjct: 90 YTEADKGPQVSGSGRIGGSRSRLINSPLTGENDTSSGNNQYAGITASWELDFFGKKRSDA 149 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 +++ A + Q+ ++ + ++ +Y + +++ ++ +Q + + + +F Sbjct: 150 DAAKAAETAVQNQIYATRMLIAGQIAENYFNIFALQQQNAVLNQSVKVLSRLRNYVQGRF 209 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G + ++++E + ++++ TL N I+ L G F + + N Sbjct: 210 NAGQANANDVLQVENRLTAVQAQQATLNSQIAANERAIAVLTGQTPQGF-----RINKNG 264 Query: 256 QPNLYIPINIG--IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-----GS 308 P + +P +P DL+ RPD+R ++ + AK+ AK+DLYP + G Sbjct: 265 NPLVTLPSPPAGMLPGDLLNRRPDLRVDRAQIQAAAAKLASAKADLYPRFDIQFMGGTGR 324 Query: 309 IALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 I + D + G+ S G L +PIF G+I++NI A++ + + + +T++ A+ Sbjct: 325 IEINSDISELKGWTGLLSGG--LSVPIFTNGRIQANIDAADARLKTALLQYDKTLIQALA 382 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA-KVEV 426 +V+NA + + Q AV+ + S + + ++ G +L + L ER A + Sbjct: 383 DVDNAYQAQYALNRQAELQQSAVKKAQVSAANAEKLFKYGDKNLDNAL-TERLNALDYQN 441 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGY 450 L + AK+ V+LY A+G G+ Sbjct: 442 QLIQVRLNRAKNLVNLYKALGGGW 465 >gi|281424590|ref|ZP_06255503.1| outer membrane efflux family protein [Prevotella oris F0302] gi|281401261|gb|EFB32092.1| outer membrane efflux family protein [Prevotella oris F0302] Length = 474 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 105/461 (22%), Positives = 208/461 (45%), Gaps = 68/461 (14%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LPTQ+ N L T W+ F D L L+ AL N + ++I +K ++ Sbjct: 36 LPTQY---NGDTLTAKTTPTSWKMFFTDPQLKALIDSALVNNQDLKITLQQIAVSKSGMI 92 Query: 91 SVRADLFPS-----------------------SYASISHRFIPNLKTNSTGQLDSDWKID 127 + + + PS S + IP+ N DW++D Sbjct: 93 AAKGAMLPSLSVGAEVGVSKAGRYTSEGAGNASTEMTPGKLIPDPLMNYHPGFAFDWELD 152 Query: 128 LFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG+ + +E LA L+ A + ++IS++ +Y ++++ + +D Sbjct: 153 LFGKLKSSKKAAVERYLATLEGQNA----VRASLISQVASNYYTLLALDNKLALIRKYID 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L ++ +++ ++ + ++L++ K +AE+ S L++ + ++ LLG YP Sbjct: 209 LQRQAEKIAEIQKEADSDTELAVEKFKAELAKARSQEFALKQEITECENALNLLLGRYPT 268 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +Q+ + I G+P++L+ +RPDIR E +LA + I A+ P Sbjct: 269 P-----IQRDAKQLLNEDVKTIVTGLPSNLLSHRPDIRQAEHELAAAHWDIETARKAFLP 323 Query: 302 SLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S++++ ++ L N P Y T +S L P+ ++ I++N ++A+++ + Sbjct: 324 SVNISATLGLEAFN--PTYLTRMPKSLAYSVVGGLTAPLINRKAIEANFQQADAAQLQAL 381 Query: 356 ITWQETVLNAIKEVENALT---------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +T+L A EV L+ ++ E++ V L+H+VE+ ++ Y Sbjct: 382 YEYDKTLLTAYSEVCTLLSKNKNLAAYYALKEEE--VKTLEHSVEVSRQL-------YMN 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 GR + LD+L+ ER +++L ++Q VDLY ++G Sbjct: 433 GRATYLDVLEAERDALDAQMELLETRQQQLSCVVDLYRSLG 473 >gi|170698037|ref|ZP_02889119.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170137099|gb|EDT05345.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 488 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 106/464 (22%), Positives = 194/464 (41%), Gaps = 73/464 (15%) Query: 18 CTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESFNDT 59 C + P T P MP + QF +G + +WW F Sbjct: 21 CAMAPSSTPPAMPSPAHYGETPQPARTAEAAGVAQQFDVGAAP------VPQWWRLFRSG 74 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENIL--SVRADLFPS--SYASISHRFIPNLKTN 115 +L+ LV L N T L ATE+ AA + L V A PS + A ++ P++ Sbjct: 75 ALDALVDEGLSANPT-LTATEKTLAAAQQELRAQVGASTLPSLDANAQVARTRTPDISGT 133 Query: 116 ST---------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQL + + DLFG R+ +S A +D +++ A+ + + ++ + I Sbjct: 134 GAQTLRYNVFVGQLQAHYTFDLFGATRYANAASAARVDVRACELEAARRALAANIVGTAI 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 A +I + +++ + + ++ GA S + S+ + +P L + Sbjct: 194 SAAALDRQILLTERLVTIAASSAHDDAQRYALGAISHAQALASTQNAASLAATLPALRQQ 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQP-----NLYIP--INIGIPADLIRNRPDI 278 VH ++ LLG + + P NL +P + + +P+DL++ RPDI Sbjct: 254 RATTVHALAILLG-----------RTPDAVPPIPAFGNLSLPEHVPVVVPSDLLKARPDI 302 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPI 334 R E + + A G A + L+PSLSL ++ S+P G W+ G L P+ Sbjct: 303 RAAEAAVKAAAADAGEATAQLFPSLSLTATLG-RGGFSWPALLSGAGGLWAVGAGLSQPL 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE--- 391 F G + ++ R S + ++ VL+A +V ++L +++ D + + + AV Sbjct: 362 FHGGALLAHRRATFDSYDAAVLQYKSAVLSAFGDVADSLAALDNDAQTLAANEIAVRAAG 421 Query: 392 ------LHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVD 427 + ++++ ++ +Q R L LD RA ++ D Sbjct: 422 AAFDETVQRRTLGAVPVSAQQASERQYLTAELDAVRAASRRMTD 465 >gi|134291787|ref|YP_001115556.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134134976|gb|ABO59301.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 513 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 25/418 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 WW F D LN L N T+ +A + A+ + A P+ S A + Sbjct: 70 WWTVFGDADLNALEARVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTITAGAAQSRARV 129 Query: 105 SH-RFIPNLKTNST----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 S R +L +T + + W+ D+FG+ R + + A+ ++ A + KL+V + Sbjct: 130 SQNRLGSSLAGKTTPDYQAGVAASWEPDVFGRVRDAVAGAQADAAASAADLQAVKLSVTA 189 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +L Y R + + + Y + L + GA ++ + + ++++ + Sbjct: 190 ELATDYFALRSLDTQKQLLDDTVREYADALTLLQQQLAAGAIDASAVAQADTQLEATRTQ 249 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 ++ + H I+TL+G A+ F P I G+P+ L+ RPDI Sbjct: 250 DTDIDAARAQLQHAIATLVGESASTF-----ALPPRMTPFAVPAIPAGVPSQLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHWSFGPKLYLPIF 335 E+++A + A+IG A++ +P L L+ S L P + WS GP+L +F Sbjct: 305 AAAERRVAAANAQIGEARAAFFPDLVLSASAGLESSFFAPWLTAPSLFWSIGPQLAGTLF 364 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ +++R A + +++TVL ++VE+ L++I Q A + Sbjct: 365 DGGRRSASLRGAHAQYDGAVAGYRQTVLVEFQQVEDQLSTIATLASEARSQQRATDAADL 424 Query: 396 SMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S+ L+ + G S LD++ + T + D A+R A+ V L A+G G+ Sbjct: 425 SLRLTTNRFNAGAVSYLDVVTAQTIALTNRRTADQIDARRMEAE--VGLLKALGGGWQ 480 >gi|323526760|ref|YP_004228913.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323383762|gb|ADX55853.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 510 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/465 (20%), Positives = 196/465 (42%), Gaps = 35/465 (7%) Query: 15 LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFNDTSLNKLVK 66 +AGC + P+ + P G++ + D WW ++ D L+ ++ Sbjct: 21 IAGCASTGGIAPQTNRTD----PASLDAGSAIRAADADAGWPAADWWRAYRDPQLDAWIE 76 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL----------- 112 A N ++ A R+ A R+ L P +S ++ NL Sbjct: 77 AAQANNPSLAAAQARVREAMSMAGVARSALAPQVNGELSIKRQQWADNLYYGPGPLAGEQ 136 Query: 113 KTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+TG L + +DL+G+ R+ E +L + A A+L + + ++ +YI Sbjct: 137 SWNNTGTLALSYHLDLWGKDRNAAERALDAAHARAADARAAQLELQANVVRTYIQMSLDY 196 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + IA L ++ +L+ + G ++L + + + + E +I LE+ + + Sbjct: 197 ALLDIARATLQQQQQIADLASRRLKGGIGTQLEVSQAQTPLPEYEREIDALEEKIALGRN 256 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G +Q+ + +P +PA+LI +RPD+ +A Sbjct: 257 QLAALAGK-GPGAGDAIQRPVLSLAAPAGLPS--ALPAELIGHRPDVVAARWTVAAQARG 313 Query: 292 IGIAKSDLYPSL----SLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 I +AK+ YP + S+ G A+ F +H WS GP L LPI D G+++S + Sbjct: 314 IDVAKAGFYPDIDLLASIGGYAAMGPLFQFLKNPSHSWSAGPALSLPILDGGRLRSELGA 373 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + E + +T++ A+K++ + + I + + +K+ LS YR+ Sbjct: 374 ASAGYDEAVEHYNQTIVGALKDISDQVIRIRSLDTQAEDARRSEAAARKNYELSREGYRR 433 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G +++L + + + ++ + + ++ L A+G G + Sbjct: 434 GLTDYVNVLIAQNQLLRAQEGVAKVQAERLGAHASLVTALGGGLD 478 >gi|300776991|ref|ZP_07086849.1| outer membrane efflux family protein [Chryseobacterium gleum ATCC 35910] gi|300502501|gb|EFK33641.1| outer membrane efflux family protein [Chryseobacterium gleum ATCC 35910] Length = 489 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 105/480 (21%), Positives = 213/480 (44%), Gaps = 46/480 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKN-LINIDTLKWWESFNDTSLNKL 64 A ++F++ L C + +P ++ G+++N IN +KW E F+D L +L Sbjct: 10 AGLAVFLLSLTACKPIEIEQRAENKTVPEKY--GSAENDTINTGKMKWNEYFSDPHLQEL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASIS------ 105 + ALQ N + + I +K I + + + PS Y +I Sbjct: 68 ITQALQNNQELNIVLQEIEMSKNEIKAKKGEYLPSVGLKAGAGVDKVSRYTNIGAMEANT 127 Query: 106 ----HRFIPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNV 156 R +P + + W+ D++G+ + ++ LA+++ + N+ Sbjct: 128 EIEPGREMPEPLFDFGVGAQAQWETDIWGKLHNATKAQVQRYLASIEGK----NFMTTNL 183 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 IS++ SY + + I +Q + + +E+ +++L++ + EA++ + Sbjct: 184 ISEIADSYYELLALDNELVILNQNIKIQNDALEIIKDLKKNARSNELAVQRFEAQVLKTQ 243 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +++ + I+ L+G F +++ N+F + + G+P++L+ NRP Sbjct: 244 GMQYDIQQKIVETENKINYLVG----RFPQPVERSQNSFDSIVPQAVYGGMPSELLENRP 299 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTHWSFGPKLY 331 DI+ E +LA + I AK+ YPSL L+ I L N P Y + +S +L Sbjct: 300 DIKQAEYELAAAKLDIKAAKARFYPSLDLSAGIGLQAFN--PLYIIKPQSFLFSLAGELT 357 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+ ++ IK+ A + + +++T+L A EV N L+ I+ + V V Sbjct: 358 APLINRRAIKAAYYNANARQIQAVYHYEQTILGAYIEVANQLSKIHNLESSVNIKSKEVN 417 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 KS+ +S ++ R +++L +R + + +L K K+ V +Y A+G G++ Sbjct: 418 ALTKSIDISNDLFKYARADYMEVLLTQRDALESKFELVEKKVNQLKASVAVYRALGGGWD 477 >gi|104783526|ref|YP_610024.1| fusaric acid resistance protein [Pseudomonas entomophila L48] gi|95112513|emb|CAK17240.1| putative fusaric acid resistance protein [Pseudomonas entomophila L48] Length = 508 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/463 (19%), Positives = 192/463 (41%), Gaps = 27/463 (5%) Query: 11 FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 + L+GC + P+ L T +I + + +WW ++ D L+ V Sbjct: 17 LCLTLSGCIGTWGIAPQSKTLQANQLTTDDAIREAARDAHWPAQQWWRAYGDPQLDAWVA 76 Query: 67 IALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS-- 122 AL + ++ A R+ AK ++ L + A++ P + G L Sbjct: 77 QALAGSPSLAMAAARVREAKAMAGVVESAEKLQANGNATLKRHNWPEDQFYGPGALSGAN 136 Query: 123 ----------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + +DL+G+ R+ E ++ + A+ A+L + + ++ +YI Sbjct: 137 TWDNNAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELENNVVRAYIQLSLHY 196 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 R I L ++ + L+ + G + + + EA + I +L + + + Sbjct: 197 ARRDIVQAELAQQEQIVALAKRRLDGGIGTHFEVSQAEAPLPETHRQIDSLNEEIALTRN 256 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G E +Q+ + L +P N+ PA+L+ RPD+ ++A Sbjct: 257 QLAALAGKGPGEGAK-LQRPTLTLGAPLALPSNL--PAELVGQRPDVVASRWQVAAQARG 313 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 I +A + +P++ L GS+ P G +++ GP + LPIFD G+++S + Sbjct: 314 IDVAHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPIFDGGRLRSQLGV 373 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + +TV+ A+K + + L K+ +V +K+ ++ + +++ Sbjct: 374 ASAGYDVAVARYNQTVIGALKNISDQLIRRESMKEQAHFAAESVAAAQKTYDIATVAFQR 433 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L++L+ + + + + ++ +L A+G G Sbjct: 434 GLTDYLNVLNAQTLLFRQQQVQQQVQAARLTAHAELVTALGGG 476 >gi|319940841|ref|ZP_08015180.1| hypothetical protein HMPREF9464_00399 [Sutterella wadsworthensis 3_1_45B] gi|319805723|gb|EFW02504.1| hypothetical protein HMPREF9464_00399 [Sutterella wadsworthensis 3_1_45B] Length = 474 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 106/456 (23%), Positives = 195/456 (42%), Gaps = 30/456 (6%) Query: 12 IVLLAGCTV-GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKW---WESFNDTSLNKLVKI 67 I+ GC V P+Y++ P Q++ + L W W + D L +L+ Sbjct: 15 ILTSTGCAVQSPDYSRLLSDAAPQQWT---ASTLPAGHIAAWQDFWARWEDPVLVELITK 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIPNLKTNS-TGQLDSDW 124 AL N I A + AA ++ S A L+P++ + S NS + ++ Sbjct: 72 ALAANPDIETAAANLRAANASVTSANAALWPTASLGLNGSRNHADGTGRNSFSAEVSGGL 131 Query: 125 KIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 ++L G + ++L + SAY D+ + + +Y++ R + +++ L+ Sbjct: 132 SLNLAGSEFWQADAATLKAMASAYTLEDV-RAATAAATAEAYVNLRAAEASLAVTKASLE 190 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 Y + E + +F G S ++ S + IPTL K+ + + L G P Sbjct: 191 TYLETAETAQWQFQAGTGSASEAEDALMQVASSRAQIPTLGKNIIQYRNALMRLTGCPVD 250 Query: 243 EFLHYMQKQSNNFQPNLYIPI-----NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 E +P IP+ + +PA+LI RPD+R + +V + AKS Sbjct: 251 EL---------GLEPTGIIPVPPMGGAVSMPAELIEQRPDVRAAKATAEAAVKNLKSAKS 301 Query: 298 DLYPSLSLNGSIALTHD--NSFPGYNTHWSFGPKLY-LPIFDKGKIKSNIRRAESSAQEQ 354 D +P+LSL+G+I T ++ T + +PI + G + + A ++ Q Sbjct: 302 DFFPTLSLSGNIGTTATAVSALGASGTGVAGLAAALAMPILNWGNLIAGEETATANLQSA 361 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++ T+L+A++E +NALT+I + L+ AV + + L+ Y G + Sbjct: 362 VASYRSTLLSALEETDNALTAIRSAEYRKGDLERAVSHARTAEKLARDEYGAGIGEYTML 421 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +R+ + A SY+ LY A+G + Sbjct: 422 LSTQRSLLSARESELNNRADRANSYITLYRALGGDW 457 >gi|170769905|ref|ZP_02904358.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia albertii TW07627] gi|170121199|gb|EDS90130.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia albertii TW07627] Length = 488 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/473 (20%), Positives = 203/473 (42%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + N +L + +WW+ FND L+ L+K L Sbjct: 19 TLMSGCALIRKDSAPHQQLKPEQIKLANDIHLASSGWPQAQWWKQFNDPQLDALIKRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSSVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I ++E I ++ Sbjct: 195 YSIQASDQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVEKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + L G A++ M + + P + I +P DL+ RPD++ Sbjct: 255 QITETREALRALTGAGASD----MPEIKSTALPQVQTGIPATLPYDLLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L D F + +F P L LP+FD G++ Sbjct: 311 VQASLNQVDAARALFYPSFDIKAFFGLDSIHLDTLFKNTSRQINFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++NE++++ + A +++ Sbjct: 371 ANLEGTRATSNMMIERYNQSVLNAVRDVAVNGTRLQTLNEEREMQAERVEATRFTQRAAD 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + + E+ L + + + L ++G GY Sbjct: 431 AA---YKRGLTSRLQATEAQLPVLSEEMALLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|317490898|ref|ZP_07949334.1| NodT family efflux transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920445|gb|EFV41768.1| NodT family efflux transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 485 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 109/479 (22%), Positives = 213/479 (44%), Gaps = 39/479 (8%) Query: 4 LRAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLKWWESFNDTS 60 +R F+ ++LLAGC +P L+ +Q + S N ++ WW + ND Sbjct: 5 IRGQFTALTAVLLLAGC-ASTNNIEPQSSLINSQQLQLSTSTNTAKAVSINWWTAANDAQ 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF--------I 109 LN L+ AL+ T+ QA R+ A+ + + P+ + +S RF Sbjct: 64 LNALMADALKNAPTLKQAAARVREAENAVGMANSANGPNLDLTASSRRDRFSKNTIQPLA 123 Query: 110 PNL--------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 PN+ TN+ G L+ ++ D +G+ R + ++ A +++A A+ L++ S + Sbjct: 124 PNMPNPQPLYETTNNLG-LNFSYEFDWWGKYRNQVNAAKAQVNAAQAEQQQTALSLTSAI 182 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + + ++ + Y+ E++ ++ G + +A++ + Sbjct: 183 ASAYYQLQSNYAMQELLNKQIQSYQALAEINQQQYNAGVVGIEVWQQSQAQVDINRQMVT 242 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ + H I+ L G A +Q+ S L P + I +L+ RPDI Sbjct: 243 QIQTQIDLLSHQIAALTGKSAAG-KSAIQRVSLPDSQWLTPPTELTI--NLLGQRPDITA 299 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN--------THWSFGPKLYL 332 Q + + + A+ D YPS+S++G T N F G N W+ P + L Sbjct: 300 QRELVESYEQSVQAARKDFYPSVSISGFAGFTTAN-FKGTNPTLLEAASKAWNLAPAISL 358 Query: 333 PIFDKGKIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF G ++S + ES+ +Q + ++ +T+LNA+++ +A+T ++ + Q A + Sbjct: 359 PIFHAGALQSKLGE-ESALYDQAVESYNQTILNAVQDAADAITQQQSASQMYQQAQGASQ 417 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ ++ Y+ G L +L+ E + + AK L +S + L ++G GY Sbjct: 418 STEQVYRVAQAQYQSGLTGRLPMLNSETQLLQQQQAELNAKNNLLQSKIGLIRSLGGGY 476 >gi|284037830|ref|YP_003387760.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] gi|283817123|gb|ADB38961.1| RND efflux system, outer membrane lipoprotein, NodT family [Spirosoma linguale DSM 74] Length = 476 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/476 (19%), Positives = 204/476 (42%), Gaps = 47/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + + + C T+ +P ++ G ++ +N + W E F D L+ L+ A Sbjct: 13 TCMTLAITSCKTPALVTRTENRNVPVTYNTG--QDTLNTGKVNWREFFTDPHLSALIDTA 70 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP------------------------SSYASI 104 L N + + + I A+ I + + P S+ Sbjct: 71 LGNNQELNISLQEIQVAQNEIRARTGEYLPFVGLQAGAGIDKVGRYTRSGAIEESTEIRP 130 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPS 163 H F PN + ++ W++D++ + + + + A S+ + N+++++ S Sbjct: 131 GHNF-PNPLPDFLLSANASWQVDIWNKLHNAKRAAAIRYLSSIEGKNFTVTNLVAEIANS 189 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + ++ I + +D+ + + L+ ++L++ + EA++ +S ++ Sbjct: 190 YYELLGLDSQLDIVKRNIDIQTNALSIVRLEKESAKVTELAVRRFEAQVLRTQSLQFDIQ 249 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++I+ L+G F +Q+ + +F + ++ GIP L++NRPDIR E+ Sbjct: 250 QRITETENHINFLVG----RFPQPVQRSTQDFNTRIPEVMHAGIPTQLLQNRPDIRRAER 305 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL---------PI 334 +L + + +A+++ PSL L+ ++ F Y P+ +L P+ Sbjct: 306 ELEAAKLDVQVARANFLPSLDLSAAVG------FNSYKPTLLLTPESFLYSLIGGFTRPL 359 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 ++ IK+ A + + ++ T+LNA EV N + +IN ++ V+ Sbjct: 360 INRNSIKAMYYSANAKQIQAVYNYERTILNAYIEVANQIANINNLQRSYDLKARQVDALI 419 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S ++S ++ R +++L +R + DL K Q + V+ Y A+G G+ Sbjct: 420 QSTNISNTLFKSARADYMEVLLTQRDALESRFDLVETKVQQLNAMVNTYRALGGGW 475 >gi|237708202|ref|ZP_04538683.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265756857|ref|ZP_06090845.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229457755|gb|EEO63476.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263233643|gb|EEZ19263.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 457 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/424 (23%), Positives = 192/424 (45%), Gaps = 35/424 (8%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 NI L W E F D L +L++ L+ N + A R+ A+ +LS + PS +A Sbjct: 47 NIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQWRVKEAEAAMLSAKLAYLPS-FALSP 105 Query: 106 HRFIPNLKTNSTGQ-----LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 + Q + + W+ID+FG+ R+ + + A L+ + + +I+ Sbjct: 106 QGTASSFDKGKAAQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRTQLIAG 165 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y ++ I+ + +K+ ++ + G ++ ++ ++EA +I + + Sbjct: 166 IANTYYTLLMLDNQLVISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSV 225 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS---NNFQPNLYIPINIGIPADLIRNRP 276 L++ +++S LL P H +++ +++ + P+ GIP ++ NRP Sbjct: 226 LDLKEQINQVENSLSLLLAEPP----HAIKRTGTWDSSYMLKEHFPV--GIPVQMLANRP 279 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYL 332 D+R E+ L + A+S YPS+ L+GS T+ PG + L Sbjct: 280 DVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGSMIVNPGKFIATAVA-SLTQ 338 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDK-----KIVTK 385 P+F+KG + ++ A++ +E +++Q+ +LNA EV AL DK K + Sbjct: 339 PLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSAYYDKQINS 398 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L A+E S SL M + G + L++L ++ E+ + + ++LY A Sbjct: 399 LNKALE----STSLLM---QHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQA 451 Query: 446 IGSG 449 +G G Sbjct: 452 LGGG 455 >gi|60682815|ref|YP_212959.1| putative transport related, lipoprotein [Bacteroides fragilis NCTC 9343] gi|60494249|emb|CAH09042.1| putative transport related, lipoprotein [Bacteroides fragilis NCTC 9343] Length = 475 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 27/427 (6%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 I S N L W E F D L L+ AL +N + A R+ A+ +LS R Sbjct: 51 IQRSDTAANFGNLSWQEVFTDPYLRVLIDSALVRNTDLRTAHLRVKEAEATLLSARLSYL 110 Query: 98 PS---SYASISHRFIPNLKTNSTG-QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQV 149 P+ S + F T + + + W+ID+FG+ +R ++ +A Y Q Sbjct: 111 PAFSLSPQGTASSFDGGKATQTYSLPVSASWEIDIFGRLTNAKRRAQAVVAQ-SRDYEQA 169 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + +I+ + +Y +I I+ +K+++ + G ++ +L + E Sbjct: 170 --VQTQLIAAVANNYFTLLMLDAQIEISTATEAAWKESVATTRAMKAAGMVTEAALSQTE 227 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A +I + + L++ + +S LL + H + + Q L +++G+P Sbjct: 228 ATYYNICTTLLDLQEQLNQAENALSLLLA----DVPHRIPRGRLADQ-QLPENLSVGVPL 282 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWS 325 ++ NRPD+R E+ LA + A+S YPS++L+GS T+ PG + Sbjct: 283 QILSNRPDVRSAEQSLAQAFYTTNAARSAFYPSITLSGSAGWTNSAGAMIVNPGKFLATA 342 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIV 383 L P+F++G + +R A++ +E +++++T+LNA EV NAL DK Sbjct: 343 VA-SLTQPLFNRGANIAQLRIAKAQQEEARLSFEQTLLNAGSEVNNALVQYQTARDKSAY 401 Query: 384 TKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 Q A +E +S L M + G + L++L ++ ++ + + + L Sbjct: 402 FNRQVASLENAARSTQLLM---KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITL 458 Query: 443 YIAIGSG 449 Y A+G G Sbjct: 459 YQALGGG 465 >gi|170733097|ref|YP_001765044.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169816339|gb|ACA90922.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 522 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 186/422 (44%), Gaps = 55/422 (13%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTL------------ 50 +A+ +L + LAG G + P P +P+ G + + + Sbjct: 10 KAVRALTVASLAGPLAGCAWFAPSGEPPAMPSPAHYGAAPQVQQTVSAHGVAQQFEVGAQ 69 Query: 51 ---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---S 103 WW+ + +LN LV L+ + T+ A+ ++AA+E + + + + PS A + Sbjct: 70 PVPDWWKQYRSDALNALVDEGLRNSPTLSAASHSLDAAREQLRGQIGSSMLPSIDAGGQA 129 Query: 104 ISHRF----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIA 152 R IP L + GQL + + +DLFG R +LA +D + Q++ A Sbjct: 130 TRQRALGVPIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESA 189 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + + ++ + I +I +++ L + + G+ S+ + Sbjct: 190 RRALAANIVTASITVAVLNAQIDTTERLVSLANDQAHDAERRHALGSASRSDALNARQSA 249 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INI 265 + + +P L + H ++ L+G PA L +L++P + + Sbjct: 250 DTFAASLPALRQQRDSARHALAVLVGRTPDRPPADLVLT-----------DLHLPEQVPV 298 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYN 321 +P+DL+++RPDI+ + L + A++G+A + ++P LSL+ ++ S+P G Sbjct: 299 VVPSDLLQSRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMG-KGGFSWPAMLSGAG 357 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 W+ G L PIF G + + R A+++ + +++ VL A + V ++L ++ D + Sbjct: 358 AIWNVGASLSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAE 417 Query: 382 IV 383 + Sbjct: 418 AL 419 >gi|52840510|ref|YP_094309.1| outer membrane channel protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627621|gb|AAU26362.1| outer membrane channel protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 448 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 109/464 (23%), Positives = 210/464 (45%), Gaps = 43/464 (9%) Query: 5 RAIFSLFIVLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 R + L +L GC +G EY KPH+ P ++SI ++ + L WW+ FN Sbjct: 5 RWLILLCALLNNGCLWLGSEYRKPHVNTPQKWPHKYSI-QTEQAAYLPDLHWWKQFNSKE 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN ++ ALQ N I A I +A+ + V+ P+ + P L T + Sbjct: 64 LNASIQKALQNNHQIHLAMANIESAQGQLQQVQLSWLPNLTGLAGYTQFPVLGNPGTTAI 123 Query: 121 D-SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + I++F Q + +S+ A L+ S YAQ A+L VI++ S+ E + + + Sbjct: 124 AYPAYIINIFQQYKQQKSAQAMLEASIYAQYS-ARLVVIAQTAASFFTLIAQNEALHLYN 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L Y+ ++L+ ++ G S ++ ++++ I+ IE+ I ++ HNI Sbjct: 183 KLLKDYRTYLKLTQSQYRSGLISLDNITQIKSRIQRIEAQIKVVQ-------HNIVV--- 232 Query: 239 YPATEFLHYMQKQS----------NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 LH++ ++ N N +P N +PA ++ RPDI E L + Sbjct: 233 --TKNALHFLFNENPGDVEIKTLFENIDSNQLVPGN--LPASVLSVRPDIHEAEALLKAA 288 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---YNTHWSFGPKLYLPIFDKGKIKSNIR 345 A +G ++L P ++L L ++ G + GP + LP+F + + Sbjct: 289 HADVGAITANLLPGINLGAY--LGEGSNVDGAIKLGQAYLNGPIIDLPLF------AQVD 340 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 +++ + YI + T+ A+++V N L++ + + + A+ K+ L+ + YR Sbjct: 341 VSKARYKAIYIKYITTIRKALRDVANDLSAYSTSSQQLNNNLSALSDEKQQCHLAEVRYR 400 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L+++ + + ++ ++ K + S V LY +G G Sbjct: 401 HGIDDYLNLIKCQILLDEFKLVINQNKLEKLLSIVTLYQDLGGG 444 >gi|329118230|ref|ZP_08246940.1| outer membrane multidrug resistance lipoprotein [Neisseria bacilliformis ATCC BAA-1200] gi|327465651|gb|EGF11926.1| outer membrane multidrug resistance lipoprotein [Neisseria bacilliformis ATCC BAA-1200] Length = 476 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 107/491 (21%), Positives = 202/491 (41%), Gaps = 72/491 (14%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F L L +GC P++T + T ++G + +WW + ND L+ L+ Sbjct: 7 LFFLCAALFSGCATHPKHTPAAVE---TAETLGLPASPQPPIAPQWWRALNDAKLDGLID 63 Query: 67 IALQQ------------------NLTILQATERINAAKENIL----SVRADLFPSSYASI 104 AL + +L Q +I L V P + + Sbjct: 64 TALARSPDLAAAQARLRQAQAGVDLADSQRGVKIGLGLSGALLHRDGVNEREKPELISDL 123 Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 R + + TN T QL W D+FG+ +H +E++L + ++ +L ++++ Sbjct: 124 EKRLLGDHGTNITYESLQLQGQWSPDVFGKYKHQLEAALGQQRAVEYEIAQTRL-LLAQG 182 Query: 161 IPSYIDARHF----KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV-----KLEAE 211 + +Y ++R++ Q L+ ++ + ++ Q A SKL V + +A Sbjct: 183 VATYYRQWQLLLETRQRVAQRAQ-LNREREQVVRELIRAGQLAPSKLYAVQQGNSRFQAA 241 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN----LYIPINIGI 267 + ++ +I + H ++ L G PA + F PN P + Sbjct: 242 LSDLDGNIAQVR-------HVLAALTGQPAQAL--------DTFAPNPAATTPAPPVSQL 286 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPG 319 ADL+ RPD+ Q + L + AK++ YP++++ L+ H +SF Sbjct: 287 TADLLGKRPDLAAQREALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFLA 346 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 P + LPIF G +++N+ R E+ EQ + + V A++E +ALT Sbjct: 347 -----GLLPSVSLPIFTSGTLRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYETA 401 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 V L +++ + + +R G + LD L + T + E L+ A+ +L ++ Sbjct: 402 AAAVRDQTEMTALARRNTAAAQSRFRAGLDNKLDFLTAQDETLQNEAQLAQAQAKLFTAW 461 Query: 440 VDLYIAIGSGY 450 + L A G G+ Sbjct: 462 LALNTAFGGGF 472 >gi|288929877|ref|ZP_06423719.1| outer membrane efflux family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288328696|gb|EFC67285.1| outer membrane efflux family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 474 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 106/461 (22%), Positives = 206/461 (44%), Gaps = 68/461 (14%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LPTQ+ N L T W+ F D L L+ AL N + ++I AK ++ Sbjct: 36 LPTQY---NGDTLTAKTTPTSWKMFFTDPQLKALIDSALVNNQDLKITLQQIAVAKSGMI 92 Query: 91 SVRADLFPS-----------------------SYASISHRFIPNLKTNSTGQLDSDWKID 127 + + + PS S + IP+ N DW++D Sbjct: 93 AAKGAMLPSLSVGAEVGVSKAGRYTSEGAGNASTEMTPGKLIPDPLMNYHPGFAFDWELD 152 Query: 128 LFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG+ + +E LA L+ A + ++IS++ +Y ++++ + +D Sbjct: 153 LFGKLKSSKKAAVERYLATLEGQNA----VRASLISQVASNYYTLLALDNKLALIRKYID 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L ++ +++ ++ + ++L++ K +AE+ S L++ + ++ LLG YP Sbjct: 209 LQRQAEKIAEIQKEADSDTELAVEKFKAELAKARSQEFALKQEITECENALNLLLGRYPT 268 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +Q+ I G+P++L+ +RPDIR E +LA + I A+ P Sbjct: 269 P-----IQRDPKQLLNEEVKTIVTGLPSNLLSHRPDIRQAEHELAAAHWDIETARKAFLP 323 Query: 302 SLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S++++ ++ L N P Y T +S L P+ ++ I++N ++A+++ + Sbjct: 324 SVNISATLGLEAFN--PTYLTRMPKSLAYSVVGGLTAPLINRKAIEANFQQADAAQLQAL 381 Query: 356 ITWQETVLNAIKEVENALT---------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + +T+L A EV L+ ++ E++ V L+H+VE+ ++ Y Sbjct: 382 YEYDKTLLTAYSEVCTLLSKNKNLAAYYALKEEE--VKTLEHSVEVSRQL-------YMN 432 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 GR + LD+L ER +++L ++Q VDLY ++G Sbjct: 433 GRATYLDVLGAERDALDAQMELLETRQQQLSCVVDLYRSLG 473 >gi|32476820|ref|NP_869814.1| outer membrane protein [Rhodopirellula baltica SH 1] gi|32447366|emb|CAD77192.1| probable outer membrane protein [Rhodopirellula baltica SH 1] Length = 494 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 112/454 (24%), Positives = 205/454 (45%), Gaps = 26/454 (5%) Query: 10 LFIVLLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L +LL G P+ T P FS +I D +WW SFND +LN + +A Sbjct: 32 LIAMLLVGVGCANPDSTWTFRTQTPPPFS--TPGEVIPPD--RWWTSFNDPTLNAEIDVA 87 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS-TGQLDSDWK 125 LQ N T+ A +R+ AA+ +DL+P + A P +S LD+ ++ Sbjct: 88 LQGNFTLAAALQRLYAARAVTRREASDLWPDLNGVADYGSTMGPGRDRSSFIWGLDAGYQ 147 Query: 126 IDLFGQRRHIESSL--ANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +DL+G+ IES + L ++ + D L + +++ ++ +I + ++ L Sbjct: 148 VDLWGE---IESRVDAERLRTSATREDYHAIALTLTAEIARTWFSLIEGHAQIKLLNEQL 204 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 D + + L +F G +++ +++ I + + H ++ LLG Sbjct: 205 DNNEMGLALQEARFASGLIRSPDVLRQRQLVEATLEQIVVEKVRIEVLEHQLAVLLG--- 261 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR--YQEKKLADSVAKIGIAKSDL 299 E + + P L + G+P++L++ RPD+R Y + AD + A S Sbjct: 262 -EMPQAAEYDPGSILPPLPPLPSTGLPSELLQRRPDVRRDYLAFRAADR--DLASAISAQ 318 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 YP ++L GS+ L S W S G ++ P+FD G+ ++ + R + +E + Sbjct: 319 YPRINLTGSL-LNVSESPETLFRDWFVSIGAQMIAPLFDGGQRRAEVDRNAAVKRELFNV 377 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + +T+LNA EVE+AL + + L++ VEL ++S Y + LD+L Sbjct: 378 YGQTMLNAFSEVEDALAQERYQLERIEHLENQVELARQSSEQLREQYLISDATYLDVLSA 437 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 A +++ + A+ L V LY+A+ ++ Sbjct: 438 ITAQQRLQRETLSAQLDLVLIRVSLYLALAGDFD 471 >gi|254495765|ref|ZP_05108678.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254355010|gb|EET13632.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 475 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 112/478 (23%), Positives = 212/478 (44%), Gaps = 59/478 (12%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFS-------IGNSKNLINIDTLKWWESFNDTSLNKL--- 64 L GC++ P Y +P MP+ P F + + +++ D WW++FND LN L Sbjct: 5 LMGCSLAPTYQRPPMPI-PEHFKETGTWLKVKDKPHIVQPDA--WWQAFNDPILNDLEDK 61 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHRFIPNLKTNSTGQLDS 122 + +A Q+L + A + A + R+ FP+ A + + + N LD Sbjct: 62 LTVA-NQDLKVAYAHYQDAYALAQV--ARSYFFPTLQALFNADRQQTSHTVANPQKVLDY 118 Query: 123 D---------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + +++D +G R +S ++ A V L++ ++L Y R E Sbjct: 119 NQILVGGYLSYELDAWGAIRNQFVASDRLAKASAADVATIHLSLHAELANDYFALRGSDE 178 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV-- 230 + I + YKK + L+ ++ GA + + E ++++ + T+ + R+ Sbjct: 179 QQRILDTTVVAYKKALYLTKKRYQGGAAPIADVDEAETQLENAK----TMAEDMRLKRAQ 234 Query: 231 --HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H I+ L+G + F K P ++ I +P+ L++ RPDI E ++ + Sbjct: 235 LEHAIAVLVGELPSAFSLAPAKL-----PQRFLAIAPNMPSTLLQRRPDIIAAELRVQAA 289 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGP----KLYLPI-----F 335 A IG+A++ +P +L G+ SF + WS GP L PI F Sbjct: 290 NASIGVARAAFFPQFNLTGTGGY-QSQSFANLISKPSLFWSLGPLSLLTLIQPIAAVTIF 348 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+++S + +A++ T+++TVL A ++VE+ L +I + K + A + Sbjct: 349 DGGRLRSLLNQAKADYYATVATYRQTVLTAFQDVEDNLIAIKQLDKERSTQDAATRAAMR 408 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSI-AKRQLAKSYVDLYIAIGSGYN 451 + Y G + L ++ +E + E +++ +RQ+A V L A+G G++ Sbjct: 409 AWKQEQYRYAGGLVTFLQVVVVENTALQSEFASVNVRTRRQMAS--VQLIKALGGGWS 464 >gi|255022211|ref|ZP_05294211.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus caldus ATCC 51756] gi|145208523|gb|ABP38229.1| NodT [Acidithiobacillus caldus ATCC 51756] gi|254968358|gb|EET25920.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus caldus ATCC 51756] Length = 442 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 60/436 (13%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS-------IGNSKNLINIDTL--KWWESF 56 A +L L GC VGP P +P P +++ IG + L D +WW +F Sbjct: 21 AASALIGAALTGCAVGPHLPPPTIPQ-PARYTQKALPQKIGGQQRLRWSDQAYARWWTTF 79 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 L+++V LQ N + + AK + + + L PS A++ L+T + Sbjct: 80 ASPGLDRIVDQVLQHNPDLAADRASLARAKALVAAAQGGLMPSIGANLGADRSKALRTGA 139 Query: 117 TGQLDSDWKI------------------DLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 G S +K+ D+FG Q + ++ A + AQ+ A++ VI Sbjct: 140 DG--GSQYKVPGNLYSLILGTVSVQYNPDVFGGQEDLVHAAKARTEVQSAQLRQAQIFVI 197 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + + ID + ++ A I ++ + L ++ G + ++ + +A + ++ Sbjct: 198 AATMNAAIDGAQAQAQLQAAQHIARADERLLTLLRAEYKLGYQNLQNVEQQQAITDAAQA 257 Query: 218 DIPTLEKSFRMNVHNISTLLG--------YPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + LE S H + LLG PA + LH Q I + +P+ Sbjct: 258 RLAPLEASVSAARHALDALLGSMPNRPVNLPALKRLHLPQN------------IPVVVPS 305 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN---THWSF 326 L++ RPDI ++ + A +A ++LYP L + GSI +N T WS Sbjct: 306 ALLKTRPDIEAARAEVRVASANADVATANLYPQLDITGSIGKAAQTGMLFFNPVSTLWSL 365 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN------EDK 380 G L PI++ G + + + A + E ++ TV +A ++ +AL ++ + Sbjct: 366 GASLVAPIYEGGALTAERQAAMDAYHEAANRYRATVFDAFRQNADALRALQSAHTACKHS 425 Query: 381 KIVTKLQHAVELHKKS 396 K +LQ + EL +S Sbjct: 426 KASARLQQSAELAVRS 441 >gi|224024518|ref|ZP_03642884.1| hypothetical protein BACCOPRO_01243 [Bacteroides coprophilus DSM 18228] gi|224017740|gb|EEF75752.1| hypothetical protein BACCOPRO_01243 [Bacteroides coprophilus DSM 18228] Length = 481 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 104/479 (21%), Positives = 211/479 (44%), Gaps = 48/479 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I ++ + ++ GC P T LP ++ + + + TL W F D L + Sbjct: 13 IAAMGLSVMGGCKA-PSLTPDEAVRLPEMYT--EDTDTVTVATLSWKAFFPDDYLKAYID 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF-------IPNLKTNS 116 AL +N + LQA E+++ A+ + + L P A RF + N TN+ Sbjct: 70 TALLRNPSFLQAVEQVSIARAQLRVGKGALLPEVSLGLAGGIQRFGEYTMDGVGNSTTNT 129 Query: 117 TG----------------QLDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVIS 158 L+ W+ D++G+ R ++ + S AQ ++A+ +IS Sbjct: 130 PDLAKDKHIPDPYKDLNLGLNFSWEADIWGKLTDRKRAAAARWMKSVEAQ-ELARTMMIS 188 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y + ++ S+ ++ +++ L++ +G S+LS+ + + +E Sbjct: 189 EVALQYYNLVGLDKKRSVLKGAINKTRESYLLTNELMKEGEVSRLSVDQFRSRRLKLEEM 248 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + E+ ++ LLG E ++ + + P ++GIPA L+RNRPD+ Sbjct: 249 LLDTEQQIAEAERAMALLLGKLPFEIRRSTFEEVSEYS----FPADVGIPAQLLRNRPDV 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLP 333 R E +L S + + A+ +PSL + G + +L S P + ++ + P Sbjct: 305 RAAEFELLASKSDVSAARKAFFPSLVIGGGGGFNAFSLEKWFSSPA-SLVYNLAAGITAP 363 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +F + +++S + A+S + + + +T L A +EV N +T+ + + + +H Sbjct: 364 VFRRNELRSLWQEAKSRQRIALLGYHDTALRAYQEVVNLMTASEQMNQRKALKKEESRIH 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSG 449 +S+ + ++ G LD+L + E ++L+IA QL + LY ++G G Sbjct: 424 HRSIYNANELFKTGFAGYLDVLSADERYLDCELERIELNIAYCQL---HAMLYRSLGGG 479 >gi|53714829|ref|YP_100821.1| multidrug efflux pump channel protein [Bacteroides fragilis YCH46] gi|253565933|ref|ZP_04843387.1| multidrug efflux pump channel protein [Bacteroides sp. 3_2_5] gi|265766631|ref|ZP_06094460.1| multidrug efflux pump channel protein [Bacteroides sp. 2_1_16] gi|52217694|dbj|BAD50287.1| multidrug efflux pump channel protein [Bacteroides fragilis YCH46] gi|251945037|gb|EES85475.1| multidrug efflux pump channel protein [Bacteroides sp. 3_2_5] gi|263253008|gb|EEZ24484.1| multidrug efflux pump channel protein [Bacteroides sp. 2_1_16] gi|301164284|emb|CBW23842.1| putative transport related, lipoprotein [Bacteroides fragilis 638R] Length = 475 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 27/427 (6%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 I S N L W E F D L L+ AL +N + A R+ A+ +LS R Sbjct: 51 IQRSDTAANFGNLSWREVFTDPYLRVLIDSALVRNTDLRTAHLRVKEAEATLLSARLSYL 110 Query: 98 PS---SYASISHRFIPNLKTNSTG-QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQV 149 P+ S + F T + + + W+ID+FG+ +R ++ +A Y Q Sbjct: 111 PAFSLSPQGTASSFDGGKATQTYSLPVSASWEIDIFGRLTNAKRRAQAVVAQ-SRDYEQA 169 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + +I+ + +Y +I I+ +K+++ + G ++ +L + E Sbjct: 170 --VQTQLIAAVANNYFTLLMLDAQIEISTATEAAWKESVATTRAMKAAGMVTEAALSQTE 227 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A +I + + L++ + +S LL + H + + Q L +++G+P Sbjct: 228 ATYYNICTTLLDLQEQLNQAENALSLLLA----DVPHRIPRGRLADQ-QLPENLSVGVPL 282 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWS 325 ++ NRPD+R E+ LA + A+S YPS++L+GS T+ PG + Sbjct: 283 QILSNRPDVRSAEQSLAQAFYTTNAARSAFYPSITLSGSAGWTNSAGAMIVNPGKFLATA 342 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIV 383 L P+F++G + +R A++ +E +++++T+LNA EV NAL DK Sbjct: 343 VA-SLTQPLFNRGANIAQLRIAKAQQEEARLSFEQTLLNAGSEVNNALVQYQTARDKSAY 401 Query: 384 TKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 Q A +E +S L M + G + L++L ++ ++ + + + L Sbjct: 402 FNRQVASLENAARSTQLLM---KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITL 458 Query: 443 YIAIGSG 449 Y A+G G Sbjct: 459 YQALGGG 465 >gi|325102898|ref|YP_004272552.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter saltans DSM 12145] gi|324971746|gb|ADY50730.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter saltans DSM 12145] Length = 475 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 106/476 (22%), Positives = 215/476 (45%), Gaps = 58/476 (12%) Query: 15 LAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 + GC V P+ T+ + + LP + ++ ++ LKW + F D L +L+ A++ N Sbjct: 17 IVGCKV-PKLTEQNANIALPKTYD--TLQDSLSSANLKWQQFFTDPYLVRLIDTAIRNNQ 73 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS----------- 122 + + I A+ + +FPS + + S G D+ Sbjct: 74 ELQITLQEIEIARNEARIKNSQIFPSVGVKVGVGLEKVGRYTSQGAGDASTDMTEGKPVP 133 Query: 123 ------------DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDA 167 +W++D++ ++ H ++ A L A ++ N+I+++ +Y + Sbjct: 134 DPLADFGIMANANWEVDIW-KKLH-DAKKAALSRYLATIEGRNFVLTNLIAEVANTYYEL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDI--PTL 222 ++ I + + + + + + G T++L++ K AE+ S+E DI + Sbjct: 192 LALDSQLGIVRENVKIQTDALRVVKAQKDAGRTNELAVKKFNAEVLKTSSMEFDIRQQIV 251 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 E R+N+ LLG YP T +++ +F + + GIP+ L+ NRPDI+ Sbjct: 252 ETENRLNL-----LLGRYPKT-----IERNRADFTGLSPLAVKNGIPSQLLANRPDIQQA 301 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY------NTHWSFGPKLYLPI 334 E++L + + +A+++ YPSL ++ + L +F P Y + ++ L PI Sbjct: 302 EQELKAAKLDVKVARAEFYPSLGISAGLGL---QAFKPSYLFTLPESMLYAIAGDLATPI 358 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 ++G IK+ A + + ++ TVLNA EV N L+SI+ +K V + Sbjct: 359 INRGAIKAEFANANARQIQALYNYERTVLNAYLEVANRLSSISNLEKAYDLKSQQVNVLS 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +S+ +S +R ++L +R + +++L K+ + V++Y A+G G+ Sbjct: 419 QSIEISNDLFRSAHADYFEVLMTQRDALEAKLELIETKKNQLMATVNVYKALGGGW 474 >gi|170694414|ref|ZP_02885567.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170140548|gb|EDT08723.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 518 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 186/422 (44%), Gaps = 24/422 (5%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 +L+W F D L KL+ AL+ N +I QA R+ A I S R+ L+P SY+ Sbjct: 62 SLEWANQFGDPQLPKLIDEALEGNPSIAQAQARLAKASSYIESSRSALYPKVNGSYSWTR 121 Query: 106 HRFIPNL----------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F N + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELFSGNALYPPPYGGTWYSENNVLASASWDLDLWGKNRQRLGQAVSQEKAAQADMQQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + ++ ++ +++ + G + + I + Sbjct: 182 TLAASVASTYNQLAQLYALRDIAAREIENRQEIGRITNGRVAAGLDTNVERQTATGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK--QSNNFQPNLYIPINIGIPADLI 272 +S++ L+ + + + LLG L Q + N + +P N+ PADL+ Sbjct: 242 SQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAQPVLGAGN---AVTLPDNL--PADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPK 329 R DI ++ ++ + AK++ +P ++L + A + FGP Sbjct: 297 ARRADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAAFGFDAFGWGRFLKAGSRQIQFGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 ++LPIFD G ++S ++ + + +T++NA+ +V ++SI + Q A Sbjct: 357 VHLPIFDAGALRSQLKGRYADFDLDVANYNQTLINALSDVATQVSSIRSIDQQSGDAQRA 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ K+ L++I Y+ G L +L ++ E ++ K + + L A+G G Sbjct: 417 LDASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAAEQTVTTLKMRRRDLQIGLVKALGGG 476 Query: 450 YN 451 ++ Sbjct: 477 FD 478 >gi|157370103|ref|YP_001478092.1| RND efflux system outer membrane lipoprotein [Serratia proteamaculans 568] gi|157321867|gb|ABV40964.1| RND efflux system, outer membrane lipoprotein, NodT family [Serratia proteamaculans 568] Length = 454 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 108/463 (23%), Positives = 210/463 (45%), Gaps = 27/463 (5%) Query: 1 MNILRAIFSLFIVLLA-GC--TVGPEYTKPHMPLLPTQFS-IGNSKNLINIDTLKWWESF 56 M IL + LL+ GC + EY P + PTQ+ ++ + W F Sbjct: 1 MKILSPLMLCLAALLSTGCGNALKSEYQSPKVDY-PTQWQPSADAATSVPFA----WHDF 55 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL--FPSSYASISHRFIPNLKT 114 +D L + ++ + N + A R+ A+ +++ R D+ PS A+++ L Sbjct: 56 HDPQLERWLQQVMLANNDLAAAALRVYRAQ--LMAQRVDIGTAPSVNATLNTGASTALSN 113 Query: 115 ------NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYID 166 NS+ L +++DL+G+ + A S Q D+ A+L +++ +Y Sbjct: 114 SSPWNKNSSASLGVSYEVDLWGKLAR-QRDAAEWASQATQQDLQSARLALLANASKNYWR 172 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +RI ++ Q + ++ +EL + ++ G+ S L +V E + + ES L + Sbjct: 173 LGFINQRIGVSQQNIAYSRQTLELVNARYRAGSISSLDVVDAEQNLINQESSHLALLRER 232 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ + LLG P + L + P IN GIP +++R+RPDI +E +L Sbjct: 233 QQALNEQTVLLGSPPGKALVEPARLPTGPLPQ----INAGIPVNVLRHRPDISAKELRLR 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIR 345 +++A + + ++ YP+ SL GS+ + N S G L LP + ++ +I+ Sbjct: 289 EALANVDVKRTQYYPAFSLTGSLGASSTALLEFLRNPLASVGAGLSLPFLEWRQMDVDIK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A S + Q + +++ + A+ +V +AL+ ++ L+ ++ L +KS L+ YR Sbjct: 349 IARSDYELQVLEFKQALYKAMADVADALSLRSQLIAQEKHLRASLALAQKSERLNESRYR 408 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 QG + LD + E+ L + ++ LY+ G Sbjct: 409 QGAVPISFWLDAQNRRRLAELALDENRFGQYQNLAQLYLEFGG 451 >gi|319900451|ref|YP_004160179.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides helcogenes P 36-108] gi|319415482|gb|ADV42593.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides helcogenes P 36-108] Length = 464 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 103/424 (24%), Positives = 191/424 (45%), Gaps = 35/424 (8%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSY 101 N L W + F D L L++ AL N + AT + A+ ++S R P S Sbjct: 52 NFGNLPWRKVFTDPQLQTLIEQALANNADLRNATLNVKQAQAALMSARLAYAPMLGLSPQ 111 Query: 102 ASISHRFIPNLKTNSTG-QLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNV 156 ++S + N T + + + W+IDLFGQ +R+ + SL V + V Sbjct: 112 GTVSS-WDKNKATQTYSLPVTASWQIDLFGQLLNPKRNAQVSLKQTRFHEQAV---QTQV 167 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSLVKLEAEIKS 214 I+ + Y ++ I +D+ K+N+E G T+ +++ + Sbjct: 168 IANVANMYYTLLMLDRQLQITEGTVDILKRNMETVKAMKDAGIYGTTSVAVEQSRTAYAQ 227 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLI 272 +++ +P + +S R + + +L PA Q S + +P ++GIP L+ Sbjct: 228 VKASLPDIRQSIRETENALCLILNKPA-------QSISRSVLEAQQLPKEFSVGIPLQLL 280 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGP 328 NRPD++ E LA A++ YP ++L+GS T+ PG + G Sbjct: 281 SNRPDVKAAEMALASKYYNTNSARAAFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG- 339 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+F +G + +++A++ ++ I +Q ++L A EV NAL+ + + T Sbjct: 340 SLTQPLFYRGTNIARLKQAKAQEEQAKIQFQTSLLKAGNEVSNALSKYQMETEKATARTI 399 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKV-EVDLSIAKRQLAKSYVDLYIA 445 V +K+ + ++ G + L++L E++ +A++ EV + A Q + V+LY A Sbjct: 400 QVNSARKAAEDTKELFKLGTSTYLEVLSAEQSYLSAQLSEVSDTFAGIQ---AVVNLYQA 456 Query: 446 IGSG 449 +G G Sbjct: 457 LGGG 460 >gi|167836816|ref|ZP_02463699.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 478 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/427 (20%), Positives = 185/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--- 105 +L W F D L KL+ AL+ N TI QA R+ A I S R+ L P + A S Sbjct: 58 SLDWASQFGDPQLPKLIDEALEGNPTIAQAQARLAKASSYIESSRSTLLPKADAQYSWTR 117 Query: 106 -----HRFIP-----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 + +P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSGNALVPPPFGGQWYSENNALASASWELDLWGKNRARLHAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAEHEISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSPGGAVALPDSLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVNALNDVATQVASIRSVDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|325279289|ref|YP_004251831.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] gi|324311098|gb|ADY31651.1| RND efflux system, outer membrane lipoprotein, NodT family [Odoribacter splanchnicus DSM 20712] Length = 462 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 107/478 (22%), Positives = 220/478 (46%), Gaps = 47/478 (9%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHM---PLLPTQFSIGNS--KNLINIDTLKWWE 54 M I I+ L + LL C + Y++P + L S+ ++ + +N+ L W + Sbjct: 1 MKIQTIIYPLCMAALLGSCHIYKPYSRPEVDTQGLYRDPVSVNDTLVSDTVNMANLPWEK 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIP 110 F D L L+++ L++N + A ++ A+ ++++ R PS +S Sbjct: 61 VFTDPQLQVLIRLGLERNTDLQTAMLQVKEAQASLMTSRLSYLPSLTLAPQGGVSS--FD 118 Query: 111 NLKTNSTGQL--DSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +K + + L + W++DLFG+ +R +++L AY Q + V++ + Y Sbjct: 119 RMKGSWSWSLPVSASWELDLFGKILNTKRAAKAALLR-SEAYRQA--VQTQVVAAIANYY 175 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 +++ I + L+ +N+E ++ +V+ EA + + I L+ Sbjct: 176 YTLLMLDKQLQITEETAVLWGENVETMKAMKEAAMVNEAGVVQSEANYYMVLASISDLKN 235 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQE 282 R + +S LL QK + +P ++ G+P L+ NRPD++ E Sbjct: 236 QIRETENALSLLL-------RQAPQKIERGKLEDQQLPTILHTGVPVQLLSNRPDVKAAE 288 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSF--PGYNTHWSFGPKLYLPIFDKG 338 LA + A++ YPS+S++G+ T+ N+ PG + G L P+F +G Sbjct: 289 MALAGTYYNANEARAAFYPSISISGTYGWTNQAGNTIINPGKMIASAIG-SLTQPLFYRG 347 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT--SINEDKKI-----VTKLQHAVE 391 + ++ A++ E +++++ +LNA +V +AL+ EDK+I + L+ +VE Sbjct: 348 ANIARLKIAKAQQAEAMLSFEQAILNAGADVSDALSLYQSAEDKRIQRVKQINSLEKSVE 407 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ ++L N + L++L +++ ++ + Q ++ V+LY A+G G Sbjct: 408 YTQELLTLGTSN-----TNYLEVLTAQQSLLNAQLSGISDEFQRLQAVVNLYHALGGG 460 >gi|299141226|ref|ZP_07034363.1| multidrug resistance protein, FusA/NodT family [Prevotella oris C735] gi|298577186|gb|EFI49055.1| multidrug resistance protein, FusA/NodT family [Prevotella oris C735] Length = 466 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 117/475 (24%), Positives = 207/475 (43%), Gaps = 41/475 (8%) Query: 2 NILRAIFSLFI--VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKN-LINIDT-----LKW 52 NI + IF + I V L GC ++ +Y +P + + + K+ L+ DT + W Sbjct: 4 NINKTIFLMAIAAVTLTGCKSLYGKYERPEINTSGVFRDVVSDKDTLVATDTATFANIPW 63 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 F DT L +L++ L N +L A + A+ + + + PS +A I + Sbjct: 64 RSVFTDTQLQRLIEQGLAHNPNLLNAALNVQMAEAQLKAAKLSFLPS-FAFTPQGTISSW 122 Query: 113 KTNSTGQLDS-----DWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N ++ S W +DLFG +R + +L L S QV + + +I+ + Sbjct: 123 DGNKANKVYSLPVTASWNVDLFGTLLSSKRAAQVAL--LQSKDYQVSV-QTKLIANIANM 179 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHL-KFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y +++ + + L K ++ L K ++ + EA S+ + + Sbjct: 180 YYTLLMLDKQMELVTDMEKLTKDTWDIMVLQKDAIVGVRSTAVQRAEANYYSVLTQKVDI 239 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRY 280 ++ R + +S L+G A Q S + +PIN G+ L++NR D+ Sbjct: 240 KRQIRETENALSLLIGQQA-------QSISRGKLEDQMLPINFSTGVGLQLLQNRADVHA 292 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFD 336 E LA + A+S YP L++N S A T+ PG + G L PIF Sbjct: 293 AEMALAQCFYNVETARSRFYPVLNINASGAFTNSGGMGIVNPGKWLLTAVGS-LTQPIFQ 351 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHK 394 KGK+ + ++ A++ ++ + TWQ VL A EV NAL N E+K V Q +E+ K Sbjct: 352 KGKLVAGLKVAKAQYEQAFNTWQNAVLTAGSEVSNALVQYNSAEEKSKVEAKQ--IEVLK 409 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K++ + + L+++ + + E+ ++ V+LY A+G G Sbjct: 410 KNVDDTKELMASAGSTYLEVITAQSSLLNAELSKVADDFSKMQAVVNLYSALGGG 464 >gi|170722699|ref|YP_001750387.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169760702|gb|ACA74018.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 467 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 101/429 (23%), Positives = 200/429 (46%), Gaps = 30/429 (6%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 I + ++ WW++F + L++LVK A + A R+ A+ + A L P + Sbjct: 44 IELPSVLWWQAFASSELDQLVKRAQHNAHDLAAAAARVRQAQARAVIAGAPLLPEVQGGL 103 Query: 105 S---HRFI-----PNLKTNSTG--------QLDSDWKIDLFGQRRHIESS-LANLDSAYA 147 R + L NS+ QL + +++D +G R +S L LD++ Sbjct: 104 DGSRQRLLHGEGSDQLDVNSSEPTYTAFGLQLTASYELDFWGGLRAARASALHGLDASRF 163 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 +L ++S + SY+ +E++ IA L ++ + L + G+ ++L L + Sbjct: 164 DRQTVELTLVSAVADSYLQGIALEEQLRIARLNLRNAREVLNLVETRQRAGSATRLELAQ 223 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + + + E +P LE+ + + ++TLLG P + L ++ Q + I G+ Sbjct: 224 QRSLVAAQERQVPLLEQKRQDSRITLATLLGDP-VQALPVSRQPITTLQ---WPAIGSGV 279 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWS 325 P++L+ RPDI E +LA + A + +A++ + P L+L ++ T N+F +++++ Sbjct: 280 PSELLTRRPDIAAAEARLAAANANVQVARAAMLPKLTLGANLG-TGANTFAEVLDSSYYT 338 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L PIF+ G+++++ AE+ E ++ ++L +VE AL +I ++ Sbjct: 339 LTAGLVAPIFNNGRLRASRELAEAEQDELLENYRGSILAGFADVEKALNAIEGVERQRLW 398 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDL 442 V + + L+ Y G +LL +L+ +R + L +A+ Q V L Sbjct: 399 QDEEVLQARHAFDLAQQRYGAGAETLLTVLETQRTLYLAQDQQAQLRLARLQ---GSVAL 455 Query: 443 YIAIGSGYN 451 Y A+G G+ Sbjct: 456 YKALGGGWQ 464 >gi|167587333|ref|ZP_02379721.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 497 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL N +I QA RI A I S R+ L P S S Sbjct: 55 SLDWATGFGDPQLPKLIDEALADNPSIAQAQARIAKASSYIESSRSTLLPKVEGSYSWNR 114 Query: 108 --------FIPNLK----TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P L + + + W +DL+G+ R + ++++ +A A + A++ Sbjct: 115 QLYSSNALFPPPLGGQWYSENNALASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARI 174 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + S + +Y IA + + + +++ + T G + + I + Sbjct: 175 TLASSIARTYNSLAQLYALRDIAQREIVNRQTVGKITDGRVTAGLDTNVERQTARGNIAT 234 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L N P + + +PADL+ Sbjct: 235 TQASLSDLDGQITSVRYQLAALLGKGPDRGLQIAAPVLN---PGGAVALPDNLPADLVSR 291 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ YP ++L ++F G+ F Sbjct: 292 RPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFS 347 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Q Sbjct: 348 PAVHLPIFDGGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQMDDAQ 407 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ K+ L++I Y+ G L +L+ + A+ + +L + +R + + L Sbjct: 408 RALDASTKAYDLAVIRYKAGLSPQLQVLNADSNRLASEQTVTNLKMRRRDM---QLALIK 464 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 465 ALGGGFD 471 >gi|328470063|gb|EGF40974.1| putative efflux pump channel protein [Vibrio parahaemolyticus 10329] Length = 458 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 210/454 (46%), Gaps = 28/454 (6%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + + + +++D WW +FND +LN+ + Sbjct: 11 ALSAVWLSGCGSLMRSDYQAPEVQV-PANWQQMHVADDVSMD--PWWLAFNDPTLNQYIT 67 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S + +L + + L Sbjct: 68 QVLAQNNDLTLATLTLKKARLQLGLAQDDLFPTLSSSTSGQVQKSLDSGESADSYSTNLS 127 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++++DL+G + + A + +Q D ++++ Y + K+R++++ + Sbjct: 128 VNYELDLWG-KISADVDQAKWTAMASQQDREATAQSLVATTASLYWQIGYLKQRLNLSQR 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ + ++L ++ GA +L +++ + + S+++ E+S + + L Sbjct: 187 NVEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQ 246 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P +Q P+L ++G P+DL+ RPDI+ ++ ++A A D Sbjct: 247 PPKSISANIQMLPEGDMPSL----SVGAPSDLLIRRPDIKAAIYEVKAALANKDAADLDY 302 Query: 300 YPSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 303 LPKLTLTGALGGSSQALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQS 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 358 AIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMD 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ + T + L + + V LY ++G Sbjct: 418 YLNAQEDTRNAQASLLENRYNQFLTQVTLYQSLG 451 >gi|167570123|ref|ZP_02362997.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 498 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPQADAKYSWTR 117 Query: 108 --------FIPNLK----TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSGNALFPPPFGGQWYSENNALASASWELDLWGKNRARLHAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGLRIA---APVLSPGAAVALPENLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 295 RPDIVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGKFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + + ++NA+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQALINALNDVATQVASIRSIDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ V +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLVAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|134295519|ref|YP_001119254.1| RND efflux system outer membrane lipoprotein [Burkholderia vietnamiensis G4] gi|134138676|gb|ABO54419.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia vietnamiensis G4] Length = 537 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 99/427 (23%), Positives = 193/427 (45%), Gaps = 41/427 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + + Sbjct: 62 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMREHW 121 Query: 98 PSSYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLN 155 P + + N+ T N+TG L + +DL+G+ ++ E +L + A A+L Sbjct: 122 PDNV-YYGPGPLANVDTWNNTGTLGLSYHLDLWGKDKNTTERALDTAHATAADARAARLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI + +AH+ + + +L+ + G ++L L + E+ + Sbjct: 181 LEVNVVRAYIGMSMNYALLDLAHETFERQRALADLARKRLQAGLGTQLELSQAESTLPDY 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 E I T E++ ++ H ++ L G A + + +PNL + G+P A Sbjct: 241 ERQIDTYEEAIQLARHQLAALAGKGPGAGDAIK---------RPNLSLDAPAGLPSAMPA 291 Query: 270 DLIRNRPDIRYQEKKLADSVAK-IGIAKSDLYPSLSL---NGSIALTHD--NSFPGYNTH 323 DL+ RPD+ + + D+ A+ I +AK+ YP++ L G +T + N Sbjct: 292 DLLGRRPDV-VAARWMVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFVDFLRSMNGG 350 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+ GP L LPIF+ G++++ + A + + + +TVL A+K++ + + I Sbjct: 351 WTAGPALTLPIFEGGRLRAQLGAASAGYDQAVEHYNQTVLAALKDIADQVVRIRSLDTQK 410 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDL 442 +VE + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 411 KDAARSVEANDRSYRLSREGFRRGLTDYVNVLIAQQQLLRAQETAARIDAERLA-AHAQL 469 Query: 443 YIAIGSG 449 A+G G Sbjct: 470 MAALGGG 476 >gi|207724816|ref|YP_002255213.1| outer membrane efflux protein [Ralstonia solanacearum MolK2] gi|206590041|emb|CAQ37002.1| outer membrane efflux protein [Ralstonia solanacearum MolK2] Length = 327 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 141/281 (50%), Gaps = 26/281 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ ++L +F+ G +L + + +AE+ + S+ + + + H ++TLLG + F Sbjct: 47 EEALKLVQRRFSTGDIGELDVARADAELATARSERIDVARRRAVLEHALATLLGKAPSGF 106 Query: 245 -LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 L Q+ + + + G+P+ L+ RPD+ E+ +A + A+IG+A++ +P L Sbjct: 107 TLPATPLQAADLR------VPPGLPSALLERRPDVAAAERAMAAANARIGVARAAFFPQL 160 Query: 304 SLNGSIAL-THD--NSFPGYNTHWSFGP----KLYLPIFDKGKIKSNIRRAESSAQEQYI 356 L G +HD + + W GP L LPIFD G + +++A ++ +E Sbjct: 161 QLTGGFGFESHDLGDLLKWSSRTWLLGPLVGTALSLPIFDGGARSAGVKQARAAYEENVA 220 Query: 357 TWQETVLNAIKEVENALTSIN--EDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYSLLD 413 ++E VL A +EVE+ L+ + D+ +K+Q AV ++ LS Y G + LD Sbjct: 221 NYREAVLVAFREVEDNLSDLRLLADQ---SKVQDDAVRASTRAAQLSRTRYNAGSVNYLD 277 Query: 414 ILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++D ER + +V V LS + + V L A+G G+ Sbjct: 278 VIDAERNMLSAQRVAVQLSGGR---VNATVGLVKALGGGWG 315 >gi|113867762|ref|YP_726251.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113526538|emb|CAJ92883.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 496 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 101/468 (21%), Positives = 198/468 (42%), Gaps = 45/468 (9%) Query: 20 VGPEYTKPHMPLLPT------------QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + P Y P P T Q+ +WW+ F D L++L+ Sbjct: 33 LAPTYKVPETPSASTFKEAEAAAAESAQWKTATPDE--GQQRGEWWKLFGDADLDRLIDA 90 Query: 68 ALQQNLTILQA----------TERINAAKENILSVRADLFPSSYASISH------RFIPN 111 A N + A T AA+ LSV D S ++ S R P Sbjct: 91 ANVHNQELAAAAARLKQARAFTGATEAARYPQLSVGLDPTRSQPSAASQGLPDGARVAP- 149 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +T + + +++DLFG+ ++++ A+ A +L + + + +Y R Sbjct: 150 -QTVLKARAFASYELDLFGRVASSVDAARADERGAEELYRSVQLALQADVAQAYFALRTL 208 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + L + + L ++ G + L + E+E+ + S + ++E+ Sbjct: 209 DSDRELLNATIRLREGALSLLRTRYEAGEATDLDPARAESELGAARSGLASIERRRANQE 268 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H ++ L G +F + + + P + + G+P++L+ RPDI E+++A + A Sbjct: 269 HALAVLTGVAPAQF--GLAARPFDTAP---VAVPAGLPSELLERRPDIAAAERQMAAANA 323 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP----KLYLPIFDKGKIKSN 343 +IGIA++ +P +SL N F + W GP + +FD G+ +S+ Sbjct: 324 RIGIARAVFFPRISLTALFGFESSDLSNLFKWSSRTWLLGPLVGSTVAQTVFDGGRNRSS 383 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A ++ +E +++TVL+A +EVE+ L + + T L A+ K++ +S Sbjct: 384 LAGARAAHEESVARYRQTVLSAFREVEDGLADVRWLSQQATALDGALAGAKRAQGISRSR 443 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G L ++D +R + + D + A + V L ++G G+ Sbjct: 444 YDAGAVDYLTVIDADRTVLQSQRDANAVAGLRAAATVSLVRSLGGGWG 491 >gi|332883301|gb|EGK03584.1| hypothetical protein HMPREF9456_01651 [Dysgonomonas mossii DSM 22836] Length = 468 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 109/475 (22%), Positives = 206/475 (43%), Gaps = 43/475 (9%) Query: 4 LRAIFSLFIVLLAG---CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 ++ + L ++L G C + Y P + F N + I + W E F D + Sbjct: 6 IKGVVLLGVILSMGFTSCGIVSNYKAPEIDS-QDMFRGENPTDTTTIANIPWREYFTDPA 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHR--FIPNLKTNS 116 L L+ L N + A RI A+ ++ ++ FP+ ++H I N K Sbjct: 65 LQALIDEGLANNFDLRIAYTRIQQAEAGLVVAKSAYFPTIALAGQVTHTRGSIKNGKERV 124 Query: 117 TG---------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G W+ DL+G+ + ANL S +A ++ + ++++ + +Y Sbjct: 125 LGYETGTQFGLGFAVQWEADLWGKLSSKSRAQYANLVSTHAYRNLIQTSLVANIATTYYS 184 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 E++ I + + L K++ G ++ + + EA + + + +PTLE Sbjct: 185 LLALDEQLKITKETIGLLKESTATMTDMMQAGLLNRAGVKQSEALLYNTQVSVPTLESQI 244 Query: 227 RMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R +++S L+G P + ++ QS Q + G+PA ++ RPD+ E Sbjct: 245 RQLENSLSVLVGRKPGPIYRTAIKDQSVPTQ------LQYGVPAQMLAKRPDVIQAEMGF 298 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIK 341 + +A+ LYPSL+L S N+ F N + L PIF +++ Sbjct: 299 RYAFEMRNVAQRSLYPSLTLGTSTIGYASNTLSQFFQPANILANIVGGLTQPIFAGNQLR 358 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENAL----TSI--NEDK-KIVTKLQHAVELHK 394 + A++ +E +T+++TVL A +EV + + +S+ NED+ K V L AV+ K Sbjct: 359 GQYKVAKAQQEEALLTFEQTVLKAGQEVSDIMYIYESSLRKNEDRAKQVEALFTAVDDTK 418 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + NY ++L+ E+ + ++ K + ++ V+LY A+G G Sbjct: 419 VLLKAGEANYT-------EVLNAEQNLLQAQLGQVNDKLEQLQATVNLYRALGGG 466 >gi|327542361|gb|EGF28845.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhodopirellula baltica WH47] Length = 475 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 107/451 (23%), Positives = 199/451 (44%), Gaps = 20/451 (4%) Query: 10 LFIVLLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L +LL G P+ T P FS +I D +WW SFND +LN + +A Sbjct: 13 LIAMLLVGVGCANPDSTWTFRTQTPPPFS--TPGEVIPPD--RWWTSFNDPTLNAEIDVA 68 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS-TGQLDSDWK 125 LQ N T+ A +R+ AA+ +DL+P + A P +S LD+ ++ Sbjct: 69 LQGNFTLAAALQRLYAARAVTRREASDLWPDLNGVADYGSTMGPGRDRSSFIWGLDAGYQ 128 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL+G+ +++ + L + +++ ++ +I + ++ LD Sbjct: 129 VDLWGEIESRVDAERLRTSATREDYHAIALTLTAEIARTWFSLIEGHAQIKLLNEQLDNN 188 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + + L +F G +++ +++ I + + H ++ LLG E Sbjct: 189 EMGLALQEARFASGLIRSPDVLRQRQLVEATLEQIVVEKVRIEVLEHQLAVLLG----EM 244 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR--YQEKKLADSVAKIGIAKSDLYPS 302 + P L + G+P++L++ RPD+R Y + AD + A S YP Sbjct: 245 PQAAGYDPGSILPPLPPLPSTGLPSELLQRRPDVRRDYLAFRAADR--DLASAISAQYPR 302 Query: 303 LSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++L GS+ L S W S G ++ P+FD G+ ++ + R + +E + + + Sbjct: 303 INLTGSL-LNVSESPETLFRDWFVSIGAQMIAPLFDGGQRRAEVDRNAAVKRELFNVYGQ 361 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T+LNA EVE+AL + + L++ VEL ++S Y + LD+L A Sbjct: 362 TMLNAFSEVEDALAQERYQLERIEHLENQVELARQSSEQLREQYLISDATYLDVLSAITA 421 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + A+ L V LY+A+ ++ Sbjct: 422 QQRLQRETLSAQLDLVLIRVSLYLALAGDFD 452 >gi|161525038|ref|YP_001580050.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189350219|ref|YP_001945847.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160342467|gb|ABX15553.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189334241|dbj|BAG43311.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 552 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 191/438 (43%), Gaps = 49/438 (11%) Query: 13 VLLAGC-TVG---PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +++AGC ++G P+ T+ L I + WW ++ D L+ + A Sbjct: 19 LIMAGCASMGDNKPQSTRIDANALDAGAEIRAADRDAGWPASDWWRAYGDPQLDAWIAAA 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS-----------HRFIPNLKT--- 114 N T+ A R+ A+ R+ P ++S + P T Sbjct: 79 QAGNPTLAAAQARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLADTDTW 138 Query: 115 NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 N+TG L + +DL+G+ ++ E +L + A AKL + ++ +Y+ Sbjct: 139 NNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVG------- 191 Query: 174 ISIAHQILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +S+ + +LDL ++ E L+H + G ++L + + E+ + E I T E++ Sbjct: 192 MSMNYALLDLARETFERQRALADLAHKRLQAGIGTQLEVSQAESTLPDYERQIDTYEEAI 251 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEK 283 ++ H ++ L G P K S L P + +PADL+ RPD+ + Sbjct: 252 QLARHQLAALAGKGPGAGDAIRRPKLS------LDAPAGLPSAMPADLLGRRPDV-VAAR 304 Query: 284 KLADSVAK-IGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDK 337 + D+ A+ I +AK+ YP++ L G +T + N W+ GP L LPIF+ Sbjct: 305 WMVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++++ + A + + +T++ A+K++ + + I +V +++S Sbjct: 365 GRLRAQLGAANAGYDRAVEHYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANERSY 424 Query: 398 SLSMINYRQGRYSLLDIL 415 LS +R+G +++L Sbjct: 425 RLSREGFRRGLTDYVNVL 442 >gi|293604480|ref|ZP_06686885.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] gi|292817061|gb|EFF76137.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] Length = 481 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/475 (21%), Positives = 218/475 (45%), Gaps = 43/475 (9%) Query: 5 RAIFSLFIVLLAGCTV---GPEYTKPHMPLLPTQFSI-GNSKNLINIDTLKWWESFNDTS 60 R + ++ ++ L+GC + GPE P + L + + G+ N +WW+ + D+ Sbjct: 3 RLLSTVLVLALSGCALMEPGPE---PVVALDAAKLGLTGHDTAWPNT---QWWQRYGDSQ 56 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFI---- 109 LN L+ AL + ++ A R+ A + + RA L P A+ +S +I Sbjct: 57 LNALMDEALANSPSMSAAQARLAKANAAVSTARAPLLPRVDANYTLNREHLSADYIYPAP 116 Query: 110 --PNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + +++ LD +++D +G+ R ++S+++ ++A A A+ + S + +Y++ Sbjct: 117 LGGTVVSDNRLALDFTYELDFWGKNRSRLKSAVSEREAATADAQAARNMLASATVRAYLN 176 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ + + +++ + L+ ++ G +++ + + E+ + + + ++ E + Sbjct: 177 LQNAFAQRDVLKRVIAQRADVLSLTQGRYGAGLDTQVEVKQAESSLAAGQVELTQTETTL 236 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI---GIPADLIRNRPDIRYQEK 283 + ++ L G Q+ + +L P + IP DL+ +RPD+ Sbjct: 237 AQLRNQVAALTGAGP-------QRGQSLVAVDLSAPAGVVPAAIPLDLLGHRPDVVASRW 289 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + + + I AK++ YP+++L G AL N FGP + LPIF G++ Sbjct: 290 RAEAARSAIDTAKAEFYPNVNLTAFAGFQALGTGNLLGAAARTAGFGPAVTLPIFHGGEL 349 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +N+ + A + + VL+A+ +V +AL + + + + A E + + L+ Sbjct: 350 NANLAGRRADADLAISDYNQAVLDAVHQVADALDGLRLLDQERAQQRQAREAIEAAYDLA 409 Query: 401 MINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y+ G + + +L + A+++ DL I QL +L A+G GY P Sbjct: 410 VNRYKAGLGNYITVLIAQTGVLTQARLDTDLRIRAYQL---DANLANALGGGYAP 461 >gi|326388022|ref|ZP_08209626.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] gi|326207523|gb|EGD58336.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium nitrogenifigens DSM 19370] Length = 473 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 116/469 (24%), Positives = 204/469 (43%), Gaps = 41/469 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMP--LLPT---QFSIGNSKNLINIDTLK--WWESFNDTS 60 S L+ GC++ P Y H+P + PT + G + + D K WW F D + Sbjct: 4 LSALSALVGGCSMAPTY---HVPTSVTPTPTFKADPGWAVAQPSDDAAKGAWWTLFGDDT 60 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR--FIPNLKTNS 116 LN L L N + A + RA L P S A ++H+ F K S Sbjct: 61 LNGLEARVLVTNQNLAYYRAAYAQALATVRVDRAALLPTASGSAGVTHQDTFASGSKAVS 120 Query: 117 TGQL--DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 T + + W DL+G + ++ A +++ A++ A L+ L Y R + Sbjct: 121 TFSVTGSASWVPDLWGNLTNTTRAARAQAEASAAELANATLSAQGTLASDYFALRGIDAQ 180 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + Y++++E++ KF G S + + + E+ L++ I Sbjct: 181 AVMLDATIVSYRRSLEVTRNKFAAGTVSSADVDTARTTLANAEASRRDLDRQRAAYEAAI 240 Query: 234 STLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIRNRPDIRYQEKKLADSVAK 291 + L+G P+T L + + P +P GI P+ ++ RPDI E+ +A + A Sbjct: 241 AVLVGENPSTFSLAQV-----TWHP--VVPDVPGIVPSAVLERRPDIANAERLVAAANAN 293 Query: 292 IGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 IG+AK+ +P+++L GS + T + F + WS G + D G + +R A Sbjct: 294 IGVAKAAFFPTVTLTASGGSQSSTIGSLFGASTSLWSLGASAAETLIDWGARSAKVRGAR 353 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSIN----EDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ T+++TVLNA +EVE+ L ++ ED + T Q A ++ +++ Y Sbjct: 354 AAYDASVATYRQTVLNAFQEVESDLAAVGAYRAEDAQYATASQSA----DRAETVTRNQY 409 Query: 405 RQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + + TA+V + L+ RQ + V L AIG + Sbjct: 410 QAGTVDFTSVTQAQATAYTARVNLILNTVYRQ--TTAVALIQAIGGQWT 456 >gi|300726834|ref|ZP_07060264.1| multidrug resistance protein, FusA/NodT family [Prevotella bryantii B14] gi|299775947|gb|EFI72527.1| multidrug resistance protein, FusA/NodT family [Prevotella bryantii B14] Length = 464 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 117/477 (24%), Positives = 216/477 (45%), Gaps = 56/477 (11%) Query: 7 IFSLFIVLLAGC-TVGPEYTKPHM---PLLPTQFSIGNS---KNLINIDTLKWWESFNDT 59 + L + L+ C T+ +Y +P + L+ SI ++ + + L W F D Sbjct: 8 VIGLAALTLSSCKTLYGKYERPDVNTKGLVRDTASIADTLAVADTTSFANLPWRSVFTDP 67 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------- 111 L +L++ L+ N +L A ++ A+ + + + PS F PN Sbjct: 68 HLQELIEKGLKNNPDLLNAALNVDMAQAQLKAAKLSFLPS------FTFTPNGTLAGVQD 121 Query: 112 ---LKTNSTGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + T +++ W +DL+G+ +R + +L L S QV + + N+I+ + Y Sbjct: 122 VSGITKTYTLPINASWNVDLWGKLLSSKRAAQVAL--LQSKDYQVSV-QTNLIANIANMY 178 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK-LEAEIKSIESDIPTLE 223 +++ I + + L K E+ L+ + + V+ EA S+ + L Sbjct: 179 YTLLMLDKQVEIVNDMEKLTKDTWEIYKLQKDAILGIRSTAVQSAEANYYSVLTQKEDLL 238 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + R +++S +LG E H + + + Q NL + G+ L+ NR D+ E Sbjct: 239 RQIRTTENSLSLVLG----ESGHAIARGDID-QQNLPTSFSTGVGIQLLNNRADVHAAEM 293 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSF--PGYNTHWSFGPKLYLPIFDKGK 339 LA I A++ YP+L+++ + A ++ N+ PG W+ L PIF GK Sbjct: 294 NLASCFYAIETARASFYPALTISATGAFSNSLGNAIVNPG-KLLWNAIASLAQPIFQNGK 352 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVEL 392 + + +R +E+ ++ Y TWQ +VL+A EV NAL N ++K + L+ VE Sbjct: 353 LTAALRVSEAQYKQAYNTWQNSVLSAGNEVSNALVLYNTSAKKSKLEEKQIAALKKNVED 412 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ M+ + NY Q + +L+ + +K+ D S K Q + V+LY A+G G Sbjct: 413 TRELMASAGSNYLQVITAESSLLNAQ--LSKISDDFS--KMQ---AIVNLYYALGGG 462 >gi|150006940|ref|YP_001301683.1| putative multidrug resistance protein [Parabacteroides distasonis ATCC 8503] gi|149935364|gb|ABR42061.1| putative multidrug resistance protein [Parabacteroides distasonis ATCC 8503] Length = 480 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 204/476 (42%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE + LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELSMDERISLPESGEMGMNDTTF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFQQSMERIAMSRAALQRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + IES + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKKEGAETQLAVDQFYARVLLIESKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMGLVASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRNEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|254245376|ref|ZP_04938697.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia PC184] gi|124870152|gb|EAY61868.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia PC184] Length = 522 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 179/414 (43%), Gaps = 63/414 (15%) Query: 15 LAGCT-VGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWES 55 LAGC P P MP + QF +G WW+ Sbjct: 24 LAGCAWFAPSGEPPAMPSPAHYGAAPQVEQTVSAHGVAQQFEVGAQP------VPDWWKQ 77 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--- 108 + +LN LV L+ + T+ A+ ++AA+E + + + + PS A + R Sbjct: 78 YRSDALNALVDEGLRNSPTLSAASHSLDAAREQLRGQIGSSMLPSIDAGGQATRQRALGV 137 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKL 160 IP L + GQL + + +DLFG R +LA +D + Q++ A+ + + + Sbjct: 138 PIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESARRALAANI 197 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I +I +++ L + + G+ S+ + + + +P Sbjct: 198 VTASITVSVLNAQIDTTERLVALANDQAHDAERRHALGSASRSDALNARQSADTFAASLP 257 Query: 221 TLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + H ++ L+G PA L +L++P + I +P+DL++ Sbjct: 258 ALRQQRDSARHALAVLVGRTPDRPPADLALT-----------DLHLPEQVPIVVPSDLLQ 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPK 329 +RPDI+ + L + A++G+A + ++P LSL+ ++ S+P G W+ G Sbjct: 307 SRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMG-KGGFSWPAMLSGAGAIWNVGAS 365 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 L PIF G + + R A+++ + +++ VL A + V ++L ++ D + + Sbjct: 366 LSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAEAL 419 >gi|226942561|ref|YP_002797634.1| RND efflux system, outer membrane lipoprotein [Azotobacter vinelandii DJ] gi|226717488|gb|ACO76659.1| RND efflux system, outer membrane lipoprotein [Azotobacter vinelandii DJ] Length = 504 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 197/428 (46%), Gaps = 39/428 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR-- 107 +WW+++ D LN V++AL + + A R+ A+ ++ P Y ++ R Sbjct: 61 RWWQAYGDPQLNAWVEMALADSPNLAVAAARLRQARTLAGVSESEHAPQVKYDAMVQRKH 120 Query: 108 -------FIPNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + P + ++TG L + +DL+G+ H E +L+ + A + A L Sbjct: 121 WPDDQYFYGPGMLADTTGWNATSSLGLSYDLDLWGRLHSHTERALSLAEVAATEERAAAL 180 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + ++ +YI R+ IA L ++ + L+ + G ++L + + EA + Sbjct: 181 ELQNNVVAAYIQLALHHARLEIAEAELKQREQLLALARERLAIGLGTQLEISEAEAPLPE 240 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ-KQSNNFQPNLYIPINIGIPADLIR 273 I + ++ + + ++ L G E + K S + +P+L P N+ P +L+ Sbjct: 241 AHRRIDLIHEAIALTRNQLAALAGKGPGEGARLERPKLSLHGEPSL--PSNL--PLELLG 296 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNT-HWSFG 327 RPD+ + ++A I +AK+D YP+++L +GS N N + G Sbjct: 297 RRPDVVARRWQVAAEARSIEVAKADFYPNVNLVAFFGSGSTTGEMLNFLTNANKLTYGIG 356 Query: 328 PKLYLPIFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 P L LP+FD G+ + + A ++ A EQY +T+++A+K V + L ++ + Sbjct: 357 PTLSLPVFDGGRRRGQLGAATAAYDMAVEQY---NQTLVDALKSVSDHLIRLHSLHEQEI 413 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK---SYVD 441 + H +E ++ L+ YR+G L D + A +++ + +R A+ + Sbjct: 414 FVGHGLETAERRYRLAEEAYRRG---LTDYRSVLEAQSELFEQQFLEQRVHAEHLTAQAG 470 Query: 442 LYIAIGSG 449 L++A+G G Sbjct: 471 LWVALGGG 478 >gi|330875518|gb|EGH09667.1| outer membrane protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 472 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 106/478 (22%), Positives = 207/478 (43%), Gaps = 51/478 (10%) Query: 11 FIVLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + LLAGC + P+Y +P P+ LP + ++ + D ++W F D L +L Sbjct: 10 LMALLAGCVNLAPDYQRPEAPVSEQWLPAAAANPSASASVPTD-IEWQNFFTDNRLVRLQ 68 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS-----------------------SYA 102 +AL N + A+ + A+ RA P+ + Sbjct: 69 TLALINNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSATHTRTSASASASTSTTGRS 128 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVI 157 SI+H + L +S +++D+FG Q +E LA ++ + ++++I Sbjct: 129 SINHEYSAQLGLSS-------YELDVFGRIQNLQDEALEDYLALTETRRS----TQISLI 177 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ ++ + + +A L +++ +L+ G +S L + + + ++S Sbjct: 178 AEVATGWLTLAADNQLLKLAEDTLASQRQSYDLTQRSHALGGSSGLEVAQAQTTVESARG 237 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 D+ + + + + L+G + L + Q + + +P+ L++ RPD Sbjct: 238 DVAQYQSQVLQDRNALRLLVGSDIPDALLPAADAQSVAQ---LVQVPDELPSSLLQRRPD 294 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 + E L + IG A++ +PS++L + + F + WSF P + +PI Sbjct: 295 VLSAEHSLKSANIDIGAARAAFFPSITLTANAGSASSSLSGLFKAGSGAWSFAPSISVPI 354 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G ++ + A+ Q Q T+Q+T+ A KEV +AL + + V Q + + Sbjct: 355 FDGGANRATLDSAKIENQIQIQTYQQTLQTAFKEVADALAVRSTLDERVGAQQAYTDASR 414 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 KS L+ YR G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 415 KSYELADALYRGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 472 >gi|256830128|ref|YP_003158856.1| NodT family RND efflux system outer membrane lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256579304|gb|ACU90440.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfomicrobium baculatum DSM 4028] Length = 465 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/375 (22%), Positives = 181/375 (48%), Gaps = 30/375 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + + LN+L+ AL+ I A R+ A+ + L+P+ AS + Sbjct: 43 EWWRALHSEDLNRLMDEALRSAPDIRTALARLEQAEAAAQKTGSALWPTLDAS-AEAARS 101 Query: 111 NLKTNSTGQLDSD---------WKIDLFGQRRHIESS-----LANLDSAYAQVDIAKLNV 156 K ++ Q++SD +++DL+G+ R + + +A+ D + A L + Sbjct: 102 WTKLHAQNQVESDTYGLGLAASYELDLWGRVRALRQADTLFVMASRDD----LRTAALTL 157 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 +++ ++I ++++++ + + L+F S L +++ I E Sbjct: 158 SGEVVGAWISLCSTRQQLAVLEEQQRTNAAILSTLELRFANSLASALDVLQQREAIAQTE 217 Query: 217 SDI-PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + I P ++ R+ + I+ LLG P + L + + IP G+PADL+R Sbjct: 218 TVIFPLRSEAVRLE-NRINLLLGKAPGSVDL----ASATTLPEPMPIP-GTGLPADLLRE 271 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYL 332 RPDIR ++L +S + A++D P+L L G+ + ++ ++ +W + L Sbjct: 272 RPDIRAAWQRLLESGWDVAAARADRMPALRLTGNFEHSGGDASRIFD-NWLANLAASLTA 330 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PI D G ++ + R E+ +E+ T+++TV +A+ EV+ A++S+ + ++V L + Sbjct: 331 PIIDGGSRRAEVERQEAVRRERLATYEKTVFSALSEVDTAVSSVLKQIELVRALTTQRDT 390 Query: 393 HKKSMSLSMINYRQG 407 + +++ + I Y+ G Sbjct: 391 AQAALTSARIRYQNG 405 >gi|329954103|ref|ZP_08295198.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] gi|328528080|gb|EGF55060.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides clarus YIT 12056] Length = 460 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 105/458 (22%), Positives = 192/458 (41%), Gaps = 33/458 (7%) Query: 13 VLLAGCTVGPEYTKPH----MPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVK 66 LL+ C + Y +P L + G++ + N L W E F D L L++ Sbjct: 13 ALLSSCHIYKSYDRPEDITVEGLYRDTVAGGDTLAADTANFGNLPWKEVFTDARLQALIE 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS 122 AL N + A + A+ ++S R P S ++S + + + Sbjct: 73 QALINNPDLRSAALTVKQAQAALMSARLAYAPMLSLSPQGTVSSWDKGKATQTYSLPVTA 132 Query: 123 DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+IDLFGQ +R + SL Y Q + VI+ + Y ++ I+ Sbjct: 133 SWQIDLFGQLLNPKRKAQVSLKQTQF-YEQA--VQTQVIANVANMYYTLLMLDRQLQISE 189 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 D+ K+N+E + ++ + + + +P + +S R + + +L Sbjct: 190 ATCDILKRNLETVEAMKEAAMANSAAVEQSRTAYAQVLASLPDIRQSIRETENALCLMLN 249 Query: 239 YPATEFLH-YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 PA +++Q L + GIP L+ NRPD++ E LA S A++ Sbjct: 250 QPAQSIARGALEEQ------QLPSEFSTGIPLQLLSNRPDVKAAEMSLAASYYDTNSARA 303 Query: 298 DLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 YP ++L+GS T+ PG + G L P+F +G + +++A++ ++ Sbjct: 304 AFYPQITLSGSAGWTNSAGSAIVNPGKLLASAIG-SLTQPLFYRGANIARLKQAKAQEEQ 362 Query: 354 QYITWQETVLNAIKEVENAL--TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 I +Q T+L A EV NAL + DK + ++Q V +K+ + + G + Sbjct: 363 AKIQFQTTLLQAGNEVSNALYQYQMTSDKAVSREIQ--VNSARKAAEDTKELFNLGTSTY 420 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L E++ ++ +S + LY A+G G Sbjct: 421 LEVLSAEQSYLSAQLSEVADTFDRMQSVISLYQALGGG 458 >gi|255691191|ref|ZP_05414866.1| multidrug resistance protein, FusA/NodT family [Bacteroides finegoldii DSM 17565] gi|260623103|gb|EEX45974.1| multidrug resistance protein, FusA/NodT family [Bacteroides finegoldii DSM 17565] Length = 454 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 105/471 (22%), Positives = 210/471 (44%), Gaps = 52/471 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+ + +DT L W E F D L Sbjct: 6 ILSAATLVLSSCGI---YNK-YKPVSEVPEGLYGSEPVAAVDTANFGNLSWREVFTDPYL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-- 119 L+ AL +N + A R+ A+ ++L+ + P+ + P +S G+ Sbjct: 62 QTLIDSALVRNTDMQTAHLRVKEAEASLLTSKLSYLPTLF------LAPEGAVSSLGRAK 115 Query: 120 --------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH-- 169 + + W++D+FG+ + ++ +AY Q + V ++L+ + +A + Sbjct: 116 ATQTYSLPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVAAMANAYYTL 172 Query: 170 --FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + IA +K+++ + G ++ L + EA +I + + L++ Sbjct: 173 LMLDSQYEIAVATEAAWKESVRTTRAMKNAGMVTEAGLAQTEATYYNICTTVLDLKEQIN 232 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKL 285 ++++ LL E H +Q+ N +P N +G+P ++ NRPD+R E L Sbjct: 233 QAENSLALLLA----ETPHEIQRGKLG---NQQLPENFSVGVPLQMLANRPDVRSAEFSL 285 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIK 341 A + A++ YPS++L+GS T+ PG + L P+F+KG Sbjct: 286 AQAFYTTNAARAAFYPSITLSGSAGWTNSAGSMIINPGQFLASALA-SLTQPLFNKGLNI 344 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMS 398 + ++ A++ +E +++++T+LNA EV AL + E K +++ KS+S Sbjct: 345 AQLKIAKAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKAAFYDKQVASLQTASKSIS 404 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L M + G + L++L ++ ++ + + + LY A+G G Sbjct: 405 LLM---KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGMITLYQALGGG 452 >gi|294674517|ref|YP_003575133.1| NodT family RND efflux system, outer membrane lipoprotein [Prevotella ruminicola 23] gi|294471725|gb|ADE81114.1| RND efflux system, outer membrane lipoprotein, NodT family [Prevotella ruminicola 23] Length = 459 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 194/466 (41%), Gaps = 45/466 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI----DT-----LKWWESFNDTSLNK 63 +LL+ C + Y K P + T+ I ++++L + DT + W F D L Sbjct: 12 LLLSSCGL---YNKYERPEVDTKGLIRDTQSLTDTLAVQDTTTFGNMPWRSVFTDPQLQA 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 L++ L N +L A + E + + PS S +T Sbjct: 69 LIQQGLDNNPDLLNAALNVQMVNEALKVAKLAFLPSVAVSPQGSLTSFDGAAATKSYSLP 128 Query: 120 LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 + + W +DLFG + S+ L + + K NVIS + Y ++ I Sbjct: 129 ISASWNVDLFGNLLSAKRSAQMQLIATKDYQTVVKTNVISTIANLYYTLLMIDRQMEIVT 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVK-LEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L K+ E A + + V+ EA ++S LE+ R +++S LL Sbjct: 189 DMEQLTKETWEKMQFMHENRAGYRSTAVQSAEAAYYQVQSQRVDLERQMRETENSLSLLL 248 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G P + + +L ++ G+ ++ NR D+ E LA + A+S Sbjct: 249 GQPGQSI-----ARGKFAEQSLPTELSAGVGIQMLANRADVHQYEMSLAQCFYDVETARS 303 Query: 298 DLYPSLSLNGSIALTHDNSF--PGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 YPS+S+ G+ A T+++ PG W S L PIF G+I + ++ A+ ++ Sbjct: 304 RFYPSISITGTAAFTNNSGSINPG---KWLLSAVGSLTQPIFQHGQIVAGLKVAKMQYEQ 360 Query: 354 QYITWQETVLNAIKEVENALTSINE-------DKKIVTKLQHAVELHKKSM-SLSMINYR 405 Y WQ + A EV NAL + N D K V L+ VE K+ M S S Y Sbjct: 361 AYNKWQNAIYKAGNEVSNALVAYNSYSQKAELDGKRVEVLKKNVEDTKRLMESSSNTTYL 420 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + ++L+ E A EV ++K Q + V LY A+G G N Sbjct: 421 EVITAQSNLLNAEIA----EVSDQLSKMQ---AVVSLYQALGGGAN 459 >gi|83720224|ref|YP_443140.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83654049|gb|ABC38112.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia thailandensis E264] Length = 601 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 103/480 (21%), Positives = 208/480 (43%), Gaps = 45/480 (9%) Query: 5 RAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 R F+L ++ ++AGC V P+ + L +I ++ WW ++ Sbjct: 40 RGTFALAVLAISLIMAGCASMGDVAPQAKQIDPASLDAGAAIAAAERDAGWPAADWWRAY 99 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP---- 110 D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 100 RDPQLDAWIAASLAGNPSLAAAQARVREAQSLARVAHAEELPQLNGNLSLMRQHWPDNVY 159 Query: 111 -------NLKT-NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 N T N+TG L + +DL+G+ + + + +L + A A+L + + ++ Sbjct: 160 YGPGPLANADTWNNTGTLSLSYHLDLWGKDKNNAQRALDAARARAADARAAQLELEANVV 219 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +YID + IAH D + EL+ + G ++L + + EA + I + Sbjct: 220 RAYIDFAKNYALLDIAHATYDRQNELAELARKRLRAGIGTQLEVSQAEAPLPDYSRQIDS 279 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPD 277 E++ ++ H ++ L G ++ +P L + N G+P A+LI RPD Sbjct: 280 YEEAIQLGRHQLAALAG-------KGPGAGASLGRPKLALDANAGLPSALPAELIGRRPD 332 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKLYL 332 + + I +AK+ YP++ SL G +++ N WS GP L L Sbjct: 333 VVAARWTVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTL 392 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHA 389 PIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + A Sbjct: 393 PIFEGGRLRAQLGVAAAGYDQAVEHYNQTIVGALKDIADNVVRLRSLDSQQKDAAR---A 449 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V L ++S LS + +G +++L + + + + + ++ L A+G G Sbjct: 450 VSLTRRSYDLSHTGFSRGLTDYVNVLIAQSQLLTAQENQTRVEAARLAAHASLMAALGGG 509 >gi|294669111|ref|ZP_06734195.1| IbeB [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308925|gb|EFE50168.1| IbeB [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 488 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 111/492 (22%), Positives = 212/492 (43%), Gaps = 68/492 (13%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +L + +L C +PL LP + N + +T +WW++++D L Sbjct: 9 LALAVCILTACQ------STQIPLKSEITLPEAYGQ-NRAAQGSAETARWWQNWHDPVLG 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-----------------IS 105 +L++ L Q+ I A R+N A+ AD +S S I Sbjct: 62 RLIEQGLAQSYDIRIARSRLNEARAQARLAAADTGINSGISAESRATHSEINNPLDDGIR 121 Query: 106 HRFIPNLKTNSTGQ-------------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDI- 151 R N +T G+ + + W+ D+FG++R ++ AN + Q + Sbjct: 122 GRLAQNPQTEKLGRDTLSGSQNLLAAGIQASWEPDIFGRKRS-DADAANYAALGRQEALY 180 Query: 152 -AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+L + ++ +Y++AR + R A + + +K ++ + +F G T + + ++ Sbjct: 181 GAQLLLAGEIAANYLNARAVQARRQTAAANIAVLRKMLQYAQGRFRAGHTGAHDVKQAQS 240 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + + + TL+ + V NI+ L G F ++ P P Sbjct: 241 ALAAARAAQSTLDAEYGAYVRNIAVLTGQVPQHF-RLPDSPADILSAQPAAPSGQ-TPQG 298 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWS 325 LI RPD+R + ++ AK+ AK+DL P ++ G I L D+S G+N+ Sbjct: 299 LIERRPDLRARAAEVRAYAAKLAGAKADLLPRFTIQFLGQGGRIELEGDHSLHGWNSLIK 358 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G + +P+F G+IK+NI A++ + + + T+L A+ EV++A S + Sbjct: 359 IG--ISIPLFTNGRIKANIDAADARLKTALLNYDRTLLTALGEVDSAYQSQTALTRQSKL 416 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL-------AKS 438 LQ +++ + + +R G +L + L + +D A+ +L A++ Sbjct: 417 LQQSLQQAQSRADGAQKLFRYGSLTLDEAL-------RARLDEQEARERLIRSQLARAQA 469 Query: 439 YVDLYIAIGSGY 450 V+LY A+G G+ Sbjct: 470 TVNLYKALGGGW 481 >gi|296282720|ref|ZP_06860718.1| putative outer membrane efflux protein [Citromicrobium bathyomarinum JL354] Length = 500 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 207/468 (44%), Gaps = 43/468 (9%) Query: 17 GCT-VGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 GC + P+ +P + LP F N++N WW +F D L+ LV AL NL Sbjct: 16 GCVNLAPDRAQPQVTAQLPEGFP--NNENAAPYRPTAWWTAFQDPVLDALVADALADNLD 73 Query: 75 ILQATERINAAKENILSVRADLFP--SSYASISHRFIP-------------------NLK 113 I +A+ R+ A R+ L P S+ S+ P ++ Sbjct: 74 IAEASARVAQAAAQARVARSALLPRVSASGDASYSNTPLSGSAFGGFPGGGGGAQSSRIE 133 Query: 114 TNSTG-QLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHF 170 +S L + ++IDLFG+ R+ + + A D+ A+ D +L ++ I +Y + Sbjct: 134 NDSYSLGLGASYEIDLFGRVRN-DYAAARADALAAEYDYRTVQLAAAAETIATYFEIVDS 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +I + + +DL + +F +G T L +++ + +++++ +P E + Sbjct: 193 RRQIELTLETIDLLADRAARTEERFRRGLTQSFELYQVQQDQRNVQASLPQREAALDDAE 252 Query: 231 HNISTLLG-YP-ATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLAD 287 + L+ YP A E + + P L + + G+PADL+ RPD+ +L Sbjct: 253 GRLGVLVRVYPQAVE-----ARLARPLTPQLVFDEVPAGLPADLLGQRPDVAAAWARLEA 307 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---YNTHWS--FGPKLYLPIFDKGKIKS 342 + A++G K++ +PS++L+ T G +W+ L PIF G+I + Sbjct: 308 ARARVGARKAERFPSITLSAQPG-TQGGDIGGALDVANNWAVNLAAGLTAPIFQAGRISA 366 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 NI A+++ + TVL A +E +A+ E+++ + E + S L Sbjct: 367 NIEAAKATYDAAAANYARTVLTAFREANSAIEDYEENRQRYRLILAQREEARFSADLQAR 426 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G + LD RA +VE LS A R +A S + ++ A+G + Sbjct: 427 RFDAGVGDYVSYLDALRALYQVESALSSAGRTVAISRLGIHRALGGDW 474 >gi|332530605|ref|ZP_08406539.1| outer membrane drug efflux lipoprotein [Hylemonella gracilis ATCC 19624] gi|332039942|gb|EGI76334.1| outer membrane drug efflux lipoprotein [Hylemonella gracilis ATCC 19624] Length = 464 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 22/368 (5%) Query: 22 PEYTKPHMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 P + +P +P Q G+SK ++ L W D L +LV+ AL NL + A Sbjct: 27 PGALRSELPADTVPAQLQ-GSSKG--DLPALAWRGIVTDPRLVQLVERALVNNLDLRLAA 83 Query: 80 ERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTN-STGQLD-----SDWKIDLFG 130 I+AA+ A L P+ S R L T +T Q + W+IDL+G Sbjct: 84 LNIDAARAAYRITDAALLPTVTTSGTVTRARSSAALGTGVATTQYGVSLGVAAWEIDLWG 143 Query: 131 QRRHIESS-LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 + ++S+ LA+ S + +IS+ + +++ ++ +A + LD +K+ + Sbjct: 144 RLGDLKSAALASYLSKEETRASVQATLISETLQAWLTLSADRQLARLAQETLDDWKETLS 203 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ + GA S L + +A +++ +D+ ++ + + + LLG E L + Sbjct: 204 LTERRQALGAASTLDVAAAQASVQTARADLASVRTQVDQDRNALRVLLGGELDEALLPGE 263 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 +++++ +P ++ A L+R RPD+R E+ L A + A++ L+PS+SL S Sbjct: 264 QEADDLARLPAVPGDLS-SAVLLR-RPDVRAAERSLQAQEANVAAARAALFPSISLTTSA 321 Query: 310 ALTHDN----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 + S G T WS P + LPIFD G K+ ++ A Q +Q+T+ A Sbjct: 322 GQASTSLETLSQSGQRT-WSIAPSISLPIFDGGAAKAQLQSARVDQQIALTNYQKTLQTA 380 Query: 366 IKEVENAL 373 +E NAL Sbjct: 381 FEEAANAL 388 >gi|329907438|ref|ZP_08274660.1| RND efflux system, outer membrane lipoprotein, NodT family [Oxalobacteraceae bacterium IMCC9480] gi|327546968|gb|EGF31868.1| RND efflux system, outer membrane lipoprotein, NodT family [Oxalobacteraceae bacterium IMCC9480] Length = 474 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 103/473 (21%), Positives = 207/473 (43%), Gaps = 40/473 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKL 64 ++ + GC VGP Y +P + + D L WW F+D LN L Sbjct: 12 LAVLVATAGGCAVGPTYEQPALATPAAYKEVSGWVRATPADALDRGTWWTLFDDAGLNAL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN------------- 111 N I A A+ + RA LFP S R Sbjct: 72 AGSVEVSNQNIAAAAAAYAQARALVREQRAGLFPVVSLDGSGRRAGGESAGAGNSAGGSG 131 Query: 112 ---LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 + + W+ D++G+ R ++S+ A ++ A + A L +L +Y Sbjct: 132 NNSAGNTYQASIGASWEPDVWGRLGRTVDSASAGAQASAADLASALLAAQGELAINYFSL 191 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R + ++ + Y++++E++ ++ G K L++ + ++ + ++++ LE+ Sbjct: 192 RQTDAQSALLQSTIAAYQRSLEIAQNRYQAGVAPKTDLLQAQTQLANAQAELVGLERQRT 251 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 H I+ L+G F + + P + IG+P+ L++ RPDI E+++A Sbjct: 252 QLEHAIAVLVGQAPGNFTLVIAPWAATL-PQ----VPIGVPSTLLQRRPDIAAAERRVAA 306 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + +IGIA+S LYP+L+L+ S + + F + WS G +F+ G ++ I Sbjct: 307 ANEQIGIAQSALYPNLNLSASYGVGATRVSDLFSASTSVWSLGLSAAQVLFNAGATRARI 366 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN- 403 A+++ Q+ +++TVL A + VE+ L + +++ + Q EL ++ + + Sbjct: 367 DEAQAAQQQAAARYRQTVLVAFQGVEDQLAA----TRVLMQQQPLRELASRAADETEVQT 422 Query: 404 ---YRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 YR G+ + +++ + + +A+ + + RQ+ + V L A+G G+ Sbjct: 423 LNRYRAGQVAYTEVVTAQASAFSARRALVQLASDRQV--TAVALIQALGGGWG 473 >gi|83719074|ref|YP_443076.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83652899|gb|ABC36962.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 527 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------- 98 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P Sbjct: 86 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 145 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 SS A + F + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 146 ELYSSNALVPPPFGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARV 205 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 206 TLATSVARTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTALGNIAT 265 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 266 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSPGGGVALPDNLPADLVSR 322 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L + ++F G+ FG Sbjct: 323 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGF---DAF-GWGRFLNFASRQAQFG 378 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + Q Sbjct: 379 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQ 438 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 439 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 495 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 496 ALGGGFD 502 >gi|170700017|ref|ZP_02891042.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] gi|170135076|gb|EDT03379.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria IOP40-10] Length = 498 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/427 (21%), Positives = 188/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ AL+ + +I QA RI A I S R++L P + AS S Sbjct: 62 ALDWANQFGDPQLPKLIDEALEGSPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W +DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSSNALFPPPYGGQWYSENNALASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLAASVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 242 TQASLSDLDGQITTMRYQLAALLGKGPDRGL---QIAAPVMSPAGDVALPGNLPADLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRAVDRQMDDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|115351440|ref|YP_773279.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115281428|gb|ABI86945.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 498 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/427 (21%), Positives = 188/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ AL+ + +I QA RI A I S R++L P + AS S Sbjct: 62 ALDWANQFGDPQLPKLIDEALEGSPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W +DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSSNALFPPPYGGQWYSENNALASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLAASVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 242 TQASLSDLDGQITTVRYQLAALLGKGPDRGL---QIAAPVLSPAGDVALPGNLPADLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRAVDRQMDDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|239993567|ref|ZP_04714091.1| putative outer membrane efflux protein [Alteromonas macleodii ATCC 27126] Length = 469 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 102/439 (23%), Positives = 202/439 (46%), Gaps = 39/439 (8%) Query: 5 RAIFSLF--IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 R++ F IVL A C P T P Q S + + T WW+ F L Sbjct: 13 RSLLCAFSCIVLTASCAYSPSTTLPETDTQALQ--KAKSVDATSQITTSWWKVFEVAELA 70 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-----NST 117 ++K QNLT+ QA +R+ A+ + A P+ A S R +L + +++ Sbjct: 71 PVMKKLESQNLTLNQAEQRVKRAQFLLAQANAGDVPTITARTSGRSGRDLDSGRSSHSTS 130 Query: 118 GQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L + D++G R + S +D+A Q A L+ + I + ++ + R+SI Sbjct: 131 GGLGLSYDADIWGTRDAQQRSRQLGIDTAQYQFTDALLDTQALFINTLLEQISLQSRLSI 190 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A Q +++ + + L ++F +G TS + + + + S +S++ L S +N ++ L Sbjct: 191 AMQNVEISEALLNLVQIRFEEGDTSGIEVSQQRNTLISAQSEVLRLSNSLTLNERALAVL 250 Query: 237 LGYPATEFLHYMQK-----QSNNFQPNLYIPINIGIPADLIRNRPDI-----RYQEKKLA 286 LG + +F QK +F PI + A++++ RPD+ ++++ LA Sbjct: 251 LGNESMQFNTLEQKALLSLSLTDFSLPEVAPI---LSAEVLKQRPDVQLAIAQFKQADLA 307 Query: 287 ---DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL--YLPIFDKGKIK 341 SVA + P +SL+ I ++ W+ + +FD G+++ Sbjct: 308 FYEASVAGL--------PGMSLSADIGVSD---LLDLAQGWTLSAAISSAATLFDGGRLE 356 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A++ + +Q+TVL+AI+ + N+ T++ +++ ++E +++ L+ Sbjct: 357 AAENAAKTDVDLAILQYQQTVLSAIEALLNSQTNLVFNQQNYRYALASLENNQQLYRLAD 416 Query: 402 INYRQGRYSLLDILDIERA 420 I Y+ G L++L+ +R+ Sbjct: 417 IRYKAGDTDFLNLLNAQRS 435 >gi|157738421|ref|YP_001491105.1| outer membrane efflux lipoprotein [Arcobacter butzleri RM4018] gi|157700275|gb|ABV68435.1| outer membrane efflux lipoprotein [Arcobacter butzleri RM4018] Length = 462 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 116/440 (26%), Positives = 213/440 (48%), Gaps = 46/440 (10%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESF--NDT 59 +L + S+FI +GC++ PE + + ++PT+ KN N++ ++ WE+F ND Sbjct: 4 LLFILISIFI--FSGCSLKPE-IEYNDSVIPTELKNSLDKN-SNLEYMQPNWENFVKND- 58 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS--- 116 L +L+KIAL+ N + A I +A+ +A FPS A S+ ++ +N+ Sbjct: 59 KLKELIKIALENNKDLKIAILNIESARATYRVEKAKYFPSIDAKASNTNARDVTSNNNTE 118 Query: 117 -----TGQLDSDWKIDLFGQRRHIESSL--ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + + +++DLFG+ R + S + L + YA K+++IS++I ++ Sbjct: 119 TSRTYSAKFGASYELDLFGKTRSLNDSALESYLATKYAATS-TKISLISEIINTWNTLSS 177 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGA-------TSKLSLVKLEAEIKSIESDIPTL 222 E + I + K + +L+ KF G +SK SL + E + + ++ + Sbjct: 178 NIEHLKILEDSIANLKLSTQLTQKKFDMGIILIDDVLSSKTSLKEAEVTLLNYKT---VV 234 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 EK+ M +ST + P + N+ + I GI + ++ +RPDI E Sbjct: 235 EKNKNMLELLVSTTI--PENLLPTSFKDTENSL-----MLIQAGISSKVLYSRPDIIQAE 287 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYN-THWSFGPKLYLPIFDKG 338 L A IG A++ +PS++L L ++ F G N T WSF P + LPIF G Sbjct: 288 YNLKAKNANIGAARAAFFPSITLTADYGLASNSLSSLFSGNNQTVWSFIPSINLPIFKGG 347 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKK 395 + +N+ A + + +++T+ A K+V +AL +INE + + V KK Sbjct: 348 ENIANLDYANAQQKIALAQYEKTIQTAFKDVSDALVERANINEQ---LNAQEDLVNTAKK 404 Query: 396 SMSLSMINYRQGRYSLLDIL 415 S +++ +Y+ G + L++L Sbjct: 405 SYEVALNSYKYGIGNYLNVL 424 >gi|167562933|ref|ZP_02355849.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 498 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/427 (21%), Positives = 185/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--- 105 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPQADAKYSWTR 117 Query: 106 -----HRFIP-----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 + +P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSGNALVPPPFGGQWYSENNALASASWELDLWGKNRARLHAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVSRTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGLRIA---APVLSPGAAVALPENLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 295 RPDIVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGKFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + + ++NA+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQALINALNDVATQVASIRSIDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ V +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLVAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|260220828|emb|CBA28784.1| hypothetical protein Csp_A08870 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 219 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 12/199 (6%) Query: 262 PINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY 320 P+ I +PA + RPD+ E+ + + A++G AK+ YP L+L+GS+ +S G Sbjct: 8 PVFIASVPAQTLTQRPDVFAAERDVIVASAQVGSAKAQRYPRLTLSGSVGALRYSSM-GR 66 Query: 321 NTH---WSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 T+ WSFGP + LP+FD G+ K+N+ AE++ + ++ V A++EVE AL ++ Sbjct: 67 ETNLDTWSFGPLAVTLPLFDGGQRKANVVSAEAAYAQSVSVYRGKVRQAVREVEEALVNL 126 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKR 433 A + +S++ + Y QG SL+++ D R A ++ L + + Sbjct: 127 QSTDARKQDAAVATAGYAESLAATQARYGQGLASLVELEDARRNALAAESAQLSLGLERN 186 Query: 434 QLAKSYVDLYIAIGSGYNP 452 +++V LY A+G G+ P Sbjct: 187 ---RAWVSLYRALGGGFEP 202 >gi|254523183|ref|ZP_05135238.1| transcriptional regulator, Fis family [Stenotrophomonas sp. SKA14] gi|219720774|gb|EED39299.1| transcriptional regulator, Fis family [Stenotrophomonas sp. SKA14] Length = 457 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 101/462 (21%), Positives = 188/462 (40%), Gaps = 53/462 (11%) Query: 17 GCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC P P P TQ G + +D +WW+ D +L+ LV A+ NL + Sbjct: 15 GCMSVPVPDLPDRTPSAWTQVPQGQG---VAVDARQWWKVLADPALDGLVDQAIAGNLDL 71 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-------------GQLDS 122 QAT R+ A + I++ +D RF+P + ++ +++ Sbjct: 72 RQATLRLQAVR--IVAGTSD----------SRFLPEISASAKQVQDAAAVDTYFHAGIEA 119 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYID--ARHFKERISIAHQ 179 W + LFG + S+ A+ +A A A++ VI+ ++ SY+D ++ + Q Sbjct: 120 IWDLGLFGAAESAQLSAQASAGNAEALRSAAQVAVIADVVRSYLDLTVAQAQQDLLARQQ 179 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 +D + + L + +L ++ + + + Sbjct: 180 AVDDRGEQLALVRQRLRLDEPGELDRLRARQAATRAATAQASENAGNAARALALLLGRDG 239 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIG------IPADLIRNRPDIRYQEKKLADSVAKIG 293 P + Y P +G +PADL+R+RP I E ++ + A G Sbjct: 240 PDPAWRAY------------RTPPKLGAFSLQQVPADLLRHRPQILLAESEVMQAAASKG 287 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ +YP +SL GSI ++ N+ ++ S GP + +P++D G+ ++ E Sbjct: 288 SARAAMYPRVSLGGSILYAYNLTQNARSNSDSSPSIGPYIDIPLWDWGQRRARFHADEKQ 347 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +++ VL + EVE AL S+ L+ A ++ + + + G S Sbjct: 348 LDAALLGYRKAVLEGVSEVEGALGSLARQDSSQQSLRVANDVALQQVKRQARQVQLGLSS 407 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + LD +RA + DL A+ ++ LY A+G P Sbjct: 408 EFEGLDSQRAALSSQADLIGAQGARVLAFASLYRALGGAPLP 449 >gi|257092955|ref|YP_003166596.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045479|gb|ACV34667.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 666 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 96/429 (22%), Positives = 187/429 (43%), Gaps = 37/429 (8%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERI----------NAAKENILSVRADLFPS 99 + WW F + L LV L N + A RI N A+ LS + Sbjct: 92 VDWWRDFGNRELQALVDRGLANNPDVRIALNRIVQAKARADQANGARYPALSAPLTIAEQ 151 Query: 100 SYASISHRFIPNLKTNSTG-----------QLDSDWKIDLFGQRRHIESSLANLD---SA 145 + + P +S G + +DW++D++G++ + S AN + Sbjct: 152 APGGTTVGTAPAGSVSSAGGRNTSQKTFQASIRADWRLDIWGEQSALADS-ANFQLWRAV 210 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 Y + ++ + N+ L SY++ +R+ IA + D+ + + G + L Sbjct: 211 YERENVQR-NLAGSLAASYVEFLSLNDRLRIAMETEDVLSATLASIEKRVKVGDATLSEL 269 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-I 263 + A I ++ + IPTLE+ + I+ L+ P L S++ +L IP + Sbjct: 270 EQQRAAIFAVRASIPTLEQQRFDALAAIAFLVATVPGNLTL------SDDGLDSLAIPGV 323 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGY 320 G+P+ L+ RPD+R E +L + A + +A++ + P + L+ I + F Sbjct: 324 AAGVPSSLLLRRPDVRAAEAQLLAADADVAVARARILPPMDLSAQIGYSSVALSQLFVPR 383 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 WS L + IFD G+ ++ +++ +E ++ TV A+KE E AL ++ + Sbjct: 384 ALFWSVVDSLTVSIFDGGRKRNEQVFSQAVQEEMVESYARTVYRAMKEAETALAAVRLSE 443 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + + + A + +++ +S Y G L +L+ +R+ + D + +L + Y+ Sbjct: 444 RRLAAQREASQAARRAWEISTRVYAVGGIDYLSLLETQRSYHRYLDDYQKGRMELFRGYI 503 Query: 441 DLYIAIGSG 449 L+ A+G G Sbjct: 504 SLFQALGGG 512 >gi|107029079|ref|YP_626174.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116689762|ref|YP_835385.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105898243|gb|ABF81201.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116647851|gb|ABK08492.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 522 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 186/422 (44%), Gaps = 55/422 (13%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTL------------ 50 +A+ +L + LAG G + P P +P+ G + + + Sbjct: 10 KAVRALTVASLAGPLAGCAWFAPSGEPPAMPSPAHYGAAPQVEQTVSAHGVAQQFEVGAQ 69 Query: 51 ---KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---S 103 WW+ + +LN LV L+ + T+ A+ ++AA+E + + + + PS A + Sbjct: 70 PVPDWWKQYRSDALNALVDEGLRNSPTLSAASHSLDAAREQLRGQIGSSMLPSIDAGGQA 129 Query: 104 ISHRF----IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIA 152 R IP L + GQL + + +DLFG R +LA +D + Q++ A Sbjct: 130 TRQRALGVPIPALGAPTLLYDTFVGQLQASYTVDLFGVSRFANRALAKRVDVSAFQLESA 189 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + + ++ + I +I +++ L + + G+ S+ + Sbjct: 190 RRALAANIVTASITVSVLNAQIDTTERLVALANDQAHDAERRHALGSASRSDALNARQSA 249 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGY-----PATEFLHYMQKQSNNFQPNLYIP--INI 265 + + +P L + H ++ L+G PA L +L++P + + Sbjct: 250 DTFAASLPALRQQRDSARHALAVLVGRTPDRPPADLALT-----------DLHLPEQVPV 298 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYN 321 +P+DL+++RPDI+ + L + A++G+A + ++P LSL+ ++ S+P G Sbjct: 299 VVPSDLLQSRPDIQAADAGLKAAAAEVGLATAQMFPQLSLSAAMG-KGGFSWPAMLSGAG 357 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 W+ G L PIF G + + R A+++ + +++ VL A + V ++L ++ D + Sbjct: 358 AIWNVGASLSQPIFHGGALLAQRRAAKATYEAAVDQYKQAVLGAFQNVADSLAALEHDAE 417 Query: 382 IV 383 + Sbjct: 418 AL 419 >gi|221197712|ref|ZP_03570758.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221204730|ref|ZP_03577747.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221175587|gb|EEE08017.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221181644|gb|EEE14045.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 546 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 96/441 (21%), Positives = 194/441 (43%), Gaps = 55/441 (12%) Query: 13 VLLAGC-TVG---PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +++AGC ++G P+ T+ L +I + WW ++ D L+ + A Sbjct: 19 LIMAGCASMGDNKPQSTRIDASALDAGAAIRAADRDAGWPASDWWRAYGDPQLDAWIAAA 78 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL-----------KT 114 N T+ A R+ A+ R+ P ++S + N+ Sbjct: 79 QAGNPTLAAAQARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLADTDTW 138 Query: 115 NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 N+TG L + +DL+G+ ++ E +L + A AKL + ++ +Y+ Sbjct: 139 NNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVG------- 191 Query: 174 ISIAHQILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +S+ + +LDL ++ E L+H + G ++L + + E+ + E I T E++ Sbjct: 192 MSMNYALLDLARETFERQRALADLAHKRLQAGIGTQLEVSQAESTLPDYERQIDTYEEAI 251 Query: 227 RMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRY 280 ++ H ++ L G A + + +P L + G+P ADL+ RPD+ Sbjct: 252 QLARHQLAALAGKGPGAGDAIR---------RPKLSLDAPAGLPSALPADLLGRRPDV-V 301 Query: 281 QEKKLADSVAK-IGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKLYLPI 334 + + D+ A+ I +AK+ YP++ L G +T + N W+ GP L LPI Sbjct: 302 AARWMVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPI 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F+ G++++ + A + + +T++ A+K++ + + I +V ++ Sbjct: 362 FEGGRLRAQLGAANAGYDRAVEHYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANE 421 Query: 395 KSMSLSMINYRQGRYSLLDIL 415 +S LS +R+G +++L Sbjct: 422 RSYRLSREGFRRGLTDYVNVL 442 >gi|187478680|ref|YP_786704.1| outer membrane multidrug efflux protein [Bordetella avium 197N] gi|115423266|emb|CAJ49799.1| outer membrane multidrug efflux protein [Bordetella avium 197N] Length = 474 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/475 (20%), Positives = 211/475 (44%), Gaps = 47/475 (9%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 R + + ++ LAGC + KP L P Q + +++ +WW+ + D LN+L Sbjct: 3 RLLSTTLVLALAGCALMEPAPKPVATLTPAQLGLNDAQTAW--PATQWWQGYGDPQLNRL 60 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFI------PN 111 V +AL + ++ A R+ A + RA L P S +S +I + Sbjct: 61 VDLALANSPSLTAAQARLAQANAAVAGARAPLMPRVDANYSLSREHLSGNYIYPAPLGGS 120 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP-SYIDARHF 170 + +N+ LD +++D +G+ R + + A A N++++ + +Y++ ++ Sbjct: 121 VASNNRLALDFSYELDFWGKNRSRLKAAVSQRDAAQADTQAARNLLARSVARAYLNLQNA 180 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + ++ +I+ ++ +L+ + G +++ + + E+ + D+ +E + Sbjct: 181 FAQQAVIQRIIAQREQVQKLTQSRKQAGLDTEVEVKQAESATAAARVDLTQVETTLAQLR 240 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------IPADLIRNRPDIRYQ 281 + ++ L S+ Q P+ + +P +L+ +RPD+ Sbjct: 241 NQLAALTA-------------SSPAQMQALTPVRLSSASGVLPKSLPLELLGHRPDVVAA 287 Query: 282 EKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + + +I AK++ YP++ + G AL + ++ GP + LPIF G Sbjct: 288 RWRAEAARQQIESAKAEFYPNVNIVAFAGVQALGTNMLLDSFSRTAGIGPAISLPIFHGG 347 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ +N+ + A + +TVL A+++V +A+ ++ + T+ + A E + + Sbjct: 348 ELNANLAGRRADADLAVSDYNQTVLGAVQQVADAIDALRLIDREKTERKQAHEAIEAAYE 407 Query: 399 LSMINYRQGRYSLLDIL---DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L++ YR G + L +L D A A+++ DL QL DL A+G GY Sbjct: 408 LALKRYRNGLGNYLSVLIAQDGVLAQARLQTDLQYRAYQLD---ADLAYALGGGY 459 >gi|256422354|ref|YP_003123007.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Chitinophaga pinensis DSM 2588] gi|256037262|gb|ACU60806.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Chitinophaga pinensis DSM 2588] Length = 1530 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 103/475 (21%), Positives = 205/475 (43%), Gaps = 43/475 (9%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFS--IGNSKNLINID-----TLKWWESFNDTSLNKLVK 66 LL GC + P P P FS + +S + D T+ + + F D+ L +L+ Sbjct: 1058 LLTGCYTPSKVIFPDAPQAPQAFSNPVNDSNKVATADSSSIATISYKQFFTDSLLQQLLD 1117 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------IPNLKTNS 116 AL+ N +L AT+R+ A+ +++ R P A +S + N TN Sbjct: 1118 TALRNNTDMLIATQRMETARAQLMAARRAWTPEVNAVVSAGVDRWGDYTLNGVGNYDTNL 1177 Query: 117 TGQLD-----------------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 + +D S W+IDL+G+ R ++++ S+ + +IS Sbjct: 1178 SPNIDDKQRIPGPTPDYFVGLRSSWEIDLWGKMRSRKKAAMLRFMSSEQGRQLISTQLIS 1237 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y + + + L + + ++ G + L++ + A++ + S Sbjct: 1238 QVAGMYYQLMVLDYEQQVILRNIALQESALATVQIQQEAGRATLLAVQQFNAQLLNTRSM 1297 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 L + + ++ LLG F +++ S L G+PA ++ RPDI Sbjct: 1298 SLGLRQQTLELENQLNALLG----RFPQSIKRDSALLTMPLPPFARTGVPAGMLALRPDI 1353 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG----PKLYLPI 334 R +L + A I AK+ PSL++ + L N+ +NT S L P+ Sbjct: 1354 RQAALELEAAKADIHAAKASFLPSLNITPYLGLNSFNAGTLFNTPASVAYGVLGGLSAPL 1413 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 ++ +++S ++ + +++ V+N +EV +AL I ++ T + VE+ K Sbjct: 1414 LNRQQLRSQYNITTAAGMTAFYDYRQRVINGYQEVISALGKIQNGQEAYTLKEAEVEMLK 1473 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +S + + Y G + L+++ +++ + E+ L+ K++L + LY A+G G Sbjct: 1474 NGVSTANVLYATGYANYLEVITAQKSVLEAELALAGNKKELLLGTITLYRALGGG 1528 >gi|299148059|ref|ZP_07041122.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] gi|298514242|gb|EFI38128.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 3_1_23] Length = 454 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 205/465 (44%), Gaps = 40/465 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+++ DT L W E F D L Sbjct: 6 ILSAATLILSSCGI---YNK-YKPVSEVPEGLYGSESVAATDTANFGNLSWREVFTDPYL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNST 117 LV AL +N + A R+ A+ +L+ + PS + ++S + Sbjct: 62 QNLVDSALLRNTDMQTAHLRVKEAEATLLTSKLSYLPSLFLAPEGAVSSFDRGKATQTYS 121 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K +++ + +Y + Sbjct: 122 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVASVANTYYTLLMLDSQ 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA +K+++ +H G ++ L + EA +I + + L++ +++ Sbjct: 179 YEIAVATEAAWKESVNATHAMKKAGMVNEAGLAQTEATYFNICTTVLDLKEQINQAENSL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL E H +Q+ N +P N +G+P ++ NRPD+R E LA + Sbjct: 239 ALLLA----ETPHKIQRGKLG---NQQLPENFSVGVPLQMLANRPDVRSAEFSLAQAFYT 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A Sbjct: 292 TNAARAAFYPSITLSGSAGWTNSAGSMIVNPG-KFLASAVASLTQPLFNKGANIAQLKIA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ +E +++++T+LNA EV AL + E K +++ KS SL M Sbjct: 351 KAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKADYYNKQVASLQTAAKSTSLLM--- 407 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L ++ ++ + + + LY A+G G Sbjct: 408 KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 452 >gi|53719584|ref|YP_108570.1| putative antibiotic resistance membrane protein [Burkholderia pseudomallei K96243] gi|52209998|emb|CAH35971.1| putative antibiotic resistance membrane protein [Burkholderia pseudomallei K96243] Length = 650 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 110/485 (22%), Positives = 217/485 (44%), Gaps = 53/485 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 6 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 65 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 66 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 125 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 126 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 185 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 186 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 245 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNR 275 + E++ ++ H ++ L G P ++ +P L + N +P A+L+ R Sbjct: 246 SYEEAIQLGRHQLAALAGKGPGA--------GASLARPKLALDANAALPSALPAELLGRR 297 Query: 276 PDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPK 329 PDI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP Sbjct: 298 PDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKL 386 L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 357 LTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR- 415 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYI 444 AV L ++S LS + +G +++L + TA+ E I +LA ++ L + Sbjct: 416 --AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMV 471 Query: 445 AIGSG 449 A+G G Sbjct: 472 ALGGG 476 >gi|172060479|ref|YP_001808131.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171992996|gb|ACB63915.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 498 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/427 (21%), Positives = 188/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ AL+ + +I QA RI A I S R++L P + AS S Sbjct: 62 ALDWANQFGDPQLPKLIDEALEGSPSIAQAQARIAKASSYIESSRSNLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W +DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSSNALFPPPYGGQWYSENNALASASWDLDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLAASVARTYNSLAQLYALRDIAQREITNRQTVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 242 TQASLSDLDGQITTVRYQLAALLGKGPDRGL---QIAAPVMSPAGDVALPGNLPADLVSR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRAVDRQMDDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|296161599|ref|ZP_06844403.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295888076|gb|EFG67890.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 501 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/426 (20%), Positives = 196/426 (46%), Gaps = 37/426 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW +ND L+ LV+ A + N + +RI+AA+ AD P AS S R+ Sbjct: 68 WWRQWNDPQLDTLVQDATEGNPGLRAVEQRIDAARFQAQIAGADELPQLEASGSFERRRY 127 Query: 109 I-------PNLKT--NSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 P T ++T Q D + +DL+G+ R + E +L N+ +A A A++ + + Sbjct: 128 ARYTTPAPPGGTTVWSNTIQADLSYDLDLWGKSRALREGALDNVHAAAADARFAEIELQT 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLY-------KKNIELSHLKFTQGATSKLSLVKLEAE 211 ++ SY+ ++++ + +LD+Y ++ ++++ ++ G S L + + + + Sbjct: 188 AVVRSYV-------QLALEYALLDVYHAVQAEQQRTLDIATRRWRAGVGSGLEVSQAQTQ 240 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + ++ + I+ L G + +++ + +P ++ PA+L Sbjct: 241 LAMSTTRVRQAQQQLALERIGIAGLAGK-GPGYGDALRRPGLALNVPVVLPASL--PAEL 297 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-------NTHW 324 I +R D+ ++ ++ I A ++ YP ++L S +L +F G+ Sbjct: 298 IGHRADVVAGRWRVLEADKGIDAAHANFYPDINLLASASLGSAATFGGFFNFVNSDGVGH 357 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 G + LPIFD G+ + + A +S + ++V+NA++ V + S+ ++ Sbjct: 358 GVGAAISLPIFDGGRRRGHYGVAVASRDAAVDAYNQSVVNAMQGVATQVVSLRSLEQQQA 417 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ ++ +KS L+ YR G +++L + A + E L+ + + ++ L Sbjct: 418 SIETTLDSARKSFQLADTGYRSGITEFINVLAAQAAQLEQEESLAAVQARRLDAWALLMK 477 Query: 445 AIGSGY 450 +G G+ Sbjct: 478 ELGGGF 483 >gi|254250699|ref|ZP_04944018.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124879833|gb|EAY67189.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 390 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 11/334 (3%) Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DL+G+ R + NL A A D +L V +++ Y+ R+ + + + + Sbjct: 45 YEVDLWGRLRGDADVGEQNLLQAAADRDAVRLRVATEVAVDYLTLRYVDDDLVTLTRAIG 104 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN-VHNISTLLGYPA 241 L + +++ + GA S L ++ A++ + +D+ + R N V I+ L G Sbjct: 105 LRRTALDVIAARVRAGAASDLDGLRAAADLDTAYADLAE-SRRLRENLVDAIAVLTGVSP 163 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 T F P + G+P+ L+ RPD+ ++ + ++GIA++ P Sbjct: 164 TAF-----DVGTGAVPVQVPEVPAGLPSALLAQRPDVFAAARRADAASLELGIARTAWLP 218 Query: 302 SLSL--NGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +L+L +G A SF N+ WS G + L +FD GK + + A + + Sbjct: 219 TLTLTADGGFATRDLRSFLDRNSSLWSLGANVALTLFDGGKRDAAVAAARAGTNVADADY 278 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + T + A+++V++AL I K+ + + A + LS+ Y G S L+++D + Sbjct: 279 RATAIGALRDVQDALNDIAAQKERIVRYDSAARTTDAAARLSLSRYAHGYVSYLEVIDAD 338 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R L +++ LA + V L A+G G+ P Sbjct: 339 RDALNARRQLIHSRQALAVATVSLVRALGGGWTP 372 >gi|311104141|ref|YP_003976994.1| efflux transporter outer membrane factor lipoprotein 1 [Achromobacter xylosoxidans A8] gi|310758830|gb|ADP14279.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 1 [Achromobacter xylosoxidans A8] Length = 478 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/428 (23%), Positives = 192/428 (44%), Gaps = 31/428 (7%) Query: 26 KPHMPLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI 82 +P + P +S G+++ D +WW +F+D +LN LV AL +N + A R+ Sbjct: 31 EPPLTSTPAAWSHAPAGSAQPEPLADGGEWWRNFSDPTLNGLVDAALARNNDLAAAAIRV 90 Query: 83 NAAKENILSVRADLFPSSYASISHRFIPNL-------KTNSTGQLDSDWKIDLFGQRRHI 135 A+ L P S NL +TN+ QL +++DL+G + Sbjct: 91 RRAQYQAGITEDKLLPQLGGSADVTRNRNLYGDRAISRTNA-AQLTVSYEVDLWG-KLSS 148 Query: 136 ESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + A D+ + D A L+++ Y +RI+ + + + +K +L Sbjct: 149 QRDAAQWDALATEQDRQSAALSLVGTTATLYWQTAFINQRIASSAESIAYARKTQDLVRA 208 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 ++ G S L + + E + S E+ L + + ++ L P + + Sbjct: 209 QYAAGGASALEMAEAEQTVASQEAAHALLVQQRVEYANALAILFDGPPDRMMADPARL-- 266 Query: 254 NFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 P +P G+PA+L+ RPD+R E +L S++ + ++ YP L+L G++ Sbjct: 267 ---PQYPLPQARAGVPAELLGRRPDLRAAELRLRQSLSTVDATRASFYPPLTLTGALG-- 321 Query: 313 HDNSFPGY-----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 +S P N S G L LP +++ NI+ +++ +E+ + +++ + A+ Sbjct: 322 --SSSPTLSDVLKNPVGSLGAALTLPFLQWNQMQLNIKISKADYEERVVNFRQALYQAMA 379 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE--RATAKVE 425 +VENAL++ + + +L +++ +++ L + YR G L D LD + R A+V Sbjct: 380 DVENALSNRTQLRLQGEQLDASLKAAREAERLYEVRYRAGAVPLKDWLDAQEKRRVAEVS 439 Query: 426 VDLSIAKR 433 D ++ R Sbjct: 440 RDENMLNR 447 >gi|295132171|ref|YP_003582847.1| OprM-like outer membrane efflux protein [Zunongwangia profunda SM-A87] gi|294980186|gb|ADF50651.1| OprM-like outer membrane efflux protein [Zunongwangia profunda SM-A87] Length = 465 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 107/473 (22%), Positives = 209/473 (44%), Gaps = 50/473 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 SL ++ L C V +Y +P + + ++ + + + W + F D L ++ Sbjct: 12 LSLVVLSLQSCFVAKDYEQPDIIEEENFRTDSIPQDSLTMANVSWRDMFTDPILQNHIEE 71 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKTNST-GQL---- 120 LQ N+ I A ++I A+ + +A FPS AS++ + L +NS G Sbjct: 72 GLQNNIDIRVALQQILYAEAYLKQGKAGYFPSITGNASVTRQ---ELSSNSQFGGFFSSL 128 Query: 121 -------DSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W+ D++G Q+R E+S +A+ V K +IS + +Y Sbjct: 129 DQYEISADLSWEADIWGKIRSQKRAYEASYLQSVAAHQAV---KTTLISNIASTYYQLLS 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E+ + + ++ +K++E + G +++ + + EA++ + ++ + + R+ Sbjct: 186 LDEQRKVTERTIENREKSLETNKALKEAGNITEVGVKQTEAQLYTAQALLVDINNQIRLL 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +S LLG + +S + + G+PA L+RNRPD+ E L ++ Sbjct: 246 ENTMSILLGKEPQDI-----NRSVLADQTIETELKTGVPAQLLRNRPDVIQAEYGLVNAF 300 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP---KLYLPIFDKGKIKSNIRR 346 +A+++ YPSL+L + + +T+ F + PIF + +IK+ Sbjct: 301 EMTNVARANFYPSLTLTATGGFQSLDLGELIDTNSLFATIVGGITQPIFQRRQIKTQYEA 360 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHKKSMSL--SMI 402 +++ ++ + +++ L A KEV +AL + DK +E+ +K S + Sbjct: 361 SQAQQEQARLQFRQAFLTATKEVADALYNYEAASDK---------IEIKEKEYSAYETAT 411 Query: 403 NYRQ-----GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 NY Q G + L++L +DL AK S V+LY A+G G+ Sbjct: 412 NYSQELLDNGLANYLEVLTARENALNSRLDLINAKYSQLNSMVNLYQALGGGW 464 >gi|91224238|ref|ZP_01259501.1| putative efflux pump channel protein [Vibrio alginolyticus 12G01] gi|91191149|gb|EAS77415.1| putative efflux pump channel protein [Vibrio alginolyticus 12G01] Length = 458 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 208/454 (45%), Gaps = 28/454 (6%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + + +++D WW +FND +LN+ + Sbjct: 11 ALSAVWLSGCGSLMRSDYQAPEVQV-PANWQQMHVAGDVSMD--PWWLAFNDPTLNQYIT 67 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S + +L + + L Sbjct: 68 QVLAQNNDLTLATLTLKKARLQLGLAQDDLFPTLSSSTSGQVQKSLDSGESADSYSTNLS 127 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++++DL+G + + A + +Q D ++++ Y + K+R++++ + Sbjct: 128 VNYELDLWG-KISADVDQAKWTAMASQQDREATAQSLVATTASLYWQIGYLKQRLNLSQR 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ + ++L ++ GA +L +++ + + S+++ E+S + + L Sbjct: 187 NVEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQ 246 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P +Q P+L ++G P+DL+ RPDI+ + ++A A D Sbjct: 247 PPKSISANIQMLPEGDMPSL----SVGAPSDLLIRRPDIKAAIYDVKAALANKDAADLDY 302 Query: 300 YPSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 303 LPKLTLTGALGGSSQALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQS 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 358 AIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMD 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ + T + L + + V LY ++G Sbjct: 418 YLNAQEDTRNAQASLLENRYNQFLTQVTLYQSLG 451 >gi|319952120|ref|YP_004163387.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] gi|319420780|gb|ADV47889.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] Length = 483 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 103/479 (21%), Positives = 214/479 (44%), Gaps = 40/479 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYT-KPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ F FI L+ P T + +P Q++ S + +N +KW E F+D L Sbjct: 13 KSSFVGFIALMTVYACVPTRTVREENKSVPEQYA-NQSSDTVNTAKMKWKEFFSDPYLVS 71 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP----------------SSYASISHR 107 L+ AL N + +R++ +K I + + + P + ++ Sbjct: 72 LIDTALVHNQELNIMLQRVDMSKNEIKARKGEYLPFVNYFGGAEVEKVGEYTRNGAVEKN 131 Query: 108 F-------IPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 P TN + L + W+ID++ + R+ + S++ S + ++S+ Sbjct: 132 LDIREGEEFPEPLTNYSFGLTASWEIDVWKKLRNAKKSAVFEYLSTVEGKNFMVTTIVSE 191 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + SY + +++I Q L++ + +++ L+ ++L++ K EAE+ +S Sbjct: 192 IANSYYELLAVDSQLAIIDQNLEIQENALKMVKLQKQAARATELAVKKFEAEVLKNKSHR 251 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L++ + I+ L+G + + + S +F + G+P+ L+ NR D+R Sbjct: 252 FELKQQIVEMENKINFLVGRTPQK----VARNSEDFIKGSVDAMYAGVPSQLLLNRTDVR 307 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY-NTH-----WSFGPKLYL 332 E +L + I +AK++ YPS + S+ L +F P Y NT +S + Sbjct: 308 QAELELEAAKLNISVAKANFYPSFDITTSVGL---EAFKPKYLNTTPESLLYSVVGDVVG 364 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ ++ IK+ + A + +++ +LNA EV N L++I+ KK V+ Sbjct: 365 PLINRNAIKAAYKNANDKQIQAVFEYEKAILNAYIEVSNELSNIDNLKKSFDLKVGQVDA 424 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S+ +S+ ++ R +++L +R + ++L K+ + +Y A+G G+N Sbjct: 425 LTESIDISIRLFQSARADYMEVLLTQRDALEATIELIETKKDQMIAQTAMYKALGGGWN 483 >gi|257139306|ref|ZP_05587568.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 499 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------- 98 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 117 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 SS A + F + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSSNALVPPPFGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTALGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSPGGGVALPDNLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L + ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|167582081|ref|ZP_02374955.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 497 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------- 98 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 117 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 SS A + F + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSSNALVPPPFGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTALGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSPGGGVALPDNLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L + ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|76812230|ref|YP_333255.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 1710b] gi|254259398|ref|ZP_04950452.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 1710a] gi|76581683|gb|ABA51158.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 1710b] gi|254218087|gb|EET07471.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 1710a] Length = 615 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 51/484 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIA 445 AV L ++S LS + +G +++L + TA+ E I +LA ++ L +A Sbjct: 411 -AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMVA 467 Query: 446 IGSG 449 +G G Sbjct: 468 LGGG 471 >gi|298377365|ref|ZP_06987318.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] gi|298265779|gb|EFI07439.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] Length = 480 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 115/476 (24%), Positives = 203/476 (42%), Gaps = 45/476 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L ++ LAGC PE LP +G + + L W F DT L V +A Sbjct: 14 ALALIALAGCKT-PELLMDERISLPESGEMGMNDTTF-VKPLSWDVFFQDTLLRGYVDVA 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLKTNSTG 118 L+ N + Q+ ERI ++ + + L P +I +RF + N +TN Sbjct: 72 LRNNHSFQQSMERIAMSRAALQRAKGLLLPDVNLNIGASVNRFGEYTMDGVGNSETNVPS 131 Query: 119 ----------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 L W+ D++G+ R +++ A ++ A+ +IS L Sbjct: 132 LPKDKHIPDPYRDFGLSLSFQWEADIWGKLTRKKQAAAARWMASVEATRFAQSMLISDLA 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y + R + L +++ EL+ +GA ++L++ + A + IES + Sbjct: 192 IQYYELIGLDRRKEVLRNALASARRSHELTRQLKKEGAETQLAVDQFYARVLLIESKLLE 251 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ LLG F +++ + L +P++ GIPA+L+ RPD+R Sbjct: 252 NDQLIGEKERAIACLLGV----FPFEIRRMGFDELRKLPVPLSEGIPANLLTLRPDVRSA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPI 334 E L S A + AK+ YPSL L S N+F G H + + PI Sbjct: 308 EMGLVASKADVIAAKAAFYPSLVLGASGGF---NAFDVGKWFHSPASLVYDLAAGITAPI 364 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F + +I+S A++S + + ET LNA EV + S + ++I K + ++ H Sbjct: 365 FRRNEIRSMWNEAKASQRIALSQYHETALNAYTEVLDLYCASQTQTERIRLKEKESLA-H 423 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++S+ + ++ L++L E E++ L + + LY A+G G Sbjct: 424 QRSVVNAGEMFQLSYTGFLEVLSAEERYLDSELEHIDIVTDLCRKKILLYRALGGG 479 >gi|134282243|ref|ZP_01768948.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 305] gi|134246281|gb|EBA46370.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 305] Length = 625 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 104/483 (21%), Positives = 213/483 (44%), Gaps = 49/483 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNR 275 + E++ ++ H ++ L G P ++ +P L + N +P A+L+ R Sbjct: 273 SYEEAIQLGRHQLAALAGKGPGA--------GASLARPKLALDANAALPSALPAELLGRR 324 Query: 276 PDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPK 329 PDI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP Sbjct: 325 PDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPA 383 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKL 386 L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 384 LTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR- 442 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV L ++S LS + +G +++L + + + + + ++ L +A+ Sbjct: 443 --AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVAL 500 Query: 447 GSG 449 G G Sbjct: 501 GGG 503 >gi|333030264|ref|ZP_08458325.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides coprosuis DSM 18011] gi|332740861|gb|EGJ71343.1| RND efflux system, outer membrane lipoprotein, NodT family [Bacteroides coprosuis DSM 18011] Length = 474 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 105/479 (21%), Positives = 212/479 (44%), Gaps = 53/479 (11%) Query: 10 LFIVLLAG---CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 L ++ +AG C V Y P + + N + I + W E F DT L + Sbjct: 12 LGLIAIAGLQSCQVTNRYKSPELDT-KNLYREMNPSDSTTIADIPWSEYFKDTQLQGYIA 70 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------IPNLKTN 115 AL N +L A +RI A+ + RA FP S R +P + + Sbjct: 71 EALNNNYDMLMAEQRIKQAEAALGMARAAYFPELALSAQVNQTRLSSADPLTGMPQDRNS 130 Query: 116 --------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 S G L + W++D++G+ R + A++ ++YA + + ++IS + SY Sbjct: 131 LAYHSEKYSLG-LVASWELDIWGKLNRQSRAKYADMLNSYAGRTLIQTSLISSVANSYYS 189 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 E++ + +++ ++++ G + ++ + A + ++ + +P LE + Sbjct: 190 LLALDEQLKVTKEMITFMEESLVTMEAMKEGGMVTAAAVEQSRASLHNVRTTVPDLESAI 249 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKK 284 + +S +LG A ++++ + Q YIP ++ G+P ++ RPD++ E Sbjct: 250 YQLENALSVMLGRDA----GHIERSTIAAQ---YIPTSLASGVPVQMLSRRPDVQQAELT 302 Query: 285 LADSVAKIGIAKSDLYPSLSLN-GSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGK 339 + A++ YP+++L+ G I N+ F N + L PIF + K Sbjct: 303 FRAAFELKNAAQASFYPAITLSSGMIGYATTNTLSQFFKPENLIANLVGGLTQPIFARKK 362 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEV-------ENALTSINEDKKIVTKLQHAVEL 392 + + ++ A++ + +++ VL A KEV EN+L N D+ I V+ Sbjct: 363 LVTQLKVAKAEQKATLYAFEKAVLTAGKEVSDIMNVYENSLKK-NADRAI------EVDS 415 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +KSM + + G + L+++ ++ + +++ + K Q ++ +LY A+G G N Sbjct: 416 QRKSMEYTQELLKAGEATYLEVISAQQGLLQAQLNQTNDKLQQLQACTNLYRALGGGIN 474 >gi|126438904|ref|YP_001058719.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 668] gi|126218397|gb|ABN81903.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 668] Length = 594 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 51/484 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIA 445 AV L ++S LS + +G +++L + TA+ E I +LA ++ L +A Sbjct: 411 -AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMVA 467 Query: 446 IGSG 449 +G G Sbjct: 468 LGGG 471 >gi|167899421|ref|ZP_02486822.1| outer membrane lipoprotein [Burkholderia pseudomallei 7894] Length = 357 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 145/297 (48%), Gaps = 9/297 (3%) Query: 124 WKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 + +DL+G +RRH+E A D+ + A+L + + ++ + I + + I++ +++ Sbjct: 42 YALDLWGGERRHVEGLAAQADAQRHALAAARLTLAANVVNTMIARAAYADEIALTRELIA 101 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L + I L+ + + G ++ +++ L+A S+++ +P LE+ ++TL G YPA Sbjct: 102 LTDEQIRLTRAQVSAGTSAYTAVLALQAARASLDASLPALEQKTGEADDLLATLAGRYPA 161 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 ++ Q + L + +P++L+R RPDI E L + A IG+A + L+P Sbjct: 162 ----EHVPPQVSLAAIALPARLPRTVPSELVRRRPDILQAEAALHAASANIGVASAALFP 217 Query: 302 SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S++L+ S + F WS G + P+F G + + A + E + Sbjct: 218 SVTLSASGGFDATRASALFGPAGRAWSVGASITAPLFHGGALWYQRKAAVDAFDESNAAY 277 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++TVL+A +V + L +++ D + A+ + + L+ + Y G L +L Sbjct: 278 RQTVLSAFAQVADTLRALDHDATALDAQARAMSAARDARRLATVQYEAGTVGYLQVL 334 >gi|83592196|ref|YP_425948.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] gi|83575110|gb|ABC21661.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum rubrum ATCC 11170] Length = 490 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 105/438 (23%), Positives = 195/438 (44%), Gaps = 58/438 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINA-----------------AKENILSVR 93 +WW ++D LN+L+ AL N ++ A R+ +I+ R Sbjct: 56 EWWRGYHDAQLNQLIGEALAGNPSLKVAQARLRRAGALAGLAEAALSPHLDGGASIIDQR 115 Query: 94 ---ADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQV 149 L+P S A +KT + L+ + +DL+G R S+L L ++ Sbjct: 116 FNEGGLYPDSLAG-------KVKTENKIALEGAYTLDLWGGREAEYRSALGELRASEIDA 168 Query: 150 DIAKLNVISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 A+L++ + + SY A F +R I+H++L ++ L+ + G +++ + Sbjct: 169 QAARLDLAAAIAQSYARLAAAFDQR-DISHEVLRQKQEIQALTARQVRSGLVTEVETRQA 227 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 +A I + +DI E+ + +++ L G + + +P L + +G+P Sbjct: 228 DAAIAAARADIAGDEERISLLRRDLAVLTG-------AGPDRGAAITRPGLSMRAGVGLP 280 Query: 269 ----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPG 319 ADLI RPDI ++ + I AK+ YP++ L SI L + Sbjct: 281 STLPADLIGRRPDIVAHRWRIEAATRSIDAAKARFYPNVDLTAFLGFKSIGLAN------ 334 Query: 320 YNTHWSF----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + T SF GP + LPIFD G+++S + A ++ + VL A++++ +LTS Sbjct: 335 FMTAGSFMAGAGPAITLPIFDAGRLRSQLAEANATLDITVELYNGAVLEALRDIVGSLTS 394 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA-TAKVEVDLSIAKRQ 434 ++ + + AV +++ L+++ YR+G + L +L E A A+ + RQ Sbjct: 395 WRANQARLAEKSLAVASLEEAYRLALLRYREGLANYLTVLSAETALIAERRQEAEFRNRQ 454 Query: 435 LAKSYVDLYIAIGSGYNP 452 S + L A+G G+ P Sbjct: 455 YGLS-IALAHALGGGFAP 471 >gi|331006303|ref|ZP_08329618.1| efflux system protein [gamma proteobacterium IMCC1989] gi|330419885|gb|EGG94236.1| efflux system protein [gamma proteobacterium IMCC1989] Length = 492 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 86/422 (20%), Positives = 189/422 (44%), Gaps = 22/422 (5%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYAS 103 D WW+ F+D L+ LV + L+ + I A R++ A RADLFP+ A Sbjct: 74 DAEPWWQQFDDVVLHNLVTLTLENSKDIALAVARLDEAIATAGGSRADLFPTLNLDGQAG 133 Query: 104 ISHRFI--PNLKTNSTG------QLDSDWKIDLFGQRRHIESS-LANLDSAYAQVDIAKL 154 +S + L++N+T W+ D+FG+ R++ ++ L + ++V A+ Sbjct: 134 VSSTDLEEAGLQSNATRTNTHSINFALAWQADVFGRLRNLSAADKVRLQAQSSRVRDAQR 193 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ +++ +Y + R+ + + +N++ + QG + L + ++++ Sbjct: 194 VIVGQIVQNYYRLVSTRSRLGLTKSSVARRAENVDRINQLLIQGYATALDQSRADSQLYE 253 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIR 273 + + LE ++ I L G + +++ P+ P+ +I + L++ Sbjct: 254 ARALLAQLELEEVTLLNQIGLLAGTDGVNIRYVLKETGKLIVPDRSAPLPSISL---LVQ 310 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD----NSFPGYNT-HWSFGP 328 +RPD+R E+ L + + + + LYP+L ++ D +FP + Sbjct: 311 HRPDLRAVERDLVAAAYNLNASNAALYPTLGFRVNLGKGPDGGLTGAFPSLDVITGGILA 370 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L +PI +G++ + I + + Q+ + T++ T L + E++ A+ SI++++ I + Sbjct: 371 NLAMPILGRGRLLAAIDASSARLQQAHRTFESTALRVLSELDTAIISIDKNRTIYEQRVL 430 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 A K++ LS ++ G ++ E+ E A++ L +YV A+ Sbjct: 431 ASGSAKQAAELSKELFKAGELDYTSVILAEQTRVSSETSAITAQQALIVAYVTYLSAVAP 490 Query: 449 GY 450 + Sbjct: 491 AW 492 >gi|319943267|ref|ZP_08017550.1| outer membrane efflux protein [Lautropia mirabilis ATCC 51599] gi|319743809|gb|EFV96213.1| outer membrane efflux protein [Lautropia mirabilis ATCC 51599] Length = 602 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 99/450 (22%), Positives = 187/450 (41%), Gaps = 54/450 (12%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----------SSYAS 103 +F D L L++ NL+++QA R+ A+ + A P S S Sbjct: 150 AFQDPVLKDLLQRLQSGNLSMVQAEARLRQAQATLSGAGAARLPQVGVNVQGGRSGSKGS 209 Query: 104 ISHR------------------FIPNLKTNSTGQLDS-------DWKIDLFGQ-RRHIES 137 I+ R + L N G ++ W DL+G+ +ES Sbjct: 210 ITGRSSSGGNAGALSALGLDQDTLSQLGGNGKGATNNVQAGTTISWAPDLWGKVSAQVES 269 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 A + +A A A+L LI +Y R + ++ + + +++++L+ ++ Sbjct: 270 GRAAVQAAEANRRAAELQAQVSLIQAYWRMRLAEAQLILQARSEATSERSLQLTRNQYQA 329 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA----------TEFLHY 247 G ++ +V+ E ++S+ + LE+S H I+ LLG P T + Sbjct: 330 GLVTRADVVQAETSLQSVVTQRHALERSRDAERHAIAVLLGLPPSSLSAADLAPTAMANT 389 Query: 248 MQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + + P + +P IP DL+R RPD+R E+++A + A +G+A+ P L Sbjct: 390 VPGGKDASAPPVMLPAVPAIPETLSIDLLRRRPDVRVAERQVAAANADVGVARGAWLPDL 449 Query: 304 SLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 + + + L T N WS G +L +FD G + ++ E++ E+ ++ Sbjct: 450 TFSTTGTLSSATVANLLSSPLRSWSVGAQLAQTLFDGGTRNAALKTQEAAYDEKVAAYRL 509 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 VL A++E+E+ L S T Q V L +++ + Y+ G S ++ E Sbjct: 510 QVLTALQEIEDGLLSRRTLANQETDQQRLVSLAQEAERVVRNRYQGGVVSYAELASAEST 569 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L + +Y+ L A+G + Sbjct: 570 SLNAQSQLLSVQADRLNNYITLLAAVGGSW 599 >gi|300716366|ref|YP_003741169.1| RND efflux system, outer membrane lipoprotein [Erwinia billingiae Eb661] gi|299062202|emb|CAX59318.1| RND efflux system, outer membrane lipoprotein [Erwinia billingiae Eb661] Length = 464 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 114/461 (24%), Positives = 208/461 (45%), Gaps = 46/461 (9%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLN 62 R +F + L+GC++ PEY +P P + S L +D +L Sbjct: 7 FRTLFITTTLSLSGCSLAPEYQRPDSVADPVVELKAAQSSGRYRFQDLY----RDDPALL 62 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNST- 117 +++ AL N + A R+ + + LS DL PS + +IS + + TN T Sbjct: 63 AILENALINNFDLQLAMARVESTRAQKLSSLFDLIPSLNYTASKTISMNSVSSPLTNQTL 122 Query: 118 --------GQLDSD-WKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 G++ D W++DL+G++R+ I S ++ +S + V +L ++S L ++ +A Sbjct: 123 KQRSEQYQGRMGVDSWEVDLWGKKRNKIASMNSSEESHRSLVANVQLTLMSDLATAWYEA 182 Query: 168 RHFKERISIAH--QILDLYKKNIELSHLKFTQ-GATSKLSLVKLEAEIKSIESDIPTLEK 224 I + H QI + + IE ++ Q G + L K + + ES LE Sbjct: 183 HSM---IQVWHILQIKKIEMQRIEEKLMRINQQGRLKPIVLTKFQRGKGTDESTTHNLEV 239 Query: 225 SFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 +H + L G PA ++ S N P L I +D+I NRPD+ E Sbjct: 240 EILARIHQLEYLSGTVSPALNAENWQTIVSYNDAPQLMQAIR----SDIILNRPDVIAAE 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++ + IG A++ P +SL + T D Y +W+ P + +P+FD K Sbjct: 296 WQIKAANGNIGSARAAFLPGVSLFANAWRTSSSLDGIVDSYRDNWTLTPSVMIPVFDLPK 355 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++++ AE+ + I ++ T+ A+KE+++A ++ + + ++ EL +S++ Sbjct: 356 HYASLKYAETQQKMAIIDYRNTIAQALKEIKDATDALRLSQGNLAVVRE--ELKAQSVNF 413 Query: 400 SMINYR-----QGRYSLLDILDIERATAKVEVDLSIAKRQL 435 R Q Y+ + LDI + V+++L +KRQL Sbjct: 414 DNNKRRYEAGYQDLYTHYEALDI---FSNVQIELE-SKRQL 450 >gi|242314884|ref|ZP_04813900.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1106b] gi|242138123|gb|EES24525.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1106b] Length = 617 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|217423642|ref|ZP_03455143.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 576] gi|217393500|gb|EEC33521.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 576] Length = 659 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|254197866|ref|ZP_04904288.1| putative fusaric acid efflux protein [Burkholderia pseudomallei S13] gi|169654607|gb|EDS87300.1| putative fusaric acid efflux protein [Burkholderia pseudomallei S13] Length = 614 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|254180032|ref|ZP_04886631.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1655] gi|184210572|gb|EDU07615.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1655] Length = 579 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 51/484 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIA 445 AV L ++S LS + +G +++L + TA+ E I +LA ++ L +A Sbjct: 411 -AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMVA 467 Query: 446 IGSG 449 +G G Sbjct: 468 LGGG 471 >gi|126454776|ref|YP_001065971.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1106a] gi|126228418|gb|ABN91958.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 1106a] Length = 585 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 51/484 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIA 445 AV L ++S LS + +G +++L + TA+ E I +LA ++ L +A Sbjct: 411 -AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMVA 467 Query: 446 IGSG 449 +G G Sbjct: 468 LGGG 471 >gi|323530010|ref|YP_004232162.1| NodT family RND efflux system, outer membrane lipoprotein [Burkholderia sp. CCGE1001] gi|323387012|gb|ADX59102.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1001] Length = 487 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 195/438 (44%), Gaps = 49/438 (11%) Query: 7 IFSLFIVLL-AGCTVGPEYTKPHMPL----------LPTQFSIGNSKNLINIDTL--KWW 53 + ++F L + CT+GP P MP L T + G +++ T +WW Sbjct: 9 VIAVFAALATSACTLGPSGAPPAMPSPAHYGAQPQSLQTVAAGGTAQHFDAGATAAPQWW 68 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASISHR----- 107 + +L+ LV+ L+ N T+ + +NAA++ + + + A PS A Sbjct: 69 TLYRSDALDALVEEGLRNNPTLGATQKSLNAAQQELRAQIGASTLPSVDAGAEAERTRSP 128 Query: 108 FIPNLKTNS------TGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 +P + N+ GQL + + DLFG R+ ++S A +D +++ A+ + + + Sbjct: 129 VVPGIGPNTERYNVFAGQLQAQYNFDLFGAVRYGNKASAARVDVQAYELEAARRALAANI 188 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I A +I++ +++ L + G+ S + + ++ + +P Sbjct: 189 VGTAIRAAALDRQIALTERLVTLAGDTARDDAQRQALGSVSHAQALGSARQAAALAATLP 248 Query: 221 TLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIR 273 L + VH ++ LLG PA L +L +P + + +PA L+R Sbjct: 249 PLRQQRASTVHALAVLLGRTPDAAPAVPDLD-----------SLSLPEHVPVAVPAQLLR 297 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPK 329 +RPDI+ E + + A +G A + L+P+LSL S+ S+P G W+ G Sbjct: 298 SRPDIQAAEAAVQAAAADVGEATAQLFPNLSLTASMGRA-GFSWPALLSGAGGIWAIGAS 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + PIF G + ++ R + + + + ++ TVL+A V ++L +++ D + + + Sbjct: 357 VSQPIFHGGALLAHRRATKEAYEAAVLHYKSTVLSAFGNVADSLAALDNDAQTLASTESE 416 Query: 390 VELHKKSMSLSMINYRQG 407 ++ + YR G Sbjct: 417 ARAAQQLFDETTSRYRLG 434 >gi|255322319|ref|ZP_05363465.1| TolC protein [Campylobacter showae RM3277] gi|255300692|gb|EET79963.1| TolC protein [Campylobacter showae RM3277] Length = 447 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 196/405 (48%), Gaps = 16/405 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + + LN+L+ +AL+ N+ + ++ +N A ++ADL PS A++ Sbjct: 43 EWWTGYGEARLNELIGLALKNNIDLAKSAIAVNKALAQAGVLQADLVPSFNANLGAETGK 102 Query: 111 NLKTNST------GQLDSDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLI 161 N+KT + + ++IDL+ R+ S+ A + A A ++ A+L +I+ + Sbjct: 103 NIKTGGSWSESYKSGISLSYEIDLW--RKLANSTDAAMWEANATKYDLEAARLALINSVA 160 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y +A++ KE I++ + L Y++ + KF G +LSL ++++ + S ++ I Sbjct: 161 DAYFEAKYQKESINLYKKTLKNYEELEAIIKAKFELGKEEELSLKQVKSSVISAKNRILN 220 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 KS + LL EF + ++ P +N+ +P +I RPD++ Sbjct: 221 ASKSLDAVEKTLRNLLNVR-PEFDLNLGGNLSDISPQ---GVNLNVPLYVIGARPDLQAA 276 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKI 340 ++ +S+ ++ +++ YPS+++ + + D++ G ++ G + LP + K+ Sbjct: 277 ISRIKESLLEVKVSEKSFYPSITVGAGLGGSGDSASEGLKLNFLSGNIAINLPFLNYSKL 336 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 KS ++ +E + + + +T+ A+ E++ ++ +D+ ++ L + + Sbjct: 337 KSKLKISELEFETMKLNYAQTLTTALNEIDAGYKNLQKDEAVLRNLNENLRNLSSISDIY 396 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + Y G+ L + L+ + + + ++ K ++ + + +Y A Sbjct: 397 KLKYDYGKTELKNYLEAQNSLLEGKISALAQKYKILQDEIGIYKA 441 >gi|294624339|ref|ZP_06703038.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601355|gb|EFF45393.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 484 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/334 (23%), Positives = 157/334 (47%), Gaps = 5/334 (1%) Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 S +++DLFG+ R + E +L S +++++++ +Y+ ++ + +A Sbjct: 132 SAYELDLFGRVRSLKEQALQQFLSTAEARRSTHISLVAEVATAYLTLAADQQLLQLAQST 191 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + L F G S+L+L + + +++ D+ + + + L+G Sbjct: 192 LTSQSDSYRLQQRSFELGVASQLTLRQAQTTVETARVDVERYTAQVAQDRNALVLLVGTQ 251 Query: 241 A-TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L + + + + N+ + G+P+ L++ RPDI E+ L + A IG A++ Sbjct: 252 VPVELLPHALPDNASVEGNVLASVPAGLPSQLLQRRPDILEAERNLRAANANIGAARAAF 311 Query: 300 YPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS+SL S + + F WSF P L LPIF+ G+ ++N+ A+++ + Sbjct: 312 FPSISLTASTGSSSSSLSRLFDAGTRAWSFVPTLTLPIFNAGRNRANLDMAKANRDIEVA 371 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++++ +A +EV +AL + + + Q V+ S LS + +G S L LD Sbjct: 372 RYEKSIQSAFREVSDALAQRDTLGRQLQAQQALVDATADSYRLSQARFERGIDSYLQALD 431 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +R+ + L + + V Y A+G G+ Sbjct: 432 AQRSLYSAQQTLINTQLSRFTNLVTFYKAMGGGW 465 >gi|260880655|ref|ZP_05893010.1| outer membrane efflux protein [Vibrio parahaemolyticus AN-5034] gi|308095478|ref|ZP_05906234.2| outer membrane efflux protein [Vibrio parahaemolyticus Peru-466] gi|308125943|ref|ZP_05778229.2| outer membrane efflux protein [Vibrio parahaemolyticus K5030] gi|308086226|gb|EFO35921.1| outer membrane efflux protein [Vibrio parahaemolyticus Peru-466] gi|308092437|gb|EFO42132.1| outer membrane efflux protein [Vibrio parahaemolyticus AN-5034] gi|308114961|gb|EFO52501.1| outer membrane efflux protein [Vibrio parahaemolyticus K5030] Length = 458 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 207/454 (45%), Gaps = 28/454 (6%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + +++D WW +FND +LN+ + Sbjct: 11 ALSAVWLSGCGSLMRSDYQAPAVQV-PANWQQMQVAGDVSMD--PWWLAFNDPTLNQYIT 67 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S + +L + L Sbjct: 68 QVLAQNNDLTLATLTLKKARLQLGLTQDDLFPTLSSSTSGQVQKSLDGGESADSYSTNLS 127 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++++DL+G + + A + +Q D ++++ Y + K+R++++ + Sbjct: 128 VNYELDLWG-KISADVDQAKWTAVASQQDREATAQSLVATTASLYWQIGYLKQRLNLSQR 186 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ + ++L ++ GA +L +++ + + S+++ E+S + + L Sbjct: 187 NVEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQ 246 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P +Q P+L ++G P+DL+ RPDI+ ++ ++A A D Sbjct: 247 PPKSISANIQMLPEGDMPSL----SVGTPSDLLIRRPDIKAAIYEVKAALANKDAADLDY 302 Query: 300 YPSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 303 LPKLTLTGALGGSSKALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQS 357 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 358 AIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMD 417 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ + T + L + + V LY ++G Sbjct: 418 YLNAQEETRNAQASLLENRYNQFLTQVTLYQSLG 451 >gi|167824483|ref|ZP_02455954.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 9] Length = 499 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 47/430 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSY 439 + AV L ++S LS + +G L D +++ A +++ E I +LA ++ Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AH 440 Query: 440 VDLYIAIGSG 449 L +A+G G Sbjct: 441 ASLMVALGGG 450 >gi|327314158|ref|YP_004329595.1| NodT family efflux transporter outer membrane lipoprotein [Prevotella denticola F0289] gi|326944726|gb|AEA20611.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella denticola F0289] Length = 476 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 58/433 (13%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----- 106 W + F D +L L+ AL N + + + AK NIL+ R + PS A++S Sbjct: 57 WRDFFKDPTLCALIDTALANNQDLKITLQEMAIAKSNILAKRGQMLPSVTANVSAGASKA 116 Query: 107 -RF-----------------IPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLD 143 R+ +PN+ + L DW +DL+ Q R +E LA Sbjct: 117 GRYTAEGAGNVGTEITPGHNVPNVVPDFAPNLHLDWSVDLWNQLNSTKRAAVERYLA--- 173 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 S Q I K +++ + +Y ++ I Q + L KK ++++ ++ A ++L Sbjct: 174 SEEGQRTI-KSQLVADVAENYYALLALDNKLDIMQQYIALQKKAVQIARVQKEADADTQL 232 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG---YPATEFLHYMQKQS--NNFQPN 258 ++ K E+E+ ++ L ++ +N++ LLG P T + + +QS N Q Sbjct: 233 AVEKFESELAKASAEEYQLRQAITETENNLNLLLGRYPTPITRNKNVLMEQSLPNTLQ-- 290 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 IPA L+ +RPDI E +L + + A+ PSL+++ S+ L N P Sbjct: 291 -------AIPASLLLHRPDIVAAEHQLRAAKWDVEAARKAFLPSLNISASLGLDAFN--P 341 Query: 319 GY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN- 371 Y + +S L P+ +K I++N +A + E + +T+L A E+ Sbjct: 342 KYLLQLPKSLAFSVVGGLTAPLINKKAIQANFDQANALQLEALYNYDKTLLTAYSEMSTL 401 Query: 372 -ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 A +++ K Q+ S+S + NY + Y L++LD ER +V+L Sbjct: 402 QARARNLAQYQVLKKKQNDALTRAVSVSQQLYNYNRATY--LEVLDSERDQLDCQVELVD 459 Query: 431 AKRQLAKSYVDLY 443 + + + +DLY Sbjct: 460 TQLRQLSTLIDLY 472 >gi|237811983|ref|YP_002896434.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei MSHR346] gi|237504839|gb|ACQ97157.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei MSHR346] Length = 619 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQIN 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|146339400|ref|YP_001204448.1| putative outer membrane efflux protein [Bradyrhizobium sp. ORS278] gi|146192206|emb|CAL76211.1| putative outer membrane efflux protein [Bradyrhizobium sp. ORS278] Length = 526 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 104/480 (21%), Positives = 204/480 (42%), Gaps = 57/480 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT---------------------QFSIGNSKNLINIDTLK 51 VLLA C VGP++ P P F+ G + Sbjct: 32 VLLASCAVGPDFLSPDAPASAGYVREQRLAATAGAATLGGDAQSFAAGGDLPAV------ 85 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 WW F+ +N V A++ + I A + AA+EN LS + LFP AS S Sbjct: 86 WWSLFHSRQINAFVTEAIRNHPDIEAAQLALRAARENALSQQGALFPQVSASGSAERTQG 145 Query: 106 ----HRFIPN---LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVI 157 + P L T + + +D++G RR +E+ A D +++ L++ Sbjct: 146 STTQQGYWPGQTSLYTLYGASVSVSYALDIWGGTRRQVEALQAQADYQAFRMEATYLSLT 205 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ + I +++I+ +I+ + +F GA S+ ++ EA + ++ Sbjct: 206 ANVVTAAITDASLRDQIAATEEIIKAETDQLGRIQRQFDVGAISRSDVLSQEATLAQAKA 265 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 + L+K + + LG L + + L +P + + +P+ L+R R Sbjct: 266 TLAPLQKQLAQQRNQLMAYLGR-----LPSQDRGEHVTLAELRLPRKLPVSLPSSLVRQR 320 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPI 334 PDIR E L + A +G+ ++L P L+L+GS + + F W + + Sbjct: 321 PDIRQAEATLHQATATVGVGIANLLPQLTLSGSYGASGPERLFSPTTIVWEAASGVSQKL 380 Query: 335 FDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 D G + + + A+ + EQ ++ ++ TV+ A + V ++L +I D + + A + Sbjct: 381 IDGGALY-HTKEADVATFEQDLSLYKSTVITAFQNVADSLRAIQYDAESLKAQAAAEKAT 439 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD---LYIAIGSGY 450 S+++++ ++ G +++ +++ V S K Q A + D L+ A+G G+ Sbjct: 440 ADSLAMAIEQFKSGAVPYANVITAQQSYLNARV--SRIKSQ-ATRFTDTAALFQALGGGW 496 >gi|295676760|ref|YP_003605284.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295436603|gb|ADG15773.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 524 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 102/427 (23%), Positives = 188/427 (44%), Gaps = 40/427 (9%) Query: 13 VLLAGCTVGPEYTKPHMPL--------LPTQF--SIGNSKNLINI--DTLKWWESFNDTS 60 +L C+ GP P MP LPTQ + G ++ + +WW+ + + Sbjct: 30 CMLGACSFGPNGDAPAMPQPAHYGAEPLPTQTVPAQGITQQFVTGAQPVPEWWKLYRSEA 89 Query: 61 LNKLVKIALQQNLTILQATER-INAAKENILS-VRADLFPSSYA---SISHRF--IPNLK 113 LN LV L+ N L AT+R + AA+E + + V + L P+ A + +R IP + Sbjct: 90 LNALVDEGLR-NSPTLDATDRSLAAAREQLRAQVGSSLLPTIDAGGQATRNRALAIPEIG 148 Query: 114 TNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYID 166 N+ GQL + + DLFG R ++LA ++ Q++ A+ + + ++ + I Sbjct: 149 PNTFLYNVFVGQLQAHYTFDLFGSARLANAALAARVNVQVYQLEAARRALAANIVSATIT 208 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +I +++ L + +F GA S L+ + S+ + +P L + + Sbjct: 209 SAALHAQIDTTERLVVLANDQARDTERRFALGAVSHADLLNAQQSAASVSASLPALRQQW 268 Query: 227 RMNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H ++ LLG A + + Q P + ++L+R RPDI + Sbjct: 269 LTTRHALAVLLGRTPDAAPDDIDLAQLHVPEQVPVVVP-------SELLRTRPDIEAADA 321 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + +G+A + ++PSLSL+ S+ + + G WS G L P+F G + Sbjct: 322 ALKAAATDVGVATAQMFPSLSLSASMGQGGFSWPVAMSGAGAIWSIGASLSQPLFHGGAL 381 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + R A+ + + +++TVL A + V + L S+ D + + A + + + Sbjct: 382 LAQRRAAQHTYEASVSQYKQTVLAAFQNVADTLASLEHDAQSLDAANIAARSAQGVFNET 441 Query: 401 MINYRQG 407 YR G Sbjct: 442 SARYRLG 448 >gi|189348335|ref|YP_001941531.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189338473|dbj|BAG47541.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 490 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/411 (22%), Positives = 176/411 (42%), Gaps = 64/411 (15%) Query: 17 GCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESFND 58 GC + P T P MP + QF +G + +WW + Sbjct: 22 GCALAPSSTPPAMPSPAHYGAEPQVRQTVAAQGVAQQFDVGAAP------VPQWWRLYRS 75 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENIL--SVRADLFPS--SYASISHRFIPNLKT 114 ++L+ LV L+ N T L ATE+ AA + L + A PS + A ++ P++ Sbjct: 76 SALDALVDEGLRANPT-LAATEKTLAAAQQELRAQIGASTLPSLDANAQVARTRTPDISG 134 Query: 115 NST---------GQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSY 164 GQL + + DLFG R+ ++ A +D +++ A+ + + ++ + Sbjct: 135 AGAQSLRYNVFVGQLQAHYTFDLFGATRYASAASAARVDVRGCELEAARRALAANIVGTA 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I A +I + +++ + + + ++ GA S + S+ + +P L + Sbjct: 195 IGAAALDRQILLTERLVAVAQASAAEDQQRYALGAMSHAQALASTQGAASLAATLPALRQ 254 Query: 225 SFRMNVHNISTLLGY------PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 VH ++ LLG P F L +P + + +P+DL++ RP Sbjct: 255 QRASTVHALAILLGRTPDAPPPIPAFT------------ELSLPEHVPVAVPSDLLKARP 302 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYL 332 DIR E + + A +G A + ++PSLSL S+ S+P G W+ G L Sbjct: 303 DIRAAEAAVRAAAADVGEATAQMFPSLSLTASMG-RGGFSWPALLSGAGGLWAVGAGLSQ 361 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P+F G + ++ R + + ++ VL+A +V ++L +++ D + + Sbjct: 362 PLFHGGALLAHRRASRDLYDAAVLQYKAAVLSAFGDVADSLAALDNDAQAL 412 >gi|91782994|ref|YP_558200.1| major facilitator superfamily efflux pump outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91686948|gb|ABE30148.1| MFS efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 502 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/422 (22%), Positives = 191/422 (45%), Gaps = 24/422 (5%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 +L W F D L +L+ AL+ + +I QA RI A I S R+ L+P SY+ Sbjct: 62 SLDWANQFGDPQLPRLIAEALEGSPSIAQAQARIAKASSYIESSRSALYPKVNGSYSWNR 121 Query: 106 HRFIPNL----------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F N + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELFSANALYPPPYGGTWYSENNVLASASWDLDLWGKNRQRLGQAVSQEKAAEADMQQARV 181 Query: 155 NVISKLIPSYID-ARHFKERISIAHQILDLYKKNI-ELSHLKFTQGATSKLSLVKLEAEI 212 + + + +Y A+ + R A +I + +++I +++ + T G + + I Sbjct: 182 TLAASVASTYNQLAQLYALRDIAAREIAN--REDIGRITNGRVTAGLDTNVERQTANGNI 239 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++++ L+ + + + LLG L Q + + +P N+ PADL+ Sbjct: 240 ATSQANLTDLDGQITVVRYQLGALLGKGPDRGLQIAQPTLSRGDA-VALPDNL--PADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 R DI ++ ++ + AK++ +P ++L G A + FGP Sbjct: 297 ARRADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTSASRQIQFGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 ++LPIFD G ++S +R + + + +T++NA+ +V ++SI + Q A Sbjct: 357 IHLPIFDAGALRSQLRGRYADFELDVANYNQTLINALSDVATQVSSIRSIDQQQGDAQRA 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ K+ L++I Y+ G L +L ++ E ++ K + + L A+G G Sbjct: 417 LDASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAAEQTVTSLKMRRRDMQIGLIKALGGG 476 Query: 450 YN 451 ++ Sbjct: 477 FD 478 >gi|28900080|ref|NP_799735.1| putative efflux pump channel protein [Vibrio parahaemolyticus RIMD 2210633] gi|28808363|dbj|BAC61568.1| putative efflux pump channel protein [Vibrio parahaemolyticus RIMD 2210633] Length = 462 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 207/454 (45%), Gaps = 28/454 (6%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + +++D WW +FND +LN+ + Sbjct: 15 ALSAVWLSGCGSLMRSDYQAPAVQV-PANWQQMQVAGDVSMD--PWWLAFNDPTLNQYIT 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S + +L + L Sbjct: 72 QVLAQNNDLTLATLTLKKARLQLGLTQDDLFPTLSSSTSGQVQKSLDGGESADSYSTNLS 131 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++++DL+G + + A + +Q D ++++ Y + K+R++++ + Sbjct: 132 VNYELDLWG-KISADVDQAKWTAVASQQDREATAQSLVATTASLYWQIGYLKQRLNLSQR 190 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ + ++L ++ GA +L +++ + + S+++ E+S + + L Sbjct: 191 NVEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQ 250 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P +Q P+L ++G P+DL+ RPDI+ ++ ++A A D Sbjct: 251 PPKSISANIQMLPEGDMPSL----SVGTPSDLLIRRPDIKAAIYEVKAALANKDAADLDY 306 Query: 300 YPSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 307 LPKLTLTGALGGSSKALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQS 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 362 AIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMD 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ + T + L + + V LY ++G Sbjct: 422 YLNAQEETRNAQASLLENRYNQFLTQVTLYQSLG 455 >gi|325527997|gb|EGD05225.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 413 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 96/407 (23%), Positives = 189/407 (46%), Gaps = 30/407 (7%) Query: 65 VKIALQQNLTILQATERINAA------KENILSVRADLFPS-SYASISHRF---IPNLKT 114 V AL N I A R++ A +E L+ R + PS S A +S +P Sbjct: 1 VDAALAGNDDIRAAAARVDQAQALLGVREAALAPRVGVAPSFSRARVSGTVDNALPKRTM 60 Query: 115 -NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 N + + +++DL+G+ R E N+ A A +L V +++ Y+ ++ Sbjct: 61 HNWSVPFAASYEVDLWGRLRGDAEIGKQNVLEAAADRAAVRLRVATEVASDYLTLHFVEQ 120 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN-VH 231 ++ + ++L + +++ + GA S L ++ A++ + +D+ + R N V Sbjct: 121 DLATLARAIELRRTALDVIAARVRAGAASDLDALRAAADLDTARADLAD-SRRLRENLVD 179 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPN---LYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 ++ L G T F P + +P + G+P+ L+ RPD+ +++ Sbjct: 180 ALAALTGASPTAF---------TIAPTVSAIRVPTVPPGLPSSLLAQRPDVYAAARRVDA 230 Query: 288 SVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNI 344 + +IG+A++ P+L+L G A +F N+ WS G + +FD GK + + Sbjct: 231 ASLEIGVARTAWLPTLTLTAQGGFASRDLGTFLARNSSLWSLGASVAETVFDGGKRDAAV 290 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A + AQ ++ T L A++EV++AL I +++ + + +A + + LS+ Y Sbjct: 291 AAATAGAQLADANYRATALRALREVQDALNDIAAERERIVRYDNAARAAEAAARLSLSRY 350 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+++D +R + L +++ LA + V+L A+G G+ Sbjct: 351 GHGYVSYLEVIDADRDALNAQRQLIHSRQSLAIATVNLVRALGGGWT 397 >gi|167911235|ref|ZP_02498326.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 112] Length = 532 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 47/430 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSY 439 + AV L ++S LS + +G L D +++ A +++ E I +LA ++ Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AH 440 Query: 440 VDLYIAIGSG 449 L +A+G G Sbjct: 441 ASLMVALGGG 450 >gi|256422041|ref|YP_003122694.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] gi|256036949|gb|ACU60493.1| RND efflux system, outer membrane lipoprotein, NodT family [Chitinophaga pinensis DSM 2588] Length = 469 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 101/470 (21%), Positives = 213/470 (45%), Gaps = 42/470 (8%) Query: 10 LFIVLLAG-CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LF + LAG C V + P P+ F GN + +I + W F D L +L+ Sbjct: 11 LFFMALAGACRVSKDLPD-QRPETPSAFRNGNDTDTSSIAGIPWKSFFTDKVLQELIDST 69 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQ----- 119 L +N + A + + ++ + + + P + AS ++ +L + GQ Sbjct: 70 LARNFDMQSALKNLEQSQLVLQQSKWNNVPVVGLNVTASTTNPSNNSLNGLTLGQFLGTD 129 Query: 120 --------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L W+ D++G+ R+ +LA+ + + + +I+ + Y + Sbjct: 130 HLEDYSANLSVSWEADIWGKIRNTNRLALASYLQSQEARKVLQTGLIAAVSQGYFNLLML 189 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +++I + L L + + L++ G + L++ + A+ + +P LE++ + Sbjct: 190 DAQLNIVEKNLTLNDSTVLIVQLQYEAGQVTYLAVQQAIAQRQLSAGLLPQLEQAIIIQE 249 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADS 288 + I L G + N+ ++ P ++ GIP+++I RPD++ E +L + Sbjct: 250 NAIRFLSGQLPDKI------DRNSLLEDITFPSILSAGIPSEMISRRPDVKSSEFELMIA 303 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNI 344 +++GIAK+ +YPSL + S + + +N S G + P+ ++ + Sbjct: 304 NSRVGIAKAQMYPSLRITASGGVNSLRASDWFNIPGSIFGVVGGGVLQPLLQHKELSTQY 363 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK-KSMSLSMIN 403 R A+ ++ + +++TVL A+ EV +AL SI + K++ +V + K++ + IN Sbjct: 364 RVAQLEREKTVLLFRQTVLKAVGEVSDALASIEK-----LKVRESVTAERVKTLQEATIN 418 Query: 404 ----YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ G + L+++ + + E+DL+ K + DLY ++G G Sbjct: 419 ANALFQNGMANYLEVITAQSNVLQCELDLAAIKCAELTAISDLYRSLGGG 468 >gi|167816111|ref|ZP_02447791.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 91] Length = 549 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 47/430 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSY 439 + AV L ++S LS + +G L D +++ A +++ E I +LA ++ Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AH 440 Query: 440 VDLYIAIGSG 449 L +A+G G Sbjct: 441 ASLMVALGGG 450 >gi|218673526|ref|ZP_03523195.1| nodulation protein [Rhizobium etli GR56] Length = 119 Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 44/103 (42%), Positives = 72/103 (69%) Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +S A+ QY+ W+ VL+ ++EVENALT++ D + + L+ V+ ++S++LS +Y+ G Sbjct: 2 KSDARTQYLAWKAAVLSGVEEVENALTAVRRDTQTLEPLRRQVQTAQESLALSTTSYKDG 61 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 SLLD+LD +R+ + E L+ +Q+AK YVDLY+AIG+GY Sbjct: 62 ASSLLDVLDAQRSVSDAEASLAATVQQVAKDYVDLYVAIGAGY 104 >gi|161522826|ref|YP_001585755.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160346379|gb|ABX19463.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] Length = 488 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/411 (22%), Positives = 176/411 (42%), Gaps = 64/411 (15%) Query: 17 GCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESFND 58 GC + P T P MP + QF +G + +WW + Sbjct: 20 GCALAPSSTPPAMPSPAHYGAEPQVRQTVAAQGVAQQFDVGAAP------VPQWWRLYRS 73 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENIL--SVRADLFPS--SYASISHRFIPNLKT 114 ++L+ LV L+ N T L ATE+ AA + L + A PS + A ++ P++ Sbjct: 74 SALDALVDEGLRANPT-LAATEKTLAAAQQELRAQIGASTLPSLDANAQVARTRTPDISG 132 Query: 115 NST---------GQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSY 164 GQL + + DLFG R+ ++ A +D +++ A+ + + ++ + Sbjct: 133 AGAQSLRYNVFVGQLQAHYTFDLFGATRYASAASAARVDVRGCELEAARRALAANIVGTA 192 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 I A +I + +++ + + + ++ GA S + S+ + +P L + Sbjct: 193 IGAAALDRQILLTERLVAVAQASAAEDQQRYALGAMSHAQALASTQGAASLAATLPALRQ 252 Query: 225 SFRMNVHNISTLLGY------PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 VH ++ LLG P F L +P + + +P+DL++ RP Sbjct: 253 QRASTVHALAILLGRTPDAPPPIPAFT------------ELSLPEHVPVAVPSDLLKARP 300 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYL 332 DIR E + + A +G A + ++PSLSL S+ S+P G W+ G L Sbjct: 301 DIRAAEAAVRAAAADVGEATAQMFPSLSLTASMG-RGGFSWPALLSGAGGLWAVGAGLSQ 359 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P+F G + ++ R + + ++ VL+A +V ++L +++ D + + Sbjct: 360 PLFHGGALLAHRRASRDLYDAAVLQYKAAVLSAFGDVADSLAALDNDAQAL 410 >gi|330959098|gb|EGH59358.1| outer membrane efflux protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 462 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 95/422 (22%), Positives = 188/422 (44%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSPELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + + L +F G+ + L L + + + + Sbjct: 168 LLSNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRFDAGSATALELAQQKNLVATQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + ++ F + I G+P+DL+ R Sbjct: 228 QRELPRIQQLANEQLITLAALLGQP----VQNLKLSDQAFDTLNWPDIGAGVPSDLLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +LA + A + +A++ + P L L+ + + + S L PI Sbjct: 284 PDLAKAEAELAAAQANVTVARAAMLPKLMLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + RA + QE T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 344 FNNGRLGAERDRASARQQELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 400 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 401 QAQTAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARMQ---ASIALYKALGG 457 Query: 449 GY 450 G+ Sbjct: 458 GW 459 >gi|282889558|ref|ZP_06298100.1| hypothetical protein pah_c001o037 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500571|gb|EFB42848.1| hypothetical protein pah_c001o037 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 492 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 109/490 (22%), Positives = 209/490 (42%), Gaps = 44/490 (8%) Query: 1 MNILRAIFSLFIVLLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTLKW-----WE 54 M +L IF ++ L+GC+ P + +P P ++ + ++L + +W W Sbjct: 1 MKLLVRIFLGCLLFLSGCSNRIPSASGIEIPDAPLIKAVQDVEDLPLFEKTEWVPQEWWT 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR------- 107 FND L L+ AL N ++ A ++ +A R+ L+P+ Y + + Sbjct: 61 IFNDDQLTDLINRALSNNPSLQSAKAKVYSALYRSDVQRSYLYPNVYNEVDVQREKLSKT 120 Query: 108 --------------------FIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAY 146 IP T + DL+ +RR+ ++L L ++ Sbjct: 121 SLIPAQASPPPVGVIPPVAVPIPFYFTQYDFNFFLTYDFDLWEKRRNTYRAALGELQASL 180 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A +L V L SY + + R + +++ + + N+ L + T S L+L Sbjct: 181 ADRIFTELTVSISLAQSYFQLQTDRYRKELTERLVQIRENNLNLIKNRITHNLDSNLNLY 240 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS--NNFQPNLYIPIN 264 + E + + TL + + +H+ + Y EF ++ S N P + +P N Sbjct: 241 QTEDLLTAARQ---TLSQRVQSALHDELQVQSYIGGEFDTEIESISIPNKALPKVPLP-N 296 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYN 321 + +P LI +RPDI Q L + +I IA++ YP +L G + F + Sbjct: 297 V-LPLHLIAHRPDIISQLWMLESAGRQIKIAQAGFYPDFNLTTLLGFQTIHFKKLFEARS 355 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + + F P LPIFD G + +N+R +E + + + V+NA++EV +AL + + Sbjct: 356 SVYDFEPAYTLPIFDGGLLTANLRGSEVNYDLAIFEYNQRVINAVQEVLDALVIVKQSYI 415 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + + + ++ +K++ L + SL+DI E + ++A + ++ Sbjct: 416 RLQEARQDADIQRKALDLVKQRIKNNLSSLIDIHLSEETYITALDNEAVALNNTFSAILN 475 Query: 442 LYIAIGSGYN 451 L A+G GY+ Sbjct: 476 LIKALGGGYD 485 >gi|254179613|ref|ZP_04886212.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|184210153|gb|EDU07196.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] Length = 634 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 168/353 (47%), Gaps = 38/353 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW + +L+ LV L+ + T+ A + ++AA+E + + + + L P+ A + R Sbjct: 78 WWTRYRSPALDALVDEGLRNSPTLAAAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRER 137 Query: 108 FI--PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVIS 158 + P + GQL + + +DLFG R +L+ +D Q++ A+ + + Sbjct: 138 ALGMPAFGPQTVLYNVFAGQLQASYTLDLFGAARFANRALSKRVDVNAYQLESARRALAA 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + + + E+++ +++ L ++ + + GA S+ ++ ++E+ Sbjct: 198 NIVTAAVTSAALAEQVATTERLVALAREQASDAAARHRLGAASRTDMLNTRQSAAALEAS 257 Query: 219 IPTLEKSFRMNVHNISTLLG-----YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADL 271 +P L + + H ++ LLG PA L +L++P + + +P+ L Sbjct: 258 LPALRQQAQSARHALAVLLGRTPDAAPANLALA-----------DLHLPQDVPVVVPSTL 306 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFP----GYNTHWSF 326 ++ RPDIR E L + A++G+A + ++P LSL+ S+ H +P G WS Sbjct: 307 LQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMG--HAGFKWPAMLSGAGAIWSV 364 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L P+F G + + R A +S +++TVL A ++V + L ++ D Sbjct: 365 GASLTQPLFHGGALLAQRRAARASYAAAVDQYKQTVLAAFQDVADKLAALEND 417 >gi|53725431|ref|YP_102662.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|52428854|gb|AAU49447.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei ATCC 23344] Length = 593 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 109/484 (22%), Positives = 216/484 (44%), Gaps = 51/484 (10%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 6 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 65 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 66 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 125 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 126 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 185 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 186 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 245 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 246 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 298 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 299 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 358 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQLAKSYVDLYIA 445 AV L ++S LS + +G +++L + TA+ E I +LA ++ L +A Sbjct: 416 -AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARLA-AHASLMVA 472 Query: 446 IGSG 449 +G G Sbjct: 473 LGGG 476 >gi|53803742|ref|YP_114651.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] gi|53757503|gb|AAU91794.1| outer membrane efflux family protein [Methylococcus capsulatus str. Bath] Length = 475 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 113/486 (23%), Positives = 213/486 (43%), Gaps = 54/486 (11%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 + R + L + L C + T+ LP QF G + N +KW + F D +L Sbjct: 5 VCRFLAVLASLTLQACGIPDMTTRTADVHLPDQFKAGPTDK-SNSAIIKWNDFFEDENLL 63 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYA------- 102 L++ A+ N + +RI+AA+ I + R P Y Sbjct: 64 NLLETAVANNKDVNIMMQRISAAENEIQARRGAYLPFIRTGANAGGEKPGDYTFNGAVER 123 Query: 103 --SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKL 160 ++ P + L S W++D++ + R+ + +A L+ Y K +I+ L Sbjct: 124 NLPLAGNPFPTFVGDYQFGLTSTWELDIWRKLRN-ATEVAMLE--YMATMEGKNFLITNL 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSH---------LKFTQGATSKLSLVKLEAE 211 + A + E +++ +Q+ +L +NI + KF + L++ + EAE Sbjct: 181 VADV--AHSYYELVTLDNQLENL-DQNIAIQQDALRIVKELQKFARA--DALAVKRYEAE 235 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF---QPNLYIPINIGIP 268 + +S +++ + + I+ LLG +++ S F +P L IN GIP Sbjct: 236 VAKNQSKRYEIKQEIVVVENRINYLLGRTP----QPIKRTSAGFLDLEPKL---INTGIP 288 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP 328 + L+ NRPDIR E LA + I +A+++ +PS + + NT S Sbjct: 289 SQLLLNRPDIRKAELDLAAAQLNIEVARAEFFPSFGIRAGVGFDAFAMKYLINTPESLAA 348 Query: 329 ----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 +L P+ +K I +N + A E ++++++NA EV N +++I +K Sbjct: 349 YVAGELVAPLVNKNAIIANFKTANVKQVEAAFEYEKSIINAYVEVLNQISNIENTRKSFN 408 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + V+ KS+ +S+ ++ R LD+L +R + + +L K++ + VDLY Sbjct: 409 LKKDQVDHLVKSIDISIQLFKSARTFYLDVLTTQRDALEAKRELIETKQKQVFAMVDLYK 468 Query: 445 AIGSGY 450 ++G G+ Sbjct: 469 SLGGGW 474 >gi|226192951|ref|ZP_03788563.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei Pakistan 9] gi|225935041|gb|EEH31016.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei Pakistan 9] Length = 585 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 192/426 (45%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + AV L ++S LS + +G +++L + + + + + ++ L Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLM 444 Query: 444 IAIGSG 449 +A+G G Sbjct: 445 VALGGG 450 >gi|254297866|ref|ZP_04965319.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 406e] gi|157807864|gb|EDO85034.1| putative fusaric acid efflux protein [Burkholderia pseudomallei 406e] Length = 567 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 192/426 (45%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + AV L ++S LS + +G +++L + + + + + ++ L Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLM 444 Query: 444 IAIGSG 449 +A+G G Sbjct: 445 VALGGG 450 >gi|67641038|ref|ZP_00439825.1| outer membrane efflux protein OprA [Burkholderia mallei GB8 horse 4] gi|238521885|gb|EEP85333.1| outer membrane efflux protein OprA [Burkholderia mallei GB8 horse 4] Length = 356 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 144/309 (46%), Gaps = 20/309 (6%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++++++ + Y+ + + + L + + +L+ L+F G S+L L + + Sbjct: 21 AEISLVASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTV 80 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +++ + ++ ++ + L+G P + L N Q NL I G+P+DL Sbjct: 81 VETALASQQAQARARAQALNALVLLIGEPLPDDLP--ADLPLNAQ-NLLTDIPAGLPSDL 137 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDI E+ L + A IG A++ +P +SL G+ + T F WSF P Sbjct: 138 LTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASTTLGGLFKAGTAAWSFAP 197 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF+ G+ +N+ A + + +++ + +A +EV + L + + + L+ Sbjct: 198 NIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALER 257 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVD 441 ++ LS + YR G S L +L + DL A++QL + VD Sbjct: 258 NEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVD 310 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 311 LYRALGGGW 319 >gi|289623895|ref|ZP_06456849.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868303|gb|EGH03012.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 469 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 208/468 (44%), Gaps = 39/468 (8%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSRWLPATAAQPAASGSVPTD-IEWQNFFIDNRLVRLQNL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----------- 116 AL N + A+ + A+ RA P+ AS S + S Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPSSTSTTGKSSISHEY 130 Query: 117 TGQLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 131 SAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAAD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 187 NQLLKLAEDTLASQQKSYDLTRNSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQDR 246 Query: 231 HNISTLLGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G E L MQ + Q +P ++ P+ L++ RPD+ E L Sbjct: 247 NALRLLVGSDLPEELLPDADMQSVAQLVQ----VPDDL--PSSLLQRRPDVLSAEHTLKA 300 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 301 ANIDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGTNRATL 360 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ Y Sbjct: 361 DSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALY 420 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 421 RGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|167919256|ref|ZP_02506347.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei BCC215] Length = 563 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 192/426 (45%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + AV L ++S LS + +G +++L + + + + + ++ L Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLM 444 Query: 444 IAIGSG 449 +A+G G Sbjct: 445 VALGGG 450 >gi|167894593|ref|ZP_02481995.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 7894] Length = 458 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 192/426 (45%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + AV L ++S LS + +G +++L + + + + + ++ L Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLM 444 Query: 444 IAIGSG 449 +A+G G Sbjct: 445 VALGGG 450 >gi|289648446|ref|ZP_06479789.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aesculi str. 2250] Length = 469 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 112/468 (23%), Positives = 208/468 (44%), Gaps = 39/468 (8%) Query: 13 VLLAGCT-VGPEYTKPHMPL----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC + P+Y +P P+ LP + + + D ++W F D L +L + Sbjct: 12 ALLAGCVNLAPDYQRPEAPVSSRWLPATAAQPAASGSVPTD-IEWQNFFIDNRLVRLQNL 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS----------- 116 AL N + A+ + A+ RA P+ AS S + S Sbjct: 71 ALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPSSTSTTGKSSISHEY 130 Query: 117 TGQLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + QL S +++D+FG Q +E LA ++ + ++++I+++ ++ Sbjct: 131 SAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAAD 186 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + +A L +K+ +L+ G +S L + + + ++S D+ + + Sbjct: 187 NQLLKLAEDTLASQQKSYDLTRNSHALGGSSGLEVAQAQTTVESARGDVAQYKSQILQDR 246 Query: 231 HNISTLLGYPATEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + L+G E L MQ + Q +P ++ P+ L++ RPD+ E L Sbjct: 247 NALRLLVGSDLPEELLPDADMQSVAQLVQ----VPDDL--PSSLLQRRPDVLSAEHTLKA 300 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 301 ANIDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGANRATL 360 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A+ Q Q T+Q+T+ A KEV +AL + + + Q + ++S L+ Y Sbjct: 361 DSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALY 420 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G S L+ L+ +R+ E +L + + V LY +G G+NP Sbjct: 421 RGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGGGWNP 468 >gi|251767887|ref|ZP_02268720.2| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei PRL-20] gi|243061477|gb|EES43663.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei PRL-20] Length = 608 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|238561778|ref|ZP_00441438.2| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei GB8 horse 4] gi|238523873|gb|EEP87309.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei GB8 horse 4] Length = 620 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 217/486 (44%), Gaps = 55/486 (11%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 33 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 92 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 93 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 152 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 153 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 212 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 213 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 272 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 273 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 325 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 326 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 384 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQ 387 LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K + Sbjct: 385 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR-- 442 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLY 443 AV L ++S LS + +G L D +++ A +++ E I +LA ++ L Sbjct: 443 -AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLM 497 Query: 444 IAIGSG 449 +A+G G Sbjct: 498 VALGGG 503 >gi|15599089|ref|NP_252583.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|218889825|ref|YP_002438689.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|9950075|gb|AAG07281.1|AE004806_8 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|218770048|emb|CAW25810.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 496 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 91/444 (20%), Positives = 197/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + PE L T +I + +WW+ + D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPEAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 245 IQLTRNLLAALAGKGPGEG-RTIRRPSLNLAAQPSLP--SALPAELLGRRPDVVARRWQV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 302 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 361 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + +V + Sbjct: 362 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---SVASAQ 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 416 KTYDIATLAYQRGLTDYLNVLNAQ 439 >gi|167902995|ref|ZP_02490200.1| putative fusaric acid efflux protein [Burkholderia pseudomallei NCTC 13177] Length = 523 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 47/430 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N +P A+L+ Sbjct: 216 RQIDSYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELL 268 Query: 273 RNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 RPDI + + D+ A+ I +AK+ YP++ SL G +++ N WS Sbjct: 269 GRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 327 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 328 GPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 387 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSY 439 + AV L ++S LS + +G L D +++ A +++ E I +LA ++ Sbjct: 388 AR---AVSLTRRSYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AH 440 Query: 440 VDLYIAIGSG 449 L +A+G G Sbjct: 441 ASLMVALGGG 450 >gi|326319004|ref|YP_004236676.1| NodT family RND efflux system outer membrane lipoprotein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375840|gb|ADX48109.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 427 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 97/410 (23%), Positives = 194/410 (47%), Gaps = 15/410 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW++F+D +L+ LV ALQ+NL + A R+ A+ PS A R + + Sbjct: 14 WWKAFHDPALDALVDEALQKNLDLAIAAHRLREARLQAGRAAVQFRPSFGAGA--RTLQD 71 Query: 112 LKTNST---GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + +D W++ LFG +S A+ D+A A A++ V+++++ +Y+D Sbjct: 72 IEATDSYFHASIDMVWELGLFGAAESARASATADRDAAVADGQGARVAVVAEVVRNYLDL 131 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQ--GATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + ++ + + L ++ L+ ++ GAT +++ ++ P E++ Sbjct: 132 QAARRQLQLLDRQAALDERAARLAEVRRRTWTGATDEVASAGMQRARTRAARAEP--EQA 189 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +++ LL A + P L +PADL+R RPD++ E + Sbjct: 190 RARAAQSLAVLLDRVAPD--PAWSAAGPVRVPTLAPFAFSALPADLLRTRPDVQAAEAAV 247 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A++G+A+S+LYP +++ GS+ ++ N + + GP + +P+FD G+ + Sbjct: 248 RKAAAEVGMARSELYPRIAITGSLLYAYNITRNRRTTSDNVPAIGPTIDIPLFDWGRRRM 307 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + + + Q +T+Q TV A+ E E AL+++ + L A + + + Sbjct: 308 QVDAQQEALQAAALTYQRTVRGAVAEAEGALSALAAQQNRADALAEAQPALAERVRAGSV 367 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R G S D L +RA + E + + A+ + ++V LY A+G P Sbjct: 368 QARLGLASEYDGLAAQRAALQAEAEWATAQDARSLAFVALYKALGGAPLP 417 >gi|295676266|ref|YP_003604790.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295436109|gb|ADG15279.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 506 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 108/457 (23%), Positives = 200/457 (43%), Gaps = 60/457 (13%) Query: 33 PTQFSIGNSKNLINID----TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 PTQ+ ++++L N +L W F D L KL+ AL+ + +I QA R+ A Sbjct: 44 PTQYE--STQSLPNEGGQWPSLDWANQFGDPQLPKLIAEALEGSPSIAQAQARLAKASSY 101 Query: 89 ILSVRADLFPSS---YA------SISHRFIPNLKTNSTGQ----LDSDWKIDLFGQ-RRH 134 I S R+ LFP + Y+ S + F P + + W +DL+G+ R+ Sbjct: 102 IESSRSALFPKAELNYSWTRELYSANALFPPPFGGTWFSENNVLASASWDLDLWGKNRQR 161 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSY-----------IDARHFKERISIAHQILDL 183 + +++ +A A + A++ + + + +Y I AR R + + Sbjct: 162 LGQAVSQQKAAEADMQQARVTLAASVASTYNQLAQLYAFRDIAAREIANRQDVGRITDNR 221 Query: 184 YKKNIELSHLKFTQG---ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 K ++ + K T ATS+ +L L+ +I + + + LLG Sbjct: 222 VKAGLDTNVEKQTAAGNIATSQSNLTDLDGQITVVR--------------YQLGALLGKG 267 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L + K + +P NI PADL+ R DI ++ ++ + AK++ Y Sbjct: 268 PDRGLQ-IDKPVLTGGNVVALPDNI--PADLVARRADIVAARWQVEAAMHDVKEAKAEFY 324 Query: 301 PSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P ++L G A + FGP ++LP+FD G +++ ++ + + Sbjct: 325 PDVNLAAGFGFDAFGWGRFLTSSSRQIQFGPAIHLPLFDAGALRAQLKGRYADFEGDVAN 384 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL-- 415 + +T++NA+++V ++SI + Q A+E K+ L++I Y+ G L +L Sbjct: 385 YNQTLINALQDVSTQVSSIRSIDRQEGDAQRALEASSKAYQLAVIRYKAGLSPQLQVLTA 444 Query: 416 DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSGYN 451 D R A+ V L + +R L + L A+G G++ Sbjct: 445 DDNRLAAEQTVTGLQMRRRSL---QIGLIKALGGGFD 478 >gi|254242587|ref|ZP_04935909.1| hypothetical protein PA2G_03341 [Pseudomonas aeruginosa 2192] gi|126195965|gb|EAZ60028.1| hypothetical protein PA2G_03341 [Pseudomonas aeruginosa 2192] Length = 496 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/444 (20%), Positives = 197/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + PE L T +I + +WW+ + D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPEAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 245 IQLTRNLLAALAGKGPGEG-RTIRRPSLNLAAQPSLP--SALPAELLGRRPDVVARRWQV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 302 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 361 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + +V + Sbjct: 362 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---SVASAQ 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 416 KTYDIATLAYQRGLTDYLNVLNAQ 439 >gi|332526573|ref|ZP_08402683.1| type I secretion outer membrane protein [Rubrivivax benzoatilyticus JA2] gi|332110839|gb|EGJ11016.1| type I secretion outer membrane protein [Rubrivivax benzoatilyticus JA2] Length = 464 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 186/422 (44%), Gaps = 29/422 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +W F D +L +L A + N + A + A+ RA P+ Sbjct: 42 EWRGVFADPALQRLTAAAHEHNRDLRLAALNVEIARAQYGIERAARLPAVALEAGAQRER 101 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 + AS + S G S +++D FG+ + + +++LA ++ A+L + Sbjct: 102 ALASGGDSASTRSQQASLGLGLSAFELDFFGRVKALSDAALARYLASEHGRRAAELALDG 161 Query: 159 KLIPSYIDARHFKERISIAHQIL-----DLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + ++ F +R+++A + L + +++ + L ++ G +S L LV+ E E+ Sbjct: 162 AVADAW-----FAQRLALAQRDLAERTHEDWRQTLALLRMQREAGQSSALDLVQAEGELA 216 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 S E+++ ++ + + L+G T + P + + G+P+ + Sbjct: 217 SAEAELQARRRALEQAGNALRLLVG---TALPGELPPPLALDAPPVAVQAPAGLPSQRLL 273 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKL 330 RPD++ E+ LA S A++G A++ +P ++L ++ + D F W P+ Sbjct: 274 RRPDLQQAEQLLAASQAEVGAARAAFFPQITLTAALGVASPSLDALFGDGRRVWRLAPQA 333 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP+ D G+ + +R AE E +++ ++ A +EV +AL + + AV Sbjct: 334 SLPLLDGGRRRQELRLAELRRSEALASYERSIQTAFREVADALAAAATLGPQIEAQSRAV 393 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L+ + YR G L++LD R ++ L +R + V L++A+G G Sbjct: 394 ASAARRVELTELRYRAGLEGRLELLDARRQQHAAQLALLELRRAELGNAVALFLALG-GE 452 Query: 451 NP 452 P Sbjct: 453 AP 454 >gi|281423708|ref|ZP_06254621.1| multidrug resistance protein, FusA/NodT family [Prevotella oris F0302] gi|281402260|gb|EFB33091.1| multidrug resistance protein, FusA/NodT family [Prevotella oris F0302] Length = 466 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 41/475 (8%) Query: 2 NILRAIFSLFI--VLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKN-LINIDT-----LKW 52 NI + IF + I V+L GC ++ +Y +P + + + K+ L+ DT + W Sbjct: 4 NINKTIFLMAIAAVILTGCKSLYGKYERPQVNTSGVFRDVVSDKDTLVATDTATFANIPW 63 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 F DT L +L++ L N +L A + A+ + + + PS +A I + Sbjct: 64 RSVFTDTQLQRLIEQGLAHNPNLLNAALNVQMAEAQLKAAKLSFLPS-FAFTPQGTISSW 122 Query: 113 KTNSTGQLDS-----DWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N ++ S W +DLFG +R + +L L S QV + + +I+ + Sbjct: 123 DGNKANKVYSLPVTASWNVDLFGTLLSSKRAAQVAL--LQSKDYQVSV-QTKLIANIANM 179 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHL-KFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y +++ + + L K ++ L K ++ + EA S+ + + Sbjct: 180 YYTLLMLDKQMELVTDMEKLTKDTWDIMVLQKDAIVGVRSTAVQRAEANYYSVLTQKVDI 239 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRY 280 ++ R + +S L+G A Q + + +PIN G+ L++NR D+ Sbjct: 240 KRQIRETENALSLLIGQQA-------QSINRGKLEDQMLPINFSTGVGLQLLQNRADVHA 292 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFD 336 E LA + A+S YP L++N S A T+ PG + G L PIF Sbjct: 293 AEMALAQCFYNVETARSRFYPVLNINASGAFTNSGGMGIVNPGKWLLTAVGS-LTQPIFQ 351 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQHAVELHK 394 GK+ + ++ A++ ++ + TWQ VL A EV NAL N E+K V Q +E+ K Sbjct: 352 NGKLVAGLKVAKAQYEQAFNTWQNAVLTAGSEVSNALVQYNSAEEKSKVEAKQ--IEVLK 409 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K++ + + L+++ + + E+ ++ V+LY A+G G Sbjct: 410 KNVDDTKELMASAGSTYLEVITAQSSLLNAELSKVADDFSKMQAVVNLYSALGGG 464 >gi|161524923|ref|YP_001579935.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|189350327|ref|YP_001945955.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] gi|160342352|gb|ABX15438.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia multivorans ATCC 17616] gi|189334349|dbj|BAG43419.1| RND efflux system outer membrane lipoprotein [Burkholderia multivorans ATCC 17616] Length = 498 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 94/427 (22%), Positives = 191/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL N +I QA RI A I S R++L P + AS S Sbjct: 62 SLDWASQFGDPQLPKLIDEALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTR 121 Query: 108 --------FIPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVD 150 F P GQ S+ W++DL+G+ R + ++++ +A A + Sbjct: 122 ELYSANGLFPPPYG----GQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQ 177 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + S + +Y IA + + + +++ + + G + + Sbjct: 178 QARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARG 237 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 I + ++ + L+ + ++ LLG L + N ++ +P N+ PAD Sbjct: 238 NIATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQ-IAAPVLNPAGDVALPDNL--PAD 294 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWS-FG 327 L+ RPDI ++ ++ + AK++ +P ++L F + + + FG Sbjct: 295 LVSRRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + +I + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVAAIRAIDRQMGDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|78066116|ref|YP_368885.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77966861|gb|ABB08241.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 498 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 92/427 (21%), Positives = 187/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L KL+ ALQ N +I QA RI A I S R+ L P + AS S Sbjct: 62 ALDWASQFGDPQLPKLIDEALQGNPSIAQAQARIAKASSYIESSRSSLMPKAEASYSWTR 121 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 122 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRERLHTAVSQEKAAEADMQQARI 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + S + +Y IA + + + +++ + + G + + I + Sbjct: 182 TLASSVARTYNSLAQLYALRDIAQREITNRETVGKITDGRVSAGLDTNVERQTARGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L+ + ++ LLG L N P+ + + +PADL+ Sbjct: 242 TQASLSDLDGQITTVRYQLAALLGKGPDRGLQIAAPVLN---PSGEVALPGNLPADLVAR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPDI ++ ++ + AK++ YP ++L ++F G+ FG Sbjct: 299 RPDIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGF---DAF-GWGKFLNFASRQAQFG 354 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Q Sbjct: 355 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAVDRQMGDAQ 414 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L + A+ + +L + +R + + L Sbjct: 415 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 471 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 472 ALGGGFD 478 >gi|298479639|ref|ZP_06997839.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] gi|295084933|emb|CBK66456.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Bacteroides xylanisolvens XB1A] gi|298274029|gb|EFI15590.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. D22] Length = 454 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 109/469 (23%), Positives = 206/469 (43%), Gaps = 48/469 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+++ DT L W E F D SL Sbjct: 6 ILSAATLVLSSCGI---YNK-YKPVSEVPEGLYGSESVAAADTANFGNLSWQEVFTDPSL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNSTG 118 L+ AL +N + A R+ A+ +L+ + PS + + + F T + Sbjct: 62 QNLIDSALVRNTDMQTAHLRVKEAEATLLTSKLSYLPSLFLAPEGAASSFDRGKATQTYS 121 Query: 119 -QLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K +++ + +Y + Sbjct: 122 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVASVANTYYTLLMLDSQ 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA +K+++ + G ++ L + EA +I + + L++ +++ Sbjct: 179 YEIAVATEAAWKESVNATRAMKKAGMVNEAGLAQTEATYYNICTTVLDLKEQINQAENSL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL E H +Q+ N +P N +G+P ++ NRPD+R E LA + Sbjct: 239 ALLLA----ETPHEIQRGKLG---NQQLPENFSVGVPLQMLSNRPDVRSAEFSLAQAFYT 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A Sbjct: 292 TNAARAAFYPSITLSGSAGWTNSAGSMIVNPG-KFLASAVASLTQPLFNKGANIAQLKIA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLS 400 ++ +E +++++T+LNA EV AL + K V LQ A KS SL Sbjct: 351 KAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKADYYDKQVASLQTAA----KSTSLL 406 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 M + G + L++L ++ ++ + + + LY A+G G Sbjct: 407 M---KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 452 >gi|237798653|ref|ZP_04587114.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021506|gb|EGI01563.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 380 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 157/339 (46%), Gaps = 20/339 (5%) Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 S +++DLFG+ R + E +L S+ ++++++ + +Y+ + KE + + Sbjct: 32 SAYELDLFGRVRSLSEQALETYFSSEEARRSTQISLVANVANAYMTWQADKELLKLTQDT 91 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-- 238 L Y+++ L+ G +S L L + ++S + + ++ + +++ LLG Sbjct: 92 LKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARAKLAQYQRLVAQDQNSLVMLLGTN 151 Query: 239 ----YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 PA+ L ++ + G+P+DL++ RPDI E L + A IG Sbjct: 152 LPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRPDILQAEHTLKAANANIGA 201 Query: 295 AKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A++ +PS+SL S + F G + W F P + +PIF+ G +++++ ++ Sbjct: 202 ARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGNLRASLDYSKIQK 261 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + +++ + A +EV + L S + + + V ++ L+ YR G S Sbjct: 262 EISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDYVAANQDYYRLAERRYRIGIDSN 321 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L LD +R+ + L + S V+LY A+G G+ Sbjct: 322 LTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 360 >gi|107103411|ref|ZP_01367329.1| hypothetical protein PaerPA_01004481 [Pseudomonas aeruginosa PACS2] Length = 506 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/444 (20%), Positives = 197/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + PE L T +I + +WW+ + D Sbjct: 15 FVGFLVVFSAISGCVSTGDIAPEAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 74 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 75 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 134 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 135 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 194 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 195 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 254 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 255 IQLTRNLLAALAGKGPGEG-RTIRRPSLNLAAQPSLP--SALPAELLGRRPDVVARRWQV 311 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 312 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 371 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + +V + Sbjct: 372 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---SVASAQ 425 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 426 KTYDIATLAYQRGLTDYLNVLNAQ 449 >gi|297518771|ref|ZP_06937157.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli OP50] Length = 321 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 25/316 (7%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N + W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + Q Q+ N + + G+ + ++ RPDI E L + A IG Sbjct: 244 LLLG----SYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299 Query: 295 AKSDLYPSLSLNGSIA 310 A++ +PS+SL I+ Sbjct: 300 ARAAFFPSISLTSGIS 315 >gi|148259156|ref|YP_001233283.1| RND efflux system outer membrane lipoprotein [Acidiphilium cryptum JF-5] gi|146400837|gb|ABQ29364.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidiphilium cryptum JF-5] Length = 502 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 104/455 (22%), Positives = 190/455 (41%), Gaps = 27/455 (5%) Query: 15 LAGCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LAGC VGP + HMP +P +FS + WW F L++LV+ A N Sbjct: 50 LAGCAVGPAF---HMPQTNVPARFSA-TADAKPAWPKPGWWRHFGSPELDRLVEAAKAHN 105 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRF----------IPNLKTNS-TGQLD 121 ++++A +++ AA A L P+ S S F + + T S T Sbjct: 106 FSVIEAIDQLEAANAQAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSFTATFQ 165 Query: 122 SDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + +++D +G+ + ++ AN +A L + + Y +++++ IA + Sbjct: 166 ASYQLDFWGKNYDALRAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRN 225 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 L + + + G ++ + A + S ++IP L R + L G Sbjct: 226 LKAAEGLLAQLRAELRAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGR- 284 Query: 241 ATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A EFL L +P + G+PA L+ RPDI + L + A + A + Sbjct: 285 APEFLRVRGGSLGA----LTVPALAPGLPAGLLERRPDIAEAKANLIAANANVRGAIAAF 340 Query: 300 YPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +PS++L GS F +T S + PIF+ G + +R + ++ +E Sbjct: 341 FPSITLTGSGGWQSKALNLLFAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVA 400 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++ V+ A +VE A+T++ Q AV + ++ + R G + +L+ Sbjct: 401 KYEQAVVQAFTDVETAMTALRYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLN 460 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E+ E L + + V+LY A+G G+ Sbjct: 461 AEQTLLSDETTLVTTRLTRLDAAVNLYKAMGGGWT 495 >gi|331018638|gb|EGH98694.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 462 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 189/422 (44%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSAELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + ++L +F G+ + L L + + + + Sbjct: 168 LLSNVADRYAQTLAAREQGRIAGLNLANAQSVLKLVQTRFDSGSATALELAQQKNLVATQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + +++ F + I G+P++L+ R Sbjct: 228 QRELPRIQQLANEQLITLAALLGQP----VQHLKLSDQGFDTLNWPDIGAGVPSELLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +L + A + +A++ + P L+L+ + + + S L PI Sbjct: 284 PDLAKAEAELTAAEANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 + G++ + RA + QE T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 344 LNNGRLGAERDRALARQQELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 400 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 401 QAQTAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARVQ---TSIALYKALGG 457 Query: 449 GY 450 G+ Sbjct: 458 GW 459 >gi|311748361|ref|ZP_07722146.1| outer membrane efflux protein [Algoriphagus sp. PR1] gi|311302779|gb|EAZ81118.2| outer membrane efflux protein [Algoriphagus sp. PR1] Length = 477 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 95/449 (21%), Positives = 200/449 (44%), Gaps = 46/449 (10%) Query: 37 SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL 96 S S++ T+ W + F D L L+ AL N + + I A+ + + + ++ Sbjct: 39 SFNGSQDTTTSATIAWQDYFKDPYLKALIDTALNNNQELNITLQEIQFAQTEVRARKGEI 98 Query: 97 FPSSYASISHRFIPNLKTNSTGQLDSD-----------------------WKIDLFGQRR 133 PS + S G D++ W++D++ + R Sbjct: 99 LPSVDIGAGAGVDKVGRYTSQGANDANTEIKPGEEMPEPLQDYMLGANATWEVDIWKKLR 158 Query: 134 HIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 + + ++L ++ + N+IS++ SY + ++ I Q +++ +++ Sbjct: 159 NAKKAALTRYLASIEGKNFMVTNLISEISRSYYELLALDNQLEIIQQNIEIQTNALDIVK 218 Query: 193 LKFTQGATSKLSLVKLEAEI---KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYM 248 + ++L++ + EA++ KS++ DI ++ + I+ L+G YP + + Sbjct: 219 YQKEAARVTELAVRRFEAQVLDTKSLQFDI---QQKIVETENRINFLVGRYP--QHVARD 273 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 ++ + P+L + GIP+ L+ NRPDIR E +L + + +AK++ YPSL + Sbjct: 274 HREFTDLIPDL---VQSGIPSQLLANRPDIRQAELELEAAKIDVQVAKAEFYPSLRITAG 330 Query: 309 IALTHDNSFPG-------YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 + N+F G + +S +L P+ ++ IK+N A + + +++T Sbjct: 331 VGF---NAFKGSYLFTSPESLIYSLAGELTAPLINRNAIKANYIGANAKQIQAIYNYEQT 387 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 +LNA EV N L++I +K V +S+ +S ++ R +++L +R Sbjct: 388 ILNAYVEVVNQLSNIQNLEKSYRLRTQQVSALTESIDISNELFKNARADYMEVLLTQRDA 447 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + DL K + + V++Y A+G G+ Sbjct: 448 LEARFDLVETKMKQMNAKVNIYQALGGGW 476 >gi|221197762|ref|ZP_03570808.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD2M] gi|221204680|ref|ZP_03577697.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221175537|gb|EEE07967.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD2] gi|221181694|gb|EEE14095.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD2M] Length = 521 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 94/427 (22%), Positives = 191/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL N +I QA RI A I S R++L P + AS S Sbjct: 74 SLDWASQFGDPQLPKLIDEALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTR 133 Query: 108 --------FIPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVD 150 F P GQ S+ W++DL+G+ R + ++++ +A A + Sbjct: 134 ELYSANGLFPPPYG----GQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQ 189 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + S + +Y IA + + + +++ + + G + + Sbjct: 190 QARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARG 249 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 I + ++ + L+ + ++ LLG L + N ++ +P N+ PAD Sbjct: 250 NIATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQ-IAAPVLNPAGDVALPDNL--PAD 306 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWS-FG 327 L+ RPDI ++ ++ + AK++ +P ++L F + + + FG Sbjct: 307 LVSRRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFG 366 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + +I + + Q Sbjct: 367 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVAAIRAIDRQMGDAQ 426 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 427 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 483 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 484 ALGGGFD 490 >gi|221213157|ref|ZP_03586133.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221167370|gb|EED99840.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 493 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 94/427 (22%), Positives = 191/427 (44%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL N +I QA RI A I S R++L P + AS S Sbjct: 57 SLDWASQFGDPQLPKLIDEALAGNPSIAQAQARIAKASSYIESSRSNLLPKAEASYSWTR 116 Query: 108 --------FIPNLKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVD 150 F P GQ S+ W++DL+G+ R + ++++ +A A + Sbjct: 117 ELYSANGLFPPPYG----GQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQ 172 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + S + +Y IA + + + +++ + + G + + Sbjct: 173 QARITLASSVARTYNSLAQLYALRDIAQREIANRESVGKITDGRVSAGLDTNVERQTARG 232 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 I + ++ + L+ + ++ LLG L + N ++ +P N+ PAD Sbjct: 233 NIATTQASLSDLDGQITTVRYQLAALLGKGPDRGLQ-IAAPVLNPAGDVALPDNL--PAD 289 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWS-FG 327 L+ RPDI ++ ++ + AK++ +P ++L F + + + FG Sbjct: 290 LVSRRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGKFLNFTSRQAQFG 349 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + +I + + Q Sbjct: 350 PAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVAAIRAIDRQMGDAQ 409 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDIL--DIER-ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L D R A+ + +L + +R + + L Sbjct: 410 RALDASTRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QLALIK 466 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 467 ALGGGFD 473 >gi|254250110|ref|ZP_04943430.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124876611|gb|EAY66601.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 459 Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 92/401 (22%), Positives = 178/401 (44%), Gaps = 24/401 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 F+ VLLAGC G + +P ++ T WW SF D L+ L+ Sbjct: 15 FACATVLLAGC-AGARHDPLPAVAMPANWAA-PVAADAPAATGDWWRSFGDPQLDALIDD 72 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDS- 122 AL+ N + R+ A+ V +L P + ++S + + S+G S Sbjct: 73 ALRANNDLAIGAIRVYRAQLQAGLVDTNLTPNVTLGANGAVSRTLDTHQMSRSSGVNGSL 132 Query: 123 DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 ++IDL+G+ + +++ D+ A ++ A+L++I Y + +I++ + Sbjct: 133 SYEIDLWGRLAALRDAARWEADATAADLEAARLSLIGTTAALYWQIGYLNRQIALGDANI 192 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + L + T GA S L L + E + + + L + N H ++ + Sbjct: 193 AYAARTLALVRSRHTAGAVSGLDLAQAEQSLAAQRAAQTQLIQQRTENRHALAIMFDRSP 252 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + P+ + G+PA L+ RPD+R E +L +S+A++ ++ YP Sbjct: 253 QQRAAEPAALPDAAPPD----VAAGLPASLLGRRPDLRAAEFRLRESLAQVDATRTSFYP 308 Query: 302 SLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 + +L GS A T S T+ + G L LP ++ IR ++S +E + ++ Sbjct: 309 TFTLTGS-AGTTSTSLERVLTNPVGTLGLGLALPFIQWNTMQLQIRVSKSQYEEAVVGFR 367 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + A+ EVENAL++ ++Q E ++++SL+ Sbjct: 368 QRLYTALAEVENALSA---------RVQLEREAEQRALSLA 399 >gi|109900097|ref|YP_663352.1| RND efflux system outer membrane lipoprotein [Pseudoalteromonas atlantica T6c] gi|109702378|gb|ABG42298.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas atlantica T6c] Length = 462 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 197/454 (43%), Gaps = 34/454 (7%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--------WWESFNDTSLNKLVKIALQQ 71 + P+Y + +P+ + ++ SK L L W + ++ L +++++AL Sbjct: 1 MAPDYERSELPI-ASDWAQQQSKTLEQTSGLTSQKAAELPWRQFIHEPRLTQVIELALSS 59 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRF-------IPNLKTNSTGQLDSDW 124 N ++ + + +A+ +ADL+P A +S I L G S + Sbjct: 60 NRSLRETLADVESARATYRIQKADLYPQITAGLSGTRAKSSDGDISTLYQAEAGL--SGY 117 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAHQIL 181 +IDLFG+ R + S A++ S A + AK + +I ++ +++ +S+A + Sbjct: 118 EIDLFGKNRSL--SEADMQSYLASAETAKAAQIALIGEVANAWLTLASDSSLLSLAKETA 175 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP- 240 +K +E++ + G SK+ L + + SDI + +++ + L+G Sbjct: 176 ANAQKTMEITQKRLELGVDSKIDLASAQTVYHTARSDIASFNTQVEQDINALRLLVGQQI 235 Query: 241 -ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 AT + ++ + G+ +D++ RPD+ E L + A IG A++ Sbjct: 236 DATVLPSALPDDAD-----FVSDVPAGLSSDVLLQRPDVLSAEHDLKSANADIGAARAAF 290 Query: 300 YPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PSLSL + L D G ++ W+ P L +PIF G + + ++ Q+ Sbjct: 291 FPSLSLTATGGLASSVLADIFSGGASSIWTLAPSLNIPIFTGGANDAQLAFTQAQKQKFL 350 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 ++ T+ +A EV +AL ++ + + V +S LS+ Y+ G S + L Sbjct: 351 AAYEYTIQSAFSEVADALARKATIQEQLDAQEALVAAATRSYDLSLARYKGGVDSFQNAL 410 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +R L ++ + V LY +G G Sbjct: 411 EAQRTMYSASQTLISTRQTDLVNRVTLYRVLGGG 444 >gi|319786596|ref|YP_004146071.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoxanthomonas suwonensis 11-1] gi|317465108|gb|ADV26840.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoxanthomonas suwonensis 11-1] Length = 492 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 199/472 (42%), Gaps = 33/472 (6%) Query: 6 AIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFS---------IGNSKNLINIDTLKWWES 55 AI +LF+ L LAGC T P + + G + + WW + Sbjct: 13 AIGTLFLALALAGCA----STGGLQPAAQVRDADSHAVARSLAGATLSEAAFPAQDWWRA 68 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--IPN-- 111 F D L+ LV AL + +++ A R+ A+ A PS AS + +P Sbjct: 69 FGDPQLDALVAEALDGSPSLVAADARLRKARAQAGLAEAARKPSVGASAQYAVAQLPESL 128 Query: 112 --------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIP 162 L N+ L+ DW +D++G RR E++L ++ A+L + + + Sbjct: 129 AGDEIGGELMHNAVLMLNFDWPLDVWGGRRADYEAALGQARASEVDAQAARLALAANVSR 188 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI E +A + + ++ ++LS + G LSL E I S ++ Sbjct: 189 AYIALAQAFESQDLARREQERSERLLQLSRQRVDAGIDGALSLRNAEGAIASAKAQAEAA 248 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ LLG L + + P +P + P++L+ +RPD+ Sbjct: 249 RQQVDALRNTLAALLGKGPDRGLDIARPRLLQ-APAPTLPGTL--PSELLGHRPDVVAAR 305 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++ + I AK+ PS+ L+G + L + F G GP + LP+FD G Sbjct: 306 WRVEAAARGIDSAKATFKPSIDLSGLVGLASAGFSDLFDGDALLGFGGPAVSLPVFDAGA 365 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + + ++ + V+ A+ EV +A+ +I LQ A + ++ L Sbjct: 366 RRNRLDARNADYDLAVASYNQGVVEALHEVTDAVQAIRSLDAQERSLQDARASAEAALQL 425 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR G S L++L +R +VE L+ + Q + VDL A+G G + Sbjct: 426 AEGRYRAGIGSQLEVLAAQRPLLQVEQQLAALRAQRYLATVDLDRALGGGLS 477 >gi|255034773|ref|YP_003085394.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254947529|gb|ACT92229.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 477 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 101/471 (21%), Positives = 208/471 (44%), Gaps = 47/471 (9%) Query: 20 VGPEYTKPHMPLLPTQ-------FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +G Y+ ++P LP + S S++ N + W F D +LN L+ A + N Sbjct: 15 IGLTYSACNIPTLPQKTENKVVPVSFNGSQDSTNAAKVSWKSFFTDPNLNALIDTAFRNN 74 Query: 73 LTILQATERINAAKENILSVRADLFP-------------SSYASIS----------HRFI 109 + + I ++ I + + + P + Y +I R Sbjct: 75 QELNITMQEIAISQNEIGARKGEYLPFIGLRGGAGVEKAARYTNIGASEATTDIKPGRET 134 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDAR 168 P + Q + W++D++ + R+ + + A S+ + N+ +++ SY + Sbjct: 135 PEPLPDVNIQAVARWEVDIWHKLRNAKKAAATRYLSSIEGKNFMMTNLAAEIANSYYELL 194 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +++I Q +D+ +++ ++ ++L++ + EA++ ++ +++ Sbjct: 195 ALDTQLAIIRQNVDIQTNALKIVKMEKEATRVTELAVKRFEAQVLKTQNLQYGIQQRIVE 254 Query: 229 NVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + I+ L+G YP + + Q N PN+ + GIP+ L+ NRPDIR E L Sbjct: 255 TENRINFLVGRYP--QPVQRSQSGFENLVPNV---VQAGIPSQLLSNRPDIRQAELDLEA 309 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY------NTHWSFGPKLYLPIFDKGKI 340 + + +A+++ YPSL L+ S+ L +F P Y + S L P+ ++ I Sbjct: 310 AKIDVNVARANFYPSLGLSASLGL---QAFSPIYLARVPESIVGSLIGDLAAPVINRYAI 366 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ A + + ++ TVLNA EV N L++IN +K V+ +S ++S Sbjct: 367 RAGYANANARQIQAIYNYERTVLNAYIEVVNQLSNINNLEKSYDLKTKEVDALNQSTTIS 426 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + R +++L +R + +L K + + V++Y A+G G+N Sbjct: 427 NRLFASARADYMEVLLTQRDALESRFELIETKMRQMNAMVNIYRALGGGWN 477 >gi|10956846|ref|NP_049066.1| putative aromatic efflux pump outer membrane protein [Novosphingobium aromaticivorans] gi|146275513|ref|YP_001165674.1| RND efflux system outer membrane lipoprotein [Novosphingobium aromaticivorans DSM 12444] gi|3378279|gb|AAD03862.1| putative aromatic efflux pump outer membrane protein [Novosphingobium aromaticivorans] gi|145322204|gb|ABP64148.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium aromaticivorans DSM 12444] Length = 483 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 102/475 (21%), Positives = 207/475 (43%), Gaps = 34/475 (7%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFN 57 +L A +L ++ LAGC P+ P++ T +I ++ L +WW Sbjct: 5 LLAAPGALAVLALAGCVAVPDAGV--RPVMETADTIEAAQTLAARGNTTWPPDQWWRLAG 62 Query: 58 DTSLNKLVKIALQQ----------NLTILQATERINAAKENILSVRADLF---PSSYASI 104 D L L++ L +R+ AA+ + A+ S I Sbjct: 63 DPQLTALIEEGLSNAPQVAVAVARVRRAEAEAQRVGAARLPTIGAEAEGGLRRQSGNNGI 122 Query: 105 SHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI--SKL 160 +F+P+ GQ L + +DL+G+ R ++ + + A VD A+ ++ + Sbjct: 123 PAQFLPD-GWQDYGQTSLSFGFDLDLWGRNRAAYAAATSE-ARAAMVDAAQARLVLSVAI 180 Query: 161 IPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +Y + RH++ER + A + + + +L + G + SL + +AE+ E D+ Sbjct: 181 TAAYAELGRHYRERDNAAATLAN-RRLMRDLVAQRQRNGLDNLASLRRADAEVALAEQDL 239 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++++ + + ++ LLG + P+ + G+ DL+ RPDI Sbjct: 240 AAVDENIGIRRNQLAALLGAGPDRGTSITRLP---LAPSTPGGVPAGVTTDLLGRRPDIV 296 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFD 336 +++ + +++ +A++ +PS++L I AL N + S GP + LPIF Sbjct: 297 AARERVEAAASRVKVARAGFFPSINLRALIGLQALGLGNLVASGSLFGSVGPAISLPIFQ 356 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +K+ AE++ E + +TV+ A ++ +A+T + K + + A+ +++ Sbjct: 357 GGALKAQYGSAEAAYDEAVANYNQTVVTAYQQAADAVTQRDAADKRLGATRTALAASEEA 416 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L Y G S LD+L ER + V + + + + + A+G G++ Sbjct: 417 LGLVRTRYEAGLASYLDVLASERGVQDLRVAVIGLETYERGATLAMIRALGGGFD 471 >gi|241662819|ref|YP_002981179.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12D] gi|240864846|gb|ACS62507.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12D] Length = 509 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 101/472 (21%), Positives = 216/472 (45%), Gaps = 35/472 (7%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINID----TLKWWESFNDTS 60 A+ ++ + +LAGC +G ++ L T + ++++L + +L W + FND Sbjct: 31 ALSAVTLAVLAGCANLGNSHSTQT---LTTPGQLASTQSLPSQGGQWPSLNWVDQFNDPQ 87 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLK----- 113 L LV A++ N + A R+ A++ VR +L+PS A ++ + + Sbjct: 88 LRALVDEAIKDNPNLQVAFARVRASRAMADVVRGNLYPSVGLDADMTRQRLSEYDMFEGT 147 Query: 114 -------TNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T S QL + +D +G+ R +E++L++ + A+ ++L + + + +Y Sbjct: 148 PLAGRWFTESKIQLGVSYDLDFWGKNRSALEAALSDDKAMEAESQASRLMLSTTVARTYA 207 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +A + + K L+ + G +++ + A + + ++++ +++ Sbjct: 208 KLAALYAQRDVAERAIVQRKDLTSLAGQRLRAGLDTQVETTQARANVAAAQTELEQVDEQ 267 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ LLG L + + + Q +P N+ I DLI RPD+ ++ Sbjct: 268 ITLARNQLAALLGKGPDRGLA-IARPTLLAQATPKLPNNLTI--DLIGRRPDLVAARWRV 324 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + I +AK+ P +SL + L +N G + GP L LPIF GK+++ Sbjct: 325 EAASKDIDVAKAQFLPDISLTAFLGLASIAPENLLLGASRQLGIGPALKLPIFQGGKLRA 384 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+R ++ ++ +T+ A+ + + +T+++ + + A+ +++ SL+ Sbjct: 385 NLRGKYANYDAAVASYNQTLTEALHDTADQITALHSIDAQIAIQRTALSEAERAYSLART 444 Query: 403 NYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + L +L+ E K+ DL A+R A+ + L A+G GY Sbjct: 445 RYSAGLGTQLVVLNAETTVLQQRKLATDLQ-ARRLDAQ--MALIKALGGGYT 493 >gi|91783846|ref|YP_559052.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91687800|gb|ABE31000.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 498 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 100/434 (23%), Positives = 187/434 (43%), Gaps = 55/434 (12%) Query: 15 LAGCTVGPEYTKPHMP-------------LLPTQ-----FSIGNSKNLINIDTLKWWESF 56 LA C+ GP P MP +P Q F +G +WW+ + Sbjct: 22 LAACSFGPGGEPPAMPQPAHYGAEAQPAQTVPAQGVTQQFVVGAKP------VPEWWKLY 75 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF--IP 110 +LN LV L+ + T+ + AA+E + + + + + P+ A + +R IP Sbjct: 76 QSDALNALVDEGLRSSPTLAATDRSLAAAREQLRAQIGSSMLPTIDAGGQATRNRALAIP 135 Query: 111 NLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPS 163 + N+ GQL + + DLFG R +++LA + A Q D A+ + + ++ + Sbjct: 136 EIGPNTFLYNVFVGQLQAHYTFDLFGAARLADAALAARVNVQAYQFDAARRALAANIVTA 195 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I + +I +++ + + ++ GA S + + S+ + +P L+ Sbjct: 196 AITSAALHAQIETTERLVTIANDQARDTQRRYALGAVSHADQLSAQQSAASLSASLPGLK 255 Query: 224 KSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + H ++ LLG A E L Q P + ++L+R+RPDI+ Sbjct: 256 QQWLSTRHALAVLLGRTPDAAPEDLALAQLHVPEQVPVVVP-------SELLRSRPDIQA 308 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + L + A +G+A + +YPSLSL+ S+ + + G WS G L P+F Sbjct: 309 ADAALKAAAADVGVATAQMYPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHG 368 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G + + R A + +++TVL A + V + L ++ D + + A + +S Sbjct: 369 GALVAQRRAALDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQAL----DAANIAARS- 423 Query: 398 SLSMINYRQGRYSL 411 + + + GRY L Sbjct: 424 AQGIFDETSGRYRL 437 >gi|254236794|ref|ZP_04930117.1| hypothetical protein PACG_02807 [Pseudomonas aeruginosa C3719] gi|126168725|gb|EAZ54236.1| hypothetical protein PACG_02807 [Pseudomonas aeruginosa C3719] Length = 496 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 91/444 (20%), Positives = 196/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + PE L T +I + +WW+ + D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPEAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 245 IQLTRNLLAALAGKGPGEG-RTIRRPSLNLAAQPSLP--SALPAELLGRRPDVVARRWQV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 302 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 361 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + V + Sbjct: 362 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---TVASAQ 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 416 KTYDIATLAYQRGLTDYLNVLNAQ 439 >gi|254177875|ref|ZP_04884530.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei ATCC 10399] gi|160698914|gb|EDP88884.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei ATCC 10399] Length = 579 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 100/479 (20%), Positives = 208/479 (43%), Gaps = 41/479 (8%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G++++ + A + + + +T++ A+K++ + + ++ AV Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAV 412 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++S LS + +G +++L + + + + + ++ L +A+G G Sbjct: 413 SLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGG 471 >gi|124385252|ref|YP_001026412.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei NCTC 10229] gi|126451369|ref|YP_001080315.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei NCTC 10247] gi|254358682|ref|ZP_04974955.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei 2002721280] gi|124293272|gb|ABN02541.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei NCTC 10229] gi|126244239|gb|ABO07332.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei NCTC 10247] gi|148027809|gb|EDK85830.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei 2002721280] Length = 582 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 100/479 (20%), Positives = 208/479 (43%), Gaps = 41/479 (8%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G++++ + A + + + +T++ A+K++ + + ++ AV Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAV 412 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++S LS + +G +++L + + + + + ++ L +A+G G Sbjct: 413 SLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGG 471 >gi|121598189|ref|YP_992799.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei SAVP1] gi|121226999|gb|ABM49517.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia mallei SAVP1] Length = 576 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 100/479 (20%), Positives = 208/479 (43%), Gaps = 41/479 (8%) Query: 4 LRAIFSLFIV----LLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 +R +L ++ ++AGC V P+ + L +I ++ WW + Sbjct: 1 MRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAERDAGWPAADWWRA 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIP--- 110 + D L+ + +L N ++ A R+ A+ A+ P ++S + P Sbjct: 61 YRDPQLDSWIVASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNV 120 Query: 111 --------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 N T N+TG L + +DL+G+ +H E +L + A A+L + + + Sbjct: 121 YYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANV 180 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y+D + IAH + EL+ + G ++L + + EA + I Sbjct: 181 VRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYSRQID 240 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRP 276 + E++ ++ H ++ L G ++ +P L + N +P A+L+ RP Sbjct: 241 SYEEAIQLGRHQLAALAGKGPG-------AGASLARPKLALDANAALPSALPAELLGRRP 293 Query: 277 DIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKL 330 DI + + D+ A+ I +AK+ YP++ SL G +++ N WS GP L Sbjct: 294 DI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPAL 352 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G++++ + A + + + +T++ A+K++ + + ++ AV Sbjct: 353 TLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAV 412 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L ++S LS + +G +++L + + + + + ++ L +A+G G Sbjct: 413 SLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQENQTRIEAARLAAHASLMVALGGG 471 >gi|160899179|ref|YP_001564761.1| RND efflux system outer membrane lipoprotein [Delftia acidovorans SPH-1] gi|160364763|gb|ABX36376.1| RND efflux system, outer membrane lipoprotein, NodT family [Delftia acidovorans SPH-1] Length = 491 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 104/449 (23%), Positives = 199/449 (44%), Gaps = 48/449 (10%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN------AA 85 L Q G++ +L D WW+S D L+ L+ ALQ + ++ + R + A Sbjct: 51 LTAQSETGSNTSLPAAD---WWKSLGDAQLDALIAQALQGSPSLAMSRARFDKAAALATA 107 Query: 86 KENILSVRADLFPSSYAS--ISHRFIPN---LKTNSTGQLDSD--WKIDLFGQRRH---I 135 VR L + ++ +P T +TG L + W D FG RH + Sbjct: 108 TSTATDVRGTLGVDATRQHYSANGLVPAPIAGHTYNTGNLQAGLSWTPDFFG--RHAADL 165 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 +++L +A A A + +++ SY+ + +A + L + ++LS + Sbjct: 166 QAALGQARAAQADSAAAANQLAAQVARSYVALARLIAQKDVAGRTLTQRQSLLDLSQQRT 225 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEF-----LHYMQ 249 G S++ L + +A + + I L++ + I+ L G P + L +Q Sbjct: 226 RAGLDSQVELTQAQAGLPDAGTQIEMLDEQITLARRTIAVLCGQAPEAQLQLSPRLAALQ 285 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 Q+ +P +G ADL+ RPD+ ++ + I A++D YP ++L I Sbjct: 286 IQA--------VPGQLG--ADLLGRRPDVVAARWRVESATQGIESARADFYPDINLTAFI 335 Query: 310 ALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 L DN F G + P L LP+FD ++++ +R ++ + VL+A+ Sbjct: 336 GLNAIGLDNLFKGSSRQMGITPALRLPLFDGKRLRAQLRGTQADLDTAIAQYNGVVLDAV 395 Query: 367 KEVENALTSINEDKKIVTKLQ---HAVELHKKSMSLSMINYRQGRYSLLDILDIE-RATA 422 KE +A+TS+ + +V + Q ++E +++ ++ Y+ G S + +L+ E + Sbjct: 396 KEAGDAITSV---QSLVRQQQLQAESLEKAERAYDFAVQRYKAGLASQVTVLNTETQVIT 452 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +D+ + R L + V L A+G G+ Sbjct: 453 QRRLDVDLRARAL-DTRVSLMKALGGGWT 480 >gi|125568862|gb|EAZ10377.1| hypothetical protein OsJ_00213 [Oryza sativa Japonica Group] Length = 628 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 34/417 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHRFI 109 WW F D L++LV AL N + A + +P++ S+ HR Sbjct: 220 WWTGFGDERLDRLVAQALAANSDLAAA-----GPGRAAFAPAGRPWPATRCGRSLRHRAS 274 Query: 110 PNL------------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLN 155 + ++ STG + W++DL+G R + +A ++ ++ D L Sbjct: 275 AAMPAAPPDQADEWRRSYSTG-VSLGWEVDLWG-RLRTQRDIARWEAEASEEDRQNTALL 332 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 VIS I Y + + + I+ L+ ++ EL +F GA S+L + + ++S Sbjct: 333 VISDTITQYWNLAYLNQSIATGQANLERLERTRELVQARFDAGAVSRLEVRQALQNLQSQ 392 Query: 216 ESDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + LE+ R+ V N +L G P + Q + + I G+PADL+ Sbjct: 393 RASQSALEQQ-RVEVRNALAVLLDGTPWPQ-----QDEPQDLLGARSPRIVEGLPADLLG 446 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLY 331 RPD+R E +L +S+ I + + YP+LSL GS+ + S N + G L Sbjct: 447 RRPDLRAAELRLRNSLKTIRVTATQYYPALSLTGSLG-SSAASLGDVLRNPVATLGAGLS 505 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP + + + + A +S Q +++T+ A+ EV+NAL++ + + V Q + E Sbjct: 506 LPFLNLQRAQLDTDIAGTSYQIAATNFRKTLYTALSEVDNALSAREQLARQVAASQASYE 565 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + YR G L L+ ++ E+ L+ ++ + V L+ A+G Sbjct: 566 EAVEVERAQEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQGQLNNDVTLFKALGG 622 >gi|237709036|ref|ZP_04539517.1| outer membrane protein [Bacteroides sp. 9_1_42FAA] gi|229457098|gb|EEO62819.1| outer membrane protein [Bacteroides sp. 9_1_42FAA] Length = 481 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 110/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I +L W F DT L + Sbjct: 12 IMGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSLSWKTFFPDTLLQSYIA 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N T LQ ERI+ A+ + + L P I RF Sbjct: 70 EALNNNHTFLQTIERISVARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 129 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ D++G+ S+++ + + +A+ +IS+ Sbjct: 130 PDLEKDKHIPDPYRNFNLGLNFQWEADIWGKLTDKKRSAVSRWMQSVEAMRLARTLLISE 189 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 190 VGTHYFELIGLDKQRYVLREAILTARDAYNLTNEL----MKEGEVTRLSVDQFRSRRLKL 245 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 246 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 301 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 302 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 361 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + ETVL A +EV N +T+ ++ + + Sbjct: 362 APIFKQNTIRALWNDAKSQQRIALLGYHETVLKAYEEVLNLITASSQMHQRKELKEEESR 421 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 422 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 481 >gi|288800553|ref|ZP_06406011.1| outer membrane efflux family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332766|gb|EFC71246.1| outer membrane efflux family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 474 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 103/455 (22%), Positives = 205/455 (45%), Gaps = 56/455 (12%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESF-NDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 LPTQ+ N L T W+ F D L L+ AL N + ++I AK ++ Sbjct: 36 LPTQY---NGDTLTAKTTPTSWKMFFTDPQLKALIDSALVNNQDLKITLQQIAVAKSGMI 92 Query: 91 SVRADLFPS-----------------------SYASISHRFIPNLKTNSTGQLDSDWKID 127 + + + PS S + IP+ N DW++D Sbjct: 93 AAKGAMLPSLSVGAEVGVSKAGRYTSEGAGNASTEMTPGKLIPDPLMNYHPGFAFDWELD 152 Query: 128 LFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 LFG+ + +E LA L+ A + ++IS++ +Y ++++ + +D Sbjct: 153 LFGKLKSSKKAAVERYLATLEGQNA----VRASLISQVASNYYTLLALDNKLTLIRKYID 208 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPA 241 L ++ +++ ++ + ++L++ K +AE+ S L++ + ++ LLG YP Sbjct: 209 LQRQAEKIAEIQKEADSDTELAVEKFKAELAKARSQEFVLKQEITECENALNLLLGRYPT 268 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 +Q+ + + IG+P++L+ +RPDIR E +LA + + A+ P Sbjct: 269 P-----IQRDAKQLLNEDVKMVVIGLPSNLLSHRPDIRQAEHELAAAHWDVEAARKAFLP 323 Query: 302 SLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S++++ ++ L N P Y T +S L P+ ++ I++N ++A+++ + Sbjct: 324 SVNISATLGLEAFN--PTYLTRTPKSLAYSVVGGLTAPLINRKAIEANFQQADAAQLQAL 381 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKL---QHAVELHKKSMSLSMINYRQGRYSLL 412 + + +L A EV T +++ K +V + V+ + S+ +S Y GR + L Sbjct: 382 YEYDKILLTAYSEV---CTLLSKHKNLVAYYALKEEEVKTLENSVEVSRQLYMNGRATYL 438 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D+L ER +++L ++Q VDLY ++G Sbjct: 439 DVLGAERDALDAQMELLETRQQQLSCVVDLYRSLG 473 >gi|261364424|ref|ZP_05977307.1| outer membrane efflux protein [Neisseria mucosa ATCC 25996] gi|288567331|gb|EFC88891.1| outer membrane efflux protein [Neisseria mucosa ATCC 25996] Length = 529 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 109/487 (22%), Positives = 202/487 (41%), Gaps = 64/487 (13%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F L L +GC P++T + T +S+ I +WW + ND L+ L+ Sbjct: 60 LFFLCAALFSGCATHPKHTPAAVETAETLGLPASSQPPI---APQWWRALNDAKLDSLID 116 Query: 67 IALQQ------------------NLTILQATERINAAKENIL----SVRADLFPSSYASI 104 AL + +L Q +I L V P + + Sbjct: 117 TALARSPDLAAAQARLRQAQAGADLADSQRGVKIGLGLSGALLHRDGVNEREKPELISDL 176 Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 R + + TN T QL W D+FG+ +H +E++L + ++ +L ++++ Sbjct: 177 EKRLLGDHGTNITYESLQLQGQWSPDVFGKYKHQLEAALGQQRAVEYEIAQTRL-LLAQG 235 Query: 161 IPSYIDARHF----KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV-----KLEAE 211 + +Y ++R++ Q L+ ++ + ++ Q A SKL V + +A Sbjct: 236 VATYYRQWQLLLETRQRVAQRAQ-LNREREQVVRELIRAGQLAPSKLYAVQQGNSRFQAA 294 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + ++ +I + H ++ L G PA + + N N P + ADL Sbjct: 295 LSDLDGNIAQVR-------HALAALTGQPAQALDTF----TPNPAANTPAPPVSQLTADL 343 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPGYNTH 323 + RPD+ Q + L + AK++ YP++++ L+ H +SF Sbjct: 344 LGKRPDLAAQREALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFLA---- 399 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 P + LPIF G +++N+ R E+ EQ + + V A++E +ALT V Sbjct: 400 -GLLPSVSLPIFTSGTLRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYETAAAAV 458 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 L +K+ + + YR G + LD L + T + E L+ A+ +L +++ L Sbjct: 459 RDQTEMTALARKNAAAAQSRYRAGLDNKLDWLAAQDETLQNEAQLAQAQAKLFTAWLALN 518 Query: 444 IAIGSGY 450 A G G+ Sbjct: 519 TAFGGGF 525 >gi|167914868|ref|ZP_02501959.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 112] Length = 343 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 144/309 (46%), Gaps = 20/309 (6%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++++++ + Y+ + + + L + + +L+ L+F G S+L L + + Sbjct: 8 AEISLVASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTV 67 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +++ + ++ ++ + L+G P + L N Q NL I G+P+DL Sbjct: 68 VETALASQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDL 124 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDI E+ L + A IG A++ +P +SL G+ + T F WSF P Sbjct: 125 LTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAP 184 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF+ G+ +N+ A + + +++ + +A +EV + L + + + L+ Sbjct: 185 NIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLATRGTYDQQIAALER 244 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVD 441 ++ LS + YR G S L +L + DL A++QL + VD Sbjct: 245 NEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWTNLVD 297 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 298 LYRALGGGW 306 >gi|212692097|ref|ZP_03300225.1| hypothetical protein BACDOR_01592 [Bacteroides dorei DSM 17855] gi|237724629|ref|ZP_04555110.1| outer membrane protein [Bacteroides sp. D4] gi|265755537|ref|ZP_06090158.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] gi|212665489|gb|EEB26061.1| hypothetical protein BACDOR_01592 [Bacteroides dorei DSM 17855] gi|229436824|gb|EEO46901.1| outer membrane protein [Bacteroides dorei 5_1_36/D4] gi|263234143|gb|EEZ19736.1| outer membrane protein [Bacteroides sp. 3_1_33FAA] Length = 485 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 110/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I +L W F DT L + Sbjct: 16 IMGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSLSWKTFFPDTLLQSYIA 73 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N T LQ ERI+ A+ + + L P I RF Sbjct: 74 EALNNNHTFLQTIERISVARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 133 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ D++G+ S+++ + + +A+ +IS+ Sbjct: 134 PDLEKDKHIPDPYRNFNLGLNFQWEADIWGKLTDKKRSAVSRWMQSVEAMRLARTLLISE 193 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 194 VGTHYFELIGLDKQRYVLREAILTARDAYNLTNEL----MKEGEVTRLSVDQFRSRRLKL 249 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 250 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 305 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 306 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 365 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + ETVL A +EV N +T+ ++ + + Sbjct: 366 APIFKQNTIRALWNDAKSQQRIALLGYHETVLKAYEEVLNLITASSQMHQRKELKEEESR 425 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 426 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 485 >gi|167620307|ref|ZP_02388938.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia thailandensis Bt4] Length = 499 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 93/425 (21%), Positives = 188/425 (44%), Gaps = 37/425 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDAWIAASLAGNPSLAAAQARVREAQSLARVAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ + + + +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKNNAQRALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +YID + IAH D + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYIDFAKNYALLDIAHATYDRQNELAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N G+P A+LI Sbjct: 216 RQIDSYEEAIQLGRHQLAALAG-------KGPGAGASLGRPKLALDANAGLPSALPAELI 268 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFG 327 RPD+ + I +AK+ YP++ SL G +++ N WS G Sbjct: 269 GRRPDVVAARWTVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAG 328 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVT 384 P L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 329 PALTLPIFEGGRLRAQLGVAAAGYDQAVEHYNQTIVGALKDIADNVVRLRSLDSQQKDAA 388 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + AV L ++S LS + +G +++L + + + + + ++ L Sbjct: 389 R---AVSLTRRSYDLSHTGFSRGLTDYVNVLIAQSQLLTAQENQTRVEAARLAAHASLMA 445 Query: 445 AIGSG 449 A+G G Sbjct: 446 ALGGG 450 >gi|167620242|ref|ZP_02388873.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 499 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 186/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------- 98 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLPPKADAKYSWTR 117 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 SS A + F + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSSNALVPPPFGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADMQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAEREISNRQTVGKITDGRVGAGLDTNVERQTALGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + P + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSPGGGVALPDNLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L + ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGLGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T+++A+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLVSALNDVATQVASIRSIDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|58581622|ref|YP_200638.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426216|gb|AAW75253.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 505 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 90/426 (21%), Positives = 187/426 (43%), Gaps = 37/426 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP- 110 WW + D L+ L+ LQ + ++ A R++ + I + +A+ PS S + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLAAADARLHRVQARIDTAQANRGPSLSVSGGYTGLQL 133 Query: 111 ---------NLKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 K + QL +++ +DL+G +R E+++ +A A+LN+ S Sbjct: 134 PESLVGEEIGGKYGGSAQLALEFRYGVDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSS 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + +A+ L +K +EL+ + + G S+L +++ ++ Sbjct: 194 AIAEGYAQLAYAWSLHDLANDELGRAQKLLELTRQRRSAGIDSEL-------QVRQAQAR 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------IPA 269 +P ++ + I A L + Q + ++ P+ G +PA Sbjct: 247 VPAAQQQLQSAQQQIDE-----ARTALAALVGQGPDRGLDIARPVLGGGIATQLPSMLPA 301 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-- 327 DL+ RPD+ ++ + I +AK+ YPSL+L + + + ++ FG Sbjct: 302 DLLGRRPDVVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLDSGSVFGLV 361 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L LPIFD GK+++N+ +++ + + V++A++EV + +T++ ++ Sbjct: 362 APALSLPIFDGGKLRANLAGSDAQYDLAVADYNQKVISALREVADQVTAVRSLQQRAQAQ 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV+ + L+ YR G S L++L ++ ++ + Q + V L A+ Sbjct: 422 NDAVQTAMAAFDLAQQRYRAGIGSYLEVLRVQEQVLVARQRMAGLQSQQLLASVRLQRAL 481 Query: 447 GSGYNP 452 G + P Sbjct: 482 GGEFTP 487 >gi|187928217|ref|YP_001898704.1| NodT family RND efflux system outer membrane lipoprotein [Ralstonia pickettii 12J] gi|187725107|gb|ACD26272.1| RND efflux system, outer membrane lipoprotein, NodT family [Ralstonia pickettii 12J] Length = 509 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 101/469 (21%), Positives = 214/469 (45%), Gaps = 31/469 (6%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLN 62 A+ ++ + +LAGC +G ++ + P Q + S + W + F+D L Sbjct: 31 ALSAVTLAVLAGCANLGNSHSTQTL-TTPGQLASAQSLPSEGGQWPSQNWVDQFDDPQLR 89 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLK------- 113 LV A++ N + A R+ A++ VR +L+PS A ++ + + Sbjct: 90 ALVDEAIKDNPNLQVAFARVRASRAMADVVRGNLYPSVGLDADMTRQRLSEYDMFEGTPL 149 Query: 114 -----TNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 T S QL + +D +G+ R +E++L++ S A+ ++L + + + +Y Sbjct: 150 AGRWFTESKIQLGVSYDLDFWGKNRSALEAALSDDKSIEAESQASRLMLSTTVARTYAKL 209 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + +A + + K L+ + G +++ + A + + ++++ +++ Sbjct: 210 AALYAQRDVAERSIAQRKDLTNLAGQRLRAGLDTQVETTQARANVAAAQTELEQVDEQIT 269 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + ++ LLG L + + + Q +P N+ I DLI RPD+ ++ Sbjct: 270 LARNQLAALLGKGPDRGL-TIARPTLLAQATPKLPNNLTI--DLIGRRPDLVAARWRVEA 326 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + I +AK+ P +SL G ++ +N G + GP L LPIF+ GK+++N+ Sbjct: 327 ASKDIDVAKAQFLPDISLTAFLGLASIAPENLLLGASRQLGIGPALKLPIFEGGKLRANL 386 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R ++ ++ +T+ A+ + + +T+++ +T + A+ +++ SL+ Y Sbjct: 387 RGKYANYDAAVASYNQTLTEALHDTADQITTLHSIDSQITIQRTALSEAERAYSLARTRY 446 Query: 405 RQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + L +L+ E K+ DL A+R A+ + L A+G GY Sbjct: 447 SAGLGTQLVVLNAETTVLQQRKLATDLQ-ARRLDAQ--MALIKALGGGY 492 >gi|188577138|ref|YP_001914067.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521590|gb|ACD59535.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 505 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/426 (21%), Positives = 187/426 (43%), Gaps = 37/426 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP- 110 WW + D L+ L+ LQ + ++ A R++ + I + +A+ PS S + + Sbjct: 74 WWRALGDAQLDALIAEGLQHSPSLAAADARLHRVQARIDTAQANRGPSLSVSGGYTGLQL 133 Query: 111 ---------NLKTNSTGQLDSDWK--IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 K + QL +++ +DL+G +R E+++ +A A+LN+ S Sbjct: 134 PESLVGEEIGGKYGGSAQLALEFRYGVDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSS 193 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + +A+ L +K +EL+ + + G S+L +++ ++ Sbjct: 194 AIAEGYAQLAYAWSLHDLANDELGRAQKLLELTRQRRSAGIDSEL-------QVRQAQAR 246 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---------IPA 269 +P ++ + I A L + Q + ++ P+ G +PA Sbjct: 247 VPAAQQQLQSAQQQIDE-----ARTALAALVGQGPDRGLDIARPVLGGGIATQLPSMLPA 301 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-- 327 DL+ RPD+ ++ + I +AK+ YPSL+L + + + ++ FG Sbjct: 302 DLLGRRPDVVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLDSGSVFGLV 361 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L LPIFD GK+++N+ +++ + + V++A++EV + +T++ ++ Sbjct: 362 APALSLPIFDGGKLRANLAGSDAQYDLAVADYNQKVISALREVADQVTAVRSLQQRAQAQ 421 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV+ + L+ YR G S L++L ++ ++ + Q + V L A+ Sbjct: 422 NDAVQTAMAAFDLAQQRYRAGIGSYLEVLRVQEQVLVARQRMAGLQSQQLLASVRLQRAL 481 Query: 447 GSGYNP 452 G + P Sbjct: 482 GGEFTP 487 >gi|89891868|ref|ZP_01203369.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacteria bacterium BBFL7] gi|89515773|gb|EAS18574.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacteria bacterium BBFL7] Length = 472 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 110/465 (23%), Positives = 211/465 (45%), Gaps = 27/465 (5%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESFNDTSL 61 A+ + + L C V +Y +P + TQ ++ + NL I+I + W F D L Sbjct: 14 ALILVVALTLQSCFVAQDYVRPDIDA-ETQ-ALYRTDNLPTDSISIADVSWKNLFTDQYL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNS-- 116 + ++ LQ N+ + A ++I AA+ +A PS ++ F N + S Sbjct: 72 QQYIEEGLQNNMDVRIALQQILAAQAYAKQGKAGYLPSVNVGANYTRQEFSENSQFGSIF 131 Query: 117 TGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 +G LD+ W+ D++G+ R + ++ A + A K ++S + +Y + Sbjct: 132 SGGLDTYDITADLSWEADIWGKIRSNKRATRAAYLQSVAGHQAVKTQLVSSIANTYYNLL 191 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ + Q + ++ G +++++ + A+ S + +E + Sbjct: 192 ALDAQLEVTKQTIVTRDSSVTTIKALKDAGQVTQVAVDQNIAQYNSARALQVDIEVAIFK 251 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + +S LLG F ++ S + Q N+ I +G+PA L+ NRPD+ E L +S Sbjct: 252 TENTLSILLGKSPQTF----ERSSLDIQ-NIDQDIVLGVPATLLSNRPDVMAAEYGLINS 306 Query: 289 VAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 +A+S+ YPSL+L G +L D + + L PIF++ KIK+ Sbjct: 307 FELTNVARSNFYPSLTLTASGGFQSLELDKLLNANSLFANLIGGLTQPIFNQRKIKTQKE 366 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A + ++ + +++T+L A EV NAL + + K ++ VE + + + S + Sbjct: 367 VALAQQEQALLEFKKTLLVAGSEVSNALYTYKAETKKFDFRKNEVEALRTAEANSNELLK 426 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G + LD+L + E+++ ++ Q S VDLY A+G G+ Sbjct: 427 NGYANYLDLLTARESALNAELNIIDSQLQQLVSIVDLYEALGGGW 471 >gi|257139370|ref|ZP_05587632.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia thailandensis E264] Length = 542 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 89/391 (22%), Positives = 176/391 (45%), Gaps = 37/391 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDAWIAASLAGNPSLAAAQARVREAQSLARVAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ + + + +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKNNAQRALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +YID + IAH D + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYIDFAKNYALLDIAHATYDRQNELAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLI 272 I + E++ ++ H ++ L G ++ +P L + N G+P A+LI Sbjct: 216 RQIDSYEEAIQLGRHQLAALAG-------KGPGAGASLGRPKLALDANAGLPSALPAELI 268 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFG 327 RPD+ + I +AK+ YP++ SL G +++ N WS G Sbjct: 269 GRRPDVVAARWTVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAG 328 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVT 384 P L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ +K Sbjct: 329 PALTLPIFEGGRLRAQLGVAAAGYDQAVEHYNQTIVGALKDIADNVVRLRSLDSQQKDAA 388 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + AV L ++S LS + +G +++L Sbjct: 389 R---AVSLTRRSYDLSHTGFSRGLTDYVNVL 416 >gi|15804672|ref|NP_290713.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H7 EDL933] gi|15834316|ref|NP_313089.1| outer membrane efflux protein MdtP [Escherichia coli O157:H7 str. Sakai] gi|168748067|ref|ZP_02773089.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4113] gi|168755258|ref|ZP_02780265.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4401] gi|168760937|ref|ZP_02785944.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4501] gi|168766347|ref|ZP_02791354.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4486] gi|168774446|ref|ZP_02799453.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4196] gi|168780500|ref|ZP_02805507.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4076] gi|168784704|ref|ZP_02809711.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC869] gi|168798252|ref|ZP_02823259.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC508] gi|195935867|ref|ZP_03081249.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H7 str. EC4024] gi|208808276|ref|ZP_03250613.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4206] gi|208813566|ref|ZP_03254895.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4045] gi|208818774|ref|ZP_03259094.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4042] gi|209399819|ref|YP_002273621.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4115] gi|217326143|ref|ZP_03442227.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. TW14588] gi|254796100|ref|YP_003080937.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H7 str. TW14359] gi|261225200|ref|ZP_05939481.1| predicted outer membrane factor of efflux pump [Escherichia coli O157:H7 str. FRIK2000] gi|261255548|ref|ZP_05948081.1| predicted outer membrane factor of efflux pump [Escherichia coli O157:H7 str. FRIK966] gi|291285496|ref|YP_003502314.1| Multidrug resistance outer membrane protein mdtP precursor [Escherichia coli O55:H7 str. CB9615] gi|73621211|sp|Q8X5R9|MDTP_ECO57 RecName: Full=Multidrug resistance outer membrane protein mdtP; Flags: Precursor gi|12519040|gb|AAG59278.1|AE005641_3 putative enzyme [Escherichia coli O157:H7 str. EDL933] gi|13364539|dbj|BAB38485.1| putative enzyme [Escherichia coli O157:H7 str. Sakai] gi|187769879|gb|EDU33723.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4196] gi|188017556|gb|EDU55678.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4113] gi|189001746|gb|EDU70732.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4076] gi|189357444|gb|EDU75863.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4401] gi|189364108|gb|EDU82527.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4486] gi|189368607|gb|EDU87023.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4501] gi|189374928|gb|EDU93344.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC869] gi|189379062|gb|EDU97478.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC508] gi|208728077|gb|EDZ77678.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4206] gi|208734843|gb|EDZ83530.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4045] gi|208738897|gb|EDZ86579.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4042] gi|209161219|gb|ACI38652.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4115] gi|209750998|gb|ACI73806.1| putative enzyme [Escherichia coli] gi|209751000|gb|ACI73807.1| putative enzyme [Escherichia coli] gi|209751002|gb|ACI73808.1| putative enzyme [Escherichia coli] gi|209751004|gb|ACI73809.1| putative enzyme [Escherichia coli] gi|209751006|gb|ACI73810.1| putative enzyme [Escherichia coli] gi|217322364|gb|EEC30788.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. TW14588] gi|254595500|gb|ACT74861.1| predicted outer membrane factor of efflux pump [Escherichia coli O157:H7 str. TW14359] gi|290765369|gb|ADD59330.1| Multidrug resistance outer membrane protein mdtP precursor [Escherichia coli O55:H7 str. CB9615] gi|320190790|gb|EFW65440.1| Outer membrane component of tripartite multidrug resistance system [Escherichia coli O157:H7 str. EC1212] gi|320638838|gb|EFX08484.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H7 str. G5101] gi|320644206|gb|EFX13271.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H- str. 493-89] gi|320649525|gb|EFX18049.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H- str. H 2687] gi|320654921|gb|EFX22882.1| putative outer membrane efflux protein MdtP [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660427|gb|EFX27888.1| putative outer membrane efflux protein MdtP [Escherichia coli O55:H7 str. USDA 5905] gi|326341870|gb|EGD65653.1| Outer membrane component of tripartite multidrug resistance system [Escherichia coli O157:H7 str. 1125] gi|326346556|gb|EGD70290.1| Outer membrane component of tripartite multidrug resistance system [Escherichia coli O157:H7 str. 1044] Length = 488 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVTAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++GSGY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGSGYQ 480 >gi|299139722|ref|ZP_07032895.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] gi|298598346|gb|EFI54511.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidobacterium sp. MP5ACTX8] Length = 491 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/400 (24%), Positives = 174/400 (43%), Gaps = 40/400 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPT--QFSIGNSKNLI-------NIDTLK--WWESFND 58 L + L GC VGP+Y P P P + S K N L+ WW FND Sbjct: 17 LSVFSLTGCMVGPKYKVPSAPAPPAYKEASPDAYKETADWHVASPNDAALRGAWWTVFND 76 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------- 105 LN L N T+ A + AA+ NI A+ +P+ S S Sbjct: 77 AELNTLEPQVETANQTLKAADANLRAARANIRVQNANRYPTIGVSPSVQGERESANQPYF 136 Query: 106 -HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N + N L ++++DL+G+ RR+I ++ + A L++ ++L Sbjct: 137 NSTIANNGEANLVVPLQVNYEVDLWGRIRRNIAAAKEESQATAADRQNVLLSLQTELALD 196 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE---SDIP 220 Y + R + + Y++ + ++ +F+ G K + + + ++++ + +D+ Sbjct: 197 YFELRSSDAEQKLLDDTVVQYQEALRVTSNRFSGGIAPKSDVTQAQTQLQAAKVQAADVA 256 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 F H I+ L+G P S P + P G+P+ L+ RPDI Sbjct: 257 VQRAQFE---HAIAILIGQPPASLTIPAAPISVELMPPVIPP---GLPSQLLERRPDIAA 310 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF----GPKLYLPIFD 336 E+++A + +IGIA++ +P+LSL+G +A S T SF GP L FD Sbjct: 311 AERRIAAANEQIGIARAAYFPTLSLSG-LAGYQSTSITSLFTPSSFVYGLGPTLGETFFD 369 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 G+ + A + ++ ++++VL A ++VE+ L ++ Sbjct: 370 GGRRRGVSEEAVAGYEQNAANYRQSVLTAYQQVEDNLVAL 409 >gi|317493088|ref|ZP_07951512.1| NodT family efflux transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919210|gb|EFV40545.1| NodT family efflux transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 478 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 99/472 (20%), Positives = 213/472 (45%), Gaps = 38/472 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLL-PTQFSIGNSKNLINID--TLKWWESFNDTSLNKL 64 F+LF LL+GC + + +P++ P Q + +L N D +WWE ++D LN L Sbjct: 15 FALF--LLSGCALIQD-DPGKVPIVNPQQAQLSQVIHLANSDWPAARWWEGYHDAQLNML 71 Query: 65 VKIALQQNLTILQATERINAAKENI------LSVRAD---------------LFPSSYAS 103 V ALQ + T+ A RI+ ++ + + ++A +P SY+ Sbjct: 72 VNRALQNSPTMQAARLRISQSQSTVELAQSAMGIQATAVAAQNRMRVTNKEFTWPYSYSL 131 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + P N+ G + + IDL+G R + +++ ++ A+ +L++ S + Sbjct: 132 PIDKNGPWYTLNTVG-VGATLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQ 190 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + ++I++ +Q+ D+ +++ + +G +++ +E+ + + + Sbjct: 191 LYFAMQSTYQQIALLNQLQDIASLSVQAHEQRTHRGLEDSVAIANARSELLAAQQQVIAA 250 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + L+G A H M P + + + +L+ RPD++ Sbjct: 251 NGTLTQYRETLRALMGADA----HSMPDIHPVELPAVQQTLPDSLSFELLARRPDLQALS 306 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + S++++ AK+ YP + G AL + F + P LYLPIFD G+ Sbjct: 307 GYVTASMSQVDAAKAAFYPHFDIKAFWGYNALNVGDLFKSSFQQINLLPGLYLPIFDGGR 366 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMS 398 + +N++ +++ + + VL+A+++V + + +N+ ++++ + Q E + S Sbjct: 367 LNANLKSVRTASNILIKQYNQAVLDAVRDVAMSSSQLNDLNQQVALQNQKVTEAMTVTQS 426 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S +Y++G S + R+T ++ L + Q + + L A+G GY Sbjct: 427 ASA-HYQRGLLSRYAAQEARRSTITQQLLLLDMRAQQLSTDITLIKALGGGY 477 >gi|221212514|ref|ZP_03585491.1| outer membrane protein OprM [Burkholderia multivorans CGD1] gi|221167613|gb|EEE00083.1| outer membrane protein OprM [Burkholderia multivorans CGD1] Length = 486 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 99/460 (21%), Positives = 193/460 (41%), Gaps = 43/460 (9%) Query: 22 PEYTKPHMPLL---PTQFSIGNSKN--------LINIDTLKWWESFNDTSLNKLVKIALQ 70 P Y +P P+ P+ + G + + + W + + D L KL+ +AL Sbjct: 21 PVYQRPAAPIAGTWPSGPAYGAASSPSAAGGAATPAAAEVGWRDFYRDPHLRKLIALALD 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-------GQLDSD 123 N + A ++ + RA L PS A+ + + N +++ T + Sbjct: 81 NNRDLRVAALQVAEYEAQYRITRAALAPSIDAAGA---LSNARSDGTITRSSSVSVGTTS 137 Query: 124 WKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 W+ID FG+ + ++ +L N S A +L++++ + Y+ R + + I+ Sbjct: 138 WEIDFFGRLQSLKRQALENYLSTDASRVSTQLSLVATVATDYLQLRADETMLKISTDTAA 197 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 ++ +L+ G+ S + + + + S ++ + + ++ + + +S +G Sbjct: 198 ADQRTYDLTAAMQKIGSASLQDVREAQTSLASAKASVASYTRAVAQDRNTLSAQIGCALP 257 Query: 243 EFLHYMQKQSNNFQPN-LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L S F + ++ I G+P++L+ RPDI E L + A IG A++ +P Sbjct: 258 DDLD---AGSALFDGDTMFADIGAGVPSELLTRRPDIVAAEHTLKAANANIGAARAAFFP 314 Query: 302 SLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 + L G+ + F W+F P + +PIFD G K+++ A + Sbjct: 315 KIELTATAGTASTGLTQLFKAGTGAWTFAPSITMPIFDYGSNKASLDVATIEKDIDVAEY 374 Query: 359 QETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++T+ A KEV NAL T + D+ V Q +L + YR G S Sbjct: 375 EKTIQTAFKEVANALAGRETYVTQVEADRDYVRSAQDYYDLAQA-------RYRAGTDSF 427 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +L +R + L + + V LY +G G++ Sbjct: 428 LTLLTAQRTLYTAQQQLVTDQLSKLSNLVTLYKVLGGGWS 467 >gi|296160084|ref|ZP_06842903.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295889558|gb|EFG69357.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 517 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 99/437 (22%), Positives = 191/437 (43%), Gaps = 43/437 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP--------LLPTQF--SIGNSKNLI--NIDTLKWW 53 A + LA C+ GP P MP PTQ + G ++ + +WW Sbjct: 13 AALTGMACALAACSFGPGGEPPAMPQPAHYGAEAQPTQTVPAQGVTQQFVVGAKPVPEWW 72 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF- 108 + + +LN LV L+ + T+ + + AA+E + + + + + P+ A + +R Sbjct: 73 KLYQSDTLNALVDEGLRNSPTLAATDKSLAAAREQLRAQIGSSMLPTIDAGGQATRNRAL 132 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKL 160 IP + N+ GQL + + DLFG R +++LA +D Q D A+ + + + Sbjct: 133 AIPEIGPNTFLYNVFVGQLQAHYTFDLFGAARLADAALAARVDVQAYQFDAARRALAANV 192 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I + +I +++ + + ++ GA S + + S+ + +P Sbjct: 193 VTAAITSAALHAQIETTERLVTIANDQARDTQRRYVLGAVSHADQLSAQQSAASLSASLP 252 Query: 221 TLEKSFRMNVHNISTLLGYP---ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 L++ + H ++ LLG A + L Q P + ++L+R RPD Sbjct: 253 GLKQQWLSTRHALAVLLGRTPDLAPDDLELAQLHVPEQVPVVVP-------SELLRARPD 305 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPI 334 I+ + L + A +G+A + ++PSLSL+ S+ + + G WS G L P+ Sbjct: 306 IQAADAALKAAAADVGVATAQMFPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPL 365 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G + + R A + +++TVL A + V + L ++ D + + A + Sbjct: 366 FHGGALFAQRRAAVDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQAL----DAANIAA 421 Query: 395 KSMSLSMINYRQGRYSL 411 +S + + + GRY L Sbjct: 422 RS-AQGVFDETSGRYRL 437 >gi|255067672|ref|ZP_05319527.1| outer membrane efflux protein [Neisseria sicca ATCC 29256] gi|255048013|gb|EET43477.1| outer membrane efflux protein [Neisseria sicca ATCC 29256] Length = 519 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 110/491 (22%), Positives = 202/491 (41%), Gaps = 72/491 (14%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F L L +GC P++T + T +S+ I +WW + ND L+ L+ Sbjct: 50 LFFLCAALFSGCATHPKHTPAAVETAETLGLPASSQPPI---APQWWRALNDAKLDSLID 106 Query: 67 IALQQ------------------NLTILQATERINAAKENIL----SVRADLFPSSYASI 104 AL + +L Q +I L V P + + Sbjct: 107 TALARSPDLAAAQARLRQAQAGADLADSQRGVKIGLGLSGALLHRDGVNEREKPELISDL 166 Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 R + + TN T QL W D+FG+ +H +E++L + ++ +L ++++ Sbjct: 167 EKRLLGDHGTNITYESLQLQGQWSPDVFGKYKHQLEAALGQQRAVEYEIAQTRL-LLAQG 225 Query: 161 IPSYIDARHF----KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV-----KLEAE 211 + +Y ++R++ Q L+ ++ + ++ Q A SKL V + +A Sbjct: 226 VATYYRQWQLLLETRQRVAQRAQ-LNREREQVVRELIRAGQLAPSKLYAVQQGNSRFQAA 284 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI----PINIGI 267 + ++ +I + H ++ L G PA + F PN P + Sbjct: 285 LSDLDGNIAQVR-------HALAALTGQPAQAL--------DTFTPNPATTTPAPPVSQL 329 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPG 319 ADL+ RPD+ Q + L + AK++ YP++++ L+ H +SF Sbjct: 330 TADLLGKRPDLAAQREALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFLA 389 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 P + LPIF G +++N+ R E+ EQ + + V A++E +ALT Sbjct: 390 -----GLLPSVSLPIFTSGTLRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYETA 444 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 V L +K+ + + YR G + LD L + T + E L+ A+ +L ++ Sbjct: 445 AAAVRDQTEMTALARKNAAAAQSRYRAGLDNKLDWLAAQDETLQNEAQLAQAQAKLFTAW 504 Query: 440 VDLYIAIGSGY 450 + L A G G+ Sbjct: 505 LALNTAFGGGF 515 >gi|237808501|ref|YP_002892941.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] gi|237500762|gb|ACQ93355.1| RND efflux system, outer membrane lipoprotein, NodT family [Tolumonas auensis DSM 9187] Length = 483 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/457 (21%), Positives = 202/457 (44%), Gaps = 29/457 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-------NIDTLKWWESFNDTSLNKLVKIAL 69 GC P+ +P L + +SK+L N WW F D LN L+ +L Sbjct: 18 GC-ASPDDIRPQNTLFGNNV-LTHSKSLTTDALSSANWPQQAWWLDFGDQDLNALIAESL 75 Query: 70 QQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLK----------TNST 117 + + + A+ R+N A + + + P S+ A++S ++ T+ + Sbjct: 76 KNSPDMQLASARLNQANAQVATADSQFDPTLSADANMSRARFSRMEDPLGEGNRYSTSRS 135 Query: 118 GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L ++ DL+G +R E+S+ N +A A++ + + + +YI + + Sbjct: 136 LGLTFNYNFDLWGGKRAAWEASVNNQKAAEIDQQAARIALSTGITQTYIQLANAYALEDL 195 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + D + +E++ F G TS+ L ++ S + + + ++ L Sbjct: 196 AQKDFDRNQHIVEITDRLFKNGLTSEDRLYAAQSGAASAKQALKQRSLVVAQLKNALAAL 255 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 +G L + + + Q + ++P + +PA LI +RPDI ++ + +I AK Sbjct: 256 VGTGPDRALS-IARPDVSVQADFHLPAD--LPASLISHRPDITAARWRVEATSKQIDAAK 312 Query: 297 SDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + YP +L G ++ D F + W+ P + LPIF +K+N+ + Sbjct: 313 TRFYPDFNLTAMAGFKSVLGDAVFADVSRSWNVTPAISLPIF-TSDLKANLLSKTADYDA 371 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + +T++ A+ EV + + ++ ++ + + ++EL +KS ++ Y+ G S L+ Sbjct: 372 AVAQYNQTLITALNEVSDNVLALKSFEQQLIDAKESMELAEKSYQITEKRYQAGMGSQLE 431 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L E+ + E + K Q +S + L ++G G+ Sbjct: 432 VLMAEQQLLQAESAFTALKNQQQESQIQLIKSLGGGF 468 >gi|257092916|ref|YP_003166557.1| NodT family RND efflux system, outer membrane lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045440|gb|ACV34628.1| RND efflux system, outer membrane lipoprotein, NodT family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 470 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 96/417 (23%), Positives = 189/417 (45%), Gaps = 30/417 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W +S ND L+ +V A+ N + E + A+E +L V A L P + R + + Sbjct: 56 WLKSLNDPQLSAIVAEAIANNPDLRVVAESVRVAQETVLVVGAQLLPQVGVGLGERVLHD 115 Query: 112 LKTNSTGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + +G DS W++D++G+ R S+ A ++ + A+ ++ + + + Sbjct: 116 --QDHSGHTDSARALASVSWELDVWGRLRAQRASAEAAYEATALDYEWARQSLAATVAKT 173 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + A ++ +++A Q + +Y + + L + G + L++V ++A + S + + Sbjct: 174 WYLATETRQLLALAEQAVTVYSELLRLVKARRAAGKDTDLNVVDMQANVDSALASVEAAR 233 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 +S+ ++ LLG YPATE + + ++ P+ PI GIPA L++ RPD+ E Sbjct: 234 QSYGDVRRSLEVLLGRYPATEI-----EAAISYAPD-PPPITTGIPASLLQRRPDLIATE 287 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY-------LPIF 335 + + + K A+ L P SIAL T P L +PI+ Sbjct: 288 RLVLAAFRKTEAAELALLPDF----SIALAGGRLADPLLTLLRLNPWLVTAAIGAAIPIY 343 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++ +R A + + + VL A +EVE AL + + + ++ Sbjct: 344 EGGALEAQVRIATAQQAQAVARYGSVVLTAFREVETALANEPLLARRAVLDESSLSNRTG 403 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK-SYVDLYIAIGSGYN 451 ++ ++ Y G LL + +++ + E DL I R L + + L +A+G Y+ Sbjct: 404 AVRIATQQYLAGAKDLLWVANLQTNQIRSEGDL-IKLRALRHINRIALLLALGGTYD 459 >gi|170720052|ref|YP_001747740.1| RND efflux system outer membrane lipoprotein [Pseudomonas putida W619] gi|169758055|gb|ACA71371.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas putida W619] Length = 509 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/460 (20%), Positives = 201/460 (43%), Gaps = 29/460 (6%) Query: 15 LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + P+ L T +I + + + +WW ++ D LN+ + +A+ Sbjct: 21 LSGCIGTWGIAPQSKTLQANTLTTDAAIREAASDAHWPDQQWWHAYRDPQLNRWLDLAMA 80 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 + T+ A R+ AAK ++ L + AS+ P + G L Sbjct: 81 GSPTLAMAAARVRAAKAMAGVVESAEKLQANGQASLKRHNWPEDQFYGPGALSGANTWDN 140 Query: 123 ------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKERI 174 + +DL+G+ R+ E ++ + A+ A+L + + ++ +YI + HF +R Sbjct: 141 NAAIGFSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELQNNVVRAYIQLSLHFAQR- 199 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I L+ ++ + L+ + G + + + EA + + +L++ + + ++ Sbjct: 200 DIVKAELEQQEQILALAKRRLDGGIGTHFEVSQAEAPLPETHRQLDSLDEEIALTRNQLA 259 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G E +Q+ S L +P +PA+L+ RPD+ ++A I + Sbjct: 260 ALAGKGPGEGAQ-IQRPSLALAAPLQLPS--ALPAELVGQRPDVVASRWQVAAQARGIDV 316 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A + +P++ L GS+ P G +++ GP + LPIFD G+++S + A + Sbjct: 317 AHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPIFDGGRLRSQLGVASA 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +TV+ A+K + + L K+ +V +K+ ++M+ +++G Sbjct: 377 GYDVAVAHYNQTVIGALKNISDQLIRRESMKEQAHFAAESVAAAQKTYDIAMVAFQRGLT 436 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L+ + + + + ++ +L A+G G Sbjct: 437 DYLNVLNAQTLLLRQQQVQQQVQAARLIAHAELVTALGGG 476 >gi|302188919|ref|ZP_07265592.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 462 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/462 (21%), Positives = 206/462 (44%), Gaps = 36/462 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL+ C T P P P ++ + D ++WW+ F LN+L++ A + Sbjct: 11 CLLLSACQTPAPPPDSGIQP--PASWAFAENAAAQRSD-VRWWQQFGSPQLNRLIEQASR 67 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLK-----------TNS 116 + + A R+ A+ + A L P ++F+ N N Sbjct: 68 DSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNF 127 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T L + +++D +G +S+L L ++ +L +++ + Y +E+ Sbjct: 128 TSDLTASYEVDFWGGIAAGRDSALQGLRASQFDQATVELTLLANVADRYAQTLAAREQGR 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA L + + L ++ G+ + L L + + + + + ++P +++ + ++ Sbjct: 188 IAELNLTNAQDVLRLVQTRYDSGSATALELAQQKNLVATQQRELPRVQQLANEQLITLAA 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P + LH + + + I G+P++L+ RPD+ E LA + A + +A Sbjct: 248 LLGQP-VQNLHLADQAFDTLN---WPDIGPGLPSELLTRRPDLAKAEADLAAAQANVTVA 303 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++ + P L+L+ + + + + S L PIF+ G++ + +A + +E Sbjct: 304 RAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATARQEEL 363 Query: 355 YITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSL 411 T++ ++N+ +VE AL SI D++ + H EL + + ++ Y++G L Sbjct: 364 LETYRGAIINSFADVEKALNSIRGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAEDL 420 Query: 412 LDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +L+ +R + V L +A+ Q + + LY A+G G+ Sbjct: 421 LTVLETQRTLYQAQDISVQLRLARLQ---ASIALYKALGGGW 459 >gi|254522726|ref|ZP_05134781.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] gi|219720317|gb|EED38842.1| outer membrane efflux protein [Stenotrophomonas sp. SKA14] Length = 479 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 105/422 (24%), Positives = 185/422 (43%), Gaps = 33/422 (7%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 I DT WW F D L++LV AL N + A + ++ L+P +S Sbjct: 70 IRQDT--WWTGFGDERLDRLVAQALAANSDLAAAGLAVQRSRLQAGLASNALWPQPSSSG 127 Query: 105 SHRFIPNL--------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKL 154 ++ STG + W++DL+G R + +A ++ ++ D L Sbjct: 128 VSGSASRATDQADDWRRSYSTG-VSLGWEVDLWG-RLRTQRDIARWEAQASEEDRQNTAL 185 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 VIS I Y + + + I+ L+ ++ EL +F GA S+L + + ++S Sbjct: 186 LVISDTINQYWNLAYLNQSIATGQANLERLERTRELVQARFDAGAVSRLEVRQALQNLQS 245 Query: 215 IESDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 S LE+ R+ V N T+L G P + Q + + I G+P DL+ Sbjct: 246 QRSSQSALEQQ-RVEVRNALTVLLDGTPWPQ-----QDEPQDLLGARSPAIAEGLPTDLL 299 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKL 330 RPD+R E +L +S+ I + + YP+LSL GS+ + S N + G L Sbjct: 300 GRRPDLRAAELRLRNSLKTIKVTATQYYPALSLTGSLG-SSATSLGDVLRNPVATLGAGL 358 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ--- 387 LP + + + + A ++ Q +++T+ A+ EV+NAL++ + + V Q Sbjct: 359 SLPFLNLHRAQLDTDIAGTAYQIAATNFRKTLYTALSEVDNALSAREQLARQVAASQASY 418 Query: 388 -HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AVE+ + + YR G L L+ ++ E+ L+ ++ + V L+ A+ Sbjct: 419 DEAVEVERA----QEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQGQLNNDVTLFKAL 474 Query: 447 GS 448 G Sbjct: 475 GG 476 >gi|167849550|ref|ZP_02475058.1| outer membrane efflux protein OprB [Burkholderia pseudomallei B7210] Length = 350 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 20/309 (6%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++++++ + Y+ + + + L + + +L+ L+F G S+L L + + Sbjct: 15 AEISLVASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTV 74 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +++ + ++ ++ + L+G P + L N Q NL I G+P+DL Sbjct: 75 VETALASQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDL 131 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDI E+ L + A IG A++ +P +SL G+ + T F WSF P Sbjct: 132 LTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAP 191 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF+ G+ +N+ A + + +++ + +A +EV + L + + + L+ Sbjct: 192 NIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALER 251 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVD 441 ++ LS + YR G S L +L + DL A+ QL + VD Sbjct: 252 NEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQHQLISARLARWTNLVD 304 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 305 LYRALGGGW 313 >gi|170737688|ref|YP_001778948.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169819876|gb|ACA94458.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 459 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/360 (23%), Positives = 167/360 (46%), Gaps = 22/360 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASI 104 T WW SF D L+ L+ AL+ N + A R+ A+ V +L P + ++ Sbjct: 54 TGDWWRSFGDPQLDALIDDALRANNDLAIAAIRVYRAQLQAGLVDTNLTPNVTLGANGAV 113 Query: 105 SHRFIPNLKTNSTGQLDS-DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 SH + + S+G S +++DL+G+ + +++ D+ ++ A+L++I Sbjct: 114 SHTLDTHQMSRSSGVNGSLSYELDLWGRLAALRDAAHWEADATADDLEAARLSLIGTTAA 173 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + +I++ + ++ + L + T GA S L L + E + + + L Sbjct: 174 LYWQIGYLNRQIALGDANIAYAERTLALVRSRHTAGAVSGLDLAQAEQSLAAQRAAQTQL 233 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + N H ++ L P + + P+ + G+PA L+ RPD+R E Sbjct: 234 IQQRTENRHALAILFDRPPQQRAAEPAALPDAAPPD----VAAGLPASLLGRRPDLRAAE 289 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKI 340 +L +S+A++ ++ YP+ +L GS A T S T+ + G L LP + Sbjct: 290 FRLRESLAQVDATRTSFYPTFTLTGS-AGTTSTSLERVLTNPVGTLGLGLALPFIQWNTM 348 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + IR ++S +E + +++ + A+ EVENAL++ ++Q E ++++SL+ Sbjct: 349 QLQIRVSKSQYEEAVVGFRQRLYTALAEVENALSA---------RVQLEREAEQRALSLA 399 >gi|294670930|ref|ZP_06735786.1| hypothetical protein NEIELOOT_02634 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307417|gb|EFE48660.1| hypothetical protein NEIELOOT_02634 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 533 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 110/491 (22%), Positives = 202/491 (41%), Gaps = 72/491 (14%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +F L L +GC P++T + T +S+ I +WW + ND L+ L+ Sbjct: 64 LFFLCAALFSGCATHPKHTPAAVETAETLGLPASSQPPI---APQWWRALNDAKLDGLID 120 Query: 67 IALQQ------------------NLTILQATERINAAKENIL----SVRADLFPSSYASI 104 AL + +L Q +I L V P + + Sbjct: 121 TALARSPDLAAAQARLRQAQAGADLADSQRGVKIGLGLSGALLHRDGVNEREKPELISDL 180 Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKL 160 R + + TN T QL W D+FG+ +H +E++L + ++ +L ++++ Sbjct: 181 EKRLLGDHGTNITYESLQLQGQWSPDVFGKYKHQLEAALGQQRAVEYEIAQTRL-LLAQG 239 Query: 161 IPSYIDARHF----KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV-----KLEAE 211 + +Y ++R++ Q L+ ++ + + Q A S+L V + +A Sbjct: 240 VATYYRQWQLLLETRQRVAQRAQ-LNREREQVVRELIHAGQVAPSRLYAVQQGNSRFQAA 298 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN----LYIPINIGI 267 + ++ +I + H ++ L G PA +NF PN P + Sbjct: 299 LSDLDGNIAQIR-------HALAALTGQPAQAL--------DNFAPNPAANTPAPPVSQL 343 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPG 319 ADL+ RPD+ Q + L + AK++ YP++++ L+ H +SF Sbjct: 344 TADLLGKRPDLAAQREALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFLA 403 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 P + LPIF G +++N+ R E+ EQ + + V A++E +ALT Sbjct: 404 -----GLLPSVSLPIFTSGALRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYEIA 458 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 V L +K+ + + YR G + LD L + T + E L+ A+ +L ++ Sbjct: 459 AAAVRDQTEMTALARKNAAAAQSRYRAGLDNKLDWLAAQDETLQNEAQLAQAQAKLFTAW 518 Query: 440 VDLYIAIGSGY 450 + L A G G+ Sbjct: 519 LALNTAFGGGF 529 >gi|146275724|ref|YP_001165884.1| RND efflux system outer membrane lipoprotein [Novosphingobium aromaticivorans DSM 12444] gi|145322415|gb|ABP64358.1| RND efflux system, outer membrane lipoprotein, NodT family [Novosphingobium aromaticivorans DSM 12444] Length = 466 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 103/475 (21%), Positives = 199/475 (41%), Gaps = 40/475 (8%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTLKWWE 54 R + SL +V L CTVGP+Y P LP ++ + +L +WW Sbjct: 3 RGLLSLGMVASLGACTVGPDYHLPETAAIRTPSASAPLPADGNVATAADLPP----RWWH 58 Query: 55 SFNDTSLNKLVKIALQQNLTI------LQATERINAAKENI---------LSVRADLFPS 99 ++D L++L + AL + + LQ + AA E + RA L Sbjct: 59 LYDDPVLDRLEQEALDGSTDLREAAANLQRARAVTAAAEGASEPDFEVEGAAERARLSGE 118 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 ++ + +P G L ++ DLFG+ RR +E++ A ++ A ++ K+ + Sbjct: 119 TF--LLDEALPVATLGDAG-LSMRYQFDLFGRVRRSVEAAKAGEEARQALLEAVKVTLAG 175 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ E + +A + + + + + G + +E+ + + + Sbjct: 176 EVARAYVGVCSAHEGLELAERAVSVQEAQADAVRRMHAAGRLGATEVTAIESRLAAARAR 235 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P R +++ ++ LLG ++ + + P L P+ G A L+ RPDI Sbjct: 236 LPEERTRIRASLYRLAFLLGRAPADYPR--EAEGCTHLPRLARPLPAGDGASLLARRPDI 293 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E++LA + A+IG+A +DLYP + GS D N WS G ++ F Sbjct: 294 RAAERELAAATARIGVATADLYPQIGFGLSAGSSGFLSDLGEAPAN-RWSIGSLIHWS-F 351 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ +R A + A + VL++++E AL + +L A ++ Sbjct: 352 PGAGARARVRAANADADAALARFDGVVLSSLREAHTALDAYAGAHDRSVELDLAAGAAQR 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + GR + L LD + + + + +S + L++A+G G+ Sbjct: 412 GAEQVARLRQAGRAAALPDLDSQTTALAAQARAHAGREAVVESQITLFMALGGGW 466 >gi|300311360|ref|YP_003775452.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300074145|gb|ADJ63544.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 470 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 180/411 (43%), Gaps = 16/411 (3%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D +WW+ F D +L L+ AL++N + A ++ A+ P+ AS+ Sbjct: 55 DVQRWWQGFGDATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGAS 114 Query: 108 FIPNLKTN------STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISK 159 L + S + +++DL+G R S L+ ++ + D L +I Sbjct: 115 SSKQLDGDRISTRASQSSVKLSYEVDLWG-RLAAASDLSRWEALATEQDRQSTALTLIGT 173 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 Y + +R++ A Q + +K +EL ++ GA S + ++ + + S +S Sbjct: 174 TANLYWTGAYLNQRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSY 233 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDI 278 L + N + ++ L P + + + P +P+ G+PA+L+ RPD+ Sbjct: 234 TELVQQRVENDNALAILFDQPPGKAIALPARL-----PEQALPVLAAGVPAELLGRRPDL 288 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTHWSFGPKLYLPIFDK 337 R E ++ ++A + A+ + YP LSL G++ + D N + G L LP Sbjct: 289 RALELRIRSALAGVDQARLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQH 348 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 ++K + +++ + +++ + A EVENAL++ + + L ++ + + Sbjct: 349 SEMKFKVGISQADFDTAVLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAE 408 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L + YR G +L LD + E+ L+ + K+ + LY A+G Sbjct: 409 RLLEVRYRAGSATLQLWLDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGG 459 >gi|260910158|ref|ZP_05916835.1| FusA/NodT family multidrug resistance protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635662|gb|EEX53675.1| FusA/NodT family multidrug resistance protein [Prevotella sp. oral taxon 472 str. F0295] Length = 461 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 107/426 (25%), Positives = 181/426 (42%), Gaps = 49/426 (11%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L W F D L + AL+ N +L A + A+ + S R PS +A I Sbjct: 58 LPWRSVFTDPQLQSHIATALEHNYDLLNAALNVQMAEAQLKSARLAFLPS-FAFTPQGTI 116 Query: 110 PNLKTNSTGQ-----LDSDWKIDLFGQ----RRHIESSLANL-DSAYAQVDIAKLNVISK 159 + N+ + + + W IDLFG +R + +L + D A + +++ Sbjct: 117 SSWDGNAAVKTYSLPVSASWTIDLFGTLLSAKRSSQMALLGMKDYQLA----TRTRLVAN 172 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + + + ++ L K E L+ G + E+ S+++ Sbjct: 173 VANLYYTLLMLDKELELIDEMEVLAKDTWETMKLQKEYGNVRSTGVQSAESNYYSVQAQK 232 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINI--GIPADLIRNRP 276 L++ R + + +S LLG A + QS +P N GI ++ NRP Sbjct: 233 VGLKRQLRESENALSLLLGQAAGTIARGKFEGQS--------LPTNFSTGIALQMLNNRP 284 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLP 333 D+ E LA + A+S YP+L+L+ T+ N S L P Sbjct: 285 DVHAAEMSLAQCFYNVQTARSRFYPTLTLSAQGGYTNSGGMGITNPAKLLLSAVGSLVQP 344 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--------EDKKIVTK 385 IF +G+I + ++ A+ + Y TWQ+ VL+A EV NAL N E K+IVT Sbjct: 345 IFQRGQIVAGLKVAKIQYERAYNTWQQAVLSAGNEVSNALVLYNASAEKSEIEAKQIVT- 403 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLY 443 L+ VE K ++ + R S L+++ ++ ++V LS + K + V+LY Sbjct: 404 LRQNVEDTKLLLT-------ESRGSYLEVITAQQTL--LQVQLSKVQDDFYKMQAVVNLY 454 Query: 444 IAIGSG 449 +A+G G Sbjct: 455 MALGGG 460 >gi|296387586|ref|ZP_06877061.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] Length = 496 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/444 (20%), Positives = 197/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + P+ L T +I + +WW+ + D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPQAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 245 IQLTRNLLAALAGKGPGEG-RTIRRPSLNLAAQPSLPS--ALPAELLGRRPDVVARRWQV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 302 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 361 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + +V + Sbjct: 362 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---SVASAQ 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 416 KTYDIATLAYQRGLTDYLNVLNAQ 439 >gi|76809752|ref|YP_333320.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|76579205|gb|ABA48680.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] Length = 514 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 74 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 133 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 134 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 193 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 194 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 253 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 254 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 310 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 311 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 366 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 367 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 426 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 427 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 483 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 484 ALGGGFD 490 >gi|146341629|ref|YP_001206677.1| putative outer membrane lipoprotein [Bradyrhizobium sp. ORS278] gi|146194435|emb|CAL78460.1| putative outer membrane lipoprotein (NodT-like), RND efflux system [Bradyrhizobium sp. ORS278] Length = 523 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 99/475 (20%), Positives = 197/475 (41%), Gaps = 51/475 (10%) Query: 17 GCTVGPEYTKPHMPLL--------------------PTQ-FSIGNSKNLINIDTLKWWES 55 GC VGP++ P P + P Q F G +WW + Sbjct: 29 GCAVGPDFITPAPPAVGGYTREPLASPAVDRSGPRVPAQHFEAGADV------PARWWAA 82 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA--SISHRFIPNLK 113 F LN L++ ++ N T+ A I A N L+ R +P A + + + N+ Sbjct: 83 FRSAPLNTLIRRSVAHNPTLDAADAAIRIAAANALAQRGLFYPQLGANYTAADQQTSNMG 142 Query: 114 TNS-------------TGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISK 159 T T QL + DL+GQ R +E+ A + A Q++ A L + + Sbjct: 143 TQQGPADPAQSRYTLHTAQLTISFVPDLWGQNLRSVENLEAQAEQAQFQLEAAYLTLTAN 202 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ + I + +I+ +I+ + + + + + G +++ ++ + + +E + Sbjct: 203 VVTAAIQEASLRGQIAATERIIKIERDILGILQKQLQAGQAAQVDVLTQQTALAQVEQTL 262 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P L+K + ++ L G + A E Q NL PI++ PA L+ RPD+ Sbjct: 263 PPLQKQLAIQRDLLTALAGQFSADEITERFDLQHLALTRNL--PISL--PATLVAQRPDV 318 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 R E L + A +G+A + P+++L+ GS A F ++ +F Sbjct: 319 RATEANLHAASALVGVAIAARLPNITLSANPGSSAFKAAELFTPGTLFYTVAGSATATVF 378 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D + + AE+ + +++ V+ A++ V ++L S+ D + V A + + Sbjct: 379 DGLTLYHRQKAAEAGLDQAGALYRQAVITALQNVADSLRSLQADARAVQAAIKAEDSARA 438 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + G+ S + +L+ ++A + A+ L++A+G G+ Sbjct: 439 TLDIVQKQLSLGQVSQVTVLNAQQAYLNTAIARVQAEAARLTDTAALFMALGGGW 493 >gi|329296893|ref|ZP_08254229.1| RND efflux system outer membrane lipoprotein [Plautia stali symbiont] Length = 462 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 166/348 (47%), Gaps = 31/348 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLK--WWESFNDTSLNKLVKIA 68 +L+AGC+VGP+Y + M LPT + + G ++ + K WW ++D +L+ L++ Sbjct: 13 LLVAGCSVGPDYQRSAM-ALPTHYKEAKGWTQATPQDASRKGEWWTVYHDVTLSSLLRQV 71 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDL 128 N + + A+ RA LFPS S ++ + + L + W++DL Sbjct: 72 SISNQNVASYAAQYREAQALSAQSRAALFPSLDYDASTSGQCSVSNSHSATLSASWELDL 131 Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 +G+ R E A+ ++ A++ L+ S+L Y R E+I++ + ++ Y++ Sbjct: 132 WGKLHRSQEEDKASAQASQAELANVTLSAQSELAQDYFQLRIIDEKIALYQRSIEAYQRY 191 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + + + K+ G+ S+ +L + + LE H ++ LLG +F Sbjct: 192 LSVINNKYRAGSESRATLAQ------DYQWQRAQLE-------HAVALLLGRAPADFTLP 238 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 + K P+ IP ++ P+ L++ RPDI Y E+ +A + A +G+A + YP L+L+ Sbjct: 239 VAKLDATL-PS--IPESL--PSALLQRRPDIAYAERNVAAANAAVGVAIAGYYPDLTLSA 293 Query: 308 SIALTHDN-----SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 S +T S P N WS GP+L + D G + + +A + Sbjct: 294 SGGVTASAIHSLLSLP--NRAWSLGPELSGTLLDFGATSAKVAQARAG 339 >gi|117921891|ref|YP_871083.1| outer membrane efflux protein [Shewanella sp. ANA-3] gi|117614223|gb|ABK49677.1| outer membrane efflux protein [Shewanella sp. ANA-3] Length = 477 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 100/459 (21%), Positives = 207/459 (45%), Gaps = 32/459 (6%) Query: 6 AIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ ++ I LL+GC + ++ P + + P Q+ +++D WW+ FN LN+ Sbjct: 23 SVIAISIALLSGCGALMRSDFEPPALQV-PEQWQHTQVNGQVSLD--PWWQKFNQPELNQ 79 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 L+ L N + AT + A+ R DL+P ++ + L S+ + Sbjct: 80 LISQVLSSNNDLTLATLTLQKARLQAGLARDDLYPQLSSNNTASVNKPLDGGSSSRAFQA 139 Query: 120 -LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--------NVISKLIPSYIDARHF 170 L +++DL+G+ AN+D A +A L ++++ Y + Sbjct: 140 NLSVSYEVDLWGKVS------ANIDQAQ-WTALASLEDRESTAQSLVATTASLYWQIGYL 192 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ERI ++++ ++ ++ + L+ ++ GA ++L++++ + + E+ L + + Sbjct: 193 HERIELSNKSIEHSRQTLALTQRQYASGAVTELNVLESQRSLAGQEASHSQLLQQL-VEA 251 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSV 289 N +L A E + KQ P+ +P + +GIPADL+ RPD++ +L ++ Sbjct: 252 ENALAILLNRAPEQVAVEIKQL----PDSAVPEVGVGIPADLVGRRPDVKAALYQLRSAL 307 Query: 290 AKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 A + +PSLSL GS+ T + N S G L LP +++ N A+ Sbjct: 308 ASKDATYASYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIAD 367 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 Q +++++T+ +A ++V+NA+++ + KL+ ++ ++ YR G Sbjct: 368 IDYQSAIVSYRKTLYSAFEDVDNAISAKQQYAYQGEKLELQFSAAAQAEAIYESQYRHGA 427 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + +D + E L + + LY A+G Sbjct: 428 IGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALG 466 >gi|187923629|ref|YP_001895271.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187714823|gb|ACD16047.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 502 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 94/425 (22%), Positives = 191/425 (44%), Gaps = 30/425 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 +L W F D L KL+ AL+ + +I QA R+ A I S R+ L+P SY+ Sbjct: 62 SLDWANQFGDPQLPKLIAEALEGSPSIAQAQARLAKASSYIESSRSALYPKVNGSYSWTR 121 Query: 106 HRFIPNL----------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F N + + + W +DL+G+ R + +++ +A A + A++ Sbjct: 122 ELFSGNALYPPPYGGTWYSENNVLASASWDLDLWGKNRERLGQAVSQEKAAEADMQQARV 181 Query: 155 NVISKLIPSYID-ARHFKERISIAHQILDLYKKNI-ELSHLKFTQGATSKLSLVKLEAEI 212 + + + +Y A+ + R A +I + +++I +++ + T G + + I Sbjct: 182 TLAASVASTYNQLAQLYAFRDIAAREIAN--RQDIGRITNGRVTAGLDTNVERQTANGNI 239 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + +S++ L+ + + + LLG L Q N + +P N+ PADL+ Sbjct: 240 ATSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAQPALTNGNV-VALPNNL--PADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 R DI ++ ++ + AK++ +P ++L G A + FGP Sbjct: 297 ARRADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLKAGSRQMQFGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 ++LPIFD G ++S ++ + + +T+++A+ +V ++SI + Q A Sbjct: 357 IHLPIFDAGALRSQLKGRYADFDLDVANYNQTLISALSDVATQVSSIRSIDQQQGDAQRA 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAI 446 ++ K+ L++I Y+ G L +L ++ A + L + +R + + L A+ Sbjct: 417 LDASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAADQTVTGLKMRRRDM---QIGLIKAL 473 Query: 447 GSGYN 451 G G++ Sbjct: 474 GGGFD 478 >gi|221069623|ref|ZP_03545728.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220714646|gb|EED70014.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 458 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 106/406 (26%), Positives = 205/406 (50%), Gaps = 14/406 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW ++ND +LN LV AL QNL + Q+ R+ ++ +L+ AD + R + Sbjct: 47 RWWRAWNDPALNALVDEALSQNLDVAQSVLRLR--QQRLLAGTADAAFRPAVNTGARTLQ 104 Query: 111 NLKTNST---GQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYI 165 ++ T +D W + LFG + A LD A AQ+ A++ +++ ++ Y+ Sbjct: 105 DIAAVDTYFHASIDVSWDLGLFGDSAAARRAGAAGVLD-AQAQLHAARVALVADVVHRYL 163 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D R + + +A + L ++ ++L ++ Q SL + + ++++ ES + TL ++ Sbjct: 164 DIRLAQVQRGLAEKQLQQAQRQLQLLQIRHAQRLADAQSLEQQQLQLRTAESQLSTLNEA 223 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ LLG E ++Q + P + + + +PADL+RNRPDI+ E + Sbjct: 224 QARAAHALAALLGRERAEP-QWLQPSGDAGLPAVQA-LAV-LPADLLRNRPDIQSAEAAV 280 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF---GPKLYLPIFDKGKIKS 342 + A++G++++ LYP L+L GS+ ++ + T S GP++ +P+FD G+ ++ Sbjct: 281 EQAAAEVGVSRAALYPRLTLTGSLLYAYNLTRNHRTTSDSIPMIGPQIDIPLFDWGRRRA 340 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 E + Q +++ VLN I E E AL ++ ++ +LQ ++H + Sbjct: 341 VADGKELALQASIKAYRQAVLNGIAEAEAALAAVAAQQQRQQQLQSERQIHAGREKAQAV 400 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + G S +D RA+ + + + A+ A +YV LY A+G+ Sbjct: 401 RQQLGLSSEFAGIDNARASLHNQSEQATARAAEALAYVALYKAVGA 446 >gi|53719527|ref|YP_108513.1| hypothetical protein BPSL1913 [Burkholderia pseudomallei K96243] gi|126440140|ref|YP_001058784.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|134282408|ref|ZP_01769113.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|167824410|ref|ZP_02455881.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 9] gi|217423536|ref|ZP_03455037.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|226199695|ref|ZP_03795248.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|237812047|ref|YP_002896498.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|254198036|ref|ZP_04904458.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|254297812|ref|ZP_04965265.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|52209941|emb|CAH35913.1| putative exported protein [Burkholderia pseudomallei K96243] gi|126219633|gb|ABN83139.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 668] gi|134246446|gb|EBA46535.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|157806821|gb|EDO83991.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 406e] gi|169654777|gb|EDS87470.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|217393394|gb|EEC33415.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|225928281|gb|EEH24315.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|237506427|gb|ACQ98745.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] Length = 498 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 117 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|294670336|ref|ZP_06735219.1| hypothetical protein NEIELOOT_02055 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307940|gb|EFE49183.1| hypothetical protein NEIELOOT_02055 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 460 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/381 (23%), Positives = 173/381 (45%), Gaps = 28/381 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L+ AL+ N+ + QA +N A + NIL ADL PS S+S Sbjct: 55 WWEIYQSRQLNALMAQALENNIDLKQAAISVNKALYQANILG--ADLVPSFSGSLSASTS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQRRHIESSLANL-DSAYAQVDIA--KLNVISKLI 161 NLKT S G QL +++DL+ R+ ++ A + + Q D+A +L +I+ + Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLW--RKLSATADAQVWEYQATQQDMANTRLTLINNVA 170 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + E I +A + L Y++ ++ KF G + + + S ++++ + Sbjct: 171 DAYFNIAYLNEAIELAQKSLKQYQEINRITDAKFRYGRADSSQPTQAKQSLLSAQNNLLS 230 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IP----INIGIPADLIRNRP 276 L+ S + LL E + P Y +P +N+ +P ++ NRP Sbjct: 231 LKNSLDTQKQVLRNLLNLKPNEAIA--------ADPAQYRLPSVKGVNLDVPITILANRP 282 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLYLPIF 335 D+R E +L S+ + K YPS++L S++ + + + +N G + LP Sbjct: 283 DLRAAEYRLQSSLQSVKAQKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSATINLPFL 342 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K + A+++ + +++ + A+ EV + + + + L KK Sbjct: 343 NWQTMKWKDKTAQANFDSAKLDFEKALTTALNEVNTNYLAYQNAQAALNNQEQRYALDKK 402 Query: 396 SMSLSMINYRQGRYSLLDILD 416 + + Y+ G+ L D L+ Sbjct: 403 NSRYYQVRYQHGKNELKDWLE 423 >gi|53724830|ref|YP_102755.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|124383712|ref|YP_001026175.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|126449127|ref|YP_001080555.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10247] gi|254177585|ref|ZP_04884240.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254358399|ref|ZP_04974672.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|52428253|gb|AAU48846.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|124291732|gb|ABN01001.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei NCTC 10229] gi|126241997|gb|ABO05090.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei NCTC 10247] gi|148027526|gb|EDK85547.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei 2002721280] gi|160698624|gb|EDP88594.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] Length = 498 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 58 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 117 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 118 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 177 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 178 TLATSVARTYNQLAQLYALRDIAGREISNRQTVDKITDGRVGAGLDTNVERQTARGNIAT 237 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 238 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 294 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 295 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 351 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 411 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 467 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 468 ALGGGFD 474 >gi|326402309|ref|YP_004282390.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] gi|325049170|dbj|BAJ79508.1| outer membrane efflux protein [Acidiphilium multivorum AIU301] Length = 502 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 23/453 (5%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LAGC VGP + P + P +FS + WW F L++LV+ A N + Sbjct: 50 LAGCAVGPAFNMPQTNV-PARFSA-TADAKPAWPKPGWWRHFGSPELDRLVEAAKAHNFS 107 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRF----------IPNLKTNS-TGQLDSD 123 +++A +++ AA A L P+ S S F + + T S T + Sbjct: 108 VIEAIDQLEAANAQAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSFTATFQAS 167 Query: 124 WKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++D +G+ + ++ AN +A L + + Y +++++ IA + L Sbjct: 168 YQLDFWGKNYDALRAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLK 227 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + + G ++ + A + S ++IP L R + L G A Sbjct: 228 AAEGLLAQLRAELRAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGR-AP 286 Query: 243 EFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 EFL L +P + G+PA L+ RPDI + L + A + A + +P Sbjct: 287 EFLRVRGGSLGA----LTVPALAPGLPAGLLERRPDIAEAKANLIAANANVRGAIAAFFP 342 Query: 302 SLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S++L GS F +T S + PIF+ G + +R + ++ +E + Sbjct: 343 SITLTGSGGWQSKALNLLFAPGSTLISAATSIAQPIFEGGTLTGQLRVSRATYREDVAKY 402 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ V+ A +VE A+T++ Q AV + ++ + R G + +L+ E Sbjct: 403 EQAVVQAFTDVETAMTALRYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAE 462 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E L + + V+LY A+G G+ Sbjct: 463 QTLLSDETTLVTTRLTRLDAAVNLYKAMGGGWT 495 >gi|121600501|ref|YP_992832.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|238563862|ref|ZP_00438157.2| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|251767327|ref|ZP_02266812.2| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] gi|121229311|gb|ABM51829.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|238519817|gb|EEP83283.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|243063189|gb|EES45375.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] Length = 514 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 74 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 133 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 134 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 193 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 194 TLATSVARTYNQLAQLYALRDIAGREISNRQTVDKITDGRVGAGLDTNVERQTARGNIAT 253 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 254 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 310 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 311 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 366 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 367 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 426 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 427 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 483 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 484 ALGGGFD 490 >gi|87199242|ref|YP_496499.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium aromaticivorans DSM 12444] gi|87134923|gb|ABD25665.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium aromaticivorans DSM 12444] Length = 467 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 106/458 (23%), Positives = 190/458 (41%), Gaps = 40/458 (8%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESFNDTSLNKLVKIALQQN 72 GC + P+Y +P P+ P G L + D L W + F D L +++ AL N Sbjct: 17 GCNLAPKYVQPAAPVPPALPQGGAYPGLAPGETDADALGWRDFFADARLQQVIAKALADN 76 Query: 73 LTILQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDW 124 + + A+ RA LFP S+ + R N + S + Sbjct: 77 RNLRATLANVERARALYRVDRAALFPIVNATGTLSAVQGTAGRVTDNFLVQAG---TSAY 133 Query: 125 KIDLFGQRRH-----IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +IDL+G+ R+ ES LA D IA ++++ +++ + + IA + Sbjct: 134 EIDLWGRLRNQSQSAFESYLAT-DEGRKATQIA---LVAETASAWLSYAATADALRIAEE 189 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + ++ ++++ + G +KL + + S E+ + S + + + G Sbjct: 190 TVASRRRTLDVNVRREANGIGTKLDVATATTALNSAEAAVADFRTSLAQARNALELIAGG 249 Query: 240 P-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P E L + + + L +G+ + ++ RPD+ E L + A IG A++ Sbjct: 250 PLPDELLPSTLGEGDQVRAEL----PVGLSSQVLLRRPDVLAAEHDLKATYADIGAARAA 305 Query: 299 LYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P+LSL G F G + + L IFD G N+ A+++ Sbjct: 306 FFPTLSLTGLFGFASSGLTSIFSGGDFQKTANAALRQRIFDGGATAGNLAAAKAARDAAL 365 Query: 356 ITWQETVLNAIKEVENALT---SINEDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYSL 411 T++ T+ A +EV +AL +I+E + T L+ +A ++ LS Y G S Sbjct: 366 ATYERTIQTAFREVADALARRGTIDESVRAQTSLEANAATAYR----LSQSRYDAGVASY 421 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ LD +R L + A + V+LY A+G G Sbjct: 422 LEPLDAQRTLYNARQSLVSVRLTKASNMVELYRALGGG 459 >gi|218682214|ref|ZP_03529815.1| RND efflux system, outer membrane lipoprotein, NodT family [Rhizobium etli CIAT 894] Length = 148 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 11/143 (7%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MPL P +F G +K+ ++ T WW +FND+ LN V L+QNLT+ QA ERINAA Sbjct: 6 MPL-PAKFGEGGTKSDGDVATAAWWTAFNDSRLNGYVNAGLEQNLTVQQAIERINAASAA 64 Query: 89 ILSVRADLFPSSYASISH---------RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESS 138 + + A P+ SH R + + S G + W +DLFG +R ES+ Sbjct: 65 VTTAGAGALPNLTVGGSHTVSGQRGELRTQFDTRNTSGGDVQLSWLLDLFGLYKRSTESA 124 Query: 139 LANLDSAYAQVDIAKLNVISKLI 161 LA+LDSAY+ D+A+L +I L+ Sbjct: 125 LASLDSAYSSADVARLTLIQDLV 147 >gi|187924275|ref|YP_001895917.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187715469|gb|ACD16693.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 511 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 43/437 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP--------LLPTQF--SIGNSKNLI--NIDTLKWW 53 A + LA C+ GP P MP PTQ + G ++ + +WW Sbjct: 13 AALTGMACALAACSFGPSGEPPAMPQPAHYGAQAQPTQTVPAQGVTQQFVVGAKPVPEWW 72 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---SYASISHRF- 108 + + +LN LV L+ + T+ + + AA+E + + + + + P+ + +R Sbjct: 73 KLYRSDALNALVDEGLRNSPTLAATDKSLAAAREQLRAQIGSSMLPTVDLGGQATRNRAL 132 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKL 160 IP N+ GQL + + DLFG R +++LA + A Q D A+ + + + Sbjct: 133 AIPEAGPNTFLYNIFVGQLQAHYTFDLFGAARLADAALAARVNVQAYQFDAARRALAANI 192 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + I + +I +++ + + ++ GA S + + S+ + +P Sbjct: 193 VTAAITSAALHAQIETTERLVTIANDQARDTQRRYALGAVSHADQLSAQQSAASLSASLP 252 Query: 221 TLEKSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 L++ + H ++ LLG A + L Q + P + ++L+R RPD Sbjct: 253 GLKQQWLSTRHALAVLLGRTPDAAPDDLELAQLRVPEQVPVVVP-------SELLRARPD 305 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPI 334 I+ + L + A +G+A + ++PSLSL+ S+ + + G WS G L P+ Sbjct: 306 IQAADAALKAAAADVGVATAQMFPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPL 365 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G + + R A + +++TVL A + V + L ++ D + + A + Sbjct: 366 FHGGALFAQRRAAVDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQAL----DAANIAA 421 Query: 395 KSMSLSMINYRQGRYSL 411 +S + + + GRY L Sbjct: 422 RS-AQGIFDETSGRYRL 437 >gi|167816035|ref|ZP_02447715.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 91] gi|167902922|ref|ZP_02490127.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei NCTC 13177] Length = 474 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|186472849|ref|YP_001860191.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184195181|gb|ACC73145.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 502 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/419 (21%), Positives = 198/419 (47%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 W + F D L L+ AL+ + T+ QA R+ +A + +A P + Y+ ++ Sbjct: 66 WADQFGDAQLKALIDEALKGSPTLEQARARVASASAYSETAKASTMPRVDADYSLTRQQY 125 Query: 109 -----IP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 +P + +T + G L + + +DL+G+ R ++++++ L ++ A ++ KL + Sbjct: 126 SGTALVPPPTGGSWQTENKGLLSASYDLDLWGKNREALKAAISQLQASQADAEVVKLTLT 185 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y AR + R IA Q + ++ ++ + G +++ +A + + Sbjct: 186 TSIARTYNQLARLYALR-DIAQQEIVQREQIDRITAGRIATGLDTEVERKTAQANLATSR 244 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + +L+ + I+ LLG L + + + ++ +P N+ PADL+ RP Sbjct: 245 ATLKSLDGQILATRYQIAALLGAGPDRGLQ-IARPTLGIGDDVNLPDNL--PADLVSRRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLP 333 DI ++ + AK++ YP ++L+ +I L + S GP ++LP Sbjct: 302 DIVAARWRVDAMTHDVKEAKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASVGPAIHLP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++++ ++ + T+ +T++ A+ EV L + + Q A + Sbjct: 362 IFDAGELRAQLKGRYADFDYAVATYNQTLVTALSEVATQLAGVRSTDGQLVDAQTAQDAA 421 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 +++ SL+++ Y+ G + L +L+ + + D ++A ++ + + L A+G G+ Sbjct: 422 RQADSLALVQYKAGLTNQLTVLNAD--VNALAADQAVANLRMDRRDQQIALASALGGGF 478 >gi|330898061|gb|EGH29480.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 249 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 12/240 (5%) Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +P L+ ++ + +LG P H P+ + G PADL+R RPD+ Sbjct: 1 MPILQTGLDAAMNALDVMLGVP--PGTHRGSLAETGRIPHAPALTSTGTPADLLRRRPDL 58 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGYNTHWSFGPKLYLPI 334 E++LA S A+IG+A S+ YP LSL+ + A++ N F G + + L + Sbjct: 59 IVAEQRLAASNARIGMAISEYYPKLSLSALLGSATAVSSGNLFTGGASQSAGILGLRWRL 118 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA---LTSINEDKKIVTKLQHAVE 391 FD G++ + I +A+ E ++++VL A ++VENA LTS ++ K + A+ Sbjct: 119 FDFGRVNARISQAKGQEAEALAAYRQSVLRATEDVENAFSSLTSRETQAAMLGKSETALA 178 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S S +Y +G SL+++L + +V + A + A++ V ++ A+G G+ Sbjct: 179 SARQS---SFASYSKGAASLIEVLRADEKMLQVADAKAQAHVESAQAAVAVFKALGGGWQ 235 >gi|213967125|ref|ZP_03395274.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] gi|301386288|ref|ZP_07234706.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato Max13] gi|302061417|ref|ZP_07252958.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato K40] gi|302132975|ref|ZP_07258965.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927967|gb|EEB61513.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato T1] Length = 498 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 97/483 (20%), Positives = 217/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ + H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTRGITPQGSVLHADSLATDQAIQSASLDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDVQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQVQ----GSASLMRHD 120 Query: 109 IPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTHTWDNNASLGLSYALDLWGRERNASEQAVDLAHMSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 HRQINALQEAIALSRNQLAALAGKGPGQGA-ALQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A +D YP+++L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHADFYPNVNLVGSLSYMATGGGLLEFLNGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + R ++ + + +T++ A+K V + L TS+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRVSAAYDQAVAHYNQTLVMALKSVSDQLIRRTSMDKQQALAVE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLMVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|260173957|ref|ZP_05760369.1| multidrug efflux pump channel protein [Bacteroides sp. D2] gi|315922223|ref|ZP_07918463.1| multidrug efflux pump channel protein [Bacteroides sp. D2] gi|313696098|gb|EFS32933.1| multidrug efflux pump channel protein [Bacteroides sp. D2] Length = 454 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 205/465 (44%), Gaps = 40/465 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+++ DT L W E F D L Sbjct: 6 ILSAATLILSSCGI---YNK-YKPVSEVPEGLYGSESVAATDTANFGNLSWREVFTDPYL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNSTG 118 LV AL +N + A R+ A+ +L+ + PS + + + F T + Sbjct: 62 QNLVDSALLRNTDMQTAHLRVKEAEATLLTSKLSYLPSLFLAPEGAASSFDRGKATQTYS 121 Query: 119 -QLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K +++ + +Y + Sbjct: 122 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVASVANTYYTLLMLDSQ 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA +K+++ + G ++ L + EA +I + + L++ +++ Sbjct: 179 YEIAVATEAAWKESVNATRAMKKAGMVNEAGLAQTEATYFNICTTVLDLKEQINQAENSL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL E H +Q+ N +P N +G+P ++ NRPD+R E LA + Sbjct: 239 ALLLA----ETPHQIQRGKLG---NQQLPENFSVGVPLQMLANRPDVRSAEFSLAQAFYT 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A Sbjct: 292 TNAARAAFYPSITLSGSAGWTNSAGSMIVNPG-KFLASAVASLTQPLFNKGANIAQLKIA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ +E +++++T+LNA EV AL + E K +++ KS SL M Sbjct: 351 KAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKADYYNKQVASLQTAAKSTSLLM--- 407 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L ++ ++ + + + LY A+G G Sbjct: 408 KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 452 >gi|167894519|ref|ZP_02481921.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 471 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQTRIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|167911160|ref|ZP_02498251.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 471 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|300818004|ref|ZP_07098217.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 107-1] gi|300529414|gb|EFK50476.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 107-1] Length = 488 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNTALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|194289939|ref|YP_002005846.1| outer membrane protein [Cupriavidus taiwanensis LMG 19424] gi|193223774|emb|CAQ69781.1| putative outer membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 522 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 88/422 (20%), Positives = 194/422 (45%), Gaps = 29/422 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 W + F D L+ LV A++ N ++ A R+ A++ + R+ L+P + I R Sbjct: 82 WVDQFKDPQLSALVDEAVKDNPSLQAAFARVEASRAMAEATRSALYPHVEFEGSLIRQRL 141 Query: 109 -----------IPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 + + S Q+ + D +G+ R +E++L++ +A A+ ++L + Sbjct: 142 SETDLFEGTPLAGSWQNQSRLQVGLSYDFDFWGKNRDALEAALSDDRAAEAESQASRLIL 201 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y + +A + + + ELS + G +++ + + + + Sbjct: 202 ATSIARNYARLAALYAQRDVAERAIAQRRDLTELSRQRLAAGLDTQVETTQARGTVAASQ 261 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +D+ +++ + + ++ LLG L +++ Q +P N+ I L+ RP Sbjct: 262 TDLQRVDEEIALARNQLAALLGKGPDRGLQ-IERPVLLAQATPTLPDNLTI--GLLGRRP 318 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 D+ ++ + I +A+ + P +SL+ G AL G + + GP L LP Sbjct: 319 DLVAARWRVEAASKDINVARKEFLPDVSLSAFAGLAALDPSRLLMGISRTFGIGPTLRLP 378 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVEL 392 IF+ G++++N++ + + + +++A++E + +TSI DK+I T+ + A++L Sbjct: 379 IFEGGRLRANLKGKYAGYDIAVANYNQALVDALRETADTMTSIRSVDKQIQTQ-REALDL 437 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + +L+ Y+ G + L +L+ E ++ DL + L + L A+G G Sbjct: 438 AEHAYALATTRYKAGLGTQLTVLNAESNVLQQRRLATDLQARRLDL---QMGLMKALGGG 494 Query: 450 YN 451 Y Sbjct: 495 YQ 496 >gi|255606401|ref|XP_002538560.1| Outer membrane protein oprM precursor, putative [Ricinus communis] gi|223511583|gb|EEF23824.1| Outer membrane protein oprM precursor, putative [Ricinus communis] Length = 267 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 101/188 (53%), Gaps = 3/188 (1%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNT 322 G+P++L+ RPD+R E++L + +G+A+S YPS+SL G + F G Sbjct: 73 GLPSELMLRRPDLRQAEQQLIAAHGNVGVARSAYYPSISLTGYFGGESKHLADLFIGPAR 132 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 + F + PIF +I +++ A++ ++ +++ + NA +V NAL + +++ Sbjct: 133 VFQFAAAITEPIFSGKRIGASVDVAKAQEEQALAQYRQAIANAFSDVSNALAAQQAAREV 192 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 VE +K++ L+ + + G S LD+LD ER + +++L+ A+R + DL Sbjct: 193 RVAETAHVEALQKTLKLAQLRFENGISSQLDLLDAERNLLQAQLNLTEAERAQRAAVADL 252 Query: 443 YIAIGSGY 450 + A+G G+ Sbjct: 253 FKALGGGW 260 >gi|167738812|ref|ZP_02411586.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 466 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|330722450|gb|EGH00287.1| hypothetical protein imdm_856 [gamma proteobacterium IMCC2047] Length = 176 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 12/174 (6%) Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-------WSFGPKLYLPI 334 E++LA + A+IG+AK+DLYPS+++ G + G +H WS P L Sbjct: 4 ERRLAAATAQIGVAKADLYPSINVTGFLGF-----LSGQASHLDHSARAWSIAPGLSWQG 58 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G +K+ I A + Q+ +Q+ VL A+ E ++ALT+ ++ + L + K Sbjct: 59 FDMGSVKARINIANAEQQKALADYQQQVLVAVNEAQSALTAYTFSQQQLHHLADQQQASK 118 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 K+M+L+ + Y G + LLD++D ER + + + Q+ K V +Y + G Sbjct: 119 KAMALATLQYESGLFDLLDLIDTERTLLAAQDSYAAGQAQVMKDLVAIYESFGG 172 >gi|167919183|ref|ZP_02506274.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei BCC215] Length = 476 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQTRIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|167719810|ref|ZP_02403046.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei DM98] Length = 464 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|167845941|ref|ZP_02471449.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei B7210] gi|242315458|ref|ZP_04814474.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242138697|gb|EES25099.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 486 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|323136758|ref|ZP_08071839.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] gi|322398075|gb|EFY00596.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] Length = 594 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 99/491 (20%), Positives = 215/491 (43%), Gaps = 55/491 (11%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLK-WWESFNDTSLNKLVK 66 ++ + L+ C + ++ KP + + P + F+ K+ I + + F L + Sbjct: 90 TVAVAGLSSCNL--DWEKPDLAVPPPERFNEAKPKSARPIASGSDFAGKFGSKELTEFTS 147 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRF---------IPNL---- 112 AL NL I A RI+ A N V + L+PS ++ + + R +PN Sbjct: 148 RALSDNLAIAAAVARIDQADANARIVSSALWPSINFGANAQRAQVPGTVIGEVPNFNPTK 207 Query: 113 ------------------------KTN-STGQLDSDWKIDLFGQRRHIESS---LANLDS 144 +TN T L++ ++ID +G+ + ++ LAN + Sbjct: 208 ALLQGAGKDEAAALAESLASFSATRTNLFTLGLNASYEIDFWGKNQSASNAARILAN--A 265 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 + D+ ++ ++ ++ +Y+ ++++ IA + + + + + +GA + L Sbjct: 266 SRFDRDVVEIATLAAVMNAYLQVLAVQDQLKIAVEHVRIADHVLGAITARLEKGAATMLD 325 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 + A + ++ IP LE+ R ++ LLG E + + + + Y ++ Sbjct: 326 YGQQAAVLAGQKATIPPLEQILRQTKVTLAVLLG----ETPETIDVKGGSLKGLRYPRLD 381 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYN 321 G+P++++ RPD+ E LA + A++ +PS++LNG L N Sbjct: 382 PGLPSEVLLRRPDVAEAEAILASREFSVLRARAAFFPSITLNGQYGLQSIVLRNLLRPEA 441 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 W G L P+FD ++ + + +E +++ +L A+ + E+AL + E K Sbjct: 442 VAWEIGSNLAQPLFDGFNLQGRYQLEQGRYKEAAALYRQRILAALADTESALIAAKETAK 501 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 V + A+ + K +++ + +G ++ + ++ + + +L +A+ +S V Sbjct: 502 SVKIGEEALAMSKIALNAAQAQLLEGTIDVITLSTVQTTYFQYDFNLVLARLAHFQSAVS 561 Query: 442 LYIAIGSGYNP 452 LY A+G G++P Sbjct: 562 LYQALGGGWSP 572 >gi|269965604|ref|ZP_06179717.1| putative efflux pump channel protein [Vibrio alginolyticus 40B] gi|269829672|gb|EEZ83908.1| putative efflux pump channel protein [Vibrio alginolyticus 40B] Length = 462 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 98/456 (21%), Positives = 207/456 (45%), Gaps = 28/456 (6%) Query: 9 SLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L V L+GC + +Y P + + P + + +++D WW +FND +LN+ + Sbjct: 15 ALIAVWLSGCGSLMRSDYQAPDVQV-PANWQQMHVAGDVSMD--PWWLAFNDPTLNQYIT 71 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LD 121 L QN + AT + A+ + + DLFP+ +S S + +L + + L Sbjct: 72 QVLAQNNDLTLATLTLKKARLQLGLAQDDLFPTLSSSTSGQAQKSLDSGESADSYSTNLS 131 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQ 179 ++++DL+G + + A + +Q D ++++ Y + ++R++++ + Sbjct: 132 VNYELDLWG-KISADVDQAKWSAMASQQDREATAQSLVATTASLYWQIGYLQQRLNLSQR 190 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++L ++ GA +L +++ + + S+++ E+S + + L Sbjct: 191 NVVDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLEANNAFAILFNQ 250 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 P +Q P+L ++G P+DL+ RPDI+ + ++A A D Sbjct: 251 PPKSISANIQMLPEGDMPSL----SVGAPSDLLIRRPDIKAAIYDVKAALANKDAADLDY 306 Query: 300 YPSLSLNGSI-----ALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P L+L G++ AL S P G S G + LP ++K++ A+ Q Sbjct: 307 LPKLTLTGALGGSSQALKDLLSNPIG-----SLGADMTLPFLQWNEMKNSQAIADLDYQS 361 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +++++ + A ++VENAL++ + K +LQ + + S+ Y+ G S++D Sbjct: 362 AIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAARYQYGSTSIMD 421 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ + T + L + + V LY ++G Sbjct: 422 YLNAQEDTRNAQASLLENRYNQFLTQVTLYQSLGGA 457 >gi|330945877|gb|EGH47250.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 259 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 17/225 (7%) Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 QL W+ D++G+ RR +E+ AN ++ A + +L++ S+L+ +Y+ R E+ + Sbjct: 44 QLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRVIDEQKRLL 103 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 +D Y++++ L+ ++ G + ++ + + ++KS ++D+ L + I+ L+ Sbjct: 104 ESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQYENAIAVLM 163 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G +F N IP I G+P+ L+ RPDI E+ + + A IG Sbjct: 164 GMAPADF---------NLPATTSIPQLPQIPPGLPSQLLERRPDIAAAERSVMGANANIG 214 Query: 294 IAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 +AK+ YP +L G + T N N WS GP+L L +F Sbjct: 215 VAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLF 259 >gi|218894258|ref|YP_002443127.1| putative outer membrane protein precursor [Pseudomonas aeruginosa LESB58] gi|218774486|emb|CAW30303.1| probable outer membrane protein precursor [Pseudomonas aeruginosa LESB58] Length = 492 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 117/477 (24%), Positives = 211/477 (44%), Gaps = 54/477 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTL-----KWWESFNDTSLNKLV 65 IVL AGC V E +P+ L P G S + + + WW D L++L+ Sbjct: 19 IVLAAGC-VTSEGLEPNARLQPAGALQAGRSLDGVALSPATWPRQDWWTGLGDRQLDQLI 77 Query: 66 KIALQQ--NLTILQATERINA---------------AKENILSVRADLFPSSYAS--ISH 106 ALQ +L I +A R A AK + +RA P+S A + Sbjct: 78 GEALQGTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGIRA---PTSVAPAPLGG 134 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 R+ +K S G ++ DL+G +R E++L ++A A++ + + + +Y Sbjct: 135 RY-SAIKYLSLG---FNYDFDLWGGERAAWEAALGQANAARIDSQAARIGLSASIARAYS 190 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D H +A + L ++ ELS + + G SK+ L + + ++ + + E+ Sbjct: 191 DLAHAFTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQLATARQQLSAAEQD 250 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ LLG L + Q N +L +P +PA+L+ R DI ++ Sbjct: 251 IASARIALAVLLGKGPDRGLELQRPQPLN-PASLSLPSV--LPAELLGRRADIVAARWRV 307 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + I AK++ YP+L+L G AL + + + P + LPIFD G+ ++ Sbjct: 308 EAARRNIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAPAISLPIFDGGRRRA 367 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ ++ + +T++ A+ EV + L + ++ V + A ++ + + L+M Sbjct: 368 NLAERDADYDLAVGQYNKTLVQALGEVSDDLGKLRSLEQQVIDQRQARDIARSNFDLAMR 427 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI----AIGSGYNP 452 Y +G S LD L +++ L +A+RQLA +DL + A+G G+ P Sbjct: 428 RYGEGVGSYLDALSVQQ-------QLLVAERQLASLESQQIDLSVQLVQALGGGFQP 477 >gi|254199704|ref|ZP_04906070.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|254206027|ref|ZP_04912379.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|147749300|gb|EDK56374.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|147753470|gb|EDK60535.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] Length = 486 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 46 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 105 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 106 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 165 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 166 TLATSVARTYNQLAQLYALRDIAGREISNRQTVDKITDGRVGAGLDTNVERQTARGNIAT 225 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 226 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 283 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 338 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 339 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 398 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 399 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 455 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 456 ALGGGFD 462 >gi|296158777|ref|ZP_06841606.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] gi|295890982|gb|EFG70771.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. Ch1-1] Length = 502 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 190/422 (45%), Gaps = 24/422 (5%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 +L W F D L +L+ AL+ + +I QA RI A I S R+ L+P SY+ Sbjct: 62 SLDWANQFGDPQLPRLIAEALEGSPSIAQAQARIAKASSYIESSRSALYPKVNGSYSWNR 121 Query: 106 HRFIPNL----------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F N + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELFSANALYPPPYGGTWYSENNVLASASWDLDLWGKNRQRLGQAVSQEKAAEADMQQARV 181 Query: 155 NVISKLIPSYID-ARHFKERISIAHQILDLYKKNI-ELSHLKFTQGATSKLSLVKLEAEI 212 + + + +Y A+ + R A +I + +++I +++ + T G + + I Sbjct: 182 TLAASVASTYNQLAQLYALRDIAAREIAN--REDIGRITNGRVTAGLDTNVERQTANGNI 239 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++++ L+ + + + LLG L Q + +P N+ PADL+ Sbjct: 240 ATSQANLTDLDGQITVVRYQLGALLGKGPDRGLQIAQPALTRGDA-VALPDNL--PADLV 296 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 R DI ++ ++ + AK++ +P ++L G A + FGP Sbjct: 297 ARRADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTSASRQIQFGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 ++LPIFD G ++S +R + + + +T+++A+ +V ++SI + Q A Sbjct: 357 IHLPIFDAGALRSQLRGRYADFELDVANYNQTLISALSDVATQVSSIRSIDQQQGDAQRA 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ K+ L++I Y+ G L +L ++ E ++ K + + L A+G G Sbjct: 417 LDASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAAEQTVTNLKMRRRDMQIGLIKALGGG 476 Query: 450 YN 451 ++ Sbjct: 477 FD 478 >gi|126452748|ref|YP_001066037.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|254179977|ref|ZP_04886576.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|254188612|ref|ZP_04895123.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|254259000|ref|ZP_04950054.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|126226390|gb|ABN89930.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|157936291|gb|EDO91961.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|184210517|gb|EDU07560.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|254217689|gb|EET07073.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 493 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/427 (21%), Positives = 184/427 (43%), Gaps = 34/427 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L KL+ AL+ N TI QA RI A I S R+ L P + A S Sbjct: 53 SLDWANQFGDPQLPKLIDEALEGNPTIAQAQARIAKASSYIESSRSTLLPKADAKYSWTR 112 Query: 108 --------FIP----NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F P + + + W++DL+G+ R + ++++ +A A + A++ Sbjct: 113 ELYSGNALFPPPYGGQWYSENNALASASWELDLWGKNRARLNAAVSQEKAAEADLQQARV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + I + Sbjct: 173 TLATSVARTYNQLAQLYALRDIAGREISNRQTVGKITDGRVGAGLDTNVERQTARGNIAT 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + L+ + ++ LLG L Q + + + +PADL+ Sbjct: 233 SQSTLSDLDGQITNVRYQLAALLGKGPDRGL---QIAAPVLSAGGAVALPENLPADLVSR 289 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFG 327 RPD+ ++ ++ + AK++ +P ++L ++F G+ FG Sbjct: 290 RPDLVAARWQVEAAMHDVKEAKAEFFPDINLAAGFGF---DAF-GWGRFLNFASRQAQFG 345 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + +T++NA+ +V + SI + Q Sbjct: 346 PAIHLPIFDGGALRAQLKGRYADFDLSVANYNQTLINALNDVATQVASIRSVDTQMGDAQ 405 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYI 444 A++ ++ L++I Y+ G L +L+ + A + +L + +R L + L Sbjct: 406 RALDASTRAYELAVIRYKAGLSPQLQVLNADSNRLAAEQTVTNLKMRRRDL---QIGLVK 462 Query: 445 AIGSGYN 451 A+G G++ Sbjct: 463 ALGGGFD 469 >gi|260061140|ref|YP_003194220.1| putative outer membrane protein [Robiginitalea biformata HTCC2501] gi|88785272|gb|EAR16441.1| probable outer membrane protein [Robiginitalea biformata HTCC2501] Length = 500 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 111/472 (23%), Positives = 195/472 (41%), Gaps = 49/472 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESF 56 +FSLF +L T + P++ SI + L ++ TL +WWE F Sbjct: 36 VFSLFALLF--------LTFSFIGCGPSRESIQPTTGLDSLQTLSAAGEVPLPQRWWEQF 87 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRADLFPSSYASISHRFIPNLK 113 +D L L+ AL +N + A ER A+ + +R F S R P+ Sbjct: 88 DDPQLEGLIDSALTRNFNLAAAWERFRQAQFVLKREKGIRWPQFEGGAQSAISRPQPDFA 147 Query: 114 TNSTGQLDS--DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 Q + ++IDL+G I + L ++ AQ +A S + + + F Sbjct: 148 GGENIQFGASAQYEIDLWG---RIGTGL-RAEAYRAQASLADYRTASLSLAAEVSLTWF- 202 Query: 172 ERISIAHQILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 R+ A Q L L K I+ L +F G + +++ + ++S + E+ Sbjct: 203 -RLKAARQQLALAKDQIQTNEDIFRLIRARFGGGQVRAVDILRQQQLLESTRNQRLIFEQ 261 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + H ++ LLG ++ +F P L + G+P +L+R RPDI+ Sbjct: 262 NVALLEHQLAILLGKQPQAI---DPPEAQDF-PELPALPSTGLPLELVRRRPDIQQAYLT 317 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--GPKLYLPIFDKGKIKS 342 L + A YP LSL S N + W++ + P+F G + + Sbjct: 318 LHAADRDYATAVRAKYPRLSLRLS-GQQRANDYESLFQEWAYTLAGNIVAPLFYGGSLSA 376 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R+E++ QE + +TVL A +EVE+AL + L+ ++L +K+ Sbjct: 377 EANRSEAARQEAIYNYGQTVLTAFQEVEDALVQEQVQASRLEILEKQLDLAQKTNGQLRN 436 Query: 403 NYRQGRYSLLDI---LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G LD+ LD E+ + +D +A+ ++ V LY A+ + Sbjct: 437 EFLNGFSPYLDVLLGLDQEQQLKRDLIDARLAQLEI---RVGLYRALAGSFE 485 >gi|307730023|ref|YP_003907247.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307584558|gb|ADN57956.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 510 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 88/420 (20%), Positives = 185/420 (44%), Gaps = 20/420 (4%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 +L W F D L KL+ AL+ + +I QA R+ A I S R+ L+P SY+ Sbjct: 62 SLDWANQFGDPQLPKLIAEALEGSPSIAQAQARLAKASSYIESSRSALYPKVTGSYSWTR 121 Query: 106 HRFIPNL----------KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F N + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELFSGNALYPPPYGGTWYSENNVLASASWDLDLWGKNRQRLGQAVSQEKAAEADMQQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + ++ ++ +++ + G + + I + Sbjct: 182 TLAASVASTYNQLAQLYALRDIAAREIENRQEIGRITNGRVAAGLDTSVERQTATGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S++ L+ + + + LLG L + K + + + +P N+ PADL+ Sbjct: 242 SQSNLTDLDGQITVVRYQLGALLGKGPDRGLQ-IAKPALSVGGAVALPDNL--PADLVAR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R DI ++ ++ + AK++ +P ++L G A + FGP ++ Sbjct: 299 RADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTAGSRQIQFGPAIH 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G ++S ++ + + +T++ A+ +V ++SI + Q A++ Sbjct: 359 LPIFDAGALRSQLKGRYADFDLDVANYNQTLIKALSDVATQVSSIRSIDQQSGDAQRALD 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ L++I Y+ G L +L ++ E ++ K + + L A+G G++ Sbjct: 419 ASTKAYQLAVIRYKAGLSPQLQVLTADQNRLAAEQTVTTLKMRRRDLQIGLIKALGGGFD 478 >gi|172064285|ref|YP_001811936.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171996802|gb|ACB67720.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 488 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/409 (22%), Positives = 173/409 (42%), Gaps = 62/409 (15%) Query: 18 CTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESFNDT 59 C + P T P MP + QF +G + +WW + Sbjct: 21 CAMAPSSTPPAMPSPAHYGETPQPPRTAEAAGVAQQFDVGAAP------VPQWWRLYRSG 74 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENIL--SVRADLFPS--SYASISHRFIPNLKTN 115 +L+ LV L N T L ATE+ AA + L V A PS + A ++ P++ Sbjct: 75 ALDALVDEGLSANPT-LAATEKTLAAAQQELHAQVGASTLPSLDANAQVARTRTPDISGT 133 Query: 116 ST---------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQL + + DLFG R+ +S A +D +++ A+ + + ++ + I Sbjct: 134 GAQTLRYNVFVGQLQAHYTFDLFGATRYANAASAARVDVRACELEAARRALAANIVGTAI 193 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 A +I + +++ + + ++ GA S + S+ + +P L + Sbjct: 194 SAAALDRQILLTERLVTIAASSAHDDAQRYALGAISHAQALASTQSAASLAATLPALRQQ 253 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQP-----NLYIP--INIGIPADLIRNRPDI 278 VH ++ LLG + + P +L +P + + +P+DL++ RPDI Sbjct: 254 RATTVHALAILLG-----------RTPDAVPPIPAFGSLSLPEHVPVVVPSDLLKARPDI 302 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPI 334 R E + + A G A + L+PSLSL ++ S+P G W+ G L P+ Sbjct: 303 RAAEAAVKAAAADAGEATAQLFPSLSLTATLG-RGGFSWPALLSGAGGLWAVGAGLSQPL 361 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 F G + ++ R S + ++ VL+A +V ++L +++ D + + Sbjct: 362 FHGGALLAHRRATFDSYDAAVLQYKSAVLSAFGDVADSLAALDNDAQTL 410 >gi|160883421|ref|ZP_02064424.1| hypothetical protein BACOVA_01390 [Bacteroides ovatus ATCC 8483] gi|293371135|ref|ZP_06617672.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] gi|156111141|gb|EDO12886.1| hypothetical protein BACOVA_01390 [Bacteroides ovatus ATCC 8483] gi|292633793|gb|EFF52345.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides ovatus SD CMC 3f] Length = 454 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 106/465 (22%), Positives = 205/465 (44%), Gaps = 40/465 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+++ DT L W E F D L Sbjct: 6 ILSAATLILSSCGI---YNK-YKPVSEVPEGLYGSESVAATDTANFGNLSWREVFTDPYL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNSTG 118 LV AL +N + A R+ A+ +L+ + PS + + + F T + Sbjct: 62 QNLVDSALLRNTDMQTAHLRVKEAEATLLTSKLSYLPSLFLAPEGAASSFDRGKATQTYS 121 Query: 119 -QLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K +++ + +Y + Sbjct: 122 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVASVANTYYTLLMLDSQ 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA +K+++ + G ++ L + EA +I + + L++ +++ Sbjct: 179 YEIAVATEAAWKESVNATRAMKKAGMVNEAGLAQTEATYFNICTTVLDLKEQINQAENSL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL E H +Q+ N +P N +G+P ++ NRPD+R E LA + Sbjct: 239 ALLLA----ETPHKIQRGKLG---NQQLPENFSVGVPLQMLANRPDVRSAEFSLAQAFYT 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A Sbjct: 292 TNAARAAFYPSITLSGSAGWTNSAGSMIVNPG-KFLASAVASLTQPLFNKGANIAQLKIA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ +E +++++T+LNA EV AL + E K +++ KS SL M Sbjct: 351 KAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKADYYNKQVASLQTAAKSTSLLM--- 407 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L ++ ++ + + + LY A+G G Sbjct: 408 KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 452 >gi|116051931|ref|YP_789226.1| putative outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115587152|gb|ABJ13167.1| putative outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 496 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/444 (20%), Positives = 197/444 (44%), Gaps = 42/444 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + P+ L T +I + +WW+ + D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPQAATLDANALATDHAIQAAAREAGWPQAQWWKVYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ ++ AL N + A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESPQIEGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIALNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGIGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + ++ L G E +++ S N +P +PA+L+ RPD+ + ++ Sbjct: 245 IQLTRNLLAALAGKGPGEG-STIRRPSLNLAAQPSLPS--ALPAELLGRRPDVVARRWQV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKI 340 A + +A++D YP++ L S+ + F +S GP + LPIFD G++ Sbjct: 302 AALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGRL 361 Query: 341 KSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 +S + A + +A EQY +T+++A+K + + L S++ K + +V + Sbjct: 362 RSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDIQKDFAAQ---SVASAQ 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIE 418 K+ ++ + Y++G L++L+ + Sbjct: 416 KTYDIATLAYQRGLTDYLNVLNAQ 439 >gi|110639242|ref|YP_679451.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] gi|110281923|gb|ABG60109.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406] Length = 441 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 97/452 (21%), Positives = 205/452 (45%), Gaps = 56/452 (12%) Query: 39 GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 GNSK+ N +KW E F D +L L+ AL N + IN A+ + + + P Sbjct: 5 GNSKDTTNTALVKWREYFTDPTLISLIDTALHNNQELNITLYEINVAQAEVRARKGMYLP 64 Query: 99 ----------------SSYASISH-------RFIPNLKTNSTGQLDSDWKIDLFGQRRHI 135 + + ++ + IP + + L++ W++D++ + R+ Sbjct: 65 NVSVGAGAGAEKVGRYTRFGAVDQTTDIEPGKRIPEVLPDYQIGLNASWEVDIWKKLRNA 124 Query: 136 ESS-----LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 + + LA+++ V N+++++ +Y + ++ I + +D+ +++ Sbjct: 125 KQAAVYKYLASIEGKNFMVT----NLVAEIASNYFELLALDNQLDILKKNIDIQNNALKI 180 Query: 191 SHLKFTQGATSKLSLVKLEAEI---KSIESDI--PTLEKSFRMNVHNISTLLG-YPATEF 244 ++ ++L++ + EA++ +S++ DI +EK R+N L+G YP Sbjct: 181 VKMEKQSAKVTELAVRRFEAQVYYTQSLQFDIQQKIIEKENRINF-----LVGRYPTP-- 233 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 +++ + +F + I G+P L++NR DI+ E LA + + +AK++ YP+L Sbjct: 234 ---IKRNAESFINIIPDTIYKGVPPQLLQNRADIKRAENDLAAAKLNVKVAKANFYPTLR 290 Query: 305 LNGSIALTHDNSFPGY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 L G I N P + + +S L P+ ++ +IK+ A + + + Sbjct: 291 LTGGIGYEAFN--PKFIISSPESMMFSLAGTLVTPLINRNEIKAIYIGANAKQIQAVYNY 348 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + T+LNA EV N L I+ K V+ +S+++S + R +++L + Sbjct: 349 ERTILNAYIEVVNQLAKIDNLGKSYDLKFLQVQALNESVTISNGLFTSARADYMEVLLTQ 408 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R + +++L K++ + V Y A+G G+ Sbjct: 409 RDALESKMELIETKKEQINAMVYFYRALGGGW 440 >gi|330873149|gb|EGH07298.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 486 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 97/472 (20%), Positives = 208/472 (44%), Gaps = 30/472 (6%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFND 58 L+ + L + L+ V KP +LP T +I ++ + +WW ++ D Sbjct: 9 LKPLGILALTLVISACVATHGIKPQGSVLPADRLATDQAIQSAARDAHWPAAQWWRAYGD 68 Query: 59 TSLNKLVKIAL--QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 L++ +++A +L + A R A I L S AS+ P+ + Sbjct: 69 AQLDRWIELATLGSPSLALAAARVRQARAMAGIAESSESLQVQSSASLMRHAWPDDQFYG 128 Query: 117 TGQLDS------------DWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPS 163 G L + +DL+G+ R+ E +L + A+ A+L + ++ + Sbjct: 129 PGALADTRTWDNNASLGLSYALDLWGRERNKSEQALDLAHVSAAEQRQAQLELQENVVRA 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 YI R+ IA L ++ ++L+ + T G + + + E + I L+ Sbjct: 189 YIQLSLNYARLDIAEAALTQQQQILDLAQRRLTGGIGTHFDVSQAETALPEAHRQIDALQ 248 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ ++ + ++ L G + + +Q+ + + L +P +PA+L+ RPD+ Sbjct: 249 EAIALSRNQLAALAGKGPGQGVE-LQRPALSLHTELKLPS--ALPAELLGQRPDVVAARW 305 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGY----NTHWSFGPKLYLPIFDKG 338 ++A I +A ++ YP++ L GS+ + S G+ ++ GP + LPIFD G Sbjct: 306 QVAARERGIDVAHANFYPNVDLLGSLGYMATGGSMLGFLSGSKLSYTVGPAISLPIFDGG 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-TSINEDKKIVTKLQHAVELHKKSM 397 +++ + A +S + +T++ A+K + + L + DK+ V + +V +K+ Sbjct: 366 RLRGELGEASASYDMAVARYNQTLVMALKSISDQLIRRASMDKQRVFAAE-SVASAQKTY 424 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++I +++G L++L+ + + + +Y L +A+G G Sbjct: 425 DIALIAWQRGLTDYLNVLNARTLLFRQQQIQQQVEAARLTAYAGLTVALGGG 476 >gi|322831473|ref|YP_004211500.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] gi|321166674|gb|ADW72373.1| RND efflux system, outer membrane lipoprotein, NodT family [Rahnella sp. Y9602] Length = 484 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 120/476 (25%), Positives = 202/476 (42%), Gaps = 47/476 (9%) Query: 10 LFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVK 66 LF VL LAGC P LL TQ + + ++ T+ +WW S ND L+ L+ Sbjct: 12 LFAVLTLAGC-ASSNNIAPQSSLLDTQ-QLHLQQEKVSSLTIGPQWWRSLNDPQLDNLMT 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKT----- 114 LQ + ++ QA R+ A+ + A P + ++ IP T Sbjct: 70 TTLQNSPSLRQAAARVREAQSVMGEADAANGPYLDLNGSTRRERVAKNTIPPFLTSYPEA 129 Query: 115 ------NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 NS G L+ ++ D +G+ R + ++ A +DSA A+ A L + S + +Y Sbjct: 130 PIYDSSNSLG-LNLSYEFDWWGKYRNQVNAAKAQVDSARAEQAEAALTLTSSVASAYYQL 188 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + + +D + +L ++ G + +A+ S + I L+ Sbjct: 189 QADLALQDVLQHEVDNNQHLADLRKAQYQAGVYGVEIPQQTQAQADSAKQQIINLKAQTE 248 Query: 228 MNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H +S L G A LH + S P+ P + DL+ RPDI Q + Sbjct: 249 QLRHQLSALAGRGPDAMNGLHAVALPS----PDALAPKG-ELTLDLLGKRPDIAAQRDLV 303 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-------FPGYNTHWSFGPKLYLPIFDKG 338 ++ AK + YPSLS++ LT N F + W+ P + LPIF G Sbjct: 304 ESYSQRVSAAKKEFYPSLSISAFGGLTTTNYGGTSPNLFEAASKAWNIAPAISLPIFHAG 363 Query: 339 KIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK--- 394 ++S + ES+ +Q + ++ +T+LNAI++ +A+T K V +LQ A K Sbjct: 364 ALRSKLGE-ESALYDQSVESYNQTILNAIQQTADAITV---SKSSVEQLQQASSAAKSLE 419 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +S Y G ++L + A + + A QL ++ + L A+G GY Sbjct: 420 EVYRVSDARYNAGVIGRDELLTSQSALLQQQQAQLTASSQLMQAKISLIRALGGGY 475 >gi|237720204|ref|ZP_04550685.1| multidrug efflux pump channel protein [Bacteroides sp. 2_2_4] gi|229450756|gb|EEO56547.1| multidrug efflux pump channel protein [Bacteroides sp. 2_2_4] Length = 454 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 105/465 (22%), Positives = 204/465 (43%), Gaps = 40/465 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+++ DT L W E F D L Sbjct: 6 ILSAATLILSSCGI---YNK-YKPVSEVPEGLYGSESVAATDTANFGNLSWREVFTDPYL 61 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNST 117 LV AL +N + A R+ A+ +L+ + PS + ++S + Sbjct: 62 QNLVDSALLRNTDMQTAHLRVKEAEATLLTSKLSYLPSLFLAPEGAVSSFDRGKATQTYS 121 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K +++ + +Y + Sbjct: 122 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVASVANTYYTLLMLDSQ 178 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 IA +K+++ + G ++ L + EA +I + + L++ +++ Sbjct: 179 YEIAVATEAAWKESVNATRAMKKAGMVNEAGLAQTEATYFNICTTVLDLKEQINQAENSL 238 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL E H +Q+ N +P N +G+P ++ NRPD+R E LA + Sbjct: 239 ALLLA----ETPHKIQRGKLG---NQQLPENFSVGVPLQMLANRPDVRSAEFSLAQAFYT 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A Sbjct: 292 TNAARAAFYPSITLSGSAGWTNSAGSMIVNPG-KFLASAVASLTQPLFNKGANIAQLKIA 350 Query: 348 ESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ +E +++++T+LNA EV AL + E K +++ KS SL M Sbjct: 351 KAQQEEARLSFEQTLLNAGVEVNEALVQYQTAREKADYYNKQVASLQTAAKSTSLLM--- 407 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + L++L ++ ++ + + + LY A+G G Sbjct: 408 KHGNTTYLEVLTAQQTLLNAQLSQVANRFTEIQGVITLYQALGGG 452 >gi|226947136|ref|YP_002802209.1| multidrug efflux pump RND family outer membrane protein [Azotobacter vinelandii DJ] gi|226722063|gb|ACO81234.1| multidrug efflux pump RND-family outer membrane protein [Azotobacter vinelandii DJ] Length = 505 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 102/484 (21%), Positives = 194/484 (40%), Gaps = 62/484 (12%) Query: 17 GCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 GCT+ P+Y +P P+ ++ N+ D + W E F D +L +LV++AL Sbjct: 18 GCTLIPDYLRPAAPVEAAWPEGAAYAPERPANVPAAD-VGWEEFFRDPALKQLVELALDN 76 Query: 72 NLTILQATERINAAKENILSVRADLFP--------------------------------- 98 N + QA ++A + R+DLFP Sbjct: 77 NRNLRQAILNVDAYRALYRVQRSDLFPKLGVEGTQSRQRWPGDYASGGGGGSSGGISDGG 136 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN 155 + S FI + G S W++D FG+ R + + A D Y ++ + N Sbjct: 137 GAGGTSTSEPPAFIQTSHQVTLGT--SSWELDFFGRIRSL-TEQAKED--YLAIEENRQN 191 Query: 156 V----ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 V + + +Y R + + + L Y++++ L G +S+L + + Sbjct: 192 VHLVLVGDVATAYFAWRTDQALLKLTEATLASYEESLALIEASEEVGVSSQLDVRQAHTL 251 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + + + +V+ + L+G +P+ + + G+P+ Sbjct: 252 VDQARAQKSLYTRQIAEDVNALRLLIGGAFPSD------LPAGLDVNDEMLAGFPAGLPS 305 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 DL+ RPDIR E +L + A IG A++ +PS++L G+ + F + WS Sbjct: 306 DLLLRRPDIRAAEHRLLAANASIGAARAAFFPSVTLTARAGTASRELSGLFDAGSGSWSA 365 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P + +PIF G ++ ++ A+ + ++ ++ A +EV + L + + Sbjct: 366 LPTINIPIFTFGDLRGSLEYAKLQKEINVAAYEYSIQTAFREVADGLAARGTYDTQLKAQ 425 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V+ ++ L+ Y +G S L +LD +R + L + V LY A+ Sbjct: 426 GDLVDNNQAYYELARQRYEEGVDSYLSVLDAQRELFSAQQQLLNDRLLQLNGEVGLYRAL 485 Query: 447 GSGY 450 G G+ Sbjct: 486 GGGW 489 >gi|312892479|ref|ZP_07751972.1| RND efflux system, outer membrane lipoprotein, NodT family [Mucilaginibacter paludis DSM 18603] gi|311295059|gb|EFQ72235.1| RND efflux system, outer membrane lipoprotein, NodT family [Mucilaginibacter paludis DSM 18603] Length = 470 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 109/478 (22%), Positives = 216/478 (45%), Gaps = 51/478 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +L ++ L+ C V + P L P F + + + ++ + W F D +L KL+ Sbjct: 8 LALIVLFLSACKVSKDIQTPQAQL-PEHFRNAAVTSDTSSVADVAWKSFFTDATLQKLID 66 Query: 67 IALQQNLTILQATERINAA-------KENILSVRADLFPSSYASISHRFIPNLKTNS--- 116 A+ +N + A + I A+ K N + V A S + S + L + Sbjct: 67 SAIAKNYDMQIAVKNIEASQLLFKQVKWNYVPVVALNVTGSTSRPSDNSLTGLSLSQYNL 126 Query: 117 --------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS---- 163 + L W+ D++G+ R +S+LA AY Q A+ V + L+ S Sbjct: 127 GTKHIEDYSANLSLSWEADIWGKIRNQQKSALA----AYLQTVEARKAVQTTLVASVSQG 182 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + +++IA + + L + + L++ G + L++ + +A+ + IP E Sbjct: 183 YYNLLMLDAQLAIAQKNVLLNDSTLRIIRLQYDAGQVTSLAIEQAQAQQMAAAKLIPAFE 242 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQ 281 ++ + + + L G E +++ N+ + IP N+ GIP+ L+ RPD++ Sbjct: 243 QNISIQENALRILTG----ELPGKIER--NSILDQIAIPNNLSAGIPSALVSRRPDVKNY 296 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------FG---PKLYL 332 E L + A +GI K+ +YP+L + S + NSF N W FG + Sbjct: 297 ELALIIANANVGINKAAMYPALRITASGGV---NSFQASN--WFNIPASLFGIVAGSVVQ 351 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+ ++ + R A+ ++ I ++++VLNA+ EV +AL I + K + V Sbjct: 352 PLVQHKELNTQYRVAQVEREKTIIQFRQSVLNAVGEVSDALVKIEKLKTQQDIAANRVNT 411 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + + + ++ G + L+++ + + E+DL KR + +LY ++G G+ Sbjct: 412 LQQANTNANMLFKNGMANYLEVITAQSNILQSELDLVSIKRDELSAVSELYRSLGGGW 469 >gi|213963140|ref|ZP_03391398.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga sputigena Capno] gi|213954224|gb|EEB65548.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga sputigena Capno] Length = 465 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/424 (20%), Positives = 191/424 (45%), Gaps = 35/424 (8%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 + W F D +L + + AL NL + A + + +++ + +A P+ ++ Sbjct: 53 VSWRNIFTDATLQQHISKALSNNLDVRVAMQSVVSSQAYLKQSKAAFIPTLLVGANYTRS 112 Query: 110 PNLKTNSTGQL-------------DSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDI 151 N N+ G L + W+ D++G+ R S LA +++ A Sbjct: 113 TN-SINAAGGLGERTYNNLFDITGSASWEADIWGKLSAQKRASYASYLATVEAQKA---- 167 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + V++ L +Y E+ + Q ++ K++E + G+T++++ ++EA Sbjct: 168 VQSEVVATLATAYYQLLMLDEQKKVLEQTIEFRTKSLETTKQLKNAGSTTEVATKQIEAL 227 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ + T+ S + I LLG E HY+++ S + G L Sbjct: 228 VYNAQAQLITINNSVWALENTICVLLG----EEPHYIER-STLAEQQFPTEFRQGYAVSL 282 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGP 328 + NRPD+ E L ++ +A++ YP+L+L+ G I+ T D F + +F Sbjct: 283 LENRPDVARAELNLRNAFELTNVARAAFYPTLTLSARGGISSTELDTWFSAKSMFANFIA 342 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L PI ++ +I++ +++ + + +++ +L+A KEV +A+ N + + Sbjct: 343 GLAQPILNRRQIRTQYEVQKAAQETALLNFKKAILSAGKEVSDAMHQFNSQDEFIQLKTK 402 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY--VDLYIAI 446 +E ++K+ S + G + L+++ E ++ +LS+A Q + + LY A+ Sbjct: 403 EMEAYQKATDFSKQLFDSGMVNYLEVITAE--VNRLNAELSVADAQFTRMQYGITLYKAL 460 Query: 447 GSGY 450 G G+ Sbjct: 461 GGGW 464 >gi|158522906|ref|YP_001530776.1| RND efflux system outer membrane lipoprotein [Desulfococcus oleovorans Hxd3] gi|158511732|gb|ABW68699.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfococcus oleovorans Hxd3] Length = 477 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 87/411 (21%), Positives = 178/411 (43%), Gaps = 23/411 (5%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNL 112 F + L +++ +AL N + A + A+ RA+L P ++ R +L Sbjct: 62 FTEPRLVQVIDMALASNRDLRTAALNVERARAYYRISRAELLPKINATGTGYKGRVPADL 121 Query: 113 KTNSTGQLDSD---------WKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIP 162 ++ + + W+IDLFG+ R +++ +L + A A++ ++S+ Sbjct: 122 SSSGSAMTVEEYNVNLGITAWEIDLFGRIRSLKARALEEFLATEAARRGARILLVSETAG 181 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++ E + +A L + ++ + G +++ L + + ++ S + L Sbjct: 182 AWLTLAADTETLDLAQSTLATRQVARDMVARRVEVGLAAEIDLHQAQTQVDEARSAVARL 241 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ L G P E L P+L G P++++ NRPDIR E Sbjct: 242 TAQVAKDRNALNLLAGGPVPEELLPRSLDEMTVLPDL----AAGTPSEILLNRPDIRQAE 297 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-YNTH---WSFGPKLYLPIFDKG 338 +L + A IG A++ +PS++L G++ T + G ++T WSF PK+ +PIFD Sbjct: 298 SRLKAAYANIGAARAAFFPSITLTGTLG-TASSELSGLFDTESDTWSFAPKISMPIFDP- 355 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + S ++ + + +++ + A +EV + L S ++ + V + Sbjct: 356 RTWSALKVTKVDREIALAQYEKAIQTAFREVADTLASRGTLQEQLDAQASLVRATAEICR 415 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ Y G L +LD +R+ L + S + LY +G G Sbjct: 416 IAQARYDAGAMIYLGVLDAQRSLYAARQGLIAVRLADMASRIRLYAVLGGG 466 >gi|237801108|ref|ZP_04589569.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023965|gb|EGI04022.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 462 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 190/422 (45%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSAELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++ + Y +E+ IA L + ++L ++ G+ + L L + + + + Sbjct: 168 LLGNVADRYAQTLAAREQGRIAGLNLGNAQNVLKLVQTRYDSGSATALELAQQKNLVAAQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG+P + ++ F + IN G+P+DL+ R Sbjct: 228 QRELPRIQQLANDQLITLAALLGHP----VQDIELDDQAFDSLSWPDINAGVPSDLLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +LA + A + +A++ + P L+L+ + + + S L PI Sbjct: 284 PDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + +A + +E T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 344 FNNGRLGAERDKATARQEELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 400 Query: 394 --KKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V L +A+ Q + + LY A+G Sbjct: 401 QAQAAFRIAQSRYEAGAEGLLTVLETQRTLYLAQDASVQLRLARLQ---ASIALYKALGG 457 Query: 449 GY 450 G+ Sbjct: 458 GW 459 >gi|91214626|ref|ZP_01251599.1| putative outer membrane lipoprotein [Psychroflexus torquis ATCC 700755] gi|91187053|gb|EAS73423.1| putative outer membrane lipoprotein [Psychroflexus torquis ATCC 700755] Length = 471 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 113/473 (23%), Positives = 211/473 (44%), Gaps = 41/473 (8%) Query: 5 RAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLN 62 +AI L I L L C V +Y +P + F N + ++I + W F D L Sbjct: 12 KAILVLLISLTLQSCFVAKDYERPELVETENLFRTDNLPTDSVSIADVSWKTLFTDQFLQ 71 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRF-IPNLKT 114 V+ L+ N+ + A +++ AA+ +A PS +Y +S +L Sbjct: 72 HYVEEGLRNNMDVRIAIQQMIAAEAYAKQGKAGYLPSVGIGANATYQELSENSQFGSLFN 131 Query: 115 NSTGQLDS----DWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYID 166 + Q D W+ D++G+ I S+ +AY Q K +IS ++ +Y + Sbjct: 132 EAIDQYDVTANLSWEADIWGK---IRSNKRATQAAYLQSVSGHQAVKTQLISSIVNTYYN 188 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI------KSIESDIP 220 ++ + + + + ++E +K + A +++LV ++ + K+++ DI Sbjct: 189 LLALDAQLEVTKETITTRESSVE--TIKALKDA-GQVTLVAVDQNVAQYNNAKALQVDI- 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 E + + +S LLG F ++S+ + + I +G+PA L+ NRPD+ Sbjct: 245 --EIAIFKTENTLSILLGKAPQHF-----ERSSLDKQKIEQDITLGVPATLLSNRPDVMA 297 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L S +A S+ YPSL+L G +L DN + + L P+F++ Sbjct: 298 AEYSLIQSFELTNVAISNFYPSLTLTASGGFQSLELDNLLSVNSLFANILGGLTQPLFNQ 357 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 ++K+ + ++ + ++ T+L A EV NAL S + K ++ VE + + Sbjct: 358 RRLKTQKEVTLAQQEQSLLLFKRTLLVAGGEVSNALFSYKSETKKFEFRKNEVEALRAAE 417 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S S + G + LD+L + E+++ +K Q + VDLY A+G G+ Sbjct: 418 SNSEALLKNGYANYLDLLTARESALTAELNIIDSKLQQLVAIVDLYEALGGGW 470 >gi|227536648|ref|ZP_03966697.1| RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227243449|gb|EEI93464.1| RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 474 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 108/483 (22%), Positives = 227/483 (46%), Gaps = 45/483 (9%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPL-LPTQF-SIGNSKNLIN-IDTLKWWES 55 MNI ++F++ +L+GC E H+P+ LP + G K N I ++ W E Sbjct: 1 MNIKFYSVTIFLITLILSGCKT--ERLATHIPVTLPDNYRESGALKTDTNTIGSIPWREF 58 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------------- 99 F DT L +L+ A++QN+ + A++++ A++ + +A P+ Sbjct: 59 FKDTMLQQLIDSAIRQNMDMQLASKKLEASRLLLNQAKAGNLPTLQLRVNATSTNPSNNS 118 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 + S++ N + T L W+ D++G+ I++ A ++Y Q + A+ V + Sbjct: 119 MNGLSLNQFLGANHVEDYTAALSLSWEADIWGK---IKNQKAAALASYLQTEEARKVVQT 175 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELS-------HLKFTQGATSKLSLVKLEAE 211 +L+ + ++ + +Q+ D+ KKN+ LS ++ G S L++ ++ A+ Sbjct: 176 QLVSQVAQGYY---QLLMLYQLQDIAKKNLRLSDSTLRIVQYQYEVGDISSLAVEQVAAQ 232 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + IP E+ ++ + IS L G + H + + L + +GIPA + Sbjct: 233 RLAAAALIPDFEQQVQIQENAISVLSG----QLPHAIATTATLNTITLPEHLQVGIPAAM 288 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG--- 327 + RPD++ E +A + A AK+ +YPSL ++ + S +N S FG Sbjct: 289 LSRRPDVKSAELAIAAAQANQQTAKASMYPSLVISADAGVNAFKSSNWFNLPASLFGVVA 348 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + PI + ++++ + ++ I ++++V+ A+ EV +A+ SI + K+ Sbjct: 349 GSITQPILQRKQLRTQYEVSRVEQEKSVIRFKQSVITAVGEVSDAMISIRKLKEKEVIAA 408 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ + + + G + L+++ + + E++L+ K+ + VDLY A+G Sbjct: 409 DRTNRLRNAIGHADLLFETGMATYLEVITAQSNVLQSELELAQLKKAELAAIVDLYRALG 468 Query: 448 SGY 450 G+ Sbjct: 469 GGW 471 >gi|296447346|ref|ZP_06889273.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] gi|296255125|gb|EFH02225.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylosinus trichosporium OB3b] Length = 523 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 104/484 (21%), Positives = 196/484 (40%), Gaps = 62/484 (12%) Query: 15 LAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQ 71 L+GC + ++ KP + P F + W F L L++ AL Q Sbjct: 32 LSGCVL--DWQKPEASVETPPTFQAAKTPRAAPPIAAAPGWSRGFGSPELTSLIQKALDQ 89 Query: 72 NLTILQATERINAAKENILSVRADLFP--------------------------------- 98 NL I A RI A + L+P Sbjct: 90 NLDIAAAVARIEQADAQARVNSSPLWPTLNMNDIARRSQTPAGITSATSTSASTNTTTTS 149 Query: 99 ---SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKL 154 SS + + RF QL + ++ID +G+ + ++ L A D+ ++ Sbjct: 150 GAGSSSLAGTRRF-----NFFQAQLTASYEIDFWGKNQDASNAARLLAHASRFDRDVVEI 204 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + I+ + SY ++RI IA + + + + + G + L + E+ + + Sbjct: 205 STIASVTNSYFQVLTAQDRIRIAKDNIKIAETVLAAIKARLDVGTATALDYSQQESVVAT 264 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE++ R + ++ L+G P + + + Y I G+P++L+ Sbjct: 265 QRATLPPLEQTLRQTKNTLAVLMGLPPETSIV----KGGSLTRLRYPKIEPGLPSELLLR 320 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPK 329 RPDI E KL + + A++ +PS+ + G S+AL + F W Sbjct: 321 RPDIAEAEAKLESAEFSVLQARAAFFPSIQVTGYYGVQSVALR--SLFRPDAIAWQIAGN 378 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+FD ++ + + E T+Q+T+L A +VENAL +I E ++ + A Sbjct: 379 LAQPVFDGYNLQGQLLLQKGKYAELAQTYQKTILTAFSDVENALIAIEETRRQLKLQGEA 438 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA--KSYVDLYIAIG 447 +K+ ++ R+G ++ + E T + +A+ +LA ++ LY A+G Sbjct: 439 AAAARKAYEVADARMREGTIDIITLSTTE--TTMFQSQDVLAQVRLAHFQAATSLYQALG 496 Query: 448 SGYN 451 G++ Sbjct: 497 GGWS 500 >gi|226228927|ref|YP_002763033.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] gi|226092118|dbj|BAH40563.1| outer membrane efflux protein [Gemmatimonas aurantiaca T-27] Length = 465 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 95/472 (20%), Positives = 202/472 (42%), Gaps = 60/472 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------KWWESFNDTSL 61 L LAGC P G I D+L WW++F +L Sbjct: 4 LLAASLAGCASAPR---------------GGVATSIAPDSLVRDAGSSDPWWQAFGSPAL 48 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADL--FPSSYASIS---HRFIPNLKTN- 115 + L+ AL+ + ++ A + ++E +++ RA + +P + A + R P + Sbjct: 49 DTLIAEALRASPSVAAAEATLRQSEE-LVAARAGMNRYPQADAILGAQQQRVNPAMFGQP 107 Query: 116 --------STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + + +++DL G RR +E+ A D Q+ A+L + + + + + Sbjct: 108 GTPREFGLQSATVSVRYRLDLTGGNRRALEALAARSDHQRFQLAGARLTLSAMIATAAVQ 167 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ +IL ++++ +S + GA S ++ + + +D+ + Sbjct: 168 QAQLSAQLDATQEILRQQEEDLTISGERVRLGAASPDEVLTHRSRVAQTRADLLAQQSLG 227 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQP-----NLYIPINIG--IPADLIRNRPDIR 279 + N H ++ L G ++ P +L +P ++ +P++++R RPDI Sbjct: 228 QQNAHLLAVLAG----------REPGATLPPRFTLSDLKLPADLPAVVPSEVLRGRPDIL 277 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E + + A+ G+A + LYP L L+ S+ ALT F + W+ +L P+F+ Sbjct: 278 AAEALMRAADAEHGVAVARLYPQLDLSASLGTQALTSGVLFGSGSAVWTLLAQLTQPLFN 337 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G +++ R + ++ +Q VL +++ + L +++ D +++ +L A E + + Sbjct: 338 PG-LRAEKRASLAAFDAAASHYQGVVLESLRNTADLLVALDHDARVLEELTSADEAARAA 396 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ Y G ++L + +V V L A+ + V L+ A+G Sbjct: 397 LTSVQRQYALGSVGYREVLAAGQQAQQVRVALVSARAKQLLDAVALHQAVGG 448 >gi|46201393|ref|ZP_00055160.2| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 444 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 93/450 (20%), Positives = 189/450 (42%), Gaps = 28/450 (6%) Query: 20 VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQAT 79 +G EY +P P P + N+ WW F L++L+ A N + AT Sbjct: 1 MGDEYVRPATPP-PAGWKNAAQGNVW--PGADWWRQFGSARLDELMARARAANFDLAAAT 57 Query: 80 ERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD-------------SDWKI 126 R+ A + A L PS AS S + ST + + ++I Sbjct: 58 ARVRQADAQLGIAGASLLPSVSASASETRARGSQAASTSSVSKARHTTTSSATLTASYEI 117 Query: 127 DLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 D +G + A + ++ D+ A L S + +Y + ERI + + + Sbjct: 118 DFWG-KNAAAVDAAQAAAEASRFDLQTATLTAQSGVATTYFEILGLAERIRLVRESITNS 176 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + + + + G + L + + E+ + + + + +E+ R + + ++ L G EF Sbjct: 177 EGILAVFRDRQRAGTATSLDVAQQESVLATQRATLAPMERQMRQDYNALAILTGRMPEEF 236 Query: 245 LHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + ++ L +P+ G+P++L+ RPD++ E L + A I A++ +P++ Sbjct: 237 GLVPETLAD-----LRVPVVGAGLPSELLARRPDVQSAEASLRAANADIAAARAAWFPAI 291 Query: 304 SLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 SL G+ + WS IFD GKI + + + +E T+++ Sbjct: 292 SLTGTGGFQSLDLMKMMTAQSLLWSVASSATQVIFDGGKIAGTVEQKRARFEELSQTYRK 351 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V ++ +VENAL ++ + + V + A +++ ++ G + +L+ ++ Sbjct: 352 AVASSFSDVENALIAVEKAVEEVEAQRVAEATSRRAFEIAQAQMAGGIVDVTTVLNTQKT 411 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ A+ ++ V LY A+G G+ Sbjct: 412 LFTAQDSLAQARLSQLQAIVGLYKALGGGW 441 >gi|72384018|ref|YP_293372.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] gi|72123361|gb|AAZ65515.1| RND efflux system, outer membrane lipoprotein, NodT [Ralstonia eutropha JMP134] Length = 490 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 99/478 (20%), Positives = 221/478 (46%), Gaps = 50/478 (10%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----------KWWESF 56 +F L +LAGC + + + +I N+ + +++ W + F Sbjct: 17 VFILMAAVLAGCA--------NYAGIKSDRNIANASSYATTESIPAEHGRWPSTDWADQF 68 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF----- 108 D L L+ ALQ + ++ +A R+ AA A+ P + Y+ RF Sbjct: 69 GDAQLKTLIGEALQGSPSLEKARARVAAATAFSEGANANTLPQVGAGYSWTRQRFSESTL 128 Query: 109 IP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIP 162 IP + ++ + +++ +++DL+G+ R ++S++++L ++ A+ + +L + S + Sbjct: 129 IPPPFAGSWQSENKAFINASYELDLWGKNRETLKSAVSSLHASEAEAEQVRLTLSSAIAR 188 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + IA + + + ++ + T G +++ EA + + E + +L Sbjct: 189 AYNELARLYALHDIAQDEVKQRGEALRVTDGRVTMGLDTEVEKRTAEANLAASEVALSSL 248 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + S + + + LLG L + + + + +P N+ PADL+ RPDI Sbjct: 249 DGSIQRTRYQLGALLGRGPDRGLA-IARPALGAGDEIRLPDNL--PADLVSRRPDIVAAR 305 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++ ++ I +AK++ YP ++L+ I A + S GP ++LPIFD G Sbjct: 306 WRVDATLHDIKVAKAEFYPDINLSAMIGVDAFGWGRFLRAASRTASAGPAIHLPIFDGGA 365 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH---KKS 396 +++ ++ + ++ E++ NA+ +V L+ I + I ++ +AV +++ Sbjct: 366 LRAQLKGRYAEFDFAVASYNESLTNALTDVAIQLSDI---RAIDAQIGNAVRTDTAAQRA 422 Query: 397 MSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++L++ Y+ G + L +L+ + A+ ++ +L + +R + L A+G GY Sbjct: 423 LTLALAQYKAGLTTQLTVLNAQTSALASRQLLANLRMTRRD---RQIALAAALGGGYT 477 >gi|325275781|ref|ZP_08141653.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324099086|gb|EGB97060.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 509 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 85/429 (19%), Positives = 188/429 (43%), Gaps = 29/429 (6%) Query: 15 LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + P+ L T +I + + + +WW ++ D L++ V +A+ Sbjct: 21 LSGCIGTWGIAPQSKTLQANTLTTDAAIREAASDAHWPDQQWWHAYGDPQLDRWVALAVA 80 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 + ++ A R+ AK ++ L + A++ P + G L Sbjct: 81 GSPSLAMAAARVREAKAMAGVVESAEKLQANGQATLKRHNWPEDQFYGPGALSGANTWDN 140 Query: 123 ------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKERI 174 + +DL+G+ R+ E ++ + A+ A+L + + ++ +YI + HF +R Sbjct: 141 NAAIGLSYALDLWGRERNASEQAVDQAHMSVAEARQAQLELQNNVVRAYIQLSLHFAQR- 199 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I L ++ + L+ + G + + + EA + + +L++ + + ++ Sbjct: 200 DIVKAELAQQEQILALAKRRLAAGIGTHFEVSQAEAPLPETHRQLDSLDEEIALARNQLA 259 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G E +Q+ + L +P N+ PA L+ RPD+ ++A I + Sbjct: 260 ALAGKGPGEGAQ-LQRPALALAAPLKLPSNL--PAALVGQRPDVVASRWQVAAQARGIDV 316 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A + +P++ L GS+ P G +++ GP + LPIFD G+++S + A + Sbjct: 317 AHAGFFPNVDLVGSLGFMATGGGPLEFLTGRKFNYNVGPAISLPIFDGGRLRSQLGVASA 376 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + +TV+ A+K + + L ++ +V +K+ ++M+ +++G Sbjct: 377 GYDVAVARYNQTVVGALKNISDQLIRRESMQQQSHFAAESVAAAQKTYDIAMVAFQRGLT 436 Query: 410 SLLDILDIE 418 L++L+ + Sbjct: 437 DYLNVLNAQ 445 >gi|255066605|ref|ZP_05318460.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria sicca ATCC 29256] gi|255049189|gb|EET44653.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria sicca ATCC 29256] Length = 460 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 99/423 (23%), Positives = 187/423 (44%), Gaps = 40/423 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L+ AL+ N+ + QA +N A + NIL ADL PS S+S Sbjct: 55 WWEIYQSPQLNALMAQALENNIDLKQAAISVNKALYQANILG--ADLVPSFSGSLSASTS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQRRHIESSLANL-DSAYAQVDIA--KLNVISKLI 161 NLKT S G QL +++DL+ R+ ++ A + + + D+A +L +I+ + Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLW--RKLSATADAQVWEYQATRQDMANTRLTLINNVA 170 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + E I +A + L Y++ ++ KF G + + + S ++++ + Sbjct: 171 DAYFNIAYLNEAIELAQKSLKQYQEINRIADAKFRYGRADSSQPTQAKQSLLSAQNNLIS 230 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY--IP---INIGIPADLIRNRP 276 L+ S + LL E + P Y +P +N+ +P ++ NRP Sbjct: 231 LKNSLDTQKQVLRNLLNLKPNEAIA--------ADPAQYRLLPVKGVNLDVPITVLANRP 282 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLYLPIF 335 D+R E +L S+ + K YPS++L S++ + + + +N G + LP Sbjct: 283 DLRAAEYRLQSSLQSVEAQKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSATINLPFL 342 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K + A+++ + +++ + A+ EV + + + + L KK Sbjct: 343 NWQTMKWKDKTAQANFDSAKLDFEKALTTALNEVNTNYLAYQNAQAALNNQEQRYALDKK 402 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL------YIAIGSG 449 + + Y+ G+ L D L+ + + S A+ L + Y L Y A+ Sbjct: 403 NSRYYQVRYQHGKNELKDWLEA------LNTEYSSAQNVLNQRYETLKYENMVYKAMAGR 456 Query: 450 YNP 452 Y P Sbjct: 457 YTP 459 >gi|241758543|ref|ZP_04756660.1| TolC protein [Neisseria flavescens SK114] gi|241321286|gb|EER57446.1| TolC protein [Neisseria flavescens SK114] Length = 468 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 95/420 (22%), Positives = 188/420 (44%), Gaps = 34/420 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L++ AL N+ + QA +N A + NIL ADL PS S+ Sbjct: 63 WWEIYQSPQLNALMEQALANNVDLKQAAISVNKALYQANILG--ADLVPSFSGSLGANAS 120 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 NLKT S G QL +++DL+ + ++ + + + + +L +I+ + + Sbjct: 121 KNLKTGSHGNTFSSQLGLSYELDLWRKLSATADAQVWEYQATHEDMANTRLTLINNVADA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKSIE 216 Y + + E I +A + L Y++ +++ KF +Q +K SL+ E + S++ Sbjct: 181 YFNIAYLNEAIELAKKSLKQYQEINRIANAKFRYGRADSSQPTQAKQSLLSAENSLLSLQ 240 Query: 217 SDIPTLEKSFR--MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +++ T ++ R +N+ + PA L ++ +N+ +P ++ N Sbjct: 241 NNLDTQKQVLRNLLNLRPSENMAADPAQFRLLPVKG------------VNLDVPITVLAN 288 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLYLP 333 RPD+R E +L S + K YPS++L S++ + D + +N G + LP Sbjct: 289 RPDLRAAEYRLQASQQSVNAQKRSWYPSITLGASLSTSSDKAKSTFNIPMLGGSATINLP 348 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + +K + ++ + +++ + A+ EV + + + + +L Sbjct: 349 FLNWQTMKWKDKTVQAEMDSAKLNFEKALTTALNEVNTNYLAYKNAQASLANQEQRYQLD 408 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIAIGSGYNP 452 KK+ + Y+ G+ L D L+ + +L + +R A Y ++ Y A+ Y P Sbjct: 409 KKNSHYYQVRYQHGKNELKDWLEALNSEYSSAQNL-LNQRYEALKYENMVYKAMAGRYTP 467 >gi|254445303|ref|ZP_05058779.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] gi|198259611|gb|EDY83919.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Verrucomicrobiae bacterium DG1235] Length = 460 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 102/456 (22%), Positives = 199/456 (43%), Gaps = 31/456 (6%) Query: 11 FIVLLAGCTVGPEYTKPHM--PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 F +LLA C + P L+P + L + W +SF+ +L +L+ A Sbjct: 13 FTLLLAACDTTRQIQPPTEIDALVPDTWREEAGSTL----SRDWIDSFSSPTLTELIADA 68 Query: 69 LQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRFIP--NLKTNSTG 118 Q N L+A + A E + L SS A F P +++T S Sbjct: 69 EQNNFG-LEAAYQRTRAAEAAARISGSLRLPSLNAGLRSSRAQTMASFSPPTSIETESHA 127 Query: 119 -QLDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L + W++DL+ + + H+ S S Y + +L++ S++ ++ +A + Sbjct: 128 LSLSARWEVDLWNRLGQEHLASRSEYQASQY-DFESLRLSLASQVAKAWFNAIEAHAQYE 186 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A + ++ N+ ++++G L A+ S ++ + N+ T Sbjct: 187 LATASAESFETNLATLERRYSRGLVDAFDLRLTRAQASSSRANAVRRRSQMDTTIRNLET 246 Query: 236 LLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG YP+ L + P L G+P++L+ RPD+ Q+ +L ++A Sbjct: 247 LLGRYPSATLL------ATGELPELGNTPPAGLPSELLTRRPDVLAQQNRLIAALALEKS 300 Query: 295 AKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 AK + PSL+L +G+++ N WS + +F G++K+ + ++ Sbjct: 301 AKRNWLPSLALTASDGTLSPDFSNLLEKDFNVWSLAGDVSAALFQSGRLKAQRDQLNANQ 360 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q +++ VL A +EVE AL S + + T+ Q A + ++ + + Y +G + Sbjct: 361 LSQLAQYKDLVLRAFREVETALRSETDLSDLETQTQIAADENRSAEEQAWRLYERGLVDI 420 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +LD ER + + L + Q ++ ++L++A+G Sbjct: 421 TTVLDAERRSFEARSQLISIRNQRLQNRINLHVALG 456 >gi|152979834|ref|YP_001352756.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] gi|151279911|gb|ABR88321.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] Length = 471 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 96/456 (21%), Positives = 210/456 (46%), Gaps = 36/456 (7%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 C + TKP++ + + ++ + D WW F L+ L+ AL N + Sbjct: 25 CAGRIDATKPNLEMPASWTEASSATAELQRD---WWRGFGSDELSGLIDQALANNPDLNI 81 Query: 78 ATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTG---------QLDSDW 124 A ER+ A+ A LFP S+ + P +TG L + Sbjct: 82 AAERVTQAEITARLAGASLFPLLTVSANTGVGSS-KPGQTATATGWTRNESSGVALAVAY 140 Query: 125 KIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++D++G+ + S A+L+++ ++ +L + + + +Y + R+ +A + L + Sbjct: 141 EVDVWGRVAAVASGANASLNASRYDMETVRLTLTTGVANAYFQTLALRVRLKVAQENLAI 200 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 +K + ++ G+ S L + + + + + + L+ R V ++ LLG Sbjct: 201 AEKVYSIVEARYRFGSASALDMSRQRGAVLAQRNILLPLQVQERQTVSALAILLGRQP-- 258 Query: 244 FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 +Q + + L +P ++ G+P+ LI RPD+ E +L + A + A++ L P+ Sbjct: 259 --QALQVAAQDLNV-LTVPEVSPGLPSTLITRRPDLASVEAQLFAADANVAAARAALLPT 315 Query: 303 LSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +SL G+ + N +S G +FD +++ + +ES ++ +++ Sbjct: 316 ISLTGAAGNSSAALLALGNPAYSVGLTASFVQTLFDGNRLRLQVETSESVRRQLVESYRR 375 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELH---KKSMSLSMINYRQGRYSLLDILDI 417 TV ++KEV++AL++ + + + + Q +E+ ++++ LS + YR+G L +LD Sbjct: 376 TVYASLKEVDDALSNASRN---LAQEQAQIEIRNEARRALQLSELRYREGADDLNTLLDA 432 Query: 418 ERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 +R D +A+++L + D++ ++G G++ Sbjct: 433 QRTL--FAADDQVAQQRLLRLTGTTDVFKSLGGGWS 466 >gi|332881816|ref|ZP_08449462.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680243|gb|EGJ53194.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 466 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 112/491 (22%), Positives = 217/491 (44%), Gaps = 73/491 (14%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKW 52 I ++I + I L V P+ + +MP G S+ L D T+ W Sbjct: 5 IYKSIAAASIALTLSACVAPK-RQEYMPE-------GISEKLFRTDNIPTDSLSSATVSW 56 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENI----------LSVRADLFPSS-- 100 F D L + + AL NL + A + + +A+ + LSV AD S+ Sbjct: 57 RNIFTDPLLQQHISKALTNNLDVRIAIQSVQSAQAYLKQSKAAYIPTLSVGADYTRSTNS 116 Query: 101 ---YASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIA 152 I R NL + + W+ D++G+ R I S LA +++ A Sbjct: 117 INAAGGIGDRTYGNLWDITA---SASWEADIWGKISAQKRAQIASYLATVEAQKA----V 169 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS-HLKFTQGATSKLSLVKLEAE 211 + V++ L +Y E+ + Q +D +K++E + HLK G+T++++ ++EA Sbjct: 170 QSEVVATLATAYYQLLMLDEQKKVLEQTIDFRQKSLETTKHLK-DAGSTTEVATKQIEAL 228 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ + ++ S + I L+G E LH +++ SN G P L Sbjct: 229 VYNAQAQLISINNSIWAVENTICVLMG----EELHSIER-SNLSAQQFPTEFKQGYPVKL 283 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 + NRPD+ L ++ A+++ +P+L+L+ L+ D F + +F Sbjct: 284 LENRPDVLRAVLNLRNAFELTNAARANFFPTLTLSARGGLSSTELDTWFSAKSMFANFVA 343 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV---TK 385 L PI +K +I++ ++ + + ++++L+A KEV +A+ + +++ TK Sbjct: 344 GLAQPILNKRQIRTQYEVQRAAQETALLNLKKSILSAGKEVTDAMRNFTTQTELIELKTK 403 Query: 386 ----LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY-- 439 Q A + K+ M+NY L+++ E +++ +LS+A+ Q + Sbjct: 404 EMKAYQEATDFSKQLFDSGMVNY-------LEVITAE--VSRLNAELSVAEAQFTRMQYG 454 Query: 440 VDLYIAIGSGY 450 + LY A+G G+ Sbjct: 455 ITLYKALGGGW 465 >gi|29347375|ref|NP_810878.1| multidrug efflux pump channel protein [Bacteroides thetaiotaomicron VPI-5482] gi|29339275|gb|AAO77072.1| multidrug efflux pump channel protein [Bacteroides thetaiotaomicron VPI-5482] Length = 456 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 107/464 (23%), Positives = 201/464 (43%), Gaps = 37/464 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 I S ++L+ C + +Y KP +P S + N L W E F D+ L L Sbjct: 7 ILSAATLVLSSCGIYNKY-KPVSEVPEGLYGSETVASADTANFGNLSWREVFTDSYLQNL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNSTGQL 120 + AL +N + A R+ A+ ++L+ + PS + ++S + + Sbjct: 66 IDSALVRNTDMQTAHLRVKEAEASLLTSKLSYLPSLFLAPEGAVSSFDRGKATQTYSLPV 125 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKERISI 176 + W++D+FG+ + ++ +AY Q K ++S + +Y + I Sbjct: 126 TASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVSAVANTYYTLLMLDAQYEI 182 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + +K+++ + G ++ L + EA +I + + L++ ++++ L Sbjct: 183 SVSTEAAWKESVRTARAMKKAGMMTEAGLAQTEATYYNICTTVLDLKEQINQTENSMALL 242 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L E H MQ+ Q L ++GIP ++ NRPD+R E LA + A+ Sbjct: 243 LA----ETPHKMQRGKLENQ-QLPEDFSVGIPLQMLSNRPDVRSAEFSLAQAFYTTNAAR 297 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YPS++L+GS T+ PG S L P+F+KG + ++ A++ + Sbjct: 298 AAFYPSITLSGSAGWTNSAGSMIINPGKFVA-SAVASLTQPLFNKGVNIAQLKIAKAQQE 356 Query: 353 EQYITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLSMINYR 405 E +++++T+LNA EV AL + K +T LQ A +S SL M + Sbjct: 357 EARLSFEQTLLNAGVEVNEALVQYQTAREKSAFYDKQITSLQTAA----RSTSLLMEHSN 412 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y L++L ++ + + + + LY A+G G Sbjct: 413 NTTY--LEVLTAQQTLLNARLSQVANRFTEIQGVITLYQALGGG 454 >gi|254883452|ref|ZP_05256162.1| outer membrane protein [Bacteroides sp. 4_3_47FAA] gi|254836245|gb|EET16554.1| outer membrane protein [Bacteroides sp. 4_3_47FAA] Length = 485 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 108/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I ++ W F DT L + Sbjct: 16 IIGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSMSWKTFFPDTLLQSYIA 73 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N + LQ ERI+ A+ + + L P I RF Sbjct: 74 EALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 133 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ D++G+ S+++ + + +A+ +IS+ Sbjct: 134 PDLEKDKHIPDPYRNFNLGLNFQWEADIWGKLTDKKRSAVSRWMQSVEAMRLARTLLISE 193 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 194 VGTHYFELIGLDKQRYVLREAILTARDAYNLTDEL----MKEGEVTRLSVDQFRSRRLKL 249 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 250 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 305 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 306 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 365 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + ETVL A +EV N +T+ ++ + + Sbjct: 366 APIFKQNTIRALWNDAKSQQRIALLGYHETVLKAYEEVLNLITASSQMHQRKKLKEEESR 425 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 426 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 485 >gi|66045208|ref|YP_235049.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63255915|gb|AAY37011.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 462 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 98/462 (21%), Positives = 205/462 (44%), Gaps = 36/462 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL+ C T P P P ++ + D ++WW+ F L++L++ A + Sbjct: 11 CLLLSACQTPAPPPDSGIQP--PASWAFAENAAAQRSD-VRWWQQFGSPQLDRLIEQASR 67 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLK-----------TNS 116 + + A R+ A+ + + A L P +RF+ N N Sbjct: 68 DSHEVAAAMARVRQAQASAIIGGAPLLPELAFDLRGERNRFLRNSDRKANPSDDNNTNNF 127 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T L + +++D +G +S+L L ++ +L +++ + Y +E+ Sbjct: 128 TSDLTASYEVDFWGGIAAGRDSALQGLRASQFDQATVELTLLANVADRYAQTLAAREQGR 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA L + + L ++ G+ + L L + + + + + ++P +++ + ++ Sbjct: 188 IAELNLANAQDVLRLVQTRYESGSATALELAQQKNLVATQQRELPRVQQLANEQLITLAA 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P + LH + + + I G+P++L+ RPD+ E LA + A + +A Sbjct: 248 LLGQP-VQNLHLADQPFDTLN---WPDIGAGVPSELLTRRPDLAKAEADLAAAQANVTVA 303 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++ + P L+L+ + + + + S L PIF+ G++ + +A +E Sbjct: 304 RAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATGRQEEL 363 Query: 355 YITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSL 411 T++ ++N+ +VE AL SI D++ + H EL + + ++ Y++G L Sbjct: 364 LETYRGAIINSFADVEKALNSIGGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAEDL 420 Query: 412 LDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +L+ +R V V L +A+ Q + + LY A+G + Sbjct: 421 LTVLETQRTLYLAQDVSVQLRLARLQ---ASIALYKALGGSW 459 >gi|91200613|emb|CAJ73663.1| similar to outer-membrane efflux protein [Candidatus Kuenenia stuttgartiensis] Length = 479 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 96/446 (21%), Positives = 196/446 (43%), Gaps = 40/446 (8%) Query: 37 SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL 96 S N ++ +N + W + F DTSL L+ ALQ N + + I A+ + + + + Sbjct: 38 SYNNVQDTVNTAEVSWMKFFTDTSLIALIDTALQNNQELNITLQEIIIAENEVQARKGEY 97 Query: 97 FP------SSYASISHRFIPNLKTNSTGQLDS-----------------DWKIDLFGQRR 133 P + A F N + S W++D++ + R Sbjct: 98 LPFVNLKMGAGAEKVGEFTRNGAVEENLDIKSGKEFPEPLPDYLISANVSWEVDIWKKLR 157 Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQILDLYKKNIE 189 + + + A Y K +++KLI SY + + + + +++ K ++ Sbjct: 158 NAKKAAA---LRYLSTIEGKNFIVTKLIAEISSSYYELMALDNMLEVVKKYIEIQKNALK 214 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ ++L++ K EAE+ +S +E+ + I+ L+G F +Q Sbjct: 215 TVKLQKEAAKATELAVRKFEAEVLKNQSYQYNIEQKITETENRINFLVG----RFPQPVQ 270 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 + S + + I+ G+P+ L+ NRPDI+ E +LA + + +A++ YPSL + + Sbjct: 271 RNSQGYNDLVPDTIHAGLPSQLLTNRPDIKQAELELAAAKLDVKVARARFYPSLDIVAGV 330 Query: 310 A-----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 L + P + ++ +L +P+ ++ IK+ A + + ++ TVLN Sbjct: 331 GYQAFDLKYLIRTPE-SILYNLAGELAVPLINRNAIKATYNNANAKQIQAVYNYERTVLN 389 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 A EV N L+ I+ K V+ +S++++ ++ R L++L +R + Sbjct: 390 AYIEVVNKLSKISNLGKNYDLKAKQVQALTQSITIADNLFKSARADYLEVLMTQRDALEA 449 Query: 425 EVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++L K Q + V++Y A+G G+ Sbjct: 450 KMELIETKVQQMNAMVNIYQALGGGW 475 >gi|149369872|ref|ZP_01889723.1| putative outer membrane lipoprotein [unidentified eubacterium SCB49] gi|149356363|gb|EDM44919.1| putative outer membrane lipoprotein [unidentified eubacterium SCB49] Length = 471 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 105/467 (22%), Positives = 202/467 (43%), Gaps = 23/467 (4%) Query: 2 NILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDT 59 N + I L + V L C V +Y +P + T + N + ++I + W E F D Sbjct: 9 NFGKVILLLVVAVTLQSCFVAKDYVRPEIEETETLYRTENLQSDSLSIAEVSWKELFTDQ 68 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIPNLKTNS 116 L + ++ L+ N+ + A +++ AA+ +A P+ F N + S Sbjct: 69 KLQQYIEEGLENNMDVRIAIQQMIAAEAYAKQGKAGYLPTVSVGPNYTRQEFSENSQFGS 128 Query: 117 --TGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +G LD+ W+ D++G+ R + ++ A+ + A K +I+ + +Y Sbjct: 129 IFSGGLDTYDVTANLSWEADIWGKIRSNKRATQASYLQSVAGHQAVKTQLIASITNTYYS 188 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ +A + + + ++E G +++++ + A+ + ++ +E + Sbjct: 189 LLALDAQLEVAKETIATRESSVETIKALKDAGQVTQVAVDQDIAQYNNAKALQVDIELAI 248 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + + LLG A E F L +G+PA L+ NRPD+ E L Sbjct: 249 FKAENTLGILLG-RAGEHFERTSLDDQKFDQEL----KLGVPASLLSNRPDVMAAEYGLI 303 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S +AKS+LYPSL L S D + + L P+ + +K+ Sbjct: 304 KSFELTNVAKSNLYPSLKLTASGGFQSVELDKLLNANSLFATIVGGLTQPLLNNRSLKTQ 363 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 A + ++ + +++T+L A EV NAL S + K ++ VE + + + S Sbjct: 364 REVAIAQQEQSLLAFKKTLLVAGNEVSNALFSYESETKKFEFRKNEVEALRIAEANSEEL 423 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + G + LD+L ++ E+++ +K Q S VDLY A+G G+ Sbjct: 424 LKNGYANYLDLLTARQSALSAELNIIDSKLQQLVSVVDLYEALGGGW 470 >gi|294146757|ref|YP_003559423.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292677174|dbj|BAI98691.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 458 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 99/452 (21%), Positives = 193/452 (42%), Gaps = 30/452 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 GC + P Y +P P+ P G + L W D L ++ AL N Sbjct: 16 GCNMAPTYVRPAPPV-PASLPSGPAYAPATATEKPGLPWTALIGDAGLKTVIGRALDNNR 74 Query: 74 TILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSDWKIDLF 129 + A + AA+ RA+ P+ + A + R + S S ++IDLF Sbjct: 75 DLRAALANVEAARALYRVQRAERLPAVTGEAAAGFTRRNDARQNSYSADIGFSAFEIDLF 134 Query: 130 GQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 G+ R +ES LA + A A ++ +I++ +Y ++ + ++ + L Sbjct: 135 GRVKNLTRSALESYLATEEGARAT----RIALIAETATAYATLAADQDYLDLSRRTLANA 190 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ + L+ G KL + + E ++ SDI + + + L+G P + Sbjct: 191 ERTLALTRSLNGAGLIGKLDVHQAETTVEQARSDIAANLTQVAQDRNALDLLVGAPVEDA 250 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 L + + P++ + G+ +D++ RPD+ E +L + A IG A++ ++P +S Sbjct: 251 L--LPRSLQELTPDV-AKVPAGLSSDVLLQRPDVLQAEHQLKAANADIGAARAAMFPRIS 307 Query: 305 LNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 L +I + + F G WS P +PIF G + N+ +++ +++ Sbjct: 308 LTAAIGVASSALSSLFTGDGFAWSAAPSASMPIF-GGAARGNLSYSKAQRDLSLARYEKA 366 Query: 362 VLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + A +EV +AL +I+E + +L V ++S L+ YR G + L+ L + Sbjct: 367 IQTAFQEVSDALAREGTIDEQQAAQQRL---VLASQRSYKLAEERYRAGIDTFLNSLTSQ 423 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 R+ + + ++ + LY IG+ + Sbjct: 424 RSLYNAQQSAIATNLAMIRNRILLYRVIGADF 455 >gi|323697509|ref|ZP_08109421.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio sp. ND132] gi|323457441|gb|EGB13306.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio desulfuricans ND132] Length = 461 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 186/405 (45%), Gaps = 13/405 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W F D +L +LV +AL++N + A ++ A+ D+ P+ AS+ + Sbjct: 50 WPTDFGDPALTRLVALALERNNDLAAAAIKVRKAQYQAGLAWEDMTPNLSASLGTDSEKS 109 Query: 112 LK-----TNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSY 164 LK T+ + + W+ DL+G+ S A ++ + D L+++ + Y Sbjct: 110 LKRGGWDTDYSAKFGISWEADLWGRLSSARDS-AEWEALATEQDRQGTALSLVGTTMKLY 168 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + R+ ++ ++ ++ + L+ + GA S L + + ++ S+ + TL + Sbjct: 169 WGIAYDNVRLQLSESNIESSRQTLALTESQERWGAASSLEVNQSRQDLASLLATNQTLRQ 228 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + +++ ++ L P + + + S P PI G+PA L+ RPD+R E + Sbjct: 229 ARQEDINALAVLFDMPPGKTMADPETLSMAALP----PIPAGLPAQLLGRRPDLRAAELR 284 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 L + +A AK+D YP L+L GS+ + + + S N + L P + ++ Sbjct: 285 LREYLADTDAAKADFYPPLTLTGSLGSASTELSDLLNNPVAALVSSLTFPFLNWNTLQLQ 344 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ +++ E + +++T+ A+KEVE+AL++ + + L + ++ + + Sbjct: 345 LKVSQADFDEAVVNFRQTLYEAMKEVEDALSNRDRLAERANHLAENLTAAREVERIYEVR 404 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 Y+ G +L D LD + E + +YV LY A+G Sbjct: 405 YKAGSGTLKDWLDAQDTRRIAEQSAAENLYSRLTNYVTLYQALGG 449 >gi|186476026|ref|YP_001857496.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gi|184192485|gb|ACC70450.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 497 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 95/412 (23%), Positives = 178/412 (43%), Gaps = 51/412 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP-------------LLPTQ-----FSIGNSKNLINI 47 A SLF C GP P MP +P Q F +G N + Sbjct: 14 AAASLFAT---ACAFGPSGNPPAMPEPAHYGAEEQSTQTVPAQGITQQFVVG--ANAVP- 67 Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS-----SY 101 +WW +F LN LV L+ + T+ A + AA+E + + + +++ P+ Sbjct: 68 ---QWWRTFESNELNALVDEGLRNSPTLAAADRNLTAAREQLRAQIGSNMLPAIDAGGQA 124 Query: 102 ASISHRFIPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKL 154 A IP N+ GQL + + D+FG R ++LA+ + A Q + A+ Sbjct: 125 ARQRALGIPEAGPNTFLYNTFVGQLQAQYTFDIFGAARLANAALASRVNVQAFQFNAARR 184 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + ++ + + A ++ +++ L + + ++ GA S L+ + S Sbjct: 185 ALAANIVTAAVSAAMLDAQVKTTERLVTLADEQARDTQRRYDLGAVSHSDLLNAQQSAAS 244 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLI 272 + + +P + H ++ LLG + S L++P + + +P+DL+ Sbjct: 245 LAASLPAARQQLLTTRHALAVLLGSTPDAAPPPLDLAS------LHVPERVPVSVPSDLL 298 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPK 329 + RPDI + L + A +G+A + +YPS++LN S+ + + G WS G Sbjct: 299 KARPDIEAADATLKAAAADVGVATAQMYPSITLNASMGQGGFSWPVALSGAGALWSIGAS 358 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + PIF G + + R A +S + +++TVL A + V + L ++ D + Sbjct: 359 ITQPIFHGGALFAQRRAALASYEAATSQYKQTVLTAFQNVADTLAALEHDAQ 410 >gi|298369955|ref|ZP_06981271.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Neisseria sp. oral taxon 014 str. F0314] gi|298281415|gb|EFI22904.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Neisseria sp. oral taxon 014 str. F0314] Length = 460 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 93/388 (23%), Positives = 173/388 (44%), Gaps = 42/388 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L+ AL+ N+ + QA +N A + NIL ADL PS S+S Sbjct: 55 WWEIYQSRQLNALMAQALENNIDLKQAAISVNKALYQANILG--ADLVPSFSGSLSASTS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQRRHIESSLANLDSAYAQV--------DIA--KL 154 NLKT S G QL +++DL+ R + + +A AQV D+A +L Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLW---RKLSA------TADAQVWEYQATRQDMANTRL 163 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +I+ + +Y + + E I +A + L Y++ ++ KF G + + + S Sbjct: 164 TLINNVADAYFNIAYLNEAIELAQKSLKQYQEIDRIADAKFRYGRADSSQPTQAKQSLLS 223 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY--IP---INIGIPA 269 ++++ +L+ S + LL E + P Y +P +N+ +P Sbjct: 224 AQNNLISLKNSLDTQKQVLRNLLNLKPNEAIA--------ADPAQYRLLPVKGVNLDVPI 275 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-P 328 ++ NRPD+R E +L S+ + K YPS++L S++ + + + +N G Sbjct: 276 TVLANRPDLRAAEYRLQSSLQSVKAQKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSA 335 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LP + +K + A+++ + +++ + A+ EV + + + + Sbjct: 336 TINLPFLNWQTMKWKDKTAQANFDSAKLNFEKALTTALNEVNTNYLAYQNAQAALNNQEQ 395 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILD 416 L KK+ + Y+ G+ L D L+ Sbjct: 396 RYALDKKNSRYYQVRYQHGKNELKDWLE 423 >gi|319639184|ref|ZP_07993935.1| TolC protein [Neisseria mucosa C102] gi|317399368|gb|EFV80038.1| TolC protein [Neisseria mucosa C102] Length = 460 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 50/428 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L++ AL N+ + QA +N A + NIL ADL PS S+ Sbjct: 55 WWEIYQSQQLNALMEQALANNIDLKQAAISVNKALYQANILG--ADLVPSFSGSLGANAS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 NLKT S G QL +++DL+ + ++ + + + + +L +I+ + + Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLWRKLSATADAQVWEYQATHEDMANTRLTLINNVADA 172 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKSIE 216 Y + + E I +A + L Y++ +++ KF +Q +K SL+ E + S++ Sbjct: 173 YFNIAYLNEAIELAQKSLKQYQEINRIANAKFRYGRADSSQPTQAKQSLLNAENSLLSLQ 232 Query: 217 SDIPTLEKSFR--MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADL 271 +++ T ++ R +N+ + PA L +P +N+ +P + Sbjct: 233 NNLDTQKQVLRNLLNLRPSENMAADPAQFRL---------------LPVKGVNLDVPITV 277 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKL 330 + NRPD+R E +L S + K YPS++L S++ + D + +N G + Sbjct: 278 LANRPDLRAAEYRLQASQQSVNAQKRSWYPSITLGASLSTSSDKAKNTFNIPMLGGSATI 337 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP + +K + ++ + +++ + A+ EV + + + + Sbjct: 338 NLPFLNWQTMKWKDKTVQAEMDSAKLNFEKALTTALNEVNTNYLAYKNAQAGLANQEQRY 397 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL------YI 444 +L KK+ + Y+ G+ + D L+ + + S A+ L + Y L Y Sbjct: 398 QLDKKNSHYYQVRYQHGKNEMKDWLEA------LNTEYSSAQNLLNQRYEALKYENMVYK 451 Query: 445 AIGSGYNP 452 A+ Y P Sbjct: 452 AMAGRYTP 459 >gi|288929946|ref|ZP_06423788.1| multidrug resistance protein, FusA/NodT family [Prevotella sp. oral taxon 317 str. F0108] gi|288328765|gb|EFC67354.1| multidrug resistance protein, FusA/NodT family [Prevotella sp. oral taxon 317 str. F0108] Length = 461 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 109/425 (25%), Positives = 179/425 (42%), Gaps = 47/425 (11%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L W F D L + AL+ N +L A + A+ + S + PS +A I Sbjct: 58 LPWRSVFTDPQLQSHIATALENNYDLLNAALNVKMAEAQLKSAQLSFLPS-FAFTPQGTI 116 Query: 110 PN------LKTNSTGQLDSDWKIDLFGQ----RRHIESSLANL-DSAYAQVDIAKLNVIS 158 + +KT S + + W IDLFG +R + +L + D A A+ +IS Sbjct: 117 SSWDGHAAVKTYSL-PVSASWTIDLFGTLLSAKRSSQMALIGMKDYQLA----ARTRLIS 171 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y + + + ++ L K E L+ G + E+ S+++ Sbjct: 172 NVANLYYTLLMLDKELELIDEMEVLAKDTWETMKLQKEYGNVRSTGVQSAESNYYSVQAQ 231 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLH-YMQKQSNNFQPNLYIPINI--GIPADLIRNR 275 L++ R + +S LLG A QS +P N GI ++ NR Sbjct: 232 KVGLKRQLREAENALSLLLGQSARTIARGKFDGQS--------LPTNFSTGISLQMLNNR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYL 332 PD+ E LA + A+S YP+L+L+ T+ N S L Sbjct: 284 PDVHAAEMSLAQCFYNVQTARSRFYPTLTLSAQGGYTNSGGMGITNPAKLLLSAVGSLTQ 343 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--------EDKKIVT 384 PIF +G++ + ++ A+ + Y TWQ+ VL+A EV NAL N E K+IVT Sbjct: 344 PIFQRGQLIAGLKVAKIQYERAYNTWQQMVLSAGNEVSNALVLYNASAEKSDIEAKQIVT 403 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L+ VE K ++ + R S L+++ ++ KVE+ ++ V+LY+ Sbjct: 404 -LRQNVEDTKMLLT-------ESRGSYLEVITAQQTLLKVELSKVQDDFYKMQAVVNLYM 455 Query: 445 AIGSG 449 A+G G Sbjct: 456 ALGGG 460 >gi|152979010|ref|YP_001344639.1| RND efflux system outer membrane lipoprotein [Actinobacillus succinogenes 130Z] gi|150840733|gb|ABR74704.1| RND efflux system, outer membrane lipoprotein, NodT family [Actinobacillus succinogenes 130Z] Length = 457 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 188/420 (44%), Gaps = 33/420 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WW +ND LN++V+ AL N + +A +N+A + N+L ADL PS S S Sbjct: 50 WWSLYNDAQLNRVVEQALLNNKDLAKAAISVNSALYQANLLG--ADLVPSFSGSTSSSAS 107 Query: 110 PNLKT--NST----GQLDSDWKIDLFGQRRHIESSLA---NLDSAYAQVDIAKLNVISKL 160 T NST G L+ + +DL+ RR ++ A N + ++ +L++I+ + Sbjct: 108 RRTDTGANSTISHGGSLNVSYTLDLW--RRLANAADAGEWNYKATQQDLEATRLSLINAV 165 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y + + IS + +D Y + + + QG + S + + + + +++ Sbjct: 166 VVTYYQIAYLNDAISATNDSIDYYSRINSIMQNRLNQGVEDRASTDQAQQSVLTARNNLI 225 Query: 221 TLEKSFRMNVHNISTLLGYPAT-----EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + + + LL F H + ++ P+N+ +P I NR Sbjct: 226 SYQTQRKTAEQTLRNLLNLKPDAPLNINFPHILNVKT--------TPVNLNVPVSTIANR 277 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYL 332 PD+R +L+ + + +P++SL GS++ +++ N+F + G + L Sbjct: 278 PDVRGNLFRLSSAFKDAKAMQKAWFPTISLGGSMSSSNNKVSNAFENPTAAGTLG--ISL 335 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P D +K N++ +E++ + + +++ + A+ EV+ + N+ + + LQ + Sbjct: 336 PFLDWNHVKWNVKISEAAYETARVNYEQGITTALNEVDTNYFAYNQAVQNFSNLQRKYDY 395 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 K+ Y G L + L+ +V + AK + ++ +Y ++G Y+P Sbjct: 396 DKRITQYYQNRYNAGVSELREWLNAANTEKTSQVSILNAKYSVIQNENAIYSSMGGYYSP 455 >gi|257461380|ref|ZP_05626476.1| outer membrane efflux protein [Campylobacter gracilis RM3268] gi|257441103|gb|EEV16250.1| outer membrane efflux protein [Campylobacter gracilis RM3268] Length = 452 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 95/427 (22%), Positives = 199/427 (46%), Gaps = 31/427 (7%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLKWWESFNDTSL 61 IL + ++FI GC + + P + F N+ IDTL W++ + ++ L Sbjct: 7 ILSGVLAVFI---GGCAS----NQSEVEFKPVEHFKDENAS--YEIDTL-WYKKYGESYL 56 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNL----KT 114 NKLV AL N + A + +A N+ RADLFP SS+++ ++R I KT Sbjct: 57 NKLVDQALANNYDLKTAALNVESAYANLGLSRADLFPTLSSSWSAGANRDISTGSNWNKT 116 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 S+G + +++DLFG+ R + + N ++ ++ +L +I+ ++ Y + + + Sbjct: 117 YSSG-FNVSYELDLFGKIRSAVNAEGWNAKASEFDLENTRLTLINSVVSGYFEMLYLNDS 175 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + Q L Y++ ++ K+ G + +L +++ I +E+ + +++K+ N + Sbjct: 176 LKWTKQNLSDYREIEKIIKAKYDYGKSEQLDYRQIQNSILGLENKVLSIQKNIEDNHKYM 235 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+ + +F +++ + +++ +P + NRPDIR +L S Sbjct: 236 RNLIS-SSLQF----DDNTDSINSIEFQGVDLNVPYTALANRPDIRAAIARLNSSFYDEQ 290 Query: 294 IAKSDLYPSLSLNGSI----ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 AK + +PS++L + ++ ++SF S + LP D ++++ ++ +E Sbjct: 291 TAKLNFFPSVNLGAGLTNGQGVSANDSFKL--NFLSGNVSISLPFLDYARVENRLKISEI 348 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + ++ + +++T+ NA EV N + + L A + + L Y G Sbjct: 349 AFRKNVVNYEQTLSNATNEVLNLYRIYQINLASLKNLSAAYDEKARIADLYAAKYEAGSS 408 Query: 410 SLLDILD 416 L D+L+ Sbjct: 409 ELKDMLE 415 >gi|120612958|ref|YP_972636.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1] gi|120591422|gb|ABM34862.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1] Length = 515 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 101/447 (22%), Positives = 200/447 (44%), Gaps = 19/447 (4%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQQNLTI 75 GC+ P+ +P P LP ++ + + WW++F+D +L+ LV ALQ+NL + Sbjct: 57 GCSA-PDIRRPEAPALPATWTSPVPEGAAAAPEFRAWWKAFHDPALDALVDEALQKNLDL 115 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST---GQLDSDWKIDLFGQR 132 A R+ A+ PS A R + +++ + +D W++ LFG Sbjct: 116 AIAAHRLREARLQAGRAAVQFRPSFGAGA--RTLQDIEAADSYFHASIDMVWELGLFGAA 173 Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIP-SYIDARHFKERISIAHQILDLYKKNIELS 191 +S A A + + +Y+D + + ++ + + L ++ L+ Sbjct: 174 GSARASAAADRDAAVADRQGARVAVVAEVVRNYLDLQAARRQLQLLDRQAALDERAARLA 233 Query: 192 HLKFTQ--GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 ++ GAT +++ ++ P E++ +++ LL A + Y Sbjct: 234 EVRRRTWTGATDEVASAGVQRARTRAARAEP--EQARARAAQSLAVLLDRVAPDPAWYAD 291 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 + P L +PADL+R RPD++ E + + A++G+A+S+LYP +++ GS+ Sbjct: 292 GPARV--PALAPFAFPALPADLLRTRPDVQAAEAAVRKAAAEVGVARSELYPRIAITGSL 349 Query: 310 A----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 LT + N + GP + +P+ D G+ + + + + Q +++Q TV +A Sbjct: 350 LYAYNLTRNRRTTSDNVP-AIGPTIDIPLLDWGRRRMQVDAQQEALQAAELSYQRTVRSA 408 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 + E E AL+++ + L A + + + + R G S D L +RA + E Sbjct: 409 VAEAEGALSALAAQQNRADALAQARPALAERVRAADVQARLGLASEYDGLAAQRAALQAE 468 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + A+ + ++V LY A+G P Sbjct: 469 AEWATAQDARSLAFVALYKALGGAPLP 495 >gi|330968017|gb|EGH68277.1| outer membrane efflux protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 462 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 93/421 (22%), Positives = 188/421 (44%), Gaps = 32/421 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSPELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S++ L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSAVQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + ++L +F G+ + L L + + + + Sbjct: 168 LLSNVADRYAQTLAVREQGRIAGLNLANAQSVLKLVQTRFDSGSATALELAQQKNLVATQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + + F + I G+P+DL+ R Sbjct: 228 QRELPRIQQLANEQLITLAALLGQP----VQSLTLSDQAFDTLNWPDIGAGVPSDLLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +LA + A + +A++ + P L+L+ + + + S L PI Sbjct: 284 PDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + RA + +E T++ ++N+ +VE AL SI+ D++ + H EL Sbjct: 344 FNNGRLGAERDRALARQEELLETYRGAIINSFADVEKALNSISGLDQQ---RYWHEEELK 400 Query: 394 KKSMSLSMIN--YRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + Y G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 401 QAQIAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARVQ---ASIALYKALGG 457 Query: 449 G 449 G Sbjct: 458 G 458 >gi|209520733|ref|ZP_03269481.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209498822|gb|EDZ98929.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 523 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 104/432 (24%), Positives = 198/432 (45%), Gaps = 37/432 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMP--------LLPTQF--SIGNSKNLINI--DTLKWW 53 +I SL VL A C+ GP P MP LPTQ + G ++ ++ +WW Sbjct: 23 SIASLTCVLTA-CSFGPNGEPPAMPQPAHYGAEALPTQTVPAQGVTQQFVSGAQPVPEWW 81 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF- 108 + + +LN LV L+ + T+ + AA+E + + + + L P+ A + +R Sbjct: 82 KLYRSDALNALVDEGLRNSPTLAATDRSLAAAREQLRAQIGSSLLPTIDAGGQATRNRAL 141 Query: 109 -IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVISKL 160 IP N+ GQL + + DLFG R ++LA ++ Q+D A+ + + + Sbjct: 142 AIPEAGPNTFLYNVFVGQLQAHYTFDLFGATRLANAALAARVNVQVYQLDAARRALAANI 201 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + + + +I +++ L + +F GA S ++ + S+ + +P Sbjct: 202 VTATLTSSALHAQIDTTERLVILANDQARDTERRFELGAVSHADMLNAQQNAASVAASLP 261 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L++ + H ++ LLG P T + Q ++ + + +P++L+R+RPDI Sbjct: 262 ALKQQWLTTRHALAVLLGRTPDT-----APDDIDLAQLHVPEQVPVVVPSELLRSRPDIE 316 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYLPIF 335 + L + A +G+A + ++P+LSL+ S+ S+P G WS G L P+F Sbjct: 317 AADAALKAAAADVGVATAQMFPTLSLSASMG-QGGFSWPVAVSGAGAIWSIGASLSQPLF 375 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G + + R A+ + + +++TVL A + V + L S+ D + + A + Sbjct: 376 HGGALLAQRRAAQQTYEASVSQYKQTVLAAFQNVADTLASLEHDAQSLDAANVAARSAQG 435 Query: 396 SMSLSMINYRQG 407 + + YR G Sbjct: 436 VFNDTSARYRLG 447 >gi|167719658|ref|ZP_02402894.1| hypothetical protein BpseD_11602 [Burkholderia pseudomallei DM98] Length = 249 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPG 319 ++ G+ +DL+ RPDIR E++L + A IG A++ +P ++L GS++ F Sbjct: 48 VSPGLSSDLLEQRPDIRQAEQRLVAANANIGAARAAFFPRIALTTDVGSVSDAFSGLFSA 107 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 ++ W+F P+L LPIF G+ ++N+ A++ +++T+ A +EV +AL + ++ Sbjct: 108 GSSVWTFAPRLTLPIFAGGRNRANLDVADARKHIAVAEYEKTIQTAFREVADALAARDQI 167 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + Q + + L+ Y G S L++LD +R+T + +L K+ + Sbjct: 168 DAQLAAQQAVYGADAERLRLAQRRYDSGVASYLELLDAQRSTFESGQELIRLKQLRLTNA 227 Query: 440 VDLYIAIGSGYN 451 + LY A+G G++ Sbjct: 228 ITLYRALGGGWS 239 >gi|319641761|ref|ZP_07996442.1| outer membrane protein [Bacteroides sp. 3_1_40A] gi|317386595|gb|EFV67493.1| outer membrane protein [Bacteroides sp. 3_1_40A] Length = 481 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 108/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I ++ W F DT L + Sbjct: 12 IIGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSMSWKTFFPDTLLQSYIA 69 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N + LQ ERI+ A+ + + L P I RF Sbjct: 70 EALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 129 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ D++G+ S+++ + + +A+ +IS+ Sbjct: 130 PDLEKDKHIPDPYRNFNLGLNFQWEADIWGKLTDKKRSAVSRWMQSVEAMRLARTLLISE 189 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 190 VGTHYFELIGLDKQRYVLREAILTARDAYNLTDEL----MKEGEVTRLSVDQFRSRRLKL 245 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 246 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 301 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 302 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 361 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + ETVL A +EV N +T+ ++ + + Sbjct: 362 APIFKQNTIRALWNDAKSQQRIALLGYHETVLKAYEEVLNLITASSQMHQRKKLKEEESR 421 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 422 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 481 >gi|320665698|gb|EFX32735.1| putative outer membrane efflux protein MdtP [Escherichia coli O157:H7 str. LSU-61] Length = 488 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 89/473 (18%), Positives = 205/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPFAMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++ +++ A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVTAAIGAHNASLAETAAVELSLTTGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L D F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAE 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + E+ L + + + L ++GSGY Sbjct: 431 AA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGSGYQ 480 >gi|149175880|ref|ZP_01854498.1| probable outer membrane lipoprotein IbeB [Planctomyces maris DSM 8797] gi|148845327|gb|EDL59672.1| probable outer membrane lipoprotein IbeB [Planctomyces maris DSM 8797] Length = 483 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 167/337 (49%), Gaps = 15/337 (4%) Query: 121 DSDWKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 D W+ID++ + R+ +SL L + + I +I+++ +Y + +R+ Sbjct: 111 DISWEIDIWRKLRNSRDAASLRYLATEEGRNYITT-RLIAEIAENYYELLALDKRLETLD 169 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L ++++E++ ++L++ + +AE++ +S+ +++ + I+ L G Sbjct: 170 ITIGLQERSLEVAKANKEAARGTELAVQRFQAEVRKNQSEKLIIQQRLIETENRINFLAG 229 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 YP + +KQ + F+ N++ INIG+P+ ++ NR DIR E++L + +I +A++ Sbjct: 230 RYPQS----VERKQVDFFELNMHT-INIGVPSQMLNNRADIRQAERELQAAGLEIQVARA 284 Query: 298 DLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 YPSL LN + + N P + + G +L P+ ++ IK++ A + Sbjct: 285 RFYPSLVLNAGVGYSAFNPRYLFITPESLVYNAVG-ELVAPVINRRAIKADYLNANARQM 343 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +Q TVLNA EV N + + K V + + ++S+ ++ ++ R + Sbjct: 344 QAVYKYQRTVLNAFTEVVNRINKVENYGKSVEIKKQQLRALEESVDVATKLFQNARAEYV 403 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D+L +R +V L K+Q + V+ Y A+G G Sbjct: 404 DVLLAQRDLQDAKVVLIETKQQQLAAIVNTYQALGGG 440 >gi|116053305|ref|YP_793629.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] gi|115588526|gb|ABJ14541.1| putative outer membrane protein precursor [Pseudomonas aeruginosa UCBPP-PA14] Length = 492 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 117/484 (24%), Positives = 213/484 (44%), Gaps = 54/484 (11%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKW-----WESFND 58 R + + I+L AGC V E +P+ L P G S + + + W W D Sbjct: 12 RLVLASAILLAAGC-VTSEGLEPNARLQPAGALQAGRSLDGVALSPAAWPRQDWWTGLGD 70 Query: 59 TSLNKLVKIALQQ--NLTILQATERINA---------------AKENILSVRADLFPSSY 101 L++L+ ALQ +L I +A R A AK + +RA P+S Sbjct: 71 RQLDQLIGEALQGTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGIRA---PTSV 127 Query: 102 AS--ISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 A + R+ +K S G ++ DL+G +R E++L ++A A++ + + Sbjct: 128 APAPLGGRY-SAIKYLSLG---FNYDFDLWGGERAAWEAALGQANAARIDSQAARIGLSA 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y D H +A + L ++ ELS + + G SK+ L + + ++ + Sbjct: 184 SIARAYSDLAHAFTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQLATARQQ 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + E+ ++ LLG L + Q N +L +P +PA+L+ R DI Sbjct: 244 LSAAEQDIASARIALAVLLGKGPDRGLELQRPQPLN-PASLSLPSV--LPAELLGRRADI 300 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ + I AK++ YP+L+L G AL + + + P + LPIF Sbjct: 301 VAARWRVEAARRNIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAPAISLPIF 360 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++N+ ++ + +T++ A+ EV + L + ++ V + A + + Sbjct: 361 DGGRRRANLAERDADYDLAVGQYNKTLVQALGEVSDDLGKLRSLEQQVIDQRQARNIARS 420 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI----AIGS 448 + L+M Y +G S LD L +++ L +A+RQLA +DL + A+G Sbjct: 421 NFDLAMRRYGEGVGSYLDALSVQQ-------QLLVAERQLASLESQQIDLSVQLVQALGG 473 Query: 449 GYNP 452 G+ P Sbjct: 474 GFQP 477 >gi|330975679|gb|EGH75745.1| outer membrane efflux protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 498 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 96/483 (19%), Positives = 215/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ + H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTHGITPQGSVLHADSLATDQAIQSASLDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDAQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQV----QGNASLMRHD 120 Query: 109 IPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 HRQIDALQEAIALSRNQLAALAGKGPGQGA-ALQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRASAAYDQAVAHYNQTLIMALKNVSDQLIRRASMDKQQALAAE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|257484078|ref|ZP_05638119.1| outer membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 426 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 103/424 (24%), Positives = 191/424 (45%), Gaps = 29/424 (6%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HR 107 + W F D L +L +AL N + A+ + A+ RA P+ AS S H Sbjct: 10 IDWQNFFTDKRLVRLQTLALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHT 69 Query: 108 FIPNLKTNSTG----------QLD-SDWKIDLFG-----QRRHIESSLANLDSAYAQVDI 151 P+ T+ TG QL S +++D+FG Q +E LA ++ + Sbjct: 70 RTPS-STSMTGKSSISHEYSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRS---- 124 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 ++++I+++ ++ + + +A L +++ +L+ G +S L + + + Sbjct: 125 TQISLIAEVATGWLTLAADNQLLKLAEDTLASQQQSYDLTRSSHALGGSSGLEVAQAQTT 184 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++S D+ + + + + L+G E L + Q + + +P+ L Sbjct: 185 VESARGDVAQYKSQILQDRNALRLLVGSDLPEELLPTADVPSVAQ---LVQVPDELPSSL 241 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 ++ RPD+ E L + IG A++ +PS++L GS + + F + WSF P Sbjct: 242 LQRRPDVLSAEHSLKAANIDIGAARAAFFPSITLTANAGSASTSLSGLFTSGSGSWSFAP 301 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + +PIFD G ++ + A+ Q Q T+Q+T+ A KEV +AL + + V Q Sbjct: 302 SISVPIFDGGSNQATLDSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERVAAQQA 361 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + +KS L+ YR G S L+ L+ +R+ E +L + + V LY +G Sbjct: 362 YTDASRKSYELADALYRGGSQSYLEALESQRSLYSAEQELISLRLTEQSNRVTLYKVMGG 421 Query: 449 GYNP 452 G+NP Sbjct: 422 GWNP 425 >gi|284799720|ref|ZP_05984681.2| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria subflava NJ9703] gi|284797329|gb|EFC52676.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria subflava NJ9703] Length = 468 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 96/423 (22%), Positives = 188/423 (44%), Gaps = 40/423 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L++ AL N+ + QA +N A + NIL ADL PS S+ Sbjct: 63 WWEIYQSQQLNALMEQALANNVDLKQAAISVNKALYQANILG--ADLVPSFSGSLGANAS 120 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 NLKT S G QL +++DL+ + ++ + + + + +L +I+ + + Sbjct: 121 KNLKTGSHGNTFSSQLGLSYELDLWRKLSATADAQVWEYQATHEDMANTRLTLINNVADA 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKSIE 216 Y + + E I +A + L Y++ +++ KF +Q +K SL+ E + S++ Sbjct: 181 YFNISYLNEAIELAKKSLKQYQEINRIANAKFHYGRADSSQPTQAKQSLLSAENSLLSLQ 240 Query: 217 SDIPTLEKSFR--MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADL 271 +++ T ++ R +N+ + PA L +P +N+ +P + Sbjct: 241 NNLDTQKQVLRNLLNLRPSENMAADPAQFRL---------------LPVKGVNLDVPITV 285 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKL 330 + NRPD+R E +L S + K YPS++L S++ + D + +N G + Sbjct: 286 LANRPDLRAAEYRLQASQQSVNAQKRSWYPSITLGASLSTSSDKAKSTFNIPMLGGSATI 345 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP + +K + ++ + +++ + A+ EV + + + + Sbjct: 346 NLPFLNWQIMKWKDKTVQAEMDSAKLNFEKALTTALNEVNTNYLAYKNAQASLANQEQRY 405 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIAIGSG 449 +L KK+ + Y+ G+ L D L+ + +L + +R A Y ++ Y A+ Sbjct: 406 QLDKKNSHYYQVRYQHGKNELKDWLEALNSEYSSAQNL-LNQRYEALKYENMVYKAMAGR 464 Query: 450 YNP 452 Y P Sbjct: 465 YTP 467 >gi|289648597|ref|ZP_06479940.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] Length = 462 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 198/440 (45%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D +WW+ F LN+L++ A + + + A R+ A+ + + Sbjct: 31 PARWAFAQSAAAQRSDA-RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALQSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L+ +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|325266106|ref|ZP_08132790.1| outer membrane efflux family protein TolC [Kingella denitrificans ATCC 33394] gi|324982336|gb|EGC17964.1| outer membrane efflux family protein TolC [Kingella denitrificans ATCC 33394] Length = 512 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 105/474 (22%), Positives = 196/474 (41%), Gaps = 42/474 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LLA C T+ + LP FS + I + +WW+++ D L+ L++ L Sbjct: 42 LLLAACQSTTVQTESRI-TLPAAFSQAQAAGEIQ-NLARWWQNWRDPVLSALIEQGLANG 99 Query: 73 LTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFIPNLKT----- 114 I A R+ A+ RADL P+ AS + R L Sbjct: 100 YDIQIAQSRLAEARAQANLARADLGPTVGASGKATHSRSSVDNPLPERARAALSGLPGGG 159 Query: 115 -------NS-----TGQLDSDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLI 161 NS TG L + W+ D+FG++R + Q A++ + + + Sbjct: 160 RLGEEHLNSHGNMFTGALSASWEADIFGRKRSDADAAKAAALGVQEQYYGAQMLLAADIA 219 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y AR + + Q + ++ +F G + ++++ + ++ T Sbjct: 220 EHYFQARAMQAQQRATAQAIAALERLARYVDGRFRAGHVTAYEKGEVQSRLSAMRGKQST 279 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ I+ L+G P F + + + + P +I RPD+R + Sbjct: 280 ERAQEERHIRAIAVLIGQPPQTF--RLADSTADVLAHPPAAPQGETPQSMIERRPDLRAR 337 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 ++ A++ AK+DL P S+N G I L+ D S G++ +S G + +P+F Sbjct: 338 AAQIQARAAQVASAKADLLPRFSINFLGQGGRIELSGDESLKGWSNLFSVG--ISVPLFT 395 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+I++NI A++ Q + + +L A+ + +NA + LQ A K Sbjct: 396 NGRIRANIAAADARLQTALLEYDRALLQALADTDNAYQFQAALARQNALLQAAQRQTAKQ 455 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +R G +L + L + A A+ + L+ ++ A++ V LY A+G G+ Sbjct: 456 AEDAQKLFRYGNKTLDNALTAQIADAQAQEQLTQSRLARAQALVGLYKALGGGW 509 >gi|209517284|ref|ZP_03266128.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209502293|gb|EEA02305.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 499 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 105/476 (22%), Positives = 209/476 (43%), Gaps = 37/476 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLN 62 + + ++ L+ C + TKP+ + P + I +L D +WW ++ D L+ Sbjct: 20 KGVVAVLACTLSACALIRHDTKPYAVIAPEEIRISGDIHLEPGDWPARQWWSAYGDPQLD 79 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASI------SHRFIPNLKT 114 L+ AL + TI+ A R+ AK +I VRA +L ++ A++ S+ F+ T Sbjct: 80 SLIARALTSSPTIVIAHTRVAQAKSDIDLVRAGTNLQVTALAALDRQRVSSNGFLGAYST 139 Query: 115 N-----STG--------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKL 160 N +TG L + ID++G QR +E+++ ++ A+V +L + + + Sbjct: 140 NEPAIGATGPWYTEGIVGLGASLDIDIWGEQRAQVEAAIGVHNTRLAEVAGIELEMSTDV 199 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + + I + Q+ D+ +++ + +G A++ + + + Sbjct: 200 AQIHYGIQTTYQLIDLLSQLRDVAAFDVDAHATRAARGLEPVTQTELARAQLLATQRQLV 259 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 S ++ LLG + L ++ + Q + P + +L+ RPD++ Sbjct: 260 AARASVTQFRESLRALLG-AGPDDLSDIRPVALPLQQSALPPT---LSYELLARRPDLQA 315 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S +I AK+ YPS +N G AL + F + + P LYLPIFD Sbjct: 316 LRWYVQSSFDRIDAAKAAFYPSFDINAFFGLNALHLADLFTHASKQINLIPGLYLPIFDG 375 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ A +++ + E VLNA+++V + L ++++ + + AV + Sbjct: 376 GRLNANLSGARTASNTLIAQYNEAVLNAVRDVAVTGSRLQDLDQEAVLQAEKIDAVSFAE 435 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + +Y +G S L +D +A + + Q + L A+G GY Sbjct: 436 AS---AQAHYERGVASRLTAMDARQAVLLERISMLELDGQRLSHAIALSKALGGGY 488 >gi|152999341|ref|YP_001365022.1| RND efflux system outer membrane lipoprotein [Shewanella baltica OS185] gi|151363959|gb|ABS06959.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS185] Length = 476 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 98/461 (21%), Positives = 205/461 (44%), Gaps = 35/461 (7%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LL+GC + ++ P + + P Q+ + +D WW+ F+ L+KLV Sbjct: 21 MALGIALLSGCGSFMRSDFEPPALAI-PEQWQNTTVNEQVKVD--PWWQQFHQPELDKLV 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNST----GQL 120 L N + AT + A+ R DL+P A++ + R P ++T L Sbjct: 78 SQVLSTNNDLTLATLTLRKARLQAGLTRDDLYPQLSANLGASRNQPLDGGDATKSYQANL 137 Query: 121 DSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAK------LNVISKLIPSYIDARHFKER 173 +++DL+G+ AN+D A +A + A+ ++++ Y + +R Sbjct: 138 SVSYEVDLWGKVS------ANIDQAQWAALASAEDRESTTQSLVATTTSLYWQIGYLNQR 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + + K+ + L+ ++ GA +++++++ + + E+ L + + + + Sbjct: 192 VDLSQKSIAYSKQTLALTQRQYDSGAVTQVNVLEAQRSMAGQEAAHSQLIQQLTVAKNAL 251 Query: 234 STLLGY----PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADS 288 + LL PA Q P++ +P +++G+PADL+ RPD++ +L + Sbjct: 252 AILLNQAPADPAQSLAEIKQL------PDVAVPDVSVGVPADLLVRRPDVKASLYQLRSA 305 Query: 289 VAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +A + +PSLSL G + T + N S G L LP +++ N A Sbjct: 306 LASKDATYASYFPSLSLTGGVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIA 365 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q + +++T+ +A ++V+NA+++ + + KL+ ++ YR G Sbjct: 366 DIDYQTAVVNYRKTLYSAFEDVDNAISAKQQYRYQGEKLEQQFSAAAAVEAIYESQYRNG 425 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + +D + E L + + LY A+G Sbjct: 426 AIGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALGG 466 >gi|326388449|ref|ZP_08210045.1| putative outer membrane multidrug efflux lipoprotein, OMF family [Novosphingobium nitrogenifigens DSM 19370] gi|326207181|gb|EGD58002.1| putative outer membrane multidrug efflux lipoprotein, OMF family [Novosphingobium nitrogenifigens DSM 19370] Length = 470 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 186/428 (43%), Gaps = 42/428 (9%) Query: 18 CTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 C + P Y +P P P + G + L W F D L ++++AL N Sbjct: 18 CNMAPHYVRPESAAPPQWPQGAAYGPEQ--AGAAGLPWRTLFTDPRLQHVIELALANNRD 75 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD----------W 124 + + + +A+ R+ P+ + +KT+ QLDS + Sbjct: 76 LRASLASVASARAQYHVERSYQLPTISGGANASITRGIKTD---QLDSSTYSGTVGMSSF 132 Query: 125 KIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +IDLFG+ R ES LA+ S Y A+L ++++ +Y ++ +SIA Sbjct: 133 EIDLFGRLKNQTRAAFESYLAS-QSGYRS---ARLTLVAETATAYATLASDRDLLSIAQS 188 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 L +++EL+ F G TS + ++ SDI + + + L+G Sbjct: 189 TLASGTRSLELTQELFRSGLTSAGDVQSAITVVEQARSDIANQTTLVAQDRNALELLVGA 248 Query: 240 PATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P + L + + + ++P G+ +D++ RPD+ E +L + A IG A++ Sbjct: 249 PVADDL--LPASLSELDGTIGHVPA--GVSSDILLQRPDVLQAEHQLQGANASIGEARAA 304 Query: 299 LYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P++ L ++ L + F G +W+ P +PI G K N++ A++ Sbjct: 305 FFPTIKLTSAVGLASSALSSLFTGGALNWNVTPSASVPIL-GGVTKGNLQYAKAQRDYYL 363 Query: 356 ITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 +++TV +A ++V ++L +I + + +L A E K+ +L+ YR G + L Sbjct: 364 AQYEKTVQSAFRDVADSLARRGTIVDQRGAQARLVAASE---KAYTLADEQYRAGTGTFL 420 Query: 413 DILDIERA 420 L +R+ Sbjct: 421 TALVDQRS 428 >gi|332519316|ref|ZP_08395783.1| RND efflux system, outer membrane lipoprotein, NodT family [Lacinutrix algicola 5H-3-7-4] gi|332045164|gb|EGI81357.1| RND efflux system, outer membrane lipoprotein, NodT family [Lacinutrix algicola 5H-3-7-4] Length = 472 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 110/473 (23%), Positives = 214/473 (45%), Gaps = 34/473 (7%) Query: 2 NILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNL----INIDTLKWWESF 56 N+ + L + L L C V +Y +P + ++ + NL ++I + W F Sbjct: 9 NLSKGALILVVALTLQSCFVAQDYVRPDVN--AETEALYRTDNLPTDSVSIADVSWKNLF 66 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY--ASISHRFIPNLKT 114 D L + ++ LQ N+ + A ++I AA+ +A PS A+ +H+ L Sbjct: 67 TDQYLQQYIEEGLQNNMDVRIALQQILAAQAYAKQGKAGYLPSVSVGANATHQ---ELSE 123 Query: 115 NS------TGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 NS +G +D+ W+ D++G+ R + ++ A + A K ++S + Sbjct: 124 NSQFGALFSGAIDTYDITANLSWEADIWGKIRSNKRATQAAYLQSVAGHQAVKTQLVSSI 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + ++ + Q + ++ G +++++ + A+ S ++ Sbjct: 184 ANTYYNLLALDAQLEVTKQTIITRDSSVTTIKALKDAGQVTQVAVDQNIAQYNSAKALQV 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +E + + +S LLG F ++ S + Q N+ I +G+PA L+ NRPD+ Sbjct: 244 DIEVAIFKTENTLSILLGKTPQTF----ERSSLDIQ-NIDQNIVLGVPATLLSNRPDVMA 298 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 E L +S +A+S+ YPSL+L G +L D + + L PIF++ Sbjct: 299 AEYGLINSFELTNVARSNFYPSLTLTASGGFQSLELDKLLNANSLFATIIGGLTQPIFNQ 358 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 KIK+ A + ++ + +++T+L A EV NAL + + K ++ VE + + Sbjct: 359 RKIKTQKEVALAQQEQALLEFKKTLLVAGSEVSNALYTYKAETKKFEFRKNEVEALRTAE 418 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S + G + LD+L + E+++ ++ Q S VDLY A+G G+ Sbjct: 419 ANSNELLKNGYANYLDLLTARESALNAELNIIDSQLQQLVSIVDLYEALGGGW 471 >gi|330810616|ref|YP_004355078.1| efflux protein; outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378724|gb|AEA70074.1| putative efflux protein; outer membrane lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 489 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 95/439 (21%), Positives = 193/439 (43%), Gaps = 28/439 (6%) Query: 4 LRAIFSLFIVL--LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESF 56 LR SL ++ LAGC + L G S N + + WW+S Sbjct: 6 LRTRLSLVVLAMSLAGCASYSGLKTEGVSLEAQSLKAGQSLNGVTLSQAAWPKSDWWKSL 65 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFI 109 D L+ L++ AL+ + + A+ R++ A + A P+ S + +S Sbjct: 66 GDPQLDGLIREALRDSPDMQIASARVHQASAAAYAANAARLPTLDASGGASRSRLSRDQD 125 Query: 110 PNLKTNS-----TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 P + + T +D ++ DL+G QR E++L +A A+L + + + + Sbjct: 126 PQGQGGAYSTLRTLGVDFNYNFDLWGGQRATWEAALGQARAAEIDRQAAQLTLAADVARA 185 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y D +A + L ++ ++L + T G S+ + E+ S ++ + E Sbjct: 186 YSDLGQAHIIYDLASEDLKRTRQMLDLGKRRLTAGIDSEYQFQQTESLEASADATLIDAE 245 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN-LYIPINIGIPADLIRNRPDIRYQE 282 K + ++ LLG + N Q + + +P N+ PA+L+ RPD+ Sbjct: 246 KRLQSAKIALAVLLGKGPDRGNEI--PRPNVLQASAVALPSNL--PAELLGRRPDLVAAR 301 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++ + I K++ YP+L+L+ G+ +L D F + ++ P + LPIFD G+ Sbjct: 302 WRVEAASKNIEAGKTNFYPNLNLSAAAGTRSLLGDAMFGSASRFFNVAPTVSLPIFDGGR 361 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++++ ++ + ++++ A+ +V + + + + + + QHA ++ + S Sbjct: 362 LRADLDARDADYDLAVAQYNKSLVTALGDVSDTINQLRDIARQIGAQQHATDIAQSSYDT 421 Query: 400 SMINYRQGRYSLLDILDIE 418 + Y G + LD+L IE Sbjct: 422 VVQRYGSGIGNYLDVLSIE 440 >gi|167562998|ref|ZP_02355914.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia oklahomensis EO147] Length = 403 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 163/349 (46%), Gaps = 25/349 (7%) Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 N+TG L + +DL+G+ + + E +L + A A+L + + ++ +Y+D Sbjct: 31 NNTGTLSLSYHLDLWGKDKNNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYAL 90 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + IAH + ++ EL+H + G ++L + + EA + I + E++ ++ H + Sbjct: 91 LDIAHTTYERQRELAELAHKRLRAGIGTQLEVSQAEAPLPDYSRQIDSYEEAIQLGRHQL 150 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLADSV 289 + L G ++ +P L + G+P A+LI RPD+ + Sbjct: 151 AALAGKGPG-------AGASLARPRLALDATAGLPSALPAELIGRRPDVVAARWTVGAQA 203 Query: 290 AKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 I +AK+ YP++ SL G +++ N WS GP L LPIF+ G++++ + Sbjct: 204 RGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQL 263 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A + E + +T++ A+K++ + + ++ AV L ++S LS + Sbjct: 264 GVASAGYDEAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVALTRRSYDLSHTGF 323 Query: 405 RQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLYIAIGSG 449 +G L D +++ A +++ E I +LA ++ L +A+G G Sbjct: 324 SRG---LTDYVNVLLAQSQLLTAQENQTRIEAARLA-AHASLMVALGGG 368 >gi|170694518|ref|ZP_02885671.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] gi|170140652|gb|EDT08827.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia graminis C4D1M] Length = 500 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 104/480 (21%), Positives = 222/480 (46%), Gaps = 47/480 (9%) Query: 3 ILRAIFS-LFIVLLAGC-----------TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL 50 +L+A S +F +L+ C T GP+ TQ SI + + Sbjct: 14 LLKAGVSIMFAAVLSACANYAGIHSDAKTAGPQQ-------YATQQSIPAEQG--HWPAA 64 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR 107 W + F D L L+ AL+ + T+ QA R++AA + +A P +SY+ + Sbjct: 65 DWADQFGDAQLKALIDEALKSSPTLDQARSRVSAAAAYSETAKAGTMPRVDASYSLTRQQ 124 Query: 108 F-----IP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 F +P + +T + G L++ + +DL+G+ R ++++++ L ++ A ++ KL + Sbjct: 125 FSGTALVPPPYGGSWQTENKGLLNASYDLDLWGKNREALKAAISQLQASQADAEVVKLTL 184 Query: 157 ISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + +Y AR + R IA Q + ++ ++ + G +++ +A + + Sbjct: 185 TTSIARTYNQLARLYLLR-DIAQQEVTQREQIERITAGRIATGLDTEVERKTAQANLATS 243 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + + +L+ + I+ LLG L + + S + +P N+ PADL+ R Sbjct: 244 RAALKSLDGQILATRYQIAALLGAGPDRGLQ-IARPSLGLGDEVRLPDNL--PADLVSRR 300 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYL 332 PDI ++ + AK++ YP ++L+ +I L + S GP ++L Sbjct: 301 PDIVAARWRVDAMTHDVKEAKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASAGPAIHL 360 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD G +++ ++ + T+ +T++ A+ EV + L ++ + Q A + Sbjct: 361 PIFDAGALRAQLKGRYADFDYAVATYNQTLVTALSEVASQLANVRSTDAQLVDAQAAQDA 420 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 +++ L+++ Y+ G + L +L+ + + D ++A ++++ + L A+G G+ Sbjct: 421 AREADRLALVQYKAGLTNQLTVLNAD--VNALSADQAVANLRMSRRDQQIALASALGGGF 478 >gi|167572545|ref|ZP_02365419.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 566 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 104/480 (21%), Positives = 201/480 (41%), Gaps = 42/480 (8%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS----------KNLINIDTL 50 M +L +L I A C++ P Y +P P+ P+ + G + ++ L Sbjct: 1 MRVLPIALALGI---AACSMEPTYKRPDAPI-PSAYPSGPAYSAPGGPATPQSGPAAPDL 56 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHR 107 W F D L +L+ AL N + AT I+ A+ RA FP+ A+ S R Sbjct: 57 GWRNFFVDAQLQQLIARALANNRDLRIATLNIDEARALYRIRRAAQFPAIDANAGLTSER 116 Query: 108 FIPNLKTNSTGQLD---------SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAK 153 P L+ L +++++D+FG+ R + E LA + A V I Sbjct: 117 LSPALRAPGQSALINTYAASVGLTNFELDVFGRVRSLSHAAQEQYLAT-EEARRSVHI-- 173 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 ++++++ +Y+ + + +A L + E+ H GA ++L + + +++ Sbjct: 174 -SLVAEVANTYLTLLADRALLKLAQDTLKSQQDAAEMIHRGKQAGAMAQLDEHRADTQVQ 232 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + + + + + + L G P + + L G+P+ L+ Sbjct: 233 TAQVAVEQFTRQVAQDENALILLTGGPLPSGVSSAAPLDSQ---TLLAEFPAGLPSTLLE 289 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKL 330 RPDI E +L + A IG A++ +P ++L G++ + F G W F P+L Sbjct: 290 RRPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVASASLAGLFSG-GVAWLFAPQL 348 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G ++N+ A ++ T+ A +EV +++ + ++ + + Sbjct: 349 TLPIFNAGSNRANLDLATVRRDINVANYERTIQGAFREVSDSMAARGTYEREAKAQETMI 408 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 409 RDLSETKRLAEMRFRNGVDDYFGVFDAQRQLFTAQQSLVTYKLAGLTSRVTLYKALGGGW 468 >gi|323136574|ref|ZP_08071655.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] gi|322397891|gb|EFY00412.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] Length = 516 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 100/479 (20%), Positives = 198/479 (41%), Gaps = 47/479 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLK-WWESFNDTSLNKLVKIALQ 70 + L GC + E+ KP + P + F + I K + F L LV+ AL Sbjct: 24 IALIGCDL--EWEKPDLATPPPERFREARPASAAPIPAGKDFAAKFGSKELTALVEKALA 81 Query: 71 QNLTILQATERINAAKENILSVRADLFPS-SYASISHRF-IP----NLKTNSTGQ----- 119 NL I A RI+ A A L+PS S ++ IP N+ + STG Sbjct: 82 DNLDIAAAVARIDEADAQARVASAALWPSISMLDVARTTRIPGTTLNIASASTGANPATQ 141 Query: 120 --------------------LDSDWKIDLFGQRRHIESS---LANLDSAYAQVDIAKLNV 156 L++ ++ID +G+ ++ LAN ++ D ++ Sbjct: 142 GTTTTATGFKARHFGFFQLGLNASYEIDFWGKNEDASNAARLLAN--ASRFDRDTVEIAT 199 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ ++ +Y ++R+ IA + + +K + +FT G S L + E + Sbjct: 200 VAAVMNAYFQVLTAQDRVRIARSNVAIAEKVNDAIQARFTVGTASALDTAQQETVLAQQR 259 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + IP LE++ + ++ LLG + + + + I G+P++++ RP Sbjct: 260 AAIPPLEQTLLQTKNVLAVLLGRTP----ESVNVKGGSLTKLTFPKIAPGLPSEVLLRRP 315 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLP 333 D+ E +LA + A++ +PS++L G + N W L P Sbjct: 316 DVANAEAQLASQEFSVLQARAAFFPSVTLTGQYGVQTALLRNLIRPEAIAWQAATNLAQP 375 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD ++ + E +++ +L A+ +VENAL ++ E + + AV Sbjct: 376 LFDGYNLQGQYELQKGRYAELASLYRKQILTALSDVENALIAVRETAQQLKLQGAAVNAA 435 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +++ + + ++G ++ + ER + ++ + ++ LY A+G G++P Sbjct: 436 RRAYDAAFMRLQEGTIDIITLSTTERDLFTTQEAEAVVRLNYFQAATSLYQALGGGWSP 494 >gi|261365561|ref|ZP_05978444.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria mucosa ATCC 25996] gi|288565993|gb|EFC87553.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Neisseria mucosa ATCC 25996] Length = 460 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 93/395 (23%), Positives = 182/395 (46%), Gaps = 39/395 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L+ AL+ N+ + QA +N A + NIL ADL PS S+ Sbjct: 55 WWEIYQSPQLNALMAQALENNIDLKQAAINVNKALYQANILG--ADLVPSFSGSVGASTS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQRRHIESSLANL-DSAYAQVDIA--KLNVISKLI 161 NLKT S G QL +++DL+ R+ ++ A + + + D+A +L +I+ + Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLW--RKLSATADAQVWEYQATRQDMANTRLTLINNVA 170 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKS 214 +Y + + E I +A + L Y++ ++ KF +Q +K SL+ + + S Sbjct: 171 DAYFNIAYLNEAIELAQKSLKQYQEINRIAEAKFRYGRADSSQPTQAKQSLLSAQNSLIS 230 Query: 215 IESDIPTLEKSFR--MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 +++ + T ++ R +N+ T+ PA L ++ +N+ +P ++ Sbjct: 231 LKNSLDTQKQVLRNLLNLKPNETIAADPAQYRLPSVKG------------VNLDVPITVL 278 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLY 331 NRPD+R E +L S+ + K YPS++L S++ + + + +N G + Sbjct: 279 ANRPDLRAAEYRLQSSLQSVEAQKRSWYPSITLGASLSTSSEKAKSAFNIPLLGGSATIN 338 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP + +K + A+++ + +++ + A+ EV + + + + Sbjct: 339 LPFLNWQTMKWKDKTAQANFDSAKLNFEKALTTALNEVNTNYLAYQNAQAALNNQEQRYA 398 Query: 392 LHKKSMSLSMINYRQGRYSL---LDILDIERATAK 423 L KK+ + Y+ G+ L L+ L E +A+ Sbjct: 399 LDKKNSRYYQVRYQHGKNELKYWLEALSTEYGSAQ 433 >gi|223039922|ref|ZP_03610205.1| TolC protein [Campylobacter rectus RM3267] gi|222878790|gb|EEF13888.1| TolC protein [Campylobacter rectus RM3267] Length = 451 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 93/464 (20%), Positives = 215/464 (46%), Gaps = 35/464 (7%) Query: 4 LRAIFSLF-IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTS 60 +R I ++ +V +GC LL S ++ N TL+ WW+ +N Sbjct: 1 MRKILTIIAVVFFSGCAATQINKNYEQILLDANASSNSTANF----TLERDWWKGYNQPR 56 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST--- 117 LN+L+++AL+ N+ + ++ +N A ++ADL PS A++ N+KT + Sbjct: 57 LNELIELALKNNIDLAKSAIAVNKALAQAGVLQADLVPSFNANLGAETGKNIKTGGSWNE 116 Query: 118 ---GQLDSDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISKLIPSYIDARHFK 171 + ++IDL+ R+ S+ A + A A ++ A+L ++S + Y + + Sbjct: 117 SYKSGVSLSYEIDLW--RKLASSADAAIWEANATKYDLEAARLALVSSVAEKYFEILYQN 174 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E +++ +L YK+ ++ KF G +LSL ++++ I S ++ I +KS Sbjct: 175 ESVNLYKILLQNYKQLETVARAKFELGKEEELSLKQIKSSILSAQNRILNAQKSIDAAER 234 Query: 232 NISTLLG-YPATEF-----LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + LL P E L + Q +N+ +P +I RPD++ ++ Sbjct: 235 TLQNLLNERPGFELNSGGDLSEVSPQG----------VNLNVPLYVIGARPDLQAAIARI 284 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNI 344 +++ + ++ YPS++L ++ +++ ++ + G + LP + K+KS + Sbjct: 285 KEALLNVHSSEKSFYPSVTLGAGLSGGGNSASDAFSLKFLNGNVAINLPFLNYSKLKSRL 344 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + +E + + + + +T+ A+ E++ + ++ +D+ ++ + + + + Y Sbjct: 345 KISELTFETMKLNYAQTLTTALNEIDASYKNLQKDEAVLRNINENLRNLSSISDIYKLKY 404 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G+ L + L+ + + + V + K ++ + +++Y A+ Sbjct: 405 ELGKTELKNYLEAQNSLLEGRVGMLAQKYKILQDEMNVYKAMAG 448 >gi|86142971|ref|ZP_01061393.1| putative outer membrane lipoprotein [Leeuwenhoekiella blandensis MED217] gi|85830416|gb|EAQ48875.1| putative outer membrane lipoprotein [Leeuwenhoekiella blandensis MED217] Length = 487 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 118/489 (24%), Positives = 219/489 (44%), Gaps = 57/489 (11%) Query: 1 MNILRA------IFSLFIVLLAGCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWW 53 N++R+ FSL LL C + +Y KP + + + + W Sbjct: 5 FNVMRSNIIYIYAFSLSF-LLVSCGITKDYEKPEADTEALFRKEMAAEVEVPEAPLMHWD 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------- 105 + F+D L ++ L +N ++ A +R+N+A + + PS S S Sbjct: 64 QFFSDPYLLNYIEEGLTENYSLKNAIQRVNSANALLKQSKKAFLPSLEGSASVAKSRLSY 123 Query: 106 ---HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLI 161 FI ++ G + + W+ D++G+ + +SLA A Q +K + S+L+ Sbjct: 124 TQGFGFIKDVTQYDLG-ISTSWEADVWGKLSSAKRASLA----ALLQTQASKQAIESQLV 178 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL---------SLVKLEAEI 212 + A ++ + I++ Q+ L + + KF KL ++V+ EA Sbjct: 179 ANI--AINYYQLIALDKQLETLEET---AENRKFYVATMKKLKSSNMVNGAAVVQSEANQ 233 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADL 271 E IP +++ R + +S LL E +Q+ + + +P ++IG PADL Sbjct: 234 YEAELLIPDVKQQIREIENALSILLARKPGE----IQRSGFDDFAEMNMPELSIGDPADL 289 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFP-GYNTHWSFG 327 + NRPD+ E + + +A++ YPS L+GS + D+ F + Sbjct: 290 MANRPDVMQAELEYRRAFELTNVARTQFYPSFGLSGSAGFSSFEWDDLFTKNIGLFGNIA 349 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L PIF+KG K+N+ A++ Q + +QE +L+A KEV +A+ + ++K Sbjct: 350 AGLMQPIFNKGINKANLATAKAEQQIAFNNFQEALLDAGKEVSDAVFAFKTANSKISKRA 409 Query: 388 HAVELHKKSMSLS--MINYR-QGRYSLLDILDIERATAKVEVD--LSIAKRQLAKSYVDL 442 +E KS+ + ++ Y Q Y+ D+L E++ + E++ + +LA +DL Sbjct: 410 LQLEALNKSVDYTKKLLQYNSQTNYT--DVLTAEQSLLRAEINNINDVLAEKLA--LIDL 465 Query: 443 YIAIGSGYN 451 Y A+G G+N Sbjct: 466 YKALGGGWN 474 >gi|253570483|ref|ZP_04847891.1| multidrug efflux pump channel protein [Bacteroides sp. 1_1_6] gi|251839432|gb|EES67515.1| multidrug efflux pump channel protein [Bacteroides sp. 1_1_6] Length = 456 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 106/467 (22%), Positives = 205/467 (43%), Gaps = 43/467 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT-----LKWWESFNDTSL 61 I S ++L+ C + Y K + P+ + S+ +++ DT L W E F D+ L Sbjct: 7 ILSAATLVLSSCGI---YNK-YKPVSEVPEGLYGSETVVSADTANFGNLSWREVFTDSYL 62 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNST 117 L+ AL +N + A R+ A+ ++L+ + PS + ++S + Sbjct: 63 QNLIDSALVRNTDMQTAHLRVEEAEASLLTSKLSYLPSLFLAPEGAVSSFDRGKATQTYS 122 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKER 173 + + W++D+FG+ + ++ +AY Q K ++S + +Y + Sbjct: 123 LPVTASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVSAVANTYYTLLMLDAQ 179 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I+ +K+++ + G ++ L + EA +I + + L++ +++ Sbjct: 180 YEISVSTEAAWKESVRTARAMKKAGMMTEAGLAQTEATYYNICTAVLDLKEQINQTENSM 239 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LL E H +Q+ Q L ++GIP ++ NRPD+R E LA + Sbjct: 240 ALLLA----ETPHKIQRGKLENQ-QLPEDFSVGIPLQMLSNRPDVRSAEFSLAQAFYTTN 294 Query: 294 IAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ YPS++L+GS T+ PG S L P+F+KG + ++ A++ Sbjct: 295 AARAAFYPSITLSGSAGWTNSAGSMIINPGKFVA-SAVASLTQPLFNKGVNIAQLKIAKA 353 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLSMI 402 +E +++++T+LNA EV AL + K +T LQ A +S SL M Sbjct: 354 QQEEARLSFEQTLLNAGVEVNEALVQYQTAREKSAFYDKQITSLQTAA----RSTSLLME 409 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + Y L++L ++ + + + + LY A+G G Sbjct: 410 HSNNTTY--LEVLTAQQTLLNARLSQVANRFTEIQGVITLYQALGGG 454 >gi|331010695|gb|EGH90751.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 462 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 197/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D +WW+ F LN+L++ A + + + A R+ A+ + Sbjct: 31 PARWAFAQSAAAQRSDA-RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQATAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALQSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L+ +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|114564831|ref|YP_752345.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Shewanella frigidimarina NCIMB 400] gi|114336124|gb|ABI73506.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Shewanella frigidimarina NCIMB 400] Length = 467 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 107/463 (23%), Positives = 203/463 (43%), Gaps = 29/463 (6%) Query: 6 AIFSLFIVLLAGCTV----------GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWES 55 A+ +L +V L GC+ K L+ + N++ + + + + Sbjct: 10 AMLALIVVSLLGCSTVDNSNYIDQASQAQAKTSQQLIEQLLATKNTQGVPSQSLARLTDL 69 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN 115 N L + ALQ N ++ Q+ +N A A PS AS S + + Sbjct: 70 INVPELQTFISAALQNNPSLQQSVVALNMAYAQHGITSASRLPSVDASFSGTSTEDSDDS 129 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 T + W++DL+ + ++L ++ S A + A+ V++ ++ S++D ++ + Sbjct: 130 YTTDITVSWELDLWQKIADSSNAALKDIASTQASLQSAQDLVVANVMRSWLDISLKQQLV 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +I Q L + N L ++ G S L + S ++ + ++ + N++ Sbjct: 190 AIETQRLAVLDNNQALILARYRVGLGSLEDLDNATTSVASTQATLVDYQEQLAQSRRNLT 249 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L G + ++ + Q F P + PI+ +L R RPDI+ + + Sbjct: 250 LLTGQWTGSDVSVDISAQ---F-PTVLNPIDSLGQQNLGR-RPDIKTAFYNIEAESLRTD 304 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A + PS+SL+ S++ + T WS +L P+F GK+ S A + Sbjct: 305 AAYKAMLPSISLSASLSDMAQSPSDALLTGPLWSVLGQLSAPLFQGGKLTSQAELARLTT 364 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH---KKSMSLSMINYRQGR 408 Q++Y +QET+LNA+ EVEN S+ ++ + + QH + ++S YRQG Sbjct: 365 QQRYWVYQETLLNAVNEVEN---SVGQEYSLAKQQQHLTDAQLSAQRSFVSYEQKYRQGL 421 Query: 409 YSLLDILDIERATAKVEVDL--SIAKRQLAKSYVDLYIAIGSG 449 + D+L +++ T VE L +I R + + +DL +A+G G Sbjct: 422 VDIFDLLTVQQQTFDVEAQLVTTIYNRLINR--IDLGLALGLG 462 >gi|221201989|ref|ZP_03575025.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia multivorans CGD2M] gi|221204881|ref|ZP_03577898.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia multivorans CGD2] gi|221175738|gb|EEE08168.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia multivorans CGD2] gi|221178072|gb|EEE10483.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia multivorans CGD2M] Length = 490 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 110/471 (23%), Positives = 205/471 (43%), Gaps = 42/471 (8%) Query: 9 SLFIVLLAGCTV----GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 SL ++LA C P T+ + + + S+ D WW ++ D L+ L Sbjct: 13 SLGALVLAACATPGDRAPRATRVDPATVASGLATSASRTAWPRD--GWWRAWRDPQLDTL 70 Query: 65 VKIALQQNLTILQATERIN----------AAKENILSVRADLFPSSYASISHRFIPNLKT 114 V A+ N I A R + A + +V AD + +A + P T Sbjct: 71 VADAIAGNPAIRVAQARADRFVELARIAGATRYPSAAVDADFSRARFARYASPSPPGGNT 130 Query: 115 ---NSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARH 169 NS G D + +DL+G+ R E +LA++ +A A A+L + + ++ +YI A+ Sbjct: 131 VWNNSVGA-DLRYALDLWGKHRSEHEGALADVQAAAADARAARLMLETAVVRTYIVFAKT 189 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 F R +A L + + + + G S+ L + I + + I L++ + Sbjct: 190 FDHR-DVALATLKRQQDIVGIVERRARAGLASRFELTQASTPIAATRAQIEALDRQIAVL 248 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + ++ L G P + + + + +P N+ PA+L+ +RPD+ ++ Sbjct: 249 RNELAVLAGRGPGAG--APLARPALRLDVPVALPANL--PAELVGHRPDVVAARWRIESM 304 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--------NTHWSFGPKLYLPIFDKGKI 340 + + AK+D YP++ L S L +F G+ TH FG + LPIFD G+ Sbjct: 305 SSAMRAAKADFYPNIDLIASAGLAS-AAFGGFFTLVNNDAMTH-RFGAAISLPIFDGGRR 362 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + A + T+ + VL A ++V N + S+ + +Q + + ++++ + Sbjct: 363 QGRYGAAVADYDVAVETYNQAVLGAFRDVANHIESLQSLARQQADVQASADTARRAVDYA 422 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSG 449 M YR G L +L E T +++ S+A + A+ ++ L A+G G Sbjct: 423 MQGYRAGLTDYLTVLSTE--TERLQAQQSLADVRAARLDAWAQLMAALGGG 471 >gi|28868430|ref|NP_791049.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851668|gb|AAO54744.1| outer membrane efflux protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331015288|gb|EGH95344.1| outer membrane efflux protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 498 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/483 (20%), Positives = 216/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTHGITPQGIVLHADSLATDQAIQSASLDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDAQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQV----QGNASLMRHD 120 Query: 109 IPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTHTWDNNASLGLSYALDLWGRERNASEQAVDLAHMSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLALRRLKGGIGTHFDVSQAETPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 HRQINALQEAIALSRNQLAALAGKGPGQGA-ALQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A +D YP+++L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHADFYPNVNLVGSLSYMATGGGLLEFLNGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + R ++ + + +T++ A+K V + L TS+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRVSAAYDQAVAHYNQTLVMALKSVSDQLIRRTSMDKQQALAAE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLMVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|152983667|ref|YP_001346596.1| hypothetical protein PSPA7_1211 [Pseudomonas aeruginosa PA7] gi|150958825|gb|ABR80850.1| hypothetical protein PSPA7_1211 [Pseudomonas aeruginosa PA7] Length = 496 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 98/477 (20%), Positives = 213/477 (44%), Gaps = 46/477 (9%) Query: 8 FSLFIVL---LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 F F+V+ ++GC + P+ L T +I + +WW+++ D Sbjct: 5 FVGFLVVFSAISGCVSTGDIAPQAATLDANALATDPAIRAAAREAGWPQAQWWKAYADPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN------ 111 L+ + AL N ++ A R+ AK + S+ + + + HR+ + Sbjct: 65 LDAWIDKALDGNPSLAVAHARVRQAKSMAGLVESIESPQIQGKGSLVRHRWPDDYFYGPG 124 Query: 112 -----LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYI 165 N++ ++ ++K+DL+G+ R +L A A+ A+L + ++ +Y+ Sbjct: 125 DLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDLAHMAAAEARQAQLELEGNIVRAYV 184 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + IA +L + + L+ + G + + + E + E I +++ Sbjct: 185 QLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGLGTHFEVSQAEVPLPETERRIEVIDEE 244 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 +++ + ++ L G E + + + QP+L + PA+L+ RPD+ + + Sbjct: 245 IQLSRNLLAALAGKGPGEGRTIRRPRLDLAAQPSLPSVL----PAELLGRRPDVVARRWQ 300 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGK 339 +A + +A++D YP++ L S+ + F +S GP + LPIFD G+ Sbjct: 301 VAALAKGVDVARADFYPNVDLMASVGFSAVGGGMLEFFRSAKYTYSAGPAVTLPIFDGGR 360 Query: 340 IKSNIRRAES---SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELH 393 ++S + A + +A EQY +T+++A+K + + L S++ K + +V Sbjct: 361 LRSQLGEAAAGYDAAVEQY---NQTLVDALKNISDQLIRLHSVDVQKDFAAQ---SVASA 414 Query: 394 KKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +K+ ++ + Y++G L++L+ + R + V + +LA ++ L A+G G Sbjct: 415 QKTYDIATLAYQRGLTDYLNVLNAQTRLFQQQLVQEQVRAARLA-AHASLVTALGGG 470 >gi|225075395|ref|ZP_03718594.1| hypothetical protein NEIFLAOT_00400 [Neisseria flavescens NRL30031/H210] gi|224953213|gb|EEG34422.1| hypothetical protein NEIFLAOT_00400 [Neisseria flavescens NRL30031/H210] Length = 460 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 96/423 (22%), Positives = 188/423 (44%), Gaps = 40/423 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WWE + LN L++ AL N+ + QA +N A + NIL ADL PS S+ Sbjct: 55 WWEIYQSQQLNTLMEQALANNVDLKQAAISVNKALYQANILG--ADLVPSFSGSLGANAS 112 Query: 110 PNLKTNSTG-----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 NLKT S G QL +++DL+ + ++ + + + + +L +I+ + + Sbjct: 113 KNLKTGSHGNTFSSQLGLSYELDLWRKLSATADAQVWEYQATHEDMANTRLTLINNVADA 172 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKF-------TQGATSKLSLVKLEAEIKSIE 216 Y + + E I +A + L Y++ +++ KF +Q +K SL+ E + S++ Sbjct: 173 YFNIAYLNEAIELAKKSLKQYQEINLIANTKFRYGRADSSQPTQAKQSLLNAENSLLSLQ 232 Query: 217 SDIPTLEKSFR--MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADL 271 +++ T ++ R +N+ + PA L +P +N+ +P + Sbjct: 233 NNLDTQKQVLRNLLNLRPSENMAADPAQFRL---------------LPVKGVNLDVPITV 277 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKL 330 + NRPD+R E +L S + K YPS++L S++ + D + +N G + Sbjct: 278 LANRPDLRAAEYRLQASQQSVNAQKRSWYPSITLGASLSTSSDKAKSTFNIPMLGGSATI 337 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP + +K + ++ + +++ + A+ EV + + + + Sbjct: 338 NLPFLNWQTMKWKDKTVQAEMDSAKLNFEKALTTALNEVNTNYLAYKNAQAGLANQEQRY 397 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIAIGSG 449 +L KK+ + Y+ G+ L D L+ + +L + +R A Y ++ Y A+ Sbjct: 398 QLDKKNSHYYQVRYQHGKNELKDWLEALNSEYSSAQNL-LNQRYEALKYENMVYKAMAGR 456 Query: 450 YNP 452 Y P Sbjct: 457 YTP 459 >gi|88813588|ref|ZP_01128820.1| putative outer membrane chanel lipoprotein [Nitrococcus mobilis Nb-231] gi|88789150|gb|EAR20285.1| putative outer membrane chanel lipoprotein [Nitrococcus mobilis Nb-231] Length = 472 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/434 (21%), Positives = 184/434 (42%), Gaps = 44/434 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----- 105 +WW+ F LN+L+ IAL N + A+ R+ AA + A L P A Sbjct: 24 RWWKKFGSPELNRLMDIALADNPGLKVASARLRAAHALVRVEGARLLPFLEADAELTAER 83 Query: 106 ---HRFIPNLKTNSTG---------QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIA 152 H L G L W++D +G+ R +ES+L + A+ Sbjct: 84 ISEHGVFAALNPEVGGISIALGLVNPLSFRWELDFWGKNRAMLESALGRAMARDAERADV 143 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L + + + SY ++++ + ++ L + ++L+ ++F G S+++ AE+ Sbjct: 144 RLLLTTAVARSYFRGVSLRQQLEVVDAMVALRRDLLKLAKIRFRLGLDDATSVMRATAEL 203 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL- 271 ++ + + + L+G+ ++ H + F IP I +P +L Sbjct: 204 ETANKREAGTREQLDFQKYLLVRLIGH-GPDWGHDL------FADTALIPRRIPLPEELP 256 Query: 272 ---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNS--------F 317 + RPD+ + + + I +AK+ P++ L G + ALT + F Sbjct: 257 IGLLARRPDLAAAKYRAEAAAKLIKVAKTRFLPTIDLTGFVGFRALTLASGYGALPGLLF 316 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIR--RAESSAQEQYITWQETVLNAIKEVENALTS 375 G + + GP L LP F+ G+++ ++ RAE A + + +T+L A++EV ++L+ Sbjct: 317 SGSSLAYGGGPGLRLPWFEGGRLRGELQAQRAEYDAAVEL--YNDTLLEAMREVADSLSV 374 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 +E + ++ + + L + +R G ++L A K E L + Sbjct: 375 WHETRAMLEAHRRLLTSVSDDWRLIQVRFRSGLDDRREVLKQRHAVLKQEFALKALEADQ 434 Query: 436 AKSYVDLYIAIGSG 449 + V L A+G G Sbjct: 435 LVAMVGLIEALGGG 448 >gi|330875751|gb|EGH09900.1| outer membrane efflux protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 462 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/422 (21%), Positives = 189/422 (44%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L+ A + + + A R+ A+ + A L P ++ Sbjct: 48 QWWQRFGSPELNRLIAQASRDSHEVAAAMARVRQAQATAIIGGAPLLPELAFDLRGERNK 107 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S++ L ++ +L Sbjct: 108 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSAVQGLRASEFDQATVELT 167 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++S + Y +E+ IA L + ++L +F G+ + L L + + + + Sbjct: 168 LLSNVADRYAQTLAAREQGRIAGLNLANAQSVLKLVQTRFDSGSATALELAQQKNLVATQ 227 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + ++ LLG P + + F + I G+P+DL+ R Sbjct: 228 QRELPRIQQLANEQLITLAALLGQP----VQSLTLSDQAFDTLNWPDIGAGVPSDLLTRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +LA + A + +A++ + P L+L+ + + + S L PI Sbjct: 284 PDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + +A + QE T++ +++N+ +VE AL SI+ D++ + H EL Sbjct: 344 FNNGRLSAERDKATARQQELLETYRGSIINSFADVEKALNSISGLDQQ---RYWHDEELA 400 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++ Y G LL +L+ +R V V L +A+ Q + + LY +G Sbjct: 401 QAQTAFRIAQSRYEAGAEDLLTVLETQRTLYLAQDVSVQLRLARVQ---ASIALYKTLGG 457 Query: 449 GY 450 G+ Sbjct: 458 GW 459 >gi|317402293|gb|EFV82871.1| multidrug efflux outer membrane lipoprotein [Achromobacter xylosoxidans C54] Length = 425 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/409 (22%), Positives = 191/409 (46%), Gaps = 20/409 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW +FND L+ LV AL +N + A R+ A+ + L P + + N Sbjct: 9 WWRNFNDPVLDGLVDGALARNNDLAAAAIRVRRAQLQAGLAQDQLIPQLSGTGNVTRARN 68 Query: 112 LK-------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 L+ TNS +L +++DL+G+ R ++++ ++ + L+++ Sbjct: 69 LRGEREITRTNSA-ELSIGYEVDLWGKLSRQLDAAEWEALASEQDRQSSALSLVGTTATL 127 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y +RI+ + + + +K EL ++ G S L + + E + S ++ L Sbjct: 128 YWQTAFINQRIASSLESIAYARKTQELVRAQYAAGGASALEVAEAEQTVASQQAAHALLV 187 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 + V+ ++ L P + Q+ P +P G+PA+L+ RPD+R E Sbjct: 188 QQRVEYVNALAILFDGPPDRVMADPQRL-----PQYPLPQAREGVPAELLGRRPDLRAAE 242 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIK 341 +L +S++ I A++ YP+L+L G++ + S N + L LP ++ Sbjct: 243 LRLRESLSNIDAARASFYPTLNLTGALGSSSPTLSNVLQNPVGTLTGALTLPFLQFNRLN 302 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 N++ + + E+ +++++ + A+ +VENAL++ + + +L +++ +++ L Sbjct: 303 LNLKVSRADFDERVVSFRQALYQAMADVENALSNRTQLRLQAEQLDASLKAAREAERLYE 362 Query: 402 INYRQGRYSLLDILDIE--RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + YR G SL LD + R TA++ D + R + + V +Y A+G Sbjct: 363 VRYRAGSVSLRFWLDAQEKRRTAEIARDENALNRLI--NQVKVYQALGG 409 >gi|323344435|ref|ZP_08084660.1| FusA/NodT family multidrug resistance protein [Prevotella oralis ATCC 33269] gi|323094562|gb|EFZ37138.1| FusA/NodT family multidrug resistance protein [Prevotella oralis ATCC 33269] Length = 477 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 123/482 (25%), Positives = 213/482 (44%), Gaps = 57/482 (11%) Query: 1 MNILRAIFSLFIVLLAGC-TVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTL 50 +NI+ I L ++L GC ++ +Y +P + ++G++ + N L Sbjct: 18 LNII--IAGLAALVLTGCKSLYGKYERPEVQTSGLVRDAMSAADTLAVGDTASFGN---L 72 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 W F D L L++ L N +L A + A+ + S + PS ++ I Sbjct: 73 PWRSVFTDPQLQVLIERGLNHNTNLLNAALNVQIAEAQLKSAKLAFLPS-FSFSPQGTIA 131 Query: 111 NLKTNSTGQ-----LDSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + N + +++ W +DLFG Q+R + +L L S QV + + N+I+ + Sbjct: 132 SWDGNKATKTYSLPINASWSVDLFGNLLSQKRAAQITL--LHSRDYQVAV-QTNLIANMA 188 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLK--FTQGATSKLSLVKLEAEIKSIESDI 219 Y ++ + + L K E+ ++ +G S ++ E+ S+ + Sbjct: 189 NMYYTLLMLDRQLELVSDMEILTKDTWEIMKVQKEAVRGVRST-AVQAAESNYYSVLTRK 247 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L + R + +S L+G + + + +S + NL + G+ L+ NR D+ Sbjct: 248 ADLNRQVRETENALSLLVGQQ-VQAIPRGKLESQSLPTNL----STGVGVQLLNNRADVH 302 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---W--SFGPKLYLPI 334 E LA + A+S YP+L+L+ S A T NS G T+ W S L PI Sbjct: 303 AAEMSLAQCFYNVETARSRFYPALNLSASGAFT--NSAGGMITNPGKWLLSAVGSLTQPI 360 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTK----LQ 387 F GK+ + ++ A++ ++ Y TWQ ++L A EV NAL N E KI K L+ Sbjct: 361 FQNGKLIAGLKVAKAQYEQAYNTWQNSILTAGSEVSNALVLYNTSDEKSKIEAKQIEVLK 420 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE K M+ + Y + + +L+ E +KV D S K Q + V+LY A+G Sbjct: 421 QNVEDTKALMASAGSTYLEVISAQQSLLNTE--LSKVSDDFS--KMQ---AVVNLYYALG 473 Query: 448 SG 449 G Sbjct: 474 GG 475 >gi|115351384|ref|YP_773223.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115281372|gb|ABI86889.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 543 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/419 (21%), Positives = 180/419 (42%), Gaps = 25/419 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N ++ QA R+ + E LS+ + Sbjct: 62 WWRAYRDPQLDAWIAAAQAGNPSLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P + N+TG L + +DL+G+ ++ E +L + A AKL + Sbjct: 122 PDNVYYGPGPLADTDTWNNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + E Sbjct: 182 EVNVVRAYVGMSMNYALLDLAHETFERQRALADLARKRLQAGIGTQLEVSQAESTLPDYE 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I T E++ ++ H ++ L G +++ S +P +PADL+ RP Sbjct: 242 RQIDTYEEAIQLARHQLAALAGK-GPGAGDAIKRPSLALDAPAGLPS--AMPADLLGRRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKLY 331 D+ + I +AK+ YP++ L G +T + N W+ GP L Sbjct: 299 DVVAARWTVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIF+ G++++ + A++ + + +TV+ A+K++ + + I +V Sbjct: 359 LPIFEGGRLRAQLGAADAGYDQAVERYNQTVVGALKDIADQVVRIRSLDTQKKDAARSVA 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 + +S LS +R+G +++L ++ + E I +LA ++ L A+G G Sbjct: 419 ANDRSYQLSREGFRRGLTDYVNVLIAQQQLLRAQETAARIDAERLA-AHAQLMAALGGG 476 >gi|330958501|gb|EGH58761.1| outer membrane protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 374 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/345 (22%), Positives = 153/345 (44%), Gaps = 29/345 (8%) Query: 122 SDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 S +++D+FG Q +E LA ++ + ++++I+++ ++ + + + Sbjct: 43 SSYELDVFGRIKNLQDEALEDYLALTETRRS----TQISLIAEVATGWLTLAADNQLLKL 98 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A L +++ +L+ G +S L + + + ++S D+ + + + L Sbjct: 99 AQDTLTSQQQSYDLTRRSHGLGGSSGLEVAQAQTTVESARGDVAQYRSQVLQDRNELRLL 158 Query: 237 LG-------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +G P E Q ++ + +P+ L++ RPD+ E L + Sbjct: 159 VGSEIPDELLPGAEMQAVAQ----------WVQVPAELPSSLLQRRPDVLSAEHSLKSAN 208 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 IG A++ +PS++L S + + F WSF P + +PIFD G ++ + Sbjct: 209 IDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPGISVPIFDGGSNRATLDS 268 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ + Q T+Q+T+ A KEV +AL + + V Q + +K L+ YR Sbjct: 269 AKIENKIQIATYQQTIQTAFKEVADALAVRSTLDERVAAQQAYTDASRKRYELADALYRG 328 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 329 GSQSYLEALESQRSLYAAEQDLISLRLTEQSNRVTLYKVMGGGWN 373 >gi|238026853|ref|YP_002911084.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237876047|gb|ACR28380.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 488 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/438 (22%), Positives = 192/438 (43%), Gaps = 25/438 (5%) Query: 21 GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATE 80 P +KP LP + +K+ + D WW++F D L++LV+ AL N + A Sbjct: 63 APGSSKP----LPAE---AEAKSGSDADIDPWWQAFGDPELSRLVERALAGNHDLKTAVA 115 Query: 81 RINAAKENILSVRADLFPSSYASI----SHRFIPNLKTNSTGQL--DSDWKIDLFGQRRH 134 + AA+ + RA+ P+ AS SH + L + + +DL+G Sbjct: 116 NLRAAQFAVDLARANQLPAISASAGLSNSHSLRGTQVASHAKSLLASASYVVDLWG---T 172 Query: 135 IESSL--ANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 + SS+ A + + D ++ V S + Y E+I + + ++ + L Sbjct: 173 LASSVDAARWEKQATEQDERTVEMAVASSVAGDYWLLALLTEQIEQSDASIRYGEQTLAL 232 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 ++ ++T GA + + L+ + S+ + L + ++ LLG P E Sbjct: 233 ANARYTSGAVAAVDLLAARRSLASLRASRYVLLAQQTQAENALAILLGQPPGEVFAVSSA 292 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 + P ++ G+PA ++ RPD++ E + ++A + ++ YPS +L GS Sbjct: 293 RLMTPLPA----VSPGVPASVLARRPDVKAAELRTRSTLANVDATRTSFYPSFTLTGSAG 348 Query: 311 LTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 D N + + P + +K+ + A+++ + + +T A+ +V Sbjct: 349 AASDALRDLLQNPLGTIAANVAAPFLNFRTMKARVGSAQTAYDAAAVAFAKTFYQALADV 408 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 ENAL + ++ + +T+ A+E ++S YR G L + LD ++AT + +L+ Sbjct: 409 ENALAARSDYQAEITQWADALEAARQSEQRIGWQYRAGSVPLQNWLDAQQATRDADAELA 468 Query: 430 IAKRQLAKSYVDLYIAIG 447 + + V LY+A+G Sbjct: 469 SVRYATLTNQVALYVALG 486 >gi|107025769|ref|YP_623280.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116693049|ref|YP_838582.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105895143|gb|ABF78307.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116651049|gb|ABK11689.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 459 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/360 (23%), Positives = 166/360 (46%), Gaps = 22/360 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASI 104 T WW SF D L+ L+ AL+ N + A R+ A+ V +L P + ++ Sbjct: 54 TGDWWRSFGDPQLDALIDDALRANNDLAIAAIRVYRAQLQAGLVDTNLTPNVTLGANGAV 113 Query: 105 SHRFIPNLKTNSTGQLDS-DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIP 162 S + + S+G S +++DL+G+ + +++ D+ ++ A+L++I Sbjct: 114 SRTLDTHQMSRSSGVNGSLSYELDLWGRLAALRDAAHWEADATADDLEAARLSLIGTTAA 173 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + +I++ + ++ + L + T GA S L L + E + + + L Sbjct: 174 LYWQIGYLNRQIALGDANIAYAERTLALVRSRHTAGAVSGLDLAQAEQSLAAQRAAQTQL 233 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + N H ++ L P + + P+ + G+PA L+ RPD+R E Sbjct: 234 IQQRTENRHALAILFDRPPQQRAAEPAALPDAAPPD----VAAGLPASLLGRRPDLRAAE 289 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKI 340 +L +S+A++ ++ YP+ +L GS A T S T+ + G L LP + Sbjct: 290 FRLRESLAQVDATRTSFYPTFTLTGS-AGTTSTSLERVLTNPVGTLGLGLALPFIQWNTM 348 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + IR ++S +E + +++ + A+ EVENAL++ ++Q E ++++SL+ Sbjct: 349 QLQIRVSKSQYEEAVVGFRQRLYTALAEVENALSA---------RVQLEREAEQRTLSLA 399 >gi|229521509|ref|ZP_04410928.1| hypothetical protein VIF_002046 [Vibrio cholerae TM 11079-80] gi|229341607|gb|EEO06610.1| hypothetical protein VIF_002046 [Vibrio cholerae TM 11079-80] Length = 484 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 101/442 (22%), Positives = 217/442 (49%), Gaps = 40/442 (9%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--------INIDTLKWWESFN 57 ++ S F+ L GC+V P+ H P L T ++ ++ + WW+ + Sbjct: 21 SLLSAFV--LTGCSV-PD----HYPDLATMREANELRSTNTFSHQAEMDWPSANWWQRYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK---ENILSVRA-DLFPSSYAS---ISHRF-- 108 D LN L++ ALQ + ++ A R+ A+ ++R+ DL ++ A+ +S R+ Sbjct: 74 DAQLNHLIEEALQHSPSLEVAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQS 133 Query: 109 -IPNLKTNSTGQL--DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P N G L + + D +G+ R + ++ + L +A A+ A+L + + + +Y Sbjct: 134 ATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAY 193 Query: 165 ID-ARHF--KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + AR + +E + +A Q+ + K +EL ++ G + S+ + +A S+E+++ Sbjct: 194 AELARLYANQETVYVALQVRN---KTVELLEKRYANGLETLGSVSQAKAVAASVEAELLG 250 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 +++S ++ + ++ L+G + +++ +P +G+ L+ +R DI Sbjct: 251 IQESIQLQKNALAALVG-QGPDLAASIEEPQITLTSRYGLPSKVGV--GLLGHRADITAA 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + A + ++ IA++ YP ++L+ G A D+ F N + GP +YLP+F G Sbjct: 308 RWRAAAAAQQVSIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGG 367 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++ + AE+ QE + T++ A+ EV + +TS + + K + AV+ ++++ Sbjct: 368 RLEGQLTSAEARYQEAVAQYNGTLVQALHEVADVVTSSQALQARINKTEQAVQQAEQALH 427 Query: 399 LSMINYRQGRYSLLDILDIERA 420 ++ Y+ G + LD+L E + Sbjct: 428 IATNRYQGGLTTYLDVLVAEES 449 >gi|295681461|ref|YP_003610035.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295441356|gb|ADG20524.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 517 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/426 (21%), Positives = 181/426 (42%), Gaps = 47/426 (11%) Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--------------KWWESFNDTSLNK 63 C+ GP P MP P + + + ++ L +WW F T+LN Sbjct: 47 CSFGPSGEPPAMPS-PAHYGV-EPQPAQTVEALGVAQRFTTGAQPVPQWWRLFGSTALND 104 Query: 64 LVKIALQQNLTILQATERINAAKENILS-VRADLFPS----SYASISHRF-IPNLKTNST 117 LV+ L+ + T+ A + + AA E + + + A L PS + AS IP +T Sbjct: 105 LVEEGLRNSPTLAAADKHLAAAHEQLRAQIGATLLPSVDLVAQASRGRDLGIPVPGAPNT 164 Query: 118 -------GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 G + + + DLFG R ++ A +D Q + A+ + + ++ + I+A Sbjct: 165 LLYNEFIGVVQAQYTFDLFGAVRKANAARSARVDIDAYQREAARRALATNIVTATIEAAM 224 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + I +++ L + + G+ ++ + I +++ + L + + Sbjct: 225 LRAEIDATERLIGLAGDQAHDTERHYQLGSLTRGDVSTARQSIAALQVSVADLRQRLTVT 284 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNL---YIPINIGI--PADLIRNRPDIRYQEKK 284 H ++ LLG + +P+L ++P ++ + P+DL+R RPDI E Sbjct: 285 RHALAVLLGR---------TPDAAPPEPDLTSLHLPQDLPVVLPSDLLRTRPDIAAAEAS 335 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + A +G+ + L+PSL+LN S+ N + G WS + +F G + Sbjct: 336 LKAAAADVGVTTAQLFPSLTLNASMGQGGFNWPLALSGAGAIWSIAATMSQALFHGGALV 395 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R A + + +++TVL A + V + L S+ D + + A +++ + Sbjct: 396 AQRRAAIDTYEAAVFEYKQTVLAAFENVADTLASLEHDAQALEAASGAARDARETFDDAA 455 Query: 402 INYRQG 407 +R G Sbjct: 456 SRHRLG 461 >gi|172060422|ref|YP_001808074.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171992939|gb|ACB63858.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 515 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/425 (21%), Positives = 183/425 (43%), Gaps = 37/425 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + Sbjct: 42 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 101 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P + N+TG L + +DL+G+ ++ E +L + A AKL + Sbjct: 102 PDNVYYGPGPLADTDTWNNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLEL 161 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + E Sbjct: 162 EVNVVRAYVGMSMNYALLDLAHETFERQRALADLARKRLQAGIGTQLEVSQAESTLPDYE 221 Query: 217 SDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----AD 270 I + E++ ++ H ++ L G A + + +P+L + G+P AD Sbjct: 222 RQIDSYEEAIQLARHQLAALAGKGPGAGDAIK---------RPSLALDAPAGLPSAMPAD 272 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWS 325 L+ RPD+ + I +AK+ YP++ L G +T + N W+ Sbjct: 273 LLGRRPDVVAARWTVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWT 332 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 GP L LPIF+ G++++ + A++ + + +TV+ A+K++ + + I Sbjct: 333 AGPALSLPIFEGGRLRAQLGAADAGYDQAVERYNQTVVGALKDIADQVVRIRSLDTQKKD 392 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYI 444 +V + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 393 AARSVAANDRSYQLSREGFRRGLTDYVNVLIAQQQLLRAQETAARIDAERLA-AHAQLMA 451 Query: 445 AIGSG 449 A+G G Sbjct: 452 ALGGG 456 >gi|330941980|gb|EGH44675.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 457 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 98/460 (21%), Positives = 207/460 (45%), Gaps = 36/460 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL+ C T P P P ++ + D ++WW+ F LN+L++ A + Sbjct: 11 CLLLSACQTPAPPLDSGIQP--PASWAFAENAAAQRSD-VRWWQQFGSPQLNRLIEQASR 67 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLK-----------TNS 116 + + A R+ A+ + + A L P + ++F+ N N Sbjct: 68 DSHEVAAAMARVRQAQASAIIGGAPLLPELAFDVRGERNKFVRNSDRKANPSDDNNTNNF 127 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T L + +++D +G +S+L L ++ +L +++ + Y +E+ Sbjct: 128 TSDLTASYEVDFWGGIAAGRDSALQGLRASQFDQATVELTLLANVADRYAQTLAAREQGR 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA L + + L ++ G+ + L L + + + + + ++P +++ + ++ Sbjct: 188 IAELNLTNAQDVLRLVQTRYESGSATALELAQQKNLVATQQRELPRVQQLANEQLITLAA 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P + LH + + + I G+P++L+ RPD+ E +LA + A + +A Sbjct: 248 LLGQP-VQNLHLADQPFDTLN---WPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVA 303 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++ + P L+L+ + + + + S L PIF+ G++ + +A + +E Sbjct: 304 RAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATARQEEL 363 Query: 355 YITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMIN--YRQGRYSL 411 T++ ++N+ +VE AL SI+ D++ + H EL + + + Y++G L Sbjct: 364 LETYRGAIINSFADVEKALNSIHGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAEDL 420 Query: 412 LDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L +L+ +R V V L +A+ Q + + LY A+G Sbjct: 421 LTVLETQRTLYLAQDVSVQLRLARLQ---ASIALYKALGG 457 >gi|294775263|ref|ZP_06740786.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] gi|294450840|gb|EFG19317.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Bacteroides vulgatus PC510] Length = 485 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 107/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I ++ W F DT L + Sbjct: 16 IIGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSMSWKTFFPDTLLQSYIA 73 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N + LQ ERI+ A+ + + L P I RF Sbjct: 74 EALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 133 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ D++G+ S+++ + + +A+ +IS+ Sbjct: 134 PDLEKDKHIPDPYRNFNLGLNFQWEADIWGKLTDKKRSAVSRWMQSVEAMRLARTLLISE 193 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 194 VGTHYFELIGLDKQRYVLREAILTARDAYNLTDEL----MKEGEVTRLSVDQFRSRRLKL 249 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 250 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 305 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 306 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 365 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + +TVL A +EV N +T+ ++ + + Sbjct: 366 APIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKEEESR 425 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 426 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 485 >gi|298208578|ref|YP_003716757.1| putative outer membrane lipoprotein [Croceibacter atlanticus HTCC2559] gi|83848501|gb|EAP86370.1| putative outer membrane lipoprotein [Croceibacter atlanticus HTCC2559] Length = 468 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 104/457 (22%), Positives = 208/457 (45%), Gaps = 27/457 (5%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LL C V +YT+P + F ++ I+ T+ + + F D L ++ L N Sbjct: 18 LLTSCFVAKDYTRPELSTTENLFRTDQLPQDSISAATVSYKDLFKDQYLVNYIEEGLSNN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS--SYASISHR-------FIPNLKTNSTGQLDSD 123 + I A ++I AA+ + +A P+ + A+++H+ F L ST Q + + Sbjct: 78 IDIRIALQQIVAAEAYVKQGKAGYLPTLGANATLTHQELSKNSQFGSFLSNTSTDQFEIN 137 Query: 124 ----WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 W+ D++G+ R + ++ AN A K +++++ +Y ++ + Sbjct: 138 ASLSWEADIWGKIRSNSRATQANYLQTVAAHQAVKTELVARIATAYYQLLALDAQLEVTK 197 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ ++ G +++++ + A + + ++ + LE + + +S LLG Sbjct: 198 ASIETRDNSVVTIKALKDAGQVTQVAVDQNVALLNNAKALVVDLEIAIFRTENTLSILLG 257 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 F + N+ + + IG+P L+RNRPD+ E L +S +AKS Sbjct: 258 KGPQNF---ERGTINDLE--FTTDLAIGVPTTLLRNRPDVMAAEYALIESFELTNVAKSM 312 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPSL+L + + +T+ F L PIF+K I++ A + ++ Sbjct: 313 YYPSLTLTATAGFQSLDLADLIDTNSLFANIIGGLTQPIFNKRAIRTQNEVAVAQQEQAL 372 Query: 356 ITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVEL-HKKSMSLSMINYRQGRYSLLD 413 + +++++L A +EV NAL N E +K +L L + ++ S ++N G + LD Sbjct: 373 LNFKQSLLIAGQEVSNALYGYNAETEKYEFRLIEIEALRNAETNSEELLN--NGFATYLD 430 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +L ++ E+++ +K Q +DLY A+G G+ Sbjct: 431 LLTARQSALSAELNVVDSKLQQQLYIIDLYEALGGGW 467 >gi|298486478|ref|ZP_07004538.1| Outer membrane pyoverdine eflux protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158955|gb|EFI00016.1| Outer membrane pyoverdine eflux protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 467 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/422 (21%), Positives = 192/422 (45%), Gaps = 32/422 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR 107 +WW+ F LN+L++ A + + + A R+ A+ + + A L P ++ Sbjct: 53 RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIGGAPLLPELAFDLRGERNK 112 Query: 108 FIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 F+ N N T L + +++D +G +S+L +L ++ +L Sbjct: 113 FVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQSLRASEFDQATVELT 172 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++ + Y +E+ IA L + + L ++ G+ + L L + + + + Sbjct: 173 LLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDSGSATALELAQQKNLVATQ 232 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + ++P +++ + +++ LLG P + + F + I G+P++L+ R Sbjct: 233 QRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFATLNWPDIGPGLPSELLTRR 288 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPI 334 PD+ E +LA + A + +A++ + P L+L+ + + + S L PI Sbjct: 289 PDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPI 348 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELH 393 F+ G++ + RA + +E T++ ++N+ +VE AL SI D++ + H EL Sbjct: 349 FNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSIQGLDQQ---RYWHEEELK 405 Query: 394 KK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + +++ Y +G LL +L+ +R V V L +A+ Q + + LY A+G Sbjct: 406 QAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRLARLQ---ASIALYKALGG 462 Query: 449 GY 450 G+ Sbjct: 463 GW 464 >gi|298385166|ref|ZP_06994725.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] gi|298262310|gb|EFI05175.1| multidrug resistance protein, FusA/NodT family [Bacteroides sp. 1_1_14] Length = 456 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 105/464 (22%), Positives = 201/464 (43%), Gaps = 37/464 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKP--HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 I S ++L+ C + +Y KP +P S + N L W E F D+ L L Sbjct: 7 ILSAATLVLSSCGIYNKY-KPVSEVPEGLYGSETVASADTANFGNLSWREVFTDSYLQNL 65 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSY----ASISHRFIPNLKTNSTGQL 120 + AL +N + A R+ A+ ++L+ + PS + ++S + + Sbjct: 66 IDSALVRNTDMQTAHLRVKEAEASLLTSKLSYLPSLFLAPEGAVSSFDRGKATQTYSLPV 125 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQV----DIAKLNVISKLIPSYIDARHFKERISI 176 + W++D+FG+ + ++ +AY Q K ++S + +Y + I Sbjct: 126 TASWELDIFGK---VTTAKRRAKAAYEQSKEYEQAVKTQLVSAVANTYYTLLMLDAQYEI 182 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + +K+++ + G ++ L + EA +I + + L++ ++++ L Sbjct: 183 SVSTEAAWKESVRTARAMKKAGMMTEAGLAQTEATYYNICTAVLDLKEQINQTENSMALL 242 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L E H +Q+ Q L ++GIP ++ NRPD+R E LA + A+ Sbjct: 243 LA----ETPHKIQRGKLENQ-QLPEDFSVGIPLQMLSNRPDVRSAELSLAQAFYTTNAAR 297 Query: 297 SDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + YPS++L+GS T+ PG + L P+F+KG + ++ A++ + Sbjct: 298 AAFYPSITLSGSAGWTNSAGSMIINPGKFVASALA-SLTQPLFNKGVNIAQLKIAKAQQE 356 Query: 353 EQYITWQETVLNAIKEVENALTSINEDK-------KIVTKLQHAVELHKKSMSLSMINYR 405 E +++++T+LNA EV AL + K +T LQ A +S SL M + Sbjct: 357 EARLSFEQTLLNAGVEVNEALVQYQTAREKSAFYDKQITSLQTAA----RSTSLLMEHSN 412 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y L++L ++ + + + + LY A+G G Sbjct: 413 NTTY--LEVLTAQQTLLNARLSQVANRFTEIQGVITLYQALGGG 454 >gi|238027758|ref|YP_002911989.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237876952|gb|ACR29285.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 508 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 97/464 (20%), Positives = 195/464 (42%), Gaps = 33/464 (7%) Query: 15 LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +AGC V P +K L +I + + + WW ++ D L+ + A Sbjct: 21 MAGCASIGRVAPRASKVEPSALDAGAAIRAANHDAGWPSADWWRAYGDPQLDAWIASAQA 80 Query: 71 QNLTILQATERINAAK--------------ENILSVRADLFPSSYASISHRFIPNLKTNS 116 N ++ A R+ A+ + LS++ +P Y + N+ Sbjct: 81 GNPSLAAAQARVRQAQAAAGIAHADTLPQLDGALSLQRKHWPDDYFYGPGTLADSNTWNN 140 Query: 117 TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKERI 174 +G L+ + +DL+G +H E +L + A A+L + + SYI+ AR+F + Sbjct: 141 SGTLNLSYHLDLWGGDKHNAERALDTARARAADERAARLELEVNVTRSYIELARNFA-LL 199 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +AHQ D + + L+ + G ++L + + EA + I +LE++ ++ H ++ Sbjct: 200 DLAHQAYDRQNELLTLARKRLRAGIGTQLEVSQAEAPLPDYARQIDSLEEAVQLGRHQLA 259 Query: 235 TLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L G A + L +LI RPD+ ++ I Sbjct: 260 ALAGKGPGAGDALTRPALSLAAPAALPSALPA-----ELIGRRPDVVAARWRVDAQAHGI 314 Query: 293 GIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +AK+ YP++ SL G + + N WS GP L LPIF+ G++++ + A Sbjct: 315 EVAKARFYPNVDLLASLGGFGVGAAFTSFLRSMNGGWSAGPALTLPIFEGGRLRAQLGAA 374 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + E + +T+++A+K + + + I +V L +++ LS +R+G Sbjct: 375 SAGYDEAVDHYNQTLVSALKGIADDVVRIRSLDTQREDAARSVSLARRAFDLSHQGFRRG 434 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++L + + + + + + + ++ L A+G G + Sbjct: 435 LTDYVNVLAAQSQLLRAQENRTRIEAERLAAHASLMAALGGGLD 478 >gi|270159462|ref|ZP_06188118.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|289165734|ref|YP_003455872.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269987801|gb|EEZ94056.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|288858907|emb|CBJ12830.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 456 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 105/464 (22%), Positives = 193/464 (41%), Gaps = 47/464 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +IF L I ++ GC E + PL S K + N+ WW+ F+D LN+L+ Sbjct: 6 SIFLLLIEIVTGCHRNVE-QQVSTPLKKFPSSTKAYKPVNNLPYTAWWKQFHDLELNQLI 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 + L+ N+ I A + A+ + ++ P+ + P L G W Sbjct: 65 ETGLKNNMDIHIAIGNVQQAQGELQQIKLSWIPTLKLFAGYSTNPALGI--PGAFYGVWP 122 Query: 126 ------IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 + L+ Q++ + NL A VD +L +I ++ +Y E++ + Q Sbjct: 123 YYVLNIMQLYTQQKQ---ATYNLQVYQAAVDGMRLALIGQITTAYFTLIAQMEQLRLLQQ 179 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLE-------AEIKSIESDIPTLEKSFRMNVHN 232 + + K I LS G +++ L +L+ A+IK I +I E + R ++ Sbjct: 180 LDNDLKSLIALSQQDIKIGLVNEIDLAQLQSDEQIIAAQIKPILHNIVFSENALRFLINE 239 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAK 291 I + K +NNF + G +PA ++ NRPD++ E L S K Sbjct: 240 IPGRV------------KNNNNFATLDFTRFKPGSLPATVLNNRPDMKMAEYALKASRIK 287 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRR 346 I +A S+ +P+L L+ G ++ H +T+ W+ P + N+ Sbjct: 288 ISVAYSNFFPALQLDDFLGEVSSPHSTFAQSVDTYVNWTIAP----------SVLGNVAA 337 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++ + + +++TV +KEV+ ++ + A E +++ L + Sbjct: 338 SKGAYHAKVAEFEKTVKRILKEVDTDYSANKRMNEQFVAYAQAEEDYRRKYKLQQGLLKT 397 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S D+L + + + + AK +LA S V LY + GY Sbjct: 398 GLISYKDLLQSKIYLDNLALTTNQAKLELAMSLVALYQDLAGGY 441 >gi|323190038|gb|EFZ75316.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli RN587/1] Length = 488 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ FND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQFNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTSVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|311105302|ref|YP_003978155.1| efflux transporter outer membrane factor lipoprotein 4 [Achromobacter xylosoxidans A8] gi|310759991|gb|ADP15440.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 4 [Achromobacter xylosoxidans A8] Length = 473 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/459 (20%), Positives = 208/459 (45%), Gaps = 37/459 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 +GC + ++P L + + S++ DT +WW+ + D LN L+ L N ++ Sbjct: 14 SGCALMESGSEPVATLDGAKLGL-TSQDTAWPDT-QWWQRYGDPQLNALLDEGLANNPSM 71 Query: 76 LQATERINAAKENILSVRADLFPSSYAS-------ISHRFI------PNLKTNSTGQLDS 122 A R+ A + RA L P A+ +S +I ++ +++ LD Sbjct: 72 SAAQARLAKANAAVGIARAPLLPRVDANYTLTREHLSKDYIYPAPLGGSVVSDNRLALDF 131 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS-KLIPSYIDARHFKERISIAHQIL 181 +++D +G+ R + + +A A A N+++ ++ +Y++ ++ + + +++L Sbjct: 132 SYELDFWGKNRSRLQAAVSQQAAAAADAQAARNLLAGAMVRAYLNLQNAFAQREVLNRVL 191 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + L+ ++T G +++ + + E+ + + + ++ + + + ++ L G Sbjct: 192 AQRAEVLSLTQGRYTAGLDTQVEVKQAESSLAAGKVELTQTDTTLAQLRNQVAALAGAG- 250 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKS 297 ++ + QP G+PA DL+ +RPD+ + + + I A++ Sbjct: 251 -------PQRGQSLQPVALTAPAGGVPANVPLDLLGHRPDVTAAKWRAEAARHAIDSARA 303 Query: 298 DLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + YP+++L G A+ N FGP + LPIF G++ +N+ + A Sbjct: 304 EFYPNVNLAAFVGFQAMGTGNLLGADARMAGFGPAVTLPIFHGGELNANLAGRRADADLA 363 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +TVL+A+ +V +AL + + + + A E + L++ YR G + + + Sbjct: 364 VSDYNQTVLDAVHQVADALDGLRLLDQEKAQQRQAREAIDAAYDLAVKRYRAGMGNYISV 423 Query: 415 LDIERAT---AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L + A+++ DL I QL S + A+G GY Sbjct: 424 LIAQTGVLTQARLDTDLRIRAYQLDASLAN---ALGGGY 459 >gi|293417584|ref|ZP_06660206.1| outer membrane efflux protein MdtP [Escherichia coli B185] gi|291430302|gb|EFF03300.1| outer membrane efflux protein MdtP [Escherichia coli B185] Length = 488 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 96/477 (20%), Positives = 206/477 (43%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K QG +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAQGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPQVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|206564025|ref|YP_002234788.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198040065|emb|CAR56046.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 459 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 83/357 (23%), Positives = 161/357 (45%), Gaps = 22/357 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW SF D L+ L+ AL+ N + A R+ A+ V +L P+ + Sbjct: 57 WWRSFGDPQLDALIDDALRANNDLAIAAIRVYRAQLQAGLVDTNLTPNVTLGANGAVSRT 116 Query: 112 LKTNSTGQLDS-----DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T Q ++IDL+G+ + +++ D+ A ++ A+L++I Y Sbjct: 117 LDTHRTSQSSGLNGSLSYEIDLWGRLAALRDAAHWEADATAADLEAARLSLIGTTAALYW 176 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +I++ + + + L + GA S L L + E + + + L + Sbjct: 177 QIGYLNRQIALGDANIAYAVRTLALVRSRHAAGAVSGLDLAQAEQSLAAQRAAQTQLIQQ 236 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 N H ++ L P + + P+ + G+PA L+ RPD+R E +L Sbjct: 237 RTENRHALAILFDRPPQQLAAEPAALPDAAPPD----VAAGLPASLLGRRPDLRAAEFRL 292 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSN 343 +S+A++ ++ YP+ +L GS A T S T+ + G L LP ++ Sbjct: 293 RESLAQVDATRTSFYPTFTLTGS-AGTTSTSLERVLTNPVGTLGLGLALPFIQWNTMQLQ 351 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 I+ ++S +E + +++ + A+ EVENAL++ ++Q E ++++SL+ Sbjct: 352 IKVSKSQYEEAVVGFRQRLYTALAEVENALSA---------RVQLEREAEQRALSLA 399 >gi|149921865|ref|ZP_01910310.1| hypothetical protein PPSIR1_18872 [Plesiocystis pacifica SIR-1] gi|149817318|gb|EDM76794.1| hypothetical protein PPSIR1_18872 [Plesiocystis pacifica SIR-1] Length = 472 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 98/475 (20%), Positives = 194/475 (40%), Gaps = 49/475 (10%) Query: 9 SLFIVLLAGCTVG-------PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +L +V L G + PE P PTQ + + +WW+ F D L Sbjct: 7 ALVVVALTGMAIAQPSLASSPEGPGEPQPDRPTQAEALR----LEQGSAQWWQGFEDAHL 62 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRF--- 108 + LV+ L QNL + A R+ ++ I RA L P AS+ +F Sbjct: 63 DALVEAGLSQNLDVRAAELRVAESEAAITQQRAPLLPRVSWDSTINLGPTASLGFQFGGL 122 Query: 109 ----------IPNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVI 157 P++ + L+ ++DL G+R + +S + +A A+ +++ + Sbjct: 123 PSGGDPNAEPPPDVYWTGSSVLNVSLELDLTGRRVLDLRASRDDRSAARAEHASSQVTIA 182 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + +Y D + R+ + + + + +EL+ + G L++ ++ S ++ Sbjct: 183 SSITQAYYDLVAARARLRVVDEQIATVEALVELTQQRLADGGARATDLLQQRQQLASTQT 242 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 P + R ++ LL P T Q +S + P L + + RP Sbjct: 243 LRPQAQAQVRAFSQQLAVLLAESPDT------QHESADALPELLLAAGAEDAELALDRRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFGPKLYL 332 D+ E ++ + + +A+ + PSLS++ + + +F +W G L + Sbjct: 297 DMVAAEHRVRAAERREKVARREFAPSLSVSANAGI---QAFAISEVSDQWYWGAGASLSV 353 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF G+ +R+ E+ L A ++V +A + E IV +E+ Sbjct: 354 PIFAGGQRIGALRQREAQTASSRNEVARVRLEAQRQVADARAAQGERLAIVEASLAELEV 413 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +++ Y +G +L++L + + E++L A+R L +++DL A+ Sbjct: 414 AEQTYLALRERYFEGDADVLNLLSALTSRQQAELNLITARRDLITAHIDLQRALA 468 >gi|331650108|ref|ZP_08351181.1| multidrug resistance outer membrane protein MdtP [Escherichia coli M605] gi|330908419|gb|EGH36938.1| outer membrane component of tripartite multidrug resistance system [Escherichia coli AA86] gi|331041053|gb|EGI13210.1| multidrug resistance outer membrane protein MdtP [Escherichia coli M605] Length = 488 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ FND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQFNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|167565433|ref|ZP_02358349.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 574 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 104/480 (21%), Positives = 201/480 (41%), Gaps = 42/480 (8%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS----------KNLINIDTL 50 M +L +L I A C++ P Y +P P+ P+ + G + ++ L Sbjct: 1 MRVLPVALALGI---AACSMEPTYKRPDAPI-PSAYPSGPAYSAPGGPATPQSGPAAPDL 56 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHR 107 W F D L +L+ AL N + AT I+ A+ RA FP+ A+ S R Sbjct: 57 GWRNFFVDAQLQQLIARALANNRDLRIATLNIDEARALYRIRRAAQFPAIDANAGLTSER 116 Query: 108 FIPNLKTNSTGQLD---------SDWKIDLFGQRRHI-----ESSLANLDSAYAQVDIAK 153 P L+ L +++++D+FG+ R + E LA + A V I Sbjct: 117 LSPALRAPGQSALINTYAASVGLTNFELDVFGRVRSLSHAAQEQYLAT-EEARRSVHI-- 173 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 ++++++ +Y+ + + +A L + E+ H GA ++L + + +++ Sbjct: 174 -SLVAEVANTYLTLLADRALLKLAQDTLKSQQDAAEMIHRGKQAGAMAQLDEHRADTQVQ 232 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + + + + + + L G P + N L +P+ L+ Sbjct: 233 TAQVAVEQFTRQVAQDENALILLTGGPLPSGVSSAAPLDNQ---TLLAEFPADLPSTLLE 289 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKL 330 RPDI E +L + A IG A++ +P ++L G++ + + F G W F P+L Sbjct: 290 RRPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVASASLAGLFSG-GVAWLFAPQL 348 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G ++N+ A ++ T+ A +EV +++ + ++ + + Sbjct: 349 TLPIFNAGSNQANLDLATVRRDINVANYERTIQGAFREVSDSMAARGTYEREAKAQETMI 408 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 409 RDLSETKRLAEMRFRNGVDDYFGVFDAQRQLFTAQQSLVTYKLAGLTSRVTLYKALGGGW 468 >gi|288550100|ref|ZP_05969277.2| outer membrane efflux family protein [Enterobacter cancerogenus ATCC 35316] gi|288316736|gb|EFC55674.1| outer membrane efflux family protein [Enterobacter cancerogenus ATCC 35316] Length = 456 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 98/444 (22%), Positives = 207/444 (46%), Gaps = 29/444 (6%) Query: 1 MNILRAIFSLFIVLL-AGC--TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFN 57 M IL + VLL AGC ++ +Y P + + ++ + D W++FN Sbjct: 1 MKILSPLTVCLAVLLSAGCADSLKSDYQPPEVKYPANWYQADAAEERMPFD----WQAFN 56 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAK--ENILSVRADLFPSSYASISH------RFI 109 D L+ ++ + +N + +A R+ A+ E + + D P S++ Sbjct: 57 DPDLDGWLRQVMVRNNDVARAVLRVYRARLDEERIGIAND--PGLKGSLALDGKKQLNSS 114 Query: 110 PNLKTNSTGQLDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 N S +++ +++DL+G+ R+ + A S + A+L ++S +Y Sbjct: 115 ANWSRGSVASINTSYELDLWGKIARQRDAKAWARFASE-EDLRSARLTLLSNASNNYWRL 173 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +++S+ Q +D K+ + L++ ++ G S L +V + + S E+ + L+ Sbjct: 174 GFINQKLSVLQQSIDYAKETLRLANARYAAGGASSLDVVDAQQGVLSQENRLAALKNERL 233 Query: 228 MNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 ++ + LLG P + + P +P ++ IP +++R+RPDI +E ++ Sbjct: 234 QALNQQAVLLGTAPGSAIVE------PKALPMGPLPQVSGKIPVNVLRHRPDISAKEWRV 287 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNI 344 +++A + + ++ YP+ SL GS+ + + N S G L LP + + ++ Sbjct: 288 REALATVDVQRTAFYPAFSLTGSLGTSSSSLMAFLENPVGSVGANLTLPFLEWRERGVDV 347 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + A + +++ + +++ + A+ VE+AL ++ + T L+ +EL KKS L+ + Y Sbjct: 348 KIARNDYEQRVLEFKQELYKAMSSVEDALALRHQLLEQETLLREGLELAKKSERLNEVRY 407 Query: 405 RQGRYSLLDILDIERATAKVEVDL 428 RQG + LD + + E+ L Sbjct: 408 RQGAVRISFWLDAQEKRRQAELAL 431 >gi|330869815|gb|EGH04524.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 462 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 197/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D +WW+ F LN+L++ A + + + A R+ A+ + + Sbjct: 31 PARWAFAQSAAAQRSDA-RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALQSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLKTQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|257454158|ref|ZP_05619430.1| RND efflux system, outer membrane lipoprotein, NodT family [Enhydrobacter aerosaccus SK60] gi|257448445|gb|EEV23416.1| RND efflux system, outer membrane lipoprotein, NodT family [Enhydrobacter aerosaccus SK60] Length = 493 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 115/502 (22%), Positives = 221/502 (44%), Gaps = 77/502 (15%) Query: 3 ILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFS----IGNSKNLINIDTLKWWESFN 57 IL I + F L GC P ++ + ++P +F+ +G N+ WW++F+ Sbjct: 15 ILAGILTTAFTASLTGCQNTPVKSQSQV-VMPQKFNYVLPVGEQSNIST-----WWQNFH 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASIS------HRFI 109 D L L++ ALQ I +A RI+ A N+ + + + SI+ + Sbjct: 69 DPVLTSLIEHALQTAPDIREAKARIDEASAVANLANANKGIMVGAGGSITGVNSDVDNPL 128 Query: 110 PNLKTNSTGQLDSDW---KIDLFGQRRHIE-----------SSLANLDSA-YA------Q 148 P+ G L SDW +D+ G H+ ++ D+A YA + Sbjct: 129 PSKVRKPLGMLGSDWGDSSLDVDGHAYHLGILASWEPDFFGKKQSDADAAGYAYLATQEK 188 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + A + V +K+ +Y AR ++ I Q + + +F G ++ + + Sbjct: 189 IHGAHMLVAAKIAQAYFQARSKEQEALILKQTQSSLSELRRYAKARFDLGQATRYDIDDI 248 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--- 265 + +++ I++ L + N+ I+ L G + +F + P+ P+N+ Sbjct: 249 DIKLQGIKAKQDNLSAERQANIRQIAVLSGKTSQDF---------DLPPS---PVNVLKH 296 Query: 266 -------GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL-----SLNGSIALTH 313 P+DL+ RPDIR ++ ++ A G A +D YP +LNG +++++ Sbjct: 297 LPPAPQGYYPSDLLTRRPDIRAKQAQVNALAALHGSAVADQYPRFGINFGALNGGLSISN 356 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 ++ T + +P+F G+IK NI A++ Q + +T+L A+ EV+N+ Sbjct: 357 NDLDSTGITAGLINANVSVPLFTNGRIKHNIEAADARVQAVMADYDKTLLTALAEVDNSS 416 Query: 374 TSINEDKKIVTKLQHAV---ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 + LQ+AV EL + + + NY GR + D + R TA+ E + ++ Sbjct: 417 QLNTALIRQHRNLQNAVKDAEL-QADHAKKLFNY--GRLT-FDDMPKARITAQ-EYEQNL 471 Query: 431 AKRQLAKS--YVDLYIAIGSGY 450 + +L ++ + LY ++G G+ Sbjct: 472 IQNELGQALNLIALYNSLGGGW 493 >gi|21242883|ref|NP_642465.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108376|gb|AAM37001.1| outer membrane efflux protein [Xanthomonas axonopodis pv. citri str. 306] Length = 494 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 104/462 (22%), Positives = 187/462 (40%), Gaps = 38/462 (8%) Query: 21 GPEYTKPHMPL--------LPTQFSI-----GNSKNLINIDTL--KWWESFNDTSLNKLV 65 GP++ +P P LP + G ++ L WW +F LN +V Sbjct: 23 GPDFQRPAAPAADRYTANALPVTTAAADVAHGGAQEFEPGQELPAAWWRAFGSPQLNAVV 82 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFIPNLKTNS-- 116 + AL+ N + A + A++ + + R P +S S P+ ++ Sbjct: 83 ERALRANPDLQAADAALRQAQQTLAAQRGAWRPQADLRVDASRQRDSVVPAPDAGIDTPY 142 Query: 117 ---TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T QL + +D+FG RR +E++ A + Q D A L++ + ++ + I + Sbjct: 143 ALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAAIGEAAVRA 202 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ A + + K+ L+ + GA ++ + ++ +P LEK Sbjct: 203 QLDAARAQVAIAKQLCTLTARQQALGALGAAQVLAQRTALAQAQAAVPALEKQLEQQ--- 259 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR--NRPDIRYQEKKLADSVA 290 TLL + ++ L +P + + RPDIR E + + A Sbjct: 260 -RTLLAILGGQLPGDAAGEAFTLD-TLQLPAQLPLSLPSRLLDRRPDIRAAEAQAHAASA 317 Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 IG+A + PS+SL+ + + F NT WS L P+F G + R A Sbjct: 318 LIGVAAAARLPSISLSAASGGSASGVGRMFAAGNTQWSVAGGLLQPLFHGGALAHQQRAA 377 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+ + ++ VLNA EV NALT++ D + + A L +++++L G Sbjct: 378 EAGYTQAMAQYRSVVLNAFGEVSNALTALQSDAQSLHACADAQALAERTLALVRRQQAVG 437 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + D+L ++A + A+ V LY A+G G Sbjct: 438 AVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGG 479 >gi|254446737|ref|ZP_05060212.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198256162|gb|EDY80471.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 480 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 113/482 (23%), Positives = 201/482 (41%), Gaps = 54/482 (11%) Query: 4 LRAIFSLFIVLLAGCT------VGPEYTKPHMPLLPTQFSIGN---SKNLINIDTLKWWE 54 ++AI L + GC + E + LP+Q S S+ D+ WWE Sbjct: 13 IKAIAPLICITFVGCVSRRGQDLASEIQRNQDLELPSQASAEANLPSEQFAASDSHFWWE 72 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-------- 106 + D +LN L++IA +Q+ I R+ A + S RA L PS S+ Sbjct: 73 ALEDETLNSLIRIAHEQSWDIRIGATRLQEALSGLRSSRAALLPSVDLSLEETVNEFDVD 132 Query: 107 ---------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQV-------D 150 RF +L N+ W+ID+FGQ R A D+ Y D Sbjct: 133 SNEFQRETLRFTTDLNLNAV------WQIDVFGQARA-----ALKDTKYEVAANEELLRD 181 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + ++ V S++ +Y+ R + +IS+A Q N+ +G + L + E+ Sbjct: 182 LKRI-VTSQVATTYLQLRSTQAQISLAEQSEARRADNLGRIDSLLEKGYATALDFSRTES 240 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ + + L+ + + +S LLG E + P P ++ Sbjct: 241 QLYQSRATLAGLKANEVQLTNQLSILLGISLVEVRSLIPSGPLVQPPQKTPPPSV---EQ 297 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFPGYN--THWSF 326 LI NRPDIR E +L ++ AK+ PSLSL+ I + + P T Sbjct: 298 LIYNRPDIRATEHRLYSGAYRLNAAKASRLPSLSLSSQIGSSASETGQLPSLERITANMI 357 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G L P+ +G+I + I + Q Y+ ++ + NA+ E+++AL S+++ +I+ Sbjct: 358 G-SLVTPLLGRGRILAAIDLQSAQLQAAYLNYERGIANALAEIDSALFSLSQSHEILRLR 416 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 +++ LS + G ++ E+ + E + A+R +YV+ Y+++ Sbjct: 417 TLESNSARRAAELSHRLFLAGELDYTSVIVAEQTRSNAESNAIAAQRDALTAYVN-YVSV 475 Query: 447 GS 448 S Sbjct: 476 VS 477 >gi|312961744|ref|ZP_07776242.1| RND efflux system, outer membrane lipoprotein [Pseudomonas fluorescens WH6] gi|311284003|gb|EFQ62586.1| RND efflux system, outer membrane lipoprotein [Pseudomonas fluorescens WH6] Length = 483 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 104/478 (21%), Positives = 203/478 (42%), Gaps = 36/478 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWES 55 MN L + LAGC L G S + + + WW+S Sbjct: 1 MNTRALCLVLAAMSLAGCANYSGLDTQGQRLDANTLQTGKSLSGVALSPAAWPAADWWKS 60 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLK 113 D L+ L++ ALQ + + A R + A+ + A P+ + A +S + Sbjct: 61 LGDPQLDGLIREALQTSPDMQVADARAHQAQAAAYAANAARMPTLDASAGVSRSRLAR-D 119 Query: 114 TNSTGQLDS-----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + G+ D+ ++ DL+G QR E++L +A A+L + + + Sbjct: 120 QDPRGEGDAYSTVRNISASFNYTFDLWGGQRATWEAALGQARAAEVDQQAARLTLAADVA 179 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y D +A L ++ ++LS + G S + E+ S +S + Sbjct: 180 KAYSDLGQAHIVRDLAADDLKRTRQMLDLSKRRLDSGIDSHYQYQQTESLEASSQSQLID 239 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPD 277 EK + ++ LLG + + +PN+ P + +P A+L+ RPD Sbjct: 240 AEKQLQSARIALAVLLG-------KGPDRGNELARPNVLRPAAVAVPSVLPAELLGRRPD 292 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPI 334 + ++ + I +K+ YP+L+L+ G+ +L D F + ++ P + LPI Sbjct: 293 LIAARWRVEAASKDIAASKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTVSLPI 352 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G++++++ ++ + +T++ A+ ++ + L+ + E + + QHA ++ + Sbjct: 353 FDGGRLRADLDARDADYDLAVAQYNKTLVQALGDIGDTLSQLRETGRQIQAQQHATDIAQ 412 Query: 395 KSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +S + Y G S LD+L IE + S+ Q+ S + L A+G G+N Sbjct: 413 QSYDTVVQRYGSGIGSYLDVLSIEQQLLQAQRQLASLNAGQITLS-IQLMQALGGGFN 469 >gi|331665755|ref|ZP_08366649.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA143] gi|331056806|gb|EGI28800.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA143] Length = 488 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L N +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLANSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|160873956|ref|YP_001553272.1| RND efflux system outer membrane lipoprotein [Shewanella baltica OS195] gi|160859478|gb|ABX48012.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS195] gi|315266189|gb|ADT93042.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS678] Length = 483 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 96/462 (20%), Positives = 202/462 (43%), Gaps = 30/462 (6%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LL+GC + ++ P + + P Q+ + +D WW+ F+ L+KLV Sbjct: 21 MALGITLLSGCGSFMRSDFEPPALAI-PEQWQNTTVNEQVKVD--PWWQQFHQPELDKLV 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-----GQL 120 L N + AT + A+ R DL+P A++ L L Sbjct: 78 SQVLSTNNDLTLATLTLRKARLQAGLTRDDLYPQLSANLGTSHNQPLDGGDATKSYQANL 137 Query: 121 DSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAK------LNVISKLIPSYIDARHFKER 173 +++DL+G+ AN+D A +A + A+ ++++ Y + +R Sbjct: 138 SVSYEVDLWGKVS------ANIDQAQWAALASAEDRESTTQSLVATTASLYWQIGYLNQR 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + + K+ + L+ ++ GA +++++++ + + E+ L + + + + Sbjct: 192 VDLSQKSIAYSKQTLALTQRQYDSGAVTQVNVLEAQRSMAGQEAAHSQLIQQLTVAKNAL 251 Query: 234 STLLGY-PATEFLHYMQKQSNNFQ----PNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 + LL PA + + + P++ +P +++G+PADL+ RPD++ +L Sbjct: 252 AILLNQAPAADSAQSLASGETWVEIKQLPDVAVPDVSVGVPADLLVRRPDVKASLYQLRS 311 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++A + +PSLSL G I T + N S G L LP +++ N Sbjct: 312 ALASKDATYASYFPSLSLTGGIGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDI 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q + +++T+ +A ++V+NA+++ + + KL+ ++ YR Sbjct: 372 ADIDYQTAVVNYRKTLYSAFEDVDNAISAKQQYRYQGEKLEQQFSAAAAVEAIYESQYRN 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G + + +D + E L + + LY A+G Sbjct: 432 GAIGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALGG 473 >gi|330888112|gb|EGH20773.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 462 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 197/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D +WW+ F LN+L++ A + + + A R+ A+ + + Sbjct: 31 PARWAFAQSAAAQRSDA-RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLSASYEVDFWGGIAAGRNS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALQSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSTRLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L+ +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|194365074|ref|YP_002027684.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194347878|gb|ACF51001.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 479 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 103/422 (24%), Positives = 183/422 (43%), Gaps = 33/422 (7%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 I DT WW F D L++LV AL N + A + ++ L+P +S Sbjct: 70 IRQDT--WWTGFGDERLDRLVAQALAANSDLAAAGLAVQRSRLQAGLASNALWPQPSSSG 127 Query: 105 SHRFIPNL--------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKL 154 ++ STG + W++DL+G R + +A ++ ++ D L Sbjct: 128 VSGSASRATDQADDWRRSYSTG-VSLGWEVDLWG-RLRTQRDIARWEAEASEEDRQNTAL 185 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 VI I Y + + I+ L+ ++ EL +F GA S+L + + ++S Sbjct: 186 LVIGDSITQYWTLAYLNQSIATGQANLERLERTRELVQARFDAGAVSRLEVRQALQNLQS 245 Query: 215 IESDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + LE+ R+ V N T+L G P + Q + + I G+P DL+ Sbjct: 246 QRASQSALEQQ-RVEVRNALTVLLDGTPWPQ-----QDEPQDLLGARSPSIAEGLPTDLL 299 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKL 330 RPD+R E +L +S+ I + + YP+LSL GS+ + S N + G L Sbjct: 300 GRRPDLRAAELRLRNSLKTIKVTATQYYPALSLTGSLG-SSATSLGDVLRNPVATLGAGL 358 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ--- 387 LP + + + + A ++ Q +++T+ A+ EV+NAL++ + + V Q Sbjct: 359 SLPFLNLQRAQLDTDIAGTAYQIAATNFRKTLYTALSEVDNALSAREQLVRQVAASQASY 418 Query: 388 -HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AVE+ + + YR G L L+ ++ E+ L+ ++ + V L+ A+ Sbjct: 419 DEAVEVERA----QEVRYRVGATDLRTWLEAQQTRRDAELSLARVRQGQLNNDVTLFKAL 474 Query: 447 GS 448 G Sbjct: 475 GG 476 >gi|330899568|gb|EGH30987.1| outer membrane efflux protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 498 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/483 (19%), Positives = 215/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ + H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTHGITPQGSVLHADSLATDQAIQSASIDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDAQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQV----QGNASLMRHD 120 Query: 109 IPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + + + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAQTPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 HRQIDALQEAIALSRNQLAALAGKGPGQGAG-VQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRASAAYDQAVAHYNQTLVMALKNVSDQLMWRASMDKQQALAAE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|206559823|ref|YP_002230587.1| putative fusaric acid resistance outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198035864|emb|CAR51755.1| putative fusaric acid resistance outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 521 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 99/469 (21%), Positives = 201/469 (42%), Gaps = 43/469 (9%) Query: 13 VLLAGC-TVG---PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +++AGC ++G P+ T+ L +I + WW ++ D L+ + A Sbjct: 19 LIMAGCASMGDNKPQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAA 78 Query: 69 LQQNLTIL---------QATERINAAKE-----NILSVRADLFPSSYASISHRFIPNLKT 114 N T+ QA R+ + E LS+ +P + + N T Sbjct: 79 QAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNV-YYGPGPLANADT 137 Query: 115 -NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 N+TG L + +DL+G+ ++ E +L + A AKL + ++ +Y+ Sbjct: 138 WNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYA 197 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + +AH+ + + +L+ + G ++L + + E+ + E I + E++ ++ H Sbjct: 198 LLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQ 257 Query: 233 ISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLA 286 ++ L G A + + +P L + G+P ADL+ RPD+ + Sbjct: 258 LAALAGKGPGAGDAIK---------RPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVD 308 Query: 287 DSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 I +AK+ YP++ L G +T + N W+ GP L LPIF+ G+++ Sbjct: 309 AQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLR 368 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A + + + +T++ A+K++ + + I +V + +S LS Sbjct: 369 AQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANNRSYQLSR 428 Query: 402 INYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYIAIGSG 449 +R+G +++L ++ + E I +LA ++ L A+G G Sbjct: 429 EGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-AHAQLMAALGGG 476 >gi|229591310|ref|YP_002873429.1| hypothetical protein PFLU3877 [Pseudomonas fluorescens SBW25] gi|229363176|emb|CAY50225.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 483 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 105/495 (21%), Positives = 211/495 (42%), Gaps = 70/495 (14%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--------- 51 MN +L + +AGC Y+ L TQ ++ L + TL Sbjct: 1 MNTRALCLALVAMSMAGCA---NYSG-----LDTQGKRLDASTLQSGKTLSGATLSSAAW 52 Query: 52 ----WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASIS 105 WW+S D L+ L++ ALQ + + A+ R + A+ + A+ P+ + A +S Sbjct: 53 PSADWWKSLGDPQLDGLIQEALQNSPDMQVASARAHQAEAAAYAANAERMPTLDASAGVS 112 Query: 106 HRFIPNLKTNSTGQLDS-----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAK 153 + + G+ D+ ++ DL+G QR E++L +A A+ Sbjct: 113 RSRLAK-DQDPRGEGDAYSTVRNIGASFNYNFDLWGGQRAAWEAALGEARAAQVDQQAAR 171 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L + + + +Y D +A+ L ++ ++L + G S+ + E+ Sbjct: 172 LTLAANVAKAYSDLGQAHIVRDLANDDLKRTRQMLDLGKRRLNSGIDSQYQYQQTESLEA 231 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 S +S + EK + ++ LLG + S +P + P + +P A Sbjct: 232 SAQSQLIDAEKQLQSAKIALAVLLG-------KGPDRGSELARPAVLKPSAVAVPSVLPA 284 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSF 326 +L+ RPD+ ++ + I +K+ YP+L+L+ G+ +L D F + ++ Sbjct: 285 ELLGRRPDLIAARWRVEAAGKNIDASKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNI 344 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P + LPIFD G++++++ ++ + +T++ A+ ++ N L+ + + + + Sbjct: 345 APTVSLPIFDGGRLRADLDARDADYDLAVAQYNKTLVQALGDIGNTLSQLRDTGRQIQAQ 404 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA----------KVEVDLSIAKRQLA 436 +HA ++ ++S + Y G + LD+L IE+ ++DLSI Sbjct: 405 RHAADIAQQSYDTGVQRYSSGIGNYLDVLSIEQQLLQAQRQLATLNAAQIDLSI------ 458 Query: 437 KSYVDLYIAIGSGYN 451 L A+G GY+ Sbjct: 459 ----QLMQALGGGYS 469 >gi|198274243|ref|ZP_03206775.1| hypothetical protein BACPLE_00383 [Bacteroides plebeius DSM 17135] gi|198272918|gb|EDY97187.1| hypothetical protein BACPLE_00383 [Bacteroides plebeius DSM 17135] Length = 483 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 108/494 (21%), Positives = 210/494 (42%), Gaps = 65/494 (13%) Query: 2 NILRAIFSLFIVLL--AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 N LR ++ +V+L +GC P LP F +G + + +++ +L W E F DT Sbjct: 7 NSLRNYIAIAVVILLSSGCK-SPSLLSEEKVALPETF-VGGTSDTLSMASLSWKEFFPDT 64 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------- 108 L + AL +N + LQ ER++ A+E + R L P +S RF Sbjct: 65 YLKAYIDTALVRNHSFLQTLERVSLAREQLRVGRGALLPEVSLGLSAGVQRFGEYTMDGV 124 Query: 109 ---------------IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLA-----NLDSAYAQ 148 IP+ N + W+ D++G+ + + A +L++A Sbjct: 125 GNSTTNTPDLAKDKHIPDPYKNLNLGVSFQWEADVWGKLTDKKRAAAFRWMNSLEAA--- 181 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 +A+ ++S++ Y ++ I + + ++ EL++ +G S+LS+ + Sbjct: 182 -RLAQAMLVSEVASQYYHLVGLDKKCVILKEEIQKAQEAYELTNELMKEGEVSRLSVDQF 240 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 ++ +E + + ++ LLG E ++ + Q P GIP Sbjct: 241 QSRGLKLEEMLLDTRQQITEAERALALLLGKLPFEIKRSTFEEISESQ----FPAASGIP 296 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP 328 A L+ NRPD++ E +L A A+ +PSL + G N+F + W P Sbjct: 297 AQLLCNRPDVKAAELELLACKADASAARKTFFPSLLIGGGAGF---NAFD--LSKWFVSP 351 Query: 329 K---------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-TSINE 378 + P+F + +I++ +++ + + + L + +EV + L S Sbjct: 352 ASLVYDLAAGISAPLFKRHEIRALWNESKARQRMALLEYHRVALKSYQEVADLLEASERM 411 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQL 435 D++ + K + + +H++S+ + +R G LD+L + E +DL++A QL Sbjct: 412 DERKLLKAKES-RVHRRSIENANELFRTGFVGYLDVLSADERYLDCELERIDLNVAYCQL 470 Query: 436 AKSYVDLYIAIGSG 449 + LY ++G G Sbjct: 471 ---HTLLYRSLGGG 481 >gi|330938867|gb|EGH42385.1| outer membrane efflux protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 498 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/483 (19%), Positives = 215/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ + H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTHGITPQGSVLHADSLATDQAIQSASLDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDAQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQV----QGNASLMRHD 120 Query: 109 IPNLKTNSTGQLDSD------------WKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTRTWDNNASLGLTYALDLWGRERNASEQAVDLAHVSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + + + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAQTPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 RRQIDALQEAIALSRNQLAALAGKGPGQGA-ALQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRASAAYDQAVAHYNQTLVMALKNVSDQLIRRASMDKQQALAAE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|325519033|gb|EGC98538.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 304 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 132/288 (45%), Gaps = 12/288 (4%) Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +I++ Q++D + + + + G S+ + + ++ +P L Sbjct: 15 LARQIALTRQLIDAQAQQLRIVEARAAAGGVSQADVHAQRTLLAQTQAALPPLAARLAQA 74 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLAD 287 H ++ LLG P E + N L +P + + +P+ L R RPDIR E L Sbjct: 75 DHRLAILLGTPPAE----AELPDLNLDA-LALPRTLPVTLPSTLARERPDIRAAEALLHQ 129 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A +G+A ++LYP S++ + + G N W+ G L P+F G++++ Sbjct: 130 ASANVGVATANLYPRFSISAGLGSERTRIADIVSGLNI-WNVGLGLTQPLFHGGELRAKK 188 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 R A+++ + ++++TVL A+++V +A+ ++ D + A + +++ Y Sbjct: 189 RAAQATYDAAFASYRDTVLQALQQVADAMRAVEHDAAELQATDIAAQEASARRAIAGDRY 248 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI-GSGYN 451 G S ++LD +R + +D + A+ L+ A+ G+G + Sbjct: 249 ASGGISTFELLDTQRQVLQTSLDRTRAQADRLTDTAALFQALAGNGID 296 >gi|294626550|ref|ZP_06705148.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599117|gb|EFF43256.1| outer membrane efflux protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 405 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/337 (22%), Positives = 154/337 (45%), Gaps = 7/337 (2%) Query: 120 LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD + IDL+G +R E+++ +A A+LN+ S + Y + +A+ Sbjct: 54 LDFRYGIDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSSAIAEGYAQLAYAWSLHDLAN 113 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L +K +EL+ + + G S+L + + +A + + + + + ++ ++ L+G Sbjct: 114 DELSRAQKTLELTRQRRSAGIDSELQVRQAQARVPAAQQQLQSAQQQIDEARTALAALVG 173 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 L + F L + +PADL+ RPD+ ++ + I +AK+ Sbjct: 174 QGPDRGLDIARP---VFGAGLATQLPSMLPADLLGRRPDVVAARWRVEAADKDIAVAKTR 230 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPIFDKGKIKSNIRRAESSAQEQY 355 YPSL+L + + + + G P L LPIFD GK+++N+ +++ Sbjct: 231 FYPSLNLTALGGVINPDVGKLLESGSVLGLVAPALSLPIFDGGKLRANLAGSDAQYDLAV 290 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + + V++A++EV + +T++ ++ AV+ + L+ YR G S LD+L Sbjct: 291 ANYNQKVISALREVADQVTAVRSLEQRAQAQNDAVQTATAAFDLAQQRYRAGIGSYLDVL 350 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++ L+ + Q + V L A+G G+ P Sbjct: 351 SVQEQLLVARQRLAGLQSQQLLASVRLQRALGGGFTP 387 >gi|241766024|ref|ZP_04763944.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] gi|241363996|gb|EER59259.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidovorax delafieldii 2AN] Length = 356 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 154/307 (50%), Gaps = 17/307 (5%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L++ W++DL+G+ ++++ A+ +++ A + +L+V + + +Y R + + + Sbjct: 22 LNASWEVDLWGRIAGTVDAARASAEASAADLAAMRLSVQAAVAQTYFSLRAAESQARLLR 81 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y ++ L+ + G S + + EA+ KS + + E S H ++ L+G Sbjct: 82 ETLQAYDRSWALTRNRQKAGVASAADVAQAEAQYKSTQVQLLEAETSRTQLEHALAALVG 141 Query: 239 YPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 F S L P + +P+ L+ RPDI E+++A + A+IG+A+ Sbjct: 142 QAPAAF-------SLPVTAMLPAPPVVPAQLPSQLLERRPDIAAAERRVAAANAQIGVAR 194 Query: 297 SDLYPSLSLNGSIA-----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + +P+L+L+G++ L+H S P N WS GP L + +FD G + + A ++ Sbjct: 195 AAFFPALTLSGTVGYRGTELSHLLSAP--NLFWSLGPALAVSLFDGGARTAAVESARAAN 252 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 ++ T+++TVL A++EVE+ L + + AV ++++ + YR G Sbjct: 253 EQAAATYRQTVLTALQEVEDNLAAAAALAQEQQWQTEAVAAAQRALDVVNNQYRAGTVGY 312 Query: 412 LDILDIE 418 L++L + Sbjct: 313 LNVLTAQ 319 >gi|331660668|ref|ZP_08361600.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA206] gi|331051710|gb|EGI23749.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA206] Length = 488 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ FND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQFNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQVLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|27378821|ref|NP_770350.1| outer membrane efflux protein [Bradyrhizobium japonicum USDA 110] gi|27351970|dbj|BAC48975.1| bll3710 [Bradyrhizobium japonicum USDA 110] Length = 350 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 14/206 (6%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 LLAGC VGP+Y P LPTQ++ + D +WW D+ L +L+ A++ N Sbjct: 81 LLAGCAVGPDYMGPPHLTLPTQWTNAPPRTKTTGDLGRWWLRLRDSLLTRLIDEAVEANP 140 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-------------QL 120 ++ +A + A+ + A LFPS S S + STG Sbjct: 141 SVAKAKATVREARATVAQAAAGLFPSVTGSGSMTDNKSSSAGSTGVDIGTSPYTLYQAGF 200 Query: 121 DSDWKIDLF-GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 D+ W++DLF G +R+IE+++ + SA ++ + + ++ + Y+DAR ++ RI++A + Sbjct: 201 DASWELDLFGGTQRNIEAAIRSEQSAEDELRYSLVTLLGDVAAYYVDARGYQARIALARR 260 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSL 205 + L+ K+ G+ + + L Sbjct: 261 TAASQRDTERLTRTKYEAGSATAVDL 286 >gi|78066065|ref|YP_368834.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77966810|gb|ABB08190.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 529 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/421 (21%), Positives = 179/421 (42%), Gaps = 29/421 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + + Sbjct: 62 WWRAYRDPQLDAWIANAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMREHW 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P + N+TG L + +DL+G+ ++ E +L + A AKL + Sbjct: 122 PDNVYYGPGPLANADTWNNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ + +AH+ + +L+H + G ++L + + E+ + E Sbjct: 182 EVNVVRAYVQMSMNYALLDLAHETFERQHSLADLAHKRLQAGLGTQLEVSQAESTLPDYE 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRN 274 I + E++ ++ H ++ L G + Q + L P + +PADL+ Sbjct: 242 RQIDSYEEAIQLARHQLAALAGKGPGAGDAIKRPQLS-----LDAPAGLPSAMPADLLGR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPK 329 RPD+ + I +AK+ YP++ L G +T + N W+ GP Sbjct: 297 RPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPIF+ G++++ + A + + + +T++ A+K++ + + I + Sbjct: 357 LSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARS 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLYIAIGS 448 V + +S LS +R+G +++L ++ + E I +LA + L A+G Sbjct: 417 VAANDRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-VHAQLMAALGG 475 Query: 449 G 449 G Sbjct: 476 G 476 >gi|289647229|ref|ZP_06478572.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] Length = 493 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 97/477 (20%), Positives = 203/477 (42%), Gaps = 37/477 (7%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSFLHADSLATDKAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFIPN 111 ++ D LN V IA + + A R+ A+ I + AS+ P Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARSMAQIAESSESVQVQGSASLMRHDWPE 123 Query: 112 LKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNV 156 + G L + +DL+G+ R+ +S LD A+ A+ A+L + Sbjct: 124 DQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHVSAAEQRQAQLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 182 QENVVRAYIQLSLEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPEAH 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ RP Sbjct: 242 RQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPALSLHTELKLPS--ALPAELLGQRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLY 331 D+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 299 DVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAIS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G++++ + +A ++ + + +T++ A+K + + L K +V Sbjct: 359 LPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAESVA 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 419 SAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|198282256|ref|YP_002218577.1| NodT family RND efflux system, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666470|ref|YP_002424619.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246777|gb|ACH82370.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518683|gb|ACK79269.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 519 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 114/483 (23%), Positives = 214/483 (44%), Gaps = 57/483 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI------GNSKNL--INIDTLKWWESFNDTSL 61 L IV AGC VGP+ P++ P ++ G + + ++ WW F+ ++L Sbjct: 29 LGIVAAAGCAVGPQPGAPNV-RAPAAYNAHPLDLHGGPQRIRWTQQESQAWWSLFHSSAL 87 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSV-RADLFPSSYASI---------------- 104 N ++ A++ N I QA A ++++++V + L PS A Sbjct: 88 NGYIRQAMEANPDI-QAARAALAREQSLIAVAQGGLLPSVGAGAGISRGRAQRTGANGGA 146 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI----ESSLANLDSAYAQVDIAKLNVISKL 160 S+R NL + G ++ + D+FG+++ + + A ++ Q ++ +S+ Sbjct: 147 SYRIPGNLYSLLLGTINVSYNPDVFGRQKDLVHAARARAAISRASLHQSEVFLAAAVSRA 206 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + I+ + ++ A QI + + L ++ G + S+ + EA + ++ I Sbjct: 207 V---INGAAARAQLDAARQIATADARLLRLLQQEYQLGYQNLQSVDQQEAITAAAQARIA 263 Query: 221 TLEKSFRMNVHNISTLLGY-PATEF----LHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 L+ + H ++ LLG P T+ L +Q S+ +P + P+ L R Sbjct: 264 PLQADVAVARHGLAALLGQSPDTDLPMPTLASLQLPSS-------LPTTL--PSALAAQR 314 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYL 332 PDI+ +L + A+ +A +DLYP ++ G A+T F +T WS G + Sbjct: 315 PDIQAAAAELKVAAAQADVATADLYPQFNITADIGKAAMTGGMFFNPISTLWSLGAGIAA 374 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV-- 390 PI++ G + + R A + ++ TVL+A +EV +AL ++ + T QH + Sbjct: 375 PIYNGGALHAQRRAALDQYKAVSDQYRGTVLDAFREVADALRAL---QGADTSYQHRLAA 431 Query: 391 -ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ L+ YR G +LD E A + V A+ Q V L++A+G G Sbjct: 432 QTAAGAALRLAEARYRDGATDYATVLDAEIAYQQDTVAAISARGQRYLDSVALFVALGDG 491 Query: 450 YNP 452 + P Sbjct: 492 WQP 494 >gi|319427618|gb|ADV55692.1| macrolide eflux system, outer membrane lipoprotein, MacC [Shewanella putrefaciens 200] Length = 471 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 97/453 (21%), Positives = 201/453 (44%), Gaps = 22/453 (4%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 ++ + LL GC + ++ P + + P+ + + +D WW+ F LNKLV Sbjct: 17 IAVGVALLGGCGSFMRSDFDPPALTI-PSHWQHTQVNEQVRVD--PWWQQFQQPDLNKLV 73 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNST----GQL 120 L N + AT + A+ + L+P +++S R P ST +L Sbjct: 74 SQVLSSNNDLALATLTLRKARLQAGLAQDALYPQLSSNLSASRSNPLNGGESTKSYQAKL 133 Query: 121 DSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +++DL+G+ ++ + L SA + + ++++ Y + +RI+++ Sbjct: 134 SVSYEVDLWGKVSAEMDQAQWSALASAEDRESTTQ-SLVATTASLYWKMGYLNQRIALSS 192 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +D ++ + L+ ++ GA +++++++ + + E+ L + + ++ LL Sbjct: 193 RSIDHSRQTLALTQRQYASGAVTQVNVLEAKRSLAGQEASHSQLIQQLTEAGNALAILLN 252 Query: 239 Y-PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 P F+ N P++ +P I +G+PADL+ RPD++ +L ++A Sbjct: 253 QAPGEAFVEI------NALPDVAVPEIAVGMPADLLVRRPDVKASLYQLRSALASKDATY 306 Query: 297 SDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + +PSLSL GS+ T + N S G L LP +++ N AE Q Sbjct: 307 TRYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIAEIDYQTAV 366 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + +++T+ +A ++V+NA+++ + KLQ ++ YR G + D + Sbjct: 367 VNYRKTLYSAFEDVDNAISAKQQFAYQGDKLQQQYNAAVAVEAIYESQYRHGAIGIQDWI 426 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + E L + + LY A+G Sbjct: 427 NAQENRRAAEASLLENRYNQLTAQATLYQALGG 459 >gi|239815395|ref|YP_002944305.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239801972|gb|ACS19039.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 498 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/363 (23%), Positives = 155/363 (42%), Gaps = 59/363 (16%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L S W+IDLFG+ R +S+ L SA A+ A++ V ++ +Y R ++++ ++ Sbjct: 145 LQSKWEIDLFGRLRADRDSAEQKLSSATAKWHEARVAVAAETANAYFAERACQQQLRVSE 204 Query: 179 QILDLYKKNIELSHLKFTQGATS----------------------KLSLVKLEAEIKSIE 216 + L+ L G T+ + V+ +A + Sbjct: 205 SDAKSRGETARLTDLSARAGFTAPADAALARASASDASGRLTQQRAVCAVQRKALVALSG 264 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 D PTLE+ L PA L + ++ +PA+ I RP Sbjct: 265 IDEPTLERK----------LAASPAQRTLPAVGSIAS-------------VPAEAISQRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYNTHWSFGP-KLYLP 333 D+ E +A + A +G A+++ YP LS++GSI + F W+ GP L +P Sbjct: 302 DVYAAELGVASASADVGSAEAERYPRLSISGSIGRMQIRTSGFRESLDTWTIGPVSLTVP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + D G +N A++ E ++ V A++EVE AL ++ AV+ + Sbjct: 362 LLDGGARAANSDAAKARYTEAVSLYRANVRQAVREVEEALVNLEATDARAADADAAVKNY 421 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERA-----TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + S + Y+ G SL ++ D R TA+V + +R+ +++V LY ++G Sbjct: 422 QASFDATQARYQSGLASLFELEDSRRTLFAAQTARVSL-----QRERTEAWVALYRSMGG 476 Query: 449 GYN 451 G+ Sbjct: 477 GWT 479 >gi|24372411|ref|NP_716453.1| outer membrane efflux family protein [Shewanella oneidensis MR-1] gi|24346377|gb|AAN53898.1|AE015526_9 outer membrane efflux family protein [Shewanella oneidensis MR-1] Length = 472 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 99/463 (21%), Positives = 207/463 (44%), Gaps = 38/463 (8%) Query: 6 AIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 ++ ++ I LL+GC + ++ P + + P Q+ + +++D WW+ FN LN+ Sbjct: 18 SVIAISIALLSGCGALMRSDFEPPALQV-PEQWQHTAVNSQVSLD--PWWQKFNQPELNQ 74 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 L+ L N + AT + A+ R +L+P ++ + L+ S+ + Sbjct: 75 LISQVLSSNNDLTIATLTLQKARLQAGLARDELYPQLSSNNAASVNKPLEGGSSSKAYKA 134 Query: 120 -LDSDWKIDLFGQRRHIESSLANLD----SAYAQVD---IAKLNVISKLIPSYIDARHFK 171 L +++DL+G+ AN+D +A A V+ ++++ Y + Sbjct: 135 NLSVSYEVDLWGKVS------ANIDQAQWTALASVEDRESTAHSLVATTASLYWQIGYLH 188 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +RI ++++ ++ ++ + L+ ++ GA ++L++++ + E+ L + + Sbjct: 189 QRIELSNKSIEYSRQTLALTERQYASGAVTELNVLESLRSLAGQEAAHSQLLQQLVEAEN 248 Query: 232 NISTLL----GYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLA 286 ++ LL G A E P+ +P I +GIPADLI RPD++ +L Sbjct: 249 ALAILLNRAPGQVAVEIKQL---------PDSAVPEIGVGIPADLIGRRPDVKAALYQLR 299 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++A + +PSLSL GS+ T + N S G L LP +++ N Sbjct: 300 SALASKNATYASYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLMLPFLQWNQMQINND 359 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A+ Q + +++T+ +A ++V+NA+++ + KL+ ++ ++ YR Sbjct: 360 LADIDYQTAIVNYRKTLYSAFEDVDNAISAKQQYAYQGEKLEQQFSAAAQAEAIYESQYR 419 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G + + +D + E L + + LY A+G Sbjct: 420 HGAIGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALGG 462 >gi|88707197|ref|ZP_01104888.1| Outer membrane efflux protein [Congregibacter litoralis KT71] gi|88698570|gb|EAQ95698.1| Outer membrane efflux protein [Congregibacter litoralis KT71] Length = 303 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 20/294 (6%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + L + LA C VGP Y P P T Q + S+ + D ++W +D L+ Sbjct: 7 LLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADA-QFWRELDDPVLHS 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNSTGQLD 121 LV+ AL N I A R A R D +P+ AS IS + + + D Sbjct: 66 LVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDASRSD 125 Query: 122 SD-----------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 D W++D FG+ RR +ES A +++ A + ++ ++++L +Y R Sbjct: 126 RDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYFRLRG 185 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++ +A + L + F G + + ++ S IP LE + Sbjct: 186 LQVQLQVARDNEINQADTLRLIEVLFENGRGTSFDADRARTQLALTRSRIPPLEAEAAVA 245 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 H I+ L G + + P L IN G P DL+R RPD+ E+ Sbjct: 246 AHRIAVLTGRTPAAMAEVLDHPAA--LPELPAQINAGAPGDLLRRRPDVAAAER 297 >gi|71738015|ref|YP_274162.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558568|gb|AAZ37779.1| outer membrane efflux lipoprotein, NodT family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 467 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 197/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D WW+ F LN+L++ A + + + A R+ A+ + + Sbjct: 36 PARWAFAQSAAAQRSDA-HWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQASAIIG 94 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 95 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 154 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 155 ALQSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 214 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 215 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 270 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++L+ RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 271 LNWPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAE 330 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 331 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 390 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L+ +R V V L + Sbjct: 391 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 447 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 448 ARLQ---ASIALYKALGGGW 464 >gi|154492752|ref|ZP_02032378.1| hypothetical protein PARMER_02391 [Parabacteroides merdae ATCC 43184] gi|154087057|gb|EDN86102.1| hypothetical protein PARMER_02391 [Parabacteroides merdae ATCC 43184] Length = 481 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 101/448 (22%), Positives = 193/448 (43%), Gaps = 47/448 (10%) Query: 39 GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 G++ + + L+W F D+ L V++ALQ N + Q+ ER+ ++ N+ + L P Sbjct: 43 GHTYDTAFVKPLEWNVFFQDSILQGYVEVALQNNYSFKQSMERVTMSRANLQRAKGLLLP 102 Query: 99 SSYASIS---HRF-------IPNLKTNSTGQ----------------LDSDWKIDLFGQ- 131 I +RF + N +TN L+ W+ D++G+ Sbjct: 103 EVSLGIGTSVNRFGEYTMDGVGNSETNVPSLAKDKHIPDPYRDFGLFLNFQWEADIWGKL 162 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 R ++++A ++ A+ +IS+L Y + +R + + K++ EL+ Sbjct: 163 TRKKQAAVARWMASVEATRFAQSVLISELAVHYYELIGLDKRRDVLEEAHISSKRSYELT 222 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 +GA ++L++ + A + IES + ++ I+ LLG F +++ Sbjct: 223 RQLKKEGAETQLAVDQFHARMLLIESKLLENDQLIGEKERAIACLLGV----FPFEIRRM 278 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 S + P++ G+PA+++ RPD+R E +L S A + AK+ YPSL L Sbjct: 279 SFEELRQIPFPLSDGVPANMLTLRPDVRAAEMELLASKADVMAAKAAFYPSLVLGAGGGF 338 Query: 312 THDNSFPGYNTHWSFGPK---------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 NSF W P + P+F + +I+S A +S + + ET Sbjct: 339 ---NSFD--LGKWFTAPASLVYDLAAGITAPVFQRNQIRSMWNEARASQRIALSQYHETA 393 Query: 363 LNAIKEVENA-LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 L A EV + +N+ +++ K V H++S++ + ++ L++L Sbjct: 394 LKAYTEVLDLYCAGLNQVERVRLKEVETVA-HQRSVTNANELFKLNYVGFLEVLSANERY 452 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E++ L + + LY A+G G Sbjct: 453 LDSELERIDIITDLCRKKILLYRALGGG 480 >gi|293603900|ref|ZP_06686315.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] gi|292817737|gb|EFF76803.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] Length = 491 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 77/357 (21%), Positives = 171/357 (47%), Gaps = 36/357 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYASISHR-- 107 +WW+ + +L+ LV+ L + + A + A+E + + V + L PS A S Sbjct: 70 EWWKRYGSAALDALVQEGLANSPNLAAAERNLAGAREQLRAQVNSSLLPSVDAGASGTRN 129 Query: 108 ---FIPNLKTNST------GQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVI 157 +PNL +T GQ+ + + +DLFG R +SLA ++ +++ A+ ++ Sbjct: 130 RALTMPNLPQPTTLYNVFTGQVQATYDLDLFGAARFANASLAAQVEQQAFRLESARRSLA 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ + + ER+++ + + L ++ + ++ G+ S+ + + + ++E+ Sbjct: 190 GNIVTGALTSASLAERVALTEKQVVLLRQVARDTQRRYELGSASQNDALDADQDAATLEA 249 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN--------LYIPINIGIPA 269 +P L ++ H ++ LLG +S + P+ + + + +P+ Sbjct: 250 SLPGLRAQWQATRHALAVLLG------------RSPDQAPDDLAFNTLAVPQQVPVVVPS 297 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSF 326 +L+ +RPDI + + + A +G+A + L+PSLSL+ S+ + + G + W+ Sbjct: 298 ELLASRPDILVADAVVQAAAADVGVATAQLFPSLSLSASMGKGGFSWPAALSGAGSIWAI 357 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 G L PIF G + + R A+ + + +++TVL A ++V + L ++ D + + Sbjct: 358 GASLTQPIFHGGALLAERRAAKERYEASVLQYKQTVLTAFQDVADTLARLDADGQAL 414 >gi|217972017|ref|YP_002356768.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS223] gi|217497152|gb|ACK45345.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS223] Length = 483 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 97/462 (20%), Positives = 206/462 (44%), Gaps = 30/462 (6%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LL+GC + ++ P + + P Q+ + +D WW+ F+ L+KLV Sbjct: 21 IALGIALLSGCGSFMRSDFEPPALAI-PEQWQNTTVNEQVKVD--PWWQQFHQPELDKLV 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNST----GQL 120 L N + AT + A+ R DL+P A++ + R P ++T L Sbjct: 78 SQVLSTNNDLTLATLTLRKARLQAGLTRDDLYPQLSANLGASRNQPLDGGDATKSYQANL 137 Query: 121 DSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAK------LNVISKLIPSYIDARHFKER 173 +++DL+G+ AN+D A +A + A+ ++++ Y + +R Sbjct: 138 SVSYEVDLWGKVS------ANIDQAQWAALASAEDRESTTQSLVATTASLYWQIGYLNQR 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + + K+ + L+ ++ GA +++++++ + + E+ L + + + + Sbjct: 192 VDLSQKSIAYSKQTLALTQRQYDSGAVTQVNVLEAQRSMAGQEAAHSQLIQQLTVAKNAL 251 Query: 234 STLLGY-PATEFLHYMQKQSNNFQ----PNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 + LL PA + + + P++ +P +++G+PADL+ RPD++ +L Sbjct: 252 AILLNQAPAADPAQSLASGETWVEIKQLPDVAVPDVSVGVPADLLVRRPDVKASLYQLRS 311 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++A + +PSLSL G + T + N S G L LP +++ N Sbjct: 312 ALASKDATYASYFPSLSLTGGVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNEI 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q + +++T+ +A ++V+NA+++ + + KL ++ YR Sbjct: 372 ADIDYQTAVVNYRKTLYSAFEDVDNAISAKQQYRYQGEKLAQQFSAAAAVEAIYESQYRN 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G + + +D + E L + + LY A+G Sbjct: 432 GAIGIQNWIDAQENRRSAEAALLENRYNQLTAQAMLYQALGG 473 >gi|293603584|ref|ZP_06686005.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] gi|292818020|gb|EFF77080.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] Length = 470 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 98/439 (22%), Positives = 191/439 (43%), Gaps = 26/439 (5%) Query: 26 KPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 +P + +P ++ G+ N WW +F+D L+ L+ L +N + A R+ Sbjct: 34 EPPLTQVPAAWTYGDPANAQAPLAQGGAWWRNFDDPVLDGLIDAVLARNNDLAAAAIRVR 93 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNL------KTNSTGQLDSDWKIDLFGQ-RRHIE 136 A+ L P S NL + QL +++DL+G+ R + Sbjct: 94 RAQYQAGLTEDQLIPQLGGDASLTRNRNLYGDRAITRGNQAQLTVSYEVDLWGKLSRQRD 153 Query: 137 SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 ++ + A L+++ Y +RI+ + + + ++ +L ++ Sbjct: 154 AAQWEALATEQDRQSAALSLVGTTATLYWQTAFINQRIASSEESIAYARRTQDLVRAQYA 213 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNN 254 G S L L + E + S ++ L + R+ N T+L G P + + Sbjct: 214 AGGASALELAEAEQTVASQQAAHALLVQQ-RVEYTNALTILFDGPPDRSMANPPRLPPYP 272 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--- 311 G+PADL+ RPD+R E +L +S+A + +S YP ++L G++ Sbjct: 273 L-----PEARAGVPADLLGRRPDLRAAEMRLRESLANVDATRSSFYPPVTLTGAVGSASP 327 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 T N N + G L LP +++ NI+ +++ +E+ + +++ + A+ +VEN Sbjct: 328 TLSNML--QNPVATLGVGLTLPFLQWNQMQLNIKISKADYEERVVNFRQALYQAMADVEN 385 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE--RATAKVEVDLS 429 AL++ + +L ++ +++ L + YR G SL D LD + R TA++ D + Sbjct: 386 ALSNRTQLTLQGEQLALSLRAAREAERLYEVRYRAGAVSLKDWLDAQEKRRTAEIARDEN 445 Query: 430 IAKRQLAKSYVDLYIAIGS 448 R + + V +Y A+G Sbjct: 446 GLNRLV--NQVTVYRALGG 462 >gi|170696182|ref|ZP_02887316.1| outer membrane efflux protein [Burkholderia graminis C4D1M] gi|170138910|gb|EDT07104.1| outer membrane efflux protein [Burkholderia graminis C4D1M] Length = 222 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 13/198 (6%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 I G+P+ L+ RPDI E+ +A + A++G+AKS +P L + G A ++++ G Sbjct: 7 IPAGLPSSLLERRPDIAAAERAMASANARVGLAKSAFFPQLDVTG--AFGYESATLGDLF 64 Query: 323 HWS-----FGP----KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 WS GP L LPIFD G+ +N+ +A + E +++ VL A KEVE++L Sbjct: 65 QWSTRAFLLGPFAGTALTLPIFDGGRRSANLAKARAKLDEDVAQYRQQVLVAFKEVEDSL 124 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV-DLSIAK 432 +++ +++ A+ +++ +S Y +G+ S LD++D +R + E+ + +A Sbjct: 125 SNLRLLDDQISEQGFAMSASERAEQMSATQYEEGQVSYLDVIDAQRQVLQSELRSIHLAS 184 Query: 433 RQLAKSYVDLYIAIGSGY 450 Q A S V L A+G G+ Sbjct: 185 EQ-AVSTVALIRALGGGW 201 >gi|221067259|ref|ZP_03543364.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220712282|gb|EED67650.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 494 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 101/465 (21%), Positives = 191/465 (41%), Gaps = 42/465 (9%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSLNKLVKIALQ 70 GC + GP + +P L + +S +L D +WW D LN+L+ AL Sbjct: 33 GCASQGPAH-QPLARLGSADVGLNDSSSLSTADATALASSQWWAGLGDARLNQLIDQALA 91 Query: 71 QNLTILQATERIN------AAKENILSVRADLFPSSYAS--ISHRFIP-----NLKTNST 117 + ++ + R A VR L + ++ IP N+ + Sbjct: 92 GSPSLAASNARFEKAAALATASSTASDVRGTLSADATRQRYTANGMIPAPIAGNIYNSGN 151 Query: 118 GQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q W D FG+ ++++L +A A A + +++ SYI + + Sbjct: 152 LQAGLSWSPDFFGKHAADLQAALGQARAAKADSAAASNQLAAQVARSYIALARLIAQKEV 211 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + + LS + G S++ L + +A + ++ I L + + I+ L Sbjct: 212 AERTLGQRQSLLNLSEQRTRAGLDSQVELTQAQAGMPDAQTQIEMLGEQITLARRTIAVL 271 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 N P L + P+ + ADL+ RPD+ ++ + I Sbjct: 272 CAQ--------APDAQNALSPRLSVLRIQPVPQALGADLLGRRPDVVAARWRVEAATQGI 323 Query: 293 GIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++D YP ++L G AL DN G + P L LPIFD ++++ +R ++ Sbjct: 324 ESARADFYPDVNLTAFVGLNALGLDNLLQGSSHQMGITPALRLPIFDGKRLRAQLRGKQA 383 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + VL+A+K+ +A+ S+ K+ ++ +++ ++ Y+ G Sbjct: 384 DLDTAIAQYNGAVLDAVKQAGDAIASVQSLKRQQQLQTESLSKAERAYDFAVQRYQAGLG 443 Query: 410 SLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + +L+ E ++ VDL R+L + V L A+G G++ Sbjct: 444 SQITVLNTETQLINQRRLAVDLQ--AREL-DTRVALAAALGGGWS 485 >gi|91788690|ref|YP_549642.1| RND efflux system outer membrane lipoprotein NodT [Polaromonas sp. JS666] gi|91697915|gb|ABE44744.1| RND efflux system, outer membrane lipoprotein, NodT [Polaromonas sp. JS666] Length = 478 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/385 (22%), Positives = 167/385 (43%), Gaps = 35/385 (9%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKIALQQNL 73 GC VGP+Y +P + D L+ WW F D L++L N Sbjct: 24 GCAVGPDYKRPATADVSAFKEAEGWVPAAPADALERGPWWTLFGDPVLDQLQSRVEVSNQ 83 Query: 74 TILQATERINAAKENILSVRADLFPS---------------SYASISHRFIPNLKTNSTG 118 + A A+ + RA LFPS +S + N Sbjct: 84 NVALAVAAYAQARALVREQRASLFPSVTLDGGASRSKSSGSGSSSSGAGAGGRIGNNYQL 143 Query: 119 QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W+ D++G+ R ++ + A ++ A + AKL+ +L +Y+ R + ++ Sbjct: 144 SIGGSWEPDVWGRLGRAVDGASAGAQASAADLASAKLSAQGELAVNYLSLRQTDAQKALL 203 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + Y++ +E++ ++ +K +++ + ++ + ++ L + H I+ L+ Sbjct: 204 ESTIAGYERALEITQNRYAASIAAKTDVLQAQTQLANARAEAAGLVRQRAQLEHAIAVLV 263 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 G F P + P I +G+P+ L++ RPDI E+++A + +IG Sbjct: 264 GEAPGNF---------TLAPAAWTPVVPEIPVGVPSTLLQRRPDIAAAERRVAQANEQIG 314 Query: 294 IAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 IAKS +PSLSL+ S + F ++ WS G +F+ G + + A++S Sbjct: 315 IAKSAYFPSLSLSASAGSGASRLADLFKASSSVWSLGISAAQVLFNAGATGARVEGAQAS 374 Query: 351 AQEQYITWQETVLNAIKEVENALTS 375 ++ +++ VL A ++VE+ L++ Sbjct: 375 HEQAVARYRQAVLTAFQDVEDQLSA 399 >gi|67459035|ref|YP_246659.1| RND efflux system, outer membrane protein [Rickettsia felis URRWXCal2] gi|67004568|gb|AAY61494.1| RND efflux system, outer membrane protein [Rickettsia felis URRWXCal2] Length = 463 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 105/447 (23%), Positives = 196/447 (43%), Gaps = 58/447 (12%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLNKLVKIALQQNL 73 C+ T P++ L PT + N+ +L D + +WW FND LN+L++ +L N Sbjct: 63 CSCSTKQNNTIPNLSL-PTTW---NNYSLAQKDNMPQQWWLQFNDPVLNQLIEESLTGNS 118 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR 133 I A + AAK + V + FP +I+L G Sbjct: 119 DIELAMSNVLAAKAQLNLVNSYRFP--------------------------QINLQGGAN 152 Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 ++S + +L+VIS + SY + ++I + ++++ + +L+ Sbjct: 153 RTKNS----------KETVRLSVISNVTMSYFNLLALDKQIYLTEKLIEAQTEIYKLNQK 202 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH---YMQK 250 + G +S+ + +E+ +P L++ + L+G ++ Y K Sbjct: 203 LYNLGVGDLISVSEAASELALTNLSLPPLKQQRHEQETALKILVGRTPENIVNGLIYRDK 262 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 + F P L + I +P++L+ RPDI+ E+ L + A + K+ +P LSL G + Sbjct: 263 PIDYF-PALPVLPKI-LPSELLEQRPDIKAAEQNLLAADANLKAIKATYFPQLSLTGLLG 320 Query: 311 LTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAI 366 + +N+ W G + PIFD GK ++N++ AE S +EQYI ++ V A Sbjct: 321 FGSNKLNTLFNSSAQTWQIGGNIAGPIFDFGKTRANVQIAE-SVKEQYIAQYKSVVRTAF 379 Query: 367 KEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 EV +AL+ + N + I + + A+ L+ Y++G L +L ++ + Sbjct: 380 GEVMDALSLEQTSNSNFHIWQQNEAAL---TSIFKLAAQRYKRGNIDYLTVLTAKQNVLQ 436 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E+D K S V+++ A+G + Sbjct: 437 NEIDGVAIKLSQLSSMVNIFHALGGKW 463 >gi|225025498|ref|ZP_03714690.1| hypothetical protein EIKCOROL_02398 [Eikenella corrodens ATCC 23834] gi|224941782|gb|EEG22991.1| hypothetical protein EIKCOROL_02398 [Eikenella corrodens ATCC 23834] Length = 481 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/374 (22%), Positives = 171/374 (45%), Gaps = 16/374 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WW+SF D+ LN LV+ AL N+ + QA +N A + NIL A+L P AS+ Sbjct: 67 WWQSFGDSGLNALVEQALANNVDLKQAAVSVNKALYQANILG--ANLVPEFNASLGANAN 124 Query: 110 PNLKTNS-----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIP 162 NL T + QL +++DL+ + S+ A A Q D+A +L VI+ ++ Sbjct: 125 RNLDTRQNSHSYSSQLGLSYELDLWRKLNATASAQAWEQRATEQ-DLAATRLTVINNVVD 183 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + E I + + ++ YK+ ++++ K+ G + + + + E + + E+ + +L Sbjct: 184 AYFQVAYLNEAIKLTEKTIEQYKQILQIARSKYRHGRVASIEVTQAEQSLLAAENSLLSL 243 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++S + LL + M Q +F+ +++ +P + RPD+ + Sbjct: 244 QQSRSNTEATLRNLLNLRPGQA---MAVQPESFRLPEGGKLDLNVPISTLAARPDLIAAD 300 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIK 341 +L ++ YPS++LN +++ + ++S +N G L LP + + Sbjct: 301 YRLQSALKSQQAQYRSWYPSITLNAALSTSSEHSKNLFNVPILGGSVSLNLPFLNWRTMN 360 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R AE+ + + +++ + A+ EV+ ++ + + L ++ Sbjct: 361 WKDRSAEADFENAKLAFEKALTTALNEVDTNYRQYRASRQTLENQRRRHRLDVENSRYYR 420 Query: 402 INYRQGRYSLLDIL 415 + Y+ GR L D L Sbjct: 421 VRYQHGRNELKDWL 434 >gi|167839305|ref|ZP_02465989.1| outer membrane efflux protein [Burkholderia thailandensis MSMB43] Length = 530 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 101/475 (21%), Positives = 203/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----------LKWWE 54 RA+ + +AGC++ P Y +P P+ P+ + G + + + L W Sbjct: 12 RALPIALALGIAGCSMEPAYHRPDAPI-PSAYPNGPAYSTSDAQRTAPSEPVAPDLGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ A I S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDAGIGFTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV----IS 158 L+ + ++S ++++DLFG+ R + + Y + A+ +V ++ Sbjct: 131 LRAPGQSATINSYNANIGLTNFELDLFGRVRSLSHAA---QEQYLATEEARRSVHISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLKSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 VEQYTRQVAQDENALAVLIGGPLPDGVSRAAPLDGR---TLLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ + + + Sbjct: 364 NAGSNRANLDLATVRRDINVAGYERTIQDAFREVADNLAARATYEREAKAQEAMIHDLTE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L + S V LY A+G G+ Sbjct: 424 TKRLAEMRFRNGVDDYFGVFDTQRQLFAAQQLLVTYELAGLTSRVTLYKALGGGW 478 >gi|126175731|ref|YP_001051880.1| RND efflux system outer membrane lipoprotein [Shewanella baltica OS155] gi|125998936|gb|ABN63011.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS155] Length = 483 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 97/462 (20%), Positives = 206/462 (44%), Gaps = 30/462 (6%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LL+GC + ++ P + + P Q+ + +D WW+ F+ L+KLV Sbjct: 21 MALGIALLSGCGSFMRSDFEPPALAI-PEQWQNTTVNEQVKVD--PWWQQFHQPELDKLV 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNST----GQL 120 L N + AT + A+ R DL+P A++ + R P ++T L Sbjct: 78 SQVLSTNNDLTLATLTLRKARLQAGLTRDDLYPQLSANLGASRNQPLDGGDATKSYQANL 137 Query: 121 DSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAK------LNVISKLIPSYIDARHFKER 173 +++DL+G+ AN+D A +A + A+ ++++ Y + +R Sbjct: 138 SVSYEVDLWGKVS------ANIDQAQWAALASAEDRESTTQSLVATTASLYWQIGYLNQR 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + + K+ ++L+ ++ GA +++++++ + + E+ L + + + + Sbjct: 192 VDLSQKSIAYSKQTLDLTQRQYDSGAVTQVNVLEAQRSMAGQEAAHSQLIQQLTVAKNAL 251 Query: 234 STLLGY-PATEFLHYMQKQSNNFQ----PNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 + LL PA + + P++ +P +++G+PADL+ RPD++ +L Sbjct: 252 AILLNQAPAAVPAQSLASGETWVEIKQLPDVAVPDVSVGVPADLLVRRPDVKASLYQLRS 311 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++A + +PSLSL G + T + N S G L LP +++ N Sbjct: 312 ALASKDATYASYFPSLSLTGGVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDI 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q + +++T+ +A ++V+NA+++ + + KL ++ YR Sbjct: 372 ADIDYQTAVVNYRKTLYSAFEDVDNAISAKQQYRYQGEKLAQQFSAAAAVEAIYESQYRN 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G + + +D + E L + + LY A+G Sbjct: 432 GAIGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALGG 473 >gi|146294256|ref|YP_001184680.1| RND efflux system outer membrane lipoprotein [Shewanella putrefaciens CN-32] gi|145565946|gb|ABP76881.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella putrefaciens CN-32] Length = 471 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 199/454 (43%), Gaps = 24/454 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++ + LL GC G PL +P+ + + +D WW+ F LNKL Sbjct: 17 IAVGVALLGGC--GSFMRSDFEPLALTIPSHWQHTQVNEQVRVD--PWWQQFQQPDLNKL 72 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNST----GQ 119 V L N + AT + A+ + L+P +++S R P ST + Sbjct: 73 VSQVLSSNNDLALATLTLRKARLQAGLAQDALYPQLSSNLSASRSNPLDGGESTKSYQAK 132 Query: 120 LDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L +++DL+G+ ++ + L SA + + ++++ Y + +RI+++ Sbjct: 133 LSVSYEVDLWGKVSAEMDQAQWSALASAEDRESTTQ-SLVATTASLYWKMGYLNQRIALS 191 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + +D ++ + L+ ++ GA +++++++ + + E+ L + + ++ LL Sbjct: 192 SRSIDHSRQTLALTQRQYASGAVTQVNVLEAKRSLAGQEASHSQLIQQLTEAGNALAILL 251 Query: 238 GY-PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 P F+ N P++ +P I +G+PADL+ RPD++ +L ++A Sbjct: 252 NQTPGEAFVEI------NALPDVAVPEIAVGMPADLLVRRPDVKASLYQLRSALASKDAT 305 Query: 296 KSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + +PSLSL GS+ T + N S G L LP +++ N AE Q Sbjct: 306 YTRYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIAEIDYQTA 365 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++T+ +A ++V+NA+++ + KLQ ++ YR G + D Sbjct: 366 VVNYRKTLYSAFEDVDNAISAKQQFAYQGDKLQQQYNAAVAVEAIYESQYRHGAIGIQDW 425 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + E L + + LY A+G Sbjct: 426 INAQENRRAAEASLLENRYNQLTAQATLYQALGG 459 >gi|86142163|ref|ZP_01060673.1| outer membrane efflux family protein [Leeuwenhoekiella blandensis MED217] gi|85830915|gb|EAQ49372.1| outer membrane efflux family protein [Leeuwenhoekiella blandensis MED217] Length = 483 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 104/482 (21%), Positives = 210/482 (43%), Gaps = 51/482 (10%) Query: 9 SLFIVLLA--GCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++ VLLA C P + + L LP F+ +S + N ++W E F D+ L L Sbjct: 14 AVVCVLLAFSACK-APSLVEREIDLKDLPQNFTNTSSTDTTNTALIQWKEYFTDSYLTTL 72 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISHRF---------- 108 + AL N + + I ++ I + + + P ++ R+ Sbjct: 73 IDSALVNNQELNIMLQEIAISQAEIKAKKGEYLPFVGFGAAAETEKVGRYTSQGANDANT 132 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKL 160 P N L + W++D++ + R+ + +++ N S+ + ++ ++ Sbjct: 133 DIKEGVEFPEPLPNYQFGLHATWELDIWKKLRNAKKAAVFNYLSSVEGRNFMVTQLVGEI 192 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIES 217 SY + +++I ++ +++ + L+ + L++ K EAE+ KS++ Sbjct: 193 AESYYELLALDNQLAIVNRNIEIQSNAYRIVRLQKEAARATGLAVSKFEAEVLHTKSLQF 252 Query: 218 DIPT--LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 DI +E R+N L+G F ++Q+ +++ I GIPA L+ NR Sbjct: 253 DIQQRIIEAENRINF-----LVG----RFPQHVQRSTDDLLMMKPKAIRAGIPAQLLENR 303 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPK 329 D++ E L + + +AK+ YPSL ++ + N P Y + +S + Sbjct: 304 TDVKQAELALEAAKLNVKVAKARFYPSLGISAGVGFEAFN--PKYLLDTPESLLYSIAGE 361 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+ ++ +IK+ A + + ++ TVLNA EV N L+ ++ +K Sbjct: 362 LTAPLINRNEIKAAYASANAKQIQAVYDYERTVLNAYIEVANQLSKVDNLEKSYELKAQE 421 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V+ +S+++S + R +++L +R + +L K +YV +Y A+G G Sbjct: 422 VDALNRSVNISSQLFSSARADYMEVLMTQRDALESNFELVETKMAQMNAYVHMYQALGGG 481 Query: 450 YN 451 +N Sbjct: 482 WN 483 >gi|254245632|ref|ZP_04938953.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] gi|124870408|gb|EAY62124.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia PC184] Length = 552 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 184/426 (43%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + Sbjct: 89 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 148 Query: 98 PSSYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLN 155 P + + N T N+TG L + +DL+G+ ++ E +L + A AKL Sbjct: 149 PDNV-YYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE 207 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + Sbjct: 208 LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY 267 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 E I + E++ ++ H ++ L G A + + +P L + G+P A Sbjct: 268 ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIK---------RPQLALDAPAGLPSAMPA 318 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHW 324 DL+ RPD+ + I +AK+ YP++ L G +T + N W Sbjct: 319 DLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGW 378 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + GP L LPIF+ G++++ + A + + + +T++ A+K++ + + I Sbjct: 379 TAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKK 438 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLY 443 +V + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 439 DAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-AHAQLM 497 Query: 444 IAIGSG 449 A+G G Sbjct: 498 AALGGG 503 >gi|315224563|ref|ZP_07866389.1| multidrug efflux pump channel protein [Capnocytophaga ochracea F0287] gi|314945429|gb|EFS97452.1| multidrug efflux pump channel protein [Capnocytophaga ochracea F0287] Length = 465 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 112/487 (22%), Positives = 215/487 (44%), Gaps = 74/487 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTSLNKL 64 AI ++ + L A C Y +P++ + F N S + ++ + W F D L + Sbjct: 10 AIVTIALTLTA-CAGRKTYERPNV-VNEKLFRTDNISTDSLSSANVSWRNIFTDPLLQQH 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-----TNSTGQ 119 + AL NL + A +N++S +A L S A FIP L T ST Sbjct: 68 ISKALSNNLDV-------RVAMQNVVSAQAYLKQSKAA-----FIPTLSVGANYTRSTSS 115 Query: 120 LDS-------------------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLN 155 L++ W+ D++G+ R S LA +++ A + Sbjct: 116 LNAGGGASDRTYNNLFDITGNASWEADIWGKLSAQKRASYASYLATVEAQKA----VQSE 171 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V++ L +Y E+ + Q +D +K++E + G+T++++ ++EA + + Sbjct: 172 VVATLATAYYQLLMLDEQKKVLEQTIDFRQKSLETTKQLKKAGSTTEVATKQIEALVYNA 231 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + T+ S + I LLG E H +++ S + G L+ NR Sbjct: 232 QAQLITINNSVWTLENTICVLLG----EEPHNIER-STLAEQQFPTQFRQGYAVSLLENR 286 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGPKLYL 332 PD+ E L ++ +A+S+ YP+L+L+ G I+ T D F + +F L Sbjct: 287 PDVARAELNLRNAFELTNVARSNFYPTLTLSARGGISSTELDTWFSAKSMFANFIAGLAQ 346 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQH--- 388 PI ++ +I++ +++ + + +++ +L+A KEV +A+ + +D+ I K Q Sbjct: 347 PILNRRQIRTQYELQKAAQETALLNFKKAILSAGKEVSDAMRQFSSQDEFIQLKTQEMKA 406 Query: 389 ---AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY--VDLY 443 A + K+ M+NY L+++ E ++ +LS+A Q + + LY Sbjct: 407 YQDATDYSKQLFDSGMVNY-------LEVITAE--VNRLNAELSVANAQFTRMQYGITLY 457 Query: 444 IAIGSGY 450 A+G G+ Sbjct: 458 KALGGGW 464 >gi|170732777|ref|YP_001764724.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169816019|gb|ACA90602.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 505 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 184/426 (43%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + Sbjct: 42 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 101 Query: 98 PSSYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLN 155 P + + N T N+TG L + +DL+G+ ++ E +L + A AKL Sbjct: 102 PDNV-YYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE 160 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + Sbjct: 161 LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY 220 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 E I + E++ ++ H ++ L G A + + +P L + G+P A Sbjct: 221 ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIK---------RPQLALDAPAGLPSAMPA 271 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHW 324 DL+ RPD+ + I +AK+ YP++ L G +T + N W Sbjct: 272 DLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGW 331 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + GP L LPIF+ G++++ + A + + + +T++ A+K++ + + I Sbjct: 332 TAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKK 391 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLY 443 +V + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 392 DAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-AHAQLM 450 Query: 444 IAIGSG 449 A+G G Sbjct: 451 AALGGG 456 >gi|254263731|ref|ZP_04954596.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1710a] gi|254214733|gb|EET04118.1| outer membrane efflux protein OprM [Burkholderia pseudomallei 1710a] Length = 259 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%) Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHD 314 NL I G+P+DL+ RPDI E+ L + A IG A++ +P +SL G+ + T Sbjct: 28 NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLG 87 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 F WSF P + LPIF+ G+ +N+ A + + +++ + +A +EV + L Sbjct: 88 GLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLA 147 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + + + L+ ++ LS + YR G S L +L + DL A++Q Sbjct: 148 ARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQ 200 Query: 435 LAKS-------YVDLYIAIGSGY 450 L + VDLY A+G G+ Sbjct: 201 LISARLARWTNLVDLYRALGGGW 223 >gi|307824056|ref|ZP_07654283.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307734840|gb|EFO05690.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 489 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/343 (21%), Positives = 169/343 (49%), Gaps = 22/343 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HR 107 +WW F++ LN+L++ AL+ + ++ A R+ A+ A++ PS A + R Sbjct: 59 QWWRDFHNAELNRLIETALKDSPSLHAAAARLTQAEAVADFQAAEMLPSISAGVEFHQRR 118 Query: 108 FI------PNLKTNSTGQ-LDS---DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 F PN TG +D + +DL+G+ + +ES+L + +++ +A+L + Sbjct: 119 FSETDFYGPNGGKTFTGAYIDPAVFRYHLDLWGKDKAALESALGKEKAQASELAMARLML 178 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + SYI +E I +AH + + + ++L+ L++ +G TS+ + + ++++ Sbjct: 179 STAIARSYIRLCSSEEDIELAHGLTEQAEGKMQLAELRWQRGLTSQDLVYAGKQQLEAAR 238 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 ++ ++ + ++ L+G ++ + N +L P I + L+ +RP Sbjct: 239 QRETSVRNQAQVLRNRLAALVGQ-GPDWGKIIHVAENKVAGHLPQPEAIAL--GLLAHRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLY 331 D+ ++ + +AK++ YP ++L G L N G + + GP + Sbjct: 296 DVAAAMWRVEAAAQLTKVAKTNFYPDVNLVGFAGLRSLNLKDLFLSNGASVAYGMGPTIT 355 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 LPIF+ G++++ ++ +++ ++ ET+L A+++V ++L Sbjct: 356 LPIFEGGRLEAELKNQQAAYDAAAESYNETLLAAVQQVADSLA 398 >gi|116689471|ref|YP_835094.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|116647560|gb|ABK08201.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 505 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 184/426 (43%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + Sbjct: 42 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 101 Query: 98 PSSYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLN 155 P + + N T N+TG L + +DL+G+ ++ E +L + A AKL Sbjct: 102 PDNV-YYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE 160 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + Sbjct: 161 LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY 220 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 E I + E++ ++ H ++ L G A + + +P L + G+P A Sbjct: 221 ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIK---------RPQLALDAPAGLPSAMPA 271 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHW 324 DL+ RPD+ + I +AK+ YP++ L G +T + N W Sbjct: 272 DLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGW 331 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + GP L LPIF+ G++++ + A + + + +T++ A+K++ + + I Sbjct: 332 TAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKK 391 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLY 443 +V + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 392 DAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-AHAQLM 450 Query: 444 IAIGSG 449 A+G G Sbjct: 451 AALGGG 456 >gi|308274122|emb|CBX30721.1| hypothetical protein N47_E42330 [uncultured Desulfobacterium sp.] Length = 292 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 138/293 (47%), Gaps = 19/293 (6%) Query: 5 RAIFSLFIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 + SL + ++A GC+ P+Y+KP + L S+ ++ + IN + WWE+F D +LN Sbjct: 4 KLCISLIVAVMAIYGCSFAPKYSKPQISLPSEPASVTDNTSTINTN---WWENFGDENLN 60 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA---------SISHRFIPNLK 113 L++ AL+ N + A RI A+ + +AD +P A S F Sbjct: 61 LLIEEALKNNDDLKLAVARIEEARSRLGFAKADRYPVINANGTASRQKTSTEASFFGGAY 120 Query: 114 TNSTGQLDSD--WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 N+ L +D +++DL+G+ + E++L+ L S A D +L++IS + Y + Sbjct: 121 INNYFSLSADVAYELDLWGKIKNRKEAALSALLSTKAGKDALQLSLISNVATVYFNLVSL 180 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ IL YK+ E ++ G ++ + + +A+ S+ + L++ + Sbjct: 181 GRQLQTTENILTSYKEIYEFRQKQYKHGVLDEMVVQQAKAQYDSVRILLENLKEQDAILK 240 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 +S LLG E + ++ + +P +P+ L+ +RPDI E+ Sbjct: 241 STLSLLLGRTPKEIFDNLHNINHKLPEPIVVP--AMLPSKLLESRPDIMQAEE 291 >gi|91782253|ref|YP_557459.1| major facilitator superfamily efflux pump outer membrane lipoprotein [Burkholderia xenovorans LB400] gi|91686207|gb|ABE29407.1| MFS efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 502 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 87/420 (20%), Positives = 177/420 (42%), Gaps = 20/420 (4%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 +L W F D L +L+ AL + +I QA R+ A I + RA LFP S S Sbjct: 62 SLDWANQFGDQQLPRLIAEALDGSPSIAQAQARLAKASSYIETSRAALFPKVNGSYSWTR 121 Query: 108 ------------FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 F + + + W +DL+G+ R+ + +++ +A A + A++ Sbjct: 122 ELYSANAIYPPPFGGTWFSENNVLASASWDLDLWGKNRQRLGQAVSQERAAQADMQQARV 181 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + ++ + T G + + I + Sbjct: 182 TLAASVASTYNQLAQLYAFREIARREIANRQDIGRITDGRVTAGLDTNVERQTAAGNIAT 241 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S++ L+ + + + LLG L + +P NI PADL+ Sbjct: 242 SQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIAMPVLTTGD-TVALPNNI--PADLVAR 298 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R DI ++ ++ + AK++ +P ++L G A + GP ++ Sbjct: 299 RADIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGRFLTSASRQVQLGPAIH 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G ++S ++ + + +T++NA+++V ++SI + Q A++ Sbjct: 359 LPIFDAGALRSQLKGRYADFDLDVANYNQTLINALQDVATQVSSIRSIDQQSGDAQRALD 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ L+++ Y+ G L +L ++ E ++ K + + L A+G G++ Sbjct: 419 ATSKAYQLAVVRYKAGLSPQLQVLTADQNLLAAEQTVTSLKMRRRDMQIGLIKALGGGFD 478 >gi|326334689|ref|ZP_08200896.1| FusA/NodT family multidrug resistance protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693139|gb|EGD35071.1| FusA/NodT family multidrug resistance protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 465 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 111/491 (22%), Positives = 215/491 (43%), Gaps = 74/491 (15%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGN-SKNLINIDTLKWWESFNDTS 60 I + + F+ L L C Y +P++ + F N S + ++ + W F D Sbjct: 5 IYKGFAAAFVALTLTACAGRKTYERPNV-VNEKLFRTDNISTDSLSSANVSWRNIFTDPL 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-----TN 115 L + + AL NL + A +N++S +A L S A FIP L T Sbjct: 64 LQQHISKALSNNLDV-------RVAMQNVVSAQAYLKQSKAA-----FIPTLSVGANYTR 111 Query: 116 STGQLDS-------------------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDI 151 ST L++ W+ D++G+ R S LA +++ A Sbjct: 112 STSSLNAGGGASDRTYNNLFDITGNASWEADIWGKLSAQKRASYASYLATVEAQKA---- 167 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + V++ L +Y E+ + Q ++ K++E + G+T++++ ++EA Sbjct: 168 VQSEVVATLATAYYQLLMLDEQKKVLEQTIEFRTKSLETTKQLKKAGSTTEVATKQIEAL 227 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ + T+ S + I LLG E H +++ S + + G L Sbjct: 228 VYNAQAQLITINNSVWALENTICVLLG----EEPHTIER-STLAEQQFPTQFHQGYAVSL 282 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGP 328 + NRPD+ E L ++ +A+S+ YP+L+L+ G I+ T D F + +F Sbjct: 283 LENRPDVARAELNLRNAFELTNVARSNFYPTLTLSARGGISSTELDTWFSAKSMFANFIA 342 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQ 387 L PI ++ +I++ +++ + + +++ +L+A KEV +A+ + +D+ I K Q Sbjct: 343 GLAQPILNRRQIRTQYEVQKAAQETALLNFKKAILSAGKEVSDAMRQFSSQDEFIQLKTQ 402 Query: 388 H------AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY-- 439 A + K+ M+NY L+++ E ++ +LS+A Q + Sbjct: 403 EMKAYQDATDYSKQLFDSGMVNY-------LEVITAE--VNRLNAELSVANAQFTRMQYG 453 Query: 440 VDLYIAIGSGY 450 + LY A+G G+ Sbjct: 454 ITLYKALGGGW 464 >gi|222035808|emb|CAP78553.1| Multidrug resistance outer membrane protein mdtP [Escherichia coli LF82] gi|312948674|gb|ADR29501.1| putative outer membrane efflux protein MdtP [Escherichia coli O83:H1 str. NRG 857C] Length = 488 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 202/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R A+ N V A+ F S YA + P Sbjct: 79 GSHTLAEAKRREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|320193458|gb|EFW68095.1| Outer membrane component of tripartite multidrug resistance system [Escherichia coli WV_060327] Length = 488 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ FND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQFNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQNKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 + L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETREFLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|289678259|ref|ZP_06499149.1| outer membrane efflux protein [Pseudomonas syringae pv. syringae FF5] Length = 498 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 95/483 (19%), Positives = 214/483 (44%), Gaps = 46/483 (9%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L+GC + P+ + H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGLLAFTLVLSGCIGTHGITPQGSVLHADSLATDQAIQSASLDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISHRF 108 ++ D L++ V +A + ++ A R+ AK E+ SV+ AS+ Sbjct: 65 AYGDAQLDRWVDMATLGSPSLALAAARVRQAKAMAQVAESAESVQV----QGNASLMRHD 120 Query: 109 IPNLKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLN 155 P + G L + +DL+G+ R+ +L + A+ A+L Sbjct: 121 WPEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +YI R+ IA L ++ ++L+ + G + + + + + Sbjct: 181 LQENVVRAYIRLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAQTPLPEA 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L ++ ++ + ++ L G + +Q+ + + L +P +PA+L+ R Sbjct: 241 HRQIDALHEAIALSRNQLAALAGKGPGQGAG-VQRPALSLHTALTLPS--ALPAELLGQR 297 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKL 330 PD+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 298 PDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAI 357 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQ 387 LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 358 SLPIFDAGRLRAELGRASAAYDQAVAHYNQTLVMALKNVSDQLIRRASMDKQQALAAE-- 415 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 -SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALG 474 Query: 448 SGY 450 GY Sbjct: 475 -GY 476 >gi|107022522|ref|YP_620849.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|105892711|gb|ABF75876.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] Length = 525 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 184/426 (43%), Gaps = 39/426 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTIL---------QATERINAAKE-----NILSVRADLF 97 WW ++ D L+ + A N T+ QA R+ + E LS+ + Sbjct: 62 WWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHW 121 Query: 98 PSSYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLN 155 P + + N T N+TG L + +DL+G+ ++ E +L + A AKL Sbjct: 122 PDNV-YYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE 180 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + Sbjct: 181 LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY 240 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 E I + E++ ++ H ++ L G A + + +P L + G+P A Sbjct: 241 ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIK---------RPQLALDAPAGLPSAMPA 291 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHW 324 DL+ RPD+ + I +AK+ YP++ L G +T + N W Sbjct: 292 DLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGW 351 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + GP L LPIF+ G++++ + A + + + +T++ A+K++ + + I Sbjct: 352 TAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKK 411 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVDLY 443 +V + +S LS +R+G +++L ++ + E I +LA ++ L Sbjct: 412 DAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLA-AHAQLM 470 Query: 444 IAIGSG 449 A+G G Sbjct: 471 AALGGG 476 >gi|150006084|ref|YP_001300828.1| outer membrane protein [Bacteroides vulgatus ATCC 8482] gi|149934508|gb|ABR41206.1| outer membrane protein [Bacteroides vulgatus ATCC 8482] Length = 484 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 106/480 (22%), Positives = 200/480 (41%), Gaps = 45/480 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I F +++ C P T LP +F + + I ++ W F DT L + Sbjct: 15 IIGAFCLIMVSCKA-PSLTPTEKIELP-EFYMDRETDSTTISSMSWKTFFPDTLLQSYIA 72 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF--------------- 108 AL N + LQ ERI+ A+ + + L P I RF Sbjct: 73 EALNNNHSFLQTIERISIARSQVRVGKGALLPDLSLGIDGGVQRFGEYTMDGVGNSTTNT 132 Query: 109 --------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 IP+ N L+ W+ +++G+ S+++ + + +A+ +IS+ Sbjct: 133 PDLEKDKHIPDPYRNFNLGLNFQWEANIWGKLTDKKRSTVSRWMQSVEAMRLARTLLISE 192 Query: 160 LIPSYIDARHF-KERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + Y + K+R + IL D Y EL +G ++LS+ + + + Sbjct: 193 VGTHYFELIGLDKQRYVLREAILTARDAYNLTDEL----MKEGEVTRLSVDQFRSRRLKL 248 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 E + E+ I+TLLG +++ S + P + GIP+ L++ R Sbjct: 249 EEMLLANEQQISEKERAIATLLG----RLPFKVKRVSFETACSYEFPTDAGIPSQLLQYR 304 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG-YNTHWSFGPKLY 331 PDI+ E +L S + + A+ +PS+ + G+ A D F + ++ G + Sbjct: 305 PDIKAAELELLASKSDVSAARKAFFPSIVIGGNGGFNAFDLDKWFTAPASLVYNLGAGIT 364 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PIF + I++ A+S + + + +TVL A +EV N +T+ ++ + + Sbjct: 365 APIFKQNTIRALWNDAKSQQRIALLGYHDTVLKAYEEVLNLITASSQMHQRKKLKEEESR 424 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +H +S+ + ++ G LD+L + E++ + K ++ LY A+G G N Sbjct: 425 IHHRSIYNANEMFKVGFAGYLDVLSADERFLDCELERIALNVESCKLHIMLYRALGGGSN 484 >gi|332185072|ref|ZP_08386821.1| outer membrane efflux family protein [Sphingomonas sp. S17] gi|332014796|gb|EGI56852.1| outer membrane efflux family protein [Sphingomonas sp. S17] Length = 258 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 2/197 (1%) Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS--IALTHD 314 P+L P+ IG A L++ RPDIR E+ LA + A IG+A++DLYP +SL GS A + Sbjct: 62 PSLRRPLPIGEGAMLLKRRPDIRRAERLLAAATAGIGVAEADLYPRISLGGSAGTATSVG 121 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 ++ + +S GP + ++ +++ I A + + +VL A+++ E AL+ Sbjct: 122 HALAPSSFGFSLGPLVSWSFPNRKAVRARIDEAGADGDAALAGFDGSVLLALQQTETALS 181 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + + + L+ A K+ + R GR LD+L+ + + A + LS A+ Sbjct: 182 AYARSRDRLDALERAAGAAGKASGDAEKLQRFGRTPFLDVLNAQASYADAQTSLSSARAS 241 Query: 435 LAKSYVDLYIAIGSGYN 451 L +DL++A+G G+ Sbjct: 242 LVDRQIDLFLALGGGWE 258 >gi|317503927|ref|ZP_07961935.1| FusA/NodT family multidrug resistance protein [Prevotella salivae DSM 15606] gi|315664953|gb|EFV04612.1| FusA/NodT family multidrug resistance protein [Prevotella salivae DSM 15606] Length = 466 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 107/421 (25%), Positives = 183/421 (43%), Gaps = 42/421 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W F D+ L L++ L N +L A + A+ + + + PS +A I + Sbjct: 63 WRSVFTDSHLQALIEKGLAHNPNLLNAALNVKMAEAQLQAAKLSFLPS-FAFTPQGTISS 121 Query: 112 LKTNSTGQL-----DSDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 N ++ ++ W +DLFG +R + +L L S QV + + +I+ + Sbjct: 122 WDGNKANKIYSLPINASWNVDLFGTLLSSKRATQVAL--LQSKDYQVSV-QTKLIANIAN 178 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHL-KFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y +++ + + + L K ++ L K ++ + EA S+ + Sbjct: 179 MYYTLLMLDKQMELVNDMEKLTKDTWDIMTLQKDAIVGVRSTAVQRAEANYYSVLTQKAD 238 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIR 279 +++ R + +S L+G A Q S + +P N G+ L++NR D+ Sbjct: 239 IKRQIRETENALSLLVGQQA-------QTISRGNLDDQQLPANFSTGVGLQLLQNRADVH 291 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIF 335 E LA + A+S YP L++N S A T+ PG + G L PIF Sbjct: 292 AAEMALAQCFYNVETARSRFYPVLNINASGAFTNSGGLGIVNPGKWLLTAVGS-LTQPIF 350 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTK----LQH 388 GK+ + ++ A++ ++ + TWQ VL A EV NAL N E KI K L+ Sbjct: 351 QNGKLVAGLKVAKAQYEQAFNTWQNAVLTAGSEVSNALVQYNSAEEKSKIQAKQIEVLKK 410 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 VE K+ M+ + Y + + +L+ E +KV D S K Q + V+LY A+G Sbjct: 411 NVEDTKELMASAGSTYLEVITAQSSLLNTE--LSKVADDFS--KMQ---AVVNLYSALGG 463 Query: 449 G 449 G Sbjct: 464 G 464 >gi|120597605|ref|YP_962179.1| RND efflux system outer membrane lipoprotein [Shewanella sp. W3-18-1] gi|120557698|gb|ABM23625.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella sp. W3-18-1] Length = 471 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 99/454 (21%), Positives = 199/454 (43%), Gaps = 24/454 (5%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 ++ + LL GC G PL +P+ + + +D WW+ F LNKL Sbjct: 17 IAVGVALLGGC--GSFMRSDFEPLALTIPSHWQHTQVNEQVRVD--PWWQQFQQPDLNKL 72 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNST----GQ 119 V L N + AT + A+ + L+P +++S R P ST + Sbjct: 73 VSQVLSSNNDLALATLTLRKARLQAGLAQDALYPQLSSNLSASRSNPLDGGESTKSYQAK 132 Query: 120 LDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L +++DL+G+ ++ + L SA + + ++++ Y + +RI+++ Sbjct: 133 LSVSYEVDLWGKVSAEMDQAQWSALASAEDRESTTQ-SLVATTASLYWKMGYLNQRIALS 191 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + +D ++ + L+ ++ GA +++++++ + + E+ L + + ++ LL Sbjct: 192 SRSIDHSRQTLALTQRQYDSGAVTQVNVLEAKRSLAGQEASHSQLIQQLTEAGNALAILL 251 Query: 238 GY-PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 P F+ N P++ +P I +G+PADL+ RPD++ +L ++A Sbjct: 252 NQAPGEAFVEI------NALPDVAVPEIAVGMPADLLVRRPDVKASLYQLRSALASKDAT 305 Query: 296 KSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + +PSLSL GS+ T + N S G L LP +++ N AE Q Sbjct: 306 YTRYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIAEIDYQTA 365 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + +++T+ +A ++V+NA+++ + KLQ ++ YR G + D Sbjct: 366 VVNYRKTLYSAFEDVDNAISAKQQFAYQGDKLQQQYNAAVAVEAIYESQYRHGAIGIQDW 425 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + E L + + LY A+G Sbjct: 426 INAQENRRAAEASLLENRYNQLTAQATLYQALGG 459 >gi|330987403|gb|EGH85506.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 462 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 93/440 (21%), Positives = 196/440 (44%), Gaps = 33/440 (7%) Query: 33 PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSV 92 P +++ S D +WW+ F LN+L++ A + + + A R+ A+ + Sbjct: 31 PARWAFAQSAAAQRSDA-RWWQQFGSPQLNRLIEQASRDSHEVAAAMARVRQAQATAIIG 89 Query: 93 RADLFPS---SYASISHRFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIES 137 A L P ++F+ N N T L + +++D +G +S Sbjct: 90 GAPLLPELAFDLRGERNKFVRNSDRKANPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDS 149 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 +L +L ++ +L ++ + Y +E+ IA L + + L ++ Sbjct: 150 ALRSLRASEFDQATVELTLLGNVADRYAQTLAAREQGRIAELNLANAQSVLRLVQTRYDS 209 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G+ + L L + + + + + ++P +++ + +++ LLG P + + F Sbjct: 210 GSATALELAQQKNLVATQQRELPRVQQLANEQLISLAALLGQP----VQNLNLGDQAFAT 265 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + I G+P++ + RPD+ E +LA + A + +A++ + P L+L+ + + Sbjct: 266 LNWPDIGPGLPSERLTRRPDLAKAEAELAAAQANVTVARAAMLPKLTLSARLGTEATRAE 325 Query: 318 PGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI Sbjct: 326 DWLRAPFSSLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSI 385 Query: 377 NE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSI 430 D++ + H EL + + +++ Y +G LL +L+ +R V V L + Sbjct: 386 QGLDQQ---RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLETQRTLYQAQDVSVQLRL 442 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A+ Q + + LY A+G G+ Sbjct: 443 ARLQ---ASIALYKALGGGW 459 >gi|323182190|gb|EFZ67600.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli 1357] Length = 488 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R A+ N V A+ F S YA + P Sbjct: 79 SSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|24115345|ref|NP_709855.1| putative outer membrane efflux protein MdtP [Shigella flexneri 2a str. 301] gi|30064668|ref|NP_838839.1| putative outer membrane efflux protein MdtP [Shigella flexneri 2a str. 2457T] gi|110807902|ref|YP_691422.1| putative outer membrane efflux protein MdtP [Shigella flexneri 5 str. 8401] gi|73621213|sp|Q83P87|MDTP_SHIFL RecName: Full=Multidrug resistance outer membrane protein mdtP; Flags: Precursor gi|24054649|gb|AAN45562.1| putative enzyme [Shigella flexneri 2a str. 301] gi|30042927|gb|AAP18650.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|110617450|gb|ABF06117.1| putative enzyme [Shigella flexneri 5 str. 8401] gi|281603451|gb|ADA76435.1| Multidrug resistance outer membrane protein mdtP precursor [Shigella flexneri 2002017] gi|313648736|gb|EFS13176.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Shigella flexneri 2a str. 2457T] gi|332752010|gb|EGJ82403.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri 4343-70] gi|332752179|gb|EGJ82571.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-671] gi|332764771|gb|EGJ95000.1| outer membrane factor of efflux pump [Shigella flexneri 2930-71] gi|332998158|gb|EGK17762.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri VA-6] gi|332999157|gb|EGK18744.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-218] gi|333014242|gb|EGK33598.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-304] Length = 488 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 97/477 (20%), Positives = 207/477 (43%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + +H VE + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREM--QAEH-VEATR 423 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + Y++G S L + E+ L + + + L ++G GY Sbjct: 424 FTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|301021637|ref|ZP_07185629.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 69-1] gi|300397926|gb|EFJ81464.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 69-1] Length = 488 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QISETRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|167839749|ref|ZP_02466433.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 257 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%) Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THD 314 NL I G+P+DL+ RPDI E+ L + A IG A++ +P +SL G+ T Sbjct: 28 NLLTDIPAGLPSDLLTRRPDIMQAEQTLRAANANIGAARAAFFPKISLTGAFGTASPTLG 87 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 F WSF P + LPIF+ G+ +N+ A + + +++ + +A +EV + L Sbjct: 88 GLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLA 147 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + + + L+ ++ LS + Y+ G S L +L + DL A++Q Sbjct: 148 ARGTYDQQIAALERNEHAQQRRYDLSDLRYKNGVDSYLSVL-------TAQTDLYSAQQQ 200 Query: 435 LAKS-------YVDLYIAIGSGY 450 L + VDLY A+G G+ Sbjct: 201 LISARLARWTNLVDLYRALGGGW 223 >gi|167587235|ref|ZP_02379623.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 220 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 3/194 (1%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFP 318 P+ G P+ L+ RPDIR E +L + A+IG A++ +P ++L GS++ F Sbjct: 22 PVAPGAPSALLERRPDIRQAEARLKAANAQIGAARAAFFPRITLTTDIGSVSDAFSGLFA 81 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 W+F P+L LPIF G+ ++N+ A + ++++V A +EV +A + + Sbjct: 82 SGTGVWTFAPRLTLPIFAGGRNRANLDVATARKHIAVAEYEKSVQVAFREVADAFAARDW 141 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + Q E + L+ Y G + L++LD +R+T + +L ++ + Sbjct: 142 IDAQLAAQQAVYEADGARLKLAERRYGSGVATYLELLDAQRSTFESGQELIRLQQLRLGN 201 Query: 439 YVDLYIAIGSGYNP 452 + LY A+G G++P Sbjct: 202 AITLYRALGGGWSP 215 >gi|71278889|ref|YP_269104.1| RND family efflux transporter outer membrane lipoprotein [Colwellia psychrerythraea 34H] gi|71144629|gb|AAZ25102.1| efflux transporter, RND family, outer membrane lipoprotein subunit [Colwellia psychrerythraea 34H] Length = 479 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 27/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW +FN+ L V+ + + N ++ R+N + + V+A P S+S + N Sbjct: 62 WWTNFNEPQLTYWVETSFKNNPSLQATFSRLNQTQAKLNIVKASNNPDLNLSLSSKVKRN 121 Query: 112 LKTNSTGQ-------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPS 163 N+T L + W+IDL+G+ E A +++ ++ DI+ K N+I+ + S Sbjct: 122 KNLNTTQNDNYQVVGLSASWEIDLWGKLNAGEDK-ALWENSASKNDISIKANLIAANVSS 180 Query: 164 -YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ E+I + Q ++ +++ + G T + + + ++S+ + Sbjct: 181 AWVGWMVETEKIKLLTQQSKRTEQGLKIIQRRVALGKTGRSDAWQQQGLLESLTTLTNKA 240 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + ++ G A + Q + L IP++ GI ++ RPDI+ Sbjct: 241 IAKSALQKQKLALWSGTLANQLPKSPQGKLPTL---LSIPVS-GIELKALKYRPDIQKSY 296 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 KL + A++ IA ++ +P L+L S + T+ N+ F + S G L +PI D G+ Sbjct: 297 AKLQAADAEVAIAVAEQFPQLTLRASYSSTNQNAKSIFSDWLGDLSAG--LIMPIIDYGQ 354 Query: 340 IKSNIRRAE---SSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 K +++ + + Q Y+ WQ+ AI EVE AL NE ++I L +EL KK Sbjct: 355 RKQTVKQKKYNLKALQYDYLQKWQQ----AIFEVEEALIIANEYQQITISLALQLELAKK 410 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L Y G+ L +L + +T K+E L +K +S + LY AI G Sbjct: 411 IQQLKKRYYLNGQAQYLQLLQAQDSTLKLERQLIDSKHAQLESRLSLYSAISHG 464 >gi|320174428|gb|EFW49572.1| Outer membrane component of tripartite multidrug resistance system [Shigella dysenteriae CDC 74-1112] Length = 488 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P+ Sbjct: 79 GSHTLAEAKLQEEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PS 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIHSIQLMKSLGGGYQ 480 >gi|191168774|ref|ZP_03030551.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli B7A] gi|190901201|gb|EDV60973.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli B7A] Length = 488 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVHKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|320183134|gb|EFW57994.1| Outer membrane component of tripartite multidrug resistance system [Shigella flexneri CDC 796-83] Length = 488 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P+ Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PS 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGIAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIHSIQLMKSLGGGYQ 480 >gi|307728678|ref|YP_003905902.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307583213|gb|ADN56611.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 525 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 108/472 (22%), Positives = 215/472 (45%), Gaps = 36/472 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS-IGNSKNLINID----TLKWWESFNDT 59 RAI I LLA C Y H Q +G +++L + W+E F DT Sbjct: 17 RAISVAAIGLLAACA---NYAGIHGDQQMVQAQQLGTARSLPQEQGRWPSADWFEQFGDT 73 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------------SSYASISH 106 L LV ALQ + T+ QA R+ AA+ + ++ P SS A + Sbjct: 74 QLKALVAEALQSSPTLDQARARVAAAQAYSETAKSRTLPRVDADYTLTRQQYSSTALVPP 133 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + +T + G L + + +DL+G+ R + +++ ++ A ++ KL + + + +Y Sbjct: 134 PYAGSWQTENKGLLSASYDLDLWGKNREALREAVSQQAASKADAEVVKLTLETSIARTYN 193 Query: 166 D-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + AR + R IA Q + ++ ++ + G +++ +A + + +++ L+ Sbjct: 194 ELARLYALR-DIAQQEVARREQIDRITAGRIATGLDTEVERKTAQANLATSRANVSALDG 252 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 S + ++ LLG L + + + + +P N+ PADL+ RPDI + Sbjct: 253 SILTTRYQLAALLGKGPDRGLA-IARPALGAGDEVRLPDNL--PADLLSRRPDIVAARWR 309 Query: 285 LADSVA-KIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + D++A I AK++ YP ++L+ +I L + S GP ++LPIFD G + Sbjct: 310 V-DAIAHGINEAKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASVGPAIHLPIFDAGAL 368 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ ++ + T+ +T+++A+ V L I+ + Q A + + + L+ Sbjct: 369 RAQLKGRYADFDYAVATYNQTLISALSGVATQLAQIHSSDAQLGDAQAAQQAARDADRLA 428 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + Y+ G + L +L+ + D +I Q+ + ++L ++G GY Sbjct: 429 TVQYQAGLTNQLTVLNAD--VTAFNADEAIVNLQMTRRDQQIELASSLGGGY 478 >gi|221213859|ref|ZP_03586832.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD1] gi|221166036|gb|EED98509.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia multivorans CGD1] Length = 490 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 36/424 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERIN----------AAKENILSVRADLFPSSY 101 WW ++ D L+ LV A+ N I A R + A + +V AD + + Sbjct: 58 WWRAWRDPQLDTLVADAIAGNPAIRVAQARADRFVELARIAGATRYPSAAVDADFSRARF 117 Query: 102 ASISHRFIPNLKT---NSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVI 157 A + P T NS G D + +DL+G+ R E +LA++ +A A A+L + Sbjct: 118 ARYASPSPPGGNTVWNNSVGA-DLRYALDLWGKHRSEHEGALADVQAAAADARAARLMLE 176 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +YI A+ F +R +A L + + + + G S+ L + I + Sbjct: 177 TAVVRTYIVFAKTFDQR-DVALATLKRQQDIVGIVERRARAGLASRFELTQASTPIAATR 235 Query: 217 SDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 + I L++ + + ++ L G P + + + + +P N+ PA+L+ +R Sbjct: 236 AQIEALDRQIAVLRNELAVLAGRGPGAG--APLARPALRLDVPVALPANL--PAELVGHR 291 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--------NTHWSFG 327 PD+ ++ + I AK+D YP++ L S L +F G+ TH FG Sbjct: 292 PDVVAARWRIESMSSAIRAAKADFYPNIDLIASAGLAS-AAFGGFFTLVNNDAMTH-RFG 349 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + LPIFD G+ + A + T+ + VL A ++V N + S+ + ++ Sbjct: 350 AAISLPIFDGGRRQGRYGAAVADYDVAVETYNQAVLGAFRDVANQIESLQSLARQQADVE 409 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIA 445 + + ++++ +M YR G L +L E T +++ S+A + A+ ++ L A Sbjct: 410 ASADTARRAVDYAMQGYRAGLTDYLTVLSTE--TERLQAQQSLADVRAARLDAWAQLMAA 467 Query: 446 IGSG 449 +G G Sbjct: 468 LGGG 471 >gi|323171507|gb|EFZ57153.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli LT-68] Length = 493 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R A+ N V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSHLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|300916958|ref|ZP_07133658.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 115-1] gi|281181170|dbj|BAI57500.1| conserved hypothetical protein [Escherichia coli SE15] gi|300415786|gb|EFJ99096.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 115-1] Length = 488 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPQVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|260858190|ref|YP_003232081.1| putative outer membrane factor of efflux pump [Escherichia coli O26:H11 str. 11368] gi|257756839|dbj|BAI28341.1| predicted outer membrane factor of efflux pump [Escherichia coli O26:H11 str. 11368] gi|323155870|gb|EFZ42038.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli EPECa14] Length = 488 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALLQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVALFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFQGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|74314572|ref|YP_312991.1| putative outer membrane efflux protein MdtP [Shigella sonnei Ss046] gi|157158827|ref|YP_001465584.1| putative outer membrane efflux protein MdtP [Escherichia coli E24377A] gi|157163550|ref|YP_001460868.1| putative outer membrane efflux protein MdtP [Escherichia coli HS] gi|193063041|ref|ZP_03044133.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli E22] gi|194426877|ref|ZP_03059430.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli B171] gi|209921568|ref|YP_002295652.1| putative outer membrane efflux protein MdtP [Escherichia coli SE11] gi|218556638|ref|YP_002389552.1| putative outer membrane efflux protein MdtP [Escherichia coli IAI1] gi|218697789|ref|YP_002405456.1| putative outer membrane efflux protein MdtP [Escherichia coli 55989] gi|256019730|ref|ZP_05433595.1| putative outer membrane efflux protein MdtP [Shigella sp. D9] gi|260846874|ref|YP_003224652.1| putative outer membrane factor of efflux pump [Escherichia coli O103:H2 str. 12009] gi|293476384|ref|ZP_06664792.1| multidrug resistance outer membrane protein mdtP [Escherichia coli B088] gi|300824660|ref|ZP_07104767.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 119-7] gi|300906403|ref|ZP_07124101.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|300924352|ref|ZP_07140329.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 182-1] gi|301302772|ref|ZP_07208901.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|301330538|ref|ZP_07223149.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 78-1] gi|307312077|ref|ZP_07591714.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli W] gi|309795891|ref|ZP_07690305.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 145-7] gi|331670949|ref|ZP_08371783.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA271] gi|331680214|ref|ZP_08380873.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H591] gi|332280866|ref|ZP_08393279.1| outer membrane factor of efflux pump [Shigella sp. D9] gi|73858049|gb|AAZ90756.1| putative enzyme [Shigella sonnei Ss046] gi|157069230|gb|ABV08485.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli HS] gi|157080857|gb|ABV20565.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli E24377A] gi|192931300|gb|EDV83902.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli E22] gi|194415213|gb|EDX31482.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli B171] gi|209914827|dbj|BAG79901.1| conserved hypothetical protein [Escherichia coli SE11] gi|218354521|emb|CAV01394.1| outer membrane factor of efflux pump [Escherichia coli 55989] gi|218363407|emb|CAR01061.1| outer membrane factor of efflux pump [Escherichia coli IAI1] gi|257762021|dbj|BAI33518.1| predicted outer membrane factor of efflux pump [Escherichia coli O103:H2 str. 12009] gi|291320837|gb|EFE60279.1| multidrug resistance outer membrane protein mdtP [Escherichia coli B088] gi|300401851|gb|EFJ85389.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|300419442|gb|EFK02753.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 182-1] gi|300522843|gb|EFK43912.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 119-7] gi|300841992|gb|EFK69752.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|300843521|gb|EFK71281.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 78-1] gi|306907884|gb|EFN38385.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli W] gi|308120552|gb|EFO57814.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 145-7] gi|315063404|gb|ADT77731.1| predicted outer membrane factor of efflux pump [Escherichia coli W] gi|315254764|gb|EFU34732.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 85-1] gi|323162170|gb|EFZ48035.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli E128010] gi|323946217|gb|EGB42251.1| NodT family protein efflux transporter [Escherichia coli H120] gi|324017190|gb|EGB86409.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 117-3] gi|324118654|gb|EGC12546.1| NodT family protein efflux transporter [Escherichia coli E1167] gi|331061863|gb|EGI33788.1| multidrug resistance outer membrane protein MdtP [Escherichia coli TA271] gi|331071677|gb|EGI43013.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H591] gi|332103218|gb|EGJ06564.1| outer membrane factor of efflux pump [Shigella sp. D9] Length = 488 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|295689184|ref|YP_003592877.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295431087|gb|ADG10259.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 474 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 91/446 (20%), Positives = 174/446 (39%), Gaps = 23/446 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 V L GP + P P F +WW F D L+ L+ A + + Sbjct: 32 VALPAAYAGPASGQAQDPKAPQAF------------IERWWAGFGDPQLDALIAQAFRSS 79 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDSD--WKID 127 A + A+ + P S+S + P LD D W+ID Sbjct: 80 PDARAAQASLAEARAVRQGALSGFGPQGTPSVSALRQKTRPGEGRADLEVLDWDVSWEID 139 Query: 128 LFGQRRHIESSLANLDSAYAQV-DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 + G+R +S +A A + ++++ + + + AR + + A + + Sbjct: 140 VIGRRGAARTSADATLAAAAFDFEATRVSLAANVAQALFQARALETQAREAEETARIAGD 199 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 ++ LK +G S+ AE+ S ++ L+ ++ + L+G A + L Sbjct: 200 LARVAKLKADRGILSQADAASFRAELASSKAQAAQLQAQAKVQRRALMVLVGQ-ARDPLD 258 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + Q + +P P + P L+ RPD+R + + + ++ A+ P+LSL Sbjct: 259 ALPLQHPDLEPP--TPPTLA-PGQLLIRRPDLRRAQANVEAAAGRVVSARLAQLPTLSLI 315 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 S+ T + P + W+ G L P+ D ++++ R + A+ + ++ V A Sbjct: 316 PSLTATRPQAGPSVSV-WTLGANLAAPVLDLPRLRAQSRLRSAQAEAAVLAYERAVGEAY 374 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 E ENAL + D++ +L A K + +R G +L ER + Sbjct: 375 AETENALVTFGADRERFVELAEAERQAKAAFDAQDQGFRAGYVDATALLQTERVWRQARA 434 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYNP 452 L + + V + ++G G++P Sbjct: 435 SLIAGRAAVLNDAVLAFKSLGGGWSP 460 >gi|300773464|ref|ZP_07083333.1| FusA/NodT family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759635|gb|EFK56462.1| FusA/NodT family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] Length = 474 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 106/483 (21%), Positives = 225/483 (46%), Gaps = 45/483 (9%) Query: 1 MNILRAIFSLFIV--LLAGCTVGPEYTKPHMPL-LPTQFSIGNS--KNLINIDTLKWWES 55 MNI ++F++ +L+GC E H+P+ LP + ++ + I ++ W E Sbjct: 1 MNIKFYSVTIFLITLILSGCKT--ERLATHVPVTLPDNYRDSDALKTDTNTIGSIPWREF 58 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRF 108 F D L +L+ A++QN+ + A + I A++ + +A P ++ + S+ Sbjct: 59 FKDAMLQQLIDSAIRQNMDMQLAVKNIEASRLLLSQAKAANLPNLQLRVNATSTNPSNNS 118 Query: 109 IPNLKTNS----------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 + L N T L W+ D++G+ I++ A ++Y Q + A+ V + Sbjct: 119 MNGLSLNQFLGANHVEDYTAALSLSWEADIWGK---IKNQKAAALASYLQTEEARKVVQT 175 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELS-------HLKFTQGATSKLSLVKLEAE 211 +L+ + ++ + +Q+ D+ KKN+ LS ++ G S L++ ++ A+ Sbjct: 176 QLVSQVAQGYY---QLLMLYQLQDIAKKNLRLSDSTLRIVQYQYEVGDISSLAVEQVAAQ 232 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + IP E+ ++ + IS L G + H + + L + +GIPA + Sbjct: 233 RLAAAALIPDFEQQVQIQENAISVLSG----QLPHAITTTATLNTITLPEHLQVGIPAAM 288 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG--- 327 + RPD++ E +A + A AK+ +YPSL ++ + S +N S FG Sbjct: 289 LSRRPDVKSAELAIAAAQANQQTAKASMYPSLVISADAGVNAFKSSNWFNLPASLFGVVA 348 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + PI + ++++ + ++ I ++++V+ A+ EV +A+ SI + K+ Sbjct: 349 GSITQPILQRKQLRTQYEVSRVEQEKSVIRFKQSVITAVGEVSDAMISIRKLKEKEVIAS 408 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ + + + G + L+++ + + E++L+ K+ + VDLY A+G Sbjct: 409 DRTNRLRNAIGHADLLFETGMATYLEVITAQSNVLQSELELAQLKKAELAAIVDLYRALG 468 Query: 448 SGY 450 G+ Sbjct: 469 GGW 471 >gi|193067910|ref|ZP_03048876.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli E110019] gi|192958885|gb|EDV89322.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli E110019] Length = 488 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|331681014|ref|ZP_08381651.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H299] gi|331081235|gb|EGI52396.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H299] Length = 488 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLLEEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRTASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|270157946|ref|ZP_06186603.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|289163785|ref|YP_003453923.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269989971|gb|EEZ96225.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|288856958|emb|CBJ10772.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 475 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 115/485 (23%), Positives = 213/485 (43%), Gaps = 61/485 (12%) Query: 7 IFSLFIVLLAGCT---VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 + LF +LL C + PE K + P T+ I + + + WW+ D L++ Sbjct: 8 LLYLFTMLLGSCCKNCIVPE--KVNYPK-STRSGIKYVNDETVLSQVAWWKKLKDPELDQ 64 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHR-----FIPNLKTN 115 L+ AL N I + I A+ + + + P+ S + R P + Sbjct: 65 LIYQALTSNYQIQSSYATIEQAQAQLKAAQYAWIPTLDGSTGGFAGRTWNSHITPQGRLA 124 Query: 116 STGQLDSD----------------WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 T L SD + +++ I+++ A+LD AQ KL +IS+ Sbjct: 125 KT-PLFSDLSNLRFKEYNAGFVPGYTVNILTNINDIKAAQASLDLQKAQTQATKLGIISQ 183 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y +E++++ + KK +L ++F +GA+ +L ++ ++ E+ I Sbjct: 184 MSGAYFMLLSQREQLAVEKTLCHDLKKLHQLEQVRFQKGASDLETLTNIDQQLAQEETKI 243 Query: 220 PTLEKSFRMNVHNISTLL-GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 P +E + + I LL G P + NL I +P+ +++NRPDI Sbjct: 244 PQIENVVAQSENTIHFLLNGNPGP-----ISTSRTLLSLNLENIIPKHLPSSVLKNRPDI 298 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTH-WSFGPKLYL 332 + + ++IG+A S +P++SL G S+ L+H +TH W + Sbjct: 299 MIALNHVKIAYSQIGVAYSVFFPTISLTGLLGGTSVDLSH---LLKLSTHIWIAQAAASM 355 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ-HAVE 391 IF+ + N++ A+++ + Y + ET+ A +V+NAL + E K ++ LQ H Sbjct: 356 KIFNASSYQ-NVKSAKANFKATYYDYLETLHAAFADVDNAL--MTEQKSRLSYLQAHKGY 412 Query: 392 L-HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI-----AKRQLAKSYVDLYIA 445 L KK ++++ Y+ G +++ AK+ +D S+ K QL V +Y A Sbjct: 413 LAAKKGYAIALAQYKAGAKDYRSVVN-----AKINLDRSMLNLIQEKAQLLDGMVQVYNA 467 Query: 446 IGSGY 450 + GY Sbjct: 468 VAGGY 472 >gi|330988343|gb|EGH86446.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 493 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 96/479 (20%), Positives = 206/479 (43%), Gaps = 41/479 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 ILR ++ + F ++L+GC +G KP H L T +I ++ + +WW Sbjct: 5 ILRGLWPVGILAFTLILSGC-IGTHGIKPQGSLLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN+ V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNRWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKL 154 P ++ L ++ +DL+G+ R+ +S LD A+ A+ A+L Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLNYALDLWGRERN--ASEQALDLAHVSAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIQLALEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKMPS--ALPAELLGR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G++++ + +A ++ + + +T++ A+K + + L K + Sbjct: 357 ISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAES 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 417 VASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|304411148|ref|ZP_07392763.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS183] gi|307306443|ref|ZP_07586186.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica BA175] gi|304350341|gb|EFM14744.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica OS183] gi|306910734|gb|EFN41162.1| RND efflux system, outer membrane lipoprotein, NodT family [Shewanella baltica BA175] Length = 483 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 97/462 (20%), Positives = 206/462 (44%), Gaps = 30/462 (6%) Query: 8 FSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +L I LL+GC + ++ P + + P Q+ + +D WW+ F+ L+KLV Sbjct: 21 MALGITLLSGCGSFMRSDFEPPALAI-PEQWQNTTVNEQVKVD--PWWQQFHQPELDKLV 77 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPNLKTNST----GQL 120 L N + AT + A+ R DL+P A++ + R P ++T L Sbjct: 78 SQVLSTNNDLTLATLTLRKARLQAGLTRDDLYPQLSANLGASRNQPLDGGDATKSYQANL 137 Query: 121 DSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAK------LNVISKLIPSYIDARHFKER 173 +++DL+G+ AN+D A +A + A+ ++++ Y + +R Sbjct: 138 SVSYEVDLWGKVS------ANIDQAQWAALASAEDRESTTQSLVATTASLYWQIGYLNQR 191 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + ++ + + K+ + L+ ++ GA +++++++ + + E+ L + + + + Sbjct: 192 VDLSQKSIAYSKQTLALTQRQYDSGAVTQVNVLEAQRSMAGQEAAHSQLIQQLTVAKNAL 251 Query: 234 STLLGY-PATEFLHYMQKQSNNFQ----PNLYIP-INIGIPADLIRNRPDIRYQEKKLAD 287 + LL PA + + + P++ +P +++G+PADL+ RPD++ +L Sbjct: 252 AILLNQAPAADPAQSLASGETWVEIKQLPDVAVPDVSVGVPADLLVRRPDVKASLYQLRS 311 Query: 288 SVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++A + +PSLSL G I T + N S G L LP +++ + Sbjct: 312 ALASKDATYASYFPSLSLTGGIGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQISNDI 371 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A+ Q + +++T+ +A ++V+NA+++ + + KL ++ YR Sbjct: 372 ADIDYQTAVVNYRKTLYSAFEDVDNAISAKQQYRYQGEKLAQQFSAAAAVEAIYESQYRN 431 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G + + +D + E L + + LY A+G Sbjct: 432 GAIGIQNWIDAQENRRSAEAALLDNRYNQLTAQATLYQALGG 473 >gi|303249586|ref|ZP_07335793.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251787|ref|ZP_07533689.1| hypothetical protein appser6_3080 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651660|gb|EFL81809.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860694|gb|EFM92705.1| hypothetical protein appser6_3080 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 464 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 86/393 (21%), Positives = 176/393 (44%), Gaps = 62/393 (15%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW+ +ND+ LN LV+ A+ NL + ++ +N A N V A+L P+ Sbjct: 52 QWWQGYNDSQLNSLVEQAIANNLDLAKSAIAVNRALYNANLVGANLVPTFSGSGSSSAAK 111 Query: 100 SYASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 S S++ + T S T + +DL+ QR +S A + D+ +L++ Sbjct: 112 GVGSTSNQISTGISTISHTASFKLSYTLDLW-QRLADAASAAEWEHKATVEDLKATRLSL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ ++ +Y ++K+ I++ + ++ Y++ + + + K+ GA +L++ + + + Sbjct: 171 LNSVVSTYYQIAYYKDAIAVIERTINNYQQILTILNNKYAAGAIDRLAVEQAQQATLNAR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------------I 263 + + + + + + LL N +PN +P I Sbjct: 231 NSLISERTNLKTAEQTLRNLL----------------NLKPNQALPTRYPSILGVKLQGI 274 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-------HDNS 316 ++ +P I NRPD+ + +L + + + +P+++L GSI+ + DN Sbjct: 275 DLNVPVSAIANRPDVVARLNRLQSAFKSLTATEKSWFPTVTLGGSISASASKVANISDN- 333 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 P N SF LP D ++K+N++ +ES + +++TV +A+ E++ + Sbjct: 334 -PVGNGVISFD----LPFLDWNRVKNNVKISESDYMTAKLNYEQTVTSALNEIDQHYYAY 388 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + LQ A E H K +S NY + RY Sbjct: 389 QQSLSSYATLQQAYE-HDKRIS----NYYKNRY 416 >gi|301632826|ref|XP_002945481.1| PREDICTED: solvent efflux pump outer membrane protein srpC-like, partial [Xenopus (Silurana) tropicalis] Length = 242 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 6/245 (2%) Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A + + E+ IPTL+ + I TL G A + Q+ P + P+ IG P Sbjct: 1 ALLAATEARIPTLQTAEARAGRRILTLTGQRAENAPFDLSPQA---LPAIAKPLQIGDPR 57 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTH-WSF 326 +L+R RPD+ E++LA + A +G+A +DL+P +SL+G + T + TH W+ Sbjct: 58 ELLRRRPDVAAAERRLAAATATVGVATADLFPRVSLSGFLGFTAGRGSQIGSSATHDWAL 117 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 GP + P+FD G +++ +R AE+ A ++ VL A++E NA + + + + L Sbjct: 118 GPSITWPVFDLGSVRARLRYAEAGADGALAHYERQVLLALEESANAFSDYGKRHERLHAL 177 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + +++ ++ YR+G + L LD ER + + A+ L V +Y A+ Sbjct: 178 IRQAQASQRAAQMAEFRYREGAATHLVWLDAEREKLAAQDAQAQAEIDLYHGIVAIYKAL 237 Query: 447 GSGYN 451 G G+ Sbjct: 238 GGGWQ 242 >gi|215489430|ref|YP_002331861.1| putative outer membrane efflux protein MdtP [Escherichia coli O127:H6 str. E2348/69] gi|312965696|ref|ZP_07779925.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 2362-75] gi|215267502|emb|CAS11956.1| predicted outer membrane factor of efflux pump [Escherichia coli O127:H6 str. E2348/69] gi|312289670|gb|EFR17561.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 2362-75] Length = 488 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ LV+ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALVQQTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGIRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|167922160|ref|ZP_02509251.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei BCC215] Length = 619 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|26250896|ref|NP_756936.1| putative outer membrane efflux protein MdtP [Escherichia coli CFT073] gi|227886882|ref|ZP_04004687.1| outer membrane efflux protein MdtP [Escherichia coli 83972] gi|300988463|ref|ZP_07178701.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 45-1] gi|301047703|ref|ZP_07194765.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 185-1] gi|73621212|sp|Q8CVH8|MDTP_ECOL6 RecName: Full=Multidrug resistance outer membrane protein mdtP; Flags: Precursor gi|26111328|gb|AAN83510.1|AE016771_21 Hypothetical outer-membrane lipoprotein yjcP precursor [Escherichia coli CFT073] gi|227836224|gb|EEJ46690.1| outer membrane efflux protein MdtP [Escherichia coli 83972] gi|300300449|gb|EFJ56834.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 185-1] gi|300407461|gb|EFJ90999.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 45-1] gi|307556250|gb|ADN49025.1| RND efflux system [Escherichia coli ABU 83972] gi|315294006|gb|EFU53358.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 153-1] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDSLIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|325109639|ref|YP_004270707.1| RND efflux system, outer membrane lipoprotein, NodT family [Planctomyces brasiliensis DSM 5305] gi|324969907|gb|ADY60685.1| RND efflux system, outer membrane lipoprotein, NodT family [Planctomyces brasiliensis DSM 5305] Length = 536 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 93/417 (22%), Positives = 178/417 (42%), Gaps = 30/417 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW+ F+D +LN V+ +L N T+ A R AA+ +D FP + F Sbjct: 118 WWQEFDDPNLNFQVEQSLSGNFTLDAALHRFEAARAAARREASDFFPD--VDLFTEFDSV 175 Query: 112 LKTNSTGQLD------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 ++T+ Q D ++ +DL+G+ +E++ D+ D L + ++ +Y Sbjct: 176 IQTDGLDQTDFVFGAEMNYTVDLWGEIESRVEAARFRADATQEDYDALALALSAEAAGTY 235 Query: 165 IDARHFKERISIAHQIL---DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 K +S+ Q L KN E +F+ G +++ + S Sbjct: 236 FSLMQAKAELSLLKQQTLSNSLALKNQEY---RFSVGLIRSPDVLRQRQLVDSTREQEVI 292 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-----PNLYIPINIGIPADLIRNRP 276 E + H ++ L G P Q+ F+ P+L G+P+DL+R RP Sbjct: 293 AENRITILQHQLAVLQGRP---------PQTTRFEVDETLPDLPPLPQTGLPSDLVRRRP 343 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIF 335 D+R L + + A + YP L+L ++ + T F + +L P+ Sbjct: 344 DVRSAYFALQAADRDLAAAITQQYPRLNLRATVVSATESAEFLFKEWILAMSSQLIGPLI 403 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G+ ++ + R + +++ +++ VLNA +EVE+AL K+ + L+ + L ++ Sbjct: 404 DGGQRRAEVHRNNALVRQRLDEYEQVVLNAFQEVEDALVRERNLKRRIELLESQLVLARE 463 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S Y LD+L+ +++ + A+ +L + + LY+A+ +P Sbjct: 464 SSEQLSKQYSIFDVDYLDLLNATTTEQRLQRENLNARLELVLNRIQLYLALAGPIHP 520 >gi|167897588|ref|ZP_02484990.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 619 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|82702961|ref|YP_412527.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] gi|82411026|gb|ABB75135.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrosospira multiformis ATCC 25196] Length = 462 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 97/461 (21%), Positives = 203/461 (44%), Gaps = 27/461 (5%) Query: 7 IFSLFIVLLAGCTVGPEYTKP------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 IF++ IV ++ +G T P +P +++ K W E+F D + Sbjct: 4 IFAIIIVSISLAGIGGCKTSPLRNPGDAGAAIPARWTA--DKGTPQPTPENWVETFGDPN 61 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLK 113 L+ +V AL N + A R+ AA A +P YA I + + Sbjct: 62 LSAVVNSALADNYQLKAAAARVKAAVAQARIDGASRWPQLLFAPDYQYAQIREEGFGSAR 121 Query: 114 TNSTGQLDS-DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + L S W++D++G+ + +++ ++ A+L++ +++ SY + + Sbjct: 122 FSVFETLFSLSWELDVWGRISDFQQAAIREANATATDFQGARLSLAARVAQSYFELAEAR 181 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++A + + ++L +F +G T L + ++ + E+++ ++ Sbjct: 182 LQAAVAERSVKDRSVIVDLVRGRFARGLTKALDVRLALTDLANAEAELTQARNQVQIVAR 241 Query: 232 NISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + LLG YP ++ P L + G+P++L+ RPD+ +L + + Sbjct: 242 RLQVLLGRYPEAVL------RATAELPELPPDMPAGLPSELLERRPDLVSAYDRLLAADS 295 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRA 347 ++ + L P ++L + + + W+ L P+F G+I+ I Sbjct: 296 RLQSTRKLLLPRVALTAAGGMRSQALTELVDPRALAWNVLIGLAQPVFTGGRIRGQIELD 355 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ ++ +++T LNA +EVE AL + +K L+ AVE + S L++ +Y+ G Sbjct: 356 KAQTEQALNLYKDTALNAFREVEQALAADEWLRKEEKALRSAVEQTEASRKLAVYSYQHG 415 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L +LD R+T + +RQL + ++LY+A+G Sbjct: 416 YIEILTLLDSYRSTLTAQSAHLSVRRQLLSNRINLYLALGG 456 >gi|324008656|gb|EGB77875.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 57-2] Length = 493 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|167914248|ref|ZP_02501339.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 619 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 201/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV----IS 158 L+ + ++S ++IDLFG+ R + + Y + A+ +V ++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSLSHAA---QEQYLATEEARRSVHISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 AEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ V + + + Sbjct: 364 NAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 424 TKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|170681660|ref|YP_001746472.1| putative outer membrane efflux protein MdtP [Escherichia coli SMS-3-5] gi|170519378|gb|ACB17556.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli SMS-3-5] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|187924009|ref|YP_001895651.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187715203|gb|ACD16427.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 504 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/419 (21%), Positives = 192/419 (45%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 W + F D L L+ AL+ N ++ QA R+ AA + +A P Sbjct: 66 WADQFGDAQLKALLAEALKGNPSVEQARARVAAAAAYSDTAKASTLPKVGADYSLTRQQY 125 Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 S A + + + +T + G L + + +DL+G+ R +++SL+ L + A ++ KL++ Sbjct: 126 SGTALVPPPYGGSWQTENKGLLSASYDLDLWGKNREALKASLSQLQATQADEEVVKLSLT 185 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 S Y AR + R IA + + ++ ++ + G +++ +A + + Sbjct: 186 SATARDYNQLARLYTLR-DIAQEEITQREQIDRITAGRIATGLDTQVERKTAQANLATSR 244 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + ++ S + ++ LLG L + + + + +P N+ PADL+ RP Sbjct: 245 ATLAAIDGSIVTTRYQLAALLGAGPDRGLA-IARPTLGVGDEVRLPDNL--PADLVSRRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLP 333 D+ + ++ + AK++ YP ++L+ +I L + S GP ++LP Sbjct: 302 DLVAAKWRVDALTHDVKEAKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASVGPAIHLP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++++ ++ + T+ +T++ A+ EV L I + + Q A E Sbjct: 362 IFDGGQLRAQLKGRYADFDYAVATYNQTLVTALSEVATQLAQIRSTDEQLADAQAAQEAA 421 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + + L+++ Y+ G + L +L+ + T + D +A ++ + + L A+G GY Sbjct: 422 RGADQLALVQYKAGLTNQLTVLNAD--TTALAADQQVANLKMNRRDQQIALAAALGGGY 478 >gi|293407811|ref|ZP_06651651.1| outer membrane efflux protein MdtP [Escherichia coli B354] gi|284924174|emb|CBG37274.1| multidrug resistance outer membrane protein [Escherichia coli 042] gi|291472062|gb|EFF14544.1| outer membrane efflux protein MdtP [Escherichia coli B354] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|320200785|gb|EFW75371.1| Outer membrane component of tripartite multidrug resistance system [Escherichia coli EC4100B] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKNSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|218707702|ref|YP_002415221.1| putative outer membrane efflux protein MdtP [Escherichia coli UMN026] gi|293402718|ref|ZP_06646815.1| outer membrane efflux protein MdtP [Escherichia coli FVEC1412] gi|298378247|ref|ZP_06988131.1| outer membrane efflux protein MdtP [Escherichia coli FVEC1302] gi|300897499|ref|ZP_07115914.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 198-1] gi|218434799|emb|CAR15732.1| outer membrane factor of efflux pump [Escherichia coli UMN026] gi|291429633|gb|EFF02647.1| outer membrane efflux protein MdtP [Escherichia coli FVEC1412] gi|298280581|gb|EFI22082.1| outer membrane efflux protein MdtP [Escherichia coli FVEC1302] gi|300358720|gb|EFJ74590.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 198-1] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 202/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R A+ N V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDTGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|91213628|ref|YP_543614.1| putative outer membrane efflux protein MdtP [Escherichia coli UTI89] gi|117626367|ref|YP_859690.1| putative outer membrane efflux protein MdtP [Escherichia coli APEC O1] gi|218561170|ref|YP_002394083.1| outer membrane efflux protein MdtP [Escherichia coli S88] gi|237703667|ref|ZP_04534148.1| RND efflux system [Escherichia sp. 3_2_53FAA] gi|91075202|gb|ABE10083.1| putative enzyme [Escherichia coli UTI89] gi|115515491|gb|ABJ03566.1| putative multidrug efflux system component [Escherichia coli APEC O1] gi|218367939|emb|CAR05737.1| outer membrane factor of efflux pump [Escherichia coli S88] gi|226901579|gb|EEH87838.1| RND efflux system [Escherichia sp. 3_2_53FAA] gi|294489602|gb|ADE88358.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli IHE3034] gi|307629151|gb|ADN73455.1| putative outer membrane efflux protein MdtP [Escherichia coli UM146] gi|315287894|gb|EFU47296.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 110-3] gi|323950354|gb|EGB46235.1| NodT family protein efflux transporter [Escherichia coli H252] gi|323954434|gb|EGB50218.1| NodT family protein efflux transporter [Escherichia coli H263] Length = 488 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|237752533|ref|ZP_04583013.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376022|gb|EEO26113.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 483 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 101/413 (24%), Positives = 196/413 (47%), Gaps = 25/413 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHR---F 108 F D++LN L +AL +NL + A RI A+ + S LFP + S +H Sbjct: 70 FLDSNLNALFDLALSKNLDLQIAQARILQAQSQLKSAWGSLFPQINSTLNTSTNHTRTDT 129 Query: 109 IPNLKTNSTG-QLDS--DWKIDLFGQRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSY 164 P LKT++ Q+ + W++DLFG+ RH +++ +L + ++ AK+ + + + Y Sbjct: 130 TPTLKTHTNNTQIGATLSWELDLFGRLRHTKNAKESLYQKSIQDLENAKITLFADIATLY 189 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ + + + + Y++ +EL+ LK G L + + + ++ + TL K Sbjct: 190 FTLLETQQNLILTKENITHYQEALELTRLKVENGLLDSTELFEKQDLLTQEQNTLETL-K 248 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 S + N +L + L + Q+ P +Y + +PAD + +RPDI+ Sbjct: 249 SLEVESKNALLILLDLDSNLLPFKISQTLP-TPKIYFNL-TNLPADTLLSRPDIKASLLS 306 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSN 343 L + AK+ L+P +S++ +I D+S N W L PI ++ ++ N Sbjct: 307 LHAQIYTKANAKASLFPIISISANINEILDSSTQASGNLAWGLASSLSAPILNRTQLTQN 366 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ++ +E Y+ Q+++ NA E+ENA ++ K T+LQ++ + + + + N Sbjct: 367 YFLQDALLKESYLILQKSLKNAFFEIENASFNV---KSAHTQLQNSQKRLENAQ--NYYN 421 Query: 404 YRQGRYS--LLDILDIERATAKV---EVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + R+S L+D+ + +A + + L+ A + K+ + LY A G N Sbjct: 422 FSLNRHSIGLIDLREHSLNSASLNNAKKSLNTAHSENLKTLISLYKAFGGNLN 474 >gi|296123093|ref|YP_003630871.1| outer membrane efflux protein [Planctomyces limnophilus DSM 3776] gi|296015433|gb|ADG68672.1| outer membrane efflux protein [Planctomyces limnophilus DSM 3776] Length = 527 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/334 (21%), Positives = 163/334 (48%), Gaps = 15/334 (4%) Query: 124 WKIDLFGQRRHIE--SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 W+ID++ + R+ ++L L + Q + ++S++ Y + ++ I + + Sbjct: 199 WEIDIWRKLRNARDAATLRYLGTCDGQAYMVT-RLVSEVAEKYYELMSLDNQMQILDKTI 257 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YP 240 ++ ++++EL+ + G ++L++ + +AE++ +S+ + + + I+ LLG YP Sbjct: 258 EIQEQSLELAKARKAAGRDTELAVQRFQAEVRKNQSEKLIILQQIVEAENRINFLLGRYP 317 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 M+ S+ NL P+ G+P +++NRPD+R EK+L+ + + +A++ Y Sbjct: 318 QP----VMRSTSSFLDLNLQ-PLCAGLPGQIMQNRPDVRQAEKELSAAGLDVKVARARFY 372 Query: 301 PSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 PSL +N + N+ ++T ++ L P+ ++ I+++ A + + Sbjct: 373 PSLIVNAGVGYNAFNAKYLFSTPDSLIYNVAGDLVAPVINRSAIQADYLTANAQQLQCVY 432 Query: 357 TWQETVLNAIKEVENALTSI-NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +Q+ +LNA E+ N L+ + N I K Q L S + + ++ R +++L Sbjct: 433 NYQQVILNAYTEIVNRLSKVENYQASIEIKKQQLAALEASVDSATKL-FQNARAEYVEVL 491 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +R + + L K+Q + + Y A+G G Sbjct: 492 LAQRDMMEARMVLIETKQQQLAAAITAYQALGGG 525 >gi|110644438|ref|YP_672168.1| putative outer membrane efflux protein MdtP [Escherichia coli 536] gi|191172000|ref|ZP_03033545.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli F11] gi|300994933|ref|ZP_07180987.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 200-1] gi|110346030|gb|ABG72267.1| putative outer membrane efflux protein [Escherichia coli 536] gi|190907765|gb|EDV67359.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli F11] gi|300304905|gb|EFJ59425.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 200-1] gi|324015788|gb|EGB85007.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 60-1] Length = 488 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 95/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPFYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPQVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + VE + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAE---RVEATR 423 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 424 FTLRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|229588512|ref|YP_002870631.1| putative fusaric acid resistance protein [Pseudomonas fluorescens SBW25] gi|229360378|emb|CAY47235.1| putative fusaric acid resistance protein [Pseudomonas fluorescens SBW25] Length = 523 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/463 (19%), Positives = 200/463 (43%), Gaps = 31/463 (6%) Query: 15 LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++GC + P+ + L T +I ++ + T WW+++ D LN+ V +A Q Sbjct: 41 ISGCIGTGGIAPQGQSLNASTLATDEAIQSAAQDAHWPTAHWWQAYGDPQLNRWVDLATQ 100 Query: 71 QN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 + + + A R A I L +S ++ P + G+L Sbjct: 101 HSPSMAMAAARVREARAMAGIAESAESLQINSDTALKRHNWPKDQFYGPGELSGANTWDN 160 Query: 123 ------DWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYID-ARHFKERI 174 + +DL+G+ + +L + A+ A+L + + ++ +YI + H+ R Sbjct: 161 NASLGLSYALDLWGRESNATERAVDLAHMSVAEARQAQLELQNNVVRAYIQLSLHYANR- 219 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I L ++ ++L+H + G + + + E + + L++ ++ + ++ Sbjct: 220 DIVAATLAQQQQILDLAHKRLNAGLGTHFDVSQAETPLPETHRQLDALDEEIALSRNQLA 279 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L G +Q+ + + L +P ++ PA L+ RPD+ ++A I + Sbjct: 280 ALAGKGPGAGAQ-LQRPTLSLAAPLKLPSSL--PAQLLGQRPDVVASRWQVAAQARGIDV 336 Query: 295 AKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 + YP++ L GS+ G +++ GP + LPIFD G++++ + A + Sbjct: 337 VHAGFYPNVDLVGSLGYMATGGGMLAFLAGKKFNYNVGPAITLPIFDGGRLRAELGEASA 396 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + +T++NA+K + + L DK+ V Q +V +K+ ++MI Y++G Sbjct: 397 GYDIAVARYNQTLVNALKGISDQLIRRESMDKQSVFAAQ-SVASAQKTYDIAMIAYQRGL 455 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L++L+ + + + + ++ +L A+G G + Sbjct: 456 TDYLNVLNAQTLLFRQQQVEQQVQAARLSAHAELVTALGGGLD 498 >gi|323965745|gb|EGB61197.1| NodT family protein efflux transporter [Escherichia coli M863] gi|327250430|gb|EGE62143.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli STEC_7v] Length = 488 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/473 (18%), Positives = 205/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDFHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSTNGFLSPYAMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIKPVALPQVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L D F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAD 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + + E+ L + + + L ++G GY Sbjct: 431 AA---YQRGLTSRLQATEAQLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|218692377|ref|YP_002400589.1| putative outer membrane efflux protein MdtP [Escherichia coli ED1a] gi|218429941|emb|CAR10773.1| outer membrane factor of efflux pump [Escherichia coli ED1a] Length = 488 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDSLIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHPLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETVAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|260592048|ref|ZP_05857506.1| outer membrane efflux family protein [Prevotella veroralis F0319] gi|260535926|gb|EEX18543.1| outer membrane efflux family protein [Prevotella veroralis F0319] Length = 476 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 98/431 (22%), Positives = 184/431 (42%), Gaps = 54/431 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 W + F D +L L+ AL N + + + AK NILS R + PS A+++ Sbjct: 57 WRDFFQDETLRALIDTALNNNQDLKITLQEMAIAKSNILSKRGQMLPSITANMAVGASKV 116 Query: 106 HRF-----------------IPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLD 143 R+ IP + + L +W IDL+ Q R +E LA+ D Sbjct: 117 GRYTADGAGNVGTQITPGHNIPTVTPDIAPSLQLNWTIDLWNQLNSDKRAAVERYLASED 176 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 K +++ + +Y ++ I HQ + L ++ ++++ ++ A ++L Sbjct: 177 GQRT----LKSQLVADVAENYYLLLALDCKLDIMHQYIKLQERAVQIARVQKEADADTQL 232 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL----HYMQKQSNNFQPNL 259 ++ K EAE+ +D L ++ +N++ LLG T L + M +Q Sbjct: 233 AVDKFEAELAKASADEYQLRQAITETENNLNMLLGRYPTPILRNKANLMSRQ-------- 284 Query: 260 YIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 +P ++ IP L+ RPD+ E +L + + +A+ P SLN S AL D P Sbjct: 285 -VPSSLQTIPTSLLLKRPDVVQAEHQLEAAKWDVEVARKAFLP--SLNVSAALGIDAFNP 341 Query: 319 GY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 Y + ++ L PI +K I++N +A + E + + +L+A ++ Sbjct: 342 KYLLRIPKSIAFNVVGGLAAPIINKKAIQANFDQANALQLEALYNYDKVLLSAYSDMTTL 401 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + + + + E ++++ Y R + L++LD ER +V+L + Sbjct: 402 QSKAHNLAQYQSMKTKQAEALARAVTAVQQLYNYNRATYLEVLDSEREQLDCQVELIDTQ 461 Query: 433 RQLAKSYVDLY 443 Q + +DLY Sbjct: 462 LQQLSALIDLY 472 >gi|134278905|ref|ZP_01765618.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|134249324|gb|EBA49405.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 305] Length = 619 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|67641981|ref|ZP_00440745.1| TrpC [Burkholderia mallei GB8 horse 4] gi|121599154|ref|YP_992737.1| hypothetical protein BMASAVP1_A1405 [Burkholderia mallei SAVP1] gi|124385772|ref|YP_001026469.1| efflux system protein [Burkholderia mallei NCTC 10229] gi|167001868|ref|ZP_02267658.1| TrpC [Burkholderia mallei PRL-20] gi|121227964|gb|ABM50482.1| putative membrane protein [Burkholderia mallei SAVP1] gi|238523019|gb|EEP86460.1| TrpC [Burkholderia mallei GB8 horse 4] gi|243062370|gb|EES44556.1| TrpC [Burkholderia mallei PRL-20] Length = 514 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 56/310 (18%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---- 106 +WW +F D L++LV+ A Q NL + A RI A+ + + A P AS S+ Sbjct: 88 RWWRTFGDPVLDRLVERAAQDNLDVQAAVLRIAEARAQVRAAAAQGLPDVRASASYQREQ 147 Query: 107 ---------------------------RFIPN----LKTNSTGQLD-------------- 121 R P L+ + LD Sbjct: 148 LGLKGFLEDGGVDAQLERLGAPGSPLERIAPGAGAALRRGAEHTLDQLTSPVNLWQAGFD 207 Query: 122 SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + W++DLFG+ RR +E++ A +A + A L++ +++ +Y+ R + ++A + Sbjct: 208 ASWELDLFGRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQLRGAQALRALADEQ 267 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 D+ + L+ + +G +S+L + +A + + + +P ++ + + +S LLG Sbjct: 268 RDV----VALTRDQARKGLSSELDVQSADARLAQLRAQLPQFDQQIALLRNGLSYLLGD- 322 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 A L ++ P L + IG+P+ L R RPDIR E +L + A +G+A + Y Sbjct: 323 APGALDDALREPRAL-PELPPTVPIGLPSTLARRRPDIRRAEAQLHAATAGVGVAVAQFY 381 Query: 301 PSLSLNGSIA 310 P +SL G + Sbjct: 382 PDVSLTGQVG 391 >gi|167827507|ref|ZP_02458978.1| outer membrane efflux protein [Burkholderia pseudomallei 9] gi|226195181|ref|ZP_03790772.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|225932986|gb|EEH28982.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] Length = 619 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|83646833|ref|YP_435268.1| outer membrane protein [Hahella chejuensis KCTC 2396] gi|83634876|gb|ABC30843.1| Outer membrane protein [Hahella chejuensis KCTC 2396] Length = 468 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/442 (21%), Positives = 188/442 (42%), Gaps = 26/442 (5%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTLKWWESFNDTS 60 R I + ++ L C++ P + + + ++G L ++ L D Sbjct: 23 RCIIPVLLLSLTACSLAPAKQAGELENMEAPAAWEHALGEGVALESLTDL-----IADGQ 77 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---- 116 L L++ A+Q N + Q R+ + + + A P AS + + S Sbjct: 78 LQSLLQEAMQANPDLRQTALRLRESGLTLKAQNASQLPEVSASAKGERSGSEEAGSHNAY 137 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERI 174 T L+ W++D++G R +S A D + D+ AK ++ ++++ ++I + R+ Sbjct: 138 TAGLNLSWELDIWG-RLSDQSDAAGEDYIAVEEDLNAAKASLAAQVMQTWIALSADQSRL 196 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 I +D + +F G L + ++ + L+++F + ++ Sbjct: 197 DIQQARIDSLQLTETTILERFQSGLGDLADLDAARLSTANAKAQLEQLQQTFHDRLRTLN 256 Query: 235 TLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG P E L + P++ +P + P +I RPD++ +++ A+ Sbjct: 257 VLLGRLPQAEIL------TAEILPDVALP-HANTPLQVIGARPDLKAAYRRIRAEDARTN 309 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A +L P SL+ S++ + + + WS + P+F+ GKIK+N S A Sbjct: 310 AAYKNLLPGFSLSASLSDSGERVSDLFRQSPAWSLLGSMTAPLFNGGKIKANADTQASVA 369 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + +++ET+LNA+ EVE+ L S Q A E + S++ Y QG + Sbjct: 370 ERAWWSYRETLLNALNEVESGLESERRLSAQQVHYQSAREHAESSLNHYQELYSQGLADI 429 Query: 412 LDILDIERATAKVEVDLSIAKR 433 D+L +R+ + L +R Sbjct: 430 TDLLQAQRSLFDAQTQLLETRR 451 >gi|107104258|ref|ZP_01368176.1| hypothetical protein PaerPA_01005332 [Pseudomonas aeruginosa PACS2] Length = 480 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 113/472 (23%), Positives = 206/472 (43%), Gaps = 54/472 (11%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKW-----WESFNDTSLNKLVKIALQ 70 GC V E +P+ L P G S + + + W W D L++L+ ALQ Sbjct: 12 GC-VTSEGLEPNARLQPAGALQAGRSLDGVALSPAAWPRQDWWTGLGDRQLDQLIGEALQ 70 Query: 71 Q--NLTILQATERINA---------------AKENILSVRADLFPSSYAS--ISHRFIPN 111 +L I +A R A AK + +RA P+S A + R+ Sbjct: 71 GTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGIRA---PTSVAPAPLGGRY-SA 126 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +K S G ++ DL+G +R E++L ++A A++ + + + +Y D H Sbjct: 127 IKYLSLG---FNYDFDLWGGERAAWEAALGQANAARIDSQAARIGLSASIARAYSDLAHA 183 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +A + L ++ ELS + + G SK+ L + + ++ + + E+ Sbjct: 184 FTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQLATARQQLSAAEQDIASAR 243 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ LLG L + Q N +L +P +PA+L+ R DI ++ + Sbjct: 244 IALAVLLGKGPDRGLELQRPQPLN-PASLSLPSM--LPAELLGRRADIVAARWRVEAARR 300 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 I AK++ YP+L+L G AL + + + P + LPIFD G+ ++N+ Sbjct: 301 NIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAPAISLPIFDGGRRRANLAER 360 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + +T++ A+ EV + L + + V + A ++ + + L+M Y +G Sbjct: 361 DADYDLAVGQYNKTLVQALGEVSDDLGKLRSLAQQVVDQRQARDIARSNFDLAMRRYGEG 420 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI----AIGSGYNP 452 S LD L +++ L +A+RQLA +DL + A+G G+ P Sbjct: 421 VGSYLDALSVQQ-------QLLVAERQLASLESQQIDLSVQLVQALGGGFQP 465 >gi|254189772|ref|ZP_04896281.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|157937449|gb|EDO93119.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] Length = 619 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 201/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV----IS 158 L+ + ++S ++IDLFG+ R + + Y + A+ +V ++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSLSHAA---QEQYLATEEARRSVHISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 AEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ V + + + Sbjct: 364 NAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 424 TKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|121605489|ref|YP_982818.1| RND efflux system outer membrane lipoprotein [Polaromonas naphthalenivorans CJ2] gi|120594458|gb|ABM37897.1| RND efflux system, outer membrane lipoprotein, NodT family [Polaromonas naphthalenivorans CJ2] Length = 477 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 107/469 (22%), Positives = 208/469 (44%), Gaps = 37/469 (7%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKL 64 F+L + LLAGC VGP+Y +P + D L+ WW F D L+ L Sbjct: 18 FTLAL-LLAGCAVGPDYQRPATLEVSAFKEAEGWVAAAPADALERGPWWLLFGDPVLDGL 76 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS----------SYASISHRFIPNLKT 114 N + A A+ + RA LFP+ +S S +T Sbjct: 77 AARVEVSNQNVAAAVAAYAQARAVMREQRASLFPTVTLDGGANRSHSSSSSSSASSGGRT 136 Query: 115 NSTGQL--DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 ++ QL + W+ D++G+ R +ESS A+ ++ A + A+L+ +L +Y+ R Sbjct: 137 GNSYQLSIGASWEPDVWGRLGRAVESSSASAQASAADLASARLSAQGELAINYLTLRQTD 196 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + ++ L Y++ +E++ +++ G +K +++ + ++ + ++D L + H Sbjct: 197 AQKALLETTLAGYQRTLEITQNRYSAGIAAKTDVLQAQTQLANAQADDAGLFRQRAQLEH 256 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNRPDIRYQEKKLAD 287 I+ L+G F + P + + +G+P+ L++ RPDI E+ +A Sbjct: 257 AIAVLVGEAPGNF---------SLPPAAWKPVVPEVPVGVPSTLLQRRPDIASAERGVAV 307 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + +IGIA++ YPSL L S F ++ WS G +F+ G ++ + Sbjct: 308 ANEQIGIARAAYYPSLPLGASYGFGASRVAELFSASSSVWSLGLSAAQTLFNAGATRARV 367 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 +E++ + +++TVL A + VE+ L + + A E + + Y Sbjct: 368 EGSEAAHAQAVARYRQTVLTAFQGVEDQLAATRVLLAQQDLRRQASEAADQVEQQVLNRY 427 Query: 405 RQGRYSLLDILDIERAT--AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G+ S +++ + A+ + ++A RQ + V L ++G G+ Sbjct: 428 RSGQVSYTEVITAQATALNARRALVQAMADRQ--TTAVALIQSLGGGWQ 474 >gi|78188838|ref|YP_379176.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium chlorochromatii CaD3] gi|78171037|gb|ABB28133.1| RND efflux system, outer membrane lipoprotein, NodT [Chlorobium chlorochromatii CaD3] Length = 511 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 99/471 (21%), Positives = 207/471 (43%), Gaps = 44/471 (9%) Query: 13 VLLAGCTVGPEYTKPHMPL---------LPTQFSIGNSKNLINIDTL--KWWESFNDTSL 61 ++LAGC+ P + L P + + ++++ +WWE+F L Sbjct: 42 IVLAGCSSSHTLQSPTIALNDRYQQNSAHPQLTEAEGQQQQLVVESVAARWWEAFGSPKL 101 Query: 62 NKLVKIALQQN-------LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 N+L++ +L+QN T+ QA NA + L R D S+ R N Sbjct: 102 NRLIEQSLKQNPTLAAAEATLRQAEALANAKYNSTLYPRLDAVGSA-----QRLQLNNSR 156 Query: 115 NST-----------GQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 N G L S + DL G R +++ A + + Q+ A+L + +++ Sbjct: 157 NGVEGGEKRFNLYNGSLSSSYNFDLSGANNRQLDALQAKANYQHYQLAGARLRLATEVAV 216 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + I ++ +++ L + + ++ + GA + L+++E + + +P + Sbjct: 217 TAIRQAQLGAQMEALERLIALGNEQLTINRERLRLGAIASHELLEVERMVAEQRAALPAM 276 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 +++ + H ++ L G P L FQ L +++ IP+ +R RPDI+ Sbjct: 277 RHAYQQSRHALALLEGSTPDNATLPTFTL--AEFQ--LPATLSMRIPSQFVRYRPDIQAA 332 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 E + + A+ G A + YP L+L+ GS ALT F WS +L P+F+ Sbjct: 333 EALMMAANAEYGAAAAKAYPQLTLSASLGSQALTTAALFGSGTAVWSVAGQLVQPLFNP- 391 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + A ++ + +++++L +++V + L+++ + + L + ++ Sbjct: 392 SLGDEKKAANAAFEAATAHYRQSILAGLRDVADLLSALYNNAIALAALASGAAFADEQVA 451 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L+ Y+ G S L+++ + +++++L A+ Q + LY A+G G Sbjct: 452 LTEQRYKLGAASYLEVVQAQSEATQLQLELLAARAQRLSNSAVLYQAMGGG 502 >gi|294012848|ref|YP_003546308.1| RND-family efflux transporter [Sphingobium japonicum UT26S] gi|292676178|dbj|BAI97696.1| RND-family efflux transporter [Sphingobium japonicum UT26S] Length = 513 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/408 (21%), Positives = 175/408 (42%), Gaps = 50/408 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------S 99 WW+++ D L+ L++ L+ + + A R A A L P S Sbjct: 65 WWKAYGDPQLDALIEEGLKGSPDVAAAAARFAEANAAAQQAGAPLLPAIDLDANSGVTKS 124 Query: 100 SY-ASISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKL 154 SY + F+P L T L+ + +DL+G+ R ++ + + A++D A+L Sbjct: 125 SYNMGMPKEFVPKGWLGTGRV-ALNFGFDLDLWGRNRAALAAATSE-ARAAEIDARQARL 182 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y D + I + L++ + +L + G ++ S + +A + S Sbjct: 183 ALATGVADAYADLARLHDERDIQARALEIRTASRKLVADRRANGLETRGSERQADATVSS 242 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD---- 270 ++ + +++ + H I+ L+G L + P L P +G+PAD Sbjct: 243 AKAQLAAADQAIAVRRHQIAALIGAGPDRGLAIAR-------PRLGRPGPLGLPADVTTD 295 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPGYNT 322 L+ RPDI + + +I +A++D +P++ LN I + + F G + Sbjct: 296 LVARRPDIAAALARTEAAAKRIKVARADFFPAIRLNALIGVQSLGYQTVLQNGGFAGGPS 355 Query: 323 HWS------------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 ++ GP + LPIF G + R A + + + +TVL A ++V Sbjct: 356 PFTDTLFKKDSLFGNAGPAISLPIFHGGALSGQYRGARAVYDQAVANYDKTVLGAYQQVA 415 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +A+T + + + A+ +++ ++ Y G + LD+L++E Sbjct: 416 DAVTGRQALDRRLADARAALTASEEAYGIARQRYEGGLNTYLDVLNVE 463 >gi|218260890|ref|ZP_03475964.1| hypothetical protein PRABACTJOHN_01628 [Parabacteroides johnsonii DSM 18315] gi|218224312|gb|EEC96962.1| hypothetical protein PRABACTJOHN_01628 [Parabacteroides johnsonii DSM 18315] Length = 481 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 101/448 (22%), Positives = 192/448 (42%), Gaps = 47/448 (10%) Query: 39 GNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP 98 G++ + + L+W F D+ L V++AL+ N + Q+ ER+ ++ N+ + L P Sbjct: 43 GHTYDTAFVKPLEWNVFFQDSILQGYVEVALKNNHSFKQSMERVTMSRANLQRAKGLLLP 102 Query: 99 SSYASIS---HRF-------IPNLKTNSTGQ----------------LDSDWKIDLFGQ- 131 I +RF + N +TN L+ W+ D++G+ Sbjct: 103 EVGLGIGASVNRFGEYTMDGVGNSETNVPSLSKDKHIPDPYRDFGLFLNFQWEADIWGKL 162 Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 R +++ A ++ A+ +IS+L Y + +R + + K++ EL+ Sbjct: 163 TRKKQAAAARWMASVEATRFAQSVLISELAVHYYELIGLDKRRDVLEEAHISSKRSYELT 222 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 +GA ++L++ + A + IES + ++ I+ LLG F +++ Sbjct: 223 RQLKKEGAETQLAVDQFHARMLLIESKLLENDQLIGEKERAIACLLGV----FPFEIRRM 278 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 S + P++ G+PA+++ RPD+R E +L S A + AK+ YPSL L Sbjct: 279 SFEELRQIPFPLSDGVPANMLTLRPDVRAAEMELLASKADVMAAKAAFYPSLVLGAGGGF 338 Query: 312 THDNSFPGYNTHWSFGPK---------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 NSF W P + PIF + +I+S A +S + + ET Sbjct: 339 ---NSFD--VGKWFTAPASLVYDLAAGITAPIFQRNQIRSMWEEARASQRIALSQYHETA 393 Query: 363 LNAIKEVENA-LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 L A EV + +N+ +++ K V H++S++ + ++ L++L Sbjct: 394 LKAYTEVLDLYCAGLNQVERVRLKEVETVA-HQRSVTNANELFKLNYVGFLEVLSANERY 452 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E++ L + + LY A+G G Sbjct: 453 LDSELERIDIITDLCRKKILLYRALGGG 480 >gi|126444944|ref|YP_001062080.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|126224435|gb|ABN87940.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 668] Length = 619 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 201/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV----IS 158 L+ + ++S ++IDLFG+ R + + Y + A+ +V ++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSLSHAA---QEQYLATEEARRSVHISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 AEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ V + + + Sbjct: 364 NAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 424 TKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|15600351|ref|NP_253845.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1] gi|9951459|gb|AAG08543.1|AE004928_9 probable outer membrane protein precursor [Pseudomonas aeruginosa PAO1] Length = 492 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 113/472 (23%), Positives = 207/472 (43%), Gaps = 54/472 (11%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKW-----WESFNDTSLNKLVKIALQ 70 GC V E +P+ L P G S + + + W W D L++L+ ALQ Sbjct: 24 GC-VTSEGLEPNARLQPAGALQAGRSLDGVALSPAAWPRQDWWTGLGDRQLDQLIGEALQ 82 Query: 71 Q--NLTILQATERINA---------------AKENILSVRADLFPSSYAS--ISHRFIPN 111 +L I +A R A AK + +RA P+S A + R+ Sbjct: 83 GTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGIRA---PTSVAPAPLGGRY-SA 138 Query: 112 LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +K S G ++ DL+G +R E++L ++A A++ + + + +Y D H Sbjct: 139 IKYLSLG---FNYDFDLWGGERAAWEAALGQANAARIDSQAARIGLSASIARAYSDLAHA 195 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +A + L ++ ELS + + G SK+ L + + ++ + + E+ Sbjct: 196 FTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQLATARQQLSAAEQDIASAR 255 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 ++ LLG L + Q N +L +P +PA+L+ R DI ++ + Sbjct: 256 IALAVLLGKGPDRGLELQRPQPLN-PASLSLPSV--LPAELLGRRADIVAARWRVEAARR 312 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 I AK++ YP+L+L G AL + + + P + LPIFD G+ ++N+ Sbjct: 313 NIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAPAISLPIFDGGRRRANLAER 372 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + +T++ A+ EV + L + ++ V + A ++ + + L+M Y +G Sbjct: 373 DADYDLAVGQYNKTLVQALGEVSDDLGKLRSLEQQVIDQRQARDIARSNFDLAMRRYGEG 432 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI----AIGSGYNP 452 S LD L +++ L +A+RQLA +DL + A+G G+ P Sbjct: 433 VGSYLDALSVQQ-------QLLVAERQLASLESQQIDLSVQLVQALGGGFQP 477 >gi|254192791|ref|ZP_04899226.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei S13] gi|169649545|gb|EDS82238.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei S13] Length = 619 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 203/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATRDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKTNSTGQLDS-----------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVIS 158 L+ + GQ + ++IDLFG+ R + + L + A+ + +++++ Sbjct: 131 LR--APGQSTAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 AEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ V + + + Sbjct: 364 NAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 424 TKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|238027579|ref|YP_002911810.1| hypothetical protein bglu_1g19970 [Burkholderia glumae BGR1] gi|237876773|gb|ACR29106.1| Hypothetical protein bglu_1g19970 [Burkholderia glumae BGR1] Length = 509 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/423 (20%), Positives = 176/423 (41%), Gaps = 26/423 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR- 107 L W F D L +L+ AL N +I QA R+ A I + RA L P S Sbjct: 70 ALDWASQFGDPQLPRLIDEALAGNPSIAQAQARLAKASSYIEASRATLLPKVEGRYSWSR 129 Query: 108 --------FIPNLKTNSTGQ----LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 + P N + + W++DL+G+ R + S ++ +A A+ + A++ Sbjct: 130 ELYSGNGLYPPPYGGNWYSENNVLASASWELDLWGKNREKLRSVVSQRKAAQAEFEQARV 189 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y IA + + + +++ + G + + + + Sbjct: 190 TLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVAT 249 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ES + L+ + ++ LLG L + P I + IPADL+ Sbjct: 250 SESTLSDLDGRITTVRYQLAALLGKGPDRGLAI---DTPVLNPGGAITLPDTIPADLVSR 306 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R D+ ++ ++ + K++ +P ++L G A N + FGP ++ Sbjct: 307 RADLVAARWQVEAAMHDVKETKAEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAIH 366 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIF G +++ ++ A + + +T++ A+ +V + SI + + Q A++ Sbjct: 367 LPIFHGGALRAQLKGAYADYDLSVANYNQTLIGALNDVATQVASIRALDRQMGDAQRALD 426 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGS 448 ++ L+++ Y+ G L +L + + E +L + +R L + L A+G Sbjct: 427 ASTRAYELAVVRYKAGLSPQLQVLSADNSRLDAEQSVTNLVMRRRDL---QIGLIKALGG 483 Query: 449 GYN 451 G++ Sbjct: 484 GFD 486 >gi|172064859|ref|YP_001815571.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171997101|gb|ACB68018.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 702 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 167/356 (46%), Gaps = 27/356 (7%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASIS 105 T W + F D L L+ AL+ + T+ QA R+ AA+ S RA P +SYA Sbjct: 260 TADWADQFGDGQLKSLIDEALKGSPTLAQARARVAAAQAYSESARAGTMPRIDASYALTR 319 Query: 106 HRF-----IP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKL 154 +F +P + +T + G L + +++DL+G++R +++S++ L ++ A + +L Sbjct: 320 QQFSGTALVPPPYGGSWQTENRGILGASYELDLWGKKREALKASVSTLQASRADAETVRL 379 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + +Y + IA Q +D +K ++ + G +++ A + + Sbjct: 380 TLTTSIARTYNELARLHLLHDIAQQEIDRREKIDRIAAGRIATGLDTQVERETARANLAT 439 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + +L+ + I+ LLG L + + + +P N+ PADL+ Sbjct: 440 SRASLKSLDGRILATRYQIAALLGAGPDRGLR-IARPMLGIGNEVRLPDNL--PADLVSR 496 Query: 275 RPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGP 328 RPDI R++ LA V + AK++ YP ++L+ +I L + S GP Sbjct: 497 RPDIVAARWRVDALAHDVKE---AKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASIGP 553 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIV 383 ++LPIFD G +++ ++ + + + ++ A+ EV + + + D ++V Sbjct: 554 AIHLPIFDAGALRAQLKGRYADFDNAVAAYNQALVTALSEVATQIADVRSTDAQLV 609 >gi|76818858|ref|YP_337460.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254265459|ref|ZP_04956324.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|76583331|gb|ABA52805.1| outer membrane efflux protein [Burkholderia pseudomallei 1710b] gi|254216461|gb|EET05846.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 619 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|182679832|ref|YP_001833978.1| RND efflux system outer membrane lipoprotein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635715|gb|ACB96489.1| RND efflux system, outer membrane lipoprotein, NodT family [Beijerinckia indica subsp. indica ATCC 9039] Length = 531 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 97/472 (20%), Positives = 206/472 (43%), Gaps = 35/472 (7%) Query: 6 AIFSLF--IVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 ++F+L ++L+GC P P + + +P + N+ +WW F + LN Sbjct: 27 SLFALIQSAIILSGCV--PSSEMPDLMMGIPATYRQDGPGERKNLPPDEWWRDFRSSELN 84 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFP----------SSYASISHRFIPNL 112 + N + A RI A L P S +A++++ + ++ Sbjct: 85 GFMSEVPTGNFDVAAAIARIVQADAAAHIAGTALLPTMTANDTVTRSKFANLNNTNVNSV 144 Query: 113 KTNSTG--------QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPS 163 +N++ L + + +DL+G R ++++ + + D+ L + Sbjct: 145 TSNASNTARTVIVTNLQASYILDLWGMNRAKLQAAEETSNYNRWERDVVALTAYGTTGTT 204 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ ++RI+ + L + ++L + G + L+L + EA + +I + IP L+ Sbjct: 205 YLAVLGARDRINNQNDNLKAASRILKLIQDRVKFGTANALNLAQQEALVANIRAAIPPLQ 264 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + N+ + L+G + + N+ I G+P++++ RPD++ E Sbjct: 265 LTGDQNLVALGLLVG----RVPESIVIKGNSLHDVTMPKIAPGLPSEVLTQRPDVQAAEA 320 Query: 284 KLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 +LA + A + A++ +P + L G S+AL F +S L PIFD G Sbjct: 321 QLASAHASVVAARAAFFPQIQLTGEGGFQSLAL--KTLFQPSAGLYSLAAGLTQPIFDAG 378 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++ + +A++ +E +++++++A +VE AL SI ++ L ++ ++++ Sbjct: 379 LLQGDYDQAKARQEELLADYRKSIVSAFTDVEKALISIRNLRRQEVLLGESLAASQRALD 438 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ R G +L ++ LS + L ++ V LY A+G G+ Sbjct: 439 LAEDQLRAGTVDYTTVLQAQQTLFTTRDTLSQTRLALLQAGVALYQALGGGW 490 >gi|256819136|ref|YP_003140415.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga ochracea DSM 7271] gi|256580719|gb|ACU91854.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga ochracea DSM 7271] Length = 465 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 109/489 (22%), Positives = 210/489 (42%), Gaps = 78/489 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 AI ++ + L A C Y +P L T+ ++++ TL W F D L Sbjct: 10 AIVTVALTLTA-CAGRKAYERPQAIDEKLFRTESPATDAQS---DATLSWRNIFTDPLLQ 65 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-----TNST 117 + + AL NL + A +N++S +A L S A FIP L T ST Sbjct: 66 QHISKALSNNLDV-------RVAMQNVVSAQAYLKQSKAA-----FIPTLSIGANYTRST 113 Query: 118 GQLDS-------------------DWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAK 153 L++ W+ D++G+ R S LA L++ A + Sbjct: 114 SSLNAGGGAPDRTYNNLFDITGSASWEADIWGKLSAQKRASYASYLATLEAQKA----VQ 169 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 V++ L +Y E+ + Q ++ K++E + G+ ++++ ++EA + Sbjct: 170 SEVVATLATAYYQLLMLDEQKKVLEQTIEFRTKSLETTKQLKKAGSITEVATKQIEALVY 229 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + ++ + T+ S + I LLG E H +++ S + + G L+ Sbjct: 230 NAQAQLITINNSVWALENTICVLLG----EEPHTIER-STLAEQQFPTRFHQGYAVSLLE 284 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGPKL 330 NRPD+ E L ++ +A+S+ YP+L+L+ G I+ T D F + +F L Sbjct: 285 NRPDVARAELNLRNAFELTNVARSNFYPTLTLSARGGISSTELDTWFSAKSMFANFIAGL 344 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT------ 384 PI ++ +I++ +++ + + +++ +L+A KEV +A+ + + + Sbjct: 345 AQPILNRRQIRTQYEVQKAAQETALLNFKKAILSAGKEVSDAMRQFSSQDEFIQLKTQEM 404 Query: 385 -KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY--VD 441 Q A + K+ M+NY L+++ E ++ +LS+A Q + + Sbjct: 405 KAYQEATDYSKQLFDSGMVNY-------LEVITAE--VNRLNAELSVANAQFTRMQYGIT 455 Query: 442 LYIAIGSGY 450 LY A+G G+ Sbjct: 456 LYKALGGGW 464 >gi|288803841|ref|ZP_06409267.1| outer membrane efflux family protein [Prevotella melaninogenica D18] gi|288333675|gb|EFC72124.1| outer membrane efflux family protein [Prevotella melaninogenica D18] Length = 477 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 99/431 (22%), Positives = 188/431 (43%), Gaps = 50/431 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 W E F D L L++ ALQ N + + + A+ I + +A L PS A+I Sbjct: 58 WREFFQDPMLQTLIETALQNNQDLKITLQELAIARSAINAKQAALLPSVTANIGAGVSKV 117 Query: 106 ------------------HRFIPNLKTNSTGQLDSDWKIDLF-----GQRRHIESSLANL 142 H+ IP + + + L DW IDL+ G++ +E LA Sbjct: 118 GRYTAEGAGNVGTEMTPGHK-IPTVIPDLSPSLQVDWTIDLWNKLNSGKKAAVERYLA-- 174 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 S Q I K +++ + +Y ++S+ Q + L K + ++ ++ A ++ Sbjct: 175 -SEAGQRAI-KSQLVADVAENYYLLLALDYKLSVMQQYISLQKDAVRIAQIQKEADADTQ 232 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L++ K EAE+ ++D L +S +N++ LLG F +Q+ +F L +P Sbjct: 233 LAVEKFEAELAKAQADEYLLRQSIVETENNLNLLLG----RFPQTIQRTKVDF---LQLP 285 Query: 263 INI---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---- 315 + + L+ RPD+ E +L + + A+ + PS +++ +I L N Sbjct: 286 MPTTAHSLSTQLLLQRPDVIQAEHQLKAAKWDVETARKEFLPSFNISAAIGLNAFNPKYL 345 Query: 316 -SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 P + G L P+ +K I++N +A++ E + +T+L A E + Sbjct: 346 FKLPESLAFNALG-GLTAPLINKKAIQANFAQADALQIEALYNYDKTLLTAFIETSTLQS 404 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 I+ K + Q + +++S + Y R + L+++D ER +++L AK Q Sbjct: 405 KISNIKLLQQFKQKQNDALVRAVSAAQKLYLNNRATYLEVIDSERGQLDCKMELIDAKSQ 464 Query: 435 LAKSYVDLYIA 445 + +++Y A Sbjct: 465 QLSTLIEMYSA 475 >gi|53721760|ref|YP_110745.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|217418738|ref|ZP_03450245.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|52212174|emb|CAH38193.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|217398042|gb|EEC38057.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 619 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|329119385|ref|ZP_08248071.1| NodT family efflux transporter [Neisseria bacilliformis ATCC BAA-1200] gi|327464530|gb|EGF10829.1| NodT family efflux transporter [Neisseria bacilliformis ATCC BAA-1200] Length = 460 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 96/436 (22%), Positives = 196/436 (44%), Gaps = 38/436 (8%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQ--FSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 + +L+GC V T+ + L T S + +++ WWE + LN L + Sbjct: 14 ILAAVLSGCAV--HSTEQALTLESTGKVMSAAEAAERYDVNG-NWWEIYQSPQLNALTEQ 70 Query: 68 ALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFIPNLKTNSTG-----QL 120 AL N+ + QA +N A + NIL ADL P +++ NLKT G QL Sbjct: 71 ALANNIDLKQAAISVNKALYQANILG--ADLVPKFSGALNASTSKNLKTGDRGSTYGSQL 128 Query: 121 DSDWKIDLFGQRRHIESSLANL-DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIA 177 +++DL+ R+ ++ A + + Q D+A +L +++ + +Y + + E +++A Sbjct: 129 GLSYELDLW--RKLSATADAQVWEYQATQQDMANTRLTLVNNVADAYFNIAYLNEAMTLA 186 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + + Y++ ++ KF G + + S ++ + +L+ S + + LL Sbjct: 187 EKSVRQYQEIARIADAKFRLGRADSSEPTQARQSLLSAQNSLISLKNSREAQIQTLRNLL 246 Query: 238 GYPATEFLHYMQKQSNNFQPNLY-IP----INIGIPADLIRNRPDIRYQEKKLADSVAKI 292 E + P Y +P +++ +P ++ NRPD+R E ++ S+ + Sbjct: 247 NLKPNETIA--------ADPAAYRLPGVKGVDLNVPITVLANRPDLRAAEYRVQSSLQSL 298 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSA 351 K YPS++L +++ + + + +N G + LP + +K N + A+++ Sbjct: 299 TAQKRSWYPSITLGATLSTSSNQAKSAFNVPMLGGTVAVNLPFLNWNTLKWNDKTAQANF 358 Query: 352 QEQYITWQETVLNAIKEVE-NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +++++ + A+ EV N L N ++ + Q L +K+ + Y+ G+ Sbjct: 359 DNARLSFEKALTTALNEVNTNYLAYQNAQAQLANQEQR-YTLDRKNSRYYQVRYQHGKNE 417 Query: 411 LLD---ILDIERATAK 423 L D L+ E TA+ Sbjct: 418 LKDWISALNSEYGTAQ 433 >gi|167567873|ref|ZP_02360789.1| probable outer membrane chanel lipoprotein [Burkholderia oklahomensis EO147] Length = 203 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 8/190 (4%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--HW 324 +PA I RPD+R E+ LA + A+IG A S PSLSL GSI + T W Sbjct: 2 LPARAIEQRPDVRSSERALAAASAEIGEAISARLPSLSLGGSIEIDRYRVTGQALTLRPW 61 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SFGP L +P+FD G + + A E ++ V A+ EVENAL I+ + Sbjct: 62 SFGPSLSVPLFDGGSGAARVEGARGRYDEALANYKRKVRQAVMEVENALARIDAS---LG 118 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK-VEVDLSIAKRQL--AKSYVD 441 + + A+ + + R+ R D+L++E A + V S+A +L A++++ Sbjct: 119 RQRAALVAQENYGRYAQTVERRFRAGASDVLEVETARRQYVTSRQSVASARLERAQAWIA 178 Query: 442 LYIAIGSGYN 451 LY A+G G+ Sbjct: 179 LYRAVGGGWR 188 >gi|221236234|ref|YP_002518671.1| outer membrane protein oprM [Caulobacter crescentus NA1000] gi|220965407|gb|ACL96763.1| outer membrane protein oprM [Caulobacter crescentus NA1000] Length = 576 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 108/475 (22%), Positives = 194/475 (40%), Gaps = 55/475 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN-- 72 LA CT + LP+ + L +WW FND +LN LV AL Q+ Sbjct: 110 LAACTTPARKAEVQ---LPSAYEAPAGPALAPQALDQWWTQFNDPALNALVTTALAQSPD 166 Query: 73 -----------LTILQATERINAAKENIL---SVRADLFPSSYASISHRFIPNLKTNSTG 118 I Q R + L + R D + + + + + Sbjct: 167 ARLAAARLEEARAIRQGQIRQIFIPQTPLVGSAQRTDTDINEQSGVGAFTQGGVSKTYSA 226 Query: 119 QLDSDWKIDLFGQR----RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF---- 170 D W++DL G+R R +++ +A AY A +++ SY +AR Sbjct: 227 NFDVSWELDLIGRRLAALRVVKNDMAAARFAYEGARAALAANVAQ---SYFEARGLAVQL 283 Query: 171 ---KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +E + IA + D+ + + ++G + L + EA+ ++E+++ ++ Sbjct: 284 DDARESVRIARSLADVAAERGRRGLIATSEGERAAADLAQAEAQAAALEAELRAARRTLL 343 Query: 228 MNV-HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + V + L P T L +P P+ P L+ RPD+R +LA Sbjct: 344 ILVGKGVDPLETLPVTASLA---------KPP---PVPAATPGQLLARRPDVREAAARLA 391 Query: 287 DSVAKIGIAKSDLYPSLSL--NGSIALTHDNSF--PGYNTH-----WSFGPKLYLPIFDK 337 + + I++ L+P+L+L G I+ SF G T W+ G L +P+ + Sbjct: 392 SASGNLNISELALFPTLTLTPGGGISKAITPSFLDAGAQTSTTSSAWTIGANLSIPVLNI 451 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 K+ ++I+ + + ++ IT+++TV A E +NAL + D++ V L + Sbjct: 452 PKLMTDIKASNARVEQAAITYEKTVQTAFGEADNALVQLAADERRVALLTAGERRAAVAY 511 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S ++ G L L E+A V + A+ Q + V Y A+G G++P Sbjct: 512 EASRKSFAAGLTDLTTALQAEQAWRAVRSASTAAQTQALQRAVQTYKALGGGWSP 566 >gi|48842911|emb|CAF31357.1| putative outer membrane protein [Burkholderia cepacia] Length = 536 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/417 (20%), Positives = 170/417 (40%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW + ND L+ L+ AL N + A R A+ ++ RA P ++ + R Sbjct: 107 WWRALNDAQLSALIDEALAGNPDLATADARAREAQALVIEARAARLPHLDGRASAKAERL 166 Query: 109 IPNLKTNSTG----------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 ++ G L W +DL+G RR E++L +A A++ + Sbjct: 167 SGTQFSSGEGGGFFSHTREVNLGLSWDLDLWGGRRAAWEAALGEARAAQIDAQAARVLLS 226 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y++ + ++ +A + + L+ + T+G + + E+E+ + Sbjct: 227 VNVARAYVNLAYAFDQQDVARAEYARADEALTLTRQRVTKGIDNVAQQRQAESEVAAATR 286 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ ++ LLG L ++ P + + +PA L+ R D Sbjct: 287 EQARTAQAIDSARIALAILLGAGPDRGLALVRPAP---LPTAALAVPADLPAALLGRRAD 343 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 + ++ + + A++D P++SL I L F + ++ P + LPI Sbjct: 344 LVAARWRVEAASHNVAAARADFLPNVSLTALIGLATRGGASLFQAASRTYNASPAVSLPI 403 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + +RR ++ + +T++ AI EV + L ++ Q A + Sbjct: 404 FDGGERRGVLRRRDAQYDLAVAGYNKTLIGAIGEVADDLHRLDSLAVQTDAQQRAFDSAT 463 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR G S LD L + + +++ + Q A + L A+G G+ Sbjct: 464 DAWRLADARYRAGVGSYLDALVVRQQLLVASREVAALRAQRADQSLQLVAALGGGFR 520 >gi|94498313|ref|ZP_01304872.1| putative outer membrane efflux protein OprN precursor [Sphingomonas sp. SKA58] gi|94422193|gb|EAT07235.1| putative outer membrane efflux protein OprN precursor [Sphingomonas sp. SKA58] Length = 333 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/302 (21%), Positives = 138/302 (45%), Gaps = 5/302 (1%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 K+ + +++ +Y + R ++R + + LD+ ++ + L+ +F QG ++ + + Sbjct: 22 KVQLSAEVAQTYTNLRDRQQRAAAFREGLDIQRQQLALARQRFGQGTIPAFTVGQANRAV 81 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ SD+ + + ++ ++ L G + + + P + +IG P+ L+ Sbjct: 82 QATISDLAAADAEIVIYMNALAVLAGEAPGSLDPLLTPRRDIPMPPARV--SIGDPSALL 139 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTHWSFG-PK 329 R RPDIR E+ LA + ++IG+A++ +P +S G I T + P+ Sbjct: 140 RRRPDIRAAERSLAATTSRIGVAEAARFPKISFMGILGIGGTSIGDLVDLGNISNIAVPQ 199 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L + D G+ + I +A S E +++ VL A+++ E +L + ++ V Sbjct: 200 LQWGLLDFGRTSAAISQARSGRDEAEAQYRQVVLGALEDAETSLARFAQQRRNVAAFAEI 259 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ +L Y + S D L+ +R E +L A L SYV + ++G G Sbjct: 260 KRSADEAATLMRQRYARQVISRGDALEADRQQRLAEANLHSAVAALTASYVAIQKSLGLG 319 Query: 450 YN 451 + Sbjct: 320 WT 321 >gi|16127425|ref|NP_421989.1| efflux system protein [Caulobacter crescentus CB15] gi|13424871|gb|AAK25157.1| efflux system protein [Caulobacter crescentus CB15] Length = 500 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 108/475 (22%), Positives = 194/475 (40%), Gaps = 55/475 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN-- 72 LA CT + LP+ + L +WW FND +LN LV AL Q+ Sbjct: 34 LAACTTPARKAEVQ---LPSAYEAPAGPALAPQALDQWWTQFNDPALNALVTTALAQSPD 90 Query: 73 -----------LTILQATERINAAKENIL---SVRADLFPSSYASISHRFIPNLKTNSTG 118 I Q R + L + R D + + + + + Sbjct: 91 ARLAAARLEEARAIRQGQIRQIFIPQTPLVGSAQRTDTDINEQSGVGAFTQGGVSKTYSA 150 Query: 119 QLDSDWKIDLFGQR----RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF---- 170 D W++DL G+R R +++ +A AY A +++ SY +AR Sbjct: 151 NFDVSWELDLIGRRLAALRVVKNDMAAARFAYEGARAALAANVAQ---SYFEARGLAVQL 207 Query: 171 ---KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 +E + IA + D+ + + ++G + L + EA+ ++E+++ ++ Sbjct: 208 DDARESVRIARSLADVAAERGRRGLIATSEGERAAADLAQAEAQAAALEAELRAARRTLL 267 Query: 228 MNV-HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + V + L P T L +P P+ P L+ RPD+R +LA Sbjct: 268 ILVGKGVDPLETLPVTASLA---------KPP---PVPAATPGQLLARRPDVREAAARLA 315 Query: 287 DSVAKIGIAKSDLYPSLSL--NGSIALTHDNSF--PGYNTH-----WSFGPKLYLPIFDK 337 + + I++ L+P+L+L G I+ SF G T W+ G L +P+ + Sbjct: 316 SASGNLNISELALFPTLTLTPGGGISKAITPSFLDAGAQTSTTSSAWTIGANLSIPVLNI 375 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 K+ ++I+ + + ++ IT+++TV A E +NAL + D++ V L + Sbjct: 376 PKLMTDIKASNARVEQAAITYEKTVQTAFGEADNALVQLAADERRVALLTAGERRAAVAY 435 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S ++ G L L E+A V + A+ Q + V Y A+G G++P Sbjct: 436 EASRKSFAAGLTDLTTALQAEQAWRAVRSASTAAQTQALQRAVQTYKALGGGWSP 490 >gi|255604371|ref|XP_002538211.1| Toluene efflux pump outer membrane protein ttgF precursor, putative [Ricinus communis] gi|223513263|gb|EEF24172.1| Toluene efflux pump outer membrane protein ttgF precursor, putative [Ricinus communis] Length = 370 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 156/355 (43%), Gaps = 38/355 (10%) Query: 17 GCTVGPEYTKPHMPLL-----PTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIAL 69 GC P Y +P + + P F + TLK WWE F D LN LV+ AL Sbjct: 26 GCASAPVYQQPAIDVPAAWQSPVPFQAARPDDA----TLKGNWWEIFGDAGLNALVRQAL 81 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIP--------NLKTNSTGQ 119 +N ++ A R+ A+ + A LFP + A + + N+ ST Q Sbjct: 82 ARNQSLAGAAARLEQARSQVTVSAAGLFPQASLQAGAARQKTSANRPLNAYNVSNQSTVQ 141 Query: 120 ------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFK 171 +++ DLFG R H S A + A D A+L ++++L Y R Sbjct: 142 NNYQLGFAVNYEADLFG-RVHSNVSAAEASAQQAGADFENARLVLVAELAADYFTLRELD 200 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + ++ L L K + + GA + L L + ++ + + + + L + H Sbjct: 201 AEIGVLNESLALQHKAYDFIQARHELGAATGLDLAQQQSLLDASRTQLELLNQQRAQYEH 260 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++TL G PA F + ++ P + +G+PAD+++ RPD+ E+ +A + A Sbjct: 261 ALATLTGTPAPSFT--LAPAASALTPPA---LPVGLPADVLQRRPDVAAAERAVAAANAN 315 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 IGIA++ +P+++L + + + WS G L +FD GK ++N Sbjct: 316 IGIARAAYFPTINLQANGGWDSNQMSRLIEAPSLLWSLGAALTQTLFDAGKTRAN 370 >gi|156713288|dbj|BAF76385.1| MepC [Pseudomonas putida] Length = 366 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 158/335 (47%), Gaps = 12/335 (3%) Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 S +++DLFG+ R + E +L S+ ++ +++ + +Y + + + + Sbjct: 20 SAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALFKLTEET 79 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY- 239 L Y+++ L+ G S L + + ++ ++ +V++++ LLG Sbjct: 80 LKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTG 139 Query: 240 -PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 PA + ++ ++ + G+P+D+++ RPDI+ E L + A IG A++ Sbjct: 140 IPA-DLAKPLELDADQL-----AEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAA 193 Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +PS+SL GS++ + F G W F P++ LPIF+ G +K+++ ++ Sbjct: 194 FFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINV 253 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +++T+ A +EV + L + ++ + + V+ ++ L+ YR G S L L Sbjct: 254 AKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFL 313 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 D +R + L + S V+LY A+G G+ Sbjct: 314 DAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 348 >gi|254247351|ref|ZP_04940672.1| outer membrane efflux protein [Burkholderia cenocepacia PC184] gi|124872127|gb|EAY63843.1| outer membrane efflux protein [Burkholderia cenocepacia PC184] Length = 363 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 3/196 (1%) Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THD 314 NL + G+P+DL+ RPD+ E+ L + A IG A++ +P +SL G+ T Sbjct: 135 NLLTDVPAGLPSDLLTRRPDVMQAEQTLLAANANIGAARAAFFPKISLTGAFGTASPTLG 194 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 F WSF P + LPIF+ G+ +N+ A + + +++ + +A +EV + L Sbjct: 195 GLFKAGTAAWSFAPSIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLA 254 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + + + L+ ++ LS + Y+ G S L +L + + L A+ Sbjct: 255 ARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVDSYLSVLTAQTDLYSAQQSLISARLA 314 Query: 435 LAKSYVDLYIAIGSGY 450 + VDLY A+G G+ Sbjct: 315 RWTNLVDLYRALGGGW 330 >gi|167908492|ref|ZP_02495697.1| outer membrane efflux protein [Burkholderia pseudomallei NCTC 13177] Length = 619 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|167742533|ref|ZP_02415307.1| outer membrane efflux protein [Burkholderia pseudomallei 14] Length = 292 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 134/287 (46%), Gaps = 13/287 (4%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++++++ + Y+ + + + L + + +L+ L+F G S+L L + + Sbjct: 15 AEISLVASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTV 74 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 +++ + ++ ++ + L+G P + L N Q NL I G+P+DL Sbjct: 75 VETALASQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDL 131 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPDI E+ L + A IG A++ +P +SL G+ + T F WSF P Sbjct: 132 LTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAP 191 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF+ G+ +N+ A + + +++ + +A +EV + L + + + L+ Sbjct: 192 NIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALER 251 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 ++ LS + YR G S L +L + DL A++QL Sbjct: 252 NEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQL 291 >gi|302188431|ref|ZP_07265104.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 498 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/450 (19%), Positives = 207/450 (46%), Gaps = 45/450 (10%) Query: 2 NILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKW 52 I+R ++ + F ++ +GC +G KP H L T +I ++ + +W Sbjct: 4 RIIRGLWPVGLLAFTLVTSGC-IGTHGIKPQGSVLHADNLATDQAIQSAALDAHWPAAQW 62 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAK------ENILSVRADLFPSSYASISH 106 W ++ D L++ V++A + ++ A R+ AK E+ SV+ S + + H Sbjct: 63 WRAYGDAQLDRWVEMATLGSPSLALAAARVRQAKAMAQVAESAESVQ---LQGSASLMRH 119 Query: 107 RF----------IPNLKT-NSTGQLDSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAKL 154 + + + ++ ++ L + +DL+G+ R+ +L A A+ A+L Sbjct: 120 DWPEDQFYGPGALADTRSWDNNAALGLSYALDLWGRERNASEQAVDLAHASAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIQLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G + +++ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGQGA-ALRRPALSLHTALTLPS--ALPAELLGQ 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLLGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKL 386 + LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 357 ISLPIFDGGRLRAELGRASAAYDQAVAHYNQTLVMALKGVSDQLIRRASMDKQQALAAE- 415 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +V +K+ +++I +++G L++L+ Sbjct: 416 --SVASAQKTYDIALIAWQRGLTDYLNVLN 443 >gi|91774728|ref|YP_544484.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] gi|91708715|gb|ABE48643.1| RND efflux system, outer membrane lipoprotein, NodT [Methylobacillus flagellatus KT] Length = 464 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 105/477 (22%), Positives = 209/477 (43%), Gaps = 54/477 (11%) Query: 14 LLAGCTVGPEYTK--PHMPLLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++ C + P TK P + L P +S N + + + W E F D L L+ A+ Sbjct: 1 MVQSCAI-PTITKKEPQVAL-PEHYSHANNSAAGADSAARVNWKEFFEDQHLAALIDTAI 58 Query: 70 QQNLTILQATERINAAKENILSVRADLFPS------SYASISHRF--------------- 108 N I +RI+ A+ IL+ + + PS + + R+ Sbjct: 59 ANNKEINILMQRISVAENEILARKGEYLPSVGIGATAETEKTARYTRNGAIEEGLEIKEG 118 Query: 109 --IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 P N L + W++D++ + R+ + +A ++ Y K +++ L+ + Sbjct: 119 KHFPKYFGNYQFGLVASWELDVWKKLRNA-TKVATME--YMASVEGKRFLVTNLVAEIAN 175 Query: 167 ARHFKERISIAHQILDLYKKNIELSH------LKFTQGA-TSKLSLVKLEAEIKSIESDI 219 A + E +++ ++ LD KNI + + Q A T+ L++ + EAE+ +S Sbjct: 176 A--YYELLALDNE-LDNLDKNIAIQENALGVVRELQQYARTTSLAVKRFEAEVNKNQSQR 232 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 +++ + I+ LLG + + S F +++GIP+ L+ NRPDIR Sbjct: 233 YEVKQKIVETENRINFLLGRTP----QPIARASAGFMDIKPKVLDVGIPSQLLENRPDIR 288 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLYLP 333 + +L + I +AK++ YPS +L + N P Y + SFG L P Sbjct: 289 QAQLELEAAKLNIEVAKANFYPSFALKAGLGFQAFN--PRYLLNMPESVAGSFGGDLIAP 346 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + ++ I + + A + +++ ++NA EV L++++ K V+ Sbjct: 347 LVNRNAIIATYKNASAEQIRAAYEYEQAIINAYSEVATQLSNLDNLDKNYQLKNRQVDTL 406 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S+ +S ++ R +++L +R + ++DL K++ + ++LY A+G G+ Sbjct: 407 TNSIEISNQLFQSARADYMEVLLTQRDALEAKMDLIETKQKQIMAMINLYRALGGGW 463 >gi|126207745|ref|YP_001052970.1| outer membrane protein [Actinobacillus pleuropneumoniae L20] gi|165975715|ref|YP_001651308.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149528|ref|YP_001968053.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252495|ref|ZP_07338658.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245071|ref|ZP_07527164.1| hypothetical protein appser1_2790 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247243|ref|ZP_07529292.1| hypothetical protein appser2_2410 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249470|ref|ZP_07531458.1| hypothetical protein appser4_2820 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307254026|ref|ZP_07535873.1| hypothetical protein appser9_2790 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256284|ref|ZP_07538067.1| hypothetical protein appser10_2890 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258481|ref|ZP_07540218.1| hypothetical protein appser11_2800 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260715|ref|ZP_07542404.1| hypothetical protein appser12_2890 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262847|ref|ZP_07544471.1| hypothetical protein appser13_2720 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096537|gb|ABN73365.1| probable outer membrane protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875816|gb|ABY68864.1| probable outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914659|gb|ACE60911.1| probable outer membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648463|gb|EFL78656.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306853960|gb|EFM86172.1| hypothetical protein appser1_2790 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856216|gb|EFM88370.1| hypothetical protein appser2_2410 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858463|gb|EFM90531.1| hypothetical protein appser4_2820 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306862951|gb|EFM94898.1| hypothetical protein appser9_2790 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865110|gb|EFM97010.1| hypothetical protein appser10_2890 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867385|gb|EFM99236.1| hypothetical protein appser11_2800 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869554|gb|EFN01342.1| hypothetical protein appser12_2890 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871752|gb|EFN03472.1| hypothetical protein appser13_2720 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 464 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/393 (21%), Positives = 175/393 (44%), Gaps = 62/393 (15%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW+ +ND+ LN LV+ A+ NL + ++ +N A N V A+L P+ Sbjct: 52 QWWQGYNDSQLNSLVEQAIANNLDLAKSAIAVNRALYNANLVGANLVPTFSGSGSSSAAK 111 Query: 100 SYASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 S S++ + T S T + +DL+ QR +S A + D+ +L++ Sbjct: 112 GVGSTSNQISTGISTISHTASFKLSYTLDLW-QRLADAASAAEWEHKATVEDLKATRLSL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ ++ +Y ++K+ I++ + ++ Y++ + + K+ GA +L++ + + + Sbjct: 171 LNSVVSTYYQIAYYKDAIAVIERTINNYQQISTILNNKYAAGAIDRLAVEQAQQATLNAR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------------I 263 + + + + + + LL N +PN +P I Sbjct: 231 NSLISERTNLKTAEQTLRNLL----------------NLKPNQALPTRYPSILGVKLQGI 274 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-------HDNS 316 ++ +P I NRPD+ + +L + + + +P+++L GSI+ + DN Sbjct: 275 DLNVPVSAIANRPDVVARLNRLQSAFKSLTATEKSWFPTVTLGGSISASASKVANISDN- 333 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 P N SF LP D ++K+N++ +ES + +++TV +A+ E++ + Sbjct: 334 -PVGNGVISFD----LPFLDWNRVKNNVKISESDYMTAKLNYEQTVTSALNEIDQHYYAY 388 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + LQ A E H K +S NY + RY Sbjct: 389 QQSLSSYATLQQAYE-HDKRIS----NYYKNRY 416 >gi|187924395|ref|YP_001896037.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] gi|187715589|gb|ACD16813.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phytofirmans PsJN] Length = 699 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 93/422 (22%), Positives = 199/422 (47%), Gaps = 32/422 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 W + F D L+ L+ AL N T+ QA R+ AA + +A P AS S Sbjct: 260 WADQFGDAQLSSLISEALSSNPTLDQARARVAAAFAYTETAKASTMPRVDASYSLTREQL 319 Query: 106 --HRFIP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 F+P + +T + G L + + +DL+G+ R ++++++ ++ A ++ KL + Sbjct: 320 SNTTFLPPPFGGSWQTENRGVLGASFDLDLWGKNREALKAAISQSQASQADAEVVKLTLT 379 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y AR + R IA + + ++ ++ + G +++ + A + + Sbjct: 380 TSIARAYNQLARLYVLR-DIAQKEITQRERIDRITAGRIATGLDTEVERKTVHANLATSR 438 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + +L+ + I+ LLG L + + + + +P N+ PADL+ RP Sbjct: 439 ATLKSLDGRILTTRYQIAALLGAGPDRGLQ-ISRPTLGLGDEVRLPDNL--PADLVSRRP 495 Query: 277 DI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKL 330 +I R++ +A V + AK++ YP ++L+ +I L + S GP + Sbjct: 496 EIVAARWRIDAMAHDVKE---AKAEFYPDINLSAAIGLDAFGFGRFLTAASRTASVGPAI 552 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +LPIFD G++++ ++ + + +T++ A+ EV L ++ + Q A Sbjct: 553 HLPIFDAGELRAQLKGRYADFDYAVAAYNQTLVTALNEVATQLADVHSTDAQLVDAQAAQ 612 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGS 448 E +++ L++I Y+ G + L +L+++ + D ++A ++ + + L A+G Sbjct: 613 EAARQADELALIQYKAGLTNQLTVLNVD--LNALSADQAVANLRMNRRDQQIALASALGG 670 Query: 449 GY 450 G+ Sbjct: 671 GF 672 >gi|241768034|ref|ZP_04765545.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241360702|gb|EER57651.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 276 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 16/246 (6%) Query: 6 AIFSLFIVL-----LAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 A L+IV LAGC V P+ P P+ P +S + + +WW+ FND Sbjct: 22 ACVGLWIVTSALAALAGCASPVVPDGGLPPTPV-PLAWSTPAPEGTVATPLAQWWQRFND 80 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG 118 L +LV +ALQ N ++ A + A+ A L PS +S S + + +NSTG Sbjct: 81 PQLTQLVALALQANTSVRSAQAALQQARAQADVQAAGLLPSVGSSASAQR--SRTSNSTG 138 Query: 119 Q-----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 D+ W+ D+FG+ R + +S A+ +A A + ++++ ++ +Y++ R ++ Sbjct: 139 NSFQAGFDASWEPDVFGRLRSGLNASEADARAAEAGLADVQVSLAAETAVTYVELRGLQQ 198 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R++IA L ++ ++++ + G T+ L + A + + IP LE S + H+ Sbjct: 199 RLAIARSNLASQQETLQITQWRLQAGLTTSLVAEQARAAAEQTAAQIPALESSLAQSRHS 258 Query: 233 ISTLLG 238 ++ L G Sbjct: 259 LAVLTG 264 >gi|296115769|ref|ZP_06834395.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] gi|295977746|gb|EFG84498.1| secretion system type I outer membrane efflux pump lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] Length = 492 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 41/395 (10%) Query: 7 IFSLFIVLLAG-CTVGPEYTKPHMPLL----PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + L + +AG C+ P +T +PL P+ F + D WW S+ND +L Sbjct: 12 VAGLVVTAMAGGCS--PFHTA--VPLSRVTPPSHFVQAPAGTDPATDLTTWWRSWNDPAL 67 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKT 114 ++V+ AL N I A + + A+ + R+ L+P+ +S R L Sbjct: 68 TRMVEAALAANPDIRIARDNVLQARAAHVIARSALYPTVGATGNIGGGGMSWRNPAALSQ 127 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLANL-----DSAYAQVDIAKLNVISKL 160 S G +D W+ DLFG RH +S A +AY + ++ V + + Sbjct: 128 MSDGDPANDGHLAGIGASWEPDLFGG-RHADSRAARALMLGQQAAYHGM---QMLVAADV 183 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ A+ + +I + + L + ++ + +F G + ++ ++ ++ P Sbjct: 184 AENYLRAQGIQRQIDLLDRSLGILQRLRTYTQARFAAGQAVSADMRAVDEKLSLQQAQRP 243 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L + ++ ++ L G A E + F P P+ +P ++ RPD+ Sbjct: 244 LLVAEYDLHRRRLAILSGQ-APESAPSLPSPGAFFVP--AAPVGE-MPDSVLARRPDVLA 299 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGY-NTHWSFGPKLYLPIFDK 337 + ++ ++ ++ AK+DL P L G + PG T YLPIF Sbjct: 300 RRDEVDAALQRLKSAKTDLLPRFGLEFFGGDGRLRFDGIPGLSGTGGLIALTTYLPIFTA 359 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G++ + I A + + TVLNA+ EVE+A Sbjct: 360 GRVHARIHAAHARLDAAVAGYDRTVLNALAEVEDA 394 >gi|264678314|ref|YP_003278221.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262208827|gb|ACY32925.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 494 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 99/465 (21%), Positives = 190/465 (40%), Gaps = 42/465 (9%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSLNKLVKIALQ 70 GC + GP + +P L + +S +L D +WW D LN+L+ AL Sbjct: 33 GCASQGPAH-QPLTRLGSADVGLNDSASLSAADATALASSQWWTGLGDARLNQLIDQALA 91 Query: 71 QNLTILQATERIN------AAKENILSVRADLFPSSYAS--ISHRFIP-----NLKTNST 117 + ++ + R A VR L + ++ IP N+ + Sbjct: 92 GSPSLAASNARFEKAAALATASSTASDVRGTLSADATRQRYTANGMIPAPIAGNIYNSGN 151 Query: 118 GQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q W D FG+ ++++L +A A A + +++ SYI + + Sbjct: 152 LQAGLSWSPDFFGKHGADLQAALGQARAARADSAAAANQLAAQVARSYIALARLIAQKEV 211 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + + LS + G S++ L + +A + + I L + + I+ L Sbjct: 212 AERTLGQRQSLLSLSEQRTRAGLDSQVELTQAQAGMPDARTQIEMLGEQITLARRTIAVL 271 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 N P L + P+ + ADL+ RPD+ ++ + I Sbjct: 272 C--------AQAPDAQNALSPRLSVLRIQPVPQALGADLLGRRPDVVAARWRVEAATQGI 323 Query: 293 GIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++D YP ++L + AL DN G + P L LPIFD ++++ +R ++ Sbjct: 324 ESARADFYPDVNLTAFVGLNALGLDNLLQGSSRQMGITPALRLPIFDGKRLRAQLRGKQA 383 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + VL+A+K+ +A+ S+ ++ ++ +++ ++ Y+ G Sbjct: 384 DLDTAIAQYNGAVLDAVKQAGDAIASVQSLQRQQQLQTESLSKAERAYDFAVQRYQAGLG 443 Query: 410 SLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + +L+ E ++ VDL R+L + V L A+G G++ Sbjct: 444 SQITVLNTETQLINQRRLAVDLQ--AREL-DTRVALAAALGGGWS 485 >gi|330898441|gb|EGH29860.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 308 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 19/297 (6%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ + KE + + L Y+++ L+ G +S L L + ++S + + Sbjct: 2 AYMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQY 61 Query: 223 EKSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 ++ + +++ LLG PA+ L ++ + G+P+DL++ RP Sbjct: 62 QRLVAQDQNSLVLLLGTSLPDNLPASHLLD----------SDMLTEMPAGLPSDLLQRRP 111 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 DI E L + A IG A++ +PS+SL S + F G + W F P + +P Sbjct: 112 DILQAEHSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIP 171 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G +++++ ++ + +++ + A +EV + L S + + + V + Sbjct: 172 IFNAGNLRASLDYSKIQKEINVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAAN 231 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ YR G S L LD +R+ + L + S V+LY A+G G+ Sbjct: 232 QDYYRLAERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGW 288 >gi|195952387|ref|YP_002120677.1| RND efflux system, outer membrane lipoprotein, NodT family [Hydrogenobaculum sp. Y04AAS1] gi|195931999|gb|ACG56699.1| RND efflux system, outer membrane lipoprotein, NodT family [Hydrogenobaculum sp. Y04AAS1] Length = 465 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/384 (21%), Positives = 175/384 (45%), Gaps = 44/384 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW++FND +L+ V +AL+ N L A + I +K +L + LFP+ ++S Sbjct: 57 WWKTFNDKTLDYYVDLALKNNTNYLIALKNIELSKAYVLENSSVLFPNFNLNVSGTRQKL 116 Query: 112 LKTNSTGQ-------------LDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAK 153 K TG+ + + ++IDLF + R + E+ + + A A + Sbjct: 117 SKRTPTGRFFSIAPYTTYNLSVSASYEIDLFAKALNAYRYYKENVKISKEEAKAIKNALI 176 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 +N ++ ++ H+ I + + +++ KKN+EL+ + G TS ++ + ++ + Sbjct: 177 MNTVNNYY-QIVENAHY---IELLEKEINIAKKNLELAQTNYKAGLTSYQNVDQAKSSLL 232 Query: 214 SIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY------IPINIG 266 ++E + T + ++ V+ + LLG YP +F+ ++Y I Sbjct: 233 NLEQTLETYKAQRKVLVNAFAYLLGEYP------------EDFKFSIYGTLPKDFAIPKA 280 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH 323 IP+ ++ RPD++ + +S + IA ++ +PS L GS +N + Sbjct: 281 IPSTVLTTRPDVKEAMYNVINSAYEKKIALANFFPSFDLTGSYGFQSQQLNNLVTQPSIS 340 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+FG + PI + + + ++ + + + +++TVL A KEV++A+ D Sbjct: 341 WNFGLNIIEPILNWNQNLGLYKASKVALAQSILNYRQTVLKAFKEVDDAIAQYKTDDINY 400 Query: 384 TKLQHAVELHKKSMSLSMINYRQG 407 L+ + +++ NY+ G Sbjct: 401 KSLKKTYQTALDQYRIALANYKAG 424 >gi|171319163|ref|ZP_02908283.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171095643|gb|EDT40603.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 499 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/417 (20%), Positives = 172/417 (41%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-IP 110 WW + +D LN L+ AL N + A R A+ ++ +A P S + P Sbjct: 70 WWRTLHDPQLNALIDEALAGNPDLATADARAREAQALVIEAQAARVPHVVGRASAKGERP 129 Query: 111 NLKTNSTGQ------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + STG+ L W +DL+G RR E++L +A A++ + Sbjct: 130 SGTQFSTGEGGGFFSHTREMNLGFSWDLDLWGGRRAAWEAALGEARAAQVDARAARIMLS 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y++ + ++ +A + + L+ + T+G + + E+E+ + Sbjct: 190 VNVARAYVNLAYAFDQQDVARAEYGRADEALTLTRQRVTKGIDNVSQQRQAESEVAAAAR 249 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ ++ LLG L + P + + +PA L+ R D Sbjct: 250 EQARAAQAIGSARIALAILLGAGPDRGLALARPAP---LPIAALAVPADLPAALLGRRAD 306 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 I ++ + + A++D P++SL I L F + ++ GP + LPI Sbjct: 307 IVAARWRVEAASRNVVAARADFLPNVSLTALIGLATRGGASLFQAASRTYNIGPAVSLPI 366 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + +R+ ++ + +T++ AI EV + L ++ Q A++ Sbjct: 367 FDGGERRGVLRKRDAQYDLAVAGYNKTLIGAIGEVADDLHRLDSLAMQADAQQRALDSAT 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR G S LD L + + +++ + Q A + L A+G G+ Sbjct: 427 DAWRLADARYRAGVGSYLDALVVRQQLLVASREVAALRAQRADQSLQLVAALGGGFR 483 >gi|207723247|ref|YP_002253646.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] gi|206588445|emb|CAQ35408.1| outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] Length = 431 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 182/409 (44%), Gaps = 21/409 (5%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF--------I 109 + LV A+ + + A R+ A++ + R DL+PS RF Sbjct: 1 MRALVDEAIHDSPNLQVAFARVRASRAMADAARGDLYPSVGLDAEMTRQRFSSYDLFEGT 60 Query: 110 P---NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 P N T S QL + +D +G+ R +ES+L++ + A+ A+L + + + +Y Sbjct: 61 PLGGNWVTESKIQLGVSYDLDFWGKNRAALESALSDDQAMEAESQAARLMLSTSVARTYA 120 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +A + + ++ + LS + G +++ + A I + ++++ +++ Sbjct: 121 KLAALYAQRDVAERTIAQRRELVSLSGQRLRAGLDTQVETTQARANIAAAQTELEQVDEQ 180 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + ++ LLG L + + + Q +P ++ I DLI RPD+ ++ Sbjct: 181 IALTRNQLAALLGKGPDRGLA-IARPTLLAQATPRLPDHLSI--DLIGRRPDLVAARWRV 237 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + + +AK+ P +SL + L +N G GP L LPIF+ GK+++ Sbjct: 238 EAASKNVDVAKAQFLPDISLTAFLGLASIAPENLLLGNARQLGIGPALRLPIFEGGKLRA 297 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+R + ++ +T+ A+ + + +TS++ + + A+ +++ SL+ Sbjct: 298 NLRGKYAGYDAAVASYNQTLTEALHDTADQITSLHSVDTQIDIQRTALAEAERAYSLART 357 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G + L +L+ E + ++ + + + + L A+G GY Sbjct: 358 RYGAGLGTQLTVLNAESTVLQQRRLAALLQARRLDAQMALIKALGGGYT 406 >gi|326387053|ref|ZP_08208663.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] gi|326208234|gb|EGD59041.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] Length = 479 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 104/495 (21%), Positives = 205/495 (41%), Gaps = 65/495 (13%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--------NIDTLKW 52 MN RA+ ++ L GC + P Y +P P+ P G S ++ ID + W Sbjct: 1 MNRFRALTVGTLIALGGCNMAPAYVRPAPPV-PATLPQGESYPVLPQADGAIDAIDAIGW 59 Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF--- 108 F D L K++ AL N + + + A+ A P+ A S R+ Sbjct: 60 NTFFTDARLRKVIADALANNRDLRASIANVAVARAQYRGTHAAELPTITAVPSASRYRGS 119 Query: 109 ----------IPNLKTNS-----TGQLDSDWKIDLFGQRRHI-----ESSLANLDSAYAQ 148 N T S G + S +++DL+ ++R++ E+ LA+ + A Sbjct: 120 VSSSGYVSGGGGNSPTTSEAYGIAGGIAS-FELDLWSRKRNLTRAAFETWLASAEGNKA- 177 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 A + +++++ +++ + ++IA + L + + +S + QG + L V+ Sbjct: 178 ---ATIALVAEVANAWLTIGADSDALAIARETLASREATLAVSRQREAQGIGTGLETVQA 234 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL------YIP 262 + ++S +D+ + + L+G + S+N L Sbjct: 235 DTLVQSARADVAAYVTDLAQARNALQLLVGTTVS---------SDNLPTGLGREDAVLAS 285 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-------NGSIALTHDN 315 + +G+ + ++ RPD+ E +L + A IG A++ +P ++L +GS++ D+ Sbjct: 286 LPVGLDSAVLLRRPDVLAAEHQLRAANANIGAARAAFFPQINLTTLAGLASGSLSGLFDS 345 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 G + +FD G + S+++ A +S + T+++ V NA +V NAL Sbjct: 346 ---GGTFRYGLAASATQTLFDGGALASSLKAARASREAAVATYEKAVQNAFADVANALAR 402 Query: 376 INE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 D+++ + + V K+ +++ Y G + L LD R L + Sbjct: 403 RGTIDEQLAAQRAY-VASADKAATITRSRYDTGVDTYLAALDAARTAYTARQALVGVRLA 461 Query: 435 LAKSYVDLYIAIGSG 449 A + V LY +G G Sbjct: 462 RATNMVTLYEVLGGG 476 >gi|323943106|gb|EGB39264.1| outer membrane efflux protein [Escherichia coli E482] Length = 195 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 9/190 (4%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNT 322 G+ + ++ RPDI E L + A IG A++ +PS+SL I+ + F + Sbjct: 9 GLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSG 68 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +AL Sbjct: 69 MWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQ 128 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSY 439 ++ Q + + ++ + Y+ G S L++LD ER AT + +DL+ A RQ+ + Sbjct: 129 ISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNE-- 185 Query: 440 VDLYIAIGSG 449 + LY A+G G Sbjct: 186 ISLYTALGGG 195 >gi|53716924|ref|YP_106003.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|238561421|ref|ZP_00442070.2| outer membrane protein OprM [Burkholderia mallei GB8 horse 4] gi|254200853|ref|ZP_04907218.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|254204822|ref|ZP_04911175.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|52422894|gb|AAU46464.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|147748465|gb|EDK55540.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei FMH] gi|147754408|gb|EDK61472.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia mallei JHU] gi|238524648|gb|EEP88080.1| outer membrane protein OprM [Burkholderia mallei GB8 horse 4] Length = 619 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLGDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|78061573|ref|YP_371481.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77969458|gb|ABB10837.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 468 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 79/357 (22%), Positives = 160/357 (44%), Gaps = 22/357 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHR 107 WW SF D L+ L+ AL+ N + A R+ A+ +L P + ++S Sbjct: 66 WWRSFGDPQLDALIDDALRANNDLAIAAIRVYRAQLQAGLADTNLTPNVSLGANGAVSRT 125 Query: 108 FIPNLKTNSTGQLDS-DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + ++G S ++IDL+G+ + +++ D+ A ++ A+L++I Y Sbjct: 126 LDTHQMSRTSGVTGSLSYEIDLWGRLAALRDAARWEADATAADLEAARLSLIGTTASLYW 185 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +I++ + + + + + T GA S L L + E + + + L + Sbjct: 186 QIGYLNRQIALGDANIAYAVRTLAVVRSQHTAGAVSGLDLAQAEQSLAAQRAAQTQLIQQ 245 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 N H ++ L P + P + G+PA L+ RPD+R E +L Sbjct: 246 RTENRHALAILFDRPPQQLAAEPAALPVAAPPE----VAAGLPASLLGRRPDLRAAEFRL 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSN 343 +S+A++ ++ YP+ +L G A T S N + G L LP ++ Sbjct: 302 RESLAQVDATRTSFYPTFTLTGQ-AGTSSTSLERVLMNPVGTLGLGLALPFIQWNTMQLQ 360 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 I+ +++ +E + +++ + A+ EVENAL++ ++Q E ++++SL+ Sbjct: 361 IKVSKTQYEEAVVGFRQKLYTALAEVENALSA---------RVQLEREAEQRALSLA 408 >gi|46143366|ref|ZP_00135398.2| COG1538: Outer membrane protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 464 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/393 (21%), Positives = 175/393 (44%), Gaps = 62/393 (15%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW+ +ND+ LN LV+ A+ NL + ++ +N A N V A+L P+ Sbjct: 52 QWWQGYNDSQLNSLVEQAIANNLDLAKSAIAVNRALYNANLVGANLVPTXILRNVCSAAK 111 Query: 100 SYASISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 S S++ + T S T + +DL+ QR +S A + D+ +L++ Sbjct: 112 GVGSTSNQISTGISTISHTASFKLSYTLDLW-QRLADAASAAEWEHKATVEDLKATRLSL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ ++ +Y ++K+ I++ + ++ Y++ + + K+ GA +L++ + + + Sbjct: 171 LNSVVSTYYQIAYYKDAIAVIERTINNYQQISTILNNKYAAGAIDRLAVEQAQQATLNAR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------------I 263 + + + + + + LL N +PN +P I Sbjct: 231 NSLISERTNLKTAEQTLRNLL----------------NLKPNQALPTRYPSILGVKLQGI 274 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-------HDNS 316 ++ +P I NRPD+ + +L + + + +P+++L GSI+ + DN Sbjct: 275 DLNVPVSAIANRPDVVARLNRLQSAFKSLTATEKSWFPTVTLGGSISASASKVANISDN- 333 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 P N SF LP D ++K+N++ +ES + +++TV +A+ E++ + Sbjct: 334 -PVGNGVISFD----LPFLDWNRVKNNVKISESDYMTAKLNYEQTVTSALNEIDQHYYAY 388 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + LQ A E H K +S NY + RY Sbjct: 389 QQSLSSYATLQQAYE-HDKRIS----NYYKNRY 416 >gi|325578272|ref|ZP_08148407.1| NodT family efflux transporter [Haemophilus parainfluenzae ATCC 33392] gi|325160008|gb|EGC72137.1| NodT family efflux transporter [Haemophilus parainfluenzae ATCC 33392] Length = 455 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 170/394 (43%), Gaps = 41/394 (10%) Query: 15 LAGCT-VGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LAGC +G Y + QF++ + WW +ND+ LN++V+ A Sbjct: 17 LAGCANIGDSYKASQQDYQNYAEITKQFNVKEN----------WWALYNDSQLNRVVEQA 66 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT--NST----GQLDS 122 L N + +A+ +N A N A+L P+ S NLKT NST G L+ Sbjct: 67 LVNNKDLAKASIAVNRALYNANLAGANLIPAFSGSTQSSAGKNLKTGGNSTISHKGALNV 126 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQI 180 + +DL+ QR + A D+ KL++I+ ++ +Y +F + IS + Sbjct: 127 SYTLDLW-QRLADTADAAEWSHKATAEDLEATKLSLINSVVTTYYQIAYFNDAISTTQES 185 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + Y + + +QG S+ + + + + +++ + + + LL Sbjct: 186 IKYYNDISSIMQRRLSQGVADSASVDQAQQAVLNARNNLINYQTQRKTAEQTLRNLLNLK 245 Query: 241 ATEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 E L+ NF P++ + +N+ +P +I NRPD++ + +L+ + + Sbjct: 246 PEEALNI------NF-PHILNVKNVGVNLNVPVSVIANRPDVKGYQYRLSSAFKNAKATE 298 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY---LPIFDKGKIKSNIRRAESSAQE 353 +P ++L GS LT + G H G L LP + +K N++ +E+ + Sbjct: 299 KGWFPEMTLGGS--LTSSGTKVGNTLHNPVGTGLIGISLPFLNWNTVKWNVKISEADYET 356 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + +++++ A+ +V+ + + + LQ Sbjct: 357 ARLNYEQSITKALNDVDTNYFAYTQAQSAFANLQ 390 >gi|320328293|gb|EFW84297.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. glycinea str. race 4] gi|330878578|gb|EGH12727.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. glycinea str. race 4] Length = 490 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 31/391 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINI---DTLKWWESFNDTSLN 62 L ++ +GC++ PEY +P +P+ Q S G++ I + + E L Sbjct: 22 LLSLVFSGCSLIPEYQRPALPVPANQLSAVVPAGDASIAIALTADEEALAAELSPKGELR 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRFIP 110 L++ AL N A R++ A+ RAD FP+ A + R+ Sbjct: 82 VLLQSALTFNRDFRVALLRVDEARAMRGITRADRFPTIAAGVQRNRQHFDNAAADQRYGQ 141 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ S G SD+++D FG+ R + + + L S Y Q A+ +++++ +++ R Sbjct: 142 DISIASVG--ISDFELDFFGRVRSLSEAARHDYLTSTYGQ-QAARSALVAEVARAWLAER 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 A + D ++ + + QGA S L+ E + + + Sbjct: 199 LAAAVQQDAQTVNDARLMLVKAAEEQQRQGAISLDDLMAQRLETLTAQQQVQDALSDHAN 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLA 286 + L GY A L ++ L P +P+ + R DIR +E+ L Sbjct: 259 ASQALLLLTGYSAV--LPATTPETPALTAALVEPPAWLSNLPSQRLLERFDIRQREEALK 316 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S A IG A++ +PS+ L+ S+ L D+ F + W F P+L LP+FD G+ ++N Sbjct: 317 ASNANIGAARAAFFPSIKLSTSVGLQSDSLRTLFSNGSGTWLFSPQLNLPLFDGGRNQAN 376 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALT 374 + A Q +++ + NA +E+ LT Sbjct: 377 LDLAHVRQQIAVAEYEKAIQNAFREMAGVLT 407 >gi|253997031|ref|YP_003049095.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera mobilis JLW8] gi|253983710|gb|ACT48568.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera mobilis JLW8] Length = 515 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 100/427 (23%), Positives = 184/427 (43%), Gaps = 42/427 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKW-----WESFNDTSLNKLVK 66 ++LL GC T L P + G K + T+ W W+ ++D L+ L+ Sbjct: 37 LLLLVGCVSMSGITPQSELLKPGKLDAG--KTITQAATIAWPKQDWWKIYHDPQLDSLIA 94 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFIP-------N 111 A++ + T+ A R+ + S RA+ P+ ++S +FIP + Sbjct: 95 KAVEGSPTLNAAKARVALTQAVADSARAETLPNISGNVSVIRERFTELQFIPPPWGGHSD 154 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARH 169 +T L D +DL+G++ I + SL +A A++ +L + S +I SY+ A Sbjct: 155 WNNKATIALAHD--LDLWGRQESIWQGSLDESKAAAAEMQQVRLGLESAIIRSYVQLAME 212 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 F R IA + K+ ++ G +++ +V+ E E+ + + I ++ + Sbjct: 213 FALR-DIAEEHQSQLKERTAIARRALAAGIGTQMEVVETETELPTAHAHIESINTRIDLL 271 Query: 230 VHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H ++ L G P +Q+ S + + +P + PA+LI RPD+ + + Sbjct: 272 RHQLAALSGQGPGAG--EAIQRPSMSLNHLVGLPDQL--PANLIGRRPDVLAYRWHVEAA 327 Query: 289 VAKIGIAKSDLYPS---LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 I AK+ YP+ L+ G AL + GP + LPIFD G+ + N+ Sbjct: 328 SHNIEGAKAAFYPNINLLAFVGFQALGFNQLLSSAAGIAGVGPAISLPIFDGGRRRGNLS 387 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSI-------NEDKKIVTKLQHAVELHKKSMS 398 +S ++ E V+ A+++V + L + N+ +T A L +KS Sbjct: 388 AKTASYDIAVESYNEAVIRALQDVSDQLVILQSNIKQRNDAALAMTSAHKAHMLAEKSYH 447 Query: 399 LSMINYR 405 + NY+ Sbjct: 448 AGLTNYQ 454 >gi|32267358|ref|NP_861390.1| hypothetical protein HH1859 [Helicobacter hepaticus ATCC 51449] gi|32263411|gb|AAP78456.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 503 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 111/490 (22%), Positives = 210/490 (42%), Gaps = 55/490 (11%) Query: 4 LRAIFSLFIVLLAGC-----TVGPEYTKPHMP--------LLPTQFS--IGNSKNLINID 48 +R I ++ GC T+ + H+P LL +Q + I S NLIN++ Sbjct: 1 MRKICLFVGMIYTGCSTPIPTLEQSAKQTHIPAAFSNTKDLLTSQNTTKIKQSTNLINME 60 Query: 49 TLK--------WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS 100 +L+ + +D L++++ +AL+ N +L RI AK + A++FP+ Sbjct: 61 SLQEQPFRLQQFMALIDDKQLHQILHLALENNTNVLSMISRIKQAKSQMKINTANMFPTI 120 Query: 101 YASISHRFIPNLKTNST-----------GQLDSDWKIDLFGQRRHIESSLANLDS---AY 146 A ++ +I + + + W++DLFG+ + AN S A Sbjct: 121 NAGLNSSYIDRRTLSQSTIIRPGANSINANISMSWELDLFGKLNALRQ--ANKKSYLQAQ 178 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK----NIELSHLKFTQGATSK 202 + + A++++I+++ Y R ++IA L ++ NI+ L +T + Sbjct: 179 SNLAFAQISLIAEVATLYFTLRDNAYSLAIAESTLKNLEQIQAINIDKYKLGLIDVSTYQ 238 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF---LHYMQKQSNNFQ--P 257 + A+ + ES L +F N + + LL A E + ++ + F Sbjct: 239 SFVANTTAQKNTYES----LSYTFEQNKNALLVLLNITADELAQNIDFLDSINYTFPHIA 294 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 N Y+ +P+D++ +RPDI+ L + K A + P++SL+GSI ++ Sbjct: 295 NFYVD---KMPSDILLSRPDIQASLYALHSQLYKQTNANAARLPNISLSGSIGEILYSTN 351 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + + + P+ ++ +K N + + E Y T Q V A+ EVENAL + Sbjct: 352 GAGSLVFQIANSITAPLLNRTPLKQNYLIQKELSNEAYYTLQNNVNTALGEVENALFDVQ 411 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 K+ V Q+ E+ K+ + ++G D L+ E ++ L AK Sbjct: 412 SKKRQVQNTQNVYEIGVKAYESNSAKNKRGLLDKNDFLNNENTYLNLQTQLHSAKTNEIL 471 Query: 438 SYVDLYIAIG 447 S + L+ A+G Sbjct: 472 SLITLFKALG 481 >gi|299532157|ref|ZP_07045551.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298719819|gb|EFI60782.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 494 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 98/465 (21%), Positives = 191/465 (41%), Gaps = 42/465 (9%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSLNKLVKIALQ 70 GC + GP + +P L + +S +L D +WW D L++L+ AL Sbjct: 33 GCASQGPAH-QPLARLGSADVGLNDSASLSTADATALASSQWWTGLGDAQLDQLIGQALA 91 Query: 71 QNLTILQATERIN------AAKENILSVRADLFPSSYAS--ISHRFIP-----NLKTNST 117 + ++ + R A VR L + ++ IP N+ + Sbjct: 92 GSPSLAASNARFEKAAALATASSTASDVRGTLSADATRQRYTANGMIPAPIAGNIYNSGN 151 Query: 118 GQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 Q W D FG+ ++++L +A A A + +++ SYI + + Sbjct: 152 LQAGLSWSPDFFGKHGADLQAALGQARAARADSAAAANQLAAQVARSYIALARLIAQKEV 211 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + + LS + G S++ L + +A + ++ I L + + I+ L Sbjct: 212 AERTLSQRQSLLSLSEQRTRAGLDSQVELTQAQAGMPDAQTQIEMLGEQITLARRTIAVL 271 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 N P L + P+ + ADL+ RPD+ ++ + I Sbjct: 272 C--------AQAPDAQNALSPRLSVLRIQPVPQALGADLLGRRPDVVAARWRVEAATQGI 323 Query: 293 GIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++D YP ++L + AL DN G + P L LPIFD ++++ +R ++ Sbjct: 324 ESARADFYPDVNLTAFVGLNALGLDNLLQGSSRQMGITPALRLPIFDGKRLRAQLRGKQA 383 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + VL+A+K+ +A+ S+ ++ ++ +++ ++ Y+ G Sbjct: 384 DLDTAIAQYNGAVLDAVKQAGDAIASVQSLQRQQQLQTESLSKAERAYDFAVQRYQAGLG 443 Query: 410 SLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S + +L+ E ++ VDL R+L + V L A+G G++ Sbjct: 444 SQITVLNTETQLINQRRLAVDLQ--AREL-DTRVALAAALGGGWS 485 >gi|237747443|ref|ZP_04577923.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378794|gb|EEO28885.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 457 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/455 (21%), Positives = 196/455 (43%), Gaps = 32/455 (7%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L + +AGC P L+ Q + + +D +WW+++ + +LN+ V++A Sbjct: 7 ALLCLAIAGCATQTAVI-PDTGLIAPQTIAADYR----VD-YEWWKAYGNPNLNRTVELA 60 Query: 69 LQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFIPNLKTNST-----GQLD 121 L N + ++ +N A + N+L +L P S N K T QL Sbjct: 61 LANNTDLKRSAITVNRALYEANLLG--ENLVPEFSGSGGASTTTNTKAGETVHNYATQLG 118 Query: 122 SDWKIDLFGQRRHIESSLANLDSAY----AQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +++DL+ R + S+ + + Y ++ +L +I+ ++ SY + + I I Sbjct: 119 VSYELDLW---RKLSSAASAQEWEYKATQQDLETVRLALINNVVDSYFHLVYLNQAIRIT 175 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q +D Y + +++ + K+ G L + E + S ++ + LE + + + LL Sbjct: 176 EQNIDFYTRLLQIINNKYLAGKVDALEPLTAEKSLLSSQNSLMNLETNRKTIEQTLRNLL 235 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIP---INIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 + L + F+ L +P +++ +P + RPD++ E ++ + Sbjct: 236 NLKPEDKLDII------FEDILSVPLTNVDLNVPVAALGLRPDVKAAEYRIQSAFLDWES 289 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSAQE 353 K+ +YPS+S+ +++L+ D S +N + G ++ LP KI+ NIR +E+ + Sbjct: 290 VKASVYPSISIGSTLSLSSDKSSTLFNVPFLAGAVQINLPFLQWNKIRWNIRISEADFEN 349 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + V A+ EV+ S + ++ + + K + + Y G L D Sbjct: 350 AKLNLTSAVNTALNEVDTYYYSYRKSLSLLENINRKYDTDAKISLYNQMRYEAGADELKD 409 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 LD + + L AK +Y A+G+ Sbjct: 410 WLDARCTENQTLLSLLEAKYNTINYENAIYKALGA 444 >gi|46143392|ref|ZP_00135327.2| COG1538: Outer membrane protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208316|ref|YP_001053541.1| outer membrane protein [Actinobacillus pleuropneumoniae L20] gi|126097108|gb|ABN73936.1| predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 464 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 100/395 (25%), Positives = 179/395 (45%), Gaps = 47/395 (11%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWKNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRQADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF---- 170 G ++ W++D FG+++ S A+ ++ A ++ LI I +F Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFRIIA 182 Query: 171 --KERISIAHQI--LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 K+ ++ Q+ L +K+ I+ +F G + L +++ +I +I++ TL Sbjct: 183 TDKQNNNLTQQLTALQAFKRYIQG---RFNAGQATAYELNEIDGQISAIQAKQSTLSAQA 239 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 240 DEFQRNIAILIGKTPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQ 296 Query: 287 DSVAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDK 337 A + ++DLYP + G + L D +S G S G + LPIF Sbjct: 297 AQAANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTN 351 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G+I +NI A++S + I + +T+L A+ EV++A Sbjct: 352 GRIAANIEAAQASLKAALIQYDKTLLTALAEVDSA 386 >gi|315498479|ref|YP_004087283.1| rnd efflux system, outer membrane lipoprotein, nodt family [Asticcacaulis excentricus CB 48] gi|315416491|gb|ADU13132.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] Length = 451 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/413 (21%), Positives = 183/413 (44%), Gaps = 33/413 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + + ++L GC P T+P P+ +P IG +WW+ + D L Sbjct: 12 LMGVSALVLTGCAALPN-TEPVSPVPSASPVPQDMLIG-----------RWWDGYKDAQL 59 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----PNLKTNST 117 LV+ AL+ + + A R+ A+ + +A L+P++ A + + P + + Sbjct: 60 TDLVQTALRDSPNLTAAAGRLLKARALEDTQKATLYPTATALGASLQMGGKDPAIDAVTL 119 Query: 118 GQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G ++ W++D +G+ R +++++ ++A A A L + + L+ ++ + H + + + Sbjct: 120 GGINFGWELDFWGKNRAGLKATVTAAEAARADGQQAVLVLSTSLVNAWFELGHMYKDLDV 179 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + L + L + G + L + A + + + ++ L + + H I+ L Sbjct: 180 AERNLAIRTDTQSLVAQRVEGGLRPRAELEQARANVANSKGEVAALNERILIQRHLIAAL 239 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G A F + + + P I + +L+ RPD+ + +V AK Sbjct: 240 AGQ-APAFGEALPRPVLPDTQDFKAPTRIDL--ELVARRPDVAAARARAEQAVHGTERAK 296 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + YP+++L N G + GP + LP+F+ G++++N+R AE+ Sbjct: 297 ASFYPNVNLMAFAGKVFLNDLSGSGIDAINAGPVISLPLFEGGRLRANLRGAEADQSVAL 356 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 ++ ++V+NA++EV + S T L + L ++++ S YR R Sbjct: 357 ASYHQSVINAMQEVADTGAS-------QTALSERLSLSNEALASSEEAYRMAR 402 >gi|330988196|gb|EGH86299.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. lachrymans str. M301315] Length = 490 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 95/398 (23%), Positives = 172/398 (43%), Gaps = 45/398 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINI---DTLKWWESFNDTSLN 62 L ++ +GC++ PEY +P +P+ Q S G++ I + + E L Sbjct: 22 LLSLIFSGCSLIPEYQRPALPVPADQLSAVVPAGDASIAIALTADEEALAAELSPKGELR 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIP 110 L++ AL N A R++ A+ RAD FP+ A + R+ Sbjct: 82 VLLQSALTFNRDFRVAVLRVDEARAMRGITRADRFPTIGAGVQRNRQHFDNAAADERYGQ 141 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDAR 168 +L S G SD+++D FG+ R + + + L S Y Q A+ +++++ +++ R Sbjct: 142 DLSIASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALVAEVARAWLAER 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDIPT 221 A + D ++ + + QGA S +L + + +++ SD Sbjct: 199 LAAAVQQDAQTVHDARLMLVKAAEEQQRQGAISLDDLMAQRLDTLTAQQQVQDALSDHAN 258 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIR 279 ++ + L GY A L + L P +P+ + R DIR Sbjct: 259 ASQALLL-------LTGYSAV--LPATTPDTPALTAALVEPPAWLSNLPSQRLLERFDIR 309 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFD 336 +E+ L S A IG A++ +PS+ L+ S+ L D+ F + W F P+L LP+FD Sbjct: 310 QREEALKASNANIGAARAAFFPSIKLSTSVGLQSDSLRTLFSNGSGTWLFSPQLNLPLFD 369 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 G+ ++N+ A Q +++ + NA +E+ LT Sbjct: 370 GGRNQANLDLAHVRQQIAVAEYEKAIQNAFREMAGVLT 407 >gi|307297097|ref|ZP_07576912.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306877485|gb|EFN08714.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 452 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 105/465 (22%), Positives = 196/465 (42%), Gaps = 33/465 (7%) Query: 5 RAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 RA+ +L + L+ C + P Y +P P+ G S + + L W D L Sbjct: 3 RALVTLACLAALSACDMAPHYVRPAPPV--PAALPGVSVDAAEMPGLPWTALIGDQRLKT 60 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQ 119 +++ AL N + A + AA+ RA P+ + A S R S Sbjct: 61 VIERALAYNRDLRAALANVEAARAQYRVQRAAQLPAVTGEAGADFSRRNDSRQDNYSADI 120 Query: 120 LDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 S +++DLFG+ R +ES L + A A S +Y +E + Sbjct: 121 GFSAFEVDLFGRMKNLTRAALESYLETEEGARAARIALIAETAS----AYATLAADQELL 176 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +++ Q L ++ + L G T KL + + E ++ SDI + + + Sbjct: 177 ALSRQTLASAERTLALIRSLNGAGLTGKLDVHQAETTVEQARSDIAANVTQVAQDRNALD 236 Query: 235 TLLGYPATEFL--HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 L+G P + L ++ + N G+ +D++ RPD+ E +L + A I Sbjct: 237 LLVGAPVEDGLLPQSLEALAGNIAKT-----PAGLSSDVLLQRPDVLQAEHRLKAANADI 291 Query: 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 G A++ ++P +SL +I + + F G WS GP +PIF G + ++ +++ Sbjct: 292 GAARAAMFPKISLTAAIGVASSALSSLFTGGGFAWSAGPSASMPIFGGGA-RGDLDFSKA 350 Query: 350 SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + A +EV +AL +I+E + +L V ++S +L+ YR Sbjct: 351 QRDVSLAQYEKAIQTAFQEVADALAREGTIDEQRAAQQRL---VVASQRSYALADERYRA 407 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G + L+ L +R + + L ++ + LY IG+ ++ Sbjct: 408 GIDTFLNSLISQRGLYGAQRSAIATELALIRNRILLYRVIGADFS 452 >gi|218702746|ref|YP_002410375.1| putative outer membrane efflux protein MdtP [Escherichia coli IAI39] gi|218372732|emb|CAR20608.1| outer membrane factor of efflux pump [Escherichia coli IAI39] Length = 488 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 93/477 (19%), Positives = 203/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q ++ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRNVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|320323654|gb|EFW79738.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. glycinea str. B076] Length = 490 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 31/391 (7%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINI---DTLKWWESFNDTSLN 62 L ++ +GC++ PEY +P +P+ Q S G++ I + + E L Sbjct: 22 LLSLVFSGCSLIPEYQRPALPVPANQLSAVVPAGDASIAIALTADEEALAAELSPKGELR 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRFIP 110 L++ AL N A R++ A+ RAD FP+ A + R+ Sbjct: 82 VLLQSALTFNRDFRVALLRVDEARAMRGITRADRFPTIAAGVQRNRQHFDNAAADQRYGQ 141 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ S G SD+++D FG+ R + + + L S Y Q A+ +++++ +++ R Sbjct: 142 DISIASVG--ISDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALVAEVARAWLAER 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 A + D ++ + + QGA S L+ E + + + Sbjct: 199 LAAAVQQDAQTVNDARLMLVKAAEEQQRQGAISLDDLMAQRLETLTAQQQVQDALSDHAN 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLA 286 + L GY A L ++ L P +P+ + R DIR +E+ L Sbjct: 259 ASQALLLLTGYSAV--LPATTPETPALTAALVEPPAWLSNLPSQRLLERFDIRQREEALK 316 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S A IG A++ +PS+ L+ S+ L D+ F + W F P+L LP+FD G+ ++N Sbjct: 317 ASNANIGAARAAFFPSIKLSTSVGLQSDSLRTLFSNGSGTWLFSPQLNLPLFDGGRNQAN 376 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALT 374 + A Q +++ + NA +E+ LT Sbjct: 377 LDLAHVRQQIAVAEYEKAIQNAFREMAGVLT 407 >gi|167576570|ref|ZP_02369444.1| outer membrane efflux protein [Burkholderia thailandensis TXDOH] Length = 471 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 111/455 (24%), Positives = 208/455 (45%), Gaps = 32/455 (7%) Query: 20 VGPEYTKPHMPLLPTQ-----FSIGNS-KNLINIDTL--KWWESFNDTSLNKLVKIALQQ 71 VGP+Y P L+ T F G S + + + L +WW F+D +L+ LV+ AL Sbjct: 23 VGPDYRIPPGALVNTPAANRPFVAGASGAKVASGEPLPDRWWRLFDDPALDGLVEKALSG 82 Query: 72 NLTILQATERINAAKENIL----------SVRADLFP-----SSYASISHRFIPNLKTNS 116 N+ + A N A+ + L S+ AD S+ + +SH P + + Sbjct: 83 NVDLRVAE--ANLARSDALLAAARTAREPSIAADASTTYTQQSAQSVLSHVEPPRHEIYN 140 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G + + +DLFG RR IE++ A+ ++A A D+A++NV +++ +Y D + ++ Sbjct: 141 IG-FTASYDLDLFGGIRRGIEAASADREAAAAARDLARVNVAAEVTRAYSDLCNAGNQLD 199 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA + + + ++ + L+ L G + E S + + LE ++ Sbjct: 200 IARRSISVQERRLALTRLLVAHGRAPSFEQRRDEGAADSSRAQLAPLEARRLNAAFRLAA 259 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L G P + + +L PI G L++ RPD+R E++LA + A+IG+ Sbjct: 260 LTGQPPENYDRALLACRTPL--SLAAPIPTGDGRALLKRRPDVRAAERRLAAATARIGVE 317 Query: 296 KSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + LYP + L SI T + F ++ GP + + + I++ I A + ++ Sbjct: 318 TAALYPDIKLGASIGSTGGAASFFTPLTNRFAIGPMVTWDLH-RNAIRARIEAARADSRA 376 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 + TVL A++E E AL + + + +L+ + + + M + R G+ L Sbjct: 377 SLAHFDATVLAALRETETALETYAGALERLRRLEASRDAARAVMERTDELRRGGKVGGLV 436 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 LD ER + ++ A+R++ + ++A+G Sbjct: 437 ALDAERGWLAAQAAVAAAQREVNDDQIATFLALGG 471 >gi|121597435|ref|YP_990115.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|166999495|ref|ZP_02265332.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] gi|254174345|ref|ZP_04881007.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|121225233|gb|ABM48764.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|160695391|gb|EDP85361.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|243064339|gb|EES46525.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] Length = 619 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|71737242|ref|YP_273369.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557795|gb|AAZ37006.1| outer membrane efflux lipoprotein, NodT family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 493 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 99/477 (20%), Positives = 202/477 (42%), Gaps = 37/477 (7%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSLLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIAL--QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 ++ D LN V IA L + A R A E I + AS+ P Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARAMEQIAESSESVQVQGSASLMRHDWPE 123 Query: 112 LKTNSTGQLDS------------DWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNV 156 + G L + +DL+G+ R+ +S LD A+ A+ A+L + Sbjct: 124 DQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHVSAAEQRQAQLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 182 QENVVRAYIQLSLEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPEAH 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ RP Sbjct: 242 RQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKMPS--ALPAELLGRRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLY 331 D+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 299 DVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAIS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G++++ + +A ++ + + +T++ A+K + + L K +V Sbjct: 359 LPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAESVA 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 419 SAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|70731277|ref|YP_261018.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] gi|68345576|gb|AAY93182.1| outer membrane efflux protein [Pseudomonas fluorescens Pf-5] Length = 489 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 97/443 (21%), Positives = 191/443 (43%), Gaps = 36/443 (8%) Query: 4 LRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESF 56 LR+ +L + ++LAGC L G S N + + WW S Sbjct: 6 LRSSLTLVLSAMILAGCANYSGLDTQGKNLDAKSLKAGQSLNGVTLSPAAWPKSDWWTSL 65 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKT 114 D L+ L++ AL+ + + A R + A + A+ +P+ + A IS + Sbjct: 66 GDPQLDGLIREALRDSPDMQIAAARAHQASAAAYAADAERYPTLDASAGISRSRLAK-DQ 124 Query: 115 NSTGQLDS-----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + GQ D+ ++ DL+G QR E++L +A A+L + + + Sbjct: 125 DPLGQGDAYATVRNISAGFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLAADVAR 184 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y D +A L ++ ++LS + + G S+ L + ++ S E+ + Sbjct: 185 AYSDLGQAHIVYDLASDDLKRTRQMLDLSQRRLSAGIDSQYQLQQTQSLEASSEASLIDA 244 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDI 278 EK ++ LLG + S +P + + +P A+L+ RPD+ Sbjct: 245 EKRLSSAKIALAVLLG-------KGPDRGSEIARPKVLQASAVAVPSVLPAELLGRRPDL 297 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ + I AK+ YP+L+L G+ +L D F + +S P + LPIF Sbjct: 298 VAARWRVEAASKDIDSAKTRFYPNLNLTASAGAESLLGDAMFGSASRFFSIAPTISLPIF 357 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G++++N+ ++ + ++++ A+ +V + + + + + + QHA ++ + Sbjct: 358 DGGRLRANLDSRDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATDIAQD 417 Query: 396 SMSLSMINYRQGRYSLLDILDIE 418 S + + Y G + LD+L IE Sbjct: 418 SYNTVVQRYGSGIGNYLDVLSIE 440 >gi|330817114|ref|YP_004360819.1| hypothetical protein bgla_1g22360 [Burkholderia gladioli BSR3] gi|327369507|gb|AEA60863.1| hypothetical protein bgla_1g22360 [Burkholderia gladioli BSR3] Length = 509 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 79/350 (22%), Positives = 160/350 (45%), Gaps = 24/350 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS---SYASISHR 107 WW+ + L+ LV L+ + + A + AA+E + + + + L PS S + R Sbjct: 80 WWKQYRSDRLDALVDEGLRASPNLAAAEHSLQAAREQLRAQIGSSLLPSVDLSGQTARER 139 Query: 108 F--IPNLKTNST------GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVIS 158 +P+ + GQL +++ IDLFG R L +D Q++ + + + Sbjct: 140 GLGVPSFGPPTALYNLFVGQLQANYTIDLFGAARFANRELRQRVDVTAFQLESTRRALAA 199 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ + I + E++ +++ L ++ + ++ G+ S+ E S+E+ Sbjct: 200 NIVTAAITSAALGEQLRTTERLVALAREQAADTASRYRLGSASRSDSYGAEQSAASLEAS 259 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRP 276 +P L + + H ++ L+G Q + L++P + + +P+ L+ RP Sbjct: 260 LPALRQQWLSARHALAVLIGRTPD------QAPDDLALAELHLPEHVPVVVPSSLLETRP 313 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLP 333 DIR + L S A +G A + L+P +SL+ S+ + G WS G L P Sbjct: 314 DIRAADAALKASAAAVGAATAQLFPQISLSASLGQAGFKWPLALSGAGGIWSVGASLTQP 373 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 +F G + + R A++S ++ TVL+A + V ++L +++ D + + Sbjct: 374 LFHGGALLAQRRAAQASYAAAVEQYKATVLSAFQNVADSLAALDNDAQAL 423 >gi|254293008|ref|YP_003059031.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] gi|254041539|gb|ACT58334.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] Length = 461 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 182/411 (44%), Gaps = 17/411 (4%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 + W E ND +L LV A+ N + A + + A L P S Sbjct: 58 MGWLEKLNDPTLTALVDEAIANNKNLEAAAAGVERSWALAGQAGAGLSPMVNIGASGGGG 117 Query: 110 PNLKTNSTGQLDSD----WKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPS 163 L S L ++ W++DL+G R + A L + Q D ++ ++ + + + Sbjct: 118 GALDGASVAALGTELTAAWEVDLWG-RIQAGVNAATLGAQATQADYTYSQYSLAAAVAQA 176 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + + L + + +++ G S L ++++ S ++ + + Sbjct: 177 YFLTIEAGLQADVTAKSLKALTETTRIVDVQYEAGLASSQDLALAKSDLASTQASLIAAQ 236 Query: 224 KSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + R + + +LG YPA + L ++ P++ G P+DL+ RPDI E Sbjct: 237 GAQRSAMRALEVVLGRYPAAD-LDIIKGL-----PSVPELPPAGTPSDLLERRPDIIAAE 290 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHD--NSFPGYNTHWSFGPKLYLPIFDKGK 339 + +A S + +AK PS+SL GS+ + D + N W + P+ D G+ Sbjct: 291 RNVAASFESLHMAKVANLPSISLIGSVDGASSDLADILNPANVAWQAVTSIAAPLIDGGR 350 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ I +A + ++ + +T L+A EVE AL K+ V L+ + + ++++ + Sbjct: 351 NEAEILQASAEQKQAIAVYGQTALDAFSEVEEALDQNVVLKQRVAALRESADKAEEALRI 410 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + Y +G SL+D+L I++ + + +L ++ +V L +A+G + Sbjct: 411 ANLRYNEGETSLIDVLTIQQRVFQADANLVNVQQLRLSQWVKLNLALGGSW 461 >gi|126456076|ref|YP_001075031.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|167848981|ref|ZP_02474489.1| outer membrane efflux protein [Burkholderia pseudomallei B7210] gi|242312166|ref|ZP_04811183.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|126229844|gb|ABN93257.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|242135405|gb|EES21808.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 619 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 203/475 (42%), Gaps = 37/475 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKTNSTGQLDS-----------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVIS 158 L+ + GQ + ++IDLFG+ R + + L + A+ + +++++ Sbjct: 131 LR--APGQSTAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVA 187 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 188 EVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVA 247 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 248 AEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDI 304 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIF 335 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF Sbjct: 305 MAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIF 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G ++N+ A ++ T+ +A +EV + L + ++ V + + + Sbjct: 364 NAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 424 TKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|182415610|ref|YP_001820676.1| outer membrane efflux protein [Opitutus terrae PB90-1] gi|177842824|gb|ACB77076.1| outer membrane efflux protein [Opitutus terrae PB90-1] Length = 449 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/412 (21%), Positives = 178/412 (43%), Gaps = 42/412 (10%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L + AL+ N I QA ERI + ++ V+A P+ A +++F +NS Q Sbjct: 42 LQTAIGYALEHNFAIRQARERIREQEGVVVEVKAQALPNVGAGGNYQFGEREISNSQPQS 101 Query: 121 DSDWKIDLF---------GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 + W ++L G R I+SS ++A + + ++ +Y + Sbjct: 102 NHGWSLNLTASQTLFAGGGVRASIQSSELVREAALLDLKAVINAALLQVRTNYYQVLLAR 161 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ERI++ + L L ++ ++ + +F G S ++ E + + ++ + + +R+ + Sbjct: 162 ERITVQEENLRLLEQQLKTTTDRFEAGTVSGFERLRAEVAVANAKTPLISARNDYRLAIE 221 Query: 232 NISTLLGYPA--TEFLHYMQKQSN--NFQPNLYIPINIGIPADLIR-NRPDIRYQEKKLA 286 + LG TE L + +F+P + ++ + R NRPD++ K +A Sbjct: 222 ALRQSLGLTTRRTESLDSAAEIVGKLDFEP---VSFDLRSATESARANRPDLQRLSKLVA 278 Query: 287 DSVAKIGIAKSDLYPSLSLNG----------SIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 S I A+S YP ++ G +++ + +F G + W IFD Sbjct: 279 ASERAITTARSGYYPRVAAVGGWEAFKGRTLAVSDGREGAFIGVQSQWD--------IFD 330 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + +A S ++ +T E L A EV A +S E ++V VE +++ Sbjct: 331 GRATSGRVAQARSVVEQNRLTLVERELAAEVEVRRAYSSWQEATELVEASGRVVEQAEEA 390 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L+ Y G + LD+L + +V+L+ A+ ++Y + +AI + Sbjct: 391 VRLANARYSAGTGTQLDVL-------QAQVELTTARTNQVQAYYNYNVAIAT 435 >gi|157375114|ref|YP_001473714.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Shewanella sediminis HAW-EB3] gi|157317488|gb|ABV36586.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Shewanella sediminis HAW-EB3] Length = 465 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 103/399 (25%), Positives = 189/399 (47%), Gaps = 22/399 (5%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L +LV AL QN + Q + A + + P A ++ + + + + Sbjct: 76 LTQLVSHALSQNPGLQQTAIAVKIAYQQQGLTNSARLPQVSAGLTSENSEDNEISYKSDV 135 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAH 178 W++DL+ Q+ E S A +D A + V+ AK + + ++ S++ ++ I I Sbjct: 136 TVSWELDLW-QKLSDEVSAAEMDLAASSVNYQAAKDLLAANVMRSWLKINLQQQIIQIEE 194 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV----HNIS 234 Q L+ + N EL L+ + L L+ + E+ TLE SFR ++ ++ Sbjct: 195 QRLESQEAN-ELFILERYRSGLGDLE--GLDTARTNSETTRSTLE-SFREDLTRERRTLA 250 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LGY A L + S ++ P + P+ +P + RPD++ + + I Sbjct: 251 LQLGYNANNKLIPI---SASY-PEVIQPL-ASLPEQDLGRRPDLQAAYFTILAQQYRTDI 305 Query: 295 AKSDLYPSLSLNGSIALTHDNS----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A L PS+SL GS+ N F G + W + P+F GK++ +I A+ + Sbjct: 306 AYKSLLPSISLTGSLTEIASNPSDALFGG--SAWKLLSSITAPLFQGGKLRVDIEIAKLT 363 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ Y +QET+L A+ EV+NAL++ N K+ L++A + K+S + + YRQG + Sbjct: 364 TEKDYWAYQETLLTAVNEVDNALSNENSIKRQQQHLENAFDSAKRSSANYQVKYRQGLVN 423 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD+L +++ ++ L A+ + +DL +A+G G Sbjct: 424 ILDLLSVQQQAFDIQTQLVTAQYNRLANRIDLGLALGLG 462 >gi|330963232|gb|EGH63492.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 486 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 101/477 (21%), Positives = 209/477 (43%), Gaps = 40/477 (8%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFND 58 LR + L + L+ V K +LP T +I ++ + +WW ++ D Sbjct: 9 LRPLGILALTLVISACVATHGIKQQGSVLPVDRLATDQAIQSAARDAHWPAAQWWRAYGD 68 Query: 59 TSLNKLVKIAL--QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 L++ +++A +L + A R A I L S AS+ P+ + Sbjct: 69 AQLDRWIELATLGSPSLALAAARVRQARAMAGIAESSESLQVQSSASLMRHAWPDDQFYG 128 Query: 117 TGQLDS------------DWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNVISKLI 161 G L + +DL+G+ R+ S LD A+ A+ A+L + ++ Sbjct: 129 PGALADTRTWDNNASLGLSYALDLWGRERN--KSEQALDLAHVSAAEQRQAQLELQENVV 186 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +YI R+ IA L ++ ++L+ + T G + + + + I Sbjct: 187 RAYIQLSLNYARLDIAEAALTQQQQILDLAQRRLTGGIGTHFEISQARTSLPEAHRQIDA 246 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L+++ ++ + ++ L G + + +Q+ + L +P +PA+L+ RPD+ Sbjct: 247 LQEAIALSRNQLAALAGKGPGQGVE-LQRPVLSLHTELKLPS--ALPAELLGQRPDVVAA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTHWSF----GPKLYLPIFD 336 ++A I +A ++ YP++ L GS+ + S G+ + F GP + LPIFD Sbjct: 304 RWQVAARERGIDVAHANFYPNVDLLGSLGYMATGGSMLGFLSGSKFSYTVGPAISLPIFD 363 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-TSINEDKKIVTKLQHAVELHKK 395 G+++ + A +S + +T++ A+K + + L + DK+ V + +V +K Sbjct: 364 GGRLRGELGEASASYDMAVAHYNQTLVMALKSISDQLIRRASMDKQRVFAAE-SVASAQK 422 Query: 396 SMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + +++I +++G L++L+ K++ + A+ +Y L +A+G G Sbjct: 423 TYYIALIAWQRGLTDYLNVLNARTLLFRQQKIQQQVEAAR---LTAYAGLTVALGGG 476 >gi|260870839|ref|YP_003237241.1| putative outer membrane factor of efflux pump [Escherichia coli O111:H- str. 11128] gi|257767195|dbj|BAI38690.1| predicted outer membrane factor of efflux pump [Escherichia coli O111:H- str. 11128] gi|323175974|gb|EFZ61566.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli 1180] Length = 488 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 94/477 (19%), Positives = 204/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + IPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTSIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|228471678|ref|ZP_04056451.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga gingivalis ATCC 33624] gi|228276831|gb|EEK15526.1| RND efflux system, outer membrane lipoprotein, NodT family [Capnocytophaga gingivalis ATCC 33624] Length = 465 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 103/482 (21%), Positives = 213/482 (44%), Gaps = 56/482 (11%) Query: 3 ILRAIFSLFIVL-LAGCTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFND 58 I + F+ L L C Y +P++ L T +S + N+ W F D Sbjct: 5 IYKGFAVAFVALTLTACAGRKTYERPNVVNEKLFRTDNIPTDSLSSANVS---WRNIFTD 61 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPN 111 +L + AL NL + A + + +A+ + +A P+ + A+ S + Sbjct: 62 ATLQGHINKALSNNLDVRVAMQNVASAQAYLKQSKAAFIPTLAAQANYTRATSSINAMGG 121 Query: 112 LKTNSTGQL-----DSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + + G L + W+ D++G+ R S LA +++ A + V++ L Sbjct: 122 VGERTYGNLWDLTGSASWEADIWGKLSAQKRASYASYLATVEAQKA----VQSEVVATLA 177 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELS-HLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y ++ + Q +D +K++E + HLK G+T++++ ++EA + + ++ + Sbjct: 178 TAYYQLLMLDKQKKVLEQTIDFRQKSLETTKHLK-EAGSTTEVATKQIEALVYNAQAQLI 236 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +++ S + I LLG E H +++ + Q N G A L++NRPD+ Sbjct: 237 SIKNSVWALENTICVLLG----EEPHTIERTTLAEQ-NFPTEFKQGYAAKLLQNRPDVAR 291 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGPKLYLPIFDK 337 E L ++ +A++ YP+L+L+ G + T D + +F L PI + Sbjct: 292 AELSLRNAFEMTNVARAAFYPTLTLSARGGFSSTELDTWISAKSIFANFVAGLAQPILNG 351 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT-------KLQHAV 390 +I++ + + + +++ +L+A KEV +A+ + + + + Q A Sbjct: 352 RQIRTQYEMRQIEQETALLNFKKVILSAGKEVADAMQNFSNQTEFIELKNKEMKAYQEAT 411 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY--VDLYIAIGS 448 + K+ M+NY L+++ E ++ +LS+A+ Q + + LY A+G Sbjct: 412 DYSKQLFDSGMVNY-------LEVITAE--VNRLNAELSVAESQFTRMQYGISLYKALGG 462 Query: 449 GY 450 G+ Sbjct: 463 GW 464 >gi|254239605|ref|ZP_04932927.1| hypothetical protein PA2G_00222 [Pseudomonas aeruginosa 2192] gi|126192983|gb|EAZ57046.1| hypothetical protein PA2G_00222 [Pseudomonas aeruginosa 2192] Length = 482 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 100/431 (23%), Positives = 193/431 (44%), Gaps = 43/431 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 110 ------------PNLKTN--STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 +L++ T +LD +++DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEDLRSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLS--------------LNGSIALTHDNSFPGY 320 RPD+R E++LA + A+ +AK++LYP +S L GS AL + Sbjct: 291 RPDVRAAERRLAAADARRALAKAELYPRISFAVGAETSAVTLAGLGGSGALAY------- 343 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + GP L ++ + + A + + VL A++EVE AL ++ Sbjct: 344 ----AAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGER 399 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + LQ A++ + + L+ NYR G L++LD +R+ L A+ ++A+ V Sbjct: 400 QRRADLQRALDEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQV 459 Query: 441 DLYIAIGSGYN 451 +L+ A+G G+ Sbjct: 460 ELFRALGGGWQ 470 >gi|327405832|ref|YP_004346670.1| NodT family RND efflux system outer membrane lipoprotein [Fluviicola taffensis DSM 16823] gi|327321340|gb|AEA45832.1| RND efflux system, outer membrane lipoprotein, NodT family [Fluviicola taffensis DSM 16823] Length = 488 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 110/483 (22%), Positives = 216/483 (44%), Gaps = 55/483 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--------WWESFNDTSLNK 63 +V L C V + K + + P +F L+ ID++K W F D L + Sbjct: 16 LVFLTSCKVHQDALKTDISI-PQKFEA--EAPLLAIDSVKKITETPEKWQTFFKDPILVQ 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF-------IPNLK 113 L+ AL NL + A +++ A+ + + P ++ RF + N Sbjct: 73 LIDSALVNNLDMQIAFQKVQQARAGVQYTKGIRLPDLGVNLGAGVRRFGDYTIDGVGNYD 132 Query: 114 TNSTGQLD-----------------SDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLN 155 T + L+ S W+ID++G+ + + + + A Q ++ N Sbjct: 133 TKFSTNLNNKQQLPNPIPDFYVGVYSTWEIDIWGKLKAKKKAAFSRFLAEEQGRNLVITN 192 Query: 156 VISKLIPSYIDARHF-KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +IS++ Y + ++R IA IL L + +++ + G +++L++ + A++ + Sbjct: 193 LISEIAIHYYNLMLLDRKRAIIAENIL-LQENALQVVGFQRDIGKSNQLAIELISAQVLA 251 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 ++ + +++ + ++ LLG YP F + N P L GIP+DL+ Sbjct: 252 AKTLLMEVDQEIIEEENTLNFLLGRYPQPVF-----RSEFNVMPELTKNELPGIPSDLLG 306 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG----PK 329 NRPDI +L A + AK+ YP+L+LN ++ + + + S Sbjct: 307 NRPDILTAAYRLKAQNADVKAAKAAFYPNLTLNANLGYQAFRAAFLFESPASIAYNVVGG 366 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--EDKKIVTKLQ 387 L P+ ++ +K+++ +++S QE Y+ +++T+L A EV + N E + +V Q Sbjct: 367 LVTPLLNRRALKADLMASKASQQEAYLNYEKTILQAFTEVYQLVKLDNNFESRSVVKNEQ 426 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 V L K+S+ S + GR L+I+ + + +++L R ++ V LY A+G Sbjct: 427 --VALLKQSVETSRTLFSSGRAGYLEIITSQENYLRSQIELLEIYRLKNQNNVHLYKALG 484 Query: 448 SGY 450 G+ Sbjct: 485 GGW 487 >gi|270265369|ref|ZP_06193630.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] gi|270040773|gb|EFA13876.1| RND efflux system outer membrane lipoprotein [Serratia odorifera 4Rx13] Length = 483 Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 99/396 (25%), Positives = 181/396 (45%), Gaps = 46/396 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIAL 69 ++LLAGC + P L+ +Q + K + +N+ +WW + ND L+ L+ L Sbjct: 15 VLLLAGC-ASTDNIAPQSTLMDSQSLQLSQPKVSSLNVSP-QWWRALNDPQLDALMTRTL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIP---NL-----------K 113 Q + T+ QA R+ A+ + A P+ AS + + +P N+ Sbjct: 73 QSSPTLRQAAARVREAQSVMGQANAANGPNLDLNASTNRQKVPQNVNMGLGYPHKPIYES 132 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +NS G L+ ++ D +G+ R + ++ A +D+A A+ + A L + S + SY + Sbjct: 133 SNSLG-LNLAYEFDWWGKYRNQVNAAKAQVDAARAEQEQAALTLTSSVASSYYLLQSNFA 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Q +D + EL ++ G T + +A+ S + I L+ H Sbjct: 192 QEKLLQQEVDNNQSLTELRQRQYKAGITGIDIPQQTQAQADSAKQQILQLQSQIEQLKHQ 251 Query: 233 ISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINI------GIPADLIRNRPDIRYQEKKL 285 ++ L G P+T MQ N P + +P N + ADL+ RPDI Q + + Sbjct: 252 LAALAGQGPST-----MQ----NLHP-VALPANTLMAPKGELTADLLGKRPDIAAQRQLV 301 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-------FPGYNTHWSFGPKLYLPIFDKG 338 ++ A+ + YPSL+++ LT N+ F + W+ P + LPIF G Sbjct: 302 ESYNQRVSAARKEFYPSLTISAFAGLTTTNTPGTSPNLFEAASQAWNVMPAISLPIFHAG 361 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 ++S + + E ++ +T+LNA++E +A+T Sbjct: 362 ALRSKLGEESALYDEAVESYNQTILNAVQETADAIT 397 >gi|312795949|ref|YP_004028871.1| fusaric acid resistance protein fusA [Burkholderia rhizoxinica HKI 454] gi|312167724|emb|CBW74727.1| Fusaric acid resistance protein fusA [Burkholderia rhizoxinica HKI 454] Length = 501 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 200/438 (45%), Gaps = 36/438 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----TLKWWESFNDTSL 61 AIF+ ++++ AGC P+ Q + +ID + +WW+ + D L Sbjct: 13 AIFAGYLII-AGCASTQGIAPRAKPVDAGQLDASQAVRAASIDAQWPSEQWWKMYRDPQL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIP--------- 110 ++ + AL + ++ A +R+ A+ RADL + S++ + P Sbjct: 72 DQWITDALAGSPSLAMARDRVRQARAMAGVARADLASQLNGNLSMTRQHWPDNVYYGPGP 131 Query: 111 --NLKT-NSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQ-VDI--AKLNVISKLIPS 163 N T N+T L + +DL+G H E + LD+A Q VD A+L + ++ + Sbjct: 132 LANADTWNNTIGLSLSYNLDLWG---HDEKAAERALDAACMQAVDARAAQLELEVNIVRA 188 Query: 164 YID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 YI + F +R IA Q L + ++++ + G ++L L + +A + E I Sbjct: 189 YIKLSLAFAQR-DIAAQTLAHEQSIVDIARRRLQGGIGTQLELTQAQAPLPRRERQIAAF 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ + + N L +Q+ + + Q + +P N+ PA+L+ +RPD+ Sbjct: 248 DEQIAL-LRNQLAALAGKGPGAGAALQRPTLSLQTPVSLPSNL--PAELLGHRPDVVAAR 304 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-----GYNTHWSFGPKLYLPIFDK 337 ++A + A I +A++ YP+++L S+ P + GP + LPIF+ Sbjct: 305 WRVAANAAGIDVARTAFYPNVNLLASVGGMFVGGGPLAFLLSQAHAATVGPAVSLPIFNG 364 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G++++ + A + + +T+++A+K++ + + ++ Q AV + ++S Sbjct: 365 GRLRAQLDAASAGYDLAVDQYNQTLVDALKDIADQIVTLKSLDVQQDAAQRAVAVAQRSY 424 Query: 398 SLSMINYRQGRYSLLDIL 415 L+ +R+G L +L Sbjct: 425 DLASTGFRRGLTDYLSVL 442 >gi|298485773|ref|ZP_07003852.1| Outer membrane component of tripartite multidrug resistance system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159799|gb|EFI00841.1| Outer membrane component of tripartite multidrug resistance system [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 493 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 95/479 (19%), Positives = 204/479 (42%), Gaps = 41/479 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSFLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN+ V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNRWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKL 154 P ++ L + +DL+G+ R+ +S LD A+ A+ A+L Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHVSAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIQLSLEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPALSLHTELKLPS--ALPAELLGQ 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G++++ + +A ++ + + +T++ A+K + + L K + Sbjct: 357 ISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAES 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 417 VASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|218892785|ref|YP_002441654.1| putative outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa LESB58] gi|218773013|emb|CAW28825.1| probable outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa LESB58] Length = 482 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 98/431 (22%), Positives = 191/431 (44%), Gaps = 43/431 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 111 NLKTNS---------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + + T +LD +++DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEDLHSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLS--------------LNGSIALTHDNSFPGY 320 RPD+R E++LA + A+ +A+++LYP +S L GS AL + Sbjct: 291 RPDVRAAERRLAAADARRALAEAELYPRISFAVGAETSAVTLAGLGGSGALAY------- 343 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + GP L ++ + + A + + VL A++EVE AL ++ Sbjct: 344 ----AAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGER 399 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + LQ A++ + + L+ NYR G L++LD +R+ L A+ ++A+ V Sbjct: 400 QRRADLQRALDEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQV 459 Query: 441 DLYIAIGSGYN 451 +L+ A+G G+ Sbjct: 460 ELFRALGGGWQ 470 >gi|152983649|ref|YP_001351214.1| outer membrane protein [Pseudomonas aeruginosa PA7] gi|150958807|gb|ABR80832.1| probable outer membrane protein [Pseudomonas aeruginosa PA7] Length = 490 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 104/431 (24%), Positives = 191/431 (44%), Gaps = 47/431 (10%) Query: 52 WWESFNDTSLNKLVKIALQQ--NLTILQATERINA---------------AKENILSVRA 94 WW D L++L+ ALQ +L I +A R A AK + RA Sbjct: 64 WWTGLGDRQLDQLIAEALQGTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGARA 123 Query: 95 DLFPSSYAS--ISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 P+S A + R+ +K S G ++ DL+G +R E++L ++A Sbjct: 124 ---PTSVAPAPLGGRY-SAIKYLSLG---FNYDFDLWGGERAAWEAALGRANAAQVDSQA 176 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++ + + + +Y D H +A + L ++ ELS + + G SK+ L + + + Sbjct: 177 ARIGLSASIARAYSDLDHAFTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQ 236 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + E+ ++ LLG L + Q N +L +P +PA+L Sbjct: 237 LATARQQLSAAEQDIASARIALAMLLGKGPDRGLELQRPQPLN-PASLSLPAV--LPAEL 293 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + R DI ++ + I AK++ YP+L+L G AL + + + P Sbjct: 294 LGRRADIVAARWRVEAASRDIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAP 353 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIFD G+ ++N+ ++ + +T++ A+ EV + L + + V + Sbjct: 354 AISLPIFDGGRRRANLAGRDADYDLAVGQYNKTLVQALGEVSDDLGKLRSLGQQVVDQRQ 413 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI- 444 A ++ + + L+M Y +G S LD L +++ L +A+RQLA +DL + Sbjct: 414 ARDIARSNFDLAMRRYGEGVGSYLDALSVQQ-------QLLVAERQLASLQSQQIDLSVQ 466 Query: 445 ---AIGSGYNP 452 A+G G+ P Sbjct: 467 LVQALGGGFQP 477 >gi|224823775|ref|ZP_03696884.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224604230|gb|EEG10404.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 461 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 91/406 (22%), Positives = 182/406 (44%), Gaps = 11/406 (2%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW+ F D L+ L+++ L++N + AT ++ A+ L PS AS Sbjct: 54 RWWQRFGDAELDTLIELMLERNNDLAAATLKVRRARLAADLADDALSPSLAASADSSASH 113 Query: 111 NLKTNSTGQLDS-----DWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSY 164 +LK T Q + +++DL+G+ H + A Q +L++I Y Sbjct: 114 SLKHGGTTQSHAVSASVSYELDLWGKLAHQRDAKVWEAKATEQDKQSTRLSLIGTTATLY 173 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + K+R++++ + ++ +L + GA S+L L+ E + S ++ L + Sbjct: 174 WKIGYLKQRLALSQDSIAYAERTRQLVRAQKAAGAASQLDLLNAEQTLASQQASHTELMQ 233 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + +S L P +++ + P I G+PA L+ RPD+ E + Sbjct: 234 QLAEARNALSLLFDDPPGSRFQELERLPEHALP----AIAAGVPAQLLARRPDLAAAELR 289 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSN 343 L ++A ++ YP +SL GS+ + N + G L LP ++ N Sbjct: 290 LRATLASGDATRASYYPDISLTGSLGSSSTTLSQALSNPVATLGAGLTLPFLQWRAMQLN 349 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +E+ Q+ + +++T+ A+ +VENAL++ + + KL+ ++ ++ L + Sbjct: 350 SKVSEAEYQQAVVEFRQTLYQALADVENALSARRQYQAQGEKLEASLSAASQAERLYEVR 409 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G +L D L+ + + ++ L + + V +Y A+G G Sbjct: 410 YRAGAAALKDWLEAQETRRQADIALLQNRYNQLANQVTVYQALGGG 455 >gi|209515268|ref|ZP_03264135.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209504249|gb|EEA04238.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 460 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 88/381 (23%), Positives = 171/381 (44%), Gaps = 35/381 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS----SYASIS 105 +WW F T+L+ LV L+ + T+ A +R+ AA E + + + L PS AS Sbjct: 35 EWWRLFGSTALDALVDEGLRNSPTLAAADKRLAAAHEQLRGQIHSSLLPSVDLVGQASRG 94 Query: 106 HRF------IPN--LKTNSTGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNV 156 PN L + G + + + DLFG R ++ A +D Q + A+ + Sbjct: 95 RDLGIPVPGAPNTLLYSEFVGVVQAQYAFDLFGAVRQTNAARSARVDVEAYQREAARRAL 154 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + I+A + I +++ L + + + G+ + ++ I ++ Sbjct: 155 ATNIVTATIEAAMLRAEIEATERLIALAGEQAHDTERHYELGSLTHGDVLAARQSIATLS 214 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL---YIP--INIGIPADL 271 ++ L + + H ++ LLG + +P+L ++P + + +P+DL Sbjct: 215 VNVAELRQRLVVTRHALAVLLGR---------TPDAAPPEPDLASLHLPEDLPVVLPSDL 265 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSFG 327 +R RPDI E L + A++G+A + L+PSLSL S+ S+P G W G Sbjct: 266 LRARPDIEAAEAALKAAAAEVGVATAQLFPSLSLTASMG-QGGFSWPLALSGAGAIWGIG 324 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKL 386 + +F G + + RRA A E ++ +++TVL + + V + L S+ D + + Sbjct: 325 ATISQALFHGGALVAQ-RRAAIDAYEAAVSDYKQTVLASFENVADTLASLEHDAQALEAA 383 Query: 387 QHAVELHKKSMSLSMINYRQG 407 A +++ + +R G Sbjct: 384 SGATREAREAFDEAASRHRLG 404 >gi|332288225|ref|YP_004419077.1| copper/silver efflux system outer membrane protein CusC [Gallibacterium anatis UMN179] gi|330431121|gb|AEC16180.1| copper/silver efflux system outer membrane protein CusC [Gallibacterium anatis UMN179] Length = 456 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 91/416 (21%), Positives = 180/416 (43%), Gaps = 27/416 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRF 108 +WW+ +ND LN+LV +AL+ NL + ++ +N A K N+L ADL P+ + Sbjct: 49 EWWKLYNDPQLNQLVDLALKNNLDLAKSAVAVNIALYKANLLG--ADLVPTFSGGSESQA 106 Query: 109 IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISK 159 ++K+ TG L+ + +DL+ R+ +S+ A A V+ A+L +I+ Sbjct: 107 RKDIKSGGNSVITHTGNLNISYTLDLW--RKLADSADAAEWEHKATVEDLAAARLALINS 164 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +I +Y + + I + Y + + K G LS + + + + + Sbjct: 165 VINTYYSLAYLNDAIKATEDSVRYYNEIDNVVQNKQRYGVIDGLSSAQAKQAVLMARNTL 224 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY---IP-INIGIPADLIRNR 275 L+ + + LL T+ LH P+L +P +N+ +P +I NR Sbjct: 225 LELQAQQKTAQQTMHNLLNLKPTDPLHIQ-------LPDLLSVKLPGVNLNVPVSVIANR 277 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPI 334 PD+R E +L + + +P +SL GS+ + + +T + G + LP Sbjct: 278 PDVRAAEYRLQSAFKDAKAMQKSWFPQISLAGSLQVQGNKVSNATDTQYGVGTLGITLPF 337 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 +K N++ +E++ + + +++++ NA+ E++ + + ++ LQ K Sbjct: 338 LSWQTVKWNVKISEANYEVARLGFEQSITNALNEIDALYFAYQQSQRSYNNLQDKYNYDK 397 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G L D L ++ + K QL ++ +Y A+ Y Sbjct: 398 RISQYYRDRYNAGVSELKDWLTAANTEKSSQISILNQKYQLIQNETAVYQAMAGYY 453 >gi|194366032|ref|YP_002028642.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194348836|gb|ACF51959.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 478 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 103/473 (21%), Positives = 205/473 (43%), Gaps = 31/473 (6%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------K 51 + +R ++ + C GP+Y H+P S ++ ++ + Sbjct: 3 VRTVRGGLLALLLPMTACVSGPDY---HLPASAVAASPRAARAFVSGQEASFSHDAPPDR 59 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL------SVRADLFPS---SYA 102 WW+ + D L+ V+ AL N + A + A +L SV+A++ S ++A Sbjct: 60 WWQLYGDPQLDAHVREALAANTDLRAADANLRRASATVLEYRARGSVQAEVDASGTLTHA 119 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + ++ + G L + +DL G RR IE++ A+ ++ A D ++ V + + Sbjct: 120 GGYTQASAAPQSYALG-LHLSYPLDLAGGIRRGIEAANADAEAVAAARDQVRVVVAAAVT 178 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ ++ Q+L + + +E + G + + + A + IP Sbjct: 179 RAYLRVCTSNHTLTATRQVLAIQRATLEATRRLAAGGRGTDFDVSRAGAAANRSAAGIPH 238 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L + + ++ L+G ++ + ++ P L + +G L++ RPDIR Sbjct: 239 LLAERQATLFELAALMGRLPADYPR--EAEACPQPPELEQALPVGDGWQLLQRRPDIRAA 296 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKLYLPIFDK 337 E+ LA + A IG + LYP ++L S + H S G+ S GP L ++ Sbjct: 297 ERSLAAATAMIGAETAGLYPQITLGASSGVAGTPAHLLSADGFGA--STGPVLSWHWPNR 354 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 K+ I A ++A ++ VL A+++ E AL++ ++ + L A ++ Sbjct: 355 RVAKARIAAAGANADTALASFDSIVLQALRQTETALSACTQELEREHSLAQARMDAARAA 414 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + YR GR LD+L + A A E L+ ++ Q +DL++++G G+ Sbjct: 415 GQAQQLYRFGRIDFLDVLSAQAALADAESALATSRAQRIDRQMDLFLSLGGGW 467 >gi|302346847|ref|YP_003815145.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella melaninogenica ATCC 25845] gi|302150367|gb|ADK96628.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Prevotella melaninogenica ATCC 25845] Length = 473 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 98/431 (22%), Positives = 188/431 (43%), Gaps = 50/431 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 W E F D L L++ ALQ N + + + A+ I + +A L PS A+I Sbjct: 54 WREFFQDPMLQTLIETALQNNQDLKITLQELAIARSAINAKQAALLPSVTANIGAGVSKV 113 Query: 106 ------------------HRFIPNLKTNSTGQLDSDWKIDLF-----GQRRHIESSLANL 142 H+ IP + + + L DW IDL+ G++ +E LA Sbjct: 114 GRYTAEGAGNVGTEMTPGHK-IPTVIPDLSPSLQVDWTIDLWNKLNSGKKAAVERYLA-- 170 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 S Q I K +++ + +Y ++S+ Q + L K + ++ ++ A ++ Sbjct: 171 -SEAGQRAI-KSQLVADVAENYYLLLALDYKLSVMQQYISLQKDAVRIARIQKEADADTQ 228 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L++ K +AE+ ++D L +S +N++ LLG F +Q+ +F L +P Sbjct: 229 LAVEKFDAELAKAQADEYLLRQSIVETENNLNLLLG----RFPQTIQRTKVDF---LQLP 281 Query: 263 INI---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---- 315 + + L+ RPD+ E +L + + A+ + PS +++ +I L N Sbjct: 282 MPTTAHSLSTQLLLQRPDVIQAEHQLKAAKWDVETARKEFLPSFNISAAIGLNAFNPKYL 341 Query: 316 -SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 P + G L P+ +K I++N +A++ E + +T+L A E + Sbjct: 342 FKLPESLAFNALG-GLTAPLINKKAIQANFAQADALQIEALYNYDKTLLTAFIETSTLQS 400 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 I+ K + Q + +++S + Y R + L+++D ER +++L AK Q Sbjct: 401 KISNIKLLQQFKQKQNDALVRAVSAAQKLYLNNRATYLEVIDSERGQLDCKMELIDAKSQ 460 Query: 435 LAKSYVDLYIA 445 + +++Y A Sbjct: 461 QLSTLIEMYSA 471 >gi|237508446|ref|ZP_04521161.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] gi|235000651|gb|EEP50075.1| outer membrane protein OprM [Burkholderia pseudomallei MSHR346] Length = 619 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 103/473 (21%), Positives = 203/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L +P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPASLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A +++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVASYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|116049190|ref|YP_792008.1| putative outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa UCBPP-PA14] gi|296390384|ref|ZP_06879859.1| putative outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa PAb1] gi|115584411|gb|ABJ10426.1| putative outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa UCBPP-PA14] Length = 482 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 98/421 (23%), Positives = 190/421 (45%), Gaps = 23/421 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 111 N-----LKTNSTGQLDSDWK----------IDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + L + +L S WK +DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEELRSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RPD+R E++LA + A+ +A+++LYP +S A T + G ++ GP L Sbjct: 291 RPDVRAAERRLAAADARRALAEAELYPRISF-AVGAETSAATLAGLGGSGALAYAAGPLL 349 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 ++ + + A + + VL A++EVE AL +++ LQ A+ Sbjct: 350 GWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGERQRRADLQRAL 409 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ NYR G L++LD +R+ L A+ ++A+ V+L+ A+G G+ Sbjct: 410 DEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQVELFRALGGGW 469 Query: 451 N 451 Sbjct: 470 Q 470 >gi|325525432|gb|EGD03257.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 317 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 29/316 (9%) Query: 6 AIFSLFIVLLA-GCTVGPEYTKPHMPLLPTQFSIG-----------NSKNLINIDTLKWW 53 A+ ++ + L A GCT+ P Y +P P+ S G S N + W Sbjct: 6 ALTAIAVALFATGCTMAPHYKRPDAPVSQAFPSGGVYATQPGAAGARSANGQEATAIGWR 65 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------- 103 E F D L +L++IAL+ N + + I AA+ RA LFP+ + Sbjct: 66 EFFVDPRLQRLIEIALKNNRDLRVSVLNIEAARAQYQITRAGLFPTLDGTGTGSIQRVPQ 125 Query: 104 -ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKL 160 +S P + L + W++DLFG+ + + + +LA L ++YA+ +++++S++ Sbjct: 126 GLSQTGAPYISRAYNVGLSASWELDLFGRVQSLKDQALAQYLSTSYAR-QATEISLVSQV 184 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ ++ + + L + + +L+ L+F G S+L L + + ++ ++ Sbjct: 185 ADQYLTLLSTEDLLKVTENTLKTAQASYDLTKLQFDNGTGSELDLRQAQTIVEQALANQQ 244 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 ++ V+ + L+G P + L NL + G+P+DL+ RPD+ Sbjct: 245 AQARARAQAVNALVLLIGEPLPDDLPPGMPLDAQ---NLLTDVPAGLPSDLLTRRPDVMQ 301 Query: 281 QEKKLADSVAKIGIAK 296 E+ L + A IG A+ Sbjct: 302 AEQTLLAANANIGAAR 317 >gi|312959077|ref|ZP_07773596.1| RND efflux system, outer membrane lipoprotein [Pseudomonas fluorescens WH6] gi|311286847|gb|EFQ65409.1| RND efflux system, outer membrane lipoprotein [Pseudomonas fluorescens WH6] Length = 523 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 95/470 (20%), Positives = 200/470 (42%), Gaps = 45/470 (9%) Query: 15 LAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++GC + P+ + L T +I ++ + T +WW+++ D L++ V++A + Sbjct: 41 ISGCIGTGGIAPQGQALNANTLATDEAIQSAAQDAHWPTAQWWQAYGDPQLDRWVELATR 100 Query: 71 QN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS------ 122 + + + A R A + L +S ++ P + G+L Sbjct: 101 DSPSMAMAAARVREARAMAGVAESAESLQINSDTTLKRHNWPEDQFYGPGELSGANTWDN 160 Query: 123 ------DWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNVISKLIPSYID-ARHFKE 172 + +DL+G R +S +D A+ A A+L + + ++ +YI + H+ Sbjct: 161 NSSLGLSYPLDLWG--RESNASERAVDLAHMSVADARQARLELQNNVVRAYIQLSLHYAN 218 Query: 173 RISIA------HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 R +A QILDL K + G + L + + E+ + + L+++ Sbjct: 219 RDIVAATLAQQQQILDLANK-------RLNAGIGTHLDVSQAESPLPETHRQLDALDEAI 271 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ + ++ L G E +Q+ S + L +P + PA L+ RPD+ ++A Sbjct: 272 ALSRNQLAALAGKGPGEGAQ-LQRPSLSLAAPLKLPSTL--PAQLLGQRPDVVAARWQVA 328 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIK 341 I +A + YP++ L GS+ G ++S GP L LPIFD G+++ Sbjct: 329 AQARGIDVAHAGFYPNVDLVGSLGYMATGGGMLAFLAGKKFNYSVGPALTLPIFDGGRLR 388 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A + + +T++NA+K + + L K +V +K+ ++ Sbjct: 389 AELGAASAGYDLAVARYNQTLVNALKGLSDQLIRRESMDKQSLFAAQSVASAQKTYDIAT 448 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G L++L+ + + + + + +L A+G G + Sbjct: 449 VAYQRGLTDYLNVLNAQTLLFRQQQIEQQVQAARLSVHAELVTALGGGLD 498 >gi|331010860|gb|EGH90916.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 490 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 94/398 (23%), Positives = 173/398 (43%), Gaps = 45/398 (11%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINI---DTLKWWESFNDTSLN 62 L ++++GC++ PEY +P +P+ Q S G++ I + + E L Sbjct: 22 LLSLVISGCSLIPEYQRPALPVPADQLSAVVPAGDASIAIALTADEEALAAELSPKGELR 81 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIP 110 L++ AL N A R++ A+ RAD FP+ A + R+ Sbjct: 82 VLLQSALTFNRDFRVAVLRVDEARAMRGITRADRFPTIAAGVQRNRQHFDNAAADERYGQ 141 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDAR 168 +L S G SD+++D FG+ R + + + L S Y Q A+ +++++ +++ R Sbjct: 142 DLSIASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALVAEVARAWLAER 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDIPT 221 A + D ++ + + QGA S +L + + +++ SD Sbjct: 199 LAAAVQQDAQTVHDARLMLVKAAEEQQRQGAISLDDLMAQRLDTLTAQQQVQDALSDHAN 258 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIR 279 ++ + L GY A L + L P +P+ + R DIR Sbjct: 259 ASQALLL-------LTGYSAV--LPATTPDTPALTAALVEPPAWLSNLPSQRLLERFDIR 309 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFD 336 +E+ + S A IG A++ +PS+ L+ S+ L D+ F + W F P+L LP+FD Sbjct: 310 QREEAVKASNANIGAARAAFFPSIKLSTSVGLQSDSLRTLFSNGSGTWLFSPQLNLPLFD 369 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 G+ ++N+ A Q +++ + NA +E+ LT Sbjct: 370 GGRNQANLDLAHVRQQIAVAEYEKAIQNAFREMAGVLT 407 >gi|255589058|ref|XP_002534818.1| Cation efflux system protein cusC precursor, putative [Ricinus communis] gi|223524528|gb|EEF27567.1| Cation efflux system protein cusC precursor, putative [Ricinus communis] Length = 407 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 70/303 (23%), Positives = 148/303 (48%), Gaps = 14/303 (4%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N+++++ +Y + ++ Q + + + +E+ + L++ + EAE++ Sbjct: 102 NLVAEVAHAYYELIALDNELTTLDQNIKIQQNALEVVKQLQQYARANSLAVKRFEAEVQK 161 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S L++S + I+ LLG +Q+ S +F + G+P++L+ N Sbjct: 162 NQSRQYVLKQSIVETENRINYLLGRTP----QPIQRASADFMHMQNKVMQTGVPSELLAN 217 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGP 328 RPDIR E +L+ + I +AK++ YPS S+ + + P Y + SFG Sbjct: 218 RPDIRQAELELSAAKLNIDVAKANFYPSFSIRAGLGFQAFD--PKYLLNIPASVMASFGG 275 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIVTKLQ 387 +L P+ ++ I++ + A + + +++ ++NA EV N + +I N DK K + Sbjct: 276 ELVAPLINRNAIEAQYKSANAVQIQAAYDYEQKIINAYMEVANQIANIDNLDKNYQLKNK 335 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE +S+ ++ ++ R +++L +R +++L K+Q + VDLY ++G Sbjct: 336 Q-VEALTQSIDVANQLFKAARADYMEVLLTQRDALDAKMELIETKQQQVAAVVDLYRSLG 394 Query: 448 SGY 450 G+ Sbjct: 395 GGW 397 >gi|255035688|ref|YP_003086309.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] gi|254948444|gb|ACT93144.1| RND efflux system, outer membrane lipoprotein, NodT family [Dyadobacter fermentans DSM 18053] Length = 468 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 100/468 (21%), Positives = 210/468 (44%), Gaps = 37/468 (7%) Query: 10 LFIVLL-AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LF+ L AGC V P +P F + + I + + D +L +L+ A Sbjct: 10 LFVALTWAGCKVSKNVPLPDA--VPGAFRSAAAGDSAGIGAIPFRTFITDPALLQLIDTA 67 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------------HRFI--P 110 L +N + A + I+AA+ R P A ++ ++F+ Sbjct: 68 LIKNYDMQIALQNIDAAEVLFKQARQGYLPELKAQLTANTSRPSDNSLNGFTLNQFLGTS 127 Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDAR 168 +++ STG + + W+ D++G+ R ++LA L +A A+ + + +++++ Y + Sbjct: 128 HIEDYSTG-MTAVWEADIWGKIRSRKAAALAGFLQTAEARKAL-QTQLVAQVAQGYYNVL 185 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 ++ +A + L L + L+ G + L++ + EA+ + IP LE+ + Sbjct: 186 MLDAQLEVARKNLMLNDSTLRTIQLQAVAGQVTSLAVQQAEAQRLTASQLIPQLEEQATL 245 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLA 286 + + L+G + Q+ L IP ++ G P+ L+ R DI+ E L Sbjct: 246 QENALHVLIGKMPQAINRKSRLQA------LTIPEELHAGFPSALLSRRSDIKSAELALN 299 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FG---PKLYLPIFDKGKIKS 342 + AK+G A++ YPSL + + + +N S FG + P+F +G++K+ Sbjct: 300 AANAKVGEAQASFYPSLVITAGGGINALKASNWFNIPASLFGLVAGSITQPVFQRGQLKA 359 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ A+ ++ I ++++VL A+ EV + LT + + K + + + + + Sbjct: 360 NLEIAKIEREKTVIAFRQSVLRAVGEVSDELTKVEKLKAQYRAAAERTRVLETASRNANL 419 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +G + L+++ + + E+ + K + + V LY ++G G+ Sbjct: 420 PFNRGMANYLEVITAQGNLLQSELQPATIKTRQLNAVVGLYRSLGGGW 467 >gi|326795008|ref|YP_004312828.1| outer membrane efflux protein [Marinomonas mediterranea MMB-1] gi|326545772|gb|ADZ90992.1| outer membrane efflux protein [Marinomonas mediterranea MMB-1] Length = 463 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 105/475 (22%), Positives = 216/475 (45%), Gaps = 44/475 (9%) Query: 1 MNILRAIFSLFIVL--LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESF 56 +N ++ + +L I L LA T+G E F+ ++L N++ + W++ Sbjct: 3 VNAIKKLGTLAICLPLLACSTLGTEENSRE------NFAEKAQQDLTNVEESRSIEWQAL 56 Query: 57 N-------------DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS 103 + D++LNK+++ AL N ++ + + A++ + S + + PS A Sbjct: 57 DTATQNNYLTDLIQDSTLNKVIQQALNANPSLQKTALTLKASQWKLKSNQGEHLPSVEAG 116 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIP 162 + + TN + ++ W++DL+ + E + A +L S A +K +++ ++ Sbjct: 117 LGADRSKSSDTNYSAKISVSWELDLWQKLADSEKATAKSLASEAALYQASKDALVANVMK 176 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL-EAEIKSIESDIPT 221 +++ + I+I + L L + N L +F G + L KL EA S +S Sbjct: 177 TWLALTAKQHAIAIEEKRLALLESNEALIVKRFKNGLDN---LEKLDEARTSSSQSRASL 233 Query: 222 LE--KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 LE ++ + + LLG + NN PN+ + N + ++ RPD++ Sbjct: 234 LEYQENLAIKKRELEILLGSDEAILIPI-----NNHYPNVDLTFN-NLHTQRLQRRPDLK 287 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDK 337 + + +A D+ PS SL+ ++ + D+ T WS +L P++ Sbjct: 288 SAFLDIQAADLNTSVAYKDMLPSFSLSAALNDSADSPSSALFTAPIWSLAAQLTQPLYKG 347 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH---AVELHK 394 G++K+ A+ + + Y +++T+L A+ EVENAL ++K + ++QH A++ + Sbjct: 348 GQLKAAAEVAKLNTAQAYQAYRDTLLTAVNEVENAL---GQEKVLQQQVQHISAALKSSQ 404 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ YR G L +++ +++ T +E L + V L +A+G G Sbjct: 405 SNLDQYQKKYRSGLIELSELITVQKTTFDLEAQLDELIYNHLANRVTLGLALGLG 459 >gi|107100687|ref|ZP_01364605.1| hypothetical protein PaerPA_01001713 [Pseudomonas aeruginosa PACS2] Length = 482 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/421 (22%), Positives = 190/421 (45%), Gaps = 23/421 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 111 NLKTNS---------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + + T +LD +++DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEDVRSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RPD+R E++LA + A+ +A+++LYP +S A T + G ++ GP L Sbjct: 291 RPDVRAAERRLAAADARRALAEAELYPRISF-AVGAETSAATLAGLGGSGALAYAAGPLL 349 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 ++ + + A + + VL A++EVE AL +++ LQ A+ Sbjct: 350 SWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGERQRRADLQRAL 409 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ NYR G L++LD +R+ L A+ ++A+ V+L+ A+G G+ Sbjct: 410 DEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQVELFRALGGGW 469 Query: 451 N 451 Sbjct: 470 Q 470 >gi|238027229|ref|YP_002911460.1| hypothetical protein bglu_1g16150 [Burkholderia glumae BGR1] gi|237876423|gb|ACR28756.1| Hypothetical protein bglu_1g16150 [Burkholderia glumae BGR1] Length = 517 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/399 (22%), Positives = 177/399 (44%), Gaps = 39/399 (9%) Query: 17 GCTV-GPEYTKPHMPLLPTQFSI-----------GNSKNL-INIDTL-KWWESFNDTSLN 62 GC++ GP P MP P Q+ G +++ + L +WW+ + L+ Sbjct: 50 GCSLFGPSGAAPEMPS-PVQYGAAPLPERTVAAQGVAQHFEVGAQPLPEWWKRYRSGRLD 108 Query: 63 KLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS 116 LV+ L+ + T+ A + AA+E + + + + L P+ A + R + P + Sbjct: 109 ALVEEGLRASPTLAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLGMPGFGPQT 168 Query: 117 T------GQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 GQL + + +DLFG R L +D Q+D + + + ++ + I + Sbjct: 169 VLYNAFVGQLQASYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSAT 228 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E++ +++ L + + + + G+ S L+ S+ + +P L + + Sbjct: 229 LAEQLRTTERLVALANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSA 288 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNRPDIRYQEKKLAD 287 H ++ LLG Q + L++P + + +P+ L++ RPDIR + L Sbjct: 289 RHALAVLLGRTPD------QAPDDLALAELHLPEDVPVAVPSTLLQTRPDIRAADAALKA 342 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A +G A + L+P +SL+ G + + G WS G L P+F G + + Sbjct: 343 AAAAVGAATAQLFPQISLSAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLAQR 402 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 R A++S ++ TVL A + V ++L +++ D + + Sbjct: 403 RAAQASYAAAVEQYKATVLAAFQNVADSLAALDNDAQAL 441 >gi|293394753|ref|ZP_06639044.1| RND efflux system outer membrane lipoprotein [Serratia odorifera DSM 4582] gi|291422704|gb|EFE95942.1| RND efflux system outer membrane lipoprotein [Serratia odorifera DSM 4582] Length = 483 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 105/470 (22%), Positives = 210/470 (44%), Gaps = 42/470 (8%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 ++LLAGC + P L+ TQ + K + +WW S ND L++L+ ALQ Sbjct: 15 VLLLAGC-ASTDNIAPQSTLMDTQQLQLAQPKVSSLAISPQWWRSLNDPQLDRLMTQALQ 73 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNL-------------KT 114 + ++ QA R+ A+ + A P+ + + R N+ + Sbjct: 74 SSPSLRQAAARVREAQSVMGEASAANGPNLDLNAGTTRQRIPQNVNMGLGYPHRPIYESS 133 Query: 115 NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY--IDARHFK 171 NS G L+ ++ D +G+ R ++++ A +D+A A+ + A L + S + +Y + + + + Sbjct: 134 NSLG-LNLAYEFDWWGKYRNQVKAAKAQVDAARAEQEQAALTLTSSVASAYYLLQSNYAQ 192 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E++ Q ++ + +L ++ G + + +A+ S + I L+ H Sbjct: 193 EKL--LQQEVNNNDRLTQLRQQQYQAGLSGVDVPQQTKAQSDSAKQQILQLQSQIEQLKH 250 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L G+ Q + + + + + ADL+ RPDI Q + + + Sbjct: 251 QLAALTGHGPNAM---QQLRPVSLPADSLLAPKGELTADLLGKRPDIAAQRQLVESYSQR 307 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS-------FPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A+ + YPSL+++ LT N+ F + W+ P L LPIF G ++S + Sbjct: 308 VSAARKEFYPSLTISAFAGLTTTNTSGTSPNLFEAASQAWNIAPALSLPIFHAGALRSKL 367 Query: 345 RRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 ES+ +Q + + +T+LNA++E +A+T + + + A + ++ ++ Sbjct: 368 GE-ESALYDQAVEGYNQTILNAVQETADAITVQQSTAQQLQQAASASQSMQQVYRVANAR 426 Query: 404 YRQ---GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ GR LL + EV +A + ++ + L A+G GY Sbjct: 427 YQAGIIGRDELLSSQTQLIQQQQAEV---VASSNMMQAKIGLIRALGGGY 473 >gi|225165841|ref|ZP_03727619.1| outer membrane efflux protein [Opitutaceae bacterium TAV2] gi|224799912|gb|EEG18363.1| outer membrane efflux protein [Opitutaceae bacterium TAV2] Length = 428 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/403 (22%), Positives = 177/403 (43%), Gaps = 38/403 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-- 117 SL + AL+ N I QA E+I + I+ VRA P + S++ + N K ST Sbjct: 18 SLQAALDFALEHNYAIRQAREQIEEQEGVIIEVRAQAIP--HLSLTGNYGLNDKEISTHI 75 Query: 118 GQLDSDWKIDLF---------GQRRHIESSL----ANLDSAYAQVDIAKLNVISKLIPSY 164 G D DW I L G R +++ A + S A + A L+V ++ Y Sbjct: 76 GDRDQDWGIALTVRQALYSGGGIRAALDAQTLVRQAAILSLQAIISDALLDVRTR----Y 131 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 D +E+I + + +DL K+ ++ + ++ G+ S +++ E E+ + + + T Sbjct: 132 YDVLLAREQIGVQQENIDLLKEQLQTATNRYEAGSVSHFDVLRAEVELANAQPGLITARN 191 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADL---IRNRPDIRY 280 ++R+ + + LGY + L ++ F L Y P++ + + + NRP+++ Sbjct: 192 NYRIAIDELRRALGYTNPDVLR--PGRTPEFTDTLTYTPVSYDLLPSIQTALENRPELQR 249 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDK 337 ++ + + + +A +D P L G + D ++ W G + IFD Sbjct: 250 LDRIVRARESGVTVAVADYRPKFDLVGGYQVRRDTLSSALSDSRDGWLVGVEGNWAIFDG 309 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 + +R+A S ++ I Q L+ +V A +S+ E ++ + V +++ Sbjct: 310 AATRGRVRQARSQLEQAKIALQSERLSIEVQVRRAHSSLQEATELASAAGKVVSQATEAL 369 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK-RQLAKSY 439 L+ Y G + LD L + V L++A+ QL +Y Sbjct: 370 RLADARYAAGSATQLDQL-------QARVALTLARLNQLQANY 405 >gi|330880892|gb|EGH15041.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 370 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/348 (22%), Positives = 162/348 (46%), Gaps = 18/348 (5%) Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N N T L + +++D +G +S+L +L ++ +L ++ + Y Sbjct: 30 NNTNNFTSDLTASYEVDFWGGIAAGRDSALQSLRASEFDQATVELALLGNVADRYAQTLA 89 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E+ IA L + + L ++ G+ + L L + + + + + ++P +++ Sbjct: 90 AREQGRIAELNLANAQSVLRLVQTRYDSGSATALELAQQKNLVATQQRELPRVQQLANEQ 149 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +++ LLG P + + F + I G+P++L+ RPD+ E +LA + Sbjct: 150 LISLAALLGQP----VQNLNLGDQAFATLNWPDIGPGLPSELLTRRPDLAKAEAELAVAQ 205 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAE 348 A + +A++ + P L+L+ + + + S L PIF+ G++ + RA Sbjct: 206 ANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDRAT 265 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMIN--YR 405 + +E T++ ++N+ +VE AL SI D++ + H EL + + ++ Y Sbjct: 266 ARQEELLETYRGAIINSFADVEKALNSIQGLDQQ---RYWHEEELKQAQTAFNIAQSRYE 322 Query: 406 QGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G LL +L+ +R V V L +A+ Q + + LY A+G G+ Sbjct: 323 EGAEDLLTVLETQRTLYQAQDVSVQLRLARLQ---ASIALYKALGGGW 367 >gi|296392013|ref|ZP_06881488.1| putative outer membrane protein precursor [Pseudomonas aeruginosa PAb1] Length = 442 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 104/431 (24%), Positives = 192/431 (44%), Gaps = 47/431 (10%) Query: 52 WWESFNDTSLNKLVKIALQQ--NLTILQATERINA---------------AKENILSVRA 94 WW D L++L+ ALQ +L I +A R A AK + +RA Sbjct: 14 WWTGLGDRQLDQLIGEALQGTPDLQIAEARARQAAATAQAQDAARQPTLDAKASYSGIRA 73 Query: 95 DLFPSSYAS--ISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDI 151 P+S A + R+ +K S G ++ DL+G +R E++L ++A Sbjct: 74 ---PTSVAPAPLGGRY-SAIKYLSLG---FNYDFDLWGGERAAWEAALGQANAARIDSQA 126 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A++ + + + +Y D H +A + L ++ ELS + + G SK+ L + + + Sbjct: 127 ARIGLSASIARAYSDLAHAFTVRDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQ 186 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + E+ ++ LLG L + Q N +L +P +PA+L Sbjct: 187 LATARQQLSAAEQDIASARIALAVLLGKGPDRGLELQRPQPLN-PASLSLPSV--LPAEL 243 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + R DI ++ + I AK++ YP+L+L G AL + + + P Sbjct: 244 LGRRADIVAARWRVEAARRNIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAP 303 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIFD G+ ++N+ ++ + +T++ A+ EV + L + ++ V + Sbjct: 304 AISLPIFDGGRRRANLAERDADYDLAVGQYNKTLVQALGEVSDDLGKLRSLEQQVIDQRQ 363 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI- 444 A + + + L+M Y +G S LD L +++ L +A+RQLA +DL + Sbjct: 364 ARNIARSNFDLAMRRYGEGVGSYLDALSVQQ-------QLLVAERQLASLESQQIDLSVQ 416 Query: 445 ---AIGSGYNP 452 A+G G+ P Sbjct: 417 LVQALGGGFQP 427 >gi|303326596|ref|ZP_07357038.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Desulfovibrio sp. 3_1_syn3] gi|302862584|gb|EFL85516.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Desulfovibrio sp. 3_1_syn3] Length = 476 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/435 (18%), Positives = 189/435 (43%), Gaps = 45/435 (10%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSY 101 N++T +WW + +L++ V++AL++N + + +N A+ + +DL P Sbjct: 52 NLNT-EWWRGYGLAALDRTVELALERNTDLAASAVAVNRAQYEARLITSDLLPGFSAGGS 110 Query: 102 ASISHRFIPN--------LKTNSTGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIA 152 AS+S P + + G+ +++DL+ + R + A ++ + A Sbjct: 111 ASVSRNLKPGHHLEDGKTWRESWQGEAAMSYELDLWRRLRDAYDAKAWEYRASVEDLAGA 170 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L +++ ++ ++ + ++ I++ + + Y++ +E++ ++ +G + + ++ E + Sbjct: 171 RLALVNSVVSAWFRLMYTEQSITLVERNTETYRRILEIARARYREGKATVVEPLQAEQSL 230 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN-------------- 258 +N NI T L E L ++ N +P Sbjct: 231 ---------------LNAGNILTELRTQRAETLETLRNLC-NMRPGETPPPPDGADIMAV 274 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 +P+++ +P + RPDI + +L + + ++ +P L++ ++ L+ D + Sbjct: 275 AAVPVDLNVPIAALAARPDIHAAQARLEGAFKNLEADRAAWFPRLTVGSTLNLSSDTAGR 334 Query: 319 GYNTHWSFG-PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 +N G L LP D ++ N++ +E+ + ++ +++ A+ EV+ A S Sbjct: 335 FFNVPLLTGLASLSLPFLDWNTLRWNVKISEADFESARLSLVQSLTTALNEVDTACASYV 394 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 ++ + + Q E ++ + + QGR SL D L+ + + A+ L Sbjct: 395 LARQTLEQTQQVHERDRRIAAYYGTRHAQGRESLKDYLEALATADNSALSVLSARYTLLT 454 Query: 438 SYVDLYIAIGSGYNP 452 +Y A+G Y P Sbjct: 455 WENGIYKAMGGRYEP 469 >gi|77918281|ref|YP_356096.1| outer membrane efflux protein [Pelobacter carbinolicus DSM 2380] gi|77544364|gb|ABA87926.1| outer membrane efflux protein [Pelobacter carbinolicus DSM 2380] Length = 478 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/417 (21%), Positives = 176/417 (42%), Gaps = 29/417 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHR 107 WW F D +L++L+ A NL + Q R A+ + SV + PS A + Sbjct: 49 WWHIFEDPALDRLMLQAFGANLELDQVLARWQQAEAAVRSVESARRPSLGLDGQAGRQRQ 108 Query: 108 FI---PNLKTNSTGQLDSDWKIDLFGQRRHIES----SLANLDSAYAQVDIAKLNVISKL 160 P + + + + +++D++ R + S + +A A V+ L++ ++L Sbjct: 109 MTFLGPVTADHYSLSVVAGFELDVW---RKLASRSEAARREQAAAAADVEAICLSLSARL 165 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y A + + ++ + Y +E ++ G L + + + + + +P Sbjct: 166 ADLYYTAVEQRAQHALLENTIVSYLDILERVERRYRAGIAPALEVYQARQNLAAARARLP 225 Query: 221 TLEKSFRMNVHNISTLLG-YPATEF---LHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +E H ++ LLG YP L + + N+ +G+P+ L+ RP Sbjct: 226 QVEARLAAAEHGLAVLLGRYPQGGLAGQLAVLPAPAKNY--------PLGVPSQLLNRRP 277 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLP 333 D++ ++ + ++ A ++ +P+ +L G D F N W+ L P Sbjct: 278 DVKAALLRVKSADNRVAEAIAERFPAFNLAGGYGGGADTPRQVFASPNIFWNLLVNLTQP 337 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 I D G+ ++ + R ++ +E ++Q VL A +EVE+AL + ++ V +LQ Sbjct: 338 ILDGGRRRAEVDRRQALFKELLASYQTRVLEAFREVEDALAAERASREQVAQLQARRAST 397 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L+ Y G L +L + + E L A+RQ + L A+G + Sbjct: 398 SAALRLATDRYTLGVSEYLQVLTAQVLHLETESGLLSARRQQVADRISLARALGGHW 454 >gi|297539410|ref|YP_003675179.1| NodT family RND efflux system outer membrane lipoprotein [Methylotenera sp. 301] gi|297258757|gb|ADI30602.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylotenera sp. 301] Length = 492 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 100/469 (21%), Positives = 210/469 (44%), Gaps = 45/469 (9%) Query: 12 IVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 ++ L GC + P+ L + +I ++ + I + WW++++D L+ L+ Sbjct: 25 MISLVGCVSMSGINPKAKSTQAVTLKSGQAIASASH-IEWPKVDWWKAYHDQQLDALIDK 83 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF--IPNLKTNSTGQLDS 122 A+ + T+ A R+N + S+ A+ P +++ RF + + S G D Sbjct: 84 AVSDSPTLRMAQSRVNLVQAYADSIHAETLPNIGGDASAVRQRFTELQFIPPPSAGNWDW 143 Query: 123 D--------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKE 172 D + +DL+G++ I +S+ +++ +V KL +++ + SY+ A ++ Sbjct: 144 DNKMTASIAYDLDLWGRQESIWNASVNETNASKLEVQQVKLELVNAVTRSYVQLAMEYQL 203 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R +A + LD K+ I + G +++ +++ E + + I +++ ++ + Sbjct: 204 R-DLAEEYLDEVKQRIAIKQRSMKAGLGTEMEVIEAETPLPLTRAKIEAIDEHIKLLRNQ 262 Query: 233 ISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQEKKLAD 287 ++ L G P + +P + + + G+P A+L+ RPD+ + Sbjct: 263 LAALSGQGPGA--------GDSITRPTMTLEASAGLPDTLQANLVGRRPDVLAHRLHVEA 314 Query: 288 SVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + I AK YP+++L G I AL GP + LPIFD G+ + N+ Sbjct: 315 AQENIEGAKKAFYPNINLMGFIGFQALGFGQLLSTAAGIAGAGPAISLPIFDGGRRRGNL 374 Query: 345 RRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +S A E Y T ++ A+++V + L + ++K + ++ A+ KK+ L+ Sbjct: 375 SAKTASYDIAVENYNT---VLVKALQDVSDQLVIMQSNRKQIQEVDMALASAKKAHHLAE 431 Query: 402 INYRQGRYSLLDILDIER-ATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++Y G + +LD + E+ + +L +Y L A+G G Sbjct: 432 VSYSGGLSNYQHVLDTNNIVIHQQEIRTQLQAVRL-DAYAGLMRALGGG 479 >gi|15596435|ref|NP_249929.1| outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa PAO1] gi|9947168|gb|AAG04627.1|AE004553_4 probable outer membrane component of multidrug efflux pump [Pseudomonas aeruginosa PAO1] Length = 482 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 98/421 (23%), Positives = 189/421 (44%), Gaps = 23/421 (5%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 111 N-----LKTNSTGQLDSDWK----------IDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + L + L S WK +DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEDLHSQWKHTVRLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RPD+R E++LA + A+ +A+++LYP +S A T + G ++ GP L Sbjct: 291 RPDVRAAERRLAAADARRALAEAELYPRISF-AVGAETSAATLAGLGGSGALAYAAGPLL 349 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 ++ + + A + + VL A++EVE AL +++ LQ A+ Sbjct: 350 SWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGERQRRADLQRAL 409 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + + L+ NYR G L++LD +R+ L A+ ++A+ V+L+ A+G G+ Sbjct: 410 DEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQVELFRALGGGW 469 Query: 451 N 451 Sbjct: 470 Q 470 >gi|325276716|ref|ZP_08142437.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324098153|gb|EGB96278.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 203 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 3/165 (1%) Query: 290 AKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRR 346 A IG+AK+D YPS+ L+GS+ + F ++ ++FGP+L LPIF+ G++K + Sbjct: 6 ASIGVAKADFYPSIRLSGSVGFQAMQLSDFGAWDARRFAFGPQLSLPIFEGGRLKGTLEL 65 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E+ QE I +++ VL A E+++ L N + L AV ++ ++ + Y + Sbjct: 66 REAQQQEAAINYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVE 125 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G L++L ++ A E + ++++ V LY A+G G+ Sbjct: 126 GAVDFLNVLTVQSALLASEEQWIDSSAAVSQALVALYKALGGGWQ 170 >gi|301019244|ref|ZP_07183438.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 196-1] gi|299882293|gb|EFI90504.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 196-1] Length = 488 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/473 (19%), Positives = 207/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL--THDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L H ++ F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAE 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + E+ L + + + L ++GSGY Sbjct: 431 AA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGSGYQ 480 >gi|34496165|ref|NP_900380.1| outer membrane multidrug resistance lipoprotein [Chromobacterium violaceum ATCC 12472] gi|34102019|gb|AAQ58386.1| probable outer membrane multidrug resistance lipoprotein [Chromobacterium violaceum ATCC 12472] Length = 479 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 106/469 (22%), Positives = 206/469 (43%), Gaps = 32/469 (6%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSL 61 A S + LL GC + P+ P + P Q N+++L D + +WW+ + D L Sbjct: 14 AGLSAALTLLGGCAMTPD-MGPAPQIKPLQ-QYQNTQSLPASDGVWANEQWWKKYGDAQL 71 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASIS------HRFIP--- 110 N L+ AL Q + A R+ A+ A P + A+I + +P Sbjct: 72 NALMDEALSQAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDKQSYNNGMPAPA 131 Query: 111 NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYID-AR 168 T+ LD +++D +G+ R + ++ ++L +A A A+L + + L Y + AR Sbjct: 132 GFNTSGRATLDFSYELDFWGKNRASLAAATSDLTAARADAAQARLMLTASLAAGYAELAR 191 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 F ER A Q L++ +L ++ QG ++ L + E+ + +D+ ++S + Sbjct: 192 LFSER-DAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARADLAAADESIAL 250 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H+++ L+G L + + F+ +P + A+L+ RPD+ + + Sbjct: 251 QRHSLAALIGAGPDRGLAIARPAAGLFREQ-RLPATLA--AELLGRRPDLAAARLRAEAA 307 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 +I +A++ YP+++L + D + G GP ++LPIF G+++ Sbjct: 308 AKRIDVAQAQFYPNVNLTAFVGAQSLGLGLFDKAGSGIA---GVGPAIHLPIFRGGQLQG 364 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 R A ++ T+ A++EV +A++S + + Q A+ ++ +S Sbjct: 365 QYRAARGDYDAAVASYDATLSQALREVADAVSSQAALTPQLQQRQQALTAADEAYRVSRN 424 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + G + LD+L E + L+ + + V L A+G GY Sbjct: 425 RFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQ 473 >gi|34496223|ref|NP_900438.1| outer membrane multidrug resistance lipoprotein [Chromobacterium violaceum ATCC 12472] gi|34102077|gb|AAQ58444.1| probable outer membrane multidrug resistance lipoprotein [Chromobacterium violaceum ATCC 12472] Length = 476 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 94/474 (19%), Positives = 200/474 (42%), Gaps = 54/474 (11%) Query: 10 LFIVLLAGC-TVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 L +L+GC + GP+ M + ++ +N+ WW ND L++LV+ Sbjct: 19 LISAVLSGCASFGPDAAPDQMVGADQLKLAVAGQQNV----RADWWRQLNDPELDRLVEA 74 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNS------ 116 L+ ++ A R+ A+ + V + P ++ I + L N Sbjct: 75 TLKDAPSLKLAAARLRQARAAVGIVESKDGPQLDAMANAVQIHADPLKALPHNDKDYINA 134 Query: 117 -TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID-------A 167 T L W+ D +G+ + ++L + + +L + ++ Y + Sbjct: 135 YTAALVGSWEFDFWGKNHAAVSAALGQQQAVAYEGQQTRLLLTQAVVAQYTQLQRSLAQS 194 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R +R++IA L + + L +++S+ +L+ + ++++DI Sbjct: 195 RLLSQRLAIAQSRQKLTQARVNAGLLPGDNQRGNEVSIERLQQQQSALDNDIAR------ 248 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNRPDIRYQEK 283 + H ++ L G +Q ++ P P + A+L+ RPDI Q Sbjct: 249 -SRHALAALTGQGP--------QQQDSLNPGKLDAAPQPALDKLDANLLGRRPDIAAQRA 299 Query: 284 KLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 ++ A + A+++ YP++ L G +L D + ++ W F P + LPIF G++ Sbjct: 300 RVESMTASVKEARAEFYPNVKLTVFAGQSSLKMDQLWKSESSLWGFMPAISLPIFHSGQL 359 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +SN+ + ++ + +TVL+A+++ +A++ ++ + + + A++ +K+ Sbjct: 360 QSNLSKQQAGYDMAVQQYNQTVLDALRDAADAVSGWQNSQRQLQQSERALQSSRKANDSM 419 Query: 401 MINYRQG---RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 R G + SLLD D + +D A R ++ L A+G G++ Sbjct: 420 AARLRAGLVNKLSLLDSQDALLSQQSANIDAQAANR---LAWASLNTALGGGFD 470 >gi|167582150|ref|ZP_02375024.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia thailandensis TXDOH] Length = 353 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 24/276 (8%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L + + ++ +YID + IAH D + EL+ + G ++L + + EA + Sbjct: 11 QLELEANVVRAYIDFAKNYALLDIAHATYDRQNELAELARKRLRAGIGTQLEVSQAEAPL 70 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIP--- 268 I + E++ ++ H ++ L G P ++ +P L + N G+P Sbjct: 71 PDYSRQIDSYEEAIQLGRHQLAALAGKGPGA--------GASLGRPKLALDANAGLPSAL 122 Query: 269 -ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNT 322 A+LI RPD+ + I +AK+ YP++ SL G +++ N Sbjct: 123 PAELIGRRPDVVAARWTVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNG 182 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINED 379 WS GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ Sbjct: 183 GWSAGPALTLPIFEGGRLRAQLGVAAAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQ 242 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +K + AV L ++S LS + +G +++L Sbjct: 243 QKDAAR---AVSLTRRSYDLSHTGFSRGLTDYVNVL 275 >gi|88860292|ref|ZP_01134930.1| putative outer membrane transport protein [Pseudoalteromonas tunicata D2] gi|88817490|gb|EAR27307.1| putative outer membrane transport protein [Pseudoalteromonas tunicata D2] Length = 465 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 96/419 (22%), Positives = 183/419 (43%), Gaps = 34/419 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W F D ++ +LV AL +N + ++ ++ ++S A +PS S+ N Sbjct: 53 WLAQFGDENMMQLVHQALDKNYALQAKAFQVAIKEQQLISSGAVFWPSFDVSLRSSRTKN 112 Query: 112 LKTNSTG-----QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSY 164 +T + L+ +++DL+G+ + ANLD Q AK ++++++ ++ Sbjct: 113 TQTETLTTTHSLNLNLSYELDLWGKLSDADRQ-ANLDFLAEQALFMQAKQSLVAQVATAW 171 Query: 165 IDARHFKERISIAHQILDLYKK-------NIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +I A Q+L LY+K N+ + + QG S L + E+ + S Sbjct: 172 F-------KIIEAEQLLKLYQKRAANAEQNLIIIASGYEQGLNSALDVYLTRNEVNNELS 224 Query: 218 DIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + T + + L G YPA E + N P L I++G+PA+L+ +P Sbjct: 225 RVSTQQAELVKAKRILELLTGAYPAGELI------VNADLPKLDSAISLGLPANLLTKKP 278 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYL 332 + +L A + A +P+L L GS+ D+ + WS + Sbjct: 279 ALVASWYQLLAKDANVAYAHKQRFPALKLTGSLG-NSDSELKELLSPSSLAWSLVSNITA 337 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ GK+ + RA Q + +T+ NA +VENALT+ ++ A E Sbjct: 338 PIFNAGKLAAEQERARLDRQISEQNYLDTLFNAFSDVENALTTEQSLQQRYITTVRAQEN 397 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + +L+ Y+ G +L+ ++ + + K QL + ++L++A+G ++ Sbjct: 398 AEAAQTLAFEQYQSGLVEYTTVLESQKRAFDAQSSVIQIKSQLLSNRINLHLALGGAFS 456 >gi|239817236|ref|YP_002946146.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] gi|239803813|gb|ACS20880.1| RND efflux system, outer membrane lipoprotein, NodT family [Variovorax paradoxus S110] Length = 1135 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/470 (19%), Positives = 198/470 (42%), Gaps = 39/470 (8%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + +++++GC + P +P + +P+Q+ G + N + + W D L L+ A Sbjct: 674 TCVVLVVSGCNLTPPLKQPDL-TVPSQWPAGTTAP--NAEPVDWRSFVQDDELRGLITTA 730 Query: 69 LQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDSD- 123 L QN + R A+ RA LFP S +A + P + G + +D Sbjct: 731 LAQNRDLRAYAARAREARAVYAGSRASLFPQIGLSGHAQRAQT-TPQGSLSPLGNIPTDG 789 Query: 124 --------------WKIDLFGQRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDAR 168 +++D FG+++ +L ++ A +N++ ++ +Y+ R Sbjct: 790 RTSNSFDIQAGVTSYELDFFGRQQSATQQTGSLAEAGNKDFAAAHMNLVGEVSNAYLTLR 849 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + +++A+ N ++ G ++L + + ++ +++ ++ FRM Sbjct: 850 ADRALLALANANESGLAANADMIGRAKAAGGAAQLDVYRAQSLLQNARVK----QEEFRM 905 Query: 229 NVHN----ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 V ++ L+G P + + + + G+P+ L++ RPD+ + Sbjct: 906 RVAQDLQWLNVLVGQPVSP----DTGSARPWPERSTAQVAAGLPSSLLQRRPDLLAAYSR 961 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + + + +G AK+ + P++SL G ++ N+ W+ + LP+FD G+ Sbjct: 962 VEAANSGVGAAKAAMLPTISLTALAGGVSRELSTLLSSGNSSWAGVLGVSLPLFDWGRRS 1021 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +NI E +++ A +E NAL + + + + Q V+ +K +++ Sbjct: 1022 ANITANEERLAAAMASYESAAQMAFRETANALIADDHLRPQLEAQQARVQALEKVANIAR 1081 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +R G D +R + L + + A + V+LY A+G G+ Sbjct: 1082 TRFRSGLEDYFASQDAQRELYAEQQQLIELQLKEAVNRVNLYKALGGGWQ 1131 >gi|254498660|ref|ZP_05111378.1| putative RND efflux system, outer membrane lipoprotein, NodT [Legionella drancourtii LLAP12] gi|254352108|gb|EET10925.1| putative RND efflux system, outer membrane lipoprotein, NodT [Legionella drancourtii LLAP12] Length = 493 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 110/491 (22%), Positives = 202/491 (41%), Gaps = 59/491 (12%) Query: 3 ILRAIFSLFIVLLAGCTVG-PEYTKPHMPLLPTQFSIGNSKNLINIDTL--------KWW 53 I+R F L + +L+GC + P ++ P K+L +WW Sbjct: 10 IIRIFFCLCLGVLSGCKISLPTKSQLEHLQAPPNIKQAIDKSLSQRTIFAAGKWPAQQWW 69 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYA----------- 102 + LN L+ +L N +I + RI A++ + +R+ LFP + Sbjct: 70 LDYQSPELNALISESLTNNPSIQEVYSRITVAQQEAMVMRSILFPLVFFDATETRQYLSK 129 Query: 103 -SISHRFIPNLKTNSTG---QLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVI 157 + F P+L N+T L ++ D +GQ R++ S ++ + A+ KL + Sbjct: 130 NGLFRAFNPSLPLNATLLDLSLSFSYEFDFWGQNRNLLSEAIGKAKAQKAEAAETKLIIT 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + L +Y + R + ++++L + L +L +G +S+L + + Sbjct: 190 TALSQAYFAYKTNLMRKHLYVKLVNLRTQVAHLHNLLLRKGLSSRLPALTAAENVLEANK 249 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ + N H I+ L G L M + L IP I + DLI RPD Sbjct: 250 LLASINEELSNNQHLINVLAGRGPDSPLT-MTSRLPQLPQRLQIPATISL--DLIARRPD 306 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPI 334 + Q + K G A S YP+++L G I +L F ++ P ++LPI Sbjct: 307 LMAQIWRAKAWAYKTGAAMSAYYPNVNLVGFIGLESLAWAKFFKIASSTAGLKPAIHLPI 366 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G I++NIR ++ + +L + +E+ + L T QH E + Sbjct: 367 FTAGAIRANIRATKAEFDAAIFAYNNLLLRSTQEILDVLVFAQ------TTYQHNREQDE 420 Query: 395 KSMSLSMINYRQGRYSLLDI-----LDIERATAKVEVDLSIAKRQLAK---------SYV 440 +++Y + RY L+ + LD + A ++ +L + +L K + + Sbjct: 421 ------IVHYAEQRYHLVHLRSQKGLDSQFAVYALQEEL--IQTELVKIMLLYNQYLASI 472 Query: 441 DLYIAIGSGYN 451 L A+G GY+ Sbjct: 473 KLTKALGGGYH 483 >gi|77459866|ref|YP_349373.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens Pf0-1] gi|77383869|gb|ABA75382.1| putative exported protein [Pseudomonas fluorescens Pf0-1] Length = 489 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 38/445 (8%) Query: 3 ILRAIFSLFI--VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWES 55 ILR+ +L + ++LAGC L G S N + + WW S Sbjct: 5 ILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSDWWTS 64 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLK 113 D L+ L++ AL+ + + A R + A + A+ +P+ + A IS + Sbjct: 65 LGDPQLDGLIREALKDSPDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRLAR-D 123 Query: 114 TNSTGQLDS-----------DWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 + GQ + ++ DL+G QR E++L +A A+L + + + Sbjct: 124 QDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLAADVA 183 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y D +A++ L K+ ++LS + + G S+ + ++ S E+ + Sbjct: 184 RAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEASLID 243 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF-QPNLYIPINIGIP----ADLIRNRP 276 EK R+N I+ + L + N +P + + +P A+L+ RP Sbjct: 244 AEK--RLNSAKIALAV------LLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRP 295 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLP 333 D+ ++ + I AK+ YP+L+L+ G+ +L D F + ++ P + +P Sbjct: 296 DLVAARWRVEAASKDIDSAKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTISVP 355 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++++N+ ++ + ++++ A+ +V + + + + + + QHA E+ Sbjct: 356 IFDGGRLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATEIA 415 Query: 394 KKSMSLSMINYRQGRYSLLDILDIE 418 + S + + Y G + LD+L IE Sbjct: 416 QDSYNTVVQRYGSGIGNYLDVLSIE 440 >gi|320325798|gb|EFW81859.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320327284|gb|EFW83298.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 493 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/479 (19%), Positives = 203/479 (42%), Gaps = 41/479 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSLLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKL 154 P ++ L + +DL+G+ R+ +S LD A+ A+ A+L Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHVSAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIQLSLEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKMPS--ALPAELLGR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G++++ + +A ++ + + +T++ A+K + + L K + Sbjct: 357 ISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAES 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 417 VASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|331008967|gb|EGH89023.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 489 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/479 (19%), Positives = 203/479 (42%), Gaps = 41/479 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSFLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKL 154 P ++ L + +DL+G+ R+ +S LD A+ A+ A+L Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHMSAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIQLALEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKMPS--ALPAELLGR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G++++ + +A ++ + + +T++ A+K + + L K + Sbjct: 357 ISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAES 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 417 VASTQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|260778947|ref|ZP_05887839.1| rND efflux system lipoprotein NodT family [Vibrio coralliilyticus ATCC BAA-450] gi|260605111|gb|EEX31406.1| rND efflux system lipoprotein NodT family [Vibrio coralliilyticus ATCC BAA-450] Length = 463 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 9/360 (2%) Query: 94 ADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI-- 151 AD P++ AS + + + N TG++ W++DL+ Q+ S A D A +Q + Sbjct: 106 ADQLPTANASFTGQSKEDTDDNYTGEVTVSWELDLW-QKLADSSEAARKDVAASQASLQS 164 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AK + + ++ ++++ ++ + I + LD+ + N L ++ G S L + Sbjct: 165 AKDLLAANIMRNWLEISVNQQLLDIELRRLDVLENNEVLVLERYQVGLGSLEDLDNAKTS 224 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 S S + E++ + ++ L G E Q + P + P++ + Sbjct: 225 TASTRSTVAEYEENLEQSRRSLQLLTGQWQPEL---QQPEVAMTFPQVVNPLD-SLAQQN 280 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPK 329 + RPD++ + + A + PS SL S+ + T WS + Sbjct: 281 MAGRPDLQQAFYNIEAEALRTDAAYKAMLPSFSLTASLTDIAQSPSEALLTDPLWSLLGQ 340 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L P+F GK+KS A+ + ++ Y +QET+L AI EVENA+ ++ L A Sbjct: 341 LSAPLFQGGKLKSQAEIAQLTTEQSYWAYQETLLTAINEVENAVGQEYSLEQQQLHLNQA 400 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 K+S YR+G + ++L +++ T E L A Q + +DL +A+G G Sbjct: 401 FTSSKRSFVSYEEKYRKGLVDIFNLLSVQQQTYDTEAQLVNATYQRLLNRIDLGLALGLG 460 >gi|157371977|ref|YP_001479966.1| RND efflux system outer membrane lipoprotein [Serratia proteamaculans 568] gi|157323741|gb|ABV42838.1| RND efflux system, outer membrane lipoprotein, NodT family [Serratia proteamaculans 568] Length = 483 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/395 (24%), Positives = 178/395 (45%), Gaps = 44/395 (11%) Query: 12 IVLLAGCTVGPEYTKPHMPLL-PTQFSIGNSK-NLINIDTLKWWESFNDTSLNKLVKIAL 69 ++LLAGC + P L+ P + K + +N+ +WW S ND L+ L+ L Sbjct: 15 VLLLAGC-ASTDNIAPQSTLMDPQSLQLSQPKVSSLNVSP-QWWRSLNDPQLDSLMTQTL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIP---NL-----------K 113 Q + T+ QA R+ A+ + A P+ AS + + +P N+ Sbjct: 73 QSSPTLRQAAGRVREAQSVMGEASAANGPNLDLNASSNRQKVPQNVNMGLGYPHKPIYES 132 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 +NS G L+ ++ D +G+ R + ++ A +D+A A+ + A L + S + +Y + Sbjct: 133 SNSLG-LNLAYEFDWWGKYRNQVNAAKAQVDAARAEQEQAALTLTSSVASAYFQLQSNFA 191 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + Q +D ++ +L ++ G T + +A+ + I L+ H Sbjct: 192 LEKLLQQEVDNNQRLTDLRQQQYKAGITGVDVPQQSQAQADGAKQQILQLQSQIEQLRHQ 251 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-----ADLIRNRPDIRYQEKKLAD 287 ++ L G + H +P N+ P ADL+ RPDI Q + + Sbjct: 252 LAALAGQGPSAMQH--------LRPVALPASNLMAPKGELTADLLGKRPDIAAQRQLVES 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNS-------FPGYNTHWSFGPKLYLPIFDKGKI 340 ++ A+ + YPSL+++ LT N+ F + W+ P + LPIF G + Sbjct: 304 YNQRVSAARKEFYPSLTISAFAGLTTTNTSGTSPNLFEAASQAWNVMPAISLPIFHAGAL 363 Query: 341 KSNIRRAESSAQEQYI-TWQETVLNAIKEVENALT 374 +S + ES+ +Q + ++ +T+LNA++E +A+T Sbjct: 364 RSKLGE-ESALYDQAVESYNQTILNAVQETADAIT 397 >gi|330887759|gb|EGH20420.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 493 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/479 (19%), Positives = 203/479 (42%), Gaps = 41/479 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSFLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKL 154 P ++ L + +DL+G+ R+ +S LD A+ A+ A+L Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERN--ASEQALDLAHVSAAEQRQAQL 179 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 180 ELQENVVRAYIRLSLEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPE 239 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ Sbjct: 240 AHRQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKLPS--ALPAELLGR 296 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPK 329 RPD+ ++A I +A + YP++ L GS++ G + GP Sbjct: 297 RPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPA 356 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPIFD G++++ + +A ++ + + +T++ A+K + + L K + Sbjct: 357 ISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAES 416 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 V +K+ +++I +++G L++L+ + + + +Y L +A+G Sbjct: 417 VASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 475 >gi|833173|gb|AAA74438.1| outer membrane protein [Pseudomonas aeruginosa] Length = 296 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 36/300 (12%) Query: 5 RAIFSLFI--VLLAGCTVGPEYTKPHMPLL---PTQFSIGNSKNLINIDT--LKWWESFN 57 R+ SL + V+L+GC++ P+Y +P P+ P + G + + + W E F Sbjct: 3 RSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFR 62 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKT 114 D L +L+ +AL+ N + A + A + RADLFP + R +L T Sbjct: 63 DPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLST 122 Query: 115 NSTGQLDSD---------WKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPS 163 + + S W++DLFG+ R + L + AQ A+ +++ + + Sbjct: 123 TGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRS-AQTTLVASVATA 181 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+ + + ++ + L Y+K+ +L+ + G S L L + + ++E TL Sbjct: 182 YLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQ---TAVEGARATLA 238 Query: 224 KSFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + R+ + + L+ G PA Q L + G+P+DL++ RPDI Sbjct: 239 QYTRLVAQDQNALVLLLGSGIPANL------PQGLGLDQTLLTEVPAGLPSDLLQRRPDI 292 >gi|291286701|ref|YP_003503517.1| RND efflux system, outer membrane lipoprotein, NodT family [Denitrovibrio acetiphilus DSM 12809] gi|290883861|gb|ADD67561.1| RND efflux system, outer membrane lipoprotein, NodT family [Denitrovibrio acetiphilus DSM 12809] Length = 479 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 107/473 (22%), Positives = 201/473 (42%), Gaps = 38/473 (8%) Query: 1 MNILRAIFSLFIVL-LAGCTVGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWE 54 + R + F++ LAGC G + L P FS + + + KWWE Sbjct: 3 LRYCRLVLVFFVLAALAGC-AGTTHRVSKSKLDEEIKYPDAFSFSGTGAVYDG---KWWE 58 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 F + LN L++ L+ N I + E + A + + AD PS +S Sbjct: 59 VFGISELNILMEQMLENNKEIAGSYEGLKALQAALGISTADRMPS----LSLETSAGDTY 114 Query: 115 NSTG-----------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 ++TG L + +++D++G+ R +ES L S + + + ++ Sbjct: 115 STTGGSREWRDSYDISLTASYEVDIWGRIRSAVESDRMALLSGRFDTESLYMTLTAEFAD 174 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + + + +IL L +K +++ + +T G S S+ + I + DI Sbjct: 175 RYFLYKSLASVLKMQEEILTLRQKQVKVLEMTYTSGIGSLDSIYTKQTTIAVLLEDISET 234 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQ 281 ++S + ++ LLG + K S+++ NL IP + IP ++ RPDIR Sbjct: 235 KQSMLEAKYQMALLLGEADAGSV----KISDSY--NLAIPDLPEIIPGNIAEKRPDIRSA 288 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL----PIFDK 337 + + + A ++ YP LS + S + D T +F KL PIFD Sbjct: 289 YASVLQINSDVAQAMANRYPKLSFSASAGYSGDE-ISSLITPENFVTKLIANLTAPIFDA 347 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +K+ R E +++ + + VL +KEV ++L ++++ + Q V + + + Sbjct: 348 GNLKNQQLRQEYLLKQEIQNYYQAVLEGLKEVSDSLADNMQNEQALKLSQKKVGIEENRL 407 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ + Y+ G +LD + + + A+R L S V+L A G + Sbjct: 408 RIAEMKYKSGIEDYSTVLDNKISLLSGWITEVNARRSLISSRVELARASGGSW 460 >gi|326386896|ref|ZP_08208510.1| heavy metal cation tricomponent efflux outer membrane porin ZneC [Novosphingobium nitrogenifigens DSM 19370] gi|326208576|gb|EGD59379.1| heavy metal cation tricomponent efflux outer membrane porin ZneC [Novosphingobium nitrogenifigens DSM 19370] Length = 492 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 101/425 (23%), Positives = 178/425 (41%), Gaps = 37/425 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHR 107 +WW F +++ LV AL N I QA + +++ + R LFP + Y+ R Sbjct: 70 QWWHRFGSKAMDDLVTRALAANTDIAQAEAALRQSRDLAGAARGVLFPQIDAGYSYERQR 129 Query: 108 FIPNLKTN-----------STGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLN 155 NL T T Q+ + +DLFG R ++ S+ A +A A+ ++ Sbjct: 130 LSRNLSTPLADPNPQVFSIHTAQVSVSYTLDLFGLNRANLRSAQAAARAAEAKAQAMRVM 189 Query: 156 VISKLIPSYI-----DARHFKERISIAH--QILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V+ ++ I +A+ R SIA ++LDL ++ + GA K + Sbjct: 190 VVGNVLLGVIQNAGLEAQAEAARASIAENREVLDLLRR-------RQAYGAVGKADVAAQ 242 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI 267 EA + + E +P +EK+ N+ ++ L+G P + S +L P+ + Sbjct: 243 EAALAAAEGALPPIEKARADNLAALAVLIGVAPGSPLPELPALDSIALPADL--PLTL-- 298 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 PA+L+R RPD+ L + A + A + P ++L+ G A F N W Sbjct: 299 PAELVRQRPDVAAAAGALDVAAANVRAAIAARLPQITLSASAGGNATDFAQMFANGNPFW 358 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + + PIF G + R A + + ++ T L A +V NALT+++ D + + Sbjct: 359 AAIGAISTPIFHGGTLLKQQRAARDALEGAKAAYKGTALQAFADVSNALTALSTDAEALD 418 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + + S+ + G +L+ A + V A+ Q V L+ Sbjct: 419 AAKRGHDAANVSLEFTRKQLELGSVGTFAVLNATAAADQARVQYVQARSQRLSDTVGLFT 478 Query: 445 AIGSG 449 A+G G Sbjct: 479 ALGGG 483 >gi|260495446|ref|ZP_05815572.1| outer membrane efflux protein [Fusobacterium sp. 3_1_33] gi|260196983|gb|EEW94504.1| outer membrane efflux protein [Fusobacterium sp. 3_1_33] Length = 452 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/330 (20%), Positives = 167/330 (50%), Gaps = 15/330 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRF 108 +WW+ +N++ LN ++ IAL+ N + +A +N A + N+L ADL PS +S+ Sbjct: 47 EWWKEYNNSELNNIMNIALKNNSDLKKAAINVNKALYQANLLG--ADLVPSFSSSLGSSA 104 Query: 109 IPNLKTNSTGQLDS------DWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLI 161 N+KT + + +++IDL+ + + +++ + ++ AKL++I+ ++ Sbjct: 105 SKNIKTGGSSAIKHSASISLNYEIDLWRKLSNAKNAQEWEYQATTEDLEAAKLSLINNVV 164 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + + ISI + ++ Y+K + K+ G S+L ++ E + ++++ + T Sbjct: 165 NTYFNIVYLNDAISILNDKIEQYEKINTVMKNKYQYGVNSELEYLQSEQSLTNLKNTLLT 224 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + LL E + K +F+ I +N+ +P +I NRPD++ Sbjct: 225 YQNEKTEQEQTLRDLLNLKPEENIEIKTKNLLSFKD---IGVNLDVPISVIANRPDVKAY 281 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKI 340 E +L+ + + ++ LYPS+++ +++ + + + + LP + + Sbjct: 282 EYRLSKAFKDVKATQAKLYPSVTIQSTLSSSGNKVDNALSVPIGLASINISLPFLNWNTL 341 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVE 370 K NI+ E+S + + +++++++++ E++ Sbjct: 342 KWNIKIDEASYENAKVDFEKSIVSSLNEID 371 >gi|56708320|ref|YP_170216.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670791|ref|YP_667348.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis FSC198] gi|134301726|ref|YP_001121694.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis WY96-3418] gi|187931798|ref|YP_001891783.1| outer membrane efflux protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457440|ref|ZP_03665913.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254369083|ref|ZP_04985095.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica FSC022] gi|254370803|ref|ZP_04986808.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875140|ref|ZP_05247850.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604812|emb|CAG45891.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321124|emb|CAL09274.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis FSC198] gi|134049503|gb|ABO46574.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569046|gb|EDN34700.1| hypothetical protein FTBG_00613 [Francisella tularensis subsp. tularensis FSC033] gi|157122033|gb|EDO66173.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica FSC022] gi|187712707|gb|ACD31004.1| outer membrane efflux protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841139|gb|EET19575.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159551|gb|ADA78942.1| outer membrane efflux protein [Francisella tularensis subsp. tularensis NE061598] Length = 490 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 118/484 (24%), Positives = 212/484 (43%), Gaps = 57/484 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ S ++ + PEY +P + P L +I +KN ++ + WW FND L Sbjct: 10 ALISATLITSSCSFFSPEYERPKIKAPALWNNQDKNIEVTKNW-DLTKVAWWREFNDPVL 68 Query: 62 NKLVKIALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SHRFIP 110 N L+ AL+ N ILQA IN A L SV F + + S+ IP Sbjct: 69 NNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIP 128 Query: 111 ---NLKTNST-GQLDS---DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N+ T +T G L + I++ Q + E S + D +L++IS++ + Sbjct: 129 QLNNIGTQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLSIISQVSAA 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL--SLVKLEAEIKS-----IE 216 Y KE++ + +++ + + + GATS + +++ + E++ I+ Sbjct: 189 YFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQKGKIAMIK 248 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +DI + + ++ L+G + + + N N+ +PIN+ P+ ++ NRP Sbjct: 249 NDIVHFQNTLKI-------LMGRNPGKIV--TSRTLNEINANIKVPINM--PSQVLENRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGP 328 DI E KL + A IG+A+S +PS+ L G+ L N++ + P Sbjct: 298 DIGIAEYKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVP 357 Query: 329 KLYLPIF-DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L I D K K+ +A Y + T+ A ++V+++L+ + K + K Sbjct: 358 VFNLSILADSDKAKAQFYQA-------YYDYINTLQQAFQDVDDSLSERAANAKNLKKQT 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++E ++ + Y G S I ++ ++ AK + S V+LY A+G Sbjct: 411 ISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQAKLKSLISVVNLYQALG 470 Query: 448 SGYN 451 SGYN Sbjct: 471 SGYN 474 >gi|330980686|gb|EGH78789.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 427 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/427 (20%), Positives = 192/427 (44%), Gaps = 30/427 (7%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +LL+ C T P P P ++ + D ++WW F LN+L++ A + Sbjct: 11 CLLLSACQTPAPPLGSGIQP--PASWAFAENAAAQRSD-VRWWRQFGSPQLNRLIEQASR 67 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLK-----------TNS 116 + + A R+ A+ + + A L P + ++F+ N N Sbjct: 68 DSHEVAAAMARVRQAQASAIIGGAPLLPELAFDVRGEHNKFVRNSDRKANPSDDNNTNNF 127 Query: 117 TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T L + +++D +G +S+L L ++ +L +++ + Y +E+ Sbjct: 128 TSDLTASYEVDFWGGIAAGRDSALQGLRASQFDQATVELTLLANVADRYAQTLAAREQGR 187 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 IA L + + L ++ G+ + L L + + + + + ++P +++ + +S Sbjct: 188 IAELNLTNAQDVLRLVQTRYESGSATALELAQQKNLVATQQRELPRVQQLANEQLITLSA 247 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG P + LH + + + I G+P++L+ RPD+ E +LA + A + +A Sbjct: 248 LLGQP-VQNLHLADQPFDTLN---WPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVA 303 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 ++ + P L+L+ + + + + S L PIF+ G++ + +A + +E Sbjct: 304 RAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATARQEEL 363 Query: 355 YITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSL 411 T++ ++N+ +VE AL SI+ D++ + H EL + + ++ Y++G L Sbjct: 364 LETYRGAIINSFADVEKALNSIHGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAEDL 420 Query: 412 LDILDIE 418 L +L+ + Sbjct: 421 LTVLETQ 427 >gi|330970060|gb|EGH70126.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 390 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/358 (23%), Positives = 164/358 (45%), Gaps = 22/358 (6%) Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFG-----QRRHIESSLANLDSAYAQVDIAKLNV 156 +SISH + L +S +++D+FG Q +E LA ++ + ++++ Sbjct: 46 SSISHEYSAQLGLSS-------YELDVFGRIQNLQDEALEDYLALTETRRS----TQISL 94 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+++ ++ + + +A L +K+ EL+ G +S L + + + ++S Sbjct: 95 IAEVATGWLTLAADNQLLKLAEDTLASQQKSYELTRSSHALGGSSGLEVAQAQTTVESAR 154 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 D+ + + + + L+G E L + Q + + G+P+ L++ RP Sbjct: 155 GDVAQYKSQILQDRNALRLLVGSDLPEELLPNADMQSVAQ---LVQVPDGLPSSLLQRRP 211 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLP 333 D+ E L + IG A++ +PS++L S + + F WSF P + +P Sbjct: 212 DVLSAEHTLKAANIDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVP 271 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G ++ + A+ Q Q T+Q+T+ A KEV +AL + + + Q + Sbjct: 272 IFDGGANRATLDSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDAS 331 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++S L+ YR G S L+ L+ +R+ E DL + + V LY +G G+N Sbjct: 332 RRSYELADALYRGGSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 389 >gi|315296127|gb|EFU55436.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 16-3] Length = 488 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/477 (19%), Positives = 202/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + IPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTDIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 IRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|149197876|ref|ZP_01874925.1| hypothetical protein LNTAR_05296 [Lentisphaera araneosa HTCC2155] gi|149139097|gb|EDM27501.1| hypothetical protein LNTAR_05296 [Lentisphaera araneosa HTCC2155] Length = 475 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 104/466 (22%), Positives = 208/466 (44%), Gaps = 34/466 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 I LF+V C E H P + P F+ + L+ + KWW+ D LN+ Sbjct: 7 IICLFLV---ACQ-NIEREAKHRPAIDSPKTFTSESDSPLLE-SSEKWWQELGDDELNQF 61 Query: 65 VKIALQQNLTILQATERINAAKENILSVRA----DLFPSSYASISHRFI---PNLKTNST 117 + NL + Q+ R+ A+ + R+ L + A + R I PN + Sbjct: 62 MDKVFNDNLDLAQSWARLRQAEARLGISRSAKKLKLNADANAEGNKRKIDTNPNEDKQTF 121 Query: 118 GQ------LDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARH 169 G L + +++DL+ R E++ A +D + AQV L + ++++ S++ + Sbjct: 122 GAERYSIGLKATYEVDLWD-RISDENAAAAMDYEAQKAQVQGTALLLSAEVVESWVTYKA 180 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE--KSFR 227 E++++ + ++ + L + +G + + L + ++ ++S IP LE K+ Sbjct: 181 IVEQLALLDNQIKTNEQTLRLISYRQKRGLANIVDLFQQRQQVARVKSLIPKLEERKADL 240 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + + + A L ++ P+L + GIPA+++ RPD+ L Sbjct: 241 RLKLLLLSGENFDAKIDLGELKL------PHLNEIPSTGIPAEILAQRPDVNQSWLLLQS 294 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--SFGPKLYLPIFDKGKIKSNIR 345 S +I A P L+L+ A ++ F +W + L PI D +++ Sbjct: 295 SEFRISSANKAKLPRLTLSAQ-ANFNNQKFSRVFDNWFSNIVAGLTAPILDGQLLENEKL 353 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ + E Y+ ++ET LNA+ EVE AL++ + + +Q VE K ++ +M YR Sbjct: 354 LAKAKSDENYLYYKETALNALNEVEQALSAEKWRRVQINSVQTEVEYSKNTLDETMRRYR 413 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G L +L + + L+ + +L + ++L+ ++G ++ Sbjct: 414 RGLSDYLPVLTALATHQQAQRTLTEVRTELIVNRIELHRSLGGSWD 459 >gi|330950993|gb|EGH51253.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 498 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/478 (18%), Positives = 207/478 (43%), Gaps = 39/478 (8%) Query: 3 ILRAIFSL----FIVLLAGC----TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWE 54 I+R ++ + F ++L GC + P+ T H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGCIGTHGIKPQGTVLHADSLATDQAIQSAALDAHWPAAQWWR 64 Query: 55 SFNDTSLNKLVKIALQQNLTIL-------------QATERINAAK--ENILSVRADLFPS 99 ++ D L+ V +A + ++ Q E A + N +R D +P Sbjct: 65 AYGDAQLDHWVDMATLGSPSLALAAARVRQARAMAQVAESAEAVQLQGNASLMRHD-WPE 123 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNVIS 158 ++ L + +DL+G+ R+ +L + A+ A+L + Sbjct: 124 DQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLELQE 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 184 NVVRAYIQLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPEAHRQ 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 I L+++ + + ++ L G + +Q+ + + +L +P + PA+L+ RPD+ Sbjct: 244 IDALQEAIALGRNQLAALAGKGPGQGA-ALQRPALSLHTSLTLPSTL--PAELLGQRPDV 300 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLP 333 ++A I +A + YP++ L GS++ G + GP + LP Sbjct: 301 VAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAISLP 360 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAV 390 IFD G++++ + +A ++ + + +T++ A+K V + L S+++ + + + +V Sbjct: 361 IFDAGRLRAELGQASAAYDQAVAHYNQTLVMALKSVSDQLIRRASMDKQQALAAE---SV 417 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 418 ASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLEAYAGLVVALGG 475 >gi|239995343|ref|ZP_04715867.1| RND efflux system outer membrane lipoprotein [Alteromonas macleodii ATCC 27126] Length = 484 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 161/332 (48%), Gaps = 13/332 (3%) Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQIL 181 W++DL+ Q+ S ANLD+A A+ A+ ++++ ++ SYID ++ ++I L Sbjct: 157 WELDLW-QKISDGISAANLDAASARASYQSARDSLVANVVRSYIDVLTQQQLLNIEQSRL 215 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + N + +++ G S L + + I E + ++ LLG Sbjct: 216 TVLENNEAVILKRYSTGLGSLDDLDTARTSSANTRATIAQYENALLTAKRTLAVLLGRQ- 274 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + L+ + Q + F P++ +P+ DL R RPD++ L + ++ +A L P Sbjct: 275 NQSLNELNTQVS-F-PDVLLPLTTLPKQDLAR-RPDLQAAFYALKATEFEVDVAYKALLP 331 Query: 302 SLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 S+SL+ S L+ + S P N WS ++ P+F G +++ + A+ ++ + Sbjct: 332 SISLSAS--LSDNASTPSQALFTNPLWSLLGQMTAPLFQGGALRAQVEDAKLTSANAWWQ 389 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ET+L A++E +NAL S ++ + A+ ++S+S YRQG +LD+L + Sbjct: 390 YRETLLTAVQETQNALDSETALSARISHINVALANAERSVSTIEGQYRQGLADILDLLSV 449 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 ++ Q ++ +DL +A+G G Sbjct: 450 YDTRFNLQAQAVELHAQKLQNRIDLGLALGLG 481 >gi|285019917|ref|YP_003377628.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283475135|emb|CBA17634.1| probable outer membrane efflux protein [Xanthomonas albilineans] Length = 484 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 109/461 (23%), Positives = 205/461 (44%), Gaps = 40/461 (8%) Query: 18 CTVGPEYTKPHMPL--------LPTQ-----FSIGNSKNLINIDTL--KWWESFNDTSLN 62 C VGP++ +P +P LP Q G +++L+ + + +WW +F +L+ Sbjct: 19 CRVGPDFVRPPVPPVDRYTAAPLPPQTVAAADPAGAAQHLLQGEAVPARWWSAFASPALD 78 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG---- 118 LV ALQ N + A + AA E + L P+ +S P + + G Sbjct: 79 MLVDEALQANPDLQAADAALRAANETAAAQLGSLIPAVDLQVS----PQRQRQAGGSPYT 134 Query: 119 ----QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 Q++ + +D+FG RR E A D Q A +++ S ++ S I + + Sbjct: 135 LHTAQVNVSYVLDVFGGNRRQHEVLAAQADVQRFQRQAAYMSLTSNVVASAIQEAGLRAQ 194 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I A + L ++ L ++ G S + L +A + ++ +P L++ + Sbjct: 195 IDAAQAQIALAQRLRTLLERQYAAGQASGVDLAAQDAALAQAQTVLPPLQQQLAQQRARL 254 Query: 234 STLLGYPATEFLHYMQKQSNNFQ-PNLYIP--INIGIPADLIRNRPDIRYQEKKLADSVA 290 + L G P +E + + F +L++P + + +PA ++ R D+ + +L + A Sbjct: 255 ALLAGRPPSEDI------AQRFALGSLHLPTALPLSVPAQVLARRADVAAAQAQLHAACA 308 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +IG+A + PSLSL+G+I + F N W G +L P+F G ++ R A Sbjct: 309 QIGVATAARLPSLSLSGNIGSSAAQVRQLFERTNAQWLLGGELIAPLFHGGSLRHQQRAA 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + ++ VL A+++ N L ++ D + + A +S++L+ + G Sbjct: 369 VAAYDQAQAQYRSVVLAALQDTANTLQALLSDAQTLQAAVAARTAAARSLALAQRQHVLG 428 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 S L +L E+ + V L A+ Q V L+ A+G Sbjct: 429 AGSGLQLLQAEQVEQQAVVALVQAQTQRYADTVALFQALGG 469 >gi|209967285|ref|YP_002300200.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum centenum SW] gi|209960751|gb|ACJ01388.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodospirillum centenum SW] Length = 476 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 101/473 (21%), Positives = 203/473 (42%), Gaps = 41/473 (8%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVK 66 +L LAGC P+ P P S + D WW + D L++L++ Sbjct: 15 ALCSFALAGCAAVPDLGAPPAPRDAATLDSARSLSAPAADWPGRVWWAQYGDPQLSRLME 74 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLK 113 A+ + A R+ +A+ A L PS+ A S + IP Sbjct: 75 EAVAAAPDLAAAAARLRSAEALAEQAGAALLPSATADASVSEAKQSYNTGAPPQAIPR-G 133 Query: 114 TNSTGQLDSDWKIDL-FGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHF 170 N +G+ IDL F R + A ++ A+V++ A+L + +++ +Y D Sbjct: 134 WNDSGKAGLSVGIDLDFWGRNRAALAAATSEAEAARVELEAARLALTTEIAAAYADLAQL 193 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +A + + ++ L + + G ++ + + + + + +++ +++S + Sbjct: 194 HADRDVAASAVRIRSDSLRLVEDRLSNGLENRAAARQAASAVPAARAELAAIDESIALTR 253 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + I+ LLG L + + + +P + P DL+ RPDI + + + Sbjct: 254 NRIAALLGAGPDRGLAIERPEIARLH-AVGLPGRL--PLDLVGRRPDIVAARLRAEAAAS 310 Query: 291 KIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +I +A++ YP ++L G +L N +++ S GP L LP+F+ G++ R+A Sbjct: 311 RIAVARAAFYPDVNLTALIGVQSLGLSNLTESGSSYGSVGPALSLPVFEGGRLSGGYRQA 370 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + T+ A++EV +A TS + + + A+E + + +++ Y G Sbjct: 371 RAGYDAAVAEYDATLTRALREVADAATSQTALATRLREARAALEESEAAYAIARQRYEGG 430 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQL-----AKSY---VDLYIAIGSGYNP 452 + LD+L E I++R+L A+++ V L A+G G++P Sbjct: 431 LSTYLDVLSTEEGL--------ISRRRLVADLEARAFTLDVALVRALGGGFSP 475 >gi|118497862|ref|YP_898912.1| outer membrane efflux protein [Francisella tularensis subsp. novicida U112] gi|194323835|ref|ZP_03057611.1| outer membrane efflux protein [Francisella tularensis subsp. novicida FTE] gi|208779927|ref|ZP_03247271.1| outer membrane efflux protein [Francisella novicida FTG] gi|254373217|ref|ZP_04988706.1| outer membrane efflux protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374672|ref|ZP_04990153.1| outer membrane efflux protein [Francisella novicida GA99-3548] gi|118423768|gb|ABK90158.1| outer membrane efflux protein [Francisella novicida U112] gi|151570944|gb|EDN36598.1| outer membrane efflux protein [Francisella novicida GA99-3549] gi|151572391|gb|EDN38045.1| outer membrane efflux protein [Francisella novicida GA99-3548] gi|194322199|gb|EDX19681.1| outer membrane efflux protein [Francisella tularensis subsp. novicida FTE] gi|208744382|gb|EDZ90682.1| outer membrane efflux protein [Francisella novicida FTG] gi|332678577|gb|AEE87706.1| Outer membrane component of tripartite multidrug resistance system [Francisella cf. novicida Fx1] Length = 490 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 118/484 (24%), Positives = 212/484 (43%), Gaps = 57/484 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ S ++ + PEY +P + P L +I +KN ++ + WW FND L Sbjct: 10 ALISATLITSSCSFFSPEYERPKVKAPALWNNQDKNIEVTKNW-DLTKVAWWREFNDPVL 68 Query: 62 NKLVKIALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SHRFIP 110 N L+ AL+ N ILQA IN A L SV F + + S+ IP Sbjct: 69 NNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIP 128 Query: 111 ---NLKTNST-GQLDS---DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N+ T +T G L + I++ Q + E S + D +L++IS++ + Sbjct: 129 QLNNIGTQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLSIISQVSAA 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL--SLVKLEAEIKS-----IE 216 Y KE++ + +++ + + + GATS + +++ + E++ I+ Sbjct: 189 YFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQKGKIAMIK 248 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +DI + + ++ L+G + + + N N+ +PIN+ P+ ++ NRP Sbjct: 249 NDIVHFQNTLKI-------LMGRNPGKIV--TSRTLNEINANIKVPINM--PSQVLENRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGP 328 DI E KL + A IG+A+S +PS+ L G+ L N++ + P Sbjct: 298 DIGIAEYKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVP 357 Query: 329 KLYLPIF-DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L I D K K+ +A Y + T+ A ++V+++L+ + K + K Sbjct: 358 VFNLSILADSDKAKAQFYQA-------YYDYINTLQQAFQDVDDSLSERAANAKNLKKQT 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++E ++ + Y G S I ++ ++ AK + S V+LY A+G Sbjct: 411 ISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQAKLKSLISVVNLYQALG 470 Query: 448 SGYN 451 SGYN Sbjct: 471 SGYN 474 >gi|330991775|ref|ZP_08315725.1| Solvent efflux pump outer membrane protein srpC [Gluconacetobacter sp. SXCC-1] gi|329761243|gb|EGG77737.1| Solvent efflux pump outer membrane protein srpC [Gluconacetobacter sp. SXCC-1] Length = 443 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/443 (19%), Positives = 185/443 (41%), Gaps = 27/443 (6%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 MP Q G + + D +WWE+++D +L + V AL + I A +R+ A+ Sbjct: 1 MPGRFVQQQAGPATAVPATDLTRWWEAWHDPALTRAVDTALAASPDIRMARDRVREARAL 60 Query: 89 ILSVRADLFPSSYAS-------ISHRFIPNLKTNSTG------QLDSDWKIDLFGQRR-H 134 ++ L+P+ A+ + R +L N G + + W+ DLFG R Sbjct: 61 HAVAKSALYPTVGATGNMLGGGMDWRNPYSLPANDPGTDGHLAGITASWEPDLFGGRHAD 120 Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 ++++ A + + ++ + + +Y+ A+ + +I++ + + L + + Sbjct: 121 VKAAKAGVRAEEEYFHGVQMVIAADAASNYLQAQGLQRQIALTDRSIALLVQLRGYGQAR 180 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 FT G + + +++ ++ + + P + ++ L G E L + Sbjct: 181 FTSGQATAADVTEIDQKLSDLRARRPMQVAGLDLVRRRLAVLSGQ-VPEGLPDLPPPPAY 239 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALT 312 + P + +P ++ RPDIR + ++ ++ ++ AK+DL P L G Sbjct: 240 YLPPAPVGQ---MPDTVLERRPDIRARRDQVDAALNRLKSAKTDLLPRFGLEFFGGDGRL 296 Query: 313 HDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + PG T YLPIF ++++ I A + + +++L A+ EVE+ Sbjct: 297 RFDGIPGMSGTGGLIALTTYLPIFTANRVQARIHAASARLDAAVAGYDQSLLRALAEVED 356 Query: 372 ALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 S++ K +T+ Q E + M+ Y G+ +L D+L A + + Sbjct: 357 GYENRLSLDSRDKDLTRAQVQAERVARDMAGL---YAGGQRTLGDVLRARMAALDAQGSV 413 Query: 429 SIAKRQLAKSYVDLYIAIGSGYN 451 + + + L A+G G+ Sbjct: 414 LANQDTRTTATIQLARALGGGWE 436 >gi|319779508|ref|YP_004130421.1| Outer membrane component of tripartite multidrug resistance system [Taylorella equigenitalis MCE9] gi|317109532|gb|ADU92278.1| Outer membrane component of tripartite multidrug resistance system [Taylorella equigenitalis MCE9] Length = 478 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 109/463 (23%), Positives = 206/463 (44%), Gaps = 81/463 (17%) Query: 41 SKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS- 99 +K ++++D KWWE +ND L L++ L++N I A ++ ++ N AD+ P+ Sbjct: 44 AKAIVSLD--KWWEDWNDPILTTLIEEGLRENFDIAIAKAKLLESRANANLANADMGPTF 101 Query: 100 --------SYASISHRFIPNLK---------------TNSTGQLDSDWKIDLFGQRRHIE 136 S+S+ P L T G + S W+ D FG + + Sbjct: 102 GLTANGGFHSTSVSNPIEPALSKVGFNVSDDFQTTGLTGFAGAVAS-WEPDFFGSK--LS 158 Query: 137 SSLANLDSAYAQ---VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + A A AQ V A L S++ +Y+ R+++++I A + L ++ Sbjct: 159 DAKAAEYGASAQEEGVHGASLLTSSEIALNYLYYRYYQKKIFYAQRTLSYMQEMRRYLKG 218 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL-------- 245 ++ G + L+++I + ++ TL ++ I+ LLG F Sbjct: 219 RYDVGHVGIELVTDLDSKILAHKARTKTLPAQRDKHLRAIAVLLGKKPQGFTISNSNRDL 278 Query: 246 --HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 H Q S + P +I RPD+R + +++ AK+DLYP + Sbjct: 279 FEHIPQAPSGQY------------PISVIERRPDLRAALLNINARASQVASAKADLYPRV 326 Query: 304 SL-----NGSIALTHD-----NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 + NG + + D ++F G F + +PIF G+I+ NI ++ ++ Sbjct: 327 KINFLGHNGVVEINSDYLANPSAFGGL-----FNVGISIPIFTNGRIQRNIEVKDAKLKQ 381 Query: 354 QYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 I + + VL ++ EV++ A +INE +++ V +KK+ L+ + Y+ G + Sbjct: 382 AVIEYDQKVLKSLSEVDSVYQAQFAINEQNNLLS--SSLVVQNKKTRQLNQM-YKLGNKT 438 Query: 411 LLDIL--DIERATAKVEV-DLSIAKRQLAKSYVDLYIAIGSGY 450 L D+L IE + K ++ + S+A+ A++ + LY A+G G+ Sbjct: 439 LDDVLKSKIEASEFKDKILESSLAE---AENLIRLYKALGGGW 478 >gi|51244005|ref|YP_063889.1| hypothetical protein DP0153 [Desulfotalea psychrophila LSv54] gi|50875042|emb|CAG34882.1| hypothetical protein DP0153 [Desulfotalea psychrophila LSv54] Length = 466 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/472 (20%), Positives = 205/472 (43%), Gaps = 70/472 (14%) Query: 18 CTVGPEYTKPHMPLL-PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 C++ P H LL P + I + + I T +WWE F D LN L+++ L+QNL + Sbjct: 22 CSMIPPKEAHHQQLLTPEEIGI---RAEMQIRTCRWWEDFRDPQLNTLIEMGLRQNLNLQ 78 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDS-------------- 122 Q + R++ AK+ +L +A + NLK N G Sbjct: 79 QVSYRLSLAKQQVLLNQA----------GQKVQANLKLNGGGLAAKGDFPSQNSAFALAL 128 Query: 123 ---DWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIA 177 + +D +G+ + + +N + A AQV++ A+L + + SY++ ++ +++ + Sbjct: 129 PMVGYNLDFWGKIENRVLAASNREKA-AQVNVTQARLALAVSIAQSYLNLQNNRQQKQVL 187 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 H+++ K E+ +G L++ ++ + ++ L Sbjct: 188 HRMITNQKAAEEIIVGSVKRGFLPYEELLQSQSYSHLLRAE-----------------LT 230 Query: 238 GYPATEFLH------YMQKQSNNFQP------NLYIPIN--IGIPADLIRNRPDIRYQEK 283 G A E L Y+ + + P L P+ + IP +L+ RPDI+ ++ Sbjct: 231 GAKAQEILAKNQIALYLARTTEQLAPLVDGKLTLIAPLQEVLSIPMNLLARRPDIQGKKW 290 Query: 284 KLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A+I +A++ YP +L G L N P + S LP++D G + Sbjct: 291 IVQAYAAEIKVARTAFYPDFNLMLGGAFLAMTNIHPDKLSLLSGSIATSLPLYDGGLRDA 350 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENA--LTSINEDKKIVTKLQHAVELHKKSMSLS 400 + A + + +++L A++E +A L +++++++T + + E +++ ++ Sbjct: 351 GLSIANIMYDRAVLDYNQSLLGAVREASDAIILLKTSQEQEMLTGI--STEKQRQAYDIA 408 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 Y++G L + E + ++L + +S + L +A+G GY+P Sbjct: 409 RKKYQRGISPYLLMNQAESRWQQTFLNLIKTETATLQSQLRLIMALGGGYSP 460 >gi|255021911|ref|ZP_05293921.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] gi|254968735|gb|EET26287.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] Length = 460 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 105/472 (22%), Positives = 200/472 (42%), Gaps = 54/472 (11%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-------------TLKWWESFNDTS 60 ++ GC PE LP N K+ +++D +WW S ND Sbjct: 1 MVGGCARLPEQ-------LPN-----NPKDQVDLDIPRPTGIAAAPWPAQEWWRSANDPE 48 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF-------IP 110 LN+LV+IA +N + A ++ A+ ++ + R+ L P + +A F Sbjct: 49 LNRLVQIAFARNPDLRAAAAKVLLAQADVGAARSRLLPHFDADFALTQQYFSAQGLHLSA 108 Query: 111 NLKTNSTGQL---DSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N +N+ G L D + +DL+GQ R + ++ L A+ A+L V + ++ Y Sbjct: 109 NGTSNTFGALNPIDIHYHVDLWGQDRDLVRAARGRLAMNQAEAAQARLLVSTAVVVQYFA 168 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + + L ++ ++ F QG + + + + I L+ + Sbjct: 169 LEGDRRLLQQTEHLHTLQEQAKAVAEGGFQQGLFNASQIHAEDLALAESAQRIAKLQAAI 228 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 H ++ L G + + P L +P N +P L+ RPDI + Sbjct: 229 AAEKHALAALCGEGPSMTIGSATITKQALSPALGLPKN--LPLRLLARRPDIVAARWAVQ 286 Query: 287 DSVAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A++G A++ YP+++L SI L D PG H + GP + LPIF+ G ++ Sbjct: 287 AAAAEVGAARAAFYPNINLRLLAGWNSIHLG-DLFNPGNFAH-AVGPVITLPIFEGGALR 344 Query: 342 SNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++R + +AQ++Y + T+L A++++ + L++ + + +HA + Sbjct: 345 AHLRAQNAVFLAAQDRY---RSTLLAALRQIADRLSTAQKLARQERAQRHAAAAAQSQWE 401 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +RQG L + E +V + +++ L A+G GY Sbjct: 402 LRQQAWRQGLSDALPSIAAEITCVQVRQRRTAITTARWQNWALLESALGGGY 453 >gi|307295077|ref|ZP_07574919.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] gi|306879551|gb|EFN10769.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 511 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/409 (21%), Positives = 176/409 (43%), Gaps = 52/409 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------S 99 WW ++ D L+ L++ L+ + + A R A A L P S Sbjct: 66 WWTAYGDPQLDALIQEGLKGSPDVAAAAARFAEANAVAQQSGAPLLPTVDLDANAGATKS 125 Query: 100 SY-ASISHRFIPN--LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKL 154 SY + F+P L G L+ +D++G+ R ++ + + A++D A+L Sbjct: 126 SYNMGMPKEFVPKGWLGMGRVG-LNFGLDLDIWGRNRAALAAATSQ-ARAAEIDARQARL 183 Query: 155 NVISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + + + +Y D AR + ER I + L++ + +L + G ++ S + +A + Sbjct: 184 ALATGVADAYADLARLYDER-DIQGRALEIRAASQKLVADRRANGLETRGSERQADATVS 242 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD--- 270 S ++ + +++ + H I+ L+G L + P L P +G+PAD Sbjct: 243 SAKAQLAAADQAIAVRRHQIAALIGAGPDRGLAIAR-------PRLGKPGPLGLPADVTT 295 Query: 271 -LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPGYN 321 L+ RPDI + + +I +A++D +P++ LN I + F G Sbjct: 296 NLVARRPDIAAALARTEAAARRIKVARADFFPAIRLNALIGVQSLGYQTVLQGAQFAGGP 355 Query: 322 THWS------------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 + ++ GP + LPIF G + R A + + + +TVL A ++V Sbjct: 356 SPFTDTLFKKDSLFGNAGPAISLPIFHGGALSGQYRGARAVYDQAVANYDKTVLGAYQQV 415 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +A+T + + + A+ +++ ++ Y G + LD+L++E Sbjct: 416 ADAVTGRQALDQRLADARAALVASEEAYGIARQRYEGGLNTYLDVLNVE 464 >gi|78059676|ref|YP_366251.1| putative outer membrane efflux protein MdtP [Burkholderia sp. 383] gi|77964226|gb|ABB05607.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 494 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 102/466 (21%), Positives = 196/466 (42%), Gaps = 39/466 (8%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 A C + KP L P + I N +L N + +WW + D L+ LV AL + Sbjct: 26 AACALIHRDVKPSATLDPERIRIANDIHLANDGWPSARWWMRYGDPQLDALVDRALADSP 85 Query: 74 TILQATERINAAKENILSVRAD--LFPSSYASI------SHRFI-------PNLK----- 113 TI A R++ AK ++ V+A L S+ S+ S+ F+ P L Sbjct: 86 TIASAHSRVSQAKADVDLVKAGTSLQVSALGSVNRERVSSNGFLSAYSGNQPMLGASGPW 145 Query: 114 -TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T L + +D++G QR + ++L ++ + +L + + + Y + Sbjct: 146 YTEGVVGLGASLDVDIWGKQRAQVAAALGVHNARVVETSAIELEISADVAQIYYGIQTTY 205 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 I + Q+ D+ ++ + ++G + ++ + E I + Sbjct: 206 HLIDLLEQLHDIVTFSMNAHAARASRGLEPQTQTEIARSQKLATERQIVAARGRIQQLRE 265 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L+G A + + P +P + +L+ RPD++ + S K Sbjct: 266 SLRALIGAGAVDLAEI--RPVALPTPPSSLPATLSF--ELLARRPDLQAMRWYVEGSFDK 321 Query: 292 IGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I AK+ YPS + G AL + F + + P LYLPIFD G++ +N+ A Sbjct: 322 IDAAKAAFYPSFDIKAFFGVNALHLGDLFTHASQQINLVPGLYLPIFDGGRLNANLGGAR 381 Query: 349 SSAQEQYITWQETVLNAIKEVENA---LTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 S++ + + + +LNA++++ L ++ + K+ T+ A + S Y+ Sbjct: 382 SASNLLILQYNQAILNAVRDIATTGSQLQDLDAEAKLQTEKIQATTFSQDSAD---AQYQ 438 Query: 406 QGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGY 450 +G S L ++ ++A V L + R++ + + L A+G GY Sbjct: 439 RGLASRLTAVEAKQAVILERVALLDLDGRRIGQD-IALTKALGGGY 483 >gi|167893060|ref|ZP_02480462.1| outer membrane efflux protein OprB [Burkholderia pseudomallei 7894] Length = 250 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 6/243 (2%) Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + L + + +L+ L+F G S+L L + + +++ + ++ ++ + Sbjct: 2 VTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALASQQAQARARAQALNALVL 61 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 L+G P + L N Q NL I G+P+DL+ RPDI E+ L + A IG A Sbjct: 62 LIGEPLPDDLPAGLPL--NAQ-NLLTDIPAGLPSDLLTRRPDIMQAEETLRAANANIGAA 118 Query: 296 KSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P +SL G+ + T F WSF P + LPIF+ G+ +N+ A + Sbjct: 119 RAAFFPKISLTSAFGTASPTLGGLFKAGTAAWSFAPNIALPIFEGGQNIANLDLAHVQKR 178 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + +++ + +A +EV + L + + + L+ ++ LS + YR G S L Sbjct: 179 IEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYDLSDLRYRNGVDSYL 238 Query: 413 DIL 415 +L Sbjct: 239 SVL 241 >gi|332184396|gb|AEE26650.1| Outer membrane component of tripartite multidrug resistance system [Francisella cf. novicida 3523] Length = 490 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 117/478 (24%), Positives = 210/478 (43%), Gaps = 58/478 (12%) Query: 13 VLLAGCTV-GPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +L + C+ PEY +P + P L +I +KN ++ + WW FND LN L+ Sbjct: 16 LLTSSCSFFSPEYERPKVKAPALWNNQDKNIEVTKNW-DLTKVAWWREFNDPVLNNLITT 74 Query: 68 ALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SHRFIP---NLK 113 AL+ N ILQA IN A L SV F + + S IP N+ Sbjct: 75 ALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSSSNIPQLNNIG 134 Query: 114 TNST-GQLDS---DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T +T G L + I++ Q + E S + D +L++IS++ +Y Sbjct: 135 TQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLSIISQVSAAYFSLIT 194 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKL--SLVKLEAEIKS-----IESDIPTL 222 KE++ + +++ + + + GA+S + +++ + E++ I++DI Sbjct: 195 AKEQLKLQTLMVNQLNLMFKYAENQHKLGASSPMLEEVIRQQLEVQKGKIAMIKNDIVHF 254 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + ++ L+G + + + N N+ +P+N+ P+ ++ NRPDI E Sbjct: 255 QNTLKI-------LMGRNPGKIV--TSRTLNEINANIKVPVNM--PSQVLENRPDIGIAE 303 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYLPI 334 KL + A IG+A+S +PS+ L G+ L N++ + P L I Sbjct: 304 YKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFNLSI 363 Query: 335 F-DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 D K K+ +A Y + T+ A ++V+++L+ + K + K ++E Sbjct: 364 LADSDKAKAQFYQA-------YYDYINTLQQAFQDVDDSLSERAANAKNLKKQTISLEST 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +K + Y G S I ++ ++ AK + S V+LY A+GSGYN Sbjct: 417 QKQQKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQAKLKSLISVVNLYQALGSGYN 474 >gi|16131906|ref|NP_418504.1| outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. MG1655] gi|89110801|ref|AP_004581.1| predicted outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. W3110] gi|170021921|ref|YP_001726875.1| putative outer membrane efflux protein MdtP [Escherichia coli ATCC 8739] gi|170083534|ref|YP_001732854.1| outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. DH10B] gi|188494850|ref|ZP_03002120.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 53638] gi|194437266|ref|ZP_03069364.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 101-1] gi|238903189|ref|YP_002928985.1| putative outer membrane factor of efflux pump [Escherichia coli BW2952] gi|253775291|ref|YP_003038122.1| outer membrane efflux protein MdtP [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037087|ref|ZP_04871164.1| multidrug resistance outer membrane protein mdtP [Escherichia sp. 1_1_43] gi|254164015|ref|YP_003047123.1| putative outer membrane efflux protein MdtP [Escherichia coli B str. REL606] gi|256024955|ref|ZP_05438820.1| putative outer membrane efflux protein MdtP [Escherichia sp. 4_1_40B] gi|297518581|ref|ZP_06936967.1| putative outer membrane efflux protein MdtP [Escherichia coli OP50] gi|300932087|ref|ZP_07147380.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 187-1] gi|300946669|ref|ZP_07160926.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 116-1] gi|300957495|ref|ZP_07169706.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 175-1] gi|301644093|ref|ZP_07244104.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 146-1] gi|307140772|ref|ZP_07500128.1| putative outer membrane efflux protein MdtP [Escherichia coli H736] gi|331644826|ref|ZP_08345943.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H736] gi|2851560|sp|P32714|MDTP_ECOLI RecName: Full=Multidrug resistance outer membrane protein mdtP; Flags: Precursor gi|2367348|gb|AAD13463.1| outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. MG1655] gi|85676832|dbj|BAE78082.1| predicted outer membrane factor of efflux pump [Escherichia coli str. K12 substr. W3110] gi|169756849|gb|ACA79548.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli ATCC 8739] gi|169891369|gb|ACB05076.1| predicted outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. DH10B] gi|188490049|gb|EDU65152.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 53638] gi|194423822|gb|EDX39811.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 101-1] gi|226840193|gb|EEH72195.1| multidrug resistance outer membrane protein mdtP [Escherichia sp. 1_1_43] gi|238862707|gb|ACR64705.1| predicted outer membrane factor of efflux pump [Escherichia coli BW2952] gi|242379607|emb|CAQ34429.1| predicted outer membrane factor of efflux pump, subunit of SdsRQP multidrug efflux pump [Escherichia coli BL21(DE3)] gi|253326335|gb|ACT30937.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975916|gb|ACT41587.1| predicted outer membrane factor of efflux pump [Escherichia coli B str. REL606] gi|253980072|gb|ACT45742.1| predicted outer membrane factor of efflux pump [Escherichia coli BL21(DE3)] gi|260451090|gb|ACX41512.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli DH1] gi|300315771|gb|EFJ65555.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 175-1] gi|300453648|gb|EFK17268.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 116-1] gi|300460145|gb|EFK23638.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 187-1] gi|301077532|gb|EFK92338.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 146-1] gi|315138635|dbj|BAJ45794.1| putative outer membrane efflux protein MdtP [Escherichia coli DH1] gi|315617458|gb|EFU98064.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 3431] gi|323380532|gb|ADX52800.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli KO11] gi|323935489|gb|EGB31822.1| NodT family protein efflux transporter [Escherichia coli E1520] gi|323940265|gb|EGB36458.1| NodT family protein efflux transporter [Escherichia coli E482] gi|323960426|gb|EGB56061.1| NodT family protein efflux transporter [Escherichia coli H489] gi|323969781|gb|EGB65062.1| NodT family protein efflux transporter [Escherichia coli TA007] gi|331035801|gb|EGI08039.1| multidrug resistance outer membrane protein MdtP [Escherichia coli H736] gi|332346087|gb|AEE59421.1| efflux transporter, outer membrane factor (OMF) lipoprotein [Escherichia coli UMNK88] Length = 488 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/473 (18%), Positives = 206/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL--THDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L H ++ F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAE 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + E+ L + + + L ++G GY Sbjct: 431 AA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|224537883|ref|ZP_03678422.1| hypothetical protein BACCELL_02770 [Bacteroides cellulosilyticus DSM 14838] gi|224520497|gb|EEF89602.1| hypothetical protein BACCELL_02770 [Bacteroides cellulosilyticus DSM 14838] Length = 374 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 163/351 (46%), Gaps = 37/351 (10%) Query: 117 TGQLDSDWKIDLFGQ-----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +G + W+ID+FG+ RR L +L+ Y Q L I+ + Y Sbjct: 41 SGIASASWEIDIFGKLTNAKRRAKALYLQSLE--YEQAVTTSL--IANVANMYYTLLMLD 96 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + +++ + ++++++ G T + + + EA +E+ + L++ R + Sbjct: 97 AQYNVSAETAAKWRESVKTMRAMKAAGMTDEAGVAQTEANCYMVEASLLDLKQQIREVEN 156 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++S LLG + + + Q +F L +G+P L+ RPD++ E LA + Sbjct: 157 SLSILLG-DVPDAIERGKLQGQSFPEEL----TVGVPLQLLSRRPDVKSAELSLAQAFYS 211 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A+S YPS++L G+ T+ PG + G L P+F+KG + ++ A Sbjct: 212 TNAARSAFYPSITLGGTAGWTNSAGSMIINPGKLLLSAVG-SLTQPLFNKGLNMAQLKIA 270 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSIN--------EDKKIVTKLQHAVELHKKSMSL 399 ++ +E +++Q+ +LNA EV NALT + D +I T L+ AV +S L Sbjct: 271 KAQQEEAKLSFQQALLNAGSEVNNALTQVQVARGKTELRDGQI-TSLETAV----RSTQL 325 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKR-QLAKSYVDLYIAIGSG 449 M + G + L++L +++ ++ IA R + ++LY A+G G Sbjct: 326 LM---KHGNSTYLEVLTAQQSLLSAQLT-QIADRFDEIQGIINLYQALGGG 372 >gi|254183105|ref|ZP_04889697.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1655] gi|184213638|gb|EDU10681.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1655] Length = 619 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 104/473 (21%), Positives = 201/473 (42%), Gaps = 33/473 (6%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA + L + + +++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMALLDEHRADTLVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAATLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++N+ A ++ T+ +A +EV + L + ++ V + + ++ Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRDLAETK 425 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +R G + D +R + L K S V LY A+G G+ Sbjct: 426 RLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGW 478 >gi|269792993|ref|YP_003317897.1| outer membrane efflux protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100628|gb|ACZ19615.1| outer membrane efflux protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 435 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 76/378 (20%), Positives = 171/378 (45%), Gaps = 19/378 (5%) Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTN 115 D +L + V+ A+Q + +L A + + AA+ + R+ + P+ S + N Sbjct: 36 DLTLKEAVQTAIQNSQAVLAAEQDVKAAQALLQQARSAMMPTVNLQGGASRSSEEGSERN 95 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + G + + G + + ANL A + A+ S +++DA +E++ Sbjct: 96 NYGDISLSQTVYAGGAITAGLHQAEANLRKAQHNLQRAREEAASVAWDAFLDALLQREKL 155 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 A Q D Y + ++++ + G +KL + ++E ++ + T + ++ +S Sbjct: 156 RSAEQTRDYYARALDMARKRLEVGLNTKLEVSRMEQNLRDAVGSVVTARGNLERSLVTLS 215 Query: 235 TLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIP-----ADLIRNRPDIRYQEKKLADS 288 +G P+T + + L P+++ + A+ +RNR D+ + L Sbjct: 216 RAMGLDPSTSL---------SVKGELK-PVDLDLEEDRALAEALRNRRDLMALREDLEIQ 265 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + IA + + PS SL+GS L HD W+ L +P+ D GK + + + Sbjct: 266 RQGLIIAGASMRPSASLSGSYRLYHDKPGSTKEGEWTASLNLTVPLLDFGKTDAKVSQEA 325 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ I +E + ++V + ++ ++ ++ + ++E+ ++S++L+ + YR+G Sbjct: 326 AKLEKARIGLRELEDSIREQVSKGIIALRTARENLSAYRGSLEVSRESLALAEVGYREGV 385 Query: 409 YSLLDILDIERATAKVEV 426 + LD++ R + EV Sbjct: 386 NTQLDLISARRDLTQAEV 403 >gi|237745181|ref|ZP_04575662.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432410|gb|EEO42622.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 452 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/330 (21%), Positives = 165/330 (50%), Gaps = 15/330 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRF 108 +WW+ +N++ LN ++ IAL+ N + +A +N A + N+L ADL PS +S+ Sbjct: 47 EWWKEYNNSELNNIMNIALKNNSDLKKAAINVNKALYQANLLG--ADLVPSFSSSLGSSA 104 Query: 109 IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLI 161 N+KT + + +++IDL+ + + +++ + ++ AKL++++ ++ Sbjct: 105 SKNIKTGGDSTIKHSASVSLNYEIDLWRKLSNAKNAQEWEYQATTEDLEAAKLSLVNNVV 164 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + + ISI + ++ Y+K + K+ G S+L ++ E + ++++ + T Sbjct: 165 NTYFNIVYLNDAISILNDKIEQYEKINTVMKNKYQYGVNSELEYLQSEQSLTNLKNTLLT 224 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + LL E + K N I +N+ IP +I NRPD++ Sbjct: 225 YQNEKTEQEQTLRDLLNLKPEENIEIKAK---NLLSIKDIGVNLDIPISVIANRPDVKAY 281 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKI 340 E +L+ + + ++ LYPS+++ +++ + + + + LP + + Sbjct: 282 EYRLSKAFKDVKATQAKLYPSVTIQSTLSSSGNKVDNALSVPIGLASINISLPFLNWNTL 341 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVE 370 K NI+ E+S + + ++++++N++ E++ Sbjct: 342 KWNIKIDEASYESAKVDFEKSIVNSLNEID 371 >gi|313205190|ref|YP_004043847.1| rnd efflux system, outer membrane lipoprotein, nodt family [Paludibacter propionicigenes WB4] gi|312444506|gb|ADQ80862.1| RND efflux system, outer membrane lipoprotein, NodT family [Paludibacter propionicigenes WB4] Length = 472 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 104/441 (23%), Positives = 188/441 (42%), Gaps = 44/441 (9%) Query: 37 SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADL 96 ++ NS + ++ T+ W F D L L+ L+ + A RI A+ + ++ Sbjct: 46 AVENSADTTSLATIPWKSYFPDAKLQTLIGEGLKNGYNMKVALTRIQQAEAGLYMSKSAF 105 Query: 97 FPS-------SYASISHR------FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANL 142 PS Y +S F + NS G + + W+ DL+G+ +S A Sbjct: 106 LPSVGAAGRVDYTRLSSGKRGTDVFGYSSNINSLG-ITASWEADLWGKLNSQTKSKYAAY 164 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 + + + +IS + SY F E++ + + L +K+ E G + Sbjct: 165 LNTLEYKKLIQTTLISSIAKSYYSLMAFDEQLRTTKETIVLLQKSTETLQALKDAGQITA 224 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYI 261 + + +A + S + + LE R + I L+G P +Y+ Q I Sbjct: 225 AGVEQSKALLYSTQLSVFDLESKIRQQENAICVLIGRAPGAVDRNYINDQ--------II 276 Query: 262 P--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN----GSIALTHDN 315 P +N I + NRPD++ E L + A AK+ YP+ S+N G A N Sbjct: 277 PSRMNGNISVRTLANRPDVKQAELSLQSAYALTDAAKAAFYPTFSINTLSVGFAAGGVTN 336 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-- 373 F N L PIF KG++K N++ +++ E +T+ T+L A +EV + L Sbjct: 337 FFSPANLAAEIVAGLTQPIFAKGQLKGNLKISKAQQDEALLTFSNTLLVAGQEVSDILFS 396 Query: 374 --TSINEDK---KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 +S+++++ K V L +V+ ++ + NY + + ++L + + ++D Sbjct: 397 YKSSVSKNEWRDKQVESLVKSVDYTQELLKAGEANYTEVLSAQQNLLSAQLSKVNDKLD- 455 Query: 429 SIAKRQLAKSYVDLYIAIGSG 449 QL +S V LY A+G G Sbjct: 456 -----QLTQS-VSLYKALGGG 470 >gi|294338692|emb|CAZ87023.1| putative outer membrane efflux protein [Thiomonas sp. 3As] Length = 481 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/419 (21%), Positives = 183/419 (43%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 WW +F+D L++L AL N ++ A R+ A+ + + L P A++S Sbjct: 57 WWAAFHDPELDRLFATALTDNPSLQVAQARLEQARAQVQGAGSALKPKLGAAVSSTRQQF 116 Query: 108 --------FIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 + N +++ L W++D FG+ R +++++ +A AQ A++ + + Sbjct: 117 SNNYIYGPYGSNWYYDNSALLQGSWELDFFGKNRQTLQAAIGEAHAAAAQEQAARVLLAA 176 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y++ ++ Q L + ++L + G + + + AE+ I Sbjct: 177 NVASAYVNLARLIAIQNVLQQTLQQREHMLKLVQDRVRAGLETTVQEKQALAEVPQIRLQ 236 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 I + ++ L G + + Q P + +P + PA LI R DI Sbjct: 237 IDQTAVQITQARNLLAALTGQ-GPQATATLAPQLATL-PTMNLPDTL--PASLIGRRADI 292 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ ++ + A++ YP ++L G AL G + GP L LPIF Sbjct: 293 VAARWQVEAALHGVKAARAAFYPDVNLTAFAGFSALGFSQWLTGGSQTLGVGPALTLPIF 352 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++ +R + A + T+++A+ EV +A+ + + + + Q A++ + Sbjct: 353 EGGALRAQLRGKSAQADAAIAQYNGTLVDAVHEVADAIAARQSIGQQIAQQQQALDAAQD 412 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L Y+ G + L +L +E + K++ VDL K Q V L A+G GYN Sbjct: 413 ALRLVDQRYKAGLSNYLTVLTVESSVLKLQQAGVDL---KAQALADDVALIRALGGGYN 468 >gi|331655907|ref|ZP_08356895.1| multidrug resistance outer membrane protein MdtP [Escherichia coli M718] gi|331046261|gb|EGI18351.1| multidrug resistance outer membrane protein MdtP [Escherichia coli M718] Length = 488 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 94/478 (19%), Positives = 206/478 (43%), Gaps = 55/478 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + P+ L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPNQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPA----DLIRNRPDIR 279 ++ L+G A++ + +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDMPEI---------KAVALPQVQTGIPATLSYELLARRPDLQ 305 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + S+ ++ A++ YPS + G A+ D F + ++F P L LP+FD Sbjct: 306 AMRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFD 365 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELH 393 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A Sbjct: 366 GGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFT 425 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 426 QRAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|285018931|ref|YP_003376642.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283474149|emb|CBA16650.1| probable outer membrane efflux protein [Xanthomonas albilineans] Length = 483 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 103/488 (21%), Positives = 203/488 (41%), Gaps = 57/488 (11%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTS 60 +R + + + LL+ C++ P+Y +P P+ P+ + G++ +N + +L + + F D Sbjct: 1 MRHVALIAVCLLSACSLAPDYVRPAPPIPPSWPA-GDAYLARNEAALPSLTYRQMFRDPR 59 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SY---------- 101 L +L+ AL N + A I A+ RA+L P SY Sbjct: 60 LQRLIAQALDNNRDLRIAIANIAQARAQYRIQRAELLPEVSGTANGVRSYRGKGAAAAPA 119 Query: 102 ----ASISHRFIP---NLKTNSTGQLDSDWKIDLFG---------QRRHIESSLANLDSA 145 + ++ P + + S G + ++IDLFG Q+R++E Sbjct: 120 TANASDVTAAVAPSQGDTREYSLGVGITAFEIDLFGRVRSLTTAAQQRYLEQE------- 172 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 A +L ++ + +++ + + IA + + ++ L+ +F G L Sbjct: 173 -AAARATRLTLVGDIATAWLTYASDRSLMKIAQETVQSASMSVALTRQRFEGGIAPHSDL 231 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPNLYIPIN 264 + + + +SD+ + +V+ + L+G P E L +++ P + + Sbjct: 232 YQANQVLHTAQSDLAEQTTAMAQDVNALRLLVGGPVDPELLPGSIQEAT---PTIG-ELP 287 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 G+ + ++ RPD+ E L A+IG A++ L+P ++L G + L+ + TH Sbjct: 288 AGLDSSILLRRPDVVEAEYALRAVNAQIGAARAALFPRITLTGMLGLSS-TALSDLFTHA 346 Query: 325 SF----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 +F G IFD G ++N++ ++ T+++T+ A EV +AL Sbjct: 347 AFNRTVGASASAAIFDAGAARANVKYTQAQRDAALATYEKTLQTAFSEVSDALARRGTID 406 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + Q+ V + S YR G L LD +R+ + L + A + V Sbjct: 407 AQLLAQQNLVADSASNYQFSDQRYRGGVEPFLSNLDAQRSYYSAQRGLVATELIKATNLV 466 Query: 441 DLYIAIGS 448 LY +G Sbjct: 467 TLYRTLGG 474 >gi|256026700|ref|ZP_05440534.1| hypothetical protein PrD11_01665 [Fusobacterium sp. D11] gi|289764696|ref|ZP_06524074.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289716251|gb|EFD80263.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 452 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/330 (21%), Positives = 164/330 (49%), Gaps = 15/330 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRF 108 +WW+ +N++ LN ++ IAL+ N + +A +N A + N+L ADL PS +S+ Sbjct: 47 EWWKEYNNSELNNIMNIALKNNSDLKKAAINVNKALYQANLLG--ADLVPSFSSSLGSSA 104 Query: 109 IPNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLI 161 N+KT + + +++IDL+ + + +++ + ++ AKL++I+ ++ Sbjct: 105 SKNIKTGGNSAIKHSASISLNYEIDLWRKLSNAKNAQEWEYQATTEDLEAAKLSLINNVV 164 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y + + ISI + ++ Y+K + K+ G S+L ++ E + ++++ + T Sbjct: 165 NTYFNIVYLNNAISILNDKIEQYEKINTVMKNKYQYGVNSELEYLQSEQSLTNLKNTLLT 224 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + LL E + K N I +N+ +P +I NRPD++ Sbjct: 225 YQNEKTEQEQTLRDLLNLKPEENIEIKAK---NLLSVKDIGVNLDVPISVIANRPDVKAY 281 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKI 340 E +L+ + + ++ LYPS+++ +++ + + + + LP + + Sbjct: 282 EYRLSKAFKDVKATQAKLYPSVTIQSTLSSSGNKVDNALSVPVGLASINISLPFLNWNTL 341 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVE 370 K NI+ E+S + + ++++++N++ E++ Sbjct: 342 KWNIKIDEASYESARVDFEKSIVNSLNEID 371 >gi|300931459|ref|ZP_07146784.1| outer membrane efflux protein [Escherichia coli MS 187-1] gi|300460741|gb|EFK24234.1| outer membrane efflux protein [Escherichia coli MS 187-1] Length = 190 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 9/181 (4%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 RPDI E L + A IG A++ +PS+SL I+ + F + W+F PK+ Sbjct: 13 RPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIE 72 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +AL ++ Q + Sbjct: 73 IPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLA 132 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + Y+ G S L++LD ER AT + +DL+ A RQ+ + + LY A+G Sbjct: 133 SLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYA-RQVNE--ISLYTALGG 189 Query: 449 G 449 G Sbjct: 190 G 190 >gi|152971818|ref|YP_001336927.1| putative outer membrane efflux protein MdtP [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896412|ref|YP_002921150.1| putative outer membrane efflux protein MdtP [Klebsiella pneumoniae NTUH-K2044] gi|262039916|ref|ZP_06013188.1| multidrug resistance outer membrane protein MdtP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956667|gb|ABR78697.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548732|dbj|BAH65083.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042747|gb|EEW43746.1| multidrug resistance outer membrane protein MdtP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 482 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/464 (19%), Positives = 199/464 (42%), Gaps = 36/464 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 +GC + + + P Q + +L N D +WWE+++D LN L+ ALQ + Sbjct: 23 SGCALIQDEPAQVAIVNPQQAQLAQVIHLANSDWPAARWWEAYDDPQLNMLINRALQNSP 82 Query: 74 TILQATERINAAKENILSVRADL---------------------FPSSYASISHRFIPNL 112 T+ A RI+ ++ + R+ + +P SY+ + P Sbjct: 83 TMQAARLRISQSQSTVELARSAMGLQATAVAAQNRLRITDKSFSWPYSYSLPVDKNGPWY 142 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+ G + + IDL+G R + +++ ++ A+ +L++ S + Y + Sbjct: 143 TLNTVG-VGAQLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQLYFAMQATF 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I++ ++ + + ++E + +G + + +AE + I + E Sbjct: 202 QKIALLQELEGIARFSVEAHEHRTRRGLEDSVDVANAQAEQLAARQQIISAEGMLTQYRE 261 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A +H + P L + + +L+ RPD++ + S+ Sbjct: 262 TLRALIGADAQSMPAIHPVAL------PALQETLPPSLSFELLARRPDLQALRGYVTASL 315 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +++ AK+ YP + G AL+ + F + P LYLPIFD G++ +N++ Sbjct: 316 SQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLYLPIFDGGRLNANLQS 375 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + + VL+A+++V + + +N+ + Q V + + + +Y++ Sbjct: 376 VRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVTAAQTTTDSARAHYQR 435 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S + RA ++ L + Q + + L A+G GY Sbjct: 436 GLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGY 479 >gi|330011035|ref|ZP_08306962.1| multidrug resistance outer membrane protein MdtP [Klebsiella sp. MS 92-3] gi|328534324|gb|EGF60936.1| multidrug resistance outer membrane protein MdtP [Klebsiella sp. MS 92-3] Length = 482 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 92/464 (19%), Positives = 199/464 (42%), Gaps = 36/464 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 +GC + + + P Q + +L N D +WWE+++D LN L+ ALQ + Sbjct: 23 SGCALIQDEPAQVAIVNPQQAQLAQVIHLANSDWPAARWWEAYDDPQLNMLINRALQNSP 82 Query: 74 TILQATERINAAKENILSVRADL---------------------FPSSYASISHRFIPNL 112 T+ A RI+ ++ + R+ + +P SY+ + P Sbjct: 83 TMQAARLRISQSQSTVELARSAMGLQATTVAAQNRLRITDKSFSWPYSYSLPVDKNGPWY 142 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+ G + + IDL+G R + +++ ++ A+ +L++ S + Y + Sbjct: 143 TLNTVG-VGAQLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQLYFAMQATF 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I++ ++ + + ++E + +G + + +AE + I + E Sbjct: 202 QKIALLQELEGIARFSVEAHEHRTRRGLEDSVDVANAQAEQLAARQQIISAEGMLTQYRE 261 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A +H + P L + + +L+ RPD++ + S+ Sbjct: 262 TLRALIGADAQSMPAIHPVAL------PALQETLPPSLSFELLARRPDLQALRGYVTASL 315 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +++ AK+ YP + G AL+ + F + P LYLPIFD G++ +N++ Sbjct: 316 SQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLYLPIFDGGRLNANLQS 375 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + + VL+A+++V + + +N+ + Q V + + + +Y++ Sbjct: 376 VRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVTAAQTTTDSARAHYQR 435 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S + RA ++ L + Q + + L A+G GY Sbjct: 436 GLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGY 479 >gi|15801882|ref|NP_287902.1| partial putative outer membrane channel protein [Escherichia coli O157:H7 EDL933] gi|12515491|gb|AAG56518.1|AE005377_11 partial putative outer membrane channel protein [Escherichia coli O157:H7 str. EDL933] Length = 342 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 160/340 (47%), Gaps = 22/340 (6%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLD--- 121 AL N + +A I++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 S + +DLFG+ + + + L S + + +L +I+++ +++ +++A + Sbjct: 123 SSFTLDLFGRNQSLSRAARETWLASEFTAQNT-RLTLIAEISTAWLTLAADNSNLALAKE 181 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + + ++++ + G + + + + + + + + + + + ++ L G Sbjct: 182 TMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAGT 241 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 E L +S Q +P G+ +D++ RPDI+ E L + A IG A+++ Sbjct: 242 TLEENLLPGTLESLPEQMISLVPA--GVSSDVLLRRPDIQEAEHNLKSANADIGAARANF 299 Query: 300 YPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 +P++SL S + D + +H WSF P + LP+F Sbjct: 300 FPTISLTASAGVGSD-ALSSLFSHGMQIWSFTPSVTLPLF 338 >gi|167901516|ref|ZP_02488721.1| outer membrane efflux protein OprB [Burkholderia pseudomallei NCTC 13177] Length = 211 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 17/193 (8%) Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 P+DL+ RPDI E+ L + A IG A++ +P +SL G+ + T F W Sbjct: 1 PSDLLTRRPDIMQAEETLRAANANIGAARAAFFPKISLTSAFGTASPTLGGLFKAGTAAW 60 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 SF P + LPIF+ G+ +N+ A + + +++ + +A +EV + L + + + Sbjct: 61 SFAPNIALPIFEGGQNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIA 120 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS------ 438 L+ ++ LS + YR G S L +L + DL A++QL + Sbjct: 121 ALERNEHAQQRRYDLSDLRYRNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWT 173 Query: 439 -YVDLYIAIGSGY 450 VDLY A+G G+ Sbjct: 174 NLVDLYRALGGGW 186 >gi|32471919|ref|NP_864913.1| outer membrane lipoprotein IbeB [Rhodopirellula baltica SH 1] gi|32397291|emb|CAD72597.1| probable outer membrane lipoprotein IbeB [Rhodopirellula baltica SH 1] Length = 614 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/345 (21%), Positives = 170/345 (49%), Gaps = 37/345 (10%) Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQ 179 W++D++ + R+ +++ A Y + V+++L+ +Y + R+ + Sbjct: 286 WEVDIWKRLRNAQNAAA---MRYLATKEGRNYVVTRLVAEIAENYYELLALDNRMQTLQK 342 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 +D+ ++++++S+ G ++L++ + +AE+ ES+ + + + I+ L+G Sbjct: 343 TIDIQQRSLDISNAMKEAGRGNQLAVQRFQAEVHKNESERAVIAQEIVETENRINFLVGR 402 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 YP H + + + N+ ++ G+P++L++NR DIR E+++A + + +A++ Sbjct: 403 YPQ----HVDRTEVDFIDLNMQT-LSAGVPSELLQNRADIREAERRVAAAGLDVKVARAR 457 Query: 299 LYPSLSLNGSIALTHDNSFP-GY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 YPSL+L G + N+F GY + +S + P+ +K IK++ + A + Sbjct: 458 FYPSLTLTGGLGW---NAFATGYLFRTPESLIYSVAGDIVGPLINKRAIKADYQTANAVQ 514 Query: 352 QEQYITWQETVLNA-------IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + +Q+TVL A + +V+N SI KK + L+ +V+ K + Sbjct: 515 LQSIYNYQQTVLEAHVEVVNLVSKVDNYRNSIEVKKKQLQSLEESVDSAGKL-------F 567 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + R +++L +R + ++ L K++ + ++ Y A+G G Sbjct: 568 QNARAEYVEVLLAQRELMEAKMLLIDTKQEELSAIINAYQALGGG 612 >gi|327541512|gb|EGF28047.1| outer membrane efflux protein [Rhodopirellula baltica WH47] Length = 593 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/345 (21%), Positives = 170/345 (49%), Gaps = 37/345 (10%) Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQ 179 W++D++ + R+ +++ A Y + V+++L+ +Y + R+ + Sbjct: 265 WEVDIWKRLRNAQNAAA---MRYLATKEGRNYVVTRLVAEIAENYYELLALDNRMQTLQK 321 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG- 238 +D+ ++++++S+ G ++L++ + +AE+ ES+ + + + I+ L+G Sbjct: 322 TIDIQQRSLDISNAMKEAGRGNQLAVQRFQAEVHKNESERAVIAQEIVETENRINFLVGR 381 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 YP H + + + N+ ++ G+P++L++NR DIR E+++A + + +A++ Sbjct: 382 YPQ----HVDRTEVDFIDLNMQT-LSAGVPSELLQNRADIREAERRVAAAGLDVKVARAR 436 Query: 299 LYPSLSLNGSIALTHDNSFP-GY------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 YPSL+L G + N+F GY + +S + P+ +K IK++ + A + Sbjct: 437 FYPSLTLTGGLGW---NAFATGYLFRTPESLIYSVAGDIVGPLINKRAIKADYQTANAVQ 493 Query: 352 QEQYITWQETVLNA-------IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + +Q+TVL A + +V+N SI KK + L+ +V+ K + Sbjct: 494 LQSIYNYQQTVLEAHVEVVNLVSKVDNYRNSIEVKKKQLQSLEESVDSAGKL-------F 546 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + R +++L +R + ++ L K++ + ++ Y A+G G Sbjct: 547 QNARAEYVEVLLAQRELMEAKMLLIDTKQEELSAIINAYQALGGG 591 >gi|332525321|ref|ZP_08401486.1| putative outer membrane transport protein involved in copper (silver) tolerance (cusC) [Rubrivivax benzoatilyticus JA2] gi|332108595|gb|EGJ09819.1| putative outer membrane transport protein involved in copper (silver) tolerance (cusC) [Rubrivivax benzoatilyticus JA2] Length = 473 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 181/424 (42%), Gaps = 40/424 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------S 100 W E F + L L+ AL N + A R++ A RAD P+ + Sbjct: 50 WREYFAEPGLQALIAQALANNRDLRIAARRVDEAAAGYGLQRADEGPTIGLQSRGIRYHT 109 Query: 101 YASIS-HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVI 157 A +S R S G S W++DLFG+ R + S L S A+ + +L ++ Sbjct: 110 PADLSLTRQAGTAGAQSAGLGFSSWEVDLFGRLRALSDSARERWLASEAARRAV-ELQLV 168 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ Y ER+++A + + ++++ ++ + G++S+L+L+++ + +S Sbjct: 169 AQVADGYFGLCELDERLALARETVASRRESLRITSRRVEVGSSSRLTLLQVRTLLTQAQS 228 Query: 218 DIPTLEKSFRMNVHNIST------LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + TLE+ + ++ +L P L Sbjct: 229 LVATLERERAAQLEALALLAGARPVLPEPLPRLDALAALAPLAPGLPAT----------L 278 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 + RPD+ E +L S A + A++ +P ++L GS + F + W F P Sbjct: 279 LERRPDLVAAEAQLRASRASVAAARAAFFPQVTLTGQWGSASAELSGLFESGSRQWLFTP 338 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LP++D G N+ AE+ ++++V A ++V +AL++ + V Sbjct: 339 SIALPLWDWGLRARNLDLAEARRDIAVAQYEKSVQAAFRDVADALSARRWVDEQVLIAGD 398 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIA 445 A+ ++ L+ + + G S LD+LD ER A + EV A+R + V L+ A Sbjct: 399 ALAAQRERARLARLRWDTGSSSFLDVLDAERDLLAAQQAEVQ---ARRGALAARVALFAA 455 Query: 446 IGSG 449 +G G Sbjct: 456 LGGG 459 >gi|300938227|ref|ZP_07152994.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 21-1] gi|300456771|gb|EFK20264.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 21-1] Length = 488 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 92/477 (19%), Positives = 202/477 (42%), Gaps = 53/477 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINI--DTLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSVWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q ++ ++ K +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRNVIDYAVKAHQSKVAHSLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDK 337 + S+ ++ A++ YPS + L D F + ++F P L LP+FD Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDG 366 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHK 394 G++ +N+ +++ + ++VLNA+++V L ++N+++++ + A + Sbjct: 367 GRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQ 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ + Y++G S L + E+ L + + + L ++G GY Sbjct: 427 RAAEAA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|260772902|ref|ZP_05881818.1| outer membrane protein of RND family multidrug efflux pump [Vibrio metschnikovii CIP 69.14] gi|260612041|gb|EEX37244.1| outer membrane protein of RND family multidrug efflux pump [Vibrio metschnikovii CIP 69.14] Length = 460 Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/395 (22%), Positives = 181/395 (45%), Gaps = 51/395 (12%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW++F D L+ LV+ L N + AT + A+ N R P A +S Sbjct: 51 QWWKNFQDPKLDLLVERVLSTNHDLALATLTLKQARLNANLDRDQQIPDLAAGVSGNRSK 110 Query: 111 NLKTNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 +L T ++ +++DL+G+ I+ S + + + ++++ Y Sbjct: 111 DLNHGDTSNNYQARISVSYEVDLWGKLSATIDESQWKALATQQEREATAQSLVATTAQLY 170 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + K+RI ++ Q +D +N L+ ++T GATS+L++++ + + +E+ ++ Sbjct: 171 WQIGYLKQRIRLSQQDIDNAIQNFNLAQSQYTHGATSRLTVLETKRSLAGLEAAHRDYQQ 230 Query: 225 SFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 +R + ++ L P + Q QP +P I+ GIPA+++ RPD++ Sbjct: 231 QYRQASNALAILFEQDPEQAAIEIDQ------QPAQALPAISAGIPAEVLARRPDVKQAL 284 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPKLYLP 333 +L +A + +P+L+L G++ G +T + G L LP Sbjct: 285 YQLQAFLAAKESTRRSYFPALTLTGALG--------GSSTELKKLLSDPIGTLGADLTLP 336 Query: 334 I--FDKGKIKSNIRRAESSAQEQY----ITWQETVLNAIKEVENALTSIN----EDKKIV 383 +++ ++K +I AQ QY I +++T+ A ++V+NAL++ + +K+V Sbjct: 337 FLNWNEMQLKRDI------AQVQYESAIINYRKTLYAAFQDVDNALSARENYQYQAEKLV 390 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + Q A E +M + Y+ G + +LD + Sbjct: 391 QQWQSAAE----AMRIYQSQYQHGAIEIKTLLDAQ 421 >gi|330982030|gb|EGH80133.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 490 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 91/394 (23%), Positives = 173/394 (43%), Gaps = 43/394 (10%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLK---WWESFNDTSLNKLV 65 ++L+GC++ P Y +P +P+ Q S N+ + + + E L L+ Sbjct: 25 LVLSGCSLIPAYQRPALPVPVDQVSAVVAAANTSTAVVLSADEEALAGELSPKGELRGLL 84 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIPNLK 113 + AL N + A R+ A+ RAD FP+ A + R+ ++ Sbjct: 85 QSALAFNRDLRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDIS 144 Query: 114 TNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S G SD+++D FG+ R + + + L S Y Q A+ +I+++ +++ R Sbjct: 145 IASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALIAEVARAWLAERLTA 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDIPTLEK 224 A + + ++ + + QGA S +L + + +++ SD + Sbjct: 202 AVQQDAQAVHEARLMLVKAAEEQQRQGALSLDELMVQRLDTLTAQQQVQDAASDHANASQ 261 Query: 225 SFRM-NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + + ++ + L P T L ++ + NL P+ + R DIR +E+ Sbjct: 262 ALLLLTGYSTALPLSTPDTPALTAALVETPPWLSNL--------PSQRLLERFDIRQREE 313 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKI 340 L S A IG A++ +PS+ L+ + L D+ F + W F P+L LP+FD G+ Sbjct: 314 ALKASNANIGAARAAFFPSIKLSNGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGGRN 373 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 ++N+ A+ Q +++ V NA +E+ LT Sbjct: 374 QANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 407 >gi|295676617|ref|YP_003605141.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] gi|295436460|gb|ADG15630.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1002] Length = 506 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 91/419 (21%), Positives = 189/419 (45%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 W + F D L L+ ALQ + T+ QA R+ A+ + +A+ P Sbjct: 66 WVDQFGDAQLKVLIAEALQGSPTLEQARARVAQAQAYSETAKANTLPRVDASYTLTRQQF 125 Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 SS A I + + +T + L + + +DL+G+ R + ++++ ++ A + +L + Sbjct: 126 SSTALIPPPYAGSWQTENKELLSASYDLDLWGKNREALRAAVSEASASEADAQVVRLTLD 185 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + SY + AR + R IA Q + ++ ++ + G ++L EA + + Sbjct: 186 TSIARSYNELARLYALR-DIAQQEVARREQIERITAGRIANGLDTELERKTAEANLSTSR 244 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + L+ S R + ++ LLG L + + + ++ +P N+ PADL+ RP Sbjct: 245 ARVSALDGSIRSTRYQLAALLGKGPDRGLA-ITRPTLAGDDDVRLPDNL--PADLLSRRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLP 333 DI ++ ++ AK++ YP ++L+ +I L + S GP ++LP Sbjct: 302 DIVAARWRVDAITHEVKEAKAEFYPDINLSAAIGLDAFGFGRFLSAASRTASVGPAIHLP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++++ ++ + T+ +T++ A+ V + I + A + Sbjct: 362 IFDAGELRAQLKGRYAEFDYAVATYNQTLIGALSGVATQIAQIRSSDAQLGDALAAQQAA 421 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + L+ Y+ G + L +L+ + + D +IA ++ + + L A+G GY Sbjct: 422 SDADRLATTQYKAGLTNQLTVLNAD--VTALNADEAIANLKMNRRDQQIQLASALGGGY 478 >gi|295085849|emb|CBK67372.1| Outer membrane protein [Bacteroides xylanisolvens XB1A] Length = 338 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 28/313 (8%) Query: 15 LAGCTVGPEYTKPHMP--LLPTQFSIGN--SKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 L+GC + YTK + P ++P G +++ + + W E F D L L+++ LQ Sbjct: 19 LSGCGI---YTK-YEPATVVPDDLYGGEVVTEDTAGLGNMDWRELFTDPYLQSLIEVGLQ 74 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDWK 125 N A R+ A+ ++S + P+ +A + + T Q + + W+ Sbjct: 75 TNTDYQSAQLRVEEAQAVLMSAKLAFLPA-FALAPQGTVSSFDTQKATQTYSLPVTASWE 133 Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQIL 181 +D+FG+ R+ + L YAQ + + V ++LI +Y E++ ++ Q Sbjct: 134 LDVFGRMRNSKKQAKAL---YAQSEDYRQAVRTQLIAGIANTYYTLLMLDEQLDLSRQTE 190 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YP 240 + +K+ + + G ++ ++ ++EA ++ + L++ ++++ LL P Sbjct: 191 EAWKETVASTRALMNAGLANESAVSQMEAAYYQVQGSVLDLQQQINQVENSLALLLAETP 250 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + KQ F + +IGIP ++ +RPD+R E+ L + A+S Y Sbjct: 251 RNYERGVLAKQ--QFPADF----SIGIPVRMLSSRPDVRSAERTLEAAFYGTNAARSAFY 304 Query: 301 PSLSLNGSIALTH 313 PS++L+GS T+ Sbjct: 305 PSITLSGSAGWTN 317 >gi|34497697|ref|NP_901912.1| outer membrane drug efflux lipoprotein [Chromobacterium violaceum ATCC 12472] gi|34103553|gb|AAQ59914.1| outer membrane drug efflux lipoprotein [Chromobacterium violaceum ATCC 12472] Length = 459 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 103/463 (22%), Positives = 199/463 (42%), Gaps = 27/463 (5%) Query: 5 RAIFSLFIVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 RA L LAGC + P+Y +P P+ P + ++++ + W F D L + Sbjct: 3 RAFCLLMGAALAGCASPQPDYQRPAAPV-PAHWPAADAES--GQADIAWRRFFVDDGLRE 59 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNLKTNST 117 + AL N + A + AA+ + A P+ S ++ P+L +S Sbjct: 60 TIAQALANNRDLRVAAANVQAARAQYRILDAARLPAVQLQGKSDRQLTRGGDPSLAADSR 119 Query: 118 GQLD----SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 G S +++DLFG+ R + ++ ++ A A++++I++ +Y+ + Sbjct: 120 GVSAGLGVSAFELDLFGRVRSLSDAQWRRYLASEAGAQAARVSLIAETANAYLTLAADRS 179 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ A L ++++EL+ + GA+S L + +E + +D+ + + Sbjct: 180 QLAAARTTLRSAERSLELTRERLRLGASSALDVSAMETVRQQARADVARYQGQAERDRLA 239 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+G E + +P + PAD + RPD+R E L + A + Sbjct: 240 LQLLVG---AELDQTRVPAALEDRPYTLAALPADAPADALLRRPDVRQAENLLRAAHADV 296 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAES 349 A++ L+P L L+ S L+ N S LP D G K+ + +AE+ Sbjct: 297 DAARAGLWPKLGLSASSGLSGVTLAGLLNAPARALSLALDASLPALDGGAAKAGVDQAEA 356 Query: 350 SAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + N +EV AL+ ++ E+K+ Q A+ + S+ L+ YRQ Sbjct: 357 QRLAALAAYEKALQNGFREVAGALSQRQALAEEKQAR---QAALASAEGSLRLAEARYRQ 413 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G L +L+ +R + A A++ LY ++G G Sbjct: 414 GLDGYLSLLEAQRTAQAARLQWIGAHLAEAENMAALYRSLGGG 456 >gi|254252532|ref|ZP_04945850.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124895141|gb|EAY69021.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 512 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 91/431 (21%), Positives = 194/431 (45%), Gaps = 40/431 (9%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN--ILSVRADLFPSSYASISH 106 +L W F D L KL+ AL N +I QA + AK + I S R++L P + AS S Sbjct: 74 SLDWASQFGDPQLPKLIDEALAGNPSIAQAQAQARIAKASSYIESSRSNLLPKAEASYS- 132 Query: 107 RFIPNLKTNST-------GQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVD 150 + L +++ GQ S+ W++DL+G+ R + ++++ +A A + Sbjct: 133 -WTRELYSSNALFPPPYGGQWYSENNVLASASWELDLWGKNRERLRTAVSQEKAAEADMQ 191 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A++ + S + +Y IA + + + +++ + + G + + Sbjct: 192 QARITLASSVARTYNSLAQLYALRDIAQREISNRETVGKITEGRVSAGLDTNVERQTARG 251 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 I + ++ + L+ + ++ LLG L Q + P + + +PAD Sbjct: 252 NIATTQASLSDLDGQITTVRYQLAALLGKGPDRGL---QIAAPVLDPTGAVALPDNLPAD 308 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-------H 323 L+ RPDI ++ ++ + AK++ +P ++L ++F G+ Sbjct: 309 LVSRRPDIVAARWQVEAAMHDVKEAKAEFFPDVNLAAGFGF---DAF-GWGKFLNFASRQ 364 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 FGP ++LPIFD G +++ ++ + + +T+++A+ +V + SI + + Sbjct: 365 AQFGPAIHLPIFDAGALRAQLKGRYADFDLSVANYNQTLISALNDVATQVASIRAIDRQM 424 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYV 440 + Q A++ ++ L++I Y+ G L +L + A+ + +L + +R + + Sbjct: 425 SDAQRALDAATRAYDLAVIRYKAGLSPQLQVLTADSNRLASEQTVTNLKMRRRDM---QL 481 Query: 441 DLYIAIGSGYN 451 L A+G G++ Sbjct: 482 ALIKALGGGFD 492 >gi|222839446|gb|EEE77783.1| predicted protein [Populus trichocarpa] Length = 241 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 3/204 (1%) Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 Q + L + +G+P+DL++NRPDI E +L + A IG A++ +P ++L S Sbjct: 7 QGLGLEEKLVAEVPVGLPSDLLQNRPDILSAEHRLKAANADIGAARAAFFPRITLTASAG 66 Query: 311 LTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 + F W F P++ LPIF G +++++ A+ ++ T+ A + Sbjct: 67 TASRQLSDLFAAGQGTWLFSPQIVLPIFTAGSLQASLDYAKIQKDINVAAYERTIQGAFR 126 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 EV + L + V V + +L+ Y G S L +LD +R + Sbjct: 127 EVADGLAARGTFSDQVQAQVRLVRASQDYFTLAEHRYSTGVDSYLTLLDAQRQLYNAQQT 186 Query: 428 LSIAKRQLAKSYVDLYIAIGSGYN 451 L + S V+LY A+G G+ Sbjct: 187 LITDRLNQLTSEVNLYKALGGGWT 210 >gi|257468900|ref|ZP_05632994.1| multidrug resistance outer membrane protein MdtQ [Fusobacterium ulcerans ATCC 49185] gi|317063149|ref|ZP_07927634.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313688825|gb|EFS25660.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 473 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 114/444 (25%), Positives = 193/444 (43%), Gaps = 64/444 (14%) Query: 17 GCTVGPEYTKPHMPLLPTQFS---IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN- 72 GC+ P+ TK + + P S GN K + WW+ +ND L++LV AL++N Sbjct: 16 GCSPIPKITKNEI-ITPDSISTDTFGNQK--LTFSNTNWWKMYNDPVLDQLVDFALKENE 72 Query: 73 ------LTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIP-NLKTNSTGQ--L 120 L IL+A E IN AK + +++ DL P K + G L Sbjct: 73 DLKIAKLNILKADEAINLAKADSGITINLAGDLKREKLGKNGTTPPPFGGKIINIGNIGL 132 Query: 121 DSDWKIDLFGQ------RRHIESSLANLDSAYAQVD----IAKLNVISKLIPSYIDARHF 170 +D+ IDLF + + ++ L+S + ++D + +L V K + Y + Sbjct: 133 QADYNIDLFNKTSSLTAEQKYKAEAVKLNSKWIELDLSNRVTRLYVYWKYL--YQENAIL 190 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ +I +I L K N LK G + V + EI+ I++ + E + ++ + Sbjct: 191 TEQKNILTEIEKLQKTN-----LKIGNGIEDDVWAV--QDEIRGIDTLLKENELNKQLTI 243 Query: 231 HNISTLLGYP-ATEFLHYMQKQSNNFQPNLY--IPINIGIPADLIRNRPDIRYQEKKLAD 287 +N++ L G +TE +QK S N + + I I +D+I NRPD+ Y + Sbjct: 244 NNLNILSGNKHSTEISSLLQKNSQNLKTTFKEKVSIPSSISSDIIINRPDVEYYLMLIKG 303 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDN--------SFPGYNTHWSFGPKLYLPIFDKGK 339 + AK+D YP S+ G N S G+ GP +YLPIF G Sbjct: 304 QEKHLDAAKADFYPQFSITGEYEFEGINFNKILRKDSLLGF-----IGPSIYLPIFHSGA 358 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENAL-------TSINEDKKIVTKLQHAVEL 392 IKS + A + + + ++NA +V+N L +++N+ + + + Sbjct: 359 IKSTYKIAGTDMNIFIEEYNKAIINAYNDVDNELYKTKTLWSTLNDSDENFKTQTNLLSR 418 Query: 393 HKKSMSLSMI---NYRQGRYSLLD 413 KK + + I +Y +YS D Sbjct: 419 DKKRLDIGTISKYDYLSKKYSWYD 442 >gi|254787513|ref|YP_003074942.1| outermembrane efflux protein [Teredinibacter turnerae T7901] gi|237686753|gb|ACR14017.1| putative outermembrane efflux protein [Teredinibacter turnerae T7901] Length = 464 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 97/468 (20%), Positives = 191/468 (40%), Gaps = 35/468 (7%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +R+I L + L G P +P +P Q++ NS ++ ++ WWE F+ L Sbjct: 1 MRSIAFLSVSFLVGACAS---QTPQLPEGDIPEQWTSINSPSVEQWPSMTWWEDFHQPEL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD 121 + QQNL + A + A+ N+ DL P+ S+ NL +T LD Sbjct: 58 TLYLTQVRQQNLALGIAQRNLRIAQINLRDAGFDLAPTPNISV------NLSKTATDTLD 111 Query: 122 SDWK---------------IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 K D+ + + + A + AQ L++ + SY Sbjct: 112 DGVKRAVADQASATATLGYSDILKKPGQFQLARATFAAEQAQQASIALDIYNTAAQSYFQ 171 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E++++A Q LD + + + K G T L ++ ++ + + +L+++ Sbjct: 172 LLFIREQLAVAQQNLDSAESLLNIIQSKVDNGTTQPLDALQQRIAVQQQRNALASLQQNE 231 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKL 285 + ++ L+ P + +H+ + + ++ +P I G+PA L++ RPDI E L Sbjct: 232 FSVLSTLALLVAKPVAD-VHF----NGDTLADIVVPDIQPGLPAALLKRRPDIIQAEANL 286 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A +A+ P++SL G D+ S + + D G Sbjct: 287 QIASANQLLARLAFLPNISLTGQAGAVSDSLAELIKSPTVVLSAAASVVETLLDNGARAR 346 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N +A + ++++T L A EV L + K++ + + +++ ++ I Sbjct: 347 NNTKARLRLENSVASYRQTALAAFNEVNVLLQNARLAKQLSDVAKADLHRAEEANRIAQI 406 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+QG +L + A + V K + + + LY A+G G+ Sbjct: 407 RYQQGAEPYQTLLTTQNAMFAIRVQSLQTKLERINTLLALYQALGGGW 454 >gi|261867982|ref|YP_003255904.1| hypothetical protein D11S_1303 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413314|gb|ACX82685.1| hypothetical protein D11S_1303 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 457 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/402 (20%), Positives = 172/402 (42%), Gaps = 40/402 (9%) Query: 8 FSLFIVL---LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +L IV+ L GC +G Y + Q++I N WW+ + D Sbjct: 7 LTLTIVVATTLTGCANIGDSYRASLKNYKQYEEITKQYNIKND----------WWKLYKD 56 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-- 116 LN++V+ AL N + +AT +N A + A+L P+ S N+KT Sbjct: 57 AQLNRVVEKALLNNKDLAKATISVNRALYSANLAGANLVPAFSGSTRSTAQKNIKTGGNS 116 Query: 117 ----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFK 171 TG L+ + +DL+ + + A Q ++ KL++I+ ++ +Y + Sbjct: 117 TISHTGSLNVSYTLDLWFRLADTADAAEWTHKATVQDMESTKLSLINSVVTTYYQIAYLN 176 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + IS + + Y + + QG +S+ + + + + +++ T + + + Sbjct: 177 DAISTTKESIKYYTDISNIMRNRLAQGVADSISVDQAQQAVLTARNNLITYQLNRKTAEQ 236 Query: 232 NISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + LL E F H ++ +S + +N+ +P +I NRPDI+ + +L+ Sbjct: 237 TLRNLLNLKPDETLKITFPHILKVKS--------VGVNLNVPVSVIANRPDIKGYQARLS 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIR 345 + + + +P ++L GS+ + NT G + LP + +K N++ Sbjct: 289 SAFKNVKATEKSWFPEITLGGSLNSSGKKLNSATNTLIGGGALGISLPFLNWNTVKWNVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +E+ + + +++++ A+ +V+ S + KK T Q Sbjct: 349 ISEADYETARLNYEKSITVALNDVDTNYFSFTQAKKRFTNAQ 390 >gi|295096486|emb|CBK85576.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 409 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 85/389 (21%), Positives = 186/389 (47%), Gaps = 22/389 (5%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAK--ENILSVRADLFPSSYASISHRFIP 110 W++FND L+ ++ + +N + A R+ A+ E + + D P S++ Sbjct: 5 WQAFNDPDLDGWLRQVMVRNNDVAGAVLRVYRARLEEERIGITND--PGLKGSLALDGKK 62 Query: 111 NLKT------NSTGQLDSDWKIDLFGQ--RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 L + S +++ +++DL+G+ R+ + A S + A+L ++S Sbjct: 63 QLNSSAHWSRGSVASINTSYELDLWGKIARQRDAKAWARFASE-EDLRSARLTLLSNASN 121 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y +++S+ Q +D K+ + L++ ++ G S L +V + + S E+ + L Sbjct: 122 NYWRLGFINQQLSVLQQSIDYAKETLRLANARYAAGGASSLDVVDAQQGVLSQENRLAAL 181 Query: 223 EKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRY 280 + ++ + LLG P + + P +P ++ IP +++R+RPDI Sbjct: 182 KNERLQALNQQAVLLGTAPGSAIVE------PKALPMGPLPQVSGKIPVNVLRHRPDISA 235 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGK 339 +E ++ +++A + + ++ YP+ SL GS+ + + N S G L LP + + Sbjct: 236 KEWRVREALATVDVQRTAFYPAFSLTGSLGTSSSSLIAFLENPVGSVGANLTLPFLEWRE 295 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 +++ A + +++ + +++ + A+ +E+AL ++ + T L+ +EL KKS L Sbjct: 296 RGMDVKIARNDYEQRVLEFKQELYKAMSSIEDALALRHQLLEQETLLREGLELAKKSERL 355 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDL 428 + + YRQG + LD + + E+ L Sbjct: 356 NEVRYRQGAVRISFWLDAQEKRRQAELAL 384 >gi|254292713|ref|YP_003058736.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] gi|254041244|gb|ACT58039.1| RND efflux system, outer membrane lipoprotein, NodT family [Hirschia baltica ATCC 49814] Length = 463 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 110/464 (23%), Positives = 208/464 (44%), Gaps = 35/464 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 AI + + G + +YT + P ++++ D W F+ +N L+ Sbjct: 10 AILASGCASIGGGDIATDYTLATTSI-PNEWAVTLPSPASQSD---WTTQFDSDVMNGLI 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSD-- 123 K A+Q N ++L A R +A + R D P AS L GQ +SD Sbjct: 66 KEAIQANPSLLAARARASATYATSRAARGDRLPDLSAS------STLGRVGLGQTESDTA 119 Query: 124 -------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 W++DL+GQ + I +S + +++ A +D +L++ + ++I + + +++ Sbjct: 120 SISLTTSWEVDLWGQVSKRISASDEDFNASQADLDDLRLSIAGRTANAWISLSNSRAQLT 179 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A L K+ EL+ + G + L + + S ES I + + + Sbjct: 180 LAEDELAARKRARELTERRVGTGLATTLDVRLARSAEASAESSIARAQLDVSDSARALEV 239 Query: 236 LLG-YPATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIRNRPDIRYQEKKLADSVAKIG 293 LLG YPA E + P L + I P DL+ RPD+ E ++A + + Sbjct: 240 LLGRYPAAEI------NAPETPPTLGPMADANISPMDLLARRPDVAASEARMAAAGLRAD 293 Query: 294 IAKSDLYPSLSL--NGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A+ + PSLSL +G+I T + + PIF+ GK+ + + A + Sbjct: 294 LARIAMRPSLSLSASGTIETTEIGDLLDVDQLAGRVLANIASPIFNGGKLANQAKSARLN 353 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A+ + VL A +EVE A ++ ++ LQ A+E + + ++ Y+QG S Sbjct: 354 AEAAAANYASVVLAAWQEVEGARSADLSLEQQEYALQIAMEEAQAAEVIAERQYQQGLIS 413 Query: 411 LLDILDIE--RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + D+++ + R +AK ++ + A R + + ++ ++A+G G P Sbjct: 414 IFDLINAQTRRISAKSQLIAARASRGINR--INYHLALGGGDAP 455 >gi|325526646|gb|EGD04186.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 243 Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGY 320 G+P+ L+ RPD+ E++L + A IG A++ +P ++L +GS AL HD G Sbjct: 35 GLPSSLLTRRPDVIAAERELQATRANIGAARAAFFPRIALTSAIGSGSSAL-HDLLSSGA 93 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 WS P + LP+ D G+ +SN+ + + E +++T+ A ++V +AL + + Sbjct: 94 GV-WSVIPNVTLPLVDGGRNRSNLALSHAQRDEALAQYEKTLQRAFRDVSDALAARHWLA 152 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 V + + + L+ + Y G L++LD +R E L + +R L S V Sbjct: 153 DQVAIERATLTSQAERARLAKLRYDSGATRFLEVLDAQRDLMNAEQQLVMTRRALLSSRV 212 Query: 441 DLYIAIGSG 449 LY A+G G Sbjct: 213 ALYGALGGG 221 >gi|325276478|ref|ZP_08142239.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas sp. TJI-51] gi|324098386|gb|EGB96471.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudomonas sp. TJI-51] Length = 327 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 27/288 (9%) Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + L Y+++ L+ G S L L + ++ ++ +V++++ Sbjct: 36 LTEETLKTYEESYNLTRRSNEVGVASALDLSQARTAVEGARVKYSQYQRLVAQDVNSLTV 95 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINI----------GIPADLIRNRPDIRYQEKKL 285 LLG NL P+ + G+P+D+++ RPDI+ E L Sbjct: 96 LLG--------------TGIPANLPKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLL 141 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A IG A++ +PS+SL GS++ + F G W F P++ LPIF+ G +K+ Sbjct: 142 KAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKA 201 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ ++ +++T+ A +EV + L + ++ + + V+ ++ L+ Sbjct: 202 SLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAER 261 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S L LD +R + L + S V+LY A+G G+ Sbjct: 262 RYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 309 >gi|257487440|ref|ZP_05641481.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 468 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 89/445 (20%), Positives = 191/445 (42%), Gaps = 37/445 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++L GC +G KP H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVLNGC-IGTHGIKPQGSFLHADSLATDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D LN V IA + I +++E + L +R D + Sbjct: 64 RAYGDAQLNHWVDIATLGSPGLALAAARVRQARAMAQIAESSESVQVQGSASL-MRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNV 156 P ++ L + +DL+G+ R+ E +L + A+ A+L + Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQALDLAHMSAAEQRQAQLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 182 QENVVRAYIQLALEYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFEISQAETPLPEAH 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I L+++ ++ + ++ L G E +Q+ + + L +P +PA+L+ RP Sbjct: 242 RQIDALQEAIALSRNQLAALAGKGPGEGA-ALQRPTLSLHTELKMPS--ALPAELLGRRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLY 331 D+ ++A I +A + YP++ L GS++ G + GP + Sbjct: 299 DVVAARWQVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAIS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G++++ + +A ++ + + +T++ A+K + + L K +V Sbjct: 359 LPIFDGGRLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAESVA 418 Query: 392 LHKKSMSLSMINYRQGRYSLLDILD 416 +K+ +++I +++G L++L+ Sbjct: 419 STQKTYDIALIAWQRGLTDYLNVLN 443 >gi|87429119|gb|ABD38133.1| putative TdeA [Aggregatibacter actinomycetemcomitans] Length = 457 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/402 (20%), Positives = 172/402 (42%), Gaps = 40/402 (9%) Query: 8 FSLFIVL---LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +L IV+ L GC +G Y + Q++I N WW+ + D Sbjct: 7 LTLTIVVATTLTGCANIGDSYRASLKNYKQYEEITKQYNIKND----------WWKLYKD 56 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-- 116 LN++V+ AL N + +AT +N A + A+L P+ S N+KT Sbjct: 57 AQLNRVVEKALLNNKDLAKATISVNRALYSANLAGANLVPAFSGSTRSTAQKNIKTGGNS 116 Query: 117 ----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFK 171 TG L+ + +DL+ + + A Q ++ KL++I+ ++ +Y + Sbjct: 117 TISHTGSLNVSYTLDLWFRLADTADAAEWAHKATVQDMESTKLSLINSVVTTYYQIAYLN 176 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + IS + + Y + + QG +S+ + + + + +++ T + + + Sbjct: 177 DAISTTKESIKYYTDISNIMRNRLAQGVADSISVDQAQQAVLTARNNLITYQLNRKTAEQ 236 Query: 232 NISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + LL E F H ++ +S + +N+ +P +I NRPDI+ + +L+ Sbjct: 237 TLRNLLNLKPDETLKITFPHILKVKS--------VGVNLNVPVSVIANRPDIKGYQARLS 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIR 345 + + + +P ++L GS+ + NT G + LP + +K N++ Sbjct: 289 SAFKNVKATEKSWFPEITLGGSLNSSGKKLNSATNTLIGGGALGISLPFLNWNTVKWNVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +E+ + + +++++ A+ +V+ S + KK T Q Sbjct: 349 ISEADYETARLNYEKSITVALNDVDTNYFSFTQAKKRFTNAQ 390 >gi|209965721|ref|YP_002298636.1| outer membrane efflux lipoprotein, NodT family protein [Rhodospirillum centenum SW] gi|209959187|gb|ACI99823.1| outer membrane efflux lipoprotein, NodT family protein [Rhodospirillum centenum SW] Length = 484 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 181/405 (44%), Gaps = 13/405 (3%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WWESF D +L++LV L++N + A + A+ R L P + A Sbjct: 84 RWWESFADPALDRLVTAVLERNNDLAAAGLTLRRARVQAGLSRDALRPQANAGGGGTLRR 143 Query: 110 PNLKTNSTGQLDSD--WKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYI 165 + +TN + + +++DL+ +R + A ++ + D+A +L +I+ SY Sbjct: 144 QDGETNDSYSVSGGLSYEVDLW-RRLDATADAATWEAVATEQDLAATRLALIATTAGSYW 202 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + RI++ Q + ++ EL +++ G L L + E + S E+ L + Sbjct: 203 RLGYLNHRIALGEQSIAHARRTAELVRVQYRTGGVGLLELNEAEQSVLSQEAAQAALVQQ 262 Query: 226 FRMNVHN-ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R+ N ++ LLG P ++ P + G+PA+L+ RPD+R E + Sbjct: 263 -RVEARNALAVLLGGPPWP----EAEEPQTLPPADPGVVRPGLPAELLGRRPDLRAAELR 317 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSN 343 L S+A + ++ YPS+ L GS + + N + G + LP + ++ Sbjct: 318 LRRSLALVDADRAAFYPSIGLTGSGGGSSTSLGDVLANPVATLGVDISLPFVNWNRLSLT 377 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +E + + ++E +L A++EV++AL++ + + A+ + + L Sbjct: 378 LETSELDYRRAVLQFRENLLTALREVDDALSASRQLAIQAEREAGALAAAETAERLYETR 437 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 YR G L LD + E L+ + + ++ V L+ A+G Sbjct: 438 YRAGAVPLRSWLDAQERRRSAENALAQTRLDVFQNRVTLFQALGG 482 >gi|171060382|ref|YP_001792731.1| RND efflux system outer membrane lipoprotein [Leptothrix cholodnii SP-6] gi|170777827|gb|ACB35966.1| RND efflux system, outer membrane lipoprotein, NodT family [Leptothrix cholodnii SP-6] Length = 478 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 96/473 (20%), Positives = 204/473 (43%), Gaps = 52/473 (10%) Query: 17 GC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK----WWESFNDTSLNKLVKIALQQ 71 GC ++ P Y +P P+ PTQ + ++ W + + +LV++AL Sbjct: 17 GCGSLAPTYERPAAPV-PTQLPLAAAEAASASAAPAAPLAWQDFVRHPAPRRLVELALAN 75 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN------STGQLDSDWK 125 N + A + A+ + AD +P+ ++ PN ++ + G + W+ Sbjct: 76 NRDLRVAALNVERARAQLDVSLADRYPTIGVGVAANSAPNTQSGNQAQSYTAGLQMASWE 135 Query: 126 IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +D G+ ++ +++ + L + A A+L ++ ++ SY++ + + +A + L Sbjct: 136 LDFLGRIGNLNDAARSQLLATEAGRRSAELALVGAVLSSYLNLVADAQLLGVAERTLASR 195 Query: 185 KKNIELSHLKFTQGATSKL---SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-- 239 + +L+ +K GA SKL S V L A+ + +++ R +++TL Sbjct: 196 EATFKLTRIKSDAGAASKLEEQSAVTLLAQARVAR------QQALRQRSQDLATLALLLG 249 Query: 240 ---------------PA--TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 PA T ++ L + +G+ ++++ RPD+ E Sbjct: 250 GPVPDDAVPQPPVLDPAGDTSAPAPDDAGADAAWAALLAEVPVGLSSEVLLRRPDVVQAE 309 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 ++L + A IG A++ ++P ++L G + F G N W+ G + + +FD G+ Sbjct: 310 QQLQAANANIGAARAAMFPRITLTASAGQASSQFSGLFQGGNFAWTLGAQALMTLFDAGR 369 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI----NEDKKIVTKLQHAVELHKK 395 ++N+ ++ ++ V A K+ +AL + ++ + +L A E+ + Sbjct: 370 NQANVNASKVGRDIAVAQYERAVQAAFKDTADALNGLATWRDQRQAQADQLASAREIAR- 428 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L+ + Y G S L+ LD +R+ E L + ++ V L+ A+G Sbjct: 429 ---LTELRYGAGAASELERLDAQRSLYAAEQALVQTRLAEQQNRVGLWKALGG 478 >gi|238024015|ref|YP_002908247.1| NodT family RND efflux system outer membrane lipoprotein [Burkholderia glumae BGR1] gi|237878680|gb|ACR31012.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia glumae BGR1] Length = 518 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 96/439 (21%), Positives = 191/439 (43%), Gaps = 53/439 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI--LSVRADLFPSSYASISHRFI 109 W D L+ LV A + N T+ A RI A+ + S L ++ AS++ + Sbjct: 66 WVRQLGDAQLDALVAEAYENNPTLQAAKARIAIAQAQLQQYSAMTGLVGTAGASVTKARV 125 Query: 110 PNLKTNSTGQLDSDW---KIDLFGQRRHIESSL-ANLDSAYAQVDI------AKLNVISK 159 P +++ +++ ++LFG SSL A L+ Q+D+ A ++S Sbjct: 126 P--RSDGVANVNAGGFNVPVELFGDPAISSSSLYAGLNY---QLDLWGAHAAATRGLLSN 180 Query: 160 LIPSYIDARHFKERISIAHQILDLYKK----NIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + +DA + R+++A ++ LY + + L+ + A+ ++ V E + I Sbjct: 181 RDAARVDAE--QARLTLAVSLVTLYCELDQVYAQRDQLEQKRAASEQIDAVLRERAARGI 238 Query: 216 E----------------SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 + + I + ++ R+ I + G L + + Sbjct: 239 DNAYDASDAAIKRSRLLAQIASADEQIRLIEVQIGVMTGKGPERGLALARPHPGQL---V 295 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNS 316 P+ +PA+L+ RPDI ++ + A + A++D YP+++L G ALT Sbjct: 296 DAPLPAQLPAELLGRRPDIVAARLRVQAAFASVDGARADFYPNVNLSAIGGLFALTPAGL 355 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 G S GP + LPIF++G++K+ + ++A + +TV A+ +V LT + Sbjct: 356 LRGRAFGGSIGPAVSLPIFERGRLKAKLAGNVANADVAIALYNQTVDQALGQVARQLTQL 415 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAK 432 ++ Q AV+ ++ + ++ +R+G + + ++ R T E +DL + Sbjct: 416 RTMDTLLAGQQKAVDAAQRIVGIAEERHRRG-FGMEKDVNNARLTLADERTRMIDLLARR 474 Query: 433 RQLAKSYVDLYIAIGSGYN 451 R L +D A+G G++ Sbjct: 475 RALRIGLID---ALGGGFD 490 >gi|89256075|ref|YP_513437.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica LVS] gi|115314551|ref|YP_763274.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica OSU18] gi|156502092|ref|YP_001428157.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009800|ref|ZP_02274731.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica FSC200] gi|254367408|ref|ZP_04983434.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica 257] gi|290954538|ref|ZP_06559159.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica URFT1] gi|295312054|ref|ZP_06802869.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica URFT1] gi|89143906|emb|CAJ79125.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica LVS] gi|115129450|gb|ABI82637.1| outer membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134253224|gb|EBA52318.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica 257] gi|156252695|gb|ABU61201.1| outer membrane efflux protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 490 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 117/484 (24%), Positives = 211/484 (43%), Gaps = 57/484 (11%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ S ++ + PEY +P + P L +I +KN ++ + WW FND L Sbjct: 10 ALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNW-DLTKVAWWREFNDPVL 68 Query: 62 NKLVKIALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SHRFIP 110 N L+ AL+ N ILQA IN A L SV F + + S+ IP Sbjct: 69 NNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIP 128 Query: 111 ---NLKTNST-GQLDS---DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N+ T +T G L + I++ Q + E S + D +L++IS++ + Sbjct: 129 QLNNIGTQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLSIISQVSAA 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL--SLVKLEAEIKS-----IE 216 Y KE++ + +++ + + + GATS + +++ + E++ I+ Sbjct: 189 YFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQKGKIAMIK 248 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 +DI + + ++ L+G + + + N N+ +PIN+ P+ ++ NRP Sbjct: 249 NDIVHFQNTLKI-------LMGRNPGKIV--TSRTLNEINANIKVPINM--PSQVLENRP 297 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGP 328 DI E KL + A IG+A+S +PS+ L G+ L N++ + P Sbjct: 298 DIGIAEYKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVP 357 Query: 329 KLYLPIF-DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L I D K K+ +A Y + T+ A ++V+++L+ + K + K Sbjct: 358 VFNLSILADSDKAKAQFYQA-------YYDYINTLQQAFQDVDDSLSERAANAKNLKKQT 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++E ++ + Y G S I ++ ++ K + S V+LY A+G Sbjct: 411 ISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALG 470 Query: 448 SGYN 451 SGYN Sbjct: 471 SGYN 474 >gi|330954700|gb|EGH54960.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 490 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 45/403 (11%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI------GNSKNLINIDTLKWWESFN- 57 R + L + L+GC++ P Y +P +P+ Q S +S +++ D + Sbjct: 17 RCLAMLASLTLSGCSLIPAYQRPALPVPVDQASAVVPASNTSSAVVLSADEEALAGELSP 76 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----------- 106 L +L++ AL N A R+ A+ RAD FP+ A + Sbjct: 77 KGELRRLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAAD 136 Query: 107 -RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPS 163 R+ ++ S G SD+++D FG+ R + + + L S Y Q A+ +I+++ + Sbjct: 137 ERYGQDISIASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALIAEVARA 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIE 216 ++ R A + + ++ + + QGA S +L + + +++ Sbjct: 194 WLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMAQRLDTLSAQQQVQDAA 253 Query: 217 SDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 SD ++ + + ST+L P T L ++ ++ NL P+ + Sbjct: 254 SDHANASQALLL-LTGYSTVLPVSTPDTPALTTALVETPSWLSNL--------PSQRLLE 304 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLY 331 R DIR +E+ L S A IG A++ +PS+ L+ + L D+ F + W F P+L Sbjct: 305 RFDIRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLN 364 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 LP+FD G+ ++N+ A+ Q +++ V NA +E+ LT Sbjct: 365 LPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 407 >gi|167627633|ref|YP_001678133.1| outer membrane efflux protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597634|gb|ABZ87632.1| outer membrane efflux protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 490 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 107/485 (22%), Positives = 215/485 (44%), Gaps = 52/485 (10%) Query: 3 ILRAIFSLFIVLLAGCTV-GPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFN 57 I+ ++ L++ C+ P+Y +P + P L ++ +KN N+ + WW F+ Sbjct: 6 IISSVLITTTFLISSCSFFDPKYERPKVKAPALWNSQDKNVEITKNW-NLTKIAWWREFH 64 Query: 58 DTSLNKLVKIALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SH 106 D LN L+ AL+ N ILQA IN A L SV F + I S+ Sbjct: 65 DPVLNNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDINSN 124 Query: 107 RFIP---NLKTNSTGQ----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 IP N+ T + G + + I++ Q + E S + + +L++IS+ Sbjct: 125 SSIPQLNNVGTQTAGGSLVGIIPSYTINIARQFKLGEISRLSKKMQVNLKNTTRLSIISQ 184 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y +E++ + Q+++ + + + GATS + + ++++ + + Sbjct: 185 VSAAYFSLITAQEQLKLQTQMVNQLELLFYYAENQHKLGATSPMLEEVIRQQLEAQKGKV 244 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++ + + L+G + + + N+ ++ +P+N+ P+ ++ NRPD+ Sbjct: 245 AMIKNDIVHFQNTLKILMGRNPGKIV--TSRTLNDINADIKVPVNL--PSQVLENRPDVG 300 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL------- 332 E KL + A IG+A+S +PS+ L G+ N + G + Sbjct: 301 IAEYKLQTANANIGLARSQFFPSIDLTGTFG----------NATLALGELATMNAWAWAA 350 Query: 333 ------PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 PIF+ I ++ +A+S + Y + T+ A ++V++ L+ + ++K TK Sbjct: 351 EAVAAVPIFNLS-ILADSDKAKSQFYQAYYDYISTLQKAFQDVDDTLSERSANEKNYTKQ 409 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 +++ ++ S+ Y G S I ++ ++ AK + S V+LY A+ Sbjct: 410 TVSLKSTERQESIFSKKYSSGAISKAQYTGITLNVIYQQMQVNQAKLKSLISIVNLYQAL 469 Query: 447 GSGYN 451 G+GYN Sbjct: 470 GAGYN 474 >gi|221068757|ref|ZP_03544862.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] gi|220713780|gb|EED69148.1| RND efflux system, outer membrane lipoprotein, NodT family [Comamonas testosteroni KF-1] Length = 498 Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 110/474 (23%), Positives = 205/474 (43%), Gaps = 49/474 (10%) Query: 13 VLLAGCTVGPEY------TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 LLA C PE+ +P +P N ++ T +WW+ + D L++L+ Sbjct: 26 ALLAACAQVPEWEGKAVLAQP----VPETLQAANHAPPMDWPTQQWWQRYGDAQLDQLIA 81 Query: 67 IALQ-------------QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPN 111 AL+ Q +L +E AA LS RA + SY ++ Sbjct: 82 QALEGAPDMAAAAARVQQARAMLGVSE---AASAPQLSARASVSEDKLSYHHLTPEAFAP 138 Query: 112 LKTNSTGQ--LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N G+ LD W +DL+G QR + ++ L + A A+L + S + +Y Sbjct: 139 RGMNDYGRATLDLSWSLDLWGKQRAAVAAAAGELAAREADAAQARLLLSSNVALAYAQLL 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q + + + EL ++ G ++ S+ A + ++++ +++ + Sbjct: 199 RLAANVQTLEQSVQVRRTTAELFEQRYANGLENQGSVHSARARQAAAQAELAQMQEQVAL 258 Query: 229 NVHNISTLLGYP----ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI---RYQ 281 ++I+ L+G A L + QS +Q +P + PA L+ RPD+ R Q Sbjct: 259 QRNSIAALMGAAPDRGAAIALDAGRLQSP-WQQQWALPPQL--PAHLLGRRPDVVAARLQ 315 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + L VA +++ YP ++L+ G +L D + S GP + LPIF+ G Sbjct: 316 AQALESRVAS---QQAEFYPDVNLSAFVGVQSLGLDMLTRSGSGIASLGPAVSLPIFNGG 372 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++S + A + E ++ T+ A++EV + S ++ +T +Q AV ++ Sbjct: 373 RLRSQLGAARARYDEAVAQYRSTLNRALQEVADNAVSQRALQQQLTAMQQAVTAATEAHR 432 Query: 399 LSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ Y G LD+L E + A V + + R L + L+ A+G G++ Sbjct: 433 VARNRYEGGLARYLDVLSAEDQLLASVRQLVDVQSRALTLD-IGLHRALGGGWS 485 >gi|194365185|ref|YP_002027795.1| NodT family RND efflux system outer membrane lipoprotein [Stenotrophomonas maltophilia R551-3] gi|194347989|gb|ACF51112.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas maltophilia R551-3] Length = 441 Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 3/189 (1%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTH 323 +PADL+R+RP I E ++ + A G A++ +YP +SL GSI ++ N+ ++ Sbjct: 245 VPADLLRHRPQILLAESEVMQAAASKGSARAAMYPRVSLGGSILYAYNLTQNARSNSDSS 304 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP + +P++D G+ ++ E + +++ VL + EVE AL S+ + Sbjct: 305 PSIGPYIDIPLWDWGQRRARFNADEKQLDAALLGYRKAVLEGVSEVEGALGSLARQDSSI 364 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 L+ A ++ + + + G S D LD +RA + DL A+ ++ LY Sbjct: 365 QSLRAANDVAGQQVKRQARQVQLGLSSEFDGLDTQRAALASQADLIGAQGARVLAFASLY 424 Query: 444 IAIGSGYNP 452 A+G P Sbjct: 425 RALGGAPLP 433 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 27/157 (17%) Query: 25 TKPHMP-LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERIN 83 T P +P P+ ++ + +D +WW+ +D +L+ LV A+ NL + QAT R+ Sbjct: 4 TVPDLPDRTPSTWTQVPQGQGVAVDAKQWWKVLSDPALDGLVDQAIAGNLDLQQATLRLQ 63 Query: 84 AAKENILSVRADLFPSSYASISHRFIPNLKTNST-------------GQLDSDWKIDLFG 130 A + I++ +D RF+P + ++ +++ W + LFG Sbjct: 64 AVR--IVAGTSD----------SRFLPEISASAKQVQDAAAVDTYFHAGIEAIWDLGLFG 111 Query: 131 QRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + S+ A+ +A A + A++ VI+ ++ SY+D Sbjct: 112 AAESAQLSAQASAGNAEALRNAAQVAVIADVVRSYLD 148 >gi|257485088|ref|ZP_05639129.1| outer membrane efflux protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 226 Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 32/228 (14%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVK 66 SL ++ LA C VGP+Y P P Q + N +DT+ WW+ F D +LNKLV Sbjct: 10 SLLVMALAACAVGPDYKAPVTA--PAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVA 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL-KTNSTG------- 118 +L N + A R+ AA+ ++R D+ + I+ R +L K G Sbjct: 67 RSLDGNRDLRVAFARLKAAR----AIRDDVANDAMPVITSRASSDLGKGQQPGVTERRVN 122 Query: 119 ------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + Sbjct: 123 SERYDLGLDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQ 182 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSI 215 R +IA L KN + S TQ G ++L +V+ EA + ++ Sbjct: 183 LREAIARDNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAV 226 >gi|157827176|ref|YP_001496240.1| RND efflux system, outer membrane protein [Rickettsia bellii OSU 85-389] gi|157802480|gb|ABV79203.1| RND efflux system, outer membrane protein [Rickettsia bellii OSU 85-389] Length = 388 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 163/337 (48%), Gaps = 13/337 (3%) Query: 123 DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++IDL+G + ES+ L ++ + +L VIS + SY + ++I + +++ Sbjct: 56 NYEIDLWGLAANASESARRTLLASEYSKEAVRLTVISNVTISYFNILALDKQIYLTKRLI 115 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + +L+ + G +S+ + +E+ S +P L + + + LLG Sbjct: 116 ETQTEIYKLTQKLYDLGVGDLISVSEAASELALTNSSLPPLVQQRQEQETALKILLGCSP 175 Query: 242 TEFLH---YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ Y K + F +P +I +P++L+ RPDI+ E+ L + + + K+ Sbjct: 176 ENIVNGLVYRDKPIDYFPTTPVLP-SI-LPSELLEQRPDIKAAEQNLFAADSNLRAVKAT 233 Query: 299 LYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL G + + N+ G + W G + PIFD GK ++N+ AES+ Q+ Sbjct: 234 YFPQISLTGLLGFGSNKLNTLFGSSAETWQVGGTIAGPIFDFGKTRANVEVAESTKQQYI 293 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM-SLSMINYRQGRYSLLDI 414 ++ TV A EV +AL S+ + ++ E S+ L+ Y+ G L + Sbjct: 294 AIYKATVRTAFGEVMDAL-SLEQTASNNFRIWQQNETALTSIFKLANQRYKHGNIDYLTV 352 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGY 450 L ++ + E+D +SI QL+ S V+++ A+G + Sbjct: 353 LTAKQNMLQNEIDGVSIKLSQLS-SMVNVFHALGGNW 388 >gi|167566029|ref|ZP_02358945.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] gi|167573109|ref|ZP_02365983.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis C6786] Length = 517 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 102/451 (22%), Positives = 194/451 (43%), Gaps = 77/451 (17%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W F D L+ LV ALQ+N T+ A RI A+ + + L ++ AS+S + Sbjct: 65 WVRQFGDPQLDTLVGEALQRNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHL 124 Query: 110 P----------------------NLKTNSTGQLDSDWKIDLFGQRRHIESSLANL-DSAY 146 P ++ ++S+ + ++++DL+G+ L ++ D+A Sbjct: 125 PRSGGTVNTVVNGFPVSVPLVGESVMSSSSLFVGLNYQMDLWGKNAAATRGLMSMRDAAR 184 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 + + A+L + ++ Y + + A+ + DL ++ S ++ V Sbjct: 185 VEAEQARLTLSVAMVTLYGE-------LDRAYALRDLLQQKRRSSE---------QVETV 228 Query: 207 KLEAEIKSIE----SDIPTLEKS-----FRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 E + I+ +D L++S + I L ++ + +P Sbjct: 229 LRERAARGIDNGYDADDAALKRSKLLEQIALTGEQIQLLKLQLGGLTGRGPERGLSLARP 288 Query: 258 NLY----IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIA 310 L P+ +PA+L+ RPDI ++ + A I ++ YP + +L G A Sbjct: 289 KLAPLADAPLPARLPAELLGRRPDIVAARLRVESAYAAIDGTRASFYPDVNLAALGGLFA 348 Query: 311 LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 LT + F S GP L LP+FD+G++K+ + ++A + +TV A+ EV Sbjct: 349 LTPASLFSRDALGGSIGPALSLPVFDRGRLKAKLGGDVANADVALALYNQTVDAALGEVA 408 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG----------RYSLLDILDIERA 420 LTS++ ++ + Q AV ++ ++L+ +R+G R +LLD ER+ Sbjct: 409 RQLTSLSTVDALLKEQQQAVRSAQRMVALAEDRHRRGMGMQKDVNLARLTLLD----ERS 464 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 A ++L +R L V L A+G G++ Sbjct: 465 HA---IELQARRRTL---RVGLIGALGGGFD 489 >gi|91205465|ref|YP_537820.1| RND efflux system, outer membrane protein [Rickettsia bellii RML369-C] gi|91069009|gb|ABE04731.1| RND efflux system, outer membrane protein [Rickettsia bellii RML369-C] Length = 388 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 163/337 (48%), Gaps = 13/337 (3%) Query: 123 DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++IDL+G + ES+ L ++ + +L VIS + SY + ++I + +++ Sbjct: 56 NYEIDLWGLAANASESARRTLLASEYSKEAVRLTVISNVTISYFNILALDKQIYLTKRLI 115 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + +L+ + G +S+ + +E+ S +P L + + + LLG Sbjct: 116 ETQTEIYKLTQKLYDLGVGDLISVSEAASELALTNSSLPPLVQQRQEQETALKILLGCSP 175 Query: 242 TEFLH---YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 ++ Y K + F +P +I +P++L+ RPDI+ E+ L + + + K+ Sbjct: 176 ENIVNGLVYRDKPIDYFPTTPVLP-SI-LPSELLEQRPDIKAAEQNLFAADSNLRAVKAT 233 Query: 299 LYPSLSLNGSIALTHD--NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 +P +SL G + + N+ G + W G + PIFD GK ++N+ AES+ Q+ Sbjct: 234 YFPQISLTGLLGFGSNKLNTLFGSSAEIWQVGGTIAGPIFDFGKTRANVEVAESTKQQYI 293 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM-SLSMINYRQGRYSLLDI 414 ++ TV A EV +AL S+ + ++ E S+ L+ Y+ G L + Sbjct: 294 AIYKATVRTAFGEVMDAL-SLEQTASNNFRIWQQNETALTSIFKLANQRYKHGNIDYLTV 352 Query: 415 LDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGY 450 L ++ + E+D +SI QL+ S V+++ A+G + Sbjct: 353 LTAKQNMLQNEIDGVSIKLSQLS-SMVNVFHALGGNW 388 >gi|300311271|ref|YP_003775363.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gi|300074056|gb|ADJ63455.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 481 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 157/337 (46%), Gaps = 18/337 (5%) Query: 122 SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 S W++D +G+ + E++L ++ A +++I ++ ++ R ER+ + + Sbjct: 141 SSWELDFWGRIASLNEAALQEWMASRAAEQALVISLIGQVAAAWTSLRELDERLHLLETL 200 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 +++ L + G +L + +E+ + ++ L++ M STL Sbjct: 201 QAATAESLALMQARHDAGRADAAALAQQRSELAQMRAEQAELQQ---MRASQRSTL---- 253 Query: 241 ATEFLHYMQKQSNNFQP---NLYIPINI--GIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 E L + + +P + +P + G+P+ L+ RPDI E +L S A++ A Sbjct: 254 --EMLAGLTQLPAALEPAPTTILLPFALAPGLPSTLLAARPDIIAAEHRLQASAAQVAAA 311 Query: 296 KSDLYPSLSLN--GSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ +P +SL G +A T + F G + W+F P++ LP+ D G +S A Q Sbjct: 312 RAAFFPRISLTAFGGVASTALQDLFKGPSRAWNFVPEISLPLLDGGLRQSRYDIAALDQQ 371 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + ++ TV NA +EV L + K+ + + V+ + + + R GR S L Sbjct: 372 RALLDYERTVQNAFREVAQRLEEAHWLKEQLRLRREVVQQQAQRQAQMHMRLRYGRASRL 431 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D+L+ ER + + + + L ++ + LY+A+G G Sbjct: 432 DVLESERDHLRAQQRQHMLEHALLRNQIALYVALGGG 468 >gi|307725921|ref|YP_003909134.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] gi|307586446|gb|ADN59843.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. CCGE1003] Length = 516 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/427 (19%), Positives = 188/427 (44%), Gaps = 37/427 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRF 108 WW +ND L++LV A N + +RI A+ A P AS S R+ Sbjct: 78 WWRQWNDPQLDQLVADATAGNPGLQAIGQRIEVARFQAQIAGAAELPQLNASGSFERRRY 137 Query: 109 I-------PNLKTNSTGQLDSD--WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVIS 158 P T + +++D + +DL+G+ R + E +L N+ +A A A++ + + Sbjct: 138 ARYTTPAPPGGTTVWSNSIEADLSYDLDLWGKSRALREGALDNVRAAAADARFAQVELQT 197 Query: 159 KLIPSYIDARHFKERISIAHQILDLYK-------KNIELSHLKFTQGATSKLSLVKLEAE 211 ++ Y+ ++S+A+ +LD+ + ++++ +F G S L + + E++ Sbjct: 198 AVVRGYV-------QLSLAYALLDVQSAVQSQQQRTLDIAKRRFRAGVGSGLEVSQAESQ 250 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + ++ + ++ L G + +++ + +P + PA+L Sbjct: 251 LAMSTTRLQQAQQQIALARIGLAGLAGK-GPGYGDTLRRPGLALSVPVKLPATL--PAEL 307 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-------NTHW 324 + +R D+ ++ ++ I A +D YP ++L +L +F G+ Sbjct: 308 LGHRADVVANRWRVQEADKGIAAAHADFYPDINLVALASLGSAATFGGFLNFVDSNGVGH 367 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 G + LP+FD G+ + N A +S + ++V+NA++ V + S+ ++ Sbjct: 368 GVGAAISLPVFDGGRRRGNYGVAVASRDAAVDAYNQSVVNALQGVAAQVVSLRSLEEQQA 427 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 ++ + +KS L+ YR G L++L + A + + L+ + + ++ L Sbjct: 428 SVESTLASTRKSFELADAGYRSGITEFLNVLAAQNAQLEQQESLAAIQARRLDAWALLMK 487 Query: 445 AIGSGYN 451 +G G+ Sbjct: 488 ELGGGFQ 494 >gi|283787103|ref|YP_003366968.1| cation efflux system protein [Citrobacter rodentium ICC168] gi|282950557|emb|CBG90223.1| cation efflux system protein [Citrobacter rodentium ICC168] Length = 475 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 100/473 (21%), Positives = 194/473 (41%), Gaps = 50/473 (10%) Query: 2 NILRAIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 I L +LLAGC +Y +P + L P Q+ + W+ F D Sbjct: 16 GIFAGATCLIALLLAGCGHLTRSDYQRPLLSL-PVQWQAATDN-----PSDDGWQRFGDP 69 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 L ++++ L+ N + A + A+ +L P S + N++ ST Q Sbjct: 70 RLTRVIEQVLESNNDLAAAAITLQQARVAAGLTNTNLTPDVTVSGAASNSKNVRRGSTPQ 129 Query: 120 ------LDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + +++DL+G+ R E + Y ++ + ++L Y Sbjct: 130 ENYSSGIAISYELDLWGKLARIREQSEWQAVASEQDYRATVLSTIGTTAQL---YWRIAL 186 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 + ++I L + ++ +E F G +L L++ + ++ + ++ R Sbjct: 187 YNQQIRNQRAALTIAEQTVEQVASWFNAGKVGRLDLLQAQQARLERQNQLRAYQQQRRSA 246 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ LL PA + +S N +P+ P +I RPDI+ E +L ++ Sbjct: 247 RNALALLLNRPAEQHTD----ESPALDVNQQVPVAQKTPLRVIAQRPDIQAAESRLRAAL 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW------SFGPKLYLPIFDKGKIKSN 343 A A+ YPSLSL+ S+ N+ + W + G L LP + + Sbjct: 303 AGYDAARLRFYPSLSLDASL-----NAGSQAFSQWFSDPIRTVGGALALPFIQWNTRQLS 357 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I++ + ++ I ++ T A+ EV+ A+ + + +L ++ L ++ ++L+ Sbjct: 358 IKQGDLEVKQAAIAFRSTAYAALAEVDEAMENRLSAWEQRARLHQSLALSQQRLTLTESR 417 Query: 404 YRQGRY---SLL----DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 YR G +LL D+L +E A A+ + D A Q L++A G G Sbjct: 418 YRAGAVDFRTLLDAQDDLLTLENALAQTQYDYLYATMQ-------LWLAQGGG 463 >gi|152995478|ref|YP_001340313.1| RND efflux system outer membrane lipoprotein [Marinomonas sp. MWYL1] gi|150836402|gb|ABR70378.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinomonas sp. MWYL1] Length = 459 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 98/472 (20%), Positives = 213/472 (45%), Gaps = 48/472 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQF--SIGNSKNLINIDTLKWWESFN--- 57 LR + LF+VL LA C+ + H L Q +I N K W++ + Sbjct: 6 LRYLGLLFVVLTLAACSSNE--PRKHFASLAQQELDAISNKKT-------SQWDALDTVA 56 Query: 58 ----------DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D L++L+K AL+ N I + ++ + S ++ PS AS+S + Sbjct: 57 PASYLTDLIQDPVLDELIKTALESNPNIQSTLLTLQSSLWELKSTQSSQLPSVDASVSSK 116 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYID 166 + TN + ++ W++D++G+ + E + + L S A ++ +++ ++ +++ Sbjct: 117 KSKDSDTNYSADINVSWQLDVWGKLANTEQAASKTLASDEALYQASRDTLVANVMKTWLS 176 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGA-------TSKLSLVKLEAEIKSIESDI 219 + I+I Q L+L + N +L +F G ++ S + A + + D+ Sbjct: 177 LTAKQHAINIEQQRLELLESNEKLIIQRFKNGLDNLEKMDEARTSTSQSRANLVEYKEDL 236 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 T ++ ++ V L P ++ P + + ++ +P ++ RPD++ Sbjct: 237 ETQKRELKLLVGTAEPLALAPNIDY------------PRVSLTLD-ELPNQSLQRRPDLK 283 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDK 337 + + K +A ++ PS++L+ +++ + D+ T WS +L P++ Sbjct: 284 SAYLSIEAADLKTTLAYKNMLPSINLSAALSQSADSPRVALFTSPVWSLMTQLTQPLYQG 343 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 GK+K+ A+ + + Y ++ T+L A+ EV+NA+ ++ V+ ++ A+E + ++ Sbjct: 344 GKLKAEREIAKLNTAKAYQAYRNTLLTAVNEVDNAIGQEKVLQQQVSHIREALESSRSNL 403 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + YR G L D++ ++ T +E L + + L +A+G G Sbjct: 404 AQYQKKYRSGLVQLSDLIAAQKTTFDLEAQLDKLIFNHLSNRITLGVALGLG 455 >gi|332187068|ref|ZP_08388808.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gi|332012768|gb|EGI54833.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 528 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/331 (21%), Positives = 150/331 (45%), Gaps = 11/331 (3%) Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAHQI 180 +++DLFG+ R + A LD +A A+ L ++ + ++++ + ++IA Sbjct: 182 FELDLFGRIRSLTG--AALDRYFATEAAARATRLTLVGDIAEAWLNYGADQSLLAIARDT 239 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++++ L+ + G + L + E + + ++D+ + +V+ + L+G P Sbjct: 240 AASAQRSVTLTRARLEGGIAPRTDLRQAEQVLATAQADLAQQTTAVAQDVNALQLLVGAP 299 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 L + K + P + + G+ + ++ RPD+ E +L + A+IG A++ L+ Sbjct: 300 IDTAL--LPKSIDEASPTIAT-LPAGLDSGILLRRPDVVQAEYELRAANAQIGAARAALF 356 Query: 301 PSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P +SL G + + F G + ++S P + PIF G +N+R +E+ T Sbjct: 357 PRISLTGLVGFASTALSSLFSGGSFNYSVAPSVSYPIFQAGAGVANVRYSEAQRDALLAT 416 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +++ + A +E +AL + + + + L+ +YR G L+ LD Sbjct: 417 YEKAIQTAFQETADALARQGTIADQLGANRRFLIAAADTYRLTEASYRGGVTPFLNTLDA 476 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +R+ + L + A + V LY +G Sbjct: 477 QRSLYSAQRTLIATQLVAANNRVTLYRVLGG 507 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 1 MNILRAIFSLFIVL--LAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWES 55 M IL +L + L+ C++ P+Y +P P +P + +G++ ++ + T+++ + Sbjct: 1 MRILSPFPALLLTATALSACSMAPKYERPATP-VPPSWPVGDAYLRQSEAALPTVRYTDI 59 Query: 56 FNDTSLNKLVKIALQQN 72 F D L +L++ AL N Sbjct: 60 FRDARLQRLIEQALVNN 76 >gi|295688195|ref|YP_003591888.1| NodT family RND efflux system outer membrane lipoprotein [Caulobacter segnis ATCC 21756] gi|295430098|gb|ADG09270.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter segnis ATCC 21756] Length = 496 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 103/456 (22%), Positives = 184/456 (40%), Gaps = 48/456 (10%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ------NLTILQATERINAA 85 LPT + +L +WW F+D LN LV AL Q L+ + Sbjct: 44 LPTAYEAPAGTSLPAEALDQWWTRFDDPVLNDLVTTALAQAPDARLAAARLEEARAVRQG 103 Query: 86 KENILSVRADLFPSSYASISHRFIPNLKTNSTGQ----------LDSDWKIDLFGQRRHI 135 + L + + S I T Q D W++DL G+RR Sbjct: 104 QIRQLYIPSTPLTGSAQRTDTDIIDQSGTGGFTQGGVSKTYSANFDVSWELDLIGRRRAA 163 Query: 136 ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHF-------KERISIAHQILDLYKKN 187 + N L +A + A+ + + + SY +AR + ++ IA + D+ + Sbjct: 164 RRVVDNDLAAARFSYEGARAALAANVAQSYFEARGYAVQLEDARQNARIAQGLYDVAAEK 223 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV-HNISTLLGYPATEFLH 246 ++G + L + +A++ +E+ + T +S + V + L P T L Sbjct: 224 GRRGLSATSEGERTAADLAQAQAQVAQLEAQLQTARRSLLILVGKGVDPLATLPITPVLA 283 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 PI P +L+ RPD+R +LA + + + + L+P+L+L Sbjct: 284 KTP------------PIPAAAPGELLARRPDVREAAARLASASGNLNVNELALFPTLTLT 331 Query: 307 GSIALTHDNSFPGY----------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 + L+ S P + ++ W+ G L +P+ D K+ S+I+ + ++ I Sbjct: 332 PGVGLSKSVS-PSFLQQGASTSTTSSAWTIGANLSIPVLDIPKLLSDIKAQGARVEQAAI 390 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 T+++TV A E ENAL ++ D++ V L+ + S Y G L L Sbjct: 391 TYEQTVQQAFGEAENALVQLDADQRRVALLEAGERRAAVAYEASRKGYAAGLTDLTTALQ 450 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E++ L+ A+ Q + V Y A+G G++P Sbjct: 451 AEQSWRGARTALTGAQTQALQRAVQTYKALGGGWSP 486 >gi|78066358|ref|YP_369127.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77967103|gb|ABB08483.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 482 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/417 (19%), Positives = 171/417 (41%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW + NDT L+ L+ AL N + A R A+ ++ +A P ++ + R Sbjct: 53 WWRALNDTQLSALIDEALAGNPDLATADARAREAQALVIEAQAARLPHLVGRGSAKAERL 112 Query: 109 IPNLKTNSTG----------QLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 ++ G L W +DL+G RR E++L +A A++ + Sbjct: 113 SGTQFSSGEGGGFFSHTREITLGLSWDLDLWGSRRAAWEAALGEARAAQVDAQAARVLLS 172 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y++ + ++ +A + + + L+ + T+G + + E+E+ + Sbjct: 173 VNVARAYVNLAYAFDQQDLARAEYERADEALTLTRQRVTKGIDNVAQQRQAESEVAAATR 232 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ ++ LLG L ++ + + +PA L+ R D Sbjct: 233 EQARTAQAVDSARIALAILLGAGPDRGLALVRPAPLP---AAALAVPADLPAALLGRRAD 289 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 + ++ + + A++D P++SL I L F + ++ P + LPI Sbjct: 290 LVAARWRVEAASRNVAAARADFLPNVSLTALIGLATRGGASLFQAASRTYNASPAVSLPI 349 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + +RR ++ + +T++ AI EV + L ++ Q A + Sbjct: 350 FDGGERRGVLRRRDAQYDLAVAGYNKTLIGAIGEVADDLHRLHSLAVQTDAQQRAFDSAT 409 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR G S LD L + + +++ + Q A + L A+G G+ Sbjct: 410 DAWRLADARYRAGVGSYLDALVVRQQLLVASREVAALRAQRADQSLQLVAALGGGFR 466 >gi|296272354|ref|YP_003654985.1| NodT family RND efflux system outer membrane lipoprotein [Arcobacter nitrofigilis DSM 7299] gi|296096528|gb|ADG92478.1| RND efflux system, outer membrane lipoprotein, NodT family [Arcobacter nitrofigilis DSM 7299] Length = 462 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 104/427 (24%), Positives = 193/427 (45%), Gaps = 46/427 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF--NDTSL---------NKLV 65 GC++ PE + ++P +F KN WE F ND N+ + Sbjct: 16 GCSLKPEIAYNN-SIIPPKFKNAVDKNTKVEYIQPKWEDFVKNDKLKKLIKLALENNRDL 74 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS--------T 117 KI++ N+ +AT RI +K FPS A ++ N+ +N+ + Sbjct: 75 KISIL-NIESARATYRIEKSK---------YFPSIEAKANNTNSRNITSNNNTEISRTYS 124 Query: 118 GQLDSDWKIDLFGQRRH-----IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + + +++DLFG+ R+ ++S LA + YA K+++IS++I S+ E Sbjct: 125 SKFGASYELDLFGKIRNSNDFALQSYLA---TKYATT-ATKISLISEVINSWNTLCANIE 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ I + ++ + EL+ KF G + + +K E + + N + Sbjct: 181 QLKILEKSIENLTLSYELTQKKFDMGIALIDDALSAKTSLKEAEVTLLNQKTIIEKNKNT 240 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L+ + L + N L P GI + ++ +RPDI E L A I Sbjct: 241 LELLVSTTIPKNLIPSGFEENEKSLMLIQP---GISSKVLFSRPDIIQAEYNLKAKNANI 297 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+A++ +PS+SL L ++ +N T WSF P + LPIF G+ +N+ A+ Sbjct: 298 GVARAAFFPSISLTADYGLASNSLSSLFNGNSKTVWSFIPSINLPIFKGGENMANLDYAK 357 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +++T+ +A K+V +AL+ + K + + V KKS +S+ +Y+ G Sbjct: 358 AQQKIALAQYEKTIQSAFKDVSDALSERSNITKQLKAQKDLVNTAKKSYDISLNSYKYGL 417 Query: 409 YSLLDIL 415 + L++L Sbjct: 418 GNYLNVL 424 >gi|238784141|ref|ZP_04628155.1| outer-membrane efflux lipoprotein [Yersinia bercovieri ATCC 43970] gi|238714987|gb|EEQ06985.1| outer-membrane efflux lipoprotein [Yersinia bercovieri ATCC 43970] Length = 459 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/454 (19%), Positives = 193/454 (42%), Gaps = 25/454 (5%) Query: 11 FIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +LL GC + +Y +P + + P ++ + S ++ WWE+F+D L++ + Sbjct: 1 MALLLTGCGSLLKSDYQRPMLSV-PDEWRVKESGGGYLNHSVHWWENFDDPQLSESINRM 59 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDS 122 L N + A ++ A+ ++ P+ S + L N+ + L Sbjct: 60 LLSNNDLAAAGLKLQQARLTAGLTNTNMTPNVTLSGAGSNTRALNENTQPRESYSTSLGL 119 Query: 123 DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 +++DL+G+ R E S +++ L++I Y F +++ L Sbjct: 120 SYELDLWGKLARAREQSAWLVNATEQDRQETALSLIGTTADLYWQIAKFNQQLGYQQAAL 179 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + + + + + G S++ L++ + + ++ LE+ R N LL A Sbjct: 180 AISQDTLNMVQSRLAAGDASEIELLQAQQTLLDRQNQYQNLEQQ-REAARNAMALLFNRA 238 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + Y Q + ++ +PI +P +I RPD++ E +L ++A +AK + YP Sbjct: 239 PD---YRQAERHSLDLQQQVPIAESLPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYP 295 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQY 355 +LSL ++ ++ + W P LP ++ I +++ Q Sbjct: 296 TLSLGATL-----DAGSAVFSQWFSNPSRTLSASGALPFLQWNSVQLTIDQSKLEVQLAA 350 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + ++ V +A+K+V++A+ +K ++L ++ +SL+ Y+ G S +L Sbjct: 351 VDFRRKVYSALKDVDDAMMQRLSYQKQKQNQWQNLQLSQRRLSLTNSQYQAGAISFQTLL 410 Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 D + A E L + + + L++A+G G Sbjct: 411 DAQDALLTSETSLLELQYNYLNATMKLWLALGGG 444 >gi|301156175|emb|CBW15646.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 455 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/393 (20%), Positives = 167/393 (42%), Gaps = 39/393 (9%) Query: 15 LAGCT-VGPEYTKPHMPL-----LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 LAGC +G Y + QF++ + WW +ND+ LN++V+ A Sbjct: 17 LAGCANIGDSYKASQQDYQNYAEITKQFNVKEN----------WWALYNDSQLNRVVEQA 66 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------GQLDS 122 L N + +A+ +N A N A+L P+ S N+KT G L+ Sbjct: 67 LVNNKDLAKASVAVNRALYNANLAGANLIPAFSGSTQSSASKNVKTGGNSAVSHQGALNV 126 Query: 123 DWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 + +DL+ + + A A+ ++ KL++I+ ++ +Y + + IS + + Sbjct: 127 SYTLDLWQRLADTADAAEWSHKATAEDLEATKLSLINSVVTTYYQIAYLNDAISTTEETI 186 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y + + +QG S+ + + + + +++ + + + LL Sbjct: 187 KYYNDISSIMQRRLSQGVADSASVDQSQQAVLTARNNLINYQTQRKTAEQTLRNLLNLKP 246 Query: 242 TEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 E L+ NF P++ + +N+ +P +I NRPD++ + +L+ + + Sbjct: 247 EEALNI------NF-PHILNVKNVGVNLNVPVSVIANRPDVKGYQYRLSSAFKNAKATEK 299 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY---LPIFDKGKIKSNIRRAESSAQEQ 354 +P ++L GS LT + G H G L LP + +K N++ +E+ + Sbjct: 300 GWFPEVTLGGS--LTSSGTKVGNALHNPVGTGLIGISLPFLNWNTVKWNVKISEADYETA 357 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + +++++ A+ +V+ + + + LQ Sbjct: 358 RLNYEQSITKALNDVDTNYFAYTQAQSAFANLQ 390 >gi|281422481|ref|ZP_06253480.1| multidrug resistance protein, FusA/NodT family [Prevotella copri DSM 18205] gi|281403464|gb|EFB34144.1| multidrug resistance protein, FusA/NodT family [Prevotella copri DSM 18205] Length = 464 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 153/354 (43%), Gaps = 52/354 (14%) Query: 122 SDWKIDLFG----QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 + W +DLFG Q+R + +L L V K N+I+ + Y +++ + Sbjct: 135 ASWMVDLFGNLLSQKRSAQMALLQLQDYQVSV---KTNLIANIANMYYTLLMLDKQVELV 191 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT-------LEKSFRMNV 230 + + L K E T L L I+S ES+ + L + R Sbjct: 192 NNMEGLTKDTWE------TMQKMHDLRLGYRTPAIQSAESNYYSVLTQKTDLLRQIRETE 245 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADLIRNRPDIRYQEKKLADS 288 +++S L+G A H + + + Q +P N G+ L+ NR D+ E LA Sbjct: 246 NSLSLLIGDQA----HSIARGKLDNQS---LPSNFSTGVGIQLLNNRADVHAAEMNLAQC 298 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHW--SFGPKLYLPIFDKGKIKS 342 + A+S YPS++++G+ A T+ PG W S L PIF G+I + Sbjct: 299 FYGVETARSKFYPSITISGTGAFTNSAGMGIVNPG---KWLLSAVGSLTQPIFQNGRIIA 355 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---EDKKIVTK----LQHAVELHKK 395 ++ A+ ++ Y TWQ TVL A EV NAL N E KI K L+ VE K+ Sbjct: 356 GLKVAKMQYEQAYNTWQNTVLKAGSEVSNALVLYNYSDEKSKIEQKRIEVLEKNVESTKE 415 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 M ++ +Y L+I+ + + V++ ++ V+LY A+G G Sbjct: 416 LMGIAGSSY-------LEIIQAQSSLLNVQLSKVADDFNKMQAVVNLYYALGGG 462 >gi|161505251|ref|YP_001572363.1| putative outer membrane efflux protein MdtP [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866598|gb|ABX23221.1| hypothetical protein SARI_03389 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 479 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 94/472 (19%), Positives = 202/472 (42%), Gaps = 49/472 (10%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQN 72 L+GC + E T H L P + N +L + +WW FND LN L++ L + Sbjct: 20 LSGCALIREDTAAHQQLQPENSQLANDIHLASSGWPQAQWWRQFNDPQLNALIQQTLSGS 79 Query: 73 LTILQAT--ERINAAKENILSVRADLFPSSYASISHR------FI-------PNLK---- 113 T+ +A E+ + ++ +L + L ++ ++ + F+ P L Sbjct: 80 HTLAEAKLREKKSQSQAELLEAGSQLQVAALGMLNRQRASANGFLGPYALDAPKLGMDGP 139 Query: 114 --TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T +T L + +D +G R + +++ ++A A+ +L++ + + Y + Sbjct: 140 YYTEATIGLFAGIDLDFWGVHRSAVAAAIGAQNAALAETAAVELSLTTGVAQLYYSMQAS 199 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + Q D+ I+ K G +K+ A++ +++ I ++ + Sbjct: 200 YQMLDLLQQTRDVVDYAIQAHQSKVAHGLEAKVPYHGARAQMLAVDKQIAAVKGQIKETR 259 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGIPA----DLIRNRPDIRYQEKKL 285 ++ L+G A + + +P +N GIP+ +L+ RPD++ + Sbjct: 260 ESLRALMGVEAMPDIK-----------SASLPQVNTGIPSTLSYELLARRPDLQAMRWYV 308 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 S+ ++ A++ YPS + L D+ F + +F P L LP+FD G++ + Sbjct: 309 QASLNQVDAARALFYPSFDIKAFFGLDSIHLDSLFKNTSKQINFIPGLRLPLFDGGRLNA 368 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMSL 399 N+ +++ + ++VLNA+++V L ++N+++ + + A + S Sbjct: 369 NLASTRAASNILIERYNQSVLNAVRDVAINGARLQTLNDERDMQVQRVDATRYTQASAEA 428 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ +QG S L + +V L + Q + L ++G GY Sbjct: 429 AL---KQGLGSRLQATEARLPVLSEQVSLLMLDTQRIIQSIQLIKSLGGGYQ 477 >gi|325918267|ref|ZP_08180410.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325535547|gb|EGD07400.1| outer membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 182 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 7/171 (4%) Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 +A + A+IG+A ++LYP + L GSI T D P TH WSFGP + + G Sbjct: 1 MAAATARIGVATAELYPDIRLGGSIGATGLLADFGEPA--THAWSFGPLISWTLPSSGA- 57 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ +R E+ A + TVL A++EV+ L+ +D + L+ A + + + S + Sbjct: 58 RARVRATEAGADAALAQFDHTVLQALREVQTTLSRYAQDLDRLHLLEQAQQQAELASSQN 117 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + GR L LD ER A ++ L+ A+ Q+++ + L++A+G G++ Sbjct: 118 RRLCQGGRTPYLSSLDAERTLATADMTLANAQAQVSQDQIQLFLALGGGWD 168 >gi|260223049|emb|CBA33223.1| Outer membrane protein oprM [Curvibacter putative symbiont of Hydra magnipapillata] Length = 430 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 3/189 (1%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNT 322 G+P++L+ RPD+R E+ L A IG A++ +P ++L S + D F + Sbjct: 231 GVPSELLVRRPDVRQAEQNLLALNANIGAARAAFFPRITLTASAGVASSDLDTLFSNGTS 290 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+F P+L +PIFD G+ K+N+ A+ + +++ + KEV +AL + Sbjct: 291 AWTFVPQLLMPIFDAGRNKANLEAAKVNKDIAIAQYEKAIQTGFKEVADALAGRATLGEQ 350 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + + +M L+ + ++ G S ++L+ +R+ + + Q ++ V L Sbjct: 351 LQAQTAQLVATQTTMQLTDLRFKAGAASSFEVLEAQRSLFAAQQAQVQVQTQQLQNLVTL 410 Query: 443 YIAIGSGYN 451 Y +G G+ Sbjct: 411 YKVLGGGWT 419 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIG-------NSKNLINIDTLKWWESFNDTSLNKLVKI 67 LAGC+ P +T+P P+ P + ++K +I+ W F D L +L+++ Sbjct: 33 LAGCSFIPTFTRPAAPVAPAFPQVAVASTPTADAKAAADIE---WQSFFKDARLKRLIEL 89 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP----NLKTNSTGQLD-S 122 +L+ N + A I A + + RAD P+ A I+ P + ++ T L + Sbjct: 90 SLENNRDLRVAALNIEATRAKLQVARADQLPTVNAGINGSRGPAASGAITSSYTAGLSVT 149 Query: 123 DWKIDLFGQRRHI 135 +++D FG+ R + Sbjct: 150 AYELDFFGRVRAL 162 >gi|293392240|ref|ZP_06636574.1| putative TdeA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952774|gb|EFE02893.1| putative TdeA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 457 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/402 (20%), Positives = 171/402 (42%), Gaps = 40/402 (9%) Query: 8 FSLFIVL---LAGCT-VGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWWESFND 58 +L IV+ L GC +G Y + Q++I N WW+ + D Sbjct: 7 LTLTIVVATTLTGCANIGDSYRASLKNYKQYEEITKQYNIKND----------WWKLYKD 56 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-- 116 LN++V+ AL N + +A +N A + A+L P+ S N+KT Sbjct: 57 AQLNRVVEKALLNNKDLAKAAVSVNRALYSANLAGANLVPAFSGSTRSTAQKNIKTGGNS 116 Query: 117 ----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-VDIAKLNVISKLIPSYIDARHFK 171 TG L+ + +DL+ + + A Q ++ KL++I+ ++ +Y + Sbjct: 117 TISHTGSLNVSYTLDLWFRLADTADAAEWTHKATVQDMESTKLSLINSVVTTYYQIAYLN 176 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + IS + + Y + + QG +S+ + + + + +++ T + + + Sbjct: 177 DAISTTKESIKYYTDISNIMRNRLAQGVADSISVDQAQQAVLTARNNLITYQLNRKTAEQ 236 Query: 232 NISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + LL E F H ++ +S + +N+ +P +I NRPDI+ + +L+ Sbjct: 237 TLRNLLNLKPDETLKITFPHILKVKS--------VGVNLNVPVSVIANRPDIKGYQARLS 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIR 345 + + + +P ++L GS+ + NT G + LP + +K N++ Sbjct: 289 SAFKNVKATEKSWFPEITLGGSLNSSGKKLNSATNTLIGGGALGISLPFLNWNTVKWNVK 348 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +E+ + + +++++ A+ +V+ S + KK T Q Sbjct: 349 ISEADYETARLNYEKSITVALNDVDTNYFSFTQAKKRFTNAQ 390 >gi|317050117|ref|YP_004117765.1| RND efflux system outer membrane lipoprotein [Pantoea sp. At-9b] gi|316951734|gb|ADU71209.1| RND efflux system, outer membrane lipoprotein, NodT family [Pantoea sp. At-9b] Length = 473 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/416 (20%), Positives = 182/416 (43%), Gaps = 19/416 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRF 108 +WW+SF+D LN L+ A+ + + + + A +++ A+ +P A I+ Sbjct: 52 QWWQSFDDAQLNHLINDAMAASPDLQVVNAQADKANAQVIAANAERYPDVDLNAGITRSR 111 Query: 109 IPNL-------KTNST---GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + + KT ST + + DL+G ++ E++L ++ ++L + Sbjct: 112 VAKVDDPLLQGKTYSTLRTANVGLSYTFDLWGGKKDAAEAALGQARASKLDRQASQLTLA 171 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + ++ + +A Q D ++ + G TS + +E K+ E+ Sbjct: 172 ANVTRAWNNLNLAWTNADLAKQAADRANGIAKIQQQYVSAGLTSDYQYKQALSEQKTAEA 231 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ +STL+G ++ H ++ N +P +I PADL+ RPD Sbjct: 232 TLTEAKQDVTDAGIQLSTLVG-KGPDYWHNLKPAKLNVPTAALLPGSI--PADLLGRRPD 288 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 + ++ + I K++ YP+++L G+ +L D F + ++ GP L LPI Sbjct: 289 VVAARWRVEAAAKDIAATKTEFYPNINLVAEAGTRSLLGDALFGAPSRFFNVGPSLSLPI 348 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD GK ++++ ++++ + + +++++ V + +T + + + + + A +L Sbjct: 349 FDAGKRRADLAESDANWDLAVAQYNKLLISSLGNVSDTITQLQSIQDQLAQQESANQLIH 408 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Y G LD+L I+ + + L K Q V L +G G+ Sbjct: 409 SAWDDLNREYAAGLRPYLDVLTIQNQLIESDQKLVALKAQQINLAVVLIEDLGGGF 464 >gi|124382370|ref|YP_001023968.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei NCTC 10229] Length = 413 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/398 (22%), Positives = 174/398 (43%), Gaps = 33/398 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALSLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKL 160 L+ + ++S ++IDLFG+ R + + L + A+ + +++++++ Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRSV-HISLVAEV 189 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y+ + +++A L + ++ H GA ++L + + ++++ Sbjct: 190 ANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQVQTARVAAE 249 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + ++ L+G P + + L G+P+ L+ RPDI Sbjct: 250 QYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDR---ALLAEFPAGLPSTLLERRPDIMA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +P ++L G++ + S G W F P+L LPIF+ Sbjct: 307 AEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFVPQLTLPIFNA 365 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 G ++N+ A ++ T+ +A +EV + L + Sbjct: 366 GSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAA 403 >gi|302189716|ref|ZP_07266389.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae 642] Length = 495 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/399 (22%), Positives = 173/399 (43%), Gaps = 32/399 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI----GNSKNLINIDTLK---WWESFN 57 R + L I++++GC++ P Y +P +P+ Q S N+ + + + E Sbjct: 17 RCLAMLAILIVSGCSLIPAYQRPVLPVPVDQASAVVPASNTSTALVLSADEEALAGELSP 76 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH----------- 106 L +L++ AL N A R+ A+ RAD FP+ A + Sbjct: 77 KGELRRLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAAD 136 Query: 107 -RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPS 163 R+ ++ S G SD+++D FG+ R + + + L S + Q A+ +I+++ + Sbjct: 137 ERYGQDISIASVGV--SDFELDFFGRVRSLSEAARHDYLASTFGQ-QAARSALIAEVARA 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 ++ R A + + + ++ + + QGA S+ L+ + + + + Sbjct: 194 WLAERLAAAVQQDAQAVQEARQMLVKAAEEQQRQGAISQDDLLVQRLDTLTAQQQVQDAA 253 Query: 224 KSFRMNVHNISTLLGY----PATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDI 278 + L GY PAT+ + P + +P+ + R DI Sbjct: 254 SDHANASQALLLLTGYSTALPATKPEATTPDMPALTAALVETPAWLSNLPSQRLLERFDI 313 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIF 335 R +E+ L S A IG A++ +PS+ L+ + L D+ F + W F P+L LP+F Sbjct: 314 RQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLF 373 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 D G+ ++N+ A+ Q +++ V NA +E+ LT Sbjct: 374 DGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 412 >gi|42406461|emb|CAF25097.1| putative outer membrane efflux protein [Yersinia enterocolitica] gi|318607352|emb|CBY28850.1| rnd efflux system, outer membrane lipoprotein CmeC [Yersinia enterocolitica subsp. palearctica Y11] Length = 404 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 3/196 (1%) Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHD 314 P + + +G+ +D++ NRPD+ E KL + A IG A++ +PS++L +G + + Sbjct: 202 PQVIKAVPVGLSSDVLLNRPDVLATEHKLKSANANIGAARAAFFPSVTLTASGGVGSSAL 261 Query: 315 NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 ++ WSF P + LPIFD G ++ + +++ +++ + A KEV +AL Sbjct: 262 STLLSEGAGIWSFAPAITLPIFDGGANQAALDYSQAQKNGYIAAYEKAIQTAFKEVADAL 321 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ + Q V ++S L+ Y+QG + L++LD +R + L ++ Sbjct: 322 ARKATIQEQLAAQQAYVAAAQESFELAQKRYKQGIDTYLNMLDAQRTLYSAQASLITEQQ 381 Query: 434 QLAKSYVDLYIAIGSG 449 A + + LY +G G Sbjct: 382 TQANNMITLYKVLGGG 397 >gi|255532151|ref|YP_003092523.1| NodT family RND efflux system outer membrane lipoprotein [Pedobacter heparinus DSM 2366] gi|255345135|gb|ACU04461.1| RND efflux system, outer membrane lipoprotein, NodT family [Pedobacter heparinus DSM 2366] Length = 469 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 102/468 (21%), Positives = 202/468 (43%), Gaps = 43/468 (9%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 I +L GC V + P + P F + ++I + F + L L+ AL + Sbjct: 14 ISILGGCKVSKDIPVPKTAI-PEHFRNAERTDSLSIGNQAIVDFFPEKELRNLIDTALIR 72 Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG------------- 118 N + A + I + + + + P I+ + G Sbjct: 73 NYDLQIAIKNIESTSQLLKQAKLGNLPQLNLQITGSSNNPSNNSINGLSTSEFLKTSHIE 132 Query: 119 ----QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS----YIDARH 169 L W+ D++G+ R + +LA Y Q + A+ V ++LI S Y Sbjct: 133 DFNASLGLTWEADIWGKIRSQKQGALAT----YLQTEEARKTVQTQLIASIAQGYYRLLM 188 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +I IA + L L + + L+F G S L++ + +A+ IP L++ + Sbjct: 189 MDAQIGIAKKNLALSDSTLTIVKLQFDAGQVSSLAIQQAQAQQLVSAQLIPKLQQDITIQ 248 Query: 230 VHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + +S L G P + F P+ + G P+ ++ RPD++ E L + Sbjct: 249 ENALSMLTGRIPGA--IDRKTSLDKTFIPD---KPSAGYPSAMVSKRPDVKSAELSLDIA 303 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPG---YNTHWS-FG---PKLYLPIFDKGKIK 341 AK+G+AK+ +YP+L++ + + NSF +N S FG L P+ + ++K Sbjct: 304 NAKVGVAKAGMYPTLNITATGGV---NSFKASNWFNVPASLFGMVSGGLTQPLLQRRQLK 360 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + A+ ++ I +++ VLNA+ EV + L I + K ++ V ++++ + Sbjct: 361 TQYEIAKIDREKTVIQFRQAVLNAVTEVSDELVKIEKLKLQYDISRNRVNTLQQAVRNAN 420 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + ++ G + L+++ + + + E++L+ K + V+LY ++G G Sbjct: 421 MLFKSGMATYLEVITAQSNSLQSELELAAIKTAQLSATVELYRSLGGG 468 >gi|332160088|ref|YP_004296665.1| putative outer membrane efflux protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664318|gb|ADZ40962.1| Putative outer membrane efflux protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862015|emb|CBX72183.1| outer membrane protein oprM [Yersinia enterocolitica W22703] Length = 404 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 3/196 (1%) Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIALTHD 314 P + + +G+ +D++ NRPD+ E KL + A IG A++ +PS++L +G + + Sbjct: 202 PQVIKAVPVGLSSDVLLNRPDVLATEHKLKSANANIGAARAAFFPSVTLTASGGVGSSAL 261 Query: 315 NSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 ++ WSF P + LPIFD G ++ + +++ +++ + A KEV +AL Sbjct: 262 STLLSEGAGIWSFAPAITLPIFDGGANQAALDYSQAQKNGYIAAYEKAIQTAFKEVADAL 321 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ + Q V ++S L+ Y+QG + L++LD +R + L ++ Sbjct: 322 ARKATIQEQLAAQQAYVAAAQESFELAQKRYKQGIDTYLNMLDAQRTLYSAQASLITEQQ 381 Query: 434 QLAKSYVDLYIAIGSG 449 A + + LY +G G Sbjct: 382 TQANNMITLYKVLGGG 397 >gi|290511273|ref|ZP_06550642.1| multidrug resistance outer membrane protein MdtP [Klebsiella sp. 1_1_55] gi|289776266|gb|EFD84265.1| multidrug resistance outer membrane protein MdtP [Klebsiella sp. 1_1_55] Length = 482 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 91/464 (19%), Positives = 197/464 (42%), Gaps = 36/464 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 +GC + + + P Q + +L N D +WWE+++D LN L+ ALQ + Sbjct: 23 SGCALIQDEPSQVAIVNPQQAQLAQVIHLANSDWPAARWWEAYDDPQLNMLINRALQNSP 82 Query: 74 TILQATERINAAKENILSVRADL---------------------FPSSYASISHRFIPNL 112 T+ A RI+ ++ + R+ + +P SY+ + P Sbjct: 83 TMQAARLRISQSQSTVELARSAMGLQATAVAAQNRLRITDKSFSWPYSYSLPVDKNGPWY 142 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+ G + + IDL+G R + +++ ++ A+ +L++ S + Y + Sbjct: 143 TLNTVG-VGAQLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQLYFAMQATF 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I++ ++ + + ++ + +G + + AE + I + E Sbjct: 202 QKIALLQELEGIAQFSVAAHEHRTQRGVEDSVDVANARAEQLAARQQIISAEGMLTQYRE 261 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A +H + P L + + +L+ RPD++ + S+ Sbjct: 262 TLRALIGADAQSMPAIHPVAL------PALQETLPSSLSFELLARRPDLQALRGYVTASL 315 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +++ AK+ YP + G AL+ + F + P LYLPIFD G++ +N++ Sbjct: 316 SQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLYLPIFDGGRLNANLQS 375 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + + VL+A+++V + + +N+ + Q V + + + +Y++ Sbjct: 376 VRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVTAAQTTTDSARAHYQR 435 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S + RA ++ L + Q + + L A+G GY Sbjct: 436 GLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGY 479 >gi|171915146|ref|ZP_02930616.1| Outer membrane efflux protein [Verrucomicrobium spinosum DSM 4136] Length = 411 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 93/416 (22%), Positives = 194/416 (46%), Gaps = 29/416 (6%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISH 106 F+D L +LV++AL++N + A R+ A+ + A+L+P + ++ Sbjct: 4 FDDPDLQRLVRLALERNHDLKAAANRVTQARAQAKAAGAELWPQVGVDFGGRRNQSASGQ 63 Query: 107 RFIPNLKTNSTGQLDSD--WKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIP 162 RF+ + ++ ++ +D W++DL+G+ R + + + AQ D+ A+L++ + Sbjct: 64 RFVGSGVRSNRFEMGADISWELDLWGRLRD-QRGASAAGAEAAQEDLYAAQLSLAGTTVK 122 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK---LSLVKLEAEIKSIESDI 219 S + + +I ++ + + + N+ + + +G ++ L + A++ E+ + Sbjct: 123 SALTLAETRAQIQLSEENIATRRINLGVLEKQLDRGIDTEQVALDVSLARADLARAEATL 182 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ + LLG YPA ++ P + + G+P++++ RPD+ Sbjct: 183 ASRKREADEARRGLELLLGAYPAG------KEHGVADLPGMRKNVPAGLPSEMLLRRPDL 236 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIF 335 R E++L ++ AK PS SL GS L+ D WS + +F Sbjct: 237 RAMERRLESALRSESGAKKAFLPSFSLTGSGGLSSDELSLLLQREAVVWSLAGSVAQQVF 296 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G++++N A + E T+ L A KEVE AL + K+ + L A ++ Sbjct: 297 QGGRLRANAEEARARYDEILSTYSGRALQAFKEVEGALAAEIYLKEQESALTTAAAEAER 356 Query: 396 SMSLSMINYRQGRYSLLDILDI-ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ L++ Y +G L +LD +RA L++ +L ++ VDL++A+G + Sbjct: 357 AVELAISRYSRGLSDALTVLDSRQRAFDARSALLAVQALRL-RNRVDLHLALGGSF 411 >gi|293602952|ref|ZP_06685391.1| NodT family RND efflux system, outer membrane lipoprotein [Achromobacter piechaudii ATCC 43553] gi|292818746|gb|EFF77788.1| NodT family RND efflux system, outer membrane lipoprotein [Achromobacter piechaudii ATCC 43553] Length = 519 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/413 (20%), Positives = 176/413 (42%), Gaps = 24/413 (5%) Query: 53 WESFNDT-SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W F + +L L+ AL N+ + A R+ A A L P+ I R + Sbjct: 62 WAGFPQSGTLQALIDEALANNVDLRVAASRMQQAAHQARLAGASLLPT--VGIGARAATD 119 Query: 112 LKTNSTGQLDS-----DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYI 165 S + +W+IDL+G+ R + + +A S+ A A+ ++ + S++ Sbjct: 120 PTPGSAFSANGYAVLMNWEIDLWGRARAEKLAGMAGYRSSEADYAYARQSIGALTARSWL 179 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 A ++++A + + + ++L + G ++ + + ++ + + E + Sbjct: 180 AALEASAQLALARDLQTMTGEQLKLIEYRRRIGKVGEVEVAQWSEQVAAAADVVAQRELA 239 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + +LG YPA +N P+ P+ G+P L+ RPD+ ++ Sbjct: 240 RMQALRALELILGRYPAGV------ADANEPMPDSPAPLAPGLPLSLLDRRPDLVAARER 293 Query: 285 LADSVAKIGIAKSDLYPSLSL-NGSIALTHDNSFPGYNTH---WSF--GPKLYLPIFDKG 338 L + AK+ P++++ G+ T D + G T W + G L P+FD G Sbjct: 294 LVAAYYGAEEAKAARLPTIAIFAGAGRFTKD--YSGLATSMQSWVYPVGASLAWPLFDAG 351 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + + QE + +L A+ EVEN LT + +Q +++++ Sbjct: 352 RRQITLELRTEQQQEALALYARAILTAMGEVENGLTGEQQLAMREQSIQRQYAESRRALA 411 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L+ + G++ D+L +R +V+ DL + + V+L++A+G + Sbjct: 412 LAQAQRQIGQFDDFDVLQRKRDALRVQSDLLHVRAERLVQRVNLHLALGGRFG 464 >gi|115351686|ref|YP_773525.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115281674|gb|ABI87191.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 499 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/417 (20%), Positives = 172/417 (41%), Gaps = 20/417 (4%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-IP 110 WW + +D L+ L+ AL N + A R A+ ++ +A P S + P Sbjct: 70 WWRALHDPQLSALIDEALAGNPDLATADARAREAQALVIEAQAARVPHVVGRASAKGERP 129 Query: 111 NLKTNSTGQ------------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + STG+ L W +DL+G RR E++L +A A++ + Sbjct: 130 SGTQFSTGEGGGFFSHTREMNLGFSWDLDLWGGRRAAWEAALGEARAARVDARAARIMLS 189 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +Y++ + ++ +A + + + L+ + +G + + E+E+ + Sbjct: 190 VNVARAYVNLAYAFDQQDVARAEYERADEALTLTRQRVAKGIDNVAQQRQAESEVAAAAR 249 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ ++ LLG L + P + + +PA L+ R D Sbjct: 250 EQARAAQAIGSARIALAILLGAGPDRGLALARPAP---LPIAALAVPADLPATLLGRRAD 306 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 I ++ + + A++D P++SL I L F + +S GP + LPI Sbjct: 307 IVAARWRVEAASRNVAAARADFLPNVSLTALIGLATRGGASLFQAASRTYSVGPAVSLPI 366 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 FD G+ + +R+ ++ + +T++ AI EV + L ++ Q A++ Sbjct: 367 FDGGERRGVLRKRDAQYDLAVAGYNKTLIGAIGEVADDLHRLHSLAMQADAQQRALDSVT 426 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L+ YR G S LD L + + +++ + Q A + L A+G G+ Sbjct: 427 DAWRLADARYRAGVGSYLDALVVRQQLLVASREVAALRAQRADQSLQLVAALGGGFR 483 >gi|396415|gb|AAC43174.1| ORF_f488 [Escherichia coli str. K-12 substr. MG1655] Length = 488 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/473 (19%), Positives = 207/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWXQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++A ++A A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVAAAIAAHNAALAETAAVELSLATGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL--THDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L H ++ F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAE 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + E+ L + + + L ++G GY Sbjct: 431 AA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 480 >gi|326386602|ref|ZP_08208224.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] gi|326208917|gb|EGD59712.1| RND efflux system, outer membrane lipoprotein, NodT [Novosphingobium nitrogenifigens DSM 19370] Length = 452 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/420 (20%), Positives = 182/420 (43%), Gaps = 25/420 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 WW + D L L++ L+ + T+ +A R+ A+ S RA L P++ A+ + Sbjct: 36 WWRDYGDAQLTSLIEEGLKGSPTLAEAEARVRQAEGYARSARAALLPTASATGTIGGVKQ 95 Query: 106 -------HRFIP-NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 F+P +++G L+ + D FG+ R + +++ +A + A+L + Sbjct: 96 SYNNGYPREFVPHGWNDSASGALNVGYDFDFFGRNRATLRAAVGERTAAEIEAHAARLTL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y D + ++ L + ++ +L + G ++ + EA + + Sbjct: 156 ATSVAAAYADLGRYAALRDVSAASLRVREETAKLVTQRVINGLDTRAEQRQAEAAVPVAK 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF--QPNLYIPINIGIPADLIRN 274 +D+ E+S + + ++ LLG L F QP +P + + DL+ Sbjct: 216 ADLAAAEQSLMLTRNRLAALLGAGPDRGLAITPPAPGRFEMQP---LPPRLAL--DLVGR 270 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 R DI + + A++ A++ +P++++ G+ +L N G + + + Sbjct: 271 RADIAAARARAEAAAARVQAARAAYFPNVNIMAYIGAQSLGIANLTAGGSDNGQAQAAIT 330 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP+F G++ + R A E + +T++ A++EV +A + + AV Sbjct: 331 LPLFAGGRLAGDYRSARGGYDEAVALYDDTLVQAVREVADAAAGQKALDVELRSAREAVV 390 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ L+ Y G L +L E A + L+ + ++ V+L A+G G++ Sbjct: 391 RSEEAWDLAKRRYTGGLSPYLSVLSAEDALIRNRQLLADLEGRVLGVRVELVRALGGGFH 450 >gi|196229126|ref|ZP_03127991.1| RND efflux system, outer membrane lipoprotein, NodT family [Chthoniobacter flavus Ellin428] gi|196226358|gb|EDY20863.1| RND efflux system, outer membrane lipoprotein, NodT family [Chthoniobacter flavus Ellin428] Length = 496 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 103/492 (20%), Positives = 199/492 (40%), Gaps = 60/492 (12%) Query: 9 SLFIVLLAGCTV-----GPEYTKPHMP-LLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 S ++LAGC + G P + +P +S +++ + + W +F+D L Sbjct: 9 SAACLVLAGCAIKTPPTGANIMAPEVRHQIPGSWSGPHARGAVAPN---WIRNFHDPELT 65 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLK-------- 113 LV+ A+ +N + A + A++ I + L+P + + R L+ Sbjct: 66 ALVEDAIARNPDLKAAAANVEASRAAIRIAASSLYPRIALKGLGERQGRELRGDLGVGVD 125 Query: 114 --------------------TNSTGQ-------LDSDWKIDLFGQ-RRHIESSLANLDSA 145 T+S+ Q + + W++D++G+ R ++ A + Sbjct: 126 PPDLGSLGVDSSGGSGDTRTTDSSSQRWVYGLGVGASWELDVWGRIRSKKAAATAESGAL 185 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 A + A+ ++ + + +Y ++ + A + LDLY++ +L+ + QG S + Sbjct: 186 EADYEYARESLAAAVARAYFTTIEAAQQEANAKETLDLYQQYSKLTEQQKQQGHASDYDV 245 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPIN 264 ++ + + + + I + YPA + +F P + Sbjct: 246 AQIRSRTAGANDTYIAAQAARAQTIRAIEVVTSHYPAGKL-----ATRRDF-PGQPKSVP 299 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYN 321 G+PA L+ RPDI E++ A +V + A++ P SL+ S L D Sbjct: 300 SGLPAQLLERRPDIIAAERRFAATVHRTNEARTARLPRFSLSASSGLGTAQLDGVGVVEA 359 Query: 322 THWSFGPKLYLPIFDKGKIKS--NIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 WS + PIF G++K+ +IR AE A T+ L A ++VE+AL++ Sbjct: 360 LSWSLAAGVVQPIFFGGELKAQQDIRTAEQKAAA--ATYVSVSLRAFEDVEDALSNDYYL 417 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 K L V ++ L Y QG + IL + V+L+ + + Sbjct: 418 HKREGTLGEMVSASSDAVKLGRQQYDQGHADMFTILRLGGENLAARVELTKVRASRLRER 477 Query: 440 VDLYIAIGSGYN 451 V+LY+A+G + Sbjct: 478 VNLYLALGGDFQ 489 >gi|315500635|ref|YP_004089437.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] gi|315418647|gb|ADU15286.1| RND efflux system, outer membrane lipoprotein, NodT family [Asticcacaulis excentricus CB 48] Length = 447 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 89/392 (22%), Positives = 170/392 (43%), Gaps = 32/392 (8%) Query: 4 LRAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 +R SL V LL+ C+ P P PL P+ + + + +N WW +D L Sbjct: 1 MRKYLSLLPVAALLSACST-PTAHFPSAPL-PSTWPVTQAPAYVNK---VWWTQGSDNVL 55 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTN----- 115 L+ A QQ+ I AT R+ A+ + R+ LFP + A + R L Sbjct: 56 LNLLATADQQSHDIRIATARLQEARAAHTTARSLLFPDIAAAGVVQRGDVGLTYGNRTIN 115 Query: 116 -STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + G+LD+ + +DLFG + +++ A +A + ++ K V ++I +YI R ++ Sbjct: 116 IAQGELDASYDLDLFGGLKARSKAAKAGAAAAESSLEDVKGAVRLEIIAAYIGLRQCQQN 175 Query: 174 ISI-------AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ AH I D ++ ++ +G ++ ++E ++ + + + Sbjct: 176 LASLQITSASAHDIADSLRE-------QWQKGLITEGQWRTADSEARAADMGVSRYTDAC 228 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 ++ +S L G + P L I P ++R+RPD+R E L Sbjct: 229 EQYINVLSVLTGDDEMALRETLTTPGK--MPTLRHTEAINTPMPILRDRPDMRIAESNLT 286 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 + A A++ L+P+LS+ G+ D S W+ +Y P+ + G+IK I Sbjct: 287 AARASTRSAQAALFPNLSI-GAFFGRQDTSVGPSVDVWNTAATVYWPLLNFGRIKGQINA 345 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINE 378 A + + Y ++ T + A+ +V ++ + Sbjct: 346 ASAREVQAYEGYRLTAIAALADVRTKWVALEQ 377 >gi|190150166|ref|YP_001968691.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263505|ref|ZP_07545120.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915297|gb|ACE61549.1| predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871148|gb|EFN02877.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 464 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 116/476 (24%), Positives = 217/476 (45%), Gaps = 53/476 (11%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWQNWQDPQLTTLIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRKADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF---- 170 G ++ W++D FG+++ S A+ ++ A ++ LI I +F Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFRIIA 182 Query: 171 --KERISIAHQI--LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 K+ S+ Q+ L K+ I+ +F G + L +++ +I +I+++ TL Sbjct: 183 TDKQNNSLTQQLTALQTLKRYIQG---RFNAGQATAYELNEIDGQISAIQAEQATLSAQA 239 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 240 DEFQRNIAILIGKAPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQ 296 Query: 287 DSVAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDK 337 A + ++DLYP + G + L D +S G S G + LPIF Sbjct: 297 AQAANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTN 351 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHK 394 G+I +NI AE+S + I + +T+L A+ EV++A ++N +++ K + + +K Sbjct: 352 GRIAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQHALNNQNRLLQK--YYQQANK 409 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 410 QAIDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|71277875|ref|YP_271293.1| RND efflux system outer membrane lipoprotein [Colwellia psychrerythraea 34H] gi|71143615|gb|AAZ24088.1| RND efflux system, outer membrane lipoprotein, NodT family [Colwellia psychrerythraea 34H] Length = 464 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 173 RISIAHQILDLYK-------KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R+ A ++L LY+ +N+ + + G T+ L + ++ + + + E Sbjct: 172 RVIEAEKLLALYRSRVANSQQNLAIIEAGYNSGLTAALDVYLTRNDLNNELTRVSEQETE 231 Query: 226 FRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + L+G YP E L N P L I +G+P++LI +P+++ + Sbjct: 232 RTKLIRQLERLIGEYPKGELL------VNANLPLLTTDIPVGLPSELISRKPELKASWYQ 285 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIA-LTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L A + A +PS+ L+GSI T D + G + WS + PIF+ G++K Sbjct: 286 LLSQDAGLAYAHKQRFPSIVLSGSIGDSTADIGDLLSGSSLAWSLLGSVSAPIFNAGRLK 345 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N +A ++ + +T+ NA +VENA+T+ K + A E K + +LS Sbjct: 346 ANEEKARIELKQGEQLYLDTLYNAFSDVENAITTEKNLKNSYYTMLAAQENAKIASTLSF 405 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y+ G + +LD + + + + L K QL + ++L++++G + Sbjct: 406 EQYQSGLVTYTTVLDAQNRSFEAQSTLIKIKNQLIANRINLHLSLGGDF 454 >gi|312131240|ref|YP_003998580.1| rnd efflux system, outer membrane lipoprotein, nodt family [Leadbetterella byssophila DSM 17132] gi|311907786|gb|ADQ18227.1| RND efflux system, outer membrane lipoprotein, NodT family [Leadbetterella byssophila DSM 17132] Length = 472 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 108/482 (22%), Positives = 200/482 (41%), Gaps = 59/482 (12%) Query: 10 LFIVLLAG-CTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + I L+AG C + LP F S + +I L W F+D SL L+ A Sbjct: 8 IVIGLVAGACKLPQTQVSVQEKALPETFK--GSADTSHIGNLSWRNYFSDPSLQALIDTA 65 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK----------TNSTG 118 L NL A ERI A+ +L+ + + P+ +S F P L+ N+T Sbjct: 66 LVNNLDKKMALERIQMAQAQVLAAKGAMLPT----LSGNFSPALRRYGYYTMDGVGNATT 121 Query: 119 Q-----------------LDSDWKIDLFGQRRHIESSLANLD-SAYAQ--VDIAKLNVIS 158 L S W+ID + L+N SAY Q + +N + Sbjct: 122 DILPGKRVPVDLPDFYIGLQSTWEIDAW-------KKLSNRKKSAYQQFLASVEGVNYVQ 174 Query: 159 KLIPSYIDARHFKERISIAHQILDLYK--KNIE--LSHLKFTQGATSKLSLVKLEAEIKS 214 + + + + +F E +++ H++ L + +N E L ++ + A LV + K+ Sbjct: 175 TQLVAEVASAYF-ELVALDHELTVLSETVRNQEEVLDVIRAQKEAARANELVV--QQFKA 231 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + + TLE+ + + + L + + + + L I+ GIP ++ N Sbjct: 232 QQLNTQTLERQVKQEISEVENRLNILLGRYPQPIVRSKDLLFRGLPKDISAGIPVQVLHN 291 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGP 328 RPDI+ ++ + A+++ PS+ L+ I N P Y + +S Sbjct: 292 RPDIKAAALEVESKRLDVLSARAEFLPSIQLSAGIGYQAFN--PKYLLETPTSLAYSLVG 349 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L P+ ++ I++ A+SS + + + +LN EV N L I K+I Sbjct: 350 GLTAPLLNRKAIEARFSTAKSSQVLALLDYHQALLNGYTEVLNELNRIEAYKEISDLKNE 409 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + S+ S Y + + L++L ++ + ++D A ++ S + LY A+G Sbjct: 410 EAQVLQLSVQTSNELYMAAKATYLEVLVAQQNALQAQLDRVEAYKRQWLSSISLYKALGG 469 Query: 449 GY 450 G+ Sbjct: 470 GW 471 >gi|238761679|ref|ZP_04622654.1| outer-membrane efflux lipoprotein [Yersinia kristensenii ATCC 33638] gi|238700193|gb|EEP92935.1| outer-membrane efflux lipoprotein [Yersinia kristensenii ATCC 33638] Length = 469 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/464 (18%), Positives = 201/464 (43%), Gaps = 25/464 (5%) Query: 3 ILRAIFSLFIVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 + +++ + + LAGC + +Y +P M +P ++ I +S ++ WWE+F+D Sbjct: 6 LFKSLVLMISLALAGCGALLKSDYQRP-MVSIPDEWRIKDSGGSYLHHSVHWWENFDDPQ 64 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---- 116 L++ + L N + A ++ A+ ++ P+ + + +L N+ Sbjct: 65 LSESISRMLVSNNDLATAGLKLQQARLTAGLTNTNMTPNVTLTGAGSNTRSLNENTEPRE 124 Query: 117 --TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + +++DL+G+ R E S +++ + L +I Y F ++ Sbjct: 125 SYSTSFGLSYELDLWGKLARAREQSAWLVNATEQDRQVTALLLIGTTADLYWQIAKFNQQ 184 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + L + + +++ + G S++ L++ + + ++ LE+ R N Sbjct: 185 LDYQQTALAISQDTLKIVRSRLAAGDASEIELLQAQQALLDRQNQYQNLEQQ-REVARNA 243 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LL A +Y Q + + +PI +P ++I RPD++ E +L ++A Sbjct: 244 MALLFNRAP---NYRQAERKSLDLQQQVPIAASLPLEVIAQRPDVQAAEWRLRAALAGSD 300 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRA 347 +AK + YP+LSL ++ ++ + W P LP ++ I ++ Sbjct: 301 VAKLNFYPTLSLGATL-----DAGSSVFSQWFSNPSRTLSVNSALPFLQWNTVQLTIDQS 355 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + + ++ V +A+K+V++A+ ++ ++L ++ +SL+ Y+ G Sbjct: 356 KVDVKLAAVDFRTKVYSALKDVDDAMIGRLSYQQQKQNQWQNLQLSQRRLSLTNSQYQAG 415 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S +LD + A E L + + + L++A+G G + Sbjct: 416 AVSFQTLLDAQDALLTSETSLLELQYNYLNATMKLWLALGGGVD 459 >gi|329850119|ref|ZP_08264965.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Asticcacaulis biprosthecum C19] gi|328842030|gb|EGF91600.1| efflux transporter, outer membrane factor OMF lipoprotein, NodT family protein [Asticcacaulis biprosthecum C19] Length = 452 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 87/429 (20%), Positives = 167/429 (38%), Gaps = 42/429 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY---------A 102 WW FND LN L+ A + +L A+ R+ A+ V+A + P + Sbjct: 33 WWRGFNDPQLNALMDEAFANSPDMLAASARLKKARAFSGQVKAAMEPDARFNASIQETKQ 92 Query: 103 SISHRFIPNLKT--------NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAK 153 S++ F P+ K ++ +++++ +DL+G+ + A A + + + Sbjct: 93 SLNMGFPPSFKDFLLDGYHPSTRITVEANYDLDLWGKSKAAVRGAAGQQKATELEAVVVR 152 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 N+ + +Y++ H E + +EL + + + ++++ E Sbjct: 153 QNLSVAIARAYVELNHLYETRDYLADLKHGADVKLELYQARADRHLEPQDTVLRARDEQA 212 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----A 269 + I ++ + H I+TL G L + PNL G+P A Sbjct: 213 QVAGRIAAVDGAIAAQGHLIATLTGAGPDRALRLTR-------PNLAPADTYGLPDDVHA 265 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--------THDNSFPGYN 321 +L+ RPD+ ++ I ++D YP++ L+ L T+D S G Sbjct: 266 NLLGRRPDVLAARLRVEAQGQNIKYTQADYYPNVKLSAYFGLQAIGIPNLTNDGSDIG-- 323 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 GP LP+F + ++ + R AE+ + T+ A+++V NA Sbjct: 324 ---GIGPAFSLPLFHQKRLDAAYRSAEADYDLAVADYDTTLTRALQDVANAANGTRTTVG 380 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 V Q + + LS +++G + ++IL + LS K Q + Sbjct: 381 QVKSAQARRDSAEDGYQLSSARFQRGLATKMEILTAHANVVTADSALSDLKAQAYNDRIS 440 Query: 442 LYIAIGSGY 450 A+G GY Sbjct: 441 FIAALGGGY 449 >gi|34498158|ref|NP_902373.1| outer membrane protein [Chromobacterium violaceum ATCC 12472] gi|34104013|gb|AAQ60373.1| probable outer membrane protein [Chromobacterium violaceum ATCC 12472] Length = 455 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 92/423 (21%), Positives = 181/423 (42%), Gaps = 32/423 (7%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 GC P Y + + P Q++ + ++ WW F D +L ++++ A ++N + Sbjct: 16 GCQATP-YQRQALQT-PAQWTKQGEAD-QDMGREAWWGGFGDPALLEVLQRARKRNPDLE 72 Query: 77 QATERINAAKENILSVRADLFPSSYASISHRFIPNL------KTNSTGQLDSDWKIDLFG 130 A ++ A+ D P+ S+S I +L +++S G L +++DL+G Sbjct: 73 IALLKLRKAQLEAGLADGDARPTLSGSLSGNRIRSLDGGGWSRSHSEG-LKVAYEVDLWG 131 Query: 131 Q----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 + RR + A + S Y Q+ A L S Y D K ++ + L + Sbjct: 132 RVDAARRA--AGEAFVASRYDQIS-AGLLSDSTAAGLYWDIAAGKAKLILGQAALVDAGR 188 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 L+ K+ GA ++ + + + +++ +L + R + ++ LL P L Sbjct: 189 AQALARSKWKAGALAEQDVTQADNAALEQRANLLSLREQLRKKENALALLLDGPPGAALP 248 Query: 247 YMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 + QP + P + G P +L+R RPD++ E +L +A + +++ +P Sbjct: 249 -------DIQPLVARPGMPNVAAGQPGELLRRRPDLQAAEARLRGKLADVDQQRANFFPR 301 Query: 303 LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 +L G ++ + S FG L LP + ++ ++ +E Q + +++T+ Sbjct: 302 FNLGGDLSRSAAVS----GEQLGFGATLTLPFLNWRQLNLKLKSSEVEYQLAEVEFRKTL 357 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 A +EVE+ L + AV L ++ +L+ YR G + LD ER Sbjct: 358 YIAYREVEDGLYEWRRLGESAALQDEAVVLAGRNATLAESRYRGGEADMQSWLDAERGKR 417 Query: 423 KVE 425 + E Sbjct: 418 EAE 420 >gi|146283432|ref|YP_001173585.1| outer membrane protein OprJ precursor [Pseudomonas stutzeri A1501] gi|145571637|gb|ABP80743.1| outer membrane protein OprJ precursor [Pseudomonas stutzeri A1501] Length = 377 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/335 (22%), Positives = 154/335 (45%), Gaps = 18/335 (5%) Query: 124 WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DL+G+ + E++ ++ A+ +L + + + Y+ ++ + H+ + Sbjct: 43 YEVDLWGRLASLREAAELQFQASEAEQQTLRLALAATVAQGYVALLSLDRQLLLTHETVR 102 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + ++ + G TS+L + +E ++ +P LE++ H + L P Sbjct: 103 SRRAALAVAEDRSRMGYTSELEQTQARSEYEAAAQLVPQLEQAILEQEHALRRLTDDPPG 162 Query: 243 EFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 L P G +P++L+R RPD+ E +LA S + + P Sbjct: 163 PV-------PRGTLAALQAPAVPGSLPSELLRQRPDLYQAELQLAASDRFLDSERDRFLP 215 Query: 302 SLSLNGSIALTHDNSFPGYN--THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 + L+ S+ + ++ Y+ WS G + P+FD ++++ + A + + ++ Sbjct: 216 RVQLSASLGRLYVDAL-DYDPVKVWSLGASVLAPLFDGERLEAGVAVATAERNQAAYAYR 274 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 LNA EVENAL+ ++ + +L+ E+ +S++++ Y G S L+ LD +R Sbjct: 275 RAALNAFSEVENALSGLDSLARQSRRLEARREVLARSLAIAEDRYHGGYSSYLEALDAQR 334 Query: 420 ---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 T EV L A QL + ++LY A+G G+ Sbjct: 335 NLFDTQLAEVRLQEA--QLNR-LIELYRALGGGWR 366 >gi|288933648|ref|YP_003437707.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] gi|288888377|gb|ADC56695.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] Length = 482 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 91/464 (19%), Positives = 197/464 (42%), Gaps = 36/464 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 +GC + + + P Q + +L N D +WWE+++D LN L+ ALQ + Sbjct: 23 SGCALIQDEPSQVAIVNPQQAQLAQVIHLANSDWPAARWWEAYDDPQLNLLINRALQNSP 82 Query: 74 TILQATERINAAKENILSVRADL---------------------FPSSYASISHRFIPNL 112 T+ A RI+ ++ + R+ + +P SY+ + P Sbjct: 83 TMQAARLRISQSQSTVELARSAMGLQATAVAAQNRLRITDKSFSWPYSYSLPVDKNGPWY 142 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+ G + + IDL+G R + +++ ++ A+ +L++ S + Y + Sbjct: 143 TLNTVG-VGAQLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQLYFAMQATF 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I++ ++ + + ++ + +G + + AE + I + E Sbjct: 202 QKIALLQELEGIAQFSVAAHEHRTQRGVEDSVDVANARAEQLAARQQIISAEGMLTQYRE 261 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A +H + P L + + +L+ RPD++ + S+ Sbjct: 262 TLRALIGADAQSMPAIHPVAL------PALQETLPSSLSFELLARRPDLQALRGYVTASL 315 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +++ AK+ YP + G AL+ + F + P LYLPIFD G++ +N++ Sbjct: 316 SQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLYLPIFDGGRLNANLQS 375 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + + VL+A+++V + + +N+ + Q V + + + +Y++ Sbjct: 376 VRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVTAAQTTTDSARAHYQR 435 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S + RA ++ L + Q + + L A+G GY Sbjct: 436 GLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGY 479 >gi|238025329|ref|YP_002909561.1| RND efflux system outer membrane lipoprotein NodT [Burkholderia glumae BGR1] gi|237879994|gb|ACR32326.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia glumae BGR1] Length = 482 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 87/452 (19%), Positives = 188/452 (41%), Gaps = 49/452 (10%) Query: 34 TQFSIG----NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAA-KEN 88 QF G +++ ++D WW +F D L++++ AL ++ R++ A + Sbjct: 43 AQFDPGLALRSARGRADVDA-HWWRAFGDPQLDRVLADALADAPSLKAQRARVDEALAQA 101 Query: 89 ILSVRADL--FPSSYASISHRF-----IP-----NLKTNSTGQLDSDWKIDLFGQRRHI- 135 +S A L +S +++ R +P + + N+ L++ + +D+ G+ R + Sbjct: 102 DVSAAASLPRLGASASALPQRLPRSYNVPPPAAGHWQVNAQALLNASFDLDVAGRLRALT 161 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 ++ D A A +++ + L+ +Y+ + + IA L + L+ + Sbjct: 162 RAATLRADQQQALERAATVSLQAALVETYLQLALELQLLEIAQDTLRQQDYLLRLTRQRA 221 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY---------PATEFLH 246 G ++ + + +++ + + H ++ L+G PA L Sbjct: 222 AAGLDMPAAVARAGEPLPLAAAEVERQHAAVALLRHRLAALVGRGPGYADTLTPAPGVLR 281 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + P+ +PA L+ RPDI ++ A I A++ YP ++L Sbjct: 282 AL------------APLPATLPAALVGRRPDILAARYRVEAESAGIDAARASFYPDINL- 328 Query: 307 GSIALTHDNSFP------GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +A SF G + + GP + LPIF+ G++++ +R + + + Sbjct: 329 --LAFAGVQSFGFRALLHGSSGAFGAGPAITLPIFEGGRLRAGLRAQTDAYNAAVADYDD 386 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 TV++A+ +V ++L ++ + A+ + + + Y++G LD+L E Sbjct: 387 TVVHALAQVSDSLVQLDSLARQRDLTVEALARAQSTYEIETRRYQKGISGYLDVLLAETR 446 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + ++ A LA +V L A+G NP Sbjct: 447 LLEDRRSVARADTSLAVEHVRLIAALGGATNP 478 >gi|241668201|ref|ZP_04755779.1| outer membrane efflux protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876736|ref|ZP_05249446.1| outer membrane efflux protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842757|gb|EET21171.1| outer membrane efflux protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 490 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 111/492 (22%), Positives = 212/492 (43%), Gaps = 66/492 (13%) Query: 3 ILRAIFSLFIVLLAGCTV-GPEYTKPHM--PLL--PTQFSIGNSKNLINIDTLKWWESFN 57 I+ ++ L++ C+ P+Y KP + P L + G +KN N+ + WW F+ Sbjct: 6 IISSVLITTTFLISSCSFFDPKYEKPEVKTPALWNSQDKNTGITKNW-NLTKIAWWREFH 64 Query: 58 DTSLNKLVKIALQQN-------LTILQATERINAAKENIL---SVRADLFPSSYASI-SH 106 D LN L+ AL+ N ILQA IN A L SV F + I S+ Sbjct: 65 DPVLNNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDINSN 124 Query: 107 RFIPNLKT----NSTGQLDS---DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 IP L ++G L + I++ Q + E S + + +L++IS+ Sbjct: 125 SSIPQLNNVGTQTASGSLVGIIPSYTINIARQFKLGEISRLSKKMQVNLKNTTRLSIISQ 184 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL-------SLVKLEAEI 212 + +Y +E++ + Q+++ + + + GATS + L + ++ Sbjct: 185 VSAAYFSLITAQEQLKLQTQMVNQLQLLFYYAENQHKLGATSPMLEEVIRQQLEAQKGKV 244 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 I++DI + + ++ L+G + + + N ++ +P+N+ P+ ++ Sbjct: 245 AMIKNDIVHFQNTLKI-------LMGRNPGKIV--TTRTLNEINADIKVPVNM--PSQVL 293 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 NRPD+ E KL + A IG+A+S +PS+ L G+ N + G + Sbjct: 294 ENRPDVAIAEYKLQTANANIGLARSQFFPSIDLTGAFG----------NATLALGELATM 343 Query: 333 -------------PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 PIF+ I ++ +A++ + Y + T+ ++V++ L+ + + Sbjct: 344 NAWAWAAQAVAAVPIFNMS-ILADSDKAKAQFYQAYYDYINTLQQVFQDVDDTLSERSAN 402 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 +K K +++ +K S+ Y G S I ++ + AK + S Sbjct: 403 EKNYIKQTISLKSTEKQESIFSKKYSSGAISKAQYTGITLNVLYQQMQANQAKLKSLISI 462 Query: 440 VDLYIAIGSGYN 451 V+LY A+G+GYN Sbjct: 463 VNLYQALGAGYN 474 >gi|224418748|ref|ZP_03656754.1| hypothetical protein HcanM9_05668 [Helicobacter canadensis MIT 98-5491] gi|253826725|ref|ZP_04869610.1| outer membrane protein TolC [Helicobacter canadensis MIT 98-5491] gi|313142264|ref|ZP_07804457.1| RND efflux system [Helicobacter canadensis MIT 98-5491] gi|253510131|gb|EES88790.1| outer membrane protein TolC [Helicobacter canadensis MIT 98-5491] gi|313131295|gb|EFR48912.1| RND efflux system [Helicobacter canadensis MIT 98-5491] Length = 476 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 105/425 (24%), Positives = 182/425 (42%), Gaps = 55/425 (12%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----SHR---- 107 F D L +L++IA++QN+ + A RI A+ + S ++FP A++ SH Sbjct: 64 FADEVLWELMEIAIKQNMDLQIAQTRILQARSQLKSAWGEMFPKVSANLGVNDSHTRGSS 123 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANL------DSAYAQV----DIA 152 I N NS Q W++DLFG+ +++ +L D + AQ+ D+A Sbjct: 124 TQNSAVIENSSQNSQIQATLSWEVDLFGRLNAAKNAKESLYYKSLEDLSNAQIVLLGDVA 183 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L Y R I + + + Y+ +EL+ LK G L + + Sbjct: 184 NL---------YFTLREMSLNILLTQENILYYQDILELTRLKVENGLLDTTELFDAQDML 234 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEF---LHYMQKQSNNFQPNLYIPINIGIPA 269 + ++ + L+ + + LL +F Y+ + F N IPA Sbjct: 235 TNEQNILEQLKTQQEETKNALLVLLDVKNLDFNLLGDYVFVSPSAFVLN-------TIPA 287 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTHWSFG 327 D++ RPDI+ + L V AK+ L+P LSL+ ++ L G N WS Sbjct: 288 DVLLFRPDIKAAIQSLYAQVYNKENAKASLFPILSLSADLSEVLGSSKGNAG-NLAWSLA 346 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L PI ++ ++ N ++ QE Y+T Q+T+ A+ EVENA+ + ++LQ Sbjct: 347 AGLAAPILNRTQLTQNYFLQDAMLQESYLTLQKTLNTALAEVENAIFNTQS-----SQLQ 401 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV-----DLSIAKRQLAKSYVDL 442 + + S + R S+ I ++E T K + +L+ +K K+ + L Sbjct: 402 VQNNTQRLQNAKSYYEFSANRRSIGLIDELEYLTNKASLNNSQKNLNTSKNTHLKALITL 461 Query: 443 YIAIG 447 + A G Sbjct: 462 FKAFG 466 >gi|309704548|emb|CBJ03897.1| multidrug resistance outer membrane protein [Escherichia coli ETEC H10407] Length = 488 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/473 (18%), Positives = 205/473 (43%), Gaps = 45/473 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI-------------PNLK-- 113 + T+ +A R A+ ++L + L ++ ++ + + P L Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMD 138 Query: 114 ----TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + Sbjct: 139 GPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYYSMQ 198 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 199 ASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITE 258 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKK 284 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 259 TRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWY 310 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIAL--THDNS-FPGYNTHWSFGPKLYLPIFDKGKIK 341 + S+ ++ A++ YPS + L H ++ F + ++F P L LP+FD G++ Sbjct: 311 VQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLN 370 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMS 398 +N+ +++ + ++VLNA+++V L ++N+++++ + A +++ Sbjct: 371 ANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAE 430 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y++G S L + E+ L + + + L ++G Y Sbjct: 431 AA---YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGEYQ 480 >gi|289670702|ref|ZP_06491777.1| outer membrane efflux protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 308 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 32/296 (10%) Query: 16 AGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKWWESFNDTSLNKLVKIA 68 A TVGP Y P P F GN + +WW + D L+ L++ A Sbjct: 20 ACSTVGPNYAVPAESAYQRPAANAAFLDTGNDQVQPGAALPARWWALYQDPMLDGLIEQA 79 Query: 69 LQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASISHRFIP--N 111 L+ N+ + A R A E + RA + S+ A + +P N Sbjct: 80 LRDNVELKVAGANLRRAAAVYEQAMDAGGFDYEVEAGVSRAQV--SAEAFLQEEKLPVFN 137 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L + G+ ++ DLFG+ +R E++ A+ A A +D+A+++V +++ SY++ + Sbjct: 138 L---ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARVSVAAQVAGSYVEICNA 194 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +A L L + + E++ G + L + A++ +E+ +P L + Sbjct: 195 NHELQVAEHSLQLQQHSREITQRLIAAGRGTPPDLARATAQVAMLEASLPPLRARRQAAG 254 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + ++ LLG E + S P + PI IG L+ RPD+R E++LA Sbjct: 255 YQLAALLGKTPGEVPTGV--DSCAHAPAVQQPIPIGDGRALLARRPDVRQAERRLA 308 >gi|56551860|ref|YP_162699.1| NodT family RND efflux system outer membrane lipoprotein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543434|gb|AAV89588.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ZM4] Length = 477 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 109/478 (22%), Positives = 206/478 (43%), Gaps = 47/478 (9%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNK 63 S+ +LL GC P+ K P + +++L + WW+S+ D L++ Sbjct: 11 ISVAALLLTGCASIPKLGKA--PKVKDVHDYATAQSLAGNGSAWPGEGWWKSYGDPQLDQ 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKTNSTGQ 119 L+ AL + + A RI +A + A L PS + H TG+ Sbjct: 69 LMTEALAKAPDMAIAKARILSAAGSKQRAGAGLLPSVNGFVGTGAGHLMRDQEIRQVTGR 128 Query: 120 LDS--DWK------------IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 D DW ID++G R + ++ + +A A L + + + +Y Sbjct: 129 NDEFKDWGDGGSSFLTIRYNIDIWGGYRAKLAAATSEAKAAIVDSHEAALTLTTSIAAAY 188 Query: 165 ID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + +R F+ER + ++ L + +EL+ + G + ++ A + + ++D+ + Sbjct: 189 ANLSRLFEER-QVLNRTLAVRSHVLELTQQRLGHGLDNDSTMQDASARLANAQADLTANQ 247 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 +S + H I+ L+G + + QS + + +P N + DL+ RPDI Sbjct: 248 ESIDLVRHQIAALMGAGPDRGMAITRPQSVKLRA-VGLPDNAAL--DLLGRRPDIVAARL 304 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGK 339 + ++ +AK+ YP++SLNG + + TH + L LPIF G Sbjct: 305 TAEAAGYRVKVAKTQFYPNVSLNGIVGY-QTRALEHMATHGLALGAASAALNLPIFRGGS 363 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE-LHKKSMS 398 + R A ++ QE ++ +T+ A+++V +A TS K++ +L V+ L+ +S Sbjct: 364 LSGQYREAWATYQEAVASYDKTLSQALQQVADAATS---QKQLNLQLDQTVQALNHAELS 420 Query: 399 LSMI--NYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ Y+ G + +++L E K DL QL V L A+G G+ Sbjct: 421 YNVLANRYKSGLVTYIEVLQGEENVLTLRKAVADLRARAFQLD---VSLIQALGGGFT 475 >gi|301632653|ref|XP_002945396.1| PREDICTED: outer membrane protein oprM-like [Xenopus (Silurana) tropicalis] Length = 224 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 13/193 (6%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNT 322 G+P+DL+ RPDIR E++L + A IG A++ +PS++L G+ + N F + Sbjct: 26 GLPSDLLTQRPDIRQAEQQLIAAHASIGAARAAFFPSIALTAQAGTASTALSNLF--KSG 83 Query: 323 HWSFGPKL--YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 W+F P + LP+F+ G+ ++ + A++ +++ + +A +EV +AL S + Sbjct: 84 TWAFTPTVSALLPVFNTGRNQAVLEAAQAGRDMALAQYEKAIQSAFREVSDALASQSLLA 143 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK 437 + Q + + LS + Y+ G S LD+LD +R+ +E V + +A+ Q Sbjct: 144 EQSRAQQAQAAAEAQRLRLSDLRYQNGVASYLDLLDAQRSLFALEQAVVQVRLAQLQ--- 200 Query: 438 SYVDLYIAIGSGY 450 + V LY A+G + Sbjct: 201 NQVQLYKALGGSW 213 >gi|193215384|ref|YP_001996583.1| RND efflux system, outer membrane lipoprotein, NodT family [Chloroherpeton thalassium ATCC 35110] gi|193088861|gb|ACF14136.1| RND efflux system, outer membrane lipoprotein, NodT family [Chloroherpeton thalassium ATCC 35110] Length = 479 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 96/393 (24%), Positives = 177/393 (45%), Gaps = 38/393 (9%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI-------GNSKNLINIDTLKWWESFNDT 59 + ++ V LA C E KP P + T+ + G+S + +I W E F D Sbjct: 21 LIAILSVGLASCQSYKELEKP--PQIDTEGIVRGGAQAKGDSTTIADI---PWKEYFPDK 75 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY---ASISHRFIPN----- 111 L L+ L++NL + A RI +K + LS+ D S A I H + Sbjct: 76 YLQALIAEGLEKNLDLQIALARIKQSKAS-LSISRDAGDPSLSIGAEIDHARTSSGDDGK 134 Query: 112 ------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 NS G + S W+IDL+G+ + AN ++ ++ + +I+ + +Y Sbjct: 135 KVLGYTTNQNSLGFVAS-WEIDLWGKLNSSARAEYANYLNSREYKNLVQTELIANIATAY 193 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +++ + + + L KK+ E G + S+ + A + S + IP L+ Sbjct: 194 YNLLALDKKLQVTEETVVLLKKSTETMEALKEAGQQNAASVEQSRALLYSTQLSIPPLKS 253 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 R + I LL L +++ S + Q + ++ G+PA L+ RPD++ E Sbjct: 254 QIRTQENAICILLNRD----LGTIERASIDNQ-KVATKLDYGVPAQLLSKRPDVKQAELS 308 Query: 285 LADSVAKIGIAKSDLYPSLSLN----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + A A++ YPSL+++ G + + N F N + L PIF+K ++ Sbjct: 309 LLAAYAATDAAEASFYPSLNISSASFGFASGSFSNFFKIENLAANIVASLTQPIFNKSQL 368 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 N++ A++ +E + ++ TV++A +EV + L Sbjct: 369 TGNLKIAKAQQEEALLAFRSTVISAGQEVSDIL 401 >gi|238791305|ref|ZP_04634944.1| outer-membrane efflux lipoprotein [Yersinia intermedia ATCC 29909] gi|238729438|gb|EEQ20953.1| outer-membrane efflux lipoprotein [Yersinia intermedia ATCC 29909] Length = 455 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 88/455 (19%), Positives = 200/455 (43%), Gaps = 25/455 (5%) Query: 12 IVLLAGCT--VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 ++LL GC + +Y +P + + P ++ + ++ ++ WWE+F+D L+ + L Sbjct: 1 MLLLTGCGSLLKSDYQRPMLSV-PEEWRVKDTGGGYLHHSVHWWENFDDPQLSDSISRML 59 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSD 123 N + A ++ A+ +L P + + +L N+ + L Sbjct: 60 VSNNDLAAAGLKLQQARLTAGLTNTNLTPDITLTGAGSNTRSLNENTQPRESYSTSLGLS 119 Query: 124 WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD 182 +++DL+G+ R E S +++ + L++I Y F +++ L Sbjct: 120 YELDLWGKLARAREQSAWLVNATEQERQETALSLIGTTADLYWQIAKFNQQLGYQQAALA 179 Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + + + + + G S++ L++ + + ++ LE+ R N LL A Sbjct: 180 IAQDTLNIVRSRLAAGDASEIELLQAQQALLDRQNQYQNLEQ-LREAARNAMALLFNRAP 238 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 ++ H ++++S + Q + I +P +I RPD++ E +L ++A +AK + YP+ Sbjct: 239 DYRH-VERKSLDLQQQ--VAIAESLPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPT 295 Query: 303 LSLNGSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYI 356 LSL S+ ++ + W P LP ++ I +++ + + Sbjct: 296 LSLGASL-----DAGSAVFSQWFSNPSRTLSVNSALPFLQWNTVQLTIDQSKLEVKLAAV 350 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++ V +A+K+V++A+T+ ++ ++L ++ + L+ Y+ G S +LD Sbjct: 351 EFRSKVYSALKDVDDAMTARLSYQQQKQNQWQNLQLSQRRLILTNSQYQAGAVSFQTLLD 410 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + A E L + + + L++A+G G + Sbjct: 411 AQDALLTSETSLLELQYNYLNATMKLWLALGGGVD 445 >gi|253581880|ref|ZP_04859104.1| predicted protein [Fusobacterium varium ATCC 27725] gi|251836229|gb|EES64766.1| predicted protein [Fusobacterium varium ATCC 27725] Length = 473 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 56/405 (13%) Query: 8 FSLFIVL--LAGCTVGPEYTKPHMPLLPTQFSIGNSKN--LINIDTLKWWESFNDTSLNK 63 F L ++L L GC+ P+ TK + + S G +N LI +T WW +ND LN+ Sbjct: 5 FVLILILSTLLGCSPIPKITKDEI-ITSNNISTGVFENQKLIFSNT-SWWRIYNDPVLNQ 62 Query: 64 LVKIALQQN-------LTILQATERINAAKEN---ILSVRADLFPSSYASISHRFIPN-- 111 L+ L++N L IL+A E +N AK + +++ DL P Sbjct: 63 LINFVLKENEDLKIAKLNILKADEAVNLAKSDSGVTINLAGDLKREKLGKNGTTPPPFGG 122 Query: 112 --LKTNSTGQLDSDWKIDLFGQ------RRHIESSLANLDSAYAQVD----IAKLNVISK 159 + S G L +D+ IDLF + + ++ L+S + ++D +A+L + K Sbjct: 123 KIINIGSIG-LQADYNIDLFNKVNSLITEQKYKAEAVKLNSKWIELDLSNRVARLYLYWK 181 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + E+ +I +I L +KN+++ G ++ ++ + EI++++ + Sbjct: 182 YL--YQENIILTEQKNILIEIEKLQEKNLKI-------GNGTEDNVWAAQNEIRTVDMLL 232 Query: 220 PTLEKSFRMNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR--NRP 276 E + ++ ++N++ L + E +QK S P +NI NRP Sbjct: 233 KENELNKQLTINNLNILSSNKHSDEIYSLLQKNSQELTPEFKEKVNIPSSISSDIIINRP 292 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--------SFPGYNTHWSFGP 328 D+ Y + + AK+D YP S+ G N S G+ GP Sbjct: 293 DVEYYLMLIKGQEKHLEAAKADFYPQFSITGQYGFEGINFNKILRKDSLLGF-----IGP 347 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 +YLPIF G IKS + A + + + ++NA +V+N L Sbjct: 348 SIYLPIFHSGAIKSTYKIAGTDMNIFIEEYNKAIINAYNDVDNEL 392 >gi|325524353|gb|EGD02446.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 278 Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 58/297 (19%) Query: 15 LAGCTVGPEYTKPHM----------------PLLPTQFSIGNSKNLINIDTLKWWESFND 58 LAGCTVGP+Y +P + P P + + + WW +F D Sbjct: 1 LAGCTVGPDYRRPEVDTPAAWRLDPADAYWHPAAPARAPLDPA----------WWTAFGD 50 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRF-----IPN- 111 L+ L AL+ N ++ R + AK + SV + +P+ + S RF P Sbjct: 51 PQLDALEADALRNNQSLKVVAARYDQAKATLASVASAQYPAVGLNASGQRFKISADRPQT 110 Query: 112 ---LKTNSTGQLD------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 +++ ST Q D +++DLFG+ RR++ES+ A+ + A A+L + + L Sbjct: 111 NYAVQSQSTVQNDIQVGASVSYELDLFGRVRRNVESAQASSEQARDDFANARLVLSADLA 170 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 SY R I + + ++L +K ++ + GA S L L++ A++ + + Sbjct: 171 SSYFSLRELDTEIDVVKRSIELQQKALDYVTSRHDLGAVSGLDLLQQRAQLDATRTQAQL 230 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-----GIPADLIR 273 L + I+TL+G PA F P +PI G+P+DL++ Sbjct: 231 LIQQRAQVETAIATLVGTPAPAFSL----------PPRVVPITAPALPPGLPSDLLQ 277 >gi|33597029|ref|NP_884672.1| putative outer membrane protein [Bordetella parapertussis 12822] gi|33566480|emb|CAE37736.1| putative outer membrane protein [Bordetella parapertussis] Length = 473 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 92/435 (21%), Positives = 191/435 (43%), Gaps = 27/435 (6%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 +G S + +WW+ + D L+ LV AL + ++ A R+ A + RA L Sbjct: 36 LGLSAAGVQWPARQWWQRYADPQLDALVSEALASHPSLAAARARLAQANAAVAGARAPLL 95 Query: 98 PSSYA--SISHRFIPN--LKTNSTG---------QLDSDWKIDLFGQRRHIESSLANLDS 144 P A +++ ++P + TG LD +++D +G+ R + + Sbjct: 96 PRVDANYTLTREYLPKNYIYPPPTGGSVVSDNRLALDFSYELDFWGKNRARLQAAVSQRD 155 Query: 145 AYAQVDIAKLNVISK-LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 A A N++++ ++ SY++ ++ + + ++L + ++L+ + G +++ Sbjct: 156 AADADAQAARNLLARAIVRSYLNLQNAFAQREVLQRVLSQRAEVVDLTRGRKAAGLDTEV 215 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI 263 + + E+ + + ++ E + + ++ L G A P IP Sbjct: 216 EVKQAESSLAAGRVELTQNETTIAQLRNQVAALAG--AGPVRGQALAPVALTAPGGVIPA 273 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGY 320 N+ P +L+ +RPD+ + + I AK++ YP+++L G AL Sbjct: 274 NV--PLELLGHRPDVTAARWRAIAARHGIEAAKAEFYPNINLVAFAGFEALGTGRLLDAG 331 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + GP + LPIF G++ +N+ + A + +TVL+A+++ +A+ ++ Sbjct: 332 SRAAGIGPAITLPIFHGGELNANLAGRRADADLAVSDYNQTVLDAVQQTADAIDALRLLG 391 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAK 437 + + + A E + L++ YR G + L +L + A+++ DL I QL Sbjct: 392 REQAEQRQAREAIDAAYDLAVKRYRAGLGNYLSVLIAQTGVLTQARLDTDLRIRAYQLD- 450 Query: 438 SYVDLYIAIGSGYNP 452 DL A+G GY P Sbjct: 451 --ADLAYALGGGYAP 463 >gi|206580172|ref|YP_002236676.1| multidrug resistance outer membrane protein MdtP [Klebsiella pneumoniae 342] gi|206569230|gb|ACI11006.1| multidrug resistance outer membrane protein MdtP [Klebsiella pneumoniae 342] Length = 482 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 91/464 (19%), Positives = 196/464 (42%), Gaps = 36/464 (7%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQQNL 73 +GC + + + P Q + +L N D +WWE+++D LN L+ ALQ + Sbjct: 23 SGCALIQDEPSQVAIVNPQQAQLAQVIHLANSDWPAARWWEAYDDPQLNMLINRALQNSP 82 Query: 74 TILQATERINAAKENILSVRADL---------------------FPSSYASISHRFIPNL 112 T+ A RI+ ++ + R+ + +P SY+ + P Sbjct: 83 TMQAARLRISQSQSTVELARSAMGLQATAVAAQNRLRITDKSFSWPYSYSLPVDKNGPWY 142 Query: 113 KTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N+ G + + IDL+G R + +++ ++ A+ +L++ S + Y + Sbjct: 143 TLNTVG-VGAQLNIDLWGADRARVAAAIGEKNARLAETAGIELDIASSVAQLYFAMQATF 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++I++ ++ + + + + +G + + AE + I + E Sbjct: 202 QKIALLQELEGIAQFSAAAHEHRTQRGVEDSVDVANARAEQLAARQQIISAEGMLTQYRE 261 Query: 232 NISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L+G A +H + P L + + +L+ RPD++ + S+ Sbjct: 262 TLRALIGADAQSMPAIHPVAL------PALQETLPSSLSFELLARRPDLQALRGYVTASL 315 Query: 290 AKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +++ AK+ YP + G AL+ + F + P LYLPIFD G++ +N++ Sbjct: 316 SQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLYLPIFDGGRLNANLQS 375 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +++ + + VL+A+++V + + +N+ + Q V + + + +Y++ Sbjct: 376 VRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVTAAQTTTDSARAHYQR 435 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 G S + RA ++ L + Q + + L A+G GY Sbjct: 436 GLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGY 479 >gi|167588338|ref|ZP_02380726.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 345 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 57/334 (17%) Query: 15 LAGCTVGPEYTKPHMPL------------------LPTQFSIGNSKNLINIDTLKWWESF 56 L+GC + P T P MP + QF +G + +WW + Sbjct: 20 LSGCAMAPSSTPPAMPSPAHYGATPQAPRTAEAAGVAQQFDVGAAP------VPQWWRLY 73 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPS--SYASISHRFIPNLK 113 ++L+ LV L+ N T+ A + + AA+E + + + A PS + A + P++ Sbjct: 74 RSSALDALVDEGLRANPTLAAAEKTLAAAQEELRAQIGASTLPSIDANAQAARTRTPDIS 133 Query: 114 TNST---------GQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPS 163 GQL + + DLFG R+ ++S A +D+ +++ A+ + + ++ + Sbjct: 134 GAGAQSLRYNVFVGQLQAHYTFDLFGATRYANDASAARVDARGCELEAARRALAANIVGT 193 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 I A +I + + +D+ + + ++ GA S + + S+ + +P L Sbjct: 194 AIRAATLDRQILLTERQVDVAEASALEDQQRYALGAVSHVQALASTQGAASLAATLPPLR 253 Query: 224 KSFRMNVHNISTLLGY------PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLIRNR 275 + VH ++ LLG P F L +P + + +P+DL++ R Sbjct: 254 QQRASAVHALAILLGRTPDAPPPVPSFT------------GLSLPEHVPVVVPSDLLKAR 301 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 PDIR + + A +G A + L+PSLSL ++ Sbjct: 302 PDIRAAAAAVKAASADVGEATAQLFPSLSLTATM 335 >gi|254255207|ref|ZP_04948523.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124900944|gb|EAY71694.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 524 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 87/425 (20%), Positives = 197/425 (46%), Gaps = 38/425 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 W + F D L L+ AL+ + T+ QA R+ AA S A P + YA +F Sbjct: 83 WADQFGDDQLKALLDEALKDSPTLEQARARVAAASAYRESANAGTMPRVDARYALAREQF 142 Query: 109 -----IP-----NLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 +P + +T ++G + + +++DL+G++R + ++++ + ++ A + +L + Sbjct: 143 SGTALVPPPYGGSWQTENSGVVSASYELDLWGKKREALRAAVSRVHASRADAEAVRLALT 202 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + +Y IA Q + ++ ++ + G +++ A++ + + Sbjct: 203 TSIARTYNRLARLYVLHDIAQQEIARREQIDRITAGRIATGLDTQVERKTALADLATSRA 262 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + +L+ + ++ LLG L + + + ++ +P ++ PADL+ RPD Sbjct: 263 ALKSLDGQMIATRYQLAALLGAGPDRGLR-IARPALGTGDDVRLPDHL--PADLVSRRPD 319 Query: 278 I---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-------SFG 327 I R+ LA V + AK++ YP ++L+ +I L ++F G+ S G Sbjct: 320 IVAARWSVDALAHDVKQ---AKAEFYPDINLSAAIGL---DAF-GFGRFLTAASRTASIG 372 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P ++LPIFD G +++ ++ + + T++ A+ +V L + + Sbjct: 373 PAIHLPIFDAGGLRAQLKGRYAEFDHAVAAYNATLVTALADVATQLADVRSTDAQLVDAL 432 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIA 445 A + +++ +L+++ YR G + L +L+ + + D ++A ++ + + L A Sbjct: 433 AAQQAAREAATLALVQYRAGLTNQLTVLNAD--VNALAADQAVANLRMNRRDRQIALASA 490 Query: 446 IGSGY 450 +G G+ Sbjct: 491 LGGGF 495 >gi|54296465|ref|YP_122834.1| hypothetical protein lpp0496 [Legionella pneumophila str. Paris] gi|53750250|emb|CAH11644.1| hypothetical protein lpp0496 [Legionella pneumophila str. Paris] Length = 450 Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 99/439 (22%), Positives = 187/439 (42%), Gaps = 48/439 (10%) Query: 33 PTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 P QF S + + + + L WW+ F D L++L+ L+ N+ I A + A+ + Sbjct: 35 PKQFPSSPRDYRPVQELPYLAWWKQFQDPELDRLIDTGLKTNMDIHIAMANLQQAQGELQ 94 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK------IDLFGQRRHIESSLANLDS 144 V+ P+ I + N G W + L+ Q++ + + + Sbjct: 95 QVKLSWIPN--VQILGGYSTNPALGVPGGFYGIWPSYILNIMQLYTQQKRAQYQVQYHQA 152 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A +D +L +I ++ +Y E++ + +++ K I LS + G + + Sbjct: 153 A---IDGLRLTLIGQVAAAYFTLIAQLEQLKLLYELDRDLKSLIALSRKEINIGLKNDID 209 Query: 205 LVKLE-------AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 L +L+ A+IK I+ +I + + R ++ L+ K NNF Sbjct: 210 LAQLQSNERLIAAQIKPIKHNIVVSQNALRYLINENPGLI------------KSKNNFAQ 257 Query: 258 NLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--D 314 + G +PA ++ NRPD++ E L + A I +A SD +P + L+ I H D Sbjct: 258 LDFTRFKPGSLPATVLGNRPDMKMAEYSLKAARAGIFVAYSDFFPVMQLDDFIGEAHLPD 317 Query: 315 NSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 ++F +W+ P GKI S + ++ +Y+ +TV +KEV+N Sbjct: 318 STFEQATDAYVNWTINPNTL------GKI-SVSKGVYNAKLAEYV---KTVRLILKEVDN 367 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A ++ ++ +HA E ++ L + G S ++L+ + + + + A Sbjct: 368 AFSANKRMREQFLSYRHAQEDYQHKYKLQNGLLKSGLMSYKELLESKVYLDTLALSTNQA 427 Query: 432 KRQLAKSYVDLYIAIGSGY 450 K +LA S V LY + GY Sbjct: 428 KLELAMSLVMLYQDLAGGY 446 >gi|332968270|gb|EGK07344.1| outer membrane multidrug resistance lipoprotein [Kingella kingae ATCC 23330] Length = 468 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 96/472 (20%), Positives = 205/472 (43%), Gaps = 35/472 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 ++S+ + LA C E T P+ Q ++ N I + WW+++ D LN+L++ Sbjct: 6 VYSMAM-WLAACASFGEQTPLAQPVSGEQLNLPNQA--IAPISPTWWQAYQDAQLNRLIE 62 Query: 67 IALQQ--NLTILQATERINAAKENIL----SVRADLFPSSYASISHRFIPNLKT------ 114 ALQQ +L ++ A R A + V+A L ++ A + H + P+ KT Sbjct: 63 QALQQSPDLQMVAARIRQAQAAHGLAQSQQGVQAAL-KANGAGLLH-YSPDDKTAPIPAA 120 Query: 115 --NSTG--------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 ++ G QL++ W DL+G Q+ ++L + + + A+L + + Sbjct: 121 VQDAIGHDIAYGSLQLNAQWTWDLWGKQKAQTAAALGQVQARQYEWVAARLAIAQAVAQH 180 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + +++ S Q + + +K L + G + A +++ + ++ Sbjct: 181 YWQWQTLRQQASYIEQRIAIKQKQEALLQQRIRAGLMPASQAYPITAAKCQLQAALRQMQ 240 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + +H ++ L G + Q+++ +P + + ADL+ RPDI Q + Sbjct: 241 QRAEQTLHALAALSGKTPNDLPTL---QASHLASVPTLPSDT-LTADLLGKRPDIAAQRE 296 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + I A++D YP++ ++ L+ N N P + LPIF G + Sbjct: 297 AILARNQLIKAARADFYPNIRISALAGLSELKIGNLPTSANLMAGLLPSVSLPIFTSGAL 356 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++N+ + + EQ + +TV ++++ NAL + + + Q + + +++ + Sbjct: 357 QANLAQKHAEFDEQVAQYNQTVYQSLRQAANALVAYEQSAQAYRLQQESTAIAQRAAQAA 416 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +R G + L+ L + + A+ Q ++++ +A+G G+ P Sbjct: 417 ARRHRAGLDNGLNQLATQDEVLVAQSQQLDAQAQQNAAWINANVALGGGWLP 468 >gi|325105154|ref|YP_004274808.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] gi|324974002|gb|ADY52986.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] Length = 450 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 96/417 (23%), Positives = 178/417 (42%), Gaps = 40/417 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRF------IPN 111 SL + + +AL NL + Q+ + + EN+ R +LFPS +S S +F Sbjct: 38 SLRQAIDLALSNNLQVRQSALQSQISAENLKQSRFELFPSLNGSSSASRQFGLFFDQASG 97 Query: 112 LKTNSTGQLDSDWKIDL-----FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 QLD + + F R I + A L+S + V+ AK +++ +I +Y+ Sbjct: 98 TVVQQADQLDGNLGTSVPIFQGFSLRNRILQNKALLNSDVSNVEKAKNDLLLSVITTYLQ 157 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 A ++ +S +HQ L L + + ++ F G + L + +A++ + E + + +F Sbjct: 158 ALANRDLVSASHQQLSLSNEQLNIAKRNFDVGNKTLADLSQAKAQVANNELSLTNAQNAF 217 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNR-----PD 277 ++V + L+ + + YIP + +G A+ + N+ PD Sbjct: 218 DLSVLELKQLMELNLDQDIELEVP---------YIPSLAKLELGYTANAVYNQAVENYPD 268 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGY---NTHWSFGPKL 330 ++ + S + AK DLYPSLS G I + NSF N + G +L Sbjct: 269 VKVAKYNTEASSYALKAAKGDLYPSLSFRGGIGTRYSSILSNSFSKQLEDNVNKYVGVQL 328 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIF+ +I+S++ A+ + + Q + K + A+ + K Q A+ Sbjct: 329 NIPIFNNYRIRSSVNIAKIRFENAKVAEQAAKNSLNKVINQAILDLRAADKRFYATQSAL 388 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL--AKSYVDLYIA 445 + K++ ++ Y G S +++ + K E D AK L VD Y+ Sbjct: 389 DASKEAFEVTKKRYEVGLVSAIELNTSQVNFNKSEFDFIQAKYDLLFRSKVVDFYLG 445 >gi|296134732|ref|YP_003641974.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] gi|295794854|gb|ADG29644.1| RND efflux system, outer membrane lipoprotein, NodT family [Thiomonas intermedia K12] Length = 486 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 89/419 (21%), Positives = 184/419 (43%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 WW F++ L++L+ AL N ++ A R+ A+ + + L P A++S Sbjct: 62 WWADFHNPELDRLIATALTDNPSLQVAQARLEQARAQVQGADSALKPKLGAAVSSTRQQF 121 Query: 108 --------FIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 + N +++ L W++D FG+ R +++++ +A AQ A++ + + Sbjct: 122 SNNYIYGPYGSNWYYDNSALLQGSWELDFFGKNRQTLQAAIGEAHAAAAQEQAARVLLAA 181 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y++ ++ Q L + ++L + G + + + AE+ I Sbjct: 182 NVASAYVNLARLIAIQNVLQQTLQQREHMLKLVQDRVRAGLETTVQEKQALAEVPQIRLQ 241 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + ++ L G + + Q + P + +P + PA LI R DI Sbjct: 242 LDQTAVLITQARNLLAALTGQ-GPQATATLAPQLDAL-PAMNLPDTL--PASLIGRRADI 297 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++ ++ + A++ YP ++L G AL G + GP L LPIF Sbjct: 298 VAARWQVEAALHGVKAARAAFYPDVNLTAFAGFSALGFSQWLTGGSQTLGVGPALTLPIF 357 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G +++ +R + A + T+++A+ EV +A+ + + + + Q A++ + Sbjct: 358 EGGALRAQLRGKSAQADAAIAQYNGTLVDAVHEVADAIAARQSIGQQIVQQQQALDAAQD 417 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++ L Y+ G + L +L ++ + K++ VDL K Q V L A+G GYN Sbjct: 418 ALRLVDQRYKAGLSNYLTVLTVQSSVLKLQQAGVDL---KAQALADDVALIRALGGGYN 473 >gi|167644774|ref|YP_001682437.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gi|167347204|gb|ABZ69939.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 502 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 87/433 (20%), Positives = 172/433 (39%), Gaps = 36/433 (8%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSS----YASIS 105 KWW SFND L L++ AL++ A ++ A+ +R PS+ A + Sbjct: 65 KWWTSFNDPQLTALIETALEKAPDARSAQAALDEARAARRGQIRQLYIPSTPLTGSAKKT 124 Query: 106 HRFI------PNL--------KTNSTGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVD 150 H I P L N G D W++D++G+RR + N L +A + Sbjct: 125 HTEILDQKVPPGLFPFTQGGDTENYAGDFDVSWELDVWGRRRAARQVVDNDLAAARFAYE 184 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+ ++ +++ SY +AR ++ A + + + + K G + + EA Sbjct: 185 GARASLAAQVAQSYFEARGLAVQLDDARETARINGSLRDFAVKKAKAGLIATSESDRAEA 244 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + ++ + L+ + L+G + + P PI +P Sbjct: 245 DQAQSQAQVEDLQGQLNAARRTLLILIGRGIDPLASLPIDAALDTAP----PIPATVPDA 300 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS----- 325 L+ RPD+R + +L + + + + L P+L+L + S P + + Sbjct: 301 LLARRPDVREAQARLTSASGNLKVNELALLPTLNLTPGVGWAKGVS-PAFGSTTGATTST 359 Query: 326 ------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G + +P+ + + ++I + ++ + +++ V A E ENA+ ++ D Sbjct: 360 TTSSWTLGASVSIPVLNIPALLADIDAQNARTRQAAVAYEKAVQTAYGEAENAMAQLSAD 419 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 ++ V L +++ Y G L L E++ L+ A+ Q Sbjct: 420 QRRVGLLTEGEARARRAYEAGRTGYSLGLTDLTTTLQSEQSWRAARAALTSARTQALLRA 479 Query: 440 VDLYIAIGSGYNP 452 V Y A+G G++P Sbjct: 480 VQAYKALGGGWSP 492 >gi|52840674|ref|YP_094473.1| outer membrane efflux protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627785|gb|AAU26526.1| outer membrane efflux protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 450 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 95/420 (22%), Positives = 179/420 (42%), Gaps = 46/420 (10%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 L WW+ F D L++L+ L+ N+ I A + A+ + V+ P+ I + Sbjct: 54 LAWWKQFQDPELDRLIDTGLKTNMDIHIAMANLQQAQGELQQVKLSWIPN--VQILGGYS 111 Query: 110 PNLKTNSTGQLDSDWK------IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 N G W + L+ Q++ + + +A +D +L +I ++ + Sbjct: 112 TNPALGVPGGFYGIWPSYILNIMQLYTQQKRAQYQVQYHQAA---IDGLRLTLIGQVAAA 168 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE-------AEIKSIE 216 Y E++ + +++ K I LS + G + + L +L+ A+IK I+ Sbjct: 169 YFTLIAQLEQLKLLYKLDRDLKSLIALSRKEINIGLKNDIDLAQLQSNERLIAAQIKPIK 228 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNR 275 +I + + R ++ L+ K NNF + G +PA ++ NR Sbjct: 229 HNIVVSQNALRYLINENPGLI------------KSKNNFAQLDFTRFKPGSLPATVLGNR 276 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--DNSFPGYN---THWSFGPKL 330 PD++ E L + A I +A SD +P + L+ I H D++F +W+ P Sbjct: 277 PDMKMAEYSLKAARAGIFVAYSDFFPVMQLDDFIGEAHLPDSTFEQATDAYVNWTINPNT 336 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 GKI S + ++ +Y+ +TV +KEV+NA ++ ++ +HA Sbjct: 337 L------GKI-SVSKGVYNAKLAEYV---KTVRLILKEVDNAFSANKRMREQFLSYRHAQ 386 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E ++ L + G S ++L+ + + + + AK +LA S V LY + GY Sbjct: 387 EDYQHKYKLQNGLLKSGLMSYKELLESKVYLDTLALSTNQAKLELAMSLVMLYQDLAGGY 446 >gi|294636415|ref|ZP_06714800.1| cation efflux system protein CusC [Edwardsiella tarda ATCC 23685] gi|291090335|gb|EFE22896.1| cation efflux system protein CusC [Edwardsiella tarda ATCC 23685] Length = 174 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 9/177 (5%) Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKG 338 E L + A IG A++ +PS+SL+G + + + F WSF PK+ LPIF+ G Sbjct: 1 EHLLQAADANIGAARAAFFPSISLSGGVNSSGSDLAGLFSAAGGMWSFVPKVTLPIFNGG 60 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++N++ AE Q+ + ++ + A KEV++AL++ + + Q ++ + ++ Sbjct: 61 RNRANLQLAELRQQQSIVNYENKIQAAFKEVDDALSTRDSLADQLMAQQRYLDALQATLQ 120 Query: 399 LSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + Y G S L++LD ERA T + +DL A++ + + L+ A+G G+ Sbjct: 121 RARGLYAHGALSYLEVLDAERALFTTRQTLLDLRYAQQ---ANEITLFAALGGGWQA 174 >gi|66044298|ref|YP_234139.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63255005|gb|AAY36101.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 494 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 88/480 (18%), Positives = 207/480 (43%), Gaps = 43/480 (8%) Query: 3 ILRAIFSL----FIVLLAGCTVGPEYTKP-----HMPLLPTQFSIGNSKNLINIDTLKWW 53 I+R ++ + F ++++GC +G K H L T +I ++ + +WW Sbjct: 5 IIRGLWPVGILAFTLVISGC-IGTHGIKSQGSLLHADSLVTDQAIQSAALDAHWPAAQWW 63 Query: 54 ESFNDTSLNKLVKIA----------------LQQNLTILQATERINAAKENILSVRADLF 97 ++ D L+ V++A + + ++ E + + N +R D + Sbjct: 64 RAYGDAQLDCWVEMATLGSPSLALAAARVRQARAMAQVAESAESVQL-QGNASLMRHD-W 121 Query: 98 PSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDS-AYAQVDIAKLNV 156 P ++ L + +DL+G+ R+ +L + A+ A+L + Sbjct: 122 PEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +YI R+ IA L ++ ++L+ + G + + + E + Sbjct: 182 QENVVRAYIQLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPEAH 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 I L+++ ++ + ++ L G + +Q+ + + L +P +PA+L+ RP Sbjct: 242 RQIDALQEAIALSRNQLAALAGKGPGQGA-ALQRPALSLHTALTLPS--ALPAELLGQRP 298 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLY 331 D+ ++A I +A YP++ L GS++ G + GP + Sbjct: 299 DVVAARWQVAAQARGIDVAHGGFYPNVDLVGSLSYMATGGGVLEFLTGSKLGYKVGPAIS 358 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQH 388 LPIFD G++++ + RA ++ + + +T++ A+K V + L S+++ + + + Sbjct: 359 LPIFDAGRLRAELGRASAAYDQAVAHYNQTLVMALKSVSDQLIRRASMDKQQALAAE--- 415 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +V +K+ +++I +++G L++L+ + + + ++Y L +A+G Sbjct: 416 SVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALGG 475 >gi|255066026|ref|ZP_05317881.1| putative outer membrane multidrug resistance lipoprotein [Neisseria sicca ATCC 29256] gi|255049571|gb|EET45035.1| putative outer membrane multidrug resistance lipoprotein [Neisseria sicca ATCC 29256] Length = 466 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 161/391 (41%), Gaps = 32/391 (8%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLL-PTQFSI--GNSKNLINIDTLKWWESFNDTSL 61 R I + + +LA C ++ K PL PT +S+ G S +LI WW D L Sbjct: 8 RGICIIAVSVLAACA---QFGK-QAPLEEPTVYSLPDGKSASLIQDG---WWLQLKDNKL 60 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRA---DLFPSSYASISHRFIP-----NLK 113 N+LV A+Q + + A R A+ + A S + P + Sbjct: 61 NQLVAQAIQTSTDLRIAKARFEQAQAQLGITEAAGKTQIGMSARGVGMYVAPKPASSRID 120 Query: 114 TNST-----GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 T+ T + W D +G+ R I + L + + A++ + + + Y Sbjct: 121 TDHTLLLANAAVQGSWTFDFWGKNREQIAAVLGRRQAILYEAHQARIELANAVAKQYFIW 180 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + ER ++ + ++L +K +L + SL LE + ++ + +LE+ Sbjct: 181 QALSERQALVQERINLSEKMQQLVSRRIHANLMPAQSLYPLELASQQLQLEKTSLEQQIA 240 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 H ++ L G L + P +P+N I ADL+ RPDI Q+ L Sbjct: 241 KVRHALAVLSGN-VPRALSEQEPGRMGVVP--VVPVN-RIHADLLAARPDIAAQKSLLES 296 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN--THWSFG--PKLYLPIFDKGKIKSN 343 + + +++ YP++ L L H ++F T G P + LPIF G ++S Sbjct: 297 KLHTVKSTEAEFYPNIELKALAGLGHIDAFNVVRGKTSGMLGIVPAINLPIFTSGALQSK 356 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALT 374 + + EQ + +TVLNA++ +A+ Sbjct: 357 LAGKRAEYNEQVAVYDQTVLNAMRSAADAVV 387 >gi|52425186|ref|YP_088323.1| TolC protein [Mannheimia succiniciproducens MBEL55E] gi|52307238|gb|AAU37738.1| TolC protein [Mannheimia succiniciproducens MBEL55E] Length = 457 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 90/421 (21%), Positives = 191/421 (45%), Gaps = 35/421 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPS---SYASISH 106 WW +ND LN++V+ AL N + +A +N+A + N+L ADL PS S +S + Sbjct: 50 WWSLYNDAQLNRVVEQALVNNKDLAKAAISVNSALYQANLLG--ADLVPSFNGSTSSSAS 107 Query: 107 RFIPNLKTNST----GQLDSDWKIDLFGQRRHIESSLANLDSAYA---QVDIAKLNVISK 159 R I + NST G L+ + +DL+ RR +++ A S A ++ +L++I+ Sbjct: 108 RPI-DRHDNSTISHGGSLNVSYTLDLW--RRLADAASAGEWSYQATQQDMEATRLSLINS 164 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ +Y + + I+ + ++ Y + + + QG + S + + + + + + Sbjct: 165 VVVTYYQIAYLNDAINATNDTINYYSQINGIMQNRLAQGVEDRASTDQAQQAVLTARNSL 224 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNR 275 + + + + + LL +E L+ NF PN+ +N+ +P I NR Sbjct: 225 ISYQTAKKTAEQTLRNLLNLKPSEPLNI------NF-PNILNVQTAGVNLNVPVSTIGNR 277 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPI 334 PD+R +L + + +P ++L ++ + +N + G + LP Sbjct: 278 PDVRGYLYRLNSAFKDAKATQKSWFPEITLGAGLSSSGTRVNNAFNNPVAAGTIGISLPF 337 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 D +K N++ +E++ +++++ A+ E++ + + ++ T L+ + K Sbjct: 338 LDWNHVKWNVKISEAAYDTARTNYEQSITTALNEIDTNYFAYTQAQQNFTNLKQKYDYDK 397 Query: 395 KSMSLSMINYRQGRYSLLDIL---DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + Y G L D L + ERA+ +V + AK + ++ +Y ++ Y+ Sbjct: 398 RIAQYYKNRYDAGVSDLKDWLSAINTERAS---QVSILNAKYSVIQNENAIYSSMAGYYS 454 Query: 452 P 452 P Sbjct: 455 P 455 >gi|254447791|ref|ZP_05061256.1| outer membrane transport protein, putative [gamma proteobacterium HTCC5015] gi|198262571|gb|EDY86851.1| outer membrane transport protein, putative [gamma proteobacterium HTCC5015] Length = 464 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 97/462 (20%), Positives = 202/462 (43%), Gaps = 34/462 (7%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLN 62 RA+ SL + L G E PL P+Q +I S++L + + T +W + F SL Sbjct: 12 RALISLGLASLLTACAGVE------PLPPSQAAIPGSESLASSPLVTPRWPQLFQAPSLQ 65 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN--LKTNS-TGQ 119 L++ AL N A R+ AA N +P+ A ++ + N +KT+S + Sbjct: 66 PLIREALAHNQDFKAARSRLEAAFANTEGD--SRWPTINAEVNRQRRDNDGIKTDSASAA 123 Query: 120 LDSDWKIDLFGQRRHIESSLA--NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 L +W++D++G R E+++A S A A+ ++ + + +++ A + ++ Sbjct: 124 LSVNWELDVWG-RLAAENAVAAYTAQSLAADTQWAQYSLAANVAKAWLTAVANHAQWQLS 182 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 Q +++ ++ + G L + AE+ + + +++F + + ++ LL Sbjct: 183 QQRQASLEQSTDIIENGYENGTRDALEVYSARAELANSAAAELQAQRAFENSRYQLNVLL 242 Query: 238 G-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAKI 292 G +P Q+ +L P N +PA+L + RPD+R + LA A+ Sbjct: 243 GRFPG---------QAIELPESLPAPDN-ELPAELSSSLLERRPDVRAAQLTLAAQEAQW 292 Query: 293 GIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +AK + +P +L D + G + W+ L +P+F + + +R Sbjct: 293 AVAKRNRWPRFALTAQAGNASDRLSSVASGNDPFWTAIGNLSMPLFQGKALAAEQQRQAH 352 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + ++ T L A +E NA+ + + Q A + +++ ++ +Y G Sbjct: 353 LYEAELANYRSTALTAFQEALNAIDNTTSLHRRWQLAQSASDSARQAEEQALESYLSGIS 412 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L +R+ A+ ++ +DL++A+G ++ Sbjct: 413 NFNTWLQAQRSAFDSASATITAQSAWLQNRIDLHLALGGDFD 454 >gi|209517700|ref|ZP_03266537.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209501875|gb|EEA01894.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 506 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 90/419 (21%), Positives = 191/419 (45%), Gaps = 26/419 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 W + F D L L+ ALQ + T+ QA R+ A+ + +AD P Sbjct: 66 WVDQFGDAQLKALIAEALQGSPTLAQARARVAQAQAYSETAKADTLPRVDASYTLTRQQY 125 Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVI 157 SS A I + + +T + G L + + +DL+G+ R + ++++ ++ A ++ KL + Sbjct: 126 SSTALIPPPYSGSWQTENKGLLSASYDLDLWGKNREALRAAVSEEAASEADEEVVKLTLD 185 Query: 158 SKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y + AR + R IA Q + ++ ++ + G +++ EA + + Sbjct: 186 TSIARTYNELARLYALR-DIAQQEVTRREQIDRITAGRIATGLDTEVERKTAEANLSTSR 244 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + L+ S + ++ LLG L + + + ++ +P N+ PADL+ RP Sbjct: 245 ARVSALDGSIVTTRYQLAALLGKGPDRGLA-IARPTLGVGDDVRLPDNL--PADLLGRRP 301 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLP 333 DI ++ ++ AK++ YP ++L+ +I A + S G ++LP Sbjct: 302 DIAAARWRVDAITHEVKEAKAEFYPDINLSAAIGFDAFGFGRLLSAASRTASVGSAIHLP 361 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++++ ++ + T+ +T++ A+ V + I + Q A + Sbjct: 362 IFDGGELRAQLKGRYAEFDYAVATYNQTLIGALSGVATQIAQIRSSDTQLVDAQAAQQAA 421 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGY 450 + L+ Y+ G + L +L+ + + D +IA ++ + ++L ++G GY Sbjct: 422 SDADRLATTQYKAGLTNQLTVLNAD--VTALNADEAIANLKMNRRDQQIELASSLGGGY 478 >gi|322513943|ref|ZP_08067018.1| NodT family efflux transporter [Actinobacillus ureae ATCC 25976] gi|322120169|gb|EFX92127.1| NodT family efflux transporter [Actinobacillus ureae ATCC 25976] Length = 469 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/396 (20%), Positives = 172/396 (43%), Gaps = 61/396 (15%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH 106 +WW S+ND LN ++ A+ NL + ++ +N A N V A+L P S AS + Sbjct: 51 QWWRSYNDNQLNTVIDQAIANNLDLAKSAIAVNKALYNANLVGANLVPTFSGSGSASAAK 110 Query: 107 RFIPNLKT--------------NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI- 151 + ++ ++T + + +DL+ +R +S A + D+ Sbjct: 111 KIHSTAQSGIGLGQASTGTSTISNTAAFNLSYTLDLW-RRLADTASAAEWEHKATIEDLK 169 Query: 152 -AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A+L++I+ ++ +Y ++K+ IS+ + + Y++ + + K GA +L++ + + Sbjct: 170 SARLSLINSVVTTYYQIAYYKDAISVIERTIKNYEQISRILNNKLAAGAIDRLAVEQAQQ 229 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------- 262 + +++ + + + LL N +PN +P Sbjct: 230 ATLNARNNLIAYRTNLKTAEQTLRNLL----------------NLKPNQSLPSRYPSILA 273 Query: 263 -----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 +++ +P I NRPD+ + +L + + + +P+++L SI+ ++ Sbjct: 274 VKLQGVDLNVPVSTIANRPDVTARLNRLRSAFNSLTATEKSWFPTVTLGASISGNAAKAY 333 Query: 318 -----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 P N SF LP D ++K+N++ +ES + +++T+ +A+ E++ Sbjct: 334 NVADNPVGNGVLSFD----LPFLDWNRVKNNVKISESDYMTAKLNYEQTLTSALNEIDTH 389 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMIN-YRQG 407 + + + LQ A E H K +S N Y QG Sbjct: 390 YYTYEQARSSYATLQKAYE-HDKRISTYYKNRYEQG 424 >gi|300778869|ref|ZP_07088727.1| RND efflux system, outer membrane lipoprotein, NodT [Chryseobacterium gleum ATCC 35910] gi|300504379|gb|EFK35519.1| RND efflux system, outer membrane lipoprotein, NodT [Chryseobacterium gleum ATCC 35910] Length = 466 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 198/416 (47%), Gaps = 37/416 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFI 109 W L L+ + N ++ A E++N + + +DL+PS + A+ S+ + Sbjct: 63 WINDLKTPQLENLINEGMLYNADLIIAKEKLNQIELAMEIAGSDLYPSVSAVANTSNNLV 122 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--VISKLIPSYIDA 167 + + L ++W+IDL+G+ + S +A S ++ AK ++ + I I Sbjct: 123 SDTQIRRLA-LKANWEIDLWGKNKS--SQMAATSSYFS----AKYQNTLLHQSIAGMIAK 175 Query: 168 RHFKERISIA-----HQILDLYKKNIELSHLKFTQ---GATSKLSLVKLEAEIKSIESDI 219 +F ++IA +I + +K+ +L L Q G + L + + AEI S++ + Sbjct: 176 AYF---LNIAGNIQEDKIENYIQKSKDLEKLYVIQKKIGTANALDISNISAEIISLQGYL 232 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 ++ + + ++ L G YP + + N+ + + P L+ NR DI Sbjct: 233 EKVKNANLQSRRSLELLTGKYPEGKL------ATQNYFNAVNSSVPESFPLQLLENRSDI 286 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-----FGPKLYLP 333 + ++ + ++ AK+ PSLS++ S T ++ N+ +S G L P Sbjct: 287 QANHFQIEKAFYEVQQAKAARLPSLSISASFG-TAGSNVESINSLFSNPLLKVGGGLVSP 345 Query: 334 IFDKGKIKSNIRRAESSAQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +F+ GK+K N+ ++S Q+Q + + + VLNA+ EVE++LT++ +K +T AV Sbjct: 346 LFNNGKLKKNV-EIKTSRQKQVVEEYSKAVLNALNEVESSLTNLRSIEKQITYTTSAVNE 404 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 K ++SL+ + G + ++ +R K E++L + Q ++LY+A+G+ Sbjct: 405 LKNNISLTEKQIKVGTNNSFVLIRKQRDLLKNEMNLINLELQYRIERINLYMALGA 460 >gi|330974318|gb|EGH74384.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 376 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/348 (21%), Positives = 162/348 (46%), Gaps = 18/348 (5%) Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N N T L + +++D +G +S+L L ++ +L +++ + Y Sbjct: 36 NNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASRFDQATVELTLLANVADRYAQTLA 95 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E+ IA L + + L ++ G+ + L L + + + + + ++P +++ Sbjct: 96 AREQGRIAELNLTNAQDVLRLVQTRYESGSATALELAQQKNLVATQQRELPRVQQLANEQ 155 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + ++ LLG P + LH + + + I G+P++L+ RPD+ E LA + Sbjct: 156 LITLAALLGQP-VQNLHLADQPFDTLN---WPDIGAGVPSELLTRRPDLAKAEADLAAAQ 211 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAE 348 A + +A++ + P L+L+ + + + + S L PIF+ G++ + +A Sbjct: 212 ANVTVARAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKAT 271 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMIN--YR 405 + +E T++ ++N+ +VE AL SI D++ + H EL + + + Y+ Sbjct: 272 ARQEELLETYRGAIINSFADVEKALNSIRGLDQQ---RYWHEEELKQAQTAFRIAQSRYQ 328 Query: 406 QGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G LL +L+ +R V V L +A+ Q + + LY A+G + Sbjct: 329 EGAEDLLTVLETQRTLYLAQDVSVQLRLARLQ---ASIALYKALGGSW 373 >gi|87118337|ref|ZP_01074236.1| putative outer membrane transport protein [Marinomonas sp. MED121] gi|86165971|gb|EAQ67237.1| putative outer membrane transport protein [Marinomonas sp. MED121] Length = 479 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 88/376 (23%), Positives = 168/376 (44%), Gaps = 23/376 (6%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQA--TERINAAKENILSVRADLFPSSYASISHRFIPN 111 E +D LN L+ A++ N + Q T +I AA+ N V + L P+ AS N Sbjct: 68 ELIDDEGLNTLLLQAIKANPDLQQVLLTLKIRAAQLN--QVDSSLLPTLEASFKANNDGN 125 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN-VISKLIPSYIDARHF 170 TG L W+ DL+ Q + A S+ + A L+ +I++++ +++ Sbjct: 126 QSPYYTGGLTVSWEADLWSQIADESQATAKAFSSQQALYQASLDSLIAEIMSAWLAVIAQ 185 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + + + KN L ++ G L + + S + + + + Sbjct: 186 SRALKVEEERVSVLAKNESLLLNRYKNGNGDLEGLDGARSSLASAKESVEEYREDLAIKQ 245 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 N+ LLGY E + Q P + +P+ +P + RPD+ + + Sbjct: 246 RNLMRLLGYNKIE-----EIQMPTEYPEVLVPL-AQLPEQTLARRPDLMSAFYDIEQADL 299 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPG----YNTHWSFGPKLYLPIFDKGKIKSNIRR 346 ++ +A DL PSLSL S LT S P + W +L LP+F +G+++ I Sbjct: 300 EVQVAYKDLLPSLSLTAS--LTDVASSPSNALFASPVWYLLGQLTLPLFQQGELELAIDV 357 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK---LQHAVELHKKSMSLSMIN 403 A A + Y ++ +L+A+ EVENA I ++K + + L+ A+ + +++ N Sbjct: 358 ARYEAAQSYQIYRAALLDAVFEVENA---IAQEKSLELRQHYLEEALMAERNNLAQYQKN 414 Query: 404 YRQGRYSLLDILDIER 419 ++ G ++D+L +++ Sbjct: 415 FKSGSVDIVDLLSVQQ 430 >gi|260768315|ref|ZP_05877249.1| outer membrane protein of RND family multidrug efflux pump [Vibrio furnissii CIP 102972] gi|260616345|gb|EEX41530.1| outer membrane protein of RND family multidrug efflux pump [Vibrio furnissii CIP 102972] Length = 456 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/429 (18%), Positives = 187/429 (43%), Gaps = 31/429 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + +L ++L GC E + + + P Q+ G S+ + +WW SF D L+ + Sbjct: 7 STIALCVLLATGCVARSELPEQQLDV-PAQWQNGQSQPQEQAIS-RWWTSFGDPQLDGWI 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNST----GQL 120 L N + AT + A+ +D +P ++S R P +S+ L Sbjct: 65 DQVLASNSDLALATLTLRQARLEAGLATSDTYPDVSGTVSADRSKPLDGGDSSKSYQASL 124 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DL+G+ + ++ + + + ++++ Y + +R+ +++ Sbjct: 125 SVSYELDLWGKLSAAKDEAMWTALATQQEREATAQSLVATTAQLYWQIGYLNQRVELSNN 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ ++ + L+ ++ G+ ++L++++ + + +E+ + V+ + L Sbjct: 185 DINDAQETLALTESQYRHGSVTRLNVLEAQRTLAGLEATHRDYLQQRTEAVNAFAILFDQ 244 Query: 240 PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P + + P+ +P + G+PAD++ RPD++ +L ++A + ++ Sbjct: 245 PPQDLASRIPAL-----PDYAVPAVEAGVPADVLSRRPDVKQALFELKSTLAAKDYSDTN 299 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPKLYLPIFDKGKIKSNIRRAES 349 +PSL+L G++ G +T S G L +P + +++ N A+ Sbjct: 300 YFPSLTLTGALG--------GSSTELRKLLSDPIGSLGADLTMPFLNWNEMQLNRDIAQV 351 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + IT+++T+ A ++V+NAL++ KLQ + ++ + Y G Sbjct: 352 KYESAIITYRKTLYAAFQDVDNALSAKENYAFQAEKLQKQYDAAAEAARIYQSQYEYGAI 411 Query: 410 SLLDILDIE 418 + +LD + Sbjct: 412 EITTLLDAQ 420 >gi|148360954|ref|YP_001252161.1| outer membrane efflux protein [Legionella pneumophila str. Corby] gi|296105980|ref|YP_003617680.1| outer membrane efflux protein [Legionella pneumophila 2300/99 Alcoy] gi|148282727|gb|ABQ56815.1| outer membrane efflux protein [Legionella pneumophila str. Corby] gi|295647881|gb|ADG23728.1| outer membrane efflux protein [Legionella pneumophila 2300/99 Alcoy] Length = 447 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 98/439 (22%), Positives = 187/439 (42%), Gaps = 48/439 (10%) Query: 33 PTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 P QF S + + + + L WW+ F D L++L+ L+ N+ I A + A+ + Sbjct: 32 PKQFPSSPRDYRPVQELPYLAWWKQFQDPELDRLIDTGLKTNMDIHIAMANLQQAQGELQ 91 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK------IDLFGQRRHIESSLANLDS 144 V+ P+ I + N G W + L+ Q++ + + + Sbjct: 92 QVKLSWIPN--VQILGGYSTNPALGVPGGFYGIWPSYILNIMQLYTQQKRAQYQVQYHQA 149 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A +D +L +I ++ +Y E++ + +++ K I LS + G + + Sbjct: 150 A---IDGLRLTLIGQVAAAYFTLIAQLEQLKLLYKLDRDLKSLIALSRKEINIGLKNDID 206 Query: 205 LVKLE-------AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 L +L+ A+IK I+ +I + + R ++ L+ K NNF Sbjct: 207 LAQLQSNERLIAAQIKPIKHNIVVSQNALRYLINENPGLI------------KSKNNFAQ 254 Query: 258 NLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--D 314 + G +PA ++ NRPD++ E L + A I +A SD +P + L+ I H D Sbjct: 255 LDFTRFKPGSLPASVLSNRPDMKMAEYSLKAARAGIFVAYSDFFPVMQLDDFIGEAHLPD 314 Query: 315 NSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 ++F +W+ P GKI S + ++ +Y+ +T+ +KEV+N Sbjct: 315 STFEQATDAYVNWTINPNTL------GKI-SVSKGVYNAKLAEYV---KTIRLILKEVDN 364 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A ++ ++ +HA E ++ L + G S ++L+ + + + + A Sbjct: 365 AFSANKRMREQFLSYRHAQEDYQHKYKLQNGLLKSGLMSYKELLESKVYLDTLALSTNQA 424 Query: 432 KRQLAKSYVDLYIAIGSGY 450 K +LA S V LY + GY Sbjct: 425 KLELAMSLVMLYQDLAGGY 443 >gi|312879279|ref|ZP_07739079.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] gi|310782570|gb|EFQ22968.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] Length = 435 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 94/400 (23%), Positives = 176/400 (44%), Gaps = 27/400 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISH 106 +L E+ D SL + + + L+ NL + +A E ++ A+ + R+ L P S+ S + Sbjct: 24 SLGASETPADLSLEEALSLGLETNLEVARAKEELDKAEGLLTQARSALLPALSAVGSATG 83 Query: 107 RFIPNLK--TNSTGQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPS 163 R + K TG L + G R E +L N A ++ + V K+ + Sbjct: 84 RNEDSSKPEREGTGSLALSQTLYAGGVIRAGEQQALLNRQKAQESLEETRETVALKVYEA 143 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + E + A L Y K + + G +++L L ++E + ++ D+ T Sbjct: 144 FCGVLLRGENLKTAEDALGYYDKATKDLRKRLELGLSTRLDLSRMEQQRENARVDVITAA 203 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIP---ADLIRNRPDIR 279 + + TLL P + +L + +++ P A + RPD+ Sbjct: 204 NNLSAARIVLFTLLRLPP--------EAPTVVSGDLTVTAVSVDAPSLAAQALNRRPDLL 255 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFD 336 A + IAK+ + P+++L GS +D S P NT W + +P+FD Sbjct: 256 ALRTAAAIQKQAVDIAKAGMRPTVTLTGSYQFVYD-SNPSSNTKDDDWIATLNVSVPLFD 314 Query: 337 KGKIKSNIRRAESSA---QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 GK + + + ES+ EQ ++ +E + A EV +A ++N + VT + ++L Sbjct: 315 GGKTRGKVTQ-ESAVLRQTEQSVSQKEDAVRA--EVVDAGLTLNSAAEAVTSARKNLDLA 371 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++S+ L+ + YR+G + LD+L + + LS A+R Sbjct: 372 RESLRLAEVGYREGVDTQLDVLAARTSVTEARQKLSGAQR 411 >gi|330974193|gb|EGH74259.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. aceris str. M302273PT] Length = 490 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 96/396 (24%), Positives = 173/396 (43%), Gaps = 47/396 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLI---NIDTLKWWESFNDTSLNKL 64 ++L+GC++ P Y +P +P+ Q S S +L + D L E L L Sbjct: 25 LVLSGCSLIPAYQRPALPVPVDQVSAVVPASSTSADLTLTADEDALAA-ELSPKGELRGL 83 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIPNL 112 ++ AL N A R+ A+ RAD FP+ A + R+ ++ Sbjct: 84 LQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDI 143 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S G SD+++D FG+ R + + + L S Y Q A+ +I+++ +++ R Sbjct: 144 SIASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALIAEVARAWLAERLA 200 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDIPTLE 223 A + + ++ + + QGA S +L + + +++ SD Sbjct: 201 AAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRLDTLTAQQQVQDAASDHANAS 260 Query: 224 KSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ + + ST L P T L ++ + NL P+ + R DIR + Sbjct: 261 QALLL-LTGYSTALPATKPDTPELTAALVETPAWLSNL--------PSQRLLERFDIRQR 311 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKG 338 E+ L S A IG A++ +PS+ L+ + L D+ F + W F P+L LP+FD G Sbjct: 312 EEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGG 371 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + ++N+ A+ Q +++ V NA +E+ LT Sbjct: 372 RNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 407 >gi|332663873|ref|YP_004446661.1| NodT family RND efflux system outer membrane lipoprotein [Haliscomenobacter hydrossis DSM 1100] gi|332332687|gb|AEE49788.1| RND efflux system, outer membrane lipoprotein, NodT family [Haliscomenobacter hydrossis DSM 1100] Length = 474 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 95/479 (19%), Positives = 203/479 (42%), Gaps = 48/479 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDTSLN 62 F+L + L GC V P +L T+ ++ +D+L W + F+D +L Sbjct: 9 FALLLTSLWGCKV------PDAGVLKTENKATPARFNHAVDSLAANHPNWRQYFSDPNLI 62 Query: 63 KLVKIALQQNLTILQATERINAAKENILS----------VRADLFPSSYASISH------ 106 L+ AL +N + + I+ +L+ V A L A + Sbjct: 63 ALIDTALVKNQELNIVKKEIDIRNNEVLARAGEYRPFVNVGAGLGAEKVARYTRDGAVEK 122 Query: 107 -------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL---NV 156 + P T+ G + + W++D++ + R+ + A + +A ++ N+ Sbjct: 123 NLEIKPGKEFPEPLTDLMGGVYASWELDVWHKLRNAKK--AAVSRYFASIEGKNFLVTNL 180 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I++L SY + + I + + L + + + + ++L++ + EA++ + + Sbjct: 181 IAELANSYYELMALDNLLDIINTNIGLQQNILGIIKQEKEAAKVTQLAVNRFEAQVLNTQ 240 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + + R + I + + F + + S + + G+P+ L+ NRP Sbjct: 241 NR----QYEIRQRIVEIENRINFLIGRFPQPVIRSSTAYNSAPVDSVLAGLPSQLLANRP 296 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLP 333 DIR E +L + I +AK++ YPS + + L N N + + P Sbjct: 297 DIRQAELELEAAKIDISVAKANFYPSFGIKAGLGLQAFNPVYLINPESILVNLAGDMMAP 356 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + +K IK+ A + + ++ ++LN EV N L+ + + V + Sbjct: 357 LVNKNAIKATYFNANAQQIQAVYNYERSILNGYIEVVNQLSGMRNFSDSYSTKAREVAIL 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL-SIAKRQLAKSYVDLYIAIGSGYN 451 +S+++S +R R +++L +R + +++L I +QL+ + V++Y A+G G+N Sbjct: 417 TQSITISNSLFRSARADYMEVLLTQREALESKMELIEIRMKQLS-ARVNVYRALGGGWN 474 >gi|153840571|ref|ZP_01993238.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ3810] gi|149745765|gb|EDM56895.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ3810] Length = 210 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 + + LI +Y+ + ER+ +A L+ ++ ++L G S L L + +A + ++ Sbjct: 2 ITADLIHNYLQYQGASERLELAKSNLEDQRRTLDLVGKVVRSGYGSDLDLAQAKATLAAM 61 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ES +P LE + + + H ++ LLG P T+ + KQ + P + + +G+P+DL++ R Sbjct: 62 ESLVPQLEIAQQAHKHRLAVLLGEPLTQVEIRLSKQHSV--PVMQDMVPVGLPSDLLKRR 119 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYL 332 DIR E+++A ++ + +D YP L G+ L + D+ F + W + Sbjct: 120 TDIRLAEREMAALNEELAASVADQYPKFFLTGAPGLSASSFDDLFSSDSFGWMGAAGVSW 179 Query: 333 PIFDKGK 339 +FD G+ Sbjct: 180 NLFDGGR 186 >gi|224437693|ref|ZP_03658640.1| hypothetical protein HcinC1_06945 [Helicobacter cinaedi CCUG 18818] gi|313144142|ref|ZP_07806335.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129173|gb|EFR46790.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 509 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 175/411 (42%), Gaps = 27/411 (6%) Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 +D +L+ L+ IAL+ N +L RI AK + A + P+ SI+ +I + Sbjct: 83 DDKTLHSLLYIALENNTNVLTMASRIKQAKSQVKINTASMLPTINGSINSSYIDRRTLSQ 142 Query: 117 T-----------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPS 163 + + W+IDLFG+ + S + D A AQ ++A ++++I+++ Sbjct: 143 STMIRPGANSVNASVGMSWEIDLFGKLNALRQS-SKKDYATAQSNLAYAQISLIAEVASL 201 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE------AEIKSIES 217 Y R + +A L+ L H++ ++ L+ + A + ++ Sbjct: 202 YFTLRENANALLLAKNTLE------NLQHIESINAEKLQVGLIDIATHQSFVANTTTQKN 255 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRP 276 + +L +F N + + LL + E ++ + + P + +P++++ +RP Sbjct: 256 NYESLLYTFEQNKNALLVLLNIESGELHKHIDFMESTYSFPQITTFYIDKMPSEILLSRP 315 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 DI L + K AK+ PS+SL+GS+ +S + + + P+ + Sbjct: 316 DIESSLYALHSQLYKQTNAKAARLPSISLSGSVGEILYSSAGAGSLVFQIANSITAPLLN 375 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + +K N + ++E Y T Q + A+ E+ENAL I K+ Q+A E+ K+ Sbjct: 376 RTSLKQNYLIQKELSKEAYYTLQNNINTALGEIENALFDIESKKRQTQNTQNAYEVAIKA 435 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + +G D L E + L K S + L+ A+G Sbjct: 436 HESNRAKNTRGLLDTNDFLTQENTYLSSQTQLFTVKTNEILSLITLFKALG 486 >gi|300311423|ref|YP_003775515.1| NodT family protein [Herbaspirillum seropedicae SmR1] gi|300074208|gb|ADJ63607.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Herbaspirillum seropedicae SmR1] Length = 487 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 92/462 (19%), Positives = 199/462 (43%), Gaps = 34/462 (7%) Query: 15 LAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 +AGC + P+ + +L +I + + WW+++ D L++LV A+ Sbjct: 21 MAGCADQGGIQPQAQVRDVAVLDAGQAIRQAASEAGWPQRAWWQAYGDAQLDQLVTRAVA 80 Query: 71 QNLTILQATERINAAKENILSVRADLFPSSYASIS-------------HRFIPNLKTNST 117 N ++ A R+ A+ + A PS+ +S F L N+T Sbjct: 81 GNPSMAVAAARVRQAQSMAVVAHAGELPSAQLDVSVGRKDWSDNVYYGAAFRNKLTWNNT 140 Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA---KLNVISKLIPSYIDARHFKERI 174 L + +DL+ R+ ++L D +A A +L++ ++ +Y+ + Sbjct: 141 ATLGLSYNVDLW--DRNKNATLRAQDEMHAVAADARAAQLDLEGNVVRTYVQLALQYGLL 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +L +K ++L+H +F G ++L + + E+ + I L ++ + + ++ Sbjct: 199 DNTEALLKEEQKILDLAHRRFKGGLGTQLEITQAESPLPETRRQIEALHENIALIRNQLA 258 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 LLG + + Q +L +P +PADL+ RPDI ++ + I + Sbjct: 259 ALLG-AGPGAADGVTRPGMQLQTSLGLPS--ALPADLVGRRPDISAARWRVEAAAKGISV 315 Query: 295 AKSDLYPSLSL-------NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 AK+ YP+++L L S P T ++GP + LPIF+ G+++ + A Sbjct: 316 AKAAFYPNINLLAGIGPAAAGGGLFSFLSAPNLQT--TYGPAISLPIFEGGRLRGQLGAA 373 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + + + + A+K + + + ++ + + Q +V+ +K++ ++ Y++G Sbjct: 374 SAGYDIEVEHYNALLSQALKGISDQVVTLQSVARQQEQAQQSVQAAQKNVDIATRAYQRG 433 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L + + + + + Q +Y L A+G G Sbjct: 434 LTDYLNVLHAQTQWLRQQQIVQQLQAQRLAAYAALQTALGGG 475 >gi|149197620|ref|ZP_01874670.1| outer membrane channel protein [Lentisphaera araneosa HTCC2155] gi|149139190|gb|EDM27593.1| outer membrane channel protein [Lentisphaera araneosa HTCC2155] Length = 464 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 98/460 (21%), Positives = 195/460 (42%), Gaps = 27/460 (5%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSI-----GNSKNLINIDTLKWWESFNDTSLNKL 64 L +L + C+ K M P ++ G K I WW SF D L++L Sbjct: 9 LMGLLFSSCSSWDALKKEPMQDAPVDENVEARWLGEGKEQTEIGE-DWWRSFGDPELDRL 67 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST------- 117 ++ A ++ + A R+ A++ + +++ S ++S F + +ST Sbjct: 68 IQKAAKEGFDLTLARNRVLLAQKELSLAQSEGQISGELNLSQDFNRVNRDSSTNKEAIAG 127 Query: 118 GQLDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 G L W+ D++G+ + + +LA + A D L ++ ++ +Y R + E + + Sbjct: 128 GSLS--WQADIWGRISSLSAGALAEYQATQADYDAVALQIVYQVGVAYFSLREYDELLVL 185 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 L++ K + + G S + EAE + +++ LE+ + + ++TL Sbjct: 186 HQDALEISDKLYQYYKDRHELGLESDELFLAQEAENLRLRANVKDLERLRHLQQNTLATL 245 Query: 237 LGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 +G +F + + N + ++ + A+L+ RPD+ E ++ + A Sbjct: 246 MGEIPGQF----KLEPKNLTDAVSFVDKPDVLNANLLERRPDLVAAELRIKSAWNYKEAA 301 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG--PKLYLPIFDKG-KIKSNIRRAESSAQ 352 ++ P +S+ S A T +S G + W+ G P + PI D + I R + Sbjct: 302 RAAHLPDVSVTLSGA-TDSSSISGLFSDWAVGIMPSINFPILDPTLDAQEEIARVKLKNA 360 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 E +++TV AI EVENA+ ++ + ++ +E K+ S + G + L Sbjct: 361 ED--VYRKTVSTAIGEVENAIINLQKYEERRVLELQRLERLLKAQEKSQVRLENGLITQL 418 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 ++L +R D+ L + LY A+G + P Sbjct: 419 ELLQYQREVLASREDVLNLNMLLLSETITLYNALGGPWKP 458 >gi|170744645|ref|YP_001773300.1| RND efflux system outer membrane lipoprotein [Methylobacterium sp. 4-46] gi|168198919|gb|ACA20866.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacterium sp. 4-46] Length = 508 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 95/426 (22%), Positives = 179/426 (42%), Gaps = 25/426 (5%) Query: 12 IVLLAGCTVGPEYTKPHMPL------------LPTQFSIGNSKNLINIDTL-KWWESFND 58 ++L GC GP++ P P+ LP G D WW F Sbjct: 30 LLLCGGCVAGPDFVPPAAPVILRYGERAPPRRLPAPGPDGTQVLRPGADGPHAWWRPFGS 89 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPN 111 L++LV+ L + T+ QA + A+ + + RA L P+ Sbjct: 90 RRLDRLVRRGLAASPTVEQAEAALRQARSDTEAARASLLPNLSLDLARRGGGGIGPAGGA 149 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L + + + DLFG RR +E+ A A A D A L + ++ I Sbjct: 150 LYGLYGASVAASYTPDLFGGIRRAVEAQEAREAVAAAHRDAAALALSGNIVAGAIQEAIL 209 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E I+++ IL + + L ++ G+ +S++ E+ I+S E+ + + Sbjct: 210 SEEIAVSEAILRQDRDQLALVKVRHAAGSERIVSVLNQESLIRSQEAALIASRMARVQAR 269 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 H ++ L+G P + + + P +P+++ P+ L+ RPDIR +L + A Sbjct: 270 HRLAVLIGLPPSAYAEPSFRLGELTLPR-RVPLSL--PSRLLARRPDIRAAAAQLHAASA 326 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAES 349 +IG+A +D+ P ++L ++ + + G L P+ D G + + A Sbjct: 327 EIGVAAADMLPRVTLTANLGASAATIAALAASSAWGAGLGLAQPLLDGGAQAARRQAAVE 386 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + ++ TVL A++ V +AL ++ D I+T + A L + +++ + + Y G Sbjct: 387 AYAAAAAAYRATVLAALQTVADALAALEADAGILTAVLEAEALARDALAAARVQYEAGAV 446 Query: 410 SLLDIL 415 + D+L Sbjct: 447 TYADLL 452 >gi|33600874|ref|NP_888434.1| putative outer membrane protein [Bordetella bronchiseptica RB50] gi|33568474|emb|CAE32386.1| putative outer membrane protein [Bordetella bronchiseptica RB50] Length = 473 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 92/435 (21%), Positives = 190/435 (43%), Gaps = 27/435 (6%) Query: 38 IGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF 97 +G S + +WW+ + D L+ LV AL + ++ A R+ A + RA L Sbjct: 36 LGLSAAGVQWPARQWWQRYADPQLDALVSEALASHPSLAAARARLAQANAAVAGARAPLL 95 Query: 98 PSSYA--SISHRFIPN--LKTNSTG---------QLDSDWKIDLFGQRRHIESSLANLDS 144 P A +++ +P + TG LD +++D +G+ R + + Sbjct: 96 PRVDANYTLTREHLPKNYIYPPPTGGSVVSDNRLALDFSYELDFWGKNRARLQAAVSQRD 155 Query: 145 AYAQVDIAKLNVISK-LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 A A N++++ ++ SY++ ++ + + ++L + ++L+ + G +++ Sbjct: 156 AADADAQAARNLLARAIVRSYLNLQNAFAQREVLQRVLSQRAEVVDLTRGRKAAGLDTEV 215 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI 263 + + E+ + + ++ E + + ++ L G A P IP Sbjct: 216 EVKQAESSLAAGRVELTQNETTIAQLRNQVAALAG--AGPVRGQALAPVALTAPGGVIPA 273 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGY 320 N+ P +L+ +RPD+ + + I AK++ YP+++L G AL Sbjct: 274 NV--PLELLGHRPDVTAARWRAIAARHGIEAAKAEFYPNINLVAFAGFEALGTGRLLDAG 331 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + GP + LPIF G++ +N+ + A + +TVL+A+++ +A+ ++ Sbjct: 332 SRAAGIGPAITLPIFHGGELNANLAGRRADADLAVSDYNQTVLDAVQQTADAIDALRLLG 391 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAK 437 + + + A E + L++ YR G + L +L + A+++ DL I QL Sbjct: 392 REQAEQRQAREAIDAAYDLAVKRYRAGLGNYLSVLIAQTGVLTQARLDTDLRIRAYQLD- 450 Query: 438 SYVDLYIAIGSGYNP 452 DL A+G GY P Sbjct: 451 --ADLAYALGGGYAP 463 >gi|315634208|ref|ZP_07889497.1| NodT family efflux transporter [Aggregatibacter segnis ATCC 33393] gi|315477458|gb|EFU68201.1| NodT family efflux transporter [Aggregatibacter segnis ATCC 33393] Length = 456 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 85/387 (21%), Positives = 171/387 (44%), Gaps = 42/387 (10%) Query: 6 AIFSLFIVLLAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTL-----KWWESFNDT 59 A+ + LAGC +G Y Q S+ N K +I WW +ND Sbjct: 8 ALAVVMATTLAGCANIGDSY----------QASLDNYKQYEDITKQYNIKDNWWALYNDA 57 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNS- 116 LN++V+ AL N + +A +N A + A+L P S A S + N NS Sbjct: 58 QLNRVVEQALANNKDLAKAAVSVNRALYSANLAGANLIPAFSGAAKSSAQKDINRGGNSA 117 Query: 117 ---TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD---IAKLNVISKLIPSYIDARHF 170 TG L+ + +DL+ RR + + A S A ++ +L++I+ ++ +Y + Sbjct: 118 ITHTGALNVSYTLDLW--RRLADVADAAEWSHKATIEDMESTRLSLINSVVTTYYQIAYL 175 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + IS + + Y + + QG S+ + + + + +++ TL+ + + Sbjct: 176 NDAISTTQESIKYYTDISNIMKNRLAQGVADSASVDQAQQAVLTARNNLITLQTNRKNAE 235 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLY----IPINIGIPADLIRNRPDIRYQEKKLA 286 + LL + L+ NF P++ + +N+ +P +I NRPD++ + +L+ Sbjct: 236 KTLRNLLNLKPDDTLNI------NF-PHILSVKTVGVNLNVPVSVIANRPDVKGYQARLS 288 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP---KLYLPIFDKGKIKSN 343 + + +P ++L GS++ N G T S G + LP + +K N Sbjct: 289 SAFKNAKATEKSWFPEITLGGSLSRNATNQ-TGATTFSSIGAGNVGITLPFLNWNTVKWN 347 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVE 370 ++ +E+ + + +++++ A+ +V+ Sbjct: 348 VKISEADYETARLNYEKSITTALNDVD 374 >gi|257485523|ref|ZP_05639564.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 369 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/348 (22%), Positives = 163/348 (46%), Gaps = 18/348 (5%) Query: 111 NLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 N N T L + +++D +G +S+L +L ++ +L ++ + Y Sbjct: 29 NNTNNFTSDLTASYEVDFWGGIAAGRDSALQSLRASEFDQATVELTLLGNVADRYAQTLA 88 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E+ IA L + + L ++ G+ + L L + + + + + ++P +++ Sbjct: 89 AREQGRIAELNLANAQSVLRLVQTRYDSGSATALELAQQKNLVATQQRELPRVQQLANEQ 148 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + +++ LLG P + + F + I G+P++L+ RPD+ E +LA + Sbjct: 149 LISLAALLGQP----VQNLNLGDQAFATLNWPDIGPGLPSELLTRRPDLAKAEAELAAAQ 204 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAE 348 A + +A++ + P L+L+ + + + S L PIF+ G++ + RA Sbjct: 205 ANVTVARAAMLPKLTLSARLGTEATRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDRAT 264 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYR 405 + +E T++ ++N+ +VE AL SI D++ + H EL + + +++ Y Sbjct: 265 ARQEELLETYRGAIINSFADVEKALNSIQGLDQQ---RYWHEEELKQAQTAFNIAQSRYE 321 Query: 406 QGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +G LL +L+ +R V V L +A+ Q + + LY A+G G+ Sbjct: 322 EGAEDLLTVLETQRTLYQAQDVSVQLRLARLQ---ASIALYKALGGGW 366 >gi|165976257|ref|YP_001651850.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876358|gb|ABY69406.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 464 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 117/474 (24%), Positives = 215/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWKNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------HRFIPNLKTNS 116 LQ NL I A R+ + +AD + AS S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRQADQGINIGASGSTGGGVSDVNLDRVNPDHKQIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI S I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITSEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQTLKRYIQGRFNAGQATAYELNEIDGQISAIQAKQATLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N +P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKAPQAF--RLQKNRNALIKIPNMPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|296105220|ref|YP_003615366.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059679|gb|ADF64417.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 203 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 105/190 (55%), Gaps = 9/190 (4%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTH 323 + + ++ RPDI E +L + A IG A++ +PS++L ++ + + F + Sbjct: 15 LSSQILLQRPDIMEAEYQLKAADANIGAARAAFFPSITLTSGLSASSTELSSLFTSGSGM 74 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+F PK+ +PIF+ G+ K+N++ AE Q+ + +++ + +A K+V + L + + + Sbjct: 75 WNFIPKIEIPIFNAGRNKANLKLAEIRQQQSVVNYEQKIQSAFKDVSDTLALRDSLSQQL 134 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYV 440 Q ++ + ++ + Y G S +++LD ER AT + +DL+ + RQ+ + + Sbjct: 135 ESQQRYLDSLQITLQRARGLYASGAVSYIEVLDAERSLFATQQTILDLTYS-RQVNE--I 191 Query: 441 DLYIAIGSGY 450 +L+ A+G G+ Sbjct: 192 NLFTALGGGW 201 >gi|257465305|ref|ZP_05629676.1| probable outer membrane protein [Actinobacillus minor 202] gi|257450965|gb|EEV25008.1| probable outer membrane protein [Actinobacillus minor 202] Length = 461 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/384 (20%), Positives = 163/384 (42%), Gaps = 46/384 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW +ND LN LV A+Q NL + ++ +N A N V A+L P+ Sbjct: 52 QWWRGYNDAQLNALVDQAIQNNLDLAKSAIAVNKALYNANLVGANLVPTFSGSGSTSASK 111 Query: 100 SYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 S S+ + T ++T + + IDL+ +R +S A + D+ +L++ Sbjct: 112 GVGSTSNNVSTGVSTISNTASFNLSYTIDLW-KRLADTASAAEWEHKATIEDLKSTRLSL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ ++ +Y ++++ I++ + + Y++ + K GA L++ + + + Sbjct: 171 INSVVATYYQIAYYRDAIAVTEKTIKNYEEISRILRNKLAAGAIDSLAVEQAQQSTLNAR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------------I 263 + + L + + LL N +PN I + Sbjct: 231 NSVVALRANLNTAEKTMRNLL----------------NLKPNQPIAARYPSILSVKLQGV 274 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 + +P I NRPD+ + ++L + + + +P+L+L S++ + G N Sbjct: 275 DTNVPVSAIANRPDVTARLQRLQSAFKTLTATEKSWFPTLTLGASLSSKAEK--MGDNPV 332 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S LP D ++++N++ +E+ + +++T+ +A+ E++N + + + + Sbjct: 333 GSGVFSFDLPFLDWNRVQNNVKISETDYVTARMNYEQTITSALNEIDNYYYAYKQSRNSL 392 Query: 384 TKLQHAVELHKKSMSLSMINYRQG 407 LQ E KK + Y QG Sbjct: 393 GLLQQTYEKDKKISAYYKNRYNQG 416 >gi|303251302|ref|ZP_07337480.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252465|ref|ZP_07534361.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649844|gb|EFL80022.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860057|gb|EFM92074.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 464 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 114/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWQNWQDPQLTTLIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRKADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQALKRYIQGRFNAGQATAYELNEIDGQISAIQAKQSTLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKTPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G + ++ LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLAS-----LRVQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|302038534|ref|YP_003798856.1| putative multidrug resistance outer membrane protein [Candidatus Nitrospira defluvii] gi|300606598|emb|CBK42931.1| putative Multidrug resistance outer membrane protein [Candidatus Nitrospira defluvii] Length = 502 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 104/491 (21%), Positives = 205/491 (41%), Gaps = 71/491 (14%) Query: 13 VLLAGCTVGPEYTKP----HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 + GC P+ +P P + + S+ L N +WWE F + LN L++ + Sbjct: 21 LFFGGCAWIPKGDQPAQYLEAPEMTETLAEVTSR-LQNWPADRWWEQFGNPELNGLIEQS 79 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-------SYASIS-HRFIPNLKTNSTG-- 118 L N + A R+ A + A L P +Y IS H L G Sbjct: 80 LNDNPGLKHAAARLRQATSLVKVEGARLLPFLEADASLTYERISQHGVFAALNPEVAGIR 139 Query: 119 -------QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 L ++ D +G+ R +E++L + + A+ +L + + + +Y + Sbjct: 140 IMYGIINPLSFRYEFDFWGKNRAMLEAALGHAAAEEAETAEVRLRLTTGIARAYFRGQAL 199 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATS----KLSLVKLEAEIKSIESDIPTLEKSF 226 ++++ I I+ + ++ L+ +F G + K+++ EA K + + Sbjct: 200 QQQLDIVKTIVGIRRELKTLAETRFRLGLDNDQPVKIAVADYEAAFKRQAA----IRDQL 255 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----ADLIRNRPDIRYQE 282 + H ++ L+G E H K P + +P + P L+ +RPD+ Sbjct: 256 DVQRHLLARLVGKGPDEGAHLFAK------PKVIVPSQMAAPDHLSLGLLVHRPDLAAAL 309 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNS--------FPGYNTHWSFGPKLY 331 + + + +A + YP++ L G + ALT F G + + P L Sbjct: 310 YRAHAASRLVRVATTQFYPTIDLTGFVGFNALTLAKGTDKLANFLFSGQSFTYGLAPGLR 369 Query: 332 LPIFDKGKIKSNI--RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 +P F+ G+++ + +RAE A + + +T+L A++EV ++L++ +I+ Sbjct: 370 MPWFEGGRLRGELGAQRAEYDAAVEL--YNDTLLEAMREVADSLSAWQTTNEIMAS---- 423 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAK----SYVDL 442 HK+ ++ ++R + L++ LD +R + ++ A R L + VDL Sbjct: 424 ---HKRLVASLGDDWRLAKVRLVNGLDDDREVLRHRYPVLEQEYALRALESDQLVAAVDL 480 Query: 443 YIAIGSGY-NP 452 ++G GY NP Sbjct: 481 IESLGGGYHNP 491 >gi|268591059|ref|ZP_06125280.1| outer membrane efflux protein [Providencia rettgeri DSM 1131] gi|291313865|gb|EFE54318.1| outer membrane efflux protein [Providencia rettgeri DSM 1131] Length = 472 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 115/489 (23%), Positives = 212/489 (43%), Gaps = 66/489 (13%) Query: 1 MNI--LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFS----------IGNSKNLINID 48 MNI L I +LF++ G EY +P + L P Q+ + S +N+ Sbjct: 1 MNIKSLYIISALFLLNGCGSFTRTEYQRPELTL-PQQWDDKIRQSGANDVMTSVQALNL- 58 Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--------SS 100 T WW++F D L++L+ L+ N + A ++ A+ ++ P S+ Sbjct: 59 TENWWDNFKDPLLSQLINQVLENNNDLATAAIKLKLARSTAGLANTNITPDFSLGGSASN 118 Query: 101 YASISHRFIPNLKTNSTGQLDSDWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNV 156 SI H P + + + L +++IDL+G+ R E + Y + +N Sbjct: 119 TKSIRHGTSP--QESYSSNLTLNYEIDLWGKLARIREKNEWEAIATEQDYHATALVVINT 176 Query: 157 ISKLIPSYIDARHFKERIS--IAHQ-ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 ++L Y + ++I IA Q I + ++ I+ +L G S+L ++ + + Sbjct: 177 TAQL---YWNIALLNQQIDNLIASQKIAEKSQQQIKSWYLA---GKVSQLDFLQSQQTVI 230 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 S ++++ L K + + ++ LL PA + + + N I I P ++ Sbjct: 231 SRKNELRRLIKERDSSRNALALLLNRPAEQHVRELTA----LNRNQRIEILNATPLAVLA 286 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW------SFG 327 RPDI+ E +L ++A AK YP+LSL G++ N+ + W G Sbjct: 287 QRPDIQAAESRLRSALADSDAAKLSFYPTLSLQGAL-----NAGSQLFSQWFSDPTRVVG 341 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + LP +K I +++ Q+ + ++ A+ EV+NA+ + +I +LQ Sbjct: 342 GSISLPFIQWNTVKLTIEQSDLQVQQAAVAFRSAAYTALSEVDNAMEARFAADEIRQQLQ 401 Query: 388 HAVELHKKSMSLSMINYRQGR--YSLL-----DILDIERATAKVEVDLSIAKRQLAKSYV 440 ++ L ++ + L+ YR G Y L D+L IE + A+ + D A Q Sbjct: 402 QSLSLSQQRLKLTSSRYRAGAVDYQTLLNAQDDLLTIENSLAQNQYDYLYATLQ------ 455 Query: 441 DLYIAIGSG 449 L++A G G Sbjct: 456 -LWLAQGGG 463 >gi|323136027|ref|ZP_08071110.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] gi|322399118|gb|EFY01637.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] Length = 513 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 98/491 (19%), Positives = 205/491 (41%), Gaps = 61/491 (12%) Query: 6 AIFSLFIVLLAGC-TVGPE---YTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 A+ +L + LA C PE + P P + + + + WW F + L Sbjct: 11 ALIALSLAPLAACQATAPERAEFADP--PAMERTLAQAGASSRAGWPEENWWRRFRNAEL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------------SSYASIS 105 +++V AL + + +A +R+ + A L P AS + Sbjct: 69 DRVVDKALADSPGLHKAADRLRQTEAVSEVEGARLLPLLDFDMGMRQTRIPTHGVVASYN 128 Query: 106 HRFIPNLKTNS-TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPS 163 +T + L ++ D +G+ R ++++L + A+ +L + + + + Sbjct: 129 RALAGTERTMAFINPLSFRYEFDFWGKNRAALDAALGETAAQEAEYAQTRLLLSAGVARA 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI---ESDIP 220 Y R +++IA + L ++ + ++ +F G ++ ++ + AE+++ E+ Sbjct: 189 YFRGRAAARQLAIAQAMTKLRRELVAIAQNRFRTGVDTQDAIAQATAEVEAAIKREAGAS 248 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 L +F+ ++ ++ L+G + L P + P +++ +RPD+ Sbjct: 249 AL-LAFQQDL--LARLMGEGPDAARDLFAGKHLVASVRLAPPAKL--PVEMLAHRPDLSA 303 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNG---------SIALTHDNSFPGYNTHWSFG--PK 329 + + +I AK+++ PS+ L G S ++ F ++ +S+ P Sbjct: 304 AMHRAEAAAERIHAAKAEILPSIDLVGFAGLEASRNSTQISELGKFLFRSSAFSYAVTPG 363 Query: 330 LYLPIFDKGKIKSNI--RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +LPIF G++ + RRAE E ++ ET+L A ++V +AL ++ + + + Sbjct: 364 FHLPIFQGGRLSGRLEGRRAEYD--EAVDSYNETLLAAAQQVADALANVKQTRTALDAQN 421 Query: 388 HAVELHKKSMSLSMINYRQG---RYSL----LDILDIERATAKVEVDLSIAKRQLAKSYV 440 V + + ++ +R G R + L +LD A A +E D A V Sbjct: 422 RLVAARRTELDMARSRWRNGIRDRREIVLLALGVLDQSYAQAALEGDNQAAT-------V 474 Query: 441 DLYIAIGSGYN 451 DL+ A+G GY Sbjct: 475 DLFQALGGGYT 485 >gi|238750605|ref|ZP_04612105.1| outer-membrane efflux lipoprotein [Yersinia rohdei ATCC 43380] gi|238711253|gb|EEQ03471.1| outer-membrane efflux lipoprotein [Yersinia rohdei ATCC 43380] Length = 466 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 89/440 (20%), Positives = 191/440 (43%), Gaps = 23/440 (5%) Query: 23 EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI 82 EY +P + + P ++ + +S ++ WWE+F+D L++ + L N + A ++ Sbjct: 25 EYQQPMLSV-PDEWRVKDSGGGYLRHSVHWWENFDDPQLSQSINRMLLSNNDLAAAGLKL 83 Query: 83 NAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKIDLFGQ-RRHI 135 A+ +L P + S +L N+ + L +++DL+G+ R Sbjct: 84 QQARLTAGLTNTNLHPDVSLTGSGSNTRSLNENTQPRESYSTSLGLSYELDLWGKLARTR 143 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 E S +++ L++I Y ++I L + + ++L + Sbjct: 144 EQSAWLVNATEQDRQETALSLIGTTADLYWQLAKLNQQIDYQQTALAISQDTLKLVSSRR 203 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G S++ L++ + + ++ LE+ R + LL A + Y Q + + Sbjct: 204 AAGDASEIELLQAQQTLLDRQNQSHHLEQQ-REAARSAMALLFNRAPD---YRQAEPKSL 259 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 +PI +P +I RPD++ E +L ++A +AK + YP+LSL ++ + Sbjct: 260 DLQQQVPIATLLPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPTLSLGATL-----D 314 Query: 316 SFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 + + W P LP ++ I +++ + Q + ++ V +A+K+V Sbjct: 315 AGSAVFSQWFSNPSRTLSINSALPFLQWNTVQLTIEQSKLAVQLAAVDFRSKVYSALKDV 374 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 ++A+T+ ++ ++L ++ +SL+ Y+ G S +LD + A E +L Sbjct: 375 DDAMTARLSYQQQKQNQWQNLQLSQRRLSLTNSQYQAGAVSFQTLLDAQDALLTSETNLL 434 Query: 430 IAKRQLAKSYVDLYIAIGSG 449 + S + L++A+G G Sbjct: 435 ELQYNYLNSTMKLWLALGGG 454 >gi|82776661|ref|YP_403010.1| putative outer membrane channel protein [Shigella dysenteriae Sd197] gi|309789026|ref|ZP_07683621.1| outer membrane oprM domain protein [Shigella dysenteriae 1617] gi|81240809|gb|ABB61519.1| putative outer membrane channel protein [Shigella dysenteriae Sd197] gi|308923297|gb|EFP68809.1| outer membrane oprM domain protein [Shigella dysenteriae 1617] Length = 275 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 98/190 (51%), Gaps = 5/190 (2%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-- 323 G+ +D++ RPDI+ E L + A IG A+++ +P++SL S + D + +H Sbjct: 84 GVSSDVLLRRPDIQEAEHNLKSANADIGAARANFFPTISLTASAGVGSD-ALSSLFSHGM 142 Query: 324 --WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 WSF P + LP+F G + +R AE+ + T+++TV +A K+V NAL ++ Sbjct: 143 QIWSFTPSVTLPLFTGGSNLAQLRYAEAQKRGLIATYEKTVQSAFKDVANALARRTTLEE 202 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + + V+ ++++ + + Y+ G L +L +R+ + +L + + + Sbjct: 203 QLDAQRQYVKAEQQTVDVGLRRYQTGVGDYLTVLTAQRSLWSAQQELLALQLTDFTNRIT 262 Query: 442 LYIAIGSGYN 451 L+ ++G G + Sbjct: 263 LWQSLGGGMS 272 >gi|307250076|ref|ZP_07532039.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857873|gb|EFM89966.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 464 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWQNWQDPQLTTLIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRKADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQALKRYIQGRFNAGQATAYELNEIDGQISAIQAKQSTLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKTPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|289663272|ref|ZP_06484853.1| outer membrane channel protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 487 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 106/485 (21%), Positives = 208/485 (42%), Gaps = 78/485 (16%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSI-----------GNSKNLINIDTLK--WWESFN-D 58 VL AGC++ P Y +P + + P F N+ + ++T + + ++F D Sbjct: 21 VLSAGCSLTPAYQRPPVSV-PATFGSPQAASAPDQPDANATAAVRLNTQERAFLQAFAPD 79 Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISH 106 L LV+ AL N +A ++ A+ +A P+ ++ Sbjct: 80 RDLQPLVERALAHNGDFRRAALQVEQARAQYGIAQASRLPTIAVGAQQLRQHFDNPALDA 139 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSY 164 R+ +L + G ++++D FG+ + + + L S Y + D A+ +I++++ +Y Sbjct: 140 RYQQDLVIANAG--IGNFEVDFFGKLQAMSEAARQRYLASTYGR-DAARGALIAEVLRAY 196 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLK-FTQGATSKLSLVKLEAEIKSIESDIPTLE 223 R + + HL+ + + L++ + + ++ I D + Sbjct: 197 TTERTAAQ----------------AMQHLQSLDADSAALLAIAERQYQVGLIARDERDAQ 240 Query: 224 KSFRMNVHNISTLLG----YPATEFLHYMQKQSNNFQP-NLYIPINIGIPAD-------- 270 + H ++ L G A L + + P +L I PA Sbjct: 241 RRQADQAH-VAALQGNDNHAAAVRALQLLAGYDSTPVPGDLQGLIAADTPASAWRALDSS 299 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 300 LLLQRPDIQQAELELRAANADIGAARAAFFPSITLSTSVGTASDGLSGLFSAGHGLWSFM 359 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + + + + Sbjct: 360 PQLNLPLFDGGRNRANLDLAQVRKRADVVAYEQAIESAFREVANALDAHATLSQAEPRSR 419 Query: 388 HAVELHKKSMSLSMINYR-----QGRYSLLDILDIERA-TAKVEVDLSIAKRQLAKSYVD 441 VE ++ + L+ ++ R + R +LL ER TA+ E+D RQ S + Sbjct: 420 EQVE--REQLRLARMHERMDAGLEDRSALL----AERTRTAQTELDYLDTARQRVLSRIA 473 Query: 442 LYIAI 446 L+ A Sbjct: 474 LFQAF 478 >gi|218506121|ref|ZP_03503999.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli Brasil 5] Length = 74 Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 2/76 (2%) Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + H+I+TLLG PA+ ++ + + QP + IN GIPADLIRNRPDIR E+ LA + Sbjct: 1 SAHHIATLLGLPASALVNELLRGGG--QPVFHGGINSGIPADLIRNRPDIRVAERDLAAA 58 Query: 289 VAKIGIAKSDLYPSLS 304 A IG+A++ LYPS+S Sbjct: 59 TANIGVAEAQLYPSIS 74 >gi|94497882|ref|ZP_01304447.1| probable outer membrane multidrug resistance lipoprotein [Sphingomonas sp. SKA58] gi|94422610|gb|EAT07646.1| probable outer membrane multidrug resistance lipoprotein [Sphingomonas sp. SKA58] Length = 504 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/291 (20%), Positives = 127/291 (43%), Gaps = 31/291 (10%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+L + + + +Y D + + + LD+ + +L+ + G ++ S+ + +A Sbjct: 176 AQLALTTGIANAYADLARLYDEAEVQQRTLDIRLASQKLAAERRVNGLETRGSVRQADAT 235 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD- 270 + + ++ + + + + H I+ L+G L + P +G+PAD Sbjct: 236 VSAAKAQLAGAKVAIALRQHQIAALIGAGPDRGLSITRPVKGQLSP-------LGLPADV 288 Query: 271 ---LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHW 324 L+ RPDI + + +I +A++D +P++ L G +L ++ F G Sbjct: 289 TTNLVARRPDIAAALARTEAAAKRIKVARADFFPAVRLGALIGVQSLGYNTVFTGNGAQG 348 Query: 325 SF-----------------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 GP + LP+F G ++ R A + + T+ +TVL A + Sbjct: 349 GASPFLDTLFKKDSIFGNAGPAISLPLFHGGALRGQYRSARAVYDQAVATYDKTVLTAYQ 408 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 EV +A+TS ++ + + A+ + + ++ Y+ G LD+L++E Sbjct: 409 EVADAVTSRRALEQRLADARAALAASRDAYDVAQKRYKGGLSPYLDVLNVE 459 >gi|145629426|ref|ZP_01785224.1| hypothetical protein CGSHi22121_08403 [Haemophilus influenzae 22.1-21] gi|145634962|ref|ZP_01790669.1| hypothetical protein CGSHiAA_08033 [Haemophilus influenzae PittAA] gi|144978269|gb|EDJ88033.1| hypothetical protein CGSHi22121_08403 [Haemophilus influenzae 22.1-21] gi|145267828|gb|EDK07825.1| hypothetical protein CGSHiAA_08033 [Haemophilus influenzae PittAA] Length = 454 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 79/414 (19%), Positives = 181/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V+ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVEQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L GS++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGGSLSSTASTVGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|54293423|ref|YP_125838.1| hypothetical protein lpl0472 [Legionella pneumophila str. Lens] gi|53753255|emb|CAH14702.1| hypothetical protein lpl0472 [Legionella pneumophila str. Lens] Length = 450 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 98/439 (22%), Positives = 187/439 (42%), Gaps = 48/439 (10%) Query: 33 PTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 P QF S + + + + L WW+ F D L++L+ L+ N+ I A + A+ + Sbjct: 35 PKQFPSSPRDYRPVQELPYLAWWKQFQDPELDRLIDTGLKTNMDIHIAMANLQQAQGELQ 94 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK------IDLFGQRRHIESSLANLDS 144 V+ P+ I + N G W + L+ Q++ + + + Sbjct: 95 QVKLSWIPN--VQILGGYSTNPALGVPGGFYGIWPSYILNIMQLYTQQKRAQYQVQYHQA 152 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A +D +L +I ++ +Y E++ + +++ K I LS + G + + Sbjct: 153 A---IDGLRLTLIGQVAAAYFTLIAQLEQLKLLYKLDRDLKSLIALSRKEIKIGLKNDID 209 Query: 205 LVKLE-------AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 L +L+ A+IK I+ +I + + R ++ L+ K NNF Sbjct: 210 LAQLQSNERLIAAQIKPIKHNIVVSQNALRYLINENPGLI------------KSKNNFAQ 257 Query: 258 NLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--D 314 + G +PA ++ NRPD++ E L + A I +A S+ +P + L+ I H D Sbjct: 258 LDFTRFKPGSLPATVLGNRPDMKMAEYSLKAARAGIFVAYSEFFPVMQLDDFIGEAHLPD 317 Query: 315 NSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 ++F +W+ P GKI S + ++ +Y+ +TV +KEV+N Sbjct: 318 STFEQATDAYVNWTINPNTL------GKI-SVSKGVYNAKLAEYV---KTVRLILKEVDN 367 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A ++ ++ +HA E ++ L + G S ++L+ + + + + A Sbjct: 368 AFSANKRMREQFLSYRHAQEDYQHKYKLQNGLLKSGLMSYKELLESKVYLDTLALSTNQA 427 Query: 432 KRQLAKSYVDLYIAIGSGY 450 K +LA S V LY + GY Sbjct: 428 KLELAMSLVMLYQDLAGGY 446 >gi|315180023|gb|ADT86937.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio furnissii NCTC 11218] Length = 456 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/429 (17%), Positives = 184/429 (42%), Gaps = 31/429 (7%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 + +L ++L GC E + + + P Q+ G S+ + WW SF D L+ + Sbjct: 7 STIALCVLLATGCVARSELPEQQLDV-PAQWQNGQSQPQEQAIS-HWWTSFGDPQLDGWI 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----L 120 L N + AT + A+ +D +P ++S L + + L Sbjct: 65 DQVLASNSDLALATLTLRQARLEAGLATSDTYPDVSGTVSADRSKPLDGGESSKSYQASL 124 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DL+G+ + ++ + + + ++++ Y + +R+ +++ Sbjct: 125 SVSYELDLWGKLSAAKDEAMWTALATQQEREATAQSLVATTAQLYWQIGYLNQRVELSNN 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ ++ + L+ ++ G+ ++L++++ + + +E+ + V+ + L Sbjct: 185 DINDARETLALTESQYRHGSVTRLNVLEAQRTLAGLEATHRDYLQQRTEAVNAFAILFDQ 244 Query: 240 PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P + + P+ +P + G+PAD++ RPD++ +L ++A + ++ Sbjct: 245 PPQDLASRIPAL-----PDYAVPAVEAGVPADVLSRRPDVKQALFELKSTLAAKDYSDTN 299 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPKLYLPIFDKGKIKSNIRRAES 349 +PSL+L G++ G +T S G L +P + +++ N A+ Sbjct: 300 YFPSLTLTGALG--------GSSTELRKLLSDPIGSLGADLTMPFLNWNEMQLNRDIAQV 351 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + IT+++T+ A ++V+NAL++ KLQ + ++ + Y G Sbjct: 352 KYESAIITYRKTLYAAFQDVDNALSAKENYAFQAEKLQKQYDAAAEAARIYQSQYEYGAI 411 Query: 410 SLLDILDIE 418 + +LD + Sbjct: 412 EITTLLDAQ 420 >gi|317491540|ref|ZP_07949976.1| outer membrane efflux protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921087|gb|EFV42410.1| outer membrane efflux protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 458 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 92/431 (21%), Positives = 184/431 (42%), Gaps = 44/431 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW++++D LN+LV +AL + T+ +R+ AK RA+ P Sbjct: 27 WWQNYHDPQLNQLVALALADSPTLAIVRQRVEIAKSQTDRARANDLPIVNFGADVERQKM 86 Query: 99 SSYASISHRFIPNLKTNSTG--------QLDSDWKIDLFGQRR-HIESSLANLDSAYAQV 149 S+ + + + +TG L + + +DL+G+ R ++S+L + A++ Sbjct: 87 SAEGVMGPFALDDPAAGTTGPWYTSGTFGLQASYDLDLWGKNRAQVQSALGVYKAKQAEL 146 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK---FTQGATSKLSLV 206 ++L V S + Y D + K I +L++ K+ ++ + +G S L Sbjct: 147 AESELLVSSAVTQIYWDIQTVKALQDI---LLEIKKQESLINDTDRRLYNEGIISSLEQT 203 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY----PATEFLHYMQKQSNNFQPNLYIP 262 + E + I+ I + + N+ ++G PA E + S +P Sbjct: 204 QTETQFAKIDEQIDAYTGNLLLLRANLQAMIGLKNPLPALETVPLPDVAST-------MP 256 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG 319 N+ +L+ RPD++ + S++++ AK+ YP ++L G + AL + F G Sbjct: 257 QNLNY--ELLARRPDLQAAHWYIDASLSEVDAAKAAFYPEINLMGFLQNDALHLSDLFRG 314 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 L LPIFD G++ +N+ + ++ + + V++A+ EV +T ++ Sbjct: 315 SAQQMGGIFGLTLPIFDGGRLNANLSIMQDNSNLSIANYNKAVVSAVTEVTKGITQLDTI 374 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 T V KK SL+ ++ G S +++ + + L + + Sbjct: 375 THQRTHQAVVVAGDKKIWSLTQQRFQAGLISGVNVAKAKLPLLAEQTKLIELHGRWIDAD 434 Query: 440 VDLYIAIGSGY 450 ++L A+G GY Sbjct: 435 INLIKALGGGY 445 >gi|307245703|ref|ZP_07527789.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853405|gb|EFM85624.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 464 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWQNWQDPQLTTLIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRKADQGINIGASGSTGAGVSDVNLDRVNPDHKQIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQALKRYIQGRFNAGQATAYELNEIDGQISAIQAKQSTLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKTPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|237801252|ref|ZP_04589713.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024110|gb|EGI04167.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. oryzae str. 1_6] Length = 491 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 88/400 (22%), Positives = 161/400 (40%), Gaps = 49/400 (12%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFN-------DTSLN 62 L + ++GC++ P Y +P +P+ Q S D + E L Sbjct: 23 LLGIGVSGCSLVPAYQRPALPVPADQLSAALPARETPPDIVLSAEEEALAAELSPKGELR 82 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIP 110 L++ AL N A R+ A+ RAD FP+ A + R+ Sbjct: 83 ALLQSALAFNRDFRVAVLRVGEARAMHGISRADRFPTIAAGVERDRQHFDNAAADERYGQ 142 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDAR 168 ++ S G SD+++D FG+ R + + + L S Y Q A+ +++++ +++ R Sbjct: 143 DIAIASVGV--SDFELDFFGRVRSLSEAARHEYLASTYGQ-QAARSALVAEVARAWLAER 199 Query: 169 ---HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ H ++ K +E QGA S L+ + S + + Sbjct: 200 LSAALQQDAQAVHDARSMWVKAVEEQQ---RQGAVSLDDLLVQRVDTLSAQQQLQDAVSE 256 Query: 226 FRMNVHNISTLLGYPATE--------FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + L GY L ++ + NL P+ + R D Sbjct: 257 HARASQALLLLTGYSTPLPTTPTDTPVLSSALLETPGWLANL--------PSQRLLERFD 308 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPI 334 IR +E+ L A IG A++ +PS+ L + + D+ F + W F P+L LP+ Sbjct: 309 IRQREEALKAGNANIGAARAAFFPSIKLTTGVGIQSDSLRTLFSSGSGAWLFSPQLNLPL 368 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 FD G+ ++N+ A+ Q ++++V NA +E+ L+ Sbjct: 369 FDGGRNQANLDLAQVRQQIAVAEYEQSVQNAFREMSGVLS 408 >gi|193873602|gb|ACF23492.1| outer membrane efflux protein [uncultured bacterium] Length = 195 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 103/187 (55%), Gaps = 3/187 (1%) Query: 125 KIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 ++DLFGQ +R +E++ A+ ++A A +D+ ++NV + +Y + R+ A + + + Sbjct: 1 QVDLFGQIQRALEAASASSEAAQAALDLVRVNVAAGTARAYAEVCTTGLRLQSAQRSVQV 60 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + ++++ G + V+ A+++ +E+ +P LE + ++ ++T G + Sbjct: 61 QAEALDVTERLQRAGRAGTIDAVRARAQLRQLEAAVPPLEAQRQGALYRLATFTGVLPQD 120 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 F M + + +P+ G A L+R +PDIR E+ LA++ A+IG+A ++LYP + Sbjct: 121 FDRDMAGCATPPRVTGTLPVGDG--AALLRRKPDIRQAERXLAEATARIGVAVANLYPKV 178 Query: 304 SLNGSIA 310 SL S A Sbjct: 179 SLGLSXA 185 >gi|198283119|ref|YP_002219440.1| NodT family RND efflux system, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666545|ref|YP_002425348.1| RND efflux system, drug efflux transporter, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247640|gb|ACH83233.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518758|gb|ACK79344.1| RND efflux system, drug efflux transporter, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 477 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 88/419 (21%), Positives = 184/419 (43%), Gaps = 24/419 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFI 109 WW S +LN L+ AL+ N ++ A+ RI AK A L P S+ AS++ + Sbjct: 58 WWTSAQLPALNTLITEALRDNPSLQVASARILQAKAAATDQHAALLPHFSAAASVTQEYF 117 Query: 110 P--------NLKTNSTGQLDS---DWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVI 157 N KT + G L+ + +DL+G+ + ++L + A AKL + Sbjct: 118 SRQGLHAPLNGKTITYGALNPLEMRYHLDLWGRDSDRVRAALGEVRVHQADYAEAKLLLS 177 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++L Y+ +R+ + L+ + L ++ G + ++ E Sbjct: 178 TQLAWHYLLLAGDVQRLRQLVRAEALHTSLLHLEQQRWHDGLSDARAVYLQEEARAGARQ 237 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + ++ + + ++ L+G+ ++ + + + +P N+ P LI +RPD Sbjct: 238 SVADMQAAIAQQRYILAALVGH-GPDWGRDIPAEPLPTLSTITMPRNL--PLRLIAHRPD 294 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYL 332 I + + ++G A++ YP +++ SI L D PG H + GP + L Sbjct: 295 IVAARWETEVAAQQVGAARAAFYPDVNIALFAGWNSIHLG-DLFSPGNLAH-ALGPVISL 352 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ G++++ ++ +S ++ T+L A++E+ L + + ++ + + + Sbjct: 353 PIFEGGRLRAQLKEKNASYIATEDHYRATILGAVREIAGRLATWRQIRQKLRAQRQMIYA 412 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + +L+ + G + + ++ L K Q A+S+V L+ A+G GY Sbjct: 413 AEHTTALAESAFHSGITDKAEAYGAQIQETEIRNQLLALKMQNAQSWVLLHSALGGGYT 471 >gi|66046312|ref|YP_236153.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] gi|63257019|gb|AAY38115.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae B728a] Length = 490 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 95/395 (24%), Positives = 172/395 (43%), Gaps = 45/395 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-TLKWWESF------NDTSLNKLV 65 ++L+GC++ P Y +P +P+ Q S + + D TL E L L+ Sbjct: 25 LVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSADLTLTADEEALAAELSPKGELRGLL 84 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------RFIPNLK 113 + AL N A R+ A+ RAD FP+ A + R+ ++ Sbjct: 85 QSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDIS 144 Query: 114 TNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 S G SD+++D FG+ R + + + L S Y Q A+ +I+++ +++ R Sbjct: 145 IASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQ-QAARSALIAEVARAWLAERLAA 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDIPTLEK 224 A + + ++ + + QGA S +L + + +++ SD + Sbjct: 202 AVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRLDTLTAQQQVQDAASDHANAWQ 261 Query: 225 SFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + + ST L P T L ++ + NL P+ + R DIR +E Sbjct: 262 ALLL-LTGYSTALPATKPDTPELTAALVETPAWLSNL--------PSQRLLERFDIRQRE 312 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 + L S A IG A++ +PS+ L+ + L D+ F + W F P+L LP+FD G+ Sbjct: 313 EALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGGR 372 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 ++N+ A+ Q +++ V NA +E+ LT Sbjct: 373 NQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 407 >gi|148826963|ref|YP_001291716.1| hypothetical protein CGSHiGG_01185 [Haemophilus influenzae PittGG] gi|148718205|gb|ABQ99332.1| hypothetical protein CGSHiGG_01185 [Haemophilus influenzae PittGG] Length = 454 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/413 (18%), Positives = 179/413 (43%), Gaps = 23/413 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 I---PNLKTNSTGQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + N T+ G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ + Sbjct: 110 VDISTNSATSHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVTT 168 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + IS ++ + Y + + QG S+ + + I + ++ E Sbjct: 169 YYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNFE 228 Query: 224 KSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + LL E F H M ++ + +N+ +P +I NRPD+ Sbjct: 229 TQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------VGVNLNVPVSVIANRPDV 280 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDK 337 + + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 281 KAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLNW 340 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 341 NTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRIT 400 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 401 QYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|307256891|ref|ZP_07538669.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864625|gb|EFM96530.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 464 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWKNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRKADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQALKRYIQGRFNAGQATAYELNEIDGQISAIQAKQSTLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKTPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|90577526|ref|ZP_01233337.1| hypothetical protein VAS14_10784 [Vibrio angustum S14] gi|90440612|gb|EAS65792.1| hypothetical protein VAS14_10784 [Vibrio angustum S14] Length = 467 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 107/465 (23%), Positives = 199/465 (42%), Gaps = 43/465 (9%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 + L+ C++ P PH LL + +LINI T WW FND LN+L+ + L N Sbjct: 17 LFLSACSMMPPSEPPHHSLLTAKQVQLYQHDLINIKT-DWWTQFNDPQLNQLITLGLTNN 75 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASIS--------HRFIP-NLKTNSTGQL--D 121 LT+ QA +RI A + + +A PS ++S F P N + ++ G L Sbjct: 76 LTLQQAQQRIELATQQVALAQAGDKPSVNLNVSGGAIGANLDSFSPHNAEYSALGMLLPS 135 Query: 122 SDWKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 ++ D +G+ + I ++ N S AQ AKL + + + SY ++ I Sbjct: 136 FSYQFDFWGKNKAIIAAATNQKLSLEAQAVQAKLLLSAAMTSSYFTLQNNYRLERDIELI 195 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-------- 232 L K + + + +G +K L + + +I + + + ++ K+ + N Sbjct: 196 LRETNKQKSVINDQIKRGLATKAELFQQQGDIDKLSAQL-SMSKTQQQLAKNQLALYVAK 254 Query: 233 ----ISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLAD 287 + TLL P E + KQ NN IPIN +G AD+I N+ + + Sbjct: 255 TPQQLGTLLA-PNAEPI----KQLNNITT---IPINLLGRRADIIANKWLVEANRQ---- 302 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRR 346 I AK+ YP ++L +S + S LP++D G +N Sbjct: 303 ---GIKHAKAAYYPDMNLMVMGVFQKLSSMNPADLFLSGATVATTLPLYDGGVRDANYAS 359 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + + ++VL A+K+ +A+ ++ E + + ++++ + Y++ Sbjct: 360 ANIDYDQAVTVYNQSVLTAVKQASDAIVNLQEALQQQALSVASTTQYQQAYMIFKHRYQR 419 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 G S ++ + + + + + A ++ + L +A+G GYN Sbjct: 420 GLASFSEMNNAQIKWHQQVIQTTNADNATLQNQLQLIVALGGGYN 464 >gi|307609238|emb|CBW98703.1| hypothetical protein LPW_05111 [Legionella pneumophila 130b] Length = 447 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 98/439 (22%), Positives = 187/439 (42%), Gaps = 48/439 (10%) Query: 33 PTQF--SIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 P QF S + + + + L WW+ F D L++L+ L+ N+ I A + A+ + Sbjct: 32 PKQFPSSPRDYRPVQELPYLAWWKQFQDPELDRLIDTGLKTNMDIHIAMANLQQAQGELQ 91 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK------IDLFGQRRHIESSLANLDS 144 V+ P+ I + N G W + L+ Q++ + + + Sbjct: 92 QVKLSWIPN--VQILGGYSTNPALGVPGGFYGIWPSYILNIMQLYTQQKRAQYQVQYHQA 149 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A +D +L +I ++ +Y E++ + +++ K I LS + G + + Sbjct: 150 A---IDGLRLTLIGQVAAAYFTLIAQLEQLKLLYKLDRDLKSLIALSRKEINIGLKNDID 206 Query: 205 LVKLE-------AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 L +L+ A+IK I+ +I + + R ++ L+ K NNF Sbjct: 207 LAQLQSNERLIAAQIKPIKHNIVVSQNALRYLINENPGLI------------KSKNNFAQ 254 Query: 258 NLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--D 314 + G +PA ++ NRPD++ E L + A I +A S+ +P + L+ I H D Sbjct: 255 LDFTRFKPGSLPATVLGNRPDMKMAEYSLKAARAGIFVAYSEFFPVMQLDDFIGEAHLPD 314 Query: 315 NSFPGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 ++F +W+ P GKI S + ++ +Y+ +TV +KEV+N Sbjct: 315 STFEQATDAYVNWTINPNTL------GKI-SVSKGVYNAKLAEYV---KTVRLILKEVDN 364 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A ++ ++ +HA E ++ L + G S ++L+ + + + + A Sbjct: 365 AFSANKRMREQFLSYRHAQEDYQHKYKLQNGLLKSGLMSYKELLESKVYLDTLALSTNQA 424 Query: 432 KRQLAKSYVDLYIAIGSGY 450 K +LA S V LY + GY Sbjct: 425 KLELAMSLVMLYQDLAGGY 443 >gi|303252838|ref|ZP_07338997.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247828|ref|ZP_07529864.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648268|gb|EFL78465.1| outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855630|gb|EFM87797.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 464 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWKNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----------HRFIPNLKTNS 116 LQ NL I A R+ + +AD + AS S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRQADQGINIGASGSTGGGVSDVNLDRVNPDRKQIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQTLKRYIQGRFNAGQATAYELNEIDGQISAIQAKQATLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N +P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKAPQAF--RLQKNRNALIKIPNMPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|315638265|ref|ZP_07893446.1| outer membrane efflux protein [Campylobacter upsaliensis JV21] gi|315481612|gb|EFU72235.1| outer membrane efflux protein [Campylobacter upsaliensis JV21] Length = 452 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 90/410 (21%), Positives = 188/410 (45%), Gaps = 19/410 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW+++ D +L + + L+ N I A + +A + DL+PS ++ + Sbjct: 42 QWWQAYEDANLQEFLAFVLENNKDIKVARTSLLSALARADLIDYDLYPSLDGALGFNRMK 101 Query: 111 NL--KTNSTG---QLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIA--KLNVISKLIP 162 NL TN+ G L+ ++++D++G + ++S A L + + D+A KL+VI+ + Sbjct: 102 NLHKGTNNKGYSNGLNLNYELDIYG--KILDSVRAEELRAKASAYDLASLKLSVINTSLN 159 Query: 163 SYIDARHFKE-RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 S + +F + +I + + + +L K + EL LK+ G +L + +E + ++ T Sbjct: 160 SVFELAYFNDVKIMLENYVSNLEKMS-ELYALKYELGKIEELDFLNVEQSLLKARQNLLT 218 Query: 222 LEKSFRMNVHNISTLLGYPATEFL--HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 E++ + + N+ L+G F H+ + +F+ L P + IP + RPD+R Sbjct: 219 NEQNRNLILKNLQDLIGKKEGFFYLKHFEKASLEDFK--LLKP-DFNIPLQSLAYRPDVR 275 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKG 338 + L + + + PS+SL G++ + + G ++ LP D G Sbjct: 276 AKLNTLKAAFKDYNSVQKSILPSISLGGALRGEAEEFKENFKLEILSGNIQISLPFLDYG 335 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +++ NI+ ++ + + +++ + A E D K+++ L + + Sbjct: 336 RVRQNIKISQFAYEALLFEYEQNLQGAFNEFHLVFKDYESDLKLLSNLSLIKDKQEFITR 395 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + Y G+ L D LD A + +L A+ L ++ ++LY I S Sbjct: 396 AYLQKYELGKSELKDYLDASNALISSQQELLRARYNLFET-INLYYQITS 444 >gi|307261325|ref|ZP_07543000.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869056|gb|EFN00858.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 464 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + +WW+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQWWKNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRQADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQTLKRYIQGRFNAGQATAYELNEIDGQISAIQAKQATLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKAPQAF--RLQKNRNALIKIPNTPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|257142398|ref|ZP_05590660.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] Length = 508 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 108/445 (24%), Positives = 191/445 (42%), Gaps = 65/445 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 60 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 119 Query: 110 PNLKTNSTGQLDSDW-----KIDLFGQRRHIESSL-ANLDSAYAQVDI-AKLNVISKLIP 162 P S G +++ + + L G+ SSL L+ Q+D+ K ++ + Sbjct: 120 PR----SGGTINTTFNGLPVSVPLVGESVVSSSSLFVGLNY---QLDLWGKNAAATRGLL 172 Query: 163 SYIDARHF---KERISIAHQILDLYKKNIELSH-------LKFTQGATSKLSLVKLEAEI 212 S DA + R++++ I+ LY EL L+ + A+ ++ V E Sbjct: 173 SMRDAARVEAEQARLALSVAIVTLYG---ELDRAYALRELLQQKRRASEQVETVLRERAA 229 Query: 213 KSIE----SDIPTLEKS------------FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 + I+ +D L++ ++ + L G L + + Sbjct: 230 RGIDNGYDADDAALKRGKLLEQLALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LA 286 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTH 313 P P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT Sbjct: 287 PLADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTP 346 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F S GP L LPIFD+G++K+ + ++A + +TV A+ EV L Sbjct: 347 ASLFKHDALGGSIGPALSLPIFDRGRLKAKLGGDVANADVALALYNQTVDAALGEVARQL 406 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG-------RYSLLDILDIERATAKVEV 426 TS++ ++ Q AV ++ ++L+ +R+G + L +LD ERA + Sbjct: 407 TSLSTVDALLEAQQQAVRSAQRMVALAQDRHRRGMGMRKDVNVAKLTLLD-ERAHV---I 462 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R L V L A+G G++ Sbjct: 463 ELQARRRTL---RVGLIGALGGGFD 484 >gi|261491586|ref|ZP_05988169.1| putative RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494946|ref|ZP_05991415.1| putative RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309355|gb|EEY10589.1| putative RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312712|gb|EEY13832.1| putative RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 465 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 76/376 (20%), Positives = 170/376 (45%), Gaps = 26/376 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW+ + D LN++V +A++ NL + ++ +N A N V A+L P+ S S Sbjct: 52 QWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFSGSGSVSAAK 111 Query: 111 NLKTNSTGQLDS-------------DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKL 154 L + S+ + + + +DL+ RR +++ A + A ++ +L Sbjct: 112 GLGSASSNNVSTGVSTTAAQAAFNLSYTVDLW--RRLADTASAAEWTHKATIEDLKATRL 169 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++I+ ++ +Y ++++ I I + + Y++ + K GA L++ + + + + Sbjct: 170 SIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSLAVDQAQQAVLN 229 Query: 215 IESDIPTLEKSFRMNVHNISTLLGY-PATEF-LHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + L+ + ++ + LL P T + Y S Q +++ +P I Sbjct: 230 ARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQ-----GVDLNVPVSAI 284 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLY 331 NRPD+ ++L + + + +P+L++ GSI + N + G KL Sbjct: 285 ANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADNPVGNGLIKLD 344 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP D ++K+N++ +E+ + +++ + +A+ E++ S + + + LQ Sbjct: 345 LPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQSRSSLKILQDTNA 404 Query: 392 LHKKSMSLSMINYRQG 407 +K+ S Y QG Sbjct: 405 KNKRISSYYKNRYEQG 420 >gi|119468715|ref|ZP_01611767.1| putative lipoprotein, possibly associated with the outermembrane [Alteromonadales bacterium TW-7] gi|119447771|gb|EAW29037.1| putative lipoprotein, possibly associated with the outermembrane [Alteromonadales bacterium TW-7] Length = 470 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 82/415 (19%), Positives = 168/415 (40%), Gaps = 14/415 (3%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L + L++GC + + S + L D WW + LN+LV AL Sbjct: 19 LMVTLISGCASKVDVLDEQKTINEFVASAAVADQLSGADETNWWHALKSEQLNQLVSDAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS---TGQLDSDWKI 126 +N + + + +A + +A P + + TNS + +W++ Sbjct: 79 AKNYDLKTSQLVLKSALARLGEQKAQYLPQGGVEVGAQRSGLGDTNSRQSSANFALNWQL 138 Query: 127 DLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ ++++ A+ S QV + ++ V+S ++ ++ + E+ I + + Sbjct: 139 DLFGRVTALVDAANASAMSQAEQVRLLQIEVVSAVVKGFVSYQGNAEKQRIISLQIQALE 198 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT--E 243 ++I++ + +G S+L L + A+++ ++ IP +E + ++ ++ L G E Sbjct: 199 QSIDVLQARVDEGVASELDLNRTLAQLRQQQALIPAIEFAKYSDLSTLAVLTGRLTQNIE 258 Query: 244 FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + M N F + + P I RPDI + + + A L P + Sbjct: 259 LTNEMSVLRNKF------DVTLSKPNAAIALRPDISRAIYDFSQANSLSVAASKALLPDV 312 Query: 304 SLNG--SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 SL+G + N F W PKL I + + + ++ Y +Q Sbjct: 313 SLSGFAGVLSLGSNGFSDTQQQWQIAPKLQWSILSYPALLAQRDAQQFLSEAAYSDYQNV 372 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 VL A+ E E +L + + + + K+ + + +G+ L++LD Sbjct: 373 VLKALSESELSLQGLVNQAQQKSFADERFDFANKAFLQAEAMFEEGQIPYLELLD 427 >gi|312796195|ref|YP_004029117.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312167970|emb|CBW74973.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 391 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 68/331 (20%), Positives = 147/331 (44%), Gaps = 13/331 (3%) Query: 128 LFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+G+ R + S+++ A A+ A+L + + + +Y IA + + Sbjct: 54 LWGKNREALRSAISQEKVAAAEAQQARLTLATSVARAYNQLAQLYALREIAQREISNRAD 113 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 ++ + G +++ E I + ++ + L+ + + LLG L Sbjct: 114 VGAITRGRLAAGLDTEVERRTAEGNIATSKASLTDLDGQITTTRYQLGALLGKGPDRGLR 173 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + ++ +P N+ PADL+ RPDI ++ ++ I +AK++ +P ++L+ Sbjct: 174 IATPRLG-VGGSVALPANL--PADLLSRRPDIVAARWQVEAAMHDIKVAKAEFFPDINLS 230 Query: 307 ---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G A + GP L+LPIFD G +++N++ + + +T++ Sbjct: 231 AGFGFDAFGWGRFLQSGSRQIQAGPALHLPIFDGGTLRANLKSKLADYDSAVANYNQTLI 290 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL---DIERA 420 A+ +V + +I + Q A + K++ L++I Y+ G L +L ++ A Sbjct: 291 GALNDVATQVAAIRSVDQQRVDAQAAYDASKRAYELAVIRYKAGLAPQLQVLSADSLQLA 350 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + V+L++ +R L + L A+G G++ Sbjct: 351 QQQTMVNLTMRRRDL---QLALIKALGGGFD 378 >gi|237751377|ref|ZP_04581857.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372743|gb|EEO23134.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 505 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 89/416 (21%), Positives = 183/416 (43%), Gaps = 30/416 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN---- 111 F+D+ LN+L ALQ+N I I A+ +LFP + A +++ + N Sbjct: 71 FDDSVLNELANHALQKNTNIKTLESNIKQARATAKIHTWNLFPKANAGLNYNYSDNNYKQ 130 Query: 112 LKTNSTGQ-----LDSDWKIDLFGQ--------RRHIESSLANLDSAYAQVDIAKLNVIS 158 ++TN T L W++DLFG+ ++ I S+ NL +A ++ ++ Sbjct: 131 IQTNITQNTTNMSLSFSWEVDLFGKLNALRLSSKQQILHSIYNLQAA-------QVILLG 183 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y R +E I++ QI ++ +L+ K+ G S+ ++ + ++ Sbjct: 184 DIANYYFIIRQTREAITLNKQITQNLEEIYKLTEKKYHLGLVGLDSVATTKSNYLTQKNT 243 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPD 277 +LE + N + + LL F ++N+ IP +P +++ NRPD Sbjct: 244 TLSLEYTLEQNKNALLVLLNANTLNF----DINTDNYTFKTPQIPHVDSMPTNVLFNRPD 299 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFD 336 +R L S+ + K L PS++L+G++ + G + W L P+ + Sbjct: 300 VRASVFALNSSLYQRYNKKMALLPSVNLSGNLGQILFSPQLGIGDMVWQMAGSLAAPLLN 359 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + + + A+ + ++ + + Q T+ A+ E+ENA + ++ + Q +HK + Sbjct: 360 RQALTQDYIIAKENTKQAFYSLQNTLNTALAEIENAAKYVFITQETLKHTQENYNIHKDT 419 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +++ Y++ + L+ E + + L+ A ++ + LY A G + P Sbjct: 420 LNIMESRYQKNLIDSISRLEYENNYLRAKNTLASANLSKNQAVIALYKAFGGDFAP 475 >gi|154148176|ref|YP_001406640.1| outer membrane efflux protein [Campylobacter hominis ATCC BAA-381] gi|153804185|gb|ABS51192.1| outer membrane efflux protein [Campylobacter hominis ATCC BAA-381] Length = 447 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 204/438 (46%), Gaps = 36/438 (8%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 I IV L+ C+ TK + P + + + ++ KW++ +N LN+LV+ Sbjct: 5 IIIFLIVFLSACS-----TKNALNYEPNK-NFKDENETFRLEK-KWYKLYNQNQLNELVE 57 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYAS---ISHRFIP---NLKTNSTGQL 120 L+ N+ A+ + A EN + ADLFP+ A ++R I N + ++ Sbjct: 58 EVLKNNIDFKIASLNLARAYENAGLISADLFPTLSAGADFTTNRDISTNDNFRKKYQAKV 117 Query: 121 DSDWKIDLFGQ---RRHIESSLANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERIS 175 + ++++DL G+ R++ LA D + D+ KL +I+ + Y + E ++ Sbjct: 118 EINYEVDLLGKILSRKYASDWLATAD----EFDLQSLKLTLINSAVSGYFKEIYLNEALN 173 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + Y+K E+ ++K G + L L + E + ++++ +L + N + Sbjct: 174 FTERNIKSYEKLNEIINIKVAYGKSEPLELKQTENALLNLQNKKLSLISQLKNNELFLRN 233 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 LLG +EFL + Q N + ++ +++ P + NRPD+R ++ S ++ Sbjct: 234 LLG-NDSEFLTPVS-QIENIK---FLGVDMSAPYIALSNRPDLRAAISRINVSFYDYRVS 288 Query: 296 KSDLYPSLSLNGSIALTHDNSFP-GYNTHWSFGP-KLYLPIFDKGKIKSNIRRAESSAQE 353 + + +P++SL S++ ++D F + ++ G + LP ++KS +R ++ + Sbjct: 289 QLEFFPNVSLGASLS-SNDEKFKDAFKLNFFSGNVSINLPFLYYSRLKSRLRISQIDFKI 347 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI---NYRQGRYS 410 +++ + A+ EV N L I E + LQ+ + ++ + ++ I Y GR Sbjct: 348 NVKKYEKALSEAVNEVRN-LYEIYEIS--LNNLQNLKKNYENAAKIAEIYNAKYDAGRAE 404 Query: 411 LLDILDIERATAKVEVDL 428 L D L+ + A ++ L Sbjct: 405 LKDYLEADTAAIDAKISL 422 >gi|83717519|ref|YP_440070.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83717604|ref|YP_439277.1| RND efflux system outer membrane lipoprotein [Burkholderia thailandensis E264] gi|83651344|gb|ABC35408.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] gi|83651429|gb|ABC35493.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis E264] Length = 553 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 108/445 (24%), Positives = 191/445 (42%), Gaps = 65/445 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 105 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 164 Query: 110 PNLKTNSTGQLDSDW-----KIDLFGQRRHIESSL-ANLDSAYAQVDI-AKLNVISKLIP 162 P S G +++ + + L G+ SSL L+ Q+D+ K ++ + Sbjct: 165 PR----SGGTINTTFNGLPVSVPLVGESVVSSSSLFVGLNY---QLDLWGKNAAATRGLL 217 Query: 163 SYIDARHF---KERISIAHQILDLYKKNIELSH-------LKFTQGATSKLSLVKLEAEI 212 S DA + R++++ I+ LY EL L+ + A+ ++ V E Sbjct: 218 SMRDAARVEAEQARLALSVAIVTLYG---ELDRAYALRELLQQKRRASEQVETVLRERAA 274 Query: 213 KSIE----SDIPTLEKS------------FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 + I+ +D L++ ++ + L G L + + Sbjct: 275 RGIDNGYDADDAALKRGKLLEQLALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LA 331 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTH 313 P P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT Sbjct: 332 PLADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTP 391 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F S GP L LPIFD+G++K+ + ++A + +TV A+ EV L Sbjct: 392 ASLFKHDALGGSIGPALSLPIFDRGRLKAKLGGDVANADVALALYNQTVDAALGEVARQL 451 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG-------RYSLLDILDIERATAKVEV 426 TS++ ++ Q AV ++ ++L+ +R+G + L +LD ERA + Sbjct: 452 TSLSTVDALLEAQQQAVRSAQRMVALAQDRHRRGMGMRKDVNVAKLTLLD-ERAHV---I 507 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R L V L A+G G++ Sbjct: 508 ELQARRRTL---RVGLIGALGGGFD 529 >gi|167588448|ref|ZP_02380836.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 449 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 92/391 (23%), Positives = 171/391 (43%), Gaps = 45/391 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W D L++LV ALQQN L + QA RI A+ L ++ A++S + Sbjct: 8 WVAQLQDPQLDQLVAEALQQNPDLQVAQARLRIAQAQLQQFDALTGLTGTAGATVSRARM 67 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ S G Q+ D +++DL+G+ + SL +L D+A Sbjct: 68 PQPGDIADVSIGGYKVPVQIFGDPAASPSSVFVALNYQLDLWGRNKAATKSLMSLRDAAR 127 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT--QGATSKLS 204 + D +L + + ++ Y R+ A+ DL ++ +++S T + T++ Sbjct: 128 VEADQVRLAMSTAIVAVYC-------RLDQAYAARDLLQQKLKVSQRVTTVLRERTARGI 180 Query: 205 LVKLEAEIKSIE-----SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 +A SI+ I ++ ++ + L G L + F + Sbjct: 181 DNAYDASDASIKRSRLLGQIALSDEQIKLAQLQLGVLSGRGPERGLALQRPHVGEFG-DA 239 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS---LSLNGSIALTHDNS 316 +P + PADL+ RPDI ++ + A ++ YP ++L G ALT + Sbjct: 240 ALPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLIALGGVFALTPASL 297 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F S GP + LPIFD+G++K+ + + A + +TV +A+ +V +TS+ Sbjct: 298 FSRDALAGSVGPAVSLPIFDRGRLKAKLGADVAQADVAIGLYNKTVDDALGQVAQLVTSL 357 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +V + Q AV +K + ++ +R+G Sbjct: 358 QTSQTLVAQQQDAVAAAQKIVQIATDRHRRG 388 >gi|330819845|ref|YP_004348707.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|330819867|ref|YP_004348729.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|327371840|gb|AEA63195.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] gi|327371862|gb|AEA63217.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia gladioli BSR3] Length = 518 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 23/203 (11%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFP 318 P+ +P DL+ RPDI ++ + + + AK+D YP+++L G ALT Sbjct: 298 PLPARLPVDLLGRRPDIVAARLRVQAAFSAVDGAKADFYPNVNLSAIGGLFALTPAGLLK 357 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 G S GP + LPIFD+G++K+ + ++A + +TV A+ +V LT + Sbjct: 358 GRAFGGSIGPAVTLPIFDRGRLKAKLAGDVANADLSIALYNKTVDEALGQVARQLTQLRT 417 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQG----------RYSLLDILDIERATAKVEVDL 428 ++ + QH+V+ +K + ++ +R+G R +L+D ER +DL Sbjct: 418 VDALLAEQQHSVDAAQKIVDIADERHRRGFGMEKDVNNARLTLVD----ERTQL---IDL 470 Query: 429 SIAKRQLAKSYVDLYIAIGSGYN 451 +R L +D A+G G++ Sbjct: 471 MAERRALRVGLID---ALGGGFD 490 >gi|84387479|ref|ZP_00990498.1| putative outer membrane transport protein [Vibrio splendidus 12B01] gi|84377732|gb|EAP94596.1| putative outer membrane transport protein [Vibrio splendidus 12B01] Length = 455 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 183/414 (44%), Gaps = 41/414 (9%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF--PSSYASI--SHRFIPN 111 FN+ +L +LVK AL N + + R+ A+ +L+ ++D + P+ A S + Sbjct: 62 FNNQALAELVKEALSNNHDLHKTALRLQQAE--LLAKQSDQYLQPTLSAGFQASRQKTNQ 119 Query: 112 LKTNSTGQLDSDWKIDLFGQ------RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 ++ N LD W+ D++G+ + + LD YAQ +A +++I +++ Sbjct: 120 IENNHKLSLDLSWEFDVWGRLADAASAANAKQQATQLDYVYAQNSLA-----ARVIEAWL 174 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D + I + + L + + G + L A + + + E+ Sbjct: 175 DIAYRARVIGVEQRWLQSLSNTENIVLEQVLDGFKEQADLDTARAATSRVRASLAAKEQD 234 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDI--RYQE 282 + + ++TL G T + F P + P + +P ++I +RPD+ YQ+ Sbjct: 235 QLIAIRGLNTLRGKSDTRLNQMI------FTIPEVEAP-PLRLPGEMIGSRPDLLAAYQQ 287 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 AD A +A DL P +L+ S+ + + N + W+ + P+ D+ + Sbjct: 288 VLAADKSA--AVAYKDLLPKFTLSASVYRSGSTPNQLIDNPSLWNLVGGISAPLLDQSSL 345 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH-----AVELHKK 395 ++ + A+ A+E ++ +Q+ +L AI EV NAL DK+ K Q A K Sbjct: 346 QTQAKIAQLQAEESFVDYQKKLLVAINEVGNAL-----DKEFYLKQQEQHYRDAFTFSKA 400 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 SM Y++G +L +L +++ + ++ L +R + + L +A+G G Sbjct: 401 SMKNYQNLYQEGASDVLALLIAQQSIYQSKIQLLNTQRTRLSNRITLGLALGMG 454 >gi|167621138|ref|ZP_02389769.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 483 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 108/445 (24%), Positives = 191/445 (42%), Gaps = 65/445 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 35 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 94 Query: 110 PNLKTNSTGQLDSDW-----KIDLFGQRRHIESSL-ANLDSAYAQVDI-AKLNVISKLIP 162 P S G +++ + + L G+ SSL L+ Q+D+ K ++ + Sbjct: 95 PR----SGGTINTTFNGLPVSVPLVGESVVSSSSLFVGLNY---QLDLWGKNAAATRGLL 147 Query: 163 SYIDARHF---KERISIAHQILDLYKKNIELSH-------LKFTQGATSKLSLVKLEAEI 212 S DA + R++++ I+ LY EL L+ + A+ ++ V E Sbjct: 148 SMRDAARVEAEQARLALSVAIVTLYG---ELDRAYALRELLQQKRRASEQVETVLRERAA 204 Query: 213 KSIE----SDIPTLEKS------------FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 + I+ +D L++ ++ + L G L + + Sbjct: 205 RGIDNGYDADDAALKRGKLLEQLALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LA 261 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTH 313 P P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT Sbjct: 262 PLADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTP 321 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F S GP L LPIFD+G++K+ + ++A + +TV A+ EV L Sbjct: 322 ASLFKHDALGGSIGPALSLPIFDRGRLKAKLGGDVANADVALALYNQTVDAALGEVARQL 381 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG-------RYSLLDILDIERATAKVEV 426 TS++ ++ Q AV ++ ++L+ +R+G + L +LD ERA + Sbjct: 382 TSLSTVDALLEAQQQAVRSAQRMVALAQDRHRRGMGMRKDVNVAKLTLLD-ERAHV---I 437 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 +L +R L V L A+G G++ Sbjct: 438 ELQARRRTL---RVGLIGALGGGFD 459 >gi|240949428|ref|ZP_04753769.1| probable outer membrane protein [Actinobacillus minor NM305] gi|240296177|gb|EER46833.1| probable outer membrane protein [Actinobacillus minor NM305] Length = 464 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 76/385 (19%), Positives = 163/385 (42%), Gaps = 45/385 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW +ND LN LV A+Q NL + ++ +N A N V A+L P+ Sbjct: 52 QWWRGYNDAQLNALVDQAIQNNLDLAKSAIAVNKALYNANLVGANLVPTFSGSGSTSASK 111 Query: 100 SYASISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNV 156 S S+ + T ++T + + IDL+ +R +S A + D+ +L++ Sbjct: 112 GVGSTSNNVSTGVSTISNTASFNLSYTIDLW-KRLADTASAAEWEHKATIEDLKSTRLSL 170 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ ++ +Y ++++ I++ + + Y++ + K GA L++ + + + Sbjct: 171 INSVVATYYQIAYYRDAIAVTEKTIKNYEEISRILRNKLAAGAIDSLAVEQAQQSTLNAR 230 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-------------I 263 + + L + + LL N +PN I + Sbjct: 231 NSVVALRANLNTAEKTMRNLL----------------NLKPNQPIATRYPSILSVKLQGV 274 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNT 322 + +P I NRPD+ + ++L + + + +P+L+L S++ + + G N Sbjct: 275 DTNVPVSAIANRPDVTARLQRLQSAFKTLTATEKSWFPTLTLGASLSSSATKAANIGDNP 334 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 S LP D ++++ ++ +E+ + +++T+ +A+ E++N + + + Sbjct: 335 VGSGVFSFDLPFLDWNRVQNTVKISETDYMTARMNYEQTITSALNEIDNYYYAYKQSRSS 394 Query: 383 VTKLQHAVELHKKSMSLSMINYRQG 407 + LQ E KK + Y QG Sbjct: 395 LGLLQQTYEKDKKISAYYKNRYNQG 419 >gi|167619881|ref|ZP_02388512.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis Bt4] Length = 292 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 7/185 (3%) Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 GA S+ ++ + ++E+ +P L + ++ H ++ LLG T + Q Sbjct: 5 GAASRTDMLNAQQSAAALEASLPALRQQWQTTRHALAVLLGR--TPDAAPADLALADVQL 62 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-- 315 +P+ + P+ L++ RPDIR E L + +++G+A + ++P LSL+ S+ N Sbjct: 63 PQDVPVVV--PSTLLQARPDIRAAEAGLQAAASEVGVATAQMFPQLSLSASMGHAGFNWP 120 Query: 316 -SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 G WS G L P+F G + + R A ++ +++TVL A ++V + L Sbjct: 121 AMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARATYDAAVDQYRQTVLAAFQDVADKLA 180 Query: 375 SINED 379 +++ D Sbjct: 181 ALDND 185 >gi|254361802|ref|ZP_04977937.1| possible RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica PHL213] gi|153093337|gb|EDN74333.1| possible RND superfamily resistance-nodulation-cell division antiporter [Mannheimia haemolytica PHL213] Length = 465 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 76/376 (20%), Positives = 170/376 (45%), Gaps = 26/376 (6%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW+ + D LN++V +A++ NL + ++ +N A N V A+L P+ S S Sbjct: 52 QWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFSGSGSVSAAK 111 Query: 111 NLKTNSTGQLDS-------------DWKIDLFGQRRHIESSLANLDSAYAQVD---IAKL 154 L + S+ + + + +DL+ RR +++ A + A ++ +L Sbjct: 112 GLGSASSNNVSTGVSTTAAQAAFNLSYTVDLW--RRLADTASAAEWTHKATIEDLKATRL 169 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++I+ ++ +Y ++++ I I + + Y++ + K GA L++ + + + + Sbjct: 170 SIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSLAVDQAQQAVLN 229 Query: 215 IESDIPTLEKSFRMNVHNISTLLGY-PATEF-LHYMQKQSNNFQPNLYIPINIGIPADLI 272 + + L+ + ++ + LL P T + Y S Q +++ +P I Sbjct: 230 ARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQ-----GVDLNVPVSAI 284 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLY 331 NRPD+ ++L + + + +P+L++ GSI + N + G KL Sbjct: 285 ANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADNPVGNGLIKLD 344 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP D ++K+N++ +E+ + +++ + +A+ E++ S + + + LQ Sbjct: 345 LPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQSRSSLKILQDTNA 404 Query: 392 LHKKSMSLSMINYRQG 407 +K+ S Y QG Sbjct: 405 KNKRISSYYKNRYEQG 420 >gi|57242013|ref|ZP_00369953.1| outer membrane efflux family protein, putative [Campylobacter upsaliensis RM3195] gi|57017205|gb|EAL53986.1| outer membrane efflux family protein, putative [Campylobacter upsaliensis RM3195] Length = 452 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 93/417 (22%), Positives = 188/417 (45%), Gaps = 33/417 (7%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW+++ D +L + + L+ N I A + +A + DL+PS ++ + Sbjct: 42 QWWQAYEDANLQEFLAFVLENNKDIKVARTSLLSALARADLIDYDLYPSLDGTLGFNRMK 101 Query: 111 NL--KTNSTG---QLDSDWKIDLFGQRRHIESSLANLDSAYAQ--------VDIA--KLN 155 NL TN+ G L+ ++++D++G+ LDS A+ D+A KL+ Sbjct: 102 NLHKGTNNKGYSNGLNLNYELDIYGKI---------LDSVKAEELRVKASAYDLASLKLS 152 Query: 156 VISKLIPSYIDARHFKE-RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +++ + S + +F + +I + + + +L K + EL LK+ G +L + +E + Sbjct: 153 IVNASLNSVFELAYFNDVKIMLENYVSNLEKMS-ELYALKYELGKIEELDFLNVEQSLLK 211 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQS-NNFQPNLYIPINIGIPADLI 272 ++ T E++ + + N+ L+G F L Y +K S +F+ L P + IP + Sbjct: 212 ARQNLLTNEQNRNLILKNLQDLIGKKEGFFYLKYFEKASLEDFK--LLKP-DFNIPLQSL 268 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLY 331 RPD+R + L + + + PS+SL G++ + + G ++ Sbjct: 269 AYRPDVRAKLNALKAAFKDYNRVQKSILPSISLGGALRGEAEEFKESFKLEILSGNIQIS 328 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LP D G+++ NI+ ++ + + +++ + A E D K+++ L + Sbjct: 329 LPFLDYGRVRQNIKISQFAYEALLFEYEQKLQGAFNEFHLVFKDYESDLKLLSNLSLIKD 388 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + Y G+ L D LD A + +L AK L ++ ++LY I S Sbjct: 389 KQEFITRAYLQKYELGKSELKDYLDASNALISSQQELLRAKYNLLET-INLYYQITS 444 >gi|218781252|ref|YP_002432570.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] gi|218762636|gb|ACL05102.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] Length = 458 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/307 (23%), Positives = 152/307 (49%), Gaps = 12/307 (3%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + S + ++ +A+ +E I+IA D ++ +E + +++ GA S ++ E + Sbjct: 156 RRQLFSAVAGAFHNAQSAREDIAIARADQDFNQRLMEEAKVRYDVGAGSLSDVLNFEIAV 215 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEF-----LHYMQKQSNNFQPNLYIPINIGI 267 +S ++ + ++S+++ + ++ LLG EF L ++K++ + +L P++ Sbjct: 216 RSAQTQLINSQRSYQVAMIGLAALLGLDDQEFVSKTCLAQLEKETPH---DLTPPLSAEY 272 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTHWS 325 +NRPDI E +A + A +G AK YP+L L+ + +D F + S Sbjct: 273 TDLAKKNRPDILQAEAAVAQAKASVGAAKGAFYPTLRLSAYSEASRANDAGFEEEDVENS 332 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L +F G K+ + A ++ +E + + L+ I++V A+ S+ ++ V Sbjct: 333 VAASLSYNLFAGGLNKAQLAEARAAEREAKASLVQKELSVIQDVNEAVASVKAAQEQVKL 392 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + L +++ L Y+ G+ SL+ + + +R +V +LS A+ L +++ DLY+A Sbjct: 393 QEETAGLVQRNRDLVQEEYKAGQTSLVRLNEAQRDLIQVRSNLSRARVYLRQAWHDLYMA 452 Query: 446 IGSGYNP 452 + Y P Sbjct: 453 --AAYMP 457 >gi|325852972|ref|ZP_08171185.1| outer membrane efflux protein [Prevotella denticola CRIS 18C-A] gi|325484514|gb|EGC87433.1| outer membrane efflux protein [Prevotella denticola CRIS 18C-A] Length = 363 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 46/293 (15%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 W + F D +L L+ AL N + + + AK NIL+ R + PS A++S Sbjct: 57 WRDFFKDPTLCALIDTALANNQDLKITLQEMAIAKSNILAKRGQMLPSVTANVSAGASKA 116 Query: 106 HRF-----------------IPNLKTNSTGQLDSDWKIDLFGQ-----RRHIESSLANLD 143 R+ +PN+ + L DW +DL+ Q R +E LA Sbjct: 117 GRYTAEGAGNVGTEITPGHNVPNVVPDFAPNLHLDWSVDLWNQLNSTKRAAVERYLA--- 173 Query: 144 SAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 S Q I K +++ + +Y ++ I Q + L KK ++++ ++ A ++L Sbjct: 174 SEEGQRTI-KSQLVADVAENYYALLALDNKLDIMQQYIALQKKAVQIARVQKEADADTQL 232 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG---YPATEFLHYMQKQS--NNFQPN 258 ++ K E+E+ ++ L ++ +N++ LLG P T + + +QS N Q Sbjct: 233 AVEKFESELAKASAEEYQLRQAITETENNLNLLLGRYPTPITRNKNVLMEQSLPNTLQ-- 290 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 IPA L+ +RPDI E +L + + A+ PSL+++ S+ L Sbjct: 291 -------AIPASLLLHRPDIVAAEHQLRAAKWDVEAARKAFLPSLNISASLGL 336 >gi|109899900|ref|YP_663155.1| RND efflux system outer membrane lipoprotein [Pseudoalteromonas atlantica T6c] gi|109702181|gb|ABG42101.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas atlantica T6c] Length = 452 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 101/453 (22%), Positives = 198/453 (43%), Gaps = 39/453 (8%) Query: 15 LAGCTVGPEY-TKPHMPLLPT----QFSIGNSK------NLINIDTLK---WWESFNDTS 60 LA C+ P Y K LL Q++ N++ +L++ID LK N+ S Sbjct: 18 LAACSSQPSYKAKDTEQLLKQHEQWQYTQQNAQQVTYLTDLVSIDELKPIIAQALANNPS 77 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 N++ ++AL+ L +R A +V AD ++ + T + L Sbjct: 78 YNQM-RVALK-----LAYAQRQVTAANQWFNVNAD--------VNAQRSEEEGTQYSSSL 123 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARHFKERISIAH 178 W+ D++ Q+ S ++ A Q D A+ +++ +I +Y++ ++ + I Sbjct: 124 GVSWEADVW-QKNADSVSAQDMTIASTQADYQGARDTLVASVIRTYLNIILRQDLLDIEQ 182 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q L + + N + ++ G +L S + I + + I LLG Sbjct: 183 QRLVMLENNEQSIIERYQLGLGDLEALDTARTSTASTRATIADYVEQIAQSKRAIEVLLG 242 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + L N QP +P+ DL R RPD++ ++ + ++ Sbjct: 243 VDTLDDLFVSSTMPNVLQPLANLPVQ-----DLSR-RPDLQSAFYQIEAKRYLVDVSYKA 296 Query: 299 LYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 L PS++L+ S++ + + W+ L P+F G +++ I A+ +A++ + Sbjct: 297 LLPSITLSASLSDLANTPSEALLKSPLWTLLGNLSAPLFQGGALRAQIDIAKLNAEQAFW 356 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +Q+T+L A+ EVENAL K ++ A++ ++S S Y+QG +L++L Sbjct: 357 NYQDTLLTAVNEVENALGQEQSLKTQQAQINSALQSAQRSFSNYQSKYQQGLVDILELLT 416 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +++ ++V L+ L + +DL +A+G G Sbjct: 417 VQQTVYDLQVQLAQLNYTLQTNRIDLGLALGLG 449 >gi|167583031|ref|ZP_02375905.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis TXDOH] Length = 476 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 108/448 (24%), Positives = 191/448 (42%), Gaps = 71/448 (15%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 28 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 87 Query: 110 PNLKTNSTGQLDSDW-----KIDLFGQRRHIESSL-ANLDSAYAQVDI-AKLNVISKLIP 162 P S G +++ + + L G+ SSL L+ Q+D+ K ++ + Sbjct: 88 PR----SGGTINTTFNGLPVSVPLVGESVVSSSSLFVGLNY---QLDLWGKNAAATRGLL 140 Query: 163 SYIDARHF---KERISIAHQILDLYKKNIELSH-------LKFTQGATSKLSLVKLEAEI 212 S DA + R++++ I+ LY EL L+ + A+ ++ V E Sbjct: 141 SMRDAARVEAEQARLALSVAIVTLYG---ELDRAYALRELLQQKRRASEQVETVLRERAA 197 Query: 213 KSIE----SDIPTLEKS------------FRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 + I+ +D L++ ++ + L G L + + Sbjct: 198 RGIDNGYDADDAALKRGKLLEQLALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LA 254 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTH 313 P P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT Sbjct: 255 PLADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTP 314 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F S GP L LPIFD+G++K+ + ++A + +TV A+ EV L Sbjct: 315 ASLFKHDALGGSIGPALSLPIFDRGRLKAKLGGDVANADVALALYNQTVDAALGEVARQL 374 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG----------RYSLLDILDIERATAK 423 TS++ ++ Q AV ++ ++L+ +R+G + +LLD ERA Sbjct: 375 TSLSTVDALLEAQQQAVRSAQRMVALAEDRHRRGMGMRKDVNVAKLTLLD----ERAHV- 429 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++L +R L V L A+G G++ Sbjct: 430 --IELQARRRTL---RVGLIGALGGGFD 452 >gi|68250009|ref|YP_249121.1| hypothetical protein NTHI1668 [Haemophilus influenzae 86-028NP] gi|148826003|ref|YP_001290756.1| hypothetical protein CGSHiEE_04900 [Haemophilus influenzae PittEE] gi|229846683|ref|ZP_04466790.1| hypothetical protein CGSHi7P49H1_01628 [Haemophilus influenzae 7P49H1] gi|68058208|gb|AAX88461.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP] gi|148716163|gb|ABQ98373.1| hypothetical protein CGSHiEE_04900 [Haemophilus influenzae PittEE] gi|229810172|gb|EEP45891.1| hypothetical protein CGSHi7P49H1_01628 [Haemophilus influenzae 7P49H1] Length = 454 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/413 (18%), Positives = 178/413 (43%), Gaps = 23/413 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 I---PNLKTNSTGQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + N T+ G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ + Sbjct: 110 VDISTNSATSHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVTT 168 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + + IS ++ + Y + + QG S+ + + I + ++ E Sbjct: 169 YYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNFE 228 Query: 224 KSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + LL E F H M ++ +N+ +P +I NRPD+ Sbjct: 229 TQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPDV 280 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDK 337 + + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 281 KAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLNW 340 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 341 NTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRIT 400 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 401 QYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|255065312|ref|ZP_05317167.1| outer membrane efflux family protein [Neisseria sicca ATCC 29256] gi|255050733|gb|EET46197.1| outer membrane efflux family protein [Neisseria sicca ATCC 29256] Length = 195 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNT 322 P L+ RPD+R Q ++ AK AK+DL P ++ G I + D S G+ + Sbjct: 8 PQGLLERRPDLRAQAAQVNAYAAKFASAKADLLPRFTISFMGQGGRIGVDGDRSLTGWAS 67 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 S G + P+F G+IK+NI+ A++ Q + + + +L A+ EV++A + + Sbjct: 68 LLSVG--IQTPLFTNGRIKANIKAADARLQTALLEYDKRLLTALGEVDSAYQGVESLSRQ 125 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDI-LDIERATAKVEVDLSIAKRQLAKSYVD 441 LQ A + + + +R G Y LD+ L +++ +L A+ A+ V Sbjct: 126 TELLQTAHNQAARHAADTEKMFRNG-YKTLDVALKAHITEGQMQENLIAARLARAQMLVS 184 Query: 442 LYIAIGSGYN 451 LY A+G G++ Sbjct: 185 LYKALGGGWS 194 >gi|288549861|ref|ZP_05968431.2| multidrug resistance outer membrane protein MdtQ [Enterobacter cancerogenus ATCC 35316] gi|288316982|gb|EFC55920.1| multidrug resistance outer membrane protein MdtQ [Enterobacter cancerogenus ATCC 35316] Length = 472 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 104/492 (21%), Positives = 198/492 (40%), Gaps = 87/492 (17%) Query: 11 FIVLLAGCTVGPEY-TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 I+ L C P++ T + P ++ + I+ +WW+ FND LN+L+ AL Sbjct: 13 LILFLTAC--APQHPTVTGITAQPVASTVNAHLSRIDWPKSEWWKDFNDPQLNELIAKAL 70 Query: 70 Q---------QNLTILQATERINAAKENI------------LSVRADLFPSSYASISHRF 108 Q Q +T+ +A + A + +S + P + + Sbjct: 71 QDAPDMQIARQRITLAEAQAKATMAADGPQIDFSADAERQKMSAEGLMGPFALTDPAAGT 130 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSY--- 164 TN T L + W +DL+G+ R +ES + +++ A+++ + + S + Y Sbjct: 131 TGPWYTNGTFGLTAGWDLDLWGKNRAQVESRIGRVNAQKAELEQTRQLLASSVARLYWAW 190 Query: 165 --------IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + R +E+ +I ++LY+ I S +G + ++ K + I + Sbjct: 191 QTQSAVAGVLTRIKQEQENIIGADVELYQHGITSS----VEGIETDINASKTDERIADVN 246 Query: 217 SDIPTLEKSFRMNVHNISTLL---GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + T+E H S L PA E +P +G +L+ Sbjct: 247 GKMRTIEARLEALTHTTSLKLTPHALPAVE---------------ASLPTTLGY--ELLA 289 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKL 330 RPD++ + S++++ AK+ YP +++ + AL + F L Sbjct: 290 RRPDLQEARWYIEASMSEVDAAKAAFYPDVNVMAFLQQDALHLSDLFRSSAQQMGVTAGL 349 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD G++ +++ A++ + + V+ A+ +V + +E + + K QH Sbjct: 350 TLPIFDSGRLNASLDIAQAQNNLSVANYNKAVVEAVNQVAR---TASEVETLTAKNQHQQ 406 Query: 391 ELHKKS---MSLSMINYRQG-----RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD- 441 ++ K++ +SL+ +R G R S I ++ IA L YVD Sbjct: 407 KVEKEAARVVSLAQARFRAGIVAGSRVSEASIPALKE---------RIAGLTLQGEYVDA 457 Query: 442 ---LYIAIGSGY 450 L A+G GY Sbjct: 458 TLQLTSALGGGY 469 >gi|332529691|ref|ZP_08405645.1| putative outer membrane efflux protein [Hylemonella gracilis ATCC 19624] gi|332040712|gb|EGI77084.1| putative outer membrane efflux protein [Hylemonella gracilis ATCC 19624] Length = 492 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/419 (22%), Positives = 192/419 (45%), Gaps = 21/419 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASI 104 WW +F +L +L+ A + + A ERI A+ + A +PS S + Sbjct: 69 WWTAFQSPALERLITEAQGDSAELRIAYERIRQAEITLRQSGASRWPSVNASAGASRSRS 128 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 S + + ++ + + +++DL+G+ + + A+L ++ A+L++++ + Sbjct: 129 STAGVETTRESTNLGVSASYEVDLWGRVADSVRAGNASLRASQHDWQAARLSLLAGVAGQ 188 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y ER+++A L ++ + + + G + L + + + + S + L+ Sbjct: 189 YFQWLGLSERVALAQANLARTERLLTIVESRLRNGVATPLEVSQQRSTLLSQRVSLLALQ 248 Query: 224 KSFRMNVHNISTLLGYPATEFL--HYMQKQ-------SNNFQPNLYIP-INIGIPADLIR 273 + + ++ LLG F Y+ SN+F L +P + G+PA L+ Sbjct: 249 QQRSQSATALALLLGRQPIGFSPEAYLSASGDATAVASNDF-AALRVPELAPGLPAALLT 307 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLY 331 RPD+ E +LA + A + A++ L P+ SL+ S +T + S S G L Sbjct: 308 RRPDLAAAEAQLAAADANVDAARAALLPTASLSASSTMTSASLFSLADPTRGISLGLSLA 367 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD G+ ++ ++ +ES + + V A+KEV +AL ++ + V Sbjct: 368 QSLFDGGRQRAQVQLSESQRLVLIENYGQAVRTAVKEVGDALGQAGYSQQQEDLQRELVA 427 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + S+ L+ + YR+G L+ +LD +R+ + +LS+ + ++ +DLY A+G + Sbjct: 428 QAQASLRLAELRYREGSGDLMSLLDAQRSLFSAQDNLSVQRLARLQAVLDLYKALGGDW 486 >gi|260583080|ref|ZP_05850862.1| outer membrane protein [Haemophilus influenzae NT127] gi|260093931|gb|EEW77837.1| outer membrane protein [Haemophilus influenzae NT127] Length = 454 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/415 (19%), Positives = 182/415 (43%), Gaps = 27/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG +S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAVSVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 E + + LL E F H M N+ I +N+ +P +I NRP Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIM---------NVKIAGVNLNVPVSVIANRP 278 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIF 335 D++ + +L+ + + +P ++L S++ T + + G + LP Sbjct: 279 DVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFL 338 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 339 NWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQR 398 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 399 ITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|15602392|ref|NP_245464.1| hypothetical protein PM0527 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720790|gb|AAK02611.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 455 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 85/412 (20%), Positives = 175/412 (42%), Gaps = 21/412 (5%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAA--KENILSVRADLFPSSYASISHRFI 109 WW ++DT LN L+ L N + +A +N A + N+L A+L P+ + Sbjct: 49 WWALYHDTQLNALITQGLDNNKNLAKAAINVNKALYQANLLG--ANLVPAFSGRVESSAT 106 Query: 110 PNL------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQ-VDIAKLNVISK 159 N+ K +G ++ + +DL+ RR +++ A + AY AQ ++ A+L++I+ Sbjct: 107 RNIEHSQPSKIQHSGSINVSYTLDLW--RRLADAASAG-EWAYKASAQDLEAARLSLINS 163 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 LI +Y + + + Y + + +F G S + + + + + Sbjct: 164 LIATYYQIAFLNDALQATEGTIKYYTQINTIMQNRFKLGVADSASSDQTQQAVLRARNQL 223 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 T + ++ + LL E L+ N + + +N +P I NRPDI+ Sbjct: 224 ITYQTQRKVAEQTLRNLLNLKPNEALNIKFPSILNVKT---LGVNTNVPVSTIANRPDIK 280 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLYLPIFDKG 338 + +L+ + + +P+++L S+A +T + G + LP Sbjct: 281 SAQYRLSSAFKDAKAVQKSWFPTITLGASLASAGAKVDTALDTPMASGLVSINLPFLSWN 340 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 +K N++ +E++ + +++++T+ A+ E++ S + + + LQ A +K+ Sbjct: 341 TVKWNVKISEANYELAKVSYEQTITTALNEIDTHYFSYQQSQANLANLQKADAYNKRITQ 400 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L D L ++ + AK QL + +Y A+ Y Sbjct: 401 YYKNRYDAGVSPLRDWLSAANTENDAKLAILNAKYQLIQQENTIYSAMAGYY 452 >gi|317487000|ref|ZP_07945808.1| outer membrane efflux protein [Bilophila wadsworthia 3_1_6] gi|316921682|gb|EFV42960.1| outer membrane efflux protein [Bilophila wadsworthia 3_1_6] Length = 478 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 82/423 (19%), Positives = 185/423 (43%), Gaps = 31/423 (7%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 MN +R +L ++ L GC P LLP + + S +L WW+ ++D Sbjct: 1 MNAIRLFAALLVLGLGGCANYP-MGSLKTDLLPAE-DVAASYSL----NTAWWKGYHDAD 54 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG-- 118 L+++V +AL++N+ + + ++N A + ADL PS A+ S N+ + Sbjct: 55 LDRIVALALERNVDLALSAIKVNRALYQARLLSADLVPSFSANASAAASHNIDNGNAARS 114 Query: 119 ---QLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + +++DL+ + R+ ++ + + A+L +++ + +Y + ++ E I Sbjct: 115 YQTEFGVSYEVDLWQKLRNAANAQEWEYKATMEDREAARLALVNSVADTYFELKYLDESI 174 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + Y++ + L K+ G + + ++ + + S + + L+ + + Sbjct: 175 KVMDASVKRYQELLRLIEAKYEFGKVASVEPLQAQQSLLSARNSLLDLQDRQNVARQTLR 234 Query: 235 TLLGY-----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 LL PA M + + +++ +P + RPDIR E +L + Sbjct: 235 DLLNIRPGENPAIGNADLMSYPT--------VGVDLDVPVAALSARPDIRASEARLQSAF 286 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFDKGKIKSNIRRAE 348 + ++ YP++S+ ++ + S ++ G ++ P I+ NI+ +E Sbjct: 287 KTLESDRASWYPTISIGSTLGTSSSTSSKVFDLPLLAGTVRVSFPFLQWNTIRWNIKISE 346 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + + + + V +A+ EV+ A S ++ L++ + H+K + + Y Q R Sbjct: 347 ADFESAKLDFTQAVTSALNEVDTAYFSYANAQR---SLENTLSKHQKDVRIG--EYYQTR 401 Query: 409 YSL 411 Y L Sbjct: 402 YDL 404 >gi|145630768|ref|ZP_01786546.1| hypothetical protein CGSHi22421_10227 [Haemophilus influenzae R3021] gi|145641627|ref|ZP_01797204.1| hypothetical protein CGSHiR3021_01712 [Haemophilus influenzae R3021] gi|144983650|gb|EDJ91110.1| hypothetical protein CGSHi22421_10227 [Haemophilus influenzae R3021] gi|145273674|gb|EDK13543.1| hypothetical protein CGSHiR3021_01712 [Haemophilus influenzae 22.4-21] Length = 454 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/414 (18%), Positives = 180/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|254250736|ref|ZP_04944055.1| Outer membrane efflux protein [Burkholderia cenocepacia PC184] gi|124879870|gb|EAY67226.1| Outer membrane efflux protein [Burkholderia cenocepacia PC184] Length = 234 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 259 LYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 ++P I G+P+ L+ RPDI E+++A + A+IG A++ +P L L+ S L ++SF Sbjct: 4 FHVPAIPAGVPSQLLERRPDIAAAERRVAAANAQIGEARAAFFPDLVLSASAGL--ESSF 61 Query: 318 -----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 + WS GP+L +FD G+ +++R A + +++TVL A ++VE+ Sbjct: 62 FAPWLAAPSLFWSLGPQLASTLFDGGRRSASLRGAHAQYDGAVADYRQTVLVAFQQVEDQ 121 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE--RATAKVEVDLSI 430 L++I+ Q A + S+ L+ + G S LD++ + T + D Sbjct: 122 LSAIDALASEAGSQQRATDAADLSLRLTTNRFNAGAVSYLDVVTAQTIALTNRRTADQID 181 Query: 431 AKRQLAKSYVDLYIAIGSGYN 451 A+R ++ V L A+G G+ Sbjct: 182 ARR--VEAEVGLLKALGGGWQ 200 >gi|238759741|ref|ZP_04620900.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia aldovae ATCC 35236] gi|238702067|gb|EEP94625.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia aldovae ATCC 35236] Length = 456 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 186/440 (42%), Gaps = 58/440 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA------DLFPSS-YAS 103 +WW D L+ L+ +LQ + ++ QA R+ A+ + A DL+ SS Sbjct: 22 QWWRVLEDAQLDALMTQSLQTSPSLKQAAARVREAQSVMGQADAANGPNLDLYGSSTREK 81 Query: 104 ISHRFI----------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 +S + P +T++ L+ ++ D +G+ R + ++ A +++A A+ A Sbjct: 82 VSQNTLQPFLQAYPNKPLYETSNQLGLNLSYEFDWWGKYRNRVNAANAQVNAARAEQQQA 141 Query: 153 KLNVISKLIPSYIDARH-------FKERISIAHQILDLYKK-------NIELSHLKFTQG 198 L + S + Y + ++ + ++ DL K IE+ Q Sbjct: 142 ALTLTSSVASVYYQLQSNFALQNVLQQEVDNNQRLADLRTKQYQAGIYGIEIPQQTQAQA 201 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 T+K +++L+++ + ++ + L N+ + P E K Sbjct: 202 DTAKQQIIQLQSQGEQLKHQLAALTGQGPSGTQNLRPI---PLPEITRLAPKGE------ 252 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 + DL+ RPDI Q + + ++ A+ + YPSLS++G L+ N F Sbjct: 253 --------LTTDLLGKRPDITAQRQLVESYDQRVKAARKEFYPSLSISGFAGLSTTN-FQ 303 Query: 319 GYNTH--------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 G N + W+F P + LPIF G ++S + + E ++ +T+LNA++E Sbjct: 304 GTNPNLLEAASQAWNFAPAISLPIFHAGALRSQLGEESALYDEAVESYNQTILNAVRETA 363 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 +A+T + + + A + +K +++ Y+ G ++L E + + Sbjct: 364 DAITIQESSQLQLQQAASASQSMQKVYNVADARYKAGIIGRDELLVSESQYLQQQQSELT 423 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A L ++ + L ++G GY Sbjct: 424 ASSNLLQAKIGLIRSLGGGY 443 >gi|288576126|ref|ZP_05978236.2| putative outer membrane multidrug resistance lipoprotein [Neisseria mucosa ATCC 25996] gi|288566293|gb|EFC87853.1| putative outer membrane multidrug resistance lipoprotein [Neisseria mucosa ATCC 25996] Length = 496 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 97/415 (23%), Positives = 169/415 (40%), Gaps = 59/415 (14%) Query: 13 VLLAGCTVGPEYTKPHMPLL-PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71 +LL+ C ++ K PL PT + + ++ + WW ND LN+LV ++++ Sbjct: 30 ILLSACA---QFGK-QAPLEEPTNYGLSEGRSAAIVQD-AWWMQLNDQKLNQLVALSIRN 84 Query: 72 NLTILQATERINAAKENI------------LSVR------ADLFPSSYASISHRFIPNLK 113 + A R A+ + LS R A PS + H L Sbjct: 85 APDLRIAKARFEQAQAQLGITEAASKMQIGLSARGAGAYVAPKPPSGHIDTDHTL---LL 141 Query: 114 TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY-------I 165 N+ L W D +G+ R+ S L + + ++++ + + Y I Sbjct: 142 ANTA--LQGTWSFDFWGKNRKQAASILGKRKAILYEAHQTRIDIANAVASQYFTWQMLLI 199 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ERI ++ L ++ I S SL +E + +S++ + LE+ Sbjct: 200 QQNLLSERIETVDKMQQLMRRRINAR-------LASAESLYPVEMQQQSMQLEKLELERR 252 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 H ++ L G YM ++ +P+N I ADL+ RPDI Q+ L Sbjct: 253 IAKVRHALAILSGTTPDGLSLYMPEKMAAVP---VVPVN-KIHADLLGARPDIAAQKAML 308 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS--FG--PKLYLPIFDKGKIK 341 + +++ YP++ L L H ++F S G P L LPIF G ++ Sbjct: 309 ESRFNTVKATEAEFYPNIELKVLAGLAHIDAFNVVRGRTSGMIGVLPALNLPIFTSGALQ 368 Query: 342 SNI--RRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVE 391 S + RRAE + EQ + TVLNA++ +A+ ++ + + + K+Q E Sbjct: 369 SKLAGRRAEYN--EQVALYDRTVLNAMRAAADAVVDYQNMQKRQSVWEKMQETAE 421 >gi|145638922|ref|ZP_01794530.1| hypothetical protein CGSHiII_02010 [Haemophilus influenzae PittII] gi|145271894|gb|EDK11803.1| hypothetical protein CGSHiII_02010 [Haemophilus influenzae PittII] gi|309750893|gb|ADO80877.1| Outer membrane efflux porin TdeA [Haemophilus influenzae R2866] Length = 454 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/414 (18%), Positives = 180/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V+ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVEQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|90022094|ref|YP_527921.1| hypothetical protein Sde_2449 [Saccharophagus degradans 2-40] gi|89951694|gb|ABD81709.1| outer membrane efflux protein [Saccharophagus degradans 2-40] Length = 477 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/398 (20%), Positives = 175/398 (43%), Gaps = 31/398 (7%) Query: 7 IFSLFIVLLAGCTVGPEYTKPH-MPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 + + FI ++GC P+ +P LP ++++ +S +L + + W D+ L + Sbjct: 7 VITAFIGAISGCARAPKQMAAEPLPFELPPEWAVASS-SLTRVQS-GWASQLADSQLEQY 64 Query: 65 VKIALQQNLTILQATERINAAKENIL----SVRADLFPS-------SYASISHRFIPNLK 113 ++ L N + + A E L + D++PS + + +P L+ Sbjct: 65 IRSVLAGNANY----QALQAKAELFLLQYKGAQKDIYPSVELELAGNRQQVMRGALPGLE 120 Query: 114 TNSTGQLD--SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + QL DW+ DL+G+ R ++L S + A+L++ ++ + + Sbjct: 121 ASKNAQLSLTVDWEFDLWGRLRASKRAALLQYQSEKEALHYAQLSLAAQGAKVWFERAEA 180 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + +++ Q L ++ + ++ ++ G +S +L +++A++ ++ + K R+ Sbjct: 181 LQLLALGEQELKSWQLSKDVLQRRYRGGESSATALHQVDAQLALADAQV----KQMRLQS 236 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 N+ L A E S P++ +P I RPD++ L S A Sbjct: 237 ANVERKLSVLAGELPVREATPSQVVLPSIPDFDVQQVPLASIEQRPDVKAAMAALKASDA 296 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL--PIFDKGKIKSNIRRAE 348 + A LYP L+ AL +T +F L + PIF +G +K ++A+ Sbjct: 297 RASAAYYALYPQFRLSLVPALVSGQLTSADSTANTFNSSLAVLQPIFSRGNLKLESKKAQ 356 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 +AQ++Y + +T+L+A E+ L ++ + +V +L Sbjct: 357 LAAQQEYWRYVQTLLDA---SESILAKVDGQQSLVGQL 391 >gi|238758225|ref|ZP_04619404.1| outer-membrane efflux lipoprotein [Yersinia aldovae ATCC 35236] gi|238703555|gb|EEP96093.1| outer-membrane efflux lipoprotein [Yersinia aldovae ATCC 35236] Length = 443 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 87/447 (19%), Positives = 194/447 (43%), Gaps = 37/447 (8%) Query: 23 EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERI 82 +Y +P + + P + I +S ++ WWE+F+D +L + + L N + A ++ Sbjct: 5 DYQRPMLSV-PDSWRIKDSGGGYLNHSVHWWENFDDPTLTENINRMLVSNNDLTVAGLKL 63 Query: 83 NAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RR 133 A+ + +L P S+ S++ P + N + L +++DL+G+ R Sbjct: 64 QQARLSAGLTNTNLHPNITLNGAGSNTRSLNENTQP--RENYSTSLGLSYELDLWGKLAR 121 Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + S +++ L++I Y F +++ + + + +++L Sbjct: 122 ARDQSQWTVNATEQDRQETALSLIGTTADVYWQIAKFNQQLRYQQAAVVIAQDSLKLVRS 181 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G S++ L++ + + + + R N +L A + Y Q + N Sbjct: 182 RLGAGDASEIELLQAQQALLD-RQNQYQNLQQQREAARNAMAVLFNRAPD---YRQAERN 237 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + +PI+ +P +I RPD++ E +L ++A +AK + YP+LSL S+ Sbjct: 238 SLDLQQQVPISASLPLQVIAQRPDVQAAEWRLRAALAGSDMAKLNFYPTLSLGASL---- 293 Query: 314 DNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 ++ + W P LP ++ I ++ + + ++ V +A+K Sbjct: 294 -DAGSAIFSQWFSNPSRTLSVSSALPFLQWNTVQLTIEQSTLDVKLAAVDFRRKVYSALK 352 Query: 368 EVENALTSINEDKKIVTKLQ-----HAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 +V++A+T +++ +LQ ++L ++ ++L+ Y+ G S +LD + A Sbjct: 353 DVDDAMT-----QRVSYQLQKENQWQNLQLSQRRLTLTSSQYQAGAVSFQTLLDAQDALL 407 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSG 449 E L + + + L++A+G G Sbjct: 408 TSETSLLELQYNYLNATMKLWLALGGG 434 >gi|145636172|ref|ZP_01791842.1| hypothetical protein CGSHiHH_09495 [Haemophilus influenzae PittHH] gi|145270694|gb|EDK10627.1| hypothetical protein CGSHiHH_09495 [Haemophilus influenzae PittHH] Length = 454 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 77/414 (18%), Positives = 180/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLVQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTIGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|328724385|ref|XP_003248131.1| PREDICTED: bifunctional protein aas-like [Acyrthosiphon pisum] Length = 464 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 16/264 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K++ G+ S+ +L + + +++S + + + H I+ LLG +F + K Sbjct: 7 KYSAGSESRATLAQAQMQLESARASAQDYQWQRAQSEHAIALLLGRAPADFSLPVAKLDA 66 Query: 254 NFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSI 309 PN +P+ L++ RPDI Y E+ +A + A +G+A + YP L+L+ G + Sbjct: 67 TLPAIPN-------SLPSALLQRRPDIAYAERNVAAANAAVGVAIAGYYPDLTLSATGGV 119 Query: 310 ALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + + NS F N WS GP+L + D G + + +A ++ ++++VL A+ E Sbjct: 120 SSSAINSLFSLPNRVWSLGPELSGTLLDFGATSAKVEQARAAYDASVADYRQSVLTAMGE 179 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 VE+ L +N K + Q A ++S ++ Y G LD+ E ++ L Sbjct: 180 VEDYLVQLNTLKGEIASQQLATSAAQESARVTRNQYDAGMIDYLDVATTENSSLTGAEKL 239 Query: 429 SIAKRQLAKSYVDLY-IAIGSGYN 451 RQ+ Y + Y I I GY Sbjct: 240 QEGTRQI---YAEKYGIRILEGYG 260 >gi|145632770|ref|ZP_01788503.1| hypothetical protein CGSHi3655_08696 [Haemophilus influenzae 3655] gi|229844061|ref|ZP_04464202.1| hypothetical protein CGSHi6P18H1_06476 [Haemophilus influenzae 6P18H1] gi|144986426|gb|EDJ92992.1| hypothetical protein CGSHi3655_08696 [Haemophilus influenzae 3655] gi|229813055|gb|EEP48743.1| hypothetical protein CGSHi6P18H1_06476 [Haemophilus influenzae 6P18H1] gi|301170249|emb|CBW29853.1| conserved hypothetical protein [Haemophilus influenzae 10810] Length = 454 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/414 (18%), Positives = 180/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V+ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVEQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|167910702|ref|ZP_02497793.1| Outer membrane protein [Burkholderia pseudomallei 112] Length = 215 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 11/187 (5%) Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 GA S+ ++ ++E+ +P L + + H ++ LLG +N Sbjct: 5 GAASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA------APANLALA 58 Query: 258 NLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALT 312 +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P LSL+ S+ Sbjct: 59 DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMGHAGFK 118 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G WS G L P+F G + + R A +S +++TVL A ++V + Sbjct: 119 WPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADK 178 Query: 373 LTSINED 379 L ++ D Sbjct: 179 LAALEND 185 >gi|239993672|ref|ZP_04714196.1| RND efflux system, outer membrane lipoprotein, NodT [Alteromonas macleodii ATCC 27126] Length = 203 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 8/194 (4%) Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT- 322 +G+P+ L+ NRPDI+ L + I +AK++ YPS L + L+ +S +N Sbjct: 11 QVGVPSTLLDNRPDIKQAALTLQAAELNIDVAKANFYPSFELKAGLGLSAFDSRYLFNVP 70 Query: 323 ---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 +S ++ P+ ++ I++ + A + E ++ T+L A+ EV N+L+ ++ Sbjct: 71 ESLAYSLSGDVFAPLINRRAIEAVYQNASAEQIEAAYEYELTILTAVAEVTNSLSKLDNL 130 Query: 380 KKIVTKLQHAVELHKKSMSLS--MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +K +H + ++S+ ++ + + G Y L++L +R + + ++Q Sbjct: 131 EKSAEARRHQIASLEQSIDIANRLFSSAHGEY--LEVLLAQREALEARSEFIETRQQQMA 188 Query: 438 SYVDLYIAIGSGYN 451 + VDLY A+G G+ Sbjct: 189 ALVDLYQALGGGWQ 202 >gi|152993571|ref|YP_001359292.1| outer membrane efflux lipoprotein [Sulfurovum sp. NBC37-1] gi|151425432|dbj|BAF72935.1| outer membrane efflux lipoprotein [Sulfurovum sp. NBC37-1] Length = 464 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 94/413 (22%), Positives = 193/413 (46%), Gaps = 34/413 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--FI 109 W +F D L++LV A + N ++ A R+ A+ ++L P+ +R Sbjct: 60 WIRTFKDKKLDRLVDEAQRNNPSLKIAASRVERAEALTQLTESNLMPTVNMRGYYRDNNA 119 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSA-YAQVDIAKLNVISKLIPSYIDAR 168 + + G W+ D++G+ ++ ++ L +A A D A+ ++ + ++ Sbjct: 120 EGAQEIAFGGFGVSWEPDVWGRVGNLVAADRELTAAQLADYDFARQSLAANTARAWFLYN 179 Query: 169 HFKERISIAHQILDLYKKNIEL--SHLKFTQGATSKLSLVK--LEAEIKSIESDIPTLEK 224 S +I+ L +K +++ + K QG + L + + + S + + E+ Sbjct: 180 TNSRIYSFTKKIISLQEKTLKILEAREKIGQGNKRDVHLARALVASAKDSASAALSAKER 239 Query: 225 SFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQE 282 S R + L+G YP+ + ++ + + +P I G+PA L+ RPD+ E Sbjct: 240 SQRA----LEVLVGRYPSGKL--------SSGKLDTVLPRIPNGLPAQLLERRPDLIAAE 287 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 +++A + + A P++ LN + NS T + G + P++ G I++ Sbjct: 288 QRVAAAFHQKASADLLHMPNIRLNLGLG---PNSLNDAITSLAGG--ILAPVYTGGAIEA 342 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK---LQHAVELHKKSMSL 399 + A + +E + +T L A +EVENAL +K + T+ Q V+ +K + ++ Sbjct: 343 QVAVANAEQKEAIAQYAKTTLRAFQEVENALAG---EKHLATRYKATQEMVKEYKAAYTM 399 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 ++ YR G+ ++LDIL I+ E+ L + K++L + V+LY+A+G ++ Sbjct: 400 TVEKYRIGQSTVLDILIIQGKWISAEIQKLQVTKKRLI-NRVNLYLALGGSFD 451 >gi|298369454|ref|ZP_06980771.1| outer membrane multidrug resistance lipoprotein [Neisseria sp. oral taxon 014 str. F0314] gi|298282011|gb|EFI23499.1| outer membrane multidrug resistance lipoprotein [Neisseria sp. oral taxon 014 str. F0314] Length = 481 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 105/469 (22%), Positives = 202/469 (43%), Gaps = 40/469 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL-PTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 +I L + L+ C ++ K PL PT +S+ K+ + + WW +D LN L Sbjct: 26 SIGVLTVCTLSACA---QFGK-QAPLEEPTAYSLSEGKSAV-MAKDAWWLQLHDKKLNLL 80 Query: 65 VKIALQQNLTILQATERINAAKENI------------LSVR-ADLFPSSYASISHRFIPN 111 + A+Q + + A R + A+ + SVR A + S + N Sbjct: 81 IAQAIQTSPDLRVAKARFDQAQAQLGLTEAATKTQIGFSVRGAGAYVSPKPASRQGETDN 140 Query: 112 LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + L W+ D +G+ R I S L + + ++ + + + Y + Sbjct: 141 TLLLANAALQGSWEFDFWGKNRNQIASVLGKRQAILYEARQTRIMLANAVAAQYFAWQSL 200 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E+ + + + K ++L + SL ++E ++ + +LE+ Sbjct: 201 EEQQKLLARRTETADKTLQLMQRRVRAKLMPPESLYQIELLQHRLQLERLSLEQQTAKVR 260 Query: 231 HNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +++S L G P T + + ++ +N PNL P++ I ADL+ RPDI Q+ L Sbjct: 261 NSLSALTGNAPYTLPVRFPEEMANV--PNL--PVD-RIYADLLAVRPDIAVQKSLLESKY 315 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFP---GYNTHW-SFGPKLYLPIFDKGKIKSNI- 344 I +++ YP++ L + H ++F G N+ P L LPIF G ++S + Sbjct: 316 HAIKSTEAEFYPNIELKVLAGMAHIDAFNVIHGRNSAMLGILPALNLPIFTSGALQSKLW 375 Query: 345 -RRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKSMSLS 400 RRAE + EQ + TVLNA++ +A+ S+ K + K+ + KS+ Sbjct: 376 GRRAEYN--EQVAIYDRTVLNAMRSAADAVVDYQSLQAKKLVWDKM---LNTSGKSVRAV 430 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 + G + LD+L + ++++ + + ++ +L+ +G G Sbjct: 431 QNRVKVGLENGLDVLQKQEERLQLQMQAVQYQAEYLTAWSNLHAQLGGG 479 >gi|289624067|ref|ZP_06457021.1| outer membrane efflux protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 142 Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 69/129 (53%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS GP + FD G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + Sbjct: 12 WSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRL 71 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 L + + + L+ + YR+G L +LD ER E + A+ +L + V +Y Sbjct: 72 VSLMRQSDASRSAARLASVQYREGTADFLVLLDAERERLAAEDSQAQAEIELYRGIVAIY 131 Query: 444 IAIGSGYNP 452 A+G G+ P Sbjct: 132 KALGGGWQP 140 >gi|307823001|ref|ZP_07653231.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] gi|307735776|gb|EFO06623.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylobacter tundripaludum SV96] Length = 512 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 104/499 (20%), Positives = 202/499 (40%), Gaps = 69/499 (13%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKP----HMPLLPTQFS-IGNSKNLINIDTL---KWWES 55 L + +F++L + C P KP H P L S G + +WW Sbjct: 12 LFGAYVVFMLLASSCAWIPPGDKPAQFLHSPSLDHALSHTGRDEPHAPAGHWPPERWWRE 71 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----------------S 99 F+ + LN L+ +AL+ N+ + A R+ A+ + A L P Sbjct: 72 FSSSELNGLMDVALKDNVGLKVAAARLRQAQAMVRVEGARLLPFLDAEAEFENTRISENG 131 Query: 100 SYASISHRFIP--NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI 157 +A+++ + N+ + ++ D +G+ R + A L + Sbjct: 132 VFAALNRQEAAGANIVFGRINPFNFRYEFDFWGKNRAALEAALGEAEAEKAEQAEVLLQL 191 Query: 158 SKLIP-SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + I SYI ++++ + H + L + + + + G S + + E++ I Sbjct: 192 TGAIARSYIQGMALRQQLDLTHDMAKLRRDLLSMDETRLQLGLDSADPVKQAIIELEQIN 251 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLI 272 + + + ++ L+G N F + P I +PA +L+ Sbjct: 252 KREAGIRDQLDIQRNLLARLVGKGP-------DATQNLFADTVLSPERIRLPAQLPLELL 304 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG-----SIALTHDNS------FPGYN 321 RPD+ + + ++ +AK+ P++ L ++ +T S F G + Sbjct: 305 SQRPDLASALHRTEAAAQRVKVAKAGFLPTIDLTAFAGVNALRMTKGASSLANLLFSGSS 364 Query: 322 THWSFGPKLYLPIFDKGKIKSNI--RRAE-SSAQEQYITWQETVLNAIKEVENALTSINE 378 + P L LP+F+ G+++ + +RAE SA E Y ET+L A++EV ++L+ E Sbjct: 365 FSYGIAPGLRLPLFEGGRLRGELSAQRAEYDSAVELY---NETLLRAVQEVADSLSRWQE 421 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQG---RYSLL----DILDIERATAKVEVDLSIA 431 + I+ + ++++L+ + +R G R +LL +LD E ++ D +A Sbjct: 422 TQAILEAHGRLLSAQHENLNLAQVRFRSGLDDRRALLARRHTLLDQEYVLKNLQSDQLVA 481 Query: 432 KRQLAKSYVDLYIAIGSGY 450 VDL A+G GY Sbjct: 482 -------MVDLMEALGGGY 493 >gi|254243961|ref|ZP_04937283.1| hypothetical protein PA2G_04791 [Pseudomonas aeruginosa 2192] gi|126197339|gb|EAZ61402.1| hypothetical protein PA2G_04791 [Pseudomonas aeruginosa 2192] Length = 498 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 20/289 (6%) Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +A + L ++ ELS + + G SK+ L + + ++ + + E+ + Sbjct: 205 CDLAEEELKRSQRMTELSQKRMSAGLDSKVQLQQTQTQLATARQQLSAAEQDIASARIAL 264 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + LLG L + Q N +L +P + PA+L+ R DI ++ + I Sbjct: 265 AVLLGKGPDRGLELQRPQPLN-PASLSLPSVL--PAELLGRRADIVAARWRVEAARRNID 321 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 AK++ YP+L+L G AL + + + P + LPIFD G+ ++N+ ++ Sbjct: 322 SAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRFFQVAPAISLPIFDGGRRRANLAERDAD 381 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + +T++ A+ EV + L + ++ V + A ++ + + L+M Y +G S Sbjct: 382 YDLAVGQYNKTLVQALGEVSDDLGKLRSLEQQVIDQRQARDIARSNFDLAMRRYGEGVGS 441 Query: 411 LLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYI----AIGSGYNP 452 LD L +++ L +A+RQLA +DL + A+G G+ P Sbjct: 442 YLDALSVQQ-------QLLVAERQLASLESQQIDLSVQLVQALGGGFQP 483 >gi|167585008|ref|ZP_02377396.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 290 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 39/263 (14%) Query: 14 LLAGCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 LLAGC VGP+Y +P P+ P + + + D WW + D L+ L+ Sbjct: 24 LLAGCAVGPDYHRPDTPMPAAFKEAPAGWKVAQPAD--GADRGAWWRVYGDPQLDALIGK 81 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHRFIPNLKTNSTGQ------ 119 N TI Q+ A+ + RA FP+ AS S P +S Sbjct: 82 LNASNQTIAQSAAAYRQARALVAEARAAYFPTVGLTASGSRSRTPRASLSSGSSSSFGGG 141 Query: 120 ------------LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y Sbjct: 142 SSGSIGNSYSVGLDASWEPDLWGKVSRTVGAQRAGESAAAADLANARLSQQATLAQTY-- 199 Query: 167 ARHFKERISIAHQ-ILD----LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 F+ R + A Q +LD Y ++++L+ ++ QG ++ +++ + +++S ++ Sbjct: 200 ---FQLRTADALQKLLDDTAASYARSLQLTQNRYAQGVAARADVIQAQTQLQSAQAAAID 256 Query: 222 LEKSFRMNVHNISTLLGYPATEF 244 + H I+TL+G PA+ F Sbjct: 257 NGVARAQYEHAIATLIGEPASTF 279 >gi|319776279|ref|YP_004138767.1| Outer membrane efflux protein [Haemophilus influenzae F3047] gi|329123421|ref|ZP_08251985.1| NodT family efflux transporter [Haemophilus aegyptius ATCC 11116] gi|317450870|emb|CBY87094.1| Outer membrane efflux protein [Haemophilus influenzae F3047] gi|327471003|gb|EGF16458.1| NodT family efflux transporter [Haemophilus aegyptius ATCC 11116] Length = 454 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/415 (19%), Positives = 180/415 (43%), Gaps = 27/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V+ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVEQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADTASVDQAQQAILMARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 E + + LL E F H M N+ I +N+ +P +I NRP Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIM---------NVKIAGVNLNVPVSVIANRP 278 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIF 335 D++ + +L+ + + +P ++L S++ T + + G + LP Sbjct: 279 DVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFL 338 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 339 NWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQR 398 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y +I Y Sbjct: 399 ITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSIAGYY 453 >gi|86146702|ref|ZP_01065023.1| putative outer membrane transport protein [Vibrio sp. MED222] gi|85835549|gb|EAQ53686.1| putative outer membrane transport protein [Vibrio sp. MED222] Length = 402 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 96/415 (23%), Positives = 186/415 (44%), Gaps = 43/415 (10%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--LFPS--SYASISHRFIPN 111 FN+ +L LV+ AL N + + R+ A+ +L+ ++D L PS + S + Sbjct: 9 FNNQALADLVQEALTNNHDLHKTALRLKQAE--LLAAQSDQYLQPSLNTDFQASRQKTSQ 66 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLAN-------LDSAYAQVDIAKLNVISKLIPSY 164 ++ + L+ W+ D++G R +S AN LD AYAQ +A +++I ++ Sbjct: 67 IQNSHKLSLNLSWEFDVWG-RLADSASAANAKQQATQLDYAYAQNSLA-----ARVIEAW 120 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 +D + I + + L + + G + L A + + + E+ Sbjct: 121 LDVAYRARVIGVEQRWLQSLSNTENIVLEQVLDGFKEQADLDTARAATSRVRASLAAKEQ 180 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDI--RYQ 281 + + ++TL G T+ + F P + P + +P ++I +RPD+ YQ Sbjct: 181 DQLIAIRGLNTLRGKSDTQLNRMI------FTIPEVEAP-PLRLPGEMIGSRPDLLAAYQ 233 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + AD A +A DL P +L+ S+ + + N + W+ + P+ D+ Sbjct: 234 QVLAADKSA--AVAYKDLLPKFTLSASVYRSGSTPNQLIDNPSLWNLVGGISAPLLDQSS 291 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH-----AVELHK 394 +++ + A+ A+E ++ +Q+ +L AI EV NAL DK+ K Q A K Sbjct: 292 LQTQAKIAQLQAEESFVDYQKKLLVAINEVGNAL-----DKEFYLKQQEQHYRDAFTFSK 346 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 SM Y++G +L +L +++ + ++ L +R + + L +A+G G Sbjct: 347 ASMKNYQNLYQEGASDVLALLIAQQSIYQSKIQLLNTQRTRLSNRITLGLALGMG 401 >gi|16273365|ref|NP_439611.1| hypothetical protein HI1462 [Haemophilus influenzae Rd KW20] gi|1175810|sp|P45217|Y1462_HAEIN RecName: Full=Uncharacterized protein HI_1462 gi|1574302|gb|AAC23108.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 454 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/414 (18%), Positives = 179/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVGQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLVQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|312129627|ref|YP_003996967.1| outer membrane efflux protein [Leadbetterella byssophila DSM 17132] gi|311906173|gb|ADQ16614.1| outer membrane efflux protein [Leadbetterella byssophila DSM 17132] Length = 466 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/350 (22%), Positives = 161/350 (46%), Gaps = 42/350 (12%) Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQV-------DIAKLNVISKLIPSYIDARHFKE 172 L + W++D++ + R A+ +AY + + +++++ SY + + + Sbjct: 139 LVAGWEVDIWKKMR------ASKKAAYHRYMGTVEGRNFLVTQLVAEIAHSYYELQALDQ 192 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI---KSIESDI--PTLEKSFR 227 ++ I Q +L K + + L ++L++ + +A++ K++ D+ T+E R Sbjct: 193 QLEILEQNYELQSKVLNIISLLKNSTRANELAVSRFQAQVLKTKAMRFDLLQKTVEAENR 252 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 +N+ L+G + FQ G+P DL+RNRPDIR E +L Sbjct: 253 INL-----LVGRMPQKVERSKNSSLATFQ--------TGVPVDLLRNRPDIRRAELELEA 299 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKS 342 + AK YP+L++ G + N P Y + G + P+ +K I + Sbjct: 300 QKLDVYAAKMRFYPALAIEGGMGWQAFN--PTYLVKPASFLFQMGANMAGPLINKRAITA 357 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIVTKLQHAVELHKK-SMSLS 400 + + A + + ++ ++L A+ EVE + ++ N + KI K Q L++ +S Sbjct: 358 DYKSANAKQIQALYNYERSLLQAVIEVETEVKALENLESKIDLKKQEVEALNRSVEVSEK 417 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + NY + Y +++L +R +V+ +L ++ + ++LY A+G G+ Sbjct: 418 LFNYARADY--MEVLLTQREALEVQFELIESELMRKSAQINLYKALGGGW 465 >gi|209517379|ref|ZP_03266221.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] gi|209502146|gb|EEA02160.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. H160] Length = 488 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 97/484 (20%), Positives = 183/484 (37%), Gaps = 69/484 (14%) Query: 15 LAGCTVGPEYTKPHM---------------PLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 L C V P Y P + P+ P + KWW + D Sbjct: 10 LGACAVQPPYVPPTLDDHGVWANQSTFAPAPVPPEE---------------KWWTALGDP 54 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPN------ 111 L+ L+ A + ++ A ++ A+ + A P S AS H + + Sbjct: 55 VLDGLIDAAFASSPSLALAAAHLDEARATLGLKTAQSRPQVSFNASAEHARVQSGGGGIG 114 Query: 112 -------LKTNSTGQLDSDWKIDLFGQRRHIESSLAN----------LDSAYAQVDIAKL 154 + + TG W+IDLFG+ R +++ + +A Sbjct: 115 GGGGNTVVGSELTGGPTLAWEIDLFGRLRQAQAAAGSRLTARTADAAAARLLLAAQVAGA 174 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV----KLEA 210 + +D R F I + L L ++ + L + + SL L A Sbjct: 175 VTSLRACQVVLDVRRFD--IESQQRDLALTRQRVGLGFAPPVDESRALSSLADAQTSLVA 232 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLY--IP-INIG 266 + ++ D+ L + + +++ LG AT P + +P + Sbjct: 233 QDETCVQDLDALVELTGLTAADVAARLGAVRATGTAVGTATGGQGDHPFAFPNVPQATLA 292 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTH 323 +PA ++ P + E++LA + A+IG+A+++ P +L ++ ++ S Y Sbjct: 293 VPASVLAGHPAVIAAERELAATYAEIGVARANRLPVFNLTAALTGNWISASGSTISY-LA 351 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS P + PIFD G +++ A + T +ETV +++ENAL++ ++ + Sbjct: 352 WSLIPAVSGPIFDAGAGAASVDAASARYLAALATLRETVRTTTQDIENALSAQAHARERL 411 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 A + + ++ + +R G SL + D R E A R +++VD+ Sbjct: 412 AAASRARDAAQATLEATESQWRAGAVSLFQLDDTRRQRQAAEETAVDAARACVQAWVDVV 471 Query: 444 IAIG 447 A G Sbjct: 472 RASG 475 >gi|241761821|ref|ZP_04759907.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373735|gb|EER63295.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 488 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 108/488 (22%), Positives = 206/488 (42%), Gaps = 58/488 (11%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL----KWWESFNDTSLNK 63 S+ +LL GC P+ K P + +++L + WW+S+ D L++ Sbjct: 11 ISVAALLLTGCASIPKLGKA--PKVKDVHDYATAQSLAGNGSAWPGEGWWKSYGDPQLDQ 68 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRFIPN 111 L+ AL + + A RI +A + A L PS + + I Sbjct: 69 LMTEALAKAPDMAIAKARILSAAGSKQRAGAGLLPSVNGFVGTGAGHLMRDQEIRQGIKE 128 Query: 112 LKTNST-----GQLDSDWK------------IDLFGQ-RRHIESSLANLDSAYAQVDIAK 153 + S G DW ID++G R + ++ + +A A Sbjct: 129 AQGKSGSPSAGGDNFRDWGDGGSSFLTIRYNIDIWGGYRAKLAAATSEAKAAIVDSHEAA 188 Query: 154 LNVISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L + + + +Y + +R F+ER + ++ L + +EL+ + G + ++ A + Sbjct: 189 LTLTTSIAAAYANLSRLFEER-QVLNRTLAVRSHVLELTQQRLGHGLDNDSAMQDASARL 247 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + ++D+ ++S + H I+ L+G + + QS + + +P N + DL+ Sbjct: 248 ANAQADLTANQESIDLVRHQIAALMGAGPDRGMAITRPQSVKLRA-VGLPDNAAL--DLL 304 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGP 328 RPDI + ++ +AK+ YP++SLNG + + TH + Sbjct: 305 GRRPDIVAARLTAEAAGYRVKVAKTQFYPNVSLNGIVGY-QTRALEHMATHGLALGAASA 363 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIF G + R A ++ QE ++ +T+ A+++V +A TS K++ +L Sbjct: 364 ALNLPIFRGGSLSGQYREAWATYQEAVASYDKTLSQALQQVADAATS---QKQLNLQLDQ 420 Query: 389 AVE-LHKKSMSLSMI--NYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDL 442 V+ L+ +S +++ Y+ G + +++L E K DL QL V L Sbjct: 421 TVQALNHAELSYNVLANRYKSGLVTYIEVLQGEENVLTLRKAVADLRARAFQLD---VSL 477 Query: 443 YIAIGSGY 450 A+G G+ Sbjct: 478 IQALGGGF 485 >gi|33152836|ref|NP_874189.1| outer membrane protein [Haemophilus ducreyi 35000HP] gi|33149061|gb|AAP96578.1| probable outer membrane protein [Haemophilus ducreyi 35000HP] Length = 468 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/403 (22%), Positives = 180/403 (44%), Gaps = 63/403 (15%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------ 98 NID +WW+ +ND LN+LV AL N+ + ++ +N A N V A L P Sbjct: 46 FNIDE-EWWKGYNDPQLNRLVSQALANNVNLAKSAILVNKALYNANLVGASLVPTFSGSG 104 Query: 99 ------------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY 146 S +S S N+ N++ L + +DL+ RR +S+ A+ Sbjct: 105 SSSASKLLVSDGSLQSSNSVTKASNVVHNASFNL--SYTLDLW--RRLADSASASEWEYK 160 Query: 147 AQVD---IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 A ++ +L++I+ ++ SY + K+ I+++ Q + Y+ +++H+ Sbjct: 161 ATIEDLKATRLSIINAVVASYYQIAYLKDVINVSEQTIKNYE---QINHI---------- 207 Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPNLYIP 262 LE +++ D +E++ + ++ + L+GY T + + N +PN +P Sbjct: 208 ----LENKMEVGAIDHLAVEQAKQATLNARNGLIGYRTTLKVAEQTLRNLLNLKPNEPLP 263 Query: 263 I-------------NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 I ++ +P I NRPD+ + K+L + + + +P+++L SI Sbjct: 264 IEYPAILSVELQGVDMNVPISAIANRPDVAAKLKRLQSAFKSLSATEKSWFPTVTLGASI 323 Query: 310 ALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + + G N + L LP D +K+N++ +E+ + + +++ + +A+ E Sbjct: 324 SSSAAKLRNIGDNQLGNSMISLNLPFLDWQTVKNNVKLSEADYRLAKLNYEQVITSALNE 383 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 V+N + + + LQ E H K +S Y + RY L Sbjct: 384 VDNYYYAYQQAFDSYSTLQQVYE-HNKKISF----YYKNRYEL 421 >gi|77362283|ref|YP_341857.1| lipoprotein [Pseudoalteromonas haloplanktis TAC125] gi|76877194|emb|CAI89411.1| putative lipoprotein, possibly associated with the outermembrane [Pseudoalteromonas haloplanktis TAC125] Length = 470 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 84/418 (20%), Positives = 172/418 (41%), Gaps = 14/418 (3%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L +L+GC + + S + L NID WW+ LN+LV AL Sbjct: 19 LIAAMLSGCAAKIDAASEKNVVSEFIASANIASELNNIDETNWWQKLESAQLNQLVTDAL 78 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN---STGQLDSDWKI 126 N + + + +A + +A P I + TN S+ L +W++ Sbjct: 79 ANNHNLQTSQLVLKSALARLGEQQAQYLPQGGVEIGAQRSGLGDTNSRQSSANLALNWQL 138 Query: 127 DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 DLFG+ ++++ A+ S QV + ++ V+S ++ ++ + ++ I +D + Sbjct: 139 DLFGRITALVDAANASAMSQAEQVRLLQIEVVSSVVKGFVSYQGNVQKQHIVTLQIDALE 198 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 ++I + + +G ++L L + A++K ++ +P +E + ++ ++ L G A Sbjct: 199 QSIAVLQAQVDEGVANELDLNRTMAQLKQQQALMPAIEYAKYRDLSTLAVLSGQLAQNV- 257 Query: 246 HYMQKQSNNFQPNLY--IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + N Q L +++ + I RPDI + + + A L P + Sbjct: 258 -----KLTNEQAILEHKFTVSLNDANESIALRPDISQALYAFSQANSLSVAASKALLPDI 312 Query: 304 SLNG--SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 SL+G + NSF W P++ I + + + Q Y +Q+ Sbjct: 313 SLSGFAGVLSIGSNSFSDTQQQWQVAPQIQWSILSYPALIAQRDAQQLLTQAAYSDYQQV 372 Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +L A+ E E +L + + + + + + + Y +G+ L++LD R Sbjct: 373 ILQALSESELSLQLLVNQAQQKSFAEQRYQFANNAFLQAQAMYEEGQIPYLELLDARR 430 >gi|190573638|ref|YP_001971483.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] gi|190011560|emb|CAQ45179.1| putative outer membrane efflux protein [Stenotrophomonas maltophilia K279a] Length = 487 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 3/189 (1%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTH 323 +PADL+R+RP I E ++ + A G A++ +YP +SL GSI ++ N+ ++ Sbjct: 291 VPADLLRHRPQILLAESEVMQAAASKGAARAAMYPRISLGGSILYAYNLTQNARSNSDSS 350 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP + +P++D G+ ++ E + +++ VL + EVE AL S+ + Sbjct: 351 PSIGPYVDIPLWDWGQRRARFHADEKQLDAALLGYRKAVLEGVSEVEGALGSLARQDSSI 410 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 L+ A + + + + G S D LD +RA + DL A+ ++ LY Sbjct: 411 QSLRAANDAANQQVKRQARQVQLGLSSEFDGLDTQRAALASQADLIGAQGARVLAFASLY 470 Query: 444 IAIGSGYNP 452 A+G P Sbjct: 471 RALGGAPLP 479 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 30/165 (18%) Query: 17 GCTVGPEYTKP-HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC P P P TQ G + +D +WW+ D +L+ LV A+ NL + Sbjct: 45 GCMSVPVPDLPDRTPSAWTQVPQGQG---VAVDARQWWKVLADPALDGLVDQAVAGNLDL 101 Query: 76 LQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-------------GQLDS 122 QAT R+ A + I++ +D RF+P + ++ +++ Sbjct: 102 QQATLRLQAVR--IVAGTSD----------SRFLPEISASAKQVQDAAAVDTYFHAGIEA 149 Query: 123 DWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYID 166 W + LFG + S+ A+ +A A + A++ VI+ ++ SY+D Sbjct: 150 IWDLGLFGAAESAQLSAQASAGNAEALRNAAQVAVIADVVRSYLD 194 >gi|332160338|ref|YP_004296915.1| putative outer-membrane efflux lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664568|gb|ADZ41212.1| putative outer-membrane efflux lipoprotein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860230|emb|CBX70549.1| hypothetical protein YEW_IR37630 [Yersinia enterocolitica W22703] Length = 468 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 84/451 (18%), Positives = 193/451 (42%), Gaps = 27/451 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 G + EY +P + + P ++ + ++ ++ WWE+F+D L+ + L N + Sbjct: 20 CGSLLKSEYQRPMLSV-PDEWRVKDTGGGYLHHSVHWWENFDDPQLSDSISRMLVSNNDL 78 Query: 76 LQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKID 127 A ++ A+ ++ P S+ S++ P + + + L +++D Sbjct: 79 AAAGLKLQQARLTAGLTNTNMTPNVTLTGVGSNTRSLNENTQP--RESYSTSLGLSYELD 136 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+G+ R E S +++ L++I Y F +++ L + + Sbjct: 137 LWGKLARAREQSAWLVNATEQDRQETALSLIGTTADLYWQIAKFNQQLGYQQAALAISQD 196 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + + + G S++ L++ + + ++ +LE+ R N LL A + Sbjct: 197 TLNIVRSRLAAGDASEIELLQAQQTLLDRQNQYQSLEQQ-REAARNAMALLFNRAPD--- 252 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 Y Q + + + I +P +I RPD++ E +L ++A +AK + YP+LSL Sbjct: 253 YRQAERQSLDLKQQVAIANSVPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPTLSLG 312 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++ ++ + W P LP ++ I +++ + + ++ Sbjct: 313 ATL-----DAGSALFSQWFSNPSRTLSANSALPFLQWNTVQLTIDQSKLDVKLAAVDFRR 367 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A+K+V++A+T+ ++ ++L ++ ++L+ Y+ G S +LD + A Sbjct: 368 KVYSALKDVDDAMTARLSYQQQKQNQWQNLQLSQRRLTLTNSQYQAGAVSFQTLLDAQDA 427 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E L + + + L++A+G G + Sbjct: 428 LLTSETSLLELQYNYLNATMKLWLALGGGVD 458 >gi|255592986|ref|XP_002535766.1| Multidrug resistance outer membrane protein mdtP precursor, putative [Ricinus communis] gi|223522035|gb|EEF26617.1| Multidrug resistance outer membrane protein mdtP precursor, putative [Ricinus communis] Length = 662 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 173/414 (41%), Gaps = 20/414 (4%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISH 106 +WW FND LNKL+ + L+ N + +A RI A+ +L+ A P + H Sbjct: 3 EWWLVFNDDQLNKLLALGLRDNPGLAEAKARIGIAQGQVLAAGAGEMPHLDTGDDVTRIH 62 Query: 107 R------FIPNLKTNSTGQLDS---DWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNV 156 R I N KT + L+ +++DLFGQ + +I + A +A AQ + L + Sbjct: 63 RSANGDHAIYNDKTYTVANLNPLILTYRLDLFGQEQSNIAMAQAGSAAANAQYKQSMLLL 122 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + +I +Y + + + I+ L + + + F G + +A I Sbjct: 123 RAAIIKTYFALTTATKLVENQNDIIQLTRSQRAVRNAAFRAGLEPSSKTILEDANIAVAT 182 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 S + L + + + + LLG + S Q +PI I + I RP Sbjct: 183 SQLAELRQRQQALKYALLALLGKSPGDVTPISTADSQLPQS---LPIPATINLNTISRRP 239 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLP 333 D+ + A+ YP+++L I L + + ++ GP L LP Sbjct: 240 DVEMALWNARYFLHSEQSAQKAFYPNINLRALIGLNSIGLGSLLSSGSLTYAVGPALSLP 299 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G ++ + ++ + + +TVLNA +V L +++ ++I+ +++ + Sbjct: 300 IFDGGALQGRLNANAAAYESAIYGYNKTVLNAASQVATELANLDNTQQILAEVEKNLNRL 359 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ YR G + + + + E+ L+ AK + DL A+G Sbjct: 360 QAYALVTQAEYRSGLNDQSEAIGAKLKVSTAEIQLTQAKLRWLSVITDLATALG 413 >gi|323943162|gb|EGB39319.1| outer membrane efflux protein [Escherichia coli E482] Length = 276 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 21/244 (8%) Query: 11 FIVLLA--GCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNK 63 F V LA GC++ P+Y +P MP+ P QFS+ S+N + N W F D + Sbjct: 9 FCVALALTGCSLAPDYQRPAMPV-PQQFSL--SQNGLVNAADNYQNAGWRTFFVDNQVKT 65 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-------S 116 L+ AL N + AT ++ A+ AD +P S + NLK N S Sbjct: 66 LISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFS 125 Query: 117 TGQLDSDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 TG L++ + +D FG+ +++ E+ N L + AQ + L ++S + SY + + ++ Sbjct: 126 TG-LNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHIL-LVSNVAQSYFNQQLAYAQL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA + L Y+++ + G+++ L+L + I+S SDI + + + Sbjct: 184 QIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQ 243 Query: 235 TLLG 238 LLG Sbjct: 244 LLLG 247 >gi|307254672|ref|ZP_07536500.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259116|ref|ZP_07540846.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306862345|gb|EFM94311.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866783|gb|EFM98641.1| Predicted outer membrane protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 464 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 214/474 (45%), Gaps = 49/474 (10%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 F++F ++L C + K + LP QF N+ N + + + W+++ D L L++ Sbjct: 9 FAIFCLILTACH-NQDVAKLQSDIELPAQFEYANTANKV-TNIRQCWQNWQDPQLTALIE 66 Query: 67 IALQQNLTILQATERINAAKENILSVRAD------LFPSSYASISH----RFIPNLKTNS 116 LQ NL I A R+ + +AD S+ A +S R P+ K S Sbjct: 67 QGLQHNLDIKLAQARLAETQAYADYRQADQGINIGASGSTGAGVSDVNLDRVNPDRKKIS 126 Query: 117 T--GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 G ++ W++D FG+++ S A+ ++ A ++ LI I +F+ I Sbjct: 127 DIYGGINLSWELDFFGKKQ----SEADKATSLALAQQEQIYAAQMLITGEIANNYFR-II 181 Query: 175 SIAHQILDLYKKNIELSHLK------FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + Q +L ++ L LK F G + L +++ +I +I++ TL Sbjct: 182 ATDKQNNNLTQQLTALQTLKRYIQGRFNAGQATAYELNEIDGQISAIQAKQATLSAQADE 241 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 NI+ L+G F +QK N +P P+ L+ +RPD+R ++++ Sbjct: 242 FQRNIAILIGKAPQAF--RLQKNRNALIKIPNMPSGTQ-PSSLLDHRPDLRAAKQQVQAQ 298 Query: 289 VAKIGIAKSDLYPSLSL-----NGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGK 339 A + ++DLYP + G + L D +S G S G + LPIF G+ Sbjct: 299 AANLAGKQADLYPRFDITFQGQGGYLKLDQDLGNISSLAGLA---SLG--VQLPIFTNGR 353 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SINEDKKIVTKLQHAVELHKKS 396 I +NI AE+S + I + +T+L A+ EV++A ++N ++ K + + +K++ Sbjct: 354 IAANIEAAEASLKAALIQYDKTLLTALAEVDSAYQQQYALNNQNHLLQK--YYQQANKQA 411 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + ++ G +L L + A + L ++ A++ + LY +IG G+ Sbjct: 412 IDSEKL-FKYGDKTLDVALRAKIAAYSTQEKLIQSQLSQAQNLIRLYKSIGGGW 464 >gi|309973140|gb|ADO96341.1| Outer membrane efflux porin TdeA [Haemophilus influenzae R2846] Length = 454 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 77/414 (18%), Positives = 180/414 (43%), Gaps = 25/414 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLVQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIFD 336 ++ + +L+ + + +P ++L S++ T + + G + LP + Sbjct: 280 VKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTIGTALHNPVAAGTVGISLPFLN 339 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 340 WNTVKWNVKISEADYETARLNYEQRITTALNNVDINYFAFTQAQSTLSNLQQTHSYNQRI 399 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 400 TQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|318604429|emb|CBY25927.1| rnd efflux system, outer membrane lipoprotein CmeC [Yersinia enterocolitica subsp. palearctica Y11] Length = 468 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 84/451 (18%), Positives = 193/451 (42%), Gaps = 27/451 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 G + EY +P + + P ++ + ++ ++ WWE+F+D L+ + L N + Sbjct: 20 CGSLLKSEYQRPMLSV-PDEWRVKDTGGGYLHHSVHWWENFDDPQLSDSISRMLVSNNDL 78 Query: 76 LQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKID 127 A ++ A+ ++ P S+ S++ P + + + L +++D Sbjct: 79 AAAGLKLQQARLTAGLTNTNMTPNVTLTGVGSNTRSLNENTQP--RESYSTSLGLSYELD 136 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+G+ R E S +++ L++I Y F +++ L + + Sbjct: 137 LWGKLARAREQSAWLVNATEQDRQETALSLIGTTADLYWQIAKFNQQLGYQQAALAISQD 196 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + + + G S++ L++ + + ++ +LE+ R N LL A + Sbjct: 197 TLNIVRSRLAAGDASEIELLQAQQTLLDRQNQYQSLEQQ-REAARNAMALLFNRAPD--- 252 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 Y Q + + + I +P +I RPD++ E +L ++A +AK + YP+LSL Sbjct: 253 YRQAERQSLDLKQQVAIANSVPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPTLSLG 312 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++ ++ + W P LP ++ I +++ + + ++ Sbjct: 313 ATL-----DAGSALFSRWFSNPSRTLSANSALPFLQWNTVQLTIDQSKLDVKLAAVDFRR 367 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A+K+V++A+T+ ++ ++L ++ ++L+ Y+ G S +LD + A Sbjct: 368 KVYSALKDVDDAMTARLSYQQQKQNQWQNLQLSQRRLTLTNSQYQAGAVSFQTLLDAQDA 427 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E L + + + L++A+G G + Sbjct: 428 LLTSETSLLELQYNYLNATMKLWLALGGGVD 458 >gi|332703147|ref|ZP_08423235.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio africanus str. Walvis Bay] gi|332553296|gb|EGJ50340.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfovibrio africanus str. Walvis Bay] Length = 500 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 189/418 (45%), Gaps = 19/418 (4%) Query: 24 YTKPHMPLLPTQFSIGNSKNLINIDT--LKWWESFNDTSLNKLVKIALQQNLTILQATER 81 Y+ P + + P +S ++ ++ T W F D L++LV+ AL +N + AT R Sbjct: 62 YSAPEVSM-PQGWSAASAPTAESLSTSLAGWSSGFGDPVLDRLVEQALLRNNDLAAATIR 120 Query: 82 INAAKENILSVRADLFPSSYASISHRFIPNLK----TNSTGQLDSD--WKIDLFGQRRHI 135 + A+ + P+ A+ S +++ T L+ ++ DL+G + Sbjct: 121 VRRAQLQAGLAADQMIPALGATASTSHEKDIRHGGGTARAYALNGSVSYEADLWG-KLSS 179 Query: 136 ESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + A ++ + D L+++ + Y + RI ++ Q + +K + L Sbjct: 180 QYDAAKWEALATEQDRQSTALSLVGTTMNLYWRIAYLNVRIDLSGQSIAYAEKTLALVRA 239 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN-ISTLLGYPATEFLHYMQKQS 252 ++ GA S L + + E + S ++D L + R+ +N ++ L P + + Q Sbjct: 240 QYRSGAASSLQVSEAEQSLASQQADQLDLLQQ-RVEAYNALALLFDGPPGDIVANPQVMP 298 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 P P++ G+PA+L+ RPD++ E +L +A ++ YPSL+L G++ + Sbjct: 299 EGELP----PVDAGLPAELLGRRPDLQAAELRLRKLLADTDATRASFYPSLTLTGTLGSS 354 Query: 313 HDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + N + +L LP +++ +++ +++ +E + ++T+ A+ EVEN Sbjct: 355 STSLSEVLRNPIAALATQLALPFLQWNEMRLSVKSSQAEYEEAVVNLRQTLYQALGEVEN 414 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 AL++ + L+ A+ ++ + + YR G SL LD + E+ L+ Sbjct: 415 ALSARRMLAEQGASLERALAAARQVERMYEVRYRAGYVSLNVWLDAQETRRTSEIALA 472 >gi|319897091|ref|YP_004135286.1| outer membrane efflux protein [Haemophilus influenzae F3031] gi|317432595|emb|CBY80956.1| Outer membrane efflux protein [Haemophilus influenzae F3031] Length = 454 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 79/415 (19%), Positives = 180/415 (43%), Gaps = 27/415 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++++ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVIEQALTNNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLAQGVADTASVDQAQQAILMARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRP 276 E + + LL E F H M N+ I +N+ +P +I NRP Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIM---------NVKIAGVNLNVPVSVIANRP 278 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP-KLYLPIF 335 D++ + +L+ + + +P ++L S++ T + + G + LP Sbjct: 279 DVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHNPVAAGTVGISLPFL 338 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + +K N++ +E+ + + +++ + A+ V+ + + + ++ LQ +++ Sbjct: 339 NWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQSTLSNLQQTHSYNQR 398 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L + L ++ + AK Q+ +S +Y ++ Y Sbjct: 399 ITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENAVYSSMAGYY 453 >gi|325526795|gb|EGD04296.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 253 Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 37/256 (14%) Query: 10 LFIVLLAGCTVGPEYTKPHM-----PLLPTQFSIGNSKNLINIDTL--KWWESFNDTSLN 62 L + L A +VGP+Y P PL N L++ D + WW+ ++D L+ Sbjct: 3 LALALGACKSVGPDYKLPQQAYVNAPLANHALDDANG-TLVSHDAVPGNWWQLYDDPVLD 61 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADL--------FPSSYASISHRF------ 108 LV+ AL+ N + R+ AA N+ RA L F S + R Sbjct: 62 DLVRSALKSNTDL-----RVAAA--NLARSRAALQVASEQGGFSGSAEAAVQRAQESAEQ 114 Query: 109 ------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLI 161 +P + G S +++DLFG+ RR +E++ A+ ++ A D+A++ V++ ++ Sbjct: 115 YLLENKLPVVNEGVVGVNVS-YELDLFGKLRRGVEAARADSEAVKAAGDLARITVVADVV 173 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+++ E ++IA + + L K+ + LS G ++ + + +++++ +DIP Sbjct: 174 RAYVESCSAGEELAIAKESVALQKQRVTLSQRLRDAGRGNQTDVTRGVTQVRTLIADIPR 233 Query: 222 LEKSFRMNVHNISTLL 237 E ++ + ++ LL Sbjct: 234 FEGRRKVAQYQLAALL 249 >gi|225873130|ref|YP_002754589.1| efflux transporter, outer membrane factor (OMF) family [Acidobacterium capsulatum ATCC 51196] gi|225794538|gb|ACO34628.1| efflux transporter, outer membrane factor (OMF) family [Acidobacterium capsulatum ATCC 51196] Length = 442 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 192/390 (49%), Gaps = 45/390 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP-----NLKT 114 SL++ ++AL N T+ I+ +K N + A L P+ +FIP NL + Sbjct: 47 SLDQAEQMALAHNRTLRADLMLISESKAN--EITAGLRPNPVFDTDAQFIPFFSPSNLNS 104 Query: 115 N---STGQLDS--DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS--------KLI 161 + ++ Q D+ +K +L+G+R+ A + SA A + ++IS ++ Sbjct: 105 DYMDNSAQFDAGLSYKFELYGKRK------ARIQSARA-ATVVTSSIISNDERQLRYQVA 157 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +I+ + + ++ A Q L + K++ +S ++ G+ S +L+KL+ + ++D+ + Sbjct: 158 TQFINVLYAESKLRFAEQDLATFDKSLSISQKQYQAGSISHGNLLKLQLQRLLFQTDVTS 217 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + + N+ L+G+ + + + + QP L + + + AD +++RPD++ Sbjct: 218 AQVAVVQAKDNLRQLVGFDSVPQNYDVIGKLEAPQPKLGL---MDMEADALKSRPDLQAA 274 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + + S +++ +AK+D +P L ++ TH G N +F + +PIF++ + Sbjct: 275 RQLILQSQSQLHLAKADAHPDLGT--TVDYTH---LAGNNDLSAFA-TIGIPIFNRN--Q 326 Query: 342 SNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA-VELHKKSM 397 NI +A + AQEQ ++ VL +V +A ++V + ++ ++S+ Sbjct: 327 GNIAKASAQITQAQEQERAAEQLVLT---QVRSAYARQQSALQVVDLYESGYLKEAQQSL 383 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVD 427 S+S Y +G SLL+ LD ER+ VE++ Sbjct: 384 SISQYAYLRGDTSLLNFLDAERSYRTVELN 413 >gi|330505724|ref|YP_004382593.1| outer membrane efflux protein [Pseudomonas mendocina NK-01] gi|328920010|gb|AEB60841.1| outer membrane efflux protein [Pseudomonas mendocina NK-01] Length = 460 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 94/417 (22%), Positives = 175/417 (41%), Gaps = 32/417 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRF 108 WW +F LN LV ALQ N + A R+ A+ A P S+ + R Sbjct: 48 WWRAFASAELNALVSQALQHNHDLDAAAARLRQAEALARGANAAFLPRVDGSFGASRERR 107 Query: 109 IPNLK-----TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + T TG L S +++DL+G+ ++ A L + D +L++ + L+ Sbjct: 108 LGGQDDGAGNTYDTGLLAS-YEVDLWGRLSASRNAAQAELAARRFDRDALRLSLTATLVE 166 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +++ ER+ +A L ++ + ++ GAT+ L L + + + L Sbjct: 167 TWLRQVALAERLRLAELNLSNAQRVLRTVEARYAAGATTPLELAQQRGLLAEQRRNRAEL 226 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + +++ LLG ++ M N Q +P+ G+P+DL+ RPD+ E Sbjct: 227 RQQAEDLHSSLAVLLGQ--SQPAAAMDSALNALQ---AMPLAAGLPSDLLLRRPDLARAE 281 Query: 283 KK------LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + + + + DL N S +L+ + P Y S L PIFD Sbjct: 282 AQLRAADADLRAARAALLPRLDLSAGAGGNAS-SLSRVLANPLY----SLAAALSAPIFD 336 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + + + + +E ++++ ++ A +V+ AL + + Q ++ Sbjct: 337 GGALAAARDASSARREELLASYRQRIVEAFADVQTALNAGAGVEARWRAQQEVQAQAARA 396 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVE---VDLSIAKRQLAKSYVDLYIAIGSGY 450 + L+ Y+ G LL++LD +R+ E L +A+ Q S V L A+G G+ Sbjct: 397 LQLAEERYQAGADDLLNLLDAQRSLYAAEDQSAQLHLARLQ---SSVALARALGGGW 450 >gi|282857954|ref|ZP_06267157.1| putative outer membrane efflux protein [Pyramidobacter piscolens W5455] gi|282584213|gb|EFB89578.1| putative outer membrane efflux protein [Pyramidobacter piscolens W5455] Length = 430 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 79/409 (19%), Positives = 175/409 (42%), Gaps = 50/409 (12%) Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 D S+ + + AL+Q+ T+ + +N AK +I+ R + P S++ ++ N Sbjct: 23 QDLSIGEAIATALEQSPTLNARRQELNKAKGDIVQARGNFLP--RLSLTGQYSDNRSPTV 80 Query: 117 TGQLDSD-------WKIDLFGQRRHI---ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +G +D +L+ RH + A L A V A+ + + ++ Sbjct: 81 SGGSRTDSVSGGIALTQNLYAGGRHAAQRRQAQATLSQAELGVREAEEALAVNVYDAFYG 140 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E+++ A ++ +K+++ G ++L +++ E ++ + E+ + + +F Sbjct: 141 VILAREKVAAARDAVETSRKHLQEVRQMLGVGLANQLEVIRAEQQLSANEAALASSRGAF 200 Query: 227 RMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN--------RPD 277 + L+G P++ L P+ + P R R D Sbjct: 201 DAERITLLNLMGLAPSSALLPKG-------------PLELADPRGTARQSVALAQKRRAD 247 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-----HWSFGPKLYL 332 + EK++A +I I + + PS L+ T D S P N W L + Sbjct: 248 VAMLEKQIAIQSEQIKIVRGAMKPSFDLSA----TADYSDPYRNQDAGDDSWKATLTLEI 303 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P++D+G+ + + +A++ ++ ++ L+ + E+E A I + V + ++ L Sbjct: 304 PLYDRGQTRGEVMKAKAVQEQNKQALRQKELDVLSEIELAWVEIGDSAVQVEAHRKSLAL 363 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 ++++ LS + YR+G LD+L+ + +L+ A++ ++S D Sbjct: 364 ARETLRLSQVGYREGVTPQLDLLE-------AQSNLTAARKDYSQSLFD 405 >gi|167841323|ref|ZP_02468007.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 228 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 107/194 (55%), Gaps = 13/194 (6%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGY 320 G+P+DL++ RPD+ E+ +A + A+IG+A++ +P ++L S AL D + F Sbjct: 2 GLPSDLLQRRPDVASAERAMAAANAQIGVARAAYFPRITL--SPALGWDATRFASLFAAP 59 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + WS G L P+F+ G++ + + A++ +++TVL A +EV+NA+T ++ Sbjct: 60 SLLWSVGASLAQPLFEGGRLAAGVAYAQAGYAAAQAAYRQTVLAAFEEVQNAVTGLSVLD 119 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAK 437 + + + AV+ ++ + L+ Y G + +D++ ++ A+ + EV + + Q A Sbjct: 120 EAERRARSAVDDAQRLVGLAQDRYAGGLTAYIDVIGAQQQLLASERQEVQI---RGQRAA 176 Query: 438 SYVDLYIAIGSGYN 451 V L A+G G++ Sbjct: 177 LVVYLAKALGGGWS 190 >gi|284049030|ref|YP_003399369.1| outer membrane efflux protein [Acidaminococcus fermentans DSM 20731] gi|283953251|gb|ADB48054.1| outer membrane efflux protein [Acidaminococcus fermentans DSM 20731] Length = 430 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/377 (22%), Positives = 172/377 (45%), Gaps = 24/377 (6%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L K V++AL N ++ + + AAK N+ + + S S + ++N G Sbjct: 36 LGKTVRMALDNNSSVKISAAELEAAKANLDQAKGARWGSIDFSHTSGRTEKYQSNVIGNN 95 Query: 121 DSDW---KIDLFGQRR---HIESSLANLDSAYAQVDIAKLNVISKLIP--SYIDARHFKE 172 S+ + ++ R I+ + NLD Y Q ++ ++ Y D Sbjct: 96 HSNAVSITVPIYTGGRLEGAIDQAKKNLD--YYQYGMSSSYQTTRYNAEKGYYDVLQAAN 153 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +++ + ++ ++++ + +F G +K +++ + E+ + + + E ++ + V + Sbjct: 154 TVNLDKETVNRLDEHLKNTQAQFAVGVVAKADVLRSQVELVNAQQTLTQAENNYEVAVSS 213 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++ ++G P L+ Q ++PN Y N A + NRP+I E + + A Sbjct: 214 LNNVIGLPTATRLNLSQGLE--YKPNDYTLDNCVTYA--MANRPEIHQAEASVGMAQAAQ 269 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESS- 350 IA + P +SL S A ++D +FPG N +W+ G + I+D G + +R A+++ Sbjct: 270 KIANAGSLPQVSLGASNAWSND-TFPGQNRDNWTVGLNITQNIWDYGVNAAKVREAKANV 328 Query: 351 --AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 AQE Y + V A++ + S+ E +K + + AV ++ ++ + YR G Sbjct: 329 VKAQESYRQISDQVRLAVR---TSYLSMREAEKRIKTTEVAVAQAEEDYRIAQLRYRAGV 385 Query: 409 YSLLDILDIERA--TAK 423 + D++D A TAK Sbjct: 386 GTNTDVMDASVALTTAK 402 >gi|296103787|ref|YP_003613933.1| multidrug resistance outer membrane protein MdtQ [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058246|gb|ADF62984.1| multidrug resistance outer membrane protein MdtQ [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 472 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 97/475 (20%), Positives = 188/475 (39%), Gaps = 51/475 (10%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI----NIDTLKWWESFNDTSLNKLVK 66 F ++LAGC P L TQ S+ S N + N WW+++ND L+KL+ Sbjct: 13 FAIILAGCAPQHATVTP----LNTQ-SVTASVNTVLPHQNWPENAWWKAYNDPQLDKLIA 67 Query: 67 IALQQNLTILQATERIN---------------------AAKENILSVRADLFPSSYASIS 105 AL + A +RI A+ +S + P + + Sbjct: 68 KALSDAPDMQIARQRITLAEAQAKAALAADGPQIDFSADAERQKMSAEGLMGPFAITDPA 127 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 TN T L + W +DL+G+ R +E+ + +++ A+++ + + S + Y Sbjct: 128 AGTTGPWYTNGTFGLTAGWDLDLWGKNRARLEARIGKVNAQKAELEQTRQLLASSVARLY 187 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 D + + QI I + G TS + V+ + E I + Sbjct: 188 WDWQTQAAVEEVLTQIKSQQDNIIGADRELYQHGITSSVEGVETDISASKTEEQIAEVHG 247 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + ++ L PA + P + + + +L+ RPD++ Sbjct: 248 KMKAIEARLNALTNTPALALTRHAL-------PTVEASLPSTLGYELLARRPDLQAAHWY 300 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + S++++ A++ YP ++L + AL + F L LPIFD G++ Sbjct: 301 IEASMSEVDAARAAFYPDVNLMAFLQQDALHLSDLFRSSAQQMGVTAGLTLPIFDSGRLN 360 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + A++ + + V++A+ +V + +E + + K QH ++ K + + Sbjct: 361 AQLDIAQAQNNLSVANYNKAVVDAVNQVAR---TASEVEMLTAKNQHQQQVEKDAARV-- 415 Query: 402 INYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVD----LYIAIGSGYN 451 + Q R+S I + A++ + +A L Y+D L A+G GY+ Sbjct: 416 VALAQARFSAGIIAGSRVSEARIPALKEHLAGLMLQGEYIDATLQLTSALGGGYH 470 >gi|264677049|ref|YP_003276955.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] gi|262207561|gb|ACY31659.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni CNB-2] Length = 498 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 107/470 (22%), Positives = 204/470 (43%), Gaps = 41/470 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 +LA C PE+ M P ++ + + +D + +WW+ + D L++L+ AL+ Sbjct: 26 AVLAACAQIPEWEGKAMLAQPVPETLQAASHAPPMDWPSQQWWQRYGDAQLDQLIAEALE 85 Query: 71 -------------QNLTILQATERINAAKENILSVRADLFPS--SYASIS-HRFIP-NLK 113 Q +L +E AA LS RA + SY ++ F P +K Sbjct: 86 GAPDMAAAAARVLQARAMLGVSE---AASAPQLSARASVSEDKLSYNHLTPEAFAPRGMK 142 Query: 114 TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 LD W +DL+G QR + ++ L + A A+L + S + +Y Sbjct: 143 DYGRATLDLSWSLDLWGKQRAAVAAAAGELAAREADAAQARLLLSSNVALAYAQLLRLAA 202 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 Q + + + EL ++ G ++ S+ A + + ++++ +++ + ++ Sbjct: 203 NTQTLEQSVQVRRTTAELFEQRYANGLENQGSVHSARARLAAAQAELAQMQEQVGLQRNS 262 Query: 233 ISTLLGYP----ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI---RYQEKKL 285 I+ L+G A L + QS +Q +P + PA L+ RPD+ R + L Sbjct: 263 IAALIGAAPDRGAAIVLDAGRLQSP-WQQQWALPEQL--PAHLLGRRPDVVAARLHAQAL 319 Query: 286 ADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 VA +++ YP ++L+ G +L D + S GP + LPIF+ G+++S Sbjct: 320 ESRVAS---QQAEFYPDVNLSAFVGVQSLGLDMLTRSGSGIASVGPAVSLPIFNGGRLRS 376 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + A + E ++ + A++EV + S + +T +Q AV ++ ++ Sbjct: 377 QLGAARARYDEAVAQYRSMLNRALQEVADNAVSQRALQHQLTAMQQAVTAATEAHRVARN 436 Query: 403 NYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G LD+L E + A V + + R L + L+ A+G G++ Sbjct: 437 RYEGGLARYLDVLSAEDQLLASVRQLVDVQSRALTLD-IGLHRALGGGWS 485 >gi|315123383|ref|YP_004065389.1| putative lipoprotein, possibly associated with the outermembrane [Pseudoalteromonas sp. SM9913] gi|315017143|gb|ADT70480.1| putative lipoprotein, possibly associated with the outermembrane [Pseudoalteromonas sp. SM9913] Length = 470 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 84/420 (20%), Positives = 175/420 (41%), Gaps = 22/420 (5%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +L + +L+GC + + +++ + D WW T LN+LV A Sbjct: 18 ALAVAVLSGCASKIDTAVHQQQINEFVAKAISAEQFMGEDEQNWWHKLGSTQLNQLVINA 77 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN---STGQLDSDWK 125 L N + + + +A I +A P ++ + TN S+ + DW+ Sbjct: 78 LANNYDLQTSQLVLKSALARIGEQQAQYLPQDGVAVGAKRSGLGDTNSRQSSANVALDWQ 137 Query: 126 IDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DLFG+ ++++ + S QV + ++ V+S ++ ++ + ++ I ++ Sbjct: 138 LDLFGRITALVDAANSQAMSQAEQVRLLQIEVVSAVVKGFVSYQGNLQKQQIIEMQIEAL 197 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 +++I++ + +G ++L L + A+++ ++ +P +E + ++STL A Sbjct: 198 EQSIQVLQAQVDEGVANELDLNRTMAQLRQQQALVPAIEYA---KYRDLSTLAVLSA--- 251 Query: 245 LHYMQKQSNNFQPNLY---IPINIGIPADLIRNRPDIRYQEKKLAD--SVAKIGIAKSD- 298 Q S N + + +++ P D I RPDI + L D + +A S Sbjct: 252 -QTTQSLSINDERTILTKAFAVSLAKPNDAIALRPDI---SRALFDFSQANSLSVAASKA 307 Query: 299 LYPSLSLNG--SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 L P +SL+G + N F W P+L + + + + +Q Y Sbjct: 308 LLPDISLSGFAGVLSLGSNGFSDTQQQWQVAPQLQWSLLSYPALLAQRDAQQFLSQAAYT 367 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +Q+ VL AI E E +L + + + + + Y +G+ L++LD Sbjct: 368 DYQQVVLKAINESELSLQYLVNQAQQSRFADERYQFANNAFLQAQAMYEEGQIPYLELLD 427 >gi|254497973|ref|ZP_05110736.1| outer membrane efflux protein [Legionella drancourtii LLAP12] gi|254352750|gb|EET11522.1| outer membrane efflux protein [Legionella drancourtii LLAP12] Length = 428 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 104/454 (22%), Positives = 192/454 (42%), Gaps = 68/454 (14%) Query: 28 HMPLLPTQFSIGNS--KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAA 85 H L P +F ++ K L N+ L WW+ F+D LN L+ + L+ N I A + A Sbjct: 4 HSQLAPKKFPSSSTAYKPLDNLPYLAWWQQFHDAELNNLMAMGLRNNTDIHIAIGNLEQA 63 Query: 86 KENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK------IDLFGQRRHIESSL 139 + +L V+ P+ + P L G + W + L+ Q++ + Sbjct: 64 RGELLQVKLSWIPTIQLFAGYSTNPALGV--PGAFYAIWPYYVLNIMKLYTQQK---KAT 118 Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 NL + A + +L VI ++ +Y +E++ + Q+ + K + LS + G Sbjct: 119 YNLQYSLAATEGVRLVVIGQIASAYFTLMSQQEQLRLLQQLDNDLKALVALSEQEIKAGL 178 Query: 200 TSKLSLVKLE-------AEIKSIESDIPTLEKSFRM----NVHNISTLLGYPATEFLHYM 248 + ++L +L A+IK I +I + E + R N +S + +F H Sbjct: 179 ENDIALAQLHSDEQLIAAQIKPILHNIVSSENALRYLINENPGRVSNKNNFAKLDFSH-- 236 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-- 306 F+P +PA ++ NRPD++ L + A +A SD +P+L L+ Sbjct: 237 ------FRPG-------SLPATVLNNRPDMKMAVYALKGAQASKLVAWSDFFPTLQLDEL 283 Query: 307 -GSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G L H + + WS P GKI ++ ++ E Y +TV Sbjct: 284 VGEAQLPHRKFIKVTDAYANWSLIPG------SIGKIVASKGAYKAKVAEFY----QTVR 333 Query: 364 NAIKEVENALTS---INEDKKIVTKLQ----HAVELHKKSMSLSMINYRQGRYSLLDILD 416 ++EV+ ++ +NE I + + H +L + + +I+Y++ S +++ Sbjct: 334 RILREVDTDYSANKRMNEQFTIYLRAEADYRHKYKLQQGLLKTGLISYKELLQSKINLDS 393 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + T + ++DL+I S V LY + GY Sbjct: 394 LALRTNQAKLDLAI-------SLVVLYQDLAGGY 420 >gi|188575702|ref|YP_001912631.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520154|gb|ACD58099.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 477 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 102/494 (20%), Positives = 203/494 (41%), Gaps = 102/494 (20%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNL---------------INIDTLKWWESFN-DTS 60 GC++ P Y +P + + P F + + +N + + F D Sbjct: 13 GCSLTPAYQRPAVSV-PATFGSPQAASAPASDRTDANATTTVALNEQARAFLQRFAPDRD 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRF 108 L LV+ AL N + +A ++ A+ + +A P+ ++ R+ Sbjct: 72 LRPLVERALAHNGDVRRAALQVEQARAHSGIAQASRLPALAVGAQQLRQHFDNPALDARY 131 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSY-- 164 +L + G ++++D FG+ + + + L S Y + D A+ +I++++ +Y Sbjct: 132 QQDLVIANAG--IGNFEVDFFGKLQAMSEAARQRYLASTYGR-DAARGALIAEVLRAYTA 188 Query: 165 -------------IDA----------RHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +DA RH++ + IA D ++ + +H+ QG + Sbjct: 189 ERTTAQALQQLQSLDADSAALLAIAERHYQVGL-IARDERDAQRRQADQAHVAALQGNDN 247 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + V+ + L+GY +T +Q P Sbjct: 248 HAAAVRA------------------------LQLLVGYDSTPVPGDLQGLIAADTP---A 280 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FP 318 + + L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F Sbjct: 281 SAWRALDSSLLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFS 340 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 + WSF P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + Sbjct: 341 AGHGLWSFMPQLNLPLFDGGRNRANLELAQVRKRADVVAYEQVIESAFREVANALDAHAT 400 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAK 432 + + + VE ++ + L+ ++ R + R +LL ER A+ E+D Sbjct: 401 LSQAEPRARAQVE--REQLRLARMHARVDAGLEDRSALL----AERTRIAQTELDYLDTA 454 Query: 433 RQLAKSYVDLYIAI 446 RQ S + L+ A Sbjct: 455 RQRVLSRIALFQAF 468 >gi|123443442|ref|YP_001007415.1| outer membrane efflux protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090403|emb|CAL13271.1| probable outer membrane efflux protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 488 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/394 (22%), Positives = 167/394 (42%), Gaps = 36/394 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L +++LAGC L Q + K + +WW D L+ L+ +L Sbjct: 13 LVVLILAGCASSDNIAPQSQMLDNQQLQLAQPKVSSLALSPQWWRVLEDPQLDALMSQSL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFI----------PNL 112 Q + ++ QA R+ A+ + A P S +S + P Sbjct: 73 QTSPSLKQAAARVREAQSVVGQADAANGPNLDLNGSSKREKVSQNTLQPFLQSYPDKPLY 132 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T++T L+ ++ D +G+ R + ++ A +++A A+ A L + S + Y + Sbjct: 133 ETSNTLGLNLSYEFDWWGKYRNRVNAANAQVNAARAEQQQAALTLTSSVASVYYQLQSNF 192 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ Q +D + EL ++ G + +A+ + + I L+ H Sbjct: 193 ALQNVLQQEVDNNDRLAELRTKQYQAGIYGIEIPQQTKAQADTAKQQIIQLQSQGEQLKH 252 Query: 232 NISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADS 288 ++ L G AT+ L + P++ G + DL+ RPDI Q + + Sbjct: 253 QLAALTGQGPNATQNLRQVPL------PDITRLAPKGELTTDLLGKRPDITAQRQLVESY 306 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--------WSFGPKLYLPIFDKGKI 340 ++ A+ + YPSLS+ G L+ N F G N + W+F P + LPIF G + Sbjct: 307 DQRVKAARKEFYPSLSITGFAGLSTTN-FQGTNPNLLEAASQAWNFAPAISLPIFHAGAL 365 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 +S + + E ++ +T+LNA++E +A+T Sbjct: 366 RSKLGEESALYDEAVESYNQTILNAVRETADAIT 399 >gi|227539292|ref|ZP_03969341.1| possible outer membrane efflux protein precursor [Sphingobacterium spiritivorum ATCC 33300] gi|227240974|gb|EEI90989.1| possible outer membrane efflux protein precursor [Sphingobacterium spiritivorum ATCC 33300] Length = 200 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 12/197 (6%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGY 320 P+ GIP+ L+ NRPDI+ E +L + + A+ + YPSL ++ ++ L +F P Y Sbjct: 7 PVYTGIPSQLLANRPDIKEAELELKAAKLDVEAARKEFYPSLEISAALGL---EAFKPSY 63 Query: 321 ------NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + + +L P+ +K IK+N + A++ + + +T+LNA ++ N ++ Sbjct: 64 LVKMPESIAFGLAGELAGPLINKSAIKANFQTADARQLQALYEYDKTILNAYLDIANLMS 123 Query: 375 SI-NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + N D+ K Q L + S+ ++ ++ R L++L +R +++L AK+ Sbjct: 124 KVKNIDQYYKMKSQETQALDE-SIEIANQLFKNSRADYLEVLLNQRDALDAKLELIEAKQ 182 Query: 434 QLAKSYVDLYIAIGSGY 450 + + VD+Y +G G+ Sbjct: 183 KQLSTVVDIYKGLGGGW 199 >gi|84623105|ref|YP_450477.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367045|dbj|BAE68203.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 489 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 302 LLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGLWSFM 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + + + + Sbjct: 362 PQLNLPLFDGGRNRANLELAQVRKRADVVAYEQVIESAFREVANALDAHATLSQAEPRAR 421 Query: 388 HAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVD 441 VE ++ + L+ ++ R + R +LL ER A+ E+D RQ S + Sbjct: 422 EQVE--REQLRLARMHARVDAGLEDRSALL----AERTRIAQTELDYLDTARQRVLSRIA 475 Query: 442 LYIAI 446 L+ A Sbjct: 476 LFQAF 480 >gi|224823586|ref|ZP_03696695.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] gi|224604041|gb|EEG10215.1| RND efflux system, outer membrane lipoprotein, NodT family [Lutiella nitroferrum 2002] Length = 460 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 182/424 (42%), Gaps = 39/424 (9%) Query: 52 WWESFNDTSLNKLVKIALQQ--NLTILQATERINAAKENILSVRADLFPSSYASISH-RF 108 WW++ D +L++L+ A +Q +L + A R AA + R + AS+ R+ Sbjct: 43 WWQALGDPALDQLIASARRQAPSLKLAAARVREAAALSGLADSRRGPQLDANASLDRERY 102 Query: 109 IPN----------LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 N +T LD W++DL+G+ R A LD+A Q L+ Sbjct: 103 SANGLLPPPIGGSYQTLYAISLDGGWELDLWGKHR------AELDAALGQQRAQALDARQ 156 Query: 159 K--LIPSYIDARHFKERISIAHQILD-----LYKKNIELSHLKFTQGATSKLSLVKLEAE 211 L+ + +++ + ++A Q L L ++L + + G S L LE Sbjct: 157 AELLLTQAVASQYTVLQRALAQQQLSTGRLKLADSRLQLLRARVSAGLLSADVLRPLEVL 216 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ + + H ++ L G A L + P+L + A L Sbjct: 217 QAQLKQQLSAQQGDAARARHALAALTGQ-APNALDALSPAPLGTTPDLD---EAALTAAL 272 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGP 328 + RPD+ Q ++L + + A++ YP++ L+ I L+ + P Sbjct: 273 LGQRPDVVAQRERLEAAAHSVKAARAAFYPNVQLSAFIGLSSLDIGQLLQSESRMLGIAP 332 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIF G +++N+ R ++ E ++ +TVL+A+++ +AL+ ++ ++ + + Sbjct: 333 AVTLPIFHSGALRANLSREQARYDEAVESYNQTVLDALRQAADALSGRDQARQQLADARQ 392 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDIL---DIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 A + +++ + R G + LD+L D E +D S A QLA +V+L Sbjct: 393 AEDSARRASDAGVARLRAGLSNKLDLLGTQDAELVQRAARLD-SQAAGQLA--FVNLNTV 449 Query: 446 IGSG 449 +G G Sbjct: 450 LGGG 453 >gi|166711395|ref|ZP_02242602.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 477 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 290 LLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGLWSFM 349 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + + + + Sbjct: 350 PQLNLPLFDGGRNRANLELAQVRKRADVVAYEQAIESAFREVANALDAHATLSQAEPRAR 409 Query: 388 HAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVD 441 VE ++ + L+ ++ R + R +LL ER A+ E+D RQ S + Sbjct: 410 EQVE--REQLRLARMHARVDAGLEDRSALL----AERTRIAQTELDYLDTARQRVLSRIA 463 Query: 442 LYIAI 446 L+ A Sbjct: 464 LFQAF 468 >gi|299532531|ref|ZP_07045921.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] gi|298719478|gb|EFI60445.1| RND efflux system, outer membrane lipoprotein [Comamonas testosteroni S44] Length = 498 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 107/471 (22%), Positives = 203/471 (43%), Gaps = 43/471 (9%) Query: 13 VLLAGCTVGPEYTKPHM---PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 +LA C PE+ M P+ P N ++ +WW+ + D L++L+ A+ Sbjct: 26 AVLAACAQIPEWEGKAMLAQPV-PETLQAANHAPPMDWPPQQWWQRYGDAQLDQLIAEAM 84 Query: 70 Q-------------QNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKT 114 + Q +L +E AA LS RA + SY ++ Sbjct: 85 EGAPDMAAAAARVQQARAMLGVSE---AASAPQLSARASISEDKLSYNHLTPEAFAPRGM 141 Query: 115 NSTGQ--LDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 N G+ LD W +DL+G QR + ++ L + A A+L + S + +Y Sbjct: 142 NDYGRATLDLSWSLDLWGKQRAAVAAAAGELAAREADAAQARLLLSSNVALAYAQLLRLA 201 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 Q + + + L ++ G ++ S+ A + + ++++ +++ + + Sbjct: 202 ANAQTLEQSVQVRRTTAGLFEQRYANGLENQGSVHSARARLAAAQAELAQMQEQVGLQRN 261 Query: 232 NISTLLGYP----ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI---RYQEKK 284 +I+ L+G A L + QS +Q +P + PA L+ RPD+ R Q + Sbjct: 262 SIAALIGAAPDRGAAIVLDAGRLQSP-WQQQWALPEQL--PAHLLGRRPDVVAARLQAQA 318 Query: 285 LADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L VA +++ YP ++L+ G +L D + S GP + LPIF+ G+++ Sbjct: 319 LESRVAS---QQAEFYPDVNLSAFVGVQSLGLDMLSRSGSGIASVGPAVSLPIFNGGRLR 375 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S + A + E ++ T+ A++EV + S ++ +T +Q AV ++ ++ Sbjct: 376 SQLGAARARYDEAVAQYRSTLNRALQEVADNAVSQRALQQQLTAMQQAVMAATEAHRVAR 435 Query: 402 INYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y G LD+L E + A V + + R L + L+ A+G G++ Sbjct: 436 NRYEGGLARYLDVLSAEDQLLASVRQLVDVQSRALTLD-IGLHRALGGGWS 485 >gi|58581183|ref|YP_200199.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425777|gb|AAW74814.1| outer membrane channel protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 523 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 102/494 (20%), Positives = 203/494 (41%), Gaps = 102/494 (20%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNL---------------INIDTLKWWESFN-DTS 60 GC++ P Y +P + + P F + + +N + + F D Sbjct: 59 GCSLTPAYQRPAVSV-PATFGSPQAASAPASDRTDANATTTVALNEQARAFLQRFAPDRD 117 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRF 108 L LV+ AL N + +A ++ A+ + +A P+ ++ R+ Sbjct: 118 LRPLVERALAHNGDVRRAALQVEQARAHSGIAQASRLPALAVGAQQLRQHFDNPALDARY 177 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSY-- 164 +L + G ++++D FG+ + + + L S Y + D A+ +I++++ +Y Sbjct: 178 QQDLVIANAGI--GNFEVDFFGKLQAMSEAARQRYLASTYGR-DAARGALIAEVLRAYTA 234 Query: 165 -------------IDA----------RHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +DA RH++ + IA D ++ + +H+ QG + Sbjct: 235 ERTTAQALQQLQSLDADSAALLAIAERHYQVGL-IARDERDAQRRQADQAHVAALQGNDN 293 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + V+ + L+GY +T +Q P Sbjct: 294 HAAAVRA------------------------LQLLVGYDSTPVPGDLQGLIAADTP---A 326 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FP 318 + + L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F Sbjct: 327 SAWRALDSSLLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFS 386 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 + WSF P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + Sbjct: 387 AGHGLWSFMPQLNLPLFDGGRNRANLELAQVRKRADVVAYEQVIESAFREVANALDAHAT 446 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAK 432 + + + VE ++ + L+ ++ R + R +LL ER A+ E+D Sbjct: 447 LSQAEPRARAQVE--REQLRLARMHARVDAGLEDRSALL----AERTRIAQTELDYLDTA 500 Query: 433 RQLAKSYVDLYIAI 446 RQ S + L+ A Sbjct: 501 RQRVLSRIALFQAF 514 >gi|329297257|ref|ZP_08254593.1| RND efflux system, outer membrane protein precursor [Plautia stali symbiont] Length = 289 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 16/242 (6%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +L V S + Y+ E++ + L+ + ++ L+ +F G TS+L ++ +E Sbjct: 31 ELTVASSVASGYLSLCALDEQLRVTEATLETRQNSLNLAQRQFETGYTSRLEWMQAASEY 90 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ ++ IP L+ + +S L+G + +S+ F + +P+ L+ Sbjct: 91 QTAKAQIPQLQHQIAQQENALSILVGMNPRQI-----ARSSQFDQLRAHALPALLPSQLL 145 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGYNTHWS 325 RPDI ++ L S A + A++ L PSL+L S L DN F WS Sbjct: 146 NRRPDIVQAQRLLLASDASLAAAQAQLLPSLNLTASGTLQSSQLHDLLDNPF----RLWS 201 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G + P+ ++ + + + A +S + ++ V NA EV+NAL +I ++ +T+ Sbjct: 202 IGGSVLAPLLNREALTAQVDVAMASRNQALYGYERVVRNAFAEVDNALDAITRSQQQLTE 261 Query: 386 LQ 387 LQ Sbjct: 262 LQ 263 >gi|238765056|ref|ZP_04625992.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia kristensenii ATCC 33638] gi|238696742|gb|EEP89523.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia kristensenii ATCC 33638] Length = 456 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 185/440 (42%), Gaps = 58/440 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA------DLFPSS-YAS 103 +WW D L+ L+ +LQ + ++ QA R+ A+ + A DL+ SS Sbjct: 22 QWWRVLEDPQLDALMTQSLQTSPSLKQAAARVREAQSVMGQADAANGPNLDLYGSSNREK 81 Query: 104 ISHRFI----------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 IS + P +T +T L+ ++ D +G+ R + ++ A +++A A+ A Sbjct: 82 ISQNTLQPFLQSYPDKPLYETANTLGLNLSYEFDWWGKYRNRVNAANAQVNAARAEQQQA 141 Query: 153 KLNVISKLIPSYIDARH-------FKERISIAHQILDLYKK-------NIELSHLKFTQG 198 L + S + Y + ++ + + +L K +IE+ Q Sbjct: 142 TLTLTSSVASVYYQLQSNFALQNVLQQEVDNNDSLAELRTKQYQAGIYSIEVPQQTQVQA 201 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 T+K +++L+++ + ++ + L N+ + P E K Sbjct: 202 DTAKQQIIQLQSQGEQLKHQLAALTGQGPSATQNLRPV---PLPELTRLAPKGE------ 252 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 + DL+ RPDI Q + + ++ A+ + YPSLS+ G + N F Sbjct: 253 --------LTTDLLGQRPDITAQRQLVESYDQRVKAARKEFYPSLSITGFAGFSTTN-FQ 303 Query: 319 GYNTH--------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 G N + W+F P + LPIF G ++S + + E ++ +T+LNA++E Sbjct: 304 GTNPNLLEAASQAWNFAPAISLPIFHAGALRSKLGEESALYDEAVESYNQTILNAVRETA 363 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 +A+T ++ + + A + +K S++ Y+ G ++L + + + Sbjct: 364 DAITIQQSSQRQLQQAISASQSMQKVYSVADARYKAGVIGRDELLISQSQYLQQQQSELS 423 Query: 431 AKRQLAKSYVDLYIAIGSGY 450 A L ++ + L ++G GY Sbjct: 424 ASNNLLQAKIGLIRSLGGGY 443 >gi|330863865|emb|CBX73957.1| hypothetical protein YEW_HT34220 [Yersinia enterocolitica W22703] Length = 488 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/394 (22%), Positives = 167/394 (42%), Gaps = 36/394 (9%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L +++LAGC L Q + K + +WW D L+ L+ +L Sbjct: 13 LVVLILAGCASSDNIAPQSQMLDNQQLQLAQPKVSSLALSPQWWRVLEDPQLDALMSQSL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFP-------SSYASISHRFI----------PNL 112 Q + ++ QA R+ A+ + A P S +S + P Sbjct: 73 QTSPSLKQAAARVREAQSVVGQADAANGPNLDLNGSSKREKVSQNTLQPFLQSYPDKPLY 132 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T++T L+ ++ D +G+ R + ++ A +++A A+ A L + S + Y + Sbjct: 133 ETSNTLGLNLSYEFDWWGKYRNQVNAANAQVNAARAEQQQAALTLTSSVASVYYQLQSNF 192 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ Q +D + EL ++ G + +A+ + + I L+ H Sbjct: 193 ALKNVLQQEVDNNDRLAELRTKQYQAGIYGIEIPQQTKAQADTAKQQIIQLQSQGEQLKH 252 Query: 232 NISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADS 288 ++ L G AT+ L + P++ G + DL+ RPDI Q + + Sbjct: 253 QLAALTGQGPNATQNLRQVPL------PDITRLAPKGELTTDLLGKRPDITAQRQLVESY 306 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--------WSFGPKLYLPIFDKGKI 340 ++ A+ + YPSLS+ G L+ N F G N + W+F P + LPIF G + Sbjct: 307 DQRVKAARKEFYPSLSITGFAGLSTTN-FQGTNPNLLEAASQAWNFAPAISLPIFHAGAL 365 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 +S + + E ++ +T+LNA++E +A+T Sbjct: 366 RSKLSEESALYDEAVESYNQTILNAVRETADAIT 399 >gi|270157576|ref|ZP_06186233.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|289164045|ref|YP_003454183.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269989601|gb|EEZ95855.1| outer membrane efflux protein [Legionella longbeachae D-4968] gi|288857218|emb|CBJ11039.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 452 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 93/443 (20%), Positives = 192/443 (43%), Gaps = 39/443 (8%) Query: 30 PLL--PTQFSIGNSKNL---INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINA 84 PLL P Q++ N + N+ WW+ FND +LN + L N I A I A Sbjct: 24 PLLVVPDQWAAKNKHYMNSNENLTCFAWWKQFNDPNLNSFIDRGLIYNNDINIAVAHIEA 83 Query: 85 AKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSL 139 A+ + V+ + P + Y+S + P + + + +++F Q + + + Sbjct: 84 AQGELKRVQLNWIPDVTGNAGYSSFPYLGFPGVLLTAV----PTYTLNIFKQIKEQQKAR 139 Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 L + + +L VIS++ +Y + E++S+ H + K I +S + G Sbjct: 140 YELKATKSMYHGIRLAVISQIASNYFNYLSQVEQLSLLHALEQDLSKLITISKTLYQGGL 199 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN--FQP 257 ++ E+ ++ ++ R+ NI LHY+ ++ + F Sbjct: 200 YAR-------TEVDLALTEFSLIQAKERVVQQNIVV-----RENALHYLLDENPDRVFVS 247 Query: 258 NLYIPIN-----IG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGS 308 + +N IG +P ++I NRPD+ +++L + A IG++ + L P+++L G Sbjct: 248 RRFRDLNGQKMIIGALPINIIENRPDMEQAKQELFAANAGIGLSFAPLLPAINLAMARGE 307 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 IA + G H F + F K + +A+ + Y + ET+ +++ Sbjct: 308 IAKVENGGQLGQAIH--FNQAIVEVPFLKASTYGQLIKAKGLDKASYYRYSETLRKVLRD 365 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 + N L++ + + + A K+ L+ Y++G S L ++ + ++ +++ Sbjct: 366 ITNDLSAHELYTRRLNDVLKAERELSKAYRLNQTLYQRGIISHLSLIKEKVRLDELAIEV 425 Query: 429 SIAKRQLAKSYVDLYIAIGSGYN 451 + K + + V+LY + +GYN Sbjct: 426 NQHKLEQLITVVNLYQDLAAGYN 448 >gi|254524851|ref|ZP_05136906.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas sp. SKA14] gi|219722442|gb|EED40967.1| RND efflux system, outer membrane lipoprotein, NodT family [Stenotrophomonas sp. SKA14] Length = 479 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 96/454 (21%), Positives = 196/454 (43%), Gaps = 29/454 (6%) Query: 18 CTVGPEYTKPHMPLLPTQF--SIGNSKNLIN--IDTLKWWESFNDTSLNKLVKIALQQNL 73 C++ P Y + P F + G S+ + + + +WW FND L+ L + N Sbjct: 15 CSLAPAYHGVPLQAAPGTFKEAPGWSEAVPSDAVGKGQWWTLFNDPQLDALQARVVVDNQ 74 Query: 74 TILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG----------QLDSD 123 + Q AA+ + RA L+P A + ++++G Q+ + Sbjct: 75 NVAQYRATYAAARALVQQQRAALWPQVTAQGTGTRSGGQGSDASGNAAGGRRYSVQVGAS 134 Query: 124 WKIDLFGQRRHIESSLANLDSAYAQVDIAK--LNVISKLIPSYIDARHFKERISIAHQIL 181 W+ DL+G R S A+ ++A + D+A L+ +L Y+ R + Q + Sbjct: 135 WEPDLWG-RVGNSVSQASAEAAASAGDLANATLSAQGELAIDYLQLRGLDAQHQDLAQTV 193 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 Y+++++++ K+ G + + + + + ++ + TL+ H I+ L+G Sbjct: 194 QGYQRSLDITGNKYAVGVAAAADVEQARTTLANAQAQLRTLDLQRAQLEHAIAVLIGENP 253 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + F + Q N P +P ++ P+ ++ R D+ E+++A + A IGI ++ +P Sbjct: 254 STF-RLVPAQWNERVP--AVPSSV--PSQVLLRRADVAAAERRVAAANANIGIQRAGYFP 308 Query: 302 SLSLNG---SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 +++G S A F + WS G +FD G + + +A + + + Sbjct: 309 QFTISGDRQSNATAWGQLFTASTSLWSLGISALQTVFDAGATRGRVAQARAEFDQAAAVY 368 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR--YSLLDILD 416 ++TVL A ++VE+ L ++ + A ++ + YR G Y+ + + Sbjct: 369 RQTVLGAFQQVEDNLVAMQVYADVSQSRVQAEAAANRAEVILRNQYRAGTVDYTAVVVAQ 428 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++A+ ++ RQ A V L AIG + Sbjct: 429 GTASSARQARIQAVVDRQTA--MVALAQAIGGSW 460 >gi|115375267|ref|ZP_01462532.1| putative outer membrane chanel lipoprotein [Stigmatella aurantiaca DW4/3-1] gi|115367734|gb|EAU66704.1| putative outer membrane chanel lipoprotein [Stigmatella aurantiaca DW4/3-1] Length = 442 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 90/390 (23%), Positives = 160/390 (41%), Gaps = 47/390 (12%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------SHRFIPNLK 113 +L + ++ AL+QN ++QA I AK + S PS AS S R P+ Sbjct: 41 TLEEAIERALKQNPQVIQAAGSIRTAKASERSAFGAYLPSLSASANSTLSSSDRLNPDTG 100 Query: 114 TNSTGQLDS-------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T +G DS W + G+RR + + A L SA AQ+ + +V + ++ Sbjct: 101 TIISGSNDSYSAGLSASWDVFTGGRRRSARKQAQAELQSAEAQLTAQRFSVAQSVQSAFF 160 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +A E +++ + L ++ I + + G+ ++ +++ + E+ + + E Sbjct: 161 EALRAAELMAVTQSRIALAQQGITAAERRLAVGSATRSDVLRAQLELNTARESLLQQESQ 220 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR---------- 275 Y A L + P+ PI P L +R Sbjct: 221 R------------YTAALSLGRLTGLEQPVAPSTAAPIE---PTPLTVSREELVNTLLAK 265 Query: 276 -PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGYNTHWSFGPKLYLP 333 P +R E L + A + AK+ PS+ L+ G D + G T WS L P Sbjct: 266 APSVRSAEAALTAAEAGVNSAKAQYLPSVGLSAGYNWFNEDLAITGGRTSWSVRLGLSYP 325 Query: 334 IFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IFD + + RA + AQ Q Q V + V N L + E++ ++++ AV Sbjct: 326 IFDGFLREEGVVRARTQAEVAQAQLADAQHAVRTETERVLN-LLKLAEERVVLSR--QAV 382 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERA 420 E+ ++ + + YR G ++L++L + A Sbjct: 383 EVAQEDLRVQQERYRLGATTILELLTSQTA 412 >gi|285018337|ref|YP_003376048.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283473555|emb|CBA16058.1| putative outer membrane efflux protein [Xanthomonas albilineans] Length = 489 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 98/419 (23%), Positives = 185/419 (44%), Gaps = 69/419 (16%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL--------------INIDTL 50 R + + + L GC++ P Y +P L PT +G + + +N + Sbjct: 14 RPLLCVLAIALGGCSLAPVYQRPQTALPPT---LGAATAVAATAHDTATTAVVTLNPEEQ 70 Query: 51 KWWESFN-DTSLNKLVKIALQ-----QNLTIL----QATERINAAKE-NILSVRADLFPS 99 ++ +F+ L LV AL +N +L +A RI A++ L + A Sbjct: 71 RFVHAFSPQQDLTALVTQALAHAPDFRNTVLLVQQARAQYRIERAQQLPQLGINAQGVRQ 130 Query: 100 SY--ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLN 155 SY + R+ L T + G +D +++DLFG+ + ++ L S+Y Q A+ Sbjct: 131 SYDNPATQARYGQKLYTAAVG-VDG-FELDLFGKLASLSAAAQQRYLASSYGQ-QAARGA 187 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKL------ 208 +I++++ +Y R + A Q L ++ L + Q LS L Sbjct: 188 LIAEVLRAYTVERAAAQ----AEQRLQAIAEHTSALQAIANRQHEVGLLSTDALNSQRHQ 243 Query: 209 --EAEIKSIE--SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 +A++++++ SD ++ ++ L GY A + +Q + P+ Sbjct: 244 SDQAQVRALQASSDHAAARRALQL-------LTGYNAPDNAGTLQ----SLLPDADSANT 292 Query: 265 IG---IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SF 317 + + L+ RPDI+ E +L A IG A++ +PS+ L+ S+ D+ Sbjct: 293 AAWRELDSQLLLQRPDIQQAEAELRARNADIGAARAAFFPSIQLSTSLGTASDSLNGLFM 352 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 PG + WSF P+L++PIFD G+ ++N+ A+ +++ V A +EV +AL ++ Sbjct: 353 PGSRS-WSFIPQLFMPIFDAGRNRANLDIAQLRKDGAVADYEKAVEAAFREVADALDAL 410 >gi|294053697|ref|YP_003547355.1| outer membrane efflux protein [Coraliomargarita akajimensis DSM 45221] gi|293613030|gb|ADE53185.1| outer membrane efflux protein [Coraliomargarita akajimensis DSM 45221] Length = 446 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 84/375 (22%), Positives = 167/375 (44%), Gaps = 26/375 (6%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNSTG 118 L + AL+ +L+ILQA ERI I VR+++ P S +SIS + ST Sbjct: 36 LQDAIDFALENSLSILQAKERIEEQYGLIAEVRSNVLPTISLNSSISEQDEELAGPYSTA 95 Query: 119 QLDSDWKIDL-FGQRRHIESSL-ANLDS--AYAQVDIAKLNVISKLIPSYIDARHF---- 170 +W + L Q + +L A L S A + + +L + ++ + R++ Sbjct: 96 ---DNWSVSLQVRQAIYGGGALSAGLRSQKALEKAALYELQAVVEMTIQEVKTRYYDVLL 152 Query: 171 -KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++RI + Q ++L ++ +E + +F G+ S +++ + + + + + +FR+ Sbjct: 153 QRDRIEVEEQNIELLEEQLENTQSRFDAGSVSNFDVLQSQVSLANAKPALIRARNNFRVA 212 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN----IGIPADLIRNRPDIRYQEKKL 285 V + +GY T ++ K + F L + I + ++ RP++ QE + Sbjct: 213 VAELKRSIGYVKTS--DHVTK-TPTFMGELDVMIRDYDLLSSITQALQQRPELAQQELII 269 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIAL-----THDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 S I +A++ P+L L GS + T D+ F W G + I+D Sbjct: 270 ESSKEGIDVARAGYRPTLDLVGSYSYRRSYETIDDRFDNPEGGWYVGLESTWNIWDGRAT 329 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + +A S ++ ++ E+ L EV A++ + ++V + E ++++ L+ Sbjct: 330 RGRVVQARSQVRQAELSLTESKLAVELEVRRAVSELQGSAELVEAARQVTEQAEEALRLA 389 Query: 401 MINYRQGRYSLLDIL 415 Y G +LLD L Sbjct: 390 NERYGVGSSTLLDTL 404 >gi|260914116|ref|ZP_05920589.1| NodT family efflux transporter [Pasteurella dagmatis ATCC 43325] gi|260631749|gb|EEX49927.1| NodT family efflux transporter [Pasteurella dagmatis ATCC 43325] Length = 455 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 81/408 (19%), Positives = 169/408 (41%), Gaps = 13/408 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW + D LN L+ AL+ N + +A +N A V A+L P+ + N Sbjct: 49 WWTLYQDPQLNNLIVQALENNKNLAKAAINVNKALYAANLVGANLVPAFNGKLESTAARN 108 Query: 112 L------KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KLNVISKLIPS 163 + + N +G L+ + +DL+ QR +S A + D+A +L +I+ +I + Sbjct: 109 IEHSQPSRINHSGALNVGYTLDLW-QRLADSASAAEWTYKASAQDLAAARLALINSVIAT 167 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + I + Y + ++ +F G S V+ + + + + T + Sbjct: 168 YYQLSFLNDAIYATEDSIKYYNQISQIMQNRFKLGVADSASTVQAQQSVLRASNQLLTYQ 227 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + LL ++ L+ + N + + IN +P I NRPDI+ + Sbjct: 228 TQRKIAEQTLRNLLNLKPSDPLNLNLPKILNVKN---VGINTNVPVSTIANRPDIKSAQY 284 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG-PKLYLPIFDKGKIKS 342 +L + + +P+++L S++ +T + G + LP + ++ Sbjct: 285 RLNGAFKDTKAMQKSWFPTVTLGASLSSAGTKVDNALHTPIAAGLVSVNLPFLNWNVVRW 344 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N++ +E++ + + +++++ A+ E++ + + K LQ A +K+ Sbjct: 345 NVKISEANYETARLNYEQSITKALNEIDTNYFAYQQSKSSFDNLQKAYTHNKRITQYYKN 404 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y G L D L ++ + AK QL + +Y A+ Y Sbjct: 405 RYDAGVSQLRDWLMAANTENDSQLAILNAKYQLIQQENAIYSAMAGYY 452 >gi|222834404|gb|EEE72881.1| predicted protein [Populus trichocarpa] Length = 206 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 69/143 (48%) Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 G+I+ + N F WSF P+L LPIFD G+ SN+ + Q +++T+ A Sbjct: 6 GTISTSFTNLFDSGAHVWSFAPQLVLPIFDYGRNMSNLDLSNVRKNIQIANYEKTIQTAF 65 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EV +AL + + V + + L+ + +R G S LD LD +R E Sbjct: 66 SEVADALVARGTLEDQVAGQEQQRDAEAARYELARMRFRSGVASYLDELDAQRQLFSAEQ 125 Query: 427 DLSIAKRQLAKSYVDLYIAIGSG 449 DL A++ + +DLY A+G G Sbjct: 126 DLVAARQLRLVNSIDLYRALGGG 148 >gi|242309609|ref|ZP_04808764.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523610|gb|EEQ63476.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 478 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 102/432 (23%), Positives = 180/432 (41%), Gaps = 61/432 (14%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---------- 105 F+D N+LV+IA++QN+ + A RI A+ + S +LFP A++S Sbjct: 64 FDDEVFNELVEIAIKQNMDLQIAKARILQARSQLKSAWGELFPQVSANLSATDSHSRGNS 123 Query: 106 -----HRFIPNLKTNSTGQLDSDWKIDLFG--------QRRHIESSLANLDSAYAQVDIA 152 + + N+ W++DLFG Q SL NL +A Sbjct: 124 SSLNGSSIVESSSQNTQIGATLSWEVDLFGRLNAAKNAQESFYYQSLENLSNA------- 176 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK----L 208 ++ ++ L Y R I + + + Y+ +EL+ LK G L L Sbjct: 177 QITLLGDLANLYFTLRETSLNIVLTKENILYYQDILELTRLKVENGLLDSTELFDAQDML 236 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI- 267 E ++E + TL++ + + + + P +Y + IP N + Sbjct: 237 TDEQNTLEQ-LKTLQEETKNALLVLLDIKNLPFNLVGNY----------HFVIPNNFSLQ 285 Query: 268 --PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPGYNTH 323 PAD++ RPDI+ + L V AK+ L+P LSL+ ++ L G N Sbjct: 286 TTPADVLLFRPDIKASIQSLYAQVYTKANAKASLFPILSLSADLSDVLGSSEGNAG-NLA 344 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS L PI ++ ++ N ++ QE Y+T Q+ + A+ E+ENA+ + Sbjct: 345 WSLAASLAAPILNRTQLTQNYFLQDAILQETYLTLQKNLNTALGEIENAIFNTKS----- 399 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV-----DLSIAKRQLAKS 438 T+LQ + + S + R S+ I ++E T K + +L+ +K ++ Sbjct: 400 TELQTQNNQQRLENAKSYYEFSANRRSIGLIDELEHLTNKASLNNSQKNLNTSKNSQLQA 459 Query: 439 YVDLYIAIGSGY 450 + L+ A G + Sbjct: 460 IIVLFKAFGGNF 471 >gi|310820204|ref|YP_003952562.1| outer membrane macrolide efflux protein [Stigmatella aurantiaca DW4/3-1] gi|309393276|gb|ADO70735.1| outer membrane macrolide efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 429 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 90/390 (23%), Positives = 160/390 (41%), Gaps = 47/390 (12%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------SHRFIPNLK 113 +L + ++ AL+QN ++QA I AK + S PS AS S R P+ Sbjct: 28 TLEEAIERALKQNPQVIQAAGSIRTAKASERSAFGAYLPSLSASANSTLSSSDRLNPDTG 87 Query: 114 TNSTGQLDS-------DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T +G DS W + G+RR + + A L SA AQ+ + +V + ++ Sbjct: 88 TIISGSNDSYSAGLSASWDVFTGGRRRSARKQAQAELQSAEAQLTAQRFSVAQSVQSAFF 147 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +A E +++ + L ++ I + + G+ ++ +++ + E+ + + E Sbjct: 148 EALRAAELMAVTQSRIALAQQGITAAERRLAVGSATRSDVLRAQLELNTARESLLQQESQ 207 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR---------- 275 Y A L + P+ PI P L +R Sbjct: 208 R------------YTAALSLGRLTGLEQPVAPSTAAPIE---PTPLTVSREELVNTLLAK 252 Query: 276 -PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGYNTHWSFGPKLYLP 333 P +R E L + A + AK+ PS+ L+ G D + G T WS L P Sbjct: 253 APSVRSAEAALTAAEAGVNSAKAQYLPSVGLSAGYNWFNEDLAITGGRTSWSVRLGLSYP 312 Query: 334 IFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 IFD + + RA + AQ Q Q V + V N L + E++ ++++ AV Sbjct: 313 IFDGFLREEGVVRARTQAEVAQAQLADAQHAVRTETERVLN-LLKLAEERVVLSR--QAV 369 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERA 420 E+ ++ + + YR G ++L++L + A Sbjct: 370 EVAQEDLRVQQERYRLGATTILELLTSQTA 399 >gi|294667675|ref|ZP_06732887.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602515|gb|EFF45954.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 145 Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 10/150 (6%) Query: 1 MNILRAIFSLFIV-LLAGCTVGPEYTKPHMPLLPT---QFSIGNSKNLINIDTLKWWESF 56 M+ LR + +L + L+ GC VGP+Y +P PL Q I + + + WW+ F Sbjct: 1 MSSLRTLAALVVASLVTGCAVGPDYARPEAPLQDRYIGQADIAQRRAAVPAELSTWWDGF 60 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTN 115 ND L++ V AL QNL + QA R+ A+ + + A L P+ S S R +L+T Sbjct: 61 NDPDLSRYVNAALAQNLDLAQAGARVAQARAGLSAATAALLPAGNVSGSATRAYQSLETP 120 Query: 116 STGQLDSDWKIDLFGQRRHIESSLANLDSA 145 LDS D RH ANL ++ Sbjct: 121 LGQVLDSTPNFD-----RHASVYEANLGAS 145 >gi|238797112|ref|ZP_04640614.1| outer-membrane efflux lipoprotein [Yersinia mollaretii ATCC 43969] gi|238718959|gb|EEQ10773.1| outer-membrane efflux lipoprotein [Yersinia mollaretii ATCC 43969] Length = 442 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 88/436 (20%), Positives = 185/436 (42%), Gaps = 26/436 (5%) Query: 29 MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKEN 88 M +P ++ + S ++ WWE+F+D L + L N + A ++ A+ Sbjct: 1 MLSVPDEWRVKESGGGYLKHSVHWWENFDDPQLTDNINRMLVSNNDLAAAGLKLQQARLT 60 Query: 89 ILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSL 139 ++ P S+ S++ P + N + L +++DL+G+ R E S Sbjct: 61 AGLTNTNMTPNVTLTGGGSNTRSLNENTEP--RENYSTSLGLSYELDLWGKLARAREQSA 118 Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 +++ L++I Y F +++S L + + +++ + G Sbjct: 119 WLVNATEQDRQETALSMIGTTADLYWQIAKFNQQLSYQQAALAISQDTLKMVQSRQAAGD 178 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 S++ L++ + + ++ LE+ N LL A + Y Q + N+ Sbjct: 179 ASEIELLQAQQTLLDRQNQQQNLEQQREA-ARNAMALLFNRAPD---YRQAERNSLDLQQ 234 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 +PI +P +I RPD++ E +L ++A +AK + YP+LSL ++ ++ Sbjct: 235 QVPIAESLPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPTLSLGATL-----DAGSA 289 Query: 320 YNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + W P LP ++ I +++ Q + ++ V +A+K+V++A+ Sbjct: 290 VFSQWFSNPSRTLSASGALPFLQWNTVQLTIDQSKVEVQLAAVDFRRKVYSALKDVDDAM 349 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 T +K ++L ++ +SL+ Y+ G S +LD + A E L + Sbjct: 350 TQRLSYQKQKQNQWQNLQLSQRRLSLTNSQYQAGAISFQTLLDAQDALLASETSLLELQY 409 Query: 434 QLAKSYVDLYIAIGSG 449 + + L++A+G G Sbjct: 410 NYLNATMKLWLALGGG 425 >gi|123441147|ref|YP_001005135.1| putative outer-membrane efflux lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088108|emb|CAL10896.1| putative outer-membrane efflux lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 468 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/451 (18%), Positives = 193/451 (42%), Gaps = 27/451 (5%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 G + EY +P + + P ++ + ++ ++ WW +F+D L+ + L N + Sbjct: 20 CGSLLKSEYQRPMLSV-PDEWRVKDTGGGYLHHSVHWWANFDDPQLSDSISRMLVSNNDL 78 Query: 76 LQATERINAAKENILSVRADLFP--------SSYASISHRFIPNLKTNSTGQLDSDWKID 127 A ++ A+ ++ P S+ S++ P + + + L +++D Sbjct: 79 AAAGLKLQQARLTAGLSNTNMTPNVTLTGVGSNTRSLNENTQP--RESYSTSLGLSYELD 136 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 L+G+ R E S +++ + L++I Y F +++ L + + Sbjct: 137 LWGKLARAREQSAWLVNATEQERQETALSLIGTTADLYWQIAKFNQQLGYQQAALAISQD 196 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + + + G S++ L++ + + ++ +LE+ R N LL A + Sbjct: 197 TLNIVRSRLAAGDASEIELLQAQQTLLDRQNQYQSLEQQ-REAARNAMALLFNRAPD--- 252 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 Y Q + + + I +P +I RPD++ E +L ++A +AK + YP+LSL Sbjct: 253 YRQAERQSLDLKQQVAIANSVPLQVIAQRPDVQAAEWRLRAALAGSDVAKLNFYPTLSLG 312 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQE 360 ++ ++ + W P LP ++ I +++ + + ++ Sbjct: 313 ATL-----DAGSAVFSQWFSNPSRTLSANSALPFLQWNTVQLTIDQSKLDVKLAAVDFRS 367 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V +A+K+V++A+T+ ++ ++L ++ ++L+ Y+ G S +LD + A Sbjct: 368 KVYSALKDVDDAMTARLSYQQQKQNQWQNLQLSQRRLTLTNSQYQAGAVSFQTLLDAQDA 427 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 E L + + + L++A+G G + Sbjct: 428 LLTSETSLLELQYNYLNATMKLWLALGGGVD 458 >gi|296100751|ref|YP_003610897.1| Putative RND efflux system, outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055210|gb|ADF59948.1| Putative RND efflux system, outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 442 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 94/438 (21%), Positives = 193/438 (44%), Gaps = 46/438 (10%) Query: 23 EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN-----LTILQ 77 +Y +P + L PTQ+ K N W F+D L+++++ L+ N + Sbjct: 5 DYQRPLLSL-PTQWPTMAEKGTEN----GW--RFSDPRLSRVIEQVLESNNDLAAAALTL 57 Query: 78 ATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLDSDWKIDLFGQ--- 131 R+ AA ++ D+ S AS S R P + N +G + W++DL+G+ Sbjct: 58 QQARV-AAGLTSTNISPDVRVSGAASNSKNVRRGAPP-QENYSGSVAIAWELDLWGKLAR 115 Query: 132 -RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 R E + Y ++ + + ++L Y + ++I L + ++ ++ Sbjct: 116 TREQSEWQARASEQDYRATVLSTMGLTAQL---YWRIALYNQQIRHQRDGLTVSEQTVQQ 172 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 F G +L +++ + + + ++ + TL + + ++ +L PA + +++ Sbjct: 173 VSSWFNAGKVGQLDVLQAQQALLARQNQLRTLIQQRQNTRSALALMLNRPAEQHADELRE 232 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 + Q +P+ P +I RPDI+ E +L ++A A+ YP+LSL+ S+ Sbjct: 233 LDVHQQ----VPVAQKTPLRVIAQRPDIQAAESRLRAALAGYDAARLQFYPTLSLDASL- 287 Query: 311 LTHDNSFPGYNTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 N+ + W + G L LP + + +A+ + ++ I ++ T Sbjct: 288 ----NAGSQVFSQWFRDPIRTTGAALALPFIQWNTRQLTVAQADLAIKQAAIAFRSTAYT 343 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR---YSLL----DILDI 417 A+ EV+ A+ + + ++L ++ L ++ +SL+ YR G +LL D+L+ Sbjct: 344 ALAEVDEAMENRLSADEQRSRLHQSLALSQRRLSLTESRYRAGAVDFQTLLNAQDDLLNT 403 Query: 418 ERATAKVEVDLSIAKRQL 435 E A A+ + D A QL Sbjct: 404 ENALAQTQYDYLYATLQL 421 >gi|85375037|ref|YP_459099.1| multidrug efflux system outer membrane subunit [Erythrobacter litoralis HTCC2594] gi|84788120|gb|ABC64302.1| multidrug efflux system outer membrane subunit [Erythrobacter litoralis HTCC2594] Length = 467 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 96/464 (20%), Positives = 181/464 (39%), Gaps = 33/464 (7%) Query: 10 LFIVLLAGCTVGP----EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 L + L+ C GP + T P +PL +F+ + + + D + L Sbjct: 2 LAVAALSACVAGPPPEIDTTPPPLPL---EFAF--APDAATGSAVASLLPTGDPAFQDLA 56 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HRFIPNLKTNST 117 +ALQ T+ QA RI A+ A+ P+ A+ S +F NL + Sbjct: 57 TLALQDAPTLAQAAARIEQARARAAGAGANRLPNIGANASVTGTRTNPAQFGTNLPPGIS 116 Query: 118 ---------GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN-VISKLIPSYIDA 167 L + W +DLFG+ R E + A A N +++++ S ID Sbjct: 117 IDTEQVFYGANLTASWDLDLFGRLRAQERAALARLGAATVEATAVRNALLAEIAGSVIDW 176 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 R R Q L L+ + G + V+ E+ ++ S I L Sbjct: 177 RTLAARQDALEQDLKAAASLARLAGTRERAGLSPGFDRVRAESVAEATRSRIAALATDRA 236 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLAD 287 + L G PA + L +++ + + P + +P+ L+ NRPD+ L Sbjct: 237 RIAGRLVALTGQPAQKVLDLLRQTAPD---PAQPPAPMTLPSQLLANRPDVVAAAANLEA 293 Query: 288 SVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 + A + + + +P +L+ G +A + F + + L P+ D G+I++ I Sbjct: 294 ADADLAASAARRFPQFTLSAALGLLAFDLGDLFDEDSIVGNVSGGLVAPLLDFGRIQAEI 353 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + + Q + ++ V A+ + E + + + +++ L+ Y Sbjct: 354 DASAAGKQLAFANYRNAVFTALGDAEAGYGLVAAADRQLAAASREFASAERAADLADTRY 413 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + G L +L+ RA ++IA+ Q ++ V L+ A+G Sbjct: 414 QAGLSDFLTVLEARRAADASGERVAIARGQAERARVVLWQALGG 457 >gi|325926515|ref|ZP_08187832.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] gi|325543087|gb|EGD14533.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Xanthomonas perforans 91-118] Length = 477 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 102/475 (21%), Positives = 206/475 (43%), Gaps = 56/475 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT----QFSIGNSKNLINIDTLK----------WWESFN- 57 VL GC++ P Y +P + + T Q ++ + + D + ++F Sbjct: 9 VLSVGCSLTPAYQRPVVGVPATFGSPQAALAPASGQPDADATAAVALNEQERAFLQAFAP 68 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASIS 105 D L LV+ AL N +A ++ A+ RA P+ ++ Sbjct: 69 DRDLRPLVERALAHNGDFRRAALQVEQARAQYGIARASRLPTLAVGAQQLRQHFDNPTLD 128 Query: 106 HRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPS 163 R+ +L + G ++++D FG+ + + + L SAY + D A+ +I++++ + Sbjct: 129 ARYQQDLVIANAG--IGNFEVDFFGKLQAMSEAARQRYLASAYGR-DAARGALIAEVLRA 185 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI-ESDIPTL 222 Y R + + Q+ L + L + Q ++ + +A+ + ++ + L Sbjct: 186 YTAERTTAQAL---QQLQSLDADSAALLAIAERQYQVGLIARDERDAQQRQADQAHVAAL 242 Query: 223 E--KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + + + L GY +T +Q P + + L+ RPDI+ Sbjct: 243 QGNDNHAAALRALQLLAGYDSTPVPGDLQGLIAADTP---ASAWRALDSSLLLQRPDIQQ 299 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDK 337 E +L + A IG A++ +PS++L+ S+ D F + WSF P+L LP+FD Sbjct: 300 AELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSASHGVWSFMPQLNLPLFDG 359 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G+ ++N+ A+ + + +++ + +A +EV NAL + + + + VE ++ + Sbjct: 360 GRNRANLDLAQIRKRADVVAYEQAIESAFREVANALDAHATLSQAEPRSREQVE--REQL 417 Query: 398 SLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVDLYIAI 446 L+ ++ R + R +LL ER A+ E+D RQ S + L+ A Sbjct: 418 RLARMHERVDAGLEDRSALL----AERTRIAQTELDYLDTARQRVLSRIALFQAF 468 >gi|83859335|ref|ZP_00952856.1| Outer membrane efflux protein [Oceanicaulis alexandrii HTCC2633] gi|83852782|gb|EAP90635.1| Outer membrane efflux protein [Oceanicaulis alexandrii HTCC2633] Length = 448 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 96/449 (21%), Positives = 186/449 (41%), Gaps = 23/449 (5%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +LL+ C + L P FS ++ ++ W +F D L LV AL N Sbjct: 1 MLLSACASVVTPGASDLVLAPETFSAAPAE--LDASPSDWIAAFEDPVLQVLVAEALDAN 58 Query: 73 LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQR 132 T+ A +AA+ S A P+ S+ + T + L+ +W+ D++G R Sbjct: 59 PTVASALASYDAARAGARSAGAARLPTLDGSVGYTDQEPGNTGFSTGLEVNWQADVWG-R 117 Query: 133 RHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ L + A+ D A+L++ + + S+ ++ +A ++ +E+ Sbjct: 118 LGDQARSGALTAEAARADWYGARLSIAASVARSWYALIAASQQAELAQADVEARTNQLEI 177 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL---LG-YPATEFLH 246 +F +G + + + S E+ TL R + L LG YP+ Sbjct: 178 VERRFQRGVVRSSDVRTARSALASSEA---TLASRLRAQANAARVLEVTLGRYPSASIAA 234 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + P L N G P L+ RPD+ + +LA + A+ LYP L L Sbjct: 235 GAEL------PALGALPNPGRPETLLARRPDVVAAQARLAAAGYSASAAQKALYPGLGLR 288 Query: 307 GSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 S+A + + G + PIF G++++ RAE+ A++ T Sbjct: 289 ASLADGGADIADALDFDDLVKTVVG-SISAPIFQGGRLRAERDRAEAQAEQLSANLVSTA 347 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A++E E+A+ + + V L A + +++++L Y G ++ +++D + Sbjct: 348 LTALREAEDAIEADRRLAERVDALTVASDEAREALALVQRQYASGLSTIFELIDAQTRQI 407 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + L A+ + + + L++AI ++ Sbjct: 408 SAQSALISARNERVDNRIALHLAIAGDFS 436 >gi|254490911|ref|ZP_05104093.1| outer membrane efflux protein [Methylophaga thiooxidans DMS010] gi|224463820|gb|EEF80087.1| outer membrane efflux protein [Methylophaga thiooxydans DMS010] Length = 430 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 89/403 (22%), Positives = 180/403 (44%), Gaps = 29/403 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 SL++L++ A N ++ Q + + + A P IS F + ++T Sbjct: 41 SLDQLLETAFANNPSLQQTLLTLQIRQAQLSQTDAARLPQ----ISAGFSAANEQDTTAS 96 Query: 120 LDSD----WKIDLFGQRRHIESSLANLDSAYAQV--DIAKLNVISKLIPSYIDARHFKER 173 SD W++DL+G+ + +S A+LD + A+ + S++I ++++ + Sbjct: 97 YSSDISINWQLDLWGKLK-ADSQAASLDIEQQHLLYQSARDTLASQVINAWLNLTATQHA 155 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I I + L +N ++ G + L + + ++ + +S+R Sbjct: 156 IEIEQKRLSTLTQNETFILQRYRSGIGNLEDLDNARSAVSQSKASLENNRESYRQQHRQF 215 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 LLG +E ++ + P + + + +P + RPD++ + + + Sbjct: 216 RQLLG--QSELPSIIETPTY---PEVQLSL-ADMPQQTLARRPDLQAAYIAIQAASLRTE 269 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPG----YNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 +A DL PSL L ALT S P + WS +L P+F G++++ AE Sbjct: 270 VAYKDLLPSLDLGA--ALTDSASTPHESLLASPVWSLLGQLTAPLFQGGELRAATEIAEL 327 Query: 350 SAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + Y +++ET+L AI E+E L T+++ ++ ++ A++ + S+ +YR Sbjct: 328 NTAYSYQSYRETLLTAINEIEQTLSLETTLDIQQQ---HIRQALKNSQNSLEQYQRSYRN 384 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 G +LD+L I++ T +E L Q + ++L +A+G G Sbjct: 385 GLVDILDLLAIQQQTYDLEAQLDDLIYQQLSNRINLGLALGLG 427 >gi|289668240|ref|ZP_06489315.1| outer membrane efflux protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 496 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 85/399 (21%), Positives = 173/399 (43%), Gaps = 46/399 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNL---------------INIDTLKWWESFN 57 VL GC++ P Y +P + + P F + + +N + ++F Sbjct: 28 VLSVGCSLTPAYQRPVVSV-PATFGSPQAASAPASGQPDADAAAAVTLNEQERAFLQAFA 86 Query: 58 -DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASI 104 D L LV+ AL N +A ++ A+ RA P+ ++ Sbjct: 87 PDRDLRPLVERALAHNGDFRRAALQVEQARAQYGIARASRLPTLAVGAQQLRQHFDNPTL 146 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIP 162 R+ +L + G ++++D FG+ + + + L SAY + D A+ +I++++ Sbjct: 147 DARYQQDLVIANAG--IGNFEVDFFGKLQAMSEAARQRYLASAYGR-DAARGALIAEVLR 203 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI-ESDIPT 221 +Y R + + Q+ L + L + Q ++ + +A+ + ++ + Sbjct: 204 AYTAERTTAQAL---QQLQSLDADSAALLAIAERQYQVGLIARDERDAQQRQADQAHVAA 260 Query: 222 LE--KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 L+ + + + L GY +T +Q P + + L+ RPDI+ Sbjct: 261 LQGNDNHAAALRALQLLAGYDSTPVPGDLQGLIAADTP---ASAWRALDSSLLLQRPDIQ 317 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFD 336 E +L + A IG A++ +PS++L+ S+ D F + WSF P+L LP+FD Sbjct: 318 QAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGVWSFMPQLNLPLFD 377 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 G+ ++N+ A+ + + +++ + +A +EV NAL + Sbjct: 378 GGRNRANLDLAQIRKRADVVAYEQAIESAFREVANALDA 416 >gi|330889799|gb|EGH22460.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. mori str. 301020] Length = 384 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 136/315 (43%), Gaps = 50/315 (15%) Query: 92 VRADLFPSSYASISH------------RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSL 139 RAD FP+ A + R+ +L S G SD+++D FG+ R + + Sbjct: 5 TRADRFPTIAAGVQRNRQHFDNAAADERYGQDLSIASVGV--SDFELDFFGRVRSLSEAA 62 Query: 140 AN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 + L S Y Q A+ +++++ +++ R A + D ++ + + Q Sbjct: 63 RHDYLASTYGQ-QAARSALVAEVARAWLAERLAAAVQQDAQTVHDARLMLVKAAEEQQRQ 121 Query: 198 GATS-------KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY--------PAT 242 GA S +L + + +++ SD ++ + L GY P T Sbjct: 122 GAISLDDLMAQRLDTLTAQQQVQDALSDHANASQALLL-------LTGYSAVLPATTPDT 174 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 L ++ + NL P+ + R DIR +E+ L S A IG A++ +PS Sbjct: 175 PALTAALVETPAWLSNL--------PSQRLLERFDIRQREEALKASNANIGAARAAFFPS 226 Query: 303 LSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 + L+ S+ L D+ F + W F P+L LP+FD G+ ++N+ A Q ++ Sbjct: 227 IKLSTSVGLQSDSLRTLFSNGSGTWLFSPQLNLPLFDGGRNQANLDLAHVRQQIAVAEYE 286 Query: 360 ETVLNAIKEVENALT 374 + + NA +E+ LT Sbjct: 287 KAIQNAFREMSGVLT 301 >gi|332994546|gb|AEF04601.1| RND efflux system outer membrane lipoprotein [Alteromonas sp. SN2] Length = 457 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/312 (22%), Positives = 149/312 (47%), Gaps = 38/312 (12%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +++ +I SY+D ++ ++I + L +Y+ + + ++ G S L + + Sbjct: 163 LVASIIRSYLDIITQQQLLAIEQERLRVYENSESIILKRYRTGLGSLDDLDNAKTSSATT 222 Query: 216 ESDIPTLEKSFRMNVHNISTLLG--------YPA-TEFLHYMQKQSNNFQPNLYIPINIG 266 + I E + ++ LLG +P+ TEF P++ P+ + Sbjct: 223 RASIALYENTISAAKRTLAVLLGRQDQTLSDFPSVTEF------------PDVLEPL-LA 269 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NT 322 +P + RPD++ + S A + +A L PS++L S LT + P N Sbjct: 270 LPEQDLARRPDLQAAYYGIKASEANVKVAYKALLPSINL--SAGLTDTGTSPSQSLFTNP 327 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ ++ P+F G +++ I AE +A + ++ET+L A++EV++AL +++K Sbjct: 328 LWNLLGQVTAPLFQGGALRAQIDDAELTALNSWWEYRETLLTAVQEVQDAL----DNEKA 383 Query: 383 VTKLQHAVEL-HKKSMSLSMI---NYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAK 437 +++ Q+ + ++ ++S + YRQG +LD+L + T ++ + + QL+ Sbjct: 384 LSQRQYYTNIAYQNALSSADTFSGQYRQGLVDILDLLSVYDTTFNLQAQRVELQNSQLSN 443 Query: 438 SYVDLYIAIGSG 449 +DL +A+G G Sbjct: 444 R-IDLGLALGLG 454 >gi|270158689|ref|ZP_06187346.1| outer membrane efflux domain protein [Legionella longbeachae D-4968] gi|269990714|gb|EEZ96968.1| outer membrane efflux domain protein [Legionella longbeachae D-4968] Length = 456 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 104/469 (22%), Positives = 196/469 (41%), Gaps = 45/469 (9%) Query: 4 LRAIFSLFIVL----LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 +R++ +L I++ L C + ++P +P ++ L + WWE F D Sbjct: 1 MRSLATLIILVMTSALVACMPSAKNSQPSSIYIPAYLKASSNDALNQLPYQAWWEDFRDP 60 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-- 117 LN+ V+ AL+ N + A I ++ + ++R + P + P L Sbjct: 61 LLNQFVEKALRYNNNVTIAKRSIRVSQAELQTIRLNWLPGLNVLMGFSQDPALGNPGVFY 120 Query: 118 GQLDSDWK--IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 G L S ++ + L+ Q++ E L + Y V +L VI ++ SY + ++ Sbjct: 121 GVLPSYYQNFVALYFQQKKAEFVLKRAKAYYLGV---RLTVIGEVTSSYFSLLAWNHQLE 177 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + +QI KK + + QG + L L+ + ++++S+ + + + + + Sbjct: 178 LLNQIEQDNKKLLVSLKIAKNQGLANNLQLLTVTSQLQSVLGLRQQAQNNIIASENALHY 237 Query: 236 LLGYPATEFLHYMQKQSNNF--QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+ P + K +F P+ +P+N I +I RPD+ L + + + Sbjct: 238 LINEPPGKI-----KSGPSFIKVPSKEVPLN-KINTQVILRRPDVMVALTSLFAACSGVN 291 Query: 294 IAKSDLYPSL---------SLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 IA+S L P+L SLNG+ + TH + ++ P L+ I I N Sbjct: 292 IAESQLLPALTLDYFWGKASLNGTFNSPTHSAPYGDIYATFNLSPSLFGQILTSKAI-FN 350 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH---AVELHKKSMSLS 400 AE + + NA++ + N SI ++K++ K A+E KK L Sbjct: 351 KSLAE---------YNNVIQNALRLIAN---SIAANQKLMAKYHEDALALEALKKRYHLQ 398 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y +G S D+L + L+I+K + S + LY + +G Sbjct: 399 QDLYAKGLISHNDLLYSRIEINQQAYQLTISKLEQLISVIRLYEELAAG 447 >gi|146312380|ref|YP_001177454.1| multidrug resistance outer membrane protein MdtQ [Enterobacter sp. 638] gi|145319256|gb|ABP61403.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter sp. 638] Length = 501 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 89/445 (20%), Positives = 187/445 (42%), Gaps = 72/445 (16%) Query: 52 WWESFNDTSLNKLVKIA---------LQQNLTILQATERINA------------AKENIL 90 WW+++ND L+ L+ A +Q + + +A ++ A A+ + Sbjct: 82 WWKAYNDPQLDSLIAQAQADAPDMQIARQRIALAEAQAKLAASADGPQLDFSANAERQKM 141 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQV 149 S + P + + TN T L + W +DL+G+ R +E+ + +++ A++ Sbjct: 142 SAEGLMGPFATTDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRDRVEARIGKVNAQKAEM 201 Query: 150 DIAKLNVISKLIPSYID-----------ARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 + + + S + Y + A +E+ +I +LY+ I S +G Sbjct: 202 EQTRQLLASSVARLYWEWQTQNAMGHVLAAIKQEQGNIIGADRELYQNGITSS----VEG 257 Query: 199 ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + ++ K + + + + T+E + H S L +P+ Sbjct: 258 VETDINSSKTDEHLAEVNGKMKTIEARLQALTHASSIAL------------------KPH 299 Query: 259 LYIPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 + +PA +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 300 ALPTVEASLPATLGYELLARRPDLQEAHWYIEASLSEVDAAKAAYYPDVNLMAFLQQDAL 359 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F L LPIFD G++ +N+ A++ + + + V++A+ +VE+ Sbjct: 360 HLSDLFRSSAQQMGVTAGLTLPIFDSGRLNANLDIAQAQSNLSVANYNKAVIDAVNQVEH 419 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSI 430 A + + + ++ K Q + H ++ + ++ Q R++ I + AK+ + I Sbjct: 420 AASEV---ETLMHKNQQ--QQHVEADAARVVALAQARFNAGIIAGSRVSEAKIPALQEQI 474 Query: 431 AKRQLAKSYVD----LYIAIGSGYN 451 A L YVD L A+G GY+ Sbjct: 475 AGLALKGQYVDATLQLTAALGGGYH 499 >gi|238787895|ref|ZP_04631691.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia frederiksenii ATCC 33641] gi|238723843|gb|EEQ15487.1| RND efflux system, outer membrane lipoprotein, NodT family [Yersinia frederiksenii ATCC 33641] Length = 477 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 101/487 (20%), Positives = 192/487 (39%), Gaps = 69/487 (14%) Query: 10 LFIV-LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 +F+V LLAGC L Q + K + +WW D L+ L+ + Sbjct: 1 MFVVFLLAGCASSDNIAPQSQMLENQQLQLAQPKVSSLALSPQWWRVLEDPQLDALMSQS 60 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-SYASISHR----------FI------PN 111 L + ++ QA R+ A+ + A P+ A+ S R F+ P Sbjct: 61 LHTSPSLKQAAARVREAQSVMGQADAANGPNIDLAASSTREKIAQNTLQPFLQAYPSKPL 120 Query: 112 LKTNSTGQLDSDWKIDLFGQRRH---------------IESSLANLDSAYAQV--DIAKL 154 +T +T L+ ++ D +G+ R+ + + L S+ A V + Sbjct: 121 YETANTLGLNLSYEFDWWGKYRNRVNAANAQVNAARAEQQQAALTLTSSVASVYYQLQSN 180 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + K++ +D ++ +Y IE+ Q T+K +++L+++ + Sbjct: 181 FAVQKVLQQEVDNNDRLAQLRTKQYQAGIY--GIEIPQQTQAQADTAKQQIIQLQSQGEQ 238 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + L NI + PA L + + DL+ Sbjct: 239 LKHQLAALTGQGPSGTQNIRPV-PLPAISQLAPKGE----------------LTTDLLGQ 281 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--------WSF 326 RPDI Q + + ++ A+ + YPSLS+ G + N F G N + W+F Sbjct: 282 RPDITAQRQLVESYDQRVKAARKEFYPSLSITGFAGFSTTN-FQGTNPNLLEAASQAWNF 340 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P + LPIF G ++S + + E ++ +T+LNA++E +A+T + + + Sbjct: 341 APAISLPIFHAGALRSKLGEESALYDESVESYNQTILNAVQETADAITIQQSSQLQLQQA 400 Query: 387 QHAVELHKKSMSLSMINYRQ---GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 A + +K +++ Y+ GR LL + E+ A L ++ + L Sbjct: 401 TSASQSMQKVYNVASARYQAGIIGRDELLISQSQYLQQQQSELS---ASNNLLQAKIGLI 457 Query: 444 IAIGSGY 450 ++G GY Sbjct: 458 RSLGGGY 464 >gi|167815523|ref|ZP_02447203.1| Outer membrane protein [Burkholderia pseudomallei 91] Length = 203 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 11/185 (5%) Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 S+ ++ ++E+ +P L + + H ++ LLG +N +L Sbjct: 1 ASRTDMLNTRQSAAALEASLPALRQQAQSARHALAVLLGRTPDA------APANLALADL 54 Query: 260 YIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHD 314 ++P + + +P+ L++ RPDIR E L + A++G+A + ++P LSL+ S+ Sbjct: 55 HLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMGHAGFKWP 114 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 G WS G L P+F G + + R A +S +++TVL A ++V + L Sbjct: 115 AMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADKLA 174 Query: 375 SINED 379 ++ D Sbjct: 175 ALEND 179 >gi|148554065|ref|YP_001261647.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gi|148499255|gb|ABQ67509.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 488 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 95/440 (21%), Positives = 186/440 (42%), Gaps = 37/440 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFNDTSLN 62 A+ L I L A ++ +P + P + G S + + WW+++ D L Sbjct: 13 AVVGLPIALAACASIPDLGARPEL-RTPASVAAGQSLGGRTDADWPADGWWQAYGDPQLA 71 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISHRFI 109 L++ L+++ A R A+ + A L PS A I +F+ Sbjct: 72 GLIEEGLRESPDAAAAAARFRQARGMAQAAGAPLLPSVGAGASAGLEKQSYNVGIPAQFV 131 Query: 110 PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVISKLIPSYID 166 P GQ +D + +DL+G+ R ++ + A + D A+L + + + +Y D Sbjct: 132 PK-GWQDVGQASIDLSFDLDLWGRNRAALAAATSEAEAARIEQDQARLMLATGIASAYAD 190 Query: 167 -ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 AR ER +A + +L +L + G ++ L + +A + + +D+ +++ Sbjct: 191 LARLHAERDVLAAAV-ELRAATRKLVGDRVRNGLDTRAELKQADAAVPAARADLAAADEA 249 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQ 281 + + I+ L+G L + P G+PA +LI RPDI Sbjct: 250 IALVRNQIAALVGAGPDRGLGIARPALAALHPP-------GLPAQVTTELIGRRPDIAAA 302 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + + ++I +A++D +P++ L G +L D +T+ + P + LPIF G Sbjct: 303 RAQAEAAASRIKVARADFFPAIRLGALVGVRSLGLDQLTDSGSTYGNVTPAVSLPIFRGG 362 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + R A E + V+ A +EV +A+TS + + + A+ +++ + Sbjct: 363 ALSGQYRGARGRYDEAVALYNRAVIAAYREVADAVTSQRAATDRLAQSRQALADSEEAYA 422 Query: 399 LSMINYRQGRYSLLDILDIE 418 ++ Y G + L++L E Sbjct: 423 IARKRYEGGLSTYLNVLSSE 442 >gi|206564171|ref|YP_002234934.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] gi|198040211|emb|CAR56194.1| outer membrane efflux protein [Burkholderia cenocepacia J2315] Length = 622 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 93/437 (21%), Positives = 188/437 (43%), Gaps = 49/437 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L+ LV A Q N L + QA RI A+ L ++ A+IS + Sbjct: 71 WVKQLQDPQLDDLVAEASQHNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATISRARM 130 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ + G Q+ D +++DL+G+ R SL +L D+A Sbjct: 131 PKPGDIADVTAGGYRVPVQIFGDPNVSPSSIFVGLNYQLDLWGKNRAATKSLMSLRDAAG 190 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL-------KFTQGA 199 + + +L + ++ Y ++ A+ + DL ++ +++S + +G Sbjct: 191 VEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQKLKISQRVTAVLRERTARGL 243 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 + + + I ++ ++ + L G L + + F Sbjct: 244 DNAYDASDASIKRSRLLEQIALNDEQIKLAQLQLGVLSGRGPERGLALQRPRVGAFAGG- 302 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNS 316 +P + PADL+ RPDI ++ + A ++ YP + +L G ALT + Sbjct: 303 AVPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPASL 360 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + S GP + LPIFD+G++K+ + + A + +TV +A+ +V +TS+ Sbjct: 361 FSRDSLAGSVGPAISLPIFDRGRLKAKLGADVAQADVAIGLYNKTVDDALGQVAQLVTSL 420 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQ 434 + +V + Q AV +K + ++ +R+G +D+ D+ + ++ + K++ Sbjct: 421 QTSQTLVAQQQDAVAAAQKIVQIAADRHRRGVLMQKDVDVADLTLIDERTQMIALLGKQR 480 Query: 435 LAKSYVDLYIAIGSGYN 451 + + V L A+G G++ Sbjct: 481 MLR--VGLIGALGGGFD 495 >gi|78048519|ref|YP_364694.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036949|emb|CAJ24646.1| outer membrane efflux protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 489 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 302 LLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGVWSFM 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LP+FD G+ ++N+ A+ + + +++ + +A +EV NAL + + + + Sbjct: 362 PQLNLPLFDGGRNRANLDLAQIRKRADVVAYEQAIESAFREVANALDAHATLSQAEPRSR 421 Query: 388 HAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVD 441 VE ++ + L+ ++ R + R +LL ER A+ E+D RQ S + Sbjct: 422 EQVE--REQLRLARMHERVDAGLEDRSALL----AERTRIAQAELDYLDTARQRVLSRIA 475 Query: 442 LYIAI 446 L+ A Sbjct: 476 LFQAF 480 >gi|255019593|ref|ZP_05291675.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus caldus ATCC 51756] gi|254970970|gb|EET28450.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus caldus ATCC 51756] Length = 403 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/372 (19%), Positives = 166/372 (44%), Gaps = 50/372 (13%) Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLI 161 + HRF + +TG + +D +G ++++L ++ A+ + + + L+ Sbjct: 58 GLGHRFY---DSGTTG-IGLRQALDFWGYHHDLVQAALGEAAASQAREADTRRLLAATLV 113 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y+D ++ ++ HQ L ++ + L+ + + G S+L +LE +++ I Sbjct: 114 NEYLDWGGAEKIAALLHQQERLAQEQLRLARQRRSLGLDSQLPPQRLERQLQGI------ 167 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA------------ 269 +E+ + + L QS P+ +PI+ +P+ Sbjct: 168 IERRIQWQKMATDSRLAL----------AQSAGLGPD-QLPIHAPLPSRETPVIVPAQIH 216 Query: 270 -DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSF--PGYNTHW 324 DL +RPD++ + S A+ A++ YP++S + + L H + PG + W Sbjct: 217 LDLFAHRPDVQAALELAKASEAQTKAAQAAFYPNISFSALLDLDSAHLATLFTPG-SIAW 275 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 FGP ++LP+F G + +++ AE+ ++ +++T+L A+++ AL +++ ++ + Sbjct: 276 QFGPAVHLPLFQSGALHAHLHGAEAQQKDAVALYEQTLLAAVRQALEALNDLDKSQQALA 335 Query: 385 KLQHAVELHKKSMSLSMINYR---QGR--YSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 A S+ L+ + +GR Y + ++R+ + + +LS K++ Sbjct: 336 SANIAWNSGHTSLKLTSVRVGLGLEGRSPYIAEESAQLQRSIQRTQAELSA-----WKAW 390 Query: 440 VDLYIAIGSGYN 451 A+G GY Sbjct: 391 SAWQTALGGGYG 402 >gi|294665488|ref|ZP_06730772.1| outer membrane channel protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604742|gb|EFF48109.1| outer membrane channel protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 489 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 84/408 (20%), Positives = 178/408 (43%), Gaps = 52/408 (12%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSI------------GNSKNLINIDTLK--W 52 + ++ L AGC++ P Y +P + + T S+ N+ + ++ + + Sbjct: 15 LVAVSAALSAGCSLTPAYQRPVVSVPATFGSLQAASPPASGEPDANAAPAVALNEQERAF 74 Query: 53 WESFN-DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 ++F D L LV+ AL N +A ++ A+ +A P+ Sbjct: 75 LQAFAPDRDLRPLVERALAHNGDFRRAALQVEQARAQYGIAQASRLPTLAVGAQQLRQHF 134 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVI 157 ++ R+ +L ++ G ++++D FG+ + + + L S Y + D A+ +I Sbjct: 135 DNPTLDARYQQDLVISNAG--IGNFEVDFFGKLQAMSEAARQRYLASTYGR-DAARGALI 191 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI-E 216 ++++ +Y R + + Q+ L + L + Q ++ + +A+ + + Sbjct: 192 AEVLRAYTAERTTAQAL---QQLQSLDADSAALLAVAERQYQVGLIARDERDAQRRQADQ 248 Query: 217 SDIPTLE--KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG----IPAD 270 + + L+ + V + L GY +T + Q + G + + Sbjct: 249 AHVAALQGNDNHAAAVRALQLLAGYDSTPV-------PGDLQGLIAADTPAGAWRALDSS 301 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 302 LLLQRPDIQQAELELRAADADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGVWSFM 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 P+L LP+FD G+ ++N+ A + +++ + +A +EV NAL + Sbjct: 362 PQLNLPLFDGGRNRANLDLAHVRERADVAAYEQAIESAFREVANALDA 409 >gi|21243529|ref|NP_643111.1| outer membrane channel protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109093|gb|AAM37647.1| outer membrane channel protein [Xanthomonas axonopodis pv. citri str. 306] Length = 489 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 15/185 (8%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFG 327 L+ RPDI+ E +L + A IG A++ +PS++L+ S+ D F + WSF Sbjct: 302 LLLQRPDIQQAELELRAANADIGAARAAFFPSITLSSSVGTASDGLNGLFSAGHGVWSFM 361 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LP+FD G+ ++N+ A+ + + +++ + A +EV NAL + + + + Sbjct: 362 PQLNLPLFDGGRNRANLDLAQVRERADVVAYEQAIEAAFREVANALDAHATLSQAEPRSR 421 Query: 388 HAVELHKKSMSLSMINYR-----QGRYSLLDILDIERAT-AKVEVDLSIAKRQLAKSYVD 441 VE ++ + L+ ++ R + R +LL ER A+ E+D RQ S + Sbjct: 422 EQVE--REQLRLARMHERVDAGLEDRSALL----AERTRIAQTELDYLDTARQRVLSRIA 475 Query: 442 LYIAI 446 L+ A Sbjct: 476 LFQAF 480 >gi|330901968|gb|EGH33303.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 341 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/321 (21%), Positives = 152/321 (47%), Gaps = 17/321 (5%) Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 +S+L L ++ +L +++ + Y +E+ IA L + + L ++ Sbjct: 8 DSALQGLRASQFDQATVELTLLANVADRYAQTLAAREQGRIAELNLTNAQDVLRLVQTRY 67 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G+ + L L + + + + + ++P +++ + ++ LLG P + LH + + Sbjct: 68 ESGSATALELAQQKNLVATQQRELPRVQQLANEQLITLAALLGQP-VQNLHLADQPFDTL 126 Query: 256 QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN 315 + I G+P++L+ RPD+ E +LA + A + +A++ + L+L+ + + Sbjct: 127 N---WPDIGPGLPSELLTRRPDLAKAEAELAAAQANVTVARAAMLSKLTLSARLGTENTR 183 Query: 316 SFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + + S L PIF+ G++ + +A + +E T++ ++N+ +VE AL Sbjct: 184 AEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATARQEELLETYRGAIINSFADVEKALN 243 Query: 375 SINE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYSLLDILDIERA---TAKVEVDL 428 SI D++ + H EL + + ++ Y++G LL +L+ +R V V L Sbjct: 244 SIRGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAEDLLTVLETQRTLYLAQDVSVQL 300 Query: 429 SIAKRQLAKSYVDLYIAIGSG 449 +A+ Q + + LY A+G G Sbjct: 301 RLARLQ---ASIALYKALGGG 318 >gi|313110220|ref|ZP_07796116.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] gi|310882618|gb|EFQ41212.1| putative outer membrane protein precursor [Pseudomonas aeruginosa 39016] Length = 205 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 17/196 (8%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH 323 +PA+L+ R DI ++ + I AK++ YP+L+L G AL + + Sbjct: 2 LPAELLGRRADIVAARWRVEAARRNIDSAKTEFYPNLNLGAMAGLAALHTSDVLQAPSRF 61 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + P + LPIFD G+ ++N+ ++ + +T++ A+ EV + L + ++ V Sbjct: 62 FQVAPAISLPIFDGGRRRANLAERDADYDLAVGQYNKTLVQALGEVSDNLGKLRSLEQQV 121 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYV 440 + A ++ + + L+M Y +G S LD L +++ L +A+RQLA + Sbjct: 122 IDQRQARDIARSNFDLAMRRYGEGVGSYLDALSVQQ-------QLLVAERQLASLESQQI 174 Query: 441 DLYI----AIGSGYNP 452 DL + A+G G+ P Sbjct: 175 DLSVQLVQALGGGFQP 190 >gi|9911073|sp|P24126|FUSA_BURCE RecName: Full=Fusaric acid resistance protein fusA; Flags: Precursor Length = 530 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/319 (21%), Positives = 134/319 (42%), Gaps = 35/319 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + A R+ A+ R+ P ++S + Sbjct: 62 WWRAYRDPQLDTWIAAAQAGXPDARGRRGRVREAQAMARVARSAELPQINGNLSLMRQHW 121 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ ++ E +L + A AKL + Sbjct: 122 PDNVYYGPGPLANTDTWNNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLEL 181 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ + +AH+ + + +L+ + G ++L + + E+ + E Sbjct: 182 EVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLEVSQAESTLPDYE 241 Query: 217 SDIPTLEKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGI----PAD 270 I + E++ ++ H ++ L G A + + +P L + G+ PAD Sbjct: 242 RQIDSYEEAIQLARHQLAALAGKGPGAGDAIK---------RPRLSLDAPAGLPSAMPAD 292 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHD--NSFPGYNTHWS 325 L+ RPD+ + I +AK+ YP++ L G +T + N W+ Sbjct: 293 LLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWT 352 Query: 326 FGPKLYLPIFDKGKIKSNI 344 GP L LPIF+ G++++ + Sbjct: 353 AGPALSLPIFEGGRLRAQL 371 >gi|330879508|gb|EGH13657.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 315 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/265 (18%), Positives = 118/265 (44%), Gaps = 8/265 (3%) Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 +L+ + G + + + E + I L+++ ++ + ++ L G E + Sbjct: 36 DLAQRRLKGGIGTHFEISQAETPLPEAHRQIDALQEAIALSRNQLAALAGKGPGEG-AAL 94 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 Q+ + + L +P +PA+L+ RPD+ ++A I +A + YP++ L GS Sbjct: 95 QRPTLSLHTELKMPS--ALPAELLGRRPDVVAARWQVAAQARGIDVAHAGFYPNVDLVGS 152 Query: 309 IALTHDNS-----FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 ++ G + GP + LPIFD G++++ + +A ++ + + +T++ Sbjct: 153 LSYMATGGGMLEFLTGSKLGYKVGPAISLPIFDGGRLRAELGQASAAYDQAVAHYNQTLV 212 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A+K + + L K +V +K+ +++I +++G L++L+ + Sbjct: 213 MALKSISDQLIRRASMDKQQAFAAESVASAQKTYDIALIAWQRGLTDYLNVLNARTQLFR 272 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 + + +Y L +A+G Sbjct: 273 QQQIQQQVEAARLNAYAGLLVALGG 297 >gi|227539621|ref|ZP_03969670.1| AcrB/AcrD family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240534|gb|EEI90549.1| AcrB/AcrD family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33300] Length = 1521 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 104/494 (21%), Positives = 218/494 (44%), Gaps = 79/494 (15%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVKI 67 L +VL + C V + + + +P++ + ++ + + I L W F D +L +L+ Sbjct: 1054 LILVLFSACKVRSDVRESY---IPSKIPVADTAAIDSAFIHNLHWNTFFKDENLRQLIDT 1110 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------------FIPNLK 113 AL ++ + +A ERI +K + + + P A+I F NL Sbjct: 1111 ALVRSPDLGEALERIEFSKTKLRLRKGEQLPQVDAAIEGSLSRFGDYTIDGTGIFDQNLS 1170 Query: 114 TNSTGQ-------------LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 N +G+ + S W++D++G+ R+++ ++L ++Y + + +++ Sbjct: 1171 DNISGKKVIPNPVPDYFIGIRSVWELDIWGKLRNLKNAALHEYLASYEGRKLVQSELVTS 1230 Query: 160 LIPSYIDARHF-KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA-------- 210 + Y D E+I+I I L K++E+ + G + LS+ + +A Sbjct: 1231 IATRYYDLVALDAEQIAIQENI-KLQSKSLEIMEVMKKAGTANSLSVSQFQAALLQAKAR 1289 Query: 211 ------EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 +I+ IE++I L F + + L + + F +N +P Sbjct: 1290 EKKGLQQIREIENEINYLIGRFNGEITR-TPLTAHDSPVF--------SNIKPE------ 1334 Query: 265 IGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF------ 317 AD L+ +RPDIR +L + + AK++LYPSL L + L NSF Sbjct: 1335 ---HADQLLASRPDIRQAGLQLIAAGLETDAAKANLYPSLVLAPQLGL---NSFRIEKLL 1388 Query: 318 -PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + G L PI ++ + + + +++ Q+ +++TVL A +E+ + L Sbjct: 1389 SSSSLAYSLIG-GLSGPILNRTTLNATYDQYKANYGIQFYQYEKTVLKAWQELYSQLEVQ 1447 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 + ++ L V++ ++ +S + GR + LDIL +++ + +D ++++ Sbjct: 1448 DYARERQDMLSKQVDVLNEAAQVSNDLFIAGRATYLDILSAQKSALEASIDKIESRKENI 1507 Query: 437 KSYVDLYIAIGSGY 450 +++Y A+G G+ Sbjct: 1508 LIQLNIYKALGGGW 1521 >gi|218676368|ref|YP_002395187.1| putative outer membrane transport protein [Vibrio splendidus LGP32] gi|218324636|emb|CAV26200.1| putative outer membrane transport protein [Vibrio splendidus LGP32] Length = 455 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 91/412 (22%), Positives = 184/412 (44%), Gaps = 37/412 (8%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF--PS--SYASISHRFIPN 111 FN+ +L LV+ AL N + + R+ A+ +L+ ++D + PS + S + Sbjct: 62 FNNQALADLVQEALTNNHDLHKTALRLKQAE--LLADQSDQYLQPSLNTDFQASRQKTSQ 119 Query: 112 LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYIDARH 169 ++ + L+ W+ D++G R +S AN Q+D A+ ++ +++I +++D + Sbjct: 120 IQNSHKLSLNLSWEFDVWG-RLADTASAANAKQQATQLDYVYAQNSLAARVIETWLDVAY 178 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 I + + L + + G + L A + + + E+ + Sbjct: 179 RARVIGVEQRWLQSLSNTENIVLEQVLDGFKEQADLDTARAATSRVRASLAAKEQDQLIA 238 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDI--RYQEKKLA 286 + ++TL G + + F P + P + +P ++I +RPD+ YQ+ A Sbjct: 239 IRGLNTLRGKSDNQLNRMI------FTIPEVEAP-PLRLPGEMIGSRPDLLAAYQQVLAA 291 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKGKIKS 342 D A +A DL P +L+ S+ S P + + W+ + P+ D+ +++ Sbjct: 292 DKSA--AVAYKDLLPKFTLSASV--YRSGSTPNHLIDNPSLWNLVGGISAPLLDQSSLQT 347 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH-----AVELHKKSM 397 + A+ A+E ++ +Q+ +L AI EV NAL DK+ K Q A K SM Sbjct: 348 QAKIAQLQAEESFVDYQKKLLVAINEVGNAL-----DKEFYLKQQEQHYRDAFTFSKASM 402 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 Y++G +L +L +++ + ++ L +R + + L +A+G G Sbjct: 403 KNYQNLYQEGASDVLALLIAQQSIYQSKIQLLNTQRTRLSNRITLGLALGMG 454 >gi|78186608|ref|YP_374651.1| outer membrane efflux protein, putative [Chlorobium luteolum DSM 273] gi|78166510|gb|ABB23608.1| outer membrane efflux protein, putative [Chlorobium luteolum DSM 273] Length = 463 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 74/347 (21%), Positives = 155/347 (44%), Gaps = 38/347 (10%) Query: 96 LFPSSYASISHR---FIP-NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLD---SAYAQ 148 FPSS+ ++ F P N+ +++G+ D + LF A + SA A Sbjct: 93 FFPSSFGALEGNQSGFTPINISADNSGKATLDLQQSLFNGTAFAGIRGAGIVKKISAEAY 152 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D A+ V+S + +Y DA ++++ + ++ +++ + + F QG + + +K Sbjct: 153 RD-AEAAVVSDIRMAYFDALISRDQLQLVQDSIERWEEARKDTGAMFRQGVAADIDTLKA 211 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGI 267 ++++ D+ E + + +G PA +L +P+ Sbjct: 212 YLSVENLRPDLIQAENRVLNTMTRLKNAMGLDPAVPL---------ALSDSLSVPVAT-Y 261 Query: 268 PADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-------- 312 PAD +R RPD+R E ++ KI A+++ P+L+ G +A Sbjct: 262 PADAAIAWREALRARPDVRQLELQVEAEREKISAARAERLPTLTAFGELASQSAFNDDTD 321 Query: 313 -HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D+++P S G ++ LPIF +I S + +A+ + + ++ N + E+E Sbjct: 322 IQDSAWP---VSSSVGLQVSLPIFTGYRISSRVEQAKIARFQSMARLEDLKANVLAELEV 378 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 L+++ E +K + + + ++S +S++ +R+G S L++ D E Sbjct: 379 RLSNMREARKRIDVQSKTIGMAERSYRISLLRFREGVGSRLELTDAE 425 >gi|332535143|ref|ZP_08410952.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas haloplanktis ANT/505] gi|332035413|gb|EGI71912.1| RND efflux system, outer membrane lipoprotein, NodT family [Pseudoalteromonas haloplanktis ANT/505] Length = 453 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 102/462 (22%), Positives = 199/462 (43%), Gaps = 57/462 (12%) Query: 15 LAGCTVGPEYT--------KPHMPLLPTQFS------IGNSKNLINIDTLKWWESFNDTS 60 LA C+ P YT K H TQ + I + ++ +D+L N+ S Sbjct: 19 LAACSSQPSYTGNSTEQSLKQHANWQYTQSNAQHVNYITDLVDIEGLDSLIEQAVTNNPS 78 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 N+ V +AL+ L +R A SV AD + ++ +L + Sbjct: 79 FNQ-VHVALK-----LAYAQRDVTAASQWFSVDADFDAQRNETTGTQYSSSLGVS----- 127 Query: 121 DSDWKIDLFGQRRHIESSLANLD----SAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 W+ D++ + I ++A D S A AK +++ ++ +Y++ ++ + I Sbjct: 128 ---WEADVW---QKIADNVAAQDMTIASNQATYQGAKDTLVASVMRTYLNIILQQDLLDI 181 Query: 177 AHQILDLYKKNIELSHLKFTQGA-------TSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 Q L + + N + ++ G T++ S A I + I +++ M Sbjct: 182 EQQRLVVLQNNEQSIVERYQYGLGDLEALDTARTSTASTRATIADYQEQIAKAKRAL-ML 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + L P+T L P++ P++ DL R RPD++ + Sbjct: 241 IVGTDKLQNLPSTLTL-----------PSVIEPLSKLPEQDLAR-RPDLQSAYYNIQAKH 288 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRA 347 + ++ +L PS+SL+ S++ T WS L P+F+ G +++ + A Sbjct: 289 YLVDVSYKELLPSISLSASLSDLASTPSQALLTSPVWSLLGSLSAPLFEGGALRAQVDIA 348 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +A++ + +Q+T+L+A+ EVENAL + ++ +A+ ++S S Y+QG Sbjct: 349 KLNAEQAFWQYQDTLLSAVNEVENALGQEQSLTEQQLQISNALASAQRSFSNYQSKYQQG 408 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 +LD+L +++ ++ LS L + +DL +A+G G Sbjct: 409 LVDILDLLTVQQKVYDLQAQLSQINYTLLTNRIDLGLALGLG 450 >gi|255606657|ref|XP_002538608.1| Fusaric acid resistance protein fusA precursor, putative [Ricinus communis] gi|223511374|gb|EEF23775.1| Fusaric acid resistance protein fusA precursor, putative [Ricinus communis] Length = 311 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 50/310 (16%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNS---KNLINIDTLKWWESFN 57 + + R L +LL GC PL + +G + + I T WW+++ Sbjct: 14 LRVSRWGVWLLALLLNGCISSKGIIPASQPLAQDKLVLGKTIEDASAIAWPTEHWWQAYQ 73 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------FI 109 D L++LV+ +L + + +AT RI A P+ +S FI Sbjct: 74 DAQLDRLVEKSLHDHPDLKKATARIALTTAMAEQAHAATLPNVGGKVSSSRERFTELSFI 133 Query: 110 P-----NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAY---AQVDIAKLNVISKLI 161 P N+ +D + +DL+ Q++ + LA LD A+ A++ K+ + + ++ Sbjct: 134 PKPWAGRFNWNNQATVDMSYNLDLWKQQK--SAWLAALDEAHVSEAEMQQVKIELTAAMV 191 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSH-------LKFTQGATSKLSLVKLEAEIKS 214 SYI R++ +Q DL + ++ H G ++LSL +LEA + + Sbjct: 192 KSYI-------RLAAEYQWRDLAAEELDDVHHEIAIAKKALAAGLNTQLSLSRLEATLPA 244 Query: 215 IESDIPTLEKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINIG----IP 268 ++ + +E + + I+ L G A E + +P L++ +IG +P Sbjct: 245 AQNKLAQIELHLTLLKNQIAALSGEGPGAGEGI---------ARPGLHLSASIGLPDQLP 295 Query: 269 ADLIRNRPDI 278 A+LI RPDI Sbjct: 296 ANLIGRRPDI 305 >gi|300773769|ref|ZP_07083638.1| AcrB/AcrD family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] gi|300759940|gb|EFK56767.1| AcrB/AcrD family multidrug resistance protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1521 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 105/494 (21%), Positives = 216/494 (43%), Gaps = 79/494 (15%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN--IDTLKWWESFNDTSLNKLVKI 67 L +VL + C V + + +P++ + ++ + + I L W F D +L +L+ Sbjct: 1054 LILVLFSACKVRSDVRDSY---IPSKIPVADTAAIDSAFIHNLHWNTFFKDENLKQLIDT 1110 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--------------FIPNLK 113 AL ++ + +A ERI +K + + + P A I F NL Sbjct: 1111 ALVRSPDLGEALERIEFSKTKLRLRKGEQLPQVDAVIEGSLSRFGDYTIDGTGIFDQNLS 1170 Query: 114 TNSTGQ-------------LDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISK 159 N +G+ + S W++D++G+ R+++ ++L ++Y + + +++ Sbjct: 1171 DNISGKKVIPNPVPDYFIGIRSVWELDIWGKLRNLKNAALHEYLASYEGRKLVQSELVTS 1230 Query: 160 LIPSYIDARHF-KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA-------- 210 + Y D E+I+I I L K++E+ + G + LS+ + +A Sbjct: 1231 IATRYYDLVALDAEQIAIQENI-KLQSKSLEIMEVMKKAGTANSLSVSQFQAALLQAKAR 1289 Query: 211 ------EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 +I+ IE++I L F + + L + + F +N +P Sbjct: 1290 EKKGLQQIREIENEINYLIGRFNGEITR-TPLTAHDSPVF--------SNIKPE------ 1334 Query: 265 IGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF------ 317 AD L+ +RPDIR KL + + AK++LYPSL L + L NSF Sbjct: 1335 ---HADQLLASRPDIRQAGLKLIAAGLETDAAKANLYPSLVLAPQLGL---NSFRIEKLL 1388 Query: 318 -PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + G L PI ++ + + + +++ Q+ +++TVL A +E+ + L Sbjct: 1389 SSSSLAYSLIG-GLSGPILNRTALNATYDQYKANYGIQFYQYEKTVLKAWQELYSQLEVQ 1447 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 + ++ L V++ ++ +S + GR + LDIL +++ + +D ++++ Sbjct: 1448 DYARERQDMLSKQVDVLNEAAQVSNDLFIAGRATYLDILSAQKSALEASIDKIESRKENI 1507 Query: 437 KSYVDLYIAIGSGY 450 +++Y A+G G+ Sbjct: 1508 LIQLNIYKALGGGW 1521 >gi|167741763|ref|ZP_02414537.1| outer membrane efflux protein [Burkholderia pseudomallei 14] Length = 190 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 97/190 (51%), Gaps = 7/190 (3%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-- 320 + G+PA+L+ RPD+R E +L +S+A + + ++ YP+ +L GS+ T S Sbjct: 2 VAAGVPAELLGRRPDLRAAEFRLRESLANVDVTRTSFYPTFTLTGSVG-TASTSLERVLQ 60 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 N + G L LP ++ I+ ++S +E + +++++ A+ EVENAL + + Sbjct: 61 NPVATLGLGLALPFIQWNTMQLQIKVSQSQYEEAVVNFRQSLYRALGEVENALAARVQLD 120 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--S 438 + A+ L +++ +L+ + G + LD ++ + ++A+ QL + + Sbjct: 121 AEADERGRALALARRAETLAKARFAAGATGVQPWLDEQQRLRDAQS--ALARNQLGRLNN 178 Query: 439 YVDLYIAIGS 448 ++LY +G Sbjct: 179 RMNLYQVLGG 188 >gi|324497323|gb|ADY39472.1| multidrug resistance outer membrane protein MdtQ [bacterium enrichment culture clone P75-7G] Length = 472 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 99/489 (20%), Positives = 201/489 (41%), Gaps = 79/489 (16%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +++LA C PE H + P T S+ + + +WW+ +ND LN L+ Sbjct: 13 LVLILAAC--APE----HASVSPINAQATAASVNTRLSRTSWPKNEWWKDYNDPQLNSLI 66 Query: 66 KIAL---------QQNLTILQATERINAAKEN------------ILSVRADLFPSSYASI 104 AL +Q +T+ +A + A + +S + P + Sbjct: 67 AKALNDAPDMQIARQRITLAEAQAKATMAADGPQIDFSADAERQKMSAEGLMGPFAITDP 126 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + TN T L + W +DL+G+ R +E+ + +++ A+++ + + S + Sbjct: 127 AAGTTGPWYTNGTFGLTAGWDLDLWGKNRAQVEARIGKVNAQKAEMEQTRQLLASSVARL 186 Query: 164 Y-------------IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 Y + +H +E I A + +LY+ I S +G + ++ K E Sbjct: 187 YWEWQTQAAVGEVLAEIKHEQENIIGADR--ELYQHGITSS----VEGVETDINASKTEE 240 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ ++ + +E + + N S++ K + + P + + + Sbjct: 241 QLAGVKGKMKAVEARLQA-LTNTSSM-------------KLTRHALPTAEAALPATLGYE 286 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L+ RPD++ + S++++ AK+ YP ++L + AL + F Sbjct: 287 LLARRPDLQEAHWYIEASLSEVDAAKAAFYPDVNLMAFLQQDALHLSDLFRSSAQQMGVT 346 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G++ +N+ A++ + + V++A+ +V + +E + + K Q Sbjct: 347 AGLTLPIFDSGRLNANLDIAQAQNNLSVANYNKAVVDAVNQVAR---TASEVETLTAKNQ 403 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLAKSYVD----L 442 ++ K + + + Q R+S I + AK+ + IA L YVD L Sbjct: 404 QQQQVEKDAARV--VALAQARFSAGIIAGSRVSEAKIPALKEHIATLTLKGQYVDATLQL 461 Query: 443 YIAIGSGYN 451 A+G GY+ Sbjct: 462 TSALGGGYH 470 >gi|167915225|ref|ZP_02502316.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 487 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 183/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 63 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 122 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 123 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 178 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 179 DAARVEAEQARLTLSVAIVTLYGEL----DRAYALRELLQQKRRASEQVEAVLRERAARG 234 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 235 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 291 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 292 ADAPLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 351 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 352 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 411 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 412 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 470 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 471 RRTL---RVGLIGALGGGFD 487 >gi|167567649|ref|ZP_02360565.1| probable outer membrane chanel lipoprotein [Burkholderia oklahomensis EO147] Length = 340 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 37/248 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 A+ + L GC VGP Y P L P + ++ +WW F+D +L+ Sbjct: 68 AMSGALLCALTGCMVGPSYRPPDASSLKIPDAWHATLPHGGSVVELARWWRQFDDPALSS 127 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------------SYASISH 106 L+ A + TI A R+ A+ + + A L P + + +SH Sbjct: 128 LIDAAQADSPTIDAAVARMRQARASRTTSGAGLLPKLDGVASFNRSNANTQAVTSSDVSH 187 Query: 107 RF-IPNLKTNST-GQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 I + + ++T G L + W+IDLFG+ RR +++ A +D++ A A+++V + + + Sbjct: 188 STSIESGELDTTRGGLQASWEIDLFGKTRRRMQADDARIDASVADWHDARVSVAADVADA 247 Query: 164 Y---------IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK----LEA 210 Y +DA+ ++R IA + ++ + L + A K S+ + LE Sbjct: 248 YFRTRACESLVDAQEDEQRSRIATDA--VTRRRVAAGFLSPSDAALPKASIAEGDDVLER 305 Query: 211 EIKSIESD 218 + E+D Sbjct: 306 QRAECEAD 313 >gi|167924715|ref|ZP_02511806.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei BCC215] Length = 505 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 183/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGEL----DRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|229521409|ref|ZP_04410828.1| outer membrane protein of RND family multidrug efflux pump [Vibrio cholerae TM 11079-80] gi|229341507|gb|EEO06510.1| outer membrane protein of RND family multidrug efflux pump [Vibrio cholerae TM 11079-80] Length = 456 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/425 (18%), Positives = 180/425 (42%), Gaps = 34/425 (8%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 +I L ++L GC E + + + P Q+ +++ + +WW SF D LN+ + Sbjct: 7 SIIGLCVLLATGCVARSELPEQKLSV-PKQWQTSQAQSETQAIS-QWWTSFGDPQLNQWI 64 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----L 120 + L N + AT + A+ +D +P AS+S +L + Sbjct: 65 EKVLATNSDLAMATLTLKQARLEAGLATSDTYPDVSASVSSERAKSLNGGDNSKSYQTRF 124 Query: 121 DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 +++DL+G+ ++++ + + + ++++ Y + +R+ ++ Sbjct: 125 SVSYELDLWGKLSAAKDAAMWTALATQEEREATAQSLVATTAQLYWQIGYLNQRVELSSN 184 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + ++ + L+ ++ G+ +K+++++ E + +E+ + V+ + L Sbjct: 185 DIKDAQETLFLTQSQYRHGSVTKVNVLEAERTLAGLEATHRDYLQKRAEAVNAFAILFDQ 244 Query: 240 PATEFLHYMQKQSNNFQPNLYIP-INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 P S P+ IP I G+PA ++ RPD++ +L +A ++ Sbjct: 245 PPQNL-----ATSIPALPDYAIPTIEAGVPAHVLNRRPDVKQALFELKSILATKDNTDTN 299 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTH---------WSFGPKLYLPIFDKGKIKSNIRRAES 349 +PSL+L G++ G +T + G L LP + ++ A+ Sbjct: 300 YFPSLTLTGALG--------GSSTELRKLISDPIGTLGADLTLPFLNWNNMQLKRDIAQL 351 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + I++++T+ A+++V+NAL + + KLQ + + ++ I Q Y Sbjct: 352 KYESAIISYRKTLYTALQDVDNALYAKENYEFQAKKLQKQ---YDSAAEVARIYKSQYEY 408 Query: 410 SLLDI 414 +DI Sbjct: 409 GAIDI 413 >gi|118474082|ref|YP_891935.1| outer membrane efflux protein [Campylobacter fetus subsp. fetus 82-40] gi|118413308|gb|ABK81728.1| outer membrane efflux protein [Campylobacter fetus subsp. fetus 82-40] Length = 432 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 100/457 (21%), Positives = 199/457 (43%), Gaps = 46/457 (10%) Query: 7 IFSLFIVLLAGCTVGP-EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 IF LF ++ GC EY N KN +N W++ FN T LN LV Sbjct: 5 IFVLFSLIFVGCASKSLEY---------------NVKN-VNFYEPSWYKDFNQTVLNNLV 48 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQ 119 ++L+ + I A + A +R D FP+ ++KT+S + + Sbjct: 49 DLSLKNSEDINIAVLNLEIAMLKAGLIRDDFFPTPSGKFGASTNKDIKTSSGWKNGFSSE 108 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 +++D++G+ + E+ ++ + ++ +L +I+ + +Y + + + I Sbjct: 109 FALSYEVDIYGKIFDNYEARDWEAKASQSTLENLRLTIINSVTDTYFNILYLNDAIRNLK 168 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE----SDIPTLEKSFRMNVHNIS 234 Q L+ L K+ G LS+ + I ++ S+I LE S+ + + N + Sbjct: 169 QNLENLNMLDRLVFTKYELGKEEILSVRQSRQNILDLQNQILSNIRELETSYEI-IKNFT 227 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 + + + +N Q + I++ I +++NRPDI L S + Sbjct: 228 R-------SDIKFDELSLSNVQNS---DISLDIDFAILKNRPDINEAISNLNASFYDYKV 277 Query: 295 AKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFGPKLY--LPIFDKGKIKSNIRRAESS 350 ++ +LYPS+S+ S++ + G+N G L LP D ++K I +E+ Sbjct: 278 SEKNLYPSVSIGASLSDSDSKFSDSFGFNI---LGGTLNINLPFLDYSRLKKQINISEAQ 334 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ +T+++T+ NA+ EV + DK+ +Q+ + + +++ Y +G+ Sbjct: 335 FKKNVLTYEKTLSNAVNEVIKYVNYYEGDKQRYENMQNIKKEREMIVAIYESKYSEGKAE 394 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L D+L+ + + V+ L K +L + Y AI Sbjct: 395 LKDLLEAKNSLISVQNMLLNQKYRLLNDELSYYKAIA 431 >gi|319637971|ref|ZP_07992736.1| outer membrane efflux protein [Neisseria mucosa C102] gi|317400763|gb|EFV81419.1| outer membrane efflux protein [Neisseria mucosa C102] Length = 190 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD--NSFPGYNTHWSF 326 ADL+ RPD+ Q + L + AK++ YP++++ L++ + P +++ W Sbjct: 2 ADLLGKRPDLAAQREALTARRHLVASAKTEFYPNITIKALAGLSNVEIGNLP-HSSSWMA 60 Query: 327 G--PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 G P + LPIF G +++N+ R E+ EQ + + V A++E +ALT V Sbjct: 61 GLLPSVSLPIFTSGALRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYETALAAVR 120 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L +K+ + + + G + LD L + T + E L+ A+ +L +++ L Sbjct: 121 DQTEMTALARKNAAAAQSRFHAGLDNKLDFLAAQDETLQNEAQLAQAQAKLFTAWLALNT 180 Query: 445 AIGSGY 450 A G G+ Sbjct: 181 AFGGGF 186 >gi|300312015|ref|YP_003776107.1| NodT family protein [Herbaspirillum seropedicae SmR1] gi|300074800|gb|ADJ64199.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Herbaspirillum seropedicae SmR1] Length = 495 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 92/188 (48%), Gaps = 3/188 (1%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA---LTHDNSFPGYNTH 323 +P +L+ RPDI ++ + + +AK+ YP ++L+ I L N F + Sbjct: 296 LPLNLMGRRPDIVAARWQVEAASRGVDVAKARFYPDINLSAMIGFDTLLDSNPFTAASKS 355 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 +FGP + LPIF+ G +++ ++ +S + T+ +T+ +A +V + +I+ ++ + Sbjct: 356 IAFGPAITLPIFEGGALRAGLKGEYASYELAVATYNKTLNDAYADVARQIAAIHATERQL 415 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 A++ +++ +L+ YR G S L +L + + + Q V LY Sbjct: 416 PIRSEALQAAERAYALARERYRLGLVSQLTLLSAQTGVLAQRQAMVALQAQRRDQQVALY 475 Query: 444 IAIGSGYN 451 A+G G++ Sbjct: 476 KALGGGFD 483 >gi|157414890|ref|YP_001482146.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385854|gb|ABV52169.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747527|gb|ADN90797.1| Outer membrane efflux protein [Campylobacter jejuni subsp. jejuni M1] gi|315931808|gb|EFV10763.1| outer membrane efflux family protein [Campylobacter jejuni subsp. jejuni 327] Length = 456 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/386 (21%), Positives = 180/386 (46%), Gaps = 41/386 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R IFS+F+ L+ C G + + P L TQ + + +N+ T W+ S+++ LN Sbjct: 1 MRVIFSIFLAFFLSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYRSYDNAKLN 52 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLKT- 114 + + L N IN A++ +LS A DL+P+ ++ +L + Sbjct: 53 EFLNFVLLNN-------SDINIARKTLLSALARADLINYDLYPTLSGNLGFGGDKDLNSG 105 Query: 115 ----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 106 KQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFELA 164 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +F + + L ++ EL K+ G +L L+ +E + + ++ + +++ + Sbjct: 165 YFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNL 224 Query: 229 NVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + N+ LL ++ Y + S N+F+ + + IP + R D+R + L Sbjct: 225 LIKNLQDLLAKQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNSLK 281 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + + + PS+SL G+++ + D+SF S K+ LP D G++K N Sbjct: 282 SAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVKQN 339 Query: 344 IRRAESSAQEQYITWQETVLNAIKEV 369 I+ ++ + ++ I++++ + +A+ E Sbjct: 340 IKISQFTYEQLLISYEQALQSAMNEF 365 >gi|237509266|ref|ZP_04521981.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|237510257|ref|ZP_04522972.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|235001471|gb|EEP50895.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] gi|235002462|gb|EEP51886.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei MSHR346] Length = 527 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 183/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQRLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|86151569|ref|ZP_01069783.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315124127|ref|YP_004066131.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841198|gb|EAQ58446.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 260.94] gi|315017849|gb|ADT65942.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 456 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/386 (21%), Positives = 180/386 (46%), Gaps = 41/386 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R IFS+F+ L+ C G + + P L TQ + + +N+ T W+ S+++ LN Sbjct: 1 MRVIFSIFLAFFLSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYRSYDNAKLN 52 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLKT- 114 + + L N IN A++ +LS A DL+P+ ++ +L + Sbjct: 53 EFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDLNSG 105 Query: 115 ----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 106 KQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFELA 164 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +F + + L ++ EL K+ G +L L+ +E + + ++ + +++ + Sbjct: 165 YFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNL 224 Query: 229 NVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + N+ LL ++ Y + S N+F+ + + IP + R D+R + L Sbjct: 225 LIKNLQDLLAKQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNSLK 281 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + + + PS+SL G+++ + D+SF S K+ LP D G++K N Sbjct: 282 SAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVKQN 339 Query: 344 IRRAESSAQEQYITWQETVLNAIKEV 369 I+ ++ + ++ I++++ + +A+ E Sbjct: 340 IKISQFTYEQLLISYEQALQSAMNEF 365 >gi|260899350|ref|ZP_05907745.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ4037] gi|308109306|gb|EFO46846.1| RND efflux system, outer membrane lipoprotein, NodT family [Vibrio parahaemolyticus AQ4037] Length = 285 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/285 (21%), Positives = 132/285 (46%), Gaps = 13/285 (4%) Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + K+R++++ + ++ + ++L ++ GA +L +++ + + S+++ E+S Sbjct: 3 YLKQRLNLSQRNVEDAAQTLQLIEKQYQLGAVDQLDVLEAKRTLASLQAQQSEFEQSLLE 62 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 + + L P +Q P+L ++G P+DL+ RPDI+ ++ + Sbjct: 63 ANNAFAILFNQPPKSISANIQMLPEGDMPSL----SVGTPSDLLIRRPDIKAAIYEVKAA 118 Query: 289 VAKIGIAKSDLYPSLSLNGSI-----ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 +A A D P L+L G++ AL S P S G + LP ++K++ Sbjct: 119 LANKDAADLDYLPKLTLTGALGGSSKALKDLLSNP----IGSLGADMTLPFLQWNEMKNS 174 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 A+ Q +++++ + A ++VENAL++ + K +LQ + + S+ Sbjct: 175 QAIADLDYQSAIVSYRQVLYAAFQDVENALSAREKLKYQAARLQEQYDAASAAESIYAAR 234 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 Y+ G S++D L+ + T + L + + V LY ++G Sbjct: 235 YQYGSTSIMDYLNAQEETRNAQASLLENRYNQFLTQVTLYQSLGG 279 >gi|126455696|ref|YP_001074766.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|126456129|ref|YP_001075861.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 1106a] gi|226199088|ref|ZP_03794650.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|242310992|ref|ZP_04810009.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242311214|ref|ZP_04810231.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242311664|ref|ZP_04810681.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242312982|ref|ZP_04811999.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|254191208|ref|ZP_04897713.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|126229464|gb|ABN92877.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|126229897|gb|ABN93310.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106a] gi|157938881|gb|EDO94551.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pasteur 52237] gi|225928863|gb|EEH24888.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei Pakistan 9] gi|242134231|gb|EES20634.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242134453|gb|EES20856.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242134903|gb|EES21306.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] gi|242136221|gb|EES22624.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1106b] Length = 527 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 183/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|107025633|ref|YP_623144.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116693185|ref|YP_838718.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia HI2424] gi|105895007|gb|ABF78171.1| RND efflux system, outer membrane lipoprotein, NodT [Burkholderia cenocepacia AU 1054] gi|116651185|gb|ABK11825.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia HI2424] Length = 616 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 93/437 (21%), Positives = 187/437 (42%), Gaps = 49/437 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L+ LV A Q N L + QA RI A+ L ++ A+IS + Sbjct: 65 WVKQLQDPQLDDLVAEASQHNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATISRARM 124 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ + G Q+ D +++DL+G+ R SL +L D+A Sbjct: 125 PKPGDIADVTAGGYRVPVQIFGDPNVSPSSVFVGLNYQLDLWGKNRAATKSLMSLRDAAG 184 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL-------KFTQGA 199 + + +L + ++ Y ++ A+ + DL ++ +++S + +G Sbjct: 185 VEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQKLKISQRVTAVLRERTARGL 237 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 + + + I ++ ++ + L G L + + F Sbjct: 238 DNAYDASDASIKRSRLLEQIALNDEQIKLAQLQLGVLSGRGPERGLALQRPRVGAFAGG- 296 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNS 316 +P + PADL+ RPDI ++ + A ++ YP + +L G ALT + Sbjct: 297 AVPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPASL 354 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + S GP + LPIFD+G++K+ + + A + +TV +A+ +V +TS+ Sbjct: 355 FSRDSLAGSVGPAISLPIFDRGRLKAKLGADVAQADVAIGLYNKTVDDALGQVAQLVTSL 414 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQ 434 + +V + Q AV +K + ++ +R+G +D+ D+ + ++ + K++ Sbjct: 415 QTSQTLVAQQQDAVAAAQKIVQIAADRHRRGVLMQKDVDVADLTLIDERAQMIALLGKQR 474 Query: 435 LAKSYVDLYIAIGSGYN 451 + V L A+G G++ Sbjct: 475 TLR--VGLIGALGGGFD 489 >gi|86153508|ref|ZP_01071712.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843234|gb|EAQ60445.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 456 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/386 (21%), Positives = 180/386 (46%), Gaps = 41/386 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R IFS+F+ L+ C G + + P L TQ + + +N+ T W+ S+++ LN Sbjct: 1 MRVIFSIFLAFFLSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYRSYDNAKLN 52 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLKT- 114 + + L N IN A++ +LS A DL+P+ ++ +L + Sbjct: 53 EFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDLNSG 105 Query: 115 ----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 106 KQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFELA 164 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +F + + L ++ EL K+ G +L L+ +E + + ++ + +++ + Sbjct: 165 YFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNL 224 Query: 229 NVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + N+ LL ++ Y + S N+F+ + + IP + R D+R + L Sbjct: 225 LIKNLQDLLAKQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNSLK 281 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + + + PS+SL G+++ + D+SF S K+ LP D G++K N Sbjct: 282 SAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVKQN 339 Query: 344 IRRAESSAQEQYITWQETVLNAIKEV 369 I+ ++ + ++ I++++ + +A+ E Sbjct: 340 IKISQFTYEQLLISYEQALQSAMNEF 365 >gi|323164509|gb|EFZ50310.1| outer membrane efflux family protein [Shigella sonnei 53G] Length = 390 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/349 (18%), Positives = 155/349 (44%), Gaps = 22/349 (6%) Query: 114 TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + + Sbjct: 45 TEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQ 104 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Q D+ ++ K G +++ A+I +++ I ++ + Sbjct: 105 MLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRES 164 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKLADS 288 + L+G A++ +P + GIPA +L+ RPD++ + S Sbjct: 165 LRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQAS 216 Query: 289 VAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + ++ A++ YPS + G A+ D F + ++F P L LP+FD G++ +N+ Sbjct: 217 LDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLE 276 Query: 346 RAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +++ + ++VLNA+++V L ++N+++++ + A +++ + Sbjct: 277 GTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAA-- 334 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S L + E+ L + + + L ++G GY Sbjct: 335 -YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 382 >gi|294102205|ref|YP_003554063.1| outer membrane efflux protein [Aminobacterium colombiense DSM 12261] gi|293617185|gb|ADE57339.1| outer membrane efflux protein [Aminobacterium colombiense DSM 12261] Length = 433 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 108/425 (25%), Positives = 180/425 (42%), Gaps = 51/425 (12%) Query: 52 WWESFNDT--SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS--YASISHR 107 W + DT +L K + +A +QNL IL A + + AK + RA PS A + R Sbjct: 22 WAAASEDTVLTLEKALSVAKEQNLDILSAQQELVRAKGKLTEARAGGLPSLNLGAGYTRR 81 Query: 108 FIPNLKTNS-----------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK--- 153 P+L N T L KI Q+ IE A Y V+IA+ Sbjct: 82 EKPDLAGNDEENIFGAALTLTQPLYQGGKIRAGKQQASIEIQQAE----YYYVEIAEQVA 137 Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 LNV ++ ++ KE + A +K ++ K G + L + + AE + Sbjct: 138 LNVYNRFYAVLLE----KENVKTAEDAFAFAEKYLDEVKKKHVLGLATGLEITR--AEKQ 191 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLI 272 ES + + V I+ L E L+ S + NL Y P+ G P + + Sbjct: 192 QAESRTALIRARNNLEVAKINLL------ELLNVKLDTSYTIEGNLSYAPV-AGQPEESL 244 Query: 273 RN----RPDIRYQEKKLADSVA--KIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTH 323 + RPD YQ KL V +I IA+S L PS S++GS +D+ Y Sbjct: 245 KKALAYRPD--YQRAKLQVDVQDQQIRIAQSGLKPSASVSGS--YRYDDPEQAYYESGDT 300 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKI 382 W + +P+ D G I + + + +EQ + E +I+ EV + + ++ Sbjct: 301 WQVRLTVDIPVMDSGLTHGRIVQ-QKALREQTMRNVEKKEESIRSEVSSVYLDLKTAAQV 359 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + + ++L ++++ L+ + YR+G LD+LD + + + S A + A + V L Sbjct: 360 LEEAKLNLKLAEETLRLAEVGYREGVGIQLDVLDARASLTQARREYSAAVKDYAFAIVRL 419 Query: 443 YIAIG 447 A G Sbjct: 420 RKAEG 424 >gi|255021253|ref|ZP_05293303.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] gi|254969368|gb|EET26880.1| Outer membrane component of tripartite multidrug resistance system [Acidithiobacillus caldus ATCC 51756] Length = 455 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 170/394 (43%), Gaps = 41/394 (10%) Query: 9 SLFIVLLAGCTVGPEYTKPH--MPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 +LF+ LL GC P+Y + LP + + I +WW++ +LN LV Sbjct: 20 ALFL-LLTGCAGLPKYLPRNGDATALP-KMARPAGMTTIPWPRARWWQALRQPALNTLVA 77 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIP---NLKTNSTGQ- 119 AL N + +A+ R+ A+ + + + L P A F +L N TG Sbjct: 78 QALAHNPDLREASARVLLAEAQVTAAHSRLLPHFQLGLAFTQQYFSAQGLHLSANGTGNF 137 Query: 120 ------LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYI----DAR 168 +++ + +DL+G+ + ++ L AQ +L + + + Y+ D + Sbjct: 138 YTELNPIEARYHVDLWGRDADLVRAARGRLAMVRAQAAQTRLLLSTAIALHYVALQGDTQ 197 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +E + H K ++++ + G + ++ + ++ L + Sbjct: 198 LLREERRLRH----WQKAALQVAEQAYRSGLEDRSAVDGAKVTLQQSSQRCAALVAAIAA 253 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADS 288 H ++ L G + + P++ +P +P L+ RPDI + + Sbjct: 254 QKHALADLAGQGPDAVIDVNAADARQPLPDVGVPAQ--LPMGLLGRRPDIVAARWAVRAA 311 Query: 289 VAKIGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 A++G A++ YP+++L SI L D PG H + GP + LPIF+ G +++ Sbjct: 312 AAQVGAARAAFYPNINLRLLAGWNSIHLA-DLFDPGNFAH-AVGPAITLPIFEGGALRAQ 369 Query: 344 IRRAES---SAQEQYITWQETVLNAIKEVENALT 374 +R + +AQ+ Y + T+LNA+++V + L+ Sbjct: 370 LRSQNAVFLAAQDHY---RATILNALRQVADVLS 400 >gi|194365801|ref|YP_002028411.1| outer membrane efflux protein [Stenotrophomonas maltophilia R551-3] gi|194348605|gb|ACF51728.1| outer membrane efflux protein [Stenotrophomonas maltophilia R551-3] Length = 510 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 81/411 (19%), Positives = 168/411 (40%), Gaps = 33/411 (8%) Query: 8 FSLFIVLLAGC-TVGPEYTKP------HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 ++ + L +GC +V P P H+ PT ++ ++ L +WW+ F+D + Sbjct: 13 IAMLVALSSGCASVAPRTGIPDAAARHHVGQAPTPAAL-DADVLPGTPNRQWWKDFSDPN 71 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----------- 109 L+ LV +A++ N + A + A+ + R D PS + + Sbjct: 72 LDALVTLAMRGNHDLKSALAAVVEARALAGAARKDYLPSGALQVKAEAMQSAQIEADPYR 131 Query: 110 ------PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVI-SKLIP 162 P+ + S GQ+ S W++DLFG+ + A A + V+ +++ Sbjct: 132 QDLPRPPSQRLLSAGQMFS-WELDLFGRIGTAAAMADRKADAAAADARSAAAVLQAEVAK 190 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y R + +S + + L + + ++ G + + +E+E + + Sbjct: 191 NYFLLRMDQISLSSLDREVGLSEARVARVKARYAAGLVDRREALAVESEHAELVAQEAAT 250 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQ 281 + + ++ L G T + + ++ P DL+ RPD+ Sbjct: 251 VTRLQADRAALAVLAGRSPTARDDTWEALLAPTPLPAPPGLASLAQPTDLLARRPDVAKA 310 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + +L S+ + +A+ P L+LN G I + +S GP+L G+ Sbjct: 311 DARLRASLGNVVLAERAHLPRLTLNVFGGILAPFGSLGDSSAKRFSAGPELQWEWLSFGR 370 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 K+ A + + + + +++TVL A+KE E++L + + ++Q AV Sbjct: 371 KKAREEAARAGSDQNWHAFEQTVLTALKESEDSLHAWTSSQ---VRMQQAV 418 >gi|305433142|ref|ZP_07402298.1| outer membrane efflux protein [Campylobacter coli JV20] gi|304443843|gb|EFM36500.1| outer membrane efflux protein [Campylobacter coli JV20] Length = 454 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/389 (21%), Positives = 179/389 (46%), Gaps = 47/389 (12%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 N+L + + F L+ C V K +P PT S + K+L NI T W++++++ L Sbjct: 3 NLLSILLAFF---LSACGV-----KLSLPKEPTM-SEESFKDL-NI-TYDWYKAYDNAKL 51 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSV--RADL-----FPSSYASISHRFIPNLKT 114 N+ + L N IN A+ +L+ RADL +P+ A++ NL + Sbjct: 52 NEFLNFVLLNN-------SDINIARSTLLTALARADLIDYDFYPTLSANLGFSGEKNLNS 104 Query: 115 NS-----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + L+ +++D++G+ R +S + ++ ++ K+++I+ + + Sbjct: 105 GVQSKKFSNSLNLSYELDIYGRIRDSSSASDFSAKASAYDLENLKISMINTALNGIFELA 164 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +F + ++ + L ++ EL KF G +L L+ +E + D+ E++ + Sbjct: 165 YFNDVDNLLKEYLANLEQMRELYAYKFELGKIEELDLLNIEQNLLKARQDLLRNEQNRNL 224 Query: 229 NVHNISTLLG-YPATEFLHYMQKQS----NNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + N+ L+G ++ Y + + N PN IP+ + + RPD+R + Sbjct: 225 LIKNLQDLIGKQEGFAYIDYFKALTLSDFKNLNPNFNIPL------EALVYRPDVRSKLN 278 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 L + + ++PS+SL G++ + D+SF S K+ LP D G++ Sbjct: 279 TLKSAFKDYTSVQKSIFPSISLGGALNGSDKQFDDSFKF--EVLSGNIKISLPFLDYGRV 336 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEV 369 K NI+ ++ + + +++++ +A+ E Sbjct: 337 KQNIKISQFDYESALVNYEQSLQSAMNEF 365 >gi|270157852|ref|ZP_06186509.1| putative outer membrane efflux protein [Legionella longbeachae D-4968] gi|289163884|ref|YP_003454022.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|269989877|gb|EEZ96131.1| putative outer membrane efflux protein [Legionella longbeachae D-4968] gi|288857057|emb|CBJ10872.1| putative outer membrane efflux protein [Legionella longbeachae NSW150] Length = 469 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 97/478 (20%), Positives = 218/478 (45%), Gaps = 52/478 (10%) Query: 7 IFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 I SL L + GC++ E P+ S+ + + + +++ FND L++L+ Sbjct: 6 IISLLTALTVTGCSLFGEIQTKTKPIKTDNLSVKHIYRIPKNKSRSYFKHFNDPQLDQLI 65 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNS 116 IAL I A R++ +++ + L+P+ +Y I P+++ Sbjct: 66 SIALNDAPNIHSAKARVDRSQQLAKIAYSTLWPAINLDGYLEKAYFPIRGTIPPDIRPLL 125 Query: 117 TG---------QLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDIAKLNVI--SKLIPSY 164 T ++++D +G+ R E+ + + ++A ++D+A+ ++ + + +Y Sbjct: 126 TRVNQANIAEIGFQFNYELDFWGKNR--ENLASKISESFATRMDLAETRLVLSAAVATTY 183 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS----KLSLVKLEAEIKSIESDIP 220 + ++ + +A + + L K+ ++ + QG S K +L + I S+E D Sbjct: 184 FEIQNSIIQQRLAQENVRLLKQLADIILDRAKQGIASNIPVKTALANYQTAILSVE-DFK 242 Query: 221 TLEKSFRMNVHNISTLLGY-PAT-----EFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E R H ++ L+G P T Y +KQ L +P IPA+++ Sbjct: 243 RAEMQSR---HQLAVLMGKNPFTTQVDVAAFTYDKKQ-------LVLPK--IIPANILAQ 290 Query: 275 RPDIRYQEKKLADSVA-KIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKL 330 RPDI + L +S A +I +AK+ +P+++L G +++ + +F + + + + Sbjct: 291 RPDIA-SARALTESAAHQINVAKTAFFPNINLRGLLSVQSVYFNKAFNIWFENDNASAAI 349 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD G ++N+ + + + + +T+LN++++V + L+++ + A Sbjct: 350 DLPIFDLGARRANLGVSYTQFELAVNQYNQTILNSLQQVSDQLSTLKTLNTQIAAQNQAF 409 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + + L Y QG +++I++ + + L + + ++++ L A+G Sbjct: 410 NITESNYKLFQARYTQGIIDYPQLIEIKQLLIQQKATLQQLQTRQKQAFIALLTALGG 467 >gi|167588203|ref|ZP_02380591.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 188 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 18/172 (10%) Query: 289 VAKIGIAKSDLYPSLSLNGSIA-LTHDNSF--PGYNTH-------WSFGPKLYLPIFDKG 338 A++G+A +DL+P +L G + +T F G +T+ WSF D G Sbjct: 12 TARVGVATADLFPRFTLTGLLGSMTSSYGFFRSGSDTNLIALGVDWSF--------LDVG 63 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++ + + + A Q +++TVL A++E ENAL + + T L+ A ++ Sbjct: 64 RVRARLAASNADAAGQLAQYRQTVLGALEETENALLRVARTRDETTHLERAATDSARAAQ 123 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + G ++LD ER + + + + + A + V LY A+ G+ Sbjct: 124 LAHARFTAGAIDYYEVLDAERTLLQAQDAAADGRMRSADATVALYKALAGGW 175 >gi|306815788|ref|ZP_07449937.1| putative outer membrane efflux protein MdtP [Escherichia coli NC101] gi|305851450|gb|EFM51905.1| putative outer membrane efflux protein MdtP [Escherichia coli NC101] Length = 376 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/349 (18%), Positives = 153/349 (43%), Gaps = 22/349 (6%) Query: 114 TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y + + Sbjct: 31 TEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQ 90 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + + Q D+ ++ K G +++ A+I +++ I ++ + Sbjct: 91 MLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRES 150 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKLADS 288 + L+G A++ +P + GIPA +L+ RPD++ + S Sbjct: 151 LRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQAS 202 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + ++ A++ YPS + L D F + ++F P L LP+FD G++ +N+ Sbjct: 203 LDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLE 262 Query: 346 RAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 +++ + ++VLNA+++V L ++N+++++ + A +++ + Sbjct: 263 GTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAA-- 320 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y++G S L + E+ L + + + L ++G GY Sbjct: 321 -YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 368 >gi|262198035|ref|YP_003269244.1| RND efflux system, outer membrane lipoprotein, NodT family [Haliangium ochraceum DSM 14365] gi|262081382|gb|ACY17351.1| RND efflux system, outer membrane lipoprotein, NodT family [Haliangium ochraceum DSM 14365] Length = 517 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 3/152 (1%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW- 324 G+P +L++ RPD++ L + + A SD YP LSL+ S+ T +S W Sbjct: 325 GVPGELLQRRPDVQRAYLSLLAADRDMAAAVSDRYPRLSLSASLG-TRGSSASELFEGWF 383 Query: 325 -SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S L P+FD G ++ + R + +++ + +T L A +EVE+AL + ++ + Sbjct: 384 ASLAANLLAPLFDGGARQAEVERTNAIKRQRLYAYGQTALLAFREVEDALVQEAQQRERI 443 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +L+ L + + I Y G +D+L Sbjct: 444 ARLEEQARLARLTYEQLQIEYLNGLSDYIDVL 475 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 50/244 (20%), Positives = 114/244 (46%), Gaps = 11/244 (4%) Query: 1 MNILRAIFSLFI-VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 M + R+I + +LLAGC P ++P +P T + S + +WW +F+D Sbjct: 1 MFVRRSICTATCALLLAGCA--PRVSEPELPAAATAAAFSRSGEAAPAE--RWWTAFDDR 56 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----PNLKTN 115 +L+ LV AL+ N + A ER+ A+ + A LFP S + + P+ Sbjct: 57 ALDALVAEALRTNFDLQIAWERLREARAVVAGASASLFPEITGSAAAELVYPRGPD-DAL 115 Query: 116 STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + L + +++DL+G+ +E+ ++ A A L++ +++ ++ + ++ Sbjct: 116 LSLALSASYELDLWGRLGSRVEAERYRARASLADYRTAALSLSAEIAQTWYRLLEARAQV 175 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + ++ ++ + L +F G + L++ + I++ + + ++ +H +S Sbjct: 176 LLLAEQVEANERVLRLLRSRFGSGQVRSVDLLRQQQLIEATRAQQASAVADVQVLLHQLS 235 Query: 235 TLLG 238 L+G Sbjct: 236 ALVG 239 >gi|167565779|ref|ZP_02358695.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 206 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 17/179 (9%) Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKG 338 E+ L + A IG A++ +P +SL G+ T F WSF P + LPIF+ G Sbjct: 4 EETLRAANANIGAARAAFFPKISLTGAFGTASPTLGGLFKAGTAAWSFAPSIALPIFEGG 63 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + +N+ A + + +++ + +A +EV + L + + + L+ ++ Sbjct: 64 QNIANLDLAHVQKRIEIANYEKAIQSAFREVSDGLAARGTYDQQIAALERNEHAQQRRYD 123 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS-------YVDLYIAIGSGY 450 LS + Y+ G S L +L + DL A++QL + VDLY A+G G+ Sbjct: 124 LSDLRYKNGVDSYLSVL-------TAQTDLYSAQQQLISARLARWSNLVDLYRALGGGW 175 >gi|126442402|ref|YP_001061814.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia pseudomallei 668] gi|126445040|ref|YP_001062911.1| Outer membrane protein [Burkholderia pseudomallei 668] gi|126221893|gb|ABN85398.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 668] gi|126224531|gb|ABN88036.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 668] Length = 527 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 182/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQRLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|124381975|ref|YP_001024822.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia mallei NCTC 10229] gi|124382405|ref|YP_001024016.1| putative outer membrane protein [Burkholderia mallei NCTC 10229] Length = 527 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 182/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQRLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|154492245|ref|ZP_02031871.1| hypothetical protein PARMER_01879 [Parabacteroides merdae ATCC 43184] gi|154087470|gb|EDN86515.1| hypothetical protein PARMER_01879 [Parabacteroides merdae ATCC 43184] Length = 432 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 134/287 (46%), Gaps = 38/287 (13%) Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 D+ N++ +Y A K + Q +D+ ++ + +F G SK L++++ Sbjct: 132 DLTTDNIVYAADLNYWSAAARKGMYDVMCQYVDIVQELANVLTTRFNDGQISKTDLLQVQ 191 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + +K E + K +++ + N++ L+G P + + QP +P++IG A Sbjct: 192 SRLKEAELNKSAAYKDYQIALQNLNVLMGVPPMTPVE-IADAITTVQP---LPMHIGEEA 247 Query: 270 DLIRNRPD-------IRYQEKKLADSVAK------IGIAKSDLYPSLSLNGSIALTHDNS 316 L +NRPD + YQ++++ S AK IG + P L++ GS L Sbjct: 248 AL-QNRPDFTISRLNVEYQKRQINLSKAKYNPTLAIGFQGTWGTPMLNVKGSDQLWTPAV 306 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVEN 371 F L +P+F G R E ++Q+ + +E V++ + EV N Sbjct: 307 FAS----------LKIPLFRWGA-----RFKEVNSQKAILRSKEYVMDYTRDQISQEVAN 351 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + TS+ E+ K + + A ++ ++++ L+ +Y++G+ +LD+L + Sbjct: 352 SWTSLTENTKQIDVAEEACKIAEENLDLNTFSYKEGKLPILDVLSAQ 398 >gi|163749183|ref|ZP_02156433.1| putative outer membrane protein [Shewanella benthica KT99] gi|161331253|gb|EDQ02142.1| putative outer membrane protein [Shewanella benthica KT99] Length = 227 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 106/222 (47%), Gaps = 30/222 (13%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + + S++ +YI+ R F+ER+ ++ + + + ++ + ++ +++ G ++L + + ++++ Sbjct: 1 MTITSEVARNYINFRTFQERMLLSRRNIQIQQRVVHITQVQYDSGNVTELDVQQAKSQLY 60 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY------------- 260 + ++ +P+L+ + ++ LLG E + ++ + + + Y Sbjct: 61 TTKAALPSLKLGMMQARNALAVLLGVMPGEIVPMLESEQLKAKIDAYNIEYGRADTKRTM 120 Query: 261 --------IP----INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P ++ I A L+ RPD++ E AKIG A++ LYPS SL GS Sbjct: 121 TDDNTESIVPTPPMLDASIDASLVMRRPDLQVAELLARAQSAKIGSAEAALYPSFSLFGS 180 Query: 309 IALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKSNIR 345 I + + + S GP IF G+IK+N+R Sbjct: 181 IGINSNTPSGSSFSFSDSLTLSAGPSFSWNIFQYGRIKNNVR 222 >gi|170737549|ref|YP_001778809.1| RND efflux system outer membrane lipoprotein [Burkholderia cenocepacia MC0-3] gi|169819737|gb|ACA94319.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia cenocepacia MC0-3] Length = 618 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 93/437 (21%), Positives = 187/437 (42%), Gaps = 49/437 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L+ LV A Q N L + QA RI A+ L ++ A+IS + Sbjct: 65 WVKQLQDPQLDDLVAEASQHNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATISRARM 124 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ + G Q+ D +++DL+G+ R SL +L D+A Sbjct: 125 PKPGDIADVTAGGYRVPVQIFGDPNVSPSSIFVGLNYQLDLWGRNRAATKSLMSLRDAAG 184 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL-------KFTQGA 199 + + +L + ++ Y ++ A+ + DL ++ +++S + +G Sbjct: 185 VEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQKLKISQRVTAVLRERTARGL 237 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 + + + I ++ ++ + L G L + + F Sbjct: 238 DNAYDASDASIKRSRLLEQIALNDEQIKLAQLQLGVLSGRGPERGLALQRPRVGAFAGG- 296 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNS 316 +P + PADL+ RPDI ++ + A ++ YP + +L G ALT + Sbjct: 297 AVPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPASL 354 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + S GP + LPIFD+G++K+ + + A + +TV +A+ +V +TS+ Sbjct: 355 FSRDSLAGSVGPAISLPIFDRGRLKAKLGADVAQADVAIGLYNKTVDDALGQVAQLVTSL 414 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQ 434 + +V + Q AV +K + ++ +R+G +D+ D+ + ++ + K++ Sbjct: 415 QTSQTLVAQQQDAVAAAQKIVQIAADRHRRGVLMQKDVDVADLTLIDERAQMIALLGKQR 474 Query: 435 LAKSYVDLYIAIGSGYN 451 + V L A+G G++ Sbjct: 475 TLR--VGLIGALGGGFD 489 >gi|318604503|emb|CBY26001.1| outer membrane component of tripartite multidrug resistance system [Yersinia enterocolitica subsp. palearctica Y11] Length = 456 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 36/353 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYAS 103 +WW D L+ L+ +LQ + ++ QA R+ A+ + A P S Sbjct: 22 QWWRVLEDPQLDALMSQSLQTSPSLKQAAARVREAQSVVGQADAANGPNLDLNGSSKREK 81 Query: 104 ISHRFI----------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 +S + P +T++T L+ ++ D +G+ R + ++ A +++A A+ A Sbjct: 82 VSQNTLQPFLQSYPDKPLYETSNTLGLNLSYEFDWWGKYRNQVNAANAQVNAARAEQQQA 141 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L + S + Y + ++ Q +D + EL ++ G + +A+ Sbjct: 142 ALTLTSSVASVYYQLQSNFALKNVLQQEVDNNDRLAELRTKQYQAGIYGIEIPQQTKAQA 201 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIG-IPA 269 + + I L+ H ++ L G AT+ L + P++ G + Sbjct: 202 DTAKQQIIQLQSQGEQLKHQLAALTGQGPNATQNLRQVPL------PDITRLAPKGELTT 255 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH------ 323 DL+ RPDI Q + + ++ A+ + YPSLS+ G L+ N F G N + Sbjct: 256 DLLGKRPDITAQRQLVESYDQRVKAARKEFYPSLSITGFAGLSTTN-FQGTNPNLLEAAS 314 Query: 324 --WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 W+F P + LPIF G ++S + + E ++ +T+LNA++E +A+T Sbjct: 315 QAWNFAPAISLPIFHAGALRSKLSEESALYDEAVESYNQTILNAVRETADAIT 367 >gi|134282610|ref|ZP_01769314.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 305] gi|134246167|gb|EBA46257.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 305] Length = 527 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 79/452 (17%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + + A+ + +L ++ A+ + Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE-------LDRAYALRELLRQKRR---------ASEQ 231 Query: 203 LSLVKLEAEIKSIESD----------------IPTLEKSFRMNVHNISTLLGYPATEFLH 246 + V E + I++ I ++ ++ + L G L Sbjct: 232 VEAVLRERAARGIDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLS 291 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL--- 303 + + P P+ +PA L+ RPDI ++ + A I ++ YP + Sbjct: 292 LARPK---LAPLADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLA 348 Query: 304 SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 +L G ALT + F S GP L LPIFD+ ++K+ + ++A + +TV Sbjct: 349 ALGGLFALTPASLFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVD 408 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A+ EV LTS+ ++ Q A+ ++ ++L+ +R+G DI D+ + T Sbjct: 409 AALGEVARQLTSLATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLL 467 Query: 424 VE----VDLSIAKRQLAKSYVDLYIAIGSGYN 451 E V+L +R L V L A+G G++ Sbjct: 468 DERAHVVELQARRRTL---RVGLIGALGGGFD 496 >gi|53721576|ref|YP_110561.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|53722373|ref|YP_111358.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|217418477|ref|ZP_03449984.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|254262635|ref|ZP_04953500.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|254264267|ref|ZP_04955132.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|52211990|emb|CAH37997.1| outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|52212787|emb|CAH38819.1| putative outer membrane efflux protein [Burkholderia pseudomallei K96243] gi|217397781|gb|EEC37796.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|254213637|gb|EET03022.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] gi|254215269|gb|EET04654.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 1710a] Length = 527 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 182/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|332160634|ref|YP_004297211.1| outer membrane efflux protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664864|gb|ADZ41508.1| outer membrane efflux protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 456 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 36/353 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-------SSYAS 103 +WW D L+ L+ +LQ + ++ QA R+ A+ + A P S Sbjct: 22 QWWRVLEDPQLDALMSQSLQTSPSLKQAAARVREAQSVVGQADAANGPNLDLNGSSKREK 81 Query: 104 ISHRFI----------PNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIA 152 +S + P +T++T L+ ++ D +G+ R + ++ A +++A A+ A Sbjct: 82 VSQNTLQPFLQSYPDKPLYETSNTLGLNLSYEFDWWGKYRNQVNAANAQVNAARAEQQQA 141 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 L + S + Y + ++ Q +D + EL ++ G + +A+ Sbjct: 142 ALTLTSSVASVYYQLQSNFALKNVLQQEVDNNDRLAELRTKQYQAGIYGIEIPQQTKAQA 201 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPINIG-IPA 269 + + I L+ H ++ L G AT+ L + P++ G + Sbjct: 202 DTAKQQIIQLQSQGEQLKHQLAALTGQGPNATQNLRQVPL------PDITRLAPKGELTT 255 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH------ 323 DL+ RPDI Q + + ++ A+ + YPSLS+ G L+ N F G N + Sbjct: 256 DLLGKRPDITAQRQLVESYDQRVKAARKEFYPSLSITGFAGLSTTN-FQGTNPNLLEAAS 314 Query: 324 --WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 W+F P + LPIF G ++S + + E ++ +T+LNA++E +A+T Sbjct: 315 QAWNFAPAISLPIFHAGALRSKLSEESALYDEAVESYNQTILNAVRETADAIT 367 >gi|57167637|ref|ZP_00366777.1| outer membrane efflux family protein, putative [Campylobacter coli RM2228] gi|57020759|gb|EAL57423.1| outer membrane efflux family protein, putative [Campylobacter coli RM2228] Length = 454 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 82/396 (20%), Positives = 175/396 (44%), Gaps = 63/396 (15%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-TLKWWESFNDTS 60 N+L + + F L+ C V K +P PT N ++ +++ T W++++++ Sbjct: 3 NLLSILLAFF---LSACGV-----KLSLPKEPTM----NEESFKDLNITYDWYKAYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSV--RADLFPSSYASISHRFIPNLKTN--- 115 LN+ + L N IN A+ +L+ RADL I + F P L N Sbjct: 51 LNEFLNFVLLNN-------SDINIARSTLLTALARADL-------IDYDFYPTLSANLGL 96 Query: 116 --------------STGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + L+ +++D++G+ R +S + ++ ++ K+++I+ Sbjct: 97 SGEKNLNSGVQSKKFSNSLNLSYELDIYGRIRDSSSASDFSAKASAYDLENLKISMINTA 156 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + +F + ++ + L ++ EL KF G +L L+ +E + D+ Sbjct: 157 LNGIFELAYFNDVDNLLKEYLANLEQMRELYAYKFELGKIEELDLLNIEQNLLKARQDLL 216 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQS----NNFQPNLYIPINIGIPADLIRNR 275 E++ + + N+ L+G ++ Y + + N PN IP+ + + R Sbjct: 217 RNEQNRNLLIKNLQDLIGKQEGFAYIDYFKALTLSDFKNLNPNFNIPL------EALVYR 270 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPGYNTHWSFGPKLYL 332 PD+R + L + + ++PS+SL G++ + D+SF S K+ L Sbjct: 271 PDVRSKLNTLKSAFKDYTSVQKSIFPSISLGGALNGSDKQFDDSFKF--EVLSGNIKISL 328 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 P D G++K NI+ ++ + + +++++ +A+ E Sbjct: 329 PFLDYGRVKQNIKISQFDYESALVNYEQSLQSAMNE 364 >gi|291614815|ref|YP_003524972.1| RND efflux system, outer membrane lipoprotein, NodT family [Sideroxydans lithotrophicus ES-1] gi|291584927|gb|ADE12585.1| RND efflux system, outer membrane lipoprotein, NodT family [Sideroxydans lithotrophicus ES-1] Length = 518 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 89/494 (18%), Positives = 191/494 (38%), Gaps = 57/494 (11%) Query: 10 LFIVLLAGCTVGPEYTK-------PHMPLLPTQFS------IGNSKNLINIDTL--KWWE 54 + L GCT G + PH Q S +G + ++ + + +WW+ Sbjct: 12 CLLATLCGCTSGLVTKRTEVLSSAPHAAPSSMQESASAKVQLGVPQRFVSAEDISAEWWK 71 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPN 111 F L+ L+K + + N A + AKE + + +P +SY ++ + Sbjct: 72 LFQSPQLDTLIKRSFKTNPDFEAAQAALQRAKEYAAAQQGFFYPKVSASYPPSRNKMARS 131 Query: 112 LKTNSTGQ--------LDSDWKIDLFGQRRH---------------IESSLANLDSAYAQ 148 + STGQ DS+ + G + E++ ++SA A+ Sbjct: 132 FGSGSTGQENNGPVIQADSNGGVKREGPAYYSFQAVQLTVGYMPDMFEANHGQVESAQAR 191 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 D + + S ++ + I + +I +I+ L ++ +E+ + G +L + + Sbjct: 192 TDGTYITLASHVVAAAIQEASLRAQIEAQLRIVSLDQQALEIVRNQLKLGYVKELDVRQQ 251 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS-------NNFQPNLYI 261 E + ++ L++ + L G + + + + Q + + Sbjct: 252 EMTSALAQRELAPLQEELEQTRDLMHALAGNTSAQDMDHDLDQDIDEAIILDGLHLEQEL 311 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY- 320 P+++ P+ L+ RPD+R E +L + A+ G+ + + P +++G+I S P + Sbjct: 312 PLSL--PSRLVEQRPDVRMAEMQLHEVSARYGVNITRMMPQFTVSGAIGGMA--SSPKWM 367 Query: 321 ----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + + K IFD +++ R A ++ V+ A++ V + L I Sbjct: 368 VKNGGSFFDLAAKGSNHIFDNAALRTKTRVARQDLILAGAQYRSVVMAALQNVADILYVI 427 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 D + + A ++ K + Y G +L ++ ++L A+ Sbjct: 428 QSDDRALKAASKAAQVASKMGEQTRNQYEAGSVDFQGLLVAQQNEQLAIINLVQAQTNRF 487 Query: 437 KSYVDLYIAIGSGY 450 V L+ A+G G+ Sbjct: 488 GDAVALFQALGGGW 501 >gi|121612200|ref|YP_001000310.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005259|ref|ZP_02271017.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87250147|gb|EAQ73105.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 456 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 84/386 (21%), Positives = 181/386 (46%), Gaps = 41/386 (10%) Query: 4 LRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 +R IFS+F+ L+ C G + + P L TQ + + +N+ T W+ S+++ LN Sbjct: 1 MRVIFSIFLAFFLSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYRSYDNAKLN 52 Query: 63 KLVKIALQQNLTILQATERINAAKENILS--VRADL-----FPSSYASISHRFIPNLKT- 114 + + L N IN A++ +LS RADL +P+ ++ +L + Sbjct: 53 EFLNFVLLNN-------SDINIARKTLLSALTRADLIDYDLYPTLSGNLGFGGDKDLNSG 105 Query: 115 ----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 106 KQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFELA 164 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +F + + L ++ EL K+ G +L L+ +E + + ++ + +++ + Sbjct: 165 YFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNL 224 Query: 229 NVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + N+ LL ++ Y + S N+F+ + + IP + R D+R + L Sbjct: 225 LIKNLQDLLAKQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNSLK 281 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 + + + PS+SL G+++ + D+SF S K+ LP D G++K N Sbjct: 282 SAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVKQN 339 Query: 344 IRRAESSAQEQYITWQETVLNAIKEV 369 I+ ++ + ++ I++++ + +A+ E Sbjct: 340 IKISQFTYEQLLISYEQALQSAMNEF 365 >gi|238022754|ref|ZP_04603180.1| hypothetical protein GCWU000324_02665 [Kingella oralis ATCC 51147] gi|237865957|gb|EEP67093.1| hypothetical protein GCWU000324_02665 [Kingella oralis ATCC 51147] Length = 285 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFP 318 + ADL+ RPD+ Q + L + AK++ YP++++ L+ H +SF Sbjct: 95 LTADLLGKRPDLAAQREALTARHHLVASAKTEFYPNITIKALAGLSNVEIGNLPHSSSFL 154 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 P + LPIF G +++N+ R E+ EQ + + V A++E +ALT Sbjct: 155 A-----GLLPSVSLPIFTSGALRANLSRKEAEFDEQAARYNKNVYTALREAADALTQYET 209 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 V L +K+ + + YR G + LD L T + E L+ A+ +L + Sbjct: 210 AAAAVRDQTEMTALARKNAAAAQSRYRAGLDNKLDWLAAADETLQNEAQLAQAQAKLFTA 269 Query: 439 YVDLYIAIGSGY 450 ++ L A G G+ Sbjct: 270 WLALNTAFGGGF 281 >gi|197103866|ref|YP_002129243.1| efflux system protein [Phenylobacterium zucineum HLK1] gi|196477286|gb|ACG76814.1| efflux system protein [Phenylobacterium zucineum HLK1] Length = 489 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 91/186 (48%), Gaps = 6/186 (3%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWS 325 ++L+ RPD+R + ++ + + +A+ +P+ + + + + PG+ + W+ Sbjct: 293 SELLERRPDVREAQARVRSAAGQQRLAQLAFFPTFTFSPGVGWSRQEQ-PGFFSESQSWT 351 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVT 384 G + PI ++ S ++ +++ EQ +T +++TV A +E E AL ++ D++ V Sbjct: 352 IGGSVLQPILSIPRLMSELK-VQNARTEQAVTQYEKTVQTAFQEAEGALVRLDADRRRVA 410 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 L ++ + Y++G L +L+ E++ L+ A+ Q + V Y Sbjct: 411 LLTEGERRAARAFEAARTGYQRGLTDLTTLLNAEQSWRATRAQLTSAQVQALRRAVQAYK 470 Query: 445 AIGSGY 450 A+G G+ Sbjct: 471 AVGGGW 476 >gi|285018774|ref|YP_003376485.1| outer membrane efflux protein [Xanthomonas albilineans GPE PC73] gi|283473992|emb|CBA16493.1| putative outer membrane efflux protein [Xanthomonas albilineans] Length = 481 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 88/429 (20%), Positives = 176/429 (41%), Gaps = 45/429 (10%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERIN-------------------AAKENILSV 92 WW++ D L+ L+ ALQ ++ A R+ +A L + Sbjct: 52 WWKALGDRQLDALIAEALQGTPSLEAADARLRLAQAQAGAADADRGAKLSLSAGYTGLQL 111 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYA-QVDI 151 DL I +++ + LD + +DL+G +R ++ +D A+A QVD Sbjct: 112 PKDLVGDK---IGGKYL----HDEQALLDFSYGVDLWGGKRAAWEAV--VDQAHAAQVDA 162 Query: 152 --AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 A+L + + + +Y+ + + +A L ++++L + G S L L + E Sbjct: 163 QAARLELSAAVARAYVQLGYAWQLYDLAGAELARADRSLKLVRQRRDAGIDSTLQLRQAE 222 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A + ++ ++ LLG L + P L P + +P+ Sbjct: 223 ARLPVARQQQQAAQQQIDEARIALAALLGRGPDRGLQIQR-------PRLLDPQAVSLPS 275 Query: 270 ----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS 325 DLI RPD+ ++ + I AK+ YPS++L L N + + Sbjct: 276 VLPSDLIGRRPDVVAARWRVDAAAQGIHAAKTQFYPSINLTFLGGLVSSNPSDFFKSGSV 335 Query: 326 FG---PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 G P + LP+FD G+++S + ++ + + ++ A++EV + +++ + Sbjct: 336 LGILSPGVSLPLFDSGRLRSRLAERDAQYDLAVANYNQALVAALREVADQVSAARSLAQQ 395 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + AV+ + + L+ Y G + LD+L +++ + + L+ + V L Sbjct: 396 AQQQAQAVDTAQAAFDLAQQRYHAGIGNYLDVLSVQQQLFEAQQRLASLQTNRILVSVRL 455 Query: 443 YIAIGSGYN 451 A+G GY Sbjct: 456 NQALGGGYE 464 >gi|326386467|ref|ZP_08208090.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326209128|gb|EGD59922.1| RND efflux system outer membrane lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 479 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 107/479 (22%), Positives = 205/479 (42%), Gaps = 60/479 (12%) Query: 15 LAGCTVGPEYTKPH-MPLLPTQFSIG----NSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 LA C P T+PH P+ P G + + D WW + D +L+ V+ L Sbjct: 7 LAACVHAP-ATEPHRAPVTPPAAFAGIDGAAPEQAVPFD--HWWTLWGDPALDAQVERTL 63 Query: 70 QQNLTILQATERINAAKENILSVRADLFP------SSYASISHRFI-----------PNL 112 N I A R+ AA+ + L+P + + ++++ I P Sbjct: 64 AANQDIRIAMARVRAARAMAAVAESALYPTIAANGAVWGTVANGTIDGSLGQLLAASPEG 123 Query: 113 KTNSTG-----QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA---KLNVISKLIPSY 164 + + G L + W+ D+FG R H + A + Q D+A +L V++ ++ ++ Sbjct: 124 ASGTAGGGHVVALGAAWEPDVFGGR-HADRDAARAAALGTQ-DMAAGVRLMVVADVVENW 181 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 A R+ + + L I + + G + ++ K+EA I + L + Sbjct: 182 QQAAGLARRLILLDRSLSAADTLIMYARARMAAGQSDAATVAKVEAARAGIAAQRGPLVE 241 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIG-IPADLIRNRPDIRYQE 282 + ++ L G P + + + L +P + G +P+ ++ RPD+R Sbjct: 242 LIAIRQRRLAVLAGDPPEKPVAVPAES------GLTLPAVPTGELPSTVLARRPDVRATA 295 Query: 283 KKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFPGYNTHWSF-GPKLYLPIFD 336 +A A++ K DL P ++ +G + L PGY G + +P+F Sbjct: 296 AAVAARAARLKSLKRDLLPRFNVLIGGADGHVTLA---GIPGYGGQAGLIGLQASVPLFT 352 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI--NEDKKIVTKLQHAVELHK 394 G++ + I ++ TVL A+++VE A TS+ D+ + + VE ++ Sbjct: 353 AGRLHARIVGGDADLDAALAMQDRTVLAALEDVEAA-TSLRHGADQSRAQRERAGVESNR 411 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK--SYVDLYIAIGSGYN 451 + ++ + +R GR +L D+L+ R A D ++ + Q+A+ + V LY A+G G++ Sbjct: 412 RLVATDAL-FRAGRKTLGDVLE-ARLDALSAAD-AVEQAQIAQGSATVQLYRALGGGWD 467 >gi|270294027|ref|ZP_06200229.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275494|gb|EFA21354.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 466 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 66/335 (19%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + ALQQN+TI + R+NA A+ ++ + RA LFPS AS+S R + P +TN+ Sbjct: 47 LQACIDYALQQNITIRK--NRLNAESAQVDVKTARAALFPSLSASVSQRVVNRPKSETNT 104 Query: 117 ------------------TGQLDSDWKIDLFGQR------RHIESSLANLDSAYAQVDIA 152 + +D++W + G+R + + + +A L A ++ I Sbjct: 105 IIDGDNITSSQSKTSYNGSYGIDANWTLYNGGKRLNTIKQQQLNNRIAELSVAQSENSIE 164 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + +Y+ + E + + L++ + E + G+ +K L +LEA++ Sbjct: 165 E-----SIAQTYVQILYAAEAVKVNESTLEVSQAECERARQLLEAGSIAKSDLAQLEAQV 219 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP 268 + + + T + +TL Y + NLYIP N+ P Sbjct: 220 STDKYQLVTAQ----------ATLQDYKLQLKQLLELDGESEM--NLYIPTLGTENVLAP 267 Query: 269 ----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---- 316 D+ R+ RP+I + + S I IA++ P+LSL+ I +H N Sbjct: 268 LPTKTDVYRSALVLRPEIEAGKLNIQTSDLDIKIARAGYLPTLSLSAGIGTSHANGNDFT 327 Query: 317 -FPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF + KS + +A+ Sbjct: 328 FSEQVKQNWNNSLGFTVSVPIFSNRQTKSAVEKAK 362 >gi|325528238|gb|EGD05410.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 205 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RPD+ E+ +A + A+IG+A++ +P ++L+ I F G T WS G + Sbjct: 1 RPDVASAERAMAAANAQIGVARAAYFPRIALSPYIGWGA-TRFSGLFTVPALLWSVGASV 59 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F+ GK+K+ + A++ +++TVL A +EV+NA+T ++ + + AV Sbjct: 60 SQPLFEGGKLKAGVDFAQAGYVAAQANYRQTVLTAFQEVQNAVTGLSVLAEAAQQASAAV 119 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + +K +SL+ Y G +D+L E+ E + Q A V L A+G G+ Sbjct: 120 DDARKLVSLAQDRYAGGLTPFIDVLTAEQQLLTSERQAVQIQGQRAALVVFLAKALGGGW 179 Query: 451 N 451 + Sbjct: 180 D 180 >gi|317474315|ref|ZP_07933591.1| outer membrane efflux protein [Bacteroides eggerthii 1_2_48FAA] gi|316909625|gb|EFV31303.1| outer membrane efflux protein [Bacteroides eggerthii 1_2_48FAA] Length = 467 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 58/331 (17%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + ALQQN+TI + R+NA A+ ++ + +A LFPS AS+S R + PN +TN+ Sbjct: 48 LQTCIDYALQQNITIRK--NRLNAESAEVDVKTAKAALFPSLTASVSQRIVNRPNSETNT 105 Query: 117 ------------------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NVI 157 + +D++W + G +R +++ A++++A+ N I Sbjct: 106 IINGDNITSSQSKTSYNGSYGIDANWTL-YNGSKRLNTLKQQRMNNRIAELNVAESENSI 164 Query: 158 SKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + I Y+ + E + + LD+ + E + G+ +K L +LEA++ + + Sbjct: 165 EESITQIYVQILYAAEAVKVNETTLDVSQAECERARALLAAGSIAKSDLAQLEAQVSTDK 224 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP---- 268 + T + +TL Y L + + S + +LYIP N+ P Sbjct: 225 YQLVTAQ----------ATLQDYKLQ--LKQLLELSGEEEMDLYIPALGDENVLSPLPSK 272 Query: 269 ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPG 319 +D+ R+ RP+I + S I IA+S P++SL+ I T+ N Sbjct: 273 SDVYRSALTLRPEIEAGRLNVKASELDINIARSGYIPTVSLSAGIGSTNTNGNDFTFGEQ 332 Query: 320 YNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF+ + KS +++A+ Sbjct: 333 IKQNWNNSLGVTVSVPIFNNRQTKSAVQKAK 363 >gi|224588117|gb|ACN58743.1| outer membrane efflux protein [uncultured bacterium BLR2] Length = 473 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/344 (20%), Positives = 148/344 (43%), Gaps = 46/344 (13%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL------SVRAD--------- 95 +WW +ND +L+ L+ A+ Q I A RI AA++ + +R D Sbjct: 53 QWWRDYNDPTLDALIAKAIGQAPGISIADARIRAAQQEVRLAGASRGLRVDANAQFVRQR 112 Query: 96 -----LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQV 149 L P+ + N S + ++ D +G QR +E++L ++ A+ Sbjct: 113 LSDNGLLPAEFLGF------NWYDQSDVGVSVRYQFDWWGKQRAALEAALDRSRASAAER 166 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 A+L + + + +Y + + R ++ + + L ++ ++L+ + + S + L+ Sbjct: 167 RSAELGLAAAVSSAYFEWQACAARSTLLEESITLLERQLQLTQRRAAAQLDTVDSALSLQ 226 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + ++ L ++ V ++ LLG T+ L + + +P +P N+G A Sbjct: 227 QSLAVHREELAILAGQQQLQVIALAALLGTD-TQSLPALGVRELP-RPASALPDNVG--A 282 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---------DNSFPGY 320 +L+ RPDI ++ ++ +A++ YP +SL L+ D+ P Sbjct: 283 NLLARRPDIAASRWRVEAALRDTDVARASFYPDISLRALAGLSSIELGRLLRSDSGVP-- 340 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 +FG + LP+FD G ++ A +S + +TV+N Sbjct: 341 ----AFGFAVDLPLFDAGLRQARHGAARASLDVAIAAYDDTVVN 380 >gi|216880|dbj|BAA02064.1| fusA [Burkholderia cepacia] gi|242023|gb|AAC60388.1| FusA [Burkholderia cepacia] Length = 433 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 111/242 (45%), Gaps = 21/242 (8%) Query: 115 NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 N+TG L + +DL+G+ ++ E +L + A AKL + ++ +Y+ Sbjct: 42 NNTGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYAL 101 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +AH+ + + +L+ + G ++L + + E+ + E I + E++ ++ H + Sbjct: 102 LDLAHETFERQRSLADLARKRLQAGLGTQLEVSQAESTLPDYERQIDSYEEAIQLARHQL 161 Query: 234 STLLGY--PATEFLHYMQKQSNNFQPNLYIPINIGI----PADLIRNRPDIRYQEKKLAD 287 + L G A + + +P L + G+ PADL+ RPD+ + Sbjct: 162 AALAGKGPGAGDAIK---------RPRLSLDAPAGLPSAMPADLLGRRPDVVAARWTVDA 212 Query: 288 SVAKIGIAKSDLYPSLSL---NGSIALTHD--NSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 I +AK+ YP++ L G +T + N W+ GP L LPIF+ G++++ Sbjct: 213 QARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRA 272 Query: 343 NI 344 + Sbjct: 273 QL 274 >gi|23012324|ref|ZP_00052438.1| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 285 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 42/253 (16%) Query: 17 GCTVGPEYTKPHMPLLPTQF-------SIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 C + P+Y +P L PT F S K L N WW F LN LV AL Sbjct: 28 ACNMTPKYERPKQSL-PTSFRNPLPEPSPEMPKPLSN-----WWTIFGSEELNALVTEAL 81 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----------PNLKTNSTGQ 119 N + AT RI A+ S A L P+ AS R I PN TN + + Sbjct: 82 ANNHDLKAATARIVQAEAQAGSAGAALLPTITAS-GKRSIDSPQGGQGADPNPPTNRSHR 140 Query: 120 LDS-----DWKIDLFGQRRHIESSLANLDSAYAQV---DIAKLNVISKLIPSYIDARHFK 171 L S W+IDL+G+ R E+S +L +A+A + + L +IS ++ +YI Sbjct: 141 LSSAYVSASWEIDLWGKVRASEAS--SLATAFANLHDREAIGLTLISDVVLTYIQYLEGL 198 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP----TLEKSFR 227 +R ++A + K + + G +S L L + + E+ IP T E++F Sbjct: 199 DREAVARSNIANMKAMYKAVSERVRLGESSNLELAQQRNVLAQTEATIPPIILTRERAF- 257 Query: 228 MNVHNISTLLGYP 240 + ++ LLG P Sbjct: 258 ---NKLAVLLGKP 267 >gi|298376706|ref|ZP_06986661.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] gi|298266584|gb|EFI08242.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] Length = 430 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 128/270 (47%), Gaps = 20/270 (7%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N++ +Y A K + Q +D+ + + ++F G SK L+++E+ +K Sbjct: 135 NIVYSADLNYWTAAARKGMYDVMCQYVDIVGELANVLTIRFNDGQISKTDLLQVESRLKE 194 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E + + K +++ + N+++L+G + + ++ L +P+ +G L RN Sbjct: 195 AELNKSSAYKEYQIALQNLNSLMGVSPLDPIEV----EDSITTYLALPLQVGEDVAL-RN 249 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFG--PKL 330 RPD E + +I ++K+ PSL++ G+ N G + W+ L Sbjct: 250 RPDYAISELNIEYQKRQINLSKAKYNPSLAIGFQGTWGTPMLN-VKGSDQLWTPAVFASL 308 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDKKIVTK 385 +P+F G R E ++Q+ + +E L+ + EV NA TS+ E K +T Sbjct: 309 KIPLFRWGA-----RFKEVNSQKAILRSKEYALDNTRDKIAQEVANAWTSLTEYTKQITV 363 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + A ++ ++++ L+ +Y +G+ +LD+L Sbjct: 364 AEEACKIAEENLDLNTFSYNEGKLPILDVL 393 >gi|218130794|ref|ZP_03459598.1| hypothetical protein BACEGG_02388 [Bacteroides eggerthii DSM 20697] gi|217987138|gb|EEC53469.1| hypothetical protein BACEGG_02388 [Bacteroides eggerthii DSM 20697] Length = 446 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 58/331 (17%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + ALQQN+TI + R+NA A+ ++ + +A LFPS AS+S R + PN +TN+ Sbjct: 27 LQTCIDYALQQNITIRK--NRLNAESAEVDVKTAKAALFPSLTASVSQRIVNRPNSETNT 84 Query: 117 ------------------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NVI 157 + +D++W + G +R +++ A++++A+ N I Sbjct: 85 IINGDNITSSQSKTSYNGSYGIDANWTL-YNGSKRLNTLKQQRMNNRIAELNVAESENSI 143 Query: 158 SKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + I Y+ + E + + LD+ + E + G+ +K L +LEA++ + + Sbjct: 144 EESITQIYVQILYAAEAVKVNETTLDVSQAECERARALLAAGSIAKSDLAQLEAQVSTDK 203 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP---- 268 + T + +TL Y L + + S + +LYIP N+ P Sbjct: 204 YQLVTAQ----------ATLQDYKLQ--LKQLLELSGEEEMDLYIPALGDENVLSPLPSK 251 Query: 269 ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPG 319 +D+ R+ RP+I + S I IA+S P++SL+ I T+ N Sbjct: 252 SDVYRSALTLRPEIEAGRLNVKASELDINIARSGYIPTVSLSAGIGSTNTNGNDFTFGEQ 311 Query: 320 YNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF+ + KS +++A+ Sbjct: 312 IKQNWNNSLGVTVSVPIFNNRQTKSAVQKAK 342 >gi|262381490|ref|ZP_06074628.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] gi|262296667|gb|EEY84597.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] Length = 430 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 128/270 (47%), Gaps = 20/270 (7%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N++ +Y A K + Q +D+ + + ++F G SK L+++E+ +K Sbjct: 135 NIVYSADLNYWTAAARKGMYDVMCQYVDIVGELANVLTIRFNDGQISKTDLLQVESRLKE 194 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E + + K +++ + N+++L+G + + ++ L +P+ +G L RN Sbjct: 195 AELNKSSAYKEYQIALQNLNSLMGVSPLDPIEV----EDSITTYLALPLQVGEDVAL-RN 249 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFG--PKL 330 RPD E + +I ++K+ PSL++ G+ N G + W+ L Sbjct: 250 RPDYAISELNIEYQKRQINLSKAKYNPSLAIGFQGTWGTPMLN-VKGSDQLWTPAVFASL 308 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDKKIVTK 385 +P+F G R E ++Q+ + +E L+ + EV NA TS+ E K +T Sbjct: 309 KIPLFRWGA-----RFKEVNSQKAILRSKEYALDNTRDKIAQEVANAWTSLTEYTKQITV 363 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + A ++ ++++ L+ +Y +G+ +LD+L Sbjct: 364 AEEACKIAEENLDLNTFSYNEGKLPILDVL 393 >gi|255013364|ref|ZP_05285490.1| outer membrane efflux protein [Bacteroides sp. 2_1_7] Length = 430 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 129/273 (47%), Gaps = 20/273 (7%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N++ +Y A K + Q +D+ + + ++F G SK L+++E+ +K Sbjct: 135 NIVYSADLNYWTAAARKGMYDVMCQYVDIVGELANVLTIRFNDGQISKTDLLQVESRLKE 194 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E + + K +++ + N+++L+G + + ++ L +P+ +G L RN Sbjct: 195 AELNKSSAYKEYQIALQNLNSLMGVSPLDPIEV----EDSITTYLALPLQVGEDVAL-RN 249 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFG--PKL 330 RPD E + +I ++K+ PSL++ G+ N G + W+ L Sbjct: 250 RPDYAISELNIEYQKRQINLSKAKYNPSLAIGFQGTWGTPMLN-VKGSDQLWTPAVFASL 308 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDKKIVTK 385 +P+F G R E ++Q+ + +E L+ + EV NA TS+ E K +T Sbjct: 309 KIPLFRWGA-----RFKEVNSQKAILRSKEYALDNTRDKIAQEVANAWTSLTEYTKQITV 363 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + A ++ ++++ L+ +Y +G+ +LD+L + Sbjct: 364 AEEACKIAEENLDLNTFSYNEGKLPILDVLSAQ 396 >gi|160889740|ref|ZP_02070743.1| hypothetical protein BACUNI_02170 [Bacteroides uniformis ATCC 8492] gi|156860732|gb|EDO54163.1| hypothetical protein BACUNI_02170 [Bacteroides uniformis ATCC 8492] Length = 449 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 66/335 (19%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + ALQQN+TI + R+NA A+ ++ + RA LFPS AS+S R + P +TN+ Sbjct: 30 LQACIDYALQQNITIRK--NRLNAESAQVDVKTARAALFPSLSASVSQRVVNRPKSETNT 87 Query: 117 ------------------TGQLDSDWKIDLFGQR------RHIESSLANLDSAYAQVDIA 152 + +D++W + G+R + + + +A L A ++ I Sbjct: 88 IIDGDNITSSQSKTSYNGSYGIDANWTLYNGGKRLNTIKQQQLNNRIAELSVAQSENSIE 147 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + +Y+ + E + + L++ + E + G+ +K L +LEA++ Sbjct: 148 E-----SIAQTYVQILYAAEAVKVNESTLEVSQAECERARQLLEAGSIAKSDLAQLEAQV 202 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP 268 + + + T + +TL Y + NLYIP N+ P Sbjct: 203 STDKYQLVTAQ----------ATLQDYKLQLKQLLELDGESEM--NLYIPTLGTENVLAP 250 Query: 269 ----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---- 316 D+ R+ RP+I + + S I IA++ P+LSL+ I +H N Sbjct: 251 LPTKTDVYRSALVLRPEIEAGKLNIQTSDLDIKIARAGYLPTLSLSAGIGTSHANGNDFT 310 Query: 317 -FPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF + KS + +A+ Sbjct: 311 FSEQVKQNWNNSLGFTVSVPIFSNRQTKSAVEKAK 345 >gi|189346799|ref|YP_001943328.1| outer membrane efflux protein [Chlorobium limicola DSM 245] gi|189340946|gb|ACD90349.1| outer membrane efflux protein [Chlorobium limicola DSM 245] Length = 446 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 6/184 (3%) Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVA-KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 ++ I + RN PD+ ++ +KLAD A+ LYP+++ + D G Sbjct: 251 SMAIEVAIARN-PDM-HRSRKLADRAGYSADAARGALYPAITAKAGLGY-RDRDIGGGAR 307 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ G +L LPIFD G +++ I +A+ + E + + L ++ L++ Sbjct: 308 EWTAGLQLDLPIFDGGALRAGIAKADGALAESRESERSVRLAVQSQLRQELSAWRTAAAD 367 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL--SIAKRQLAKSYV 440 V A+ ++S+ S YR G+ + LDIL + ++ E + ++A +A++ V Sbjct: 368 VRSADEAIAAARESLDASQALYRAGKATALDILTAQLGLSRAETERAGALAGYAIARAGV 427 Query: 441 DLYI 444 DL I Sbjct: 428 DLLI 431 >gi|150007948|ref|YP_001302691.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] gi|256840886|ref|ZP_05546394.1| outer membrane efflux protein [Parabacteroides sp. D13] gi|301310009|ref|ZP_07215948.1| outer membrane efflux protein [Bacteroides sp. 20_3] gi|149936372|gb|ABR43069.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] gi|256738158|gb|EEU51484.1| outer membrane efflux protein [Parabacteroides sp. D13] gi|300831583|gb|EFK62214.1| outer membrane efflux protein [Bacteroides sp. 20_3] Length = 430 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 128/270 (47%), Gaps = 20/270 (7%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N++ +Y A K + Q +D+ + + ++F G SK L+++E+ +K Sbjct: 135 NIVYSADLNYWTAAARKGMYDVMCQYVDIVGELANVLTIRFNDGQISKTDLLQVESRLKE 194 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 E + + K +++ + N+++L+G + + ++ L +P+ +G L RN Sbjct: 195 AELNKSSAYKEYQIALQNLNSLMGVSPLDPIEV----EDSITTYLALPLQVGEDVAL-RN 249 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNSFPGYNTHWSFG--PKL 330 RPD E + +I ++K+ PSL++ G+ N G + W+ L Sbjct: 250 RPDYAISELNIEYQKRQINLSKAKYNPSLAIGFQGTWGTPMLN-VKGSDQLWTPAVFASL 308 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDKKIVTK 385 +P+F G R E ++Q+ + +E L+ + EV NA TS+ E K +T Sbjct: 309 KIPLFRWGA-----RFKEVNSQKAILRSKEYALDNTRDKIAQEVANAWTSLTEYTKQITV 363 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + A ++ ++++ L+ +Y +G+ +LD+L Sbjct: 364 AEEACKIAEENLDLNTFSYNEGKLPILDVL 393 >gi|319790104|ref|YP_004151737.1| outer membrane efflux protein [Thermovibrio ammonificans HB-1] gi|317114606|gb|ADU97096.1| outer membrane efflux protein [Thermovibrio ammonificans HB-1] Length = 452 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 83/382 (21%), Positives = 169/382 (44%), Gaps = 42/382 (10%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-- 111 +SF T+ +++ K+ ++NL +L A E++ A + + P ++S F N Sbjct: 17 QSFAFTA-DEVAKLVRERNLQVLAAKEQLKGALFQEKATKKSFLPQ--LTLSGSFFENYQ 73 Query: 112 ------------LKTNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVIS 158 L T QL + ++D R +E ANL + LN+ Sbjct: 74 SAFPKGWQQSYTLSATVTDQLVNFQQLDQLKIDRTQVEIQKANLSGTLLEQLYQALNL-- 131 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +++A +E++ I ++L+ ++ +++ K+ +G L+K +AE+ S + Sbjct: 132 -----FLEAGAQREKVKIRKELLNSAQQIFKVAQKKYREGLVMVTDLLKAKAEVDSAKRA 186 Query: 219 IPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + E +R ++ ++ LL G P E + ++ N + L +++ Sbjct: 187 LVEEENRYRKTLNRLNELLNTRLKGEP--EVCFFTEELKINRKELLKRALSL-------- 236 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP 333 RP+++ QEK + S ++ + L P+L+L+ S++ T P T S G + P Sbjct: 237 -RPELKQQEKGVKLSKLQVQQIQDTLKPNLNLSVSVSRTGTQFLPSDKT-VSAGITINFP 294 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G K+ AES + + QE +EV NA+ + + + + ++ + Sbjct: 295 VFDSGVTKARALSAESGVKVAQLQLQELKNRIKREVLNAVADVESGYQRLKAAESSLNFY 354 Query: 394 KKSMSLSMINYRQGRYSLLDIL 415 +K+ S S+ YR G ++ +L Sbjct: 355 RKAYSRSLNEYRLGVTDIVSLL 376 >gi|54303518|ref|YP_133511.1| hypothetical protein PBPRB1861 [Photobacterium profundum SS9] gi|46916948|emb|CAG23711.1| hypothetical protein PBPRB1861 [Photobacterium profundum SS9] Length = 478 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 106/469 (22%), Positives = 189/469 (40%), Gaps = 47/469 (10%) Query: 10 LFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 L + +L+GC++ P H +L T I + I +WW F D L +L+++ L Sbjct: 14 LSLSVLSGCSMTPPEEPQHQSML-TNEQIQLKSHDIQAIHRQWWNQFGDQQLTQLIQLGL 72 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDW----- 124 NLT+ QA +RI A + + + P ++S I T S ++D+ Sbjct: 73 TNNLTLQQAKQRIALATQQVALAESGDKPKLNLNVSGGGI-GANTQSFNMSNADYSAIGM 131 Query: 125 -------KIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 + D +G+ ++ ++ S AQ A+L + + + SY ++ Sbjct: 132 LLPSFSYQFDFWGKNEATITAASDQKLSLQAQEAQARLVISASIASSYFALQNNYRLEQN 191 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 +LD E++H A K L EAE + DI TL + T Sbjct: 192 LTTLLD------EINHQNKVITAQVKRGLAS-EAESFQNQGDIDTLSAQLS----DAKTQ 240 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIP----INI-----GIPADLIRNRPDIRYQEKKLAD 287 + Y+ K + L +P IN IP +L+ RPDI + + Sbjct: 241 QQLAKNQLALYLAKTPDQL-GQLTLPNAQAINQLAAVDTIPMNLLGRRPDIIASKWMVEA 299 Query: 288 SVAKIGIAKSDLYPSLSLN--GSIA----LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + I AK+ YP ++L G + N F G T LP++D G Sbjct: 300 NEQGIKQAKASYYPDVNLMVMGVFQKLSNMNPANLFLGGAT-----VAASLPLYDGGVRD 354 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N A + + +TVLNA+K+ +A+ S+ E +K Q +V ++++ + Sbjct: 355 ANYASANIQFDQAVTNYNQTVLNAVKQTSDAIVSLQEAQKQQVLAQSSVTHYQQAYDILN 414 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y +G S D+ + V ++ + + ++ + L +A+G Y Sbjct: 415 NRYERGLSSFADMNSARMQWHQQVVKVTNTESAILQNQLQLIVALGGDY 463 >gi|76817856|ref|YP_337250.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|76582329|gb|ABA51803.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] Length = 527 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 181/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA L+ RPDI ++ A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAGLLGRRPDIVAARLRVEAVYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|167835621|ref|ZP_02462504.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 240 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 28/228 (12%) Query: 13 VLLAGCTVGPEYTKPHMPL------------LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 +L AGCT+ P Y +P P+ P S S N + + W E F D Sbjct: 4 LLAAGCTLAPRYERPAAPVSGAFPTDGVYAAQPGAASGARSANGQSAVDIGWREFFVDPR 63 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNST 117 L +L++ AL+ N + + + A++ RA LFP+ + R+ + T T Sbjct: 64 LQRLIETALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLDGTGTGTIQRYPAGVST--T 121 Query: 118 GQ----------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 GQ + + W++DLFG+ + + + +LA + A++++++++ Y+ Sbjct: 122 GQPLITRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVAQVADQYLT 181 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + I L + + +L+ L+F G S+L L + + +++ Sbjct: 182 LLSTNDLLQITQNTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVET 229 >gi|76819273|ref|YP_335529.1| RND efflux system outer membrane lipoprotein [Burkholderia pseudomallei 1710b] gi|76583746|gb|ABA53220.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 1710b] Length = 527 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 97/440 (22%), Positives = 181/440 (41%), Gaps = 55/440 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGFTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIA 431 + ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQAR 479 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 480 RRTL---RVGLIGALGGGFD 496 >gi|103487743|ref|YP_617304.1| Type I secretion outer membrane protein, TolC [Sphingopyxis alaskensis RB2256] gi|98977820|gb|ABF53971.1| Type I secretion outer membrane protein, TolC [Sphingopyxis alaskensis RB2256] Length = 497 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 48/347 (13%) Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 +E+ ANL + A ++ S+++ +Y+D + + + + + + + N++ + Sbjct: 124 RVEAGQANLRATEA-------SIFSQVVGAYMDVIRDQAIVQLNQKNVAVLRTNLQATSD 176 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 +F G ++ + + EA + E D+ T E + + L+G + + Sbjct: 177 RFEIGDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNL 236 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS--LNGS--- 308 + I + N PDI ++++ S A IG AKS P +S L+G Sbjct: 237 PATAEEAVAI-------ALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNN 289 Query: 309 IALTHDNSFPGYN-----THWSFGPKLYLPIFDKGKIKSNIRRAES---SAQEQYITWQE 360 + ++ PG + + + G ++ LPIF G+ + +R+A+S A EQY+ + Sbjct: 290 FLGSLNSGVPGVSVTQETSSAAAGVEVTLPIFTAGRRSAQVRQAQSRSSQAIEQYVEVER 349 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V I + A + +++I+ + AV + S+ G S+LDIL+ E+ Sbjct: 350 GV---IAQTRGAYAAWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDILNAEQE 406 Query: 421 TAKVEVDLSIAKRQLAKSYV---------------DLYIAIGSGYNP 452 +V L A+R SYV DL I G+ Y+P Sbjct: 407 YLNTQVQLVSAQR---NSYVAAFSLLAAMGKAEARDLGIEGGALYDP 450 >gi|333012702|gb|EGK32082.1| outer membrane efflux family protein [Shigella flexneri K-227] Length = 340 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/337 (19%), Positives = 152/337 (45%), Gaps = 22/337 (6%) Query: 126 IDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 +DL+G R + +++ ++A A+ +L++ + + Y + + + + Q D+ Sbjct: 7 LDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVI 66 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ K G +++ A+I +++ I ++ ++ L+G A++ Sbjct: 67 DYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDM 126 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 +P + GIPA +L+ RPD++ + S+ ++ A++ Y Sbjct: 127 --------PEIKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFY 178 Query: 301 PSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 PS + G A+ D F + ++F P L LP+FD G++ +N+ +++ Sbjct: 179 PSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIER 238 Query: 358 WQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + ++VLNA+++V L ++N+++++ + +H VE + + + Y++G S L Sbjct: 239 YNQSVLNAVRDVAVNGTRLQTLNDEREM--QAEH-VEATRFTQRAAEAAYQRGLTSRLQA 295 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + E+ L + + + L ++G GY Sbjct: 296 TEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ 332 >gi|283954111|ref|ZP_06371636.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 414] gi|283794390|gb|EFC33134.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 414] Length = 456 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 96/434 (22%), Positives = 195/434 (44%), Gaps = 67/434 (15%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK----NLINIDTLKWWESF 56 M I+ +IF F + L+ C G + + LP + S+ + NL T W++S+ Sbjct: 1 MKIILSIF--FSIFLSAC--GAKLS------LPKEISLTQEQMKDLNL----TYDWYKSY 46 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSV--RADLFPSS-YASISHR--FIPN 111 ++ LN+ + L N IN A++ +LS RADL Y ++S F + Sbjct: 47 DNVKLNEFLNFVLLNN-------SDINIARKTLLSALARADLINYDLYLTLSGNLGFGGD 99 Query: 112 LKTNSTGQ-------LDSDWKIDLFGQRRHIES-SLANLDSAYAQVDIAKLNVISKLIPS 163 NS Q L+ +++D++G+ R S S N ++ ++ K+++I+ + Sbjct: 100 KDLNSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFNAKASAYDLENLKISMINTALND 159 Query: 164 YIDARHFKERISIAHQILDLYKKNIE----LSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +F + ++L Y N+E L K+ G +L L+ +E + + ++ Sbjct: 160 VFELAYFND----VDKLLQTYFANLEQMKELYSYKYELGKIEELDLLNIEQSLLRAKQNL 215 Query: 220 PTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPD 277 +++ + + N+ LL ++ Y + S N+F+ + N IP + R D Sbjct: 216 LNNDQNRNLLIKNLQDLLAKQEGFTYIEYFKTLSLNDFKT---LNPNFNIPLKALAYRAD 272 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFD 336 +R + L + + + PS+SL G+++ + N + S K+ LP D Sbjct: 273 VRSKLNSLKSAFKDYSSMQKSILPSISLGGALSGSDKNFDDSFKFEILSGNVKISLPFLD 332 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKE--------------VENALTSINEDKKI 382 G++K NI+ ++ + ++ I++++ + +A+ E ++N L +IN ++ Sbjct: 333 YGRVKQNIKISQFTYEQLLISYEQALQSAMNEFVLNYKDYQSNTLLLQN-LQNINTKQEF 391 Query: 383 VTKLQHAVELHKKS 396 +TK H + KS Sbjct: 392 ITKTYHEKYILGKS 405 >gi|167762479|ref|ZP_02434606.1| hypothetical protein BACSTE_00834 [Bacteroides stercoris ATCC 43183] gi|167699585|gb|EDS16164.1| hypothetical protein BACSTE_00834 [Bacteroides stercoris ATCC 43183] Length = 467 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 58/332 (17%) Query: 60 SLNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTN 115 +L + ALQQN+TI + R+NA A+ ++ + RA LFPS AS+S R + PN +TN Sbjct: 47 NLQACIDYALQQNITIRK--NRLNAKSAEVDVKTARAALFPSLTASVSQRIVNRPNSQTN 104 Query: 116 S------------------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NV 156 + + +D++W + G +R +++ A++ +A+ N Sbjct: 105 TIIDGDNITSSQSKTSYNGSYGIDANWTL-YNGSKRLNTLKQQRMNNRIAELGVAESENT 163 Query: 157 ISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 I + I Y+ + E + + LD+ + E + G+ ++ L +LEA++ + Sbjct: 164 IEESITQIYVQILYAAEAVKVNEATLDVSRAECERARALLAAGSIARSDLAQLEAQVSTD 223 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP--- 268 + + T + +TL Y LYIP N+ P Sbjct: 224 KYQLVTAQ----------ATLQDYKLQLKQLLELDGEKEM--TLYIPTLGDENVLSPLPS 271 Query: 269 -ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FP 318 D+ R+ RP+I + S I IA+S P++SL+ I T+ N Sbjct: 272 KTDVYRSALTLRPEIEAGRLNVKASELDIDIARSGYIPTISLSAGIGSTNTNGNDFTFGE 331 Query: 319 GYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF+ + KS +++A+ Sbjct: 332 QIKQNWNNSLGVTVSVPIFNNRQTKSAVQKAK 363 >gi|296105223|ref|YP_003615369.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059682|gb|ADF64420.1| Cu(I)/Ag(I) efflux system outer membrane protein CusC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 254 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 16/240 (6%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ ++ ++ + W F D + +L+ Sbjct: 12 IFILAGCVSLAPEYQRPAAPV-PQQFSLSHNSLTPAVNGYQDTGWRNFFVDPQVTRLIGE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLD 121 AL N + A ++ A+ AD +P AS + LK + +L+ Sbjct: 71 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDARLE 130 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAK---LNVISKLIPSYIDARHFKERISIAH 178 +++D FG+ +++ S A+ + +A + + + ++S + SY + E++ IA Sbjct: 131 LSYELDFFGKLKNM--SDADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIAR 188 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 189 ETLKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG 248 >gi|330897948|gb|EGH29367.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 435 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/340 (23%), Positives = 149/340 (43%), Gaps = 38/340 (11%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRF 108 L L++ AL N + A R+ + RAD FP+ A + R+ Sbjct: 25 LRGLLQSALAFNRDLRVAVLRVEETRAMRGITRADRFPTLAAGVERDRQHFDNAAADERY 84 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYID 166 ++ S G SD+++D FG+ R + + + L S Y Q+ A+ +I+++ +++ Sbjct: 85 GQDISIASVGV--SDFELDFFGRVRSLSEAARHDYLASTYGQL-AARSALIAEVARAWLA 141 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATS-------KLSLVKLEAEIKSIESDI 219 R A + + ++ + + QGA S +L + + +++ SD Sbjct: 142 ERLTAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMAQRLDTLTAQQQVQDAASDH 201 Query: 220 PTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ + + ST L P T L ++ + NL P+ + R D Sbjct: 202 ANASQALLL-LTGYSTALPATKPDTPALTAALVETPAWLSNL--------PSQRLLERFD 252 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLPI 334 IR +E+ L S A IG A++ +PS+ L+ + L D+ F + W P+L LP+ Sbjct: 253 IRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLSTPQLNLPL 312 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 FD G+ ++N+ A+ Q +++ V NA +E+ LT Sbjct: 313 FDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 352 >gi|295815575|gb|ADG36297.1| SilC [Morganella sp. RP-42] Length = 259 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 112/238 (47%), Gaps = 12/238 (5%) Query: 12 IVLLAGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK---WWESFNDTSLNKLVKI 67 I +LAGC ++ PEY +P P+ P QFS+ + ++ + W F D + +L+ Sbjct: 12 IFILAGCVSLAPEYQRPAAPV-PQQFSLSRNSLTPAVNGYQDTGWRNFFVDPQVTRLITE 70 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN--STGQLDS--- 122 AL N + A ++ A+ AD +P AS + LK + +T + D+ Sbjct: 71 ALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTTQEYDAGLE 130 Query: 123 -DWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 +++D FG+ +++ ++ N ++ ++ ++S + SY + E++ IA + Sbjct: 131 FSYELDFFGKLKNMSDADRQNYFASEEARRAVRILLVSNVSQSYFSQQLAYEQLRIARET 190 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 L Y+++ + G+T+ L+L + +I+S ++I E + + +LG Sbjct: 191 LKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAHANNALQLVLG 248 >gi|148925965|ref|ZP_01809652.1| putative outer membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145844951|gb|EDK22055.1| putative outer membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 463 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/407 (20%), Positives = 181/407 (44%), Gaps = 41/407 (10%) Query: 2 NILRAIFSLFIVL-LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 N ++ I S+F+ L+ C V K + L Q N T W+ S+++ Sbjct: 6 NKMKIILSIFLAFFLSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 57 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 58 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLS 110 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 111 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 169 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 170 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 229 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 230 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 286 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 287 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 344 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ + ++ I++++ + +A+ E D ++ LQ+ Sbjct: 345 QNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQN 391 >gi|90407717|ref|ZP_01215896.1| hypothetical protein PCNPT3_07955 [Psychromonas sp. CNPT3] gi|90311186|gb|EAS39292.1| hypothetical protein PCNPT3_07955 [Psychromonas sp. CNPT3] Length = 464 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 101/467 (21%), Positives = 199/467 (42%), Gaps = 51/467 (10%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNL 73 +L+GC++ P LL +Q + S +N+ +WW FND L +L+ + NL Sbjct: 17 ILSGCSMSPPEAPVQKKLLTSQ-QVKLSSIEMNVIHEQWWAQFNDPQLTQLINLGFNNNL 75 Query: 74 TILQATERINAAKENI------------LSVRADLFPSSYASISHRFIPNLKTNSTGQL- 120 T+ QA +++ A + I L++ A F ++ S + + K + G L Sbjct: 76 TLQQAQQKVELASQQIALAEAGNQVKVNLNISAGGFGTNAGSFN---LDGAKYSGLGMLL 132 Query: 121 -DSDWKIDLFGQRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ++ D +G+ I ++ +N S A+ + AK + + + SY+ + ++ Sbjct: 133 PSFSYQFDFWGKHDAIIAAASNQKKSVQAKQEQAKQIIAASITNSYL-------YLQSSY 185 Query: 179 QI---LDLYKKNIELSHLKFTQGATSKLSLVKLE----AEIKSIESDIPTLEKSFRMNVH 231 QI L++ IE ++ + L++ E +I ++ + I T + ++ + Sbjct: 186 QIEKNLNVLLNEIEQQNIVIIKQVKRGLAVPSDELLNQGDIDTLLAQISTEKTHQKLAKN 245 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ LG + + + + +P I +P L+ R DI + + S + Sbjct: 246 QLALYLGTTPDQLISLVAPTAKPIKPLNSI---TAVPMSLLERRSDIIASKWLVEMSQQQ 302 Query: 292 IGIAKSDLYPSLSLN--GSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + AK YP ++L G + ALT+ N P S LPI+D G +N A Sbjct: 303 VTQAKLAYYPDVNLMAVGVVQALTNLN--PSRLLIGSATAGTNLPIYDGGVRDANYTSAN 360 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +TVL A+K+ +A+ ++ E + + AV ++ + L Y++G Sbjct: 361 IKFDSAVLDYNQTVLTAVKQASDAIINLQEAHRQLALSTSAVTHYQDAFELINKRYKRGL 420 Query: 409 YSLLD-----ILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 S + +L ++ +V D + + QL L A+G Y Sbjct: 421 ISFFEMNAARMLWHKQVIIEVNADAHVLQNQL-----QLISALGGSY 462 >gi|183222376|ref|YP_001840372.1| hypothetical protein LEPBI_I3030 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912423|ref|YP_001963978.1| TolC-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777099|gb|ABZ95400.1| TolC-related protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780798|gb|ABZ99096.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 451 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/312 (23%), Positives = 146/312 (46%), Gaps = 13/312 (4%) Query: 129 FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 F + IE + A L +A ++ ++L + +L +Y A + KE ++ +I + KN Sbjct: 132 FRDKSGIEKTEALLQAAKQTLNDSRLKICFELKSAYTQALYAKELHQLSLKIKERRIKNR 191 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 +L L++ G K S + E+ +K E ++ E+ F+ N I ++ P + Sbjct: 192 DLVKLRYEVGREHKGSFLLSESFVKQSEYEVSFAERLFQTNWKEIERVIASP----IEVT 247 Query: 249 QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 + ++P L + ++L+ P I ++ K+ + A IG+A++ YP L+L+ + Sbjct: 248 LDSTLLYEPILEKKFSEKEKSNLLDLHPSIMAEQSKVRAAQANIGVAEAGFYPDLNLSAT 307 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK- 367 I D P ++SFG L P+F+ G+ N++ A++ E+ I +++ N + Sbjct: 308 ITRQDDVWLPK-PRNYSFGINLSYPLFNGGRDYYNVKIAKTE-YEKSIHTRDSKKNMLSF 365 Query: 368 EVENA---LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 +E + +++E ++T+ A E+ +++ Y G S + IE Sbjct: 366 SLEQSYLNFKNVSEQLLVLTEFYKASEIR---ATIARSQYSNGLISFENWDLIENDLINR 422 Query: 425 EVDLSIAKRQLA 436 E +L I KR L Sbjct: 423 EKNLLIGKRDLG 434 >gi|57238196|ref|YP_178723.1| outer membrane efflux protein [Campylobacter jejuni RM1221] gi|57167000|gb|AAW35779.1| outer membrane efflux protein [Campylobacter jejuni RM1221] gi|315058022|gb|ADT72351.1| Outer membrane efflux protein [Campylobacter jejuni subsp. jejuni S3] Length = 456 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 86/407 (21%), Positives = 180/407 (44%), Gaps = 42/407 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C V K + L Q N T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ ++ I++++T+ +A+ E D ++ LQ+ Sbjct: 338 QNIKISQFIYEQLLISYEQTLQSAMNEFALNYKDYQSDTLLLQNLQN 384 >gi|317478780|ref|ZP_07937932.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] gi|316905040|gb|EFV26842.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] Length = 466 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 66/335 (19%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + ALQQN+TI + R+NA A+ ++ + RA LFPS A++S R + P +TN+ Sbjct: 47 LQACIDYALQQNITIRK--NRLNAESAQVDVKTARAALFPSLSANVSQRVVNRPKSETNT 104 Query: 117 ------------------TGQLDSDWKIDLFGQR------RHIESSLANLDSAYAQVDIA 152 + +D++W + G+R + + + +A L A ++ I Sbjct: 105 IIDGDNITSSQSKTSYNGSYGIDANWTLYNGGKRLNTIKQQQLNNRIAELSVAQSENSIE 164 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + +Y+ + E + + L++ + E + G+ +K L +LEA++ Sbjct: 165 E-----SIAQTYVQILYAAEAVKVNESTLEVSQAECERARQLLEAGSIAKSDLAQLEAQV 219 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP 268 + + + T + +TL Y + NLYIP N+ P Sbjct: 220 STDKYQLVTAQ----------ATLQDYKLQLKQLLELDGESEM--NLYIPTLGTENVLAP 267 Query: 269 ----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---- 316 D+ R+ RP+I + + S I IA++ P+LSL+ I +H N Sbjct: 268 LPTKTDVYRSALVLRPEIEAGKLNIQTSDLDIKIARAGYLPTLSLSAGIGTSHANGNDFT 327 Query: 317 -FPGYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF + KS + +A+ Sbjct: 328 FSEQVKQNWNNSLGFTVSVPIFSNRQTKSAVEKAK 362 >gi|167719888|ref|ZP_02403124.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei DM98] Length = 247 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 101/194 (52%), Gaps = 17/194 (8%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGY 320 +PA+L+ RPDI + + D+ A+ I +AK+ YP++ SL G +++ Sbjct: 1 MPAELLGRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAM 59 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSIN 377 N WS GP L LPIF+ G++++ + A + + + +T++ A+K++ + L S++ Sbjct: 60 NGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLD 119 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVEVDLSIAKRQL 435 +K + AV L ++S LS + +G +++L + TA+ E I +L Sbjct: 120 SQQKDAAR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQ-ENQTRIEAARL 175 Query: 436 AKSYVDLYIAIGSG 449 A ++ L +A+G G Sbjct: 176 A-AHASLMVALGGG 188 >gi|218887453|ref|YP_002436774.1| outer membrane efflux protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758407|gb|ACL09306.1| outer membrane efflux protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 482 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 82/417 (19%), Positives = 171/417 (41%), Gaps = 47/417 (11%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 + + V+ AL+ N ++ A +AA+E S R P+ S + + + + +L Sbjct: 74 MRRAVESALRDNQGVVSARAGRDAAEEGRKSARGAFGPAVSTSYGYNRLNEKPRSMSREL 133 Query: 121 DSD---WKID----LFG--------QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 D D W + LF Q+ +E+ +L +D ++L++ ++ +++ Sbjct: 134 DDDTYTWTVGVSQPLFTGLRLLSTYQKAALETERKSL-----TLDKSRLDLAVQVQEAFL 188 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 E + A L ++ +++ + G +L +++ E ++ + ES + T E + Sbjct: 189 AHLKSGENVRSARDALSRLREQAKVTRAFYDVGLRPRLDVLQAEVDVTNAESLLITAENN 248 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI-----RNRPDIRY 280 ++TLL P Y+ +P+ + + RNRPD+R Sbjct: 249 HATQRARLNTLLTLPVDSDTAYV---------GTLVPVGFDMTLEQCLERAYRNRPDVRI 299 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-------FPGYNTHWSFGPKLYLP 333 K + + + IA S LYP +S N + A D+ P + WS G K Sbjct: 300 AGKAVEIAGKDVRIADSGLYPQVSANFNWATEGDHPEASGSTLSPNGFSQWSTGLKAEWS 359 Query: 334 IFDKGKI---KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +F+ GK R+ E+ + + + V EV++ L ++ + K + + Sbjct: 360 VFEWGKTWYSGQQARQVETQVRAEEANLRHEV---AYEVQSRLLTLTDSSKRIAVATKGL 416 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +++ +++ Y+ + D+LD + E L+ AK + + L+ A+G Sbjct: 417 VQAEEAYRVAVARYQAQVGTNTDVLDAQAKLTAAEAALTGAKAEYLDALSKLWAAMG 473 >gi|328953898|ref|YP_004371232.1| outer membrane efflux protein [Desulfobacca acetoxidans DSM 11109] gi|328454222|gb|AEB10051.1| outer membrane efflux protein [Desulfobacca acetoxidans DSM 11109] Length = 450 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 86/424 (20%), Positives = 191/424 (45%), Gaps = 49/424 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF---IPNLKTN- 115 SL++ + +AL+ + I++ ER AAK I RA+L P + S S+ + +P+ N Sbjct: 43 SLDEAINVALKNHPAIVEYKERSLAAKSQIGVSRANLLPQATHSTSYYYGNSVPSTGINL 102 Query: 116 --------STGQLDSDWKIDL---------FGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 S+ + SD+ + FG+ +L + + AQ +++K+++ + Sbjct: 103 PSGGPAFASSSGVISDYVVHRNTVNQLLYDFGK------TLGQIGQSKAQYEVSKMDLAN 156 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ-------GATSKLSLVKLEAE 211 +DA++ A + + + ++N+ L+ Q G +K+ + EA Sbjct: 157 TRQQVVLDAKNAFYGYLAAQRAVKVSEENVRLNEDLVRQAKGFYQVGVKAKIDVTTAEAN 216 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLG---YPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + + ++D+ T +F+++ ++ T LG +P + + QP L I++ Sbjct: 217 LYNAQADLITARNTFQISQVSLMTALGLKSWPYAGLTFQL-----DTQPKL---IDLNEA 268 Query: 269 AD-LIRNRPD-IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF 326 D +RP+ ++ Q ++ AD A + AK+ +P+L+ G + T ++ G WS Sbjct: 269 KDKAFSSRPEYLKNQFQQKADQEA-LRSAKAGYFPTLTSQG-VQNTQGKAYGGMRDTWSV 326 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 ++ P+F+ +R+A++S + + + K+VE + + + + Sbjct: 327 SVQMNFPLFEGLATTYAVRQAKASLRATESNTEVLRQDINKQVEQSYLDVGAAAERIRST 386 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + A + +++ L+ Y+ G S++++ D + + E++ + L + L AI Sbjct: 387 EKAKQAARENWDLAQGRYKAGVGSIIEVTDAQVKFFQAELNYIRSVYDLKTAEAGLERAI 446 Query: 447 GSGY 450 G Y Sbjct: 447 GKAY 450 >gi|167846021|ref|ZP_02471529.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei B7210] Length = 227 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 21/209 (10%) Query: 256 QPNLYIPINIGIP----ADLIRNRPDIRYQEKKLADSVAK-IGIAKSDLYPSL----SLN 306 +P L + N +P A+L+ RPDI + + D+ A+ I +AK+ YP++ SL Sbjct: 1 RPKLALDANAALPSALPAELLGRRPDI-VAARWMVDAQARGIDVAKAAFYPNVDLIASLG 59 Query: 307 G-SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 G +++ N WS GP L LPIF+ G++++ + A + + + +T++ A Sbjct: 60 GFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGA 119 Query: 366 IKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA-- 420 +K++ + L S++ +K + AV L ++S LS + +G +++L + Sbjct: 120 LKDIADNVVRLHSLDSQQKDAAR---AVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLL 176 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 TA+ E I +LA ++ L +A+G G Sbjct: 177 TAQ-ENQTRIEAARLA-AHASLMVALGGG 203 >gi|304319811|ref|YP_003853454.1| Outer membrane efflux protein [Parvularcula bermudensis HTCC2503] gi|303298714|gb|ADM08313.1| Outer membrane efflux protein [Parvularcula bermudensis HTCC2503] Length = 511 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 102/446 (22%), Positives = 191/446 (42%), Gaps = 55/446 (12%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSS---YASIS 105 T W D + +V AL +N + + ++ A N RA L P + + + S Sbjct: 59 TENWLADLGDARADAVVAEALARNKDLENSASQVGAILANARVTRASLLPQAQFGFTASS 118 Query: 106 HR-------FIPNLKTNSTGQLDSD-----------WKIDLFG----QRR--HIESSLAN 141 R F P G S W++D++G Q R +++ A Sbjct: 119 VRTPAGDPQFNPETGEFEGGGEASSSDSYRLSTSLSWELDVWGRLTDQTRAAYLDVEAAR 178 Query: 142 LDSAYAQVDIAKLNV--ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 LD A AQ+ +A V + L + + R ER ++ + N+ + ++ +G Sbjct: 179 LDFAAAQLSLAGAAVQGLYGLTAATLQ-RQLSERD------VETGENNLRVIERRYERGI 231 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPN 258 ++ L + + + +++ ++ + TLLG YPA Q Q P Sbjct: 232 STSLDVRLARSSLAQSRANLAQRRQTEIAAARRLETLLGRYPAG------QMQGLGTLPG 285 Query: 259 LYIPIN-------IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS--- 308 L ++ +G P L+ RPDI E + S ++ A+ PSLSL+ S Sbjct: 286 LPTILDEDGAITGVGEPGWLLVRRPDILAAEADIEASGLRVAAARKAFLPSLSLSASAQS 345 Query: 309 -IALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 +A ++D+ S+ + + L P+F G++++N + E + + +TVL+A Sbjct: 346 LVADSYDDVSYDPDDLIANLVGNLVQPLFQGGRLRANEKAREFQLKSSLAQYGQTVLSAY 405 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +EVENALT+ + T A+E K + +L++ Y G ++ D+++ ++ E Sbjct: 406 EEVENALTAEHLLSTQYTAQALALEEAKAAEALTVRQYLAGTATIFDLINAQQRAISSES 465 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYNP 452 A + +DLY+A+G+ ++P Sbjct: 466 QFITAAEARLSNRIDLYLALGAPFHP 491 >gi|260752580|ref|YP_003225473.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551943|gb|ACV74889.1| RND efflux system, outer membrane lipoprotein, NodT family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 508 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/310 (23%), Positives = 144/310 (46%), Gaps = 22/310 (7%) Query: 152 AKLNVISKLIPSYID-ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 A L + + + +Y + +R F+ER + ++ L + +EL+ + G + ++ A Sbjct: 207 AALTLTTSIAAAYANLSRLFEER-QVLNRTLAVRSHVLELTQQRLGHGLDNDSTMQDASA 265 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + + ++D+ ++S + H I+ L+G + + QS + + +P N + + Sbjct: 266 RLANAQADLTANQESIDLVRHQIAALMGAGPDRGMAITRPQSVKLRA-VGLPDNAAL--N 322 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSF 326 L+ RPDI + ++ +AK+ YP++SLNG + + TH + Sbjct: 323 LLGRRPDIVAARLTAEAAGYRVKVAKTQFYPNVSLNGIVGY-QTRALEHMATHGLALGAA 381 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L LPIF G + R A ++ QE ++ +T+ A+++V +A TS K++ +L Sbjct: 382 SAALNLPIFRGGSLSGQYREAWATYQEAVASYDKTLSQALQQVADAATS---QKQLNLQL 438 Query: 387 QHAVE-LHKKSMSLSMI--NYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYV 440 V+ L+ +S +++ Y+ G + +++L E K DL QL V Sbjct: 439 DQTVQALNHAELSYNVLANRYKSGLVTYIEVLQGEENVLTLRKAVADLRARAFQLD---V 495 Query: 441 DLYIAIGSGY 450 L A+G G+ Sbjct: 496 SLIQALGGGF 505 >gi|283956020|ref|ZP_06373509.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792496|gb|EFC31276.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 1336] Length = 456 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/387 (21%), Positives = 180/387 (46%), Gaps = 42/387 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C G + + P L TQ + + +N+ T W++S+++ Sbjct: 1 MKIILSIFLTFF--LSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYKSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGVDKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYSYKYELGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLAKQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKE 368 NI+ ++ + ++ I++++ + +A+ E Sbjct: 338 QNIKISQFTYEQLLISYEQALQSAMNE 364 >gi|88597076|ref|ZP_01100312.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 84-25] gi|88190765|gb|EAQ94738.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 84-25] gi|284925869|gb|ADC28221.1| putative outer membrane efflux protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927344|gb|EFV06688.1| outer membrane efflux family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928608|gb|EFV07900.1| Outer membrane efflux protein [Campylobacter jejuni subsp. jejuni 305] Length = 456 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/407 (20%), Positives = 180/407 (44%), Gaps = 42/407 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C V K + L Q N T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ + ++ I++++ + +A+ E D ++ LQ+ Sbjct: 338 QNIKISQFAYEQLLISYEQVLQSAMNEFALNYKDYQSDTLLLQNLQN 384 >gi|218261803|ref|ZP_03476518.1| hypothetical protein PRABACTJOHN_02189 [Parabacteroides johnsonii DSM 18315] gi|218223749|gb|EEC96399.1| hypothetical protein PRABACTJOHN_02189 [Parabacteroides johnsonii DSM 18315] Length = 400 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 38/287 (13%) Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 D+ N++ +Y A K + Q +D+ ++ + +F G SK L++++ Sbjct: 100 DLTTDNIVYAADLNYWSAAARKGMYDVMCQYVDIVQELANVLTTRFNDGQISKTDLLQVQ 159 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + +K E + K +++ + N++ L+G P + + QP +P++IG A Sbjct: 160 SRLKEAELNKSAAYKDYQIALQNLNVLMGVPPMTPVE-IADAITMVQP---LPMHIGEEA 215 Query: 270 DLIRNRPD-------IRYQEKKLADSVAK------IGIAKSDLYPSLSLNGSIALTHDNS 316 L +NRPD I YQ++++ S AK IG + P L++ GS L Sbjct: 216 AL-QNRPDFTISKLNIEYQKRQINLSKAKYNPTLAIGFQGTWGTPMLNVKGSDQLWTPAV 274 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVEN 371 F L +P+F G R E ++Q+ + +E ++ + EV N Sbjct: 275 FAS----------LKIPLFRWGA-----RFKEVNSQKAILRSKEYAMDYTRDQISQEVAN 319 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + TS+ E+ K + + A ++ ++++ L+ +Y +G+ +LD+L + Sbjct: 320 SWTSLTENTKQINVAEEACKIAEENLDLNTFSYNEGKLPILDVLSAQ 366 >gi|205355458|ref|ZP_03222229.1| putative outer membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346692|gb|EDZ33324.1| putative outer membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 456 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/407 (20%), Positives = 180/407 (44%), Gaps = 42/407 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C V K + L Q N T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIGYDLYPTLSGNLGFGADKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ + ++ I++++ + +A+ E D ++ LQ+ Sbjct: 338 QNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQN 384 >gi|218562259|ref|YP_002344038.1| putative outer membrane efflux protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112359965|emb|CAL34754.1| putative outer membrane efflux protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 456 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/407 (20%), Positives = 180/407 (44%), Gaps = 42/407 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C V K + L Q N T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ + ++ I++++ + +A+ E D ++ LQ+ Sbjct: 338 QNIKISQFAYEQLLISYEQVLQSAMNEFALNYKDYQSDTLLLQNLQN 384 >gi|86149884|ref|ZP_01068113.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839702|gb|EAQ56962.1| outer membrane efflux protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 456 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/407 (20%), Positives = 180/407 (44%), Gaps = 42/407 (10%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C V K + L Q N T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSACGVKLSLPK-EVDLTQEQMKDLNL-------TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL + K+ G +L L+ +E + + ++ + +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNR 222 Query: 227 RMNVHNISTLLG-YPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQEKK 284 + + N+ LL ++ Y + S N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLARQEGFAYIEYFKTLSLNDFKT---LSPDFNIPLKALAYRADVRSKLNS 279 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 L + + + PS+SL G+++ + D+SF S K+ LP D G++K Sbjct: 280 LKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGRVK 337 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 NI+ ++ + ++ I++++ + +A+ E D ++ LQ+ Sbjct: 338 QNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQN 384 >gi|289166502|ref|YP_003456640.1| outer membrane efflux protein [Legionella longbeachae NSW150] gi|288859675|emb|CBJ13645.1| outer membrane efflux protein [Legionella longbeachae NSW150] Length = 437 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 99/444 (22%), Positives = 184/444 (41%), Gaps = 41/444 (9%) Query: 25 TKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINA 84 ++P +P ++ L + WWE F D LN+ V+ AL+ N + A I Sbjct: 7 SQPSSIYIPAYLKASSNDALNQLPYQAWWEDFRDPLLNQFVEKALRYNNNVTIAKRSIRV 66 Query: 85 AKENILSVRADLFPSSYASISHRFIPNLKTNST--GQLDSDWK--IDLFGQRRHIESSLA 140 ++ + ++R + P + P L G L S ++ + L+ Q++ E L Sbjct: 67 SQAELQTIRLNWLPGLNVLMGFSQDPALGNPGVFYGVLPSYYQNFVALYFQQKKAEFVLK 126 Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 + Y V +L VI ++ SY + ++ + +QI KK + + QG Sbjct: 127 RAKAYYLGV---RLTVIGEVTSSYFSLLAWNHQLELLNQIEQDNKKLLVSLKIAKNQGLA 183 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF--QPN 258 + L L+ + ++++S+ + + + + + L+ P + K +F P+ Sbjct: 184 NNLQLLTVTSQLQSVLGLRQQAQNNIIASENALHYLINEPPGKI-----KSGPSFIKVPS 238 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---------SLNGSI 309 +P+N I +I RPD+ L + + + IA+S L P+L SLNG+ Sbjct: 239 KEVPLN-KINTQVILRRPDVMVALTSLFAACSGVNIAESQLLPALTLDYFWGKASLNGTF 297 Query: 310 -ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + TH + ++ P L+ I I N AE + + NA++ Sbjct: 298 NSPTHSAPYGDIYATFNLSPSLFGQILTSKAI-FNKSLAE---------YNNVIQNALRL 347 Query: 369 VENALTSINEDKKIVTKLQH---AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 + N SI ++K++ K A+E KK L Y +G S D+L + Sbjct: 348 IAN---SIAANQKLMAKYHEDALALEALKKRYHLQQDLYAKGLISHNDLLYSRIEINQQA 404 Query: 426 VDLSIAKRQLAKSYVDLYIAIGSG 449 L+I+K + S + LY + +G Sbjct: 405 YQLTISKLEQLISVIRLYEELAAG 428 >gi|257485255|ref|ZP_05639296.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 198 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTH 323 +P+ + R DIR +E+ + S A IG A++ +PS+ L+ S+ L D+ F + Sbjct: 5 LPSQRLLERFDIRQREEAVKASNANIGAARAAFFPSIKLSTSVGLQSDSLRTLFSNGSGT 64 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 W F P+L LP+FD G+ ++N+ A Q +++ + NA +E+ LT Sbjct: 65 WLFSPQLNLPLFDGGRNQANLDLAHVRQQIAVAEYEKAIQNAFREMAGVLT 115 >gi|172064040|ref|YP_001811691.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gi|171996557|gb|ACB67475.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 606 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 85/400 (21%), Positives = 172/400 (43%), Gaps = 63/400 (15%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L++LV A + N L + QA RI A+ L ++ A++S + Sbjct: 71 WVKQLQDPQLDELVAEASRNNPDLQVAQARLRIAQAQLRQFDSLTGLTGTAGATVSRARM 130 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ S G ++ D +++DL+G+ R SL +L D+A Sbjct: 131 PKPGDVADVSVGGYRVPVEIFGDPVVSPSSVFVGLTYQLDLWGRNRAATKSLMSLRDAAG 190 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 + + +L + ++ Y ++ A+ + DL ++ +++S +++ V Sbjct: 191 VEAEQVRLTLAVAIVSVYC-------QLDQAYAVRDLLQQKLKISQ---------RVTAV 234 Query: 207 KLEAEIKSIESDIPTLEKSFR-------MNVHN---------ISTLLGYPATEFLHYMQK 250 E + +++ + S + M +++ + L G L + Sbjct: 235 LRERTARGLDNAYDASDASIKRTRLLEQMALNDEQIKLAQLQLGVLSGRGPERGLSLQRP 294 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNG 307 + F P +P + PADL+ RPDI ++ + A ++ YP + +L G Sbjct: 295 RVGAF-PGGALPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGG 351 Query: 308 SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 ALT + F S GP + LP+FD+G++K+ + + A + +TV +A+ Sbjct: 352 VFALTPASLFSRDALAGSVGPAISLPVFDRGRLKAKLGADVAQADVAIGLYNKTVDDALG 411 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +V +TS+ + +V + Q AV +K + ++ +R+G Sbjct: 412 QVAQIVTSLQTAQTLVAQQQDAVAAAQKIVQIAADRHRRG 451 >gi|167717387|ref|ZP_02400623.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei DM98] Length = 296 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 23/249 (9%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW ++D LN L+ Sbjct: 27 GCAVGPDYHRPDAAIPAAYKEAPPGWKLAQPAD--RADRGPWWSIYDDAQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---------SYASISHRFIPNLKTNSTGQ-- 119 N T+ Q A+ + RA FP+ + +++S T + G Sbjct: 85 SNQTVAQYAAAYRQARALVAEARASYFPTLGLTASESRASSALSSGTASRGTTRTVGNTY 144 Query: 120 ---LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 LD+ W+ DL+G+ R + + A +A A + A+L+ + L +Y R Sbjct: 145 SVGLDASWEPDLWGKVSRTVGAQKAGEAAAAADLANARLSAQATLAQTYFQLRAADATQK 204 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + ++ Y+K+++L+ ++ QG ++ +++ + +++S ++ + H I+T Sbjct: 205 LLDDTVESYRKSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAAIDNGIARAQYEHAIAT 264 Query: 236 LLGYPATEF 244 L+G PA F Sbjct: 265 LVGEPAPTF 273 >gi|330945812|gb|EGH47208.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 268 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTH 323 +P+ + R D+R +E+ L S A IG A++ +PS+ L+ + L D+ F + Sbjct: 75 LPSQRLLERFDVRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGA 134 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 W F P+L LP+FD G+ ++N+ A+ Q +++ V NA +E+ LT Sbjct: 135 WLFTPQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLT 185 >gi|254249989|ref|ZP_04943309.1| Outer membrane protein [Burkholderia cenocepacia PC184] gi|124876490|gb|EAY66480.1| Outer membrane protein [Burkholderia cenocepacia PC184] Length = 810 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 85/391 (21%), Positives = 166/391 (42%), Gaps = 45/391 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L+ LV A Q N L + QA RI A+ L ++ A+IS + Sbjct: 335 WVKQLQDPQLDDLVAEASQHNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATISRARM 394 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ + G Q+ D +++DL+G+ R SL +L D+A Sbjct: 395 PKPGDIADVTAGGYRVPVQIFGDPNVSPSSVFVGLNYQLDLWGKNRAATKSLMSLRDAAG 454 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL-------KFTQGA 199 + + +L + ++ Y ++ A+ + DL ++ +++S + +G Sbjct: 455 VEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQKLKISQRVTAVLRERTARGL 507 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 + + + I ++ ++ + L G L + + F Sbjct: 508 DNAYDASDASIKRSRLLEQIALNDEQIKLAQLQLGVLSGRGPERGLALQRPRVGAFAGG- 566 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNS 316 +P + PADL+ RPDI ++ + A ++ YP + +L G ALT + Sbjct: 567 AVPSRL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPASL 624 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + S GP + LPIFD+G++K+ + + A + +TV +A+ +V +TS+ Sbjct: 625 FSRDSLAGSVGPAISLPIFDRGRLKAKLGADVAQADVAIGLYNKTVDDALGQVAQLVTSL 684 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + +V + Q AV +K + ++ +R+G Sbjct: 685 QTSQTLVAQQQDAVAAAQKIVQIAADRHRRG 715 >gi|167851749|ref|ZP_02477257.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei B7210] Length = 486 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 47/392 (11%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGEL----DRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ ++ + L G L + + P Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIQLQKLQLGVLSGRGPERGLSLARPK---LAPL 300 Query: 259 LYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDN 315 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + Sbjct: 301 ADAPLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPAS 360 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS Sbjct: 361 LFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTS 420 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + ++ Q A+ ++ ++L+ +R+G Sbjct: 421 LATLDTLLKAQQQALRAAQRMVALAQDRHRRG 452 >gi|67640435|ref|ZP_00439241.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|238521149|gb|EEP84603.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] Length = 531 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 98/442 (22%), Positives = 183/442 (41%), Gaps = 55/442 (12%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA--DLFPSSYASISHRFI 109 W D L+ LV AL+QN T+ A RI A+ + + L ++ AS+S + Sbjct: 72 WVRQLGDPQLDALVDEALRQNPTLQAAQARIGVAQSQLQQFESLTGLTATAGASLSKAHV 131 Query: 110 PNLKTNSTGQLDS--------------------------DWKIDLFGQRRHIESSLANL- 142 P S G L++ ++++DL+G+ L ++ Sbjct: 132 PR----SGGTLNTTLNGLPVSVPLVGESVVSSSSLFVGLNYQLDLWGKNAAATRGLLSMR 187 Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D+A + + A+L + ++ Y + +R ++L ++ E + A Sbjct: 188 DAARVEAEQARLTLSVAIVTLYGE----LDRAYALRELLQQKRRASEQVEAVLRERAARG 243 Query: 203 L--SLVKLEAEIK--SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN 258 + +A +K + I ++ R+ + L G L + + + Sbjct: 244 IDNGYDADDAALKRGKLLEQIALTDEQIRLQRLQLGVLSGRGPERGLSLARPKLAPLA-D 302 Query: 259 LYIPINIG--IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTH 313 +P + +PA L+ RPDI ++ + A I ++ YP + +L G ALT Sbjct: 303 APLPARLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTP 362 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F S GP L LPIFD+ ++K+ + ++A + +TV A+ EV L Sbjct: 363 ASLFRHDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQL 422 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLS 429 TS+ ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L Sbjct: 423 TSLATLDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQ 481 Query: 430 IAKRQLAKSYVDLYIAIGSGYN 451 +R L V L A+G G++ Sbjct: 482 ARRRTL---RVGLIGALGGGFD 500 >gi|313681756|ref|YP_004059494.1| rnd efflux system, outer membrane lipoprotein, nodt family [Sulfuricurvum kujiense DSM 16994] gi|313154616|gb|ADR33294.1| RND efflux system, outer membrane lipoprotein, NodT family [Sulfuricurvum kujiense DSM 16994] Length = 491 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 79/364 (21%), Positives = 161/364 (44%), Gaps = 29/364 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASI----- 104 WW+ + D LN +++ AL + +I + A I SV + P S+ AS+ Sbjct: 69 WWKMYGDEQLNGIIEEALAKAPSIQSLEAKFAQANTIIQSVESRNLPHLSANASVIRERF 128 Query: 105 --SHRFIPNLKTNSTGQ----LDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVI 157 +H F P L + Q L ++ D + +R HI ++ + A ++ +K+ + Sbjct: 129 SENHIFPPPLGGGTYTQYQPELMLEYDFDFWNERSSHISAAKNTALAQRATIEASKIALS 188 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S L +YI + ++++SI + + ++ +++ ++ G ++L ++ I Sbjct: 189 SALCETYIAWHYEEQKLSILNALDRTTREELKIVEKQYALGLIDAIALNDKKSAQMQIAQ 248 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + L++S I L G+ + + ++ + NL +P + + +L+ +R D Sbjct: 249 RMEELKRSIEGKKEAICVLGGFLPS-YAETLRTPTIKHGFNLPLPKEVML--NLVAHRSD 305 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK----LYLP 333 + + I K+ YP++SL+G I T N + H S+ P + LP Sbjct: 306 VAIAKYTALSKSYTIEQTKAQFYPNISLSGLIGFTSFN-WSKLMDHSSYSPSAGIAVSLP 364 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + D G K+N++ + S + + V+ A EV + + + K I ++LQ LH Sbjct: 365 LLDWGMRKANLQNSVSDYNASVYEYNQAVIKAANEV---VVLLKQTKLIQSQLQ----LH 417 Query: 394 KKSM 397 + M Sbjct: 418 DREM 421 >gi|325518198|gb|EGC97965.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 210 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 30/187 (16%) Query: 18 CTVGPEYTKPHM-----------PLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVK 66 C VGP++ +P P + Q+ D +W F D +L +L+ Sbjct: 19 CAVGPDFKRPDTVTAARFARDAHPSM--QYDAAPPDASAEADA-AFWRGFGDPALTRLID 75 Query: 67 IALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISH------------RFIPNL 112 AL N + A R +A+ + D +P+ AS I H R + + Sbjct: 76 AALAANQDLQAAVSRYDASNALLSQAAFDRYPTITASGQIGHQLSSRDQAFGAPRSVRDT 135 Query: 113 KTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +S G +++ W++DLFG+ RR IES A ++ A V ++ + +++ +Y+D R + Sbjct: 136 PVSSVG-INAAWELDLFGRVRRSIESQRAETAASAADVRAVRVAIAAEVARTYVDLRGSQ 194 Query: 172 ERISIAH 178 ER+ IA Sbjct: 195 ERLRIAR 201 >gi|218259443|ref|ZP_03475175.1| hypothetical protein PRABACTJOHN_00833 [Parabacteroides johnsonii DSM 18315] gi|218225097|gb|EEC97747.1| hypothetical protein PRABACTJOHN_00833 [Parabacteroides johnsonii DSM 18315] Length = 451 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 54/330 (16%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNL----- 112 +L + AL+ N+TI + +A+E++ + +AD PS +IS R + PN Sbjct: 30 TLRDCIDYALEHNITIQRNRISAESAQEDVKTAKADFLPSLSGNISQRIVNRPNSASGTI 89 Query: 113 -----------KTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYAQ--VDIAKLNVI 157 KT+ G +D++W + G +R L++ A+ VD ++ ++ Sbjct: 90 ISGDNITTSESKTSYNGSYGIDANWTV-YNGSKRVNTVKQQKLNNRIAELNVDESENSIE 148 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + Y+ + E + + L++ +K E + F G+ + L +LEA++ S Sbjct: 149 ENITQLYVQILYSAEAVEVNRSTLEVSRKQYERGQVLFNVGSIASSDLAQLEAQVSSDNY 208 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIP---AD 270 + T E +TL Y L + + + + +LY+P N+ P D Sbjct: 209 QLVTSE----------ATLQDYKLQ--LKQLLELDGDIEMDLYLPQLDDSNVLTPLPSKD 256 Query: 271 LIRN-----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFP-GY 320 + N RP+I + + S I +A++ P+LSL+ I T+ N SF Sbjct: 257 DVYNTALSLRPEIEAGKLNVETSDLSIKMARAGYLPTLSLSAGIGSTNANGSDFSFSEQV 316 Query: 321 NTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G L +PIFDK + KS+I +A+ Sbjct: 317 KRNWNNSLGLTLSIPIFDKRQTKSSINKAK 346 >gi|261868026|ref|YP_003255948.1| TolC protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413358|gb|ACX82729.1| TolC protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 286 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 22/255 (8%) Query: 8 FSLFIVLLAGCTVGPEYTKPHMPLLPTQF----SIGNSKNLINIDTLKWWESFNDTSLNK 63 F + L+ CT + + +P QF + SKN+ I +WW+++ D L + Sbjct: 11 FIAAFITLSACTTNVDLSS--QVEMPAQFEQTQNAATSKNIQEI--ARWWQNWRDPQLTR 66 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ---- 119 L+++ LQ NL I A R+ A+ N +ADL P A S I + N Q Sbjct: 67 LIELGLQNNLDIEIAKARLQEAQANSQYTQADLGPKVGAQGSAGMIHSHGENPLTQRTYD 126 Query: 120 ---------LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + W++D FG++R +++ A + +A QV A++ V ++ SY + Sbjct: 127 RSGNVQHAGITASWELDFFGKKRSDRDAAQAAVLAAQQQVYAAQMLVAGQIAESYANIAA 186 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ ++ Q ++ + +F G + ++++E+ I ++++ TL N Sbjct: 187 LHQQNALLQQNETYLRRLKGYAEGRFRAGQANANDVLQVESRISAVQAQQATLNAQIAGN 246 Query: 230 VHNISTLLGYPATEF 244 I+ L+G P +F Sbjct: 247 ERAIAILIGKPPQDF 261 >gi|167590290|ref|ZP_02382678.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 194 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 5/124 (4%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSF 326 ++R+RPDIR + L + A++G+A + L+P LSL+ S+ N +P G WS Sbjct: 1 MLRSRPDIRAADAALQAAAAEVGVATAQLFPQLSLSASMGQGGFN-WPTILSGAGAIWSI 59 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G L PIF G + + R A+ S +++TVL A ++V ++L ++ D + + Sbjct: 60 GASLSQPIFHGGALLAQRRAAKESYAAAVDQYKQTVLTAFQDVADSLAALEHDAQALDAS 119 Query: 387 QHAV 390 + A Sbjct: 120 ERAA 123 >gi|146300984|ref|YP_001195575.1| RND efflux system outer membrane lipoprotein [Flavobacterium johnsoniae UW101] gi|146155402|gb|ABQ06256.1| RND efflux system, outer membrane lipoprotein, NodT family [Flavobacterium johnsoniae UW101] Length = 484 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 99/481 (20%), Positives = 195/481 (40%), Gaps = 51/481 (10%) Query: 12 IVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK---NLINIDTLKWWESFNDTSLNKLVKIA 68 ++LL C+ LP F + K +L + LK F D L L+K A Sbjct: 14 VLLLTACSAPKINNNFAAKQLPENFDLKRKKAEDSLQDFIPLKTETYFKDAKLENLLKKA 73 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS----------SYASISHRFIPNLKTNSTG 118 + QN L ERI A ++ + + L PS Y + + N TN + Sbjct: 74 IAQNPDYLIMQERILIANSHLKAAKLGLLPSLDFVADASGTHYGKYTMDGVGNFDTNFSQ 133 Query: 119 QLDS------------------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 ++ W+ D++G+ +++ ++ + + + ++S Sbjct: 134 NINEKQRINEDVTPNLFLGGKVSWEADIWGKLSNRKKAARERFFASQEGMRLLQTRLLSD 193 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y ++ SI + L +K +++ + + G ++L++ + A+ +I ++ Sbjct: 194 VADLYYKLIALDKQASIYDKNLKTQQKALDIISAQRSVGKATELAVQQFNAQNNNILAEA 253 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD-LIRNRPDI 278 L S + LLG E+ + + S+ +L + +N I D +I RPD+ Sbjct: 254 EQLNLSIDQTEKALLNLLG----EYGGKIDRSSDFLSGHLEV-LNQKISVDSIIHKRPDV 308 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--------HDNSFPGYNTHWSFGPKL 330 +L S A A++ +P+L+L G + SF W L Sbjct: 309 SEAYHELRASNADAKAARAAFFPTLNLGGYAGFNSFSFSTFFDNGSFA-----WQLLGGL 363 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+F+KG+IK + Q ++ +Q T+ A E+ L ++ + Sbjct: 364 TAPVFNKGQIKQEFFVSNKRQQISFLQYQNTITTAYNELSALLHRTESFVDVLKYKSKEI 423 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + ++++S Y G + L+I++ ++ + E+D + + A+S V LY A+G G Sbjct: 424 EHLEIAVNVSNDLYLSGYANYLEIINAQKNKLQAELDFVDIQLKNAESQVLLYKALGGGI 483 Query: 451 N 451 N Sbjct: 484 N 484 >gi|46202383|ref|ZP_00053303.2| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 327 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 294 IAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +A++ L+P+LS++G A DN + ++ L IFD GK +S+I +ES Sbjct: 1 MARAKLFPTLSISGDRGWAAQYFDNITNPTSIFFTLAATLAATIFDNGKTRSDIDYSESR 60 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E T+Q+T+L ++++VE++L ++ + Q ++ + LS +R G Sbjct: 61 QAELVETYQQTILTSLRDVEDSLLAVRLQGDLEVAQQEVLQASLDAYGLSSEAFRLGMVD 120 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 L++L+ +R + E A+ ++ + LY A+G G Sbjct: 121 YLNVLETQRTRFQAEDAKVQARFGRLEAAIGLYKALGGG 159 >gi|330890800|gb|EGH23461.1| outer membrane efflux protein [Pseudomonas syringae pv. mori str. 301020] Length = 154 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%) Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 S P N WS GP+L L +FD G+ + + R E+ + +++TVLN +EVEN L Sbjct: 12 SLP--NRFWSVGPQLALTLFDGGRRAAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQ 69 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQ 434 + ++ Q A+ + S+ L+ Y+ G LD+++++ E L++ + + Sbjct: 70 LKVYEQEAAVRQEALVSARDSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSR 129 Query: 435 LAKSYVDLYIAIGSGYNP 452 L S V L A+G G+N Sbjct: 130 LIAS-VQLIAALGGGWNA 146 >gi|329964405|ref|ZP_08301486.1| type I secretion outer membrane protein, TolC family [Bacteroides fluxus YIT 12057] gi|328525454|gb|EGF52502.1| type I secretion outer membrane protein, TolC family [Bacteroides fluxus YIT 12057] Length = 442 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/317 (22%), Positives = 143/317 (45%), Gaps = 30/317 (9%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNS-- 116 L + ALQQN+T+ + +A ++ + +A LFPS AS+S R + PN +TN+ Sbjct: 23 LQACIDYALQQNITLRKNRLSAESAGVDVKTAKAALFPSLSASVSQRVVNRPNSETNTII 82 Query: 117 ----------------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NVISK 159 + +D++W + G+R + L++ A+++I++ N I + Sbjct: 83 DGDNITSSQSKTSYNGSYGIDANWTLYNGGKRLNTLKQ-QRLNNRIAELNISQSENSIEE 141 Query: 160 LIP-SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 I +Y+ + E + + L++ + E + F G+ +K L +LEA++ + + Sbjct: 142 SIAQTYVQILYAAETVKVNESTLEVSQAECERARALFDAGSIAKSDLAQLEAQVSTDKYQ 201 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + T + + + + LL E ++ +N +P + + + RP+I Sbjct: 202 LVTAQATLQDYKLQLKQLLELDGEEEMNLYLPSLDNENVLAPLPAKLDVYRAALSLRPEI 261 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHW--SFGPKLY 331 + + + I IA++ P+LSL I H N ++W S G + Sbjct: 262 EAGKLDVQAADLDIKIARAGYMPTLSLTAGIGTNHANGNDFTFGEQVKSNWNNSLGFSIS 321 Query: 332 LPIFDKGKIKSNIRRAE 348 +PIF+ + KS +++A+ Sbjct: 322 VPIFNNRQTKSAVQKAK 338 >gi|283785943|ref|YP_003365808.1| multidrug resistance outer membrane protein [Citrobacter rodentium ICC168] gi|282949397|emb|CBG89009.1| multidrug resistance outer membrane protein [Citrobacter rodentium ICC168] Length = 479 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 96/486 (19%), Positives = 198/486 (40%), Gaps = 49/486 (10%) Query: 1 MNILRAIFSLFIVLLAGCT----VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESF 56 ++ ++A L I LLAGC V P T+ +P S+ + D+ +WW ++ Sbjct: 6 LHAMKACLPLAI-LLAGCAPMHDVKPALTQ-QLPASHVDTSLPAALQQGWPDS-QWWLAW 62 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENI---------------------LSVRAD 95 +D LN L+ AL+ + + A +RI A+ +S Sbjct: 63 HDPQLNDLIARALKNSPDMQVAEQRIQLAEAQAKATEAQDGPQLDFSGDIERQKMSAEGL 122 Query: 96 LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 + P + + TN T L W +DL+G+ R + + + + + A+ + + Sbjct: 123 MGPFAITDPAAGTTGPWYTNGTFGLTGGWDLDLWGKNRAEVTARIGAVKAREAEREQTRQ 182 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + S + Y + + ++ QI + I + G TS + V+ + ++ Sbjct: 183 LLASSVTRLYWEWQTEAALGNVLRQIAQEQRNIINTDRQLYENGITSSVEGVETDIDVSK 242 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + + ++ +S L A+ LH Q N + +P +G DL+ Sbjct: 243 TQQQLNDVAGKMKVIEARLSALTNAQASSVALH----QVNLPEVEGRLPAKLGY--DLLA 296 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKL 330 R D++ + S++ + AK+ YP +++ + AL + F L Sbjct: 297 RRADLQAAHWYIESSLSSVEAAKAAFYPDINVMAFLQQDALHLSDLFRSSAQQTGVTAGL 356 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD G++ +++ A + + ++ + V++A+ EV A + + + K QH Sbjct: 357 TLPIFDSGRLNASLDIARTRSNLSVASYNKAVVDAVNEVARAASQVG---TLAQKNQHQQ 413 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIA 445 ++ + + +N + R+ + + AK+ + + I + Q + V L A Sbjct: 414 QIEHDARRV--VNLAEARFKAGIVAGSRVSQAKIPALREQGNGLILQGQWLDASVQLTSA 471 Query: 446 IGSGYN 451 +G GY+ Sbjct: 472 LGGGYH 477 >gi|224023805|ref|ZP_03642171.1| hypothetical protein BACCOPRO_00521 [Bacteroides coprophilus DSM 18228] gi|224017027|gb|EEF75039.1| hypothetical protein BACCOPRO_00521 [Bacteroides coprophilus DSM 18228] Length = 447 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 40/342 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------- 109 +LN + AL++N+ + Q + ++ +I S RA LFPS S H + Sbjct: 27 TLNDCINYALEKNIQLQQNKLSLEESEIDIKSARAALFPSLSFSTGHNIVNRPYQENSAT 86 Query: 110 --------PNLKTNSTGQ--LDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVIS 158 + KT G L++ W + G+R +I+ N D A V+ + + Sbjct: 87 VSGSEIISSDSKTTYNGSYSLNAQWTLWNGGKRLNNIKQQKTNRDIANLTVEETENMLQE 146 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +I + E + I L++ + E F +G+ SK L +LE+++ + + Sbjct: 147 EIAKIFIQILYADESVEINKGTLEVSQATYERGKELFKEGSISKADLAQLESQVSNDQYQ 206 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + T E S R + LL TE + + + N+ +P I + RP+I Sbjct: 207 LVTAESSLRNYKLQLKQLLELDGTEEMDLVLPELNDEHVMELLPSQQDIYQTALNTRPEI 266 Query: 279 RYQEKKLADSVAKIGI--AKSDLYPSLSLNGSIALTHDNSFP---------GYNTHWSFG 327 Q KL+ AK+ I AK+ YPS+SL+ S + +N+ G+N + G Sbjct: 267 --QSGKLSIDNAKLAISTAKAGYYPSISLSASTSSMTNNASQNNWAQQMKYGWNN--TIG 322 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 L +PIFD + K+N+++A+ QY T Q ++N KE+ Sbjct: 323 VSLSIPIFDNRQNKTNVQKAKI----QYSTTQLDLVNKQKEL 360 >gi|78356008|ref|YP_387457.1| hypothetical protein Dde_0961 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218413|gb|ABB37762.1| Outer membrane protein-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 491 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 83/412 (20%), Positives = 169/412 (41%), Gaps = 35/412 (8%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKT 114 SL+ +KIALQQN I E + A I R+ + P +SY + + Sbjct: 75 SLSDCLKIALQQNYDIRLTREALTQANTKITQARSAMLPFLGAEASYTRLDEELSFAMGP 134 Query: 115 NSTGQLDSD-WKIDLF-------GQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSY 164 S +D D +K L G R + ++S + D+ + + V+ ++ +Y Sbjct: 135 QSLTFMDRDQYKAGLVIRQPIFTGGRLNAARKASQYSRDAQAQENRAVEEEVVFQVTRAY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 A+ + +A + +DL + + +GA ++ L++ E+ + D+ + Sbjct: 195 RTAQLAEAFQGVAVEAVDLLNVHEHDVAILVEKGANPEIDLLRTRTELANARKDLNGADN 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPD 277 + + + LL P E + + + P ADL + RP+ Sbjct: 255 AVDLAYSALKNLLSMPLEESVRLTEALVRSPGPG----------ADLSSLTELALSQRPE 304 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIF 335 + + K+A + + A+ + P+++L G + G HW+ G P++ Sbjct: 305 LSAMDSKMAAAEQALKAARGEYLPTIALEGRYEYMEGDFRDLEG-GEHWTVGIGAQFPLW 363 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + GK + +R A S + I +T EV A + + +K + + A++ ++ Sbjct: 364 NWGKTAAKVREAGSQRAQVKIQRDKTTDRIRLEVRQAFLDLGKAEKNIDAAESALKTARE 423 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + L+ +YR G + D+LD+ A ++ E + + A + L+ A+G Sbjct: 424 AYRLARASYRAGEGTNTDVLDVRTALSRAEANHTQALFDYNVALAALHRAVG 475 >gi|227825200|ref|ZP_03990032.1| outer membrane efflux protein [Acidaminococcus sp. D21] gi|226905699|gb|EEH91617.1| outer membrane efflux protein [Acidaminococcus sp. D21] Length = 332 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 14/267 (5%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y D +++ + +D +++ + +F G ++K+ +++ + E+ + + Sbjct: 45 GYYDVLESINTVNLQKETVDRLAEHLRNTQSQFNVGVSAKVDVLRSQVELVDAQQTLTQA 104 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + S+ + V ++ +LG P L + ++PN Y N A L NRP+I + Sbjct: 105 QNSYDVAVATLNNVLGLPTGTPLSL--SEGLEYKPNDYTLDNCLSYAML--NRPEIHQAQ 160 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIK 341 + + A+ IA + P +SL+ + D+ FPG + WS G + I+D G Sbjct: 161 ASVDMAKAEQKIANAATLPQVSLSAANGWA-DDRFPGAHKYEWSVGASVDFNIWDYGVNA 219 Query: 342 SNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + IR+A+++ A+E Y + V A++ + S+ E +K + + AVE ++ Sbjct: 220 AKIRQAKANVVKAEESYRQISDQVNLAVR---TSYLSMREAEKRIKTTEVAVEQAEEDYR 276 Query: 399 LSMINYRQGRYSLLDILDIERA--TAK 423 ++ + Y+ G + D+LD A TAK Sbjct: 277 IAQLRYQAGVGTNTDVLDASVALTTAK 303 >gi|78061411|ref|YP_371319.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gi|77969296|gb|ABB10675.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 629 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 91/439 (20%), Positives = 182/439 (41%), Gaps = 52/439 (11%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L+ LV A Q N L + QA RI A+ L ++ A++S + Sbjct: 69 WVKQLKDPQLDALVAEASQNNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATVSRARM 128 Query: 110 PNLKTNSTGQLDSDWKI-----------------------DLFGQRRHIESSLANLDSAY 146 P + S +++ DL+G+ R SL +L A Sbjct: 129 PKPGNDVADVSVSGYRVPVEIFGDPNTSPSSVFVGLTYQLDLWGKNRAATKSLMSLREA- 187 Query: 147 AQVD---------IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 A+V+ +A + V +L +Y ++++ ++ ++ + ++ Sbjct: 188 ARVEAEQVRLTLAVAIVTVYCQLDQAYATQELLQQKLKVSQRVTTVLRERTARGLDNAYD 247 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 + + + KL A+I + I ++ + L G L + + F Sbjct: 248 ASDASIKRSKLLAQIALNDEQI-------KLAQLQLGVLSGRGPERGLALQRPRVGAFAG 300 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHD 314 +P + PADL+ RPDI ++ + A ++ YP + +L G ALT Sbjct: 301 G-ALPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPA 357 Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + F S GP + LPIFD+G++K+ + + A + +TV +A+ +V +T Sbjct: 358 SLFSRDALAGSVGPAISLPIFDRGRLKAKLGADVAQADVAIGMYNKTVDDALGQVAQFVT 417 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAK 432 S+ + +V + Q AV +K + ++ +R+G +D+ D+ + ++ + + Sbjct: 418 SLQTSQTLVAQQQDAVAAAQKIVEIATDRHRRGVLMQKDVDVADLTLIDERAQMIALLGR 477 Query: 433 RQLAKSYVDLYIAIGSGYN 451 ++ + V L A+G G++ Sbjct: 478 QRTLR--VGLIGALGGGFD 494 >gi|217425572|ref|ZP_03457065.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] gi|217391535|gb|EEC31564.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 576] Length = 397 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFP 318 P+ +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 174 PLPARLPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFR 233 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ Sbjct: 234 HDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLAT 293 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQ 434 ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R Sbjct: 294 LDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRT 352 Query: 435 LAKSYVDLYIAIGSGYN 451 L V L A+G G++ Sbjct: 353 L---RVGLIGALGGGFD 366 >gi|189347428|ref|YP_001943957.1| outer membrane efflux protein [Chlorobium limicola DSM 245] gi|189341575|gb|ACD90978.1| outer membrane efflux protein [Chlorobium limicola DSM 245] Length = 431 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 63/286 (22%), Positives = 123/286 (43%), Gaps = 12/286 (4%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L ++ D +E ++++ +I + +KN L L++ G SL K EA++ E ++ Sbjct: 141 LRSAFTDLLKAEELVALSKEIAERRRKNFRLIGLRYQAGREHIGSLRKAEADLGESEFEV 200 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 E+ + +++ LG + K S + L + N+ + L R P ++ Sbjct: 201 SRAERGLVLAQSILASALGRDLRSPIRV--KGSFTVEDVLTVKPNLAL---LARESPLVQ 255 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E + + + AK P LSL SI +S P W+ G +L LPI+ G Sbjct: 256 QLEARRKAARYDLEAAKGAFSPELSLTSSIGRNSFDSLPPDEVDWNAGIELSLPIYGGGT 315 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + RA + +Q + L +E + + + ++ VT + ++ + ++ Sbjct: 316 GRAKVARAMAVVSQQNAEEKSGYLQVFDMLEESWKNFLDARQYVTVRRKFLDAAVERAAI 375 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + Y G S D + IE +L AK++ + DL IA Sbjct: 376 ANVQYSNGLISFDDWVIIED-------NLVSAKKEFLNAGADLLIA 414 >gi|167821804|ref|ZP_02453484.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 91] Length = 207 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFP 318 P+ +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 11 PLPARLPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFR 70 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ Sbjct: 71 HDALGGSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLAT 130 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQ 434 ++ Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R Sbjct: 131 LDTLLKAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRT 189 Query: 435 LAKSYVDLYIAIGSGYN 451 L V L A+G G++ Sbjct: 190 L---RVGLIGALGGGFD 203 >gi|319902513|ref|YP_004162241.1| outer membrane efflux protein [Bacteroides helcogenes P 36-108] gi|319417544|gb|ADV44655.1| outer membrane efflux protein [Bacteroides helcogenes P 36-108] Length = 467 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 84/389 (21%), Positives = 164/389 (42%), Gaps = 70/389 (17%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL--KWWESFNDT 59 N+ R ++ + +A C P T+ T ++ +++ D+L +W Sbjct: 3 NVRR--LTVITLCMASCAWLPAQTR-------TDVQQATAETILHTDSLPAQW------- 46 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNS- 116 +L + A++QN++I + +A+ ++ + +A LFPS AS+S R + P +TN+ Sbjct: 47 NLQACIDYAIKQNISIRKNRLSAQSAEVDVKTAKAALFPSLSASVSQRIVNRPQSETNTI 106 Query: 117 -----------------TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 + +D++W + G+R + I+ N A V ++ N+ Sbjct: 107 INGDNITSSQSKTSYNGSYGIDANWTLYNGGKRLNTIKQQELNNRIAQLSVSQSENNIEQ 166 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + +Y+ + E + I L + + E S +G+ ++ L +LEA++ S + Sbjct: 167 SIAQTYVQILYAAEAVKINESTLKVSQAECERSRQLLKEGSIARSDLAQLEAQVSSDKYQ 226 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP----AD 270 T + + + + LL E + NLYIP N+ P D Sbjct: 227 FVTAQATLQDYKLQLKQLLELDGEEEM------------NLYIPALGTENVLSPLPSKMD 274 Query: 271 LIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYN 321 + ++ RP+I + + S I IA++ P+LSL+ I +H N Sbjct: 275 VYQSALTLRPEIEEGKLNVQASELNIKIARAGYMPTLSLSAGIGTSHSNGSDYTFSEQIK 334 Query: 322 THW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF + KS + +A+ Sbjct: 335 QNWNNSLGFTVSVPIFSNRQTKSAVEKAK 363 >gi|171318462|ref|ZP_02907616.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171096328|gb|EDT41231.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 601 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 85/397 (21%), Positives = 167/397 (42%), Gaps = 57/397 (14%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L++LV A + N L + QA RI A+ L ++ A++S + Sbjct: 68 WVKQLQDPQLDELVAEASRNNPDLQVAQARLRIAQAQLQQFDSLTGLTGTAGATVSRARM 127 Query: 110 P-----------------------NLKTNSTGQLDSDWKIDLFGQRRHIESSLANL-DSA 145 P N+ +S + +++DL+G+ R SL +L D+A Sbjct: 128 PKPGDVADVSVAGYRVPVEIFGDPNVSPSSI-FVGLTYQLDLWGKNRAATKSLMSLRDAA 186 Query: 146 YAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 + + +L + ++ Y ++ A+ + DL ++ LK +Q T+ L Sbjct: 187 GVEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQ-----KLKISQRVTAVLRE 234 Query: 206 VKLEAEIKSIESDIPTLEKS------------FRMNVHNISTLLGYPATEFLHYMQKQSN 253 + ++ ++++S ++ + L G L + + Sbjct: 235 RTARGLDNAYDASDASIKRSRLLEQMALNDEQIKLAQLQLGVLSGRGPERGLSLQRPRVG 294 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIA 310 F P +P + PADL+ RPDI ++ + A ++ YP + +L G A Sbjct: 295 AF-PGGALPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFA 351 Query: 311 LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 LT + F S GP + LP+FD+G++K+ + + A + +TV +A+ +V Sbjct: 352 LTPASLFSRDALAGSVGPAISLPVFDRGRLKAKLGTDVAQADVAIGLYNKTVDDALGQVA 411 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +TS+ + +V + Q AV +K + ++ +R+G Sbjct: 412 QIVTSLQTAQTLVAQQQDAVAAAQKIVQIAADRHRRG 448 >gi|154490315|ref|ZP_02030576.1| hypothetical protein PARMER_00548 [Parabacteroides merdae ATCC 43184] gi|154088926|gb|EDN87970.1| hypothetical protein PARMER_00548 [Parabacteroides merdae ATCC 43184] Length = 451 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 152/342 (44%), Gaps = 60/342 (17%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 D K W +L + AL+ N+TI + +A+E++ + +AD PS +IS R Sbjct: 24 DAPKQW------TLRDCIDYALEHNITIQRNRISAESAQEDVKTAKADFLPSLSGNISQR 77 Query: 108 FI--PNL----------------KTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYA 147 + PN KT+ G +D++W + G +R L++ A Sbjct: 78 VVNRPNSARGTIISGDNITTSESKTSYNGSYGIDANWTV-YNGSKRVNTVKQQKLNNRIA 136 Query: 148 Q--VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSL 205 + VD ++ ++ + Y+ + E + + L++ +K E F G+ + L Sbjct: 137 ELNVDESENSIEESITQLYVQILYSAEAVKVNESTLEVSRKEFERGQELFNVGSIASSDL 196 Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP--- 262 +LEA++ S ++++ V + +TL Y L + + + + +LY+P Sbjct: 197 AQLEAQVSS---------DNYQL-VTSQATLQDYKLQ--LKQLLELDGDIEMDLYLPQLS 244 Query: 263 -INIGIP---ADLIRN-----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 N+ IP D + N RP+I + + S I +A++ P+L+L+ I T+ Sbjct: 245 DSNVLIPLPEKDDVYNTALSLRPEIEAGKLNVESSDLSIKMARAGYLPTLNLSAGIGSTN 304 Query: 314 DN----SFP-GYNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 N SF +W S G L +PIFDK + KS+I +A+ Sbjct: 305 ANGSDFSFSEQVKQNWNNSLGLTLSIPIFDKRQTKSSINKAK 346 >gi|297521504|ref|ZP_06939890.1| copper/silver efflux system outer membrane protein CusC [Escherichia coli OP50] Length = 141 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 6/136 (4%) Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + NA KEV +AL Sbjct: 9 FNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALR 68 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKR 433 ++ Q + + ++ + Y+ G S L++LD ER AT + +DL+ A R Sbjct: 69 QSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYA-R 127 Query: 434 QLAKSYVDLYIAIGSG 449 Q+ + + LY A+G G Sbjct: 128 QVNE--ISLYTALGGG 141 >gi|167738332|ref|ZP_02411106.1| Outer membrane protein [Burkholderia pseudomallei 14] Length = 166 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 5/127 (3%) Query: 258 NLYIP--INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALT 312 +L++P + + +P+ L++ RPDIR E L + A++G+A + ++P LSL+ S+ Sbjct: 18 DLHLPQDVPVVVPSTLLQARPDIRAAEAGLQAAAAEVGVATAQMFPQLSLSASMGHAGFK 77 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G WS G L P+F G + + R A +S +++TVL A ++V + Sbjct: 78 WPAMLSGAGAIWSVGASLTQPLFHGGALLAQRRAARASYDAAVDQYKQTVLAAFQDVADK 137 Query: 373 LTSINED 379 L ++ D Sbjct: 138 LAALEND 144 >gi|115359250|ref|YP_776388.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gi|115284538|gb|ABI90054.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 605 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 84/400 (21%), Positives = 171/400 (42%), Gaps = 63/400 (15%) Query: 52 WWESFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 W + D L++LV A + N L + QA RI A+ L ++ A++S + Sbjct: 70 WVKQLQDPQLDELVAEASRNNPDLQVAQARLRIAQAQLRQFDSLTGLTGTAGATVSRARM 129 Query: 110 P---NLKTNSTG------QLDSD-------------WKIDLFGQRRHIESSLANL-DSAY 146 P ++ S G ++ D +++DL+G+ R SL +L D+ Sbjct: 130 PKPGDVADVSVGGYRVPVEIFGDPVVSPSSIFVGLTYQLDLWGRNRAATKSLMSLRDATG 189 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 + + +L + ++ Y ++ A+ + DL ++ +++S +++ V Sbjct: 190 VEAEQVRLTLAVAIVTVYC-------QLDQAYAVRDLLQQKLKISQ---------RVTAV 233 Query: 207 KLEAEIKSIESDIPTLEKSFR-------MNVHN---------ISTLLGYPATEFLHYMQK 250 E + +++ + S + M +++ + L G L + Sbjct: 234 LRERTARGLDNAYDASDASIKRTRLLEQMALNDEQIKLAQLQLGVLSGRGPERGLSLQRP 293 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNG 307 + F P +P + PADL+ RPDI ++ + A ++ YP + +L G Sbjct: 294 RVGAF-PGGALPARL--PADLLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGG 350 Query: 308 SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 ALT + F S GP + LP+FD+G++K+ + + A + +TV +A+ Sbjct: 351 VFALTPASLFSRDAIAGSVGPAISLPVFDRGRLKAKLGADVAQADVAIGLYNKTVDDALG 410 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 +V +TS+ + +V + Q AV +K + ++ +R+G Sbjct: 411 QVAQIVTSLQTAQTLVAQQQDAVAAAQKIVQIAADRHRRG 450 >gi|167565778|ref|ZP_02358694.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia oklahomensis EO147] Length = 260 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 28/250 (11%) Query: 17 GCTVGPEYTKPHMPL------------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ P S S N + W E F D L +L Sbjct: 3 GCTLAPRYERPAAPVSGAFPTDGVYAAQPGAASGARSANGQTAADIGWREFFVDPRLQRL 62 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQ-- 119 + IAL+ N + + + A++ RA LFP+ + R+ + T TG+ Sbjct: 63 IDIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLDGTGTGAIQRYPSGVST--TGRPL 120 Query: 120 --------LDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 121 ISRAYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLALLST 180 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + + + L + + +L+ L+F G S+L L + + +++ ++ ++ V Sbjct: 181 DDLLQVTENTLKTARASYDLTKLQFDNGTGSELDLRQAQTVVETALANQQAQARARAQAV 240 Query: 231 HNISTLLGYP 240 + + L+G P Sbjct: 241 NALVLLVGEP 250 >gi|42522458|ref|NP_967838.1| outer membrane export factor [Bdellovibrio bacteriovorus HD100] gi|39574990|emb|CAE78831.1| outer membrane export factor [Bdellovibrio bacteriovorus HD100] Length = 434 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 84/395 (21%), Positives = 162/395 (41%), Gaps = 41/395 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS------------ISHR 107 +L + + ALQ+N T+ E++ +E + VR +FP A+ ++ + Sbjct: 33 TLQEAYQSALQKNETVGIQNEQVQQIRERVKQVRGGMFPQINANATYFMQPAPSDPVAKQ 92 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI---AKLNVISKLIPSY 164 F P +T T L ++ LF R + D +Q +I A + + + SY Sbjct: 93 FFPERQT--TVALTANQV--LFRGLREFAAVRQQKDLVQSQAEIRNQALIQLYQDVTSSY 148 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ ++ + L +Y + ++ + +G +S + ++ ++ ++ + Sbjct: 149 LNILTLEQDLDNISVQLKIYDERVKELSSRVRRGESSSSDALTAQSSQAALNAEFEIITG 208 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 + +M + L G P TE L P L + + P D I +R D++ Sbjct: 209 NLKMAREAFAFLTGLPTTEPLT---------DPELAKSVKVA-PLQSYLDRIESRHDVKA 258 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 + ++ IAK +PSL L G+ + F + +W KL +P+F+ G Sbjct: 259 ARSQHQAMEEEVSIAKGAHWPSLDLTGNYYFKRPDGF-SEDLNWDVQLKLTVPLFEGGTT 317 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +S +R A S E + A +E+ + K V L+ A EL +++ + Sbjct: 318 QSRVREAASKRIEADLLLSRLRRQADQEIRAYYENFKTRLKQVEALEKAGELSERNYKVL 377 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 +YR+G L +D++ A D IA R L Sbjct: 378 QKDYRRG---LARNIDVQMAL----TDFRIAARAL 405 >gi|78188605|ref|YP_378943.1| outer membrane efflux protein, putative [Chlorobium chlorochromatii CaD3] gi|78170804|gb|ABB27900.1| outer membrane efflux protein, putative [Chlorobium chlorochromatii CaD3] Length = 470 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 89/400 (22%), Positives = 174/400 (43%), Gaps = 43/400 (10%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 +S N +L + ++I LQ+N T+ A + A + I AD+ P ++S + +LK Sbjct: 40 KSGNAVTLEEALQIGLQRNRTLEVARLDRDIAHQKIRETWADVLPK--LTLSGTYTRSLK 97 Query: 114 TN----------STGQLDS----------DWKIDLFGQRRHIESSLANL-----DSAYAQ 148 + +G+L + D + LF AN+ D++Y + Sbjct: 98 PSVLLLPPNPLFPSGELQTSSDNAAFVGLDLRQPLFNASAMAGIRAANIVRSLSDASYRK 157 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 ++A V++ + +Y D +E++ + Q + ++++ + F QG + + +K Sbjct: 158 TEMA---VLTDIKLAYYDVLIAREQVKLIEQSIARWEQSRRDTRALFRQGIAADIDTLKA 214 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 ++++ D E + + L+G PA + K P + Sbjct: 215 FLSVENLRPDFIQAESRVASAMTTLKNLMGVPADSAIVLSGKLELPSGTKASYPATTELA 274 Query: 269 A-DLIRNRPDIRYQEKKLADSVAK-IGIAKSDLYPSLSLNGSIALTHDNSF-PGYN---T 322 A + RPD+R Q AD+ A+ + K++ YP LSL G L SF G N + Sbjct: 275 AREAFEQRPDLR-QIALQADAEAENVNSLKAERYPLLSLFGK--LEAQTSFNDGINPSES 331 Query: 323 HW----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 W S G +L LP+F + + I +A S ++ +E + E+E AL ++E Sbjct: 332 RWPVSSSAGVQLSLPLFTGYRTSARIEQATLSRRQTLTRLEEQKASVRAELETALLHLHE 391 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ + + + ++S ++S + +R+G S L++ D E Sbjct: 392 AQQRIEVQSKTIAVAERSYTISRLRFREGIGSRLELSDAE 431 >gi|85859625|ref|YP_461827.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] gi|85722716|gb|ABC77659.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] Length = 431 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 80/381 (20%), Positives = 167/381 (43%), Gaps = 44/381 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTG 118 +L + ++ AL + I A I + I RA+ +P ++ + R P Sbjct: 38 NLKRCIETALLYHPVIQAARSTIRIGESRIGQARANYYPQVNWQTEYSRTHPATSRVVEQ 97 Query: 119 QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--------------VISKLIPSY 164 + +D++I++ + L + QVDI KLN ++ + +Y Sbjct: 98 KTYNDYRINV-----GLNQMLYDFGKTKTQVDIQKLNTESSRQDLSRVETEIVFGVQQAY 152 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ + +A + + ++ ++E + F GA K + K E ++ + + E Sbjct: 153 YSLVQAQKNLEVAIETVSQFQHHLEQAKGFFEAGAKPKFDVTKAEVDLSNAILNRIRAEN 212 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQ 281 + R+ N++ +G P + Y+ ++ P Y I +P+ L + RPD++ Sbjct: 213 ALRITRVNLNNAMGIP--DIPEYVIDET--LLPETYA---IDLPSALEKAYAVRPDLQSV 265 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 +K++ + A + +AK YP L+ N + FP W+ G L +P+F+ + + Sbjct: 266 KKQVEAAEAAVNLAKKGYYPYLTGNAGYGFGGGD-FP-LGEGWNVGAALNVPVFNGLETR 323 Query: 342 SNIRRAESS-----AQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKK 395 ++ A +S AQEQ T+L ++ EVE A +++ E ++ Q AV ++ Sbjct: 324 YSVEEARASLDVVKAQEQ------TLLQQVRLEVEEAFSNLREAEERTVAAQMAVRQAEE 377 Query: 396 SMSLSMINYRQGRYSLLDILD 416 ++ L+ Y G + +++ D Sbjct: 378 NVELATGRYDAGVGNPIEVTD 398 >gi|241768206|ref|ZP_04765646.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241360358|gb|EER57550.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 186 Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Query: 291 KIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 ++G+A+ +P+++L GS + F W G L LP+FD G+ + I A Sbjct: 12 RVGVAQKAWFPAVTLTGSAGHASPELGDLFKWSARAWGVGALLSLPLFDGGQRNAQIEGA 71 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 ++ + + VLNA ++VE+ LTS+ AV ++ LS YR G Sbjct: 72 KARLEAAMADHRGQVLNAFRDVEDQLTSLRLLSGQAQAQARAVTAAHRATQLSDARYRNG 131 Query: 408 RYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 S L++LD R+ + E+ + A+ + V L A+G G+ Sbjct: 132 LVSQLELLDARRSELRNRRQELQVRTAQYM---ATVGLIRALGGGWG 175 >gi|332295952|ref|YP_004437875.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] gi|332179055|gb|AEE14744.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] Length = 444 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/281 (22%), Positives = 133/281 (47%), Gaps = 19/281 (6%) Query: 175 SIAHQILDLYKKNIELSHLKFTQ-----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++A Q DL K IE L+ TQ G +K+ +++++ + I+ ++ + + Sbjct: 173 NVASQEADL--KQIE-EQLRVTQAMYNAGTAAKIDVLRVQVALAQIKQNLLDAKNQRDLA 229 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 +++ L+GYP L + Q PN+ ++ + A + RPD+R + Sbjct: 230 YSSLNNLIGYPMNTKLILAKDQDV---PNITGSVD-DLTAKAVSFRPDLRAARFAAEAAK 285 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA-- 347 I +AK+ P ++ ++ FP N W ++ +PI++ G I+S I++A Sbjct: 286 KLIWVAKTKRLPDFTVTAYKEWVDNHFFPN-NQDWGAVVEMTIPIYNGGVIRSQIQQAII 344 Query: 348 ESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 QE Y ++ + + +K +V+ A+ ++ K+ + + +V ++S+ L+ + Y+ Sbjct: 345 AYRTQEDY---EKQIFDQVKLDVKQAILNLLSAKQRIDTIAQSVSEAEESLRLARVRYQA 401 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 G ++ ++LD E + + + AK + LY AIG Sbjct: 402 GVNTISEVLDAEAQLSTSQTQYAQAKFDYQVAKAALYKAIG 442 >gi|332532606|ref|ZP_08408483.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505] gi|332038027|gb|EGI74475.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505] Length = 470 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/419 (18%), Positives = 175/419 (41%), Gaps = 10/419 (2%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNK 63 L A L LAGC + + + N+ D WW+ N LN+ Sbjct: 13 LTASAVLVAAFLAGCASKIDTMSEQKAVNEFVAKANIASNVSVADETNWWKKLNSDQLNE 72 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIPNL-KTNSTGQL 120 LV AL N + + + +A + +A P ++ + P++ S+ + Sbjct: 73 LVTGALANNYNLQTSQLTLKSALARLGEQKAQYLPQGGVNVGAARSDAPSVFDRQSSANV 132 Query: 121 DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 DW++DLFG+ ++++ A+ S QV + ++ V+S ++ ++ + E+ I Sbjct: 133 ALDWQLDLFGRITALVDAANASAMSQAEQVRLLQIEVVSSVVKGFVSYQGNVEKQHIVAL 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 ++ +++I++ + +G ++L L + A+++ ++ +P +E + ++ ++ L G Sbjct: 193 QIEALEQSIDVLQARVDEGVANELDLNRTMAQLRQQQALMPAIEYAKYSDLSALAVLSGK 252 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL 299 A ++ + + + + + + A I RPDI + + + A L Sbjct: 253 LAQNI--AIENEQSVLERDFSVALKNANNA--IALRPDISRALFDFSQANSLSVAASKAL 308 Query: 300 YPSLSLNGSIALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P +SL+ + +S NT W P+L + + + + ++ Y Sbjct: 309 LPDISLSAFAGVVSIDSTGLKNTDQQWQVAPQLQWSLLSYPALLAQRDAQQFLSEAAYSD 368 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +Q+ VL A+ E E +L + + + K+ + Y +G+ L++LD Sbjct: 369 YQQVVLTALSESELSLQLLVNQAQQKRFADERYDFANKAFLQAQAMYEEGQIPYLELLD 427 >gi|238020198|ref|ZP_04600624.1| hypothetical protein GCWU000324_00073 [Kingella oralis ATCC 51147] gi|237868592|gb|EEP69596.1| hypothetical protein GCWU000324_00073 [Kingella oralis ATCC 51147] Length = 485 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/340 (23%), Positives = 151/340 (44%), Gaps = 14/340 (4%) Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQV-DIAKLNVISKLIPSYIDARHFKERISIAH 178 L + W D+FGQ++ + + A+ A+L + ++ Y++AR + R A Sbjct: 149 LSASWSPDIFGQKKSDAEAARQVALGEAERWHGAQLMLAAETAQHYLNARALEARQVQAA 208 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Q + K + +F G S + ++EA++ + +++ TL+ +V +I+ L G Sbjct: 209 QRIGSLKNLLRYVQARFKAGHVSAYEVRQVEAQLAAAQAETATLDAQRAAHVRSIAVLTG 268 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 F + N NL P D++ RPD+R E++ + AK+ AK D Sbjct: 269 QVPQGF--RLPASGANILANLPAAPQGATPLDVLTRRPDVRAAERQARAATAKLASAKMD 326 Query: 299 LYPSLSL-----NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P + NG I L + S +T + +P+F G+I++NI A++ Q Sbjct: 327 RLPRFDIQFAWSNGRIGLDSNLSSVAKSTGGLLSAGVTVPLFTAGRIRANIAAADARVQA 386 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR---QGRYS 410 + TVL A+ EV+ +S + + + + A + +S + + R G+ + Sbjct: 387 AAAQYDNTVLTALAEVD---SSYHLQRGLFDQRARAADATAQSSRQARQSRRLFELGKLT 443 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L L E ++ + L A+ ++ + LY A+G G+ Sbjct: 444 LDQALTAEINASQAQEALVRARLAEGENLLRLYQALGGGW 483 >gi|329954282|ref|ZP_08295376.1| type I secretion outer membrane protein, TolC family [Bacteroides clarus YIT 12056] gi|328527988|gb|EGF54974.1| type I secretion outer membrane protein, TolC family [Bacteroides clarus YIT 12056] Length = 457 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 58/331 (17%) Query: 61 LNKLVKIALQQNLTILQATERINA--AKENILSVRADLFPSSYASISHRFI--PNLKTNS 116 L + AL+QN+TIL+ R+NA A+ ++ + +A LFPS AS+S R + PN +TN+ Sbjct: 38 LQTCIDYALRQNITILK--NRLNAESAEVDVKTAKAALFPSLTASVSQRIVNRPNSETNT 95 Query: 117 ------------------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--NV 156 + +D++W + G +R +++ A++ +A+ N+ Sbjct: 96 IIDGDNITSSQSKTSYNGSYGIDANWTL-YNGSKRLNTLKQQRMNNRIAELSVAESENNI 154 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + Y+ + E + + L + + E + G+ +K L +LEA++ + Sbjct: 155 EESITQIYVQILYAAEAVKVNEATLAVSRAECERARALLAAGSIAKSDLAQLEAQVSTDN 214 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP---- 268 + T + +TL Y LYIP N+ P Sbjct: 215 YQLVTAQ----------ATLQDYKLQLKQLLELDGEKEM--TLYIPTPGDENVLSPLPSK 262 Query: 269 ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPG 319 D+ R+ RP+I + S I IA+S P++SL+ I T+ N Sbjct: 263 TDVYRSALTLRPEIEAGRLNVKASELDIDIARSGYIPTVSLSAGIGSTNTNGNDFTFGEQ 322 Query: 320 YNTHW--SFGPKLYLPIFDKGKIKSNIRRAE 348 +W S G + +PIF+ + KS +++A+ Sbjct: 323 IKQNWNNSLGVTVSVPIFNNRQTKSAVQKAK 353 >gi|258406559|ref|YP_003199301.1| outer membrane efflux protein [Desulfohalobium retbaense DSM 5692] gi|257798786|gb|ACV69723.1| outer membrane efflux protein [Desulfohalobium retbaense DSM 5692] Length = 453 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 78/410 (19%), Positives = 164/410 (40%), Gaps = 32/410 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP------NLK 113 +L + V+ AL+ N + A R+ A+ + + R L PS+ + + ++ Sbjct: 34 TLGQAVQTALEDNHRLEAAGARVRGAQAGVKAKRGSLGPSAKVDYGYTRLDEEPTAFGIQ 93 Query: 114 TNSTGQLDSDWKID--LFG--------QRRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 + Q D+ + LF Q+ +ES A L+ + +L V ++ + Sbjct: 94 SGEQNQWDAHLNVSQPLFTGLWLLSGYQKAQLESDRARLE-----LQDLRLTVALQVQTA 148 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 ++D +E ++IA L + +++ + G KL +++ E ++ E D+ + Sbjct: 149 FLDLIKARENVTIAQDALRQLRAQRDVAQSFYEVGVKPKLDVLQAEVDVAGAEQDLLAAQ 208 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 + ++TLLG PA + Y S +F P +P+ + A ++RPD+ +K Sbjct: 209 NRVQTQKARLNTLLGRPAQSEVTYT--GSLDFTP-FPLPLKTCM-AIAKKHRPDLALAQK 264 Query: 284 KLADSVAKIGIAKSDLYPSLSLN------GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 + + S YP +S N G N + + W ++ IF+ Sbjct: 265 SVQIGEKAVREIASARYPQISANYDYYRAGDTPAVDGNEYQD-PSEWRLSARMQWEIFNS 323 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G I +A Q + A EV+ A + + +K + + A++ ++ Sbjct: 324 GNTTYQIAQAREQVQGLQAEARNADTEAQYEVKAAFLRLEQAQKQIRVARKAIQEAEEGY 383 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ Y + D+L+ + + L+ A ++ L+ A+G Sbjct: 384 RIAQERYANQVGTNTDVLNAQARLTQSRGRLTTAMADYQQAMAQLFNAMG 433 >gi|224026816|ref|ZP_03645182.1| hypothetical protein BACCOPRO_03573 [Bacteroides coprophilus DSM 18228] gi|224020052|gb|EEF78050.1| hypothetical protein BACCOPRO_03573 [Bacteroides coprophilus DSM 18228] Length = 185 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 91/184 (49%), Gaps = 7/184 (3%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-----WS 325 ++ NRPD+R E++L + A S YPS++L+G+ T NS G T+ S Sbjct: 1 MLSNRPDVRVAERELEQAFYVTNQANSAFYPSITLSGNAGWT--NSIGGLITNPGKFVTS 58 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L P+F++G + + + A++ +E + +++ +L+A EV +AL S KK Sbjct: 59 ALASLTEPLFNRGTLIARRKIAKAQQEEALLAFRQKLLDAGSEVNDALVSYQTSKKKKEN 118 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + V + + + + + G + L++L + ++ + + + +S ++LY A Sbjct: 119 YEQQVASLETAFNSTSLLMEHGNTTYLEVLTARQTLLSAQLSQTANQFKEIQSMINLYQA 178 Query: 446 IGSG 449 +G G Sbjct: 179 LGGG 182 >gi|222875027|gb|EEF12158.1| predicted protein [Populus trichocarpa] Length = 314 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 34/293 (11%) Query: 13 VLLAGCTVGPEYTKPHMPLLPT------------QFSIGNSKNLINIDTLKWWESFNDTS 60 ++LAGC++ P Y P P T Q+ +WW+ F D Sbjct: 15 LVLAGCSLAPTYKVPETPTASTFKEAEAAAAEGAQWKTATPAE--GQHRGEWWKVFGDAD 72 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS-HRFIPNLKTNS--- 116 L++L+ A N + A R+ A+ + ADL+P A S R P+ + Sbjct: 73 LDRLIDAANAYNQDLAAAAARLKQARAFTGATEADLYPQLSAGFSPTRAQPSAASQGLPD 132 Query: 117 ----------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +L +++++DLFG+ + ++ A+ A +L + + +Y Sbjct: 133 GTRVSPQTVYQARLIANYELDLFGRVANSVNAARADEQGAEDLYRSVQLALQADTAQAYF 192 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 R + + + L + + L ++ G T+ L + EAE+ + +D+ +E+ Sbjct: 193 ALRTLDSDRDLLNATIKLREDALTLLRKRYEAGETTDLDPARAEAELGTARADLAGIERR 252 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 H ++ L G ++F + P + +P G+P++L+ RPDI Sbjct: 253 RANQEHALAVLTGVSPSQFALAARPFDT---PPVAVP--AGLPSELLERRPDI 300 >gi|167725492|ref|ZP_02408728.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei DM98] Length = 189 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 1 MPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 60 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 61 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 120 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQLAKSY 439 Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R L Sbjct: 121 KAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---R 176 Query: 440 VDLYIAIGSGYN 451 V L A+G G++ Sbjct: 177 VGLIGALGGGFD 188 >gi|325279744|ref|YP_004252286.1| outer membrane efflux protein [Odoribacter splanchnicus DSM 20712] gi|324311553|gb|ADY32106.1| outer membrane efflux protein [Odoribacter splanchnicus DSM 20712] Length = 422 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 73/376 (19%), Positives = 167/376 (44%), Gaps = 50/376 (13%) Query: 69 LQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNLKTNSTGQLD 121 L+ N I ++ + +N A ++ ++ FP SY F+P Sbjct: 32 LEYNQDIQKSQQAVNGALYSLKGIKTGFFPKLDITGNYSYQLEKVEFLPG---------- 81 Query: 122 SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--------------NVISKLIPSYIDA 167 +D K D +G + ++ + + Q D+AKL N+I SY Sbjct: 82 TDLKHDNYGVEAGLVQNVYSGSAVRKQYDVAKLQHAIAQLSVEHTVDNMIYAADVSYWSV 141 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 + ++ Q + + ++ E+ + +F +GA SK ++ ++ +K E + T +++ Sbjct: 142 AANRNLYELSEQFVQIVRELYEIVNKRFEEGAISKTDVLMVQNRLKEAELQLNTNSTNYK 201 Query: 228 MNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 + +++ ++G P + +++ Q L++P G+ L R R D YQ + Sbjct: 202 TALQSLNIMMGVEPDAAVVL-----TDSIQKVLWVPKQEGLNKALER-RAD--YQSAIMG 253 Query: 287 DSVAKI--GIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 +AK+ +A+S P L++ G+ L D T ++ ++ +P+F G+ Sbjct: 254 IEMAKLQTDMARSKYLPQLAVGIKEKYGTTLLNVDGKAQWATTAYA---QINIPVFHWGE 310 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ N+R + + + + + KE+ NA ++ E K + + ++++ K +++L Sbjct: 311 MRQNVRLSRTQEWTKELERSQLKDQVSKELNNAWVNVIEISKKLEIVYSSLDIAKDNLTL 370 Query: 400 SMINYRQGRYSLLDIL 415 + +Y +G+ ++D+L Sbjct: 371 NTFSYNEGKLPIIDVL 386 >gi|237732185|ref|ZP_04562666.1| multidrug resistance outer membrane protein MdtQ [Citrobacter sp. 30_2] gi|226907724|gb|EEH93642.1| multidrug resistance outer membrane protein MdtQ [Citrobacter sp. 30_2] Length = 479 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 95/498 (19%), Positives = 198/498 (39%), Gaps = 77/498 (15%) Query: 3 ILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------ 50 + A+ LF VL++GC P+ + S+ N+DT Sbjct: 8 VTTALLPLF-VLMSGCA----------PMHDDRQSLSQQTPAANVDTTLPAALKNGWPDS 56 Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--------------- 95 +WW++++D LN L+ L+ + + A +RI A+ +V A Sbjct: 57 QWWKAYHDPQLNALIDSTLRNSPDMQVAEQRIQLAEAQAKAVEAQDGPEIDFSADVERQR 116 Query: 96 ------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQ 148 + P + + TN T L + W +DL+G+ R + + + + + A+ Sbjct: 117 MSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWNLDLWGKNRAEVTARIGAVKAREAE 176 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV-- 206 + + + S + Y + + ++ QI + I + + G TS + V Sbjct: 177 REQTRQLLASGVSRLYWEWQTQAALKTVLTQIETEQQNVITVDRQLYQNGLTSSVEGVET 236 Query: 207 -----KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 K E ++ + + +E ++ S L +T+ L ++ Q + Sbjct: 237 DIDSSKTEQQLNDVSGKMKVIEARLSALSNSQSVALKLHSTK-LPVVESQ---------L 286 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFP 318 P +G L+ RPD++ + S++ I AK+ YP ++L + AL + F Sbjct: 287 PSQLGY--SLLARRPDLQAAHWYIESSLSSIDAAKAAFYPDVNLMAFLQQDALHLSDLFR 344 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 L LPIFD G++ +N+ ++ + + + V++A+ +V A + + Sbjct: 345 HSAQQMGVTAGLTLPIFDSGRLNANLDITKAQSNLTVANYNKAVVDAVNDVARAASQV-- 402 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKR 433 + + K QH ++ + + + Q R++ I + AK+ + + + + Sbjct: 403 -ETLAQKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQG 459 Query: 434 QLAKSYVDLYIAIGSGYN 451 Q + + L A+G GY+ Sbjct: 460 QWLDASIQLTSALGGGYH 477 >gi|119356782|ref|YP_911426.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] gi|119354131|gb|ABL65002.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] Length = 463 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/283 (21%), Positives = 128/283 (45%), Gaps = 13/283 (4%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D AY A V++ + SY DA ++++ + Q +D +++ + + F QG + Sbjct: 148 DEAYRNTQAA---VVADIKHSYFDALISRDQLRLIQQSIDRWEEARKDTQAMFRQGVAAD 204 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + +K ++++ D+ E + + +G + K P Y Sbjct: 205 IDTLKAFLSVENLRPDLIQAEHRVGYTMTKLKNAMGISQDSEVLLTGKL--ELSPKAYPD 262 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT---HDNSFPG 319 + + + RPDI E ++ AK+ AK++ +P ++ G + +DNS G Sbjct: 263 DIVSAYREALELRPDIHQLELQVEAEDAKVFAAKAERFPVITAFGQLGSQTAFNDNSSFG 322 Query: 320 YNTHW----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 ++ W S G ++ LPIF + + + +A+ S + + +E A EVE L+ Sbjct: 323 -DSAWPVSASVGLQVSLPIFTGFRTSALVEQAKISRLQTRLRLEELKSTARAEVEVRLSG 381 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + E +K ++ + + ++S +S++ +R+G S L++ + E Sbjct: 382 LRESQKRISVQSKTIAVAERSYKISLLRFREGVGSRLELTEAE 424 >gi|182416252|ref|YP_001821318.1| outer membrane efflux protein [Opitutus terrae PB90-1] gi|177843466|gb|ACB77718.1| outer membrane efflux protein [Opitutus terrae PB90-1] Length = 459 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/397 (22%), Positives = 169/397 (42%), Gaps = 39/397 (9%) Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT 114 N LN + AL+ N I +A ERI + + +V A P S+ S H + ++ T Sbjct: 31 NRFDLNTAIAFALENNFAIRRARERIREQEGIVTTVTAAALPNVSAAGSYQHSGVQSVAT 90 Query: 115 NSTG-----QLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYIDA 167 S+G W++ L + A++ A + + A L++ + + + +D Sbjct: 91 GSSGVPLFIAKGPSWRMSLTASQTVFAGGGVRASIRGAEMEREAATLDLQAVVNEALLDV 150 Query: 168 RH-------FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 R +E+I + Q L+L + + + + G S ++ E + + + + Sbjct: 151 RTRFYDVLLAREQIKVQEQNLELLQSQLSYATQRAQAGTISAFERLRAEVAVANAKPPLI 210 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIR---NRP 276 + R+ + + +G+ A + + F L + P++ + A + +RP Sbjct: 211 RSRNNLRIAIEELRQAIGFRAEKL--GTGGEVPEFMGTLSFEPVSFELAAAMAAAQADRP 268 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY-LPIF 335 D+R EK A I +A+S YPSL+L L + SFG + L F Sbjct: 269 DLRRLEKLAAAQREGITVARSRYYPSLALGAGGDLRKGPT-------TSFGDSIKGLRGF 321 Query: 336 DKGKIKSNIR-------RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + +++ N R +A S A++ +T E L A EV A +I ++V +Q Sbjct: 322 AQSRLEVNPRATSGAIMQAGSQAEQAGLTESEARLAAEVEVRRAFFAIERASELVGAMQK 381 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDIL--DIERATAK 423 V ++++ L+ + + G + LD+L +E TA+ Sbjct: 382 TVGQAEEAVRLATMRFEAGVATQLDVLVAQLELTTAR 418 >gi|94313518|ref|YP_586727.1| heavy metal cation tricomponent efflux outer membrane porin [Cupriavidus metallidurans CH34] gi|93357370|gb|ABF11458.1| heavy metal cation tricomponent efflux outer membrane porin (CzcC-like) [Cupriavidus metallidurans CH34] Length = 431 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/316 (20%), Positives = 143/316 (45%), Gaps = 33/316 (10%) Query: 116 STGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +TGQ++ I+L G+R I ++ D A AQ+ + ++ + +I ++ + +ER+ Sbjct: 108 TTGQVN--LPIELGGKRSARIGAANRARDVAQAQLGTTQADLRASVIGAFFNVLVAQERV 165 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A +D+ + + + G S + K + E+ + + + + + +++ Sbjct: 166 RLAAGSVDIATRGANAAARRVAAGKISPVEETKAQVELANAQIERSEADAALVAARQSLA 225 Query: 235 TLLGYPATEFLHY--------MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 TL G P+ F + Q+ + +L G PA L E++L Sbjct: 226 TLWGNPSPRFTEADGNLDALPARPQATMLRQSLD-----GAPALL--------ASERELD 272 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNI 344 A+I + +S YP +++ S+ DNS P T+ G + LP+FD+ G + + I Sbjct: 273 RRQAEINVQRSRQYPDVTV--SVGAKRDNSSPERGTYPVLGVAIPLPLFDRNQGNLYTAI 330 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV-ELHKKSMSLSMIN 403 R+A+ +A E + T L +++ A + + + L+ V +++ + Sbjct: 331 RQADKAADE----LRATRLRLDHDLQQASSQLEVSRSSALSLRETVLPAAERAYQAASQG 386 Query: 404 YRQGRYSLLDILDIER 419 + G+++ L++LD +R Sbjct: 387 FEAGKFNYLEVLDAQR 402 >gi|311278878|ref|YP_003941109.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] gi|308748073|gb|ADO47825.1| RND efflux system, outer membrane lipoprotein, NodT family [Enterobacter cloacae SCF1] Length = 481 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 93/500 (18%), Positives = 202/500 (40%), Gaps = 79/500 (15%) Query: 3 ILRAIFSL-FIVLLAGCTVGPEYTKP---HMPL------LPTQFSIGNSKNLINIDTLKW 52 IL A L LL+ C E P +P LPT G ++ W Sbjct: 6 ILAAAIGLSLTALLSACAPSHETGAPLSQQLPASHVDNRLPTALQNGWPQS-------SW 58 Query: 53 WESFNDTSLNKLVKIALQ---------QNLTILQATERINAAK------------ENILS 91 W+ ++D LN L++ AL+ Q + + +A R+ A+ +S Sbjct: 59 WQDYHDAQLNGLIEQALRNAPDMQVAMQRIKLAEAQARMTQAQGGPEVDFGADIERQKMS 118 Query: 92 VRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVD 150 + P + + TN T L + W +DL+G+ R ++S + + + A++ Sbjct: 119 AEGLMGPFAATDPAQGTTGPWYTNGTFGLTAGWDLDLWGKNRAQVQSRIGVVKARSAEMA 178 Query: 151 IAKLNVISKLIPSYIDARHFKERISIA-HQIL---------------DLYKKNIELSHLK 194 + +L+ S + +++ + A Q+L LY + I S Sbjct: 179 QTR-----QLLASSVARLYWEWQTEAAVKQVLLQVKSEQNNIVSVDKALYSRGITSS--- 230 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 +GA + +++ K E ++ + ++ +E V+ L +Q++ Sbjct: 231 -VEGARNDINISKTEQQLTQVSGNMKEIEARLMALVNKQGASLNL----------RQASL 279 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P ++G +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 280 PAVKTQMPASLGY--ELLARRPDLQEAHWYIQSSMSEVDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F L LPIFD G++ +N+ A++ ++ + V++A+ +V Sbjct: 338 HLSDLFRNSAQQMGVTAGLTLPIFDSGRLNANLDIADAQRDLSVASYNKAVVDAVNQVAK 397 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 + + + + Q ++ + +S + + G S ++ ++ + + +++ Sbjct: 398 TASQVETLMEKNQQQQLVLKDAGRVVSQAQSRMQAGILSGAEVSMVKLPSLQEQINALQL 457 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 + Q + + L A+G GY+ Sbjct: 458 QGQWVDASIQLTSALGGGYH 477 >gi|289670703|ref|ZP_06491778.1| outer membrane efflux protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 146 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 322 TH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 TH WSFGP + + G + +R E+ A + TVL A++EV+ L+ +D Sbjct: 9 THAWSFGPLISWTLPSSGA-HARVRATEAGADAALAQFDNTVLQALREVQTTLSRYAQDM 67 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + L+ A + + + S + Y+ GR L LD ER A ++ L+ A+ Q+++ + Sbjct: 68 DRLHLLEQAQQQAELASSQNRRLYQGGRTPYLSSLDAERTLATADMTLANAQAQVSQDQI 127 Query: 441 DLYIAIGSGY 450 L++A+G G+ Sbjct: 128 QLFLALGGGW 137 >gi|149186328|ref|ZP_01864641.1| multidrug efflux system outer membrane subunit [Erythrobacter sp. SD-21] gi|148829917|gb|EDL48355.1| multidrug efflux system outer membrane subunit [Erythrobacter sp. SD-21] Length = 474 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 94/462 (20%), Positives = 187/462 (40%), Gaps = 31/462 (6%) Query: 15 LAGCTVGP--EYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 LA C GP E P P+LP +F + + L +D + L AL + Sbjct: 13 LAACAGGPPPEVATP-TPVLPPEFLY--APDAPTGTALAELLPQSDPGFDTLAAQALAGS 69 Query: 73 LTILQATERINAAKENILSVRADLFPS--SYASISHR----------FIPNLKTNS---- 116 T+ +A RI+ A+ A+ PS + AS++ + P + ++ Sbjct: 70 PTLGEALARIDQARAGADRAGAERLPSLGANASVTGQRTNPAQFGASLPPGVAIDTERVS 129 Query: 117 -TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L + W D+FG+ R E ++LA +D+A A + +++++ S ID R R Sbjct: 130 YAANLTARWDPDIFGRLRAQERAALARVDAATASSLAVRNALVAEIGASVIDWRTLDARQ 189 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + + + ++ L+ ++ G V+ + + S + L + Sbjct: 190 AAIEEDIAAAEELARLAGVREEAGIAPGFDRVRATSAADASRSRLAALASERARLTGRLV 249 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPIN-IGIPADLIRNRPDIRYQEKKLADSVAKIG 293 TL A + + + P +P + + +P+ L+ NRPD+ LA A++ Sbjct: 250 TLTAQGAAQVRSALAPDA----PEPALPESPVALPSTLLANRPDVLAAAATLAAEDAELA 305 Query: 294 IAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +P L+ G +A + + F + + + P+FD G+I++ I A + Sbjct: 306 ATARRRFPVFDLSAVIGLLAFSPSDLFDEDSLVGTLAASVAGPLFDFGRIEAEIDGAAAE 365 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + + +++ V A+ + E A + + +T Q +++ SL+ + G Sbjct: 366 ERAAFQSYRGAVYTALGDAEAAYGLVAAADRELTAAQAEAASLQRAASLAETRQKAGLAD 425 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L +L+ RA + A + ++ V L+ A+G P Sbjct: 426 FLTVLEARRAADASGERAAAALGRAQRARVVLWQALGGEAQP 467 >gi|325918104|ref|ZP_08180261.1| hypothetical protein XVE_4285 [Xanthomonas vesicatoria ATCC 35937] gi|325535690|gb|EGD07529.1| hypothetical protein XVE_4285 [Xanthomonas vesicatoria ATCC 35937] Length = 224 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 28/223 (12%) Query: 1 MNILRAI-FSLFIVLLAGC-TVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLK 51 M+ LR + S + +LA C TVGP Y P P F GN + + Sbjct: 1 MSGLRLLGLSAAVTVLAACSTVGPNYALPDQSAYQRPAANAAFLDTGNDQVQPGAPLPAR 60 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RADL 96 WW + D L+ LV AL+ N+ + A+ R A E + RA + Sbjct: 61 WWALYRDPMLDGLVAQALRDNVELKVASANLRRAAAVYEQAMDAGGFDYEVEAGVSRAQV 120 Query: 97 FPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLN 155 S+ A + +P + G+ ++ DLFG+ +R E++ A+ +A A +D+A++N Sbjct: 121 --SAEAFLQEEKLPVFNL-ADGKFGVSYQFDLFGKLQRGAEAAHADTQAAQAAIDLARVN 177 Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 V +++ SY++ H + +A L L +++ E++ G Sbjct: 178 VAAQVAGSYVEICHANHELHVAEHSLQLQQRSREITQRLIAAG 220 >gi|167717386|ref|ZP_02400622.1| outer membrane efflux lipoprotein [Burkholderia pseudomallei DM98] Length = 200 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 7/175 (4%) Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKG 338 E++ A + +IG+A + +P+L+L+ S F WS GP+L +FD G Sbjct: 1 ERRAAAANEQIGVAIAAFFPTLTLSASGGFQSSVWSQLFTLPARFWSVGPQLAATLFDAG 60 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS--INEDKKIVTKLQHAVELHKKS 396 + A ++ + ++ VL+A ++VE+ L S I E + +V + AVE + S Sbjct: 61 LRAAQTEAARATYDQDVAAYRAAVLSAFQDVEDNLASQRILEQEIVVQR--QAVESAQHS 118 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + +++ Y+ G L++L + L+ Q S V L A+G G++ Sbjct: 119 LDITLNQYKAGTVGYLNVLTAQTTAFSARQKLATLSGQRMVSSVGLVKALGGGWD 173 >gi|121600185|ref|YP_992736.1| hypothetical protein BMASAVP1_A1404 [Burkholderia mallei SAVP1] gi|121228995|gb|ABM51513.1| conserved domain protein [Burkholderia mallei SAVP1] Length = 152 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 63/120 (52%) Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIF+ G + +N+R +++ + + ++ VL A+++V+NAL + D+ L+ A Sbjct: 3 LPIFEGGALVANLRLSQAQQAQAALGYRRAVLLALRDVDNALAAYRTDQTRRDALRDAAA 62 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + L+ +YR G S +D+LD ER ++ QL V LY A+G G+ Sbjct: 63 AERTTFELARDSYRHGLVSFIDVLDAERELSQARQQYVQGSLQLTTDLVSLYKALGGGWQ 122 >gi|309778696|ref|ZP_07673470.1| cobalt-zinc-cadmium resistance protein CzcC [Ralstonia sp. 5_7_47FAA] gi|308922546|gb|EFP68169.1| cobalt-zinc-cadmium resistance protein CzcC [Ralstonia sp. 5_7_47FAA] Length = 417 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/388 (20%), Positives = 176/388 (45%), Gaps = 31/388 (7%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS 99 N+ L++ T+ E+ +L + +++A N T+ A + ++A + ++ R P+ Sbjct: 24 NAAPLVSSGTV--LEAPGPLTLERAMELASAGNFTLFAAQKEVDANEGAVMQART--IPN 79 Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVIS 158 + + + +TGQL+ ++L G+R I ++ + A AQ+ + + S Sbjct: 80 PEVAATMEDTRSESRTTTGQLN--IPVELGGKRSARIVAAEKGRELAQAQLATTRAELRS 137 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +I + + +ER+ +A DL K + + + G S + K + E + E + Sbjct: 138 NVIRGFFEVLVAQERVKLAQASADLAAKGAQAATRRVAAGKISPVEETKAKVEQANAELE 197 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADL--IRNR 275 + R +++ L G +F + Q +L +P G+ L + + Sbjct: 198 LDNANAELRSARASLAALWGNATPQF--------SAAQGSLDALPSRPGLTELLTELDHS 249 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPI 334 P + + +L A +G+ +S YP +++ S+ DNS N + + G + LP+ Sbjct: 250 PLVLADQVELDRRQALVGVERSRQYPDVTV--SVGAKRDNS---ANRNMAVLGVSIPLPL 304 Query: 335 FDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV-E 391 FD+ G + IRRA+ AQ++ + + + N +++ N LT ++ L+ + Sbjct: 305 FDRNQGNLYEAIRRADK-AQDEVLANRIRLSNEMQQASNELTV---SRRSAQTLKETILP 360 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIER 419 +++ S + + G+++ LD+LD +R Sbjct: 361 AAEQAYSAAARGFEAGKFNFLDVLDAQR 388 >gi|194333666|ref|YP_002015526.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] gi|194311484|gb|ACF45879.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] Length = 496 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/274 (21%), Positives = 129/274 (47%), Gaps = 10/274 (3%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AK ++IS++ +Y + E+++I Q ++K ++ S F+QG + + +K Sbjct: 184 AKADIISRIRKAYYNVLISDEQVTILKQSELRWEKALQDSRALFSQGVAADIDTLKAFLS 243 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-AD 270 +++I D+ E + ++G + S +QP L P +I A+ Sbjct: 244 VQNIRPDLIQAENRAAVARTEFKNIIGI--DPLRPVVLSDSLVYQP-LEQPGDIASAYAE 300 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHW---- 324 + +RPD+R E ++ + A+++ YP+++ G + +D+ +T W Sbjct: 301 ALDSRPDVRQLELQVEAEGENVSAARAEGYPAVTAVGQLQTQTQYDDGIKLGDTDWPVSS 360 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S G ++ +P+F IKS + +A+ + + N EV+ L+ ++E + + Sbjct: 361 SVGVEVSMPLFTGFGIKSRVEQAKIGRMQTLTRLDDLKANIRAEVQTRLSRLDESRSRIE 420 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + ++ ++S +++ + YR+G S L++ D E Sbjct: 421 VQEKTIQTAERSYAITRLRYREGVGSQLELADAE 454 >gi|261879639|ref|ZP_06006066.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333655|gb|EFA44441.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 506 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/289 (17%), Positives = 130/289 (44%), Gaps = 5/289 (1%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y +++ +A+ DL KK + +G ++ ++++ ++ + I + Sbjct: 216 AYWTVVSLRQKHKLANSYRDLVKKLDDDVAKMIKEGVATRADGLRVDVKVNEADMQITQV 275 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + + L G P E + + + N N+ +P + +RP+IR + Sbjct: 276 EDGLSLAKMLLCQLCGLPMDEDIKLADEDNENLNANVIAATGF-VPDSTLTSRPEIRLLQ 334 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY----NTHWSFGPKLYLPIFDKG 338 + S K + ++ P ++L G +T+ NSF G+ + W+ G + +P+++ Sbjct: 335 NAVELSTQKSKLIRAAYLPHVALTGGYLITNPNSFNGFQKKFDGMWNVGVLVQIPVWNWF 394 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + ++ A+SS + +E ++ + ++E +K ++ + ++ ++++ Sbjct: 395 EGNYKVKAAKSSTSIAAMELREAREKINLQIAQSRYKVSEAEKRLSMAEKNIKSAEENLR 454 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + I +R+G D++ + A K + A+ ++ S+V+L A+G Sbjct: 455 CAQIGFREGVMESTDVMAAQTAWQKAQSQKIDAEVEVKLSHVNLKKALG 503 >gi|291085142|ref|ZP_06570952.1| multidrug resistance outer membrane protein MdtQ [Citrobacter youngae ATCC 29220] gi|291072096|gb|EFE10205.1| multidrug resistance outer membrane protein MdtQ [Citrobacter youngae ATCC 29220] Length = 455 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 83/435 (19%), Positives = 176/435 (40%), Gaps = 48/435 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD--------------- 95 +WW+++ND LN L+ L+ + + A +RI A+ +V A Sbjct: 33 QWWKAYNDPQLNALIDSTLKNSPDMQVAEQRIQLAEAQAKAVEAQDGPEIDFSADVERQR 92 Query: 96 ------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQ 148 + P + + TN T L + W +DL+G+ R + + + + + A+ Sbjct: 93 MSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWNLDLWGKNRAEVTARIGAVKAREAE 152 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + + + S + Y + + S+ QI + + I + + G TS Sbjct: 153 REQTRQLLASGVSRLYWEWQTQAALKSVLTQIKNEQQNVINVDRQLYQNGITSS------ 206 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 ++ +E+DI + + ++N N + L Q P+ + +P Sbjct: 207 ---VEGVETDIDSSKTDQQLNDVNGKMKVIEARLSALTNSQSTVLKLHPSKLPTVESTLP 263 Query: 269 AD----LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYN 321 + L+ RPD++ + S++ I AK+ YP ++L + AL + F Sbjct: 264 SQLGYSLLARRPDLQAAHWYIESSLSSIDAAKAAFYPDVNLMAFLQQDALHLSDLFRHSA 323 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 L LPIFD G++ +N+ ++ + + + V++A+ +V A + + + Sbjct: 324 QQMGVTAGLTLPIFDSGRLNANLDITKAQSNLTVANYNKAVVDAVNDVARAASQV---ET 380 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLA 436 + K QH ++ + + + Q R++ I + AK+ + + + + Q Sbjct: 381 LAQKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLVLQGQWL 438 Query: 437 KSYVDLYIAIGSGYN 451 + + L A+G GY+ Sbjct: 439 DASIQLTSALGGGYH 453 >gi|324497307|gb|ADY39459.1| multidrug resistance outer membrane protein MdtQ [bacterium enrichment culture clone P56-1B] Length = 472 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 92/481 (19%), Positives = 196/481 (40%), Gaps = 63/481 (13%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKI 67 F +LA C PE+ + L TQ + + ++N +WW+++ND LN L+ Sbjct: 13 FAFILAACA--PEHAT--VSPLKTQTAAASVNTVLNHQDWPKNEWWKAYNDPQLNGLIAK 68 Query: 68 ALQQNLTILQATERIN---------------------AAKENILSVRADLFPSSYASISH 106 AL + A +RI A+ +S + P + + Sbjct: 69 ALSDAPDMQIARQRITLAEAQAKAAMAADGPQIDFSADAERQKMSAEGLMGPFALTDPAA 128 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 TN T L + W++D +G+ R +E+ + +++ A+++ + + S + Y Sbjct: 129 GSTGPWYTNGTFGLTAGWELDPWGKNRARVEARIGKVNAQKAELEQTRQLLASSVARLYW 188 Query: 166 D----ARHFKERISIAHQILDLYKKNIELSHLKFT---QGATSKLSLVKLEAEIKSIESD 218 + A + I H+ ++ + EL T +G + + K E ++ + Sbjct: 189 EWQTQAAAGEVLAQIKHEQDNIIGADRELYQHGITSSVEGVETDIDANKTEEQLAEVNGK 248 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + +E ++ S L A + + +P +G +L+ RPD+ Sbjct: 249 MKAVEARLVALTNSSSVTLTRHALPTV------------DAALPPTLGY--ELLARRPDL 294 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIF 335 + + S++++ A++ YP ++L + AL + F L LPIF Sbjct: 295 QEAHWYIEASMSEVEAARAAFYPDVNLMAFLQQDALHLSDLFRASAQQMGVTAGLTLPIF 354 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 D G++ +++ A++ + + V+ A+ +V + +E + + K +H ++ K Sbjct: 355 DSGRLNASLDIAQAQNNLSVANYNKAVVEAVNQVAR---TASEVETLTAKNRHQQQVEKD 411 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEV---DLS--IAKRQLAKSYVDLYIAIGSGY 450 + + + Q R+S + + A++ DL+ + K Q + + L A+G GY Sbjct: 412 AARV--VALAQARFSAGIVAGSRVSEARIPALREDLAGLLLKGQYVDATLQLTSALGGGY 469 Query: 451 N 451 + Sbjct: 470 H 470 >gi|114797724|ref|YP_761735.1| RND efflux system outer membrane lipoprotein [Hyphomonas neptunium ATCC 15444] gi|114737898|gb|ABI76023.1| RND efflux system, outer membrane lipoprotein, NodT family [Hyphomonas neptunium ATCC 15444] Length = 489 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 96/425 (22%), Positives = 173/425 (40%), Gaps = 35/425 (8%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR 107 +T W + FND +N+LV AL N T+ + A+ S R +PS A+ S Sbjct: 54 ETGNWLDQFNDPVMNELVAEALAANPTLESRAASLRASAALSRSARGQRWPSLSATASFG 113 Query: 108 FIPNLKTNSTG------------QLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 T G LD+ W+ DL+G+ I + A+ + A + +L Sbjct: 114 GTSTGVTLPAGGDDRINGEVYGLGLDASWEFDLWGRISNGIAQADADYAATAADLAATEL 173 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ ++ ++I + IA + ++ ++L+ + G L L + + Sbjct: 174 SIAAQTASAWISLNEALTQERIAVLTYEARQRVVDLTEPRVRAGIYGPLELRTARSVLAQ 233 Query: 215 IESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 E+ I + + LLG YP+ E + P L +G PA ++ Sbjct: 234 AEAAIAARRQFSNEATRRLEVLLGRYPSAEL------TAPAIIPELPPMEVVGNPALMLS 287 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPK 329 RPDI E ++ + + A+ L PSL L GS+ D P G Sbjct: 288 RRPDIAVLEARVVGAGLQAEAARLALLPSLGLTGSLGTNETDISDALDPTLIAARLIG-N 346 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT-----SINEDKKIVT 384 L P+F G + + A + A+ + L+A +EVENALT + ED + Sbjct: 347 LIQPLFSGGSLNAQRLAAIAQAEAAVANYAGAALDAWREVENALTADILLAQQEDAQ--- 403 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 A+E + + ++ Y G ++ +++D + E L+ A+ A++ + ++ Sbjct: 404 --GRALEEARFAEEIAERQYSSGTVNVFNLIDAQTRRLTAESQLATARADRARNRITYHL 461 Query: 445 AIGSG 449 A+G G Sbjct: 462 ALGGG 466 >gi|167908654|ref|ZP_02495859.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei NCTC 13177] Length = 187 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 11/191 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 1 MPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 60 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 61 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 120 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQLAKSY 439 Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R L Sbjct: 121 KAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---R 176 Query: 440 VDLYIAIGSGY 450 V L A+G G+ Sbjct: 177 VGLIGALGGGF 187 >gi|86156855|ref|YP_463640.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773366|gb|ABC80203.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 455 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/287 (20%), Positives = 124/287 (43%), Gaps = 32/287 (11%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V+ A+ V+ + +Y A + + ++ ++L++ + + + +++ GA +K+ L++ Sbjct: 157 VETARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRA 216 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-----PI 263 E + E D+ + +F ++TLL + +P+ + P+ Sbjct: 217 EIDRARAEQDVKRSQNAFASARIALATLL----------------DRRPDFDVVDPPEPV 260 Query: 264 ----NIGIPADLIRNRPDIRYQEK--KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + A +R+RPD++ +L V +A+ P+L G L ++ F Sbjct: 261 LAGDADALVAAALRDRPDVQAARVNVELQRGVRNQAVAR--YLPNLGAFGRYTLANEAGF 318 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 G N W+ G L + D G +S+IR A + E + L A +EVE A + Sbjct: 319 TGTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSASAELKARQEVEQAYLDME 378 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 + K + +L ++ L + +R G + ++ D ATA++ Sbjct: 379 SARANAAKAKEQRDLAAENQRLVDVAFRAGTATAVEQAD---ATAQL 422 >gi|288573389|ref|ZP_06391746.1| outer membrane efflux protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569130|gb|EFC90687.1| outer membrane efflux protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 435 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 83/407 (20%), Positives = 171/407 (42%), Gaps = 36/407 (8%) Query: 32 LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 + T+ +IG + ++ I + S +L V+I +++ + +L++ + ++ ++ L Sbjct: 1 MKTKKTIGIAVAMMAILSAAPPVSATSLTLEDAVRIGVEEGIEVLKSAQDMDKSEAGKLV 60 Query: 92 VRADLFPS-----SYASISHRFIPNLKTNSTG-QLDSDWKIDLFGQRRHI-ESSLANLDS 144 R+ LFPS Y R + NS G + + + G+ + + S A S Sbjct: 61 ARSALFPSLSLGGKYKRQDERHALAEEANSYGISITATQPVYTGGKATALLKQSQAYETS 120 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 V AK V +I + D H +E + A + + +++ K G ++ Sbjct: 121 VLETVTDAKETVAYSVIRQFYDVLHLRENVVAARDSMAFAESHLKEVVKKEALGIANRFE 180 Query: 205 LVKLEAE-----------IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + + E + I +ES L + RM+ + + G +F+ Y+ + Sbjct: 181 VTRAEQQLSGYRTQLITAINDLESAKIALLTTLRMDPESDVDISG--DLDFVPYVGDREG 238 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + + + NRPD++ L +I IA S L P + L S Sbjct: 239 SLERAMA-------------NRPDLKASLSSLETQRQEIQIAASGLRPKVDLKASYTWDD 285 Query: 314 DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVEN 371 G + W ++ +PI D+ K+ I +++ +++ + Q+ + AI+ EV Sbjct: 286 PKESDGTDDDDWEIALEVDVPILDRNVTKAQIMTEKANLRQKELDLQK-LREAIRSEVSQ 344 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 A ++ K+ V +EL +S+ L+ + YR+G + +D+LD + Sbjct: 345 AWLNLETAKQAVESTSKDLELASESLRLAQVGYREGVSTQIDVLDAQ 391 >gi|153952165|ref|YP_001398155.1| outer membrane efflux protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939611|gb|ABS44352.1| outer membrane efflux protein [Campylobacter jejuni subsp. doylei 269.97] Length = 456 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 82/390 (21%), Positives = 178/390 (45%), Gaps = 46/390 (11%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 M I+ +IF F L+ C G + + P L TQ + + +N+ T W+ S+++ Sbjct: 1 MKIILSIFLAFF--LSAC--GAKLSLPKEVDL-TQEQMKD----LNL-TYDWYRSYDNAK 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASISHRFIPNLK 113 LN+ + L N IN A++ +LS A DL+P+ ++ +L Sbjct: 51 LNEFLNFVLLNN-------SDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDLN 103 Query: 114 T-----NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIAKLNVISKLIPSYID 166 + N L+ +++D++G+ R S+ + SAY ++ K+++I+ + + Sbjct: 104 SGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAY-DLENLKISMINTALNDVFE 162 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +F + + L ++ EL K+ G +L L+ ++ + + ++ +++ Sbjct: 163 LAYFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIKQSLLKAKQNLLGNDQNR 222 Query: 227 RMNVHNISTLL----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + N+ LL G+ E+ + N+F+ + + IP + R D+R + Sbjct: 223 NLLIKNLQDLLTKQEGFAYIEYFKTLS--LNDFKT---LSPDFNIPLKALAYRADVRSKL 277 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 L + + + PS+SL G+++ + D+SF S K+ LP D G+ Sbjct: 278 NSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKF--EILSGNVKISLPFLDYGR 335 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEV 369 +K NI+ ++ + ++ I++++ + +A+ E Sbjct: 336 VKQNIKISQFAYEQLLISYEQALQSAMNEF 365 >gi|53717141|ref|YP_105610.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|53717488|ref|YP_105235.1| RND efflux system outer membrane lipoprotein [Burkholderia mallei ATCC 23344] gi|67642236|ref|ZP_00440995.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|121596583|ref|YP_990323.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|121596855|ref|YP_990067.1| NodT family efflux transporter outer membrane lipoprotein [Burkholderia mallei SAVP1] gi|166999556|ref|ZP_02265393.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] gi|254203196|ref|ZP_04909558.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei FMH] gi|254208532|ref|ZP_04914881.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei JHU] gi|52423111|gb|AAU46681.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|52423458|gb|AAU47028.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 23344] gi|121224381|gb|ABM47912.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|121224653|gb|ABM48184.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei SAVP1] gi|147746241|gb|EDK53319.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei FMH] gi|147751219|gb|EDK58287.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei JHU] gi|238523338|gb|EEP86777.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei GB8 horse 4] gi|243064390|gb|EES46576.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei PRL-20] Length = 531 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 313 LPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 372 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 373 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 432 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQLAKSY 439 Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R L Sbjct: 433 KAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---R 488 Query: 440 VDLYIAIGSGYN 451 V L A+G G++ Sbjct: 489 VGLIGALGGGFD 500 >gi|189219409|ref|YP_001940050.1| Outer membrane protein [Methylacidiphilum infernorum V4] gi|189186267|gb|ACD83452.1| Outer membrane protein [Methylacidiphilum infernorum V4] Length = 500 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 3/177 (1%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 + +RPD+ Q + L A + +A+ L P++S+NG LTHD P W+ Sbjct: 297 VGSRPDVLAQVQLLRAQKAGLAVARGMLGPTISVNGFYLLTHDPPVPNV---WNVNVITS 353 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF+ G S IR+ E+ + + ++ A + V + + N V +L+ VE Sbjct: 354 MPIFNGGLYTSTIRQQEALVHQVQLQLEDLKRQADENVRISFSLFNAAISQVVQLREEVE 413 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + ++++G +LLD+L ++L A+ V+L++A G+ Sbjct: 414 VGALYYAAQRDDFQRGVAALLDVLVALNTYQTARLNLFQAEMGARMQLVNLFVAAGT 470 >gi|323139714|ref|ZP_08074753.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] gi|322395020|gb|EFX97582.1| RND efflux system, outer membrane lipoprotein, NodT family [Methylocystis sp. ATCC 49242] Length = 529 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 196/491 (39%), Gaps = 59/491 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------WWESFNDT 59 ++ + +LLA C + + PT + L ++ K WW +F Sbjct: 21 SVAACSCILLASCMPTNQVERSQFIEQPTMTRTLSQSGLSVVEGEKAWPREEWWRAFRSA 80 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 L+ ++ AL N +A + + A I A L P +S S+ IP ++ Sbjct: 81 ELDAIIDKALADNQNYRKAQDALREADAAIRISGARLLPEINSLFSMRQSRIPQNGVVAS 140 Query: 118 -----GQLDSD----------WKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLI 161 G L+ W++D + + R + ++++ + + + ++L + + + Sbjct: 141 YNPEQGGLEKTMAFLNPLAMTWELDFWQKNRALLDAAIGEAAAQAGETEQSRLLLTTGVA 200 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS----KLSLVKLEAEIKSIES 217 +Y+ +++ +A ++ + ++ L+ ++ G + +++ EA ++ Sbjct: 201 RAYLRGYALTQQLGLASTLVRMRRELRALADTRYQTGLDTLDGVQIARTNEEAAVRREA- 259 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 T+ + + ++ L+G L + N +P ++ P +L+R RPD Sbjct: 260 ---TVRAAITLQRDALARLMGEGPDAGLAVFKGGGNIAPAQPALPKSL--PIELLRRRPD 314 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPS--LSLNG----SIALTHDNSFPGY-----NTHWSF 326 + + A+I AK+ PS L+L G S+ T + GY + Sbjct: 315 LAASLARAEAWAARIHAAKTLFLPSIDLALGGGFEASVTSTEISKLSGYLFNPSALGYVA 374 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + LP+F G++ N+ + + + +T+L A ++V +A+ ++ + Sbjct: 375 ASSIRLPVFQGGRLSGNLEIQRAEYDQAVDAYNDTLLQAAQQVADAIANLRRARSEFDSH 434 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLL-------DILDIERATAKVEVDLSIAKRQLAKSY 439 V+ + ++LS + R G D+LD + +E D IA Sbjct: 435 SRFVQARRTELALSKVRLRDGLRDRREILQESADLLDAIFSLRGLEGDRLIAA------- 487 Query: 440 VDLYIAIGSGY 450 VDLY A+G G+ Sbjct: 488 VDLYQALGGGF 498 >gi|254173991|ref|ZP_04880654.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254175803|ref|ZP_04882462.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|254176229|ref|ZP_04882887.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|160695038|gb|EDP85008.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|160696846|gb|EDP86816.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia mallei ATCC 10399] gi|160697271|gb|EDP87241.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia mallei ATCC 10399] Length = 495 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 277 LPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 336 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 337 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 396 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQLAKSY 439 Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R L Sbjct: 397 KAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---R 452 Query: 440 VDLYIAIGSGYN 451 V L A+G G++ Sbjct: 453 VGLIGALGGGFD 464 >gi|145219907|ref|YP_001130616.1| outer membrane efflux protein [Prosthecochloris vibrioformis DSM 265] gi|145206071|gb|ABP37114.1| outer membrane efflux protein [Chlorobium phaeovibrioides DSM 265] Length = 452 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 45/299 (15%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D AY + A L+ IS +Y DA ++++ + + + ++++ + + F QG Sbjct: 143 DEAYRNAESAVLSDISM---AYYDALISRDQLKLVEESIARWEESRKDTQAMFRQG---- 195 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + +DI TL K+F ++V N+ L T M + N +L P Sbjct: 196 ------------VVADIDTL-KAF-LSVENLRPDLIQAETRVNATMTRLKNTMGVSLETP 241 Query: 263 I------NIG---IPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 + ++G P DL + RPDIR E ++ KI +++ +P L+ Sbjct: 242 LVLLDTLSVGSRSYPGDLAAAWSEAMEKRPDIRQLELQVKAEKDKITAVRAERFPMLAAV 301 Query: 307 GSIA--LTHDNSFPGYNTHWSF----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 G + D+ ++ W G ++ LPIF +I S +++A+ AQ Q +T E Sbjct: 302 GQLESQTAFDDEVQLSDSRWPVSSWVGVQVSLPIFTGYRISSRVQQAK-IAQFQTMTRLE 360 Query: 361 TV-LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + NA+ E+E L++ E +K + + + ++ +S++ +R+G S L++ D E Sbjct: 361 DLRANAMAEIELRLSAWREAEKRIDVQSSTIAMAQRGYRISLLRFREGVGSRLELTDSE 419 >gi|220915575|ref|YP_002490879.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953429|gb|ACL63813.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 456 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/285 (20%), Positives = 121/285 (42%), Gaps = 28/285 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V+ A+ V+ + +Y A + + ++ ++L++ + + + +++ GA +K+ L++ Sbjct: 158 VETARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRA 217 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-----PI 263 E + E D+ + +F ++TLL + +P+ + P+ Sbjct: 218 EIDRARAEQDVKRSQNAFASARIALATLL----------------DRRPDFDVVDPPEPV 261 Query: 264 ----NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 + A +R+RPD++ + A + P+L G L ++ F G Sbjct: 262 LAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVARYLPNLGAFGRYTLANEAGFTG 321 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 N W+ G L + D G +S+IR A + E + L A +EVE A + Sbjct: 322 TNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSGSAELKARQEVEQAYLDLESA 381 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 + K + +L ++ L + +R G + ++ D ATA++ Sbjct: 382 RANAAKAKEQRDLAAENQRLVDVAFRAGTATAVEQAD---ATAQL 423 >gi|197120875|ref|YP_002132826.1| outer membrane efflux protein [Anaeromyxobacter sp. K] gi|196170724|gb|ACG71697.1| outer membrane efflux protein [Anaeromyxobacter sp. K] Length = 463 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/285 (20%), Positives = 121/285 (42%), Gaps = 28/285 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V+ A+ V+ + +Y A + + ++ ++L++ + + + +++ GA +K+ L++ Sbjct: 165 VETARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRA 224 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-----PI 263 E + E D+ + +F ++TLL + +P+ + P+ Sbjct: 225 EIDRARAEQDVKRSQNAFASARIALATLL----------------DRRPDFDVVDPPEPV 268 Query: 264 ----NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 + A +R+RPD++ + A + P+L G L ++ F G Sbjct: 269 LAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVARYLPNLGAFGRYTLANEAGFTG 328 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 N W+ G L + D G +S+IR A + E + L A +EVE A + Sbjct: 329 TNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSGSAELKARQEVEQAYLDLESA 388 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 + K + +L ++ L + +R G + ++ D ATA++ Sbjct: 389 RANAAKAKEQRDLAAENQRLVDVAFRAGTATAVEQAD---ATAQL 430 >gi|82702767|ref|YP_412333.1| Outer membrane efflux protein [Nitrosospira multiformis ATCC 25196] gi|82410832|gb|ABB74941.1| Outer membrane efflux protein [Nitrosospira multiformis ATCC 25196] Length = 479 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/329 (20%), Positives = 147/329 (44%), Gaps = 17/329 (5%) Query: 126 IDLFGQRR-HIESS-LANLDSAYAQVDIAKL--NVISKLIPSYIDARHFKERISIAHQIL 181 I+ G+RR IESS LA + D+A++ N + + S+ + ++ I +A L Sbjct: 132 IETAGKRRLRIESSELATEAVNFDVQDVARVLTNTVRR---SFYNLLLAQKTIKVARDNL 188 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 + Y++ + ++ ++ G +++ V++E E ++SD + ++ LLG+P Sbjct: 189 EHYREILRVNEIRLKVGDVAEMDFVRIEVESLKVQSDQDQARAALNQARADLLLLLGWPE 248 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + P + + + + RPD+R ++A + + +A+ + P Sbjct: 249 NSIEINAAETWPQATPEIALATQDQLVERALERRPDMRAARIRIAQARKVLTLAQRQVIP 308 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF--DKGKIKSNIRRAESSAQEQYITWQ 359 ++++ N FP G + +P+F KG+I S R +S++ + Sbjct: 309 DVTISAFYDRDQGNQFPRTG---GVGISIPIPLFYQQKGEI-SQARVGLTSSELALRQAE 364 Query: 360 ETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 V + + A S + ++ T + +E +K+ I Y++G +LD++D E Sbjct: 365 YDVRAEVMKASAAWQSADAIARRFETYVVKKIEALRKAQE---IAYQKGAVGVLDLIDAE 421 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R+ + +D A +K++ DL +A G Sbjct: 422 RSYRTIMLDYYAALANRSKAWADLLMAYG 450 >gi|322419260|ref|YP_004198483.1| outer membrane efflux protein [Geobacter sp. M18] gi|320125647|gb|ADW13207.1| outer membrane efflux protein [Geobacter sp. M18] Length = 431 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 79/372 (21%), Positives = 168/372 (45%), Gaps = 29/372 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 SL + ++IAL N + A+ R + L++RA L P+ + +++ Sbjct: 33 SLPQAIEIALNNNPDL--ASLRKEEGVLDALTLRAGLLPNPTLELEGETGALTGSSAENT 90 Query: 120 LDSDWKID-LFGQRRHIESSLANLDSAYAQVDIAKLN--VISKLIPSYIDARHFKERISI 176 L + L G +RH +A ++A + +A + ++ Y D +ER+ + Sbjct: 91 LSLGVSQEFLTGDKRHKRRVVAERETAAYRWQLADRGRALKEQVQEGYYDVLLAQERLGL 150 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 + + L ++ ++++ + G +L + ++ E+ E + +E++ + + + +L Sbjct: 151 VNHAITLNRQLLQVAEDRLAAGDIPELEMYLVKVELTRSEGTLIEMERALQESRSKLFSL 210 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADSVAKI 292 L L + N + + P+ +G+ DL RNRPD++ ++ S A++ Sbjct: 211 LA------LAPGASPALNGRLDSGAPLTLGV-TDLKELAFRNRPDLKALHATMSKSDAEV 263 Query: 293 GIAKSDLYPSLSLNGSIALTHD------NSFPGYNTHWSFGPKLYLPI--FDKGKIKSNI 344 +A++D P+L+ ++AL+ + G T + G K +PI FDK + Sbjct: 264 ALAETDAIPNLT--AALALSREAGSMEIGGIEGRETSYLVGVKFSMPIPVFDKNQAGLQE 321 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKIVTKLQHAVELHKKSMSLSMIN 403 R + S+ E I + N +EVE A S+ N DK + + + +++++L+ Sbjct: 322 ARVKRSSAE--IRVKGAASNVEREVETAYASLANADKVLSLYKSNIMRQLEENLTLTQEA 379 Query: 404 YRQGRYSLLDIL 415 YR G +L ++ Sbjct: 380 YRLGEVGILAVI 391 >gi|227327220|ref|ZP_03831244.1| outer membrane secretion protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 451 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 26/315 (8%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q+ A ++ +L +Y + +E+I++ Y++ +L+ F QG ++ +++ Sbjct: 133 QLRDASQQLLVRLFQAYTNVLFSREQIALVQAQQRAYREQYQLNQRLFQQGEGTRTDMLE 192 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 EA + E+ + + + +++ + TLLG P + + + F P P Sbjct: 193 TEARVNLTEAQLIEAQDNLDISLRELETLLGMPVG--VDQLAALTPRFTPQALQPAGYQH 250 Query: 268 PADL-IRNRPDIRYQEKKLADSVAKIGIA--KSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 L +R+ + + LA VAK GI ++ P ++L S T ++ YN + Sbjct: 251 WQSLALRHNAQLLALNQSLA--VAKYGIERNRAGHLPQVTLVASTRNTQSDTENSYNQKY 308 Query: 325 ---SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 S G ++ +PIF G + + R+ AQE+Y Q+T ++ T + Sbjct: 309 DTRSIGIRVSVPIFAGGGVSAATRQ----AQERY---QQTAREKDEQTATIQTELRRQFN 361 Query: 382 IVTKLQ---HAVELHKKSMSLSMINYRQ-----GRYSLLDILDIERATAKVEVDLSIAKR 433 +VT Q A EL +KS +L+++ Q G LD+L+ E+ DL+ A+ Sbjct: 362 LVTSSQAKIRAYELTEKS-ALALVTATQKSVQGGERVNLDVLNAEQQLYGARRDLTEARY 420 Query: 434 QLAKSYVDLYIAIGS 448 +++ L G+ Sbjct: 421 TWLTAWLQLRYYAGT 435 >gi|260580703|ref|ZP_05848529.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|260092520|gb|EEW76457.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 293 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 118/254 (46%), Gaps = 24/254 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW ++D LN++V+ AL N + +A +N A + V A+L P+ S +S + R Sbjct: 50 WWSLYDDAQLNRVVEQALINNKDLAKAAVAVNRALYSANLVGANLVPAFNGSTSSAAQRR 109 Query: 109 IPNLKTNST----GQLDSDWKIDLFGQR--RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 + ++ TNS G L+ + +DL+ QR ++++ + + ++ A+L++I+ ++ Sbjct: 110 V-DISTNSAISHKGSLNVSYTLDLW-QRLANTVDAAEWSHKATAEDMESARLSLINSVVT 167 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + IS ++ + Y + + QG S+ + + I + ++ Sbjct: 168 TYYQIAYLNDAISTTNETIKYYTDIGNIMQTRLVQGVADAASVDQAQQAILTARNNKLNF 227 Query: 223 EKSFRMNVHNISTLLGYPATE-----FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 E + + LL E F H M ++ +N+ +P +I NRPD Sbjct: 228 ETQRKTAEQTLRNLLNLKPNEALNITFPHIMNVKT--------AGVNLNVPVSVIANRPD 279 Query: 278 IRYQEKKLADSVAK 291 ++ + +L+ ++ K Sbjct: 280 VKAAQFRLSSALQK 293 >gi|121534950|ref|ZP_01666769.1| outer membrane efflux protein [Thermosinus carboxydivorans Nor1] gi|121306549|gb|EAX47472.1| outer membrane efflux protein [Thermosinus carboxydivorans Nor1] Length = 431 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/263 (20%), Positives = 124/263 (47%), Gaps = 15/263 (5%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + + +D +++ ++ G +K +++ E E+ + E ++ Sbjct: 148 AYFNLLQARNMVKLNQESVDRLAAHLQNVQAQYAVGTVAKSDVLRSEVELANAEQNLIKA 207 Query: 223 EKSFRMNVHNISTLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + S+ + V +++ +LG P TE + + + L I+ + +NRP++ Sbjct: 208 QNSYDLAVASLNNVLGLPLDTEISVKDDLKYDKYSLTLEEAIDYAL-----KNRPEVAQA 262 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 + + + + +AKS P++S GS T ++ PG ++ W+ G IFD Sbjct: 263 DLNVKSAEDGMQVAKSGQRPTVSFQGS--QTWSDTDPGRSSDSWALGLSASFNIFDGNVT 320 Query: 341 KSNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 + I++A+++ AQEQ ++ V EV A S+ E +K + + AV+ ++ Sbjct: 321 SAKIKQADAALAKAQEQARQTRDAVQ---LEVRQAYLSLKEAEKRIETTKVAVDKAEEDY 377 Query: 398 SLSMINYRQGRYSLLDILDIERA 420 ++ + Y G + LD++D + A Sbjct: 378 KIAQVRYSAGVGTNLDVMDAQVA 400 >gi|257485090|ref|ZP_05639131.1| outer membrane efflux protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 114 Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 53/96 (55%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS GP + FD G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + Sbjct: 15 WSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRL 74 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 L + + + L+ + YR+G L +LD ER Sbjct: 75 VSLMRQSDASRSAARLASVQYREGTADFLVLLDAER 110 >gi|325275405|ref|ZP_08141347.1| putative outer membrane protein precursor [Pseudomonas sp. TJI-51] gi|324099459|gb|EGB97363.1| putative outer membrane protein precursor [Pseudomonas sp. TJI-51] Length = 184 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 3/178 (1%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYL 332 RPDI E +LA + A + +A++ L+P+L+L+ S+A T D N + G L Sbjct: 3 RPDIAAAEARLAAAQADVRVARAALFPTLTLSASLA-TGDRQAADLLRNPVLNLGAGLTA 61 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ G++++ +A + +E T++ ++ + EVE AL S++ + Q A++ Sbjct: 62 PIFNNGQLRAERDKALARHEELLETYRGVLVTSFGEVEKALNSVDGLDRQARWQQQALQQ 121 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 +++ L+ YR G LL +L + + + + +R ++ V LY A+G G+ Sbjct: 122 AQRAFDLAESRYRAGAEDLLSVLQAQSSLFDAQAERVQLRRDRLQASVALYKALGGGW 179 >gi|167724859|ref|ZP_02408095.1| outer membrane lipoprotein [Burkholderia pseudomallei DM98] Length = 173 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPS--LSLNGSIALTHDNSFPG-YNTHWSFGPKLYL 332 PDI E L + A IG+A + L+PS LS +G T ++ G WS G + Sbjct: 1 PDILQAEAVLHAASANIGVASAALFPSVTLSASGGFDATRASALFGPAGRAWSVGASITA 60 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F G + + A + E +++TVL+A +V + L +++ D + A+ Sbjct: 61 PLFHGGALWYQRKAAVDAFDESNAAYRQTVLSAFAQVADTLRALDHDATALDAQARAMSA 120 Query: 393 HKKSMSLSMINYRQGRYSLLDIL 415 + + L+ + Y G L +L Sbjct: 121 ARDARRLATVQYEAGTAGYLQVL 143 >gi|238895700|ref|YP_002920435.1| multidrug resistance outer membrane protein MdtQ [Klebsiella pneumoniae NTUH-K2044] gi|238548017|dbj|BAH64368.1| putative channel/filament proteins [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 478 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 92/444 (20%), Positives = 183/444 (41%), Gaps = 71/444 (15%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D LN L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDPQLNNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADIERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYA-QVD 150 +A+ + L TN T L + W +DL+G+ R +++ + L + A Q Sbjct: 118 SAEGLMGPFATDTDGNTGPLYTNGTFGLTAGWDLDLWGKNRALVKARIGELKAQVAEQAQ 177 Query: 151 IAKL--NVISKLIPSYIDARHFK--------ERISIAHQILDLYKKNIELSHLKFTQGAT 200 +L +++L + K E+ +I LY++ I S +GA Sbjct: 178 TRELLSGSVARLYWQWQTEAAIKAVLQQVKNEQNNIVTVDKALYQRGITNS----AEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + +++ K + ++ + + +E M + N Q QS N +P Sbjct: 234 NDINVSKTDQQLADVTGTMKEIEARL-MALTN---------------SQSQSLNLKPASL 277 Query: 261 IPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTH 313 ++ +P +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PTVSAQLPDTLGYELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDALHL 337 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + F L LPIFD G++ +N+ A + + + V++A+ +V Sbjct: 338 SDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAKTA 397 Query: 374 TSI------NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 + + ++ +++ Q V+L + M+ ++ + + L L ER TA Sbjct: 398 SQVETLMAKSQQQQVEKDAQRVVDLAQARMAAGILPGSRVSMAKLPALQ-ERITA----- 451 Query: 428 LSIAKRQLAKSYVDLYIAIGSGYN 451 L + Q + + L A+G GY+ Sbjct: 452 LRL-HGQWIDASIQLTSALGGGYH 474 >gi|94313541|ref|YP_586750.1| RND efflux system outer membrane lipoprotein NodT [Cupriavidus metallidurans CH34] gi|93357393|gb|ABF11481.1| RND efflux system, outer membrane lipoprotein, NodT [Cupriavidus metallidurans CH34] Length = 476 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 160/389 (41%), Gaps = 45/389 (11%) Query: 7 IFSLFIVLLAGCTV-----GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 + +L + +LAGC + G + + +P L + N + + W +F+D L Sbjct: 11 LLALPVAMLAGCALQTPPKGEDLRQQTVPSLEGRAGWANPTSGDAVAD-GWLAAFDDAEL 69 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL- 120 +LV+ A+ N + A R+ A+ + R+ L PS A + R NS Q+ Sbjct: 70 QRLVREAIAHNGDLRLAEARVQQAQALVAIARSGLLPS--AGVKGR-----AGNSETQIL 122 Query: 121 --DSDWKIDLFG----QRRHIESSLANL--DSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 + W++DL+G + R ES A D +AQ IA +K S I ++ Sbjct: 123 SIGASWEVDLWGRIRAESRSAESQYAATQDDYLWAQRVIAA--TTAKAWFSLIRYTVLED 180 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 R+ Q + ++ + + + T G + L++ + + I + Sbjct: 181 RL---RQSATIQEELVRIVGQRVTIGIAPETDLLEARNTLHAQRDGIEKTALARSQAAQA 237 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LLG YPA + + P + N +PA+++ RPD+ ++A + Sbjct: 238 LELLLGRYPAGDI------ATAPTLPAMPPAPNASLPANVVERRPDLTAAAHRVAAAFDM 291 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSF-------PGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A++ P +S++ ++ + F P + +F + PIF G++K+ + Sbjct: 292 RQSAEAARLPRISISAAVTGIRSDVFLLNQAGSPVKGLNGAF----FAPIFMGGELKARV 347 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENAL 373 + + I + + L A+ EVE L Sbjct: 348 DYYTAEQKAALIAYGNSALRALGEVETGL 376 >gi|218665460|ref|YP_002424553.1| RND efflux system, drug efflux transporter, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517673|gb|ACK78259.1| RND efflux system, drug efflux transporter, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 484 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 35/201 (17%) Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--------ALTHDNSFPGYN 321 DL+ +RPD++ SV + A++ YP +S + + L + SF Sbjct: 294 DLLAHRPDVQAARALARASVQQTKAARAAFYPDISFSALLDMNSAHLATLLNPASF---- 349 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 +SFGP L LPIF G + R AE+ + +QE++L ++++V AL+ ++ Sbjct: 350 -AYSFGPALRLPIFTSGALTGRFRGAEAQQAKAVAVYQESILQSVRQVLTALSGYQHGRQ 408 Query: 382 I---------VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS--I 430 + T+ Q + +++ LS R +LL +R A + ++ + Sbjct: 409 VWQAEVVGTGATREQEKLTATAQALGLS------DRAALL-----QRQIALIHQQMTQRL 457 Query: 431 AKRQLAKSYVDLYIAIGSGYN 451 A +++ L A+G GY+ Sbjct: 458 AHYAALQAWAQLETALGGGYD 478 >gi|301061795|ref|ZP_07202528.1| type I secretion outer membrane protein, TolC family [delta proteobacterium NaphS2] gi|300444085|gb|EFK08117.1| type I secretion outer membrane protein, TolC family [delta proteobacterium NaphS2] Length = 511 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/280 (20%), Positives = 125/280 (44%), Gaps = 26/280 (9%) Query: 190 LSHLKFTQ-----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 L+ LK T+ G ++ +++ + + + D+ T + ++++ ++T +G+PA Sbjct: 213 LTSLKSTEQRKKAGVSTIADVLQARSRVDQVRLDLVTNRGAVKISLGELATAVGWPANAD 272 Query: 245 LHYMQKQS----NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 ++ N+ N I + + R+RPD+ L S A++ A+S L+ Sbjct: 273 FDVVEGPEDLPLNDISENTQTLIGLAL-----RDRPDLAAARANLRQSQAELKKAQSALW 327 Query: 301 PSLSLNGSIALTH-DNSFPGYN-----------THWSFGPKLYLPIFDKGKIKSNIRRAE 348 P L+ G+ + D +F + T + G L +P+F+ +++NIR AE Sbjct: 328 PRLTATGNAGWSGIDANFDASSYFDIGDINSSGTSYYGGLSLEIPLFEGFSLRNNIRAAE 387 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + ++ + I +V ++ ++ + V + + K+S +S+ YR G Sbjct: 388 AGVKAARADLRQKEESVISDVWSSFYNVQTAAQQVESSETLLISSKESFRVSLARYRAGV 447 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++++L+ + A+ L SY +L AIG+ Sbjct: 448 ADIVELLNAQSTLTSARTRRVQAQTDLFISYAELMHAIGA 487 >gi|198282188|ref|YP_002218509.1| NodT family RND efflux system, outer membrane lipoprotein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198246709|gb|ACH82302.1| RND efflux system, outer membrane lipoprotein, NodT family [Acidithiobacillus ferrooxidans ATCC 53993] Length = 481 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 35/201 (17%) Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--------ALTHDNSFPGYN 321 DL+ +RPD++ SV + A++ YP +S + + L + SF Sbjct: 291 DLLAHRPDVQAARALARASVQQTKAARAAFYPDISFSALLDMNSAHLATLLNPASF---- 346 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 +SFGP L LPIF G + R AE+ + +QE++L ++++V AL+ ++ Sbjct: 347 -AYSFGPALRLPIFTSGALTGRFRGAEAQQAKAVAVYQESILQSVRQVLTALSGYQHGRQ 405 Query: 382 I---------VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLS--I 430 + T+ Q + +++ LS R +LL +R A + ++ + Sbjct: 406 VWQAEVVGTGATREQEKLTATAQALGLS------DRAALL-----QRQIALIHQQMTQRL 454 Query: 431 AKRQLAKSYVDLYIAIGSGYN 451 A +++ L A+G GY+ Sbjct: 455 AHYAALQAWAQLETALGGGYD 475 >gi|167584835|ref|ZP_02377223.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 270 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 27/242 (11%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPHM---------PLLPTQFSIGNSKNLINIDTL---K 51 L A L + LLA C VGP+Y +P + P L G K D + Sbjct: 28 LAAASGLLVSLLAACAVGPDYKRPDVATPAAFKEAPTLAPGEQAGTWKTAEPSDAAHRGE 87 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW++F D L+ L AL N + A R+ A+ + R+ FP Sbjct: 88 WWKAFGDPVLDALEAQALAANQNLKAAAARVEEARAATRAARSQWFPQVGVGFGPTRQGL 147 Query: 99 -SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 S+ S+ P T Q ++ DLFG+ R++E+S A+ + A +L + Sbjct: 148 SSASQSLPQGSGPTTSTLWRAQGTVSYEADLFGRVGRNVEASRADQAQSEALFRSVQLAL 207 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + + +Y + R + + ++L + ++L +F +G S+L + + + E+ + + Sbjct: 208 QADVAQNYFELRRLDSDQDLYRRTVELRDQALKLVQRRFNEGDISELDVSRAKNELATAQ 267 Query: 217 SD 218 +D Sbjct: 268 AD 269 >gi|302037134|ref|YP_003797456.1| putative outer membrane protein TolC [Candidatus Nitrospira defluvii] gi|300605198|emb|CBK41531.1| putative Outer membrane protein TolC [Candidatus Nitrospira defluvii] Length = 448 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 78/384 (20%), Positives = 174/384 (45%), Gaps = 41/384 (10%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNSTG 118 L++ + + L+QNL +L A I ++K ++ R LFP+ A + + F TG Sbjct: 60 LSEAMALFLKQNLDLLIAKYGIESSKGQQITAR--LFPNPVAQLGNVASFTQGNTLAKTG 117 Query: 119 QLDSDWK--IDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 L + +L G+R + IES+ + SA A + A + + +Y + R+S Sbjct: 118 ALTMQVQQLFELAGKRGYRIESAGFGVQSAEADFEDAVRQLGFTIKDAYYRVLVAQRRLS 177 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD-IPTLE--KSFRMNVHN 232 +A + D + + ++++ ++F +G +++ L+++ ++ ++ I ++ +S R ++ Sbjct: 178 LAEENRDRFARILDVNTIRFKKGYIAEVDLIRIRLQVVDFQAQVIEAIQEGESARADLRQ 237 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 + L PA++ + P++ ++ + RPDI+ + L+ A + Sbjct: 238 LLRL--SPASKLELTTEMDYRRVDPDMGRLRSVALDV-----RPDIKSRRAALSQREADL 290 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----------KLYLPIFDKGKIKS 342 +AK+ P +++ GY+ S GP + LP+F++ + Sbjct: 291 KLAKAFRVPDVTIG-----------AGYSVQGSRGPDNQQMGILNLGVPLPLFNRN--QG 337 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK-LQHAVELHKKSMSLSM 401 I +AE Q TV +V+ A ++ + +++V L +E + + ++ Sbjct: 338 GIVQAEVGVQSAQAELDRTVNQVENQVDVAYQNLLQSRRLVEAYLAGVLEDARSTFTIVE 397 Query: 402 INYRQGRYSLLDILDIERATAKVE 425 Y +G ++LD+LD R + ++ Sbjct: 398 RAYERGGATILDLLDAARTSRTIQ 421 >gi|167900101|ref|ZP_02487502.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 190 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 11/190 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 5 LPAGLLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 64 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 65 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 124 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE----VDLSIAKRQLAKSY 439 Q A+ ++ ++L+ +R+G DI D+ + T E V+L +R L Sbjct: 125 KAQQQALRAAQRMVALAQDRHRRGMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---R 180 Query: 440 VDLYIAIGSG 449 V L A+G G Sbjct: 181 VGLIGALGGG 190 >gi|297172072|gb|ADI23054.1| outer membrane protein [uncultured gamma proteobacterium HF0770_07M15] Length = 224 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 12/195 (6%) Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NIGIPADLIRNRPDIRYQEKKLADS 288 V + L G PA + + + + IP+ +PAD++R RPD+ E +L + Sbjct: 7 VRRLDRLRGLPAGGSRYPITPLRSG---TIVIPVLPAKLPADILRQRPDLAAAEARLRSA 63 Query: 289 VAKIGIAKSDLYPSLSLNGS-IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK---SNI 344 A A +LYPSL + S +T + P + GP+L +PI+D +I+ S Sbjct: 64 FALERAAHLNLYPSLDMRLSGFTMTGSITDPFRSWMTEIGPRLEIPIWDPERIERLGSEQ 123 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 RA A E ++ L A +EVE A N ++ + V +K + Sbjct: 124 ARARVVAAE----YRALALRAFEEVETAAVQFNRRREQLKLADEIVRKAEKIRKFTADKL 179 Query: 405 RQGRYSLLDILDIER 419 R G S L++L+ ER Sbjct: 180 RVGLVSQLEVLEDER 194 >gi|167836877|ref|ZP_02463760.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia thailandensis MSMB43] Length = 219 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 19/190 (10%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSF 326 I RPDI + I +AK+ YP++ SL G +++ N WS Sbjct: 1 IGRRPDIVAARWTVDAQTRGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSA 60 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIV 383 GP L LPIF+ G++++ + A + E + +T++ A+K++ + L S++ +K Sbjct: 61 GPALTLPIFEGGRLRAQLGVASAGYDEAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDA 120 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSY 439 + AV L ++S LS + +G L D +++ A +++ E + +LA ++ Sbjct: 121 AR---AVSLTRRSYDLSHTGFSRG---LTDYVNVLIAQSQLLSAQESQTRVEAARLA-AH 173 Query: 440 VDLYIAIGSG 449 L +A+G G Sbjct: 174 ASLMVALGGG 183 >gi|224026817|ref|ZP_03645183.1| hypothetical protein BACCOPRO_03574 [Bacteroides coprophilus DSM 18228] gi|224020053|gb|EEF78051.1| hypothetical protein BACCOPRO_03574 [Bacteroides coprophilus DSM 18228] Length = 259 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 24/250 (9%) Query: 13 VLLAGCTVGPEYT-KPHMP--LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIAL 69 +LL+ C + Y + +P L + ++ ++ ++ NI+ W F D L +L++ L Sbjct: 13 LLLSSCGIYSSYQPQTSVPENLYGEEVAVSDTNSIGNIN---WRNFFTDPCLQELIEKGL 69 Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ-----LDSDW 124 QQN + A R+ AK ++LS + PS ++S + N + + + + W Sbjct: 70 QQNTDVQTAKLRVEEAKASLLSAKLAFLPS--FALSPQGSLNTAESQVSRTYTLPVTASW 127 Query: 125 KIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIP----SYIDARHFKERISIAHQI 180 +ID+FG+ R+ S +AYAQ + K V S L+ +Y E++ I+ Sbjct: 128 EIDIFGKLRN---SKRQAKAAYAQSEDYKQAVYSSLVANIANTYYTLLMLDEQLEISRTT 184 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + +K+ +E + G + ++ +++A +++ + LE+ +++S LL Sbjct: 185 AETWKETVESTQALMEAGQADEAAVSQMKATYFEVKNSVIDLEEQINQVENSLSLLLA-- 242 Query: 241 ATEFLHYMQK 250 E H +Q+ Sbjct: 243 --ETPHRIQR 250 >gi|191170060|ref|ZP_03031614.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli F11] gi|300981487|ref|ZP_07175568.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 200-1] gi|190909576|gb|EDV69161.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli F11] gi|300307560|gb|EFJ62080.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 200-1] gi|324013981|gb|EGB83200.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 60-1] Length = 478 Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 188/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENI---------------------LSV 92 ++D L L+ ALQ + A +RI A+ +S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 119 Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + PS+ + TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPSALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSAVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|292491750|ref|YP_003527189.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] gi|291580345|gb|ADE14802.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] Length = 444 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 51/284 (17%) Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 ++ +++ G + ++ E +E++ TLE+ R I+ LL P Sbjct: 169 IAEIQYAAGRAGQQDALQAEVARARLETEAVTLERRRREVQARINALLNRP--------- 219 Query: 250 KQSNNFQPNLYIPINIGIPA------------DLIRNRPDIRYQEKKLADSVAKIGIAKS 297 P +P+ G P +R P++ ++A + A+ G+A+ Sbjct: 220 -------PQTPVPLPAGFPELSPLPRLEQLQITALRAHPELARIRARIAGAKAQAGLAEK 272 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNT-------HWSFGPKLYLPIFDKGKIKSNIRRAESS 350 D YP L GYN+ W+ G + LP FD G +S A + Sbjct: 273 DFYPDFRLMA-----------GYNSFWDEPDKRWTLGFSINLP-FDYGHKRSAALDA-AR 319 Query: 351 AQEQYITWQETVLNA--IKEVENALTSINEDKKIV-TKLQHAVELHKKSMSLSMINYRQG 407 A + W+ T A + E+E + ++ E + ++ L+ L + ++ + +YR G Sbjct: 320 ANLRQARWRLTDREAQLLSELEASRAAVEETEAVIKVYLRRLAPLAQDNLDAARADYRAG 379 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 ++++D ER + E L+ A+ + +L IG+ ++ Sbjct: 380 AGPFINVIDAERQQLRTEEGLARARADYLRQLAELERWIGAPFD 423 >gi|157144928|ref|YP_001452247.1| multidrug resistance outer membrane protein MdtQ [Citrobacter koseri ATCC BAA-895] gi|157082133|gb|ABV11811.1| hypothetical protein CKO_00657 [Citrobacter koseri ATCC BAA-895] Length = 478 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 93/488 (19%), Positives = 192/488 (39%), Gaps = 65/488 (13%) Query: 7 IFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT------------LKWWE 54 SLF LLAGC P+ T+ S+ +D+ +WW+ Sbjct: 12 CLSLF-TLLAGCA----------PMHDTRQSLTRQTPAAQVDSPLPTAIKSGWPDSQWWK 60 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------------- 95 +++D L+ L+ ALQ + + A +RI A+ +V A Sbjct: 61 AYHDPQLDALIDNALQHSPDMQVAEQRIQLAEAQAKAVEAQDGPRLDFSADVERQKMSAE 120 Query: 96 --LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIA 152 + P + + TN T L + W +DL+G+ R + + + + + A+ Sbjct: 121 GLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVSARIGVVKAREAEQAQT 180 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + S + Y + + ++ QI + I + + G TS + V+ + + Sbjct: 181 RQLLASGVARLYWEWQTQAALKAVLTQIEHEQQNVITVDRQLYQNGITSSVEGVETDIDA 240 Query: 213 KSIESDIPTLEKSFRMNVHNISTLL-GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + ++ +S L A+ LH + Q +P + +L Sbjct: 241 GKTQQQLNDVAGKMKIIEARLSALTNAQSASLTLHTVALPVTESQ----LPAQLSY--EL 294 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 + RPD++ + S+ + AK+ YP ++L + AL + F Sbjct: 295 LARRPDLQAAHWYIESSLGSVDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTA 354 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIFD G++ +++ A++ + + + V++A+ +V A + + + + K QH Sbjct: 355 GLTLPIFDSGRLNASLDIAKAQSNLSVANYNKAVVDAVNDVARAASQV---ETVAEKNQH 411 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLY 443 ++ + + + Q R++ I + AK+ + I + Q + + L Sbjct: 412 QRQIEHDAQRV--VGLAQARFNAGIIAGSRVSQAKIPALREHCNGLILQGQWLDASIQLT 469 Query: 444 IAIGSGYN 451 A+G GY+ Sbjct: 470 SALGGGYH 477 >gi|204929156|ref|ZP_03220299.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321700|gb|EDZ06899.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 478 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 92/488 (18%), Positives = 198/488 (40%), Gaps = 63/488 (12%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A LFI LLAGC P+ T+ S+ ++D+ +WW Sbjct: 11 ASLPLFI-LLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------------ 95 ++++DT L+ L+ A+Q + + A +RI A+ +V A Sbjct: 60 KAYHDTQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIERQRMSA 119 Query: 96 ---LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + P + + TN T L + W +DL+G+ R + + + + + A+ + Sbjct: 120 EGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKAREAEQEQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + S + Y + + ++ QI + + ++ + G TS + V+ + + Sbjct: 180 TRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGVETDID 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + + ++ +S L T+ +Q + +P +G L Sbjct: 240 ASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPVVESQLPSQLGY--SL 294 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 + R D++ + S++ I AK+ YP ++L + AL + F + Sbjct: 295 LARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQYGITG 354 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + K QH Sbjct: 355 GLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLAQKNQH 411 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLY 443 ++ + + + Q R++ I + AK+ + + + + Q + + L Sbjct: 412 QQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDASIQLT 469 Query: 444 IAIGSGYN 451 A+G GY+ Sbjct: 470 SALGGGYH 477 >gi|160898497|ref|YP_001564079.1| outer membrane efflux protein [Delftia acidovorans SPH-1] gi|160364081|gb|ABX35694.1| outer membrane efflux protein [Delftia acidovorans SPH-1] Length = 485 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 68/312 (21%), Positives = 144/312 (46%), Gaps = 19/312 (6%) Query: 117 TGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 TG ++ W + FG R +E++ L +A A A + + Y A+ +ER+ Sbjct: 142 TGAVNLHWVVLDFGAREAALETARQLLRAANASGQAAVQQAFLRSVQLYYQAQSLQERLQ 201 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 A Q+LDL +N + ++ K+ GA + +++ + + + ++ S + +++ Sbjct: 202 AARQVLDLADENHQAANAKYQVGAAALSDMLQAKTALSRASLRVTRIQGSLEQVLGDMAL 261 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G A L + + QP+L + + + A + P +R + +L S A+ + Sbjct: 262 LMGQSADLPLRV--ETLSAPQPDLSFVVALDELLAIAQQTHPTLRAAQARL--SAAQSAV 317 Query: 295 AKSDLY--PSLSLNGSIALTHDNSFPGYNTHW-----SFGPKLYLPIFDKGKIKSNIRRA 347 +S Y P+++L SI + P + + S G L +P+FD + + IR A Sbjct: 318 QESRAYGRPNVALTASINRSRSMQPPALGSDFRQSDSSLGLLLNIPLFDGMEREYRIRDA 377 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS-MSLSMI--NY 404 ++ A E ++T+ ++V ++ + + LQ A E+ +S +L ++ Y Sbjct: 378 QARAAESTAAMEDTLQRISRDVWLNYQTLKTETE---SLQRASEIEDQSRQALEVVRGRY 434 Query: 405 RQGRYSLLDILD 416 R G ++ ++L+ Sbjct: 435 RAGVGNMTELLN 446 >gi|308274123|emb|CBX30722.1| hypothetical protein N47_E42340 [uncultured Desulfobacterium sp.] Length = 105 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 3/93 (3%) Query: 292 IGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +G+AK+ +PS+SL G++ L + W G L P+ D G+IKSN++ E Sbjct: 1 MGVAKAAYFPSISLTGTMGLESFELNKLLQSSAKMWGIGGNLLQPVIDFGRIKSNVKITE 60 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + +E I + TV A KEV +AL IN K Sbjct: 61 AQQKEAVIQYIMTVKTAFKEVYDALVKINTAGK 93 >gi|241767292|ref|ZP_04765022.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241362015|gb|EER58172.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 222 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 4/187 (2%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTH 323 IP++ +R RPDI+ + L + A G+A + LYP ++L+ GS ALT G Sbjct: 27 IPSEWVRQRPDIQGAQALLHAANADYGVAVARLYPQVNLSASLGSQALTTGALLGGGAAV 86 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS ++ P+F+ + + R A ++ +Q VL+A++ V +AL +++ D + + Sbjct: 87 WSLIGQITQPLFNP-ALPAEKRAALAALDAAAANYQGVVLDALRSVADALRALDNDAQAL 145 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 A + S+ Y G S L +L ++ ++ DL A+ + +S LY Sbjct: 146 AAQAGADAAAQGSLQSMQRQYALGSASYLQLLSAQQQAQQIRTDLLAAQARRLQSSAALY 205 Query: 444 IAIGSGY 450 A+G+G+ Sbjct: 206 QAVGAGW 212 >gi|62180758|ref|YP_217175.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128391|gb|AAX66094.1| putative Outer membrane efflux protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715233|gb|EFZ06804.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 478 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 92/493 (18%), Positives = 199/493 (40%), Gaps = 63/493 (12%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A+ + + + S + Y + + ++ QI + + ++ + G TS + V Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGV 234 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 + + + + + + ++ +S L T+ +Q + +P +G Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPAVESQLPSQLG 291 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 Y--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQ 349 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + Sbjct: 350 YGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLA 406 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKS 438 K QH ++ S + + Q R++ I + AK+ + + + + Q + Sbjct: 407 QKNQHQQQIEHDSQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDA 464 Query: 439 YVDLYIAIGSGYN 451 + L A+G GY+ Sbjct: 465 SIQLTSALGGGYH 477 >gi|83749671|ref|ZP_00946652.1| Hypothetical Protein RRSL_00359 [Ralstonia solanacearum UW551] gi|207743356|ref|YP_002259748.1| outer membrane efflux protein (partial sequence n terminus) [Ralstonia solanacearum IPO1609] gi|83723673|gb|EAP70870.1| Hypothetical Protein RRSL_00359 [Ralstonia solanacearum UW551] gi|206594753|emb|CAQ61680.1| putative outer membrane efflux protein (partial sequence n terminus) [Ralstonia solanacearum IPO1609] Length = 318 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 36/298 (12%) Query: 6 AIFSLFIVLLAGCT-VGPEY-----TKPHM----PLLPTQFSIGNSKNLINIDTLKWWES 55 A+ ++ + +LAGC +G + T P LP+Q S+N W + Sbjct: 28 ALSAIALAVLAGCADLGNAHSTQTLTSPEQLASAGTLPSQGGRWPSQN--------WVDQ 79 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF---- 108 FND L LV A+ + + A R+ A++ + R DL+PS RF Sbjct: 80 FNDPQLRALVDEAIHDSPNLQVAFARVRASRAMADAARGDLYPSVGLDAEMTRQRFSSYD 139 Query: 109 ----IP---NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 P N T S QL + +D +G+ R +ES+L++ + A+ A+L + + + Sbjct: 140 LFEGTPLGGNWVTESKIQLGVSYDLDFWGKNRAALESALSDDQAMEAESQAARLMLSTSV 199 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + +A + + ++ + LS + G +++ + A I + ++++ Sbjct: 200 ARTYAKLAALYAQRDVAERTIAQRRELVSLSGQRLRAGLDTQVETTQARANIAAAQTELE 259 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 +++ + + ++ LLG L + + + Q +P ++ I DLI RPD+ Sbjct: 260 QVDEQIALTRNQLAALLGKGPDRGL-AIARPTLLAQATPRLPDHLSI--DLIGRRPDL 314 >gi|302382929|ref|YP_003818752.1| type I secretion outer membrane protein, TolC family [Brevundimonas subvibrioides ATCC 15264] gi|302193557|gb|ADL01129.1| type I secretion outer membrane protein, TolC family [Brevundimonas subvibrioides ATCC 15264] Length = 497 Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 91/410 (22%), Positives = 174/410 (42%), Gaps = 31/410 (7%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP----SSYASISHRFIP 110 SF +T L + + +A + N T+ Q A E + RA L P S AS S Sbjct: 28 SFAET-LQEAIALAYRTNPTLQQQRANQRALDEVVPQARAGLRPEVSVSGSASYSRSQGG 86 Query: 111 NLKT--NSTGQLDSDWKIDLF-GQR--RHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T + TG D L+ G R R I+++ AN+ S + + V++ +I +Y+ Sbjct: 87 GLGTIESDTGGASIDLSQTLYSGGRIARGIDAATANVLSGRESLRAIEQQVLASVIQAYV 146 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D + E + I + + ++ ++ S+ +F G ++ + + EA + E+D+ + Sbjct: 147 DVQRDVEILRIREANVAVLRRQLDESNARFEVGEITRTDVSQSEARLAQSEADLAGAQAQ 206 Query: 226 FRMNVHNISTLLGY-PAT-EFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++ + ++G PA E + N+F+ + ++IG+ + P I + Sbjct: 207 LSVSRAAYAAVVGQAPANLEAPPVLPGIPNDFE----VALDIGLAEN-----PGITAAQY 257 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFP-GYNTHWSFGPKLYLPIFDKGKIK 341 L + A+ AKS P+ S + D F T + G + P+F G + Sbjct: 258 DLQAAEARHAQAKSAFLPTARATASYGGSGDLTDFDLADRTSFQAGASVSFPLFTGGLNR 317 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 S +A A I + + +++V +A + +T Q V ++ +++ Sbjct: 318 SQEVQALEQANAAQIEIERQRRSVLQDVSSAYAQVISTASQLTAGQSGV----RAATVAA 373 Query: 402 INYRQ----GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 RQ G + LD+L+ E E++L+ A+R + L A+G Sbjct: 374 EGVRQEQQVGLRTTLDVLNGELELRNAEINLASARRNQYVAQAQLLAAMG 423 >gi|189346366|ref|YP_001942895.1| outer membrane efflux protein [Chlorobium limicola DSM 245] gi|189340513|gb|ACD89916.1| outer membrane efflux protein [Chlorobium limicola DSM 245] Length = 462 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/272 (20%), Positives = 127/272 (46%), Gaps = 14/272 (5%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V++ + +Y DA ++R+ + Q ++ ++ + + F QG + + ++ ++++ Sbjct: 157 VVAGIKQAYFDALISRDRLKLIRQSIERWELAQKDTRAMFRQGVAADIDTLQAFLSVENL 216 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-ADLIRN 274 D+ E +++ + +G A + + P Y P +I + + + Sbjct: 217 RPDLIQAENMVGISMTKLKNAMGVAAESDVTLSGRL--EVSPASY-PADIASAYREALES 273 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI----ALTHDNSFPGYNTHW----SF 326 RPD+R E ++ K+ A+S+ +P LS G + A + D S +++W S Sbjct: 274 RPDLRQLELQVEAEDEKVFSARSERFPVLSAFGQLETQTAFSDDVSLA--DSNWPVSSSV 331 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G ++ +PIF +I + + +A + + + + N EVE +L++ E +K + Sbjct: 332 GLQVSMPIFTGFRISARVEQARIARLQVIARYADLKANIRTEVEVSLSAFREAQKRIEVQ 391 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + + ++S +S + +R+G S L++ D E Sbjct: 392 SKTISVAERSYRISQLRFREGIGSRLELSDAE 423 >gi|168259489|ref|ZP_02681462.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350925|gb|EDZ37556.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 478 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 96/505 (19%), Positives = 198/505 (39%), Gaps = 87/505 (17%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAK---LNVISKLIPSYIDARHFKERI-SIAHQILDLYKKNIELSHLKFT---QGA 199 A+ + + + +++L + K + I H+ ++ N EL T +G Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNN 254 + + K + ++ + + +E + S L PA E Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES---------- 284 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P +G L+ R D++ + S++ I AK+ YP ++L + AL Sbjct: 285 -----QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + L LPIFD G++ +N+ A++ + + + V++A+ +V Sbjct: 338 HLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVAR 397 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EV 426 A + + + + K QH ++ S + + Q R++ I + AK+ + Sbjct: 398 AASQV---ETLAQKNQHQQQIEHDSQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQC 452 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Q + + L A+G GY+ Sbjct: 453 NGLLLQGQWLDASIQLTSALGGGYH 477 >gi|56412914|ref|YP_149989.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361845|ref|YP_002141481.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127171|gb|AAV76677.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093321|emb|CAR58769.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 478 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 97/500 (19%), Positives = 194/500 (38%), Gaps = 87/500 (17%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A LFI LLAGC P+ T+ S+ ++D+ +WW Sbjct: 11 ASLPLFI-LLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------------ 95 ++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 60 KAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIERQRMSA 119 Query: 96 ---LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + P + + TN T L + W +DL+G+ R + + + + + A+ + Sbjct: 120 EGLMGPFAITDPAAGTTGPWYTNGTFDLTAGWDLDLWGKNRAEVTARIGAVKAREAEQEQ 179 Query: 152 AKLNVISKLIPSY----IDARHFKERISIAHQILDLYKKNIELSHLKFT---QGATSKLS 204 + + S + Y A + I H+ ++ N EL T +G + + Sbjct: 180 TRQLLASGVARLYWVWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGVETDID 239 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNL 259 K + ++ + + +E + S L PA E Sbjct: 240 ASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES--------------- 284 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNS 316 +P +G L+ R D++ + S++ I AK+ YP ++L + AL + Sbjct: 285 QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDL 342 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + Sbjct: 343 FRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV 402 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIA 431 + + K QH ++ S + + Q R++ I + AK+ + + + Sbjct: 403 ---ETLAQKNQHQQQIEHDSQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLL 457 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 + Q + + L A+G GY+ Sbjct: 458 QGQWLDASIQLTSALGGGYH 477 >gi|194336933|ref|YP_002018727.1| outer membrane efflux protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309410|gb|ACF44110.1| outer membrane efflux protein [Pelodictyon phaeoclathratiforme BU-1] Length = 483 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/279 (18%), Positives = 129/279 (46%), Gaps = 20/279 (7%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+ +V++ + SY DA K+++ + Q +D ++++ + + F QG + + +K Sbjct: 174 AEASVVADIKISYFDALISKDQLKLIEQSIDRWEQSRKDTRAMFRQGIAADIDTLKAFLS 233 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL---HYMQKQSNNFQPNLYIPINIGIP 268 ++++ D+ + + + + ++G PA + ++ S + ++ + Sbjct: 234 VENLRPDLLQAQNRVAITMTKLKNVMGVPADSSIVLSGKLELSSATYPADIAAAYREALD 293 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---------THDNSFPG 319 A RPD+R + ++ K+ +++ +P +S G + T D+ +P Sbjct: 294 A-----RPDLRQLDFQVKAEGEKVSAVRAERFPVISAFGKLETQTAFNDDVRTVDSVWPS 348 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 + S G + +PIF +I S + +A+ + + ++ N E+E + + E Sbjct: 349 SS---SVGLQFTMPIFTGYRISSQVEQAKIAQLQTRTRLEDLRANIRAEIEVRVLNFRES 405 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +K + + + ++S S+S++ +++G S L++ D E Sbjct: 406 QKRIEVQSQTIGVAERSYSISLLRFKEGIGSRLELTDAE 444 >gi|108763186|ref|YP_630039.1| outer membrane efflux protein [Myxococcus xanthus DK 1622] gi|108467066|gb|ABF92251.1| outer membrane efflux protein [Myxococcus xanthus DK 1622] Length = 499 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 97/450 (21%), Positives = 186/450 (41%), Gaps = 87/450 (19%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERI----------------------NAAKENI 89 WW +F D +L+ ++ NL + + E I N A + Sbjct: 79 WWTAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQGWWYPLQVGILNPAGLSH 138 Query: 90 LSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFG----QRRHIESSLANLDSA 145 + A+L P+ + N+ T G +++DLFG QRR A L+ A Sbjct: 139 VVANANLPPAPPTRAEY----NVATVGFG---VTYQVDLFGALGAQRR------AGLNFA 185 Query: 146 YAQVDIAKLNV------ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 Q + + V I+++ ++AR ++ + + +D KK + L +F Q Sbjct: 186 EQQRQLTEGRVQDLAVRITQVWFDILEARALRD---LTLRQIDYNKKLLRLIRARFEQHL 242 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQ 256 T +L +++ E + ++ES +P + + + LLG PA + + ++ + Sbjct: 243 TPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDL-- 300 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDN 315 P +G P DL N P++R E ++A+ +I + P++ L G++ AL Sbjct: 301 ---PPPPKLGTPGDLNVNTPEMRLAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGL 357 Query: 316 SFP-------GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 S P G N W+ +FD G+ + R Q + I +Q + AI Sbjct: 358 SEPALAESVVGVNLTWA--------LFD-GRRVTEYMRLPIQLQRREIQYQLALHTAIGR 408 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL-------DIERAT 421 V++A+ + + L+ V+L ++ + + + QG L +L +ERA+ Sbjct: 409 VQDAVVREENEATSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERAS 468 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + A+R L V++Y ++G ++ Sbjct: 469 LQ-------AQRLLLNHRVEVYRSLGGTWS 491 >gi|327482090|gb|AEA85400.1| cobalt-zinc-cadmium resistance protein CzcC, putative [Pseudomonas stutzeri DSM 4166] Length = 411 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/345 (21%), Positives = 147/345 (42%), Gaps = 49/345 (14%) Query: 126 IDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 I+L G+R I + AN A +D + + + +I ++ A +E + +A L L Sbjct: 93 IELGGKRGARIGVADANRSMVDADLDFRRQGLRADVIQAFFAALRAQEGMQLAEASLSLA 152 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +++ + G S + + + ++ +++ D+ + + ++ LLG A EF Sbjct: 153 ERAAKVADAQVDAGKVSPVEATRADMQLATVQLDLRRARQEWDNARQMLARLLGTDAPEF 212 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + +F+ +P + A +R D+R +++A S A++G+ +S YP +S Sbjct: 213 GSLL----GSFEHLPDVPSESALLAR-VRESADMRRALRQVALSEAELGLQRSQRYPDIS 267 Query: 305 LNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGK-----------IKSNIR-----RA 347 + SI +D N G + LP+FD+ + ++R R Sbjct: 268 V--SIGSQYDEIERERVNL---VGLSVPLPLFDRNQGNVLAAARRAEQARDLRNAAELRV 322 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q+ W+ T ++E+ N +I+ Q VE + SL G Sbjct: 323 RAEIQQALRDWR-TARADVEEIRN---------RILPAGQRTVEAATRGFSL-------G 365 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R++ LD+LD +RA +D Q ++ VD + I Y P Sbjct: 366 RFAFLDVLDAQRAL----IDARTRYLQSLQAVVDAWARIERLYGP 406 >gi|167744526|ref|ZP_02417300.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 181 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA+L+ RPDI ++ + A I ++ YP + +L G ALT + F Sbjct: 5 LPAELLGRRPDIVAARLRVEAAYAAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALG 64 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S GP L LPIFD+ ++K+ + ++A + +TV A+ EV LTS+ ++ Sbjct: 65 GSIGPALSLPIFDRSRLKAKLGGDVANADMALALYNQTVDAALGEVARQLTSLATLDTLL 124 Query: 384 TKLQHAVELHKKSMSLSMINYRQG 407 Q A+ ++ ++L+ +R+G Sbjct: 125 KAQQQALRAAQRMVALAQDRHRRG 148 >gi|50120469|ref|YP_049636.1| outer membrane secretion protein [Pectobacterium atrosepticum SCRI1043] gi|49610995|emb|CAG74440.1| outer membrane secretion protein [Pectobacterium atrosepticum SCRI1043] Length = 456 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 38/321 (11%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q+ A ++ +L +Y + +E+I++ Y++ +L+ F QG ++ +++ Sbjct: 138 QLRDASQQLLVRLFQAYTNVLFSREQITLVQAQQRAYREQYQLNQRLFQQGEGTRTDMLE 197 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 EA + E+ + + + +++ + TLLG P + + +++F P +P+ Sbjct: 198 TEARVNLTEAQLIEAQDNLDISLRELETLLGMPVG--VEQLAALTSHFTP---LPLQ--- 249 Query: 268 PADL-------IRNRPDIRYQEKKLADSVAKIGIA--KSDLYPSLSLNGSIALTHDNSFP 318 PA +R+ + + LA VAK GI ++ P ++L S T ++ Sbjct: 250 PAGYQHWHSLALRHNAQLLALNQSLA--VAKYGIERNRAGHLPQVTLVASTRNTQSDTEN 307 Query: 319 GYNTHW---SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 YN + S G ++ +PIF G + + R+A+ E+Y Q+T ++ T Sbjct: 308 SYNQKYDTRSIGIRVSVPIFAGGGVSAATRQAK----ERY---QQTAREKDEQTATIQTE 360 Query: 376 INEDKKIVTKLQ---HAVELHKKSMSLSMINYRQ-----GRYSLLDILDIERATAKVEVD 427 + +VT Q A EL +KS +L+++ Q G LD+L+ E+ D Sbjct: 361 LRRQFNLVTSSQAKIRAYELAEKS-ALALVTATQKSVQGGERVNLDVLNAEQQLYGARRD 419 Query: 428 LSIAKRQLAKSYVDLYIAIGS 448 L+ A+ +++ L G+ Sbjct: 420 LTEARYTWLTAWLQLRYYAGT 440 >gi|289524021|ref|ZP_06440875.1| type I secretion outer membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502677|gb|EFD23841.1| type I secretion outer membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 449 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/376 (18%), Positives = 157/376 (41%), Gaps = 39/376 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 SL + ++IALQ + ++ A +++ A + + + +P AS ++ + + S G Sbjct: 59 SLEQCIEIALQAHPDVMGAQKKVEAQESRVGQAMSQNYPELSASTNY----SRSSPSGGS 114 Query: 120 LDSDWKIDL--------FGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 S++ D+ FGQR R I N+ + + D K N+ + +Y Sbjct: 115 TRSNYSSDISLPQVITDFGQRERKIGIERENVTATGFEADNTKRNIAYGVSEAYYGVLAA 174 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 K +S+A + +++++ + + G + + K + ++ + ++ S + Sbjct: 175 KRNVSVAEDTVRQFEEHLRQAQGFYEAGTAPRFDVTKAQVDLSNARLELIKARSSLEIAW 234 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA-DLIR---------NRPDIRY 280 +S +G+ T P+ I ++ A D+ + NRPD++ Sbjct: 235 KTLSNAMGFADT--------------PSYDIADDMDFKAYDITKQEALERAFENRPDLKA 280 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 QE + + +A P+LS + FP + W++G L +P+FD + Sbjct: 281 QETGEVTAQKSLELAARGDSPTLSAYAAYNF-EGRDFP-LDEGWNYGLSLSVPVFDGHLV 338 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + + A ++ +E + + E+E S+ E + V + V ++++ L+ Sbjct: 339 EYRTKEAAANLEEVKLATSSLRNDISLEIEEGYLSLIEYGESVEVSRLMVRQAEENLELA 398 Query: 401 MINYRQGRYSLLDILD 416 + Y+ G S +++ D Sbjct: 399 LGRYQAGVGSPIEVTD 414 >gi|50084658|ref|YP_046168.1| putative outer membrane efflux protein, type I secretion protein [Acinetobacter sp. ADP1] gi|49530634|emb|CAG68346.1| putative outer membrane efflux protein, type I secretion protein [Acinetobacter sp. ADP1] Length = 470 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 87/389 (22%), Positives = 171/389 (43%), Gaps = 48/389 (12%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--------HR 107 N+ L V+IA+++N +I +A + A NI R+ FP IS + Sbjct: 59 LNEIGLINAVQIAVKRNPSIGEAISTMAAQNANIDVARSQYFPQITGGISTGGNLSSSEQ 118 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + T S Q+ D FG+ + ++ S A L A V ++ + +++ + ++ Sbjct: 119 RGRQMYTISATQMVYD-----FGKVKSNVSSQEARLQLQQANVLVSIDTIATQVATTVVN 173 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +K+ + IA Q + ++ ++ L+ G +S+ V+ + ++S ++ + Sbjct: 174 IERYKKLVEIAEQQVKGLQRIQNIAELRAQAGISSQADPVQARSYVESAQAALIAQRSLL 233 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 R N ++ LLG+ A + + IP ++ +DL + PD L Sbjct: 234 RQNQQRLTVLLGFDA-------------YDKSWSIPEDLVQVSDLYK-EPDFNIIPNMLV 279 Query: 287 DSVAKIGIAKSD-------LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP----IF 335 + A++ +AK+D YP+LSL GS++ + N F + L ++ Sbjct: 280 -AQAQVEVAKADKKQTDLSRYPTLSLVGSVSQAANGVNNNNNKEDGFYSSVSLEANTKLY 338 Query: 336 DKGKIKSNIRR---AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 G + + IR AE +A+ + + V++A+K + E+K+ K+ A E+ Sbjct: 339 QGGAVTAQIRSAGFAEEAAKAKVNSVYLDVMDAVKTTRENI----ENKQEQIKVLRAREI 394 Query: 393 HK-KSMSLSMINYRQGRYSLLDILDIERA 420 K+ L Y+ G S+LD+L+ E+A Sbjct: 395 TAVKTRELYQEQYKLGTRSVLDLLNAEQA 423 >gi|167722965|ref|ZP_02406201.1| outer membrane efflux protein [Burkholderia pseudomallei DM98] Length = 331 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNT 322 G+P+ L+ RPDI E +L + A IG A++ +P ++L G++ + + F G Sbjct: 4 GLPSTLLERRPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVASASLAGLFSG-GV 62 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W F P+L LPIF+ G ++N+ A ++ T+ +A +EV + L + ++ Sbjct: 63 AWLFVPQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYERE 122 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 V + + ++ L+ + +R G + D +R + L K S V L Sbjct: 123 VKAQEAMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTL 182 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 183 YKALGGGW 190 >gi|83858697|ref|ZP_00952219.1| outer membrane protein TolC, putative [Oceanicaulis alexandrii HTCC2633] gi|83853520|gb|EAP91372.1| outer membrane protein TolC, putative [Oceanicaulis alexandrii HTCC2633] Length = 449 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/405 (18%), Positives = 168/405 (41%), Gaps = 19/405 (4%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRF-- 108 W SLN+ + A + N T+ + ++E RA L PS + S+ Sbjct: 20 WGLAQAQSLNETLAAAYESNPTLGAQRASLRQSEEGYFQARAGLLPSLSATGSVGETVDT 79 Query: 109 ---IPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSY 164 P ++S G L + I G+ R I++SLA +++A Q+ + +V+ + ++ Sbjct: 80 WGGAPENDSSSYG-LTLNQSIYRGGRTRGSIDASLARIEAARQQLRSTEQSVLLDAVSAH 138 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 ++ ++ ++I +++ + + + +F G ++ + + EA + + + + Sbjct: 139 MNVVRDQQVVAIRSNNVEVLAEQLRAARDRFEVGEITRTDVAQAEARLSGARAQLSAAQA 198 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR-PDIRYQEK 283 + + + + G E +N P+ +P A++ NR PD+ + Sbjct: 199 ALAASRAGYARVTGVDPVE--------PDNAGPSEQVPAEFADAAEVAINRNPDLLAAQY 250 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKS 342 + + +A+ P + L S++ ++ F G S + +PIF G +S Sbjct: 251 AEQAAEYGVRVARGAQLPEIGLRASVSEGRESDFSGQGRGTASITANVTMPIFTGGLNRS 310 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+R A ++A + ++ I+ NA + ++ + AV ++ + Sbjct: 311 NVREARAAADQARLSGLTVRRQVIEGATNAWNNYLAALAVIESSREAVRANEIAFEGVEQ 370 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 G + LD+L+ E+ ++L A+R L + L A+G Sbjct: 371 EALVGLRTTLDVLNAEQELLNSRLELVRAERDLTVASYALLQAMG 415 >gi|218782688|ref|YP_002434006.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] gi|218764072|gb|ACL06538.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] Length = 448 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 81/382 (21%), Positives = 160/382 (41%), Gaps = 38/382 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST-- 117 +L K V +AL+ N + A + +A+ + + D PS YAS S + +T+ST Sbjct: 34 TLKKAVALALEHNQDLRMAQNSVKSAEITVKQDKDDFLPSLYASSSWSASAD-RTDSTED 92 Query: 118 ---GQLDSDWKIDL-----FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 L++ +L +G + +E S +L + + +VI + ++ A Sbjct: 93 DTFQSLNAAISTNLNLFNGYGDQASLEKSRYSLSAEENTRNRTMQSVIYNTMEAFFQAYT 152 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +E+I +A L+ + ++ + G+ L + +A+ S + D+ T ++ + +N Sbjct: 153 AREKIKVAENNLEDNARQLDEIQAFYDAGSKPVTDLYQQKAQTSSAQLDLLTAQRDYSVN 212 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQ---PNL---YIPINIGIPADL---IRNRPDIRY 280 + +G PA S NF+ P+L +P + L + RPDI+ Sbjct: 213 KIQLMEAIGMPA----------SANFEIAPPSLSRDLLPTGVTTEEALNQALAQRPDIQS 262 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSFGPKLYL 332 Q + ++ + A I K+ PSL L G + L + F + G L + Sbjct: 263 QSETISAAQASIRENKAGFLPSLDLTGEVGTNYSSGSDLGFQDQFWNQSMDARVGLSLSI 322 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD+ ++N+ +A S + ++ E+ A+ +K V + +E Sbjct: 323 PIFDRNITRNNVAKARISLNNAELALEKIKRQVEVEIGQAVADYQTAEKKVQVTRDQLEY 382 Query: 393 HKKSMSLSMINYRQGRYSLLDI 414 +++ S Y G +L ++ Sbjct: 383 ATQALDSSSQRYTVGASTLTEL 404 >gi|312967432|ref|ZP_07781647.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 2362-75] gi|312287629|gb|EFR15534.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 2362-75] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LGYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q S Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDSS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|46205486|ref|ZP_00048488.2| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 224 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 95/194 (48%), Gaps = 12/194 (6%) Query: 117 TGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 T Q+ + D+FG RR IE+ ++ Q++ A L++ + ++ + I + +I Sbjct: 38 TPQVIVAFNPDVFGGNRRQIEALEGEAENQRFQLEAAYLSLTANVVTAAIQEAALRAQIE 97 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +++ + +EL + + G + +V+ +A + + +P LEK + ++ Sbjct: 98 ATKRVIQAQTEVLELYNKQLKLGQIAGADVVQQQAALSLSQQQLPPLEKQLAQQRNLLTA 157 Query: 236 LLG-YPATEFLHYMQKQSNNFQPN-LYIP--INIGIPADLIRNRPDIRYQEKKLADSVAK 291 L G P+ E S F N L++P + + +P+ L++ RPD++ E ++ + A Sbjct: 158 LTGRLPSDEV-------SETFTLNTLHLPTRLPVSLPSHLVQQRPDVKAAESQVRTASAN 210 Query: 292 IGIAKSDLYPSLSL 305 +G+A ++ P S+ Sbjct: 211 VGVAVANRLPQFSM 224 >gi|167819130|ref|ZP_02450810.1| outer membrane efflux protein [Burkholderia pseudomallei 91] Length = 337 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NT 322 G+P+ L+ RPDI E +L + A IG A++ +P ++L G++ + S G Sbjct: 10 GLPSTLLERRPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGV 68 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W F P+L LPIF+ G ++N+ A ++ T+ +A +EV + L + ++ Sbjct: 69 AWLFVPQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYERE 128 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 V + + ++ L+ + +R G + D +R + L K S V L Sbjct: 129 VKAQEAMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTL 188 Query: 443 YIAIGSGY 450 Y A+G G+ Sbjct: 189 YKALGGGW 196 >gi|168229524|ref|ZP_02654582.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236339|ref|ZP_02661397.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168466150|ref|ZP_02700020.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443407|ref|YP_002041443.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469848|ref|ZP_03075832.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738021|ref|YP_002115261.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248737|ref|YP_002147143.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238912615|ref|ZP_04656452.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194402070|gb|ACF62292.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194456212|gb|EDX45051.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713523|gb|ACF92744.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631458|gb|EDX50018.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212440|gb|ACH49837.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290562|gb|EDY29917.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205335671|gb|EDZ22435.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|322615200|gb|EFY12122.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617791|gb|EFY14687.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624615|gb|EFY21446.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626934|gb|EFY23730.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634120|gb|EFY30856.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635689|gb|EFY32399.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640176|gb|EFY36840.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646401|gb|EFY42913.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322656489|gb|EFY52778.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661465|gb|EFY57689.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665647|gb|EFY61831.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667171|gb|EFY63338.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671177|gb|EFY67305.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675183|gb|EFY71260.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680791|gb|EFY76826.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686966|gb|EFY82943.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192730|gb|EFZ77957.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198838|gb|EFZ83937.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205152|gb|EFZ90130.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208195|gb|EFZ93139.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213522|gb|EFZ98313.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215780|gb|EGA00523.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223855|gb|EGA08158.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231226|gb|EGA15341.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233660|gb|EGA17752.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237730|gb|EGA21790.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245713|gb|EGA29707.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248922|gb|EGA32846.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253006|gb|EGA36839.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258682|gb|EGA42344.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259514|gb|EGA43149.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268297|gb|EGA51772.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271914|gb|EGA55330.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/493 (18%), Positives = 199/493 (40%), Gaps = 63/493 (12%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A+ + + + S + Y + + ++ QI + + ++ + G TS + V Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 + + + + + + ++ +S L T+ +Q + +P +G Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPAVESQLPSQLG 291 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 Y--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQ 349 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + Sbjct: 350 YGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLA 406 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKS 438 K QH ++ + + + Q R++ I + AK+ + + + + Q + Sbjct: 407 QKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDA 464 Query: 439 YVDLYIAIGSGYN 451 + L A+G GY+ Sbjct: 465 SIQLTSALGGGYH 477 >gi|197261885|ref|ZP_03161959.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240140|gb|EDY22760.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 89/491 (18%), Positives = 199/491 (40%), Gaps = 59/491 (12%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A+ + + + S + Y + + ++ QI + + ++ + G TS + V Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 + + + + + + ++ +S L T+ +Q + +P +G Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPAVESQLPSQLG 291 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 Y--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQ 349 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + Sbjct: 350 YGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLA 406 Query: 384 TKLQHAVELH---KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 K QH ++ K+ + L+ + G + + + + + + + + + Q + + Sbjct: 407 QKNQHQQQIEHDAKRVVGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDASI 466 Query: 441 DLYIAIGSGYN 451 L A+G GY+ Sbjct: 467 QLTSALGGGYH 477 >gi|110642347|ref|YP_670077.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli 536] gi|110343939|gb|ABG70176.1| hypothetical outer-membrane lipoprotein YohG precursor [Escherichia coli 536] Length = 505 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 188/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 38 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 87 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSAVEGVETDIN 266 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 267 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDAS 492 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 493 IQLTGALGGGY 503 >gi|16761114|ref|NP_456731.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765502|ref|NP_461117.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141190|ref|NP_804532.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161613138|ref|YP_001587103.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551126|ref|ZP_02344881.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991097|ref|ZP_02572196.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|198244729|ref|YP_002216256.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353309|ref|YP_002227110.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857607|ref|YP_002244258.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161138|ref|ZP_03346848.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428226|ref|ZP_03360976.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213648443|ref|ZP_03378496.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852324|ref|ZP_03381856.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824272|ref|ZP_06543867.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25320873|pir||AB0779 probable lipoprotein STY2402 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420708|gb|AAL21076.1| putative outer membrane efflux protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503412|emb|CAD02552.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136816|gb|AAO68381.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161362502|gb|ABX66270.1| hypothetical protein SPAB_00846 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197939245|gb|ACH76578.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273090|emb|CAR38044.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324045|gb|EDZ11884.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330555|gb|EDZ17319.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|206709410|emb|CAR33751.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267994237|gb|ACY89122.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158734|emb|CBW18246.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913163|dbj|BAJ37137.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224825|gb|EFX49888.1| RND efflux system, outer membrane lipoprotein, NodT family [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130499|gb|ADX17929.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326624006|gb|EGE30351.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628398|gb|EGE34741.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989106|gb|AEF08089.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/493 (18%), Positives = 199/493 (40%), Gaps = 63/493 (12%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A+ + + + S + Y + + ++ QI + + ++ + G TS + V Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGV 234 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 + + + + + + ++ +S L T+ +Q + +P +G Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPAVESQLPSQLG 291 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 Y--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQ 349 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + Sbjct: 350 YGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLA 406 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKS 438 K QH ++ + + + Q R++ I + AK+ + + + + Q + Sbjct: 407 QKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDA 464 Query: 439 YVDLYIAIGSGYN 451 + L A+G GY+ Sbjct: 465 SIQLTSALGGGYH 477 >gi|325525427|gb|EGD03253.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 187 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 3/154 (1%) Query: 300 YPSLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 +P +SL G+ T F WSF P++ +PIF+ G+ +N+ A + + Sbjct: 1 FPRISLTGAFGTGSPTLGGLFKAGTAVWSFAPQITMPIFEGGQNIANLNLANVQKRIEIA 60 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +++ + A +EV + L + + + L+ ++ LS + Y+ G S L +L Sbjct: 61 NYEKAIQTAFREVADGLAARGTYDQQIAALERNEHAQQRRFDLSDLRYKNGVDSYLSVLT 120 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + L A+ + VDLY A+G G+ Sbjct: 121 AQTDLYTAQQSLINARLARWTNLVDLYRALGGGW 154 >gi|168242256|ref|ZP_02667188.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451083|ref|YP_002046225.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409387|gb|ACF69606.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338393|gb|EDZ25157.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 478 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 91/493 (18%), Positives = 199/493 (40%), Gaps = 63/493 (12%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A+ + + + S + Y + + ++ QI + + ++ + G TS + V Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 + + + + + + ++ +S L T+ +Q + +P +G Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTN---TQSAALKLRQVSLPAVESRLPSQLG 291 Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTH 323 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 Y--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQ 349 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + Sbjct: 350 YGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLA 406 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKS 438 K QH ++ + + + Q R++ I + AK+ + + + + Q + Sbjct: 407 QKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDA 464 Query: 439 YVDLYIAIGSGYN 451 + L A+G GY+ Sbjct: 465 SIQLTSALGGGYH 477 >gi|227114859|ref|ZP_03828515.1| outer membrane secretion protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 451 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 26/315 (8%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q+ A ++ +L +Y + +E+I++ Y++ +L+ F QG ++ +++ Sbjct: 133 QLRDASQQLLVRLFQAYTNVLFSREQIALVQAQQRAYREQYQLNQRLFQQGEGTRTDMLE 192 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 EA + E+ + + + +++ + TLLG P + + + F P P Sbjct: 193 TEARVNLTEAQLIEAQDNLDISLRELETLLGMPVG--VDQLAALTPRFTPQPLQPAGYQH 250 Query: 268 PADL-IRNRPDIRYQEKKLADSVAKIGIA--KSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 L +R+ + + LA VAK GI ++ P ++L S T ++ YN + Sbjct: 251 WQSLALRHNAQLLALNQSLA--VAKYGIERNRAGHLPQVTLVASTRNTQSDTENSYNQKY 308 Query: 325 ---SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 S G ++ +PIF G + + R+A+ E+Y Q+T ++ T + Sbjct: 309 DTRSIGIRVSVPIFAGGGVSAATRQAK----ERY---QQTAREKDEQTATIQTELRRQFN 361 Query: 382 IVTKLQ---HAVELHKKSMSLSMINYRQ-----GRYSLLDILDIERATAKVEVDLSIAKR 433 +VT Q A EL +KS +L+++ Q G LD+L+ E+ DL+ A+ Sbjct: 362 LVTSSQAKIRAYELTEKS-ALALVTATQKSVQGGERVNLDVLNAEQQLYGARRDLTEARY 420 Query: 434 QLAKSYVDLYIAIGS 448 +++ L G+ Sbjct: 421 TWLTAWLQLRYYAGT 435 >gi|254470091|ref|ZP_05083495.1| outer membrane protein [Pseudovibrio sp. JE062] gi|211960402|gb|EEA95598.1| outer membrane protein [Pseudovibrio sp. JE062] Length = 460 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 116/487 (23%), Positives = 211/487 (43%), Gaps = 80/487 (16%) Query: 7 IFSLFIVLLAGCT--VGPEYTK--PHMPL--LPTQFSIGNSKNLINIDTLKWWESFNDTS 60 I + VLLA CT + PE T M + PT++S S + + +L +D Sbjct: 9 ILAASGVLLASCTTSLSPERTTFTEEMAVGQTPTEWSQKGSSHGQALSSLL--ALSSDKK 66 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNST-- 117 LNK V L N+++ Q+ + A+ L+P+ ++ S + R S+ Sbjct: 67 LNKHVDAVLANNISLRQSVLDLQKAELERDKASGTLWPTLTFNSQADRQRVKSTQGSSYQ 126 Query: 118 ----GQLDSDWKIDLFGQ--------RRHIESSLANLDSAYAQ---------VDIAKLNV 156 G L W+ DL+G+ R + +S +L +A A V + L Sbjct: 127 NSVGGDLTVQWEADLWGKLSDRAYASDRTLRASAHDLMAARASLAAQAMRNWVQLTALEK 186 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNI-ELSHLKFTQGATSKLSLVKLEAEIKSI 215 ++ L S I + E+I I D + + I ELS L+ + AT+ ++++ Sbjct: 187 LANLDRSRISSLRNTEQI-----ISDQFTRGIGELSDLEAARSATANA-----QSDLADR 236 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 I L++ ++ + P T F ++ + PN+ +P +PA + R Sbjct: 237 TVQIDQLKRQMQVAASQM------PNTHF------KTGSLLPNVKLPKG-AMPATTLGRR 283 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI----ALTHD--NSFPGYNTHWSFGPK 329 PD+ ++ A + + + DL P+ S+N + A D N P W Sbjct: 284 PDLLAAYERAAAADLQHKASYKDLLPTFSVNFTASDQSASLADLLNGGPA----WRLLGS 339 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKIVTK- 385 L PI D G + ++A+ A ++++++T+L A+ EVEN L T + + ++I+T+ Sbjct: 340 LSAPILDGGNRRLTAKQADLDAARLWLSYRQTLLTAVMEVENGLQNETILRKREQILTRA 399 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLSIAKRQLAKSYVDL 442 L H+ +++ YR G ++ +L ER A + V++ ++ Q + VDL Sbjct: 400 LNHSQSNYEQYER----RYRDGLTDIVTLLSAERDAFAARQAVVNIRSSRMQ---NRVDL 452 Query: 443 YIAIGSG 449 +A G G Sbjct: 453 AVAFGIG 459 >gi|331647790|ref|ZP_08348882.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli M605] gi|331043514|gb|EGI15652.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli M605] Length = 505 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 98/490 (20%), Positives = 191/490 (38%), Gaps = 69/490 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP---HMP------LLPTQFSIGNSKNLINIDTLKWWESF 56 A FSL + +LAGC E + P +LPT G + + +WW + Sbjct: 38 ACFSLLL-MLAGCATMHETHQALSQQTPAAQVDTVLPTALKNGWTDS-------QWWLEY 89 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASI 104 +D L L+ ALQ + A +RI A+ +V P S + Sbjct: 90 HDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVTTQDGPQLDFSADMERQKMSAEGL 149 Query: 105 SHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F N TN T L + W +D++G+ R + + L + + A+ + + Sbjct: 150 MGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQ 209 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + Y + + ++ QI I + G TS ++ Sbjct: 210 LLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEG 260 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL- 271 +E+DI R +++++ + L Q QS +P + +P +L Sbjct: 261 VETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTQSLKLKPVALPKVASQLPDELG 318 Query: 272 ---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWS 325 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 319 YSLLARRADLQAAHWYIESSLSTIDAAKAAFYPDINLMTFLQQDALHLSDLFRHSAQQMG 378 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Sbjct: 379 VTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAEK 435 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYV 440 QH ++ + +L ++ Q R++ I + A++ + + + Q + + Sbjct: 436 NQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASI 493 Query: 441 DLYIAIGSGY 450 L A+G GY Sbjct: 494 QLTGALGGGY 503 >gi|226940300|ref|YP_002795374.1| outer membrane efflux protein [Laribacter hongkongensis HLHK9] gi|226715227|gb|ACO74365.1| Probable outer membrane efflux protein [Laribacter hongkongensis HLHK9] Length = 467 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 78/369 (21%), Positives = 156/369 (42%), Gaps = 28/369 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------ 105 WW + + L++L+ A +Q+ ++ +A RI AA ++ A P A+ Sbjct: 55 WWRALHIAELDQLIDDARRQHPSLTEALARIRAATASVRLTAAGAGPQIDANAGTERARE 114 Query: 106 --HRFIPNLKTNSTGQL-----DSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 + +P S L D W++DL+G+ R S+ A +A + ++ + Sbjct: 115 SEYGLLPPPIGGSWYSLHALSVDMGWRLDLWGRIRSQTASAEARRLAARLEYQASEQWLA 174 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + Y++ + + A Q LDL ++ + G + L A+ ++ES Sbjct: 175 SAITAQYLELAGSRLQADAARQELDLARQQARQAASLLRSGLVTADVPDSLHADQLALES 234 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 I L+ + H ++ L P +Q ++ + + A RPD Sbjct: 235 RITQLQAREQTAAHALAALSAQPQDRIDRLQARQLPDWSFDSATLTTRALAA-----RPD 289 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG---PKLYLPI 334 ++ + S + AK+ YP L+L I L N+ ++ S P + LP+ Sbjct: 290 VQAALAYVRASEHSVDAAKAAFYPDLTLGAFIGLQAQNTADLFSRAGSIAGIMPGISLPL 349 Query: 335 FDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQ--HA-- 389 F G + + + A+S+ ++ I + +T+L AI+E + ++ +++ + Q HA Sbjct: 350 FHAGALNAELD-AQSAGRDTAIARYNQTLLTAIREAADGVSQTQAARQLWQQAQSRHATL 408 Query: 390 VELHKKSMS 398 +L ++S S Sbjct: 409 AQLARRSQS 417 >gi|330911971|gb|EGH40481.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli AA86] Length = 478 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 98/490 (20%), Positives = 191/490 (38%), Gaps = 69/490 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP---HMP------LLPTQFSIGNSKNLINIDTLKWWESF 56 A FSL + +LAGC E + P +LPT G + + +WW + Sbjct: 11 ACFSLLL-MLAGCATMHETHQALSQQTPAAQVDTVLPTALKNGWTDS-------QWWLEY 62 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASI 104 +D L L+ ALQ + A +RI A+ +V P S + Sbjct: 63 HDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVTTQDGPQLDFSADMERQKMSAEGL 122 Query: 105 SHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F N TN T L + W +D++G+ R + + L + + A+ + + Sbjct: 123 MGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQ 182 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + Y + + ++ QI I + G TS ++ Sbjct: 183 LLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEG 233 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL- 271 +E+DI R +++++ + L Q QS +P + +P +L Sbjct: 234 VETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTQSLKLKPVALPKVASQLPDELG 291 Query: 272 ---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWS 325 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 292 YSLLARRADLQAAHWYIESSLSTIDAAKAAFYPDINLMTFLQQDALHLSDLFRHSAQQMG 351 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Sbjct: 352 VTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAEK 408 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYV 440 QH ++ + +L ++ Q R++ I + A++ + + + Q + + Sbjct: 409 NQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASI 466 Query: 441 DLYIAIGSGY 450 L A+G GY Sbjct: 467 QLTGALGGGY 476 >gi|241768002|ref|ZP_04765525.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241360765|gb|EER57672.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 196 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%) Query: 295 AKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 A+S+ YP++++ I AL D F G + P L LP+FD G++++ + ++ Sbjct: 19 ARSEFYPNINIGAFIGLNALGLDKLFNGSSRQMGVTPALRLPLFDGGRLRAQLGGRQAEL 78 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + VL+A+KE +A+ S+ + T A +K+ + YR G + Sbjct: 79 DAAIAQYNGAVLDAVKEAGDAVASVQSLTRQQTLQDDAAASAEKAYRFAQERYRAGLGNY 138 Query: 412 LDILDIER---ATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L +L E A ++ VDL RQL V L A+G G+ Sbjct: 139 LVVLSTESQVLAQRRLAVDLR--ARQLDTRLV-LMKALGGGW 177 >gi|146283740|ref|YP_001173893.1| cobalt-zinc-cadmium resistance protein CzcC, putative [Pseudomonas stutzeri A1501] gi|145571945|gb|ABP81051.1| cobalt-zinc-cadmium resistance protein CzcC, putative [Pseudomonas stutzeri A1501] Length = 413 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 49/345 (14%) Query: 126 IDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 I+L G+R I + AN A +D+ + + + +I ++ A +E + +A L L Sbjct: 95 IELGGKRGARIGVADANRSMVDADLDLRRQGLRADVIQAFFAALRAQEGMRLAEASLSLA 154 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ +++ + G S + + + ++ +++ D+ + + ++ LLG A EF Sbjct: 155 ERAAKVADAQVDAGKVSPVEATRADMQLATVQLDLRRARQEWDNARQMLARLLGTDAPEF 214 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + +F+ +P + A +R D+R +++A S A++G+ +S YP +S Sbjct: 215 GSLL----GSFEHLPDVPSESALLA-RVRESADMRRALRQVALSEAELGLQRSQRYPDIS 269 Query: 305 LNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGK-----------IKSNIR-----RA 347 + SI +D N G + LP+FD+ + ++R R Sbjct: 270 V--SIGSQYDEIERERVNL---VGLSVPLPLFDRNQGNVLAAARRAEQARDLRNAAELRV 324 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + Q+ W+ T ++E+ N +I+ Q VE + L G Sbjct: 325 RAEIQQALRDWR-TARADVEEIRN---------RILPAGQRTVEAATRGFGL-------G 367 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 R++ LD+LD +RA +D Q ++ VD + I Y P Sbjct: 368 RFAFLDVLDAQRAL----IDARTRYLQSLQAVVDAWARIERLYGP 408 >gi|110679042|ref|YP_682049.1| TolC family type I secretion outer membrane protein [Roseobacter denitrificans OCh 114] gi|109455158|gb|ABG31363.1| type I secretion outer membrane protein, TolC family, putative [Roseobacter denitrificans OCh 114] Length = 466 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/271 (19%), Positives = 113/271 (41%), Gaps = 21/271 (7%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V+ + + +Y+ ++ + + L L + + + +F G ++ + + EA + Sbjct: 135 VLLRAVVAYLSVYANRDAVQLRQNNLRLLSEELRAAQDRFEVGEVTRTDVAQAEASLAQA 194 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL---- 271 S + T + + + E+ + + +Q P +P I +D+ Sbjct: 195 RSGLATAQGDLQQAIE-----------EYQNVIGRQPGQIVPPPQLP---QIESDVEAAR 240 Query: 272 ---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP 328 +R PD+R + ++A S + A+S L P++S GS+ +T D Y + G Sbjct: 241 ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGI 300 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L PI+ G + S+IRRA +S + E ++V NA ++ + + + Sbjct: 301 ELSQPIYRGGALSSSIRRAIASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEE 360 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + + + G + LD+LD E+ Sbjct: 361 RIRAARIAFRGVREEATLGARTTLDVLDAEQ 391 >gi|152971115|ref|YP_001336224.1| multidrug resistance outer membrane protein MdtQ [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|329999107|ref|ZP_08303313.1| putative multidrug resistance outer membrane protein MdtP [Klebsiella sp. MS 92-3] gi|150955964|gb|ABR77994.1| putative channel/filament proteins [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328538468|gb|EGF64585.1| putative multidrug resistance outer membrane protein MdtP [Klebsiella sp. MS 92-3] Length = 479 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 92/445 (20%), Positives = 181/445 (40%), Gaps = 72/445 (16%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D LN L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDPQLNNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADIERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYA-QVD 150 +A+ + TN T L + W +DL+G+ R +++ + L + A Q Sbjct: 118 SAEGLMGPFATDTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVKARIGELKAQVAEQAQ 177 Query: 151 IAKL--NVISKLIPSYIDARHFK--------ERISIAHQILDLYKKNIELSHLKFTQGAT 200 +L +++L + K E+ +I LY++ I S +GA Sbjct: 178 TRELLSGSVARLYWQWQTEAAIKAVLQQVKNEQNNIVTVDKALYQRGITNS----AEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + +++ K + ++ + + +E M + N Q QS N +P Sbjct: 234 NDINVSKTDQQLADVTGTMKEIEARL-MALTN---------------SQSQSLNLKPASL 277 Query: 261 IPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTH 313 ++ +P +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PTVSAQLPDTLGYELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDALHL 337 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI------- 366 + F L LPIFD G++ +N+ A + + + V++A+ Sbjct: 338 SDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAKTA 397 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +VE + + +++ Q V+L + M+ ++ + + L L ER TA Sbjct: 398 SQVETLMAKSQQQQQVEKDAQRVVDLAQARMAAGILPGSRVSMAKLPALQ-ERITA---- 452 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 L + Q + + L A+G GY+ Sbjct: 453 -LRL-HGQWIDASIQLTSALGGGYH 475 >gi|254445740|ref|ZP_05059216.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198260048|gb|EDY84356.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 442 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/231 (21%), Positives = 121/231 (52%), Gaps = 15/231 (6%) Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI 263 +L++L+ EI + + +L++ +S LL P + L + + + +P L P Sbjct: 185 ALLRLKVEIGKVNDRLQSLQQKRVTQSAQLSELLALPESTLLPWPEWR----KPGLVSPR 240 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 + + N P+++ E+K+A + A+I +AK + P S+ + D P ++ Sbjct: 241 ATSLLESIESNNPELQMLERKIASAEARIELAKLESRPDFSVGLNYVQIGDLDTPAMSSD 300 Query: 324 -----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ-ETVLNAIK-EVENALTSI 376 W + +P++ K K++ +AE+++ +Q I + + LNA+K ++ ++L+S+ Sbjct: 301 SGKDAWGVTFGVNIPLWSK---KNHAAKAEAASSQQAIQSEYQNRLNALKADLASSLSSL 357 Query: 377 NE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 + ++++ + + L ++++ S +Y+ GR +L+++D ER+ ++++ Sbjct: 358 TDANRRLELYGEELLGLAEQAVENSRTSYQGGRTGILEVIDSERSLLELQL 408 >gi|118580781|ref|YP_902031.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] gi|118503491|gb|ABK99973.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] Length = 495 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 79/383 (20%), Positives = 154/383 (40%), Gaps = 26/383 (6%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI----SHRFIPNLKTN 115 SL +AL N I A I + RA P+ +I +H P Sbjct: 85 SLIDAADLALCNNPQIKAAWAAIKLQSAEVGQARAAYLPTLSGTINFMRTHYSYPGSGVA 144 Query: 116 STGQLDS------DWKI-DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 ST + + W++ D G+ + ES+ L +A AQ D A ++ +I SY DA Sbjct: 145 STTEDGTTINATLGWRLFDFGGRAANRESANKMLVAALAQHDAALQKKLADVIQSYFDAV 204 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + Q + +E + + +G S+ ++ + D + +++ Sbjct: 205 TAQASLHAKEQNESIAVNTLETAQRREDRGVVSRSDRLQAATALARATLDRNRAQGAYQK 264 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNF---QPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 V + +LG P + + + +F + + + + + A + P + + Sbjct: 265 AVAVLVYVLGIPTRTAIALPDELNGDFAESEESKTLDDWLKLAA---KTHPSLLAGRAQW 321 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH------WSFGPKLYLPIFDKGK 339 SV KI +S+ P++ + + + N +PG + G L P FD Sbjct: 322 ESSVRKIAATRSEGLPTVDFSANY---YQNGYPGQGLSRTDSRITTIGLSLTFPFFDGFS 378 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 IR AE+ A++Q+ QET N + EV A + + + +++ + S+++ Sbjct: 379 RTYKIRNAEAQAEQQHAEVQETEQNTLMEVVKAHADAGSSLQNLQASKKLLDIAEASLAV 438 Query: 400 SMINYRQGRYSLLDILDIERATA 422 S Y +G +L++L+ + A A Sbjct: 439 SQRKYEKGAADILEVLNTQAALA 461 >gi|152981378|ref|YP_001352812.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] gi|151281455|gb|ABR89865.1| outer membrane protein, tolC-like [Janthinobacterium sp. Marseille] Length = 501 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/339 (20%), Positives = 154/339 (45%), Gaps = 14/339 (4%) Query: 120 LDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYID-ARHFKERISIA 177 L+ + D +G+ + S+L+ +A A+ A+L + + + +++ AR + + + + Sbjct: 146 LNFSYDFDFWGKHAAELRSALSAGKAAQAEQYNARLVISTAVARAWVQLARQYGQ-LDLN 204 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 + L + L+ L+F G ++ ++ + S+ ++ L ++ + + ++ LL Sbjct: 205 QEQLKASAEIQRLTQLRFKVGLGTQSENQQVTQSLASLRAENAQLNEAIALTRNQLAALL 264 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G L Q + I + +P LI RPDI + + I AK+ Sbjct: 265 GKGPDRGL---QIERPALPSETAIALPDALPLGLIGRRPDIVAARWNVEAAQGDIDAAKT 321 Query: 298 DLYPS---LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 YP+ ++ G ++ +N + GP +YLPIFD+ +++N++ +S Sbjct: 322 LFYPNVNIMAFAGFSSIGLNNLLKSSSGIVGVGPAIYLPIFDR-SLRANLKGRVASYDGL 380 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQH-AVELHKKSMSLSMINYRQGRYSLLD 413 T+ +T+ A+ +V + + S+ + ++ QH A + S L+ R G ++L Sbjct: 381 IATYNQTLTEALHDVADQVQSLRA-ATLQSEQQHLATQASSNSFQLAQQRERVGTTNMLP 439 Query: 414 ILDIERA-TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +L + ++ +DL R+ + + L A+G G++ Sbjct: 440 VLSAQMTLLSQRRIDLDTQARR-SDLRITLIKALGGGFD 477 >gi|325927209|ref|ZP_08188469.1| outer membrane protein [Xanthomonas perforans 91-118] gi|325542407|gb|EGD13889.1| outer membrane protein [Xanthomonas perforans 91-118] Length = 243 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 26/236 (11%) Query: 7 IFSLFIVLLAGCTVGPEYTKP-----HMPLLPTQF-SIGNSKNLINID-TLKWWESFNDT 59 + +L +L A TVGP Y P P F GN++ +WW + D Sbjct: 11 VAALLSMLSACSTVGPNYAVPAESAYQRPAANAAFLDTGNAQVQPGAALPARWWALYQDP 70 Query: 60 SLNKLVKIALQQNLTILQAT---ERINAAKENILSV------------RADLFPSSYASI 104 L+ L++ AL+ N+ + A R A E + RA + S+ A + Sbjct: 71 MLDGLIEQALRDNVELKVAGANLRRAAAVYEQAMDAGGFDYDVEAGVSRAQV--SAEAFL 128 Query: 105 SHRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPS 163 +P + G+ ++ DLFG+ +R E++ A+ A A +D+A+++V +++ S Sbjct: 129 QEEKLPVFNL-ADGKFGVSYQFDLFGKLQRGAEAAHADTQVAQAAIDLARVSVAAQVAGS 187 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 Y++ H + +A L L + + +++ G + L + A++ +E+ + Sbjct: 188 YVEICHANHELQVAAHSLQLQQHSRQITQRLIAAGRGTPPDLARATAQVAMLEAAL 243 >gi|168818120|ref|ZP_02830120.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345053|gb|EDZ31817.1| efflux transporter, outer membrane factor [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086610|emb|CBY96381.1| Multidrug resistance outer membrane protein mdtQ Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 478 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 95/505 (18%), Positives = 198/505 (39%), Gaps = 87/505 (17%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAK---LNVISKLIPSYIDARHFKERI-SIAHQILDLYKKNIELSHLKFT---QGA 199 A+ + + + +++L + K + I H+ ++ N EL T +G Sbjct: 175 AEQEQTQQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNN 254 + + K + ++ + + +E + S L PA E Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES---------- 284 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P +G L+ R D++ + S++ I AK+ YP ++L + AL Sbjct: 285 -----QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + L LPIFD G++ +N+ A++ + + + V++A+ +V Sbjct: 338 HLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVAR 397 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EV 426 A + + + + K QH ++ + + + Q R++ I + AK+ + Sbjct: 398 AASQV---ETLAQKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQC 452 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Q + + L A+G GY+ Sbjct: 453 NGLLLQGQWLDASIQLTSALGGGYH 477 >gi|262040152|ref|ZP_06013405.1| multidrug resistance outer membrane protein MdtQ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042505|gb|EEW43523.1| multidrug resistance outer membrane protein MdtQ [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 479 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 92/445 (20%), Positives = 181/445 (40%), Gaps = 72/445 (16%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D LN L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDPQLNNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDLSADIERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYA-QVD 150 +A+ + TN T L + W +DL+G+ R +++ + L + A Q Sbjct: 118 SAEGLMGPFATDTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVKARIGELKAQVAEQAQ 177 Query: 151 IAKL--NVISKLIPSYIDARHFK--------ERISIAHQILDLYKKNIELSHLKFTQGAT 200 +L +++L + K E+ +I LY++ I S +GA Sbjct: 178 TRELLSGSVARLYWQWQTEAAIKAVLQQVKNEQNNIVTVDKALYQRGITNS----AEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + +++ K + ++ + + +E M + N Q QS N +P Sbjct: 234 NDINVSKTDQQLADVTGTMKEIEARL-MALTN---------------SQSQSLNLKPASL 277 Query: 261 IPINIGIPA----DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTH 313 ++ +P +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PTVSAQLPDTLGYELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDALHL 337 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI------- 366 + F L LPIFD G++ +N+ A + + + V++A+ Sbjct: 338 SDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAKTA 397 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +VE + + +++ Q V+L + M+ ++ + + L L ER TA Sbjct: 398 SQVETLMAKSQQQQQVEKDAQRVVDLAQARMAAGILPGSRVSMAKLPALQ-ERITA---- 452 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 L + Q + + L A+G GY+ Sbjct: 453 -LRL-HGQWIDASIQLTSALGGGYH 475 >gi|320196008|gb|EFW70632.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli WV_060327] Length = 478 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 96/493 (19%), Positives = 190/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LGYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA-----KRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ A + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERAHGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|313202581|ref|YP_004041238.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] gi|312441897|gb|ADQ78253.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] Length = 435 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 11/257 (4%) Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D F +R+I+ + + + ++ A ++ K ++ + ++ KE + IA LDL K Sbjct: 106 FDGFKMKRNIDLAKSEMYASEADLEKIKQDITVNVAAGFLQILLNKELLQIAVDQLDLTK 165 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 IE G S+ L L A+ E + + + ++++ +++ L E L Sbjct: 166 TKIEQRKALVASGKMSEGELYDLIAQESKEELNRLRADNTLKLSLLDLAQFLELENFENL 225 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + SN + +L+ + + +RP+I+ E +L S+ + IAK YP+LS Sbjct: 226 DIVAP-SNLSESDLHFLSAEEVLQSALTHRPEIKGAEYRLKSSLYNVQIAKGSYYPTLSF 284 Query: 306 NGSIALTHDN-------SFPGY---NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + + N SF N SFG L +PIF+K ++N+R AE S + Sbjct: 285 GANYGTNYYNISNIPNKSFSQQIKDNKSTSFGFNLQVPIFNKFATRNNVRSAEISVKSNS 344 Query: 356 ITWQETVLNAIKEVENA 372 I L K ++ A Sbjct: 345 IAVDNAKLELKKTIQQA 361 >gi|324006486|gb|EGB75705.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 57-2] Length = 478 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 95/493 (19%), Positives = 191/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|220926265|ref|YP_002501567.1| type I secretion outer membrane protein, TolC family [Methylobacterium nodulans ORS 2060] gi|219950872|gb|ACL61264.1| type I secretion outer membrane protein, TolC family [Methylobacterium nodulans ORS 2060] Length = 518 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 24/280 (8%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 214 LELNRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSLAESTLRADIAIY 273 Query: 234 STLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADL-IRNRPDIRYQEKKLADSVAK 291 ++G +Q +P + ++P ++G D+ +R P + + + A+ Sbjct: 274 RQVVGVEP--------RQLAPGRPLDRFVPSSLGTAVDIGLREHPQVIAALHAVDAAEAQ 325 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAE-- 348 + IA+S LYP++S++GS+ D F + +L +P++ G + IR+A+ Sbjct: 326 VKIAESALYPTVSVSGSVQKLFDQQFANSEQFQGTVTAQLSVPLYQGGAEYAAIRQAKEQ 385 Query: 349 -SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 A+ Q +++ V AI AL + K V Q V+ ++ +++ R G Sbjct: 386 VGQARIQVEIFRDQVRAAIVSAWGALDAA---KARVIAQQAQVQANEVALNGVREEARVG 442 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + LD+L+ ++ V+L A+R S + +IG Sbjct: 443 QRTTLDVLNAQQELLSARVNLITAQRDRVVSSYQVVQSIG 482 >gi|222033900|emb|CAP76641.1| Multidrug resistance outer membrane protein mdtQ [Escherichia coli LF82] gi|312946757|gb|ADR27584.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O83:H1 str. NRG 857C] Length = 478 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 95/493 (19%), Positives = 191/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSA--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|241760189|ref|ZP_04758286.1| putative outer membrane multidrug resistance lipoprotein [Neisseria flavescens SK114] gi|241319386|gb|EER55844.1| putative outer membrane multidrug resistance lipoprotein [Neisseria flavescens SK114] Length = 468 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 88/425 (20%), Positives = 164/425 (38%), Gaps = 36/425 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW D LN L+ A+Q + + R A+ + V A P I Sbjct: 51 WWMKLKDKKLNNLIASAIQTSTNLRVVKARFEQAQAQLGVVGAANKPQLGLGVTGIGTYV 110 Query: 109 IPNLKTNSTGQLDSDWKI-------------DLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 P + G +D+D + D +G+ R I++ L +A + + Sbjct: 111 SPKPQA---GMVDTDHTLVLAHAALQGSLVFDFWGKNREQIQAVLGKSRAAVYEAHHIRT 167 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + Y + E++++ ++L K ++L + +L LE + Sbjct: 168 ELAHAVTAQYFAWQMATEQLALLDTRIELADKALKLMQQRVKAQLAPADALHALEMAQQQ 227 Query: 215 IESDIPTLEKSFRMN----VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 ++ LEKS + N +L L+ + P+L P++ I AD Sbjct: 228 LQ-----LEKSAWTQKNEKIRNSLAVLTGRVPGALNGQVPEKMAAVPSL--PVSR-IEAD 279 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFG- 327 L+ RPDI Q+ L + + +++ YP++ L +TH ++F T G Sbjct: 280 LLAARPDIAAQKALLEEKWHIVKSTEAEFYPNIELKVLAGMTHIDAFNLIRGRTSGMLGI 339 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 P L LP+F G ++S + + EQ + +TVLNA++ +A+ K Sbjct: 340 VPALNLPLFTSGALQSKLAGKRAQYNEQVAVYDQTVLNAMRSAADAVVDYQSLKSRQDTW 399 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 V + KS+ + R G + L L + A+ ++ + ++ DL + Sbjct: 400 NKMVNIADKSVQNAKGRVRAGLDNGLTALQKQDEAARTKMSAVQYHAEYLTAWSDLNAQL 459 Query: 447 GSGYN 451 G G+ Sbjct: 460 GGGFQ 464 >gi|188591819|ref|YP_001796418.1| Cobalt-zinc-cadmium resistance protein, cation efflux system [Cupriavidus taiwanensis] gi|170939214|emb|CAP64257.1| Cobalt-zinc-cadmium resistance protein, cation efflux system [Cupriavidus taiwanensis LMG 19424] Length = 418 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/316 (22%), Positives = 141/316 (44%), Gaps = 35/316 (11%) Query: 116 STGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 +TGQ++ ++L G+R I ++ D A AQ+ + ++ + +I ++ +ER+ Sbjct: 97 TTGQVN--IPLELGGKRSARIAAAERGRDVAQAQLSSLRADLRASVIAAFFGVLIAQERV 154 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 +A D+ K + + + G S + K E + E ++ + ++ Sbjct: 155 KLATGSADIAAKGAQAAARRVAAGKISPVDETKARVEQANAELEVAEATAELQTARQALA 214 Query: 235 TLLGYPA---TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 TL G + TE + + P+L + A+L R+ P + +L A Sbjct: 215 TLWGNASPQFTEAVGDLDALPTRPAPDL-------LRAELERS-PALLANRLELDRRQAL 266 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDK--GKIKSNIRRAE 348 +G+ +S YP L+L S+ DN N + + G + LP+FD+ G + IRRA+ Sbjct: 267 VGVERSRQYPDLTL--SVGAKRDNE---ANRNMAVLGVAIPLPLFDRNQGNLYEAIRRAD 321 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKK-----IVTKLQHAVELHKKSMSLSMIN 403 AQ++Y+ Q + NA+++ N L+ + ++ Q A + K Sbjct: 322 K-AQDEYLASQIRLNNALQQASNQLSVSRASAQALKTTVLPGAQQAYDAATK-------G 373 Query: 404 YRQGRYSLLDILDIER 419 + G+++ LD+LD +R Sbjct: 374 FEAGKFNFLDVLDAQR 389 >gi|237721063|ref|ZP_04551544.1| outer membrane efflux protein [Bacteroides sp. 2_2_4] gi|229449898|gb|EEO55689.1| outer membrane efflux protein [Bacteroides sp. 2_2_4] Length = 463 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTLK + + L + A +QN+TI + RI AA ++ + +A LFPS Sbjct: 28 LQVDTLKETKIPDQWDLQSCIDYAKEQNITIRK--NRITAASTQIDVKTAKAALFPSLSF 85 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S H+ + N KT+ G L++ W + G +R L Sbjct: 86 STGHQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 144 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 145 NNQMAELDVATSENNIQESIAQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSI 204 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K L +LEA++ + + T + +TL Y N N+Y Sbjct: 205 AKSDLAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 252 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS +P++SL+ Sbjct: 253 LPALSDENVLAPLPTKRDVYISALSFRPEIEASKLNVEASELGINIAKSSYFPTISLSAG 312 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 313 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 359 >gi|312960748|ref|ZP_07775253.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] gi|311284406|gb|EFQ62982.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas fluorescens WH6] Length = 251 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 3/115 (2%) Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNS-FP 318 P I + + + R D+R E+ L + A IG A++ +PS++L+ IA N+ F Sbjct: 50 PWLIELSSQRLLQRFDVRQCEQALRAANANIGAARAAFFPSITLSTGAGIASPRLNTLFS 109 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 + W F P+L LP+FD G+ ++N+ A + Q +++TV +A +E+ + L Sbjct: 110 SGSGAWLFTPQLNLPLFDGGRNQANLDLATARQQSAVAQYEKTVQDAFREIADLL 164 >gi|300779140|ref|ZP_07088998.1| RND efflux system outer membrane lipoprotein [Chryseobacterium gleum ATCC 35910] gi|300504650|gb|EFK35790.1| RND efflux system outer membrane lipoprotein [Chryseobacterium gleum ATCC 35910] Length = 483 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 103/494 (20%), Positives = 198/494 (40%), Gaps = 68/494 (13%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTK-PHMPLLPTQF-SIGNSKNLINIDTLKWWESFNDT 59 NIL + SL +V C V P+ T+ LP + +KN + F D Sbjct: 8 NILYGMASLSLV---SCAV-PKVTELKKAQQLPDEIIKTDKNKNTDEFQQINLKAYFTDP 63 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------SYASISHRFI 109 L +L +Q N A +R+ A + + DL PS Y + + Sbjct: 64 YLLELFDKVVQANPDFQIAQQRVEIANSFLQRSKMDLLPSLEVGIEASGNRYGKYTMEGV 123 Query: 110 PNLKTNSTGQLDSD------------------WKIDLFGQ--RRHIESSLANLDSAYAQV 149 N TN + + D W+ID +G+ + I + L S + Sbjct: 124 GNYDTNLSPNITEDQKINRDFTPNYWLGARSSWEIDAWGKLKNKKIAAQKKYLASTEG-L 182 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + ++ + + + Y R++I + +L ++ E+ + G ++L++ + + Sbjct: 183 RLLQVELFTDIANLYYQLVALDNRLAIYQKNYNLQQRAFEIVLAQREVGKATELAVQQFK 242 Query: 210 A-------EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 A EI+ I +I T+E++ I+TL G E K+ P Sbjct: 243 AQNNNWLAEIEHIRVEIVTVEQA-------ITTLTGSYGGEV-----KRGKVLMPTNMDV 290 Query: 263 INIGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF---- 317 +N I + +I +RPD+ L S A A++ YP + L L NSF Sbjct: 291 LNKTINVENVIHSRPDVAANYYVLEASQADAKAARAAFYPKIDLGAGFGL---NSFSVET 347 Query: 318 ---PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 PG G L +P+F+KG++K + A + ++ +Q+++ A E+++ L Sbjct: 348 FFKPGSLAGQLLGG-LMVPVFNKGQLKYEFKVASKEQEIAFLNYQKSITTAFNELQSILK 406 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 ++++ V + + +S Y G + ++++ +++ E+DL + Q Sbjct: 407 QTKIYERVLKLKSEEVGFLDRGVEVSNDLYLTGYANYFELINSQKSKLTAELDLLQFQHQ 466 Query: 435 LAKSYVDLYIAIGS 448 ++ V L+ A+G Sbjct: 467 NTRNNVLLFKALGG 480 >gi|215487360|ref|YP_002329791.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O127:H6 str. E2348/69] gi|215265432|emb|CAS09833.1| predicted channel/filament proteins [Escherichia coli O127:H6 str. E2348/69] Length = 478 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A FSL + +LAGC P+ T+ ++ +DT+ +WW Sbjct: 11 ACFSLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LGYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|257455138|ref|ZP_05620376.1| putative channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes [Enhydrobacter aerosaccus SK60] gi|257447471|gb|EEV22476.1| putative channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes [Enhydrobacter aerosaccus SK60] Length = 446 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 12/270 (4%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K ++ + QG +++ + A ++S+ + I + + +S L G P + Sbjct: 169 KAQNDMMQARLAQGVAARVDTEESRARLESVSASIANNDVAIVNAKQQLSLLTGQPINQL 228 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIR---NRPDIRYQEKKLADSVAKIGIAKSDLYP 301 S P+L + + I + + N DI+ + ++A + ++ K++ YP Sbjct: 229 ------DSIKLPPDLNLVASQSIDNWMQQSQNNNLDIQLAQTQVAIANKQVDYLKANTYP 282 Query: 302 SLSLNGSIAL---THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 + L G++ TH+N T++SFG ++ P + G+ ++ + + AQ Sbjct: 283 RVDLVGNVGWQDYTHNNVSAIDGTNYSFGVEVDFPFYTGGRTRAGVEQGNLQAQAAKSRL 342 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 A+ + A ++ + + Q AVE +++ S Y G S++D L E Sbjct: 343 AYVYQAAMTQTSQAYLNLIAQRATIKAQQVAVEANRRVAQASKTGYDLGVRSMVDTLLAE 402 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 R + DL A +Y+DL A G+ Sbjct: 403 RQYHAAKRDLINAYFDYLNAYIDLQKAAGN 432 >gi|332880143|ref|ZP_08447825.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681902|gb|EGJ54817.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 452 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/336 (24%), Positives = 133/336 (39%), Gaps = 50/336 (14%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQA--TERINAAKENILSVRADLFPS------ 99 D+ +W SL + + A+ N+ + Q TE AA ++L +A+LFPS Sbjct: 26 DSTRW-------SLQECIDYAIAHNIQLKQNKITEEQGAA--DLLQKKAELFPSLSFSTT 76 Query: 100 ----------SYASISHRFIPN-----LKTNSTGQLDSDWKI-DLFGQRRHIESS-LANL 142 S SI I N L N L++ W + D R++I++ L N Sbjct: 77 QAIDYRPLQKSETSIVANGIANSSSNKLTENGNYGLNASWTVWDGGANRKNIKAQKLQNQ 136 Query: 143 DSAYAQVDIAKLNVISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 SA A A N I + I Y+ + K+ + + + + K E F QG S Sbjct: 137 ISALATQTTA--NSIQEQIAQLYVQILYSKDALDVNKAMEETAKSQFERGKEMFEQGQIS 194 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 K L +LE++ S + D + + LL +N+ I Sbjct: 195 KADLAQLESQAASAQYDCVATQTQIDNYKRQLKELLEITDDRKFDISGIGTNDEATMQLI 254 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-- 319 P + + RP+I+ + + I IAK+ YPS+SL I +H + G Sbjct: 255 PSVNEVYQKALNLRPEIQSSRLSIDAADLDIDIAKAGYYPSISLTAGIGDSH---YSGSR 311 Query: 320 --------YNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N S G L +PIFD + K+N+++A Sbjct: 312 ESAGEQMRQNLSASAGVTLSIPIFDNKRNKTNVQKA 347 >gi|78358666|ref|YP_390115.1| outer membrane efflux protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221071|gb|ABB40420.1| outer membrane efflux protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 461 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/417 (21%), Positives = 169/417 (40%), Gaps = 46/417 (11%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-------------R 107 L + V ALQ N +I A AA+E+ + R PS S + + Sbjct: 50 LEQAVLKALQDNPSIRAAKAGDLAAEESRKAARGGFGPSLTGSYGYLKSDHDKPRRDFVQ 109 Query: 108 FIPNLKT---NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 + NL T N T L + + + Q+ +E + A AQVD A+L +I + ++ Sbjct: 110 YEDNLYTLGVNLTQPLFTGFNVLSTYQKAALEK-----EQAAAQVDNAELQLILLVQENF 164 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E A L+ + ++++ + G ++ +++ E ++ E + E Sbjct: 165 LQLLAARENQRSAADQLERLQSQLKVTQAFYDVGLNPRIDVLQAERDVSDAEDKLLQAEN 224 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL---IRNRPDIRYQ 281 S + + ++TLL P Y+ + ++P ++ + L R RPDI Sbjct: 225 SVQTQIARLNTLLNLPLDASASYLGRLD-------FVPFSLTLEECLERAYRRRPDIFIA 277 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-------SFPGYNTHWSFGPKLYLPI 334 +K + + IA+S YP + + DN + + WS G + Sbjct: 278 QKAIEVARKDRTIAQSGFYPQIGAEADYSRKGDNPVVDGSSAMSTEFSEWSVGVSAKWNL 337 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INEDKKIVTKLQHAV 390 FD GK A+S+A + N +EV + S ++E K + Q V Sbjct: 338 FDSGKDYY----AQSAAAQVVNRVMADEANLRQEVAFEVKSRHLKLSEAAKRIKVAQKTV 393 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ +++ Y+ + D+LD + + E L+ A+ + + LY++IG Sbjct: 394 DQAAEAYRMAVARYQAQVGTNTDVLDAQASLTSAEAALTSAQAEYLVALASLYVSIG 450 >gi|189461585|ref|ZP_03010370.1| hypothetical protein BACCOP_02244 [Bacteroides coprocola DSM 17136] gi|189431695|gb|EDV00680.1| hypothetical protein BACCOP_02244 [Bacteroides coprocola DSM 17136] Length = 459 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 32/318 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------- 109 +L + AL++N+ + Q + ++ ++ S +A+LFPS S H I Sbjct: 39 TLEDCINYALEKNIQLQQNKISLQESEIDVKSAKANLFPSLSFSTGHNMINRPYQEQSAT 98 Query: 110 --------PNLKTNSTGQ--LDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVIS 158 + KT G L++ W + G+R + I+ N D A V + + Sbjct: 99 VSGTEIITSDNKTTYNGNYSLNAQWTLWNGGKRLNTIKQEKTNRDIAGLAVTETENTLQE 158 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +I + E I+I L++ + F +G+ SK L +LEA++ + + Sbjct: 159 EIAKLFIQILYADESININKNTLEVSTATFNRAQELFKEGSISKADLAQLEAQVSNDKYQ 218 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + T E S R + LL T + N+ +P I + RP+I Sbjct: 219 LVTAESSLRNYKLQLKQLLELDGTAEMKLALPTLNDEHVMEVLPSQTDIYQTALATRPEI 278 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP---------GYNTHWSFGPK 329 + + + ++ I +AK+ YP++SL+ S + T +++ G+N G Sbjct: 279 QSSQLSIENAKLGISVAKAGYYPTISLSASSSSTTNSASTNNWAQQMKYGWNNM--IGIS 336 Query: 330 LYLPIFDKGKIKSNIRRA 347 L +PIFD + KSN+++A Sbjct: 337 LSIPIFDNRQNKSNVQKA 354 >gi|294674594|ref|YP_003575210.1| outer membrane efflux protein [Prevotella ruminicola 23] gi|294473773|gb|ADE83162.1| outer membrane efflux protein [Prevotella ruminicola 23] Length = 443 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 37/325 (11%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL++A A ++ AK ++ ++ +Y+ + E +AH+ +++ + G Sbjct: 119 NLEAATADLEKAKNDIRMQVAQAYVQILYDMEMADVAHRQIEIDSAQVARLQAFVDNGKA 178 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL--GYPATEFLHYMQKQSNNFQPN 258 S + L + +A + + + + + R+ V ++ LL P ++ K+ + N Sbjct: 179 SGVELSQQKATLANSKLTATQADNNMRLAVLTLTQLLELDTPEGFAINRPTKEDLDMIAN 238 Query: 259 LYIPINIGIP----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH- 313 L +NI P A+ + +P+I Q+ KL + I IA++ YP+LSL+G + + Sbjct: 239 L---VNIVTPDQVYAEALGIKPEILSQQLKLKGAAHSIKIAQAGYYPTLSLSGGLGTNYY 295 Query: 314 --------------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +N+F Y G L +PIF++ ++ IR A Q + Sbjct: 296 TTSGLKSDGLGKQLENNFSQY-----IGLNLSVPIFNRFSTRNRIRSARVDQANQQLQLD 350 Query: 360 ETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 T KE++ ++N K + + AV+ K + L Y G+ ++ + + + Sbjct: 351 NTKKTLYKEIQQVYYNALNAQTKTQSSAE-AVKSSKDAFDLVQAKYENGKATITEFNEAK 409 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLY 443 K E DL A+ Y +LY Sbjct: 410 NNYMKSESDLVQAR------YENLY 428 >gi|225849047|ref|YP_002729211.1| outer membrane efflux protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644196|gb|ACN99246.1| outer membrane efflux protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 420 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 105/441 (23%), Positives = 186/441 (42%), Gaps = 69/441 (15%) Query: 47 IDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLF-PSSYASIS 105 I +L + S N +L + V AL+ N IL ++I A E L V L+ P+ Y +S Sbjct: 5 IFSLIFISSANAITLQEAVNKALENNKEILSYKQQIKTA-EFQLKVDQTLYLPTIYTQVS 63 Query: 106 HRF--------IPNLKTNSTGQLDSDW-KIDL-FGQ--------RRHIESSLANLDSAYA 147 F IPN S Q + D+ K D+ F Q + IE+S NL + + Sbjct: 64 QSFYNQTPMTKIPNFPV-SFKQSNRDFLKFDIGFSQSLYTGGLTQAKIEASKYNLKATQS 122 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL-------SHLKFTQGAT 200 + + +++I +YID + I+ ++D+YKK +E F +G Sbjct: 123 FYKEKENQIKAEVIKAYID-------VFISKSLIDIYKKELEAVESIYKQQEAFFKEGII 175 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K+ L++ + + ++ D+ E ++++ + +S L+G + NF+P L Sbjct: 176 TKVDLLQSKVRLAEVKRDLQQAEGNYKIALSRLSQLIGEDL---------KDENFEP-LN 225 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAK--------IGIAKSDLYPSLSLNGSIALT 312 I I IP+ + + YQ++K+ D + + I KS P + L G T Sbjct: 226 IEIK-DIPS--LDTLIETAYQKRKILDFYKENINQAEKVVEIEKSAFLPKVFLQGDYIYT 282 Query: 313 HDNSF--PGYNTHWSFGPKLYL----PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 + + + P N + G + P + + KSN ++ Q+ T ++ L Sbjct: 283 NQSPYLDPKGNFLLTLGASIEFQTTQPYYKILQAKSNAKKLRFDLQD---TKEKIKLELK 339 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EN +T+ K + L +A K+ L Y + D+L+ E A + Sbjct: 340 TAYENYITAKENYKVALESLDYA----KEYFELVKEQYTNQLATNTDLLNAESALTRALE 395 Query: 427 DLSIAKRQLAKSYVDLYIAIG 447 I L KSY+D+ A+G Sbjct: 396 SKEINYYNLLKSYIDIKKAVG 416 >gi|325294681|ref|YP_004281195.1| outer membrane efflux protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065129|gb|ADY73136.1| outer membrane efflux protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 441 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/301 (21%), Positives = 133/301 (44%), Gaps = 11/301 (3%) Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 DI K VI ++ +Y + K + A + +K ++ + + + G K ++ + Sbjct: 138 DIEK--VIFDVVNAYYNLLTAKAFVETAQLAVKDAEKRLKDAEVTYRSGLGLKSDYLRAK 195 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIGIP 268 +K +E ++ + ++ + ++ +G P + + + + NFQ NL I + Sbjct: 196 VYLKEMEENLVKAKSNYEIAKRALNLAIGLPISHQIEVNEDLTFKNFQFNLSDLIKTAL- 254 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFG 327 RNRP+++ KL+ + +A+SD P + G + D + + N+ W FG Sbjct: 255 ----RNRPELKELRVKLSQAKDMERLARSDFSPRIGAFGDYFIASDKAPWNKENSSWVFG 310 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKL 386 + L IFD G IK R +Q + + E I+ EV A E KK V Sbjct: 311 VQASLNIFDGG-IKFEKLRKSRISQLKIKEYIEKAKKGIEFEVSKAYFRFQEAKKRVELA 369 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + A++ ++S+ + Y+ G ++ ++LD + A + + A ++ ++Y A Sbjct: 370 EEAIKEAQESLRIVEKRYKNGLATISELLDTQTALNQARSNYVAALSAYRRAVAEIYYAE 429 Query: 447 G 447 G Sbjct: 430 G 430 >gi|222823918|ref|YP_002575492.1| outer membrane efflux protein [Campylobacter lari RM2100] gi|222539140|gb|ACM64241.1| outer membrane efflux protein [Campylobacter lari RM2100] Length = 446 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 88/413 (21%), Positives = 179/413 (43%), Gaps = 38/413 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRA-------DLFPSSYASI 104 WWE +N+ LN ++K I+ + +N A+ N LS A DL+P+ ++ Sbjct: 43 WWEKYNNQDLNNILK-------AIIDNNKDLNVARVNFLSTLARYKLLNLDLYPTLSGNL 95 Query: 105 SHRFIPNLKTNSTGQLDS-------DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 NL N+ ++ S ++++D++G+ + SS ++ ++ +L+ Sbjct: 96 GVNIRKNL--NNGAEMHSFSNGIMLNYELDIYGKISDQVASSEFLAKASEYELRSLELDT 153 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 I+ I S + +F + + + L ++ +E+ KF G + L+ ++ + + + Sbjct: 154 INLAINSIFELIYFNDVDRLLNNHLKNLEQMLEIYTTKFDYGKVEYIDLLNIKKSLLNTK 213 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADLIRNR 275 +I ++ + + NI LLG EFL + K N + + IN I ++ R Sbjct: 214 QNIIANLQNKDLTLKNIKDLLG-KDDEFL--INKMLNYTLEDFSLQKINFDIELKMLAYR 270 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF---GPKLY- 331 P ++ + +L S + + PS+ + G++ D S ++ + F G + Sbjct: 271 PQVQAKLNQLMASYKDYASVQKSILPSIKILGNL----DGSDKNFDDSFKFLILGGNVVI 326 Query: 332 -LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LP D +++ N++ +E Q + +++ + AI E + + ++ ++ Sbjct: 327 DLPFLDFYRVRQNVKISEFVYQARLYEYKDALQRAIHEFKLCYENDKYYNDLLNLVKDIN 386 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 K L Y GR L D LD + +LS AK L K+ V+LY Sbjct: 387 TNQAKITQLYFEKYELGRNELKDYLDADALLINSLQELSRAKLSLLKN-VNLY 438 >gi|161502679|ref|YP_001569791.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864026|gb|ABX20649.1| hypothetical protein SARI_00726 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 478 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 95/492 (19%), Positives = 199/492 (40%), Gaps = 71/492 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A LFI LLAGC P+ T+ S+ +ID+ +WW Sbjct: 11 ASLPLFI-LLAGCA----------PVHDTRQSLTQQTPSSHIDSTLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------------ 95 ++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 60 KAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADVERQRMSA 119 Query: 96 ---LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + P + + TN T L + W +DL+G+ R + + + + + A+ + Sbjct: 120 EGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKAREAEQEQ 179 Query: 152 AK---LNVISKLIPSYIDARHFKERIS-IAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + + +++L + K ++ I H+ ++ N EL + G TS + V+ Sbjct: 180 TRQLLASGVARLYWEWQTQAALKNVLTQIEHEQQNVVAVNREL----YQHGITSSVEGVE 235 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 + + + + + ++ +S L + L Q + + L P +G Sbjct: 236 TDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAA-LKLRQVRLPAIESQL--PTQLGY 292 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 L+ R D++ + S++ I AK+ YP ++L + AL + F + Sbjct: 293 --SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQY 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + + + V++A+ +V + + + + Sbjct: 351 GITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARTASQV---ETLAQ 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + + + Q R++ I + AK+ + + + + Q + Sbjct: 408 KNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGYN 451 + L A+G GY+ Sbjct: 466 IQLTSALGGGYH 477 >gi|296448130|ref|ZP_06890030.1| outer membrane efflux protein [Methylosinus trichosporium OB3b] gi|296254353|gb|EFH01480.1| outer membrane efflux protein [Methylosinus trichosporium OB3b] Length = 177 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS ++ G + + +R +E++ ++ +++TVL A +EVE+ L +I ++ V Sbjct: 16 WSLVGGATQTLYAGGLLDAQLRASEANYRQGLADYRQTVLAAFQEVEDELAAIRLLRQQV 75 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE-RATAKVEVDLSIAKRQLAKSYVDL 442 +L AVE ++++++ + YR G +S ++ E R A + DL+ A++ L + V L Sbjct: 76 QRLDQAVEEARQAVTIYLNQYRVGTFSFTSVVTAEQRLLANFQADLA-ARQSLFVATVTL 134 Query: 443 YIAIGSGYN 451 A+G G++ Sbjct: 135 IGALGGGWD 143 >gi|330969953|gb|EGH70019.1| outer membrane efflux protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 118 Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 62/115 (53%) Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + L + + + Sbjct: 2 GSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAA 61 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 L+ + YR+G L +LD ER E + A+ +L + V +Y A+G G+ P Sbjct: 62 RLASVQYREGTADFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQP 116 >gi|254445817|ref|ZP_05059293.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198260125|gb|EDY84433.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 445 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 76/392 (19%), Positives = 163/392 (41%), Gaps = 41/392 (10%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISH- 106 +E ++ + + AL+ N IL+A +RI ++ VRA P Y I Sbjct: 26 YEIPDELDIETALGFALEHNFDILRAKQRIEEQNGLVIEVRAQALPDLSVQGQYTEIDEG 85 Query: 107 -----RFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 F P + T W + + Q R + + +A D+ + + + +L Sbjct: 86 LSDPDNFGPAVTTQ--------WSLAV--QARQTLYAGGGVRAALNVQDLIEQSALLELE 135 Query: 162 P-----------SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 Y A + RI + + ++L ++ +E + +F G S+ +++ E Sbjct: 136 AVVNDTLLSTRVGYYSALLARARIGVQEENVNLLEELLESAKDRFEVGIDSRFEVLRAEV 195 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPA 269 + + + + +R+ + + LLG+ + E Q+++ L Y P+N + + Sbjct: 196 SLANARPALIQAQNDYRIAIEELRELLGFFSIEGGD--QRKAPVLHGELEYSPVNYDLDS 253 Query: 270 DLIR---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT---H 323 L RP+++ K + IAKS P ++L G ++ ++ Sbjct: 254 SLSSARAKRPELQRLAKVAEAREEGVIIAKSGYRPEVALVGFYQFNKASASSSFDDSLEG 313 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W+ G ++ +PIFD + + + +A+S ++ + Q+ L +V AL+ + ++ Sbjct: 314 WTAGLQVSVPIFDGRRTRGQVVQAKSQLEQSKLEVQQFTLAVEVDVRRALSDLQAAAELA 373 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 V +++++L+ + Y G S LD+L Sbjct: 374 EASIQVVGQAEEALNLADVRYEAGDASQLDVL 405 >gi|260881509|ref|ZP_05404580.2| putative outer membrane efflux protein [Mitsuokella multacida DSM 20544] gi|260848622|gb|EEX68629.1| putative outer membrane efflux protein [Mitsuokella multacida DSM 20544] Length = 498 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 77/378 (20%), Positives = 167/378 (44%), Gaps = 22/378 (5%) Query: 55 SFNDTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 S D SL + +AL QN L I Q E A+ + L + S+ + Sbjct: 25 SCADLSLQDAINLALAQNTSLRITQKGEDTARAQLQQEKIDNGLKITGTESLDTTLKRSS 84 Query: 113 KTNSTGQLDSDWKIDLFGQRR---HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 T+S ++ L+ + +I+S + L +A + ++ N+ +I +Y DA Sbjct: 85 STDSKNEIGVTASYPLYTSGKAEANIDSGVLGLKAAELSTERSRENLKLDVIKAYYDALE 144 Query: 170 FKERISIAHQILDLYKKN-IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + + + +D Y+ + +S L + G+ +++ +++ E+ + D+ + S+ + Sbjct: 145 ARRTVDVRQETVDKYQDHYTNVSQL-YAAGSKARIDVIRSSVELSNAAQDLIKAQNSYEV 203 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL---IRNRPDIRYQEKKL 285 ++ + L +E L+ +++F Y NI + + + RNR D+ K Sbjct: 204 DLATLRNYLNIDRSEPLNL----TSDFS---YDQFNIDMDSCIDYAYRNRKDLMIDLYKY 256 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF---PGYNTHWSFGPKLYLPIFDKGKIKS 342 + ++ AK+D PS++L+ + +H SF ++ + G L +D G ++ Sbjct: 257 QQAENEVKAAKADFGPSVTLSAGPSWSH--SFKPATSSDSDITAGATLSWNFWDNGLTRA 314 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ AE+S +T + + + A ++ E +K + AV+ ++ ++ Sbjct: 315 KVQEAETSRDVAKLTLTKDQEDIDLSLRQAYYNMREAEKRLNSTGDAVKQAEEDYFIARE 374 Query: 403 NYRQGRYSLLDILDIERA 420 YR G +LDI+D + A Sbjct: 375 KYRAGEGLMLDIIDAQEA 392 >gi|170751802|ref|YP_001758062.1| TolC family type I secretion outer membrane protein [Methylobacterium radiotolerans JCM 2831] gi|170658324|gb|ACB27379.1| type I secretion outer membrane protein, TolC family [Methylobacterium radiotolerans JCM 2831] Length = 553 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/262 (20%), Positives = 116/262 (44%), Gaps = 16/262 (6%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 249 LELNRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVAQAESTLRTSIGVY 308 Query: 234 STLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 +G + + + F P +L I +G+ R P + + S A++ Sbjct: 309 RQNIGVEPRQLAP--GRPLDRFVPRSLDQAIAVGL-----REHPQVVSAIHNVDASEAQV 361 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSA 351 + + L P LSL GS++ +D + P + F G +L +PI++ G+ + IR+A+ S Sbjct: 362 KVLEGQLAPQLSLQGSLSQLYDQNGPNQSFFVGFVGGRLSIPIYEGGQTYAQIRQAKESV 421 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + I + ++ + + K V Q V+ ++ +++ R G+ + Sbjct: 422 GQARIQVDQIRDQVRAQIVDFWGRLEAAKAQVIAAQAQVQANEVALNGVREEARVGQRTT 481 Query: 412 LDILDIERATAKVEVDLSIAKR 433 LD+L+ ++ V+L +A+R Sbjct: 482 LDVLNAQQELLNSRVNLIVAQR 503 >gi|220904136|ref|YP_002479448.1| outer membrane efflux protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868435|gb|ACL48770.1| outer membrane efflux protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 476 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/315 (19%), Positives = 132/315 (41%), Gaps = 17/315 (5%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 DS A + A+L + ++ +++ + E + L + + ++ F G + Sbjct: 158 DSDKAALRNAELAMTEQVQTQFLNFLRYDESVRSERDALARLRDQLRITTAFFDVGLRPR 217 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L +++ E +++ E+ + E S ++ ++TLLG+ AT + Y + + ++P Sbjct: 218 LDVLQAEVDVRQAENAVIKAENSRDTSLAKLNTLLGFSATAGVGYTGQLA-------HVP 270 Query: 263 INIGIPADL---IRNRPDIRYQEKKLADSVAKIGIAKSDLYP------SLSLNGSIALTH 313 + L R RPDI K + + +SD YP +++ +G+ Sbjct: 271 FTRSLEQCLEAAYRQRPDIYMAAKSVEIAGKSQQAVQSDYYPQVEAYYNVTQSGNTPDLQ 330 Query: 314 DNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 + G T W G + F G + A + + LN ++++ Sbjct: 331 KDGASGSRTQTWEVGARATWNAFQWGTTYYADKEAGWLVTKMRYEAENLKLNVGYDIKSK 390 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L +++E +K + + AVE ++ ++++ Y++ + D+LD + L+ AK Sbjct: 391 LLAVHEAEKRINVAEKAVEQATEAYNVALARYQEQVGTNFDVLDASSKLTSAQASLTGAK 450 Query: 433 RQLAKSYVDLYIAIG 447 + LY+A+G Sbjct: 451 ADYLTALSQLYVAMG 465 >gi|167841239|ref|ZP_02467923.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia thailandensis MSMB43] Length = 202 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 17/183 (9%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI------- 104 WW +F D L+ L AL N ++ R + AK + SV + +PS+ A+ Sbjct: 7 WWRAFGDPLLDDLETRALASNQSVQAIAARYDQAKAMLASVASAQWPSAGATAGASRARI 66 Query: 105 -SHRFIPNLKTNSTGQLDSDWKI--------DLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + R + N + + +D +I DLFG+ RR +ES+ A+ D A + A+L Sbjct: 67 SADRPLTNYAQPNHSTVQNDVQIGATVSYEPDLFGRLRRSVESAQASADEARDDLANARL 126 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + L SY+ R I + + + L +K ++ + GA S L+L++ +A++ + Sbjct: 127 VMTASLATSYLALRETDAEIDVLSRSVALQRKALDFVSAQHELGAVSGLNLMQQKAQLDA 186 Query: 215 IES 217 + Sbjct: 187 TRT 189 >gi|317406842|gb|EFV86943.1| outer membrane efflux protein [Achromobacter xylosoxidans C54] Length = 257 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 125/258 (48%), Gaps = 20/258 (7%) Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF------- 108 +ND L+ LV+ AL N + A+ + A+ + A PS + S F Sbjct: 4 YNDPVLDGLVEKALAANTDLRVASANLERAQAAVRETEAQQQPSLGVNASPTFGHVSGIQ 63 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 PN + S G S +++DLFGQ RR +E++ A+ +A A D ++ V ++ Sbjct: 64 ELAPGIDPPNRWSYSAGASMS-YQVDLFGQIRRAVEAAGADAQAAQAAYDATRVTVAAET 122 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIE-LSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +Y + +++ A + + +++++ +S L+ G + L + + ++++ + + + Sbjct: 123 ARTYANLCSAGMQLASAEHSVKVQQESLDAVSRLQRA-GRGTALDVTRARSQLEQLRAGL 181 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 P + R ++ ++ L G E + + + Q + IP+ G A L+R RPDIR Sbjct: 182 PPFQAQQRTALYRLAALTGQTPAEIPTTLLQCAAAPQLSQTIPVGDG--AALLRRRPDIR 239 Query: 280 YQEKKLADSVAKIGIAKS 297 E+ LA + A+IG+A + Sbjct: 240 QAERALAAATARIGVATA 257 >gi|116695559|ref|YP_841135.1| outer membrane protein (porin) [Ralstonia eutropha H16] gi|113530058|emb|CAJ96405.1| outer membrane protein (porin) [Ralstonia eutropha H16] Length = 464 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 81/348 (23%), Positives = 149/348 (42%), Gaps = 50/348 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 W SF+D L +L + A+ N + A R+ A+ + + L PS A + R Sbjct: 60 WLASFDDAELQRLAREAIAHNGDLRLAAVRVEQAQALVTMQSSGLLPS--AGVKGR---- 113 Query: 112 LKTNSTGQ---LDSDWKIDLFGQRRHIESSLANLDSAYAQ--------VDIAKLNVISKL 160 +S Q + + W+IDL+G+ R + + +A A V A L Sbjct: 114 -AGHSETQFLSIGASWEIDLWGRIRAQSCAAKSQYAATADEYLWAQRVVAAATAKAWFTL 172 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 I S ++ +++ Q++ + ++ + + T+ A +K +L ++ S+ Sbjct: 173 IRSAKLEDRQRQAVAVQEQLVQIAERRVAIGAAPDTEPAEAKNAL---RTQVDSLRK--- 226 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 E + + LLG YPA E + + K P + I G+PADL+ RPD+ Sbjct: 227 -AELARSQAAQALELLLGRYPAGEIGNSVGKLE---LPAIPIAPQAGLPADLLDRRPDLT 282 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-------LTHDNSFP--GYNTHWSFGPKL 330 ++A + A++ PS+S++ +I L + + P G N + Sbjct: 283 AAAHRVAAAFDLRQSAEAARLPSISISAAITGIRSDVLLLNQSGTPIKGLNG------AI 336 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQ---YITWQETVLNAIKEVENALTS 375 + P+F GK+K+ RA+ + EQ I + + L A+ EV+ L + Sbjct: 337 FAPLFTGGKLKA---RADYYSAEQRAAMIAYGNSALQALGEVDAGLRA 381 >gi|253687799|ref|YP_003016989.1| type I secretion outer membrane protein, TolC family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754377|gb|ACT12453.1| type I secretion outer membrane protein, TolC family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 451 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 26/315 (8%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 Q+ A ++ +L +Y + +E+I++ Y++ +L+ F QG ++ +++ Sbjct: 133 QLRDASQQLLVRLFQAYTNVLFSREQIALVQAQQRAYREQYQLNQRLFQQGEGTRTDMLE 192 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 EA + E+ + + +++ + TLLG P + + + F P P Sbjct: 193 TEARVNLTEAQLIEARDNLDISLRELETLLGMPVG--VDQLATLTPRFMPQPLQPAGYQH 250 Query: 268 PADL-IRNRPDIRYQEKKLADSVAKIGIA--KSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 L +R+ + + LA VAK I ++ P ++L S T ++ YN + Sbjct: 251 WQSLAVRHNAQLLALNQSLA--VAKYSIERNRAGHLPQVTLVASTRNTQSDTENSYNQKY 308 Query: 325 ---SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 S G ++ +PIF G + + R+ AQE+Y Q+T ++ T + Sbjct: 309 DTRSIGIRVSVPIFAGGGVSAATRQ----AQERY---QQTAREKDEQTATIQTELRRQFN 361 Query: 382 IVTKLQ---HAVELHKKSMSLSMINYRQ-----GRYSLLDILDIERATAKVEVDLSIAKR 433 +VT Q A EL +KS +L+++ Q G LD+L+ E+ DL+ A+ Sbjct: 362 LVTSSQAKIRAYELAEKS-ALALVTATQKSVQGGERVNLDVLNAEQQLYGARRDLTEARY 420 Query: 434 QLAKSYVDLYIAIGS 448 +++ L G+ Sbjct: 421 TWLTAWLQLRYYAGT 435 >gi|289672950|ref|ZP_06493840.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 169 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 71/124 (57%), Gaps = 9/124 (7%) Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 LD W++DLFG+ +R +E+S A+ ++A A + ++ +I++++ +Y R + R +IA Sbjct: 25 LDMAWEVDLFGRIQRQLEASDADQEAAEANLYQLQVTLIAEVVDAYGQLRGAQLREAIAR 84 Query: 179 QILDLYKKNIELSHLKFTQ----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 L KN + S TQ G ++L +V+ EA + ++E+ +P L+ + I+ Sbjct: 85 DNL----KNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEATVPQLQAEQARQRNRIA 140 Query: 235 TLLG 238 TLLG Sbjct: 141 TLLG 144 >gi|94495657|ref|ZP_01302237.1| Type I secretion outer membrane protein, TolC [Sphingomonas sp. SKA58] gi|94425045|gb|EAT10066.1| Type I secretion outer membrane protein, TolC [Sphingomonas sp. SKA58] Length = 497 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/341 (19%), Positives = 143/341 (41%), Gaps = 42/341 (12%) Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 R ++++ +++ A + + ++ S+ + +Y+D +S+ +++ + N++ + Sbjct: 112 RNSVKAAEVRVEAGQAGLRGTEASIFSQTVAAYMDVIRDSAIVSLNQANVNVLEVNLQAT 171 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 + +F G ++ + + E+ + SD+ T + + + N L+G + Sbjct: 172 NDRFEVGDLTRTDVAQSESRLALARSDLQTAQANLITSRENYIALVG-----------EA 220 Query: 252 SNNFQPNLYIPINIGIPAD-------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + +P +P G+PAD + + PDI +K+ + A+ + P++S Sbjct: 221 PDALEPPPQLP---GLPADPSIAVRVALNDNPDILAAKKQRDARRYDVKAARGTVLPTIS 277 Query: 305 -------------LNGSIALTHDNSF--PGYNTHWSFGPKLYLPIFDKGKIKSNIRRA-- 347 L G+ NS P N + G +L +P++ G+ + +R+ Sbjct: 278 AFTQAGYTNYLHTLGGTALDADGNSIEGPQVNKQAAAGVQLTIPLYQGGRPAAQVRQNQA 337 Query: 348 -ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ES A EQ I ET N I + A S + + + AV+ S+ Sbjct: 338 LESQAIEQEI---ETERNVIAQTRAAYASWQASLQTIQSSRKAVDATGLSLEGVRAENSV 394 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 G ++LDIL+ E+ V+L A+R + L A+G Sbjct: 395 GSRTILDILNAEQEALIARVELVSAQRNAYVAGFTLLAAMG 435 >gi|158521640|ref|YP_001529510.1| outer membrane efflux protein [Desulfococcus oleovorans Hxd3] gi|158510466|gb|ABW67433.1| outer membrane efflux protein [Desulfococcus oleovorans Hxd3] Length = 438 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 17/264 (6%) Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 D+ + +L +++D H +E ++I+ +I ++N+EL L+ G + SL+ Sbjct: 137 DVTSSRIRLQLRTAFVDLLHARELLNISEEIARRRRQNLELVRLRHDAGREHRGSLLSAR 196 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP- 268 A + E +I + + + + ++ LG T + + S P + G+P Sbjct: 197 ANVAQAEYEIRSARREVSLAMWRLARELGRDGTASVTVAGELS-------VPPADAGMPD 249 Query: 269 -ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 L + P ++ + S+A KS +P + + S + D+ +P WS G Sbjct: 250 FEALTADNPFLKELIAQKEVSLASRDAVKSGFFPQVYADASAGRS-DSDWPPDRDQWSVG 308 Query: 328 PKLYLPIFDKG-------KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 + +P+F+ G K + +R+AE+ A T+ +A +NA+ + + Sbjct: 309 LSVSVPLFEGGSRFAEMRKAGARVRQAEAQATSGRAETLHTLRDAWIAFQNAVDRVAVGR 368 Query: 381 KIVTKLQHAVELHKKSMSLSMINY 404 V + ++ + S +I + Sbjct: 369 AFVEASEERAKIAQVEYSNGLITF 392 >gi|303328311|ref|ZP_07358749.1| outer membrane efflux protein [Desulfovibrio sp. 3_1_syn3] gi|302861641|gb|EFL84577.1| outer membrane efflux protein [Desulfovibrio sp. 3_1_syn3] Length = 483 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/317 (19%), Positives = 133/317 (41%), Gaps = 21/317 (6%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 DS A + A+L++ ++ ++D +E + L + + ++ + G + Sbjct: 167 DSDKASLRKAELDMTEQVQTYFLDYLRAEENVRSERDSLARLRDQLRITKAFYDVGLRPR 226 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L +++ E + E+ + +E + + ++TLLG PAT Y K +++P Sbjct: 227 LDVLQAEVNVSQAENQLIQVENNRDTYLAKLNTLLGLPATARAAYTGKL-------VHVP 279 Query: 263 INIGIPADL---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT------- 312 + L R RPD+ K + + +A+SD YP + +I T Sbjct: 280 FRRSLEQCLEAAYRQRPDLYMAAKSVEIAGKDQRVAQSDYYPQVEAYYNINQTGNTPDLQ 339 Query: 313 --HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 D S G T W G + +F G ++A + ++ L +++ Sbjct: 340 RSGDRSSRG--TTWEVGARATWNVFQWGTTYYADKQAGWLVTKMRYEEEDLKLQVGYDIK 397 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 + L +++E +K ++ + VE ++ ++++ Y++ + D+LD + L+ Sbjct: 398 SKLLAVHEAEKRISVAEKGVEQATEAYNVALARYQEQVGTNFDVLDASSKLTTAQASLTS 457 Query: 431 AKRQLAKSYVDLYIAIG 447 AK + +Y+A+G Sbjct: 458 AKADYLTALAQIYVAMG 474 >gi|209522429|ref|ZP_03271034.1| outer membrane efflux protein [Burkholderia sp. H160] gi|209497132|gb|EDZ97382.1| outer membrane efflux protein [Burkholderia sp. H160] Length = 279 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 19/256 (7%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDT----LKWWESFN 57 I A ++ +AGC + P+ GN+ N D WW ++ Sbjct: 8 GIAAAAVLTILLTMAGCASTGGVAPQTQTINPSSLDAGNAIRAANADAQWPAADWWRVYD 67 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNL-- 112 D LN+ + A N ++ A R+ A RA L P S+S ++ NL Sbjct: 68 DPQLNQWIADAQAGNPSLAAAQARVREAASMAGVARAALAPQVNGSLSIQRQQWADNLFY 127 Query: 113 ---------KTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIP 162 N+TG L + +D +G+ ++ E +L ++ A A+L + + ++ Sbjct: 128 GPGPLAGEQSWNNTGTLALAYHLDFWGKDKNAAERALDLAHASAADARAAQLELQANVVR 187 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +YI+ + IA L ++ ++L++ + G ++L + + E + E I L Sbjct: 188 TYIEMSMNYALLDIAKATLQQQQQIVDLANRRLKGGIGTQLEVSQAETPMPEYERQIDAL 247 Query: 223 EKSFRMNVHNISTLLG 238 E+ + + ++ L G Sbjct: 248 EEKIALGRNQLAALAG 263 >gi|189423239|ref|YP_001950416.1| outer membrane efflux protein [Geobacter lovleyi SZ] gi|189419498|gb|ACD93896.1| outer membrane efflux protein [Geobacter lovleyi SZ] Length = 433 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 81/411 (19%), Positives = 168/411 (40%), Gaps = 32/411 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS--- 116 +L +KIA +NL I +A E N + + RA P + + T + Sbjct: 25 TLEDCLKIAGDKNLDIQKAREYANYVQGRYVEERAAALPQLGLQAGFGYSKDDSTKALYG 84 Query: 117 TGQLDSDWKIDL--------FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 Q+ ++ +DL +G+ + ++ L +A Q+ + + + ++ D Sbjct: 85 ASQMQANRTVDLSLSQPLYTWGKIGAALRAAEVGLKTADQQLRLFRQAAFRDVSIAFYDV 144 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 KE +A + L +++ + KF G + L+ E E+++ ++ E S R Sbjct: 145 LLAKELHRLAQENLAQKERHHTEAKRKFEAGVATDYDLLAAEVELQNARPELIRTENSIR 204 Query: 228 MNVHNISTLLGYPATEF-----LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + LLG E + +Q F +L I ++ RP++ Q+ Sbjct: 205 TSRERLRFLLGADQPELDVAGRIEAKPEQIPGFDESLKIALD---------KRPELADQK 255 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTH-----WSFGPKLYLPIFD 336 ++ + + IA +D P L L G+ + S PG W+ G L P FD Sbjct: 256 LRIGINQELVTIANADDKPRLDLKGTAGWHQLEVSDPGPRRQSDGPAWNAGIYLTFPFFD 315 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + + ++A S + + Q+ + E+ A ++ E + +T L V+ ++ Sbjct: 316 GLRSRGRTQQARSDLRTSQLQEQKLRDSIALELRTARYNLAESAETITALSGTVKQAERL 375 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ + G + L++ D + + + +L+ A R + V+L A+G Sbjct: 376 LQMAEKGFEYGVKTRLEVDDAQTNLLRAQSNLARANRDYLAASVNLLWAMG 426 >gi|189466245|ref|ZP_03015030.1| hypothetical protein BACINT_02616 [Bacteroides intestinalis DSM 17393] gi|189434509|gb|EDV03494.1| hypothetical protein BACINT_02616 [Bacteroides intestinalis DSM 17393] Length = 475 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 54/328 (16%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTN--- 115 L + ALQ N+T+ + +A+ ++ + +A LFPS AS+S R + PN +TN Sbjct: 56 LQTCIDYALQHNITLKRNRISAESAEVDVKTAKAALFPSLSASVSQRIVNRPNSETNTII 115 Query: 116 -------STGQ--------LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NVISK 159 ST + +D+ W + G +R L++ A++++A+ N I + Sbjct: 116 DGDNITSSTSKTSYNGSYGIDASWTL-YNGSKRLNTIKQQKLNNRIAELNVAESENSIEE 174 Query: 160 LIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 I Y+ + E + + L + + + G+ +K L +LE+++ + + Sbjct: 175 SIAQIYVQILYAAEAVKVNENTLAVSQAERDRGQQLLEAGSIAKSDLAQLESQVSTDKYQ 234 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIP----AD 270 + T + +TL Y + NLY+P N+ P D Sbjct: 235 LVTAQ----------ATLQDYKLQLKQLLELDGESEM--NLYLPALGDENVLTPLPTKTD 282 Query: 271 LIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFP-GYN 321 + R RP+I + + S I IAK+ P+LSL+ I T+ N SF Sbjct: 283 VYRAALTFRPEIESGKLNVQASDLDISIAKAGYIPTLSLSAGIGTTNANGNDFSFSEQVK 342 Query: 322 THW--SFGPKLYLPIFDKGKIKSNIRRA 347 +W S G + +PIF+ + KS +++A Sbjct: 343 NNWNNSLGLTVSIPIFNNRQTKSAVQKA 370 >gi|241766033|ref|ZP_04763952.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] gi|241363982|gb|EER59251.1| outer membrane efflux protein [Acidovorax delafieldii 2AN] Length = 268 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 18/223 (8%) Query: 5 RAIFSLFI-VLLAGCT-VGPEYTKPHMPL---LPTQFSIGNSKNLINIDTLKWWESFNDT 59 RA+ + + V LAGCT + P+Y +P + + LP S L + + W + + Sbjct: 30 RAVLATALGVALAGCTHLAPDYARPALAVPATLPGSESPTAGNALPDAGPMDWQDFLQEP 89 Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNS 116 L +LV +ALQ N + A I A+ +++L+P ++ A R +L + Sbjct: 90 RLRELVALALQNNRDLRVAVLAIEKARAQYGVEQSNLYPAVGATGAGTRTRTAQDLTASG 149 Query: 117 --------TGQLD-SDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + QL S ++IDLFG+ +++ E++L +L++++++ +++ Sbjct: 150 RSPTSSQYSAQLGFSSYEIDLFGRVKNLNEAALQEFLRTTESRRSVQLSLVAEVANAWLT 209 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 R+ +A L +K+ EL+ GA S L+L + + Sbjct: 210 LDADGRRLQLAQDTLRSRQKSYELTQRSHALGAASGLTLAQTQ 252 >gi|257485089|ref|ZP_05639130.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 86 Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 37/51 (72%) Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 P + + IG P ++RNRPDIR E++LA S A+IG+A +DL+P +SL+G Sbjct: 33 PAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARIGVATADLFPRVSLSG 83 >gi|297183330|gb|ADI19466.1| outer membrane protein [uncultured Sphingomonadales bacterium HF0500_24B12] Length = 468 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 87/442 (19%), Positives = 173/442 (39%), Gaps = 29/442 (6%) Query: 3 ILRAIFSLFIVLLAGCTVG--PEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 ++RA+ L LAGC G PE P +P LP + N +L +D + Sbjct: 1 MIRAVPLLAAAALAGCVAGPPPEIATP-VPALPANYLYATPSN--EAGSLAALLPKDDPA 57 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------HRF 108 + L AL + T+ +A RI A+ ++ P+ AS S Sbjct: 58 FDGLTAQALAGSPTLGEALARIEQARGGADRAGSERLPNIGASASVTGQRTNPAQFGTDL 117 Query: 109 IPNLKTNS-----TGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIP 162 P ++ +S L + W D+FG R E ++L +D+A A + +I+++ Sbjct: 118 PPGVEIDSERVGYAANLTARWDPDIFGTLRAQERAALLRVDAASAGAAAVRQALIAEIAA 177 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 S ID R R S L+ + L+ ++ G V+ E++ + S + +L Sbjct: 178 SVIDWRTLAARQSELESDLEAAGELARLAEVRERAGLAPGFDRVRAESQAAASRSRLQSL 237 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + TL + +Q++ P ++L+ NRPD+ Sbjct: 238 SGERARVLGRLVTLTAQGGAQVRATLQQEGPAIPLPPPPPALP---SELLVNRPDVVRAA 294 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGK 339 +L+ + A + +P L+ +I L + F + S + P+ D G+ Sbjct: 295 AELSAADADLAAVARTRFPRFDLSAAIGLLAFGVGDLFEADSVIGSLAASVAAPLLDFGR 354 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 I++ I A ++ + + ++ V A+ + E A + + +++ ++ Sbjct: 355 IEAEIDTAAAAKRAAFEAYRGAVFTALGDAEAAYGLVEAADAEAAASIAERNIAQRAAAI 414 Query: 400 SMINYRQGRYSLLDILDIERAT 421 + + G + L +++ RA Sbjct: 415 ANTRFEAGLANFLAVIEARRAA 436 >gi|167901515|ref|ZP_02488720.1| outer membrane efflux protein OprB [Burkholderia pseudomallei NCTC 13177] Length = 280 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/225 (20%), Positives = 98/225 (43%), Gaps = 30/225 (13%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG---------------NSKNLINIDTLKWWESFNDTSL 61 GCT+ P Y +P P+ + G N + ++I W E F D L Sbjct: 12 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDI---GWREFFVDPRL 68 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIP 110 +L++IAL+ N + + + A++ RA LFP+ + A +S P Sbjct: 69 QRLIEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQP 128 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 + + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 129 LISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYLTLLS 188 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + L + + +L+ L+F G S+L L + + +++ Sbjct: 189 TDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVET 233 >gi|161986504|ref|YP_311081.2| multidrug resistance outer membrane protein MdtQ [Shigella sonnei Ss046] Length = 478 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 188/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLNIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I+ + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIVGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|187730411|ref|YP_001879532.1| multidrug resistance outer membrane protein MdtQ [Shigella boydii CDC 3083-94] gi|187427403|gb|ACD06677.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Shigella boydii CDC 3083-94] Length = 478 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVDGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSITSYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|300948238|ref|ZP_07162359.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 116-1] gi|300452244|gb|EFK15864.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 116-1] Length = 505 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 188/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 87 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W++D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWQLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 258 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 492 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 493 IQLTGALGGGY 503 >gi|225075923|ref|ZP_03719122.1| hypothetical protein NEIFLAOT_00947 [Neisseria flavescens NRL30031/H210] gi|224952638|gb|EEG33847.1| hypothetical protein NEIFLAOT_00947 [Neisseria flavescens NRL30031/H210] Length = 468 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 85/421 (20%), Positives = 163/421 (38%), Gaps = 30/421 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW D LN L+ A+Q + + R A+ + V A P ++ Sbjct: 51 WWMKLKDKKLNNLIASAIQTSTNLRVVKARFEQAQAQLGVVGAANKPQVGLGVTGIGTYV 110 Query: 112 LKTNSTGQLDSDWKI-------------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 G +D+D + D +G+ R I++ L +A + + + Sbjct: 111 SPKPQAGMVDTDHTLVLAHAALQGSLVFDFWGKNREQIQAVLGKSRAAVYEAHHIRTELA 170 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + Y + E++++ ++L K ++L + +L LE + ++ Sbjct: 171 HAVAAQYFAWQMATEQLALLDTRIELADKALKLMQQRVKAQLAPADALHTLEMAQQQLQ- 229 Query: 218 DIPTLEKSFRMN----VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 LEKS + N +L L+ + P+L P++ I ADL+ Sbjct: 230 ----LEKSAWTQKNEKIRNSLAVLTGRVPGALNGQVPEKMAAVPSL--PVSR-IEADLLA 282 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFG--PK 329 RPDI Q+ L + + +++ YP++ L +TH ++F T G P Sbjct: 283 ARPDIAAQKALLEEKWHIVKSTEAEFYPNIELKVLAGMTHIDAFNLIRGRTSGMLGIVPA 342 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LP+F G ++S + + EQ + +TVLNA++ +A+ K Sbjct: 343 LNLPLFTSGALQSKLAGKRAQYNEQVAVYDQTVLNAMRSAADAVVDYQSLKSRQDTWNKM 402 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V + KS+ + R G + L L + A+ ++ + ++ +L +G G Sbjct: 403 VNIADKSVQNAKGRVRAGLDNGLTALQKQDEAARTKMSAVQYHAEYLTAWSNLNAQLGGG 462 Query: 450 Y 450 + Sbjct: 463 F 463 >gi|293415422|ref|ZP_06658065.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B185] gi|291433070|gb|EFF06049.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B185] Length = 478 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|46581500|ref|YP_012308.1| outer membrane efflux protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601333|ref|YP_965733.1| outer membrane efflux protein [Desulfovibrio vulgaris DP4] gi|46450922|gb|AAS97568.1| outer membrane efflux protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561562|gb|ABM27306.1| outer membrane efflux protein [Desulfovibrio vulgaris DP4] gi|311235149|gb|ADP88003.1| outer membrane efflux protein [Desulfovibrio vulgaris RCH1] Length = 439 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 80/417 (19%), Positives = 168/417 (40%), Gaps = 39/417 (9%) Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS 116 +D + V+ AL+ N ++ + +AA+E S R P+ + ++ + Sbjct: 27 DDYDMASAVEKALRDNQGVVSSGAARDAAEEGRKSARGAFGPALSTTYGYKRLDEKPVTF 86 Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAY-----------AQVDIAKLNVISKLIPSYI 165 +LD+D G R+ + + N+ S Y A++ +L + + +++ Sbjct: 87 GRELDNDTYTWTMGVRQPLFTGF-NILSTYQKAALEKDRKEAELSKTRLTLALAVQQAFL 145 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 ++ + A+ L + ++++ + G +L +++ E ++ E+D E + Sbjct: 146 TYLKAQQDVRSANDALVRLRDQLKVTQAFYDVGLRPRLDVLQAEVDLSKAETDFIKAENA 205 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADL---IRNRPDIRYQ 281 ++TLL P + +++F L Y P A L R RPD+ Sbjct: 206 LDTQKARLNTLLALPV--------ETASSFSGTLEYRPFTRPFEACLEQAYRQRPDMHMA 257 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--------SFPGYNTHWSFGPKLYLP 333 K + + IA S YP +S A D+ GY T WS + Sbjct: 258 AKAIEIAGKDTTIASSGYYPQVSAGFDWATQGDHPEASGSTLDRTGY-TQWSTNVTASMN 316 Query: 334 IFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +F+ G+ +++A ES + ++ + EV++ L +I+E K + A+ Sbjct: 317 VFEWGRTYYGVQQAKQIESKVRADEANLRQEI---AYEVKSRLLAISESGKRIVVAHKAL 373 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ +++ Y+ + D+LD + E L+ AK + LY ++G Sbjct: 374 DQAHEAYRMALARYQAQVGTNTDVLDAQAKLTAAEAGLTGAKADYLVALAQLYASLG 430 >gi|298480995|ref|ZP_06999190.1| outer membrane efflux protein [Bacteroides sp. D22] gi|298273018|gb|EFI14584.1| outer membrane efflux protein [Bacteroides sp. D22] Length = 465 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTLK + + L + A +QN+TI + RI A ++ + +A LFPS Sbjct: 30 LQVDTLKETKIPDQWDLQSCIDYAKEQNITIRK--NRITAVSTQIDVKTAKAALFPSLSF 87 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S H+ + N KT+ G L++ W + G +R L Sbjct: 88 STGHQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 147 NNQMAELDVATSENNIQESIAQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K L +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDLAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS +P++SL+ Sbjct: 255 LPALSDENVLAPLPTKRDVYISALSLRPEIEASKLNVEASELGINIAKSSYFPTISLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|290508573|ref|ZP_06547944.1| multidrug resistance outer membrane protein MdtQ [Klebsiella sp. 1_1_55] gi|289777967|gb|EFD85964.1| multidrug resistance outer membrane protein MdtQ [Klebsiella sp. 1_1_55] Length = 479 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 90/446 (20%), Positives = 183/446 (41%), Gaps = 74/446 (16%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D L+ L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDAQLDNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADVERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA 152 +A+ + TN T L + W +DL+G+ R + A + AQV A Sbjct: 118 SAEGLMGPFATDTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVK--ARIGELKAQV--A 173 Query: 153 KLNVISKLIPSYIDARHFKERISIA------------HQILDLYKKNIELSHLKFTQGAT 200 + +L+ + +++ + A + I+ + K ++ +GA Sbjct: 174 EQAQTRELLSGSVARLYWQWQTEAAIKAVLQQVKGEQNNIVTVDKALLQRGITNSAEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--- 257 + +++ K + ++ + + +E M + N Q QS N +P Sbjct: 234 NDINVSKTDQQLADVAGTMKEIEARL-MALTN---------------SQSQSLNLKPVSL 277 Query: 258 ---NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 + +P +G +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PTVSAQLPDTLGY--ELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDAL 335 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F L LPIFD G++ +N+ A + + + V++A+ +V Sbjct: 336 HLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAK 395 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKV-EVDLS 429 + + + ++ K Q ++ K + + +N Q R + IL R + AK+ + Sbjct: 396 TASQV---ETLMAKSQQQQQVEKDAQRV--VNLAQARMA-AGILPGSRVSMAKLPALQER 449 Query: 430 IAKRQLAKSYVDLYI----AIGSGYN 451 I +L ++D I A+G GY+ Sbjct: 450 ITALRLHGQWIDASIQLTSALGGGYH 475 >gi|288934368|ref|YP_003438427.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] gi|288889097|gb|ADC57415.1| RND efflux system, outer membrane lipoprotein, NodT family [Klebsiella variicola At-22] Length = 479 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 90/446 (20%), Positives = 183/446 (41%), Gaps = 74/446 (16%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D L+ L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDAQLDNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADVERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA 152 +A+ + TN T L + W +DL+G+ R + A + AQV A Sbjct: 118 SAEGLMGPFATDTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVK--ARIGELKAQV--A 173 Query: 153 KLNVISKLIPSYIDARHFKERISIA------------HQILDLYKKNIELSHLKFTQGAT 200 + +L+ + +++ + A + I+ + K ++ +GA Sbjct: 174 EQAQTRELLSGSVARLYWQWQTEAAIKAVLQQVKGEQNNIVTVDKALLQRGITNSAEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--- 257 + +++ K + ++ + + +E M + N Q QS N +P Sbjct: 234 NDINVSKTDQQLADVAGTMKEIEARL-MALTN---------------SQSQSLNLKPVSL 277 Query: 258 ---NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 + +P +G +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PMVSAQLPDTLGY--ELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDAL 335 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F L LPIFD G++ +N+ A + + + V++A+ +V Sbjct: 336 HLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAK 395 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKV-EVDLS 429 + + + ++ K Q ++ K + + +N Q R + IL R + AK+ + Sbjct: 396 TASQV---ETLMAKSQQQQQVEKDAQRV--VNLAQARMA-AGILPGSRVSMAKLPALQER 449 Query: 430 IAKRQLAKSYVDLYI----AIGSGYN 451 I +L ++D I A+G GY+ Sbjct: 450 ITALRLHGQWIDASIQLTSALGGGYH 475 >gi|90414573|ref|ZP_01222547.1| hypothetical protein P3TCK_02326 [Photobacterium profundum 3TCK] gi|90324380|gb|EAS40946.1| hypothetical protein P3TCK_02326 [Photobacterium profundum 3TCK] Length = 455 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 93/425 (21%), Positives = 171/425 (40%), Gaps = 40/425 (9%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI- 109 +WW F D L +L+++ L NLT+ QA +RI A + + + P ++S I Sbjct: 31 QWWNQFGDQQLTQLIQLGLTNNLTLQQAKQRIALASQQVALAESGDKPKLNLNVSGGGIG 90 Query: 110 PNLKTNSTGQLDSD----------WKIDLFGQRRHIESSLANLD-SAYAQVDIAKLNVIS 158 N ++ +T D ++ D +G+ ++ ++ S AQ A+L + + Sbjct: 91 ANTQSFNTSNADYSAIGMLLPSFSYQFDFWGKNEATITAASDQKLSLQAQEAQARLVISA 150 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + SY ++ +LD E++H A K L EAE + D Sbjct: 151 SIASSYFALQNNYRLEQNLTTLLD------EINHQNKVITAQVKRGLAS-EAESFQNQGD 203 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INI-----GIPA 269 I TL + + Y+ K + L +P IN IP Sbjct: 204 IDTLSAQLS----DAKAQQQLAKNQLALYLAKTPDQL-GQLTLPNAQAINQLAAVDTIPM 258 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--G 327 +L+ RPDI + + + I AK+ YP ++L + + N F G Sbjct: 259 NLLGRRPDIIASKWMVEANEQGIKQAKAAYYPDVNL---MVMGVFQKLSSMNPASLFLGG 315 Query: 328 PKLY--LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 + LP++D G +N A + + +TVLNA+K+ +A+ S+ E +K Sbjct: 316 ATVAASLPLYDGGVRDANYASANIHFDQAVTNYNQTVLNAVKQTSDAIVSLQEAQKQQVL 375 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Q +V ++++ + Y +G S D+ + V + + + ++ + L +A Sbjct: 376 AQSSVAHYQQAYDILNNRYERGLSSFADMNSARMQWHQQVVKATNTESAILQNQLQLIVA 435 Query: 446 IGSGY 450 +G Y Sbjct: 436 LGGDY 440 >gi|9911117|sp|P33369|MDTQ_ECOLI RecName: Full=Putative multidrug resistance outer membrane protein mdtQ; Flags: Precursor Length = 478 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 93/482 (19%), Positives = 187/482 (38%), Gaps = 53/482 (10%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP---HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLN 62 A F L + +LAGC E + P ++ + ++ T +WW ++D L Sbjct: 11 ACFPLLL-MLAGCAPMHETRQALSQQTPAAQVDTALPTALKMVG-QTXQWWLEYHDNQLT 68 Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFIP 110 L+ ALQ + A +RI A+ +V P S + F Sbjct: 69 SLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFAL 128 Query: 111 N---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 N TN T L + W +D++G+ R + + L + + A+ + + + + Sbjct: 129 NDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSV 188 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y + + ++ QI I + G TS ++ +E+DI Sbjct: 189 ARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDIN 239 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRP 276 + ++N + L Q +S +P + +P +L + R Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRA 299 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLP 333 D++ + S++ I AK+ YP ++L + AL + F L LP Sbjct: 300 DLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLP 359 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K QH ++ Sbjct: 360 IFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIE 416 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGS 448 + +L ++ Q R++ I + A++ + + + Q + + L A+G Sbjct: 417 RD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGG 474 Query: 449 GY 450 GY Sbjct: 475 GY 476 >gi|148265432|ref|YP_001232138.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] gi|146398932|gb|ABQ27565.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] Length = 419 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 103/229 (44%), Gaps = 15/229 (6%) Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 F +G +K+ + + EA + + ++ + E + + ++ +G P+ E S Sbjct: 170 FREGIRAKVDVTRAEANMFAAKTALIRAENNLELARVELANAMGVPSLE-------TSTV 222 Query: 255 FQPNLYI---PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 +P+ I P + + + NR +++ + + A + IA+S P LS S Sbjct: 223 VEPSAAIDTEPERNRVQQEALTNRAELKRLNALKSSAAAGLKIARSGYLPILSGTASAGY 282 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET--VLNAIKEV 369 D FP T W G L +P+F + + E+ AQ + + Q+ L +++V Sbjct: 283 A-DREFPPGGTVWGVGLNLTIPLFS--GFSTVQQEKEAVAQLRAVDAQQNNQRLQVVRDV 339 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E++ + E + + V +++ +L+M Y++G S++++ D + Sbjct: 340 ESSWLGVREATARIASTEKEVAAARENQALAMGRYQEGVGSIIEVTDAQ 388 >gi|332881182|ref|ZP_08448839.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680874|gb|EGJ53814.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 444 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 156/352 (44%), Gaps = 38/352 (10%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTIL-----QATERIN--AAKENIL-----SVRADLF 97 L W SL + A+Q N+++ Q T IN AK+N L S A+L Sbjct: 15 LGVWAQSKQWSLTDCINYAVQHNISVKKTELNQQTAEINLSQAKDNRLPTVSGSASANLN 74 Query: 98 PSSYAS------ISHR-FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD 150 S + +S R F N +++ L K++L I+ S L+ V Sbjct: 75 NGSAINQISNERVSRRTFSNNFGVSASMPLYQGNKLNL-----QIDRSQLLLEQNELYVQ 129 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 AK N+ ++ +Y+ A + E I++A + ++ + KF G+ +KLSL ++E Sbjct: 130 EAKNNITLSVLEAYLQALYSYEGIAVAKNAARSSAEELKQAQTKFANGSIAKLSLAEIET 189 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + E I E + V + LL P ++F + Q +++ IP + A Sbjct: 190 RNANNEYAIIQAENQYAKRVLTLKQLLELPPNSDFAIALDLQEDDYVA--IIPNKDEVFA 247 Query: 270 DLIRNRPDIR-YQ-EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGY--- 320 + P+++ YQ ++K+A+ I IAK+ PS+SL + + N S+ Sbjct: 248 QAKQALPNLKIYQSQQKIAEK--DIKIAKAGALPSVSLQAGVNTGYSNLNSLSYATQLDS 305 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 N + G L +PIF + K K+N++ A+ + Q+ + Q+ + ++E A Sbjct: 306 NFGQTIGASLNIPIFSQNKNKNNVKLAKLTQQQSVLEEQQAEKDLYAKIETA 357 >gi|182412743|ref|YP_001817809.1| outer membrane efflux protein [Opitutus terrae PB90-1] gi|177839957|gb|ACB74209.1| outer membrane efflux protein [Opitutus terrae PB90-1] Length = 435 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 3/258 (1%) Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 ++A + L + + EL+ ++ GA + +++ EA++ + T + R+ ++ Sbjct: 163 AVAAKSLARAEAHRELARVRREAGAVPQADVLRTEADVADARLQVITADSRIRIATGQLN 222 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 T +G PA L + + P+ + RP+I K+ + A + Sbjct: 223 TAMGRPAETPLGIVAELPVETPPDSAALAAAAE--LALARRPEIESAAKRATAARAAVTA 280 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 A++ P L +GS D ++ W G + +PIFD G + R+++ A + Sbjct: 281 ARASRAPKLRADGSFGW-RDTAWVPDTREWQAGLSIDVPIFDAGSRARRVARSQAEAARE 339 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 L EV A + + + + H++S+ L+ YR G + D+ Sbjct: 340 EAAMANRRLQIRDEVWAAGAELERAWAAIAAGEASRRAHEESLRLAQERYRNGAALIADL 399 Query: 415 LDIERATAKVEVDLSIAK 432 LD + A A+ E ++ A+ Sbjct: 400 LDTQAALARAEAGVAEAR 417 >gi|167570189|ref|ZP_02363063.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia oklahomensis C6786] Length = 238 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 19/170 (11%) Query: 292 IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 I +AK+ YP++ SL G +++ N WS GP L LPIF+ G++++ + Sbjct: 13 IDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGV 72 Query: 347 AESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 A + E + +T++ A+K++ + L S++ +K + AV L ++S LS Sbjct: 73 ASAGYDEAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR---AVALTRRSYDLSHTG 129 Query: 404 YRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLYIAIGSG 449 + +G L D +++ A +++ E I +LA ++ L +A+G G Sbjct: 130 FSRG---LTDYVNVLLAQSQLLTAQENQTRIEAARLA-AHASLMVALGGG 175 >gi|320667928|gb|EFX34831.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. LSU-61] Length = 478 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 92/493 (18%), Positives = 190/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIAIDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + + Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 + QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AERNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|189403613|ref|ZP_02796612.2| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4486] gi|189404402|ref|ZP_02789237.2| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4501] gi|13362494|dbj|BAB36448.1| putative channel/filament proteins [Escherichia coli O157:H7 str. Sakai] gi|189359706|gb|EDU78125.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4486] gi|189365737|gb|EDU84153.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4501] gi|209766358|gb|ACI81491.1| putative channel/filament proteins [Escherichia coli] gi|209766360|gb|ACI81492.1| putative channel/filament proteins [Escherichia coli] gi|209766362|gb|ACI81493.1| putative channel/filament proteins [Escherichia coli] gi|209766364|gb|ACI81494.1| putative channel/filament proteins [Escherichia coli] gi|209766366|gb|ACI81495.1| putative channel/filament proteins [Escherichia coli] Length = 505 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 87 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + + Q +S +P + +P Sbjct: 258 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPD 315 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 316 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 375 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 376 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 432 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 433 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 490 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 491 ASIQLTGALGGGY 503 >gi|148530047|gb|ABQ82232.1| inner membrane transport protein of toluene-induced toluene exclusion pump [Gluconacetobacter diazotrophicus PAl 5] Length = 91 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 19/89 (21%) Query: 10 LFIVLLAGCTVGPEYTKPH---------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 L ++++AGCTVGP+Y PH P +P+Q ++ +WW F+D Sbjct: 4 LALIVIAGCTVGPDYVAPHAEAPPQWLGQPGVPSQ----------SVPDERWWAGFHDPQ 53 Query: 61 LNKLVKIALQQNLTILQATERINAAKENI 89 L++L+ AL +N + A +R+ AA++ I Sbjct: 54 LSRLIHEALIRNNDLAAAEKRVEAARDQI 82 >gi|326800805|ref|YP_004318624.1| outer membrane efflux protein [Sphingobacterium sp. 21] gi|326551569|gb|ADZ79954.1| outer membrane efflux protein [Sphingobacterium sp. 21] Length = 436 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/329 (21%), Positives = 138/329 (41%), Gaps = 52/329 (15%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 +K W SL + + A Q N+T+ +A +N++S +A + P AS S Sbjct: 22 IKQW------SLKECLAYAQQHNITLNNLRLAKQSADQNLISAKASVLPDLNASASQ--- 72 Query: 110 PNLKTNSTGQLDSDWKIDLFG--------------------QRRHIESSLANLDSAYAQV 149 N T Q D+ I+L G ++ + + +A+LD + A Sbjct: 73 -NATHYGTAQGDAGKSINLNGSAGLNSSVTLFNGGTLRADIRQSQLAAEMADLDVSEAGN 131 Query: 150 DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 D+ ++I +Y + KE I A ++ + E ++ GA +K L++L+ Sbjct: 132 DL-----YLQIIQAYTNIMLDKETIVYAQDLVQTSQAQTEQMDQQYKAGAAAKKDLIQLQ 186 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ----PNLYIPINI 265 A++ S + + + + + R + + LL P + K F P+L+ I Sbjct: 187 AQLASDQYTLTSAKNAERQDKITLKQLLQLPVDSAFDIV-KADTTFALAAIPSLHEVIQ- 244 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGY 320 D I RP+I+ + +S + AK+ P +SLNG I ++N +F + Sbjct: 245 ----DAINKRPEIKNSLLNIENSKLDLKKAKAGYLPVISLNGGIGTNYNNGTNIGTFRQF 300 Query: 321 --NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N + G +P+F + ++N+ ++ Sbjct: 301 DNNFYQQIGITATIPLFSRKVNQTNVAKS 329 >gi|306814746|ref|ZP_07448908.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli NC101] gi|305852140|gb|EFM52592.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli NC101] Length = 478 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 94/488 (19%), Positives = 187/488 (38%), Gaps = 65/488 (13%) Query: 6 AIFSLFIVLLAGCTVGPEYTKP---HMP------LLPTQFSIGNSKNLINIDTLKWWESF 56 A F L + +LAGC E + P +LPT G + +WW + Sbjct: 11 ACFPLLL-MLAGCATMHETRQALSQQTPAAQVDTVLPTALKNGWPDS-------QWWLEY 62 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASI 104 +D L L+ ALQ + A +RI A+ ++ P S + Sbjct: 63 HDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSAEGL 122 Query: 105 SHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKL 154 F N TN T L + W +D++G+ R + + L + + A+ + + Sbjct: 123 MGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQ 182 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + Y + + ++ QI I + G TS + V+ + Sbjct: 183 LLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASK 242 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL--- 271 + + ++ ++TL + Q +S +P + +P +L Sbjct: 243 TRQQLNDVAGKMKIIEARLNTLTNH---------QTKSLKLKPVALPKVASQLPDELGYS 293 Query: 272 -IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 294 LLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVT 353 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Q Sbjct: 354 AGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAEKNQ 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDL 442 H ++ + +L ++ Q R++ I + AK+ + + + Q + + L Sbjct: 411 HQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEAKIPALRERANGLLLQGQWLDASIQL 468 Query: 443 YIAIGSGY 450 A+G GY Sbjct: 469 TGALGGGY 476 >gi|319639168|ref|ZP_07993920.1| outer membrane multidrug resistance lipoprotein [Neisseria mucosa C102] gi|317399579|gb|EFV80248.1| outer membrane multidrug resistance lipoprotein [Neisseria mucosa C102] Length = 468 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 30/344 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW D LN L+ A+Q + + R A+ + V A P ++ Sbjct: 51 WWMKLKDEKLNNLIASAIQTSTNLRVVKARFEQAQAQLGVVGAANKPQVGLGVTGLGAYV 110 Query: 112 LKTNSTGQLDSDWKI-------------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 G +D+D + D +G+ R I++ L +A + + + Sbjct: 111 SPKPQAGMIDTDHTLVLANAALQGSLVFDFWGKNREQIQAVLGKSRAAVYEAQHVRTELA 170 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + Y + E++++ ++L K ++L + +L LE + ++ Sbjct: 171 HAVAAQYFAWQMATEQLALLDTRIELADKALKLMQQRVKAQLAPADALHALEMAQQQLQ- 229 Query: 218 DIPTLEKSFRMN----VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 LEKS + N +L L+ + P+L P++ I ADL+ Sbjct: 230 ----LEKSAWTQKNEKIRNSLAVLTGRVPGALNGQVPEKMAAVPSL--PVSR-IEADLLA 282 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFG--PK 329 RPDI Q+ L + + +++ YP++ L +TH ++F T G P Sbjct: 283 ARPDIAAQKALLEEKWHIVKSTEAEFYPNIELKVLAGMTHIDAFNLIRGRTSGMLGIVPA 342 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 L LP+F G ++S + + EQ + +TVLNA++ +A+ Sbjct: 343 LNLPLFTSGALQSKLAGKRAQYNEQVAVYDQTVLNAMRSAADAV 386 >gi|157161620|ref|YP_001458938.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli HS] gi|157067300|gb|ABV06555.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli HS] Length = 478 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 188/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W++D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWQLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|260886188|ref|ZP_05736710.2| putative outer membrane efflux protein [Prevotella tannerae ATCC 51259] gi|260850422|gb|EEX70291.1| putative outer membrane efflux protein [Prevotella tannerae ATCC 51259] Length = 476 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/300 (20%), Positives = 131/300 (43%), Gaps = 28/300 (9%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK------FT 196 D A Q+ + + N+I + +Y ++ +A D+ L+HL Sbjct: 165 DVANQQLRVDEQNLILETDRAYWQMVSLANKLKLARSYRDM------LTHLDQDVTKMID 218 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G +K + +++ ++ + + +E ++ + L G P E + + +N + Sbjct: 219 AGVATKANQLQVSVKLNEADMMVTKVEDGLTLSRMLLCQLCGLPLDENIEAADENKDNLE 278 Query: 257 PNLYIPINIGIPAD---LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + + + AD NRP++ + + + K+ I +SD P L+L G + + Sbjct: 279 VDETV-----VQADEQTAYENRPELCQLQSAINIAQEKVNIVRSDYLPHLALMGGYTVMN 333 Query: 314 DNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ-ETVLNAIK- 367 + G+ WS G L +P+++ G+ + I+ A+ A+EQ T + E V I Sbjct: 334 PAMYNGFEKKFRGDWSVGVTLSVPVWNWGEGRYKIKAAK--AEEQIATLRAEEVREKIGL 391 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 +V + +NE K + + +E +++ ++ + Y++G + D+L E A + + D Sbjct: 392 QVNQEMFRVNEINKQLRLAEKNLEKANENLRVATLGYKEGVINTTDVLAAETAWLQAQSD 451 >gi|332753312|gb|EGJ83693.1| multidrug resistance outer membrane protein mdtP [Shigella flexneri 2747-71] Length = 358 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/331 (19%), Positives = 136/331 (41%), Gaps = 44/331 (13%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 70 ---------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPN 111 Q +L A ++ A +L+ V A+ F S YA + P Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PA 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRY 280 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 255 QITETRESLRALIGAGASDM--------PEIKPVALPRVQTGIPATLSYELLARRPDLQA 306 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + S+ ++ A++ YPS + L Sbjct: 307 MRWYVQASLDQVDSARALFYPSFDIKAFFGL 337 >gi|323187850|gb|EFZ73146.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli RN587/1] Length = 478 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTCGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R+++ I + A++ + + + Q + Sbjct: 408 KNQHQSQIERD--ALRVVGLAQARFNVGLIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|227539293|ref|ZP_03969342.1| possible RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227240975|gb|EEI90990.1| possible RND efflux system outer membrane lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 239 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/224 (21%), Positives = 101/224 (45%), Gaps = 33/224 (14%) Query: 11 FIVLLAGC-----TVGPEYTKPHMPLLPTQFSIGNSKNLI-NIDTLKWWESFNDTSLNKL 64 F ++LAGC T+ + K ++PL F G ++ + N T W + F D +L L Sbjct: 18 FALMLAGCKAPKATIVKDEVKENIPL---NFQSGEQQDTVQNSGTTPWRQFFTDPNLVAL 74 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS------------------- 105 ++ AL+ N +L + I AK +L L P+ A + Sbjct: 75 IETALKNNQELLITLQEIEIAKSGVLYKNGKLSPTVAAKLGAGVSKAGRYTSEGAGDATT 134 Query: 106 ----HRFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKL 160 + +P+ N G L ++W++D++ + R ++++A+ + + N+I ++ Sbjct: 135 EIEPGKEMPDPLGNFEGGLVANWEVDIWKKLRTEKQAAIAHYLATVEGKNFVLSNLIEEV 194 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 +Y + ++ I Q + L ++ +E+S ++ AT++L+ Sbjct: 195 ADNYYELLALDNQLDIVQQYIKLQERALEISKIQKEAAATTELA 238 >gi|71278472|ref|YP_270832.1| outer membrane channel protein [Colwellia psychrerythraea 34H] gi|71144212|gb|AAZ24685.1| outer membrane protein TolC [Colwellia psychrerythraea 34H] Length = 449 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 174/411 (42%), Gaps = 68/411 (16%) Query: 68 ALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKTNSTGQLDS 122 AL + +L++ + KE+I+ R+ L P Y+ F+ T+ Q +S Sbjct: 33 ALLNDPVVLKSQAQFMIVKEDIVQARSALLPQISANGGYSIGEQEFVGTDNTSIINQ-ES 91 Query: 123 D---WKIDLFGQRRHIES--SLANLDSAYAQVD----IAKLNVISKLIPSYIDARHFKER 173 D + L Q H +S L N + A Q D +AK ++I+++ +Y D K+ Sbjct: 92 DSLTYGASLNMQLYHHDSWLRLNNAEKAAHQSDLTYQVAKQDLITRVAKAYFDLLSTKDD 151 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + A D + +E + +F+ G T+ + + +A+ S ++ E + Sbjct: 152 LVFATAEKDAIARQLEQTKQRFSVGLTAITDVYEAQAQFDSAVTEEIRAENAI------- 204 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSV 289 + A E L + +N++ N+ + + P + + + K L Sbjct: 205 -----FQAEEELRVI---TNSYPKNVSVLNTQRFSTSTPVPNSADEWQVTAEAKNLDLIT 256 Query: 290 AKIGI---------AKSDLYPSLSL----NG-----SIALTHDNSFPGYNTHWSFGPKLY 331 AK+GI A++ YP+L NG +I PG N +S G +L Sbjct: 257 AKVGIDIAQDNIDIARAGHYPTLDFGANYNGKDEEQTIGSAASADLPGVN-GYSIGVQLN 315 Query: 332 LPIFDKGKIKSNIRRAESS----AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +PI+ G I+S++R+A++S +Q+ +T + V + NA ++ + + Sbjct: 316 VPIYSGGAIQSSVRKAQNSFVFASQDLSLTHRSVV----RTTRNAYNTVIAAISAIKAFE 371 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 +V +K++ + + G +++D+LD R +L AKR L+ + Sbjct: 372 QSVLSAQKALEATEAGFEVGTRTIVDVLDSTR-------NLYNAKRNLSST 415 >gi|95930807|ref|ZP_01313539.1| Type I secretion outer membrane protein, TolC [Desulfuromonas acetoxidans DSM 684] gi|95133155|gb|EAT14822.1| Type I secretion outer membrane protein, TolC [Desulfuromonas acetoxidans DSM 684] Length = 454 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/317 (20%), Positives = 140/317 (44%), Gaps = 25/317 (7%) Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A A+ +A+ +I+++ Y+DA ++++ + +K+ EL+ + G Sbjct: 135 AEAEYLVAQQELITRVAGLYLDALSARDQLHYVETEMAAVEKHYELASGRHQMGLIPVTD 194 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 L +A + +I + + + +S + G T+ N+ Q + IP+ Sbjct: 195 LHDAKARLATIRAKAIEAQNQLDDALQALSEVTGTTITDL--------NDLQAS--IPLV 244 Query: 265 IGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDN 315 PAD+ + P I + + + ++ + YP+L L GS + T D+ Sbjct: 245 SPEPADVATWTESGLEQNPTIVLHQHAVEAARREVSRQRGGHYPTLDLIGSYSDEDTDDS 304 Query: 316 SFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRA--ESSAQEQYITWQETVLNAIKEVEN 371 F G + + +L +P++ G+I S +R++ E S EQ +T Q+ + ++V Sbjct: 305 LFGGGSEVENLDITLELNVPLYQGGEISSRVRQSQHELSYAEQELTRQQRTVT--RQVRA 362 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A + V LQ ++ ++ ++ + G Y+ L++LD ER + V +D + A Sbjct: 363 AYLGVQTSLSRVEALQQSIVSNQLALEAKQEGFMSGLYTSLNVLDAERDLSLVSIDYARA 422 Query: 432 KRQLAKSYVDLYIAIGS 448 + + + L A+G+ Sbjct: 423 RYDYILNSLKLRQAVGT 439 >gi|331642762|ref|ZP_08343897.1| putative channel/filament protein [Escherichia coli H736] gi|331039560|gb|EGI11780.1| putative channel/filament protein [Escherichia coli H736] Length = 542 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 75 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 123 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 124 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 183 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 184 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 243 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 244 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 294 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 295 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 354 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 355 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 414 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 415 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 471 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 472 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 529 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 530 IQLTGALGGGY 540 >gi|38704057|ref|NP_311052.2| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. Sakai] gi|168750511|ref|ZP_02775533.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4113] gi|168757713|ref|ZP_02782720.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4401] gi|168777283|ref|ZP_02802290.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4196] gi|168783709|ref|ZP_02808716.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4076] gi|168788941|ref|ZP_02813948.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC869] gi|168801180|ref|ZP_02826187.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC508] gi|195935509|ref|ZP_03080891.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. EC4024] gi|208808646|ref|ZP_03250983.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4206] gi|208812061|ref|ZP_03253390.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4045] gi|208818425|ref|ZP_03258745.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4042] gi|209398358|ref|YP_002271542.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4115] gi|217327083|ref|ZP_03443166.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. TW14588] gi|254794031|ref|YP_003078868.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. TW14359] gi|261223408|ref|ZP_05937689.1| putative outer membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259042|ref|ZP_05951575.1| putative outer membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291283386|ref|YP_003500204.1| Multidrug resistance outer membrane protein mdtQ precursor [Escherichia coli O55:H7 str. CB9615] gi|73621214|sp|Q8X659|MDTQ_ECO57 RecName: Full=Multidrug resistance outer membrane protein mdtQ; Flags: Precursor gi|187767427|gb|EDU31271.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4196] gi|188015344|gb|EDU53466.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4113] gi|188998989|gb|EDU67975.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4076] gi|189355334|gb|EDU73753.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4401] gi|189371325|gb|EDU89741.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC869] gi|189376633|gb|EDU95049.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC508] gi|208728447|gb|EDZ78048.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4206] gi|208733338|gb|EDZ82025.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4045] gi|208738548|gb|EDZ86230.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4042] gi|209159758|gb|ACI37191.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. EC4115] gi|217319450|gb|EEC27875.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli O157:H7 str. TW14588] gi|254593431|gb|ACT72792.1| putative outer membrane protein [Escherichia coli O157:H7 str. TW14359] gi|290763259|gb|ADD57220.1| Multidrug resistance outer membrane protein mdtQ precursor [Escherichia coli O55:H7 str. CB9615] gi|320192244|gb|EFW66889.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. EC1212] gi|320641204|gb|EFX10682.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. G5101] gi|320646592|gb|EFX15503.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H- str. 493-89] gi|320651847|gb|EFX20222.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H- str. H 2687] gi|320663177|gb|EFX30486.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O55:H7 str. USDA 5905] gi|326339483|gb|EGD63294.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. 1125] gi|326343944|gb|EGD67705.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli O157:H7 str. 1044] Length = 478 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + + Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|261247386|emb|CBG25211.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 478 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/505 (18%), Positives = 197/505 (39%), Gaps = 87/505 (17%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAK---LNVISKLIPSYIDARHFKERI-SIAHQILDLYKKNIELSHLKFT---QGA 199 A+ + + + +++L + K + I H+ ++ N EL T +G Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGV 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNN 254 + + K + ++ + + +E + S L PA E Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES---------- 284 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P +G L+ R D++ + S++ I AK+ YP ++L + AL Sbjct: 285 -----QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + L LPIFD ++ +N+ A++ + + + V++A+ +V Sbjct: 338 HLSDLFRHSAQQYGITGGLTLPIFDSSRLNANLDIAKAQSNLSIANYNKAVVDAVNDVAR 397 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EV 426 A + + + + K QH ++ + + + Q R++ I + AK+ + Sbjct: 398 AASQV---ETLAQKNQHQQQIEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQC 452 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + Q + + L A+G GY+ Sbjct: 453 NGLLLQGQWLDASIQLTSALGGGYH 477 >gi|332295962|ref|YP_004437885.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] gi|332179065|gb|AEE14754.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] Length = 456 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/376 (22%), Positives = 172/376 (45%), Gaps = 33/376 (8%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG- 118 +L +KIA + N T+ ++ +AKE + P+ S+S+ I + TN+ Sbjct: 51 TLEDALKIAKENNKTLQAQYYQMQSAKETYIQALGYRLPNITGSLSYERIRAMSTNNASY 110 Query: 119 --------QLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARH 169 LD++ + FG +I+S+ +Y Q + L+ + ++ Y + Sbjct: 111 GSKDNFSYSLDANQLLYDFGATNSYIQSAY----HSYKQSEKQYLDTLRQI--EYQVKQS 164 Query: 170 FKERISIAHQILDLYKKNIELSHL--KFTQ-----GATSKLSLVKLEAEIKSIESDIPTL 222 + +S A Q+ D K+ ++L++L K+TQ G ++ ++ E E+++ + + Sbjct: 165 YLNVLS-AEQLYDTAKEGLDLANLILKYTQSEFDVGLVARSDVLSAEVEVQNAKISLLNA 223 Query: 223 EKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG--IPADLIRNRPDIR 279 + +++ N++ +LGY P F + K + P I N I + I+NRPDI Sbjct: 224 KNQINVSLANLANVLGYDPRKSFT--ISKTAYETPPKA-IASNFADQIFSIAIKNRPDIA 280 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + + + + KS LYP ++L G + + D FP N W +G + ++ G+ Sbjct: 281 AAIEGIDAARYTLKNLKSSLYPKINLVGDYSRS-DTKFPPENYSWFYGITATITFYNGGQ 339 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMS 398 S IR+ E I ++ + ++IK V + ++N AV+ +++ Sbjct: 340 NLSKIRQ-EQDILNSLIKTKDNLEDSIKLAVWTDILNLNNAYSTFELSDAAVKSALENLR 398 Query: 399 LSMINYRQGRYSLLDI 414 ++ YR+G S++D+ Sbjct: 399 VNEAQYREGLNSIIDL 414 >gi|323168722|gb|EFZ54402.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Shigella sonnei 53G] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLNIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|295084454|emb|CBK65977.1| Outer membrane protein [Bacteroides xylanisolvens XB1A] Length = 465 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 142/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPS--- 99 + +DTLK + + L + A +QN+TI + RI AA ++ + +A LFPS Sbjct: 30 LQVDTLKETKIPDQWDLQSCIDYAKEQNITIRK--NRITAASTQIDVKTAKAALFPSLSF 87 Query: 100 ---------------SYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S S N KT+ G L++ W + G +R L Sbjct: 88 STGQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 147 NNQMAELDVATSENNIQESITQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K L +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDLAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS +P++SL+ Sbjct: 255 LPALSDENVLAPLPTKRDVYISALSLRPEIEASKLNVEASELGINIAKSSYFPTISLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVQKAK 361 >gi|116624957|ref|YP_827113.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] gi|116228119|gb|ABJ86828.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] Length = 454 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 77/391 (19%), Positives = 157/391 (40%), Gaps = 65/391 (16%) Query: 93 RADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDL----------FGQRR-HIESSLAN 141 ++ LFPS IS P L+TNS ++S W + FG R+ ++E + A+ Sbjct: 83 QSGLFPS----ISG---PVLRTNS---MESVWGTAVGVLVQWEPFDFGLRKANVEVAQAS 132 Query: 142 LDSAYAQVDIAKLNVISKLIPSYID----------ARHFKERISIAHQILDLYKKNIELS 191 A AQV + +L ++ SY+ A ER + QI+ + +N Sbjct: 133 RSRAQAQVAVTRLEAVAAAADSYLTIVAAQQTVTAATAAVERARVLDQIVGVLVRN---- 188 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 + GA + + AE E+ + E++ + ++ +LG P Sbjct: 189 --ELRPGAEAS----RARAEFAVAETQLIQSEEAVEIARAALAQVLGVPPATI------- 235 Query: 252 SNNFQPNLYI---PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 P + P + G+P P I Q +A+ A+ YP +L S Sbjct: 236 --QVAPGRLLDLPPESAGMPETPPAAHPVIAAQTTAVAEVQAREKALDRAWYPRFNLEAS 293 Query: 309 -----IALTHDNSFPGYNT-------HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 + D S G+ + +W+ G + P+ + + + + + + + Sbjct: 294 EYARGTGVQPDGSTGGFASGLGPNIQNWAVGMTVTFPLAELPSLHARQQIERARERAERA 353 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 + + V N E+ A ++ +++ + +E +++ + YR G +L+++ + Sbjct: 354 RYDQLVQNFNGEIARARAVLSGARRVAANVPVQLEAAREAEQQATARYRAGLGTLVEVAE 413 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +R + E+D S+A+ + ++ + L IA G Sbjct: 414 AQRLHTQAEIDSSLARLNVWRALLALAIAQG 444 >gi|320657571|gb|EFX25369.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEARAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + + Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|260885866|ref|ZP_05736027.2| putative outer membrane transport/efflux protein [Prevotella tannerae ATCC 51259] gi|260851334|gb|EEX71203.1| putative outer membrane transport/efflux protein [Prevotella tannerae ATCC 51259] Length = 438 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 35/265 (13%) Query: 128 LFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 L QR+ E NL +A A ++ + ++ ++ +Y+ + KE + A L L N Sbjct: 110 LVNQRKQAE---LNLSAAVADLERLRESLSIQVTQAYLQVLYQKELVKTAQDQLAL--SN 164 Query: 188 IELSHLK--FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 ++L +K + S L + + + + E + + ++R+ + ++S L+ P+ + L Sbjct: 165 VQLERVKAFYENKKASGLEVTQAQNTVAQDELQLVENQNAYRLALLDLSQLIEMPSPDSL 224 Query: 246 HYMQKQSNNFQPNLYIPINIGIPAD--------LIRNRPDIRYQEKKLADSVAKIGIAKS 297 N P L IP P+D + +P+I Q+ ++ + I IA++ Sbjct: 225 -------NVAVPPLQIPQR---PSDGPQQIFDEAVAAKPEIVAQQFRIQSAEKGIEIARA 274 Query: 298 DLYPSLSLNGSIALTH--DNSFPGY--------NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +P+L+L+G++ ++ N G N S G L +P+FD ++NIRRA Sbjct: 275 GYWPTLNLSGNLGSSYYKVNGLSGTSFSKQMRDNFSKSIGLSLNIPVFDHFTTRTNIRRA 334 Query: 348 ESSAQEQYITWQETVLNAIKEVENA 372 + + + Q Q T KE++ A Sbjct: 335 KLNYETQQEQLQNTRKALYKEIQTA 359 >gi|261885171|ref|ZP_06009210.1| outer membrane efflux protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 364 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 77/371 (20%), Positives = 168/371 (45%), Gaps = 29/371 (7%) Query: 92 VRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKIDLFGQ-RRHIESSLANLDS 144 +R D FP+ ++KT+S + + +++D++G+ + E+ + Sbjct: 7 IRDDFFPTPSGKFGASTNKDIKTSSGWKNGFSSEFALSYEVDIYGKIFDNYEARDWEAKA 66 Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 + + ++ +L +I+ + +Y + + + I Q L+ L K+ G LS Sbjct: 67 SQSTLENLRLTIINSVTDTYFNILYLNDAIRNLKQNLENLNMLDRLVFTKYELGKEEILS 126 Query: 205 LVKLEAEIKSIE----SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + + I ++ S+I LE S+ + + N + + + + +N Q + Sbjct: 127 VRQSRQNILDLQNQILSNIRELETSYEI-IKNFTR-------SDIKFDELSLSNVQNS-- 176 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-- 318 I++ I +++NRPDI L+ S + +++ +LYPS+S+ GS++ + Sbjct: 177 -DISLDIDFAILKNRPDINEVISNLSASFSDYKVSEKNLYPSVSIGGSLSDSDSKFSDSF 235 Query: 319 GYNTHWSFGPKLY--LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 G+N G L LP D ++K I +E+ ++ +T+++T+ NA+ EV + Sbjct: 236 GFNI---LGGTLNINLPFLDYSRLKKQINISEAQFKKNVLTYEKTLSNAVNEVIKYVNYY 292 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA 436 DK+ +Q+ + + +++ Y +G+ L D+L+ + + V+ L K +L Sbjct: 293 EGDKQRYENMQNIKKEREMIVAIYESKYSEGKAELKDLLEAKNSLISVQNMLLNQKYRLL 352 Query: 437 KSYVDLYIAIG 447 + Y AI Sbjct: 353 NDELSYYKAIA 363 >gi|114763427|ref|ZP_01442834.1| type I secretion outer membrane protein, TolC family [Pelagibaca bermudensis HTCC2601] gi|114543965|gb|EAU46976.1| type I secretion outer membrane protein, TolC family [Roseovarius sp. HTCC2601] Length = 468 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 48/295 (16%) Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + ++++ R E + + + + + + + +F G ++ + EA + S + Sbjct: 143 VSAFMEVRRALETVQLRRNNVRVIGEELRAAQDRFQVGEVTRTDVAAAEARLAGARSLLA 202 Query: 221 TLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPAD-------LI 272 E + +N + ++G YP N QP + +P +PAD + Sbjct: 203 AAEGTLAVNREVYNAVVGRYP------------ENPQPPVGLPR---LPADPATAKAQAL 247 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKL 330 R PDI +A S I IAK+ + P+++L G + + T D+ F + G L Sbjct: 248 REHPDIVQLRHVVAGSDIAIAIAKARMKPTVNLEGRLGMSGTFDSPFASERGSVTLG--L 305 Query: 331 YLPIFDKGKIKSNIRRA----ESSAQEQYITWQ---ETVLNAIKEVENALTSINEDKKIV 383 PI+ G + S +R+A ++S + Y Q ++V +A ++ A SI ++ V Sbjct: 306 SGPIYQGGGLSSGVRQAMANRDASRAQLYTAGQQVEQSVGSAFAQLRIAQASIVSTREQV 365 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER-------ATAKVEVDLSIA 431 + A E ++ SL G + LD+LD E+ A EVD +IA Sbjct: 366 RAARVAFEGIREEASL-------GARTTLDVLDAEQELLDARAAQISAEVDQTIA 413 >gi|300929314|ref|ZP_07144788.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 187-1] gi|301644156|ref|ZP_07244164.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 146-1] gi|300462733|gb|EFK26226.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 187-1] gi|301077454|gb|EFK92260.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 146-1] Length = 505 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 87 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 258 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 492 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 493 IQLTGALGGGY 503 >gi|39997758|ref|NP_953709.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] gi|39984650|gb|AAR36036.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] gi|298506693|gb|ADI85416.1| efflux pump, RND family, inner and outer membrane proteins [Geobacter sulfurreducens KN400] Length = 1496 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 67/404 (16%), Positives = 170/404 (42%), Gaps = 21/404 (5%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISH 106 +L++ + +A ++N I +A E + + R+ P S +++ Sbjct: 1086 TLDQALAMADERNRDIAKAREFFRQVEGRYVEERSAALPQFTITGSASWLDDRSQKALAG 1145 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 FIP + ++ + +G+ I ++ +A Q+ A+ + + ++ Sbjct: 1146 GFIPTRQDVRAAGVELSQALYTWGKVSAAIRAADLGFRTADEQLRTARQDARRDVAVAFY 1205 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D +E+++I+ Q L+ +++++ + K+ G + ++ +++ ++ E Sbjct: 1206 DILLAREQLAISRQNLEQKERHLDEAQRKYAAGVATDYDVLAAGVSVENARPEVIRAENL 1265 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 R+ + L + + +F+P +P + A R RP++ +++ Sbjct: 1266 TRLATDRLRYFLALDQ----EIEVEGALSFEPAT-VPSHAEALAVARRQRPELEELRRRI 1320 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN--THWSFGPKLYLPIFDKGKIKSN 343 + + +A ++ P L L + G W+ G L P+FD K + Sbjct: 1321 DMAGELVAVADAEDKPRLDLKAGYGWRQLETGDGRGDGAAWNVGLYLSFPVFDGLKARGK 1380 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + +AES + I + + + E+ +A+ ++ E ++IV+ L+ V ++ ++++ Sbjct: 1381 VAQAESERRSLRIEEAKLMDSVSLEIRDAVNNVREAREIVSALEGTVAQAERLLTMAEQG 1440 Query: 404 YRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G L++ D E + +L+ A+R + V+L +G Sbjct: 1441 FELGVKIRLEVDDAELNLRQARGNLAKARRDYLVARVNLERVMG 1484 >gi|299136159|ref|ZP_07029343.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] gi|298602283|gb|EFI58437.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] Length = 484 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 103/486 (21%), Positives = 209/486 (43%), Gaps = 59/486 (12%) Query: 2 NILRAIFSLFIVLLAGCTVGPE---YTKPHMPLLPTQFSIGNSKNLINIDTLKWWE--SF 56 N+L++ + +++L C+V P+ P++P P Q S K + T E + Sbjct: 6 NVLKSSLTWPLLIL--CSVAPQAWSQRAPNLPDAPWQPSATVMKKYVPTVTHGEAELDAT 63 Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIPNLKT 114 + +L +L+ IA N T +A A+ + +++L+P+ ++A+ + P L Sbjct: 64 DAYTLGQLIDIAESNNPTTKEAWNHAKASAAAVGIAKSELYPTLFAFATGKNYNTPPLLY 123 Query: 115 NS---------TGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N+ + D+ + FG RR I ++ A L +A + A L +I ++ +Y Sbjct: 124 NAFVVQDIGLFATAVHLDYTLVDFGARRSEITATQAKLVAANLSFNDAHLQLIQQVSQAY 183 Query: 165 ---IDARHFKERISIAH---QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++A + + + + LD E + + G + L++ AE + D Sbjct: 184 YALLNASGLRAAAEVNYSDAEALD------EAAQERRNNGLATLPDLLEAHAEKEKANYD 237 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP------INIGIPADLI 272 + + + + +++T + A + H + Q + +L+IP + I A Sbjct: 238 LQSAIGAEKTAFGDLATAI---AAQPTHSFKVQELD---DLHIPDALDQSVEDAI-ASAY 290 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNSFPGYNTH---WS 325 + RPD+ + K+ + A++ S +P+LS G A + +PG + Sbjct: 291 QQRPDLLAERAKVKAAHAEVTHTTSAYFPTLSFEGEGGWVRAWGQQDPYPGTYAQTRTYE 350 Query: 326 FGPKLYLPIFDKGKIKSNIR--RAESSAQEQYITWQETVL--NAIKEVENALTSINEDKK 381 G L IFD + ++ I +AE +A + E + + E+A+T++ + K Sbjct: 351 AGLSLKWTIFDGLRRENRISQAKAEEAAARNVVHEHEDQIADHVWTSYEDAVTALEQRKA 410 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 L + E H S ++ +Y+ G +LLD+L+ ER A+ A+ ++ +S+ Sbjct: 411 AAALLTASTESH----SAAVESYKDGVRNLLDVLNAERDLARARALDVTARTRVLQSFTS 466 Query: 442 LYIAIG 447 L G Sbjct: 467 LAFRTG 472 >gi|312973612|ref|ZP_07787784.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 1827-70] gi|310332207|gb|EFP99442.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli 1827-70] Length = 478 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLTLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|167589406|ref|ZP_02381794.1| type I secretion outer membrane protein, TolC family [Burkholderia ubonensis Bu] Length = 448 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 74/374 (19%), Positives = 154/374 (41%), Gaps = 23/374 (6%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 SL + V+ A++ N +L T AA + + RA +P A+I +++T Sbjct: 19 SLQEAVEQAIRTNPEVLATTHNREAADQGLKQARAGYWPRVDVDAAIGKERRDDVETRLL 78 Query: 118 GQLDSDWK------------IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 GQ + + D F R + A +DS+ +V +V +++ +Y+ Sbjct: 79 GQNRATFTQRNANVTLSQMLFDGFAVRSEVARQQARIDSSANRVASTSEDVALRVVGAYL 138 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + +E + A LD +++ +L L+ +G + L + E+ + + ++ + + S Sbjct: 139 EVLRRRETTAAAEDNLDSHRRIHDLIKLRSDRGVGRRADLYQAESRLALAQDNLRSEQSS 198 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 + + L+G + + + P + ++ + N P + E + Sbjct: 199 LKDAEVAYARLVGTAPDALVKPVVPE-GALPPTERLALDTALA-----NHPSLAGAEADV 252 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 A + A+ AK+ L+P L L ++ +HD + G +L +F G K+ I Sbjct: 253 AQARARYDGAKAALWPRLDLE--LSASHDRDGVLGPTNDRRVMLRLRYNLFQGGADKARI 310 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 A + +E T L + V +A + + + L+ V+ + M+ + Sbjct: 311 GEAHAQIREAEEERNRTRLEIQESVSHAYNAYLTARDRMVVLKQYVDSSAATREAYMLQF 370 Query: 405 RQGRYSLLDILDIE 418 G+ SLLD+L+ E Sbjct: 371 GIGQRSLLDLLNAE 384 >gi|262042890|ref|ZP_06016035.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039730|gb|EEW40856.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 695 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 65/123 (52%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS G + P+ ++ + + + + + + ++++TV +A KEV ++L +I+ + + Sbjct: 563 WSLGGSILAPLLNRQALNAQVDVSMAQRNQALYSYEKTVRSAFKEVNDSLDAISRYGEQL 622 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 T+LQ + +++ + YR G S LD+LD +R ++ + K L + +DLY Sbjct: 623 TELQEQETVAHETLRIVQNRYRNGYSSYLDVLDAQRTLFSTQLSVVQVKNNLLLAQIDLY 682 Query: 444 IAI 446 A+ Sbjct: 683 RAL 685 >gi|167738889|ref|ZP_02411663.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei 14] Length = 248 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 20/178 (11%) Query: 285 LADSVAK-IGIAKSDLYPSL----SLNG-SIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + D+ A+ I +AK+ YP++ SL G +++ N WS GP L LPIF+ G Sbjct: 6 MVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGG 65 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVEN---ALTSINEDKKIVTKLQHAVELHKK 395 ++++ + A + + + +T++ A+K++ + L S++ +K + AV L ++ Sbjct: 66 RLRAQLGVASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAAR---AVSLTRR 122 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKV----EVDLSIAKRQLAKSYVDLYIAIGSG 449 S LS + +G L D +++ A +++ E I +LA ++ L +A+G G Sbjct: 123 SYDLSHAGFSRG---LTDYVNVLIAQSQLLTAQENQTRIEAARLA-AHASLMVALGGG 176 >gi|91072999|gb|ABE07880.1| putative channel/filament proteins [Escherichia coli UTI89] Length = 508 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT+ +WW Sbjct: 41 ACFPLLL-MLAGCA----------PMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWW 89 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 90 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 149 Query: 102 ASISHRFIPNLK---------TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 150 EGLMGPFALNYPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 209 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 210 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 260 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 261 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 318 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 319 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 378 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 379 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 435 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 436 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 493 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 494 ASIQLTGALGGGY 506 >gi|42522293|ref|NP_967673.1| FusA/NodT family protein [Bdellovibrio bacteriovorus HD100] gi|39574824|emb|CAE78666.1| FusA/NodT family protein [Bdellovibrio bacteriovorus HD100] Length = 426 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/367 (19%), Positives = 150/367 (40%), Gaps = 12/367 (3%) Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG---QLDSDWKI-D 127 N ++ A + +++A+ N+ + ++ P A++ ++ + S G L++ + + Sbjct: 48 NAELVAAEQSLDSARYNLNAAYSNYLPQISANLGYQKGETDQVESEGYTATLNATQNVFN 107 Query: 128 LFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 F + + L A A + K + L ++ + + +E + + I N Sbjct: 108 GFSDMAKVSENEGKLKVAEASLRTVKAKISYDLKSAFANVIYAQESLKLTKSIQKRRADN 167 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLH 246 + + L+F G +K S++ +A +K + D+ E F + ++ + G P EF Sbjct: 168 LNMVELRFQSGRENKGSVLLSKAYLKQAQLDVLKAENFFNTSRSSLIRVTGLSPDAEF-- 225 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 +Q ++ P P A L P+ + + ++ + A + ++S+ PSL L+ Sbjct: 226 EVQGRAPESNPPSVTPS----FAKLAEQTPERQQAQGQIQSAEAGLSSSRSEFLPSLDLS 281 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 GS+ T ++ +P + WS G L +F GK + A + TW+ + L I Sbjct: 282 GSVGNTGESWYPDRD-RWSVGATLSWSLFSGGKDYFTNKSAFAQKLVAENTWKNSELEII 340 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 ++ A E + V VE + Y G + D IE + Sbjct: 341 VKLRQAFAEFTEAVEQVKVSDAFVEAGSVRAEIGRSKYNNGLTTFDDWDKIENDLISYQK 400 Query: 427 DLSIAKR 433 D ++ +R Sbjct: 401 DQTLKRR 407 >gi|94152384|ref|YP_581791.1| cation proton antiporter efflux protein CzcC [Cupriavidus metallidurans CH34] gi|110282956|sp|P13509|CZCC_RALME RecName: Full=Cobalt-zinc-cadmium resistance protein CzcC; AltName: Full=Cation efflux system protein CzcC; Flags: Precursor gi|93358754|gb|ABF12841.1| CzcC, outer membrane protein, three components cation proton antiporter efflux system involved in Cd(II), Zn(II), Co(II) resistance [Cupriavidus metallidurans CH34] Length = 418 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 85/410 (20%), Positives = 169/410 (41%), Gaps = 55/410 (13%) Query: 31 LLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENIL 90 L F++ S ++ + E+ +L + +A N + A + +++ + I+ Sbjct: 14 FLSPNFAVAQSDTGTSMVPVFPREAAGPLTLEAALSLAAGSNFNLSAAAKELDSTEGGIM 73 Query: 91 SVRADLFPSSYASISHRFIPNLKT----------NSTGQLDSDWKIDLFGQRR-HIESSL 139 R + P+ P LKT ST Q++ I+L G+R I ++ Sbjct: 74 QAR--VIPN----------PELKTLVEDTRKSTRTSTAQMN--IPIELGGKRSARINAAE 119 Query: 140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGA 199 + A A + + ++ +++I S+ +ER+ +A D+ + + + + G Sbjct: 120 RTRELAQATLAGVRGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAASRRVAAGK 179 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 S + K E + E ++ S + ++ L G + +F Q NL Sbjct: 180 ISPVDETKARVEQANAELELAEATASLQSARQALTALWGNASPQFAEA--------QGNL 231 Query: 260 YIPINIGIPADL---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS 316 + P L + N P + +L A +G+ +S YP L++ S+ D Sbjct: 232 DALPSRPAPELLQKELENSPLVAASRAELDRRQALVGVERSRQYPDLTV--SLGAKRDTE 289 Query: 317 FPGYNTHWS-FGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 N + + G + LPIFD+ G + S IR+A+ AQ++Y+ N I N L Sbjct: 290 ---ANRNMAVIGVAIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTRNLL 339 Query: 374 TSINE----DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + N+ T Q + +++ + + I + G+++ LD+LD +R Sbjct: 340 MASNQLSVSRASAQTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 389 >gi|53714646|ref|YP_100638.1| putative outer membrane protein [Bacteroides fragilis YCH46] gi|52217511|dbj|BAD50104.1| putative outer membrane protein [Bacteroides fragilis YCH46] Length = 489 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 180/440 (40%), Gaps = 59/440 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISH 106 SL + ++AL+ N + + ++ + S + + FP+ AS I+ Sbjct: 57 SLQECREMALKYNKEMAASIKQTESTHYTAKSYKGNFFPNFTASGTGLYSNADGSYGIAG 116 Query: 107 RFIPNLKTNSTGQL------------DSDWKID-------------LFGQRRHIESSLAN 141 +P ++TGQL + D+KI G + ++ Sbjct: 117 GNLPTFLPDATGQLIPNGGFAYFPGINLDYKIGWVYMGGIQLEQPLYMGGKITAAYKMSV 176 Query: 142 LDSAYAQVD--IAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFT 196 L AQ++ + VI K +Y + A+ K H +L KKN+E + + Sbjct: 177 LGKQMAQMNETLTATEVILKTDQAYALVVKAKEMKVVADAYHTVLTELKKNVESA---YK 233 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G + ++K++ + E + E +FR+ N+ L+G P T +H S NF Sbjct: 234 HGLKPQNDVLKVQVRLNESELAVRKAENAFRLATMNLCHLIGKPLTADIHV----SGNF- 288 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--- 313 P + + I + I RP+ +K++A + ++ + +S+L P + + GS H Sbjct: 289 PEIEQGLEIQVLD--ITARPEYTILDKQVAIAKQQVKLNRSELLPKIGIKGSYDYVHGLE 346 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D +F N +S + +P+F G+ + +R A++ ++ + Q + E+ Sbjct: 347 LNDKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQSLNEQMLLELTR 405 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A +++E K +++ +++ +S Y G +L D L+ + + A Sbjct: 406 AANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDHLEGQALWQQAYETKVNA 465 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 QL +YV A G YN Sbjct: 466 HFQLYLNYVAYLKAAGILYN 485 >gi|194427099|ref|ZP_03059650.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli B171] gi|194414720|gb|EDX30991.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli B171] Length = 478 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 185/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVDCVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNN---------QTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAGSNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|323140908|ref|ZP_08075821.1| outer membrane efflux protein [Phascolarctobacterium sp. YIT 12067] gi|322414646|gb|EFY05452.1| outer membrane efflux protein [Phascolarctobacterium sp. YIT 12067] Length = 466 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 11/262 (4%) Query: 192 HLKFTQ-----GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 HLK Q G +K+ +++ + E+ + + + E ++++ N++ ++G P L Sbjct: 181 HLKNVQAQYNVGVVAKVDVLRSQVELANAKQTLIQAENAYQVAEANMNKIVGLPMDTTL- 239 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 K N N Y A +RP++ + + + + +A+S P ++ + Sbjct: 240 ---KLDNLLVYNAYDKNMDDCLAYAAEHRPELMQAKYGVDAAKGALMVARSGHMPQVAAS 296 Query: 307 GSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 + + D+S+PG N W G + + +FD G S I AE+ ++ T++ TV + Sbjct: 297 ATQQWS-DSSWPGDDNGKWGVGVNVSMNVFDTGVTLSKIHGAEADLKKAEETYRNTVDSV 355 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 +V + + E +K ++ + AVE + ++ + Y G + D+LD + A + + Sbjct: 356 NLDVRSNYLGLREAEKRISTTKLAVEQADEDYRIAQLRYMSGVGTNTDVLDAQVALTQAK 415 Query: 426 VDLSIAKRQLAKSYVDLYIAIG 447 + + A S L +IG Sbjct: 416 TNYTKALYDYNTSKTALETSIG 437 >gi|170019544|ref|YP_001724498.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli ATCC 8739] gi|188496178|ref|ZP_03003448.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli 53638] gi|194436133|ref|ZP_03068235.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli 101-1] gi|253772934|ref|YP_003035765.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256022177|ref|ZP_05436042.1| multidrug resistance outer membrane protein MdtQ [Escherichia sp. 4_1_40B] gi|297517868|ref|ZP_06936254.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli OP50] gi|300917021|ref|ZP_07133716.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 115-1] gi|300955839|ref|ZP_07168180.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 175-1] gi|307138796|ref|ZP_07498152.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli H736] gi|169754472|gb|ACA77171.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli ATCC 8739] gi|188491377|gb|EDU66480.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli 53638] gi|194424861|gb|EDX40846.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli 101-1] gi|253323978|gb|ACT28580.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300317306|gb|EFJ67090.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 175-1] gi|300415696|gb|EFJ99006.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 115-1] gi|323936753|gb|EGB33038.1| outer membrane efflux protein [Escherichia coli E1520] gi|323940792|gb|EGB36980.1| outer membrane efflux protein [Escherichia coli E482] gi|323961646|gb|EGB57251.1| outer membrane efflux protein [Escherichia coli H489] gi|323972877|gb|EGB68075.1| outer membrane efflux protein [Escherichia coli TA007] gi|332343917|gb|AEE57251.1| efflux transporter, outer membrane factor lipoprotein [Escherichia coli UMNK88] Length = 478 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|110806116|ref|YP_689636.1| multidrug resistance outer membrane protein MdtQ [Shigella flexneri 5 str. 8401] gi|110615664|gb|ABF04331.1| putative channel/filament proteins [Shigella flexneri 5 str. 8401] Length = 508 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 41 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 89 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 90 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 149 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 150 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 209 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 210 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVDGVETDIN 269 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ ++ L + Q +S +P + +P +L Sbjct: 270 ASKTRQQLNDVAGKMKIIEARLNALTNH---------QTKSLKLKPVALPKVASQLPDEL 320 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 321 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 380 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 381 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 437 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 438 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 495 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 496 IRLTGALGGGY 506 >gi|256830563|ref|YP_003159291.1| outer membrane efflux protein [Desulfomicrobium baculatum DSM 4028] gi|256579739|gb|ACU90875.1| outer membrane efflux protein [Desulfomicrobium baculatum DSM 4028] Length = 435 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/414 (19%), Positives = 170/414 (41%), Gaps = 40/414 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKT 114 ++ + V+I L+ N +IL A E ++A+ + S +A P+ Y + R P Sbjct: 27 TMREAVEIGLKSNPSILAAREALSASDYAVKSAKAAFGPALSTQYGYTRLDER--PQSLG 84 Query: 115 NSTGQLDSDWKIDL---------FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + G LD +W++ F E ++ + A +Q+D +L +I + +++ Sbjct: 85 FTAGALD-NWELVFNVHQPLFTGFNLLTTHEKTILQKEQAASQIDNVELQLIVAIQDTFL 143 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E + A L + +++S + G KL +++ E ++ + E + + + + Sbjct: 144 RLLQARENVRSAEDSLVRLRSQLKVSTAFYEVGLRPKLDMLQAEVDVANAEQLMLSAKNN 203 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR---NRPDIRYQE 282 ++TLLG + Y + Y P+ + + L R +RPD+R Sbjct: 204 EATLNAQLNTLLGKSVEADVEYAGELR-------YFPMPLTLEECLARAGQHRPDLRIAR 256 Query: 283 KKLADSVAKIGIAKSDLYPSLSLN------GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + + + +A YP + + G L H + + W+ + F+ Sbjct: 257 QSVMLAEKDKVLAAVPYYPQVGADFNYVRAGEDPLVHGGDYHT-PSQWNAQVGMKWTFFE 315 Query: 337 KGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 GK ++AE S ++Y+ + +A EV+ + I +K ++ + + Sbjct: 316 WGKTYYGEKQAEKNVSRLGQEYLNLEN---DAAFEVKKSFLQIETAEKRISAARQGLIAA 372 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 K+S +++ Y + D+LD + E L A +S +LY A+G Sbjct: 373 KESYRMAVARYEAQVGTNTDVLDAQAKQTLSEASLHEALSDYERSVAELYGAMG 426 >gi|170681074|ref|YP_001742985.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli SMS-3-5] gi|170518792|gb|ACB16970.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli SMS-3-5] Length = 478 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 185/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQELSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARVAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTLIVTDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|167589501|ref|ZP_02381889.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 159 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 3/155 (1%) Query: 301 PSLSLN--GSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P+L+L G A SF N+ W G + + D GK ++ + A + Sbjct: 3 PTLTLTAQGGFASRDLGSFLDRNSSLWGLGASVAQTLLDGGKRRAAVDAARAGTDIAAAN 62 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 ++ T L+A+++V++AL I K+ + + A + LS+ Y G S L+++D Sbjct: 63 YRATALDALRDVQDALNDIAAQKERIARYDSAARATDAAARLSLSRYGHGYVSYLEVIDA 122 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 +R L +++ LA + V L A+G G+ P Sbjct: 123 DRDALNARRQLIHSRQALATATVGLVRALGGGWTP 157 >gi|293405607|ref|ZP_06649599.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli FVEC1412] gi|298381289|ref|ZP_06990888.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli FVEC1302] gi|300901243|ref|ZP_07119344.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 198-1] gi|284922124|emb|CBG35205.1| multidrug resistance outer membrane protein [Escherichia coli 042] gi|291427815|gb|EFF00842.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli FVEC1412] gi|298278731|gb|EFI20245.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli FVEC1302] gi|300355317|gb|EFJ71187.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 198-1] Length = 478 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 94/493 (19%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPASQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|300728012|ref|ZP_07061388.1| outer membrane efflux protein [Prevotella bryantii B14] gi|299774727|gb|EFI71343.1| outer membrane efflux protein [Prevotella bryantii B14] Length = 447 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/317 (22%), Positives = 128/317 (40%), Gaps = 30/317 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 +L + + ALQ N+TI + A E++L +A L PS AS S Sbjct: 27 TLQECINYALQNNITIQKNHLLKLKANEDVLESKAALLPSLSASTSQNVNYTPWVESGAV 86 Query: 109 ---------IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVI 157 + + N T ++++W I G R L L S A +D L++ Sbjct: 87 SSDGYSRSSVDKVSYNGTYSVNANWTI-WNGNRNKNTIKLNQLASEKASIDSVTTALSIQ 145 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++ YI + KE I + Q L++ K+N+ G SK + +LEA++ + Sbjct: 146 EQIVQYYIQILYSKEAIKVNEQSLEMSKENLSRGQEMLKVGKMSKADVAQLEAQVAQDQY 205 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ + + + + LL E + N +P + A + RP+ Sbjct: 206 NVVSSQSNVANYKRQLKQLLQITNDEDFDIAVTEQTNEMALSSVPSLNSVYAAALETRPE 265 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGS-----IALTHDNSFPGYNTHWSFGPKLY- 331 I+ + + S I +AK+ P++S N +L+ N T+++ G L Sbjct: 266 IKSYQNAIDQSDISIKMAKAQNLPTISANAGLSTSSTSLSSTNIGSQLKTNFALGGGLTV 325 Query: 332 -LPIFDKGKIKSNIRRA 347 +PI+D K+ +A Sbjct: 326 SIPIYDNRSKKTATNKA 342 >gi|167741948|ref|ZP_02414722.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 344 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY---NTHWSFG 327 ++ RPDI E +L + A IG A++ +P ++L G++ + S G W F Sbjct: 1 MLERRPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVA-SASLAGLFSGGVAWLFV 59 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 P+L LPIF+ G ++N+ A ++ T+ +A +EV + L + ++ V + Sbjct: 60 PQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQE 119 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ L+ + +R G + D +R + L K S V LY A+G Sbjct: 120 AMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALG 179 Query: 448 SGY 450 G+ Sbjct: 180 GGW 182 >gi|60682660|ref|YP_212804.1| hypothetical protein BF3191 [Bacteroides fragilis NCTC 9343] gi|265765892|ref|ZP_06093933.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60494094|emb|CAH08886.1| putative exported protein [Bacteroides fragilis NCTC 9343] gi|263253560|gb|EEZ25025.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 459 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 180/440 (40%), Gaps = 59/440 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISH 106 SL + ++AL+ N + + ++ + S + + FP+ AS I+ Sbjct: 27 SLQECREMALKYNKEMAASIKQTESTHYTAKSYKGNFFPNFTASGTGLYSNADGSYGIAG 86 Query: 107 RFIPNLKTNSTGQL------------DSDWKID-------------LFGQRRHIESSLAN 141 +P ++TGQL + D+KI G + ++ Sbjct: 87 GNLPTFLPDATGQLIPNGGFAYFPGINLDYKIGWVYMGGIQLEQPLYMGGKITAAYKMSV 146 Query: 142 LDSAYAQVD--IAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFT 196 L AQ++ + VI K +Y + A+ K H +L KKN+E + + Sbjct: 147 LGKQMAQMNETLTATEVILKTDQAYALVVKAKEMKVVADAYHTVLTELKKNVESA---YK 203 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G + ++K++ + E + E +FR+ N+ L+G P T +H S NF Sbjct: 204 HGLKPQNDVLKVQVRLNESELAVRKAENAFRLATMNLCHLIGKPLTADIHV----SGNF- 258 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--- 313 P + + I + I RP+ +K++A + ++ + +S+L P + + GS H Sbjct: 259 PEIEQGLEIQVLD--ITARPEYTILDKQVAIAKQQVKLNRSELLPKIGIKGSYDYVHGLE 316 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D +F N +S + +P+F G+ + +R A++ ++ + Q + E+ Sbjct: 317 LNDKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQSLNEQMLLELTR 375 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A +++E K +++ +++ +S Y G +L D L+ + + A Sbjct: 376 AANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDHLEGQALWQQAYETKVNA 435 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 QL +YV A G YN Sbjct: 436 HFQLYLNYVAYLKAAGILYN 455 >gi|238019668|ref|ZP_04600094.1| hypothetical protein VEIDISOL_01542 [Veillonella dispar ATCC 17748] gi|237863709|gb|EEP64999.1| hypothetical protein VEIDISOL_01542 [Veillonella dispar ATCC 17748] Length = 491 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 82/394 (20%), Positives = 163/394 (41%), Gaps = 51/394 (12%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI 109 K +ES D ++ +++AL N T Q AAK + V A PS SY + + Sbjct: 64 KTYESKLDLDESRTIELALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYGWSAQKTG 123 Query: 110 PNLKTNSTG-------------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 + +G QLD+ ID R E + A+ + A Q AK + Sbjct: 124 GDTGRGKSGSHNFSISAPVFNPQLDAS--ID--SARYTREGTGASYEEALQQ---AKYDA 176 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 IS Y + + +A Q + Y+ ++ ++ G + ++ + + E Sbjct: 177 IS----GYYTLIMNRNLVDVAQQAVKDYQGHVTNVQAQYNVGLVASSDVLAAKTNLADSE 232 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIP------- 268 +++ + S + +++ ++ YPA Q N + +L Y P NI + Sbjct: 233 TNLVKAQNSSNLAEASLNQVIAYPA-------QTAINTAEHDLQYKPYNITLEQAKAYAL 285 Query: 269 ---ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-W 324 + L+++ D++ E+ + AKS P++++ + + G +T W Sbjct: 286 LHRSALVKSALDVKSAEEAVKS-------AKSGYLPTVAVKAGRGYADPDGYFGTSTKSW 338 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S G ++D G ++ I++A + ++ TV + V+ A ++ ++ + Sbjct: 339 SVGATASWSLWDGGATQNAIKKANAQLEQAKEANLATVDAVLLAVQKAYLNLRSAEQTIQ 398 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q AV ++S ++ + YR G + LD+LD E Sbjct: 399 STQTAVAQGQESFRIATLRYRAGVGTNLDVLDAE 432 >gi|333002855|gb|EGK22411.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-272] gi|333016859|gb|EGK36183.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-227] Length = 478 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L ++L+ GC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLLMLV-GCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDTAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VDGVETDINASKTRLQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KKQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|301164138|emb|CBW23694.1| putative exported protein [Bacteroides fragilis 638R] Length = 459 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 180/440 (40%), Gaps = 59/440 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISH 106 SL + ++AL+ N + + ++ + S + + FP+ AS I+ Sbjct: 27 SLQECREMALKYNKEMAASIKQTESTHYTAKSYKGNFFPNFTASGTGLYSNADGSYGIAG 86 Query: 107 RFIPNLKTNSTGQL------------DSDWKID-------------LFGQRRHIESSLAN 141 +P ++TGQL + D+KI G + ++ Sbjct: 87 GNLPTFLPDATGQLIPNGGFAYFPGINLDYKIGWVYMGGIQLEQPLYMGGKITAAYKMSV 146 Query: 142 LDSAYAQVD--IAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFT 196 L AQ++ + VI K +Y + A+ K H +L KKN+E + + Sbjct: 147 LGKQMAQMNETLTATEVILKTDQAYALVVKAKEMKVVADAYHTVLTELKKNVESA---YK 203 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G + ++K++ + E + E +FR+ N+ L+G P T +H S NF Sbjct: 204 HGLKPQNDVLKVQVRLNESELAVRKAENAFRLATMNLCHLIGKPLTADIHV----SGNF- 258 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--- 313 P + + I + I RP+ +K++A + ++ + +S+L P + + GS H Sbjct: 259 PEIEQGLEIQVLD--ITARPEYAILDKQVAIAKQQVKLNRSELLPKIGIKGSYDYVHGLE 316 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D +F N +S + +P+F G+ + +R A++ ++ + Q + E+ Sbjct: 317 LNDKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQSLNEQMLLELTR 375 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A +++E K +++ +++ +S Y G +L D L+ + + A Sbjct: 376 AANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDHLEGQALWQQAYETKVNA 435 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 QL +YV A G YN Sbjct: 436 HFQLYLNYVAYLKAAGILYN 455 >gi|301305183|ref|ZP_07211282.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|301325250|ref|ZP_07218768.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 78-1] gi|309793017|ref|ZP_07687445.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 145-7] gi|331653566|ref|ZP_08354567.1| putative channel/filament protein [Escherichia coli M718] gi|331678087|ref|ZP_08378762.1| putative channel/filament protein [Escherichia coli H591] gi|300839587|gb|EFK67347.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 124-1] gi|300847910|gb|EFK75670.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 78-1] gi|308123303|gb|EFO60565.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 145-7] gi|331048415|gb|EGI20491.1| putative channel/filament protein [Escherichia coli M718] gi|331074547|gb|EGI45867.1| putative channel/filament protein [Escherichia coli H591] Length = 505 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 87 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 258 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 492 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 493 IQLTGALGGGY 503 >gi|312602284|ref|YP_004022129.1| type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] gi|312169598|emb|CBW76610.1| Type I secretion outer membrane protein [Burkholderia rhizoxinica HKI 454] Length = 531 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 79/353 (22%), Positives = 161/353 (45%), Gaps = 36/353 (10%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENI-LSVRADLFPSSYAS------ 103 +WW + +LN V L+ N T+ A + + AA+E + + + PS A Sbjct: 113 RWWMLYQSDALNAWVDEGLRNNATLAAAEKTLAAAREQLHAQIGESMLPSIDAGGQVQRQ 172 Query: 104 ----ISHRFIPNLKTNS-TGQLDSDWKIDLFGQRRHIESSLAN-LDSAYAQVDIAKLNVI 157 + + P L+ N+ GQ+ +++ IDLFG R +++ +D Q D A+ + Sbjct: 173 RALGMPIQGPPTLRYNTFVGQIRANYTIDLFGAARLANQAVSRRVDVQSYQFDAARRTLA 232 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + ++ + + A E+ +I L + + + GA S++ + ++ + Sbjct: 233 ANIVSAALAAASLHEQWDAQARIAALAAAEADDTDKRVALGAASQVDALNARQSAQAAAA 292 Query: 218 DIPTLEKSFRMNVHNISTLLGY---PATEFLHYMQKQSNNFQPNLYIP--INIGIPADLI 272 +P L + H ++ L+G A E L + L +P + + +P+ L+ Sbjct: 293 AVPPLRAQWLAARHALAVLMGRTPDAAPEDLPLDR---------LTLPDTVPVSLPSTLL 343 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 RPD+ + + + A++G+A + ++PSL+L+ G L+ + W+ G Sbjct: 344 HERPDVLAADAAVQAAAAEVGVATAQMFPSLTLSASWGQGGLSWPLATRAAGRLWNLGAG 403 Query: 330 LYLPIFDKGKIKSNIR---RAESSAQEQYITWQETVLNAIKEVENALTSINED 379 L P+F +++ R A +A +QY ++TVLNA ++V + L ++ +D Sbjct: 404 LTQPLFHGSALRAQRRAALHAYDAALDQY---RQTVLNAFRDVADTLVALEQD 453 >gi|330955376|gb|EGH55636.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae Cit 7] Length = 308 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 19/265 (7%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISH 106 ++WW+ F LN+L++ A + + A R+ A+ + + A L P + Sbjct: 47 IRWWQQFGSPQLNRLIEQASLDSHEVAAAMARVRQAQASAIIGGAPLLPELAFDLRGERN 106 Query: 107 RFIPNLK-----------TNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 RF+ N N T L + +++D +G +S+L L ++ +L Sbjct: 107 RFLRNSDRKAHPSDDNNTNNFTSDLTASYEVDFWGGIAAGRDSALQGLRASQFDQATVEL 166 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +++ + Y +E+ IA L + + L ++ G+ + L L + + + + Sbjct: 167 TLLANVADRYAQTLAAREQGRIAELNLANAQDVLRLVQTRYESGSATALELTQQKNLVAA 226 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + ++P +++ + ++ LLG P + LH + + + I G+P++L+ Sbjct: 227 QQRELPRVQQLANEQLITLAALLGQP-VQNLHLADQPFDTLN---WPDIGPGLPSELLTR 282 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDL 299 RPD+ E LA + A + +A++ L Sbjct: 283 RPDLAKAEADLAAAQANVTVARAAL 307 >gi|332278707|ref|ZP_08391120.1| multidrug resistance outer membrane protein MdtQ [Shigella sp. D9] gi|332101059|gb|EGJ04405.1| multidrug resistance outer membrane protein MdtQ [Shigella sp. D9] Length = 508 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 41 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 89 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 90 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 149 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 150 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 209 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 210 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 260 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 261 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 320 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 321 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 380 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 381 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 437 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 438 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 495 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 496 IQLTGALGGGY 506 >gi|313896139|ref|ZP_07829693.1| outer membrane efflux protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975564|gb|EFR41025.1| outer membrane efflux protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 468 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 13/272 (4%) Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++I +Y +A ++ + + + Y ++ + GA +++ +++ E+ + + Sbjct: 135 EVIAAYYNAVEALKKTEVQREAVGNYDAHLGNVTALYEAGAQARIDVLRSSVELSNARQE 194 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR----N 274 + + E ++ +N+ + LL E LH + Y+P + + D I N Sbjct: 195 LISAENAYEVNLATLRNLLNMDRGEELHLTTDVA-------YVPFDKAVQ-DCIAYAYGN 246 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGYNTHWSFGPKLYLP 333 R D++ Q+ LA + IAK+ P+++L GS + N S + Sbjct: 247 RRDLQVQKDTLAQRELAVDIAKAGKKPTVNLTVGSGITSQFRPRSDTNRDVSASVGVNWN 306 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IFD G ++ I AE+ + + T ++ A ++ E +K T AV+ Sbjct: 307 IFDSGVTRAQIDAAEAERDTALLNVRRTEETIDLDLRKAYLNLREAEKRFTATGDAVKQA 366 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 ++ ++ YR G LLD+LD + A +K + Sbjct: 367 EEDYFIASQRYRAGEGILLDVLDAQLALSKAK 398 >gi|117624341|ref|YP_853254.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli APEC O1] gi|115513465|gb|ABJ01540.1| putative channel/filament protein [Escherichia coli APEC O1] Length = 505 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT+ +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 87 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 258 VEGVETDINASKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDAS 492 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 493 IQLTGALGGGY 503 >gi|323977673|gb|EGB72759.1| outer membrane efflux protein [Escherichia coli TW10509] Length = 478 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINYALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVVGKMKIIEARLSALTNH---------QIKSLKLKPVELPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|281179231|dbj|BAI55561.1| putative channel protein [Escherichia coli SE15] Length = 478 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 185/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|162138408|ref|YP_541411.2| multidrug resistance outer membrane protein MdtQ [Escherichia coli UTI89] Length = 478 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT+ +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPNLK---------TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNYPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|330995830|ref|ZP_08319727.1| outer membrane efflux protein [Paraprevotella xylaniphila YIT 11841] gi|329574560|gb|EGG56125.1| outer membrane efflux protein [Paraprevotella xylaniphila YIT 11841] Length = 452 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 133/337 (39%), Gaps = 50/337 (14%) Query: 48 DTLKWWESFNDTSLNKLVKIALQQNLTILQA--TERINAAKENILSVRADLFPS------ 99 D+ +W SL + + A+ N+ + Q TE AA ++L +A+LFPS Sbjct: 26 DSTRW-------SLQECIDYAIAHNIQLKQNKITEEQGAA--DLLQKKAELFPSLSFSTT 76 Query: 100 ----------SYASISHRFIPN-----LKTNSTGQLDSDWKI-DLFGQRRHIESS-LANL 142 S SI I N L N L++ W + D R++I++ L N Sbjct: 77 QAIDYRPLQKSETSIVANGIANSSSNKLTENGNYGLNASWTVWDGGANRKNIKAQKLQNQ 136 Query: 143 DSAYAQVDIAKLNVISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 SA A A N I + I Y+ + K+ + + + + K + QG S Sbjct: 137 ISALATQ--ATANSIQEQIAQLYVQILYSKDALDVNKAMEETAKSQFGRGKEMYEQGQIS 194 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 K L +LEA+ S + D + + LL +N+ I Sbjct: 195 KADLAQLEAQAASAQYDCVATQTQIDNYKRQLKELLEITDDRKFDISGIGTNDEATMQLI 254 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG-- 319 P + + RP+I+ + + I IAK+ YPS+SL I +H + G Sbjct: 255 PSVNEVYQKALNLRPEIQSSRLGIDAADLDIDIAKAGYYPSISLTAGIGDSH---YSGSR 311 Query: 320 --------YNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 N S G L +PIFD + K+N+++A+ Sbjct: 312 ESAGEQMRQNLSASAGVTLSIPIFDNKRNKTNVQKAK 348 >gi|222053957|ref|YP_002536319.1| outer membrane efflux protein [Geobacter sp. FRC-32] gi|221563246|gb|ACM19218.1| outer membrane efflux protein [Geobacter sp. FRC-32] Length = 428 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 12/260 (4%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ DA ++R+++ + + L ++ ++++ + G +L + ++ E+ E + Sbjct: 138 AFYDAILAEQRLNLTDRSIALNRQLLDVTKERLAAGDIPELEMNLVKVELTRSEGTRIEV 197 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E++ N + TL+G PA E N+ P +++ A + RPD++ E Sbjct: 198 ERALLQNRARLFTLMGLPAIESPAIAGNLDNDL-PTAKSLVDLKQLA--LVKRPDLKVLE 254 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHD-NSFPGYNTHWSFGPKLYLPI--FD 336 + + A I +AKS+ P+L+ ++ A T + G +T + G KL +PI FD Sbjct: 255 AEKSKGEADIALAKSEAIPNLTAGFTVTREATTIEVGGVEGKDTDYIVGVKLSIPIPVFD 314 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS-INEDKKIVTKLQHAVELHKK 395 K + RA+ S + T A +EVE A S +N DK + + + ++ Sbjct: 315 KNQAGIQEARAKRSTTDSRFTA--ATRRAEREVETAHASYLNADKILSLYKSNIIPQLEE 372 Query: 396 SMSLSMINYRQGRYSLLDIL 415 ++ L+ YR G +L ++ Sbjct: 373 NLKLTQEAYRLGEVGILAVI 392 >gi|222054049|ref|YP_002536411.1| acriflavin resistance protein [Geobacter sp. FRC-32] gi|221563338|gb|ACM19310.1| acriflavin resistance protein [Geobacter sp. FRC-32] Length = 1489 Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 117/282 (41%), Gaps = 13/282 (4%) Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + A Q L+ K++++ + K+T+G ++ ++ + + ++ E R Sbjct: 1212 RELNAFASQNLEQKKRHLDETRKKYTEGIATEYDVLAAGVTVDNARPEVIRTENQIRTAS 1271 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 + LL + P+ I + + RP++ +L Sbjct: 1272 QELRYLLALDHE--IEVSGALDAAITPHATYEEAIAVAE---KKRPELADLRHRLGMYEE 1326 Query: 291 KIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 + +A +D P L L GS DN G+ WS G L P FD + + Sbjct: 1327 LVNVAAADNKPRLDLKGSYGWKQLEIGDNKADGFA--WSAGIYLSFPFFDGFRTSGKTAQ 1384 Query: 347 AESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 AES+ + I + L+AI + NA+ ++ E ++IV L V+ ++ ++++ Y Sbjct: 1385 AESTVRSLKID-EAKQLDAIALDARNAVNALAESEEIVNALSGTVKQAERLLTMAEKGYE 1443 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 G L++ D E + + + S AKR + V+L +G Sbjct: 1444 LGVKIRLEVEDAELNLLQAKSNFSRAKRDYLVARVNLDWVMG 1485 >gi|189458503|ref|NP_288715.4| multidrug resistance outer membrane protein MdtQ [Escherichia coli O157:H7 str. EDL933] Length = 478 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/493 (18%), Positives = 188/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R ++++ + + Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQXNDVAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + J A+G GY Sbjct: 464 ASIQJTGALGGGY 476 >gi|227887194|ref|ZP_04004999.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli 83972] gi|26108924|gb|AAN81127.1|AE016763_86 Putative channel/filament proteins [Escherichia coli CFT073] gi|227835544|gb|EEJ46010.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli 83972] Length = 508 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 94/495 (18%), Positives = 189/495 (38%), Gaps = 79/495 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 41 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 89 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 90 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 149 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R I + L + + A+ + Sbjct: 150 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEITARLGTVKARAAEREQ 209 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 210 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 260 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ------PNL--YIPI 263 ++ +E+DI R +++++ + Q+ + + P + +P Sbjct: 261 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKTVALPKVASQLPD 318 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGY 320 +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 319 ELGY--SLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHS 376 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + Sbjct: 377 AQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---Q 433 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQL 435 + K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 434 TLAEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQW 491 Query: 436 AKSYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 492 LDASIQLTGALGGGY 506 >gi|325299736|ref|YP_004259653.1| outer membrane efflux protein [Bacteroides salanitronis DSM 18170] gi|324319289|gb|ADY37180.1| outer membrane efflux protein [Bacteroides salanitronis DSM 18170] Length = 450 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 92/381 (24%), Positives = 163/381 (42%), Gaps = 48/381 (12%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------- 109 +L + AL++N+ + Q + ++ +I RA LFP+ S H + Sbjct: 30 TLEDCINYALEKNIQLQQDKISLQESEIDIKDARASLFPTLSFSTGHNVVNRPYQEQSST 89 Query: 110 ----------PNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL-NVIS 158 N + +++ W + G+R + + A AQ+ +++ N + Sbjct: 90 VSGTEIISSDSRTTYNGSYSVNAAWTLWNGGKRLNTLKQ-QKTNKAIAQLSVSETENTLQ 148 Query: 159 KLIPS-YIDARHFKERISIAHQILDL----YKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 + I +I + E ISI L++ YK+ EL F +G+ SK L +LEA++ Sbjct: 149 EQIAQLFIQILYADESISINKGTLEVSEATYKRGEEL----FKEGSISKADLAQLEAQVS 204 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + + + E S R + LL TE + + Q +P I + Sbjct: 205 NDKYQVVSAESSLRDYKLQLKQLLELDGTEEMDLVLPQLEYEDIMRLLPNQTDIYQTALS 264 Query: 274 NRPDIRYQEKKLADSVAKIGI--AKSDLYPSL-SLNGSIALTHDNSFPGYNTHWSFG--- 327 RP+I Q KL+ AK+GI AK+ YP++ S ++T++ S + +G Sbjct: 265 IRPEI--QSGKLSIENAKLGISAAKAGYYPTISLSASSSSMTNNASTNNWAQQMKYGWNN 322 Query: 328 ---PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L +PIFD + KSN+++ A+ QY T Q ++N KE+ + + + D Sbjct: 323 MISINLSIPIFDNRQNKSNVQK----ARLQYNTSQLDLINKQKELYSTIEGLWLDALNAQ 378 Query: 385 KLQHAVELHKKS--MSLSMIN 403 + A E KS S M+N Sbjct: 379 QQYAAAETKVKSSQTSFDMVN 399 >gi|114321294|ref|YP_742977.1| outer membrane efflux protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227688|gb|ABI57487.1| outer membrane efflux protein [Alkalilimnicola ehrlichii MLHE-1] Length = 472 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/307 (17%), Positives = 133/307 (43%), Gaps = 9/307 (2%) Query: 114 TNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 T L +++ + FG+R+H + ++ ++L + A+++ + + + +Y D F+ Sbjct: 128 TRYGAALQAEYMLYDFGRRQHGKRAAESHLGTEQARLNDITSSTVFNVTQAYFDVLRFQN 187 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 + I + L+ ++N++L+ G ++ ++K EAE ++ + Sbjct: 188 ALRIQEEFLERRQENLDLARRMHRAGRVTRGDVIKAEAERARARLEVTRAGHDLEASRVR 247 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG---IPADLIRNRPDIRYQEKKLADSV 289 + T +G + + + + L P +G +I + P ++ + + L Sbjct: 248 LRTAMGLDEAGWAFSVVEGAQ-----LTPPQELGRRDATHRVIEDHPRLQAERQFLRAHH 302 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 ++ K+D P + L G+ + +S PG +++ G +L FD G+ ++ A + Sbjct: 303 EELEQVKADRRPEIRLTGNYRVDEFHSGPGSEPNYTVGVQLEWRFFDGGQRRARAAEARA 362 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 +E + + E+ NA + E ++ + + + ++ + + I YR+G Sbjct: 363 EMMAAAERQREARRDVLTELHNAQRELTEAEERIELSKTLIRAAEQDLRSATIGYREGIR 422 Query: 410 SLLDILD 416 + D+ D Sbjct: 423 AFSDLSD 429 >gi|307554207|gb|ADN46982.1| putative channel/filament protein [Escherichia coli ABU 83972] Length = 505 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 94/495 (18%), Positives = 189/495 (38%), Gaps = 79/495 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 87 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R I + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEITARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 257 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ------PNL--YIPI 263 ++ +E+DI R +++++ + Q+ + + P + +P Sbjct: 258 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKTVALPKVASQLPD 315 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGY 320 +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 316 ELGY--SLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHS 373 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + Sbjct: 374 AQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---Q 430 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQL 435 + K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 431 TLAEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQW 488 Query: 436 AKSYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 489 LDASIQLTGALGGGY 503 >gi|187928847|ref|YP_001899334.1| outer membrane efflux protein [Ralstonia pickettii 12J] gi|187725737|gb|ACD26902.1| outer membrane efflux protein [Ralstonia pickettii 12J] Length = 418 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 41/337 (12%) Query: 104 ISHRFIPN----------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIA 152 + R IPN K+ T + I+L G+R I ++ + A A + Sbjct: 73 MQARVIPNPELQTLVEDTRKSTRTSTAQMNIPIELGGKRSARINAAERTRELAQATLAGV 132 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + ++ +++I S+ +ER+ +A D+ + + + + G S + K E Sbjct: 133 RGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAASRRVAAGKISPVDETKARVEQ 192 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + E ++ S + ++ L G + +F Q NL + P L+ Sbjct: 193 ANAELELAEATASLQSARQALTALWGNASPQFTEA--------QGNLDALPSRPAPELLL 244 Query: 273 R---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGP 328 + N P + +L A +G+ +S YP L++ S+ D N + + G Sbjct: 245 KELENSPLVAASRAELDRRQALVGVERSRQYPDLTV--SLGAKRDTE---ANRNMAVIGV 299 Query: 329 KLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE----DKKI 382 + LPIFD+ G + S IR+A+ AQ++Y+ N I N L + N+ Sbjct: 300 AIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTRNLLMASNQLSVSRASA 352 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T Q + +++ + + I + G+++ LD+LD +R Sbjct: 353 QTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 389 >gi|56130690|ref|YP_145593.1| putative cobalt-zinc-cadmium outer membrane resistance protein [Ralstonia metallidurans CH34] gi|56068680|emb|CAA50525.2| putative cobalt-zinc-cadmium outer membrane resistance protein [Cupriavidus metallidurans CH34] Length = 377 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 44/353 (12%) Query: 90 LSVRADLFPSSYASISH-RFIPN--LKT----------NSTGQLDSDWKIDLFGQRR-HI 135 LS A S+ I R IPN LKT ST Q++ I+L G+R I Sbjct: 17 LSAAAKELDSTEGGIMQARVIPNPELKTLVEDTRKSTRTSTAQMN--IPIELGGKRSARI 74 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 ++ + A A + + ++ +++I S+ +ER+ +A D+ + + + + Sbjct: 75 NAAERTRELAQATLAGVRGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAASRRV 134 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 G S + K E + E ++ S + ++ L G + +F Sbjct: 135 AAGKISPVDETKARVEQANAELELAEATASLQSARQALTALWGNASPQFAEA-------- 186 Query: 256 QPNLYIPINIGIPADL---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 Q NL + P L + N P + +L A +G+ +S YP L+ ++L Sbjct: 187 QGNLDALPSRPAPELLQKELENSPLVAASRAELDRRQALVGVERSRQYPDLT----VSLG 242 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 G + LPIFD+ G + S IR+A+ AQ++Y+ N I Sbjct: 243 AKRDTEANRNMAVIGVAIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTR 295 Query: 371 NALTSINE----DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 N L + N+ T Q + +++ + + I + G+++ LD+LD +R Sbjct: 296 NLLMASNQLSVSRASAQTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 348 >gi|110598473|ref|ZP_01386744.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] gi|110339923|gb|EAT58427.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/283 (20%), Positives = 125/283 (44%), Gaps = 13/283 (4%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 ++AY + A VI+ + +Y DA ++++ + Q + ++++ + F QG + Sbjct: 164 EAAYRNTEAA---VITDIKMAYFDALISRDQLKLIEQSIARWEESRRDTRAMFRQGVAAD 220 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYI 261 + +K ++++ ++ E + + + +G P TE L K Y Sbjct: 221 IDTLKAFLSVENLRPELLQAESRVGITMTKLKNAMGVTPDTE-LRLAGKL--ELSSAAYP 277 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--LTHDNSFPG 319 + + RPD+R E ++ K+ A+++ +P LS G + ++ Sbjct: 278 AEIAAAYEEALGQRPDLRQLELQVQAQGEKLSSARAERFPVLSAFGKLESQTAFNDGVKL 337 Query: 320 YNTHW----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + W + G +L +PIF +I S + +A+ + +++ N E+E L+S Sbjct: 338 SQSRWPVSSAVGLQLSMPIFTGFRISSQVEQAKIEQLQSRTRYEDLKANIRAEIEIILSS 397 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E KK + + + ++S +S + +R+G S L++ D E Sbjct: 398 YRESKKRIEVQSKTITVAERSYRISQLRFREGIGSRLELTDAE 440 >gi|323221279|gb|EGA05702.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 425 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 84/437 (19%), Positives = 170/437 (38%), Gaps = 80/437 (18%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAK---LNVISKLIPSYIDARHFKERI-SIAHQILDLYKKNIELSHLKFT---QGA 199 A+ + + + +++L + K + I H+ ++ N EL T +G Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVTVNRELYQHGITSSVEGV 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNN 254 + + K + ++ + + +E + S L PA E Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES---------- 284 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P +G L+ R D++ + S++ I AK+ YP ++L + AL Sbjct: 285 -----QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + L LPIFD G++ +N+ A++ + + + V++A+ +V Sbjct: 338 HLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVAR 397 Query: 372 ALTSINEDKKIVTKLQH 388 A + + + + K QH Sbjct: 398 AASQV---ETLAQKNQH 411 >gi|293410500|ref|ZP_06654076.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B354] gi|291470968|gb|EFF13452.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B354] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 91/491 (18%), Positives = 185/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPASQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLDDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|294778825|ref|ZP_06744242.1| outer membrane efflux protein [Bacteroides vulgatus PC510] gi|294447278|gb|EFG15861.1| outer membrane efflux protein [Bacteroides vulgatus PC510] Length = 426 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 124 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 183 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P IG Sbjct: 184 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFIGA 238 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 239 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 289 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 290 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLSKQY-ALQDKQDQISKEVAKAWTSL 348 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 349 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 390 >gi|119364610|sp|Q83KF5|MDTQ_SHIFL RecName: Full=Putative multidrug resistance outer membrane protein mdtQ; Flags: Precursor gi|332754771|gb|EGJ85136.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri 4343-70] gi|333002106|gb|EGK21672.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri K-218] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 94/493 (19%), Positives = 188/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 + +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VDGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIRLTGALGGGY 476 >gi|331658218|ref|ZP_08359180.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA206] gi|294492197|gb|ADE90953.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli IHE3034] gi|307626320|gb|ADN70624.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli UM146] gi|315285790|gb|EFU45230.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 110-3] gi|315299376|gb|EFU58628.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 16-3] gi|323951935|gb|EGB47809.1| outer membrane efflux protein [Escherichia coli H252] gi|323955904|gb|EGB51657.1| outer membrane efflux protein [Escherichia coli H263] gi|331056466|gb|EGI28475.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA206] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT+ +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 288 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 348 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 349 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 405 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 406 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 463 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 464 ASIQLTGALGGGY 476 >gi|301429532|dbj|BAJ12145.1| efflux pump outer membrane protein ttgc-like protein [Pseudomonas putida] Length = 110 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 3/107 (2%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGP 328 ++ RPDI E L + A IG A++ +PS+SL G+++ F G + W F P Sbjct: 1 LQRRPDILQAEYNLKAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQP 60 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 ++ LPIF+ G +++++ ++ +++++ A +EV + L + Sbjct: 61 QINLPIFNAGSLRASLDYSKIQKDIGVANYEKSIQTAFQEVADGLAA 107 >gi|170743944|ref|YP_001772599.1| TolC family type I secretion outer membrane protein [Methylobacterium sp. 4-46] gi|168198218|gb|ACA20165.1| type I secretion outer membrane protein, TolC family [Methylobacterium sp. 4-46] Length = 463 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 22/279 (7%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 159 LELNRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSLAESNLRTSIATY 218 Query: 234 STLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++G + + + F P NL I+IG+ R P + + + A++ Sbjct: 219 RQVVGVEPRQLAPG--RPLDRFVPGNLTAAIDIGL-----REHPQVISALHAVDVAEAQV 271 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNT-HWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 IA++ LYP++S++G++ D F + +L +P++ G + IR+A+ Sbjct: 272 KIAEAALYPTVSVSGTVQKLFDQQFAHTELFEGAVTARLSVPLYQGGVEYAAIRQAKEQV 331 Query: 352 QEQYI---TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + I T+++ V AI A + K V Q V+ ++ +++ R G+ Sbjct: 332 GQTRIQVETFRDQVRAAIV---TAWGGLEAAKARVIAQQAQVQANEVALNGVREEARVGQ 388 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + LD+L+ ++ V+L A+R S + +IG Sbjct: 389 RTTLDVLNAQQELLSARVNLIAAQRDRVVSSYQVVQSIG 427 >gi|157159177|ref|YP_001463485.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli E24377A] gi|191165358|ref|ZP_03027200.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli B7A] gi|193070521|ref|ZP_03051461.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli E110019] gi|209919597|ref|YP_002293681.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli SE11] gi|256017694|ref|ZP_05431559.1| multidrug resistance outer membrane protein MdtQ [Shigella sp. D9] gi|260856112|ref|YP_003230003.1| putative channel/filament proteins [Escherichia coli O26:H11 str. 11368] gi|293446489|ref|ZP_06662911.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B088] gi|300818861|ref|ZP_07099066.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 107-1] gi|300902212|ref|ZP_07120212.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|300924486|ref|ZP_07140455.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 182-1] gi|331668838|ref|ZP_08369686.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA271] gi|157081207|gb|ABV20915.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli E24377A] gi|190904521|gb|EDV64228.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli B7A] gi|192956215|gb|EDV86678.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli E110019] gi|209912856|dbj|BAG77930.1| putative channel protein [Escherichia coli SE11] gi|257754761|dbj|BAI26263.1| predicted channel/filament proteins [Escherichia coli O26:H11 str. 11368] gi|291323319|gb|EFE62747.1| multidrug resistance outer membrane protein mdtQ [Escherichia coli B088] gi|300405731|gb|EFJ89269.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 84-1] gi|300419295|gb|EFK02606.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 182-1] gi|300528480|gb|EFK49542.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 107-1] gi|315255349|gb|EFU35317.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 85-1] gi|320199734|gb|EFW74323.1| RND efflux system, outer membrane lipoprotein, NodT family [Escherichia coli EC4100B] gi|323152367|gb|EFZ38656.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Escherichia coli EPECa14] gi|323171790|gb|EFZ57434.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli LT-68] gi|323184238|gb|EFZ69615.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli 1357] gi|323944955|gb|EGB41020.1| outer membrane efflux protein [Escherichia coli H120] gi|324015926|gb|EGB85145.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 117-3] gi|324118021|gb|EGC11920.1| outer membrane efflux protein [Escherichia coli E1167] gi|331064032|gb|EGI35943.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA271] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|289806069|ref|ZP_06536698.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 416 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 84/437 (19%), Positives = 170/437 (38%), Gaps = 80/437 (18%) Query: 2 NILRAIFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---------- 50 + L A SL +LLAGC P+ T+ S+ ++D+ Sbjct: 5 SFLAATASLPLFILLAGCA----------PMHDTRQSLTQQTPSSHVDSSLPAALKNGWP 54 Query: 51 --KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRAD------------- 95 +WW++++D L+ L+ A+Q + + A +RI A+ +V A Sbjct: 55 DSQWWKAYHDAQLDALIDNAIQHSPDMQVAEQRIQLAEAQAKAVEAQDGPQLDFSADIER 114 Query: 96 --------LFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAY 146 + P + + TN T L + W +DL+G+ R + + + + + Sbjct: 115 QRMSAEGLMGPFAITDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAEVTARIGAVKARE 174 Query: 147 AQVDIAK---LNVISKLIPSYIDARHFKE-RISIAHQILDLYKKNIELSHLKFT---QGA 199 A+ + + + +++L + K + I H+ ++ N EL T +G Sbjct: 175 AEQEQTRQLLASGVARLYWEWQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGV 234 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNN 254 + + K + ++ + + +E + S L PA E Sbjct: 235 ETDIDASKTQQQLNDVNGKMKVIEARLSALTNTQSAALKLRQVSLPAVES---------- 284 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 +P +G L+ R D++ + S++ I AK+ YP ++L + AL Sbjct: 285 -----QLPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDAL 337 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F + L LPIFD G++ +N+ A++ + + + V++A+ +V Sbjct: 338 HLSDLFRHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVAR 397 Query: 372 ALTSINEDKKIVTKLQH 388 A + + + + K QH Sbjct: 398 AASQV---ETLAQKNQH 411 >gi|330898442|gb|EGH29861.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 172 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 22/151 (14%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK-----WWESFN 57 +++ SL + +L GC++ P+Y +P P+ Q+ G + + + + W FN Sbjct: 3 KSLISLAVTAFILGGCSLIPDYKQPEAPVA-AQYPQGPAYSPVEGAKMAAAEQGWRHFFN 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTN 115 D +L +L++ AL N + A I+A + R+DLFP S+ S S + +P ++ Sbjct: 62 DPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQSQ 121 Query: 116 STGQLD-----------SDWKIDLFGQRRHI 135 TGQ S +++DLFG+ R + Sbjct: 122 -TGQPGITSSYSATLGVSSYELDLFGRVRSL 151 >gi|150006556|ref|YP_001301300.1| outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] gi|149934980|gb|ABR41678.1| outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] Length = 430 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 128 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P IG Sbjct: 188 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFIGA 242 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 243 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 293 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 294 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLSKQY-ALQDKQDQISKEVAKAWTSL 352 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 353 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 394 >gi|254881543|ref|ZP_05254253.1| outer membrane efflux protein [Bacteroides sp. 4_3_47FAA] gi|319642928|ref|ZP_07997564.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] gi|254834336|gb|EET14645.1| outer membrane efflux protein [Bacteroides sp. 4_3_47FAA] gi|317385476|gb|EFV66419.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] Length = 430 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 128 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P IG Sbjct: 188 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFIGA 242 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 243 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 293 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 294 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLSKQY-ALQDKQDQISKEVAKAWTSL 352 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 353 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 394 >gi|260911184|ref|ZP_05917788.1| outer membrane efflux protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634714|gb|EEX52800.1| outer membrane efflux protein [Prevotella sp. oral taxon 472 str. F0295] Length = 446 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/321 (19%), Positives = 126/321 (39%), Gaps = 37/321 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 +L + A+Q N+++ + + +A+E +L +A+L PS AS S Sbjct: 26 TLKDCIDYAMQHNISLQKQRVAVKSAEEEVLHSKAELLPSVSASTSQNVNYRPWPETGEA 85 Query: 109 ----------IPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNV 156 + + N T +++ W + G R +L L ++ A+ D ++ + Sbjct: 86 RVANGSVQSSVDKVSYNGTYVINAQWTL-WNGNRNRNTIALNKLGASKAEADAMVSAATI 144 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ Y+ + E IS++ Q L+ +N E G SK L +L A+ E Sbjct: 145 QERIAQLYVQILYSSEAISVSKQALETSTQNEERGKEMLNVGKMSKADLAQLTAQRAQEE 204 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 ++ + + + + LL + + + IP + I RP Sbjct: 205 YNVLSAQSTLADFKRQLKQLLQITDSAPFEVAVPAATDEMALESIPSVSEVYGQAISWRP 264 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW----------SF 326 +++ + + +S I IA++ P+LSL S+ N+ N W Sbjct: 265 ELKAAQLAINESELSIKIARAQNLPTLSLGASMG---TNTTSMSNKEWGTQLKTNFDMGA 321 Query: 327 GPKLYLPIFDKGKIKSNIRRA 347 G L +PIFD ++ + +A Sbjct: 322 GVTLSIPIFDNRSKRTAVNKA 342 >gi|254234368|ref|ZP_04927691.1| hypothetical protein PACG_00211 [Pseudomonas aeruginosa C3719] gi|126166299|gb|EAZ51810.1| hypothetical protein PACG_00211 [Pseudomonas aeruginosa C3719] Length = 401 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 43/354 (12%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIP 110 +WW + D LN LV AL+ N + A A ++ + + +P + +++ Sbjct: 53 QWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRTEVGYGYQYGR 112 Query: 111 NLKTNS---------------TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKL 154 + + T +LD +++DL+G+ R I ++ A+ ++A A D+ ++ Sbjct: 113 DGDDQTLAEATDEDLHSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRV 172 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V S+ +Y+ A R + + + L ++ LS + G +S+L +L A + Sbjct: 173 SVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLSSELQRRRLLALRER 232 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 + +P LE R ++ ++ L G + + Q +P G L+ Sbjct: 233 TRAALPMLEAWRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGW--SLLAR 290 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLS--------------LNGSIALTHDNSFPGY 320 RPD+R E++LA + A+ +A+++LYP +S L GS AL + Sbjct: 291 RPDVRAAERRLAAADARRALAEAELYPRISFAVGAETSAVTLAGLGGSGALAY------- 343 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 + GP L ++ + + A + + VL A++EVE AL Sbjct: 344 ----AAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALA 393 >gi|260868841|ref|YP_003235243.1| putative channel/filament proteins [Escherichia coli O111:H- str. 11128] gi|257765197|dbj|BAI36692.1| predicted channel/filament proteins [Escherichia coli O111:H- str. 11128] gi|323176965|gb|EFZ62555.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli 1180] Length = 478 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 187/491 (38%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCG----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|242280085|ref|YP_002992214.1| outer membrane efflux protein [Desulfovibrio salexigens DSM 2638] gi|242122979|gb|ACS80675.1| outer membrane efflux protein [Desulfovibrio salexigens DSM 2638] Length = 474 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 81/430 (18%), Positives = 171/430 (39%), Gaps = 60/430 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADL---FPSSYASISHRFIPNLKTNS 116 +L + VK+ L+QN +I+ A + + AA+ ++ R + Y P Sbjct: 63 TLEECVKLGLKQNPSIIAARKDLLAAESDVKRQRGAFGGPVTAKYGYTHFDDTPRSGDTP 122 Query: 117 TGQLDSDWKIDL------FG-------------QRRHIESSLANLDSAYAQVDIAKLNVI 157 G D W + F QR E+SL N A+L +I Sbjct: 123 AGYQDK-WAFSINVSQPVFKGFELLSKYQKTKLQRASTEASLYN----------AELTLI 171 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 S + S++ + + + + +++ + G ++ +++ E E+ + E Sbjct: 172 SNIQTSFLTLLQGRMEVKSKQDSVARLQSQLDVIQAFYQVGLRPRVDVLQAEVELANAEQ 231 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-----PADLI 272 D+ + + ++TLL P + + Y + + Y+ ++ + AD Sbjct: 232 DLLIAKNTVDSRAARLNTLLNLPIEKKVDYSGELT-------YLSFSMTLDQCIEKAD-- 282 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--------- 323 + RPD++ K + S + IA+S YP ++ + + + P +T+ Sbjct: 283 KGRPDLKIARKAVEISEEDVTIAESGFYPDITAD--FNYSSEGGDPSVSTNKYNYRNRPD 340 Query: 324 -WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 W+ G L +F G+ + +RAE + ++ + T L A E+++ L S+ Sbjct: 341 SWNVGANLNWEVFSWGQTYYDTKRAEDNVKKIKAEFDNTRLEASYEIKDQLLSLKAAADR 400 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + + +VE ++ ++M Y+ + ++L+ + + E L A + L Sbjct: 401 IGVGRKSVEAGREGYRMAMARYQAQVSTNNEVLNAQSRLSDSEAQLIQALSDYQVALAKL 460 Query: 443 YIAIGSGYNP 452 Y+A+G NP Sbjct: 461 YVAMGD-MNP 469 >gi|77165026|ref|YP_343551.1| Outer membrane efflux protein [Nitrosococcus oceani ATCC 19707] gi|254434934|ref|ZP_05048442.1| outer membrane efflux protein [Nitrosococcus oceani AFC27] gi|76883340|gb|ABA58021.1| Outer membrane efflux protein [Nitrosococcus oceani ATCC 19707] gi|207091267|gb|EDZ68538.1| outer membrane efflux protein [Nitrosococcus oceani AFC27] Length = 445 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 56/275 (20%) Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 ++ +++ G + ++ E +E TL++ R I+ LL P Sbjct: 169 IAEIQYAAGRAGQQDALQAEVAQARLEVKAVTLDRRRREVQARINALLNRP--------- 219 Query: 250 KQSNNFQPNLYIPINIGIP---------ADL----IRNRPDIRYQEKKLADSVAKIGIAK 296 P +P+ G+P A L +R P++ ++A + A++G+A+ Sbjct: 220 -------PQTRVPLPAGLPQLTTPLPRLAQLQMTALRAHPELARIRARIAGAKAQVGLAE 272 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFGPKLYLPIFDKGKIKSNIRRAES 349 D YP + GYN+ W+ G + LP FD +S A Sbjct: 273 KDFYPDFRV-----------MAGYNSFWDDPAKRWTLGFSINLP-FDYSNKRSAALDAAR 320 Query: 350 SAQEQYITWQETVLNA--IKEVENALTSINEDKKIV-TKLQHAVELHKKSMSLSMINYRQ 406 + Q + W+ T A + E+E + ++ E++ ++ L+ L + ++ + +YR Sbjct: 321 ADLRQ-VRWRFTDREARLLGELEASRAAVEENEAVIKVYLRRLAPLAQDNLDAARADYRA 379 Query: 407 GRYSLLDILDIERATAKVEVDLSIAK----RQLAK 437 G L+++D ER + E L+ + RQLA+ Sbjct: 380 GAGPFLNVIDAERQQLRTENGLARVRADYLRQLAQ 414 >gi|161486181|ref|NP_754559.2| multidrug resistance outer membrane protein MdtQ [Escherichia coli CFT073] gi|73621215|sp|Q8FFV6|MDTQ_ECOL6 RecName: Full=Multidrug resistance outer membrane protein mdtQ; Flags: Precursor Length = 478 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 94/495 (18%), Positives = 189/495 (38%), Gaps = 79/495 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R I + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEITARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ------PNL--YIPI 263 ++ +E+DI R +++++ + Q+ + + P + +P Sbjct: 231 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKTVALPKVASQLPD 288 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGY 320 +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 289 ELGY--SLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHS 346 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + Sbjct: 347 AQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---Q 403 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQL 435 + K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 404 TLAEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQW 461 Query: 436 AKSYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 462 LDASIQLTGALGGGY 476 >gi|119355946|ref|YP_910590.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] gi|119353295|gb|ABL64166.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] Length = 441 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 85/410 (20%), Positives = 167/410 (40%), Gaps = 48/410 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR------------ 107 +L + + + + N + A E +NAA I ++ +P AS +R Sbjct: 36 TLEETIMLVKENNPALKAAAEEVNAADARIRQQKSAYYPQISASAGYRYIDPVSEMGFGG 95 Query: 108 -----FIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLA--NLDSAYAQVDIAKLNVISKL 160 F+PN N ++ + + FG RR +E LA +SA + + + ++ Sbjct: 96 SEPLQFMPN--NNYEAKISAKATLLDFG-RRGVEIDLAESGKNSAVHTLTLTRRDLSFST 152 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + + +E I + + + +K + + ++ G ++ ++ + I++ S Sbjct: 153 VELFYGILFLRESIRVEEKEITALQKAFDYTSKRYQAGTATRFDVLTTDVRIQAARSKKL 212 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 LE R N + L G L +F + P+ + A+ ++ RP+++ Sbjct: 213 NLEHQVRRNELALYRLTGIATDRPLEL----KGSFSVHPARPLESTLVAEAMKQRPEVQL 268 Query: 281 -----QEKKLADSVA-KIGIAKSDLYPSLSLNGS--IALTHDNSFPGYNTHWSFGPKLYL 332 Q KL S+A K G+ P +S S A + + + G + L Sbjct: 269 AGENEQSAKLRRSLAVKAGL------PVVSATASWGAANGYQPDIDEIRENIAAGIHIEL 322 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF ++ R E+SA+ + T + +T +VE L ++ +K + Q V Sbjct: 323 PIFTG--FRTTAERQEASARLRAATLRKLDTEEQVKTDVEETLHALETARKNILTTQSQV 380 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 +L + + Y+ G + LD+LD E + A+ E +++ Q A YV Sbjct: 381 QLANLAAEHARARYQNGIATTLDLLDTESSLAQAE----LSRLQAAYDYV 426 >gi|94967478|ref|YP_589526.1| outer membrane efflux protein [Candidatus Koribacter versatilis Ellin345] gi|94549528|gb|ABF39452.1| outer membrane efflux protein [Candidatus Koribacter versatilis Ellin345] Length = 438 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 178/414 (42%), Gaps = 71/414 (17%) Query: 60 SLNKLVKIALQQNLTILQATERI---NAAKENILSVRADLFPSSYASISHRFIPNLKTN- 115 +L++ V +AL ++ LQA + N A+E + A+L P+ +F+P Sbjct: 47 TLDEAVDLALAKS-PALQAQRTLILQNEAQE----ITANLRPNPTLGADSQFVPIFSPQD 101 Query: 116 -STGQLDSDWKID-----LF--GQRRHIESSLANLDSAY--AQVDIAKLNVISKLIPSYI 165 S LD + D LF G +R A +A AQV A+ + + ++ Sbjct: 102 FSGDYLDQAQQFDIGVGYLFERGHKRQRRLQAARDQTAVTKAQVADAERTLAFNIGQQFV 161 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + A Q L +++ +++S ++ G S+ +K++ ++ ++D+ + + Sbjct: 162 SVLLAESTLDFASQDLKSFQQTVDISETQYKAGYISEGDYLKIKLQLLQFQTDVSSARLA 221 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------------- 271 + + LGY +P++ + DL Sbjct: 222 KVQALAGLRQSLGYNT-------------------VPVDFDVAGDLAFQPLKGRVEDLQI 262 Query: 272 --IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK 329 +R RPD R + + + ++I +AK++ + +NG T+D S T S Sbjct: 263 LAMRERPDFRASQLGVTAAQSQIQLAKAN--AKVDVNG----TYDVSHVAGATSGSIFVS 316 Query: 330 LYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT-KL 386 LPIF++ G+I + R A + AQ Q +TV+ +V NA ++ ++++V + Sbjct: 317 FDLPIFNRNQGEI-ARTRYALTQAQAQEQAANDTVMT---DVLNAYEAVGSNEQVVQLYI 372 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 ++ + S +S Y++G SLLD LD ER+ V+ +A RQ SY+ Sbjct: 373 SGYLKESQDSRDISEYAYKRGAASLLDYLDAERSFRSVQ----LAYRQSLASYM 422 >gi|291532192|emb|CBL05305.1| Outer membrane protein [Megamonas hypermegale ART12/1] Length = 443 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/294 (21%), Positives = 131/294 (44%), Gaps = 32/294 (10%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y + + + + + +D + +++ + K+ G +K +++ + E+ + ++ Sbjct: 147 GYYNILQCRNLVGVNQETVDQLQAHLDTVNAKYAAGTVAKSDVLRSQVELADAKQNLVNA 206 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPA--DL-IRNRPDI 278 E ++ +++ +++ L+G P + N Q L Y ++ + DL + NRPD Sbjct: 207 ENNYDLSISSLNNLIGLPIDTKI--------NIQDELKYTKYDLSLAECMDLAMTNRPDG 258 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDK 337 K + + A + A++ P LS S + D++F S G K +FD Sbjct: 259 VAAAKAIEQAKASVKAAQAGNLPQLSAYASYTVDGDDAFNNDAAEKSEVGVKASWNLFDN 318 Query: 338 GKIKSNIRRAESS---AQE--QYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVE 391 K+ +R+AE++ AQE QY+ I+ EV A ++ +K + AV Sbjct: 319 NVTKAQVRQAEAALAKAQENAQYVN------EGIQLEVHQAYLNLLSAEKNIQTTSVAVN 372 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVE-----VDLSIAKRQLAKS 438 + +++ + Y G + +D++D A TAK D +++K QL K+ Sbjct: 373 QASEDYTIAQVRYTAGVGTNIDVMDAAVALTTAKTNYVQALYDYNVSKAQLDKA 426 >gi|193062304|ref|ZP_03043399.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli E22] gi|260844745|ref|YP_003222523.1| putative channel/filament proteins [Escherichia coli O103:H2 str. 12009] gi|192931970|gb|EDV84569.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Escherichia coli E22] gi|257759892|dbj|BAI31389.1| predicted channel/filament proteins [Escherichia coli O103:H2 str. 12009] gi|323161766|gb|EFZ47647.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli E128010] Length = 478 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VDGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAGSNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|78223716|ref|YP_385463.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] gi|78194971|gb|ABB32738.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] Length = 455 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 6/177 (3%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPKL 330 RP+++ + +LA + + +A +D P L L G H D S G W+ G +L Sbjct: 274 RPELKEIKHRLAIAGELVKVADADDKPRLDLTGKYGWRHLEVGDGS--GSGQIWTVGLQL 331 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 P+FD K + + +AES + I + + + E+ +A+ ++ E ++IV L V Sbjct: 332 SFPLFDGLKTRGKVAQAESERRSMQIDEAKLLESVALEIRDAVNAVRESEEIVKALSGTV 391 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ + ++ + G L++ D E + +L+ A+R + V+L +G Sbjct: 392 VQAERLLQMAEKGFELGVKIRLEVDDAELNLRQARGNLARARRDYLVARVNLERVMG 448 >gi|237704602|ref|ZP_04535083.1| multidrug resistance outer membrane protein MdtQ [Escherichia sp. 3_2_53FAA] gi|226900968|gb|EEH87227.1| multidrug resistance outer membrane protein MdtQ [Escherichia sp. 3_2_53FAA] Length = 508 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 93/493 (18%), Positives = 189/493 (38%), Gaps = 75/493 (15%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ + +DT+ +WW Sbjct: 41 ACFPLLL-MLAGCA----------PMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWW 89 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 90 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSA 149 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 150 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 209 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 210 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 260 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPA 269 ++ +E+DI R +++++ + L Q +S +P + +P Sbjct: 261 VEGVETDINA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPD 318 Query: 270 DL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNT 322 +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 319 ELGYSLLARRADLQAAYWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQ 378 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 379 QMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTL 435 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAK 437 K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 436 AEKNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLD 493 Query: 438 SYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 494 ASIQLTGALGGGY 506 >gi|149915800|ref|ZP_01904325.1| type I secretion outer membrane protein, TolC family, putative [Roseobacter sp. AzwK-3b] gi|149810382|gb|EDM70227.1| type I secretion outer membrane protein, TolC family, putative [Roseobacter sp. AzwK-3b] Length = 457 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 93/439 (21%), Positives = 181/439 (41%), Gaps = 85/439 (19%) Query: 40 NSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP- 98 N++NL DTL +++ ++ L L+QN +L+A A E++ + L P Sbjct: 15 NAENLA--DTLA--DAYRNSGL-------LEQNRALLRA------ADEDVAVTVSRLRPI 57 Query: 99 -SSYASISHRFIPNLKTNSTGQLDS-DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 + A+I+ F N N + +DS D I + Q + L QVD AK V Sbjct: 58 LNWSANITRNFGRNRTGNGSTSIDSTDAGIGVTAQLLLYDFGRTGL-----QVDAAKETV 112 Query: 157 IS--------------KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 +S + + ++++ R E +S+ L L ++ + + +F G ++ Sbjct: 113 LSTRETLRSIEQQVLLRAVVAFMNVRRNSEFVSLRQNNLRLLEEELRAAQDRFEVGEVTR 172 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + + E+ + S +S + + + + + EF + +Q + +P Sbjct: 173 TDVAQAESRLASAQSGLASAQGNLARAIE-----------EFTSAVGRQPGPLRTPQSLP 221 Query: 263 -INIGIPAD---LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 + G+ A +RN PDI + +A + I A + P ++LN + + S Sbjct: 222 SLAGGVDASKTVALRNHPDILKAQHDVAAAELAIKAADAATRPRVNLNARAGVEDEWSGG 281 Query: 319 GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI--------KEVE 370 Y S G ++ PI+ G++ S+ + Q + ++ V + +EV Sbjct: 282 DYVRSGSIGVEITGPIYQGGQL--------SALERQAVARRDAVRGGLLLAQLAVQQEVG 333 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ----GRYSLLDILDIERATAKVEV 426 NA + + Q AV ++ +++ R+ G + LD+LD E+A Sbjct: 334 NAYADLRAARASREASQEAV----RAATVAFRGVREEAQLGARTTLDVLDAEQA------ 383 Query: 427 DLSIAKRQLAKSYVDLYIA 445 L A+ L + +D+YIA Sbjct: 384 -LLDARTNLISAEIDVYIA 401 >gi|323968057|gb|EGB63467.1| outer membrane efflux protein [Escherichia coli M863] Length = 484 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 84/446 (18%), Positives = 169/446 (37%), Gaps = 66/446 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 38 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 86 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 87 LEYHDNQLTSLINYALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 146 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 147 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 206 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 207 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 266 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 267 ASKTRQQLNDVVGKMKIIEARLSALTNH---------QIKSLKLKPVELPKVASQLPDEL 317 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 318 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 377 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 378 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 434 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYS 410 K QH ++ + +L ++ Q R++ Sbjct: 435 KNQHQAQIERD--ALRVVGLAQARFN 458 >gi|206580355|ref|YP_002237444.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Klebsiella pneumoniae 342] gi|206569413|gb|ACI11189.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Klebsiella pneumoniae 342] Length = 479 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 89/446 (19%), Positives = 182/446 (40%), Gaps = 74/446 (16%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP------------- 98 WW+ ++D L+ L++ AL + A +RI A+ +A+L P Sbjct: 58 WWKDYHDAQLDNLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADVERQRM 117 Query: 99 ------SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA 152 +A+ + TN T L + W +DL+G+ R + A + AQV A Sbjct: 118 SAEGLMGPFATDTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVK--ARIGELKAQV--A 173 Query: 153 KLNVISKLIPSYIDARHFKERISIA------------HQILDLYKKNIELSHLKFTQGAT 200 + +L+ + +++ + A + I+ + K ++ +GA Sbjct: 174 EQAQTRELLSGSVARLYWQWQTEAAIKAVLQQVKGEQNNIVTVDKALLQRGITNSAEGAE 233 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP--- 257 + +++ K + ++ + + +E M + N Q QS +P Sbjct: 234 NDINVSKTDQQLADVAGTMKEIEARL-MALTN---------------SQSQSLTLKPVSL 277 Query: 258 ---NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---AL 311 + +P +G +L+ RPD++ + S++++ AK+ YP ++L + AL Sbjct: 278 PTVSAQLPDTLGY--ELLARRPDLQVAHWYIEASLSEVDAAKAAFYPDINLMAFLQQDAL 335 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + F L LPIFD G++ +N+ A + + + V++A+ +V Sbjct: 336 HLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIASAQNSLSIAQYNKAVVDAVNQVAK 395 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT-AKV-EVDLS 429 + + + ++ K Q ++ K + + +N Q R + IL R + AK+ + Sbjct: 396 TASQV---ETLMAKSQQQQQVEKDAQRV--VNLAQARMA-AGILPGSRVSMAKLPALQER 449 Query: 430 IAKRQLAKSYVDLYI----AIGSGYN 451 I +L ++D I A+G GY+ Sbjct: 450 ITALRLHGQWIDASIQLTSALGGGYH 475 >gi|255535455|ref|YP_003095826.1| outer membrane efflux protein [Flavobacteriaceae bacterium 3519-10] gi|255341651|gb|ACU07764.1| outer membrane efflux protein [Flavobacteriaceae bacterium 3519-10] Length = 446 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/313 (20%), Positives = 137/313 (43%), Gaps = 25/313 (7%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 ++ + +I ++ +Y ++ ++ A L + + ++ F G K+ + Sbjct: 136 AELTEEQIIERVANAYFQVYQSEQMLANAENNLKITNETGKIIKGLFDAGLARKIDFDRT 195 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ----SNNFQPNLYIPIN 264 E +I S LE + ++ + + ++G P MQ++ + F P + + Sbjct: 196 EVAKNNITSSKQQLENAVEISENALKFMIGMP-------MQQEIDLPTQTFDPTILPDSD 248 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYNTH 323 G D R ++R K++ + ++++ YP+++L+ + L N FP +N Sbjct: 249 PGSFDD----RTELRLANKQIELLEWQKKASEAEYYPTVALSANYGFLGQGNKFPWWNGE 304 Query: 324 -----WS----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 WS G + +PIF+ KS I + ++ ++E L E +NA+T Sbjct: 305 KNGVFWSDVASIGLNINVPIFNGFATKSRIELNQIEIEKAQADFREAKLGLEMEHKNAVT 364 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + + + V+L ++ ++ + NY+ G +L +ILD ERA + +L+ A+ Sbjct: 365 LLENNMTTINMQLSNVKLAEEVLANTRSNYQYGLATLNEILDAERAVTDAKNNLTRAQLD 424 Query: 435 LAKSYVDLYIAIG 447 + +DL + G Sbjct: 425 YKLAEIDLLKSQG 437 >gi|317503374|ref|ZP_07961419.1| outer membrane efflux protein [Prevotella salivae DSM 15606] gi|315665509|gb|EFV05131.1| outer membrane efflux protein [Prevotella salivae DSM 15606] Length = 447 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 82/390 (21%), Positives = 157/390 (40%), Gaps = 35/390 (8%) Query: 58 DTSLNKLVKIALQQNLTILQATERIN--AAKENILSVRADLFPS---------------- 99 D +L + ALQ N+T+ ++ R+N AAKE+I +A L PS Sbjct: 25 DWTLKACIDYALQNNITLQKS--RLNQLAAKEDIKESQAALLPSLSLGTSQNVSYNPWPE 82 Query: 100 --SYASISHRFIPNLKT---NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK- 153 SY +R ++ N L ++W + G R H + L A + +A Sbjct: 83 TSSYVVAGNRVETSVDKAYYNGGFSLSANWTV-WNGNRNHNQVKLNKFAEKQADLAVASD 141 Query: 154 LNVISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 +N +++ I ++ + E I + + L KN E G SK L +L A+ Sbjct: 142 INTLTEQITQLFVQILYSNEAIKVNQESLATSAKNEERGKEMLAVGKMSKADLAQLTAQR 201 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E I E + + + LL E + ++ + IP + + Sbjct: 202 AQDEYAIVQAESNLKEYKRQLKQLLQLTNGEAFDVVVPETTDDMALELIPNVSSVYEQAL 261 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THDNSFPGYNTHW------S 325 RP+I+ E + S I +AKS P+++++ I+ T + G++ Sbjct: 262 TTRPEIKNAELSIQSSELNIKLAKSLRMPTVAMSAGISTNTSTMNKNGWDKQMKNNFVIG 321 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G + +P+ D + K+ I +AE Q + ++ +EN N ++ + Sbjct: 322 GGINISVPLLDNRQAKTTISKAEIQRQNSMLDLKDKQTALYSTIENYWLQANNNQSMFKS 381 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + + E K+S +L +R G ++++++ Sbjct: 382 ARISTESAKESYALLSEQFRLGLKNIIELM 411 >gi|312974119|ref|ZP_07788290.1| multidrug resistance outer membrane protein mdtP [Escherichia coli 1827-70] gi|310331653|gb|EFP98909.1| multidrug resistance outer membrane protein mdtP [Escherichia coli 1827-70] Length = 358 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/330 (19%), Positives = 136/330 (41%), Gaps = 44/330 (13%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL-- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 20 LISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSG 79 Query: 70 --------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPNL 112 Q +L A ++ A +L+ V A+ F S Y+ + P L Sbjct: 80 SHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDA----PAL 135 Query: 113 K------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 136 GMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYY 195 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 196 SMQASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQ 255 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQ 281 ++ L+G A++ +P + GIPA +L+ RPD++ Sbjct: 256 ITETRESLRALIGAGASDM--------PEIRPVALPQVQTGIPATLSYELLARRPDLQAM 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + S+ ++ A++ YPS + L Sbjct: 308 RWYVQASLDQVDSARALFYPSFDIKAFFGL 337 >gi|167590527|ref|ZP_02382915.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 249 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 28/248 (11%) Query: 15 LAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK------------WWESFNDTSL 61 LAGC P P MP + ++ + + WW + +L Sbjct: 1 LAGCAWFAPSGEPPAMPSRAHYGATPQAEQTVAAQGVAQHFEVGAQPVPDWWTQYRSDAL 60 Query: 62 NKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHRF----IPNLK 113 N LV L+ + T+ A +NAA+E + + + + + PS A + R IP L Sbjct: 61 NALVDEGLRNSPTLGAAAHTLNAAREQLRAQIGSSMLPSIDAGGQAARQRALGVPIPALG 120 Query: 114 TNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYID 166 + GQL + + IDLFG R +LA +D + Q++ A+ + + ++ + + Sbjct: 121 APTLLYDTFVGQLQARYTIDLFGASRFANRALAKRVDISAFQLESARRALAANIVVASVT 180 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +I +++ L + ++ GA S+ + +++ + +P L + Sbjct: 181 SSVLGAQIDTTERLVALADAQARDAERRYALGAASRGDALNARQSAETVAAGLPALRQQR 240 Query: 227 RMNVHNIS 234 H ++ Sbjct: 241 DSARHALA 248 >gi|261381344|ref|ZP_05985917.1| putative outer membrane multidrug resistance lipoprotein [Neisseria subflava NJ9703] gi|284795704|gb|EFC51051.1| putative outer membrane multidrug resistance lipoprotein [Neisseria subflava NJ9703] Length = 468 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 84/421 (19%), Positives = 162/421 (38%), Gaps = 30/421 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW D LN L+ A+Q + + R A+ + V A P ++ Sbjct: 51 WWMKLKDKKLNNLIASAIQTSTNLRVVKARFEQAQAQLGVVGAANKPQVGLGVTGIGTYV 110 Query: 112 LKTNSTGQLDSDWKI-------------DLFGQ-RRHIESSLANLDSAYAQVDIAKLNVI 157 G +D+D + D +G+ R I++ L +A + + + Sbjct: 111 SPKPQAGMVDTDHTLVLAHAALQGSLVFDFWGKNREQIQAVLGKSRAAVYEAHHIRTELA 170 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + Y + E++++ ++L K ++L + +L LE + ++ Sbjct: 171 HAVAAQYFAWQMATEQLALLDTRIELADKALKLMQQRVKAQLAPADALHALEMAQQQLQ- 229 Query: 218 DIPTLEKSFRMN----VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 LEKS + N +L L+ + P+ P++ I ADL+ Sbjct: 230 ----LEKSAWTQKNEKIRNSLAVLTGRVPGVLNGQIPEKMAAVPS--SPVSR-IEADLLA 282 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP--GYNTHWSFG--PK 329 RPDI Q+ L + + +++ YP++ L +TH ++F T G P Sbjct: 283 ARPDIAAQKALLEEKWHIVKSTEAEFYPNIELKVLAGMTHIDAFNLIRGRTSGMLGIVPA 342 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LP+F G ++S + + EQ + +TVLNA++ +A+ K Sbjct: 343 LNLPLFTSGALQSKLAGKRAQYNEQVAVYDQTVLNAMRSAADAVVDYQSLKSRQDTWNKM 402 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 V + KS+ + R G + L L + A+ ++ + ++ +L +G G Sbjct: 403 VNIADKSVQNAKGRVRAGLDNGLTALQKQDEAARTKMSAVQYHAEYLTAWSNLNAQLGGG 462 Query: 450 Y 450 + Sbjct: 463 F 463 >gi|227540263|ref|ZP_03970312.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33300] gi|227239907|gb|EEI89922.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33300] Length = 452 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 90/425 (21%), Positives = 178/425 (41%), Gaps = 51/425 (12%) Query: 44 LINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---- 99 L++I L + + +L + ++ ALQ ++ + A+ I VR++ P Sbjct: 18 LLSIGILGSAHAQEELTLKEAIQYALQNKADAKKSKLDVINAENKISEVRSNALPQINLS 77 Query: 100 ---SYASISHRF-IPNLKTNSTG----QLDSDWKI--------DLFGQRRHIESSLANLD 143 +Y I + +P+ + G ++ W+ +F Q AN Sbjct: 78 AGLTYNPIIQKIALPDFTGQTGGTTLVEMGQKWQATPTVSLTQQIFNQSVFTGLKAANTT 137 Query: 144 SAYAQV--DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 A+ QV ++ + +I ++ SY D K ++ L +K ++ ++ G Sbjct: 138 RAFYQVNHEMTEEQLIERVANSYYDVYQAKMQLETIESNLKSTRKTRDVIFGSYSNGLAK 197 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 K+ L + + + ++ES ++ + + ++G + + M K + F +L I Sbjct: 198 KIDLDRTDVAVNNLESSKLQKMNEIQLKENALKFVIGMDVNKDIQ-MPKST--FNIDLKI 254 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPGY 320 + + NR +I+ + +V ++ YP+LSL S FP Sbjct: 255 A---NLDTAQLDNRTEIKLLATQRELNVFNKKSIEAQYYPTLSLQASYGYAGFGQKFPLV 311 Query: 321 NTH--W----SFGPKLYLPIFDKGKIKSNIRRAE-------SSAQEQYITWQETVLNAIK 367 N + W S G L PIF+ +S +R+A+ ++ ++ NA K Sbjct: 312 NNNGVWANFASIGVNLSFPIFNGFSTRSKVRQAQIDIDKLDVDISDKKLSLMTDANNAQK 371 Query: 368 EVENALTSINEDKKIVTKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +++N+L +IN +Q A +EL K+ +S NY+ G +L D+LD E+A A+ + Sbjct: 372 QLKNSLLNIN--------MQQANMELAKEVLSNVENNYKNGLATLTDLLDAEKAYAEAQN 423 Query: 427 DLSIA 431 + S A Sbjct: 424 NHSTA 428 >gi|171317816|ref|ZP_02906996.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] gi|171097040|gb|EDT41897.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MEX-5] Length = 158 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 54/96 (56%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS G + P+F+ GK+K+ + A++ ++++TVL A +EV+NA+T ++ + Sbjct: 6 WSLGASVSQPLFEGGKLKAGVDFAQAGYVAAQASYRQTVLTAFQEVQNAVTGLSVLAQAA 65 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + AV+ +K +SL+ Y G +D+L ++ Sbjct: 66 QQASAAVDDARKLVSLAQDRYTGGLTPFIDVLTAQQ 101 >gi|293372969|ref|ZP_06619338.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] gi|292632037|gb|EFF50646.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] Length = 463 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTLK + L + A +QN+TI + RI AA ++ + +A LFPS Sbjct: 28 LQVDTLKETKIPAQWDLQSCIDYAKEQNITIRK--NRITAASTQIDVKTAKAALFPSLSF 85 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S + + N KT+ G L++ W + G +R L Sbjct: 86 STSQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 144 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 145 NNQVAELDVATSENNIQESIAQVYIQILYAAESVKVNESTLQVSIAQRDRGQELLNAGSI 204 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K +LEA++ + + T + +TL Y N N+Y Sbjct: 205 AKSDFAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 252 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P ++ RP+I + + S IGIAKS P++SL+ Sbjct: 253 LPALSDENVLAPLPTKKDVYIRALSLRPEIEASKLNVEASELGIGIAKSSYLPTISLSAG 312 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 313 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 359 >gi|255611843|ref|XP_002539347.1| conserved hypothetical protein [Ricinus communis] gi|223506926|gb|EEF23036.1| conserved hypothetical protein [Ricinus communis] Length = 243 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/231 (22%), Positives = 109/231 (47%), Gaps = 24/231 (10%) Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--------SHRFIP-----N 111 +++ALQ+N ++ QA +R+ A + A L P S+ + F P + Sbjct: 1 MQLALQENPSLTQAAKRVEKAAAYASAAGAALKPQVTGSVDVSRQRLSENAFYPPPYGGS 60 Query: 112 LKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 +T + G L++ W +D +G+ R ++++L +++A+A+ AKL + + + +Y Sbjct: 61 WQTIADGSLNAAWDLDFWGRNRSALQAALTQVEAAHAEQAAAKLLLTTNVARAYSQLSSG 120 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 E+ ++A Q + ++ ++L + G + L L + E+++ + I TLE+ + Sbjct: 121 LEQFALAQQAMKQRQQELDLIRQRVENGLDTNLELRQGESQVAAAREQIETLEEKIGLAR 180 Query: 231 HNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + ++ L A + ++ +P IPADLI RPD+ Sbjct: 181 NALAALTAQDAESLKSLKPALSQREIQAEP-------AAIPADLIGRRPDL 224 >gi|300772182|ref|ZP_07082052.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760485|gb|EFK57311.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33861] Length = 422 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 90/407 (22%), Positives = 175/407 (42%), Gaps = 52/407 (12%) Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FIPNLKTN 115 L NL +L +I ++ IL +A L+P+ SIS I N N Sbjct: 37 LSSNLELLAGKYKIEQSRAAIL--QAKLWPNPTFSISEVNLWKNNPVETMSPLIGNWGRN 94 Query: 116 STGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L+ + I+ G+R+ + NL + + + N+ L S I+ + + + Sbjct: 95 QQVALELEQLIETAGKRKKRVRLEQLNLKNQELEFEETLRNLKFDLRESVIELQKLQGQE 154 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 S+ +L++ E ++ QG S++ V++ +E+ S E+++ + S + I Sbjct: 155 SLYQSQFELFRNLSEAFEKQWKQGNVSEMEYVRIHSEMLSFENELAEIRASKIDLIKKIK 214 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR-------NRPDIRYQEKKLAD 287 T E + +N Q N Y+ IP DL+R NR D R +L Sbjct: 215 TYSNVEGPESIVL----ANALQINTYV-----IP-DLLRWKETALENRADFRMASNQLDI 264 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S ++ I K++ P++ L +L +D N P + G + LP+F++ + NI Sbjct: 265 SRQQLVIEKAERKPNVQL----SLGYDRGGNVMPDF---IGLGASIELPVFNRN--QGNI 315 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM--- 401 R A+ ++ + L + E++ + + + ++I+ KL A + K + LS+ Sbjct: 316 RIAQLEIEKSTTELTQNKLMIVNEIDATVQRLVQLQRILEKLSGAFD---KQLDLSLEKY 372 Query: 402 -INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 N++ S+++ +D + + + +L K Q K+ +L IG Sbjct: 373 TRNFQNRNISVMEFVDFVSSYLENKKNLIDRKEQYLKTIEELQYVIG 419 >gi|255066515|ref|ZP_05318370.1| TolC protein [Neisseria sicca ATCC 29256] gi|255049395|gb|EET44859.1| TolC protein [Neisseria sicca ATCC 29256] Length = 289 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/228 (21%), Positives = 92/228 (40%), Gaps = 39/228 (17%) Query: 46 NIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------ 99 + D WW+ +ND L+ L+ L Q + A R+N A+ RADL P+ Sbjct: 46 DADIGAWWQQWNDPVLSGLIAQGLAQGHDVKIAVSRLNEARAVAGVARADLGPTVGLSGK 105 Query: 100 ------------------------SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI 135 +S++ I + T+ G L + W+ D+FG++R Sbjct: 106 VGANYSKMDNPLDSNARALLSRYPQASSLNGDTIESTGTSMYGGLTASWEPDIFGKKRSD 165 Query: 136 E-----SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++L + AY A++ V + +Y AR + R+ A Q + ++ + Sbjct: 166 ADAARYAALGQQELAYG----AQMLVAGDIADNYFKARAAQGRLKTADQTVATLRRMVRY 221 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 +F G S + + + ++ + E+ T+ + V +I+ L G Sbjct: 222 IEGRFKAGHVSGYEVNEAKVQLTAAEAKRATIGAEYAAYVRSIAVLTG 269 >gi|253565151|ref|ZP_04842607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251946616|gb|EES86993.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 459 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 92/440 (20%), Positives = 180/440 (40%), Gaps = 59/440 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISH 106 SL + ++AL+ N + + ++ + S + + FP+ AS I+ Sbjct: 27 SLQECREMALKYNKEMAASIKQTESTHYTAKSYKGNFFPNFTASGTGLYSNADGSYGIAG 86 Query: 107 RFIPNLKTNSTGQL------------DSDWKID-------------LFGQRRHIESSLAN 141 +P ++TGQL + D+KI G + ++ Sbjct: 87 GNLPTFLPDATGQLIPNGGFAYFPGINLDYKIGWVYMGGIQLEQPLYMGGKITAAYKMSV 146 Query: 142 LDSAYAQVD--IAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFT 196 L AQ++ + VI K +Y + A+ K H +L KKN+E + + Sbjct: 147 LGKQMAQMNETLTATEVILKTDQAYALVVKAKEMKVVADAYHTVLTELKKNVESA---YK 203 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G + ++K++ + E + E +FR+ N+ L+G P T +H S NF Sbjct: 204 HGLKPQNDVLKVQVRLNESELAVRKAENAFRLATMNLCHLIGKPLTADIHV----SGNF- 258 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--- 313 P + + I + I RP+ +K++A + ++ + +S+L P + + GS H Sbjct: 259 PEIEQGLEIQVLD--ITARPEYTILDKQVAIAKQQVKLNRSELLPKIGIKGSYDYVHGLE 316 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D +F N +S + +P+F G+ + +R A++ ++ + Q + E+ Sbjct: 317 LNDKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQSLNELMLLELTR 375 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A +++E K +++ +++ +S Y G +L D L+ + + A Sbjct: 376 AANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDHLEGQALWQQAYETKVNA 435 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 QL +YV A G YN Sbjct: 436 HFQLYLNYVAYLKAAGILYN 455 >gi|331683816|ref|ZP_08384412.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli H299] gi|331078768|gb|EGI49970.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli H299] Length = 478 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 90/491 (18%), Positives = 185/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +L GC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLTGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD- 270 + + ++ +S L + Q +S +P + +P + Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDEQ 290 Query: 271 ---LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|254446171|ref|ZP_05059647.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198260479|gb|EDY84787.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 502 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 77/384 (20%), Positives = 165/384 (42%), Gaps = 36/384 (9%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L ++ AL+ N I A E I + I+ V++ P+ + S+R + +++ G L Sbjct: 89 LQTTLEFALEHNFAIQTALETIREQEGLIVEVKSRALPTLALNSSYRQLDEGLSDTGGGL 148 Query: 121 ----DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA------RHF 170 W I L ++ E + +A D+ + + + L + +DA R++ Sbjct: 149 FPATTESWSITLSARQALYEG--GGIQAALDVQDLLRESALLSLESTILDALLEVRTRYY 206 Query: 171 -----KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +++I + Q + L ++ + + L+ G S +++ E + + + + + Sbjct: 207 AAILSRDQIGVEEQNVQLLEETLANAKLRREAGDVSDFEVLRAEVLLANAQPALIRRRGA 266 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSN-NFQPNL-----YIPINIGIPADL---IRNRP 276 +R+++ + +GY +Y + N N P L Y PI+ + L + R Sbjct: 267 YRVSIEQLRQSMGYQ-----NYRRDSLNLNRVPELTDTLVYEPIDYDLETGLQTALAERA 321 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTHWSFGPKLYLP 333 +++ A + IA S PS+ L G+ N +F W+ G + Sbjct: 322 ELKQLAAITKAREAGLKIADSGRRPSVDLVGTYGKQRSNFSSAFDDAPEGWTIGIEASWN 381 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVEL 392 I+D K + +A S ++ I QE++ AI+ +V A++++ E ++ VE Sbjct: 382 IWDGNKTRGQKLQALSQLEQSRIQ-QESLRLAIEVQVRQAISALQEADQLAQAAVKVVEQ 440 Query: 393 HKKSMSLSMINYRQGRYSLLDILD 416 ++++ ++ + G S LD+L+ Sbjct: 441 AEEALRMADSRFTTGSISQLDVLE 464 >gi|160885960|ref|ZP_02066963.1| hypothetical protein BACOVA_03965 [Bacteroides ovatus ATCC 8483] gi|156108773|gb|EDO10518.1| hypothetical protein BACOVA_03965 [Bacteroides ovatus ATCC 8483] Length = 465 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTLK + L + A +QN+TI + RI AA ++ + +A LFPS Sbjct: 30 LQVDTLKETKIPAQWDLQSCIDYAKEQNITIRK--NRITAASTQIDVKTAKAALFPSLSF 87 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S + + N KT+ G L++ W + G +R L Sbjct: 88 STSQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 147 NNQVAELDVATSENNIQESIAQVYIQILYAAESVKVNESTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDFAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P ++ RP+I + + S IGIAKS P++SL+ Sbjct: 255 LPALSDENVLAPLPTKKDVYISALSLRPEIEASKLNVEASELGIGIAKSSYLPTISLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|83749672|ref|ZP_00946653.1| Hypothetical Protein RRSL_00360 [Ralstonia solanacearum UW551] gi|207743357|ref|YP_002259749.1| outer membrane efflux protein (partial sequence c terminus) [Ralstonia solanacearum IPO1609] gi|83723674|gb|EAP70871.1| Hypothetical Protein RRSL_00360 [Ralstonia solanacearum UW551] gi|206594754|emb|CAQ61681.1| probable outer membrane efflux protein (partial sequence c terminus) [Ralstonia solanacearum IPO1609] Length = 186 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Query: 294 IAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +AK+ P +SL + L +N G GP L LPIF+ GK+++N+R + Sbjct: 1 MAKAQFLPDISLTAFLGLASIAPENLLLGNARQLGIGPALRLPIFEGGKLRANLRGKYAG 60 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ +T+ A+ + + +TS++ + + A+ +++ SL+ Y G + Sbjct: 61 YDAAVASYNQTLTEALHDTADQITSLHSVDTQIDIQRTALAEAERAYSLARTRYGAGLGT 120 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 L +L+ E + ++ + + + + L A+G GY Sbjct: 121 QLTVLNAESTVLQQRRLAALLQARRLDAQMALIKALGGGYT 161 >gi|327253265|gb|EGE64919.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Escherichia coli STEC_7v] Length = 457 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 84/446 (18%), Positives = 169/446 (37%), Gaps = 66/446 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINYALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q +S +P + +P +L Sbjct: 240 ASKTRQQLNDVVGKMKIIEARLSALTNH---------QIKSLKLKPVELPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYS 410 K QH ++ + +L ++ Q R++ Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFN 431 >gi|301058179|ref|ZP_07199230.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447718|gb|EFK11432.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 140 Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 17 GCTVGPEYTKPHMPLLPT-QFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTI 75 GC +GP++ +P + +F ++ +IN LKWWE FND L LV AL N + Sbjct: 23 GCAMGPDFMRPVVETPKNYRFEKVPAEKMIN---LKWWELFNDPVLYALVNQALSNNKDL 79 Query: 76 LQATERINAAKENILSVRADLFPSSY 101 A R+ A+ + RAD +P Y Sbjct: 80 KIAAARVEQARAYVGFTRADQYPGFY 105 >gi|265752014|ref|ZP_06087807.1| outer membrane efflux protein [Bacteroides sp. 3_1_33FAA] gi|263236806|gb|EEZ22276.1| outer membrane efflux protein [Bacteroides sp. 3_1_33FAA] Length = 417 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 115 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 174 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P +G Sbjct: 175 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFVGA 229 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 230 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 280 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 281 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLGKQY-ALQDKQDQISKEVAKAWTSL 339 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 340 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 381 >gi|212691265|ref|ZP_03299393.1| hypothetical protein BACDOR_00756 [Bacteroides dorei DSM 17855] gi|212666497|gb|EEB27069.1| hypothetical protein BACDOR_00756 [Bacteroides dorei DSM 17855] Length = 430 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 128 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P +G Sbjct: 188 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFVGA 242 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 243 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 293 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 294 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLGKQY-ALQDKQDQISKEVAKAWTSL 352 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 353 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 394 >gi|223937829|ref|ZP_03629729.1| outer membrane efflux protein [bacterium Ellin514] gi|223893435|gb|EEF59896.1| outer membrane efflux protein [bacterium Ellin514] Length = 527 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/321 (21%), Positives = 144/321 (44%), Gaps = 37/321 (11%) Query: 113 KTNSTGQLDSD-WKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +T T QLD + K D R+ I ++ ++ +AY ++ A+ NV R + Sbjct: 189 QTRFTIQLDKNALKFDEQALRQQIMKTVTDVQTAYYELIFARENV-----------RVNQ 237 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E + +A Q++ K +E+ GA + L + E++ S E+D+ T ++ + + Sbjct: 238 EALKLAQQLVSENLKRVEV-------GALAPLDEKQSESQAASSEADLLTALQTQGTDEN 290 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD---LIRNRPDIRYQEKKLADS 288 N+ +L+ E+++ + + P + + NRPDI Q L + Sbjct: 291 NLKSLITDNYGEWVNVTPVPAESLTAT---PQQFDLQESWRSALENRPDILQQRLTLDKN 347 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGY--------NTHWSFGPKLYLPIFDKGK 339 + + L+P+L+L GS SF G N +++G + +P+ + G Sbjct: 348 NITVKYDFNQLFPTLNLQGSYGRNALAGSFTGILGDVREEKNPFYTYGVVVSMPLGN-GA 406 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH-KKSMS 398 ++N R A+++ Q+Q + + T AI VEN + + D + + K +HA ++ K ++ Sbjct: 407 ARNNYRIAKATVQQQLLALKRTEQLAIVTVENDVGQLRADLQTI-KARHAATVYAKDALE 465 Query: 399 LSMINYRQGRYSLLDILDIER 419 G+ + +L +++ Sbjct: 466 AEQKKLENGKSTSFQVLQLQK 486 >gi|237712305|ref|ZP_04542786.1| outer membrane efflux protein [Bacteroides sp. 9_1_42FAA] gi|237726444|ref|ZP_04556925.1| outer membrane efflux protein [Bacteroides sp. D4] gi|229434970|gb|EEO45047.1| outer membrane efflux protein [Bacteroides dorei 5_1_36/D4] gi|229453626|gb|EEO59347.1| outer membrane efflux protein [Bacteroides sp. 9_1_42FAA] Length = 430 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 27/282 (9%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD+ N+I SY KE Q + + ++ ++ K+ G SK L+++ Sbjct: 128 VDLTTDNIIYAAEASYWGTAAQKEMYETMCQYVQIIEQLTKVLQDKYDDGYISKTDLIQM 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIG- 266 + +K E + +S+++ + N++ L+G P E +++ L +P +G Sbjct: 188 QTRLKEAELQRSSSYQSYQVALQNMNVLMGLEPLAEM-----DLTDSISTILPMPAFVGA 242 Query: 267 -----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + D ++ D+ YQ+++++ + AK PSLS+ T + Sbjct: 243 ETALNVRPDYAISQLDVDYQKRQVSLAAAKYN-------PSLSIG--FKETWGTQMLNIS 293 Query: 322 THWSFGPKLY----LPIFDKG-KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 F +Y LPIF G + KS + +QY Q+ KEV A TS+ Sbjct: 294 GETMFNSNVYASIKLPIFHWGARFKSTAAQKAILLGKQY-ALQDKQDQISKEVAKAWTSL 352 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E+ + ++ + +L ++++ L+ +Y +G+ ++LD+L + Sbjct: 353 TENTRQISIAEENCKLAEENLDLNTFSYTEGKLTILDVLSAQ 394 >gi|299145348|ref|ZP_07038416.1| outer membrane efflux protein [Bacteroides sp. 3_1_23] gi|298515839|gb|EFI39720.1| outer membrane efflux protein [Bacteroides sp. 3_1_23] Length = 465 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTLK + L + A +QN+TI + RI AA ++ + +A LFPS Sbjct: 30 LQVDTLKETKIPAQWDLQSCIDYAKEQNITIRK--NRITAASTQIDVKTAKAALFPSLSF 87 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S + + N KT+ G L++ W + G +R L Sbjct: 88 STSQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 147 NNQVAELDVATSENNIQESIAQVYIQILYAAESVKVNESTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDFAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P ++ RP+I + + S IGIAKS P++SL+ Sbjct: 255 LPALSDENVLAPLPTKKDVYISALSLRPEIEASKLNVEASELGIGIAKSSYLPTISLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|301632531|ref|XP_002945336.1| PREDICTED: alkaline protease secretion protein AprF-like [Xenopus (Silurana) tropicalis] Length = 445 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 58/299 (19%), Positives = 142/299 (47%), Gaps = 15/299 (5%) Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 ++ A A ++ + + ++++ +Y++A ++ +++AH+ + ++ + F GA + Sbjct: 132 IEDAEATLEREEQELATRVVAAYMEALLAQDALTLAHKKQSVTATQLDAAQKTFAAGAGT 191 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + + + +A + E+++ + + + + L+ P L + S P L Sbjct: 192 RTDMDEAQARLDMDEANVVSARQQVELAQRQLEILISQPVG-ALAVVDTASLPLLPPLPA 250 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFPG 319 +N + A + P++R + ++ + A++ A+ YPSL I + + + + PG Sbjct: 251 SVNDWV-AQAEAHSPEVRALQARVDTAQAEVAKAQGAHYPSLDAVVQINRSASENITSPG 309 Query: 320 -YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE-----VENAL 373 +T+ G +L +P++ G +S++R+A + + + QE L A++ V Sbjct: 310 TRSTNRMVGLQLNIPLYSGGYTQSSVRQAVA----ETLRAQEN-LEAVRRDLAVRVHREY 364 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 ++E V L+ A ++ + S ++ G S+LD+L+ E+ V+ DL+ A+ Sbjct: 365 RGVSEGVLKVRALEQAQRSGRQLVQSSRRSHEVGLRSMLDVLNAEQHLQSVQRDLAEAR 423 >gi|269797588|ref|YP_003311488.1| outer membrane efflux protein [Veillonella parvula DSM 2008] gi|269094217|gb|ACZ24208.1| outer membrane efflux protein [Veillonella parvula DSM 2008] Length = 486 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 74/381 (19%), Positives = 155/381 (40%), Gaps = 49/381 (12%) Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTG--- 118 + V +AL N T Q AAK + V A PS SY + + + + +G Sbjct: 71 RTVDLALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYGWSAQKTGGDTGSGKSGSHN 130 Query: 119 ----------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 QLD+ ID R E + A+ + A Q LN LI S Sbjct: 131 FSISAPVFNPQLDAS--ID--SARYTREGTGASYEEALQQAKYDALNGYYTLIMS----- 181 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +A Q + Y+ ++ ++ G + ++ + + ++ + + + + Sbjct: 182 --RNMVDVAQQAVKDYQGHVTNVEAQYNVGLVASSDVLAAKTNLDDSQTSLVKAQNAANL 239 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP----------ADLIRNRPDI 278 N++ ++ YPA + ++ + Q Y P N+ + + L+++ D+ Sbjct: 240 AEANLNQVIAYPAQTAITTAER---DLQ---YKPYNVTLEQAKAYAMLHRSALVKSALDV 293 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDK 337 + E+ + AK+ P++++ + + G +T WS G ++D Sbjct: 294 KSAEEAVKS-------AKAGYLPTVAVKAGRGYGDPDGYFGTSTKSWSVGASATWNLWDG 346 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G ++ I++A + ++ TV + V+ A ++ ++ + Q AV ++S Sbjct: 347 GATQNAIKKANAQLEQAKEANLATVDAVLLAVQKAYLNLRAAEQTIQSTQTAVAQGQESF 406 Query: 398 SLSMINYRQGRYSLLDILDIE 418 ++ + YR G + LD+LD E Sbjct: 407 RIATLRYRAGVGTNLDVLDAE 427 >gi|282850036|ref|ZP_06259418.1| outer membrane efflux protein [Veillonella parvula ATCC 17745] gi|282580225|gb|EFB85626.1| outer membrane efflux protein [Veillonella parvula ATCC 17745] Length = 486 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 76/378 (20%), Positives = 155/378 (41%), Gaps = 43/378 (11%) Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTG--- 118 + V +AL N T Q AAK + V A PS SY + + + + +G Sbjct: 71 RTVDLALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYGWSAQKTGGDTGSGKSGSHN 130 Query: 119 ----------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 QLD+ ID R E + A+ + A Q LN LI S Sbjct: 131 FSISAPVFNPQLDAS--ID--SARYTREGTGASYEEALQQAKYDALNGYYTLIMS----- 181 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +A Q + Y+ ++ ++ G + ++ + + ++ + + + + Sbjct: 182 --RNMVDVAQQAVKDYQGHVTNVEAQYNVGLVASSDVLAAKTNLDDSQTSLVKAQNAANL 239 Query: 229 NVHNISTLLGYPA----TEFLHYMQKQSNNF---QPNLYIPINIGIPADLIRNRPDIRYQ 281 N++ ++ YPA T H +Q + N Q Y ++ + L+++ D++ Sbjct: 240 AEANLNQVIAYPAQTAITTAEHDLQYKPYNVTLEQAKAYAMLH---RSALVKSALDVKSA 296 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 E+ + AK+ P++++ + + G +T WS G ++D G Sbjct: 297 EEAVKS-------AKAGYLPTVAVKAGRGYGDPDGYFGTSTKSWSVGASATWNLWDGGAT 349 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ I++A + ++ TV + V+ A ++ ++ + Q AV ++S ++ Sbjct: 350 QNAIKKANAQLEQAKEANLATVDAVLLAVQKAYLNLRAAEQTIQSTQTAVAQGQESFRIA 409 Query: 401 MINYRQGRYSLLDILDIE 418 + YR G + LD+LD E Sbjct: 410 TLRYRAGVGTNLDVLDAE 427 >gi|85703402|ref|ZP_01034506.1| type I secretion outer membrane protein, TolC family protein [Roseovarius sp. 217] gi|85672330|gb|EAQ27187.1| type I secretion outer membrane protein, TolC family protein [Roseovarius sp. 217] Length = 468 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 56/290 (19%), Positives = 116/290 (40%), Gaps = 24/290 (8%) Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y++ +E +++ L L ++ + + +F G ++ + + E+ + +S + Sbjct: 142 VQAYMNVIRNQEFVALRQNNLRLLREELRAAQDRFDVGEVTRTDVAQAESAVALAQSGLA 201 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-----IRNR 275 + + EF + + Q +P +G D +R Sbjct: 202 AAQGDLTSAIE-----------EFREAVGRDPGPLQTPGDLP-QLGENVDAAKAVAVRRH 249 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PDI + +A + I A++ L P+++L I + D P + S G +L PI+ Sbjct: 250 PDILQAQHNVAAAELNIRAAEAALMPTVNLTARIGASEDLDGPDMSRTGSVGVELRGPIY 309 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G++ S R+A + Q L ++V N+ ++ + T + AV + Sbjct: 310 QGGRLNSAQRQAMAQRDSQLAQLHLAGLQVKQDVGNSYANLRAARASRTASREAVRAAQV 369 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + G + LD+LD E+ DL A+ L + D+ IA Sbjct: 370 AFEGTREEATLGARTTLDVLDSEQ-------DLLDAQANLISANADVVIA 412 >gi|237716249|ref|ZP_04546730.1| outer membrane efflux protein [Bacteroides sp. D1] gi|294807674|ref|ZP_06766467.1| type I secretion outer membrane protein, TolC family [Bacteroides xylanisolvens SD CC 1b] gi|229443896|gb|EEO49687.1| outer membrane efflux protein [Bacteroides sp. D1] gi|294445110|gb|EFG13784.1| type I secretion outer membrane protein, TolC family [Bacteroides xylanisolvens SD CC 1b] Length = 463 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 141/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPS--- 99 + +DTLK + + L + A +QN+TI + RI A ++ + +A LFPS Sbjct: 28 LQVDTLKETKIPDQWDLQSCIDYAKEQNITIRK--NRITAVSTQIDVKTAKAALFPSLSF 85 Query: 100 ---------------SYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S S N KT+ G L++ W + G +R L Sbjct: 86 STGQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 144 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 145 NNQMAELDVATSENNIQESIAQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSI 204 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K L +LEA++ + + T + +TL Y N N+Y Sbjct: 205 AKSDLAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 252 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS +P++SL+ Sbjct: 253 LPALSDENVLAPLPTKRDVYISALSLRPEIEASKLNVEASELGINIAKSSYFPTISLSAG 312 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 313 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 359 >gi|282880696|ref|ZP_06289398.1| outer membrane efflux protein [Prevotella timonensis CRIS 5C-B1] gi|281305422|gb|EFA97480.1| outer membrane efflux protein [Prevotella timonensis CRIS 5C-B1] Length = 445 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 68/317 (21%), Positives = 129/317 (40%), Gaps = 31/317 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTN 115 SL + AL N+++ + T + +A+E+ +A L PS S ++++R P + Sbjct: 27 SLKDCIHYALTHNISLQKKTLQHLSAQEDTKQSQAALLPSLAVSSSQNLTYRPWPQTGIS 86 Query: 116 STG---------------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--NVIS 158 + G ++S+W + G+ RH L L +D A++ +I Sbjct: 87 TGGYMQASVDKVYYNGSYSINSNWTVWNGGKNRHT-IKLNKLLEQQTALDSAEMANKLIE 145 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ + KE +++ IL+ K+N S+ + +L A+ + E + Sbjct: 146 QIAQLYVQILYSKEAVAVNQSILETSKQNETRGEEFLKVQKMSRADMAQLTAQRAADEYN 205 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + E + R + LL TE + + N IP I + NRP+I Sbjct: 206 VIEAENNLRNYKRQLKELLQIIDTEEFDVLPPRQIEIVENQAIPSVSEIYTTALNNRPEI 265 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--------NTHWSFGPKL 330 R + S + IAK+ P+L ++ + T S Y N G + Sbjct: 266 RNAALGIESSNLSVRIAKAGKLPTLGVSAGVG-TSTTSMSNYEWGKQIKNNFDIGAGISI 324 Query: 331 YLPIFDKGKIKSNIRRA 347 +P+FD + K+ + +A Sbjct: 325 NIPLFDNRQTKTAVNKA 341 >gi|333001273|gb|EGK20841.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein [Shigella flexneri VA-6] Length = 478 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 94/491 (19%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ +V P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VDGMETDINASKTRQQLNDVVGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IRLTGALGGGY 476 >gi|262407854|ref|ZP_06084402.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|262354662|gb|EEZ03754.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 465 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 141/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPS--- 99 + +DTLK + + L + A +QN+TI + RI A ++ + +A LFPS Sbjct: 30 LQVDTLKETKIPDQWDLQSCIDYAKEQNITIRK--NRITAVSTQIDVKTAKAALFPSLSF 87 Query: 100 ---------------SYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S S N KT+ G L++ W + G +R L Sbjct: 88 STGQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A + N+ + YI + E + + L + + G+ Sbjct: 147 NNQMAELDVATSENNIQESIAQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K L +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDLAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS +P++SL+ Sbjct: 255 LPALSDENVLAPLPTKRDVYISALSLRPEIEASKLNVEASELGINIAKSSYFPTISLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|301429536|dbj|BAJ12147.1| toluene efflux pump outer membrane protein-like protein [Pseudomonas putida] Length = 120 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 3/104 (2%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLY 331 RPDI E L + A IG A++ +PS+SL G+++ F G + W F P++ Sbjct: 3 RPDILQAEYNLKAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQIN 62 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 LPIF+ G +++++ ++ +++++ A +EV + L + Sbjct: 63 LPIFNAGSLRASLDYSKIQKDIGVANYEKSIQTAFQEVADGLAA 106 >gi|298530180|ref|ZP_07017582.1| outer membrane efflux protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509554|gb|EFI33458.1| outer membrane efflux protein [Desulfonatronospira thiodismutans ASO3-1] Length = 439 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 79/424 (18%), Positives = 164/424 (38%), Gaps = 52/424 (12%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-----SYASISHRFIPNLKTN 115 + VK+ L++N ++ E++ + S R PS Y + R + T Sbjct: 22 MEAAVKMGLERNQSLQAVREQVKGREYGTKSARGAFGPSLSSSYGYTRLDERPESRVPTG 81 Query: 116 ST--------GQLDSDWKIDL---------FGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 G D W++++ F E S + + +Q+ A+L ++ Sbjct: 82 DPQEPFRTRHGSRDR-WELNINIHQPLFTGFNLLSTYEKSKLAHEQSKSQLSRAELELVL 140 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT-------SKLSLVKLEAE 211 ++ S++D +E + +A L ++++S + G +K+ + + E E Sbjct: 141 EIQTSFLDLLAARESVRVAEDSLTRLNSHLDVSRSFYDVGLVPRQHVLEAKVDVSEAEQE 200 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + S + + TLE M LLG P + Y + ++P + + Sbjct: 201 LISARNRVDTLESRLNM-------LLGLPRNMEVVYEGRLE-------FVPFTLDLDESR 246 Query: 272 IR---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-----SFPGYNTH 323 R NRPDI +K + ++ I SD+YP + + D+ S + Sbjct: 247 DRALQNRPDIFIADKSIQMALQDERITASDMYPHVGATFDVFRRGDDPTVSGSAMEDRSE 306 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 W G ++ +F+ G+ +A ++ +++ + N EV++ I E ++ + Sbjct: 307 WRAGVQMQWTLFEWGRTYYAREQARQETRQLVAEYEDLLQNVSFEVKSDYLLIQESRQRI 366 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 + +E K+S ++ Y + +LD + E L A+ K+ +Y Sbjct: 367 KVARQGLEEAKESYRMAQARYEAQVGTSTQVLDAQANLTAAEARLINAESDFLKAVASIY 426 Query: 444 IAIG 447 A+G Sbjct: 427 RAMG 430 >gi|167585007|ref|ZP_02377395.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 206 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTHDNSFPGYNTHWSFGP 328 + RPDI E++ A + +IG+A S +P+L+L G + N F W+ GP Sbjct: 1 LERRPDIAAAERRAAAANEQIGVAISAFFPTLTLSAQGGVQSSVWSNLFTLPARFWTVGP 60 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L +FD G + A ++ + ++ +VL A ++VE+ L S + + + Sbjct: 61 QLAATLFDAGLRAAQTEAARAAYDQDVAAYRLSVLTAFQDVEDNLASQRILAQEIDVQRQ 120 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 AV+ + ++++ Y+ G L++L + L+ Q S V L A+G Sbjct: 121 AVDSAEHALAIVTNQYKAGTVDYLNVLTAQTTAFSAHQKLATIAGQRMVSSVGLVKALGG 180 Query: 449 GYN 451 G++ Sbjct: 181 GWD 183 >gi|328954469|ref|YP_004371803.1| outer membrane efflux protein [Desulfobacca acetoxidans DSM 11109] gi|328454793|gb|AEB10622.1| outer membrane efflux protein [Desulfobacca acetoxidans DSM 11109] Length = 449 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/394 (18%), Positives = 159/394 (40%), Gaps = 31/394 (7%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSY------- 101 + F+ SL + +A +QN + + +R+ + + R+ FP S Y Sbjct: 30 QDFHALSLEDCLALAREQNPVLTASRDRVRELVADYQAARSKFFPHLTLLSFYDRQPTNR 89 Query: 102 --ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK 159 A S F + G D + +++ + +V L V Sbjct: 90 FAAGGSTPFALFKREGYAGIAGKQLVFDGLKTYYNTQAARTGTQAQRQEVHKTALEVSYN 149 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + ++ KE + +AH+ L + +L+ F G ++L + ++++ E + Sbjct: 150 VTEAFYRLVEAKENLQVAHEALKEREDFAKLTEAFFNAGKVTRLDNFRAQSQVSQAEQAV 209 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + + +++ +G T + F IP + + ++N P+I+ Sbjct: 210 VEAQNAVCLAREILASTIGLKETIPVDVRGHLPQQFTAAPDIPT---LWQEALKNNPEIK 266 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 + +++ S + + A+ P +SL + H + G T W L P F+ G Sbjct: 267 RLDLEISQSRSLVKAAQGGYLPEVSLQATSDFRHRD-LGGTKTEWLAAVFLEYPFFEGGL 325 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED----KKIVTKLQHAVELHKK 395 K+ + +A S QY+ E + + ++ LT+ +D ++ V+ + + +++ Sbjct: 326 TKAQVAKASS----QYLQLMEKKRDRLNSLKADLTTAWKDQENSRQGVSTARQTLITNEE 381 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLS 429 + + ++ YR G+ LD+L TA+VE+ S Sbjct: 382 AYASALALYRYGKAIALDVL-----TAQVELTRS 410 >gi|213964232|ref|ZP_03392465.1| putative outer membrane efflux protein [Capnocytophaga sputigena Capno] gi|213953122|gb|EEB64471.1| putative outer membrane efflux protein [Capnocytophaga sputigena Capno] Length = 443 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 38/246 (15%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V AK N+ ++ +Y+ A + E I++A + ++ + KF G+ +KLSL ++ Sbjct: 127 VQEAKNNITLSVLEAYLQALYSYEGIAVAKNTALSSAEELKQAQTKFANGSIAKLSLAEI 186 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 E + E I E + V + LL P PN I + +P Sbjct: 187 ETRHANNEYAIIQAENQYANRVLTLKQLLELP----------------PNSDFAIALDLP 230 Query: 269 AD----LIRNRPDIRYQEK------KLADSVAKIG-----IAKSDLYPSLSLNGSIALTH 313 D +I N+ ++ Q K K+ S KI IAK+ P+LSL + + Sbjct: 231 NDEDVAIIPNKDEVFAQAKETLPNLKIYQSQQKIAEKDIKIAKAGYAPTLSLQAGVNTGY 290 Query: 314 DN-SFPGYNTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 N + Y T + G L +PIF + K K+N++ A+ + Q+ + Q+ Sbjct: 291 SNLNDLSYRTQLDSNFGQTIGASLNIPIFSQNKNKNNVKLAKITQQQAILEEQQAEKELY 350 Query: 367 KEVENA 372 ++E A Sbjct: 351 AKIETA 356 >gi|300821758|ref|ZP_07101903.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 119-7] gi|300525600|gb|EFK46669.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 119-7] Length = 478 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 93/491 (18%), Positives = 186/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +LAGC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + + QI I + G TS Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTALQQIEKEQNTIIATDRQLYQNGITSS--------- 230 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 ++ +E+DI + ++N + L Q +S +P + +P +L Sbjct: 231 VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|325519021|gb|EGC98532.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 147 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%) Query: 309 IALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 ++ T D S G Y W GP + + ++ + +A S ++ VL A+ Sbjct: 2 LSTTADPSSLGDKYAIAWGVGPLITWRFPNLAASRAQLAQARSDDAAARASFDAQVLRAL 61 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 KE E AL + + L+ A H ++ L+ +NY G L +LD +R+ V+ Sbjct: 62 KETEQALARYGAEWRRKAALETARAEHARAYRLAELNYDAGALDFLGVLDAQRSLVAVDQ 121 Query: 427 DLSIAKRQLAKSYVDLYIAIGSGY 450 L+ + +Q+A V ++ A+G G+ Sbjct: 122 ALAASTQQVALDQVAVFKALGGGW 145 >gi|317406937|gb|EFV86996.1| hypothetical protein HMPREF0005_05904 [Achromobacter xylosoxidans C54] Length = 138 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 65/127 (51%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS GP + + + G +++ I AE++ + + +VLNA++E E+AL Sbjct: 10 WSVGPLISWTLPNTGAVQARIAEAEANTKAAVARFDASVLNALRETESALVVYARQLDRQ 69 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 LQ A + ++ S + ++ G+ L +LD ER A E L+ + +L+ + ++ Sbjct: 70 AALQAARDQAAQAASQARQLFQYGKTDYLTVLDAERTLASNESALAAGQAELSNDQIAVF 129 Query: 444 IAIGSGY 450 +A+G G+ Sbjct: 130 LALGGGW 136 >gi|289672951|ref|ZP_06493841.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 96 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 47/84 (55%) Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 WS GP + FD G +++ IR A++ A+ +++ VL A++E ENA + ++ ++ + Sbjct: 11 WSLGPSITWAAFDLGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRL 70 Query: 384 TKLQHAVELHKKSMSLSMINYRQG 407 L + + + L+ + YR+G Sbjct: 71 VSLMRQSDASRSAARLASVQYREG 94 >gi|150006606|ref|YP_001301350.1| putative outer membrane protein [Bacteroides vulgatus ATCC 8482] gi|254881497|ref|ZP_05254207.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319642883|ref|ZP_07997519.1| outer membrane protein [Bacteroides sp. 3_1_40A] gi|149935030|gb|ABR41728.1| putative outer membrane protein [Bacteroides vulgatus ATCC 8482] gi|254834290|gb|EET14599.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385431|gb|EFV66374.1| outer membrane protein [Bacteroides sp. 3_1_40A] Length = 459 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/341 (20%), Positives = 151/341 (44%), Gaps = 34/341 (9%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ ++ VI K +Y + A+ K Sbjct: 138 GKIRAAYKMSLLGKE------MAQMNE-----NLTATEVIQKTDQAYALVVKAKEMKTVA 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L K N+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 187 DAYHAVLTELKNNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P T +H S +F P + + + + D+ R RP+ +K++A + ++ + Sbjct: 244 HLIGKPLTTQVHV----SGDF-PEIEKDLEVQV-LDITR-RPEYGILDKQVAIARQQVKL 296 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +S+L P + + GS H N +S + +P+F G+ + +R A++ Sbjct: 297 NRSELLPKVGIKGSYDYVHGLELNNKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAK 356 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ + Q + E+ A +++E K +++ +++ +S Y G + Sbjct: 357 LEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLET 416 Query: 411 LLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L D L+ + + + +VD A+ QL +YV A G+ Sbjct: 417 LSDHLEAQALWQQAYETKVD---ARFQLYLNYVAYLKAAGT 454 >gi|330951640|gb|EGH51900.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae Cit 7] Length = 166 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 13/169 (7%) Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAE 348 AK+ +A++ + P L+L+ + + + +S L PIF+ G++ + +A Sbjct: 2 AKVTVARAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKAT 61 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYR 405 + +E T++ ++N+ +VE AL SI D++ + H EL + + ++ Y+ Sbjct: 62 ARQEELLETYRGAIINSFADVEKALNSIRGLDQQ---RYWHEEELKQAQTAFRIAQSRYQ 118 Query: 406 QGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +G LL +L+ +R V V L +A+ Q + + LY A+G G+ Sbjct: 119 EGAEDLLTVLETQRTLYQAQDVSVQLRLARVQ---ASIALYKALGGGWQ 164 >gi|213963627|ref|ZP_03391879.1| outer membrane efflux protein [Capnocytophaga sputigena Capno] gi|213953755|gb|EEB65085.1| outer membrane efflux protein [Capnocytophaga sputigena Capno] Length = 432 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 168/405 (41%), Gaps = 60/405 (14%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +LN + A + NL+I Q+ + + + +A+ PS + ++ + + N Sbjct: 23 TLNDCIAYAKEHNLSIKQSEIDLKSTDIEVWQTKANFLPSINSEAAYNWNTGKNINPVSN 82 Query: 112 LKTNSTGQLDS---DWKIDLFGQ----RRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 N+T + S I LF R+ ++ L + Y Q+D+ K +I +I +Y Sbjct: 83 QFENTTFESASGGISMSIPLFSGLQNWRKLQQAKCKQLATQY-QLDMKKDEIILMIINAY 141 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + KE+I I L++ K+++ + G+ K + + EA++ S+E I E Sbjct: 142 TEVLSNKEKIKIQKAQLEISKESVARTRELINAGSLPKGDIYESEAQLFSLEQKIIETES 201 Query: 225 SF---RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + +M + + L Y E N F+ +P+ AD++ P+ Y+ Sbjct: 202 ALFIGKMGLAQLLLLKNYKDFEVA------DNTFE----VPV-----ADILNKTPEEIYR 246 Query: 282 EKKLADSVAKIGIAKSDLYP-SLSLNGSIALTHDNSFPGYNTHWS--------------- 325 K K+ A L SL L+ S ++ GY++ WS Sbjct: 247 NAKEIMGEVKLATANMQLAESSLRLSQSAFWPRLSAQWGYSSRWSKNQVMDFWKQLDTNK 306 Query: 326 ---FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 G L +PIF+ + SN++ + + Q+ + ++T L+A K + A KK+ Sbjct: 307 GMYAGLSLSIPIFNHFSVLSNVKTQKLALQKTQLAKEQTELSAEKNIYQAYNDAANAKKL 366 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYS--LLDILDIERATAKVE 425 + + ++S S Y Q R++ L++ D ++ + E Sbjct: 367 YEASEKTAQAKQQSFS-----YAQERHNVGLMNTFDFNQSKYEYE 406 >gi|212704950|ref|ZP_03313078.1| hypothetical protein DESPIG_03017 [Desulfovibrio piger ATCC 29098] gi|212671614|gb|EEB32097.1| hypothetical protein DESPIG_03017 [Desulfovibrio piger ATCC 29098] Length = 489 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/320 (18%), Positives = 133/320 (41%), Gaps = 18/320 (5%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 DS A + A+L++ ++ ++++ E L ++ + ++ F G + + Sbjct: 166 DSDKASLRKAELDMTEQVQTAFLEYLKAGENTRSMRDSLTRLREQLRIAQAYFEVGLSPR 225 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK-QSNNFQPNLYI 261 L +++ E ++ E + E + + ++TLLG+ AT Y + F+ L Sbjct: 226 LDVLQAEVDVSEAERLLIEAENTQATTLARLNTLLGFDATAVNTYTGTLKEVGFRYTLEQ 285 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 + + R RPD+ +K + + +SD YP + G ++T + PG Sbjct: 286 CLELAY-----RQRPDLYVAQKAVEIARKSQKEVQSDYYPQI--EGYYSMTQSGNTPGMQ 338 Query: 322 ---------THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 T+W G + +F+ G ++A + + L ++++ Sbjct: 339 RSGENGSHVTNWEVGAQATWNVFEWGTTYYADKQAGWQVTKMRYEQENLKLEVGYDIKSK 398 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 ++ E +K + Q++V ++ ++++ Y + + D+LD + L+ AK Sbjct: 399 YLAVQEARKRIAVAQNSVAQATEAYNVALARYHEHVGTNFDVLDASANLTSAQSSLTGAK 458 Query: 433 RQLAKSYVDLYIAIGSGYNP 452 + +Y+A+G Y+P Sbjct: 459 ADYLTALSQIYVAMGE-YHP 477 >gi|110597782|ref|ZP_01386066.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] gi|110340689|gb|EAT59169.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] Length = 424 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/318 (18%), Positives = 137/318 (43%), Gaps = 22/318 (6%) Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 + I S+L ++++A ++ L +Y + ++ +++A +I + + N+ L + Sbjct: 107 KQIRSALESINAAKYNYRSVSADLRFALRSAYTELLKAQDFVALAREIAERRRNNVRLIN 166 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 L++ G S + EA++ ++ E++ + +++ LG + Q Sbjct: 167 LRYQGGREHIGSFRQAEADLAQANFEVSQSERALLVAQVKLASALG----------RDQH 216 Query: 253 NNFQ--PNLYIPIN-IGIP--ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 N + +P++ +G P A L RN P + + + + + A+S P + L Sbjct: 217 NPIRVVGAFTVPLSSLGKPDMAILARNNPQFQQLDAQSKAARYDLDAARSVFLPQIYLTS 276 Query: 308 SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 +I + + P W+ G + +PI++ G ++ + RA + E + L Sbjct: 277 TIGRSATDRLPMDAVDWNSGLTVSVPIYEGGSGRARVSRAMAVVSEHNAAQKSGYLQLYD 336 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 +E + S + +++VT + ++ + S++ Y G + + + IE + Sbjct: 337 TLEESWKSFQDARQLVTVRKKFLDAAMERSSIANAQYSNGLVTFNEWVIIEN-------N 389 Query: 428 LSIAKRQLAKSYVDLYIA 445 L AK++ + DL IA Sbjct: 390 LVSAKKEFLNAGADLLIA 407 >gi|227536223|ref|ZP_03966272.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243926|gb|EEI93941.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33300] Length = 422 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 175/407 (42%), Gaps = 52/407 (12%) Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-------------FIPNLKTN 115 L NL +L +I +K IL +A L+P+ SIS I + N Sbjct: 37 LSSNLELLAGKYKIEQSKAAIL--QAKLWPNPTFSISEVNLWKNNPVETMSPLIGSWGRN 94 Query: 116 STGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L+ + I+ G+R+ + NL + + + N+ L S I+ + + + Sbjct: 95 QQVALELEQLIETAGKRKKRVRLEQLNLKNQELEFEETLRNLKFDLRESVIELQKLQGQE 154 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 S+ +L++ E ++ QG S++ V++ +E+ S E+++ + S + I Sbjct: 155 SLYQSQFELFRNLSEAFEKQWKQGNVSEMEYVRIHSEMLSFENELAEIRASKIDLIKKIK 214 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR-------NRPDIRYQEKKLAD 287 T E + +N Q N YI IP DL+R NR D R +L Sbjct: 215 TYSNVKGPESILL----ANALQINTYI-----IP-DLLRWKETALENRADFRMASNQLDI 264 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S ++ I K++ P++ L +L +D N P + G + LP+F++ + NI Sbjct: 265 SRQQLLIEKAERKPNVQL----SLGYDRGGNVMPDF---IGLGASIELPVFNRN--QGNI 315 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM--- 401 R A+ ++ + L + E++ + + + ++I+ KL A + K + LS+ Sbjct: 316 RIAQLEIEKSTTELTQNKLMIVNEIDATVQRLVQLQRILEKLSGAFD---KQLDLSLEKY 372 Query: 402 -INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 N++ S+++ +D + + + +L K Q K+ +L IG Sbjct: 373 TRNFQNRNISVMEFVDFVSSYLENKKNLIDRKEQYLKTIEELQYVIG 419 >gi|317153634|ref|YP_004121682.1| outer membrane efflux protein [Desulfovibrio aespoeensis Aspo-2] gi|316943885|gb|ADU62936.1| outer membrane efflux protein [Desulfovibrio aespoeensis Aspo-2] Length = 456 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 27/261 (10%) Query: 206 VKLEAEIKSIESDIPTLEKSFRMNVHNIST-------LLGYPATEFLHYMQKQSNNFQPN 258 +K ++E+ E D+ T + + +N+ST LL P + Y+ + N Sbjct: 194 LKPKSEVLDAEVDLATARQDLLIARNNVSTQQAQLNTLLNIPIETNVDYVGELVN----- 248 Query: 259 LYIPINIGIPADLIR---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS------- 308 IP ++ +P L R RPD+ +K + + IA S YP + + + Sbjct: 249 --IPFSLTLPECLTRAYKGRPDLVIGQKSVEIAKKDSTIAASSFYPQVEADWNYYNKGVD 306 Query: 309 IALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 L+ +P Y + +W+ G + IF+ G + ++ E ++ ++T LNA Sbjct: 307 AGLSRGGVYP-YTSKEYWTVGVGASMSIFEWGADYYDYKQFEEIVKQVEAQLEDTRLNAG 365 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EV+ +L +I E + +VE +++ +++ Y+ + D+L+ + E Sbjct: 366 FEVKQSLLNIYEAADRINVADKSVEAAEEAYRMAVARYQAQVGTNTDVLNAQARLTTSEA 425 Query: 427 DLSIAKRQLAKSYVDLYIAIG 447 LS A + LY+++G Sbjct: 426 QLSQALADYGTAISSLYVSMG 446 >gi|188592212|ref|YP_001796810.1| outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] gi|170938586|emb|CAP63573.1| putative outer membrane efflux protein [Cupriavidus taiwanensis LMG 19424] Length = 431 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/280 (20%), Positives = 123/280 (43%), Gaps = 12/280 (4%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ DA +ER+++ + L LY++ + S + G ++ + KL+ + +SD+ Sbjct: 131 AFFDALASQERVAVLRETLALYERTRQASETRLKAGDVARADVTKLQLDALRAQSDMRQA 190 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA---DLIRNRPDIR 279 + ++ +G P T ++N + ++ +P D ++ RPD+ Sbjct: 191 ITDHYRDKAMLAQAMGVPGT--------LADNRLVADWPVLDAAVPPPDPDTLQRRPDVT 242 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E +LA + A +A++ P +++ + Y + SFG L +P+ + Sbjct: 243 AAEARLAAAAATRDLARAGRVPDVTIGAQAEHYPTSPSNSYGSGNSFGVFLSVPLPVRHS 302 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 RRAE +L A E+E + + ++ + +++ V +S++ Sbjct: 303 NGGEARRAEVDYYAALDDRNRVMLEAGNEIERLRSQLETARQSLRQMREDVLPAAESVAG 362 Query: 400 SM-INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 S YR+G +LD+LD RA + +D A+ + AK+ Sbjct: 363 SAEFAYRKGATGVLDLLDARRALRQTRLDAVAAQAEYAKA 402 >gi|296115492|ref|ZP_06834125.1| RND efflux system outer membrane lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] gi|295977975|gb|EFG84720.1| RND efflux system outer membrane lipoprotein NodT [Gluconacetobacter hansenii ATCC 23769] Length = 292 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%) Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q L + +E+ L+ G ++ ++ V + S I L+ H I+ Sbjct: 4 VAQQGLSRREGIVEMLALREKAGLSTDINAVAAREALTDTRSQIDLLDGEISARRHEIAA 63 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYI-----PINIGIPADLIRNRPDIRYQEKKLADSVA 290 LLG + +F + +P+L + P++ +PA L+ RPD+ + + + Sbjct: 64 LLGK-SPDFGDAI------VRPHLPVIADPAPLS-NVPAVLLGYRPDVEAKRAAVEATSN 115 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSF-------PGYNTHWSFGPKLYLPIFDKGKIKSN 343 +G A++ YP + L +A S PG + FGP + LPIF+ G++++ Sbjct: 116 AVGAARAAFYPDVDL---VAFAGFRSLDIGHMMRPG-SVATQFGPAVTLPIFEGGQLRAA 171 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSIN-------EDKKIVTKLQHAVELHK 394 ++ + TV A+++ + ++ + E + V QH V+L + Sbjct: 172 LKNRLGEYDAAVNDYNATVSKALQQAADGISDLKARQAARQEAEAAVRHWQHVVDLER 229 >gi|294775433|ref|ZP_06740946.1| outer membrane efflux protein [Bacteroides vulgatus PC510] gi|294450674|gb|EFG19161.1| outer membrane efflux protein [Bacteroides vulgatus PC510] Length = 459 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/340 (20%), Positives = 150/340 (44%), Gaps = 34/340 (10%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ ++ VI K +Y + A+ K Sbjct: 138 GKIRAAYKMSLLGKE------MAQMNE-----NLTATEVIQKTDQAYALVVKAKEMKTVA 186 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L K N+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 187 DAYHAVLTELKNNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 243 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 L+G P T +H S +F P + + + + D+ R RP+ +K++A + ++ + Sbjct: 244 HLIGKPLTTQIHV----SGDF-PEIEKDLEVQV-LDITR-RPEYGILDKQVAIARQQVKL 296 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESS 350 +S+L P + + GS H N +S + +P+F G+ + +R A++ Sbjct: 297 NRSELLPKVGIKGSYDYVHGLELNNKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAK 356 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 ++ + Q + E+ A +++E K +++ +++ +S Y G + Sbjct: 357 LEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLET 416 Query: 411 LLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L D L+ + + + +VD A+ QL +YV A G Sbjct: 417 LSDHLEAQALWQQAYETKVD---ARFQLYLNYVAYLKAAG 453 >gi|108762262|ref|YP_629251.1| cation efflux system protein CusC [Myxococcus xanthus DK 1622] gi|108466142|gb|ABF91327.1| cation efflux system protein CusC [Myxococcus xanthus DK 1622] Length = 456 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 18/185 (9%) Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK 329 + +R RP++ +L A + +AK D YP + + G YN+ W P Sbjct: 271 EALRLRPELEGLRARLGGGEAAVRLAKRDYYPDVMVMGE-----------YNSMWMDTPH 319 Query: 330 LYLP------IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 ++ D GK K+ +R AES + ++ + + EVE A + E +++V Sbjct: 320 QFMAGVTINIPLDFGKRKAAVREAESGLKRLRREEEQLISDIRVEVEQARSRAEEARRVV 379 Query: 384 TKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 Q + K +S + + G+ S +++ ER +VE+ A + + +L Sbjct: 380 ALFQERLIPAAKDQVSAARAGFESGKNSFQVLIEAERGLRRVELREQTALADVQRRRAEL 439 Query: 443 YIAIG 447 A+G Sbjct: 440 DKAMG 444 >gi|315224665|ref|ZP_07866488.1| outer membrane channel protein TolC [Capnocytophaga ochracea F0287] gi|314945293|gb|EFS97319.1| outer membrane channel protein TolC [Capnocytophaga ochracea F0287] Length = 444 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 42/248 (16%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V AK N+ ++ +Y+ A + E I +A + ++ + KF G+ +KLSL ++ Sbjct: 128 VQEAKNNITLSVLEAYLQALYSYEGIEVAKNTARSSGEELKQAQGKFANGSIAKLSLAEI 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 E + E I E + V + LL P PN I + +P Sbjct: 188 ETRHANNEYAIIKAENEYESRVLTLKQLLELP----------------PNSDFAIALDLP 231 Query: 269 AD----LIRNR-----------PDIR-YQ-EKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 AD +I N+ P+++ YQ ++K+A+ I IA++ P+LSL + Sbjct: 232 ADDETVIIPNKDVVFAEAKQKLPNLKIYQSQQKIAEK--DIKIARAGYAPTLSLQAGVNT 289 Query: 312 THDN-SFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 + N + Y T + G L +PIF + + K+N++ A+ + Q+ + Q+ + Sbjct: 290 GYSNLNDLSYRTQLDSNFGQTIGASLNIPIFSQFRNKNNVKLAKVTQQQAVLDEQQAEKD 349 Query: 365 AIKEVENA 372 ++E A Sbjct: 350 LYTKIETA 357 >gi|294340291|emb|CAZ88667.1| putative Cobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC) [Thiomonas sp. 3As] Length = 435 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/304 (17%), Positives = 127/304 (41%), Gaps = 18/304 (5%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + ++ L +++ A + ++ ++ + L ++N++ + + G + +++ Sbjct: 146 RAQLVLALRRAWLAAVYTRQAMAAVQRQQSLARENVDAAMASYRSGNGPQSDVLRARLAE 205 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPAD 270 + +D L ++ +I+ LG Q+ P+ + ++ G P Sbjct: 206 DELRNDQSALAADEAASLADIAQALGS----------DQTPEIDPD-WPSLSPGATTPEQ 254 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 +P +R + K+ + A + +AK D P +++ S + FPG +S G + Sbjct: 255 APPTQPLLRMAQAKVRIAQAGVQVAKKDFLPEITVGASYGKSF---FPGSPNFFSAGVSM 311 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ-HA 389 LPIF ++ + A + E Q+ L +++ A + ++ +++ H Sbjct: 312 NLPIFSSHRLDQELDSARAQVMEARYDEQDQRLALQQQIRTATARMRSQQEKWQRMRTHM 371 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIAIGS 448 + L + ++ Y GR S+ D+L ++A +E+ +R L + +L Y+ S Sbjct: 372 LPLAHAAYDSTLTTYSNGRASMSDVLKAQQAVFALELQTLQQRRDLLATQAELDYLTTPS 431 Query: 449 GYNP 452 P Sbjct: 432 EQQP 435 >gi|300114233|ref|YP_003760808.1| outer membrane efflux protein [Nitrosococcus watsonii C-113] gi|299540170|gb|ADJ28487.1| outer membrane efflux protein [Nitrosococcus watsonii C-113] Length = 445 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 56/275 (20%) Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 ++ +++ G + ++ E +E + TL++ R I+ LL P Sbjct: 169 IAEIQYATGRAGQQDALQAEVAQARLEVEAVTLDRRRREVQARINALLNRP--------- 219 Query: 250 KQSNNFQPNLYIPINIGIP---------ADL----IRNRPDIRYQEKKLADSVAKIGIAK 296 P +P+ G+P A L + P++ ++A + A++G+A+ Sbjct: 220 -------PQTRVPLPAGLPQLTIPLPRLAQLQMTALGAHPELARIRARIAGAKAQVGLAE 272 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNT-------HWSFGPKLYLPIFDKGKIKSNIRRAES 349 D YP + GYN+ W+ G + LP FD +S A Sbjct: 273 KDFYPDFQI-----------MAGYNSFWDDPAKRWTLGFSINLP-FDYSNKRSAALDAAR 320 Query: 350 SAQEQYITWQETVLNA--IKEVENALTSINEDKKIV-TKLQHAVELHKKSMSLSMINYRQ 406 + Q + W+ T A + E+E + ++ E++ ++ L+ L + ++ + +YR Sbjct: 321 ADLRQ-VRWRFTDREARLLGELEASRAAVEENEAVIKVYLRRLAPLAQDNLEAARADYRA 379 Query: 407 GRYSLLDILDIERATAKVEVDLSIAK----RQLAK 437 G L+++D ER + E L+ + RQLA+ Sbjct: 380 GAGPFLNVIDAERQQLRTENGLARVRADYLRQLAQ 414 >gi|167719659|ref|ZP_02402895.1| outer membrane efflux protein OprA [Burkholderia pseudomallei DM98] Length = 183 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 11/169 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L L+ AL N + AT RI A+ RAD PS S+ + Sbjct: 14 WRAYFTDPALRALIDAALANNRDLRIATLRIQEARGLYGVARADRLPSIDGSLGYERTRL 73 Query: 108 FIPNLKTNSTGQL------DSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKL 160 + P L+ ++T L S ++IDLFG+ + + +++LA + A++++I+++ Sbjct: 74 YDPVLRESATSSLYRASVGVSAFEIDLFGRVKSLSDAALAEYFATAEAQRAARISLIAEV 133 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 +Y+ R +++ +A + L L+ ++ G ++ + L E Sbjct: 134 ASAYVTERALVDQLGLAERTLAARDAAYALTQRRYAAGTSTAIELRTAE 182 >gi|326799110|ref|YP_004316929.1| outer membrane efflux protein [Sphingobacterium sp. 21] gi|326549874|gb|ADZ78259.1| outer membrane efflux protein [Sphingobacterium sp. 21] Length = 450 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 32/288 (11%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 ++++ NVI ++ +Y +E++ + +D +K + ++ ++ G K+ L ++ Sbjct: 140 AEVSEENVIQQVASAYYQVIINQEKMKVIDANIDRTQKLLTMTSSQYDLGLAKKIDLDRV 199 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + + ++ES L + + + +G P E + Q + + + G Sbjct: 200 KVNLSNLESQKQDLSTAITQQNNLLKYYMGMPINENIQIPQSELQTLKQEAFALDGNGFN 259 Query: 269 ADLIRNRPDIRYQEKKLA-DSVAKIGIAKSDLYPSLSLNGS-IALTHDNSFPGYNTHW-- 324 D + ++ QE L+ A+I ++ YPSLSL + I T N F Y++ Sbjct: 260 LDRMAQYKVLKSQESLLSYQKKARI----AEYYPSLSLGANYIYNTQSNRFNPYSSKALN 315 Query: 325 ----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET-------VLNAIKEVENAL 373 + L +P+FD +S +R+A+ Q+ Y + T NA +++N+L Sbjct: 316 FDMSAITLTLKVPLFDGFARRSRVRQADVEIQKNYQDIKNTSNSLKMAYENANNQLKNSL 375 Query: 374 TSI---NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 T+I E+KK+ ++ ++ + NYR G SL D+L E Sbjct: 376 TTIRTQEENKKLAEEVFYSTQ----------NNYRNGLASLTDLLTAE 413 >gi|256819229|ref|YP_003140508.1| outer membrane efflux protein [Capnocytophaga ochracea DSM 7271] gi|256580812|gb|ACU91947.1| outer membrane efflux protein [Capnocytophaga ochracea DSM 7271] Length = 444 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 42/248 (16%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V AK N+ ++ +Y+ A + E I +A + ++ + KF G+ +KLSL ++ Sbjct: 128 VQEAKNNITLSVLEAYLQALYSYEGIEVAKNTARSSGEELKQAQGKFANGSIAKLSLAEI 187 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 E + E I E + V + LL P PN I + +P Sbjct: 188 ETRHANNEYAIIKAENEYESKVLTLKQLLELP----------------PNSDFAIALDLP 231 Query: 269 AD----LIRNR-----------PDIR-YQ-EKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 AD +I N+ P+++ YQ ++K+A+ I IA++ P+LSL + Sbjct: 232 ADDETAIIPNKDVVFAEARQKLPNLKIYQSQQKIAEK--DIKIARAGYAPTLSLQAGVNT 289 Query: 312 THDN-SFPGYNTH------WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 + N + Y T + G L +PIF + + K+N++ A+ + Q+ + Q+ + Sbjct: 290 GYSNLNDLSYRTQLDSNFGQTIGASLNIPIFSQFRNKNNVKLAKVTQQQAVLDEQQAEKD 349 Query: 365 AIKEVENA 372 ++E A Sbjct: 350 LYTKIETA 357 >gi|301021096|ref|ZP_07185137.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 69-1] gi|300398277|gb|EFJ81815.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 69-1] Length = 478 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 89/491 (18%), Positives = 184/491 (37%), Gaps = 71/491 (14%) Query: 6 AIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWW 53 A F L + +L GC P+ T+ ++ +DT +WW Sbjct: 11 ACFPLLL-MLTGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWW 59 Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SY 101 ++D L L+ ALQ + A +RI A+ ++ P S Sbjct: 60 LEYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSA 119 Query: 102 ASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDI 151 + F N TN T L + W +D++G+ R + + L + + A+ + Sbjct: 120 EGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQ 179 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 + + + Y + + ++ QI I + G TS + V+ + Sbjct: 180 TRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDIN 239 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 + + ++ +S L + Q ++ P + +P +L Sbjct: 240 ASKTRQQLNDVAGKMKIIEARLSALTNH---------QTKALKLNPVALPKVASQLPDEL 290 Query: 272 ----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHW 324 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 291 GYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQM 350 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + Sbjct: 351 GVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVAQAASQV---QTLAE 407 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSY 439 K QH ++ + +L ++ Q R++ I + A++ + + + Q + Sbjct: 408 KNQHQAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDAS 465 Query: 440 VDLYIAIGSGY 450 + L A+G GY Sbjct: 466 IQLTGALGGGY 476 >gi|78188313|ref|YP_378651.1| FusA/NodT family protein [Chlorobium chlorochromatii CaD3] gi|78170512|gb|ABB27608.1| FusA/NodT family protein [Chlorobium chlorochromatii CaD3] Length = 436 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/289 (19%), Positives = 126/289 (43%), Gaps = 16/289 (5%) Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 +L +++ +E + + ++I + +KN+ L L++ G SL + EA++ + Sbjct: 145 QLRSAFVALLKAQELVELTNEIAERRQKNLRLIRLRYNGGREHIGSLRQAEADVAEATFE 204 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP--ADLIRNRP 276 + ++ + +++ LG + L + Q P ++ P L+ P Sbjct: 205 VEQAKRELTLAQRHLALALGRQKSVALRVQ----GSLQA---APFSLKKPDIEQLLTIHP 257 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 + + + ++ ++S P+L+L S+ T + FP + W G L +PI+ Sbjct: 258 ATQQAAAQSRAARYELEASRSAFSPTLALTSSLGRTAASYFPLESVDWQAGLSLAVPIYS 317 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ K+ + +A + A EQ Q VL +E A T + + ++ + + VE + Sbjct: 318 GGEGKARVAKARAYALEQQAAAQAKVLQVTGALEAAWTRLQDAEQAIAVRRRFVEAANER 377 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 +++ Y G + + IE +L AK++L ++ L++A Sbjct: 378 ATIASAQYSNGLLGFNEWMIIED-------NLVNAKKRLLEASAALFVA 419 >gi|294793369|ref|ZP_06758514.1| putative outer membrane efflux protein [Veillonella sp. 6_1_27] gi|294795188|ref|ZP_06760322.1| putative outer membrane efflux protein [Veillonella sp. 3_1_44] gi|294453980|gb|EFG22355.1| putative outer membrane efflux protein [Veillonella sp. 3_1_44] gi|294455800|gb|EFG24165.1| putative outer membrane efflux protein [Veillonella sp. 6_1_27] Length = 493 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/378 (20%), Positives = 155/378 (41%), Gaps = 43/378 (11%) Query: 63 KLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLKTNSTG--- 118 + V +AL N T Q AAK + V A PS SY + + + + +G Sbjct: 78 RTVDLALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYGWSAQKTGGDTGSGKSGSHN 137 Query: 119 ----------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 QLD+ ID R E + A+ + A Q LN LI S Sbjct: 138 FSISAPVFNPQLDAS--ID--SARYTREGTGASYEEALQQSKYDALNGYYTLIMS----- 188 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + +A Q + Y+ ++ ++ G + ++ + + ++ + + + + Sbjct: 189 --RNMVDVAQQAVKDYQGHVTNVEAQYNVGLVASSDVLAAKTNLDDSQTSLVKAQNAANL 246 Query: 229 NVHNISTLLGYPA----TEFLHYMQKQSNNF---QPNLYIPINIGIPADLIRNRPDIRYQ 281 N++ ++ YPA T H +Q + N Q Y ++ + L+++ D++ Sbjct: 247 AEANLNQVIAYPAQTAITTAEHDLQYKPYNVTLEQAKAYAMLH---RSALVKSALDVKSA 303 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 E+ + AK+ P++++ + + G +T WS G ++D G Sbjct: 304 EEAVKS-------AKAGYLPTVAVKAGRGYGDPDGYFGTSTKSWSVGASATWNLWDGGAT 356 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 ++ I++A + ++ TV + V+ A ++ ++ + Q AV ++S ++ Sbjct: 357 QNAIKKANAQLEQAKEANLATVDAVLLAVQKAYLNLRAAEQTIQSTQTAVAQGQESFRIA 416 Query: 401 MINYRQGRYSLLDILDIE 418 + YR G + LD+LD E Sbjct: 417 TLRYRAGVGTNLDVLDAE 434 >gi|260170582|ref|ZP_05756994.1| outer membrane efflux protein [Bacteroides sp. D2] gi|315918930|ref|ZP_07915170.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692805|gb|EFS29640.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 465 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/347 (21%), Positives = 139/347 (40%), Gaps = 58/347 (16%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI 104 + +DTLK + L + A +QN+TI + + + ++ + +A LFPS S Sbjct: 30 LQVDTLKETKIPAQWDLQSCIDYAKEQNITIRKNRITATSTQIDVKTAKAALFPSLSFST 89 Query: 105 SHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDS 144 S + + N KT+ G L++ W + G +R L++ Sbjct: 90 SQQVVNRPYQETSSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKLNN 148 Query: 145 AYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 A++D+A + N+ + YI + E + + L + + G+ +K Sbjct: 149 QVAELDVATSENNIQESIAQVYIQILYAAESVKVNESTLQVSIAQRDRGQELLNAGSIAK 208 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 +LEA++ + + T + +TL Y N N+Y+P Sbjct: 209 SDFAQLEAQVSTDRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIYLP 256 Query: 263 I----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 N+ P ++ RP+I + + S IGIAKS P++SL+ I Sbjct: 257 ALSDENVLAPLPTKKDVYISALSLRPEIEASKLNVEASELGIGIAKSSYLPTISLSAGIG 316 Query: 311 LTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 317 TNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|152988235|ref|YP_001348075.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa PA7] gi|150963393|gb|ABR85418.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa PA7] Length = 428 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 84/405 (20%), Positives = 174/405 (42%), Gaps = 31/405 (7%) Query: 55 SFNDTS--LNKLVKIALQQN---LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 SFN TS L + ++ ALQ N + + TE A++ A L P+ +S Sbjct: 35 SFNGTSVSLEQALERALQSNPGLAAVGRETEIAAGARQQ-----AGLIPNP--ELSWDVE 87 Query: 110 PNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + ++L G+R +E + + A+ Q+++ + + +++ +Y A Sbjct: 88 DTRQGNRQTSVSLAQPLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAEVRGAYYAAL 147 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A LDL ++ ++ + + G+ S + V+ + + + D+ E + Sbjct: 148 TAQERVRLAKTSLDLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELELQR 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKL 285 +S+ P F + +P +I A L+R+ P +R +++ Sbjct: 208 TYVQLSSTWNEPQPGFARVGGELD-------AVPASITRGA-LLRHLDESPSLRLAAQEV 259 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSN 343 A A++ + K P+L++ SI +D + G + G + LP+FD+ + N Sbjct: 260 ARGEAQVDLEKRQRIPNLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGN 315 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 I A+S A + + T+L E A + ++ + ++ + +S SM Sbjct: 316 IYAAQSRADQARDLQRATLLRLRSEAVQAYDRLRTSEQELALVRRDLLPGAQSALDSMTR 375 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G+++ LD+LD +R V A A++ V + +G Sbjct: 376 GFEMGKFNFLDVLDAQRTLVSVRAQYVRALDAAAQARVSMERLLG 420 >gi|194333961|ref|YP_002015821.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] gi|194311779|gb|ACF46174.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] Length = 439 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 19/266 (7%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L +++D +E + +A +I + KKN+ L L++ G SL + EA++ ++ Sbjct: 152 LRTAFVDLLKAQELVGLAGEIAERRKKNVRLLQLRYNAGREHIGSLRRAEADMAEAAFEV 211 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 E++ + +++ LG + K S +L + L R P ++ Sbjct: 212 AQAERALVLARSKLASALGRDQRSVVSV--KGSFKASESLVSTPQFSV---LARQNPQVQ 266 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339 E + + ++ P+LSL S+ + + P W+ G + +PI + G Sbjct: 267 QLEAVERSARHDLDASRHAFAPALSLTSSVGRSSFDQLPVDALDWNAGFSVSIPIIEGGS 326 Query: 340 IKSNIRRA-----ESSAQEQ--YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 ++N+ +A + QEQ Y+ +T+ + K ++A ++ KK +E Sbjct: 327 GRANVAKALAALNNKAGQEQSGYLQVLDTLEESWKNFQDASENVGVQKKF-------LEA 379 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE 418 + +++ Y G S D + IE Sbjct: 380 AAERSTIANAQYSNGLISFDDWVIIE 405 >gi|300727125|ref|ZP_07060544.1| putative outer membrane efflux protein [Prevotella bryantii B14] gi|299775669|gb|EFI72260.1| putative outer membrane efflux protein [Prevotella bryantii B14] Length = 499 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/310 (18%), Positives = 133/310 (42%), Gaps = 8/310 (2%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D A +D + NV+ + +Y K + +A Q +L K H +G +K Sbjct: 190 DMAINNMDNKQQNVLYAVDNAYWLTVSLKNKEKLALQYRELLGKLNNDVHKLIKEGLATK 249 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 +K+E + + +I L+ + ++ L G E + ++ ++ NF + Sbjct: 250 SDGLKVEVAVNEADMNITRLQDGVALAKMSLCQLCGIDLNEGI-VLEDENKNFSES--TE 306 Query: 263 INIGIPADL-IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 NI D + RP++R + + S I + ++ P ++L G +++ N F G+ Sbjct: 307 TNIATTTDTSFQARPEVRLLQNMVDISEQNIKLTRALYLPHIALTGGYMVSNPNIFNGFE 366 Query: 322 TH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 W+ G + +P+++ + IR ++ Q + + +V + +N Sbjct: 367 KKFSGVWNVGILVQIPVWNWFDSRYRIRTSKGMTQIALLELNDVKGKISLQVAQSRFKVN 426 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 E K + + +E ++++ + + +++G S+ D++ + A K + ++ + + Sbjct: 427 EATKKLNMARKNMEAAQENLRCANLGFKEGVMSVTDVMKAQTAWVKAQTEILDSDIDVKL 486 Query: 438 SYVDLYIAIG 447 S + L A+G Sbjct: 487 SQITLNKALG 496 >gi|311693342|gb|ADP96215.1| type I secretion outer membrane protein, TolC family [marine bacterium HP15] Length = 460 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/295 (19%), Positives = 119/295 (40%), Gaps = 26/295 (8%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 +SA A+ ++A+ +I + +Y + ++ ++ A ++ E + +F G + Sbjct: 112 ESARAEYNLAQQQLILDVATAYFNVLRARDTVTTARATEAAIQRQYEQAQERFDVGLIAI 171 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + + A +S E + ++ L G A E + Q NF P Sbjct: 172 TEVYEARASYDDSKSQRIAAENQLNVAREQLARLTGEYAEELDNLRQ----NFPLGRPDP 227 Query: 263 INIGI-PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 ++ A + I+ +L + A + AK+ YP+L LN S T N G N Sbjct: 228 MDPSAWEATALEQNWSIQSALFELNANEAGLREAKAGHYPTLDLNASYGKTDLNGIDGAN 287 Query: 322 -----------THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE-- 368 T + G L +P++ G ++ +R+ Q +T E LN ++ Sbjct: 288 APITSQQDGTTTRGTIGLTLNVPLYSGGGTQAGVRQ-----QRSLVTVAEQSLNTVRRDV 342 Query: 369 ---VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 + ++N + + + L+ + + ++ + Y G +++++LD ERA Sbjct: 343 RVNTRSLFLTVNNNVETASALEQTIVSRRSALDATRAGYEVGTRNIVEVLDAERA 397 >gi|255033858|ref|YP_003084479.1| outer membrane efflux protein [Dyadobacter fermentans DSM 18053] gi|254946614|gb|ACT91314.1| outer membrane efflux protein [Dyadobacter fermentans DSM 18053] Length = 454 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 31/297 (10%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ D ++I +A + + ++++ + ++ G T K+ + + + ++ + Sbjct: 164 AFYDVLATTQQIKVADEDIVRLERSLRDAENQYKSGITDKIDFKRATISLNNTRANRKSN 223 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ- 281 ++ + + + TL+GYP + L + Q I ++ DL I YQ Sbjct: 224 DEVLKAKLEYLKTLMGYPLNKALEI---SYDTLQMEREIALDTMQNVDL---NARIEYQI 277 Query: 282 ---EKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPG-YNTHW--SFG-PKLYLP 333 +KKLA+ A + K P+LSLNG+ L +N F YN ++ SFG L LP Sbjct: 278 LATQKKLAE--ANLQYNKWSYLPNLSLNGAYNLNFQNNQFSDLYNKNYPNSFGLLTLSLP 335 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVL--NAIKEVENALTSINEDKKIVTKLQHAVE 391 IF GK K+N ++AE + + + W L N E AL + + + + VE Sbjct: 336 IFQGGKRKANTKQAEWALKR--LDWDLKGLQNNVNSEYAAALANYKGNLTNLLAQKENVE 393 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L ++ + + Y+ G + L+++ E DL +A+ Y LY+ + S Sbjct: 394 LAREVYDVIQLQYKSGIKTYLEVV-------TSETDLRLAR---INYYNALYLVLAS 440 >gi|193211732|ref|YP_001997685.1| outer membrane efflux protein [Chlorobaculum parvum NCIB 8327] gi|193085209|gb|ACF10485.1| outer membrane efflux protein [Chlorobaculum parvum NCIB 8327] Length = 448 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 71/351 (20%), Positives = 148/351 (42%), Gaps = 31/351 (8%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR------------ 107 +L++ +++ + N LQA E + AA + R+ FP AS +R Sbjct: 37 TLDEALRMTREHNPRALQAVEEVKAADAQVTRGRSGYFPHLSASAGYRYLDPVAEANFGG 96 Query: 108 ----FIPNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIP 162 F+PN N ++ ++ + FG+ R ++ + A +SA + +I ++ I Sbjct: 97 ATIQFVPN--DNYDARVTAEMMLYDFGRTGRTVDLAKAGRNSAGIRQEITLRDLSLATIR 154 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ +E +S+ + +D +KN++ ++ +GA ++ L+ + + + + Sbjct: 155 AFYSVLFLQEAVSVQQKEIDALQKNLDHMQKRYDEGAATRFDLLTTQVRLAAAGNRKIDY 214 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 E + L G L+ S +F + + A + RP++ Sbjct: 215 ETQLHNQEIALRRLCGLDEQAPLNL----SGSFDITVADKDANRLAAAALEQRPELMLAR 270 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN---THWSFGPKLYLPIFDKGK 339 + L + K +A + P + + S T + P + T+ + G +L +PIFD Sbjct: 271 ENLKAASYKKSLAGKEFLPKIVGSASWG-TANGYMPDIDKMRTNVAAGVELQVPIFDGFG 329 Query: 340 IKSNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + +R A + SA++Q + ++ I++ N L S +E K T LQ Sbjct: 330 RSAALREAAAMKRSAEQQQLDTEQMAQAEIRQSLNDLKS-SEQKIETTCLQ 379 >gi|154494965|ref|ZP_02033970.1| hypothetical protein PARMER_04011 [Parabacteroides merdae ATCC 43184] gi|154085515|gb|EDN84560.1| hypothetical protein PARMER_04011 [Parabacteroides merdae ATCC 43184] Length = 460 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 87/432 (20%), Positives = 174/432 (40%), Gaps = 56/432 (12%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI---------- 109 + K ++IAL +N T+ A + I K A LFP S+A+ +R + Sbjct: 36 IKKALEIALSENPTVKVANKEIQKKKYAQKGSYAALFPQVSFAADYNRTLKKQVMYMDGF 95 Query: 110 -------------PNLKTNSTGQLDSDWKIDLFGQRRHIESSL--------ANLDSAYAQ 148 PN+ D++W + + ++L +++ A Q Sbjct: 96 DMGSTEIPGMEDMPNMDEGIEVGRDNNWNLGFNASMPIVNAALWKSLSISAVDVELAIEQ 155 Query: 149 VDIAKLNVISKLIPSYIDA-------RHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +K+ +++++ Y R FKE A + +++ H KF QG + Sbjct: 156 ARSSKIAMVNQVKKGYYGVLLANDSYRVFKESYDNAME------NYLDIKH-KFEQGTVA 208 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + L++ +K+ E ++ E + + + LLG + + Q +F+ +L+ Sbjct: 209 EYDLIRANVTVKNSEPNMLQAENALVLAKWQLKALLGMDLDINIE-CEGQLTDFEKDLFG 267 Query: 262 PINIGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNSF 317 + D + N D++ + + + + K D P+LSL G A+ +D F Sbjct: 268 DF---LSTDTTLANNTDLKQMDLQAKQLEKTLTMQKFDYLPTLSLTGLYQWTAMNNDFKF 324 Query: 318 PGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 Y N + G L +PIF G I++ +S ++ + ++T N ++ + + Sbjct: 325 KDYMWNPYSMVGLSLSIPIFSGGSKFYKIKQTRNSIEQLSLQREDTQRNLQLAIKQYIDN 384 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 +N K Q VE ++ +S Y G +LL++ D E A + +++ + A Sbjct: 385 MNTCVKRFDASQKGVEQAERGYMISQKRYDTGAGTLLEMNDSELALTQAKLNFNQAIYDY 444 Query: 436 AKSYVDLYIAIG 447 + DL +G Sbjct: 445 MVAKADLEKVLG 456 >gi|326336593|ref|ZP_08202762.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691258|gb|EGD33228.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 437 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/312 (21%), Positives = 132/312 (42%), Gaps = 44/312 (14%) Query: 79 TERINAAKENILSVRADLFPSSYASISHR-----FIPNLKTNSTGQLDSDWKIDLFGQRR 133 T+ IN A N +SV+ AS++H +PN+ N++ +++ I+ R Sbjct: 27 TDCINYAITNNISVKKTQLNQQIASVNHHQARSNRLPNVGANASANVNNGSVINQITNDR 86 Query: 134 HIESSLANLDSAYAQVDI--------------------------AKLNVISKLIPSYIDA 167 +++ N A V + A+ N++ ++ +Y+ A Sbjct: 87 VNQTTFTNSFGISASVSLYEGNRLNLQIQRTQLVLEQNELYVKEAQNNIVLSVLEAYLQA 146 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E I++A ++ + + +F GA +K+ L+++E + + + +I + + Sbjct: 147 LFKYENITVAKNTALSSQEELAQARKRFENGAIAKIDLIEIETQNANNQYNIIQAQNQYE 206 Query: 228 MNVHNISTLLGYP-ATEF-LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 V + LL P T+F + +QK+ N +P I I ++ P+ + EK+ Sbjct: 207 TQVLALKQLLELPVGTDFRIQIIQKEEVN-EP---IENKEVIFQQALQQLPNTKIYEKQK 262 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTH------WSFGPKLYLPIFDKG 338 + I IAKS P+LSL+ + + N Y T + G L +PIF + Sbjct: 263 EIAQKDIQIAKSGFLPTLSLSAGVNTGYSNRAEVNYRTQLDNNFGQTVGLSLNVPIFSRY 322 Query: 339 KIKSNIRRAESS 350 K + N+ A+ S Sbjct: 323 KNRDNVTLAKIS 334 >gi|193212965|ref|YP_001998918.1| outer membrane efflux protein [Chlorobaculum parvum NCIB 8327] gi|193086442|gb|ACF11718.1| outer membrane efflux protein [Chlorobaculum parvum NCIB 8327] Length = 470 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 104/494 (21%), Positives = 198/494 (40%), Gaps = 91/494 (18%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEY--TKPHMPL-LPTQFSIGNSKNLINIDTLKWWESFN 57 M++LR LF+ L C P + TKP +P + L+ Sbjct: 1 MSLLRFFIPLFLTL---CLAWPAFAETKPETEAEMPVGSEQPKAAPLV------------ 45 Query: 58 DTSLNKLVKIALQQN--LTILQATERINAAKENILSVRADLFPSSYASISHR-------- 107 SL+ V+I LQ N L I + +R+ A + + A++ P +S+++ Sbjct: 46 -ISLDDAVRIGLQHNRQLEIARLDKRM--AGQKVRESWAEVLPHLSSSLTYTRTLKPSVI 102 Query: 108 FIPNLKTNSTG-----QLDSDWKIDLFGQRRHIESSLANLD--------SAYAQVDIAKL 154 F+P+ TG ++ SD SS+A+L+ SA+A + + L Sbjct: 103 FLPSTIFGGTGGTQAIEISSD------------NSSVASLNLNQNIFKLSAFAGIKASGL 150 Query: 155 --------------NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 V++ + +Y D E + Q + +++ + F QG Sbjct: 151 VREISDESYRNTNAEVVTSIRRAYYDVLIAAENRKLVEQSIARWEQAQRDTDALFRQGVA 210 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 + + +K +++++ D+ + + ++G L S F Sbjct: 211 ADIDTLKAWLSVENLKPDLIRARHGESIAATKLKVVMGIEQDTPLAL--SDSLAFTE--- 265 Query: 261 IPINIGIPA---DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH-DN 315 IP+ G+ A + + NRPD+R ++ K+ A+S+ P LS G + A T D+ Sbjct: 266 IPVPQGVAAAYREALDNRPDVRSLGLQVEAENEKVTAARSEGLPVLSAFGQLQAQTQFDD 325 Query: 316 SFPGYNTHW----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 +T W S G +L +PIF S I +A+ + +Q +++ +VE Sbjct: 326 DTALDSTRWPVSSSVGLQLSVPIFSGFATSSRIEQAKINRLQQRTRYEDLKAQVRADVEV 385 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 L+++ E +K + + + ++S ++ + R+G S L++ D E+ L A Sbjct: 386 RLSNLIEARKRIDVQSKTIAVAERSYRITRLRLREGIGSRLELTD-------AELQLQTA 438 Query: 432 KRQLAKSYVDLYIA 445 K ++ D IA Sbjct: 439 KTNYLQAVYDYLIA 452 >gi|300936546|ref|ZP_07151455.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 21-1] gi|300458309|gb|EFK21802.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 21-1] Length = 461 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 89/483 (18%), Positives = 181/483 (37%), Gaps = 70/483 (14%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWWESFNDTSL 61 +LAGC P+ T+ ++ +DT +WW ++D L Sbjct: 1 MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQL 50 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFI 109 L+ ALQ + A +RI A+ +V P S + F Sbjct: 51 TSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSAEGLMGPFA 110 Query: 110 PN---------LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISK 159 N TN T L + W +D++G+ R + + L + + A+ + + + Sbjct: 111 LNDPAAGTTGPWYTNDTFGLTAGWHLDIWGKIRAEVTARLGTVKARAAEREQTRQLLAGS 170 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + + ++ QI I + G TS + V+ + + Sbjct: 171 VARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSAVEGVETDINASKTRQQL 230 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNR 275 + ++ +S L + Q +S +P + +P +L + R Sbjct: 231 NDVAGKMKIIEARLSALTNH---------QTKSLKLKPVALPKVASQLPDELGYSLLARR 281 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYL 332 D++ + S++ I AK+ YP ++L + AL + F L L Sbjct: 282 ADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTL 341 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K QH ++ Sbjct: 342 PIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQI 398 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIG 447 +L ++ Q R++ I + A++ + + + Q + + L A+G Sbjct: 399 EHD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALG 456 Query: 448 SGY 450 GY Sbjct: 457 GGY 459 >gi|77917979|ref|YP_355794.1| outer membrane channel protein [Pelobacter carbinolicus DSM 2380] gi|77544062|gb|ABA87624.1| outer membrane channel protein [Pelobacter carbinolicus DSM 2380] Length = 500 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 73/411 (17%), Positives = 177/411 (43%), Gaps = 41/411 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + +AL+ N + + + + +A+ + + D P AS+ + + G Sbjct: 84 TLKQALGVALKHNQALRLSADEVRSARVALRQQKDDFLPE--ASLEATAGGGHEQGAVGS 141 Query: 120 LDSDW---------KIDLF---GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 D ++ K++LF + ++ + NL + ++ + ++ + +Y+DA Sbjct: 142 -DRNYHALSAEVAVKVNLFNGFADQAALDQADKNLSARQQDLNRQQQTLVFDTVSAYLDA 200 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 E+I +A Q L+ ++ + G + K AE SD+ T ++ + Sbjct: 201 VKSLEQIQVAQQTLEDNRRQLADIEAYHRVGRRPITDVYKQRAETAQARSDLLTAQRDYA 260 Query: 228 MNVHNISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + +LG AT + + + P+ + +G+ + RPD+ +EK+ Sbjct: 261 VSKLALKQVLGVEATTDYEVVLPEDVALRLAPSTDLESLLGLAR---KQRPDLLAREKER 317 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGY----NTHWSFGPKLYLPIFDK 337 + A++ +AK+ +P++ L+ + + D++F N + L +P+FD+ Sbjct: 318 LAAEAQVKVAKAGAWPTVDLSAGVGTGYDSRSDSAFGSQMDEDNLYGKASVDLNIPLFDR 377 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA----LTSINEDKKIVTKLQHAVELH 393 ++ + +A + + W++ E+ A LT++++ + +L +A Sbjct: 378 HLTRNEVAQARINRHSIDVEWEQLQCQVEVEIGQALQEYLTALDQLEVARAQLTYA---- 433 Query: 394 KKSMSLSMINYRQGRYSLLDILD-----IERATAKVEVDLSIAKRQLAKSY 439 + ++ + YR G +L ++ D +E A +E + R +A +Y Sbjct: 434 QDALDSTRQRYRVGAATLTELTDARSTFVESRYALLEAQIDRMMRTVAMAY 484 >gi|256424309|ref|YP_003124962.1| outer membrane efflux protein [Chitinophaga pinensis DSM 2588] gi|256039217|gb|ACU62761.1| outer membrane efflux protein [Chitinophaga pinensis DSM 2588] Length = 429 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 36/320 (11%) Query: 140 ANLDSAYAQVDIAKLNV-------ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 AN++SA V AK N+ ++ Y + ++ I+I +L K N E + Sbjct: 117 ANVESAKRAVQYAKDNIEYNRAQMAYQVAVIYYQIVYLQKAIAIQDSVLAFLKANKEDTE 176 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF--RMNVHNISTLLGYPATEFLHYMQK 250 +K G + ++ +++ I + LE S + N+ ST + +MQ Sbjct: 177 IKLKHGDALRYDVLSIQSTIDQENNTRIDLENSLLKQYNLLQYSTGSTAANGKDFDFMQA 236 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 N + +NI ++ P+ + +++ S A + I+K PSLSL+ S Sbjct: 237 NENKQEA-----LNIAQ-----QHNPEYTLLKDRISQSEAGLDISKKAGLPSLSLSASTG 286 Query: 311 LTHDNSFPGYNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ---ETVLN 364 + P N +++ G L +PI+ + + A+S +E + Q TV N Sbjct: 287 FA-NGYMPDLNQFRYNYAGGVTLSVPIYQGARARRQRSLAQSQLKEANLGMQTLNNTVQN 345 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD-------I 417 IK+ A T I ++ + VE K++ L+ YR G + L++ + Sbjct: 346 DIKQ---AYTDIESNQSRLVNAMEQVEEAKEAQKLAQSRYRNGTGTNLELTNASTNVQRA 402 Query: 418 ERATAKVEVDLSIAKRQLAK 437 ER+T + L +A+ +LA+ Sbjct: 403 ERSTLQYTYQLCLARLELAR 422 >gi|171321238|ref|ZP_02910205.1| secretion protein HlyD family protein [Burkholderia ambifaria MEX-5] gi|171093474|gb|EDT38650.1| secretion protein HlyD family protein [Burkholderia ambifaria MEX-5] Length = 304 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + IR+AE++ + ++ VL A+++V+NAL D+ L AV+ + ++ L Sbjct: 173 VPQQIRQAETA-----LAYRRAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGALEL 227 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + YR+G LD+LD ER ++ Q V LY A+G G+ Sbjct: 228 ARDRYRKGLSPFLDVLDAERQWSQGRQQAVEGALQTTTDLVALYKALGGGWQ 279 >gi|326801521|ref|YP_004319340.1| outer membrane efflux protein [Sphingobacterium sp. 21] gi|326552285|gb|ADZ80670.1| outer membrane efflux protein [Sphingobacterium sp. 21] Length = 462 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 50/325 (15%) Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISHRFIPNLKT 114 AL+ NL + QA + + ++E++L + DL+PS S+ + R + T Sbjct: 42 ALRNNLQVKQAVFQSSLSEEDVLQAKMDLYPSVSGTVQGSKNWGLSFDQTAGRLLNTSVT 101 Query: 115 NSTGQLDSDWKIDLFGQRRHIESSLAN---LDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +G + LFG + + AN L S VD K +++ +++ Y++A K Sbjct: 102 --SGGASVTGNMLLFGGFQKVNQIKANKYQLLSNQTNVDKVKNDLVLQVVTKYLEALSNK 159 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + + A Q + L + +E + G + L + ++++ + E ++ T + ++ +++ Sbjct: 160 DMATAAKQQVALSTEQLEAQKYNYEVGNKTLADLSQAKSQLATDELNLVTAQNAYDLSIL 219 Query: 232 NISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ L+ P + ++K P++ ++ + D+ ++ PDI+ E Sbjct: 220 DLKQLMEMNPVNDIA--LEKPP---LPDVAKLVSSYVAEDIYQEAVQQYPDIKVAEYNTL 274 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD---------NSFPGYNTHWSFG---------- 327 ++ I IAK YP LS+ + N P T+ SFG Sbjct: 275 VALKNIDIAKGGFYPQLSIGAGYGTNYSSQAAITEIINGVP-ITTYPSFGRQLDRNKNTN 333 Query: 328 --PKLYLPIFDKGKIKSNIRRAESS 350 +L +PIFD + +R+A+ S Sbjct: 334 VFAQLSIPIFDNYRRNITLRKAKIS 358 >gi|300978669|ref|ZP_07174359.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 45-1] gi|301048872|ref|ZP_07195866.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 185-1] gi|300299327|gb|EFJ55712.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 185-1] gi|300409601|gb|EFJ93139.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 45-1] gi|315294496|gb|EFU53844.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Escherichia coli MS 153-1] Length = 461 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 91/487 (18%), Positives = 185/487 (37%), Gaps = 78/487 (16%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL------------KWWESFNDTSL 61 +LAGC P+ T+ ++ +DT +WW ++D L Sbjct: 1 MLAGCA----------PMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQL 50 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------SYASISHRFI 109 L+ ALQ + A +RI A+ +V P S + F Sbjct: 51 TSLINNALQSAPDMQVAEQRIQLAEAQAKAVATQDGPQLDFSADMERQKMSAEGLMGPFA 110 Query: 110 PN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISK 159 N TN T L + W +D++G+ R I + L + + A+ + + + Sbjct: 111 LNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEITARLGTVKARAAEREQTRQLLAGS 170 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + + ++ QI I + G TS ++ +E+DI Sbjct: 171 VARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDI 221 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ------PNL--YIPINIGIPADL 271 R +++++ + Q+ + + P + +P +G L Sbjct: 222 NA--SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKTVALPKVASQLPDELGY--SL 277 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGP 328 + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 278 LARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTA 337 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K QH Sbjct: 338 GLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQH 394 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLY 443 ++ + +L ++ Q R++ I + A++ + + + Q + + L Sbjct: 395 QAQIERD--ALRVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASIQLT 452 Query: 444 IAIGSGY 450 A+G GY Sbjct: 453 GALGGGY 459 >gi|71906815|ref|YP_284402.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] gi|71846436|gb|AAZ45932.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] Length = 429 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 72/377 (19%), Positives = 151/377 (40%), Gaps = 28/377 (7%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L++ ++ Q+N ++ A R AA E ++ + A P+ S++ + + S G L Sbjct: 46 LSEAEQMVEQRNRALISA-RRATAAGEAVVDM-AGARPNPVVSLNTSGFNSRSSGSGGNL 103 Query: 121 DSDWKIDL-------FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 D+ +ID G R + SL + + + + ++++L +Y D + +++ Sbjct: 104 DTTLRIDQPIERGNKRGLRLAVADSLLQANRSDESDSLRQQRLLARL--AYFDLKAAEDK 161 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + +A++ L ++ + + L+ G S + ++ + IESD + R + + Sbjct: 162 LRLANESAQLARQILAKADLRLRAGDLSAADVARIRTDTLKIESDAVQAQVDLRRSRLAL 221 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPI--NIGIPADLIRNRPDIRYQEKKLADSVAK 291 + LL M+K++ P + I I RPD+ ++L + Sbjct: 222 AQLLA---------MEKEAARLATADPWPAFSRLAITTPEIEMRPDVIAARQRLEAAERS 272 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 I +AK+ ++L + P +G + +P+F + IRRA Sbjct: 273 IQLAKAQQVRDVTLGAQV-----ERAPDDRNRSVYGVGVSVPLFTGYDYRGEIRRAHVDR 327 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYS 410 + A E E + LQ A+ +K+ + ++ + G S Sbjct: 328 DSALDELERVRATAAAEFEQFTFEAERMSERARSLQDEALPAARKAHAAVVLAFNHGAAS 387 Query: 411 LLDILDIERATAKVEVD 427 LD++D R+ +E D Sbjct: 388 ALDVIDARRSLFAIETD 404 >gi|313673852|ref|YP_004051963.1| outer membrane efflux protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940608|gb|ADR19800.1| outer membrane efflux protein [Calditerrivibrio nitroreducens DSM 19672] Length = 412 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 93/403 (23%), Positives = 185/403 (45%), Gaps = 25/403 (6%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP-----SSYASISHRFIPNLKT 114 S+ + V+ L+ I + ++ K +I S R D P SSY+ I+ PN++T Sbjct: 20 SVEEAVEKGLKNFPDITISNREVDIQKFDIDSARGDFMPKLTFSSSYSHINPDDSPNMRT 79 Query: 115 -NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPS-YIDARHFKE 172 N+ +L + + + ++ S NL +D + N+++K I S Y DA +K Sbjct: 80 FNNELRLTYNLFSGFYSMNK-LDISRYNLQIKETTLDSTR-NLVAKNIKSAYFDALMYK- 136 Query: 173 RISIAHQILDLYK---KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 +I + + DLYK K E + KF G + ++K ++K ES +E+ + N Sbjct: 137 KIYMFYD--DLYKSAVKTYEFTKTKFEAGRALSIDVLKSLTDVKKYES--KKVEQ--KSN 190 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + N T+L Y E + S++F L + + I P++ E K+ S Sbjct: 191 LLNSLTILSYYTDEVYDINTELSSDFYE-LDLKERDYYLSKFIEKNPELAGFESKIKSSD 249 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPKLYLPIFDKGKIKSNIRR 346 A++ +S P++ L G+I+ D G + SFG L +F+ K K++ + Sbjct: 250 AQLKQTRSSFMPTIDLFGAIS-REDAKKGGMESDTNSSSFGVSLSWNLFNGFKDKNDYEK 308 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 + + ++ V ++ +++ + K+ + ++ V++ +++ SL+ Y Sbjct: 309 QKLNYYNTLDQKRKFVNDSKRDIAVYYNKLLSAKENLVYMKELVKVAEQNFSLTSEAYEL 368 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIAIGS 448 GR +L+++L + ++DL + +SY++L YI G+ Sbjct: 369 GRANLIELLRAKDELTSAKIDLINLLNSITQSYLNLEYITGGN 411 >gi|254422898|ref|ZP_05036616.1| outer membrane efflux protein [Synechococcus sp. PCC 7335] gi|196190387|gb|EDX85351.1| outer membrane efflux protein [Synechococcus sp. PCC 7335] Length = 674 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 81/401 (20%), Positives = 168/401 (41%), Gaps = 57/401 (14%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS--------SYASISHRFI-- 109 +L + V++A + N ++ A + A + RA L P + S F+ Sbjct: 273 TLEQAVELAYRNNQSLQAALLSLEQATAAVREARAALLPGIDVTANAITQESTRADFLEE 332 Query: 110 -PNLKTNSTGQLDSDWKIDLFGQRR------HIESSLANLDSAYAQVDIAKLNVISKLIP 162 + T +G + ++ + G RR ++ ++ L Q DI +L + Sbjct: 333 PSGIDTLVSGSTEINYDVFTGGARRASIRAAELQEEISTLAVEVQQEDI-RLTTAN---- 387 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y D + E+I I L+ +N+ S L+ G ++ ++ E + + + Sbjct: 388 AYYDLQDAGEQIRINQSFLEEAARNLRDSRLRQEVGVGTRFDTLRAEVQFANARQAVIQA 447 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI--PADL-------IR 273 + R+N I+ +L P T + P+ + P DL + Sbjct: 448 QSQERINRRAIAQVLNLPPTATIATT-------------PVAVAENWPLDLEESIVLAFQ 494 Query: 274 NRPDIRYQ--EKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGYNTHWSFGPKL 330 NR ++ Q + L+D KI +A + PS+ L + A T N G +SFG + Sbjct: 495 NRAELEQQLYQADLSDEQRKIALAA--IRPSVQLFANYSAQTFINDNDGVTDAYSFGARF 552 Query: 331 YLPIFDKGKIKSNIRRAESSAQ---EQYITWQETVLNAIK-EVENALTSINEDKKIVTKL 386 FD G +++ R+ E ++Q EQ+ + L+ ++ +VE A ++ +++ + Sbjct: 553 VWNPFDGGAARASARQQEIASQIAEEQF----SSNLDEVRFDVEQAFFNLQANQENIATS 608 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 + AV +++++L+ + + G + LD+L + + E + Sbjct: 609 EVAVVQAEEALALANLRLQAGVGTQLDVLSAQSELTEAEAN 649 >gi|167587393|ref|ZP_02379781.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 221 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 5/145 (3%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALTH--DNSFPGYNTHWSFGPKL 330 PD+ + I +AK+ YP++ L G +T + N W+ GP L Sbjct: 1 PDVVAARWTVDAQARGIDVAKAAFYPNIDLLATVGGFGVTAPFADFLRAMNGGWTAGPAL 60 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIF+ G++++ + A + + + +T++ A+K++ + + I +V Sbjct: 61 SLPIFEGGRLRAQLGAASAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSV 120 Query: 391 ELHKKSMSLSMINYRQGRYSLLDIL 415 + +S LS +R+G +++L Sbjct: 121 AANDRSYHLSREGFRRGLTDYVNVL 145 >gi|167722787|ref|ZP_02406023.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei DM98] Length = 219 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 6/195 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 19 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 78 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 79 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 138 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 139 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 198 Query: 226 FRMNVHNISTLLGYP 240 N + ++ L G P Sbjct: 199 RTENRNALAILFGRP 213 >gi|295095904|emb|CBK84994.1| hypothetical protein ENC_11390 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 126 Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 13/108 (12%) Query: 4 LRAIFSLFIV-LLAGCT---VGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFN 57 LR I L I+ +LAGC V P + H+P T ++ L WW +F+ Sbjct: 3 LRPIAGLLIMTILAGCQSVDVEPAKSSLHIPAQWRATSGPASPTEQL-------WWRNFH 55 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 D++LN+ V AL+ N +L A ERIN + + + LFPS A ++ Sbjct: 56 DSNLNRYVDQALKNNSDVLIARERINEYQARVYAADGSLFPSLDAGVT 103 >gi|304436979|ref|ZP_07396942.1| type I secretion outer membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369930|gb|EFM23592.1| type I secretion outer membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 462 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 17/269 (6%) Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++I +Y +A +++I + +D Y ++ + + GA +K+ +++ E+ + + Sbjct: 135 EVIAAYWNAAEAEKKIEVQRDSVDKYDAHLRNVNALYEAGAQAKIDVIRSSVELSNARQE 194 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI----RN 274 + E S+ +N+ + LL E L + + Y P + D I R Sbjct: 195 LIRAESSYEVNLAALRNLLNIDRAEPLQLTTEVT-------YEPFGTALT-DCISYAQRT 246 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPGYNTHWSFGPKLY 331 R D+ Q + L + IA++ P+++L LT +S + S G + Sbjct: 247 RLDLAAQRETLQQRELAVDIARAGKKPTVNLTLGTGLTSQFRPHSDTSSDVSASVG--VN 304 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 IFD G +S I AE+ + ++T + + A ++ E ++ T AV Sbjct: 305 WNIFDSGVTRSAIEAAEAERDIALLNVKKTEESIDLNLRQAYLNMREAEQRFTSTGDAVR 364 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ ++ YR G LLDILD + A Sbjct: 365 QAEEDYRIASERYRAGEGILLDILDAQTA 393 >gi|218262810|ref|ZP_03477168.1| hypothetical protein PRABACTJOHN_02848 [Parabacteroides johnsonii DSM 18315] gi|218223105|gb|EEC95755.1| hypothetical protein PRABACTJOHN_02848 [Parabacteroides johnsonii DSM 18315] Length = 460 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 88/433 (20%), Positives = 174/433 (40%), Gaps = 58/433 (13%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI---------- 109 + K ++IAL +N T+ A + I K A LFP S+A+ +R + Sbjct: 36 IGKALEIALSENPTVKVANKEIQKKKYAQKGSYAALFPQVSFAADYNRTLKKQVMYMDGF 95 Query: 110 -------------PNLKTNSTGQLDSDWKIDLFGQRRHIESSL--------ANLDSAYAQ 148 PN+ D++W + + ++L +++ A Q Sbjct: 96 DMGSTEIPGMEDMPNMDEGIEVGRDNNWNLGFNASMPIVNAALWKSLSISAVDVELAIEQ 155 Query: 149 VDIAKLNVISKLIPSYIDA-------RHFKERISIAHQ-ILDLYKKNIELSHLKFTQGAT 200 +K+ +++++ Y R FKE A + LD+ +K F QG Sbjct: 156 ARSSKIAMVNQVKKGYYGVLLANDSYRVFKESYDNAMENYLDIKRK--------FEQGTV 207 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 ++ L++ +K+ E ++ E + + + LLG + + Q +F+ +L+ Sbjct: 208 AEYDLIRANVTVKNSEPNMLQAENALVLAKWQLKALLGIDLDINIE-CEGQLTDFEKDLF 266 Query: 261 IPINIGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---SIALTHDNS 316 + D + N D++ + + + + K D P+LSL G A+ +D Sbjct: 267 GDF---LSTDTTLANNTDLKQMDLQAKQLEKTLTMQKFDYLPTLSLTGLYQWTAMNNDFK 323 Query: 317 FPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT 374 F Y N + G L +PIF G I++ +S ++ + ++T N ++ + Sbjct: 324 FKDYMWNPYSMVGVSLSIPIFSGGSKFYKIKQTRNSIEQLSLQREDTQRNLQLAIKQYID 383 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 ++N K Q VE ++ +S Y G +LL++ D E A + +++ + A Sbjct: 384 NMNTCVKRFDASQKGVEQAERGYMISQKRYDTGAGTLLEMNDSELALTQAKLNFNQAIYD 443 Query: 435 LAKSYVDLYIAIG 447 + DL +G Sbjct: 444 YMVAKADLEKVLG 456 >gi|296272804|ref|YP_003655435.1| outer membrane efflux protein [Arcobacter nitrofigilis DSM 7299] gi|296096978|gb|ADG92928.1| outer membrane efflux protein [Arcobacter nitrofigilis DSM 7299] Length = 477 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 100/438 (22%), Positives = 181/438 (41%), Gaps = 64/438 (14%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF 108 WW F+D LN L++ A++ ++ Q + A I + ++ P+ + RF Sbjct: 54 WWRDFDDKQLNILIENAIKNAPSLKQLEAKYQKANNIIKAKKSSNLPNVNFESQATRQRF 113 Query: 109 IPN------LKTN-----STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ---VDIAKL 154 N L N TG L + D + QR + + N A AQ + + +L Sbjct: 114 SENYIFPEPLGGNYYNLYQTG-LKLQYDFDFWNQRASLIKASKN--EALAQDALIKVKQL 170 Query: 155 NVISKLIPSYIDARHFK-----------ERISIAHQIL-DLYKKNIELSHLKFTQGATSK 202 + + + YI + +FK + + H IL DLY NI LS+ + + S Sbjct: 171 AISTSISKLYI-SWNFKIEKLKKLSTLKKLVYEKHHILNDLY--NIGLSNEE--KVNESN 225 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + K+ +I +++ +I ++ S + I+ LL E +P++ Sbjct: 226 YLIEKINQDILNVKEEIENIKNSIAV----IAGLLPSQINELK----------KPSISNK 271 Query: 263 INIGIPADL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 I +P D+ + + P + Q+ LA I AKS YP++SL G L H SFP Sbjct: 272 YRISVPQDIRLNVVSHLPQVAVQKYLLASKKQYIENAKSKFYPNISLTG---LLHFTSFP 328 Query: 319 GYN--THWSFGPK----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 SF P+ LPIFD + +SN+ + Q + ET++ A+ + Sbjct: 329 FSQLLKESSFDPEAGLAFSLPIFDAKRRESNLNTKVNDYNAQVYAYNETIIKAVNNIVTT 388 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L I +K + + K+ ++ Y G + +D ++ + ++ + Sbjct: 389 LKKIQLNKSQEKSEKIVIFNKNKNKNIEKRVYELGIKNKIDFINKNTELEEEKIKEIALQ 448 Query: 433 RQLAKSYVDLYIAIGSGY 450 + + ++DL A+G GY Sbjct: 449 EKKFQLHIDLIEALGGGY 466 >gi|300779373|ref|ZP_07089231.1| outer membrane efflux protein [Chryseobacterium gleum ATCC 35910] gi|300504883|gb|EFK36023.1| outer membrane efflux protein [Chryseobacterium gleum ATCC 35910] Length = 436 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/262 (19%), Positives = 120/262 (45%), Gaps = 25/262 (9%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y++ +E I +L + ++ + G+ SKL+ +++++++ + ++ Sbjct: 142 AYLNILMNQENIISLENVLKTTQTQLKQGDQLYKAGSLSKLNYLQIQSQVAQDQYNLTAA 201 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN-----RPD 277 + + R N N+ +L P+ ++ P+ + N P ++N RP+ Sbjct: 202 QNNLRTNTVNLKQILQLPSDYDFQIVK-------PDSIMVDNQLKPLQDVQNLAQDQRPE 254 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY------NTHWSFGPKLY 331 ++Y E + +S + +A++ + P+LSL G+I+ + N Y N + G L Sbjct: 255 VKYGELNVENSNTNLKMARASIQPTLSLTGNISTNYSNGNGNYFNQLGNNFYMPVGLSLG 314 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITW--QETVLNAIKE-----VENALTSINEDKKIVT 384 +PI++ K+ I +++ + ++ + TVLN E ++NAL+ + K + Sbjct: 315 IPIYNNRIYKTQIEKSKIAIEQANLDLLNTRTVLNQQIEQSYINLQNALSQYDSAFKQMD 374 Query: 385 KLQHAVELHKKSMSLSMINYRQ 406 + + ++ M + I+Y Q Sbjct: 375 ISKQSYDIVNAQMKIGSIDYVQ 396 >gi|167723571|ref|ZP_02406807.1| outer membrane efflux protein OprB [Burkholderia pseudomallei DM98] Length = 257 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/235 (20%), Positives = 106/235 (45%), Gaps = 15/235 (6%) Query: 50 LKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---------- 99 + W E F D L +L++IAL+ N + + + A++ RA LFP+ Sbjct: 24 IGWREFFVDPRLQRLIEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQ 83 Query: 100 -SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVI 157 + A +S P + + + W++DLFG+ + + + +LA + A+++++ Sbjct: 84 RTPAGVSITGQPLISRTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLV 143 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + + Y+ + + + L + + +L+ L+F G S+L L + + +++ + Sbjct: 144 ASVADQYLTLLSTDDLLQVTQNTLKSARASYDLTKLQFDNGTGSELDLRQAQTVVETALA 203 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 ++ ++ + L+G P + L N Q NL I G+P+DL+ Sbjct: 204 SQQAQARARAQALNALVLLIGEPLPDDLP--AGLPLNAQ-NLLTDIPAGLPSDLL 255 >gi|114763047|ref|ZP_01442477.1| nodulation protein (outer membrane efflux protein) [Pelagibaca bermudensis HTCC2601] gi|114544371|gb|EAU47379.1| nodulation protein (outer membrane efflux protein) [Roseovarius sp. HTCC2601] Length = 96 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 LA CTVGPEY P L F+ G+++ + WW +FND LN+LV+ L Q T Sbjct: 15 LAACTVGPEYQAPS-ETLAVAFAEGSAQPIGQAAQQYWWRAFNDNMLNELVQTGLDQTST 73 >gi|189459622|ref|ZP_03008407.1| hypothetical protein BACCOP_00248 [Bacteroides coprocola DSM 17136] gi|189433704|gb|EDV02689.1| hypothetical protein BACCOP_00248 [Bacteroides coprocola DSM 17136] Length = 439 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 83/375 (22%), Positives = 161/375 (42%), Gaps = 31/375 (8%) Query: 61 LNKLVKIALQQNLTI-LQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 L + + A+ NLTI LQ +R +K + + + P S SH F Sbjct: 25 LKQCIDHAIANNLTIKLQEAQR-EQSKVELSTAKNSFLPDLNGSASHSFNFGRSLQADNT 83 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRRHIES---SLANLDSAYAQVDIAKLNVISKLIPSYI 165 +L T +TG L+ I LF + I + S NL +A ++ AK ++ ++ +Y+ Sbjct: 84 YQSLNTQNTG-LNLSTSIPLFSGLQKINNVALSKLNLQAAMEDLNKAKEDISIQVASAYL 142 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E + +A++ L L K+ +E + G S+ + +A + E E + Sbjct: 143 QVLFNEELVKVANEQLALSKEMLEQKTAFYKNGKASQAEWYEAKARVAQDELSAVQAENN 202 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKK 284 R+++ ++S LL P+ + + +++ L I + + A+ + +P ++ + + Sbjct: 203 RRLSLLDLSQLLELPSPDDFAIVSPATDSI-AGLKIQTSPAEVYAEAVLTKPSVKAAQYR 261 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS----------FGPKLYLPI 334 L + I +AK YP LS I+ N N ++ G L +PI Sbjct: 262 LEGAEKSIRMAKGAYYPQLSFGAGISTNFYNVSDMENGNFGSQLRDNFSQYIGFSLSVPI 321 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELH 393 F++ + ++ +R A Y +E+ N KE++ A ++N + + + L A E Sbjct: 322 FNRFETRNRVRSARIQQHTYYWQLEESKKNLYKEIQQAYYNAVNAETQYQSSL-TADEAA 380 Query: 394 KKSMSLSMINYRQGR 408 + S L Y G+ Sbjct: 381 QASFLLMKEKYTNGK 395 >gi|167741764|ref|ZP_02414538.1| outer membrane efflux protein [Burkholderia pseudomallei 14] Length = 239 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 6/195 (3%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN 111 WW F D L++L+ AL+ N + A R+ A+ +L P+ + Sbjct: 30 WWRRFGDPMLDRLIDDALRTNNDLAAAAIRVYRAQLQAGLADTNLTPNVTLGATGNASRT 89 Query: 112 LKTNSTGQLDS-----DWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 L T+ T + +++DL+G+ +++ L++ A D A+L +I Y Sbjct: 90 LDTHQTRRTSGVTATLGYELDLWGKLAAQRDAARWELEATQADRDAARLALIGTTAALYW 149 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + ++I+ + ++ ++L + GATS L L + E + ++ +D L + Sbjct: 150 QLAYLNQQIAFGDANIAYAERTLKLVQSRHAAGATSGLDLAQAERNLAALRADQTQLIQQ 209 Query: 226 FRMNVHNISTLLGYP 240 N + ++ L G P Sbjct: 210 RTENRNALAILFGRP 224 >gi|323698159|ref|ZP_08110071.1| outer membrane efflux protein [Desulfovibrio sp. ND132] gi|323458091|gb|EGB13956.1| outer membrane efflux protein [Desulfovibrio desulfuricans ND132] Length = 452 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 29/259 (11%) Query: 209 EAEIKSIESDIPTLEKSFRMNVHNIST-------LLGYPATEFLHYMQKQSNNFQPNLYI 261 +AE+ E D+ T ++ +N+ST LL P + Y+ + YI Sbjct: 193 KAEVLDAEVDLATSKQELLKARNNVSTQEAQLNTLLNIPLEAPIKYVGELK-------YI 245 Query: 262 PINIGIPADLIR---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 P ++ + LIR +RPD+ +K + + + +++S YPS+ NG P Sbjct: 246 PFDLTLKECLIRAYDHRPDLIIGQKSVEMAQKDVTMSESSFYPSV--NGHWDYVTRGDDP 303 Query: 319 GYNT----------HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 N +W+ G + IF G + ++ + ++ + T LNA E Sbjct: 304 AVNGNGYISERSGEYWTAGVDATMDIFSWGSDYYDSKKYDEMVKQMEADLENTRLNAGFE 363 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 V++A+ ++ E ++ + +V +++ +++ Y+ + D+L+ + + E L Sbjct: 364 VKSAILNLQEAADRISVAKKSVVAAEEAYRMAVARYQAQVGTNTDVLNAQERLSLAEAQL 423 Query: 429 SIAKRQLAKSYVDLYIAIG 447 S A + LY+A+G Sbjct: 424 SQALADYGTAVSKLYVAMG 442 >gi|167588590|ref|ZP_02380978.1| hypothetical protein BuboB_24864 [Burkholderia ubonensis Bu] Length = 167 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Query: 290 AKIGIAKSDLYPSLSL--------NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 A I A++ YP ++L G AL H NS GP + LPIF+ G+++ Sbjct: 13 AGIDAARAAFYPDVNLLAFAGVQSFGFRALLHGNS-----GTVGAGPAITLPIFEGGRLR 67 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R ++ + +T++NA+ +V +AL I+ + + A+ +++ + Sbjct: 68 AGLRAQTAAYNAAVAEYDDTLVNALAQVSDALVQIDALGRQRALRREALTRAQRTYDIET 127 Query: 402 INYRQGRYSLLDIL 415 YR+G L++L Sbjct: 128 QRYRKGISGYLEVL 141 >gi|85709480|ref|ZP_01040545.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. NAP1] gi|85688190|gb|EAQ28194.1| RND efflux system, outer membrane lipoprotein, NodT [Erythrobacter sp. NAP1] Length = 470 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF 326 +P++L+ NRPD+ +LA S A + A +P LSL+ I L N+ ++ Sbjct: 276 LPSELLANRPDVVAAAAELAASDADLAAAARARFPRLSLSAVIGLLAFNAGDFFSEDSIV 335 Query: 327 G---PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI-NEDKKI 382 G + P+ D G+I++ I A ++ + + ++ V A+ + E A I D + Sbjct: 336 GTLTAGVAAPLLDFGRIEAEIDGAAANKRAAFQAYRGAVFQALGDAEAAYGLIAASDAEA 395 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +Q EL + + SL+ YR G S L++L+ RA + A + ++ + L Sbjct: 396 TLAVQERDELQRAA-SLANDRYRAGLASFLEVLEARRAADASGERAAAALGRAERARILL 454 Query: 443 YIAIGS 448 + A+G Sbjct: 455 WQALGG 460 >gi|88801669|ref|ZP_01117197.1| putative outer membrane transport/efflux protein [Polaribacter irgensii 23-P] gi|88782327|gb|EAR13504.1| putative outer membrane transport/efflux protein [Polaribacter irgensii 23-P] Length = 442 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 93/409 (22%), Positives = 174/409 (42%), Gaps = 72/409 (17%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + V AL +N++I Q + AK N+ + + P+ AS S F L + +G Sbjct: 24 TLREAVDQALAKNISIQQNKLSVALAKSNVDVAKGNFLPNLNASSSGNFSSGLSPDQSGI 83 Query: 120 LDSDWKID----------LFGQRRHIES-SLANLDSAYAQVDIAKL-NVIS-KLIPSYID 166 L + + +F R+ + A L + D+ K+ N IS +++ +Y++ Sbjct: 84 LTNTNNFNGSFNLNSNGIIFNGFRNTNTFKQAQLGVESSLYDLKKMENDISLRVVNNYLN 143 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 KE + +A + KK I + +F G ++K L+ ++ + ++ E S Sbjct: 144 VLFAKENLEVAKIQAAISKKQIIAAQARFDAGLSAKGELLNFKSTAANDVQNVILQENSL 203 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-ADLIRNR---------- 275 + + NI+ LL PA F PI + P A+L+ + Sbjct: 204 DLALLNIAQLLQEPAEGFD--------------VAPIEVEAPSANLLYDNSSIVFSKSLA 249 Query: 276 --PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGYNTHWSFGPK 329 P+I + + ++ I IAK+ PSLS N ++ +N FP + SFG + Sbjct: 250 YMPEIANAKLDIENANFNIKIAKASFLPSLSYNIGAGTSYFHQFNNLFPT-QVNSSFGSQ 308 Query: 330 ------------LYLPIFDKGKIKSNIRR-------AESSAQEQYITWQETVLNAIKEVE 370 L +PIF++ + K+ + + +E+ + Q + ++T+ A +V+ Sbjct: 309 FADRFRYGAGISLNIPIFNRFQTKNRVAQSLINREISEARLEIQKLQLKQTIEQAFLDVK 368 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++L + E KI L+ +E K + NY G +L D D+ R Sbjct: 369 SSLKTF-EASKI--SLEAQIEAFKNAQ--ERFNY--GAMTLFD-FDLVR 409 >gi|188579219|ref|YP_001916148.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523671|gb|ACD61616.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 145 Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 58/110 (52%) Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R E+ A + TVL A++EV+ L+ +D + L+ A + + ++S + Sbjct: 24 ARVRATEAGADAALAQFDHTVLQALREVQTTLSRYAQDLDRLHLLEQAQQQAELALSQNR 83 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ GR L LD ER A ++ L+ A+ Q+++ + L++ + G++ Sbjct: 84 RLYQSGRTPYLSSLDAERTLATADMTLANAQAQVSQDQIQLFLTLDGGWD 133 >gi|295098154|emb|CBK87244.1| Outer membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 224 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 15/199 (7%) Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 +P +G +L+ RPD++ + S++++ A++ YP ++L + AL + F Sbjct: 31 LPSTLGY--ELLARRPDLQEAHWYIEASMSEVDAARAAFYPDINLMAFLQQDALHLSDLF 88 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 L LPIFD G++ +N+ A++ + + V++A+ +V + + Sbjct: 89 RSSAQQMGVTAGLTLPIFDSGRLNANLDIAQAQNNLSVANYNKAVVDAVNQVAR---TAS 145 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLA 436 E + + K QH ++ K + + + Q R+S I + AK+ + I L Sbjct: 146 EVETLTAKNQHQQQIEKDAARV--VALAQARFSAGIIAGSRVSEAKIPALKERITGLMLK 203 Query: 437 KSYVD----LYIAIGSGYN 451 YVD L A+G GY+ Sbjct: 204 GQYVDATLQLTSALGGGYH 222 >gi|254444028|ref|ZP_05057504.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198258336|gb|EDY82644.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 419 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 20/273 (7%) Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + + ++ + +Y+D R E +S + Y+ + + L+F G K L+ LE ++ Sbjct: 125 RQQLTAQTVKAYLDIRKAGEAVSAVDAGVKAYEAAVSNARLRFDAGQVLKSDLLSLEVKL 184 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPAT----EFLHYMQKQSNNFQPNLYIPINIGIP 268 + + ++ R+ + +LG PA E + + +P+ Sbjct: 185 AQTKEQLVEVQHFQRLARRAFAFVLGLPANGAEIELVEEDEALDRIVEPDTLD------- 237 Query: 269 ADLIRNRPDIR-YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 RP+++ +E+++A ++ +A P + S H W G Sbjct: 238 ---YSERPELQALREREVAAEQMRV-LASGGRKPRVMGFASYQYDHGWETTEGADSWLAG 293 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQE--QYITWQETVLNAIKEVENALTSINEDKKIVTK 385 + L +F+ GK +S IR+AE+ E +YI E L EVE A ++ K V Sbjct: 294 VSVNLDVFNGGKSESKIRQAEAQLSELREYIRKAE--LGIGLEVEQARLAVELAKDRVAV 351 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + A+ ++S SLS +++G +++ +E Sbjct: 352 AELALAQAEESASLSRSRFKEGALLTAELIGVE 384 >gi|103488061|ref|YP_617622.1| Type I secretion outer membrane protein, TolC [Sphingopyxis alaskensis RB2256] gi|98978138|gb|ABF54289.1| Type I secretion outer membrane protein, TolC [Sphingopyxis alaskensis RB2256] Length = 497 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 65/333 (19%), Positives = 132/333 (39%), Gaps = 37/333 (11%) Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 I ++ A ++S A + + +V + ++ Y+D + + Q + + + N++ S + Sbjct: 109 IRAADARVESGRANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLETNLQASRDR 168 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 F G ++ + + EA + + T ++ N +G PA + Sbjct: 169 FEVGDLTRTDVAQSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLE--------- 219 Query: 255 FQPNLYIPINIGIP-------ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 QP P G+P A I N P + + + + +A + P+LS+ G Sbjct: 220 -QP----PALPGLPKSPAEAVAIAIENNPQLLAAKADARAARYDVRVAGASRLPTLSVVG 274 Query: 308 SIAL-----THDNSFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQ 354 + T ++ PG T + G +P++ G + +RRA ES A EQ Sbjct: 275 NGGYNNYLGTLTSTLPGRVFQQAQTTATVGLSATIPLYQGGLPAAQVRRATAIESQALEQ 334 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 I + V + E A + + ++ + A+ ++ ++ G ++LD+ Sbjct: 335 IIFIERRV---VAEARAAYSRYQATQAVIQSSKAAIAANELALEGVRAENSVGTRNVLDV 391 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L+ E+ V L A+R + L A+G Sbjct: 392 LNAEQELLNSRVQLVTAERDAYVAGFTLLAAMG 424 >gi|224163123|ref|XP_002338524.1| predicted protein [Populus trichocarpa] gi|222872648|gb|EEF09779.1| predicted protein [Populus trichocarpa] Length = 276 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 16/184 (8%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI--NIDTLKWWESFNDTSLNKLVKIALQ 70 ++LAGC++ P + +P P +PTQ+ ++ ++ + TL W D L +LV +A Sbjct: 78 LVLAGCSLAPVHQRPQAP-IPTQWPQQDAAPVLSSSAATLDWNSFIADRQLRQLVDLAQA 136 Query: 71 QNLTILQATERINAAKENILSVRADLFPS---SYASISHRFIPNLKTNSTGQLDSDWK-- 125 N + Q + AA+ RAD P R ++ Q+ W+ Sbjct: 137 HNRDLRQTLLNVEAARALYQVQRADRLPGVGLQGGGTRQRLPGDMNATGQPQVQGSWQAG 196 Query: 126 -------IDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +DLFG+ R++ E++L + A++++ ++++ +Y+ R+ +A Sbjct: 197 LGLAAFELDLFGRVRNLSEAALGEYLATEEAARAARISLGAEVVQAYLSRDGALRRLQLA 256 Query: 178 HQIL 181 + L Sbjct: 257 QRTL 260 >gi|313158116|gb|EFR57521.1| outer membrane efflux protein [Alistipes sp. HGB5] Length = 461 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 84/398 (21%), Positives = 161/398 (40%), Gaps = 28/398 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------I 109 SL+ + AL N+ + Q ++ + + + P AS+ + I Sbjct: 47 SLDDCIGYALHNNVGVQQQALQVEQTDVKLSTSKYSRLPDLSASVGYNATFGRGTSDDNI 106 Query: 110 PNLKTNSTGQLDSDWKIDLF-GQR--RHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 T +G D + LF G R R I+ +L +A ++ A+ ++ ++ Y+ Sbjct: 107 RKTGTIQSGSFDVGASMPLFDGFRINREIKGGKLDLAAAMQDLERAREDLSINVMTLYLQ 166 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + KE IA + L+L + S G + + + EA + E ++ Sbjct: 167 VLYNKELTQIAERQLELSTQQAVRSRELVAAGKQPESARYESEALQANDELNLTQARNDL 226 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADL----IRNRPDIRYQ 281 R+ + N+S L + + Q ++ +L++ +G D+ NRP I+ + Sbjct: 227 RLALLNLSQALNRESAAGFDIVAPQFDSVALASLHM---LGTADDVYAYATENRPHIKAE 283 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNG----SIALTHDNSFPGY---NTHWSFGPKLYLPI 334 +L + + IAKS LYPSLSL G I T + +F N+ G + +PI Sbjct: 284 RLRLESAENAVRIAKSALYPSLSLRGGYGTGIYSTQEAAFGTQFRKNSSEFVGVSMSVPI 343 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F++ ++I A + ++Q + + + KE+E A + + A+ + Sbjct: 344 FNRRATHNSILSARIAMRKQQLAVTDAEQSLRKEIEQAWYNADAAYGKYRSADAALTSAR 403 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + + GR ++ D D + K E +L AK Sbjct: 404 VAFAYEQQKADAGRSTVFDFNDAKTRMEKAESELVQAK 441 >gi|78224652|ref|YP_386399.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] gi|78195907|gb|ABB33674.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] Length = 441 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/156 (19%), Positives = 72/156 (46%), Gaps = 1/156 (0%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 +R RPD + + A++ +A+ PS+ + G +S + +W+ G +L Sbjct: 257 LRQRPDYLKVKARTELFQARLDLARGKRLPSVDVAGEYGERAGDSL-SFKENWNIGLRLS 315 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 P+FD G ++ I++ + + L+ ++EV A ++ + +K + + A+ Sbjct: 316 YPLFDGGITRAEIKKGMVELERTGEELRAVRLSIVREVREAYLAVADAEKRLAVAREAIS 375 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 ++++ + + Y G + D++D + A + D Sbjct: 376 SAEENLRVEQLKYETGVGTTRDVIDAQTALLRATTD 411 >gi|1785478|dbj|BAA11059.1| CzcC [Alcaligenes sp.] Length = 417 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 73/337 (21%), Positives = 142/337 (42%), Gaps = 42/337 (12%) Query: 104 ISHRFIPN----------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIA 152 + R IPN K+ T + I+L G+R I ++ + A A + Sbjct: 73 MQARVIPNPELQTLVEDTRKSTRTSTAQMNIPIELGGKRSARINAAERTRELAQATLAGV 132 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 + ++ +++I S+ +ER+ +A D+ + + + + + G S + K E Sbjct: 133 RGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAAS-RASAGKISPVDETKARVEQ 191 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + E ++ S + ++ L G + +F Q NL + P L+ Sbjct: 192 ANAELELAEATASLQSARQALTALWGNASPQFTEA--------QGNLDALPSRPAPELLL 243 Query: 273 R---NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGP 328 + N P + +L A +G+ +S YP L++ S+ D N + + G Sbjct: 244 KELENSPLVAASRAELDRRQALVGVERSRQYPDLTV--SLGAKRDTE---ANRNMAVIGV 298 Query: 329 KLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE----DKKI 382 + LPIFD+ G + S IR+A+ AQ++Y+ N I N L + N+ Sbjct: 299 AIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTRNLLMASNQLSVSRASA 351 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T Q + +++ + + I + G+++ LD+LD +R Sbjct: 352 QTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 388 >gi|313202752|ref|YP_004041409.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] gi|312442068|gb|ADQ78424.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] Length = 440 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 140/305 (45%), Gaps = 12/305 (3%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 VD K + L+ +Y +E + I + L+ +++ K G+ + ++ Sbjct: 138 VDQLKQKLSGMLVGNYYSIVFVQEALKIKEEELNTLNVHLQFVQKKAATGSATNYEILTT 197 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + I +IE+ L + ++ + +++ LG L + P + I N + Sbjct: 198 KVRISTIENQKTDLLNTLQIQLSQLNSFLGKQQDTKLTVKKSL---LSPQI-IAANDSLY 253 Query: 269 ADLIRNRPDIRYQEKK--LADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNT- 322 I +R +++ +K L D+ KI A+++ P+L+ NG+ + + +N + Sbjct: 254 NFAINHRSEMKIARQKNILTDTHLKIVNAQNN--PTLNFNGTGGIKNGYFNNKYQDVGKL 311 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 ++ G L +PIFD + K N +A+S + + T I EV + ++ K Sbjct: 312 NYVVGIGLKVPIFDANRTKYNRIQAQSEIKSNLQDTELTRRAIINEVIESKSNTETALKK 371 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 V + + +E +++ SL+ N++ G + LD+LD A A+ ++ L K + + +++ L Sbjct: 372 VNQSELQLEQAEQAYSLADTNFKAGVITNLDLLDSSTAVAESKLALLKTKIEYSINFLKL 431 Query: 443 YIAIG 447 IA+G Sbjct: 432 KIALG 436 >gi|295701033|ref|YP_003608926.1| type I secretion outer membrane protein, TolC family [Burkholderia sp. CCGE1002] gi|295440246|gb|ADG19415.1| type I secretion outer membrane protein, TolC family [Burkholderia sp. CCGE1002] Length = 488 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/316 (17%), Positives = 139/316 (43%), Gaps = 26/316 (8%) Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A D ++ +++ +++ +Y D ++++S+A + + + + F G ++ ++ Sbjct: 150 ATFDDSRQDLLVRVLTAYTDTVFAEDQLSLALAQKNAFDEQYAGNQAMFKNGEGTRTDIL 209 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI--- 263 + +++ E+D+ S H + L G PA+ + + + ++FQP L P+ Sbjct: 210 ETKSKAALAEADVADARDSLDNAAHALEALTGLPASLDVAGLDRLKDDFQPVLPEPLSFD 269 Query: 264 ---NIGIP--ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL---THDN 315 ++ + A LI R + ++K+ I ++ YP + L S+ T N Sbjct: 270 HWHDVALENNAQLIAGRHSVEAAQQKMK-------IVQAGFYPRVDLVASVGQNQSTQTN 322 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE----TVLNAIKEVEN 371 + S G ++ +P++ G ++++ ++ +++ + Q+ +L+ K+ Sbjct: 323 AIGARYLTKSVGVEVTIPLYSGGLVRASTQQEQANYERAQFELQDKTDKVLLDLRKQYNQ 382 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 ++S+ + L+ AVE + + + + G + D+L + + DL+ A Sbjct: 383 CVSSMTR----IDSLKSAVESAMLQIVATRKSVQAGVRTNADVLTATQQLYTAKRDLAHA 438 Query: 432 KRQLAKSYVDLYIAIG 447 + Q + + L A G Sbjct: 439 RYQFLLAELQLKHAAG 454 >gi|289628575|ref|ZP_06461529.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867799|gb|EGH02508.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 191 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/170 (19%), Positives = 77/170 (45%), Gaps = 5/170 (2%) Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTHWSFGPKLYLPIFDKG 338 ++A I +A + YP++ L GS++ G + GP + LPIFD G Sbjct: 4 QVAAQARGIDVAHAGFYPNVDLVGSLSYMATGGGMLEFLTGSKLGYKVGPAISLPIFDGG 63 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++++ + +A ++ + + +T++ A+K + + L K +V +K+ Sbjct: 64 RLRAELGQASAAYDQAVAHYNQTLVMALKSISDQLIRRASMDKQQAFAAESVASAQKTYD 123 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +++I +++G L++L+ + + + +Y L +A+G Sbjct: 124 IALIAWQRGLTDYLNVLNARTQLFRQQQIQQQVEAARLNAYAGLVVALGG 173 >gi|254162153|ref|YP_003045261.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli B str. REL606] gi|253974054|gb|ACT39725.1| predicted outer membrane protein [Escherichia coli B str. REL606] gi|253978222|gb|ACT43892.1| predicted outer membrane protein [Escherichia coli BL21(DE3)] gi|309702452|emb|CBJ01778.1| multidrug resistance outer membrane protein [Escherichia coli ETEC H10407] gi|313848690|emb|CAQ32544.2| predicted outer membrane protein [Escherichia coli BL21(DE3)] Length = 454 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 83/436 (19%), Positives = 171/436 (39%), Gaps = 52/436 (11%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW ++D L L+ ALQ + A +RI A+ +V P Sbjct: 33 QWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQK 92 Query: 100 -SYASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQ 148 S + F N TN T L + W +D++G+ R + + L + + A+ Sbjct: 93 MSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAE 152 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + + + + Y + + ++ QI I + G TS Sbjct: 153 REQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS------ 206 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIG 266 ++ +E+DI R +++++ + L Q +S +P + Sbjct: 207 ---VEGVETDINA--SKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQ 261 Query: 267 IPADL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPG 319 +P +L + R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 262 LPDELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRH 321 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + Sbjct: 322 SAQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV--- 378 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQ 434 + + K QH ++ + +L ++ Q R++ I + A++ + + + Q Sbjct: 379 QTLAEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQ 436 Query: 435 LAKSYVDLYIAIGSGY 450 + + L A+G GY Sbjct: 437 WLDASIQLTGALGGGY 452 >gi|255692085|ref|ZP_05415760.1| outer membrane efflux protein [Bacteroides finegoldii DSM 17565] gi|260622237|gb|EEX45108.1| outer membrane efflux protein [Bacteroides finegoldii DSM 17565] Length = 465 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 58/331 (17%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI----------- 109 L + AL+QN+TI + + + ++ + +A LFPS S S + + Sbjct: 46 LQSCIDYALEQNITIRKNRVTAESTQIDVKTAKAALFPSLSFSTSQQVVNRPYQETSSRV 105 Query: 110 -------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA-KLNVISK 159 N KT+ G L++ W I G +R L++ A++D+A N I + Sbjct: 106 SGSEIISSNSKTSYNGNYGLNASWTI-YNGSKRLKTLKQERLNNQVAELDVATSENTIKE 164 Query: 160 LIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 I YI + E + + L + + G+ +K +LEA++ + Sbjct: 165 SIAQIYIQILYAAESVRVNENTLQVSIAQRDRGQELLNAGSIAKSDFAQLEAQVSTDRYQ 224 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIPADLIRN 274 + T + +TL Y N N+Y+P N+ P ++ Sbjct: 225 LVTAQ----------ATLQDYKLQLKQLLELDGENEM--NVYLPKLSDENVLAPLPAKKD 272 Query: 275 --------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFP---- 318 RP+I + + S I IAKS +P++SL+ I H D +F Sbjct: 273 VYVSALAIRPEIEASKLNVEASELGIDIAKSSYFPTISLSAGIGTNHTSGSDFTFGEQVK 332 Query: 319 -GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+N S G + +PIF+ + KS +++A+ Sbjct: 333 NGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|289674720|ref|ZP_06495610.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 155 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN---SFPGYNTH 323 +P++ + R DIR +E+ L S A IG A++ +PS+ L+ + L D+ F + Sbjct: 82 LPSERLLERFDIRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGA 141 Query: 324 WSFGPKLYLPIFD 336 W F P+L LP+FD Sbjct: 142 WLFTPQLNLPLFD 154 >gi|198276919|ref|ZP_03209450.1| hypothetical protein BACPLE_03124 [Bacteroides plebeius DSM 17135] gi|198270444|gb|EDY94714.1| hypothetical protein BACPLE_03124 [Bacteroides plebeius DSM 17135] Length = 444 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 79/379 (20%), Positives = 163/379 (43%), Gaps = 39/379 (10%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF-----------I 109 L + + A+ NLT+ Q + ++ + + + P S SH F Sbjct: 29 LTRCIDYAIAHNLTVKQQEAARDKSEVELNTAKWSRLPDLNGSASHSFNFGRSLQANNTY 88 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRR---HIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 ++ T +TG L+ + LF + +I S NL +A ++ AK ++ ++ +Y+ Sbjct: 89 QSINTQNTG-LNLSTSVPLFTGMQIPNNIALSKLNLKAATEDLNKAKEDISIEVASAYLQ 147 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E + IA Q ++L ++ + F G S+ + ++ + + + E + Sbjct: 148 VLFNEELVKIARQQVELSQEMLTQKEAYFKNGKASEAEWYEAKSRVAQDQLSLVQTENDY 207 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQE 282 R+++ ++S LL P+ + + S + QP + PA++ + +P I+ + Sbjct: 208 RLSLLDLSQLLELPSPDNFRIV---SPDIQPEQLFGT-LTPPAEIYSQALLTKPSIKAAQ 263 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----SFPGYNTHWS------FGPKLYL 332 +L + I IA+S YP L+ + ++ N P +++ G L + Sbjct: 264 YRLEGAARSIRIAQSAYYPQLNFGAGLGTSYYNVSGRENPSFHSQLKDNFSQYVGLSLSI 323 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENA-LTSINEDKKIVTKLQHA 389 PIF++ ++ +R A ++ + WQ ET KE++ A ++N + K + Q A Sbjct: 324 PIFNRLSTRNRVRTAR--IEQTTLNWQLEETKKKLYKEIQQAYYNAVNAESKYQSS-QVA 380 Query: 390 VELHKKSMSLSMINYRQGR 408 E + S L Y G+ Sbjct: 381 DEAAEASFKLMKEKYTHGK 399 >gi|85860680|ref|YP_462882.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] gi|85723771|gb|ABC78714.1| type I secretion outer membrane protein [Syntrophus aciditrophicus SB] Length = 482 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 8/226 (3%) Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY--PATEFLHYMQKQS 252 F G +++ L+K + E+ + E S + + L+G P EF + Sbjct: 224 FKAGKVAQVELLKAQVEVAKARENFLLAENSLKTTYELLRMLMGMEDPGQEFRIAGEPGY 283 Query: 253 NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 +L + A+ ++ RP+ K + ++ IAK+ P + L G T Sbjct: 284 RKIDYSLEQAL-----AEALKRRPEYLSVLKTMQAGEERVEIAKARRLPYVYLAGQYVET 338 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 S +W+ +L LP+FD G I + I R ++ ++ + L +EV+ Sbjct: 339 TGTSVD-LKENWNAALRLSLPLFDGGLITAEIDREKAELEKVKQNERFLRLEINQEVKET 397 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 S+ +K + A+E K+++ + + YR+G + +++D + Sbjct: 398 FLSLENAEKRMEVASKAMESAKENLRVEELKYRKGASTTTNVVDAQ 443 Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust. Identities = 38/192 (19%), Positives = 85/192 (44%), Gaps = 21/192 (10%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--------------FPG 319 N P I+ E +A A + AKS+ +P + L G A H + FP Sbjct: 79 NSPTIKQAESNVAVEQANLKAAKSERFPKIELGGGGARYHYPTPVTPISGSPLAGVPFPE 138 Query: 320 YN-THWSFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTS 375 ++ T + G L+LP++ G++ N+ +E ++A + + ++ ++ + V + Sbjct: 139 FSETIYDVGAFLHLPLYKGGRLVRNVELSELRGAAAADLLVAKRQDLIYNLTSVYYKILQ 198 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 +N + +E H++ + ++ G+ + +++L + AK + +A+ L Sbjct: 199 LNSFMQSTEAQVRGLETHQRQVE---DFFKAGKVAQVELLKAQVEVAKARENFLLAENSL 255 Query: 436 AKSYVDLYIAIG 447 +Y L + +G Sbjct: 256 KTTYELLRMLMG 267 >gi|167588774|ref|ZP_02381162.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 209 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 13/170 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR---- 107 W F D +L + AL N + A R+ A+ RAD PS A++ + Sbjct: 18 WRAYFTDPALQAWIDAALANNRDLRVAAGRVEEARALYGVQRADRLPSLDANLGYERTRV 77 Query: 108 FIPNLKTNSTGQLD------SDWKIDLFGQRRHI-ESSLAN-LDSAYAQVDIAKLNVISK 159 + P ++ ++ L S +++DLFG+ + + +++LA +A AQ + ++ VI++ Sbjct: 78 YDPVVRQSAVSGLYRAGVGISAYELDLFGRVKSLSDAALAEYFATAEAQRTV-RIGVIAE 136 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 + +Y+ R E++++A + LD ++ L+ ++ G + + L E Sbjct: 137 VANAYVAERSLHEQLALAQRTLDARERIASLTQRRYAAGTSDAIELRSAE 186 >gi|206589615|emb|CAQ36576.1| hypothetical outer membrane chanel lipoprotein (partial sequence n terminus) [Ralstonia solanacearum MolK2] Length = 313 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 20 VGPEYTKPHMPLL--PTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQ 77 VGP+Y P + + P + + + +WWE F+DT+L +L++ A + T+ Q Sbjct: 18 VGPDYRTPQLAGVEAPAGWHATLPHHGSRMMLARWWEQFHDTALTQLIEQAGADSPTLAQ 77 Query: 78 ATERINAAKENILSVRADLFP 98 A R+ A+ ++ S RA L P Sbjct: 78 AVGRVREARASVSSSRAALLP 98 >gi|167590518|ref|ZP_02382906.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 167 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 19/100 (19%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQ-FSIGNSKNLINIDTL----------------K 51 ++ + LLAGC VGP+++ P P PTQ ++ G + + Sbjct: 22 TIAVSLLAGCAVGPDFSPPAAP--PTQRYTRGEPPATTAAASGAAGNAQTFSHAAHAPPR 79 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS 91 WW F +LN+LV AL+ + T+ +A R++ A+++ ++ Sbjct: 80 WWTQFGSAALNRLVDDALRHSPTLDEARARLDEARQSYVA 119 >gi|167570188|ref|ZP_02363062.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia oklahomensis C6786] Length = 257 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDAWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQIDGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ + + E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKNNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + ++ EL+H + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHTTYERQRELAELAHKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLG 238 I + E++ ++ H ++ L G Sbjct: 216 RQIDSYEEAIQLGRHQLAALAG 237 >gi|116253410|ref|YP_769248.1| hypothetical protein RL3669 [Rhizobium leguminosarum bv. viciae 3841] gi|115258058|emb|CAK09158.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 129 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 44/64 (68%) Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L+ V+ +++++LS+ +Y+ G+ SLLD+LD +R+ A + L+ A +Q+AK YV + A Sbjct: 27 LRAQVKTTQETLALSIGSYKDGQSSLLDVLDAQRSVATSQAKLAQAVQQMAKDYVTVNAA 86 Query: 446 IGSG 449 IGS Sbjct: 87 IGSA 90 >gi|95469|pir||C33830 cation efflux system membrane protein czcC - Alcaligenes eutrophus Length = 345 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 77/339 (22%), Positives = 144/339 (42%), Gaps = 46/339 (13%) Query: 104 ISHRFIPN--LKT----------NSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVD 150 + R IPN LKT ST Q++ I+L G+R I ++ + A A + Sbjct: 1 MQARVIPNPELKTLVEDTRKSTRTSTAQMN--IPIELGGKRSARINAAERTRELAQATLA 58 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 + ++ +++I S+ +ER+ +A D+ + + + + G S + K Sbjct: 59 GVRGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAAS-RVAAGKISPVDETKARV 117 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 E + E ++ S + ++ L G + +F Q NL + P Sbjct: 118 EQANAELELAEATASLQSARQALTALWGNASPQFAEA--------QGNLDALPSRPAPEL 169 Query: 271 L---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-F 326 L + N P + +L A +G+ +S YP L++ S+ D N + + Sbjct: 170 LQKELENSPLVAASRAELDRRQALVGVERSRQYPDLTV--SLGAKRDTE---ANRNMAVI 224 Query: 327 GPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE----DK 380 G + LPIFD+ G + S IR+A+ AQ++Y+ N I N L + N+ Sbjct: 225 GVAIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTRNLLMASNQLSVSRA 277 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T Q + +++ + + I + G+++ LD+LD +R Sbjct: 278 SAQTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 316 >gi|115380201|ref|ZP_01467226.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|115362784|gb|EAU61994.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 466 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 24/265 (9%) Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ F GA ++L +V++ +++ + + + ++ R + LG P + Sbjct: 209 LTQRSFELGAGTQLDVVRVRQDVEVARASLISGDEQLRRAREALGLTLGLPEAVGV---- 264 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLN 306 K S Q + P + RPD+ R Q + DS + A + P+L L Sbjct: 265 KTSFQLQGLVEQTRAECAPLKALSERPDLAAARSQVEAARDSKRQ---ASAGYLPTLGLT 321 Query: 307 GSI-ALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 ++ A T D PG+ T WS L +PI++ G + +R E +A E + ET+L Sbjct: 322 SNLLAYTTD---PGFGTVPTWSISAILSVPIWEGGLREGLVR--ERAALEAQAS--ETLL 374 Query: 364 NAIKEVE----NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +E E A S+ + +V A EL +++ L+ + GR S L+++ Sbjct: 375 RTGREAEVEVARARRSVEVSETLVKTAASAQELAERTDQLTRRAFEVGRGSSLELVQSGA 434 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYI 444 A + ++ L++ + +L ++ + ++ Sbjct: 435 ALRQAQLALALREFELVQARLSAFL 459 >gi|145219365|ref|YP_001130074.1| outer membrane efflux protein [Prosthecochloris vibrioformis DSM 265] gi|145205529|gb|ABP36572.1| outer membrane efflux protein [Chlorobium phaeovibrioides DSM 265] Length = 426 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 4/179 (2%) Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E +++A I +N+ L L++ G SL K EA++ E ++ + ++ Sbjct: 146 QEYVTLAADIQGRRLRNVRLIGLRYRAGREHIGSLRKAEADLADAEFEVARASRGLGVSR 205 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA 290 +ST +G ++ +P P + + A+ P +R E ++ S Sbjct: 206 SALSTAMGRGLGSTHLKVRGSFTAVEPAEQRPDFMRLAAE----SPVVRSLEARMRASGF 261 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 + A+S P LSL+ SI + + + + W G L +PI++ G ++ + +A + Sbjct: 262 DLRAARSAFSPELSLSSSIGRSAADDWNPDESEWRVGLDLAVPIYEGGSGRAGVAKARA 320 Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 4/161 (2%) Query: 294 IAKSDLYPSLSLNGSI-ALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 IA S L PSLS+ G L + S G +S+ ++D GK S + RA Sbjct: 58 IAGSPLLPSLSVQGGARELGYTGSRAGSAGAQYSYALAGAQLLYDGGK-SSGLARAAGEG 116 Query: 352 QEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + + +E V ++ + +A TS+ + ++ VT +++ L + YR GR Sbjct: 117 VKGAESSREAVSADVRFALRSAFTSLLKAQEYVTLAADIQGRRLRNVRLIGLRYRAGREH 176 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + E A E +++ A R L S L A+G G Sbjct: 177 IGSLRKAEADLADAEFEVARASRGLGVSRSALSTAMGRGLG 217 >gi|291614060|ref|YP_003524217.1| type I secretion outer membrane protein, TolC family [Sideroxydans lithotrophicus ES-1] gi|291584172|gb|ADE11830.1| type I secretion outer membrane protein, TolC family [Sideroxydans lithotrophicus ES-1] Length = 453 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 45/329 (13%) Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILD-------LYKKNIEL 190 S A +D+A A+ A+ ++I ++ +Y DA +E ++ A L + K+ EL Sbjct: 124 SEAQVDAAQAEFSQAEQDMILRVAQAYFDALVAQETVATAEAQLQAMQAQEAVAKRGFEL 183 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + T ++ + A++ + ++D+ T + I L G P Sbjct: 184 GTVSITDSDEARSKAEQARAQLIAAQNDLET-------KLAEIEKLTGKPVAML------ 230 Query: 251 QSNNFQPNLYIPINIGIPADLIR-------NRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 + +P + P PAD+ + N P +R Q L + + AK++ + +L Sbjct: 231 --SGLKPTVVAPKPE--PADVSQWVEQAKDNNPTVRAQFASLRAAGYTVTKAKAENFWTL 286 Query: 304 SLNGSIALTHDN---SFPG-YNTHWS---FGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 GS + + + P Y T G + +PIF G S++R A ++ + Sbjct: 287 DFVGSYGANYSSGNLTIPTPYETRVKSSVAGIQFTMPIFAGGLNSSHMREAVANQGKLSA 346 Query: 357 TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 +E A E + A I LQ AVE + S+ + YR G D+L+ Sbjct: 347 QLEEARRKAGAEAKQAYMGIVNGVAQTEALQSAVESGESSVKGNQAGYRLGLRINSDVLN 406 Query: 417 IERATAKVEVDLSIAKRQLAKSYVDLYIA 445 ++ L +KR LAK+ D A Sbjct: 407 AQQ-------QLFASKRDLAKARYDTLFA 428 >gi|82776660|ref|YP_403009.1| hypothetical protein SDY_1373 [Shigella dysenteriae Sd197] gi|309789027|ref|ZP_07683622.1| multidrug efflux outer membrane EefC domain protein [Shigella dysenteriae 1617] gi|81240808|gb|ABB61518.1| hypothetical protein SDY_1373 [Shigella dysenteriae Sd197] gi|308923298|gb|EFP68810.1| multidrug efflux outer membrane EefC domain protein [Shigella dysenteriae 1617] Length = 165 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 12/134 (8%) Query: 10 LFIVLL-AGC-TVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKI 67 +F+VLL AGC ++ P Y+ P P+ T I+ D W + +D L ++V I Sbjct: 7 IFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHD---WQQVIHDPRLQQVVTI 63 Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASIS---HRFIPNLKTNSTGQLD--- 121 AL N + +A +++A+ A LFP+ A++S R + N T +T + D Sbjct: 64 ALNSNRDVQKAIADMDSARALYGQTNASLFPTVNAALSSTRSRSLAN-GTETTAEADGTV 122 Query: 122 SDWKIDLFGQRRHI 135 S + +DLFG+ + + Sbjct: 123 SSFTLDLFGRNQSL 136 >gi|189500548|ref|YP_001960018.1| outer membrane efflux protein [Chlorobium phaeobacteroides BS1] gi|189495989|gb|ACE04537.1| outer membrane efflux protein [Chlorobium phaeobacteroides BS1] Length = 467 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 6/156 (3%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGY-NTHW-- 324 A+ + RP++R E ++ + A+++ YP+++ G + A T N +T W Sbjct: 270 AEALSARPEVRQLELQIEAEAQNVNAAQAERYPAINAVGQLQAQTQFNDDVALKDTDWPV 329 Query: 325 --SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 S G ++ LPIF +I S + +A+ + ++ + EVE L+S+ E ++ Sbjct: 330 TSSVGLQVSLPIFTGFRISSQVEQAKLGRLKTMTRLEDLKADIRAEVEVKLSSLQESQQR 389 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + + ++S ++++ +R+G S L++ D E Sbjct: 390 IEVQSRTIRTAERSYEITLLRFREGIGSQLELADAE 425 >gi|148530043|gb|ABQ82229.1| arabinose efflux permease [Gluconacetobacter diazotrophicus PAl 5] Length = 75 Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 19/82 (23%) Query: 10 LFIVLLAGCTVGPEYTKPH---------MPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 L ++++AGCTVGP+Y PH P +P+Q ++ +WW F+D Sbjct: 4 LALIVIAGCTVGPDYVAPHAEAPPQWLGQPGVPSQ----------SVPDERWWAGFHDPQ 53 Query: 61 LNKLVKIALQQNLTILQATERI 82 L++L+ AL +N + A +R+ Sbjct: 54 LSRLIHEALIRNNDLAAAEKRV 75 >gi|78224321|ref|YP_386068.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] gi|78195576|gb|ABB33343.1| Outer membrane efflux protein [Geobacter metallireducens GS-15] Length = 446 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 5/160 (3%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPGYNTHWSFGPKL 330 + NR D++ EK + + A +G+A+S +P+L S+ + D F N WS G L Sbjct: 262 VANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQMNDRDVPFGRDNDGWSAGVNL 321 Query: 331 YLPIFDK-GKIKSNIR-RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +FD G++ + RAE A QY+ ++ +V ++ E K + +H Sbjct: 322 RWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDL--QVRESILRRAEAGKRLEVARH 379 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 A+ ++ L + G +++++LD + A ++ L Sbjct: 380 ALLAAEEGSRLVNKRFANGLATMVELLDAQSALSRARTGL 419 >gi|305666349|ref|YP_003862636.1| putative outer membrane protein [Maribacter sp. HTCC2170] gi|88708341|gb|EAR00578.1| putative outer membrane protein [Maribacter sp. HTCC2170] Length = 450 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 23/277 (8%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N + +L Y + E ++ Q L++ + + S F G +KL ++ + +I + Sbjct: 148 NTMLQLFSVYFEVARLTENENVLKQALEISRDRFKRSEYAFEYGQNTKLDILNAQVDITN 207 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ + +++ LL +E Y F P L + I + N Sbjct: 208 DSINVLNARQRLVNTKRDLNVLLNQNLSEL--YSVDTLIAFVPMLQLEEFI---EQAMLN 262 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTH-WSFG- 327 + +K L + I + KS P + LNGS + S FPG NT W+FG Sbjct: 263 NVAMLQTDKTLNINAYDIKVQKSGYLPKVGLNGSYGWNLNQSAASAFFPGTNTDTWNFGL 322 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI---- 382 L +FD G +R A+ + + Q + ++ L ++++NAL KI Sbjct: 323 GASLTWNLFDGGGTNVRVRNAKIAFENQELLKKQIELEVNRDIQNALAIYENRLKIFHIQ 382 Query: 383 ---VTKLQHAVELHKKSMSLSMIN---YRQGRYSLLD 413 V Q+ E K+ L I +RQ + +LL+ Sbjct: 383 EQNVITNQNNFERSKEQFQLGRITSIAFRQAQINLLN 419 >gi|331663635|ref|ZP_08364545.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA143] gi|331059434|gb|EGI31411.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli TA143] Length = 454 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 82/438 (18%), Positives = 169/438 (38%), Gaps = 56/438 (12%) Query: 51 KWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------- 99 +WW ++D L L+ ALQ + A +RI A+ +V P Sbjct: 33 QWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQK 92 Query: 100 -SYASISHRFIPN---------LKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQ 148 S + F N TN T L + W +D++G+ R + + L + + A+ Sbjct: 93 MSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAE 152 Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + + + + Y + + ++ QI I + G TS Sbjct: 153 REQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS------ 206 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN--------LY 260 ++ +E+DI R +++++ + Q+ + N Sbjct: 207 ---VEGVETDINA--SKTRQQLNDVAGKMKIIEARLSALTNHQTKALKLNPVALPKVASQ 261 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 +P +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 262 LPDELGY--SLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLF 319 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + Sbjct: 320 RHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV- 378 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAK 432 + + K QH ++ + +L ++ Q R++ I + A++ + + + Sbjct: 379 --QTLAEKNQHQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQ 434 Query: 433 RQLAKSYVDLYIAIGSGY 450 Q + + L A+G GY Sbjct: 435 GQWLDASIQLTGALGGGY 452 >gi|332087813|gb|EGI92939.1| outer membrane efflux family protein [Shigella boydii 3594-74] Length = 182 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 9/169 (5%) Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 S+ ++ A++ YPS + L D F + ++F P L LP+FD G++ +N+ Sbjct: 8 SLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANL 67 Query: 345 RRAESSAQEQYITWQETVLNAIKEVE---NALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +++ + ++VLNA+++V L ++N+++++ + A +++ + Sbjct: 68 EGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAA- 126 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 Y++G S L + E+ L + + + L ++G GY Sbjct: 127 --YQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIHSIQLMKSLGGGY 173 >gi|258591721|emb|CBE68022.1| Outer membrane efflux protein precursor [NC10 bacterium 'Dutch sediment'] Length = 426 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 48/247 (19%), Positives = 117/247 (47%), Gaps = 10/247 (4%) Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I + +L K+ ++++ K++ G + ++K + E+ + + LE+S + + Sbjct: 151 LEIVEENRELLKQFVKIAETKYSVGKGVQQDVLKAQVELSKLLDEQIRLEQSRQAAGAKL 210 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + +L P+ L + S + + + A + NRP ++ ++++ S A Sbjct: 211 NAILNRPSHTPLGRTEDVSMAEETLTELA---KLQAKALENRPLLKGLQEEIERSKAANA 267 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES---S 350 +A+ +P L+++ A D++ + +S G + +PI+ + K + + S Sbjct: 268 LARKRYFPDLTMSLGYAFREDSAIVRRSDFFSAGVSVNIPIYFRTKQDRQVAETSALINS 327 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA-VELHKKSMSLSMINYRQGRY 409 A+EQY + V + +KE+ +T I + +K++ L+ + + S+ ++ Y+ G+ Sbjct: 328 AREQYQAARNEVASMVKEL---VTDIEKGRKLIDLLETGLIPQARLSLDSAVSGYQVGKV 384 Query: 410 SLLDILD 416 L +LD Sbjct: 385 DFLTLLD 391 >gi|170703530|ref|ZP_02894287.1| outer membrane efflux protein [Burkholderia ambifaria IOP40-10] gi|170131565|gb|EDT00136.1| outer membrane efflux protein [Burkholderia ambifaria IOP40-10] Length = 200 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 8/133 (6%) Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALT---SIN 377 N W+ GP L LPIF+ G++++ + A + + + +TV+ A+K++ + + S++ Sbjct: 13 NGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTVVGALKDIADQVVRIRSLD 72 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-EVDLSIAKRQLA 436 KK + +V + +S LS +R+G +++L ++ + E I +LA Sbjct: 73 TQKKDAAR---SVAANDRSYQLSREGFRRGLTDYVNVLIAQQQLLRAQETAARIDAERLA 129 Query: 437 KSYVDLYIAIGSG 449 ++ L A+G G Sbjct: 130 -AHAQLMAALGGG 141 >gi|254293693|ref|YP_003059716.1| type I secretion outer membrane protein, TolC family [Hirschia baltica ATCC 49814] gi|254042224|gb|ACT59019.1| type I secretion outer membrane protein, TolC family [Hirschia baltica ATCC 49814] Length = 471 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 59/302 (19%), Positives = 130/302 (43%), Gaps = 12/302 (3%) Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 I + A + A +Q+ + ++I ++ +Y+D + + I + + + +E + + Sbjct: 152 IGEAAAGVTQAESQLFAFEQDMILNVVTNYMDVLASEAEVDIRKNNVSVLVRQVEAASDR 211 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 F G ++ + + +A ++ + T + + N L+G T+ ++ N Sbjct: 212 FEVGEVTRTDVAQAQARYSGAKAQLSTAQANLVANRAVFQELVGRWPTQL------EAVN 265 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH- 313 F P+ ++ I A + N PD+ + + S ++ AK P +S+ G+ L+ Sbjct: 266 FTPDYPEGLDDAINAAMEYN-PDLVASKASVKASEQRLRSAKGQNRPDISIVGAAGLSQT 324 Query: 314 --DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D++F N + S +L LP++ G+I S IR + + + + + + +V Sbjct: 325 YQDDTF--NNENASVVAQLTLPLYTGGRISSQIRASALERDQLRLQHRAAERSVLVQVTR 382 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A S ++ + Q VE + + + G + LD+LD E+ ++ L A Sbjct: 383 AWHSALASQRTIEASQQQVEAAQIAFDGAEQELAVGLRTTLDLLDQEQELLDAQLALVQA 442 Query: 432 KR 433 R Sbjct: 443 NR 444 >gi|300771087|ref|ZP_07080963.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761757|gb|EFK58577.1| outer membrane efflux protein [Sphingobacterium spiritivorum ATCC 33861] Length = 452 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 15/313 (4%) Query: 128 LFGQRRHIESSLANLDSAYAQV--DIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 +F Q A+ A+ QV ++ + +I ++ SY D K ++ L + Sbjct: 122 IFNQSVFTGLKAASTTRAFYQVNHEMTEEQLIERVANSYYDVYQAKMQLETIESNLKSTR 181 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 K ++ ++ G K+ L + + + ++ES ++ + + ++G + Sbjct: 182 KTRDVIFGSYSNGLAKKIDLDRTDVAVNNLESSKLQKMNEIQLKENALKFVIGMDVNK-- 239 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 +Q + F +L I + + NR +I+ + ++ ++ YP+LSL Sbjct: 240 -EIQMPKSTFNIDLKIA---NLDTAQLDNRTEIKLLATQRQLNIFNKKSIEAQYYPTLSL 295 Query: 306 NGSIALT-HDNSFPGYNTH--W----SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 S FP N + W S G L PIF+ +S +R+A+ + + Sbjct: 296 QASYGYAGFGQKFPLVNNNGVWANFASIGLNLSFPIFNGFATRSKVRQAQIDIDKLDVDI 355 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + L + E NA + + Q +EL K+ +S NY+ G +L D+LD E Sbjct: 356 ADRKLGLMTEANNAQKQLKNSLLNINVQQANMELAKEVLSNVENNYKNGLATLTDLLDAE 415 Query: 419 RATAKVEVDLSIA 431 +A A+ + + S A Sbjct: 416 KAYAEAQNNHSTA 428 >gi|323975282|gb|EGB70385.1| NodT family protein RND efflux system [Escherichia coli TW10509] Length = 358 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/330 (19%), Positives = 135/330 (40%), Gaps = 44/330 (13%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIAL-- 69 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 20 LISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSG 79 Query: 70 --------------QQNLTILQATERINAAKENILS---VRADLFPSSYASISHRFIPNL 112 Q +L A ++ A +L+ V A+ F S YA + P L Sbjct: 80 SHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PAL 135 Query: 113 K------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 136 GMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYY 195 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + + + + Q + + K G +++ A+I +++ I ++ Sbjct: 196 SMQASYQMLDLLEQTRSVIDYAVRAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQ 255 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA----DLIRNRPDIRYQ 281 ++ L+G A++ M + P + GIPA +L+ RPD++ Sbjct: 256 ITETRESLRALIGAGASD----MPEIKAVALPQ----VQTGIPATLSYELLARRPDLQAM 307 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 + S+ ++ A++ YPS + L Sbjct: 308 RWYVQASLDQVDSARALFYPSFDIKAFFGL 337 >gi|86157902|ref|YP_464687.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774413|gb|ABC81250.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 454 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 19/243 (7%) Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + ++ G +++ L++ + + E D+ ++ LLG + Sbjct: 199 AQVQVQAGTAARIVLLRAQIDRARAEEDLVRARNGLAGAKSTLAALLG----------RG 248 Query: 251 QSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 ++ +F L P +PADL +R RP++R + + A + + P+L Sbjct: 249 EATDF--ALSAPPAPELPADLAPLEDEAVRLRPELRAAAAGVEAATASRRVETARYLPTL 306 Query: 304 SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 G + F G W+ G L +FD G ++ R A + E L Sbjct: 307 GAFGQARWSSVAGFTGKEESWAAGLSLQWELFDGGAREAGRREATARLVEAEAARASLAL 366 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A EV A + + K + V L +++ L + +R G+ + L+ D A A Sbjct: 367 QARDEVRRARLDLASARANRAKAEEQVALARENQRLVEVAFRAGQATSLEATDANVALAT 426 Query: 424 VEV 426 E+ Sbjct: 427 AEL 429 >gi|117924286|ref|YP_864903.1| outer membrane efflux protein [Magnetococcus sp. MC-1] gi|117608042|gb|ABK43497.1| outer membrane efflux protein [Magnetococcus sp. MC-1] Length = 375 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 9/172 (5%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGI--AKSDLYPSLSLNGSIAL---THDNSFPGYN 321 I L+RN P R + +A A++G A+ LYP+LSLN S ++ T ++ G + Sbjct: 174 IQKALVRN-PMFRVLD--VAAEAAQLGADKARGGLYPTLSLNASHSVYNNTASATWLGAD 230 Query: 322 THWS-FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 T+ G L +P+F G+ ++ +R A S E + ++ ++V ++ + Sbjct: 231 TNTQVLGVTLSVPLFQGGRPEAQMREALSQKDEAQLKREDLYRKITRQVGDSYRGVLTAI 290 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 V L+ A + + ++ + + G ++LDIL+ ERA + L+ A+ Sbjct: 291 ARVNALKQAEKSAQTALKTTQAGFTAGVRTMLDILNAERALRDTQRHLNAAR 342 >gi|296135312|ref|YP_003642554.1| outer membrane efflux protein [Thiomonas intermedia K12] gi|295795434|gb|ADG30224.1| outer membrane efflux protein [Thiomonas intermedia K12] Length = 490 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/374 (20%), Positives = 156/374 (41%), Gaps = 42/374 (11%) Query: 88 NILSVRADL--FPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSA 145 N+LSV + +P S + + R L + G+L +++ + + L +A Sbjct: 115 NVLSVAPNSLNYPGSVNNFNTRIQAELPIYTGGKLQG-----------YLQQARSMLMAA 163 Query: 146 YAQVDIAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 A A+ +I + +Y AR FK +A + L+ + ++ F QG K Sbjct: 164 QAGDQAARQQIIYHALQAYDGVYTARAFK---GVAGKALEAAQSQVKTVDSLFKQGVVIK 220 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL---LGYPATEFLHYMQKQSNNFQPNL 259 L L A+++ + + +++ M + L LG P + + P + Sbjct: 221 SDL--LSAQVRQEDVKLQQ-DQAADMEAQAMDALHVVLGVPLNQPI--------TLGPEV 269 Query: 260 YIPINIGIP----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--TH 313 + + G P + P I+ + ++A + KI +A++D YP + G++A T+ Sbjct: 270 MVTMPEGDPNAWVGQAMERNPKIQALQHQIAAAGGKIEVARADRYPQV---GAMARFDTN 326 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 D + + ++ G +L IFD G ++ + +A + E Q +V+++ Sbjct: 327 DPNLGFESRSYTVGAQLNWTIFDGGVTRNAVDQAVAQRMELQAKLQSEQNQLGMQVQDSY 386 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 E V + AV+ +++ + Y G +L+++ + K DL +AK+ Sbjct: 387 RKAVEAANQVKTRELAVKQSEEAERIVSKRYADGVGTLVEVQGAQAQLDKARADLIMAKQ 446 Query: 434 QLAKSYVDLYIAIG 447 Q+ L +AIG Sbjct: 447 QVNLQRAALRLAIG 460 >gi|167830122|ref|ZP_02461593.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Burkholderia pseudomallei 9] Length = 201 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 11/169 (6%) Query: 290 AKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 A I ++ YP + +L G ALT + F S GP L LPIFD+ ++K+ + Sbjct: 6 AAIDGTRASFYPDVNLAALGGLFALTPASLFRHDALGGSIGPALSLPIFDRSRLKAKLGG 65 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 ++A + +TV A+ EV LTS+ ++ Q A+ ++ ++L+ +R+ Sbjct: 66 DVANADMALALYNQTVDAALGEVARQLTSLATLDTLLKAQQQALRAAQRMVALAQDRHRR 125 Query: 407 GRYSLLDILDIERATAKVE----VDLSIAKRQLAKSYVDLYIAIGSGYN 451 G DI D+ + T E V+L +R L V L A+G G++ Sbjct: 126 GMGMRKDI-DVAQLTLLDERAHVVELQARRRTL---RVGLIGALGGGFD 170 >gi|255019627|ref|ZP_05291707.1| Type I secretion outer membrane protein, TolC precursor [Acidithiobacillus caldus ATCC 51756] gi|254970930|gb|EET28412.1| Type I secretion outer membrane protein, TolC precursor [Acidithiobacillus caldus ATCC 51756] Length = 460 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKL 330 IR++P + E +L + + + +P + L G H N FPG+N + + L Sbjct: 245 IRDQPLMHEAEAQLRTAQEAVQYQQRARWPKVDLQGIAQHVHGNPFPGFNENQAGVSLNL 304 Query: 331 YLPIFDKGKIKSNIRRAE--SSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQ 387 +PI+ G I S +++A+ S AQ ++ +V + ++ + + A ++ + + + Sbjct: 305 SMPIYQGGSISSGVQKAQALSVAQVDHVG---SVRDRVRLDTQTAFLNLKDSVAQLASAK 361 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 AVE K S+ + Y G S++D+L + E D ++A + V L A G Sbjct: 362 AAVESAKISLEGTRKGYEVGTRSIIDLLQTATDYIRAEQDYNVALYNQVLARVQLKAAAG 421 >gi|237726490|ref|ZP_04556971.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229435016|gb|EEO45093.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 471 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 154/343 (44%), Gaps = 38/343 (11%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ + VI K +Y + A+ K Sbjct: 150 GKIRAAYKMSLLGKE------MAQMNET-----LTATEVILKTDQAYALVVKAKEMKTVA 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L +KN+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 199 DTYHAVLAELQKNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 255 Query: 235 TLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P TE L S +F P + + + + + D+ R RP+ +K++A + ++ Sbjct: 256 HLIGKPLTTEILI-----SGDF-PEIELEMELQV-LDITR-RPEYGILDKQVAIARQQVK 307 Query: 294 IAKSDLYPSLSLNGSIALTH-----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + +S+L P + + GS H + +F N +S + +P+F G+ + +R A+ Sbjct: 308 LNRSELLPKVGIKGSYDYVHGLELNEKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAK 366 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + Q + E+ A +++E K ++ +++ +S Y G Sbjct: 367 ARLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLRQAEENRRVSKSQYEVGL 426 Query: 409 YSLLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L D L+ + + + +VD A+ QL +YV A G+ Sbjct: 427 ETLSDHLEAQALWQQAYETQVD---ARFQLYLNYVAYLKAAGT 466 >gi|310821442|ref|YP_003953800.1| efflux transporter, hae1 family, outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|309394514|gb|ADO71973.1| Efflux transporter, HAE1 family, outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 425 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 24/265 (9%) Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 L+ F GA ++L +V++ +++ + + + ++ R + LG P E + Sbjct: 168 LTQRSFELGAGTQLDVVRVRQDVEVARASLISGDEQLRRAREALGLTLGLP--EAVGV-- 223 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLN 306 K S Q + P + RPD+ R Q + DS + A + P+L L Sbjct: 224 KTSFQLQGLVEQTRAECAPLKALSERPDLAAARSQVEAARDSKRQ---ASAGYLPTLGLT 280 Query: 307 GSI-ALTHDNSFPGYNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 ++ A T D PG+ T WS L +PI++ G + +R E +A E + ET+L Sbjct: 281 SNLLAYTTD---PGFGTVPTWSISAILSVPIWEGGLREGLVR--ERAALEAQAS--ETLL 333 Query: 364 NAIKEVE----NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +E E A S+ + +V A EL +++ L+ + GR S L+++ Sbjct: 334 RTGREAEVEVARARRSVEVSETLVKTAASAQELAERTDQLTRRAFEVGRGSSLELVQSGA 393 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYI 444 A + ++ L++ + +L ++ + ++ Sbjct: 394 ALRQAQLALALREFELVQARLSAFL 418 >gi|254446558|ref|ZP_05060034.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198260866|gb|EDY85174.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 442 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/232 (19%), Positives = 115/232 (49%), Gaps = 17/232 (7%) Query: 204 SLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI 263 +L++L+ EI + + +L++ +S LL P + L + + Q +P L P Sbjct: 185 ALLRLKVEIGKVNDRLQSLQQKRVTQSAQLSELLALPESTLLPWPEWQ----KPGLVSPR 240 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 + + N P ++ E+K+A + A+I +AK + P ++ + D P + Sbjct: 241 ATSLLESIESNNPQLQMLERKIASAAARIELAKLESRPDFTVGLNYVQIGDLDTPAMSPD 300 Query: 324 -----WSFGPKLYLPIFDKG--KIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTS 375 W + +P++ K ++ ++ + Q +Y + LNA+K ++ ++L+S Sbjct: 301 SGKDAWGVTFGVNIPLWSKKNRAAQAEAASSQQAIQSEY----QNRLNALKADLASSLSS 356 Query: 376 INE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 + + ++++ + + L ++++ S ++Y+ GR +L+++D ER+ ++++ Sbjct: 357 LTDANRRLELYGEELLGLAEQAVENSRMSYQGGRTGILEVIDSERSLLELQL 408 >gi|225850356|ref|YP_002730590.1| outer membrane efflux protein [Persephonella marina EX-H1] gi|225645687|gb|ACO03873.1| outer membrane efflux protein [Persephonella marina EX-H1] Length = 427 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 103/445 (23%), Positives = 180/445 (40%), Gaps = 95/445 (21%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK-TN--- 115 ++++ V IALQ NL I Q I+ +K + + +P + + S F+ + TN Sbjct: 18 TMDEAVNIALQNNLRIKQKEMDIHISKLQLKEDKNLWYPQFFINYSFTFLKDTPYTNLPP 77 Query: 116 --------STGQLDSDW---KIDL-------FGQRRHIESSLANLDSAYAQVDIAKLNVI 157 S Q+ D+ +I F + I+ S A ++ D ++N + Sbjct: 78 SALFPVPFSFKQMSRDFYNFEIGFNYPIFTGFSRTGKIKISKAEINFNQKIYDEERINTV 137 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIEL--SHLK-----FTQGATSKLSLVKLEA 210 +++ +YID + +A +LD+Y+K SHL+ + +G +K+ +++ + Sbjct: 138 AEVKKAYID-------VLMAEAVLDIYRKQYSAVKSHLERAEEFYKEGLIAKVEVLQSKV 190 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + IE I E + ++ LL QK +F P+ I IP Sbjct: 191 RLSQIEMKIKKAEGDLNVAKSRLNVLLD----------QKMDKDFDVE---PVYIEIPDS 237 Query: 271 L---------IRNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP 318 L + NR I R +E +L D + KI KSD YP + G + + Sbjct: 238 LDLNGLIRSALENRNVIKAMRIKESEL-DYLEKI--EKSDFYPKVFAQGKYFYSDQYPYL 294 Query: 319 GYNTHWSFGPKLYL------PIFDKGKIKSN-------IRRAESSAQEQYITWQETVLNA 365 + SF L L P + K+K IR ++S + Q E A Sbjct: 295 DPKGNLSFTVALNLQFQGIKPYYASLKVKEEKRKLKLKIRDLQNSIKLQVKAAYENFSVA 354 Query: 366 IKEVENALTSINEDKKI--VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 +K ++ A +S+ E K+ + K Q+ +L S D+LD E Sbjct: 355 LKNLKVAQSSLKEAKEYYRMVKEQYINQLA----------------STTDVLDAESYLTS 398 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 ++I++ QL K+Y+DL A+G Sbjct: 399 ARKGVTISRYQLLKAYIDLEKAVGG 423 >gi|288927282|ref|ZP_06421129.1| outer membrane efflux protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330116|gb|EFC68700.1| outer membrane efflux protein [Prevotella sp. oral taxon 317 str. F0108] Length = 460 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 68/337 (20%), Positives = 133/337 (39%), Gaps = 43/337 (12%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKT- 114 +L + A+Q N+++ + + +A+E +L +A+L PS AS S +R P Sbjct: 40 TLKDCISHAMQHNISLQKQRIAVKSAEEEMLHSKAELLPSVSASTSQNVNYRPWPETGAA 99 Query: 115 ----------------NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNV 156 N T +++ W + G R +L L + A+ + ++ + Sbjct: 100 RVANGSVQSSVDKVFYNGTYVINAQWTL-WNGNRNRNTIALNQLQMSKAEAEAMVSAATI 158 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ Y+ + E I+++ Q L+ +N E G SK L +L A+ E Sbjct: 159 QERIAQLYVQILYSAEAINVSKQALETSARNEERGKEMLNVGKMSKADLAQLTAQRAQEE 218 Query: 217 SDIPTLEKS---FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 ++ + + + F+ + + + E QP IP + I Sbjct: 219 YNVLSAQSTLADFKRQLKQLLQITDSAPFEVAVPATTGEMALQP---IPSVSEVYTQAIS 275 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW--------- 324 RP+++ + + + I +AK+ P+LSL S+ N+ N W Sbjct: 276 WRPELKAAQLAINGAETSIKVAKAQNLPTLSLGASMG---TNTTSMSNNAWGTQIKTNFD 332 Query: 325 -SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 S G L +P+FD ++ + RA+ Q + Q+ Sbjct: 333 MSAGLTLSIPLFDNRNKRTAVNRAQFERQSSMLELQD 369 >gi|332828492|gb|EGK01192.1| hypothetical protein HMPREF9455_02384 [Dysgonomonas gadei ATCC BAA-286] Length = 442 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/300 (18%), Positives = 123/300 (41%), Gaps = 26/300 (8%) Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 I++ L +A + A+ N+ +++ Y+D KE + + L K+ +E + + Sbjct: 111 QIKADELTLQAAMEGLKKAQENLELQVVSLYLDVLFKKEILKAYQEQAGLSKQQVERTSM 170 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 G L ++A++ ES++ + +++ N+S L + + + + + Sbjct: 171 LVESGKVPTSQLYDIKAQLAKDESNVTMADNDLALSLLNLSQALNLASNDAFDIEEPKVD 230 Query: 254 N---------FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 N PN + +GI +P I+ E KL S + +A++ +P+L Sbjct: 231 NIVDNNLGSVLPPNQVYQMALGI-------KPHIKEAEYKLESSKKTLKVAQAGYWPTLG 283 Query: 305 LNGSIALTHDNSFPGYNTHWS-----FGPK-----LYLPIFDKGKIKSNIRRAESSAQEQ 354 + + ++ + N +S FG + L +PIF++ + ++ +R A S + Q Sbjct: 284 FSAGYSTSYQSVSGQDNVSFSKQIRDFGSEYLSFSLSIPIFNRFETRNRVRSARLSIENQ 343 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + L KE++ A S + A E +S + Y G+ ++ + Sbjct: 344 NLALDNVKLALYKEIQQAYQSAVSSQAKYNSASKAYEAADESFKYARERYDIGKSTVFEF 403 >gi|292670317|ref|ZP_06603743.1| type I secretion outer membrane protein [Selenomonas noxia ATCC 43541] gi|292648048|gb|EFF66020.1| type I secretion outer membrane protein [Selenomonas noxia ATCC 43541] Length = 456 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 23/296 (7%) Query: 135 IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLK 194 IES +A + A+ + ++I +Y +A ++I + ++ Y +++ Sbjct: 103 IESGEIGARAARFATERAREELKYEVISAYWNAAEALKKIDVQRDTVNKYDAHLQNVTAL 162 Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 + GA +++ +++ E+ + ++ E ++ +N+ + LL E + + + Sbjct: 163 YGAGAQARIDVLRSSVELSNARQELIRAENTYEVNLAALRNLLNIDRAEPIQLTTEVA-- 220 Query: 255 FQPNLYIPINIGIPADLI----RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 Y P + D I RNR D+ + +KL + IAK+ P++ L Sbjct: 221 -----YQPFETSMQ-DCIAYAYRNRLDLAAERQKLRQRELAVDIAKAGKKPTVDLTVGSG 274 Query: 311 LT------HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 LT HD S + S G + IFD G + I AE+ + ++T Sbjct: 275 LTSQFRPRHDTS---SDVSASVGVRW--NIFDSGVTRGQIEAAEAERDIALLNVKKTEET 329 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 ++ A ++ E +K T AV+ + ++ YR G LLDILD + A Sbjct: 330 IDLDLRKAYLNMREAEKRFTSTGDAVQQAQNDYYIANERYRAGEGILLDILDAQAA 385 >gi|116748208|ref|YP_844895.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] gi|116697272|gb|ABK16460.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] Length = 446 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 6/164 (3%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPK 329 NRP++ Y E ++ + +AK+ P L ++ T + PG HW G Sbjct: 254 NRPEVAYYESRVGVFKELLRVAKAGDKPRLDFQTNLGWSSYDTITDQLPG--QHWDAGIY 311 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L PIFD K + +A+S ++ + N E +A+ ++E +++ L+ Sbjct: 312 LSFPIFDGFLTKGKVIQAKSRLATTDFEMKKLLDNIALEARSAINRVDESIRVIEALEAT 371 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ + ++ + Y+ G + L++ D E ++L A+R Sbjct: 372 TTQAERLLHMAELGYKNGVKTKLEVDDAESNLLAARINLVKAQR 415 >gi|116049325|ref|YP_791872.1| outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|313106371|ref|ZP_07792608.1| putative outer membrane protein [Pseudomonas aeruginosa 39016] gi|115584546|gb|ABJ10561.1| possible outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310879110|gb|EFQ37704.1| putative outer membrane protein [Pseudomonas aeruginosa 39016] Length = 133 Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 62/117 (52%) Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 +FD G+I + I A+ EQ ++ VL A ++VENA +++ + ++ L+ V+ Sbjct: 8 LFDFGRIDAQIDLAKGQEAEQLAAYRLAVLRATEDVENAFSALVKREQQANVLEQGVDSL 67 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ S Y+QG SL+++L + + + A+ + A++ V + A+G G+ Sbjct: 68 SRARQASFEAYQQGVVSLIEVLQADDNLLRAADARAQAQTESARTGVAAFKALGGGW 124 >gi|332140117|ref|YP_004425855.1| outer membrane channel precursor protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550139|gb|AEA96857.1| outer membrane channel precursor protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 462 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 98/449 (21%), Positives = 182/449 (40%), Gaps = 92/449 (20%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ- 119 L ++ + AL + + QA + +AA E I RA L P S+ + + + G Sbjct: 23 LMQVYQQALANDPLVNQAKAQRDAAFEGISLSRASLLPQISGSVGYTHSESERFQLLGPD 82 Query: 120 --LDSDWKIDLFGQRRHIESSL---AN---LDSAY-------AQVDIAKLNVISKLIPSY 164 +D ++D + SL AN LD A AQ+ + +VI + + +Y Sbjct: 83 TIFTTDTEVDTLNYGLSLSMSLYDHANWLGLDRAEKVAEQSDAQLAASMQDVIVRTVTAY 142 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA--------EIKS-- 214 D ++ + ++ +E + +F G T+ + + +A EI++ Sbjct: 143 FDVLRARDNVEFVGAEKRAIERQLEQTRQRFEVGLTAITDVHEAQANYDSTVAQEIQAKN 202 Query: 215 -IESDIPTL--------EKSFRMNVHNISTLLGYPAT--EFLHYMQKQSNNFQPNLYIPI 263 +E + L ++ F +N N S + P T +L Q Q NL + + Sbjct: 203 QLEFALEALRVITGKYHDRLFGLNTENFSATMPVPETVDSWLETAQDQ------NLALLV 256 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAK--IGIAKSDLYPSLSLNGSIALTHDN------ 315 + +LA VAK I IA+S P+LSL+GS + D+ Sbjct: 257 D-------------------RLAMDVAKEDIAIARSGHLPTLSLSGSYGRSKDDVDAEIL 297 Query: 316 -----SFP-GYNTHW----SFGPKLYLPIFDKGKIKSNIRRAE------SSAQEQYITWQ 359 + P GY T + S G L +PI+ G + + +A+ S A EQ T++ Sbjct: 298 NDDGSTTPFGYETPYLDSQSIGISLNVPIYQGGSVSAQTSQAKYNYVAASQAAEQ--TYR 355 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +TV + V ++ ++ + L+ +V ++ + + G +++D+LD R Sbjct: 356 QTV----QSVRSSFNNVKASISTIRALEQSVVSADSALKATEAGFDVGTRTIVDVLDSTR 411 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L+ A+ +S + L A G+ Sbjct: 412 NLFDARRNLAGARYDFIQSVITLKQAAGT 440 >gi|153806774|ref|ZP_01959442.1| hypothetical protein BACCAC_01046 [Bacteroides caccae ATCC 43185] gi|149131451|gb|EDM22657.1| hypothetical protein BACCAC_01046 [Bacteroides caccae ATCC 43185] Length = 465 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 140/349 (40%), Gaps = 62/349 (17%) Query: 45 INIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYA 102 + +DTL + L + AL+QN+TI + R+ AA ++ + +A LFPS Sbjct: 30 LQVDTLNETKLPAQWDLQSCIDYALEQNITIRK--NRVTAASTQIDVKTAKAALFPSLSF 87 Query: 103 SISHRFI------------------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANL 142 S S + + N KT+ G L++ W + G +R L Sbjct: 88 STSQQVVNRPYQESSSRVSGSEIISTNSKTSYNGNYGLNASWTL-YNGSKRLKTIQQEKL 146 Query: 143 DSAYAQVDIA-KLNVISKLIPS-YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 ++ A++D+A N I + I YI + E + + L + + G+ Sbjct: 147 NNQVAELDVATSENSIQESIAQIYIQILYAAESVRVNENTLQVSIAQRDRGQELLNAGSI 206 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 +K +LEA++ + + T + +TL Y N N+Y Sbjct: 207 AKSDFAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELDGENEM--NIY 254 Query: 261 IPI----NIGIPADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 +P N+ P R+ RP+I + + S I IAKS P++SL+ Sbjct: 255 LPALSDENVLSPLPAKRDVYVSALALRPEIEASKLNVNASELGIDIAKSGYLPTVSLSAG 314 Query: 309 IALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I H D +F G+N S G + +PIF+ + KS +++A+ Sbjct: 315 IGTNHTSGSDFTFGEQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 361 >gi|150396368|ref|YP_001326835.1| TolC family type I secretion outer membrane protein [Sinorhizobium medicae WSM419] gi|150027883|gb|ABR60000.1| type I secretion outer membrane protein, TolC family [Sinorhizobium medicae WSM419] Length = 456 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/333 (20%), Positives = 140/333 (42%), Gaps = 44/333 (13%) Query: 138 SLANLDSAYAQV----DIAKLNVISKLIP---SYIDARHFKERISIAHQILDLYKKNIEL 190 +L N+ +A A+V + K N I L+ SY + ++ +SI Q L ++ + Sbjct: 109 TLNNVRAAEAEVFSSRETLKANEIQILLSAAQSYANIARDQQIVSIRRQNLAFLREQLNA 168 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + + G ++ + + +AE+ + +S + + + ++G T Sbjct: 169 AQARLDVGEGTRTDVSQAQAELANAQSLLVAAVAQLKQSEAVYVQIVGAAPTGI------ 222 Query: 251 QSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL 303 QP P +P L +R P I + + + ++ A+ + P + Sbjct: 223 ----RQPG---PATKAMPRSLDQAVATGLRENPQILAAQYAVDSAGYQVKSAEGTMLPGV 275 Query: 304 SLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI------ 356 L G++ N+ G +T S +L +PI+ G IR+A+ +Q I Sbjct: 276 VLQGAVTRNTGNAGQGLDDTTASVTARLEVPIYQGGAEYGQIRQAKEILGQQRILVDSAR 335 Query: 357 -TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ-GRYSLLDI 414 + Q+TV++A ++E+AL I + ++ A+E +I R+ G+ + LD+ Sbjct: 336 ASVQQTVVSAHAQLESALARIRASRSQISAANLALE--------GVIEERKVGQRTTLDV 387 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 LD ++ + L+ A+R + L A+G Sbjct: 388 LDAQQDVLDAQESLAGAQRDAVVASYALLAAMG 420 >gi|289548573|ref|YP_003473561.1| outer membrane efflux protein [Thermocrinis albus DSM 14484] gi|289182190|gb|ADC89434.1| outer membrane efflux protein [Thermocrinis albus DSM 14484] Length = 435 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 168/418 (40%), Gaps = 47/418 (11%) Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASI----SH 106 LV++ALQ N I + + A++ + + R FP YA + Sbjct: 24 LVEMALQNNREIRASQREVEASRLELRAARGAYFPRLKLEETYTRTDLPVYAFMMRLQQE 83 Query: 107 RFIPNLKTN-----STGQLDSDWKIDL---FGQRRHIESSLA--NLDSAYAQVDIAKLNV 156 R P N +T ++ + +++ G + SLA N ++ + + + +V Sbjct: 84 RLGPQDLANINNPPTTSNFETKFTLEIPIWLGGKVQAGVSLAEKNYKASLLESERLRQDV 143 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + K +YIDA KE I +A Q + K+++ L+ G +++ + + S Sbjct: 144 VLKTYEAYIDASVAKESIKVAQQAVKDAKEHVRLAKQMNQVGVALFSDVLRAQVYLSSAL 203 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + ++++ I ++G P EF + P + I + + + R Sbjct: 204 QKEEEAKNAYKVAKKGIELVVGKPLGEF----DVKGVEGCPTVQIE---DLKKEALVRRK 256 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPGYNTHWSFGPKLYLPIF 335 D++ E+++ + SD P + GS L+ D F + + G L F Sbjct: 257 DLKALEERINMMRSMYYYVLSDNLPQIYAFGSYILSSKDRPFGSGGSGYLIGVGLSW-TF 315 Query: 336 DKG-----KIKSNIRRAESSAQEQYITWQETVLNAI-KEVENALTSINEDKKIVTKLQHA 389 D G K +S + R E S +E+ QE VL + K + + ++N T Q Sbjct: 316 DTGLTTFHKAQSQLER-ERSLREKLKLMQEKVLFDLDKNYADYVNALN----AYTSAQDR 370 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 V+ ++ + + YR G ++D+LD + K DL A + K+YV L G Sbjct: 371 VKASEEVVRVMETRYRNGLARMVDLLDAQTELDKARFDLVKATGECNKAYVRLLHTAG 428 >gi|169883786|gb|ACA97988.1| CzrC [Pseudomonas aeruginosa] Length = 428 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/329 (20%), Positives = 144/329 (43%), Gaps = 19/329 (5%) Query: 126 IDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ++L G+R +E + + A+ Q+++ + + +++ +Y A +ER+ +A LDL Sbjct: 104 LELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAALTAQERVRLAKTSLDLA 163 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ ++ + + G+ S + V+ + + + D+ E + +S+ P F Sbjct: 164 RRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQRTYVQLSSTWDEPQPGF 223 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKLADSVAKIGIAKSDLYP 301 +P +I A L+R+ P +R +++A A++ + K P Sbjct: 224 ARVGGALD-------AVPASITRGA-LLRHLDESPSLRLAAQEVARGEAQVDLEKRQRIP 275 Query: 302 SLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L++ SI +D + G + G + LP+FD+ + NI A+S A + + Sbjct: 276 NLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGNIYAAQSRADQARDLQR 331 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI-NYRQGRYSLLDILDIE 418 T+L E A + ++ + ++ + +S SM + G+++ LD+LD + Sbjct: 332 ATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTRGFEMGKFNFLDVLDAQ 391 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R V A A++ V + +G Sbjct: 392 RTLVGVRAQYVRALDAAAQARVSMERLLG 420 >gi|261855621|ref|YP_003262904.1| outer membrane efflux protein [Halothiobacillus neapolitanus c2] gi|261836090|gb|ACX95857.1| outer membrane efflux protein [Halothiobacillus neapolitanus c2] Length = 528 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 4/180 (2%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN--THWSFGPK 329 + N P L A +GI+++ P L+LN S + + G++ T F P Sbjct: 95 LSNNPQTHSVWASLRAQAASVGISEAAWLPKLTLNASAQQSQSTTSTGFSIPTQRIFAPN 154 Query: 330 LYLP--IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L L ++D G+ ++ I A++ +T+ + V +A D+ ++ + Sbjct: 155 LSLSWLLYDFGQREAGIAAAKAGLVAARFANDQTLQTVLSSVASAYYQSLADQVLIEVNK 214 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +VE +K++ + YR G+ ++ D+ + A A+ E L+ A++ ++ L A+G Sbjct: 215 RSVETAQKALDAAQARYRSGQATVSDLYQAKAALAQAEGTLATAEQTQLQNAGALASAVG 274 >gi|15597718|ref|NP_251212.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa PAO1] gi|218891500|ref|YP_002440367.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa LESB58] gi|254240953|ref|ZP_04934275.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa 2192] gi|9948577|gb|AAG05910.1|AE004679_4 outer membrane protein precursor CzcC [Pseudomonas aeruginosa PAO1] gi|126194331|gb|EAZ58394.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa 2192] gi|218771726|emb|CAW27500.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa LESB58] Length = 428 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 174/405 (42%), Gaps = 31/405 (7%) Query: 55 SFNDTS--LNKLVKIALQQN---LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 SFN TS L + ++ AL+ N + + TE + A++ A L P+ +S Sbjct: 35 SFNGTSISLEQALERALRSNPELAAVGRETEIASGARQQ-----AGLIPNP--DLSWSVE 87 Query: 110 PNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + ++L G+R +E + + A+ Q+++ + + +++ +Y A Sbjct: 88 DTRQGNRQTSVSIAQPLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAAL 147 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A LDL ++ ++ + + G+ S + V+ + + + D+ E + Sbjct: 148 TAQERVRLAKTSLDLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQR 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKL 285 +S+ P F +P +I A L+R+ P +R +++ Sbjct: 208 TYVQLSSTWDEPQPGFARVGGALD-------AVPASITRGA-LLRHLDESPTLRLAAQEV 259 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSN 343 A A++ + K P+L++ SI +D + G + G + LP+FD+ + N Sbjct: 260 ARGEAQVDLEKRQRIPNLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGN 315 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 I A+S A + + T+L E A + ++ + ++ + +S SM Sbjct: 316 IYAAQSRADQARDLQRATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTR 375 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G+++ LD+LD +R V A A++ V + +G Sbjct: 376 GFEMGKFNFLDVLDAQRTLVGVRAQYVRALDAAAQARVSMERLLG 420 >gi|333029353|ref|ZP_08457414.1| outer membrane efflux protein [Bacteroides coprosuis DSM 18011] gi|332739950|gb|EGJ70432.1| outer membrane efflux protein [Bacteroides coprosuis DSM 18011] Length = 457 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/310 (20%), Positives = 144/310 (46%), Gaps = 26/310 (8%) Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 R I S ++D A + +K+++IS++ +Y+ ++ + + + K N E+ Sbjct: 126 RSINMSKEDIDLAVEKARASKIDLISEVTKAYMQILLAQDSYRVLLKSYNQAKANFEIVD 185 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL------- 245 KF QG S+ ++ E ++++++ + + E + R++ + L+G + L Sbjct: 186 AKFNQGTVSEYDKIRAEVQMRNLKPSVVSAENAIRLSKLQLKVLMGISSPIDLEVEGSLN 245 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 Y Q + + + Y P++I + A+ + D + EK L S + + K++ P+L+ Sbjct: 246 EYEQLVAVDTFGSYYRPLSIDLSANTDLKQLD--HNEKLLQHS---LKLQKTNYMPTLTA 300 Query: 306 NGSIA-LTHDNSFPGYNTHW----SFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYIT 357 + + L+ +N F + W S G L +P+F I S +++++ + + I Sbjct: 301 SFNYTYLSMNNDFRIAHYRWYPSSSLGVTLSIPLFKASTI-SKVKQSKIELAKLNQARIN 359 Query: 358 WQETV-LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 Q + + A ++N S+ + V ++ A+ K ++ Y GR ++L++ D Sbjct: 360 LQRQLNMQAQSYIDNMQASVEQIDSNVESVRQAM----KGREIARTMYEVGRGTILELND 415 Query: 417 IERATAKVEV 426 E A + E+ Sbjct: 416 SEVALTQAEL 425 >gi|149279006|ref|ZP_01885140.1| outer membrane efflux protein [Pedobacter sp. BAL39] gi|149230285|gb|EDM35670.1| outer membrane efflux protein [Pedobacter sp. BAL39] Length = 444 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 25/241 (10%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++ ++ +Y++ KE I ++ +E ++ G+ ++ + +LEA++ Sbjct: 142 DITMQITQAYLNILIDKESILYNKDLVATSTAQLEQIRRQYKAGSVARKDVAQLEAQLAG 201 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-----PINIGIPA 269 + ++ +E + R + + LL P Q + +P+ I P + Sbjct: 202 DQYNLVAVENAERQDKITLKQLLQLPDVN-------QFDIVKPDTVITEKEVPPLAMLQH 254 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGI--AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF- 326 ++NRP+++ E L +A + + AKS P+L+L + ++ N P YN F Sbjct: 255 QALQNRPEVKNAE--LGRQIAGLNLQKAKSGYLPTLTLGAGMGTSYAND-PTYNAFRQFD 311 Query: 327 -------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G L +PIF K + K+N+ +A+ A +T + T ENA ++ Sbjct: 312 NNFYQQAGLNLSIPIFSKRQNKTNVAKAKIEADRAQLTLENTKTTLSLATENAFINVQNS 371 Query: 380 K 380 K Sbjct: 372 K 372 >gi|89891752|ref|ZP_01203255.1| outer membrane efflux protein [Flavobacteria bacterium BBFL7] gi|89516087|gb|EAS18751.1| outer membrane efflux protein [Flavobacteria bacterium BBFL7] Length = 436 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/272 (19%), Positives = 123/272 (45%), Gaps = 12/272 (4%) Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 I++ ++ + ++N++L+ + QG + ++ +E + +++ + T R NV N Sbjct: 169 IAVLEKVQEAAQENLKLAQNRLKQGYLQRADVLNVEVRLTEVQNQLQTA----RSNVQNA 224 Query: 234 STLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 S L Y + + + K S++ N+ I N + NR DIR + A Sbjct: 225 SDYLSYLMDDDGYTIYKPSDSLTIKNITIKDN-----NFSENRSDIRAMQLATTAYEAAN 279 Query: 293 GIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 K P L+ GS L +N F + G +L +F + +++++ + Sbjct: 280 KADKMAFLPRLNAFGSYELYDENLFQASANGYVIGAQLSWDLFKGSQRIGQADKSKATLE 339 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + + +++ V + E+ A +N+ K + Q A++ K+S+ + +++G Sbjct: 340 KSKLQYEQYVSKSKLEINKAQRMLNDAKNRLKLAQLALDQSKESLRIRTNRFKEGLEKTS 399 Query: 413 DILDIERATAKVEVDL--SIAKRQLAKSYVDL 442 D+L+ E A+ +++ ++ + A++Y++ Sbjct: 400 DLLNAETQFAQKQLEYYQTVFEFNYAQAYINF 431 >gi|94312766|ref|YP_585975.1| heavy metal cation tricomponent efflux outer membrane porin HmvC [Cupriavidus metallidurans CH34] gi|93356618|gb|ABF10706.1| heavy metal cation tricomponent efflux outer membrane porin HmvC (CzcC-like) [Cupriavidus metallidurans CH34] Length = 445 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/272 (19%), Positives = 121/272 (44%), Gaps = 18/272 (6%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ DA + R+ + + + LY K + + + G ++ + KL+ E +SD+ + Sbjct: 146 AWYDAVASQSRVEVLTETVGLYGKTQQANEARLKAGDVARADVTKLQLETLRAQSDLRSA 205 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA---DLIRNRPDIR 279 + + + ++ +G P T N P+ + ++ +P+ ++++ RPD+ Sbjct: 206 QSDYATSKAALAATIGLPGTLL-------DNRLVPD-WPALDAPVPSVDPEVLQRRPDVT 257 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFD 336 E +LA + + +A++ P +++ ++ N+ N S+G + +P+F Sbjct: 258 AAEARLAAAASARDLARAGRVPDVTVGAQYEHYPVSEANTTGSGN---SYGVFISIPLFV 314 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 + RRAE +L A ++E + + + + ++Q AV ++ Sbjct: 315 RHSFGGEARRAEVDYYAALDDRNRILLAAQNDIERLRSQLESARASLQQMQTAVLPAAET 374 Query: 397 MSLSM-INYRQGRYSLLDILDIERATAKVEVD 427 ++ S Y +G +LD+LD RA + +D Sbjct: 375 VAQSAEFAYTKGATGVLDLLDARRALRQTRLD 406 >gi|330902365|gb|EGH33422.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. japonica str. M301072PT] Length = 186 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 4 LRAIFSLFIV----LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWE 54 +R + + +V LL+GC VGP+Y +P PL P ++ + + NI + WW+ Sbjct: 1 MRTLCTYVLVMSTGLLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPLVSSAWWD 58 Query: 55 SFNDTSLNKLVKIALQQNL 73 F+D L+ V AL QNL Sbjct: 59 GFDDPLLSSFVSRALAQNL 77 >gi|73537803|ref|YP_298170.1| Outer membrane efflux protein [Ralstonia eutropha JMP134] gi|72121140|gb|AAZ63326.1| Outer membrane efflux protein [Ralstonia eutropha JMP134] Length = 426 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/366 (18%), Positives = 163/366 (44%), Gaps = 24/366 (6%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L+ + +A+ ++ T+ A ++A + I R PS + + + + T Sbjct: 50 TLDTALALAIARSPTLSAARRELDATEGGITQARTIPNPS----VGYEMEDTRRASRTTT 105 Query: 120 LDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 I+L G+R I ++ + A AQ A+ ++ + +I ++ +ER+S+A Sbjct: 106 AQVSVPIELGGKRSARIGAAQKARELASAQFSNAESDLRATVIGAFFQVLVAQERVSLAE 165 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + + + + + + G S + + E E + E ++ + ++ G Sbjct: 166 SSVGIATRGTQAAARRVAAGKVSPVEQTRAEVEQANAELELAEARATLDAARQQLAAQWG 225 Query: 239 YPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 L S + + P+ +P + + + P++R + ++A A + + + Sbjct: 226 ----SQLPVFASASGDLEALPSRPLP---NVLDEALDTAPEMRASQSEMARRQAIVNVER 278 Query: 297 SDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQE 353 S YP +++ S+ + +S GY + G L LP+FD+ G + + IR+A+ +A E Sbjct: 279 SRQYPDVTV--SVGAKREYSSDRGY--YPVLGISLPLPLFDRNQGNLYTAIRQADKAADE 334 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 T + + + +++ N L +++ + + + Q + +++ + + G+++ L+ Sbjct: 335 SRAT-RVRLASDLRQASNQL-ALSRNSALTLR-QTVLPAAQRAYQAASQGFEAGKFAYLE 391 Query: 414 ILDIER 419 +LD +R Sbjct: 392 VLDAQR 397 >gi|320530696|ref|ZP_08031740.1| outer membrane efflux protein [Selenomonas artemidis F0399] gi|320136983|gb|EFW28921.1| outer membrane efflux protein [Selenomonas artemidis F0399] Length = 468 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 29/280 (10%) Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++I +Y +A ++ + + + Y ++ + GA +++ +++ E+ + + Sbjct: 135 EVIAAYYNAVEALKKTEVQREAVGNYDAHLGNVTALYEAGAQARIDVLRSSVELSNARQE 194 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR----N 274 + + E ++ +N+ + LL E LH S Y+P + D I N Sbjct: 195 LISAENAYEVNLATLRNLLNMDRGEELHLTTDVS-------YVPFEKTVQ-DCISYAYGN 246 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGYNTHWSFGPKLYLP 333 R D++ Q+ LA + IAK+ P+++L GS T + S + Sbjct: 247 RRDLQVQKDTLAQRELAVDIAKAGKKPTVNLTVGSGITTQFRPHNDTSRDVSASVGVNWN 306 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN--------ALTSINEDKKIVTK 385 IFD G ++ I AE+ ++T L +++ E A ++ E +K T Sbjct: 307 IFDSGVTRAQIDAAEAE--------RDTALLNVRQAEETIDLNLRKAYLNLREAEKRFTA 358 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 AV+ ++ ++ Y G LLD+LD + A +K + Sbjct: 359 TGDAVKQAEEDYFIASRRYSAGEGILLDVLDAQLALSKAK 398 >gi|254235519|ref|ZP_04928842.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa C3719] gi|126167450|gb|EAZ52961.1| outer membrane protein precursor CzcC [Pseudomonas aeruginosa C3719] Length = 428 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 174/405 (42%), Gaps = 31/405 (7%) Query: 55 SFNDTS--LNKLVKIALQQN---LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 SFN TS L + ++ AL+ N + + TE + A++ A L P+ +S Sbjct: 35 SFNGTSISLEQALERALRSNPELAAVGRETEIASGARQQ-----AGLIPNP--DLSWSVE 87 Query: 110 PNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + ++L G+R +E + + A+ Q+++ + + +++ +Y A Sbjct: 88 DTRQGNRQTSVSIAQPLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAAL 147 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A LDL ++ ++ + + G+ S + V+ + + + D+ E + Sbjct: 148 TAQERVRLAKTSLDLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQR 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKL 285 +S+ P F +P +I A L+R+ P +R +++ Sbjct: 208 TYVQLSSTWDEPQPGFTRVGGALD-------AVPASITRGA-LLRHLDESPTLRLAAQEV 259 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSN 343 A A++ + K P+L++ SI +D + G + G + LP+FD+ + N Sbjct: 260 ARGEAQVDLEKRQRIPNLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGN 315 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 I A+S A + + T+L E A + ++ + ++ + +S SM Sbjct: 316 IYAAQSRADQARDLQRATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTR 375 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G+++ LD+LD +R V A A++ V + +G Sbjct: 376 GFEMGKFNFLDVLDAQRTLVGVRAQYVRALDAAAQARVSMERLLG 420 >gi|58428819|gb|AAW77856.1| outer membrane efflux protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 225 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 58/110 (52%) Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R E+ A + TVL A++EV+ L+ +D + L+ A + + ++S + Sbjct: 104 ARVRATEAGADAALAQFDHTVLQALREVQTTLSRYAQDLDRLHLLEQAQQQAELALSQNR 163 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ GR L LD ER A ++ L+ A+ Q+++ + L++ + G++ Sbjct: 164 RLYQSGRTPYLSSLDAERTLATADMTLANAQAQVSQDQIQLFLTLDGGWD 213 >gi|298291908|ref|YP_003693847.1| type I secretion outer membrane protein, TolC family [Starkeya novella DSM 506] gi|296928419|gb|ADH89228.1| type I secretion outer membrane protein, TolC family [Starkeya novella DSM 506] Length = 469 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 76/351 (21%), Positives = 147/351 (41%), Gaps = 49/351 (13%) Query: 97 FPSSYA-SISHRFIPNLKT-NSTGQLDSDWKIDLFGQRRHIESS--LANLDSAYAQVDIA 152 FPS + +IS LKT NS +S + GQR + ++ L LD+A A Sbjct: 104 FPSGFGITISQTIYDGLKTANSVRSAESQVR----GQRELLRNTEQLVLLDAATA----- 154 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 Y++ + + Q L+ ++ + + +F G ++ + + EA + Sbjct: 155 -----------YMNVLQNAALLELQKQNLEALREELRAARDRFAVGEITRTDVAQAEASV 203 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP----NLYIPINIGIP 268 + ES++ + + +N N F + + N P + +P N+ + Sbjct: 204 ANAESELALAQSN--LNTAN---------AVFYQVIGLRPNKLTPGRPIDRLLPKNLNLA 252 Query: 269 ADLIRNR-PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 DL +R P ++ E + ++ + +A+S L P+L+LNGS A + NS + Sbjct: 253 VDLGLSRHPAVKAAEFAVDAGLSNVKVAESALSPTLTLNGS-ASSDYNSTDNVERQTAAA 311 Query: 328 PKLYL--PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL---TSINEDKKI 382 L L PI+ G + IR+ + + + I E +N + N + + K Sbjct: 312 ATLNLTVPIYQGGAEYATIRQTKETLGQLRI---EVDVNREQVRANVVQFWGAWEAAKAA 368 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + Q +V ++ ++ +R G+ + LD+L+ + A L IA+R Sbjct: 369 IESAQASVAANEIALRGVREEWRVGQRTTLDVLNAQTALFDARASLVIAQR 419 >gi|302343205|ref|YP_003807734.1| outer membrane efflux protein [Desulfarculus baarsii DSM 2075] gi|301639818|gb|ADK85140.1| outer membrane efflux protein [Desulfarculus baarsii DSM 2075] Length = 470 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 43/270 (15%) Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 ++K+E E+ S + + +++ +++TLLG P Q + + P Y P+ Sbjct: 206 VLKVEVELSSAQQEEVKTANYVALSLASLNTLLGLPVDG-----QLEVEDILP--YKPLK 258 Query: 265 IGIPADLIRN-----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-- 317 + D RN RP+++ + + + + AKS+ YP +S+ GS +T D + Sbjct: 259 LDY--DDARNQARANRPELKSIKLGIEQANWNVTKAKSEYYPQVSVKGSYDMTSDEAGLG 316 Query: 318 --PGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EV 369 P Y+ ++W+ L +F G + + +A + + E L ++ +V Sbjct: 317 DSPYYDQSNWTVAAGASLNVFQWGATAAEVNKARADVRR-----AEMALKGLRDQVDLQV 371 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-- 427 + A + E +K + Q AV+ +++ ++M YR+ + ++LD + K + + Sbjct: 372 KEAYLYLKESEKNIQTSQVAVKQAEENYRITMERYREQLTTNTELLDAQTLLTKAQNNYF 431 Query: 428 -----LSIAKRQLAKSYVDLYIAIGSGYNP 452 + AK QL + A+G+G +P Sbjct: 432 NSLGVFNTAKAQLLR-------AMGAGLDP 454 >gi|209886833|ref|YP_002290690.1| outer membrane efflux protein [Oligotropha carboxidovorans OM5] gi|209875029|gb|ACI94825.1| outer membrane efflux protein [Oligotropha carboxidovorans OM5] Length = 436 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 82/390 (21%), Positives = 161/390 (41%), Gaps = 46/390 (11%) Query: 64 LVKIALQQNLTI-------LQATERINAAKENILSVRADLFPS--------------SYA 102 L A Q LT+ L A+ R+ AA+ +I R S S+ Sbjct: 34 LASAAYSQTLTMGAALQRALAASPRLTAAERDIGIARGQRVQSGALLNPQISYEQDNSFG 93 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLI 161 S ++R + ++ L +L+G+R I + A LD+A + +L V+S+ Sbjct: 94 SGAYRGTRSAEST----LQISQMFELWGKRDARIAAGQAGLDAATIERRSVRLEVLSETA 149 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 ++++ + RI I Q +D K L + GA+S + EA +++D Sbjct: 150 IAFVNVLGLQRRIQILDQQVDAINKITPLLQRRVEAGASSVAETGRAEAASALVKADRER 209 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++ + ++ L+G P+ +F +P + + I A+ P + Sbjct: 210 VKSALASARRELAVLIGDPSPKFRAVAGSLEAVGKPPGFQSVVAAIDAN-----PQLVRW 264 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + A A++ +A+ YP ++ S+ N +S + +P+FD+ + Sbjct: 265 KAIYAQRHAELLLARLKPYPDVT--ASVGWRRYNETGDSAVRFSL--SVPIPVFDQN--Q 318 Query: 342 SNIRRAESS---AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 NI A+ S Q Q + T++ ++L + I+ ++ + K S + Sbjct: 319 GNILSAQESLAKTQAQRKANRNTLIVVAGRAYDSLQGSLRELSIL----RSIGIPKSSAA 374 Query: 399 LSMI--NYRQGRYSLLDILDIERATAKVEV 426 + I Y QGRYSLL++L+ + + A+ + Sbjct: 375 AAAISEGYGQGRYSLLEVLNAQNSLAQARL 404 >gi|149375090|ref|ZP_01892863.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter algicola DG893] gi|149360979|gb|EDM49430.1| RND efflux system, outer membrane lipoprotein, NodT family [Marinobacter algicola DG893] Length = 138 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 56/114 (49%) Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 + D G+ ++ + +AE+ ++ I +++ + +EV +AL + + + V Sbjct: 7 LLDFGRAEALVNQAEARQRQALIAYRQAIQTVFQEVLDALVGLRGSDECLQTRARQVAAL 66 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + + + + G S ++LD ER E+DL KR +S V+LY A+G Sbjct: 67 RNTTERARLRFEGGASSYPEVLDAERRWFTTELDLVATKRDRLRSMVNLYRAMG 120 >gi|149197377|ref|ZP_01874428.1| Outer membrane efflux protein [Lentisphaera araneosa HTCC2155] gi|149139395|gb|EDM27797.1| Outer membrane efflux protein [Lentisphaera araneosa HTCC2155] Length = 445 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 108/423 (25%), Positives = 175/423 (41%), Gaps = 75/423 (17%) Query: 57 NDTSLNKLVKIALQQNLTILQATERINAAKENILSVR-ADLFPSSYASISHRFIPNLKTN 115 +D L KL K AL N +I A N + L V A P + S +H F ++T Sbjct: 47 HDEQLLKLKKEALANNPSIRAA---YNNWQAEFLKVNTAGDLPDPFVSFTHYF-EEVETR 102 Query: 116 STGQ---LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK--LNVISKLIPSYIDARHF 170 + Q ++ K+ FG R ++ S + + AQ D+ L V +L Y D + Sbjct: 103 TGPQKQAVNLIQKLPWFG-RLDLQHSTQSKKARAAQADLQSRTLKVFKELEQLYYDFYYL 161 Query: 171 KE--RIS------------IAHQIL-------DLYKKNIELSHLKFTQGATSKLSLVKLE 209 +E RI+ IA I+ DL K +EL H++ + A KL + L+ Sbjct: 162 QEASRIARENKGLLLSFEPIARNIIKTGQSSKDLIKLQVELGHIE-NRIAHLKLRYMPLK 220 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 + + + + P +F H ISTL E LH Sbjct: 221 SRMNELLNLAPGTAITFTAKPHKISTLKS--KKELLH----------------------- 255 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK 329 + N P+++ E KL + +I +AK D YP S + + + + G TH G Sbjct: 256 AIYANNPELKSFEFKLNSASDQILLAKKDHYPDFS----VGVKYIRTSGGDTTHPDDGKD 311 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQ-YITWQETVLNAI----KEVENALTSIN---EDKK 381 PI + + + SA EQ I +E++ N+ +E+E ALT+ +D Sbjct: 312 ---PIMLTVGMTIPLNQKRYSALEQSAINHRESLANSKIGKRRELERALTTTLFELQDSA 368 Query: 382 IVTKLQHAVELHKKSMSL--SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 +L + K S SL ++ +YR G+ S L+++DI+R E A+ ++ K Y Sbjct: 369 RTYRLYTNTLIPKNSQSLKITLQSYRNGKSSFLELIDIQRQQLDFEHMQKKAETRIYKQY 428 Query: 440 VDL 442 L Sbjct: 429 ARL 431 >gi|198276616|ref|ZP_03209147.1| hypothetical protein BACPLE_02812 [Bacteroides plebeius DSM 17135] gi|198270141|gb|EDY94411.1| hypothetical protein BACPLE_02812 [Bacteroides plebeius DSM 17135] Length = 501 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/326 (21%), Positives = 133/326 (40%), Gaps = 46/326 (14%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI---------- 109 SL + AL++N+ + Q + ++ ++ + +A LFPS + H + Sbjct: 81 SLEDCINYALEKNIQLQQNKISLQESEVDVKTAKAALFPSLSFNTGHNIVNRPYQENSAT 140 Query: 110 --------PNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV--- 156 N KT G L + W + GQR L N+ +IA+L V Sbjct: 141 VSGTEIISSNNKTTYNGSYSLSAQWTLWNGGQR------LNNIKQQKKNQEIAELTVAET 194 Query: 157 -------ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLE 209 I+KL ++ + E ++I L++ K E + F QG+ SK L +LE Sbjct: 195 ENTLKEEITKL---FLQILYADESVNINKGTLEVSKATYERAKELFNQGSISKADLAQLE 251 Query: 210 AEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA 269 A++ + + + T E S R + +L + ++ + +P + Sbjct: 252 AQVGNDQYQLVTSESSLRNYKLQLKQMLELDGNMEMELELPVLDDEKVMQLLPNQDEVYQ 311 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP-----SLSLNGSIALTHDNSFPGYNTHW 324 + NRP+I+ + + +S I AKS YP + + + + + +N W Sbjct: 312 TALANRPEIQSSKLSIDNSKLAISAAKSGYYPSISLSASTSSTTNNASQNNWAQQMKYGW 371 Query: 325 S--FGPKLYLPIFDKGKIKSNIRRAE 348 + G + +PIF+ + KS + +A+ Sbjct: 372 NNIIGLTVSVPIFNNRQTKSAVEKAQ 397 >gi|320352692|ref|YP_004194031.1| outer membrane efflux protein [Desulfobulbus propionicus DSM 2032] gi|320121194|gb|ADW16740.1| outer membrane efflux protein [Desulfobulbus propionicus DSM 2032] Length = 455 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/290 (18%), Positives = 122/290 (42%), Gaps = 31/290 (10%) Query: 147 AQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A VD +L +++ + ++++A+ + I IA Y + +E + ++ GA ++ Sbjct: 139 ALVDSQRL-LVTSVAEAFLNAQLAQTYIDIARADETFYTRQLEDAQNRYDVGAGPWGDIL 197 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 ++ ++ S ++ + ++ F + ++ L+G P F PNL + Sbjct: 198 NIKVQVNSAKTSLIRSQREFEAAGYGLAALMGLPEA-----------TFPPNLRLEALDK 246 Query: 267 IPA-------------DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 A D + RPD+R E + + A G+AK+ YP + + G++ Sbjct: 247 ARAATSSKEKTEQLIQDALATRPDVRRLENVVKQTDAATGMAKAPFYPKVHIAGALEGAK 306 Query: 314 DNSFPGYNTHWSFGPKLYL----PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 + G + FG + + ++ G K+ + AE + +E T + E+ Sbjct: 307 EGDM-GLDED-DFGNTVAMNMSWNLYAGGADKARLIEAEQARREAGYTLAGLRNSIAAEI 364 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 L + ++ V + V+L +++ L+ Y G SL+ + + +R Sbjct: 365 RQDLALLAAAEEQVRLQRETVQLVEENRDLAKNEYEAGEASLVRLNEAQR 414 >gi|313669380|ref|YP_004049807.1| outer membrane efflux protein [Sulfuricurvum kujiense DSM 16994] gi|313156577|gb|ADR35254.1| outer membrane efflux protein [Sulfuricurvum kujiense DSM 16994] Length = 425 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 17/179 (9%) Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY 320 IP + +L++ P+++ E LA + + +K+ Y +LS + D S Y Sbjct: 233 IPSIESMQEELLQKSPELKRLEAALAQARSNYNASKTLGYGTLSAVAGYGV--DRSLSSY 290 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESS---AQEQYITWQ----ETVLNAIKEVENAL 373 ++ + G K LP+FD G + + ++++ S AQ++Y + E + NA + E A+ Sbjct: 291 DSSY-VGLKGNLPLFDGGYLDAQMQKSALSVQIAQQEYENTKKQLFEELFNAASDHEQAI 349 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 SI + ++ L+ + L + Y QG + +D+L+ + A + LS AK Sbjct: 350 QSIEAKRGLIDALEQTLHLMEG-------RYTQGLATYVDVLEAQNALDNAKNGLSWAK 401 >gi|299137327|ref|ZP_07030509.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] gi|298600732|gb|EFI56888.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] Length = 490 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 15/335 (4%) Query: 129 FGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 FGQR ++++ A +A A A V + +Y +ER+ A Q L + Sbjct: 142 FGQRAAKVDAATAEKLAAGANFIQANQQVAFSVASAYYKLLTEQERLEAARQTLKTAQAT 201 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + + + G ++ ++ AE D+ + + ++ ++ LG + ++ Sbjct: 202 QDAAETQLLNGRSTLPDVLNARAETSQAVFDLESADGDEKVARVALTEELGVEPSPDINV 261 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP--SLSL 305 +++ L +PIN I + +RPD+ Q ++ + I AKS+ P SLS Sbjct: 262 DGQKNAPLPDALTLPINTLI-GRAMSDRPDLMAQVAEIRAADDAIRSAKSEYLPKISLSA 320 Query: 306 NG---SIALTHDNSFPGYNTH--WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 NG SI T D G + WS + IFD G K+ + A S +E +E Sbjct: 321 NGAQTSIWPTTDFGQLGNASEPTWSATVGVQWRIFDGGARKNELAEARSKKREAQDDLRE 380 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL---HKKSMSLSMINYRQGRYSLLDILDI 417 A +EV A + + + K AV L S S S+ Y+ G +L+D++ Sbjct: 381 KRDQATREVWTAYIAF---RAALRKQDAAVALLASANSSYSASLEAYKYGVKNLIDVVTA 437 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 E+ A+ A+ QL V L + G+ P Sbjct: 438 EKQLAQARYSSVSARSQLFLEAVSLEFSTGNLLRP 472 >gi|294674712|ref|YP_003575328.1| outer membrane efflux protein [Prevotella ruminicola 23] gi|294473204|gb|ADE82593.1| outer membrane efflux protein [Prevotella ruminicola 23] Length = 443 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 45/303 (14%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y + E + + Q+L+ KKN E G SK L +L A+ + E +I Sbjct: 150 YTQILYLDENVKVNEQMLETAKKNEERGQEMVNVGKMSKADLAQLSAQRATDEYNI---- 205 Query: 224 KSFRMNVHNISTLLGYP-----------ATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 V S LL Y TEF + + ++ +P G+ + Sbjct: 206 ------VETRSQLLNYKLQLKQLLEITDETEFDVAIPQITDTMVLK-EVPTLQGVYEQAL 258 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFP----GYNTHWSF-- 326 NRP+I + + S + +AK+ P++S+ GS T NS G +F Sbjct: 259 LNRPEIERSKLAIKSSDVNLSVAKAGWLPTVSMTGSFG-TSTNSLSSNGWGKQMKTNFDA 317 Query: 327 --GPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVE-NALTSINEDK 380 G + +PI+D K+++ +A + SAQ + Q+T+ + I+E NA T+ + K Sbjct: 318 MAGVSVSVPIYDGRSTKTSVNKAKIQQLSAQLDLLDQQKTLYSTIQEYWLNAQTNQQKYK 377 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 VE ++S L +R G ++++++ T K + LS + QL Y Sbjct: 378 AACA----TVESEQQSFDLLQEQFRLGLKNIVELM-----TGKDNL-LSAQQNQLQSKYQ 427 Query: 441 DLY 443 +Y Sbjct: 428 TIY 430 >gi|117924032|ref|YP_864649.1| TolC family type I secretion outer membrane protein [Magnetococcus sp. MC-1] gi|117607788|gb|ABK43243.1| type I secretion outer membrane protein, TolC family [Magnetococcus sp. MC-1] Length = 449 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/364 (19%), Positives = 159/364 (43%), Gaps = 25/364 (6%) Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNSTGQLDSD 123 ALQ N + + +++AKE + A L P+ S A+ + F K+ S + Sbjct: 49 ALQTNPDVRSSRASLDSAKEKPVGTTAALRPTITFTSTATHTASFYGTTKSKSDPRA--- 105 Query: 124 WKIDL----FGQRRHI--ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 +K+DL + ++ + E ++ +++A V + I + Y+ +E +++ Sbjct: 106 YKLDLSQPIYNKQLFVADEQAMPYVEAAKEDVQNTLQDTILSVAEVYVGLLEAQEVAALS 165 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 L + +E + +F G ++ + + EA + S E+ + + + + ++ ++ Sbjct: 166 VNNLKVTSSQLEATRARFEVGEITRTDVRQGEARVASAEAQVKSNQNAVSVSEAKYREVV 225 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI--A 295 G P + + + +L I A +RPD+ +++L V ++G+ A Sbjct: 226 GMPPPQQMPVPSVEDALMHRDLDQLI-----AQAEAHRPDLLAAQERL--KVDQLGVNYA 278 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ YP+L+ + + T D ++F +P+++ G +S +R+A+ + Sbjct: 279 RAGHYPTLTFSANGTFTDDAEISTKTQDSRAYTFVLTAEVPVYEGGGTQSTLRQAKHTLA 338 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 VL +EVE AL + +VT + A+ + +++ ++ G + L Sbjct: 339 ASRADLDSQVLQIRREVEEALLNYRSALAVVTSYESALAASQDALNGVEQEFQVGTRTAL 398 Query: 413 DILD 416 D+LD Sbjct: 399 DLLD 402 >gi|206889974|ref|YP_002247971.1| outer membrane efflux protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741912|gb|ACI20969.1| outer membrane efflux protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 419 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 6/181 (3%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSFGPK 329 ++ PDI + + S KIG A+S +P + L+ T+ S G Y+ +S Sbjct: 37 LKKNPDILASKSTVEKSFFKIGEARSGYFPEIDLSLGYQRTYQESKTGEEYSKQYSGQIN 96 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENALTSINEDKKIVTKLQ 387 L +FD GK ++ E + WQ +T+L I V+ A S + KK Sbjct: 97 LTQTLFDFGKTSKQVQVQEELYKS--TQWQDKDTLLQTIYNVKEAYFSALKAKKQKETAL 154 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + K+ + L+ Y G +++ E + ++L A++QL+++ ++L +A+G Sbjct: 155 EVIRQSKRHLDLAKGFYEVGLKPKIEVTKAEVELSNATLNLITAEKQLSQALLNLKVAMG 214 Query: 448 S 448 + Sbjct: 215 A 215 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 71/367 (19%), Positives = 160/367 (43%), Gaps = 19/367 (5%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH-RFIPNLKTNS-- 116 SL + + IAL++N IL + + + I R+ FP S+ + R KT Sbjct: 28 SLQECIDIALKKNPDILASKSTVEKSFFKIGEARSGYFPEIDLSLGYQRTYQESKTGEEY 87 Query: 117 ----TGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 +GQ++ + FG+ + ++ S Q L I + +Y A K Sbjct: 88 SKQYSGQINLTQTLFDFGKTSKQVQVQEELYKSTQWQDKDTLLQTIYNVKEAYFSALKAK 147 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 ++ A +++ K++++L+ + G K+ + K E E+ + ++ T EK + Sbjct: 148 KQKETALEVIRQSKRHLDLAKGFYEVGLKPKIEVTKAEVELSNATLNLITAEKQLSQALL 207 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 N+ +G + Q++ + + ++I I RN P ++ + S++ Sbjct: 208 NLKVAMGAVDMQDFDIRQEEYAVRKLDEKELLDIAIE----RN-PQLQAIKFNKQASIST 262 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + K + P + + S +++ FP + W+ ++ LP+F +++A+ A Sbjct: 263 EELVKKEYMPKFTGSASYGYLNED-FP-LDKKWTLFLQMSLPLFSGWSTTYKLKQAK--A 318 Query: 352 QEQYITWQETVLNA--IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 Y +++E + +++N + E + + L+ A++ K+++ L+M Y G Sbjct: 319 DTTYYSYKEDSIRQQITSQIKNLFVQLKEASQKIETLKIALKQAKENLDLAMGRYEVGIG 378 Query: 410 SLLDILD 416 S ++++D Sbjct: 379 SSIEVVD 385 >gi|116050465|ref|YP_790716.1| CzcC family cobalt/zinc/cadmium efflux transporter outer membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gi|296389056|ref|ZP_06878531.1| CzcC family cobalt/zinc/cadmium efflux transporter outer membrane protein [Pseudomonas aeruginosa PAb1] gi|115585686|gb|ABJ11701.1| cobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family [Pseudomonas aeruginosa UCBPP-PA14] Length = 428 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 83/405 (20%), Positives = 174/405 (42%), Gaps = 31/405 (7%) Query: 55 SFNDTS--LNKLVKIALQQN---LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 SFN TS L + ++ AL+ N + + TE + A++ A L P+ +S Sbjct: 35 SFNGTSISLEQALERALRSNPELAAVGRETEIASGARQQ-----AGLIPNP--DLSWSVE 87 Query: 110 PNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + ++L G+R +E + + A+ Q+++ + + +++ +Y A Sbjct: 88 DTRQGNRQTSVSIAQPLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAAL 147 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A LDL ++ ++ + + G+ S + V+ + + + D+ E + Sbjct: 148 TAQERVRLAKTSLDLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQR 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKL 285 +S+ P F +P +I A L+R+ P +R +++ Sbjct: 208 TYVQLSSTWDEPQPGFAKVGGALD-------AVPASITRGA-LLRHLDESPTLRLAAQEV 259 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSN 343 A A++ + K P+L++ SI +D + G + G + LP+FD+ + N Sbjct: 260 ARGEAQVDLEKRQRIPNLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGN 315 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 I A+S A + + T+L E A + ++ + ++ + +S SM Sbjct: 316 IYAAQSRADQARDLQRATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTR 375 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G+++ LD+LD +R V A A++ V + +G Sbjct: 376 GFEMGKFNFLDVLDAQRTLVGVRAQYVRALDAAAQARVSMERLLG 420 >gi|288817352|ref|YP_003431699.1| outer membrane efflux protein [Hydrogenobacter thermophilus TK-6] gi|288786751|dbj|BAI68498.1| outer membrane efflux protein [Hydrogenobacter thermophilus TK-6] Length = 411 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 79/387 (20%), Positives = 166/387 (42%), Gaps = 55/387 (14%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + +AL+ N + + + +E+I RA + P S+S+ + K+ + G Sbjct: 19 TLEEAINVALKNNTQVKLSELDLKRVEEDIRKARAGILPQ--VSLSYSYTKLDKSLAFGF 76 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI--DAR--------- 168 ++ + +F + I D A D KL+ ++K + +YI D + Sbjct: 77 TPTERQSYVFEVNQSI------FDKAV--FDAIKLSKLAKDLQAYILEDIKRTVENQTKQ 128 Query: 169 ------HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + KE + + L +++N +L+ +++ G ++L++ +A++++ E+ Sbjct: 129 LFYALLYKKEVVKLYQDNLSYWEENYKLTKVQYEAGVVPMVNLLRSKAQLQTAEAQYQQA 188 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN---LYIPINIGIPA--DLIRNRPD 277 ++ ++ + L + + QP + P P L+ R Sbjct: 189 LADYKKSLEDFKAYLRWEG------------DIQPEGSLEFKPFQEDYPTLRKLLLERNS 236 Query: 278 IRYQEKKLADSVAK-IGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHW----SFGPK 329 KK + K I +AK YP++S G + T S G T W +FG + Sbjct: 237 TLLVAKKSVEVYEKRIDVAKDAYYPTIS--GFVTYQGNTGRRSLSG-GTEWIRGYTFGFQ 293 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +FD + ++NI +A +Q + +T+ +++ L IN K + L+ + Sbjct: 294 LNYHLFDGFQREANIAQANIDYLKQKEVYIDTLYTQDAQMKKTLEDINSLKAQIRALESS 353 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILD 416 +E K+++ LS YR G + L++L+ Sbjct: 354 LEAAKEALRLSTERYRYGVTNQLEVLE 380 >gi|282892393|ref|ZP_06300743.1| hypothetical protein pah_c253o008 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497795|gb|EFB40156.1| hypothetical protein pah_c253o008 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 403 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 38/311 (12%) Query: 130 GQRRHIESSLAN--LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 G +R + S + +A V++AKL ++++ ++ID +E++ I + + K+ Sbjct: 91 GGKRELRSKTTDYLFRAACLGVEVAKLQLLNRFTRAFIDLVAAQEQLRIVKEQNKIAKEV 150 Query: 188 IELSHLKFTQGATSKLSLV-KLEAEIKSIESDIPTLEK---SFRMNVHNISTLLGYPATE 243 + + K G K+S++ K +AEI +DI LEK +F +S G + Sbjct: 151 LYVVSAKVEAG---KVSIIQKHKAEISVANADI-LLEKVRVNFETAREQVSQFWGETVPD 206 Query: 244 FLHYMQKQSNNFQPNLYI---PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 F +S F N Y P ++ + + P+ + + + S+ + + KS Sbjct: 207 F------ESVGF--NFYFIQAPQSLDAYLAYLHDHPEWIQAQLEQSASLQSVYLEKSLAI 258 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG-----KIKSNIRRAESSAQEQY 355 P ++L+ D +N G L +P+F++ K ++N+R+ E S + Sbjct: 259 PDVTLSVGYKTIRDT----HNQGMILGASLPIPVFNRNQGNIEKSRANLRKLEDS----F 310 Query: 356 ITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + Q + N + + S +E K++ + +E ++ LS YR+G++ LD+ Sbjct: 311 MALQVLLENKSAAIHREFMRSYHESKRLKEGI---LEAALQAFKLSEEGYREGKFEYLDM 367 Query: 415 LDIERATAKVE 425 LD +R ++E Sbjct: 368 LDSQRTLFEIE 378 >gi|294339414|emb|CAZ87770.1| putative Integral outer membrane protein TolC, efflux pump component [Thiomonas sp. 3As] Length = 490 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 76/374 (20%), Positives = 156/374 (41%), Gaps = 42/374 (11%) Query: 88 NILSVRADL--FPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSA 145 N+LSV + +P S + + R L + G+L +++ + + L +A Sbjct: 115 NVLSVAPNSLNYPGSVNNFNTRIQAELPIYTGGKLQG-----------YLQQARSMLMAA 163 Query: 146 YAQVDIAKLNVISKLIPSY---IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 A A+ +I + +Y AR FK +A + L+ + ++ F QG K Sbjct: 164 QAGDQAARQQIIYHALQAYDGVYTARAFK---GVAGKALEAAQSQVKTVDSLFKQGVVIK 220 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL---LGYPATEFLHYMQKQSNNFQPNL 259 L L A+++ + + +++ M + L LG P + + P + Sbjct: 221 SDL--LSAQVRQEDVKLQQ-DQAADMEAQAMDALHVVLGVPLNQPI--------TLGPEV 269 Query: 260 YIPINIGIP----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--TH 313 + + G P + P I+ + ++A + KI +A++D YP + G++A T+ Sbjct: 270 MVTLPEGDPNAWVGQAMERNPKIQALQHQIAAAGGKIEVARADRYPQV---GAMARFDTN 326 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 D + + ++ G +L IFD G ++ + +A + E Q +V+++ Sbjct: 327 DPNLGFESRSYTVGAQLNWTIFDGGVTRNAVDQAVAQRMELQAKLQSEQNQLGMQVQDSY 386 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + V + AV+ +++ + Y G +L+++ + K DL +AK+ Sbjct: 387 RKAVDAANQVKTRELAVKQSEEAARIVSKRYADGVGTLVEVQGAQAQLDKARADLIMAKQ 446 Query: 434 QLAKSYVDLYIAIG 447 Q+ L +AIG Sbjct: 447 QVNLQRAALRLAIG 460 >gi|188584423|ref|YP_001927868.1| type I secretion outer hypothetical protein, TolC family [Methylobacterium populi BJ001] gi|179347921|gb|ACB83333.1| type I secretion outer membrane protein, TolC family [Methylobacterium populi BJ001] Length = 488 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/285 (20%), Positives = 121/285 (42%), Gaps = 34/285 (11%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 184 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIF 243 Query: 234 STLLGYPATEFLHYMQKQSNNFQP-NLYIPINIGIPADLI--RNRPDIRYQEKKLADSVA 290 ++G +Q +P + Y+P ++ A LI + P I + + Sbjct: 244 RQIVGVEP--------RQLAPGRPLDRYVPTSLD-QAILIGLKEHPQILSSLHAVDVAEL 294 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKG-------KIKS 342 ++ IA+ LYP + G++ +D FPG N S ++ +P++ G + K Sbjct: 295 QVKIAEGALYPQAQVTGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGGEYAAIRQAKE 354 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 N+ RA A + T + +++ +E + K V Q V+ ++ +++ Sbjct: 355 NVGRARLVADQDRDTIRASIVRTWGNLEAS-------KAQVIASQAQVQANEVALNGVRE 407 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R G+ + LD+L+ ++ V L A+R + D+ A+G Sbjct: 408 EARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVG 452 >gi|39997235|ref|NP_953186.1| metal ion efflux outer membrane protein family protein [Geobacter sulfurreducens PCA] gi|39984125|gb|AAR35513.1| metal ion efflux outer membrane protein family protein, putative [Geobacter sulfurreducens PCA] Length = 437 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/265 (20%), Positives = 115/265 (43%), Gaps = 24/265 (9%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + D ++R+ + + +DL ++ +E++ + G +L + + E+ E +E Sbjct: 144 FYDVMLAEQRLKLTDRSIDLNRQLLEVTKDRLAAGDIPELEMNLAKVELTRSEGARIEVE 203 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP----INIGIPADLIRNRPDIR 279 ++ + +G PA E N F N + + +G+ RPD++ Sbjct: 204 RALLQTRSRLFAFMGLPAGEAPAIAGTLDNGFSLNKNLADLKQLALGL-------RPDLK 256 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------FGPKLYLP 333 E + A I +A+++ P+L+ + THD T G +L +P Sbjct: 257 ALEAEKGRGDADITLAEAEKVPNLT--AGLFYTHDRRTDATGTGEEKVRDNLLGIRLSMP 314 Query: 334 I--FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKKIVTKLQHAV 390 I FDK + RA+ S+ E +T ++ ++VE A ++++N +K + + + Sbjct: 315 IPVFDKNQAGLQEARAKRSSSESRLTAATRIVE--RDVETAYISALNAEKVLSLYKSNII 372 Query: 391 ELHKKSMSLSMINYRQGRYSLLDIL 415 ++++ L+ YR G +L ++ Sbjct: 373 PQLEENLKLTQEAYRLGEVGILSVI 397 >gi|116625506|ref|YP_827662.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] gi|116228668|gb|ABJ87377.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] Length = 418 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/263 (19%), Positives = 108/263 (41%), Gaps = 17/263 (6%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ID K+ +++A + L ++ +E++ + G +K+ LV+ + +S + Sbjct: 137 AFIDVLQAKDNLALARENLQAFRNIVEVNATRVRAGDLAKVELVRTQVAALQFQSAVRQA 196 Query: 223 EKSFRMNVHNISTLLGY----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 E ++ + + TL+G P E M++ S + + DL+ R D Sbjct: 197 ESKLKIAGNRLQTLMGRRVPSPTFEATGTMRRDSTPVVMETVATQALDLRPDLLALRKD- 255 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 Q + A+ +++ K D H + G LP+F+K Sbjct: 256 --QARSQAELRSQLAQGKVDFTVGTEF-------HRQFYNGNANALGVFFSSPLPVFNKN 306 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + I RA Q+ + + +V NA ++++ ++H + + + Sbjct: 307 Q--GEIERARQEQQQILARIRAAEADVQNDVRNAWLQYATSRELLESIEHDLLDQAREVR 364 Query: 399 LSM-INYRQGRYSLLDILDIERA 420 +M +YR+G SL++ LD +RA Sbjct: 365 TTMEYSYRRGEASLVEFLDAQRA 387 >gi|253699470|ref|YP_003020659.1| outer membrane efflux protein [Geobacter sp. M21] gi|251774320|gb|ACT16901.1| outer membrane efflux protein [Geobacter sp. M21] Length = 419 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 20/266 (7%) Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++Y++ E F QG K+ + K EA + + + + + + ++ +G Sbjct: 161 EVYRQAEEF----FRQGIRPKVEVTKAEANLYAARTSLIRAGNNKEIARIELAGAMGTAE 216 Query: 242 TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 E ++ ++ P +P + D IR+RP+++ + + + + AKS P Sbjct: 217 QESRSLVEPPADG-SP---LPERQQVQLDAIRSRPELQQLSALKSAAQSALKTAKSGYLP 272 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQET 361 LS S+ D FP W G L +P+F +R E++A + +++ Sbjct: 273 VLSGTASLGYA-DRDFPPSGNVWGAGINLTVPLFSGFSSVEEVR--EATANVNAMEARKS 329 Query: 362 V--LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD--- 416 V L KEV +A E + Q VE +++ L+ Y +G S++++ D Sbjct: 330 VLRLQIAKEVGSAWLGCQEAMARMASTQKEVEAAEENRRLAQGRYHEGVGSIIEVTDAQS 389 Query: 417 --IERATAKVEV--DLSIAKRQLAKS 438 +E TA ++ D IA+ L ++ Sbjct: 390 QALEAQTAHIQAGYDYRIARAALYRA 415 >gi|116694532|ref|YP_728743.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113529031|emb|CAJ95378.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 413 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 59/284 (20%), Positives = 124/284 (43%), Gaps = 22/284 (7%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + DA +ER+++ ++L LY + + S + G S+ + KL+ + +SD+ Sbjct: 122 FYDAVVSQERVAVFKEMLALYDRTRQASETRLKAGDVSRADVTKLQLDALRAQSDMRQAM 181 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP---ADLIRNRPDIRY 280 + ++ +G P T + N + P++ +P D ++ RPD+ Sbjct: 182 TDHARDKAQLAQAMGVPGT--------LAGNRLVADWPPLDTPVPQVDPDTLQRRPDVTA 233 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGS-----IALTHDNSFPGYNTHWSFGPKLYLPIF 335 E +LA + A +A++ P +++ ++ T+ N + S+G L +P++ Sbjct: 234 AEARLAAAAAARDLARAGRVPDVTVGAQAEHYPVSATNTN-----GSGNSYGVFLTIPLY 288 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + RRAE +L A E+E + + ++ + +++ V + Sbjct: 289 VRHSNGGEARRAEVDYYAALDDRNRVLLEAGNEMERLRSQLEAARQSLRQMRDDVLPAAE 348 Query: 396 SMSLSM-INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 S++ S Y +G +LD+LD RA + +D A+ AK+ Sbjct: 349 SVAGSAEFAYGKGATGVLDLLDARRALRQTRLDSVSAQGDYAKA 392 >gi|167846020|ref|ZP_02471528.1| RND efflux system, outer membrane lipoprotein, NodT family protein [Burkholderia pseudomallei B7210] Length = 251 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 15/202 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + +L N ++ A R+ A+ A+ P ++S + Sbjct: 36 WWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ +H E +L + A A+L + Sbjct: 96 PDNVYYGPGPLANADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ +Y+D + IAH + EL+ + G ++L + + EA + Sbjct: 156 EANVVRAYVDFAKNYALLDIAHATYERQNALAELARKRLRAGIGTQLEVSQAEAPLPDYS 215 Query: 217 SDIPTLEKSFRMNVHNISTLLG 238 I + E++ ++ H ++ L G Sbjct: 216 RQIDSYEEAIQLGRHQLAALAG 237 >gi|39996053|ref|NP_952004.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] gi|39982818|gb|AAR34277.1| outer membrane efflux protein [Geobacter sulfurreducens PCA] Length = 424 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%) Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 D SFP W G +L +PIF + R ++ +E ++ L +EVE A Sbjct: 284 DRSFPPEGNTWGVGVRLTVPIFAGFATREKEREVAAALREVEARRRDQQLQVGREVEGAW 343 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + E V +E ++S +L++ YR+G +++++ D + Sbjct: 344 LGMREALARVESTGRELEAARESRTLAIERYREGVGTIIEVTDAQ 388 >gi|333031343|ref|ZP_08459404.1| outer membrane efflux protein [Bacteroides coprosuis DSM 18011] gi|332741940|gb|EGJ72422.1| outer membrane efflux protein [Bacteroides coprosuis DSM 18011] Length = 442 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/302 (21%), Positives = 128/302 (42%), Gaps = 12/302 (3%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL +A A + AK ++ + YI +E +A + L ++ ++ ++ G Sbjct: 124 NLKAAIADLKKAKEDLSINVTSKYIQVLFNQEITKVAENQITLSQEQLDRGTEQYNLGKL 183 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 SK L +L++ +K E + ++++ + +++ LL P+ +F + NL Sbjct: 184 SKAELAELKSRLKQDEMQFVEAQNNYKIALLDLTQLLELPSPDFFGIQPLDGDLGFDNLT 243 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH------- 313 P I A L + P I + + + I +A+S P LS + +I + Sbjct: 244 APTEIYESALLFK--PQIEAAQLRSESAKRSIKLAQSGFMPKLSFSANIGSGYFTIQGQD 301 Query: 314 DNSFP---GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 +F N + G L +PIF++ ++ +R A+ S Q I ++ KE++ Sbjct: 302 SEAFRRQLSNNLNKYVGFSLSIPIFNRFATRNQVRAAKLSLNNQLIQLEDQKKTLYKEIQ 361 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 A S + + A E + +S +L Y G+ + ++ + + K E DL Sbjct: 362 QAWYSATAAEAKFQASKSAQEANNESFTLMKEKYEVGKANNIEFNEAKINLMKAESDLIQ 421 Query: 431 AK 432 AK Sbjct: 422 AK 423 >gi|253568016|ref|ZP_04845427.1| outer membrane efflux protein [Bacteroides sp. 1_1_6] gi|251842089|gb|EES70169.1| outer membrane efflux protein [Bacteroides sp. 1_1_6] Length = 463 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 62/333 (18%) Query: 61 LNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI--------- 109 L + ALQQN+TI + R+NA ++ + +A LFPS S S + Sbjct: 44 LQSCIDYALQQNITIRK--NRVNAESTQIDVKTAKATLFPSLSFSTSQNMVNRPYQESSR 101 Query: 110 ---------PNLKTNSTGQ--LDSDWKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNV 156 KT+ G L++ W I G +R I+ N +A V+ ++ ++ Sbjct: 102 TISGSEVIETTSKTSYNGNYGLNASWTI-YNGSKRLNTIKQEKLNNQAANLDVETSENSI 160 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + YI + E + + L + + G+ +K L +LEA++ + Sbjct: 161 QESIAQIYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSIAKSDLAQLEAQVSTDR 220 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIPADLI 272 + T + +TL Y N N+Y+P N+ +P Sbjct: 221 YQLVTAQ----------ATLQDYKLQLKQLLELDGENEM--NVYLPALSDENVLLPLPTK 268 Query: 273 RN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFP-- 318 ++ RP+I + + S I IAK+ P++SL+ I H D +F Sbjct: 269 KDVYMSALTLRPEIEASKLSVEASELGIDIAKAGYLPTISLSAGIGTNHTSGSDFTFGEQ 328 Query: 319 ---GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+N S G + +PIF+ + KS +++A+ Sbjct: 329 VKNGWNN--SIGVSVSVPIFNNRQTKSAVQKAK 359 >gi|309782258|ref|ZP_07676986.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] gi|308918951|gb|EFP64620.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Ralstonia sp. 5_7_47FAA] Length = 168 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 8/149 (5%) Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 G ++ +N G + GP L LPIF+ GK+++N+R ++ ++ +T+ A+ Sbjct: 8 GLASIAPENLLLGASRQLGIGPALKLPIFEGGKLRANLRGKYANYDAAVASYNQTLTEAL 67 Query: 367 KEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT---A 422 + + +T+++ D +I + + A+ +++ SL+ Y G + L +L+ E Sbjct: 68 HDTADQITALHSIDAQIAIQ-RTALSEAERAYSLARTRYSAGLGTQLVVLNAETTVLQQR 126 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 K+ DL A+R A+ + L A+G GY Sbjct: 127 KLATDLQ-ARRLDAQ--MALIKALGGGYT 152 >gi|302039189|ref|YP_003799511.1| putative outer membrane efflux protein [Candidatus Nitrospira defluvii] gi|300607253|emb|CBK43586.1| putative Outer membrane efflux protein [Candidatus Nitrospira defluvii] Length = 452 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 7/177 (3%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKL 330 NR +++ Q + + + S+ PSLSLNG I L D + S G L Sbjct: 274 NRAELKAQLTRQKLASLSLSSVTSERIPSLSLNGDYGWIGLKPDEALATR----SVGLML 329 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIFD G+ + I + S +++ I ++ EV NAL +++ + V + + Sbjct: 330 SVPIFDGGQREGRISESRSRVRQELIRMKDVSDQVTLEVRNALLTLDSSTQQVAVAEKGL 389 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L K ++ + + G + ++I + + + A+ +L A + S ++L A G Sbjct: 390 SLAMKELTFARDRFAAGLATNIEITNAQTSVARARDNLIEALFRFNASRINLARAKG 446 >gi|149912000|ref|ZP_01900595.1| putative outer membrane transport protein [Moritella sp. PE36] gi|149804935|gb|EDM64968.1| putative outer membrane transport protein [Moritella sp. PE36] Length = 466 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 92/454 (20%), Positives = 185/454 (40%), Gaps = 23/454 (5%) Query: 7 IFSLFIVLLAGCTV--GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFND-TSLNK 63 I+ + V L+GC++ P + P Q+S + ++ D W+ L + Sbjct: 5 IYFILAVNLSGCSLFTPPAAIVTDRIITPAQWSTVH----LHTDIKTTWQGIAAYPQLTE 60 Query: 64 LVKIALQQNLTILQATERINAAKENILSVRADLFP---SSYASISHRFIPNLKTNSTGQL 120 ++ AL N + I+ A + A +P + S R N+ +S+ + Sbjct: 61 YIQEALAYNPQLTSERYNIDIAVALVKQTAAGQYPQIDAYLGSGRQRNNQNITNSSSVNI 120 Query: 121 DSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--NVISKLIPSYIDARHFKERISIAH 178 D+ W+ID G+ + + A LD+ A ++ +L N I+ + + D +++++ + + Sbjct: 121 DTGWEIDYLGKLNDLAKA-ATLDAQQAILNYKQLQSNTIALISQQWFDLIFYQQQLKLIN 179 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + ++N+ + + QG L + A++ ++ ++ + + LG Sbjct: 180 KRQQNLQQNLAIIENGYDQGVKQPLDVYLARADLARAQASKQENLEALKNAQRQLELSLG 239 Query: 239 -YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 YPA +N IP+ G+P++LI+ R DI+ L +I A Sbjct: 240 RYPAASI------HANGDLTFAAIPVPSGLPSELIQRRFDIQQVMLALNAENFRIAHAYK 293 Query: 298 DLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + +PSLSL+ S + N + WS +FD G + + + + Q+ Sbjct: 294 NRFPSLSLSLSGGTSSPELSNLLQSNSLVWSLFANASASLFDAGALTAKQAQQTAKTQQA 353 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 I+ L A EVE AL + + Q+A + L+ Y G + + Sbjct: 354 AISVTRVTLQAFSEVETALAAEVTLANRELQQQNAEYYFNIAEQLAFEQYIAGLTDYITV 413 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 L+ +R+ + L K ++ + L +A+G Sbjct: 414 LESQRSAFDAQTSLLAIKTTRIQNRIKLLLALGG 447 >gi|149369946|ref|ZP_01889797.1| outer membrane efflux family protein, putative [unidentified eubacterium SCB49] gi|149356437|gb|EDM44993.1| outer membrane efflux family protein, putative [unidentified eubacterium SCB49] Length = 436 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/335 (20%), Positives = 145/335 (43%), Gaps = 42/335 (12%) Query: 129 FGQRRHIESSLANLDSAYA-QVDIAKLNVIS------------KLIPSYIDARHFKERIS 175 F + I+ L NLD Y + AK+ +S ++ +Y+ + + + Sbjct: 111 FATKFEIQQPLVNLDGIYQRKAAKAKMEAMSLKQTRTGDYLTLEVEKAYMQLQLAYKGVD 170 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 + + L + N +L+ F QG K ++ + +++ + T + NV N S Sbjct: 171 VLEKALQTSQANKKLTDNSFEQGYLQKSDVLNASVRVTEVQNQLQTA----KSNVQNASD 226 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA-DSVAKIGI 294 L + + + + K S+ + + I ++ NR DI+ + LA D+ + + Sbjct: 227 YLSFLMNDDAYVVYKPSDVLEKQTLV---IAANNEISENRADIKAMQ--LATDAYSAMNK 281 Query: 295 A-KSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A K YPSL+ GS L D F G + G +L +F K ++++++ Q+ Sbjct: 282 ADKMAFYPSLNAFGSYELYDDQLFQGSANGYLLGAQLKWDLFQGAKRFGKVQKSQAEFQK 341 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS--MINYRQGRYSL 411 + +++ V + E +N+ K+ + ++ + L+K +++ S + R+ R+ Sbjct: 342 SQLEYEQYVSKSTLE-------LNQAKRTLLDAENKLSLNKLALAQSEESLRIRKNRFK- 393 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 +E+ T DL +A+ Q A+ ++ Y I Sbjct: 394 ---EGLEKTT-----DLLMAETQYAQKQLEYYQTI 420 >gi|254787790|ref|YP_003075219.1| type I secretion outer membrane protein TolC [Teredinibacter turnerae T7901] gi|237683640|gb|ACR10904.1| type I secretion outer membrane protein TolC [Teredinibacter turnerae T7901] Length = 458 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 84/409 (20%), Positives = 171/409 (41%), Gaps = 66/409 (16%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 S +L ++ + AL+ + T A ++A KE+ A L PS A+ S+ + T Sbjct: 20 SIQAATLEEIYQQALESDHTYKAAQANLDAGKESSKIGLAGLLPSVNATASY---TDKTT 76 Query: 115 NSTGQLDSDWKID-------LFGQRRHIESSLANLDSAY-------------AQVDIAKL 154 +S+G+LD +D G + ++ L N++S Y + DIA+ Sbjct: 77 DSSGKLDDGTDLDESSVDGTTSGYQVTLKQPLFNMNSWYRYQNGRATSDIAEERFDIAEE 136 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++I + +Y DA + +S A + +E + +F G T+ + + +A S Sbjct: 137 SLILRTATAYFDALQAVDNLSTAKAEENALSHQLEQTRQRFEVGLTAITEVHEAQAVFDS 196 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD---- 270 ++ E ++ + L G P + L ++K +P+ +PA+ Sbjct: 197 ATAERLLAEGQLGISFEALEVLTGRPQSS-LAPLKKD---------LPVASPVPAERTAW 246 Query: 271 ---LIRNRPDIRYQEKKLADSVAKIG--IAKSDLYPSLSLNGSIALTHDNSFPGYNTHW- 324 ++N + Q +KL AK A ++ P+++ + D + GY+ ++ Sbjct: 247 VEMALKNNNTL--QVEKLNADAAKFNKKAATANHLPTVTFEAGYS---DYTNEGYSQNFG 301 Query: 325 ----------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE----TVLNAIKEVE 370 S G L +PIF+ G ++ R+A +QYI +E T + I++ Sbjct: 302 QDGEFDTQEQSIGVVLSVPIFNGGGTSASRRQAA----KQYIAAREVMSQTQRDVIQQTR 357 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + ++ + V A+ ++ ++ + Y G L+D+L+ +R Sbjct: 358 SRHLTVLTNVATVKARSQAIVSNQSALEATQAGYDVGTRDLVDVLNAQR 406 >gi|298505076|gb|ADI83799.1| efflux pump, RND family, outer membrane protein [Geobacter sulfurreducens KN400] Length = 424 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%) Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 D SFP W G +L +PIF + R ++ +E ++ L +EVE A Sbjct: 284 DRSFPPEGNTWGVGVRLTVPIFAGFATREKEREVAAALREVEARRRDQQLQVGREVEGAW 343 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + E V +E ++S +L++ YR+G +++++ D + Sbjct: 344 LGMREALARVESTGRELEAARESRTLAIERYREGVGTIIEVTDAQ 388 >gi|289679872|ref|ZP_06500762.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 163 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 13/164 (7%) Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWS-FGPKLYLPIFDKGKIKSNIRRAESSAQE 353 A++ + P L+L+ + + + +S L PIF+ G++ + +A + +E Sbjct: 4 ARAAMLPKLTLSARLGTENTRAEDWLRAPFSSLAAGLVGPIFNNGRLAAERDKATARQEE 63 Query: 354 QYITWQETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKK--SMSLSMINYRQGRYS 410 T++ ++N+ +VE AL SI+ D++ + H EL + + ++ Y++G Sbjct: 64 LLETYRGAIINSFADVEKALNSIHGLDQQ---RYWHEEELKQAQTAFRIAQSRYQEGAED 120 Query: 411 LLDILDIERA---TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 LL +L+ +R V V L +A+ Q + + LY A+G G+ Sbjct: 121 LLTVLETQRTLYLAQDVSVQLRLARLQ---ASIALYKALGGGWQ 161 >gi|260220827|emb|CBA28782.1| hypothetical protein Csp_A08860 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 262 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 12/170 (7%) Query: 4 LRAIFSLFIVL-LAGCT-VGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 LR ++ + L L+GC V P P L Q + + + ++ +WW+ D L Sbjct: 6 LRTFTAVSVALALSGCAIVMPPAKVDAAPALQWQAPLPHQGTVGSL--AQWWQKQGDPLL 63 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFP------SSYASISHRFIPNLKTN 115 +L+ A + + QA R+ +A+ + A L P S+ +S +P T Sbjct: 64 VELIDAAQAVSPNVAQALARVESARAQRTTANAALLPKLDASVSASRGVSQPDVPVATTQ 123 Query: 116 STGQLDSDWKIDLFGQRRHIESSL-ANLDSAYAQVDIAKLNVISKLIPSY 164 S G L + W++DL G R + ++ A AQ A+++V +++ +Y Sbjct: 124 SLG-LQASWELDLVGANRAVSNAADAQFQGTQAQWHDARVSVAAEVATTY 172 >gi|110834242|ref|YP_693101.1| cobalt/zinc/cadmium efflux RND transporter outermembrane protein [Alcanivorax borkumensis SK2] gi|110647353|emb|CAL16829.1| cobalt/zinc/cadmium efflux RND transporter,outermembrane pr [Alcanivorax borkumensis SK2] Length = 432 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 32/286 (11%) Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL-- 208 IA+L+V+ + + YI F+E +++A + L L +K + + + GA SK L ++ Sbjct: 133 IARLDVLGEAVTRYIALARFEEELALAERTLALAEKAKQAARRRVNAGAASKADLTRMTL 192 Query: 209 ---EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI 265 A+I +D+ S ++ L G + LH + + +P +P Sbjct: 193 ASRHADIARRRADMERGRAS-----QQLAALWGQQGADQLH----PATSLRPLPKLP--- 240 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL---YPSLSLNGSIALTHDNSFPGYNT 322 P + I ++ + Q +LA S ++ A+S L S + S+ HD N Sbjct: 241 --PREQILDQLEQAPQLLQLA-SETRLHAAQSRLANARGSRDVTVSVGARHDRV--DNNN 295 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN---ED 379 G +P+ K + NI RAES Q + + ++ S+N E+ Sbjct: 296 TLVLG--FSVPLGLKNPNRGNIARAESQLAASEAQLQARRIELVATLDTLYRSLNLLREE 353 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 ++ + A+ L ++ + YR GRYSLL+++D ++ +E Sbjct: 354 LALID--ESALPLARQLYADIQKGYRSGRYSLLELIDAQQEQLNLE 397 >gi|256829124|ref|YP_003157852.1| TolC family type I secretion outer membrane protein [Desulfomicrobium baculatum DSM 4028] gi|256578300|gb|ACU89436.1| type I secretion outer membrane protein, TolC family [Desulfomicrobium baculatum DSM 4028] Length = 456 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 31/314 (9%) Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 +A +I+++ Y A K+R+ A +K+ EL+ + G L +A Sbjct: 143 LAGQELITRVSDLYFQALAAKDRLDYALVEQAAVEKHFELAQGRSDMGLIPITDLYDAKA 202 Query: 211 EIKSIESDIPTLEKSFRMN--VHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-----PI 263 + + E+ T+E R++ + +S + G P + + PN+ + P Sbjct: 203 RLAATEA--LTIEAHNRLDDALQALSEVTGAPVDDLIP--------LAPNIKLKRPEPPT 252 Query: 264 NIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDL--YPSLSLNGSI--ALTHDNSFPG 319 A + P I +K A VA++ + + + YP+L L S T D+ F G Sbjct: 253 LDSWLAGALEGNPAIELSKK--AVEVAELEVKRQNAAHYPTLDLVSSFDNENTEDSLFGG 310 Query: 320 YNT--HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV---LNAIKEVENALT 374 + + G + LP++ G++ S R S+ E I Q+ V + ++ +A Sbjct: 311 SSEVDTYKIGVQFNLPLYQGGEVASKTR---SARHEVGIARQDLVKQSRSVARKTRSAFL 367 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 ++ K V L +++ +K ++ Y G ++ L +LD ER A V +D + A+ Sbjct: 368 GVDSSLKRVDALAQSLDANKLALEAKQDGYMSGLFTSLGVLDAERDLALVSIDHAQARYD 427 Query: 435 LAKSYVDLYIAIGS 448 + + L A+GS Sbjct: 428 YILNSLRLKQAVGS 441 >gi|148260776|ref|YP_001234903.1| TolC family type I secretion outer membrane protein [Acidiphilium cryptum JF-5] gi|146402457|gb|ABQ30984.1| type I secretion outer membrane protein, TolC family [Acidiphilium cryptum JF-5] Length = 517 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 121/293 (41%), Gaps = 39/293 (13%) Query: 144 SAYAQVDIAKLNVISKLIPSYIDA---RHFKERISIAHQILDLYKKNIELSHLK-----F 195 +A AQ+ + V +K++ +Y+ RH + LD+ +N+ L+ F Sbjct: 150 AARAQLLATEQTVFAKVVNAYVTVITDRHLLD--------LDINNENVLAQQLRAVKDQF 201 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNN 254 G ++ S+ + EA + + + + + + + L+G YPA + Sbjct: 202 NVGEITETSVAQAEASLAGAQEQVAVAKGNLHIADESFRQLVGSYPARTLVPP------- 254 Query: 255 FQPNLYIPINIGIPAD--LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 QP L +P+ P +RN PD+ +A + A + L P LSL+ S Sbjct: 255 -QP-LELPVRGKTPLAHAALRNNPDVVAALFTMASKKDSVDAAVAGLGPQLSLSAS---A 309 Query: 313 HDNSFPGYNTHWSFGPK----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 D S PG S G + L +P++ GK + IR+A + Q Y + A+++ Sbjct: 310 FDESNPGGPHSRSTGGQILANLTIPLYQGGKEYAAIRQARDNVQYAYSAVIDAQRTAVQQ 369 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ--GRYSLLDILDIER 419 A + K + + ++ +++L ++ G LD+L+ ++ Sbjct: 370 ATQAWEGLKASKAAIVSTR--AQIKADAIALDGTERQEIVGTRDTLDVLNAQQ 420 >gi|330943395|gb|EGH45756.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 104 Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 7/65 (10%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIA 68 LL+GC VGP+Y +P PL P ++ + + NI + WW+ F+D L+ V A Sbjct: 15 LLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPLVSAAWWDGFDDPLLSSFVSRA 72 Query: 69 LQQNL 73 L QNL Sbjct: 73 LAQNL 77 >gi|294673957|ref|YP_003574573.1| outer membrane efflux protein [Prevotella ruminicola 23] gi|294473965|gb|ADE83354.1| outer membrane efflux protein [Prevotella ruminicola 23] Length = 485 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/326 (18%), Positives = 135/326 (41%), Gaps = 36/326 (11%) Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 RRH ++L +D AY QV + H K ++A L+L KK Sbjct: 185 RRH--ATLYQIDQAYWQV---------------VSLHHKK---ALAESYLELVKKFDSDV 224 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 H +G ++ + ++ ++ E + + ++ ++ L G P E + +Q Sbjct: 225 HKMIDEGVATRSDGLSVDVKVNEAEMTLTKVNDGLVLSRMLLNQLCGLPLNESVILQDEQ 284 Query: 252 SNN-----FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 ++N P L + + + +RP+++ + + S + K+ P ++L Sbjct: 285 ADNIAVVELTPQLDVE-------NAVAHRPELKMLQNTVDLSKQATNVLKAANLPQVALM 337 Query: 307 GSIALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 G A+++ N G+ W G + +PI++ G + +R ++ + + E Sbjct: 338 GGYAVSNPNVLNGFEKKFAGFWHLGVIVRVPIWNWGDVMYKVRASKGATAIATLELDEAR 397 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 +V ++E K +T Q ++ +++ + + +++G S +++ + A Sbjct: 398 EKIELQVNQTTFKVDEANKKLTMAQKNIQRADENLRTANLGFQEGVISPTVVMEAQTAWL 457 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + A+ + S VDL A+G+ Sbjct: 458 QAQSQKIDAEIDVKLSQVDLQKALGT 483 >gi|262384242|ref|ZP_06077377.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] gi|262293945|gb|EEY81878.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] Length = 463 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 18/266 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K+ QG ++ L++ + +K+ E ++ E S + + LLG + Q Sbjct: 203 KYEQGTVAEYDLIRADVTVKNTEPNLLQAENSLTLAKWQLKALLGMDLDLNID-CDGQLT 261 Query: 254 NFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 +F+ +L Y+ + + + + D++ ++ K + + K D P+LSL G Sbjct: 262 DFKSSLFADYLSTDTTLSENTDLKQLDLQAEQLK-----KTLAMQKFDYLPTLSLTGLYQ 316 Query: 310 --ALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 A+ +D F Y N + G L +PIF G +++ + S + + +T N Sbjct: 317 WSAMNNDFKFKNYRWNPYSMIGITLSVPIFSGGSKFYKVKQTKVSIDQLNLQRDDTKRNL 376 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK 423 V+ + ++N K Q VE ++ +S Y G + L++ D E A A+ Sbjct: 377 QLAVKQYIDNMNTCIKKFDAAQKGVEQAERGYMISQKRYDTGAGTWLEMNDAELALTQAR 436 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + SI +AK+ DL +G+G Sbjct: 437 LNFNQSIYDYMVAKA--DLEKVLGNG 460 >gi|167819131|ref|ZP_02450811.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 91] Length = 281 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHI 135 L+ + ++S ++IDLFG+ R + Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRMRSL 163 >gi|317406922|gb|EFV86986.1| hypothetical protein HMPREF0005_05912 [Achromobacter xylosoxidans C54] Length = 154 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 GP + LPIF G++ +N+ + A + +TVL+A+ +V +AL + ++ Sbjct: 13 GIGPAITLPIFHGGELNANLASRRADADLAVSDYNQTVLDAVHQVADALDGLRLLEQERA 72 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT---AKVEVDLSIAKRQLAKSYVD 441 + + A E + + L++ Y+ G + L +L + A+++ DL I QL + Sbjct: 73 QQRQAREAIEAAYELAVNRYKAGMGNYLTVLIAQTGVLTQARLDTDLRIRAYQLD---AN 129 Query: 442 LYIAIGSGY 450 L A+G GY Sbjct: 130 LANALGGGY 138 >gi|260222921|emb|CBA32971.1| hypothetical protein Csp_B16700 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 383 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 40/201 (19%) Query: 51 KWWESFNDTSLNKLVKIALQQ--NLTILQA-TERINAAKENI-----------------L 90 +WW+++ D LN+LV AL NL + QA +R+ A +N L Sbjct: 39 QWWKAYGDEQLNQLVAQALANNPNLRVAQARVQRVQAGIDNANAASAPQLNAGLDATHQL 98 Query: 91 SVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQ-- 148 R L P+ A S R I L+ +TG W++DLFG+ R A LD+A Q Sbjct: 99 YTRNGLVPAPIAG-SEREIATLQ--ATG----SWELDLFGKNR------AALDAAIGQSR 145 Query: 149 -----VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKL 203 A++ + S + SY + ++ +A + L ++ +L + G ++L Sbjct: 146 AAQADAQAARMMLASNVARSYFQWLRVQGQLEVAQRTLAQRQQTQQLVKDRLQAGLDTQL 205 Query: 204 SLVKLEAEIKSIESDIPTLEK 224 L + E+ + I L++ Sbjct: 206 ELQQSESALPDARFQIEALKE 226 >gi|84625995|ref|YP_453367.1| hypothetical protein XOO_4338 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369935|dbj|BAE71093.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 207 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 58/110 (52%) Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + +R E+ A + TVL A++EV+ L+ +D + L+ A + + ++S + Sbjct: 86 ARVRATEAGADAALAQFDHTVLQALREVQTTLSRYAQDLDRLHLLEQAQQQAELALSQNR 145 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ GR L LD ER A ++ L+ A+ Q+++ + L++ + G++ Sbjct: 146 RLYQSGRTPYLSSLDAERTLATADMTLANAQAQVSQDQIQLFLTLDGGWD 195 >gi|124514395|gb|EAY55908.1| putative outer membrane efflux protein [Leptospirillum rubarum] Length = 474 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Query: 255 FQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + P L IP + A I +RPD++ +++ + ++ P++ G+ +L Sbjct: 267 YHPQLSIPYTPEQVVAIAISHRPDLKQLDQQTIAQKQAVRFNQAQFMPTVQTVGAYSL-- 324 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL--NAIKEVEN 371 D+ F +WS + +PIF+ +R +S AQ + + +Q L I+ V + Sbjct: 325 DSEFFPLVYNWSIATTVTIPIFNGFLNVQQVR--QSRAQLKQVRFQREDLRQGVIQSVLS 382 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 L ++ ++ + Q VE +++ LS +R G + + + ER AK DL A Sbjct: 383 DLYTLKTAEQKIRDAQTLVEQAMQNLDLSETQFRVGTGTTVAVTQTERDLAKARSDLVQA 442 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 + A S L +G Y+ Sbjct: 443 QADFAISLAQLKRDMGINYD 462 >gi|107101968|ref|ZP_01365886.1| hypothetical protein PaerPA_01003015 [Pseudomonas aeruginosa PACS2] Length = 410 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/329 (20%), Positives = 144/329 (43%), Gaps = 19/329 (5%) Query: 126 IDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ++L G+R +E + + A+ Q+++ + + +++ +Y A +ER+ +A LDL Sbjct: 86 LELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAALTAQERVRLAKTSLDLA 145 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ ++ + + G+ S + V+ + + + D+ E + +S+ P F Sbjct: 146 RRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQRTYVQLSSTWDEPQPGF 205 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKLADSVAKIGIAKSDLYP 301 +P +I A L+R+ P +R +++A A++ + K P Sbjct: 206 ARVGGALD-------AVPASITRGA-LLRHLDESPTLRLAAQEVARGEAQVDLEKRQRIP 257 Query: 302 SLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 +L++ SI +D + G + G + LP+FD+ + NI A+S A + + Sbjct: 258 NLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGNIYAAQSRADQARDLQR 313 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI-NYRQGRYSLLDILDIE 418 T+L E A + ++ + ++ + +S SM + G+++ LD+LD + Sbjct: 314 ATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTRGFEMGKFNFLDVLDAQ 373 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R V A A++ V + +G Sbjct: 374 RTLVGVRAQYVRALDAAAQARVSMERLLG 402 >gi|332286644|ref|YP_004418555.1| outer membrane export protein [Pusillimonas sp. T7-7] gi|330430597|gb|AEC21931.1| outer membrane export protein [Pusillimonas sp. T7-7] Length = 450 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 11/158 (6%) Query: 284 KLADSVA--KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-------SFGPKLYLPI 334 +LA +A +I IAKS+ YP LSL D YNT S G +L +PI Sbjct: 262 ELAAKIAEKQIDIAKSEHYPRLSLQAQTGSATDRGL--YNTEGGPRSLNSSIGLQLSIPI 319 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F G I S +R S Q+ + A++ + + + ++ LQ A + Sbjct: 320 FTGGGISSVVREQTSRLQQARYELENAKRQAVQSTQQHFSGVTSGLARISALQAAERSSQ 379 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 S+ + Y G +D+L+ ++ + + L+ A+ Sbjct: 380 ASLQANKTGYEVGVRINIDVLNAQQQLYETQRGLARAR 417 >gi|53804188|ref|YP_114207.1| outer membrane heavy metal efflux protein [Methylococcus capsulatus str. Bath] gi|53757949|gb|AAU92240.1| putative outer membrane heavy metal efflux protein [Methylococcus capsulatus str. Bath] Length = 434 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/308 (19%), Positives = 127/308 (41%), Gaps = 40/308 (12%) Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 +E++ + + A V N++ +L ++I ++R+++ + ++ L Sbjct: 122 RVEAAEKQVQTTEAAVQAEFANLVHELWRTFIKLLAGQQRVAVLEEASAKMERLAALVAG 181 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G S+ +++E E K + + + T + V + +LG P + + Sbjct: 182 REESGGASRYDTLRMEIEAKDVRAKLETARNDLQGTVEELGLMLGLP-----DWKPEARG 236 Query: 254 NFQPNLYIPINIGIPAD-------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 N P +G+PAD R P+I + + A++ AK++ +P S+ Sbjct: 237 NLAP-------LGVPADPEKSWADAERINPEIEAVRRGEIAAAARLEKAKAERWPVPSIQ 289 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDK---GKIKSNIRRAESSAQEQYITWQETVL 363 A T Y + G + +P+FD+ G ++ + + + +T Q V Sbjct: 290 FGSAFTEQP----YGHAFFGGVSVEIPLFDRNQGGMARAAAEKQAAILDRELVTSQIHV- 344 Query: 364 NAIKEVENAL-----TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 A+ L T + ++ +V KL E+ + + YR G+ SLL++LD Sbjct: 345 -ALDRATGLLARRRETRVKFERDVVAKLSALEEMGEAA-------YRLGKGSLLELLDST 396 Query: 419 RATAKVEV 426 R+ ++ + Sbjct: 397 RSRTEIRL 404 >gi|289522129|ref|ZP_06438983.1| putative outer membrane efflux protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503965|gb|EFD25129.1| putative outer membrane efflux protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 456 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 73/403 (18%), Positives = 171/403 (42%), Gaps = 26/403 (6%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L+ L+ IA + N + A E++N + L + L P +S+++ + G Sbjct: 43 NLDNLISIAEEHNPVLKAAQEQLNQVRAQELQSASQLAPRLDSSLTY-----MHQYGGGM 97 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN--------------VISKLIPSYI 165 DS ++ D + + +L + D A + A LN + + + +Y Sbjct: 98 TDSKYR-DTYKAALTLTHTLYSGDGLEASLRAATLNRQALEADVLRTKQTIRNDVQNAYY 156 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D + + ++ +A + DL ++++ + + QG + +++ + ++ S E ++ + Sbjct: 157 DLQRARAQLQVAQESYDLALEHLKQAQSLYNQGVVAINEVLRTQVDVSSAELNLIQAKNG 216 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ + + +G P + H M + + +L I I + ++ RP++ E Sbjct: 217 TQVALSALEKAVGIPLS---HDMVPEVAPKEESLLILPQIDPYSIALQYRPELVSLEDSR 273 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 + A P++ L G ++ D FP + W+ ++D+G++K+ I Sbjct: 274 KAAEELAKAAAGQARPNIYLQGEVSYYEDEFFPNED-DWNVSIIASWRLYDRGEVKNKIE 332 Query: 346 RAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ A+E + + + N I+ EV A ++ + V + V + ++ +++ Y Sbjct: 333 ENKAMARE-LLARIDDLRNQIRLEVSTAWQNLESALQSVRVAEDQVTIAEEDYRMALRRY 391 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + +D+LD A + A +Y DL A+G Sbjct: 392 VEQVGTNIDVLDARTALTDANTNFVNAIYDAYSAYSDLIYAMG 434 >gi|265750441|ref|ZP_06086504.1| outer membrane efflux protein [Bacteroides sp. 3_1_33FAA] gi|263237337|gb|EEZ22787.1| outer membrane efflux protein [Bacteroides sp. 3_1_33FAA] Length = 447 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 50/327 (15%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYAS---ISHR-------- 107 +L+ + AL++N+ + Q + + ++ + +A LFPS S+++ +++R Sbjct: 27 TLDDCIDYALEKNIQLQQDKISLEESSVDVKTAKAALFPSLSFSTGQNVTNRPYQETSNT 86 Query: 108 ------FIPNLKTNSTGQ--LDSDW-------KIDLFGQRRHIESSLANLDSAYAQVDIA 152 + KT G L++ W +++ QRR + +A L A + + + Sbjct: 87 VSGTEIISSDSKTTYNGNYGLNAQWTLWNGNKRLNTIKQRRTSQQ-IAGL--AVTETENS 143 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 I+++ +I + E + I L + + + F +G+ SK L +LE+++ Sbjct: 144 LQEQIAQI---FIQILYADESVKINRNTLQVSQATYDRGKELFQEGSISKADLAQLESQV 200 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPA 269 S + + T E S R + LL TE + + + + QP +P + Sbjct: 201 SSDKYQLVTSESSLRDYKLQLKQLLELDGTEEMDLVLPELADEHVLQP---LPAQEDVYQ 257 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GY 320 + +RP+I+ + + +S I +AK+ P++SL+ S ++T+ DNS+ G+ Sbjct: 258 QALASRPEIQSSKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGW 317 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N G + +PIFD + KS +++A Sbjct: 318 NNM--IGVNINIPIFDNRQNKSAVQKA 342 >gi|29346622|ref|NP_810125.1| outer membrane efflux protein [Bacteroides thetaiotaomicron VPI-5482] gi|29338519|gb|AAO76319.1| outer membrane efflux protein [Bacteroides thetaiotaomicron VPI-5482] Length = 463 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 134/338 (39%), Gaps = 72/338 (21%) Query: 61 LNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI--------- 109 L + ALQQN+TI + R+NA ++ + +A LFPS S S + Sbjct: 44 LQSCIDYALQQNITIRK--NRVNAESTQIDVKTAKAALFPSLSFSTSQNMVNRPYQESSR 101 Query: 110 ---------PNLKTNSTGQ--LDSDWKIDLFGQRR-------HIESSLANLDSAYAQVDI 151 KT+ G L++ W I G +R + + ANLD V+ Sbjct: 102 TISGSEVIETTSKTSYNGNYGLNASWTI-YNGSKRLNTIKQEKLNNQAANLD-----VET 155 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 ++ ++ + YI + E + + L + + G+ +K L +LEA+ Sbjct: 156 SENSIQESIAQIYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSIAKSDLAQLEAQ 215 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGI 267 + + + T + +TL Y N N+Y+P N+ + Sbjct: 216 VSTDRYQLVTAQ----------ATLQDYKLQLKQLLELDGENEM--NVYLPALSDENVLL 263 Query: 268 PADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DN 315 P ++ RP+I + + S I IAK+ P++SL+ I H D Sbjct: 264 PLPTKKDVYMSALTLRPEIEASKLSVEASELGIDIAKAGYLPTISLSAGIGTNHTSGSDF 323 Query: 316 SFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +F G+N S G + +PIF+ + KS +++A+ Sbjct: 324 TFGEQVKNGWNN--SIGVSVSVPIFNNRQTKSAVQKAK 359 >gi|317402024|gb|EFV82622.1| outer membrane protein [Achromobacter xylosoxidans C54] Length = 131 Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLK--WWESFNDTSLNKLVKIALQQNLT 74 GC VGP+Y KP P + + L + D ++ WW+ D L++L+ +ALQ+N Sbjct: 25 GCAVGPDYQKPQAA--PVALA-SPEQALFSTDRVQQDWWKQLQDPQLDRLITLALQRNHD 81 Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG 118 I A R+ ++ + D FP+ ++ RF +L + G Sbjct: 82 IRIAQARLAESRAVLDEKELDQFPT--VTLGGRFERSLSQANPG 123 >gi|326403975|ref|YP_004284057.1| putative outer membrane protein TolC [Acidiphilium multivorum AIU301] gi|325050837|dbj|BAJ81175.1| putative outer membrane protein TolC [Acidiphilium multivorum AIU301] Length = 492 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 121/293 (41%), Gaps = 39/293 (13%) Query: 144 SAYAQVDIAKLNVISKLIPSYIDA---RHFKERISIAHQILDLYKKNIELSHLK-----F 195 +A AQ+ + V +K++ +Y+ RH + LD+ +N+ L+ F Sbjct: 125 AARAQLLATEQTVFAKVVNAYVTVITDRHLLD--------LDINNENVLAQQLRAVKDQF 176 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNN 254 G ++ S+ + EA + + + + + + + L+G YPA + Sbjct: 177 NVGEITETSVAQAEASLAGAQEQVAVAKGNLHIADESFRQLVGSYPARTLVPP------- 229 Query: 255 FQPNLYIPINIGIPAD--LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 QP L +P+ P +RN PD+ +A + A + L P LSL+ S Sbjct: 230 -QP-LELPVRGKTPLAHAALRNNPDVVAALFTMASKKDSVDAAVAGLGPQLSLSAS---A 284 Query: 313 HDNSFPGYNTHWSFGPK----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 D S PG S G + L +P++ GK + IR+A + Q Y + A+++ Sbjct: 285 FDESNPGGPHSRSTGGQILANLTIPLYQGGKEYAAIRQARDNVQYAYSAVIDAQRTAVQQ 344 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ--GRYSLLDILDIER 419 A + K + + ++ +++L ++ G LD+L+ ++ Sbjct: 345 ATQAWEGLKASKAAIVSTR--AQIKADAIALDGTERQEIVGTRDTLDVLNAQQ 395 >gi|265752066|ref|ZP_06087859.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263236858|gb|EEZ22328.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 471 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 153/343 (44%), Gaps = 38/343 (11%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ + VI K +Y + A+ K Sbjct: 150 GKIRAAYKMSLLGKE------MAQMNET-----LTATEVILKTDQAYALVVKAKEMKTVA 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L +KN+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 199 DTYHAVLAELQKNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 255 Query: 235 TLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P TE L S +F P + + + + D+ R RP+ +K++A + ++ Sbjct: 256 HLIGKPLTTEILI-----SGDF-PEIEQEMELQV-LDITR-RPEYGILDKQVAIARQQVK 307 Query: 294 IAKSDLYPSLSLNGSIALTH-----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + +S+L P + + GS H + +F N +S + +P+F G+ + +R A+ Sbjct: 308 LNRSELLPKVGIKGSYDYVHGLELNEKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAK 366 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + Q + E+ A +++E K ++ +++ +S Y G Sbjct: 367 AKLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLRQAEENRRVSKSQYEVGL 426 Query: 409 YSLLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L D L+ + + + +VD A+ QL +YV A G+ Sbjct: 427 ETLSDHLEAQALWQQAYETQVD---ARFQLYLNYVAYLKAAGT 466 >gi|298387652|ref|ZP_06997203.1| outer membrane efflux protein [Bacteroides sp. 1_1_14] gi|298259508|gb|EFI02381.1| outer membrane efflux protein [Bacteroides sp. 1_1_14] Length = 463 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 76/338 (22%), Positives = 134/338 (39%), Gaps = 72/338 (21%) Query: 61 LNKLVKIALQQNLTILQATERINAAKE--NILSVRADLFPSSYASISHRFI--------- 109 L + ALQQN+TI + R+NA ++ + +A LFPS S S + Sbjct: 44 LQSCIDYALQQNITIRK--NRVNAESTQIDVKTAKAALFPSLSFSTSQNMVNRPYQESSR 101 Query: 110 ---------PNLKTNSTGQ--LDSDWKIDLFGQRR-------HIESSLANLDSAYAQVDI 151 KT+ G L++ W I G +R + + ANLD V+ Sbjct: 102 TISGSEVIETTSKTSYNGNYGLNASWTI-YNGSKRLNTIKQEKLNNQAANLD-----VET 155 Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 ++ ++ + YI + E + + L + + G+ +K L +LEA+ Sbjct: 156 SENSIQESIAQIYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSIAKSDLAQLEAQ 215 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGI 267 + + + T + +TL Y N N+Y+P N+ + Sbjct: 216 VSTDRYQLVTAQ----------ATLQDYKLQLKQLLELDGENEM--NVYLPALSDENVLL 263 Query: 268 PADLIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DN 315 P ++ RP+I + + S I IAK+ P++SL+ I H D Sbjct: 264 PLPTKKDVYMSALTLRPEIEASKLSVEASELGIDIAKAGYLPTISLSAGIGTNHTSGSDF 323 Query: 316 SFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 +F G+N S G + +PIF+ + KS +++A+ Sbjct: 324 TFGEQVKNGWNN--SIGVSVSVPIFNNRQTKSAVQKAK 359 >gi|268315644|ref|YP_003289363.1| outer membrane efflux protein [Rhodothermus marinus DSM 4252] gi|262333178|gb|ACY46975.1| outer membrane efflux protein [Rhodothermus marinus DSM 4252] Length = 436 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/321 (21%), Positives = 135/321 (42%), Gaps = 44/321 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFIPNLKTNST 117 + + +++AL++N I QA ++ + S R++ P SIS + N + Sbjct: 17 TFEEALRLALRRNPAIQQAANERERSEVGLASARSNFLPDLSLSISGSRDYGRNFVMDEG 76 Query: 118 GQLDS---------DWKIDLFGQRRHIES-SLANLDSAYAQVDIAK------LNVISKLI 161 +D ++LF R + S S A A ++++ A+ NVIS + Sbjct: 77 RVVDQTTHYFSSGISANLNLFNGFRDLNSVSQARFQVAASELNYARQRETVLFNVISTFL 136 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 S I+AR E++ I + L + +E G+ L + +A++ S E ++ Sbjct: 137 -SLIEAR---EQVRIQEENLAAQRALLEQIEAFVQVGSRPVADLYQQQAQVASAELELIN 192 Query: 222 LEKSFRMNVHNISTLLG---YPATEFL----HYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++ ++ N+ LL + A EF+ M ++ + + + Sbjct: 193 ARRNQQLQEANLIQLLQLDPFGAYEFVIPEVDTMALGVREYEAQVLLQAAL-------ER 245 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA--------LTHDNSFPGYNTHWSF 326 R D+R E+++ + + +A+S +P++SL S L+ + F N S Sbjct: 246 RSDLRALEQQIEAAEYGVRVARSSYWPTISLRASYGSSYTDLAPLSFQDQFFDRNRRGSI 305 Query: 327 GPKLYLPIFDKGKIKSNIRRA 347 G L PIFD+ + N++RA Sbjct: 306 GLSLSFPIFDRFTTRHNVQRA 326 >gi|88813423|ref|ZP_01128659.1| Type I secretion outer membrane protein, TolC [Nitrococcus mobilis Nb-231] gi|88789294|gb|EAR20425.1| Type I secretion outer membrane protein, TolC [Nitrococcus mobilis Nb-231] Length = 442 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%) Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I + + P++ L + TH ++ F G + S G + LPIF + S + A+ Sbjct: 269 IQVQRGGHLPTIGLTANA--THQDTGGVFGGTSDRQSIGVRGELPIFQGFAVSSRVSEAQ 326 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + +ET +E NA ++ + V LQ AV ++ ++ + Y G Sbjct: 327 ARYTQSREQLEETRRRVGRETSNAYRAVQTSIRQVQALQQAVVSNRSALKATQAGYEAGT 386 Query: 409 YSLLDILDIE 418 +++D+LD + Sbjct: 387 RTIVDVLDAQ 396 >gi|152986592|ref|YP_001346331.1| secretion protein [Pseudomonas aeruginosa PA7] gi|150961750|gb|ABR83775.1| probable secretion protein [Pseudomonas aeruginosa PA7] Length = 472 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 73/318 (22%), Positives = 150/318 (47%), Gaps = 27/318 (8%) Query: 124 WKIDLFGQRRHIESSLAN----LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 W + FG+R ++L N L +A A D N + +Y DA + ++ + Q Sbjct: 136 WVLFDFGRR---SAALRNAQQLLLAANASQDATLQNTFALAAQAYYDALAAQRSLAASRQ 192 Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL--EKSFRMNVHNISTLL 237 + +L +N+E + K+ GA + LS +L+A+ ++ + + E + + I+ + Sbjct: 193 VAELAAQNLEAADAKYKAGAAA-LS-DRLQAQTALSQASLAQVRDEGALSNALGVIALRM 250 Query: 238 GYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 G LH + QP+ ++ + A+ R P + + +L + A + ++ Sbjct: 251 GLAPDTPLHLSGEL--EAQPDTGFVKAIDAMLAEARREHPAMLAAQARLKAAAASVEESR 308 Query: 297 SDLYPSLSLNGSIALTH-DNSF-PGYNTHW---SFGPKLYLPIFDKG----KIKSNIRRA 347 + PSL+L+ ++A ++ D S G +T S G +L +P+F+ ++++ + R Sbjct: 309 AAGRPSLALSANLARSYTDQSLAAGGDTRGRDRSIGLQLNIPLFEGFERTYQVRNALARR 368 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 E+S E T Q+ L EV N S++ + + + + + VE ++S+ + YR G Sbjct: 369 EASEAELADTEQQVSL----EVWNNYQSLSVETRSLARTRELVEQSRQSLEVVQGRYRSG 424 Query: 408 RYSLLDILDIERATAKVE 425 S++++L+ A A E Sbjct: 425 VGSMIELLNALTAYASAE 442 >gi|325525261|gb|EGD03121.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 292 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RF 108 WW +F D LN L N T+ +A + A+ + A P+ A ++ R Sbjct: 81 WWTAFGDPDLNALEARVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTVTAGVAQTRTRV 140 Query: 109 IPN-LKTNSTGQLDSD--------WKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVIS 158 N L ++ GQ SD W+ DLFG+ R + + AN D++ A + KL+V + Sbjct: 141 SQNKLGSSLAGQSTSDYQTGVAASWEPDLFGRVRDAVSGAQANADASAADLQSVKLSVTA 200 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 L Y R + + + Y ++L + GA ++ + ++++ + Sbjct: 201 DLATDYFALRSLDTQKRLLDDSVRAYADALQLLQRQRAAGAIDASAVAQAATQLEATRTQ 260 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEF 244 ++ S H I+TL+G A+ F Sbjct: 261 DTDIDVSRAQLQHAIATLVGENASTF 286 >gi|167587392|ref|ZP_02379780.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 257 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 15/202 (7%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS--HRFI 109 WW ++ D L+ + A N T+ A R+ A+ R+ P ++S + Sbjct: 36 WWRAYRDPQLDAWIAAAQAGNPTLAAAQARVREAQAMARVARSAELPQINGNLSLMRQHW 95 Query: 110 P-----------NLKT-NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNV 156 P N T N+TG L + +DL+G+ ++ E +L ++ A A+L + Sbjct: 96 PDNVFYGPGPLANADTWNNTGTLGLSYHLDLWGKDKNATERALDVAHASAADARAARLEL 155 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 ++ +Y+ + +AH + + +L+ + G ++L + + E+ + E Sbjct: 156 EVNVVRAYVGLSMNYALLDLAHDTFERQRALADLARKRLQAGLGTQLEVSQAESTLPDYE 215 Query: 217 SDIPTLEKSFRMNVHNISTLLG 238 I T E++ ++ H ++ L G Sbjct: 216 RQIDTYEEAIQLARHQLAALAG 237 >gi|251770919|gb|EES51504.1| outer membrane efflux protein [Leptospirillum ferrodiazotrophum] Length = 456 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/332 (20%), Positives = 130/332 (39%), Gaps = 24/332 (7%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 Q RH + L+ AQ VI + +Y D + R+ A Q + ++ Sbjct: 136 QSRHQLGAAEALNRREAQ------TVIRDVETAYYDLLKAQHRVLSARQSVVDASSHLAE 189 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + + + G +L + + + ++S D+ E R ++ +G+ + Sbjct: 190 ARARLSAGVGLRLDVTQAKVNLESARLDLIHEETLRRKAQVDLGRAIGFRKKRPFVALTP 249 Query: 251 QSNNFQPNLYIPINIGIPAD-LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 +P P G D LI + P+I + + A + AK YP+++ N Sbjct: 250 A----EPERIPPFPDGPALDRLIASHPEILADTENVRQKKAALDAAKDQNYPTITGNAQY 305 Query: 310 ALTH---------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L N F N G L +PIF G + S I A + + ++ Sbjct: 306 YLAQISVPLFGLPTNPFSTVNV----GGVLNIPIFSGGLMTSQIHEARADMRRTIHQAED 361 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 L + + +A + E+++ + + + A+E +++ YR G +D +D E A Sbjct: 362 DRLRILALIRDAALDVEENRERLRETETALENAEENDRQVEAAYRAGTAHSVDAIDAETA 421 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + VD+ A+ L S V + A+G+ +P Sbjct: 422 LRRARVDVDSARFDLMSSIVAYHYALGTLTSP 453 >gi|237712356|ref|ZP_04542837.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229453677|gb|EEO59398.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 471 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 153/343 (44%), Gaps = 38/343 (11%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ + VI K +Y + A+ K Sbjct: 150 GKIRAAYKMSLLGKE------MAQMNET-----LTATEVILKTDQAYALVVKAKEMKTVA 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L +KN+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 199 DTYHAVLAELQKNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 255 Query: 235 TLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P TE L S +F P + + + + D+ R RP+ +K++A + ++ Sbjct: 256 HLIGKPLTTEILI-----SGDF-PEIEQEMELQV-LDITR-RPEYGILDKQVAIARQQVK 307 Query: 294 IAKSDLYPSLSLNGSIALTH-----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + +S+L P + + GS H + +F N +S + +P+F G+ + +R A+ Sbjct: 308 LNRSELLPKVGIKGSYDYVHGLELNEKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAK 366 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + Q + E+ A +++E K ++ +++ +S Y G Sbjct: 367 AKLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLRQAEENRRVSKSQYEVGL 426 Query: 409 YSLLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L D L+ + + + +VD A+ QL +YV A G+ Sbjct: 427 ETLSDHLEAQALWQQAYETQVD---ARFQLYLNYVAYLKAAGT 466 >gi|303237414|ref|ZP_07323980.1| outer membrane efflux protein [Prevotella disiens FB035-09AN] gi|302482364|gb|EFL45393.1| outer membrane efflux protein [Prevotella disiens FB035-09AN] Length = 495 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/328 (21%), Positives = 146/328 (44%), Gaps = 32/328 (9%) Query: 139 LANLDSAYAQVDIA--KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 LA + AQ DIA + V+ + +Y K++ +A Q DL K + + + Sbjct: 181 LAAIGEQVAQNDIALKQQTVLFAVDNAYWLIVSLKKKERLATQYRDLIAKLNDNVNKMYE 240 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF- 255 G +K +K+ + + I ++ + + L G + + ++ Sbjct: 241 SGVATKADGLKVSVAVNTANLTIAEIKNGISLAKMALCQLCGLSMENEISLKDENTDELT 300 Query: 256 --QPNLYIPINIGIPAD----LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 P Y ++ A L++N DI Q KL ++ + P L+L Sbjct: 301 ALSPTQYNHVDTAYNARPEVRLLQNTVDITRQNTKLIQALYR---------PHLALTAGY 351 Query: 310 ALTHDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 +T+ N+F G+ WS G L++PI++ G+ K R A+ + + + V N Sbjct: 352 TITNPNTFNGFEQKFRDLWSVGLVLHVPIWNWGEGKYRTRAAQGVTRMAEMELSD-VRNK 410 Query: 366 IK-EVE-NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--T 421 I+ EVE N N +++++T ++ ++ ++++ ++ + +++G ++ D++ + A T Sbjct: 411 IRLEVEQNNFRLKNANERLLTANKN-MKSAEENLRVANLGFKEGVMTVTDVMQAQTAWLT 469 Query: 422 AKVE-VDLSIAKRQLAKSYVDLYIAIGS 448 AK +D IA R ++V L AIG+ Sbjct: 470 AKTAIIDAEIAVR---TAHVGLKKAIGA 494 >gi|167741949|ref|ZP_02414723.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 296 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 23/153 (15%) Query: 5 RAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID----------TLKWWE 54 RA+ + LAGC++ P Y +P P+ P+ + G + L W Sbjct: 12 RALPIALALGLAGCSMEPAYQRPDAPM-PSAYPNGPAYATPGAPRANPGEPAAAELGWRN 70 Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI---SHRFIPN 111 D L +LV +AL N + AT I+ A+ RA FP+ AS+ S R P Sbjct: 71 FLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPA 130 Query: 112 LKT-NSTGQLDS--------DWKIDLFGQRRHI 135 L+ + ++S ++IDLFG+ R + Sbjct: 131 LRAPGQSAAINSYDASVGLTHFEIDLFGRVRSL 163 >gi|91202478|emb|CAJ72117.1| hypothetical protein kustd1372 [Candidatus Kuenenia stuttgartiensis] Length = 555 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/279 (19%), Positives = 125/279 (44%), Gaps = 26/279 (9%) Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 DL +KN ++ G + + +++ E+ + S I + E + R + +L Sbjct: 270 DLLRKN----KIEVESGTLAPIEIIEAESGVASRVEAIISAENAIRDKEDELKRILNLAD 325 Query: 242 TEFLHYMQ---KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 +E + ++ F+P +P+ I + RP+++ + ++ ++ ++ K++ Sbjct: 326 SEIISDVEIVPVDKPTFEPK-EVPLKETIKIAM-EKRPELKELQIEVENAGMEVRRKKNE 383 Query: 299 LYPSL---------SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 L+P L L G+I HD++F G +PI ++ +++ ++A+ Sbjct: 384 LFPKLDLTGGVRYSGLGGTIDGAHDSTFSGDFQGEFITLTFEVPIGNRAA-RNDYKKAKL 442 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 ++ + ++ L+ + EV ++ + + + V + A EL +K + + Y GR Sbjct: 443 GKEQSALNVKKKELDIVVEVRGSVREVMTNIERVMATRKARELAQKRLEVEEKKYSVGRS 502 Query: 410 SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L+IL + + DL+ A+ K+ D I+ GS Sbjct: 503 TSLEIL-------RAQEDLATAEGNETKALTDYEISRGS 534 >gi|289627650|ref|ZP_06460604.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 146 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 10/131 (7%) Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S L PIF+ G++ + RA + +E T++ ++N+ +VE AL SI + Sbjct: 18 SLAAGLVGPIFNNGRLAAERDRATARQEELLETYRGAIINSFADVEKALNSIQGLDQ--Q 75 Query: 385 KLQHAVELH--KKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVDLSIAKRQLAKSY 439 + H EL + + +++ Y +G LL +L +R V V L +A+ Q + Sbjct: 76 RYWHEEELKQAQTAFNIAQSRYEEGAEDLLTVLKTQRTLYQAQDVSVQLRLARLQAS--- 132 Query: 440 VDLYIAIGSGY 450 + LY A+G G+ Sbjct: 133 IALYKALGGGW 143 >gi|134094218|ref|YP_001099293.1| hypothetical protein HEAR0984 [Herminiimonas arsenicoxydans] gi|133738121|emb|CAL61166.1| putative RND efflux system outer membrane lipoprotein NodT [Herminiimonas arsenicoxydans] Length = 501 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 71/382 (18%), Positives = 160/382 (41%), Gaps = 47/382 (12%) Query: 97 FPSSYASISHRFI------PNLKTNSTGQLDSDWKIDLFGQRRH---IESSLANLDSAYA 147 F S+Y S +I + +++++ L+ + D +G RH + S+L+ +A A Sbjct: 116 FKSTYQRFSENYIIPPPYAGSYQSDNSLTLNFSYDFDFWG--RHAAELRSALSQDKAAQA 173 Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 + A+L + + + ++I ++ + Q L++ K L+ L+F G +K + Sbjct: 174 EQYNARLVIATSVAHAWIQLARLYAQLDLNQQQLEVSSKMAHLTQLRFKAGLDAKSENQQ 233 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI 267 ++ S+ ++ L++ + + ++ LLG Q + + P + Sbjct: 234 TRQQVASLGAEREQLQEQIALTRNQLAALLG------------QGPDRGRQIERPT---L 278 Query: 268 PADLIR------------NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL---NGSIALT 312 PAD+ RPDI ++ + I A++ YP+++L G ++ Sbjct: 279 PADVATALPDALPLALLGRRPDIVAARWQVEAADGGIAAARTAFYPNVNLMAFAGFSSIG 338 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 N + GP + +PI + +++N++ + T+ + +A+ +V + Sbjct: 339 LSNLLQSGSRVVGIGPAVSVPILEGRTLRANLKGRVAEYDGMVATYNRALTDALHDVADQ 398 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER---ATAKVEVDLS 429 + S+ + Q A + ++ L+ R G ++L L A ++++DL Sbjct: 399 VASMRAVALQSEQQQRATQAAAGNLDLAQQRERVGTTNMLPALSAHMTLLAQRRMDLDLQ 458 Query: 430 IAKRQLAKSYVDLYIAIGSGYN 451 + L V L A+G G++ Sbjct: 459 ARRSDL---RVGLIKALGGGFD 477 >gi|220917579|ref|YP_002492883.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955433|gb|ACL65817.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 454 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 21/244 (8%) Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQ 249 + ++ G +++ L++ + + E D+ ++ LLG AT+F Sbjct: 199 AQVQVQAGTAARIVLLRAQIDRARAEEDLVRARNGLAGAKSTLAALLGRGEATDF----- 253 Query: 250 KQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 L P +PADL +R RP++R + + A + P+ Sbjct: 254 --------ALAQPPAPDLPADLSPLEDEAVRLRPELRAAGAAVEAATASRRAETARYLPT 305 Query: 303 LSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 L G + F G W+ G L +FD G +++ R A + E Sbjct: 306 LGAFGQARWSSVAGFTGKEESWAAGLSLQWELFDGGAREASRREAGARLVEAEAARASLA 365 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 L A EV A + + K + V L +++ L + +R G+ + L+ D A A Sbjct: 366 LQARDEVRRARLDLASARANRAKAEEQVALARENQRLVEVAFRAGQATSLEATDANVALA 425 Query: 423 KVEV 426 E+ Sbjct: 426 TAEL 429 >gi|329900782|ref|ZP_08272586.1| Outer membrane component of tripartite multidrug resistance system [Oxalobacteraceae bacterium IMCC9480] gi|327549371|gb|EGF33939.1| Outer membrane component of tripartite multidrug resistance system [Oxalobacteraceae bacterium IMCC9480] Length = 505 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 92/444 (20%), Positives = 185/444 (41%), Gaps = 68/444 (15%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASIS 105 + W S +L LV AL N T+ + RI AA+ + RA P+ S+ S Sbjct: 65 AMDWPGSLGGPALQSLVDEALATNPTLQISATRIAAAQALADATRAAAGPTVGGSFTSTY 124 Query: 106 HRFIPN----------LKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLN 155 R+ N L++++ L + +D +G RH A L + AQ Sbjct: 125 QRYTENGIIPPPLAGALRSDNQLALSFSYDLDFWG--RHA----AELRAVLAQ------- 171 Query: 156 VISKLIPSYIDARHFKERI----SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA- 210 I+A + R+ ++AH + ++++ ++L + Q T +L L L A Sbjct: 172 ------GKAIEAEQYSARLMLASAVAHSWMGMHRQALQLDLIARQQ--TVRLKLDDLTAR 223 Query: 211 -----------------EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 +++++ ++ +++ ++ + ++ LLG L Q Sbjct: 224 RIAAGLDNQSDNQIGQVQLQNLRTEQAQWQEALALSRNQLAALLGQGPDRGLTIALPQ-- 281 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIA 310 P +P+ +P L+ R DI + +I A++D YP+++L G + Sbjct: 282 -ITPVAALPLPDALPLALLGRRADIVAARWHVEALQGEIDTARTDFYPNINLAAFAGLSS 340 Query: 311 LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 L N + GP + LPIF+ G +++ ++ ++ T+ +T+ +A+ +V Sbjct: 341 LGLPNLINSGSAIAGIGPAIRLPIFEGGTLRARLKGKIAAYDAAVATYNQTLTDALHDVA 400 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA---TAKVEVD 427 + + S+ + AV+ + LS R G + L +L E A + E+D Sbjct: 401 DQVQSLRGAALQQEHQRLAVQAAGNVLRLSEQRQRVGTANQLQVLASEAALLQQRRTELD 460 Query: 428 LSIAKRQLAKSYVDLYIAIGSGYN 451 +S+ +L+ + L ++G G++ Sbjct: 461 VSL---RLSDLRISLIKSLGGGFD 481 >gi|312878829|ref|ZP_07738629.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] gi|310782120|gb|EFQ22518.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] Length = 418 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 12/171 (7%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 RPD++ Q ++ ++ + +A DL +++ G + S PG W G L LP+ Sbjct: 240 RPDLKAQGLRVEEASRNVALAAKDLAWNVAAWGG----YGWSDPGTG-EWKSGLTLSLPL 294 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 D G+ + + +A + +E T ++ A V ALT + ++ + + Sbjct: 295 LDGGRTDAKVGQARAKLEEARATEEDLRQKADLAVVEALTELRTAEESLRTALLVDRQAR 354 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 +++ L+ YR+G S L++ ++ ++ + A+R LAK+ DL IA Sbjct: 355 ENLDLARGRYREGVGSPLEV-------SQAALNRTKAQRSLAKARHDLRIA 398 >gi|289673331|ref|ZP_06494221.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. syringae FF5] Length = 147 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 7/65 (10%) Query: 14 LLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID-----TLKWWESFNDTSLNKLVKIA 68 LL+GC VGP+Y +P PL P ++ + + NI + WW+ F+D L+ V A Sbjct: 15 LLSGCAVGPDYQRPDAPL-PDRY-LTQPRGAANITAHPLVSAAWWDGFDDPLLSSFVSRA 72 Query: 69 LQQNL 73 L QNL Sbjct: 73 LAQNL 77 >gi|207723248|ref|YP_002253647.1| outer membrane efflux protein (partial sequence n terminus) [Ralstonia solanacearum MolK2] gi|206588446|emb|CAQ35409.1| outer membrane efflux protein (partial sequence n terminus) [Ralstonia solanacearum MolK2] Length = 319 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 33/243 (13%) Query: 6 AIFSLFIVLLAGCT-VGPEY-----TKPHM----PLLPTQFSIGNSKNLINIDTLKWWES 55 A+ ++ + +LAGC +G + T P LP+Q S+N W + Sbjct: 28 ALSAIALAVLAGCADLGNAHSTQTLTSPEQLASAGTLPSQGGRWPSQN--------WVDQ 79 Query: 56 FNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS---SYASISHRF---- 108 FND L LV A+ + + A R+ A++ + R DL+PS RF Sbjct: 80 FNDPQLRALVDEAIHDSPNLQVAFARVRASRAMADAARGDLYPSVGLDAEMTRQRFSSYD 139 Query: 109 ----IP---NLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 P N T S QL + +D +G+ R +ES+L++ + A+ A+L + + + Sbjct: 140 LFEGTPLGGNWVTESKIQLGVSYDLDFWGKNRAALESALSDDQAMEAESQAARLMLSTSV 199 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y + +A + + ++ + LS + G ++ + A I E+++ Sbjct: 200 ARTYAKLAALYAQRDVAERTIAQRRELVSLSGQRLRAGLYKRVETTQARANIAVKETELE 259 Query: 221 TLE 223 ++ Sbjct: 260 QVD 262 >gi|237727160|ref|ZP_04557641.1| outer membrane efflux protein [Bacteroides sp. D4] gi|229434016|gb|EEO44093.1| outer membrane efflux protein [Bacteroides dorei 5_1_36/D4] Length = 447 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 50/327 (15%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYAS---ISHR-------- 107 +L+ + AL++N+ + Q + + ++ + +A LFPS S+++ +++R Sbjct: 27 TLDDCIDYALEKNIQLQQDKISLEESSVDVKTAKAALFPSLSFSTGQNVTNRPYQETSNT 86 Query: 108 ------FIPNLKTNSTGQ--LDSDW-------KIDLFGQRRHIESSLANLDSAYAQVDIA 152 + KT G L++ W +++ QRR + +A L A + + + Sbjct: 87 VSGTEIISSDSKTTYNGNYGLNAQWTLWNGNKRLNTIKQRRTSQQ-IAGL--AVTETENS 143 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 I+++ +I + E + I L + + + F +G+ SK L +LE+++ Sbjct: 144 LQEQIAQI---FIQILYADESVKINRNTLQVSQATYDRGKELFQEGSISKADLAQLESQV 200 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPA 269 S + + T E S R + LL TE + + + + QP +P + Sbjct: 201 SSDKYQLVTSESSLRDYKLQLKQLLELDGTEEMDLVLPELADEHVLQP---LPAQEDVYQ 257 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GY 320 + +RP+I+ + + +S I +AK+ P++SL+ S ++T+ DNS+ G+ Sbjct: 258 QALASRPEIQSSKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGW 317 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N G + +PIFD + KS +++A Sbjct: 318 NNM--IGLNINIPIFDNRQNKSAVQKA 342 >gi|317968040|ref|ZP_07969430.1| RND family outer membrane efflux protein [Synechococcus sp. CB0205] Length = 575 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 16/130 (12%) Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + DN+ G N WS IFD G+ ++ R+++ AQE + ET EVE Sbjct: 404 SADNTV-GLNMRWS--------IFDGGRARAQYRQSKQQAQENAFRFAETRDRVRYEVEQ 454 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 + ++ D + + V ++S+ L+ + ++ G + +++D +R DL+ A Sbjct: 455 SFNNLRADTRTIQTTSREVLSSRESLRLARLRFQAGVTTQREVVDNQR-------DLTQA 507 Query: 432 KRQLAKSYVD 441 + + A++ D Sbjct: 508 QLRYARALAD 517 >gi|124003347|ref|ZP_01688197.1| putative outer membrane efflux protein [Microscilla marina ATCC 23134] gi|123991445|gb|EAY30876.1| putative outer membrane efflux protein [Microscilla marina ATCC 23134] Length = 496 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 84/410 (20%), Positives = 165/410 (40%), Gaps = 70/410 (17%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------------ISH 106 S+ K + A++ N+ I Q I + N+ + +PS AS ++ Sbjct: 48 SIQKCIDHAIEHNIDIKQNALTIKTNEYNVQQSKLARYPSVNASATQGLNFGRSIDPTTN 107 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDI-AKLNVIS-KLIPS 163 FI + LD+ + G+ ++ ++ L N++ +++D+ A N +S + S Sbjct: 108 EFINTRVLTNNFSLDASVTLYNGGRLQKTVKRDLKNIE--ISKLDLKATTNTVSLNIATS 165 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+D +E ++ A Q + K+ + + G+ ++ ++ L A + + E + T E Sbjct: 166 YLDVLLNQELLTAAQQQVASTKEQLTRTEKLLKAGSVAENEVINLRATLANDELQVVTSE 225 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNF--QPNLYIPINIGIPADLIRNRPDIRYQ 281 + + + L+ P+ E Q N QP+ P I A + ++P I+ Sbjct: 226 NNVNLARLRLMQLMNLPSNESFEVEQIDVENLVAQPHNETPAQIFDIAKV--SQPTIKSA 283 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLN-----------------GSIALTHDNSFPGYNTH- 323 + +S I IAK+D YP+L+L G +A T G N Sbjct: 284 LLSVENSEMSINIAKADRYPTLTLGAGVLTRFSDAGRLFQETGEVAQTPIGFVNGTNQTV 343 Query: 324 -----------WSFGP------------KLYLPIFDKGKIKSNI-------RRAESSAQE 353 ++FG +L +PIF+ G++ NI R+AE + Q Sbjct: 344 VRQINVTEEQPYTFGQQLSDNLTQYVSLRLSIPIFNGGQVNRNISTSIIQKRQAELTVQN 403 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + ++ + A + + S KK++ + A ++ KK + +N Sbjct: 404 RKNQLRQDIEQAYNNAKASQNSYQARKKLLESRELAFDIAKKRFNAGAMN 453 >gi|218533037|ref|YP_002423853.1| type I secretion outer membrane protein, TolC family [Methylobacterium chloromethanicum CM4] gi|218525340|gb|ACK85925.1| type I secretion outer membrane protein, TolC family [Methylobacterium chloromethanicum CM4] Length = 488 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/289 (18%), Positives = 117/289 (40%), Gaps = 42/289 (14%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 184 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIF 243 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLA 286 ++G + P P++ +PA L ++ P I + Sbjct: 244 RQIVGV-----------EPRQLAPGR--PLDRYVPASLDQAILIGLKEHPQILASLHAVD 290 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKG------- 338 + ++ + + LYP + G++ +D FPG N S ++ +P++ G Sbjct: 291 VAELQVKVNEGALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIR 350 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K N+ RA A + T + +++ +E + K V Q V+ ++ +++ Sbjct: 351 QAKENVGRARLVADQDRDTIRASIVRTWGNLEAS-------KAQVIASQAQVQANEVALN 403 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R G+ + LD+L+ ++ V L A+R + D+ A+G Sbjct: 404 GVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVG 452 >gi|237710770|ref|ZP_04541251.1| outer membrane efflux protein [Bacteroides sp. 9_1_42FAA] gi|229455492|gb|EEO61213.1| outer membrane efflux protein [Bacteroides sp. 9_1_42FAA] Length = 447 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 50/327 (15%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYAS---ISHR-------- 107 +L+ + AL++N+ + Q + + ++ + +A LFPS S+++ +++R Sbjct: 27 TLDDCIDYALEKNIQLQQDKISLEESSVDVKTAKAALFPSLSFSTGQNVTNRPYQETSNT 86 Query: 108 ------FIPNLKTNSTGQ--LDSDW-------KIDLFGQRRHIESSLANLDSAYAQVDIA 152 + KT G L++ W +++ QRR + +A L A + + + Sbjct: 87 VSGTEIISSDSKTTYNGNYGLNAQWTLWNGNKRLNTIKQRRTSQQ-IAGL--AVTETENS 143 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 I+++ +I + E + I L + + + F +G+ SK L +LE+++ Sbjct: 144 LQEQIAQI---FIQILYADESVKINRNTLQVSQATYDRGKELFQEGSISKADLAQLESQV 200 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPA 269 S + + T E S R + LL TE + + + + QP +P + Sbjct: 201 SSDKYQLVTSESSLRDYKLQLKQLLELDGTEEMDLVLPELVDEHVLQP---LPAQEDVYQ 257 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GY 320 + +RP+I+ + + +S I +AK+ P++SL+ S ++T+ DNS+ G+ Sbjct: 258 QALASRPEIQSSKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGW 317 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N G + +PIFD + KS +++A Sbjct: 318 NNM--IGLNINIPIFDNRQNKSAVQKA 342 >gi|226942047|ref|YP_002797121.1| TolC4 [Laribacter hongkongensis HLHK9] gi|226716974|gb|ACO76112.1| TolC4 [Laribacter hongkongensis HLHK9] Length = 467 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 77/422 (18%), Positives = 162/422 (38%), Gaps = 54/422 (12%) Query: 13 VLLAGCT----VGPEYTKP---HMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 LLAGC + P+ P + L+P +S + W++ +L LV Sbjct: 16 ALLAGCASTHGIEPQTRTPDPAALALVPA-----SSATAVRPVADDAWQALGSPALAGLV 70 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG----QLD 121 + AL N + A R+ AA +L R+ P A ++ + L+ ++ G + Sbjct: 71 QRALSDNPDLAAAAARVRAAGATLLQARSRRLPQLDARLT---VERLRESANGLYPPPIG 127 Query: 122 SDWK------------IDLFGQRRHIESSLANLDSAYA--QVDIAKLNVISKLIPSYIDA 167 W D +GQ + S + A + D+ +L + + Y+ Sbjct: 128 GQWYTLYQPEVTFSYLFDFWGQMAALARSAEAGVAVAAARERDVRRLLGYAVAM-QYVAL 186 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFR 227 ER + + L ++ L + G T + +L L A + + + Sbjct: 187 AESVERQELLSRELATFEARQSLLQQRVAAGLTPRSTLAVLRAATEQQRGALAAAGQQVA 246 Query: 228 MNVHNISTLLGYPATEFLHYMQKQSNNFQPN-LYIPINIGIPAD----LIRNRPDIRYQE 282 +N H ++ L G + + F P+ L P + +P++ + +RPD+ Sbjct: 247 LNRHALAQLTGQ--------GPEATRRFMPSPLPDPAALVLPSEPTLAALVSRPDVEAAR 298 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGK 339 + + I A++ YPS+SL+ L+ ++ + + P + LP+FD G+ Sbjct: 299 LAITAAAEDIHAARAAFYPSISLSAFAGLSAQDTGDLLTRASRMFGLAPVIDLPLFDGGR 358 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 ++ + A + ++ +++ A +E + ++ + + Q A + L Sbjct: 359 RRAGLAAASAGFDAANASYTASLITAAREAADGYAAVEASQAV----QQAATTARAEAGL 414 Query: 400 SM 401 ++ Sbjct: 415 AL 416 >gi|254564063|ref|YP_003071158.1| type I secretion outer membrane protein, TolC [Methylobacterium extorquens DM4] gi|254271341|emb|CAX27353.1| putative type I secretion outer membrane protein, TolC precursor [Methylobacterium extorquens DM4] Length = 503 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/289 (18%), Positives = 117/289 (40%), Gaps = 42/289 (14%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 199 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIF 258 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLA 286 ++G + P P++ +PA L ++ P I + Sbjct: 259 RQIVGV-----------EPRQLAPGR--PLDRYVPASLDQAILIGLKEHPQILASLHAVD 305 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKG------- 338 + ++ + + LYP + G++ +D FPG N S ++ +P++ G Sbjct: 306 VAELQVKVNEGALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIR 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K N+ RA A + T + +++ +E + K V Q V+ ++ +++ Sbjct: 366 QAKENVGRARLVADQDRDTIRASIVRTWGNLEAS-------KAQVIASQAQVQANEVALN 418 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R G+ + LD+L+ ++ V L A+R + D+ A+G Sbjct: 419 GVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVG 467 >gi|240141546|ref|YP_002966026.1| putative type I secretion outer membrane protein, TolC precursor [Methylobacterium extorquens AM1] gi|240011523|gb|ACS42749.1| putative type I secretion outer membrane protein, TolC precursor [Methylobacterium extorquens AM1] Length = 503 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/289 (18%), Positives = 117/289 (40%), Gaps = 42/289 (14%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 199 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIF 258 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLA 286 ++G + P P++ +PA L ++ P I + Sbjct: 259 RQIVGV-----------EPRQLAPGR--PLDRYVPASLDQAILIGLKEHPQILASLHAVD 305 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKG------- 338 + ++ + + LYP + G++ +D FPG N S ++ +P++ G Sbjct: 306 VAELQVKVNEGALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIR 365 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K N+ RA A + T + +++ +E + K V Q V+ ++ +++ Sbjct: 366 QAKENVGRARLVADQDRDTIRASIVRTWGNLEAS-------KAQVIASQAQVQANEVALN 418 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R G+ + LD+L+ ++ V L A+R + D+ A+G Sbjct: 419 GVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVG 467 >gi|300777729|ref|ZP_07087587.1| outer membrane efflux protein [Chryseobacterium gleum ATCC 35910] gi|300503239|gb|EFK34379.1| outer membrane efflux protein [Chryseobacterium gleum ATCC 35910] Length = 455 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 31/162 (19%) Query: 297 SDLYPSLSLNGSIALTH-DNSFP-----GYNTHW----SFGPKLYLPIFDKGKIKSNIRR 346 ++LYP++ L+ + N FP T+W S G + +PIF G K+ I++ Sbjct: 287 ANLYPTVGLSANYGWQGLGNKFPYATGSSQGTNWGDYASIGLAIKIPIFMGGATKAQIQQ 346 Query: 347 AESSAQE--QYITWQETVL-----NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 AE Q+ Q I Q+ L NA+ +ENA+ +I ++ V+L +K Sbjct: 347 AEIDIQDLDQDIQNQKLNLSLDYKNAVSNMENAIINIQS-------MKDNVDLAEKVQKN 399 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 + NY+ G +L ++LD E A L+ AK+ A + +D Sbjct: 400 TQSNYQYGLATLTEVLDTENA-------LTQAKQNYANALLD 434 >gi|313203363|ref|YP_004042020.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] gi|312442679|gb|ADQ79035.1| outer membrane efflux protein [Paludibacter propionicigenes WB4] Length = 503 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 16/186 (8%) Query: 267 IPAD-LIRNRPDIRY--QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 IP D + NRP+I+ Q + +A S KI +++ P++ L+G+ +T+ NSF GY Sbjct: 301 IPIDQALNNRPEIKQLIQLENIAKSNEKIMVSR--FLPNIVLSGNYLVTNPNSFDGYKNQ 358 Query: 324 ----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 +S G +P+F G + A+S + + +ET +++ + + E Sbjct: 359 FGGMYSIGVVANIPLFHFGDKVHTLNAAKSQHKIATLQLEETKEKMQLQIKQSSYKVAES 418 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVE-----VDLSIAK 432 K T +H VE ++++ + + +G + D+L + A +AK E +D+ + Sbjct: 419 LKKKTSTEHNVEQAEENLRYATEGFTEGVITSTDLLGAQTAWLSAKSEYIDANIDVKLTN 478 Query: 433 RQLAKS 438 LAKS Sbjct: 479 LYLAKS 484 >gi|150007009|ref|YP_001301752.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] gi|149935433|gb|ABR42130.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] Length = 444 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 43/290 (14%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AK ++ K + +Y+D ++K I +A + L+ + + + + G K + + EA+ Sbjct: 132 AKDDLAMKTMQAYMDVVYYKGTIRMAAEKLEESNRTLYKTRRQEELGLKGKADVAQFEAQ 191 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIP--INIG-I 267 + + + + + F + + + YP+ ++ + + P++ Y+P N+ I Sbjct: 192 VAADDYTLTHQQNLFNTALLTLRECMNYPSD-----LELEVDTLLPDINYVPEVENVAEI 246 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA------LTHDNSFPGYN 321 A N P E +L S + I K L PS+ LN I+ L DN+ G+ Sbjct: 247 FAYASGNNPTALQAEYQLTQSKYQYRIYKGKLLPSIYLNAGISTSYFENLKSDNAPEGFK 306 Query: 322 THW--------SFGPKLYLPIFD-------KGKIKSNIRRAESSAQEQYITWQETVLNAI 366 + SF L P+FD + ++N+R A + E + Q V ++ Sbjct: 307 DQFKNNRGEYVSFS--LSFPLFDGLSRLTNARRYRNNMRIARETRTEVFRQLQTAVEQSV 364 Query: 367 KEVEN-ALTSINEDKKIVT-KLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + E A +I DKK+ + +L + V L K Y +G S LD+ Sbjct: 365 LDREGYAKEAIQMDKKVKSDELAYRVTLRK---------YEEGLMSTLDV 405 >gi|325521059|gb|EGC99989.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. TJI49] Length = 91 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Query: 267 IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSL---SLNGSIALTHDNSFPGYNTH 323 +PA+L+ RPDI ++ + A ++ YP + +L G ALT + F Sbjct: 12 LPAELLGRRPDIVAARLRVEAAFANADSTRAQFYPDVNLVALGGVFALTPASLFSRDALA 71 Query: 324 WSFGPKLYLPIFDKGKIKS 342 S GP + LP+FD+G++K+ Sbjct: 72 GSVGPAISLPVFDRGRLKA 90 >gi|291533548|emb|CBL06661.1| Outer membrane protein [Megamonas hypermegale ART12/1] Length = 411 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/296 (19%), Positives = 135/296 (45%), Gaps = 20/296 (6%) Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 I +Y D K+ ++I + ++ Y+ ++ + G+ K +++ E + + + + Sbjct: 120 IKAYFDILEAKQNVNIEQESVNNYESHLTDVRNLYAAGSIPKSDVLRSEVALSNAQQSLI 179 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + + +N+ ++ E ++ +++F +Y + + +P L + Y Sbjct: 180 IAQNDYEINLSTFRNIIKIDRNEPINL----TDDF---VYQIVRMSLPECL---DYAMAY 229 Query: 281 QEKKLAD----SVAK--IGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH-WSFGPKLYL 332 ++ ++A +AK I +AK+ P+++L S++ + D + P N H + G Sbjct: 230 RKDRIASQIDVEIAKNNIDVAKAGYLPTVNL--SVSTSWDKQALPSGNDHDYQAGVSANW 287 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 IFD KSN++ AE+S + +T EV A ++ E ++ AV+ Sbjct: 288 NIFDNNVTKSNVKSAEASYNKAEYELSDTEDTIDLEVRQAYLNMREAERRFNSTAMAVKQ 347 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ ++ Y+ G +LD++D E A ++ ++ + A+ A+ +L IG+ Sbjct: 348 AEEDYFIATEKYKVGAGIILDVIDAELALSQARLNYASAQYDYARYKANLEYVIGT 403 >gi|312886441|ref|ZP_07746050.1| outer membrane efflux protein [Mucilaginibacter paludis DSM 18603] gi|311301069|gb|EFQ78129.1| outer membrane efflux protein [Mucilaginibacter paludis DSM 18603] Length = 438 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 82/422 (19%), Positives = 172/422 (40%), Gaps = 47/422 (11%) Query: 11 FIVLL-AGCTVGPEYTK----PHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLV 65 FI+ L A VGP + + H+P + W+ L + Sbjct: 10 FIIFLSAAIYVGPSHAQDTSATHLP--------------------QSWD------LKTCI 43 Query: 66 KIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 + A N+TI + A +N+L+ + +PS AS+S + N K+ + Sbjct: 44 EYAKNNNITINSLKLDVKTAGQNLLAAKTARYPSLSASVSQGVV-NYKSGAQASSGYGAN 102 Query: 126 IDL--FGQ---RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 DL F I+S + +A V+ ++ ++ +Y++ KE I + Sbjct: 103 ADLTIFNGGYLNNDIKSKTLSEQTANLSVETTTNDITLQITQAYLNILLAKENIVYLADL 162 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 + + + + G ++ L++L A + + + + T + + N + LL P Sbjct: 163 VTSSEAQVNQGQQRLAAGTIAQKDLLQLRATLANDKYTLVTAQNQLQQNTLTLKQLLQLP 222 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + + ++ NL + +N L RP+I+ + ++ A++ + Sbjct: 223 TSASFNVIASDTSR-AANL-MNLNTAQQKALAI-RPEIKSAMLNIQLQQTELEKARATIR 279 Query: 301 PSLSLNGSIALTHDNSFPG--YNT-----HWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P+LSL G++ +++S G Y+ + S G L +PIFDK ++N+ +A+ Q+ Sbjct: 280 PTLSLGGALYSGYNSSTTGSYYSQLNNGFYQSLGLTLSIPIFDKKVTRTNVAKAKIEVQQ 339 Query: 354 QYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 +T + L + VE A ++ + K+++ +S R G ++++ Sbjct: 340 AGLTLMDERLTLTQAVEKAYLNVQNANSQYSAAAEQFTYTKEALRISAEQLRIGSNNIVE 399 Query: 414 IL 415 L Sbjct: 400 YL 401 >gi|258592643|emb|CBE68952.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 382 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 63/326 (19%), Positives = 141/326 (43%), Gaps = 32/326 (9%) Query: 125 KIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +I G+R + I + ANL + A VD + + +Y K +++A +L Sbjct: 68 EIQTAGKRSQRIAVAGANLRATEADVDNTARLLRFAVKQAYFQIVLAKADLAVARDLLTD 127 Query: 184 YKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE 243 + + I +F G S L +++ E + D+ E + + ++ TLLG+ + Sbjct: 128 FDRTIRSKEEQFRLGEISGAELRRVQVERFRVFDDVVAGELNLKQARASLLTLLGHHDST 187 Query: 244 FLHYMQKQSNNFQP-NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPS 302 F + + +P P+++ + +++RPD++ Q +++ + + + ++ +P Sbjct: 188 FEFDVTEYLVKGEPVGGLAPLHV----EALQSRPDLKAQHQRIDRAREQTRLEQAQRFPD 243 Query: 303 LSLNGSIALTHDNSFPGYNTHWS-----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 L F GY ++S FG LP+F++ + + RA+ + + Sbjct: 244 LF-----------PFVGYKRNFSEDSVLFGVSAPLPLFNRN--QGGVVRAQGEEEREAFQ 290 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYSLLDILD 416 + A+ EV+ A +++ + L+ + ++S ++ ++ G L LD Sbjct: 291 LRRIEAQALLEVDQAFNRFESERRRLEGLETEYLPKARESREIAEAAHKLGAIDLTAFLD 350 Query: 417 IERATAKVE-------VDLSIAKRQL 435 +R +V+ +LSIA+ Q+ Sbjct: 351 AQRTFREVQRLYNRSLYELSIARFQV 376 >gi|255015954|ref|ZP_05288080.1| outer membrane efflux protein [Bacteroides sp. 2_1_7] gi|256841916|ref|ZP_05547421.1| outer membrane efflux protein [Parabacteroides sp. D13] gi|298377435|ref|ZP_06987388.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] gi|256736232|gb|EEU49561.1| outer membrane efflux protein [Parabacteroides sp. D13] gi|298265849|gb|EFI07509.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] Length = 444 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 43/290 (14%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AK ++ K + +Y+D ++K I +A + L+ + + + + G K + + EA+ Sbjct: 132 AKDDLAMKTMQAYMDVVYYKGTIRMAAEKLEESNRTLYKTRRQEELGLKGKADVAQFEAQ 191 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIP--INIG-I 267 + + + + + F + + + YP+ ++ + + P++ Y+P N+ I Sbjct: 192 VAADDYTLTHQQNLFNTALLTLRECMNYPSD-----LELEVDTLLPDINYVPEVENVAEI 246 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA------LTHDNSFPGYN 321 A N P E +L S + I K L PS+ LN I+ L DN+ G+ Sbjct: 247 FAYASGNNPTALQAEYQLTQSKYQYRIYKGKLLPSIYLNAGISTSYFENLKSDNAPEGFK 306 Query: 322 THW--------SFGPKLYLPIFD-------KGKIKSNIRRAESSAQEQYITWQETVLNAI 366 + SF L P+FD + ++N+R A + E + Q V ++ Sbjct: 307 DQFKNNRGEYVSFS--LSFPLFDGLSRLTNARRYRNNMRIARETRTEVFRQLQTAVEQSV 364 Query: 367 KEVEN-ALTSINEDKKIVT-KLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + E A +I DKK+ + +L + V L K Y +G S LD+ Sbjct: 365 LDREGYAKEAIQMDKKVKSDELAYRVTLRK---------YEEGLMSTLDV 405 >gi|148262889|ref|YP_001229595.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] gi|146396389|gb|ABQ25022.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] Length = 460 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 73/408 (17%), Positives = 163/408 (39%), Gaps = 29/408 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------------SYASISH 106 +L++ ++IA +N I +A E + + R+ P S I+ Sbjct: 53 TLDQALEIADSRNRDIQKAKEFFRQVEGKYVEERSAALPQFTVTGQVARQQDKSQGVIAG 112 Query: 107 RFIPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 IP L+ + ++ + +G+ I ++ +A ++ I++ + + ++ Sbjct: 113 GLIPTLEDTRSIEIGLSQAVFTWGKVGAAIRAAEKGFRTADERLRISRQDTRRDVAVAFY 172 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 D KE+ +IA Q LD +++++ + ++ G + + +++ ++ E Sbjct: 173 DILLAKEQFAIARQNLDQKERHLDEAQRRYAAGVATDYDTLAASVSVENARPEVIRTENL 232 Query: 226 FRMNVHNISTLLGYPA----TEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 R + LL L + K ++ L + ++RP++ Sbjct: 233 IRQAKDRLRFLLAVEVDVDVAGSLEAVMKPVPSYDETLTVAR---------KHRPELEEL 283 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN--SFPGYNTHWSFGPKLYLPIFDKGK 339 ++ SV + IA ++ P L + G + G WS G L P FD K Sbjct: 284 RQRKEISVELVKIANAEDKPRLDIKGGYGWRQLDVGDAHGNGQAWSAGIFLTFPFFDGMK 343 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + + +AES + I ++ + E +A+ ++ E +IV L V ++ +++ Sbjct: 344 TRGKVAQAESDRRSIEIDEKKLSDSISLETRDAINTVKEAGEIVRALSGTVNQAERLLAM 403 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + G L++ D E + +L+ A+R + V+L +G Sbjct: 404 AEKGFELGVKIRLEVEDAELNLLQARGNLTRARRDYLVAQVNLDRVMG 451 >gi|78486118|ref|YP_392043.1| Outer membrane efflux protein [Thiomicrospira crunogena XCL-2] gi|78364404|gb|ABB42369.1| RND outer membrane protein [Thiomicrospira crunogena XCL-2] Length = 443 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 63/122 (51%) Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 G +L +P++ G+ +++ + AQ+ +E L + ENA ++ + L Sbjct: 312 GIQLNVPLYLGGRTDASVSMQRNQAQKVQAAKRELSLALQAKAENAWLALKAGTSRLNAL 371 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + A++ K+++ + R GR ++LD+LD +R K+E D+ + K + ++ Y AI Sbjct: 372 KAALDSSKQAVEANEQALRTGRRNILDLLDAQRQLHKIERDIPVLKASIWQNVYAFYWAI 431 Query: 447 GS 448 G+ Sbjct: 432 GN 433 >gi|218781567|ref|YP_002432885.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] gi|218762951|gb|ACL05417.1| outer membrane efflux protein [Desulfatibacillum alkenivorans AK-01] Length = 443 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 85/441 (19%), Positives = 182/441 (41%), Gaps = 40/441 (9%) Query: 2 NILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 NIL+ I VLL G T P + + P +G L Sbjct: 3 NILKKIGLCMGVLLLGAT-PPGFAQETESQAPPPSKLG---------------------L 40 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-LKTNSTGQL 120 +++++A Q+L +L AT+ + AK I A+ P ++ + + Q Sbjct: 41 IEVMELAASQSLNVLSATQDRDVAKGRIREAYANALPVINGGTELLYVSDSISRGENEQA 100 Query: 121 DSDWKID--LFGQRRHIESSL--ANLDSAYAQ--VDIAKLNVISKLIPSYIDARHFKERI 174 + ++ LF + I + + A L Y++ ++ A+L + Y D + + Sbjct: 101 TASVSLNQPLF-RAGSIAAGIRAAKLYEDYSEKSIESARLEAVRAACIRYYDVLLARADL 159 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 + LDL K N+++ + QG + L +++ ++ + ++D+ + + + + + Sbjct: 160 QAVSETLDLSKYNLDVVTGRKAQGTATNLDVIRAREQMSNNQADLLSAKNALSIAKMRLF 219 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRPDIRYQEKKLADSVAKIG 293 T+L + + +P L G P D+ + +RPD++ + ++A I Sbjct: 220 TVLRLSPDSLIAVEGELCFVKEPELE-----GAPLDIAMEHRPDLKVLKTQVAMQDENII 274 Query: 294 IAKSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 +SD S+ G + S + + + G LPIF+ ++ + + E + Sbjct: 275 ATRSDRLLSVDAVGKYSFVKPESPLYDDWTEEYYGGVVFTLPIFEGRRVSGRMIQ-EKAI 333 Query: 352 QEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 + QY + + I+ EV AL ++ ++V + +V ++++ L+ Y G Sbjct: 334 RNQYQYAVDQKNDDIRLEVNEALDNLKAAAQVVKARETSVLQAQEALRLAQSGYEHGVNE 393 Query: 411 LLDILDIERATAKVEVDLSIA 431 LD+L+ + A+ ++ S A Sbjct: 394 QLDVLNAQVTFAESRLNYSRA 414 >gi|313107419|ref|ZP_07793609.1| cobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family [Pseudomonas aeruginosa 39016] gi|310880111|gb|EFQ38705.1| cobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family [Pseudomonas aeruginosa 39016] Length = 428 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 82/405 (20%), Positives = 173/405 (42%), Gaps = 31/405 (7%) Query: 55 SFNDTS--LNKLVKIALQQN---LTILQATERINAAKENILSVRADLFPSSYASISHRFI 109 SFN TS L + ++ AL+ N + + TE + A++ A L P+ +S Sbjct: 35 SFNGTSISLEQALERALRSNPELAAVGRETEIASGARQQ-----AGLIPNP--DLSWSVE 87 Query: 110 PNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + N + ++L G+R +E + + A+ Q+++ + + +++ +Y A Sbjct: 88 DTRQGNRQTSVSIAQPLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAAL 147 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 +ER+ +A LDL ++ ++ + + G+ S + V+ + + + D+ E + Sbjct: 148 TAQERVRLAKTSLDLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQR 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN---RPDIRYQEKKL 285 +S+ P F +P +I A L+R+ P +R +++ Sbjct: 208 TYVQLSSTWDEPQPGFARVGGALD-------AVPASITRGA-LLRHLDESPTLRLAAQEV 259 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYNTHWSF-GPKLYLPIFDKGKIKSN 343 A A++ + K P+L++ SI +D + G + G + LP+FD+ + N Sbjct: 260 ARGEAQVDLEKRQRIPNLTV--SIGSKYDQTARDGRGERVNLIGLSMPLPLFDRN--QGN 315 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI- 402 I A+S + + T+L E A + ++ + ++ + +S SM Sbjct: 316 IYAAQSRVDQARDLQRATLLRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTR 375 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + G+++ LD+LD +R V A A++ V + +G Sbjct: 376 GFEMGKFNFLDVLDAQRTLVGVRAQYVRALDAAAQARVSMERLLG 420 >gi|206602724|gb|EDZ39205.1| Putative outer membrane efflux protein [Leptospirillum sp. Group II '5-way CG'] Length = 474 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 7/200 (3%) Query: 255 FQPNLYIPINI-GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 + P L IP + A I +RPD++ +++ + ++ P++ G+ +L Sbjct: 267 YHPELSIPYTPEQVVAIAISHRPDLKQLDQQTIAQKQAVRFNQAQFMPTVQTVGAYSL-- 324 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL--NAIKEVEN 371 D+ F +WS + +PIF+ +R +S AQ + + +Q L I+ V + Sbjct: 325 DSEFFPLVYNWSVATTVTIPIFNGFLNVQQVR--QSRAQLKQVRFQREDLRQGVIQSVLS 382 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 L ++ ++ + Q VE +++ L+ +R G + + + ER AK DL A Sbjct: 383 DLFTLKTAEQKIRDAQTLVEQAMQNLDLTETQFRVGTGTTVAVTQTERDLAKARSDLVQA 442 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 + A S L +G Y+ Sbjct: 443 QADFAISLAQLKRDMGINYD 462 >gi|312898374|ref|ZP_07757764.1| type I secretion outer membrane protein, TolC family [Megasphaera micronuciformis F0359] gi|310620293|gb|EFQ03863.1| type I secretion outer membrane protein, TolC family [Megasphaera micronuciformis F0359] Length = 521 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 10/152 (6%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKL 330 ++ RP++ + + IG+A+S P++++ G+ D FPG N W + Sbjct: 333 MKYRPEVLQAALAVEKADENIGVAQSGYRPTVAV-GAGRNWFDTDFPGTKNKGWQLQGTV 391 Query: 331 YLPIFDKGKIKSNIRRAESS---AQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKL 386 LPI+D G ++ + A+ + A+E ++ + A++ EV+ A +I + V Sbjct: 392 SLPIWDGGATRAKTKEAKEAFTKAREN----EQKIREAVQLEVKQAYLAIRSAAQRVQAT 447 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q V +S ++ + Y+ G LD+LD + Sbjct: 448 QTVVNQATESFKIATVRYQAGVGINLDVLDAQ 479 >gi|163854092|ref|YP_001642135.1| TolC family type I secretion outer membrane protein [Methylobacterium extorquens PA1] gi|163665697|gb|ABY33064.1| type I secretion outer membrane protein, TolC family [Methylobacterium extorquens PA1] Length = 497 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/289 (18%), Positives = 117/289 (40%), Gaps = 42/289 (14%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 193 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIF 252 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLA 286 ++G + P P++ +PA L ++ P I + Sbjct: 253 RQIVGV-----------EPRQLAPGR--PLDRYVPASLDQAILIGLKEHPQILASLHAVD 299 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKG------- 338 + ++ + + LYP + G++ +D FPG N S ++ +P++ G Sbjct: 300 VAELQVKVNEGALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIR 359 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + K N+ RA A + T + +++ +E + K V Q V+ ++ +++ Sbjct: 360 QAKENVGRARLVADQDRDTIRASIVRTWGNLEAS-------KAQVIASQAQVQANEVALN 412 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 R G+ + LD+L+ ++ V L A+R + D+ A+G Sbjct: 413 GVREEARVGQRTTLDVLNAQQELLSARVALIRAQRDRVVNSYDVVQAVG 461 >gi|198277104|ref|ZP_03209635.1| hypothetical protein BACPLE_03312 [Bacteroides plebeius DSM 17135] gi|198269602|gb|EDY93872.1| hypothetical protein BACPLE_03312 [Bacteroides plebeius DSM 17135] Length = 425 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 14/174 (8%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----- 328 +RP++R ++A + IA S P LS + + S PGY+ + P Sbjct: 245 HRPELRIAANQVAIQQSAARIANSRYLPKLS----VGVDGSYSSPGYDFNSDLDPNYRVY 300 Query: 329 -KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKL 386 KL +PIF+ GK K N RR + + Q V + ++ EVE A + + + V Sbjct: 301 AKLSVPIFEWGKRK-NTRRIGKLDVNRALENQSKVADGVRLEVETAYYTYTQAVRQVCLT 359 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD--LSIAKRQLAKS 438 + ++ S L+M Y++G S++++L+ + + E++ S + QLAKS Sbjct: 360 ESSLAKAATSEQLAMDKYKEGTISIVEVLNAQMYHQEAELNHIRSKLRAQLAKS 413 >gi|313894643|ref|ZP_07828206.1| outer membrane efflux protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440833|gb|EFR59262.1| outer membrane efflux protein [Veillonella sp. oral taxon 158 str. F0412] Length = 486 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 78/386 (20%), Positives = 159/386 (41%), Gaps = 46/386 (11%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFIPNLK 113 + N+T + + +AL N T Q AAK + V A PS SYA + R + Sbjct: 66 ALNET---RTIDLALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYAWNAQRTGGDTG 122 Query: 114 TNSTG-------------QLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKL 160 + +G QLD+ ID R E A+ + A Q AK + IS Sbjct: 123 SGKSGSHNFSISAPVFHPQLDAS--ID--SARYTREGIGASYEEALQQ---AKYDAIS-- 173 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y + + +A Q + Y+ ++ ++ G + ++ + + E+ + Sbjct: 174 --GYYTLIMNRNLVDVAQQAVKDYQGHVTNVEAQYNVGLVASSDVLAAKTNLADSETSLV 231 Query: 221 TLEKSFRMNVHNISTLLGYPA----TEFLHYMQKQSNNF---QPNLYIPINIGIPADLIR 273 + + + +++ ++ YP T H +Q + N Q Y ++ + L++ Sbjct: 232 KAQNTANLAEASLNQVIAYPVQTSITTAEHDLQYKPYNVTLEQAKAYAMLH---RSALVK 288 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYL 332 + D++ E+ + AK+ P++++ + + G +T WS G Sbjct: 289 SALDVKSAEEAVRS-------AKAGYLPTVAVKAGRGYIDPDGYFGTSTKSWSVGASASW 341 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 ++D G ++ I++A + ++ TV + V+ A ++ ++ + Q AV Sbjct: 342 SLWDGGATQNAIKKANAQLEQAKEANLATVDAVLLAVQKAYLNLRSAEQTIQSTQTAVAQ 401 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE 418 ++S ++ + YR G + LD+LD E Sbjct: 402 GQESFRIATLRYRAGVGTNLDVLDAE 427 >gi|224827225|ref|ZP_03700320.1| outer membrane efflux protein [Lutiella nitroferrum 2002] gi|224600618|gb|EEG06806.1| outer membrane efflux protein [Lutiella nitroferrum 2002] Length = 325 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 28/300 (9%) Query: 16 AGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTL---KWWESFNDTSLNKLVKIALQQN 72 GC VGP Y +P + + + K D L WW+ F D L+ L + N Sbjct: 18 GGCAVGPNYQRPSVAVPEAYQEAKDWKPATPADHLPRAAWWQDFADAQLDSLQQQLQLHN 77 Query: 73 LTILQATERINAAKENILSVRADLFPS----SYASISHRFIPNLKTNS-TGQLDSDWKID 127 T+ A A+ + +A PS + AS + NS +L + W++D Sbjct: 78 QTLRAAEASYRQAQALLQQAQAGYSPSVTAGASASRGRAGGDSAIANSYRAELSAAWELD 137 Query: 128 LFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL--- 183 L+G+ RR +E+ A+ +++ A ++ +L+ ++L +Y FK + +A + L L Sbjct: 138 LWGRVRRTVEAGRASAEASAADLESVRLSAQAQLASAY-----FK--LYVADRTLRLLEE 190 Query: 184 ----YKKNIELSHLKFTQG-ATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 Y++ ++++ ++ QG ++ + + + + G Sbjct: 191 QVAAYRQQLQITRNRYRQGVGIARRRGAGRDPAQEHRGQPARQARDAAPAGARHRRAGWG 250 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI-RNRPDIRYQEKKLADSVAKIGIAKS 297 P LH + S P G+P+ L+ R PDI E++ +IG+ K Sbjct: 251 RPPGR-LHAGRGASKP--PGAAAGCRPGLPSQLLERPPPDIAAAERRRRRDNRRIGVGKG 307 >gi|255593367|ref|XP_002535850.1| Cobalt-zinc-cadmium resistance protein czcC precursor, putative [Ricinus communis] gi|223521738|gb|EEF26533.1| Cobalt-zinc-cadmium resistance protein czcC precursor, putative [Ricinus communis] Length = 403 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 37/311 (11%) Query: 123 DWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 D I+L +R I+S+ +++A + + I K + +K+ ++ D +ER+S+A L Sbjct: 78 DQPIELGNKRDNRIKSADIRIEAANSDIAIKKAEIYAKVHAAFYDVLAAQERLSLAQASL 137 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG--Y 239 ++ +K + + + G S + K I + + + + ++ L G Y Sbjct: 138 EVARKAKDAASKRVQAGKVSPVEETKSRVAESGIRIEANQAISTLNVARNRLTALWGNAY 197 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPA--DLIRNRPDIRY-QEKKLADSV--AKIGI 294 P T L + + N IP IP+ DL R D Y Q KL V A++GI Sbjct: 198 PTT--LRAVGEIEN-------IPT---IPSWQDLSRMLDDAPYIQRAKLEIDVRQAQVGI 245 Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQ 352 S P L L + N G T G + +P+FD+ G ++S + R + + Sbjct: 246 EHSKQTPDLML---VFGAKRNEELGL-TQAVLGFSIPIPVFDRNQGNLQSAVSRVDKARD 301 Query: 353 E--QYITWQETVLNAIKEVEN-ALTSINEDKK-IVTKLQHAVELHKKSMSLSMINYRQGR 408 E + ET LN+ E N A S+ K+ I+ Q A + K G+ Sbjct: 302 ELTAFTVQMETQLNSAYERLNMARQSVETLKQEILPGAQSAFDAAAKGFEF-------GK 354 Query: 409 YSLLDILDIER 419 ++ LD+LD +R Sbjct: 355 FNFLDVLDAQR 365 >gi|190575774|ref|YP_001973619.1| putative outer membrane protein [Stenotrophomonas maltophilia K279a] gi|190013696|emb|CAQ47331.1| putative outer membrane protein [Stenotrophomonas maltophilia K279a] Length = 452 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 21/194 (10%) Query: 254 NFQPNLYIPINIGIPADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 +F+P +P N G +L+ P ++ QE K++ + A + A+ YP+LSL GS Sbjct: 224 DFRPE--VPANRGNIDELVHQATTQNPALKAQELKVSAAEAGVQAARGGHYPTLSLGGSW 281 Query: 310 ALT---HDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS---AQEQYITW 358 T D++ P T+ S G L +PIF G +S +R+A + AQ+ Y Sbjct: 282 GKTATWGDSTGSGSLSPDARTN-SIGLTLNVPIFAGGATQSGVRQALAQRDIAQDGY-EQ 339 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+ L+ + NA ++ + V + AV + + S + G ++LD++ + Sbjct: 340 QKRALD--RNTRNAYQTLVQGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLDVIQNQ 397 Query: 419 RATAKVEVDLSIAK 432 R ++D + A+ Sbjct: 398 RILFSAQLDYAQAR 411 >gi|167893059|ref|ZP_02480461.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 7894] Length = 192 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 24/173 (13%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 12 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 72 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 131 Query: 114 TNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + W++DLFG+ + + + +LA + A++++++ + Y+ Sbjct: 132 RTYNVGVSASWELDLFGRVQSLKDQALAQYFATAQARKAAEISLVASVADQYL 184 >gi|163793114|ref|ZP_02187090.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] gi|159181760|gb|EDP66272.1| branched-chain amino acid aminotransferase [alpha proteobacterium BAL199] Length = 479 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 170/420 (40%), Gaps = 57/420 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + + N T+L A ++ EN+ +A P+ +S+S + + + S+G Sbjct: 46 TLEEALALTYSTNPTLLAARAQLRVTDENVSQAKAGWRPTVTSSLSA-GVTDTQGKSSGV 104 Query: 120 LDSDW-KIDLFGQ-------------RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 +D K G+ I S A++ + A + ++ V+ + + +Y+ Sbjct: 105 TTTDATKFPRTGRISITQPVYTGGSVSATIAGSEADVQAQRASMFSSEQTVLLQGVVTYV 164 Query: 166 DARHFKERISIAHQILDLYK--KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + +E ++ Q+ +L + K +E + +F G ++ + + EA + +D E Sbjct: 165 NV--LREEATLELQLNNLTRLQKQLEATRDRFRVGEVTRTDVAQAEARVSRARADRTQAE 222 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP---DIRY 280 + ++G Q +P G PA L +RP DI Sbjct: 223 GNLVTARVTFERIVG----------QVPDGVVRP--------GEPAGLPVSRPEAVDIAL 264 Query: 281 Q------EKKLADSVAKIGIAKSD--LYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLY 331 + + K + A+ I +S+ LYP LS+ G T D S T S +L Sbjct: 265 RDNFTLVQAKFTELSARHAIDESEAALYPKLSVVGQAQKTFDTSGSDNEVTSLSAELQLT 324 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PI+ KG S IR+++ +A + T + V +A S + L V Sbjct: 325 IPIYQKGSEYSVIRQSKETANRSRLLVDSTRREVVDSVASAFESYQTALARIDSLNAEV- 383 Query: 392 LHKKSMSLSMINYRQ----GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 KS +++ +Q G ++LD+LD E+ +V L A+R + L A+G Sbjct: 384 ---KSSEIALDGVQQEATVGARTVLDVLDAEQELLDGQVQLVQAQRDAIVASYQLLQAMG 440 >gi|300693473|ref|YP_003749446.1| outer membrane protein of the copper-transporting efflux system cuscfba [Ralstonia solanacearum PSI07] gi|299075510|emb|CBJ34803.1| Outer membrane protein of the copper-transporting efflux system CusCFBA [Ralstonia solanacearum PSI07] Length = 453 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 21/183 (11%) Query: 269 ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 ADL+ N PD+ + ++ A++ +S +PSL+L GS+ + P Sbjct: 275 ADLVGNVLATHPDLEADRAAVREAEARLAHERSQRWPSLALRGSV-----DRQPDLQDS- 328 Query: 325 SFGPKLYLPIFDK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G + +P+FD+ G+ + + RA + +++ + ++ V +A ++ E A + ++ Sbjct: 329 RVGLVVSIPLFDRREGPVGEAVAALERARAVLRDRELQMRQAVESAYRQYEIAQSQVSAL 388 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + V K + ++ ++ YR G +LD LD +R + DL A+ L + Sbjct: 389 ESGVVKQ------AESALRVAEAAYRHGERGILDYLDAQRVFRQARNDLITARADLRTAA 442 Query: 440 VDL 442 V+L Sbjct: 443 VEL 445 >gi|213612910|ref|ZP_03370736.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 386 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 71/365 (19%), Positives = 149/365 (40%), Gaps = 55/365 (15%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +DL+G+ R + + + + + A+ + + +L+ S + AR + E Sbjct: 49 TNGTFGLTAGWDLDLWGKNRAEVTARIGAVKAREAEQEQTR-----QLLASGV-ARLYWE 102 Query: 173 R----------ISIAHQILDLYKKNIELSHLKFT---QGATSKLSLVKLEAEIKSIESDI 219 + I H+ ++ N EL T +G + + K + ++ + + Sbjct: 103 WQTQAALKNVLMQIEHEQQNVVAVNRELYQHGITSSVEGVETDIDASKTQQQLNDVNGKM 162 Query: 220 PTLEKSFRMNVHNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +E + S L PA E +P +G L+ Sbjct: 163 KVIEARLSALTNTQSAALKLRQVSLPAVES---------------QLPSQLGYS--LLAR 205 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLY 331 R D++ + S++ I AK+ YP ++L + AL + F + L Sbjct: 206 RADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQYGITGGLT 265 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 LPIFD G++ +N+ A++ + + + V++A+ +V A + + + + K QH + Sbjct: 266 LPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV---ETLAQKNQHQQQ 322 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAI 446 + + + + Q R++ I + AK+ + + + + Q + + L A+ Sbjct: 323 IEHDAQRV--VGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQGQWLDASIQLTSAL 380 Query: 447 GSGYN 451 G GY+ Sbjct: 381 GGGYH 385 >gi|269121892|ref|YP_003310069.1| outer membrane efflux protein [Sebaldella termitidis ATCC 33386] gi|268615770|gb|ACZ10138.1| outer membrane efflux protein [Sebaldella termitidis ATCC 33386] Length = 418 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 19/176 (10%) Query: 265 IGIPADLIR-NRPDIRYQEKKLADSVAKIGI--AKSDLYPSLSLNGSIALTHD------N 315 I D+IR + Y+ +L ++KI I AKS YP++ N S++ D + Sbjct: 229 INYTEDIIRLEDENSEYKISELQSEISKINIDSAKSIYYPTI--NASVSYGTDSQPEFSD 286 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 SF G N+ +FG +FD G K ++++A+++ + + N +++V AL S Sbjct: 287 SFKGENSFMTFGVTFKWQLFDWGSAKDDVKKAKNNLEISKLKQT----NVLEDVRTALKS 342 Query: 376 INED----KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 D +K++ Q AVE + L Y+ +L D+L+ E + ++D Sbjct: 343 TYMDIVHSEKVLETKQKAVETAAEVYKLETERYQYNLITLRDLLNAEVKLRESKID 398 >gi|332186093|ref|ZP_08387839.1| type I secretion outer membrane , TolC family protein [Sphingomonas sp. S17] gi|332013908|gb|EGI55967.1| type I secretion outer membrane , TolC family protein [Sphingomonas sp. S17] Length = 508 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 70/397 (17%), Positives = 159/397 (40%), Gaps = 33/397 (8%) Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPS--SYASISHRFIP------NLKTNSTGQ 119 A Q N TI A EN+ R++ PS S A + I N + +TG Sbjct: 35 AYQSNPTITGQRAAQRATDENVPIARSNGLPSLQSQAQFTDNVIVANNNFLNPERVATGA 94 Query: 120 LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L + G + + ++ +D+ AQ+ + N+ + ++ +Y++ + +++ Sbjct: 95 LQLSVPLYQGGAVKNAVRAAETRVDAGRAQLRGVEANLFTNVVAAYMNVIRDEAIVNLNT 154 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 + +++ + N+ S +F G ++ + + EA + + + + + + + N ++G Sbjct: 155 RNVNVLETNLRASRDRFQVGDLTRTDVAQSEARLAQARAQLQSAQANLISSRENYVQVVG 214 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 + PN + + + P + + + I +A+++ Sbjct: 215 VAPVGLEQPPALPALPASPNEAVGV-------ALEQNPQLIAARRNADAARYDINVARAN 267 Query: 299 LYPSLS-------LN--GSIAL-THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 P ++ N GSI + + P + + G +L +P+F G+ + +R+AE Sbjct: 268 RLPRIAAVSSGNYFNYLGSINVPAGAGNVPTSGVNATVGAQLTMPLFQGGRPAAQVRQAE 327 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + T + +V +A ++++ + AV + S+ G Sbjct: 328 ALRGQALENTTATERQVVAQVRSAYAVWQSSQEVIASAESAVRANSLSLEGVRAENSVGT 387 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 ++LDIL+ E+ +V L A+R D Y+A Sbjct: 388 RTVLDILNAEQELLNSQVTLVTARR-------DAYVA 417 >gi|312880656|ref|ZP_07740456.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] gi|310783947|gb|EFQ24345.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] Length = 463 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 66/341 (19%), Positives = 134/341 (39%), Gaps = 41/341 (12%) Query: 116 STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 S G L ++ K FG + +A A+ + V+ + ++ + R + Sbjct: 124 SGGSLTANRKAAEFG-----------VQTAAAEGERTVQTVLHHVRAAFYAHQRAAARKT 172 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +A Q LDL K+++ G +K +++++ + + E D+ + Sbjct: 173 VAIQALDLAKQHLLKVQAFHRAGVVAKNEVLRVQVAVSNAELDLIRANSAVAQAWTACER 232 Query: 236 LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR----NRPDI------RYQEKKL 285 +G P ++ + + P P +P D + RP++ R Q ++ Sbjct: 233 AVGAPLSQDRYVLP-------PPEATPPVYDVPGDPVSLAETRRPELKGLASARNQALQV 285 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 A++ A G P LS G +T + +P + L FD G+ ++ +R Sbjct: 286 AEAAAGQG------RPHLSFQGEANVTDNGFWPTEQDDYRLALNLQWRFFDFGETEAKVR 339 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 + +++AQE + + +EV A + E + V + V L ++ +++ Y Sbjct: 340 QGKAAAQELLHQLDDLRIQVRQEVIEATQRLEEGRARVEVARTQVTLAEEDYRMALKRYE 399 Query: 406 QGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 + LD+LD V L+ ++ QL + D AI Sbjct: 400 AQVGTNLDVLD-------ARVALNNSRTQLVDAVYDTAGAI 433 >gi|1731916|emb|CAA67082.1| czcC [Cupriavidus metallidurans CH34] Length = 417 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 33/285 (11%) Query: 147 AQVDIAKL--NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 AQ +A + ++ +++I S+ +ER+ +A D+ + + + + G S + Sbjct: 125 AQATLAGVRGDIRAQVIESFFSVLIAQERVKLATGSADIAARGAQAAS-RVAAGKISPVD 183 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 K E + E ++ S + ++ L G + +F Q NL + Sbjct: 184 ETKARVEQANAELELAEATASLQSARQALTALWGNASPQFAEA--------QGNLDALPS 235 Query: 265 IGIPADL---IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN 321 P L + N P + +L A +G+ +S YP L++ S+ D N Sbjct: 236 RPAPELLQKELENSPLVAASRAELDRRQALVGVERSRQYPDLTV--SLGAKRDTE---AN 290 Query: 322 THWS-FGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 + + G + LPIFD+ G + S IR+A+ AQ++Y+ N I N L + N+ Sbjct: 291 RNMAVIGVAIPLPIFDRNQGNLYSAIRQADK-AQDEYLA------NRISLTRNLLMASNQ 343 Query: 379 ----DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T Q + +++ + + I + G+++ LD+LD +R Sbjct: 344 LSVSRASAQTLKQTVLPGAEQAFNAATIGFEAGKFNYLDVLDAQR 388 >gi|115377597|ref|ZP_01464794.1| outer membrane efflux protein, putative [Stigmatella aurantiaca DW4/3-1] gi|115365398|gb|EAU64436.1| outer membrane efflux protein, putative [Stigmatella aurantiaca DW4/3-1] Length = 462 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 56/295 (18%), Positives = 126/295 (42%), Gaps = 5/295 (1%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L V + +Y A KE + +A Q L +K++ + G ++ L + + Sbjct: 170 LQVALAVRSTYFTAHVDKELVEVARQTLHNLEKHLMQTEGMVAVGTAPEIDLAQARTNLA 229 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLI 272 + + + + E ++ ++ +G+ T L Y + ++ + PI + + A + Sbjct: 230 TGRAQLVSAENAYLTAKALLNQAVGW--TLNLDYEVADRTVDPVEGEDSPIEV-LEAAAL 286 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 ++RP++ +++L + + K P+LS N S+ + + + + G L Sbjct: 287 KSRPELASLQRQLDAQLLTVRAIKGGYAPTLSGNLSVT-PGGTALDSLSWNVAGGLSLTW 345 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P+F G ++ +R AE+ A++ + + ++E A ++ K +++ AV Sbjct: 346 PLFQGGMTRAQVREAEAVAEQLSAQIDQERMQVRVDLEQARLAVRAAKALLSAQLDAVVN 405 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + + L+ Y +G + ++I D + A E QLA + L A+G Sbjct: 406 ARDQLRLAEGRYAEGVGNGIEIGDAQVALTSAEAQQVQTDGQLATARAQLLYALG 460 >gi|218690286|ref|YP_002398498.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli ED1a] gi|218427850|emb|CAR08616.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli ED1a] Length = 362 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 146/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + ++ Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQNQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 134 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 193 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 194 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 253 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 254 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 308 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 309 LAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|301308843|ref|ZP_07214795.1| outer membrane efflux protein [Bacteroides sp. 20_3] gi|300833367|gb|EFK63985.1| outer membrane efflux protein [Bacteroides sp. 20_3] Length = 463 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 18/266 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K+ QG ++ L++ + +K+ E ++ E S + + LLG + Q Sbjct: 203 KYEQGTVAEYDLIRADVTVKNTEPNLLQAENSLTLAKWQLKALLGMDLDLNID-CDGQLT 261 Query: 254 NFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 +F+ +L Y+ + + + + D++ ++ K + + K D P+LSL G Sbjct: 262 DFKSSLFADYLSTDTTLSENTDLKQLDLQAEQLK-----KTLVMQKFDYLPTLSLTGLYQ 316 Query: 310 --ALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 A+ +D F Y N + G L +PIF G +++ + S + + +T N Sbjct: 317 WSAMNNDFKFKNYRWNPYSMIGITLSVPIFSGGSKFYKVKQTKVSIDQLNLQRDDTKRNL 376 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK 423 V+ + ++N K Q VE ++ +S Y G + L++ D E A A+ Sbjct: 377 QLAVKQYIDNMNTCIKKFDAAQKGVEQAERGYMISQKRYDTGAGTWLEMNDAELALTQAR 436 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGSG 449 + + SI +AK+ DL +G+G Sbjct: 437 LNFNQSIYDYMVAKA--DLEKVLGNG 460 >gi|24375392|ref|NP_719435.1| outer membrane channel protein [Shewanella oneidensis MR-1] gi|24350226|gb|AAN56879.1|AE015823_1 outer membrane protein TolC [Shewanella oneidensis MR-1] Length = 435 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 92/408 (22%), Positives = 169/408 (41%), Gaps = 56/408 (13%) Query: 70 QQNLT----ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 QQ LT +LQA + NA E I RA L P+ A++ + N + + L K Sbjct: 31 QQALTNDPLVLQAQAQRNALFEKIEQNRAPLLPTISANVGYDKAWNDPRDDSSGLTGSLK 90 Query: 126 ID--LFGQRRHIESSLA-----NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ++ ++ + SLA DS YA A N+IS++ +Y D K+ Sbjct: 91 LNQVIYDHSAWVGLSLAEKAASQADSTYAS---ALQNLISRVTKAYFDVLTAKDNYEFQG 147 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ +E + +F G T+ + + +A+ + E + + + + G Sbjct: 148 AEKRAIERQLEQTKQRFAVGLTAITDVHEAQAQYDLASASEILAENTLANSYEALREITG 207 Query: 239 --YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR----NRPDIRYQEKKLADSVAK- 291 + A L +N F P + D ++ N D+ Q ++ +A+ Sbjct: 208 IDHKALNVLD-----TNRFSAVTPAPSS---STDWLKIAETNSVDLMTQ--RIGKDIAQE 257 Query: 292 -IGIAKSDLYPSLSLNGSIALT-----HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 I + K+ PSLSLN A D S P ++ + S G L +PIF+ K+ S ++ Sbjct: 258 TISLYKAGHMPSLSLNAGYAKGLEQKLGDASEPDFD-NMSVGINLSVPIFEGFKVSSQVK 316 Query: 346 RAESSAQEQYITWQE----TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 AQ QY+ E T +K V N ++ + + +V + ++ + Sbjct: 317 E----AQFQYVQASERLEQTYRGVVKNVRNNYNNVGASISSIRAYEQSVISSESALKATQ 372 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK---SYVDLYIAI 446 + G +++D+L+ R DL +KR+L+ SY++ +A+ Sbjct: 373 AGFEVGTRTIVDVLNRTR-------DLYDSKRKLSDARYSYINSIVAL 413 >gi|311747293|ref|ZP_07721078.1| putative outer membrane efflux protein [Algoriphagus sp. PR1] gi|126579006|gb|EAZ83170.1| putative outer membrane efflux protein [Algoriphagus sp. PR1] Length = 445 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 27/339 (7%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPNL 112 L V IAL+ NL + ++ A + +L + +PS A S F NL Sbjct: 32 LETAVAIALENNLNLERSELNQLANEATLLQNKGARYPSLSAGGSTNFNWGRSINPATNL 91 Query: 113 -KTNSTG--QLDSDWKIDLFGQRR---HIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 +T G L++ + LF R +I + L+ ++ K +I +I +YI+ Sbjct: 92 FETQRIGNINLNASSNVTLFNAGRITNNINQTKVTLEQGLYNIEATKNTIILNVINNYIN 151 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E++ IA L++ +E + G+ + L++++ + D+ + + Sbjct: 152 VVFNQEQVKIAESQLNVTNDQLERTIKLVEAGSLPYSDQLDLQSQLATNNVDLINAKATL 211 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRPDIRYQEKKL 285 ++ ++ L P TE +QK + + + D+ + P+I+ L Sbjct: 212 NTSLLTLAQALQIPFTEDFQ-IQKPDLDVDDTFMVTESSASIYDVALETMPEIK--AASL 268 Query: 286 ADSVAKIGI--AKSDLYPSLSLNGSIALT----HDNSFP---GYNTHWSFGPKLYLPIFD 336 S+A GI AK+ YP+L++ ++ +D F +N S G +L +P+F Sbjct: 269 GVSIADYGIKLAKAGYYPTLAIGANLGTNYVDIYDEKFADQIDFNFSQSAGLQLSIPLFS 328 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + K+ ++RA + +T ET +++E A T+ Sbjct: 329 RMNNKAAVQRANVQKRLAEVTELETKNQLRQDIETAYTN 367 >gi|320176624|gb|EFW51666.1| RND efflux system, outer membrane lipoprotein, NodT family [Shigella dysenteriae CDC 74-1112] Length = 362 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 64/350 (18%), Positives = 142/350 (40%), Gaps = 27/350 (7%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS + V+ + + + ++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSSVDGVETDINASKTRQQLNDVAGKMKIIEAR 144 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLADS 288 +S L + Q +S +P + +P +L + R D++ + S Sbjct: 145 LSALTNH---------QTKSLKLKPVALPKVASQLPDELGYSLLAQRADLQAAHWYVESS 195 Query: 289 VAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 ++ I AK+ YP ++L + AL + F L LPIFD G++ +N+ Sbjct: 196 LSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLD 255 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 256 IAKAESNLSITSYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVGLA 310 Query: 406 QGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 311 QARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|307294646|ref|ZP_07574488.1| type I secretion outer membrane protein, TolC family [Sphingobium chlorophenolicum L-1] gi|306879120|gb|EFN10338.1| type I secretion outer membrane protein, TolC family [Sphingobium chlorophenolicum L-1] Length = 467 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 64/330 (19%), Positives = 132/330 (40%), Gaps = 28/330 (8%) Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 R I+++ + + A + + +V S+++ +Y+D +S+ + + N++ + Sbjct: 91 RNGIQAAKTRVAAGQADLRGTEASVFSQVVAAYMDVIRNAAVVSLNQANVRALEVNLQAT 150 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 +F G ++ + + E+ + SD+ E + N L+G Sbjct: 151 GDRFEVGDVTRTDVAQSESRLALARSDLQNAEANLITARENYIALVGEAPDNLEPPPPLP 210 Query: 252 SNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS------- 304 P+ + + +++ PDI +K + AK + P++S Sbjct: 211 GLPATPDSAVQV-------ALKDNPDILAAKKLREAQHFDVRAAKGTVLPTVSAFTQAGY 263 Query: 305 LNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQET 361 N LT + N S G +L +P + G+ + +RR ES A E+ I + Sbjct: 264 TNYLDTLTSSATGSQINKQASAGVQLNIPFYQGGRPAAQVRRNQALESQALEREIEVERG 323 Query: 362 VLNAIKEV----ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 V+ + + +L SI ++K V ++E + S+ G ++LDIL+ Sbjct: 324 VIAQTRSAYASWQASLESIQSNQKAVDAANLSLEGVRAENSV-------GSRTILDILNA 376 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 E+ +V L A+R + L A+G Sbjct: 377 EQEAVNAKVQLVTARRNAYVAGFSLLAAMG 406 >gi|325525933|gb|EGD03629.1| outer membrane efflux protein [Burkholderia sp. TJI49] Length = 175 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 8/89 (8%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW +ND LN L+ Sbjct: 27 GCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPAD--RADRGPWWTVYNDPQLNALIDKLNA 84 Query: 71 QNLTILQATERINAAKENILSVRADLFPS 99 N TI Q+ A+ + RA FP+ Sbjct: 85 SNQTIAQSAAAYRQARALVTEARAAYFPT 113 >gi|73856139|gb|AAZ88846.1| putative channel/filament proteins [Shigella sonnei Ss046] Length = 398 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 146/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 61 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 120 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 121 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 169 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 170 VAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 229 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 230 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 289 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 290 LNIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 344 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I+ + A++ + + + Q + + L A+G GY Sbjct: 345 LAQARFNAGIIVGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 396 >gi|83950548|ref|ZP_00959281.1| type I secretion outer membrane protein, TolC family protein [Roseovarius nubinhibens ISM] gi|83838447|gb|EAP77743.1| type I secretion outer membrane protein, TolC family protein [Roseovarius nubinhibens ISM] Length = 477 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 21/181 (11%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 +R+ PD+ + +A + + A++ P+++LNGS+ + + + Y+ S G +L Sbjct: 255 LRHHPDMIKTQHDIAAAELLVQAAEAATRPTVTLNGSLGVNDEFNSSSYSHAGSVGVQLS 314 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 PI+ G++ S +RRA + Q Q + ++++ ++ I+ Q VE Sbjct: 315 GPIYQGGRLSSQVRRAVAQRDAQR-GLQHVIRHSVQ------ANVGNAYAILRAAQSQVE 367 Query: 392 LHKKSMSLSMINYRQ-------GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + + + + +R G + LD+L+ E+ +L A+ L + D+YI Sbjct: 368 SGQSQIRAARVAFRGVQEEAKLGSRTTLDVLNAEQ-------ELLNAQSTLISAQSDVYI 420 Query: 445 A 445 A Sbjct: 421 A 421 >gi|166713337|ref|ZP_02244544.1| TolC [Xanthomonas oryzae pv. oryzicola BLS256] Length = 443 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 40/209 (19%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHW--- 324 A I + P +R Q+ +++ + A++ A++ P+L+L+GS+ T+ G +T Sbjct: 222 ATAIADNPALRAQQLQVSAAEAQVSAARAGHLPTLNLSGSMGRTNSWGGGSGVDTAAGNF 281 Query: 325 ----------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------E 360 S G L +PIF G +S +R+A S Q T++ + Sbjct: 282 MTNNGNIDTNSIGVTLSIPIFSGGATQSAVRQALSQRDIQQDTYEQQKRALDRNTRNAYQ 341 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYS 410 TV+ I EVE ++ + Q +E+ +++++ + +NY Q RY+ Sbjct: 342 TVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYT 401 Query: 411 LL-DILDIERATAKVEV-DLSIAKRQLAK 437 L + L + +A K+++ DL R L++ Sbjct: 402 FLQNRLLLGQAIGKLDITDLQDVNRLLSQ 430 >gi|189463762|ref|ZP_03012547.1| hypothetical protein BACINT_00095 [Bacteroides intestinalis DSM 17393] gi|189438712|gb|EDV07697.1| hypothetical protein BACINT_00095 [Bacteroides intestinalis DSM 17393] Length = 465 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/250 (18%), Positives = 111/250 (44%), Gaps = 18/250 (7%) Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 +G +K + ++ ++ E + +E ++ + L G + + ++ N+ Sbjct: 204 IAEGVATKADGLSVKVKVNEAEMTLTKVEDGLSLSRMLLCQLCGLDLSSPIILKDEKGND 263 Query: 255 FQPNLYIPINI-GIPADLI-RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 +P+ P+ GI + + RP++R E K+ + +S+ PSL+L GS +T Sbjct: 264 LKPD---PVAANGIDLNTVYATRPEVRSLELATEIYKQKVNVTRSEYLPSLALMGSYMMT 320 Query: 313 HDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + + F G+ W+ G L +PI+ G+ ++ A++ A+ + + Sbjct: 321 NPSVFNGFEKKFKGMWNVGVVLQVPIWHWGEGMYKVKAAKAEARIAQYQLDDAKEKIELQ 380 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI---------ER 419 V ++ +NE K + + +E +++ + + + +G + ++L+ E+ Sbjct: 381 VNQSVFKVNEAAKKLIMAEKNLEKADENLRYATLGFEEGVIAASNVLEAHTAWLSAQSEK 440 Query: 420 ATAKVEVDLS 429 A+++V L+ Sbjct: 441 IDAQIDVKLT 450 >gi|92114748|ref|YP_574676.1| Type I secretion outer membrane protein, TolC [Chromohalobacter salexigens DSM 3043] gi|91797838|gb|ABE59977.1| Type I secretion outer membrane protein, TolC [Chromohalobacter salexigens DSM 3043] Length = 489 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 2/178 (1%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS--FPGYNTHWSFGPK 329 I N P+++ + ++ S A++ A++ P+LS + T + G+N G + Sbjct: 262 IANNPNVQAAQAAVSVSRAEVDQAEAGHKPTLSAFANYNYTDSDQDYLDGHNEDTQVGLQ 321 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 LPI+ G + +R+ S + ++ + ++V + T + D + V + A Sbjct: 322 ATLPIYSGGTTSAQVRQQTYSLEATQYDFEAQRRDTTQQVRSLFTQVMNDVESVDAQRQA 381 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + ++ ++ + Y G +++D+LD E++ + D + A+ V+L G Sbjct: 382 IVSNRSALEATRSGYEVGTRNIVDVLDAEQSLYQAIADYADARYTYVTDMVELRQQAG 439 >gi|254523309|ref|ZP_05135364.1| TolC protein [Stenotrophomonas sp. SKA14] gi|219720900|gb|EED39425.1| TolC protein [Stenotrophomonas sp. SKA14] Length = 452 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 21/194 (10%) Query: 254 NFQPNLYIPINIGIPADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS- 308 +F+P +P N G +L+ P ++ QE K++ + A + A+ YP+LSL GS Sbjct: 224 DFRPE--VPANRGNIDELVHQATNQNPALKAQELKVSAAEASVQAARGGHYPTLSLGGSW 281 Query: 309 --IALTHDNSF-----PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS---AQEQYITW 358 A D++ P T+ S G L +PIF G +S +R+A + AQ+ Y Sbjct: 282 GKSATWGDSTGAGSLSPDARTN-SIGLTLSVPIFSGGATQSGVRQALAQRDIAQDGY-EQ 339 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+ L+ + NA ++ + V + AV + + S + G ++LD++ + Sbjct: 340 QKRALD--RNTRNAYQTLVQGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLDVIQNQ 397 Query: 419 RATAKVEVDLSIAK 432 R ++D + A+ Sbjct: 398 RILFSAQLDYANAR 411 >gi|15965267|ref|NP_385620.1| putative outer membrane secretion protein [Sinorhizobium meliloti 1021] gi|307309290|ref|ZP_07588958.1| type I secretion outer membrane protein, TolC family [Sinorhizobium meliloti BL225C] gi|15074447|emb|CAC46093.1| Putative outer membrane secretion protein [Sinorhizobium meliloti 1021] gi|306900291|gb|EFN30908.1| type I secretion outer membrane protein, TolC family [Sinorhizobium meliloti BL225C] Length = 456 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 67/330 (20%), Positives = 140/330 (42%), Gaps = 48/330 (14%) Query: 127 DLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 D F ++ ++ A++ S+ + ++ ++ SY + ++ +SI Q L ++ Sbjct: 105 DGFQTLNNVRAAQADVFSSRETLKANEIQILLSAAQSYANIARDQQVVSIRRQNLAFLRE 164 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIES----DIPTLEKSFRMNVHNISTLLGYPAT 242 + + + G ++ + + EAE+ + +S I L++S + V ++G T Sbjct: 165 QLSAAQARLEVGEGTRTDVSQAEAELANAQSLLVAAIAQLKQSEAVYVQ----IVGAAPT 220 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIA 295 QP P +P L +R P I + + + ++ A Sbjct: 221 GI----------RQPG---PATKAMPRSLDQAVATGLRENPQILAAQYAVDSAGYQVKSA 267 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 + + P + L G+++ N+ G +T S +L +PI+ G IR+A+ +Q Sbjct: 268 EGTMLPGVVLQGAVSRNTGNAGQGLDDTTASVTARLEVPIYQGGAEYGQIRQAKEILGQQ 327 Query: 355 YI-------TWQETVLNAIKEVENALTSINEDKKIVT----KLQHAVELHK--KSMSLSM 401 I + Q+TV++A ++E+AL I + + L+ VE K + +L + Sbjct: 328 RILVDSARASVQQTVVSAHAQLESALARIRASRSQIAAANLALEGVVEERKVGQRTTLDV 387 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIA 431 + +Q D+LD + A A + D +A Sbjct: 388 LISQQ------DVLDAQEALAGAQRDAVVA 411 >gi|308750959|gb|ADO44442.1| outer membrane efflux protein [Hydrogenobacter thermophilus TK-6] Length = 409 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 77/385 (20%), Positives = 164/385 (42%), Gaps = 53/385 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + +AL+ N + + + +E+I RA + P S+S+ + K+ + G Sbjct: 19 TLEEAINVALKNNTQVKLSELDLKRVEEDIRKARAGILPQ--VSLSYSYTKLDKSLAFGF 76 Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI----------DARH 169 ++ + +F + I D A D KL+ ++K + +YI + Sbjct: 77 TPTERQSYVFEVNQSI------FDKAV--FDAIKLSKLAKDLQAYILEDIKRTVENQTKQ 128 Query: 170 FKERISIAHQILDLYKKNI-----ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +++ LY+ N+ +L+ +++ G ++L++ +A++++ E+ Sbjct: 129 LFYALLYKKEVVKLYQDNLREENYKLTKVQYEAGVVPMVNLLRSKAQLQTAEAQYQQALA 188 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPN---LYIPINIGIPA--DLIRNRPDIR 279 ++ ++ + L + + QP + P P L+ R Sbjct: 189 DYKKSLEDFKAYLRWEG------------DIQPEGSLEFKPFQEDYPTLRKLLLERNSTL 236 Query: 280 YQEKKLADSVAK-IGIAKSDLYPSLSLNGSIAL---THDNSFPGYNTHW----SFGPKLY 331 KK + K I +AK YP++S G + T S G T W +FG +L Sbjct: 237 LVAKKSVEVYEKRIDVAKDAYYPTIS--GFVTYQGNTGRRSLSG-GTEWIRGYTFGFQLN 293 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +FD + ++NI +A +Q + +T+ +++ L IN K + L+ ++E Sbjct: 294 YHLFDGFQREANIAQANIDYLKQKEVYIDTLYTQDAQMKKTLEDINSLKAQIRALESSLE 353 Query: 392 LHKKSMSLSMINYRQGRYSLLDILD 416 K+++ LS YR G + L++L+ Sbjct: 354 AAKEALRLSTERYRYGVTNQLEVLE 378 >gi|110598282|ref|ZP_01386557.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] gi|110340090|gb|EAT58590.1| Outer membrane efflux protein [Chlorobium ferrooxidans DSM 13031] Length = 441 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 80/405 (19%), Positives = 156/405 (38%), Gaps = 38/405 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH------------- 106 +L K + + + + + A E I AA + R+ FP AS + Sbjct: 36 TLEKTIGLVRENHPALKAAAEEITAADARVTKSRSTWFPQITASAGYTYIDPVSEMSFGG 95 Query: 107 ----RFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLI 161 +F+PN N ++ + I FG+R + +E +L+ SA ++I++ + + I Sbjct: 96 SAPIKFMPN--NNYDAKVTARATIFDFGKRGNGVELALSGKRSAEHALEISRRELSWQSI 153 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 + E I + + + K ++ S ++ G+ ++ L+ E I + S Sbjct: 154 QLFYGNLLLHESIRVEQKEIAALNKALDFSTKRYQAGSATRFDLLSTEVRIAAARSRALD 213 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 L + R N + L G L + +F G+ A ++ R +++ Sbjct: 214 LAHALRRNELALRRLTGIADNGPLTL----NGSFSVTPSAARETGMVAQALQQRLEVKLS 269 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPIFDK 337 + + K IA + P ++ GS + N + + + G L +PIF Sbjct: 270 IENEKSASQKRSIAIKEGMPVIT--GSASYGRSNGYQPDIEAMRNNIAAGLHLEIPIFSG 327 Query: 338 GKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 ++ R E++A T + +T EVE L + K + V K Sbjct: 328 --FRNRAERQEATALMHAATLRRLDTEQQVKNEVEEMLDGVQTSSKKLLTTDAQVNQAKL 385 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + + + G + LD+LD E + ++ E +A+ Q YV Sbjct: 386 AAEHARARFENGMATTLDLLDTEASLSQAE----LARLQATYEYV 426 >gi|218674135|ref|ZP_03523804.1| hypothetical protein RetlG_22692 [Rhizobium etli GR56] Length = 105 Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 43/80 (53%) Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 A +S++ D KIV L + ++ ++LS+ GR SL D+LD + + A + L A Sbjct: 13 AFSSVHRDAKIVQALSAQMMTAQEPLALSIGREEDGRSSLPDVLDAQHSAATSQASLVQA 72 Query: 432 KRQLAKSYVDLYIAIGSGYN 451 +Q + L +AIGS YN Sbjct: 73 VQQKGDGSIVLNVAIGSSYN 92 >gi|325269051|ref|ZP_08135672.1| hypothetical protein HMPREF9141_0881 [Prevotella multiformis DSM 16608] gi|324988672|gb|EGC20634.1| hypothetical protein HMPREF9141_0881 [Prevotella multiformis DSM 16608] Length = 511 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/185 (20%), Positives = 87/185 (47%), Gaps = 11/185 (5%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----W 324 AD I +RP++R + + S + +S P + L G +L++ N F G+ W Sbjct: 327 ADSIESRPELRLLQNAIDLSRQNTKLVRSLYLPHILLTGGYSLSNPNLFNGFQKRFTDLW 386 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + G + +PI+ G+ + +R + ++ + ++ E+E + + K + Sbjct: 387 NIGVTVQVPIWTWGENRYKVRASRTTTSIARLELEDARKKIDLEIEQNRLRLKDTNKQLA 446 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK-----VEVDLSIAKRQLAK 437 +E ++++ + I +++G ++ D++ + A TAK E+++ +A+ L K Sbjct: 447 TAHKNMEAAEENLRCANIGFKEGVMTVTDVMTAQTAWHTAKTAIIDAEINVRLAQTGLQK 506 Query: 438 SYVDL 442 + +L Sbjct: 507 ALGNL 511 >gi|310820426|ref|YP_003952784.1| outer membrane efflux family protein [Stigmatella aurantiaca DW4/3-1] gi|309393498|gb|ADO70957.1| Outer membrane efflux family protein [Stigmatella aurantiaca DW4/3-1] Length = 470 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 59/301 (19%), Positives = 126/301 (41%), Gaps = 17/301 (5%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L V + +Y A KE + +A Q L +K++ + G ++ L + + Sbjct: 178 LQVALAVRSTYFTAHVDKELVEVARQTLHNLEKHLMQTEGMVAVGTAPEIDLAQARTNLA 237 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY-MQKQSNNFQPNLYIPINIGIPADLI 272 + + + + E ++ ++ +G+ T L Y + ++ + PI + + A + Sbjct: 238 TGRAQLVSAENAYLTAKALLNQAVGW--TLNLDYEVADRTVDPVEGEDSPIEV-LEAAAL 294 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----HWSFGP 328 ++RP++ +++L + + K P+LS N S+ PG W+ Sbjct: 295 KSRPELASLQRQLDAQLLTVRAIKGGYAPTLSGNLSVT-------PGGTALDSLSWNVAG 347 Query: 329 KLYL--PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L L P+F G ++ +R AE+ A++ + + ++E A ++ K +++ Sbjct: 348 GLSLTWPLFQGGMTRAQVREAEAVAEQLSAQIDQERMQVRVDLEQARLAVRAAKALLSAQ 407 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 AV + + L+ Y +G + ++I D + A E QLA + L A+ Sbjct: 408 LDAVVNARDQLRLAEGRYAEGVGNGIEIGDAQVALTSAEAQQVQTDGQLATARAQLLYAL 467 Query: 447 G 447 G Sbjct: 468 G 468 >gi|189423298|ref|YP_001950475.1| outer membrane efflux protein [Geobacter lovleyi SZ] gi|189419557|gb|ACD93955.1| outer membrane efflux protein [Geobacter lovleyi SZ] Length = 419 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 1/127 (0%) Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 AKS P LS SI D FP W G L +P+F +R A ++ Sbjct: 266 AKSSYLPILSGVASIGYA-DRDFPPTGNVWEVGLNLTVPLFSGFSSVEQVREAAAAMNSI 324 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 L IKEVE+A N+ + Q V+ +S SL+ Y++G S++++ Sbjct: 325 EARQNNLKLQIIKEVESAWFGGNDAAARMISTQKEVDAANESKSLAEGRYQEGVGSIIEV 384 Query: 415 LDIERAT 421 D + T Sbjct: 385 TDAQSQT 391 >gi|255037909|ref|YP_003088530.1| outer membrane efflux protein [Dyadobacter fermentans DSM 18053] gi|254950665|gb|ACT95365.1| outer membrane efflux protein [Dyadobacter fermentans DSM 18053] Length = 443 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 69/347 (19%), Positives = 147/347 (42%), Gaps = 22/347 (6%) Query: 83 NAAKENILSVRADLFPSSYASISHRFIP---NLKTNSTGQLDSDWKIDLFGQRR--HIES 137 NA+ ++ L +++ + P + R + ++N++ Q+D +F Q I++ Sbjct: 69 NASLDDNLKLQSTVLPGALFGGEDRRVALGTKYQSNASAQVDQV----VFDQAMLIGIKA 124 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 + N +A K +I + +Y +++I++ LD + + L+ Sbjct: 125 NKPNQQNAVLNSQRTKETIIYNVANAYYQVFVTQQQIALLKDNLDKTSQILGTLKLQLDN 184 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G K+ + + + +I+S + E + ++ + + +G P TE L Sbjct: 185 GVIKKVDYDRTQVNLNNIKSQLTLAESNLTLSENQLKFQMGMPLTEPLVLADNP------ 238 Query: 258 NLYIPINIGIPADL-IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTH 313 L P + P N D + Q + + K+ P +S+ G AL + Sbjct: 239 -LEQPFKLVEPGAFEASNLTDFKIQNLNMELQELEKARIKAGYLPKVSVYGRYGVQALGN 297 Query: 314 D--NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 D S+ + ++ + G KL +PIFD + + ++A+ + Q + V N + N Sbjct: 298 DLGTSWGNWFSYGAIGLKLSIPIFDSFRRDAQFKQADLNLMTQKEQLKLNVQNYELQNSN 357 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ALT + + K + ++ V L K+ ++ + Y++G L D+L+ E Sbjct: 358 ALTQLQKAKSNLASDENNVNLAKEVYDVTTLQYKEGTVPLTDLLNAE 404 >gi|149203823|ref|ZP_01880792.1| type I secretion outer membrane protein, TolC family [Roseovarius sp. TM1035] gi|149142940|gb|EDM30982.1| type I secretion outer membrane protein, TolC family [Roseovarius sp. TM1035] Length = 468 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/290 (17%), Positives = 115/290 (39%), Gaps = 24/290 (8%) Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + +Y++ +E + + L L ++ + + +F G ++ + + E+ + +S + Sbjct: 142 VQAYMNVIRNQEFVDLRQNNLRLLREELRAAQDRFEVGEVTRTDVAQAESAVALAQSGLA 201 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-----PNLYIPINIGIPADLIRNR 275 + + EF + + + Q P L ++ A L R Sbjct: 202 AAQGDLTRAIE-----------EFREAIGRDPGSLQTPSELPQLGENVDAAKAAAL-RRH 249 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PD+ + +A + I A++ L P+L+L + + + + S G ++ PI+ Sbjct: 250 PDLLQAQHNVAAAELNIRAAEAALLPTLNLTARVGASEELDGSDMSRTGSLGVEMRGPIY 309 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 G++ S R+A + Q L ++V ++ ++ + T + AV + Sbjct: 310 RGGRLTSQQRQAMAQRDAQLALLHLAGLQVKQDVGDSYANLRAARASRTASREAVRAAQV 369 Query: 396 SMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + G + LD+LD E+ DL A+ L + D+ IA Sbjct: 370 AFDGTREEATLGARTTLDVLDAEQ-------DLLDARANLISANADVVIA 412 >gi|194367115|ref|YP_002029725.1| type I secretion outer membrane protein, TolC family [Stenotrophomonas maltophilia R551-3] gi|194349919|gb|ACF53042.1| type I secretion outer membrane protein, TolC family [Stenotrophomonas maltophilia R551-3] Length = 452 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 21/194 (10%) Query: 254 NFQPNLYIPINIGIPADLIR----NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS- 308 +F+P +P N G +L+ P ++ QE K++ + A + A+ YP+LSL GS Sbjct: 224 DFRPE--VPANRGNIDELVHQATTGNPALKAQELKVSAAEAGVQAARGGHYPTLSLGGSW 281 Query: 309 --IALTHDNSFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESS---AQEQYITW 358 A D++ G T+ S G L +PIF G +S +R+A + AQ+ Y Sbjct: 282 GKSATWGDSTGAGSLSPDARTN-SIGLTLSVPIFAGGATQSGVRQALAQRDIAQDGY-EQ 339 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 Q+ L+ + NA ++ + V + AV + + S + G ++LD++ + Sbjct: 340 QKRALD--RNTRNAYQTLVQGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLDVIQNQ 397 Query: 419 RATAKVEVDLSIAK 432 R ++D + A+ Sbjct: 398 RILFSAQLDYAQAR 411 >gi|330884109|gb|EGH18258.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 84 Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNL--INIDTLKWWESFNDTSLNKLVKIALQQNLT 74 C VGP+Y P +P Q + N +DT+ WW+ F D +LNKLV +L N Sbjct: 1 ACAVGPDYKAP--VTVPAQLASAAQGNYDRSKVDTV-WWQQFEDPTLNKLVARSLDGNRD 57 Query: 75 ILQATERINAAKENILSVRADLFP 98 + A R+ AA+ V D P Sbjct: 58 LRVAFARLKAARAIRDDVANDAMP 81 >gi|294012495|ref|YP_003545955.1| TolC-like protein [Sphingobium japonicum UT26S] gi|292675825|dbj|BAI97343.1| TolC-like protein [Sphingobium japonicum UT26S] Length = 488 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 64/315 (20%), Positives = 122/315 (38%), Gaps = 22/315 (6%) Query: 145 AYAQVDI--AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 A Q D+ + +V S+++ +Y+D +++ + + N++ + +F G ++ Sbjct: 123 AAGQADLRGTEASVFSQVVAAYMDVIRNSAVVALNQANVRALEVNLQATGDRFEVGDVTR 182 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + + E+ + SD+ E + N L+G P + Sbjct: 183 TDVAQSESRLALARSDLQNAEANLITARENYIALVGEAPDNLEPPPPLPGLPATPESAVQ 242 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS-------LNGSIALTHDN 315 + +++ PDI +K + AK + P++S N LT Sbjct: 243 V-------ALKDNPDILAAQKLREAQQFDVRAAKGTVLPTVSAFTQAGYTNYLDTLTSSA 295 Query: 316 SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVENA 372 + N S G +L +P + G+ + +RR ES A E+ I + V I + +A Sbjct: 296 TGSQINKQASAGVQLNIPFYQGGRPAAQVRRNQALESQALEREIEVERGV---IAQTRSA 352 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 S + + Q AVE S+ G ++LDIL+ E+ +V L A+ Sbjct: 353 YASWQASLESIQSNQKAVEAANLSLEGVRAENSVGSRTILDILNAEQEAVNAKVQLVTAR 412 Query: 433 RQLAKSYVDLYIAIG 447 R + L A+G Sbjct: 413 RNAYVAGFSLLAAMG 427 >gi|213963734|ref|ZP_03391984.1| outer membrane efflux protein [Capnocytophaga sputigena Capno] gi|213953614|gb|EEB64946.1| outer membrane efflux protein [Capnocytophaga sputigena Capno] Length = 448 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 64/313 (20%), Positives = 130/313 (41%), Gaps = 48/313 (15%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 ++I K+ +Y ++ + L L +K + G + K+ L + + + Sbjct: 147 DIIEKVAKAYYQVYQTRQTLENIESNLALTEKTANVVKGLNQSGLSKKIDLDRTTVAVNN 206 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 ++S +++ + + ++G P E + ++ F+ N + + G N Sbjct: 207 LKSARQQALNGLQLSENALKYMIGMPMNEAITLPKE---GFEANYDLAFDKGN----TNN 259 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK----- 329 R +++ EK+ + + ++ LYPSL+L + GY S GPK Sbjct: 260 RIELQVLEKQKQLLDINVKVQRAALYPSLALQATY---------GY---LSMGPKTPIFY 307 Query: 330 -----------------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 L +PIF ++ IR+A+ +Q T ++T L ENA Sbjct: 308 GKKDKVYGSDYSAITLGLNIPIFSGFGTRAKIRQAQIESQALEATLKDTRLAMDLAYENA 367 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE------- 425 + + + + + V+L ++ + + NYRQG SL D+L+ ER+ + + Sbjct: 368 RSQLTNNLLTIDSQKENVKLAEEVLLNTQNNYRQGLASLTDLLEAERSLSDAKNNYTTAL 427 Query: 426 VDLSIAKRQLAKS 438 +D +A+ +L KS Sbjct: 428 LDYKLAEIELLKS 440 >gi|51014240|dbj|BAD35012.1| outer membrane component of efflux pump [Chromohalobacter sp. 160] Length = 490 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/196 (19%), Positives = 88/196 (44%), Gaps = 9/196 (4%) Query: 261 IPINIGIPAD-------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL--NGSIAL 311 IPI PA I N P+++ + + S A++ A++ P+LS N + + Sbjct: 247 IPIASPEPAGRDNWIQMAIANNPNVQAAQAAVDVSQAEVEQAEAGHKPTLSAFANYNYSD 306 Query: 312 THDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 + + + G+N + G LPI+ G+ + +R+ + + ++ + ++V + Sbjct: 307 SDQDVYEGHNANTEVGLTATLPIYSGGRTSAQVRQQTYTLEATQYDYEAQRRDTTQQVRS 366 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 T + D + V + A+ ++ ++ + Y G +++D+LD E++ + D + A Sbjct: 367 LFTQVMNDVESVEAQRQAIVSNRSALEATRSGYEVGTRNIVDVLDAEQSLYQAISDYADA 426 Query: 432 KRQLAKSYVDLYIAIG 447 + V+L G Sbjct: 427 RYTYVTDMVELRQQAG 442 >gi|227821915|ref|YP_002825885.1| putative TolC outer membrane protein [Sinorhizobium fredii NGR234] gi|227340914|gb|ACP25132.1| putative TolC outer membrane protein [Sinorhizobium fredii NGR234] Length = 456 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 38/302 (12%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SY + ++ ++I Q L ++ + + + G ++ + + +AE+ + +S + T Sbjct: 140 SYANIARDQQIVAIRRQNLAFLREQLNAAQARLDVGEGTRTDVSQADAELANAQSLLVTA 199 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNR 275 + + ++G T QP P +P L +R Sbjct: 200 IAQLKQSEAVYVQIVGDAPTGI----------RQPR---PATKAMPRSLDQAVATGLREN 246 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY--NTHWSFGPKLYLP 333 P I + + + ++ A+ + P + L GS+ NS +T S +L +P Sbjct: 247 PQILAAQYNVDSAGFQVKSAEGTMLPGVVLQGSVTRNTGNSGTAGLDDTTASVTARLEVP 306 Query: 334 IFDKGKIKSNIRRAESSAQEQYI-------TWQETVLNAIKEVENALTSINEDKKIVTKL 386 I+ G IR+A+ +Q I + Q+TV++A ++E+AL I + ++ Sbjct: 307 IYQGGAEYGQIRQAKEVLGQQRILVDSARASVQQTVVSAHAQLESALARITASRSQISAA 366 Query: 387 QHAVELHKKSMSLSMINYRQ-GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 A+E +I R+ G+ + LD+LD ++ + L+ A+R + L A Sbjct: 367 NLALE--------GVIEERKVGQRTTLDVLDSQQDVLDAQEALAAAQRDAVVASYALLAA 418 Query: 446 IG 447 +G Sbjct: 419 MG 420 >gi|116750799|ref|YP_847486.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] gi|116699863|gb|ABK19051.1| outer membrane efflux protein [Syntrophobacter fumaroxidans MPOB] Length = 498 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 83/414 (20%), Positives = 155/414 (37%), Gaps = 53/414 (12%) Query: 5 RAIFSLFIVLLAGCTVGPEYTK--------PHMP-----LLPTQFSIGNSKNLINIDTLK 51 RA+F + ++A TV T P +P L PT S+ +S TL Sbjct: 18 RAVFLYVLGVIAAITVSGCSTTGDSAPNANPALPIESPVLPPTAPSMEDSAG--KGGTL- 74 Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------------ 99 ++++ ++ AL + + QA R+ AA E + A +P Sbjct: 75 --------TVDRAIQEALSVSPELDQARSRVAAAGEQVRQAEAMFYPRIVLSQEYNTTDN 126 Query: 100 -SYASI----SHRFIPNLKTNSTGQ-------LDSDWKIDLFGQRRHIESSLANLDSAYA 147 YA + RF P + N G+ +W + G RR S+ N A Sbjct: 127 PVYALMYIINQRRFQPTIAFNDPGRQHDVVSSAQGEWALFEGGSRRFDRSAALNQRRAQQ 186 Query: 148 QVDIAKLN-VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLV 206 A N +++++ +Y I +A + L+ + + L ++ ++ Sbjct: 187 DEVFAMRNQLVARVTETYYQWLQSLVFIDVAEKTLEAAQLDQRLGEARYKAEMALPSEVL 246 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG 266 +L+A + + T + S R + L+ T+ + + ++ +P L Sbjct: 247 RLKARTAEVRGSLVTAKSSARRFQAALERLIARSITQG-EIPRPELSSDEPPLSAAAEDA 305 Query: 267 --IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 + A + RP++ + + ++ A+ L P LS + + G + W Sbjct: 306 DALVAQALNRRPEMAAIRSMVLAAGDRVKSARGGLLPKLSTSARYQWDSEEIVDGEGS-W 364 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 FG + PIF+ G S I A S QE ++ L+ EV+ A ++ E Sbjct: 365 MFGIQAAWPIFEGGMTWSRIAEARSRLQEVQAKGRQIALDIALEVQQAALAVQE 418 >gi|301061895|ref|ZP_07202625.1| outer membrane efflux protein [delta proteobacterium NaphS2] gi|300443999|gb|EFK08034.1| outer membrane efflux protein [delta proteobacterium NaphS2] Length = 518 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 78/391 (19%), Positives = 164/391 (41%), Gaps = 41/391 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLF---------------PSSYA-- 102 +L +++IALQ N + A RI + E +L F PS+Y Sbjct: 81 TLQTVIQIALQNNPDMDMAVARIGQS-EALLDEAQSAFWPVIGVYGEYLQGNAPSAYLFN 139 Query: 103 SISHRFIP-NLKTNSTGQLDS-----DWKIDLF-GQRRHIESSLANLDSAYAQVDIAKL- 154 +I R +P N+ G ++ + +LF G R ++ +A A +++D + Sbjct: 140 TIDQRKLPPGTDFNNPGWFENYEAGVHGRWNLFNGGRDYLRKRMAETGLAISRLDRKSIQ 199 Query: 155 -NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 ++S +I +Y + I I+ KK +++ +++ G K ++ L+ + Sbjct: 200 NGLVSSVIHAYFSVLAAERYIDISLDSRKTVKKELDMVTVRYEAGGALKSDVLSLKVALA 259 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E D+ + + ++V +++ LLG P ++Q+ P+ Y I A Sbjct: 260 RAEEDLIRAQNNHSLSVSSLANLLGLNPDMHITLAREQQTPINVPDSYEKALIVAMA--- 316 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-----THWSFG 327 NRP+++ ++ S + +A+S+ P L+ + D+ PG++ +W+ G Sbjct: 317 -NRPELQQSRLQVVRSRMDLDVARSEYLP--RLDAQMKTYFDD--PGFDFEWDRKNWTAG 371 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L +F + S++ RA + +E ++ L +++ + E K + Sbjct: 372 VILNWDLFTGFRRASHVDRARAVMKEMLAADRKATLAVQLQLKGSYMKYTEAKARWRVSR 431 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +V ++S+ L Y G ++ L+ E Sbjct: 432 ASVAASEESLRLVEKQYAGGSATITRYLEAE 462 >gi|163759466|ref|ZP_02166551.1| putative outer membrane secretion protein [Hoeflea phototrophica DFL-43] gi|162283063|gb|EDQ33349.1| putative outer membrane secretion protein [Hoeflea phototrophica DFL-43] Length = 462 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYL 332 N PD+ L + + IAKS P++S A+T + G+ T+ S G + Sbjct: 57 NNPDLNAARAGLRATDEGVAIAKSGYRPTISAE---AVTTSTNTEGFTTNSASIGATISQ 113 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD + ++N+R AE+ + T ++ + A ++N DK+IV Q + Sbjct: 114 TLFDGFQTRNNVRAAEAQVFAGRENLRGTEIDTLLAAVQAYANLNRDKQIVVYRQQNIAF 173 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIE 418 ++ +S + + G + D+ E Sbjct: 174 LQEQLSAARARFDVGESTRTDVSQAE 199 >gi|189499258|ref|YP_001958728.1| outer membrane efflux protein [Chlorobium phaeobacteroides BS1] gi|189494699|gb|ACE03247.1| outer membrane efflux protein [Chlorobium phaeobacteroides BS1] Length = 441 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%) Query: 313 HDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 +D+ FPG + H W+ G + I+D G+ + A++S E ++E + EV + Sbjct: 305 NDDFFPGLDEHSWTLGLNMSWTIYDGGRQPGREQEAKASELESRYAYEEARDRSRFEVRH 364 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 AL SI+ K + +A++ S+ + YR G ++L E+A ++ L+ A Sbjct: 365 ALRSISTAKSRIAVAGNALKEAGLSLDYTGERYRSGMAMTFELLGREQAYTYAQMRLNKA 424 Query: 432 KRQL--AKSYVDLYIA 445 + L A+S ++ Y Sbjct: 425 RYDLIVAESLLEYYTG 440 >gi|207724273|ref|YP_002254670.1| outer membrane cation efflux system protein [Ralstonia solanacearum MolK2] gi|206589489|emb|CAQ36450.1| outer membrane cation efflux system protein [Ralstonia solanacearum MolK2] Length = 452 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 17/172 (9%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PD+ + ++ A++ ++ +PSL+L GS+ + P G + +P+F Sbjct: 285 PDLEADRAAVREAEARLAHERTQRWPSLALRGSV-----DRQPDLQDS-RVGLVMSIPLF 338 Query: 336 DK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 D+ G+ +++ RA + +++ + ++ V +A ++ E A + ++ + V K Sbjct: 339 DRREGPVGEAVASLERARAVLRDRELQMRQAVESAYRQYEIAQSQVSALESGVVKQ---- 394 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + ++ ++ YR G +LD LD +R + DL A+ L + V+L Sbjct: 395 --AESALRVAEAAYRHGERGILDYLDAQRVFRQARNDLIAARADLRTAAVEL 444 >gi|108757618|ref|YP_629246.1| putative cobalt-zinc-cadmium resistance protein [Myxococcus xanthus DK 1622] gi|108461498|gb|ABF86683.1| putative cobalt-zinc-cadmium resistance protein [Myxococcus xanthus DK 1622] Length = 420 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 101/451 (22%), Positives = 178/451 (39%), Gaps = 63/451 (13%) Query: 27 PHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAK 86 PH PL F + + + + + SL + + +A Q+ +L A R A+ Sbjct: 2 PH-PLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQ 60 Query: 87 ENILSVRADLF--PSSYASISHRFIPNLKTN-STGQLDSDWKI----DLFGQR-RHIESS 138 + + R+ L P+ R P N + LD I +L G+R ES+ Sbjct: 61 GPVAAARSLLNDNPTFELQAGPRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESA 120 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQG 198 A L+ A A A+ V+ + ++ A H +ER+S+A + ++ + +F G Sbjct: 121 RAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLAREAEAAARETANSAQRRFEAG 180 Query: 199 A-------TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK- 250 +++SL ++ AE+ + E D + +H + +LG P T L + Sbjct: 181 DVPVVDVNVARVSLARMRAEVATAEGDEA-------VQLHQLRAMLGLPLTHPLAIRGEL 233 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---- 306 + QP D + RPDI E +LA + A + ++ ++P ++ Sbjct: 234 RVLALQPVTEAKT------DTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQ 287 Query: 307 ---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 IA S P LP+FD+G N R E + +++L Sbjct: 288 REIDEIAYLGALSVP-------------LPLFDRG---DNAR----VTGEARVRRLQSLL 327 Query: 364 NAIK-----EVENALTSINEDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYSLLDILDI 417 A + +VE A + + VT L+ A+ L + SL+ +Y G L + L + Sbjct: 328 AAARLEVDVQVEAARVQHRKRLEAVTLLEADALPLLSDNESLARRSYEAGEMGLAEFLLV 387 Query: 418 ERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 R T + + Q A S V L + G+ Sbjct: 388 RRDTLEARAAYLDSLLQAALSRVQLAVETGA 418 >gi|294643931|ref|ZP_06721718.1| outer membrane efflux protein [Bacteroides ovatus SD CC 2a] gi|292640703|gb|EFF58934.1| outer membrane efflux protein [Bacteroides ovatus SD CC 2a] Length = 372 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 40/275 (14%) Query: 99 SSYASISHRFIPNLKTNSTGQ--LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIA--KL 154 SS S S N KT+ G L++ W + G +R L++ A++D+A + Sbjct: 9 SSRVSGSEIISSNSKTSYNGNYGLNASWTL-YNGNKRLKTIQQEKLNNQMAELDVATSEN 67 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N+ + YI + E + + L + + G+ +K L +LEA++ + Sbjct: 68 NIQESIAQVYIQILYAAESVKVNENTLQVSIAQRDRGQELLNAGSIAKSDLAQLEAQVST 127 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI----NIGIPAD 270 + T + +TL Y N N+Y+P N+ P Sbjct: 128 DRYQLVTAQ----------ATLEDYKLQLKQLLELDGENEM--NIYLPALSDENVLAPLP 175 Query: 271 LIRN--------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFP 318 R+ RP+I + + S I IAKS +P++SL+ I H D +F Sbjct: 176 TKRDVYISALSLRPEIEASKLNVEASELGINIAKSSYFPTISLSAGIGTNHTSGSDFTFG 235 Query: 319 -----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 G+N S G + +PIF+ + KS +++A+ Sbjct: 236 EQVKNGWNN--SIGLSVSVPIFNNRQTKSAVQKAK 268 >gi|225012077|ref|ZP_03702514.1| outer membrane efflux protein [Flavobacteria bacterium MS024-2A] gi|225003632|gb|EEG41605.1| outer membrane efflux protein [Flavobacteria bacterium MS024-2A] Length = 447 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 28/295 (9%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 I +L Y + E SI Q L++ K+ + F G T+KL++ L A++ Sbjct: 146 TIIQLYSVYFNVAQLTESKSIFKQALEVSKERESRAESAFKYGQTNKLAV--LNAQVDVT 203 Query: 216 ESDIPTLEKSFRM-NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 I LE + ++ N LL + E K S + Q + I I L+ N Sbjct: 204 NDSISVLEITQQLDNAKRDLNLLLSQSME-----NKYSVSTQVDFVSEIQI---EALLEN 255 Query: 275 RP----DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPGYNTH-- 323 + Q++ + + +++S PS+ L GS + S FPG N + Sbjct: 256 AAAYNVSLLKQKQNTQINSYDVKVSQSGYLPSIGLVGSYGWNLNQSPASAFFPGTNNNTY 315 Query: 324 -WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 SFG L +FD G+ + ++ A+ + + Q I E L +++ NAL S K I Sbjct: 316 SMSFGANLSWNLFDGGRSITRVKNAKIAVENQKILTDEIQLTFERDLSNALQSYKNAKMI 375 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + + VE + S Q +Y+L I IE A++ + + + LAK Sbjct: 376 YSIQEKQVETGSYNFERS-----QAQYNLGSITAIEFRQAQINLRNAQNQWTLAK 425 >gi|290473562|ref|YP_003466432.1| alkaline protease secretion protein AprF [Xenorhabdus bovienii SS-2004] gi|289172865|emb|CBJ79636.1| Alkaline protease secretion protein aprF [Xenorhabdus bovienii SS-2004] Length = 460 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 74/349 (21%), Positives = 144/349 (41%), Gaps = 67/349 (19%) Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 + A +VD +L V +++ SY+D + ++R + Q Y++ +E + F G + Sbjct: 137 MSDARFRVDTQQLAV--RVVNSYVDVAYAQDRQAQVAQQRRAYEEQLERNQKLFASGEGT 194 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 + + + +A + +D T++ + ++ L+G P + L Sbjct: 195 RTDVAETQAHYSQVVADELTVKDELDAAIRDLQLLVGIPLPDDL---------------- 238 Query: 262 PINIGIPADLIRNRPDIRY--------------QEKKLADSVAKIGIAKSD--------- 298 P+N P ++N I+ Q +LA++ K+ +A D Sbjct: 239 PVNRLSP---VQNFKIIKLAFAHYADWEQIALSQNPQLAEARQKVAVAAQDIERNRAGYL 295 Query: 299 ----LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE---SSA 351 LY S + N S + DN S G ++ + +++ G + +R++ S A Sbjct: 296 PKLELYASHTENKS---SSDNIVDQKYRTDSIGLRVSMNLYNGGGTSAAVRQSAANYSKA 352 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + LNA++ NA +N +K+I + AVE + + + + G+ Sbjct: 353 KYEMDAEAGETLNALRRNYNAC--MNGEKRI-RAYESAVEAAELQVKATQKSVALGQRVN 409 Query: 412 LDILDIERATAKVEVDLSIAKRQLAKSYVDL----------YIAIGSGY 450 +DIL+ E+ DLS AK Q KS++ L +I + SGY Sbjct: 410 VDILNAEQQLYIARRDLSQAKYQYMKSWIGLLSEAGQLNGEHIQLASGY 458 >gi|209885210|ref|YP_002289067.1| type I secretion outer membrane protein, TolC family [Oligotropha carboxidovorans OM5] gi|209873406|gb|ACI93202.1| type I secretion outer membrane protein, TolC family [Oligotropha carboxidovorans OM5] Length = 469 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 49/279 (17%), Positives = 120/279 (43%), Gaps = 25/279 (8%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+D + + +++ ++ ++ + +F G ++ + + +A++ + + + E Sbjct: 155 YMDYLRDSAIVEVQRSNVNVLEQTLKQTQDRFNVGEVTRTDVAQSQAQLAAGRTQLLAAE 214 Query: 224 KSFRMNVHNISTLLG------YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 + N ++G P + Y+ K +L IN+G L+ N P+ Sbjct: 215 STLTTTRANFRRIIGSDPQNPQPGSPVDRYLPK-------SLAQAINMG----LVEN-PN 262 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----KLYLP 333 + + S ++ +A+ L+P+L+L G++ +++ + T+ FG +L +P Sbjct: 263 VTAAMYGIDVSHLQVKVAEGALFPTLTLQGAVQHSNETTV---TTYQQFGASATAQLTVP 319 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 I+ G S IR+++ + +Q + + V + + K V Q V Sbjct: 320 IYQGGSEYSLIRQSKETLAQQRLNLDQVRDQTRATVAQSWGQLTATKSQVASAQAQVTAS 379 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + +++ R G+ + LD+L+ ++A + L A+ Sbjct: 380 EIALNGVREEARVGQRTTLDVLNAQQALVNARIALVTAQ 418 >gi|288926172|ref|ZP_06420099.1| outer membrane efflux protein [Prevotella buccae D17] gi|315608866|ref|ZP_07883840.1| outer membrane efflux protein [Prevotella buccae ATCC 33574] gi|288337064|gb|EFC75423.1| outer membrane efflux protein [Prevotella buccae D17] gi|315249473|gb|EFU29488.1| outer membrane efflux protein [Prevotella buccae ATCC 33574] Length = 446 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 65/315 (20%), Positives = 124/315 (39%), Gaps = 27/315 (8%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH--RFIPNLKTNST 117 +L + ALQ N++I + + ++ E++L +A L PS S S + P +++ + Sbjct: 27 TLQDCIDYALQNNISIRKTRLQQQSSHEDVLQSKAALLPSLNFSTSQSVNYTPWVESGIS 86 Query: 118 GQLDSDWKIDLF----------------GQRRHIESSLANLDSAYAQVD--IAKLNVISK 159 S ID F G + L L +A +D + N+ + Sbjct: 87 SDGYSRSSIDKFYYNGSYGVNANWTVWDGNKNRNTVKLNKLAEEHAALDSAVQARNIQEQ 146 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y+ + E I + + L + N E G SK L +L ++ + ++ Sbjct: 147 IAQLYVQILYTTEAIGVNKESLKTSEANEERGKTMVGVGKMSKADLAQLTSQRAQDQYNV 206 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 E + + LL E + + IP G+ + NRP+++ Sbjct: 207 VAAESQVKNYKRQLKELLQITGDETFDIAVPPATDEMALAEIPALNGVYTAALDNRPELK 266 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFP-GYNTHWSF----GPKLYL 332 + +A S I +AK+ P+++LN I + T N+ G +F G L + Sbjct: 267 AYQNAIAQSDLNIKMAKAGKLPTVALNAGITTSTTSMNTLAWGRQLKTNFNSGAGITLSI 326 Query: 333 PIFDKGKIKSNIRRA 347 P+ D + K+ + +A Sbjct: 327 PLSDNRQTKTAVNKA 341 >gi|109896759|ref|YP_660014.1| TolC family type I secretion outer membrane protein [Pseudoalteromonas atlantica T6c] gi|109699040|gb|ABG38960.1| type I secretion outer membrane protein, TolC family [Pseudoalteromonas atlantica T6c] Length = 436 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 88/414 (21%), Positives = 176/414 (42%), Gaps = 58/414 (14%) Query: 68 ALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLD---SDW 124 ALQ + LQ+ AA +I RA L P S+ + G LD +D Sbjct: 30 ALQNDPATLQSKANREAAFSDIEISRAGLLPQVSLSLQ-------AAETYGDLDRSTNDV 82 Query: 125 KIDLFGQRRHIESSLANLDSAY-------AQVDIAKLNVISKLIPSYIDARHFKERISIA 177 ++L Q + S LD A A + + N+I + + +Y D ++ ++ A Sbjct: 83 TVNL-SQTIYDRSLWVGLDRAELVASQSDASLALTMQNLILRTVSAYFDTLQAQDDLAFA 141 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK-SIESDIPTLEKSFRMNVHNISTL 236 + +E + +F G T+ + + +A+ S+ ++I + E + N+ + + Sbjct: 142 RAEKRAIARQLEQTKQRFEVGLTAITDVHEAQAQYDTSVAAEI-SAENAVETNLEALREI 200 Query: 237 LG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGI 294 G YP L+ Q F +L P N+ D ++ + +L S A + I Sbjct: 201 TGVYYPDLNVLNTEQ-----FSASLPTPANVN---DWLKT---AEQRNLELLVSNASVDI 249 Query: 295 AKSDL-------YPSLSLNGSIALTHDNSF---PG------YNTHWSFGPKLYLPIFDKG 338 AK D+ YP++ ++GS + F PG +NT + + +P++ G Sbjct: 250 AKFDIKSARAGHYPTVGISGSANSNDTDGFAINPGAGGSDRFNT-YGVTLSVDVPLYTGG 308 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEV-ENALTSINEDKKIVTKL---QHAVELHK 394 ++ +N+ SA+ +++ E + V N ++ N+ K ++++ + AV + Sbjct: 309 RVSANV----DSAKHRFVATSEDRERIHRSVIRNVRSNYNDIKAAISRIKAFEQAVVSAQ 364 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + + G +++D+LD R +LS A+ S ++L +A G+ Sbjct: 365 SALKATEAGFDVGTRTIVDVLDSTRNLFDARRNLSSARYGYVVSTLNLKLAAGT 418 >gi|218705667|ref|YP_002413186.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli UMN026] gi|218432764|emb|CAR13658.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli UMN026] Length = 362 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 134 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 193 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 194 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 253 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 254 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 308 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 309 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|333008028|gb|EGK27504.1| cation efflux system protein cusC domain protein [Shigella flexneri K-218] Length = 104 Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP +P QFS+ S+N + N + W F D + L+ AL Sbjct: 15 LTGCSLAPDYQRPVMP-VPQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKTLISEAL 71 Query: 70 QQNLTILQATERINAAKENILSVRADLFP 98 N + AT ++ A+ AD +P Sbjct: 72 VNNRDLRMATLKVQEARAQYRLTDADRYP 100 >gi|281421472|ref|ZP_06252471.1| putative outer membrane efflux protein [Prevotella copri DSM 18205] gi|281404544|gb|EFB35224.1| putative outer membrane efflux protein [Prevotella copri DSM 18205] Length = 451 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/275 (19%), Positives = 117/275 (42%), Gaps = 22/275 (8%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 ++ Y+DA + + I IA + L+ K+ + + G + +V++E+++ E ++ Sbjct: 141 VMQKYVDAAYAEASIQIASEKLNESKRMLAKMKRLYELGEKGRPDVVQMESQVAEDEYNL 200 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ---PNLYIPINIGIPADLIRN-- 274 E + ++ + + + +P E L + N + N +P + G+ + + Sbjct: 201 THQENVAKQSLLALKSAMNFPVDEELKIQITEERNLKLKAENKEVPES-GVNYETVYQGF 259 Query: 275 ---RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA------LTHDNSFPGYNTHWS 325 PD++ E ++ + IAK L PSLSL G I+ L+ + G+ + + Sbjct: 260 QHISPDLKSAEYEVERARYDYKIAKGRLLPSLSLGGGISTNYYKNLSQKGQYDGFASQFR 319 Query: 326 FGPKLYL------PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 YL PI++ + S +++A + Q + +ET ++ A+ Sbjct: 320 NNQGEYLALTLSIPIYNSDRWHS-VKKARNDWQLAQVNLEETRRKLHDQIAQAVMDAEGY 378 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 K + ++Q V + +S + +G S D+ Sbjct: 379 AKELHQMQKKVASDSLAYHMSSRKFEEGMLSTFDL 413 >gi|218559057|ref|YP_002391970.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli S88] gi|218365826|emb|CAR03566.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli S88] Length = 362 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 134 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 193 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 194 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 253 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 254 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 308 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 309 LAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|282858193|ref|ZP_06267386.1| putative outer membrane efflux protein [Pyramidobacter piscolens W5455] gi|282583976|gb|EFB89351.1| putative outer membrane efflux protein [Pyramidobacter piscolens W5455] Length = 485 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 14/161 (8%) Query: 267 IPADL---IRNRPDIR--YQEKKLADSVAK--IGIAKSDLYPSLSLNGSIALTH-DNSFP 318 IPAD+ IR + R YQ + A + K I +A+S L P+LSL+ + N Sbjct: 261 IPADVEAAIRETLERRGDYQSLRYAAASRKNEIAVARSGLLPTLSLSSGYRFGYTSNGLG 320 Query: 319 GYN--THWSFGPKLYLPIFDKGKIKSNIRRAESS--AQEQYITWQETVLNAIKEVENALT 374 G + W+ L +P++D G ++R A++ A E + +E + A E+ ++ Sbjct: 321 GVSDKNQWTASLTLDVPVYDGGSTSGSVRAAKAGLKAAEHALDEKEDSIKA--ELADSWL 378 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 S+ + ++ + ++L K+S+ + YR+G + +D+L Sbjct: 379 SLQNALETLSAGRANLQLAKESLDYAESGYREGVNTQIDVL 419 >gi|255530574|ref|YP_003090946.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] gi|255343558|gb|ACU02884.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] Length = 483 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 41/335 (12%) Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 LD+ V+ K +++ +++ +Y+ + K+ + A Q L + +K ++ G + Sbjct: 132 LDADKTNVEKIKNDLVLQVVTAYMQILYNKDFLQAAKQQLTVAQKQLKQQQELLDVGNKT 191 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 L + ++++ + E D+ T E + ++ ++ L+ P++ NF+ + +I Sbjct: 192 LADLAESKSQVATAELDVTTAENALTISYLTLAQLMDIPSSTKYQVKAPDVANFENSAFI 251 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS-----------IA 310 + D + PDI+ + + I IAK + YPSLS I Sbjct: 252 YDPEQVYTDALSFFPDIKLAGLRSEAAKKGITIAKGNYYPSLSFGAGLNSNYSSGRQRIT 311 Query: 311 LTHDNSF---------------PGYNT---HWSF------------GPKLYLPIFDKGKI 340 N F P + T ++ F G +L +PIF+ Sbjct: 312 SIQANGFKEIGRTQTTNEAVVTPDFTTFAENYKFKDQLTDNFGQYVGVRLEIPIFNGFTA 371 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +S++R+A+ + Q+ Q T N K + A+ + + K++ S+ Sbjct: 372 RSSVRKAKINYQQNQTDEQLTKNNLNKVIYQAVADLKAARSTFESSTRTFNARKEAFSVI 431 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 Y G + LD + K E+D+ AK L Sbjct: 432 EQRYNVGLVNALDYSTSQTNKNKAEIDMIRAKYDL 466 >gi|89108955|ref|AP_002735.1| predicted outer membrane protein [Escherichia coli str. K-12 substr. W3110] gi|170081761|ref|YP_001731081.1| outer membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|218554704|ref|YP_002387617.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli IAI1] gi|218695750|ref|YP_002403417.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli 55989] gi|85675252|dbj|BAE76615.1| predicted outer membrane protein [Escherichia coli str. K12 substr. W3110] gi|169889596|gb|ACB03303.1| predicted outer membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|218352482|emb|CAU98259.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli 55989] gi|218361472|emb|CAQ99061.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli IAI1] gi|242377780|emb|CAQ32543.1| putative channel/filament protein [Escherichia coli BL21(DE3)] Length = 362 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 134 VAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 193 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 194 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 253 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 254 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 308 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 309 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|290968735|ref|ZP_06560273.1| outer membrane efflux protein [Megasphaera genomosp. type_1 str. 28L] gi|290781388|gb|EFD93978.1| outer membrane efflux protein [Megasphaera genomosp. type_1 str. 28L] Length = 495 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 15/290 (5%) Query: 138 SLANLDSAYAQVDIAKLNVISKL--IPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 +LA L AQ D+ K +KL + Y +E + + + + +++ ++ Sbjct: 177 ALAELGKEAAQEDLLKSEQNTKLEAVKGYFSLLAAREVQRVYKEAVANLQAHVQNVKAQY 236 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNF 255 T G +K+ ++ E + + ++ + + N+ +LG P T L +Q F Sbjct: 237 TVGTVAKVDVLHSEVSLAAAKTRAVGADNEAALAEDNLDNILGLPLTTAL-TLQDHRLPF 295 Query: 256 QP-NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 Q L + + + RP++ + + + +AK+D P+ + + A +D Sbjct: 296 QAYTLSLQESTQYA---LTYRPEVLQAALAVQKAATYMALAKADNRPTAGIRFTQAW-ND 351 Query: 315 NSFPGY-NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW---QETVLNAIKEVE 370 +FPG + WS G ++ +D G K I +A QE I Q+T +V+ Sbjct: 352 TAFPGTKHKTWSLGGQISYRFYDGGAGKHKISQAR---QELNIAGEIEQKTRDGVQLQVK 408 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 A ++ + V + Q AV + ++S + Y G LD+LD + A Sbjct: 409 QAYLAVRSAAQRVRETQAAVTQAAEGFAISRVRYEAGVGINLDVLDAQLA 458 >gi|253996848|ref|YP_003048912.1| outer membrane efflux protein [Methylotenera mobilis JLW8] gi|253983527|gb|ACT48385.1| outer membrane efflux protein [Methylotenera mobilis JLW8] Length = 421 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 36/305 (11%) Query: 129 FGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 G +R I+S+ D+ + I K V + + ++ +ER+S+A LD+ K+ Sbjct: 101 MGNKRDNRIKSADIRYDAVNTDIAIKKSEVYANVQAAFYSVLAAQERLSLATSSLDVAKQ 160 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 E + K G S + K + I+ + + +++L G P +F+ Sbjct: 161 AREAASKKVQAGKISPVEETKSKVAESGIKIEANQATSTLNTARKRLASLWGSPFPKFMQ 220 Query: 247 YMQKQSNNFQPNLYIPINIGIP-----ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + N IP IP ++++ N P I+ + ++ A++ I + P Sbjct: 221 TVGQIEN-------IP---AIPSLQELSNMLDNAPSIQRAKLEIDVRQAQVNIENTKRTP 270 Query: 302 SLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQ 359 L+L SI + G N G + +P+FD+ G ++ + R + A+++ + ++ Sbjct: 271 DLTL--SIGAKRNEEL-GLN-QAVLGFSIPIPVFDRNQGNLQVAVSRTD-KARDELVAFR 325 Query: 360 ---ETVL-NAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 ET L A + + A S++ K+I+ Q A + K NY LD+ Sbjct: 326 VQLETQLGGAYERLSTARQSVDTLQKEILPGAQSAFDAATKGFEFGKFNY-------LDV 378 Query: 415 LDIER 419 LD +R Sbjct: 379 LDAQR 383 >gi|167737369|ref|ZP_02410143.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 14] gi|167844528|ref|ZP_02470036.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei B7210] Length = 154 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 23/138 (16%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIG------------NSKNLINIDTLKWWESFNDTSLNKL 64 GCT+ P Y +P P+ + G S N + W E F D L +L Sbjct: 12 GCTLAPRYERPAAPVSGAFPADGVYAAQPGAAPGARSANGQAAVDIGWREFFVDPRLQRL 71 Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPS-----------SYASISHRFIPNLK 113 ++IAL+ N + + + A++ RA LFP+ + A +S P + Sbjct: 72 IEIALKNNRDLRVSVLNVEASRAQYQITRAGLFPTLSGTGTGTIQRTPAGVSITGQPLIS 131 Query: 114 TNSTGQLDSDWKIDLFGQ 131 + + W++DLFG+ Sbjct: 132 RTYNVGVSASWELDLFGR 149 >gi|167588698|ref|ZP_02381086.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ubonensis Bu] Length = 225 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 35/220 (15%) Query: 18 CTVGPEYTKPHMPLLP-----TQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 CT+ P+ PL P F N+ W SF D L LV AL N Sbjct: 16 CTIAPQ------PLAPIAVELDSFRHANTSAASGSSLAGWPASFGDPQLATLVDAALAHN 69 Query: 73 LTILQATERINAAKENILSVR-ADLFPSSYASISHRFIPNLKTNSTGQLD---------- 121 + A R++ A+ +L VR A L P+ +S F ++ +G +D Sbjct: 70 ADLHAAAARVDQAQA-LLGVREAALAPT--VGVSPSFS---RSRVSGTVDNALPKRTMRN 123 Query: 122 ------SDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 + +++DL+G+ R + N+ A A D ++ V +++ Y+ + E + Sbjct: 124 WSMPVSASYEVDLWGRLRGDADIGAQNVLQAAADRDAMRVRVATEVASDYLTLHYVDEDL 183 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 + + + L + +++ + GA S L ++ A++ + Sbjct: 184 AALDRAIGLRRTALDVIAARVRAGAASDLDALRAAADLDT 223 >gi|162451892|ref|YP_001614259.1| outer membrane efflux lipoprotein [Sorangium cellulosum 'So ce 56'] gi|161162474|emb|CAN93779.1| probable outer membrane efflux lipoprotein [Sorangium cellulosum 'So ce 56'] Length = 505 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 62/330 (18%), Positives = 143/330 (43%), Gaps = 38/330 (11%) Query: 141 NLDSAYAQVDIAKLNV----------ISKLIPSYIDARHFKERISIAHQI-LDLYKKNIE 189 + +A VD+AKL++ ++ + S + A ER+S +++ L + +E Sbjct: 190 GIGTARRSVDVAKLSLEDRRRITVGAVADAVVSIVTA----ERVSEINRVGLRSALERLE 245 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG----------Y 239 L+ + G +KL +V+ E ++ + + + +++ R + +LG + Sbjct: 246 LTRRRERLGTGTKLDVVRAEQDVALARATLVSGDEALRKAREALGAVLGERGEVGVPQGF 305 Query: 240 PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAK-SD 298 +Q Q + + AD+ R ++ E+ L D AK+ A D Sbjct: 306 SLNAIAAEVQSQCAEARADQR--------ADVRAARAELEIAERNLTD--AKLAFAPYVD 355 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 L +LS S L +++ + WS G L +PI+D G +++ ++ ++Q + Sbjct: 356 LSSTLSAQTS--LGDESTRRARSWGWSIGAVLTVPIWDGGARYGDLQINRAAVEQQRVRL 413 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 A E A+ + ++ + + +L +++ L+ + + G + D+++ Sbjct: 414 GAVERTAGLETTQAVRGVAVAEQSRAVAEQSRDLARETARLTQVAFEAGTATSFDLVESG 473 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 R + E+DL++ + ++ K+ + +A S Sbjct: 474 RRQREAELDLAVREFEVVKAKITALLASAS 503 >gi|330809470|ref|YP_004353932.1| ABC transporter [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377578|gb|AEA68928.1| putative ABC transport system, outer membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 449 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 86/178 (48%), Gaps = 18/178 (10%) Query: 284 KLADSVAKIGIAKSDL-------YPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYL 332 +LA +A + +A++ YP+LSL + + P +T++ G +L + Sbjct: 262 ELAARLAAVKVAEAQADSQRAGHYPTLSLTTQLTRRETRQYQELDPRQDTYY-VGVQLDI 320 Query: 333 PIFDKGKIKSNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 P++ G +++++ +AE+ AQ Y ++ + +++E + +Q A Sbjct: 321 PLYRGGAVRASVAKAEAQLAGAQSDYDVQRQQL---AEDIETDYLGVVAGFAKSKAMQRA 377 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 VE ++++++ + ++ G S +DILD ++ + DL K + +SYV L+ G Sbjct: 378 VESNQRALTSTEKGFQGGVRSTVDILDAQQRLFQARRDLLNTKLDMLQSYVSLHTHTG 435 >gi|21673588|ref|NP_661653.1| outer membrane efflux protein, putative [Chlorobium tepidum TLS] gi|21646701|gb|AAM71995.1| outer membrane efflux protein, putative [Chlorobium tepidum TLS] Length = 480 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 52/271 (19%), Positives = 123/271 (45%), Gaps = 10/271 (3%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V++ + +Y D E+ + Q + +++ + ++ F QG + + +K +++ Sbjct: 175 GVVTSIRRAYYDVLIATEKRKLVEQSIARWEEARKDTNALFRQGVAADIDTLKAWLSVEN 234 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-ADLIR 273 + D+ + + + N+ ++G L + + F + +P ++ ++ + Sbjct: 235 LRPDLIRAQNNEAITATNLKRVMGIDQETPL--ILTSTLTFH-EIEMPKSVAAAYSEALD 291 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGY-NTHW----SFG 327 RPD+R + AK+ A+S+ P LS G + A T N +T W + G Sbjct: 292 KRPDVRSLSLQAEAENAKVMAARSEGLPVLSAFGQLEAQTQFNDGTSLASTRWPVSSTAG 351 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +L +PIF + I++A+ + + +++ +VE L+++ E +K + Sbjct: 352 LQLSVPIFSGFATSARIQQAKITRLQTSTRYEDLKSQVRADVEVRLSNVVEARKRIDVQS 411 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + + ++S ++M+ R+G S L++ D E Sbjct: 412 KTIAVAERSYKITMLRLREGIGSRLELTDAE 442 >gi|325955407|ref|YP_004239067.1| outer membrane efflux protein [Weeksella virosa DSM 16922] gi|323438025|gb|ADX68489.1| outer membrane efflux protein [Weeksella virosa DSM 16922] Length = 442 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 36/152 (23%) Query: 292 IGIAK----SDLYPSLSLNGSIALTHDNSFPGYNTHWSF------------GPKLYLPIF 335 +G AK ++LYP+ + L+ + + G+ + F G + +PIF Sbjct: 265 LGFAKEAERANLYPT------VGLSANYGYQGFGDKFMFSKEFMWSDMATLGINVSIPIF 318 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVL-------NAIKEVENALTSINEDKKIVTKLQH 388 G K+ I++AE + ET L NA ++ENA+ S+ K+ Sbjct: 319 TGGSTKAKIQQAEVDLLDIEEQINETKLALSLEYHNAKAQIENAIQSVEIQKE------- 371 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V L +K +S + NY+QG SL +I+D E A Sbjct: 372 NVALAEKVLSNTQANYQQGLASLTEIIDAENA 403 >gi|307824720|ref|ZP_07654943.1| outer membrane efflux protein [Methylobacter tundripaludum SV96] gi|307734078|gb|EFO04932.1| outer membrane efflux protein [Methylobacter tundripaludum SV96] Length = 128 Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 63/119 (52%) Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ G+I+++I A++ + +++ L A+++VENA + + ++ A Sbjct: 4 PIFNAGRIQAHITAADARLDQVAANYEKAFLLALEDVENAFVAHAASLERRDRMAEAETA 63 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 +++ L+ Y++G L LD +R+ V D + A+ + + V +Y A+G G++ Sbjct: 64 AEQAYRLANALYQRGANDYLSALDAQRSKLVVADDRAKAETAMRVALVSIYRALGGGWS 122 >gi|91976619|ref|YP_569278.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] gi|91683075|gb|ABE39377.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] Length = 423 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 15/303 (4%) Query: 127 DLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 +L+G+R I + A LD+A +L V+S+ +++ A + RI I + + Sbjct: 101 ELWGKRDARIAAGQAGLDAAAIGRQAVRLEVLSETAIAFVTALGLQRRIQILDEQVQAID 160 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 K L + GA+S + E +++D + + ++ L+G A +F Sbjct: 161 KITPLLKRRVEAGASSVAETGRAEVASALVKADRERTKSALSSARRELAILMGDSAPKFA 220 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + +P + + I A+ P + + A A++ +A+ YP +++ Sbjct: 221 AVSGRLDVTGKPPSFHSVISAIDAN-----PQLVRWKAVYAQRNAELLLARLRPYPDVTV 275 Query: 306 NGSIALTHDNSFPGYNTHWSFGPKLYLPIFD--KGKIKSNIRRAESSAQEQYITWQETVL 363 S + H N S + LP+FD +G I S +A E+ +L Sbjct: 276 --SAGMRHYNETGDSAVRLSL--SVPLPVFDQNQGNILSAQETLARTAAERQGNRNTLIL 331 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A + ++ S+ E + + A+ K + Y QGRY+LL++LD + + A+ Sbjct: 332 VAGRAYDSLRGSLRE---LAILREVAIPKSKDAAEAISEGYGQGRYTLLEVLDSQASVAQ 388 Query: 424 VEV 426 + Sbjct: 389 ARL 391 >gi|126663116|ref|ZP_01734114.1| putative outer membrane transport/efflux protein [Flavobacteria bacterium BAL38] gi|126624774|gb|EAZ95464.1| putative outer membrane transport/efflux protein [Flavobacteria bacterium BAL38] Length = 430 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 34/157 (21%) Query: 289 VAK--IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------------------FGP 328 VAK +GI++S P+L+ F GYNT WS G Sbjct: 256 VAKKDVGISRSSYLPTLT-----------GFVGYNTRWSESPVYNFIDQLSLFDGTALGL 304 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 +L +PIF+ ++ ++RA+ + + ++ L+ + V A ++ KK Q Sbjct: 305 QLNVPIFNGFSTRARVQRAKINQERSEFQLKQAELDLERNVYQAYNDVSNAKKAFEAAQK 364 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 +E K++ + S Y G LL+ D ++T E Sbjct: 365 TLEARKQAFNFSKERYEVG---LLNAFDFSQSTIAFE 398 >gi|254251023|ref|ZP_04944341.1| Outer membrane protein [Burkholderia dolosa AUO158] gi|124893632|gb|EAY67512.1| Outer membrane protein [Burkholderia dolosa AUO158] Length = 235 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 20/130 (15%) Query: 17 GCTVGPEYTKPHMPL------LPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQ 70 GC VGP+Y +P + P + + + D WW+ + D L+ L+ Sbjct: 92 GCAVGPDYHRPDASIPAAFKEAPAGWKVAQPAD--RTDRGPWWKVYADPQLDALIDRLNA 149 Query: 71 QNLTILQATERINAAKENILSVRADLFP------------SSYASISHRFIPNLKTNSTG 118 N TI Q+ A+ + RA FP + AS+S N + +TG Sbjct: 150 SNQTIAQSAAAYRQARALVAEARAAYFPTVSLSASGSRSRTPRASLSSGTSSNFGSGATG 209 Query: 119 QLDSDWKIDL 128 +++ + + L Sbjct: 210 SINNSYSVGL 219 >gi|212691194|ref|ZP_03299322.1| hypothetical protein BACDOR_00685 [Bacteroides dorei DSM 17855] gi|212666426|gb|EEB26998.1| hypothetical protein BACDOR_00685 [Bacteroides dorei DSM 17855] Length = 471 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 72/343 (20%), Positives = 152/343 (44%), Gaps = 38/343 (11%) Query: 118 GQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY---IDARHFKERI 174 G++ + +K+ L G+ +A ++ + VI K +Y + A+ K Sbjct: 150 GKIRAAYKMSLLGKE------MAQMNET-----LTATEVILKTDQAYALVVKAKEMKTVA 198 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 H +L +KN+E + + G + ++K++ ++ E I E + R+ N+ Sbjct: 199 DTYHAVLAELQKNVESA---YKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATMNLC 255 Query: 235 TLLGYP-ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 L+G P TE L S +F P + + + + D+ R RP+ +K++A + ++ Sbjct: 256 HLIGKPLTTEILI-----SGDF-PEIEQEMELQV-LDITR-RPEYGILDKQVAIARQQVK 307 Query: 294 IAKSDLYPSLSLNGSIALTH-----DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + S+L P + + GS H + +F N +S + +P+F G+ + +R A+ Sbjct: 308 LNHSELLPKVGIKGSYDYVHGLELNEKNFLD-NASFSVLLNVSIPLFHFGERSNKVRAAK 366 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + ++ + Q + E+ A +++E K ++ +++ +S Y G Sbjct: 367 ARLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLWQAEENRRVSKSQYEVGL 426 Query: 409 YSLLDILDIE---RATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L D L+ + + + +VD A+ QL +YV A G+ Sbjct: 427 ETLSDHLEAQALWQQAYETQVD---ARFQLYLNYVAYLKAAGT 466 >gi|209964472|ref|YP_002297387.1| type I secretion outer membrane protein, TolC family [Rhodospirillum centenum SW] gi|209957938|gb|ACI98574.1| type I secretion outer membrane protein, TolC family [Rhodospirillum centenum SW] Length = 458 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 55/282 (19%), Positives = 121/282 (42%), Gaps = 49/282 (17%) Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ +E + +F G ++ + + E+ + SD E + + L+G P Sbjct: 167 VLRRQLEAAQDRFRVGEITRTDVSQSESRLARSTSDRIQAEGLLNASRAQFARLIGAPPA 226 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLI-------RNRPDI---RYQEKKLADSVAKI 292 + + + + I +P L +N P++ R+ ++ D+ I Sbjct: 227 KLVQPV--------------VTIALPKTLEETVALGEQNNPNVIASRFNQQASQDN---I 269 Query: 293 GIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSA 351 + + +L PS+S+ G+++ D S + S ++ +PI++ G + +R A+ A Sbjct: 270 DLVRGELLPSVSVAGTLSKNWDQSQLVDESEQASIVARVTVPIYEGGATTARVREAKQIA 329 Query: 352 QEQYI-------TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ++ I +ET + A + + A SI K+ V A+E ++ ++ Sbjct: 330 SQRRIQIEETSRAARETAIRAWEALVTARASILSRKEQVRAADIALEGVRQEATV----- 384 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAI 446 G ++LD+LD E+ +L A+ +L +S D +A+ Sbjct: 385 --GSRTVLDVLDAEQ-------ELLNARVELVRSQRDELVAV 417 >gi|223935296|ref|ZP_03627214.1| outer membrane efflux protein [bacterium Ellin514] gi|223896180|gb|EEF62623.1| outer membrane efflux protein [bacterium Ellin514] Length = 443 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 11/243 (4%) Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI- 267 +++ + IE++ T E RM + + A E L + K N+ P+ + + + Sbjct: 192 DSDRRQIENNAETFELQARM--AEATAVHARLAVEVLLGVNKPQGNWLPSDTLEKLVALH 249 Query: 268 ----PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 + RPD+ E L S A + + K+ P + + P +T Sbjct: 250 QVFSEGNTNGARPDVLAAEAALKGSEADLKLQKALRIPDPTFSALAEHEPPGGGPAVDT- 308 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 + FG LP++++ K I+ AES+ ++ I + + ++ +A + NE + Sbjct: 309 FGFGVSFPLPLWNRNK--GGIKAAESTVKQNEIALDKVKAQVVMDIADAQVNYNEASARL 366 Query: 384 TKLQHAVELHKKSMSLSMI-NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + Q ++ + + S+ Y +G SL+D+L ER V + + A A + DL Sbjct: 367 QRFQTKIQPNAGKVRESIAYAYEKGGASLVDLLTAERDDNSVRLATAQAMADTANATADL 426 Query: 443 YIA 445 A Sbjct: 427 MAA 429 >gi|288573186|ref|ZP_06391543.1| outer membrane efflux protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568927|gb|EFC90484.1| outer membrane efflux protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 462 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 49/284 (17%), Positives = 122/284 (42%), Gaps = 13/284 (4%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y D + ++ ++++A + L+L ++++ + G +K +++++ ++ + ++ Sbjct: 159 AYYDLQRYRAKLTVAQESLELAREHLSQVESFYKYGVVAKDQVLRVQVDVSDGKLNVIKA 218 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-ADLIRNRPDIRYQ 281 E + + + +G + ++ + + +P + P A + +RP++ Sbjct: 219 ENAVDVGWRALERAVGTSLRDV--FLLSEPETSVSDRSVPED---PVASAMVHRPELASL 273 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 E +++ A P ++L G + D+ FPG N W +D G Sbjct: 274 EYSRRSALSLARAAAGSRGPQVALQGQLQNVDDSFFPGGNDDWKVTLSATWEFYDGGASV 333 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + R+A++SAQE + ++ + E+ + ++ + + Q V ++ +++ Sbjct: 334 AQERQAKASAQELLYSIEDLKKQIVLEISSGKLNLESALQRIEVAQDQVASAEEDYRMAL 393 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 Y + +D+LD V LS A+ QL + D Y A Sbjct: 394 KRYTANVGTNIDVLD-------ARVALSNARTQLVDAVYDTYTA 430 >gi|120434423|ref|YP_860131.1| outer membrane efflux protein [Gramella forsetii KT0803] gi|117576573|emb|CAL65042.1| outer membrane efflux protein [Gramella forsetii KT0803] Length = 455 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 19/314 (6%) Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 TG +++ ++ F I+S+ A + Q + ++I +I +YI + F++ + + Sbjct: 111 TGGINAQQQLLNFKLFNSIKSTSALAELRDLQTLVTTQDLIVNVIQTYIQIQVFQKEVEL 170 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 Q D IELS K+ +G KL L +L ++++ I + L Sbjct: 171 LKQNFDRTDNLIELSEAKYEEGIIRKLDLNQLLVNRSNLKTQIEDAIFGKNQQLRLFKVL 230 Query: 237 LGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE--KKLADSVAKIGI 294 L P ++ + ++++ + +P P+ + D ++ YQ+ K + S+ + Sbjct: 231 LNIPMSKEV-VLEEKLEDREP---YPLGTELFLD-----ANLEYQQLDKSIELSIIDQKL 281 Query: 295 AKSDLYPSLSLN-GSIALTHDNSF----PG-YNTHWS--FGPKLYLPIFDKGKIKSNIRR 346 K++ P+L+ + G L N F P Y WS +G +PIFD + ++ +++ Sbjct: 282 IKAEYLPTLNASFGYNYLGQANEFLDFDPALYQGQWSGTWGISASIPIFDGFQRRNRLKQ 341 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 E + ++ + + LN KE +A + + Q +EL +++ +Y + Sbjct: 342 KELATEQLELDRETLQLNIEKEYGDAREQLLLSNSQIESQQRNMELAQENYDGIKTSYNE 401 Query: 407 GRYSLLDILDIERA 420 G +L ++LD E A Sbjct: 402 GVANLTELLDSEFA 415 >gi|215433405|gb|ACJ66668.1| cation efflux system protein CusC [Myxococcus fulvus HW-1] Length = 456 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 20/186 (10%) Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK 329 + +R RP++ +L A + +A+ D YP + + G YN+ W P Sbjct: 271 EALRLRPELEGLRARLGGGEAAVRLAQRDSYPDVMVMGE-----------YNSMWMDTPH 319 Query: 330 LYLP------IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKI 382 ++ D GK K+ +R AE+ + + +E +++ I+ EVE A + E +++ Sbjct: 320 QFMAGVTVNIPLDFGKRKAAVRAAEAGLK-RLRREEEQLIDDIRVEVEQARSRAEEARRV 378 Query: 383 VTKLQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 V Q V + ++ + + G+ +++ ER +VE+ A + + + Sbjct: 379 VALFQERLVPAARDQVAAARAGFESGKNGFQVLIEAERNLRRVELREQTALADVQRRRAE 438 Query: 442 LYIAIG 447 L A+G Sbjct: 439 LDKALG 444 >gi|212690863|ref|ZP_03298991.1| hypothetical protein BACDOR_00351 [Bacteroides dorei DSM 17855] gi|212666592|gb|EEB27164.1| hypothetical protein BACDOR_00351 [Bacteroides dorei DSM 17855] Length = 438 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 20/246 (8%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL +A ++ AK ++ + +Y+ +E +AH ++L ++ +EL F G Sbjct: 118 NLKAATEDLNKAKEDISISVTSAYLQILFNEELAKVAHNQVELSREQLELKEAYFKNGKA 177 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S+ + + A + E + ++++ + +S LL P + + + + L Sbjct: 178 SEAEVYEARARVAQDEMSAVQADNNYQLALLELSQLLELPTPDGFGVVSPRVEDDFTLLS 237 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----- 315 +P + I A + N+P I+ + +L + I IA+S YP L+ + I + N Sbjct: 238 LPED--IYAQAVLNKPSIKAAQFRLEGAAKNIRIAQSSWYPQLNFSAGIGTNYYNISGVE 295 Query: 316 --SFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW--QETVLNAI 366 SF +N + F L +P+F++ ++ ++ A Q ++W +E+ Sbjct: 296 NASFSSQWHQNFNKYLQFS--LSIPLFNRFDTRNKVKNAR--IQRTALSWKLEESKKALF 351 Query: 367 KEVENA 372 KE++ A Sbjct: 352 KEIQQA 357 >gi|91217653|ref|ZP_01254610.1| Outer membrane protein-like [Psychroflexus torquis ATCC 700755] gi|91184157|gb|EAS70543.1| Outer membrane protein-like [Psychroflexus torquis ATCC 700755] Length = 782 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 84/407 (20%), Positives = 172/407 (42%), Gaps = 77/407 (18%) Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-PNLKTNSTGQ------LD 121 L++N++I E++ + +++ + + + P AS + +I P++ GQ L Sbjct: 341 LKKNISIQAVKEQVKLSGQDLKTAKNNYLPEIVASGAATYIDPDVAELGFGQSPEFQTLG 400 Query: 122 S-DWKIDLFGQRRHIESSL-ANLDSAYAQVDIAK-LNVISKLIPSYIDARHFKERISIAH 178 S + + LF ++ + ++ NL A QV A+ LN++ ++ Y++ K + H Sbjct: 401 SINLQQTLFSEQANATININKNLQKAEQQVLKAEELNIVFEVCNVYLNILILKVNAELQH 460 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI-----------KSIESDIPTL----- 222 L + KKN +++ F G + K + + ++EI IE +I L Sbjct: 461 SNLKVTKKNYDIAEQNFEAGFSGKSDMFRFKSEIAQNTQALVEAVNQIEQEIIQLNQLLN 520 Query: 223 ----------EKSFRMNVHN------ISTLLGYPATE--FLHYMQKQSNNFQPNLYIPIN 264 + S + + N TLL P T F+H++ +Q+ P L + Sbjct: 521 NPIDAKIDIEDASLELALFNAVEYDTFKTLLDSPVTRRPFVHFLIEQAQLNAPELKV--- 577 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---------SIALTHDN 315 + Y K + +V+ G K L P++ L + T Sbjct: 578 -------------VDYNIKAIERTVSLNG--KGRLLPTIGLQAQYNTVFNRNGVGSTSPE 622 Query: 316 SFPGY---NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE-N 371 F G+ NT+++ G + +PIF++ + ++N + A ++ + + + L V N Sbjct: 623 GF-GFTLPNTNYNVGVTVSIPIFNRNQTQTNKQTALIQKEQLTLNRENSELAISSNVNTN 681 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 L IN I + + E ++S+SL+ +Y G +++ ++D + Sbjct: 682 ILNVINRMTNIDLS-RVSAEAARESLSLTQTSYSNGAINIVQLIDAQ 727 >gi|160897160|ref|YP_001562742.1| outer membrane efflux protein [Delftia acidovorans SPH-1] gi|160362744|gb|ABX34357.1| outer membrane efflux protein [Delftia acidovorans SPH-1] Length = 443 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 60/283 (21%), Positives = 111/283 (39%), Gaps = 22/283 (7%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 D A A V + N+ + + ++ +ER+++A Q +++ + E + + G + Sbjct: 144 DVAQAGVAATRANIRADVRATFYSLLAAQERVTVAKQTVEIVRSAREAAAKRVAAGKVAP 203 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 L + + E + E R+ + LLG F + F+ P Sbjct: 204 LEESRAKVAESGAELEQGKAESDLRVARQQMQALLGGQDFSFGPAL----GTFEIAPEAP 259 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 + A L + P IR L S A + ++ P +L+ + + G N Sbjct: 260 AASELLAQL-EDSPSIRQARSTLEQSRASADLERAKRLPDPTLSLGVKRAQEV---GRN- 314 Query: 323 HWSFGPKLYLPIFD--KGKIKSNIR---RAESSAQEQYITWQETVLNAIKEVENALTSIN 377 FG + LP+ D +G +R +AE Q + Q V A +++E + Sbjct: 315 QLVFGISIPLPVLDTNRGNQIQALRLADQAEEKLQALRVQMQTDVFQAREQLETSRRLAQ 374 Query: 378 E-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 + +++ Q A E K SL G++S LD+LD +R Sbjct: 375 QLSTQVLPTAQTAYEAAVKGFSL-------GKFSYLDVLDAQR 410 >gi|70732679|ref|YP_262442.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346978|gb|AAY94584.1| ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 446 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 14/282 (4%) Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK-SIES 217 +L+ +Y A +ERI ++ Y + ++L+ G ++ +++ +A + ++ Sbjct: 138 RLLSAYSQALLAQERIELSRAQKRAYAERLQLNERLLKGGEGTRTDVLETQARLSLALAQ 197 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRP 276 +I ++ + + ++G P + + + FQ +P DL + N P Sbjct: 198 EIEAQDQQ-DAALRELQAIVGEPLQ--IDELDPLTRQFQIQPLLPNRFDSWRDLAMANNP 254 Query: 277 DIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPKLYLP 333 D+ Q++ L + ++ ++ P +SL S T +S YN + + G ++ LP Sbjct: 255 DLASQQQALRVAEYEVERKRAGHLPKVSLYASSRQTSSDSESSYNQKYDTNTVGIQVSLP 314 Query: 334 IFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +F G + ++ R+A S AQ + T LN +++ N TS V + AV Sbjct: 315 LFAGGSVSASTRQAASQLSQAQFELDAKTATTLNELRKQFNLNTSA---AAKVRAYEMAV 371 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + ++ + + G LD+LD E+ DL+ A+ Sbjct: 372 SSAEALVTATQKSVHGGERVNLDVLDAEQQLFTARRDLADAR 413 >gi|224827007|ref|ZP_03700105.1| type I secretion outer membrane protein, TolC family [Lutiella nitroferrum 2002] gi|224600840|gb|EEG07025.1| type I secretion outer membrane protein, TolC family [Lutiella nitroferrum 2002] Length = 471 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 11/192 (5%) Query: 262 PINI---GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-F 317 P N+ G A + N DI+ QE+ LA + + + P +SL DNS Sbjct: 266 PTNVDLDGWIAQALANNLDIKAQEQNLALASQDLTEKRGQRLPVVSLTAGYKDNTDNSTL 325 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 P + S G +L LP++ G I S +R A ++ + T ++V A + Sbjct: 326 PAHTRASSVGLQLTLPLYAGGGINSRVREAAANENSAKDKLEATRRQVREQVRQAYLGVT 385 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER-------ATAKVEVDLSI 430 +V Q + K + + + G + LD+L E+ AK + + Sbjct: 386 SGAALVKAQQQLLVSAKSKLDSTRLGKEVGVRTNLDLLQAEQEYYNDQTQLAKARYNYLL 445 Query: 431 AKRQLAKSYVDL 442 AK QLA++ L Sbjct: 446 AKLQLAQAAGQL 457 >gi|6118498|gb|AAF04120.1| phosphate transport protein [Burkholderia cepacia] Length = 181 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 13/76 (17%) Query: 11 FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLIN-----------IDTLKWWESFNDT 59 F+ LAGC VGP+Y P L P Q ++ +DT WW F D Sbjct: 39 FVFALAGCAVGPDYKPPAAELAPFQHVPASTSAASQAQGAAAAPAPSLDT--WWTGFQDP 96 Query: 60 SLNKLVKIALQQNLTI 75 L +V AL QNL + Sbjct: 97 MLVSIVDRALAQNLDL 112 >gi|145220447|ref|YP_001131156.1| outer membrane efflux protein [Prosthecochloris vibrioformis DSM 265] gi|145206611|gb|ABP37654.1| outer membrane efflux protein [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 16/193 (8%) Query: 256 QPNLYIPINIGIP--ADLI--RNRPDIRYQE--KKLADSVAKIGIAKSDLYPSLSLNGSI 309 +P + ++ IP AD+ +R D+R E ++LA+ + A++ P L+ Sbjct: 246 EPTGALAVDAEIPSFADVAVEGDRSDLRAMETYRELAEKQGDM--ARAGRIPRLNAFAR- 302 Query: 310 ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 A H F + W G L IFD I ++ A++ +E ++ N++ EV Sbjct: 303 ADNHTADFDTDGSSWMVGMSLEWKIFDGMAISGKVQEAKAREREARYSYDAAKSNSVAEV 362 Query: 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA------- 422 AL S+ K+ V A+E K S+ YR G+ ++L E A Sbjct: 363 ARALRSMRTAKERVGVAGQALEEAKVSLDYIGGQYRTGKAMTFELLMREGAYTYAMMRLN 422 Query: 423 KVEVDLSIAKRQL 435 + + D +AK +L Sbjct: 423 QAKFDYCVAKSEL 435 >gi|212694882|ref|ZP_03303010.1| hypothetical protein BACDOR_04416 [Bacteroides dorei DSM 17855] gi|212662560|gb|EEB23134.1| hypothetical protein BACDOR_04416 [Bacteroides dorei DSM 17855] Length = 447 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 71/327 (21%), Positives = 148/327 (45%), Gaps = 50/327 (15%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYAS---ISHR-------- 107 +L+ + AL++N+ + Q + + ++ + +A LFPS S+++ +++R Sbjct: 27 TLDDCIDYALEKNIQLQQDKISLEESSVDVKTAKAALFPSLSFSTGQNVTNRPYQETSNT 86 Query: 108 ------FIPNLKTNSTGQ--LDSDW-------KIDLFGQRRHIESSLANLDSAYAQVDIA 152 + KT G L++ W +++ QRR + +A L A + + + Sbjct: 87 VSGTEIISSDSKTTYNGNYGLNAQWTLWNGNKRLNTIKQRRTSQQ-IAGL--AVTETENS 143 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 I+++ +I + E + I L + + + F +G+ SK L +LE+++ Sbjct: 144 LQEQIAQI---FIQILYADESVKINRNTLQVSQATYDRGKELFQEGSISKADLAQLESQV 200 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPA 269 S + + T E S R + LL E + + + + QP +P + Sbjct: 201 SSDKYQLVTSESSLRDYKLQLKQLLELDGAEEMDLVLPELADEHVLQP---LPAQEDVYQ 257 Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GY 320 + +RP+I+ + + +S I +AK+ P++SL+ S ++T+ DNS+ G+ Sbjct: 258 QALASRPEIQSSKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGW 317 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRA 347 N G + +PIFD + KS +++A Sbjct: 318 NNM--IGLNINIPIFDNRQNKSAVQKA 342 >gi|302039240|ref|YP_003799562.1| putative outer membrane efflux protein [Candidatus Nitrospira defluvii] gi|300607304|emb|CBK43637.1| putative Outer membrane efflux protein [Candidatus Nitrospira defluvii] Length = 495 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 53/278 (19%), Positives = 118/278 (42%), Gaps = 7/278 (2%) Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + + + L + ++ + + GA + L +V+ E++ +++ + + Sbjct: 201 VDVQRRALGVAEERLRQVEGRAKAGAVAPLDVVEAGQEVQRRREIAIGAQRAVEQEQYKM 260 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR---NRPDIRYQEKKLADSVA 290 S L +++ + +F P +P + AD ++ +RP+IR + + + Sbjct: 261 SMFLWENQAPTAPQLER-APDFPPPTAVPTPEIVRADKLQAKTDRPEIREVDIEAKVNNI 319 Query: 291 KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 + +AK++L PSL L + A + G + FG +L +PI + + + + A++ Sbjct: 320 DLELAKNNLLPSLDLEAAPARAPEKFVLGLG--YRFGVELRMPILQR-RSRGEVMEAQAQ 376 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 A + + + +V+NAL++I K+ V ++ + K + G S Sbjct: 377 ADRLVMVQKYREQQVVVDVDNALSAIERAKERVAAAAESLRMAKTLEEGERFRFSLGATS 436 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +L + ER + E+ L AK K+ A G+ Sbjct: 437 VLFVNLRERNSVDSEMQLVRAKADYQKALALYQWATGT 474 >gi|114046260|ref|YP_736810.1| outer membrane channel protein [Shewanella sp. MR-7] gi|113887702|gb|ABI41753.1| type I secretion outer membrane protein, TolC family [Shewanella sp. MR-7] Length = 435 Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust. Identities = 87/405 (21%), Positives = 165/405 (40%), Gaps = 50/405 (12%) Query: 70 QQNLT----ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWK 125 QQ LT +LQA + NA E I RA L P+ A++ + N N T L K Sbjct: 31 QQALTSDPLVLQAQAQRNALFEKIEQNRAPLLPTISANVGYDKAWNDPKNDTSGLTGSLK 90 Query: 126 ID--LFGQRRHIESSLA-----NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 ++ ++ + SLA DS YA A N+I+++ +Y D K+ Sbjct: 91 LNQVIYDHSAWVGLSLAEKAASQADSNYAS---ALQNLITRVTKAYFDVLTAKDNYEFQG 147 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ +E + +F G T+ + + +A+ + E + + + + G Sbjct: 148 AEKRAIERQLEQTKQRFAVGLTAITDVHEAQAQYDLASATEILAENTLANSYEALREITG 207 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAK 291 K N N + + PA I + +++ +A+ Sbjct: 208 ID--------HKTINVLDTNRFSAV---TPAPTSSSEWLKIAETNSVDLMTQRIGKDIAQ 256 Query: 292 --IGIAKSDLYPSLSLN-----GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNI 344 I + K+ PSLSLN G T D + P ++ + + G L +PIF+ K+ S + Sbjct: 257 ETISLYKAGHMPSLSLNAGYNKGLEQKTGDVNEPDFD-NVNVGVNLSIPIFEGFKVTSQV 315 Query: 345 RRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + A+ E ++T + +K V N ++ + + +V + ++ + + Sbjct: 316 KEAQFQYVEASEKLEQTYRSVVKNVRNNYNNVGASISSIRAYEQSVISSESALKATQAGF 375 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAK---SYVDLYIAI 446 G +++D+L+ R DL +KR+L+ SY++ IA+ Sbjct: 376 EVGTRTIVDVLNRTR-------DLYDSKRKLSDARYSYINSIIAL 413 >gi|332885583|gb|EGK05829.1| hypothetical protein HMPREF9456_02093 [Dysgonomonas mossii DSM 22836] Length = 444 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 73/340 (21%), Positives = 147/340 (43%), Gaps = 41/340 (12%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + A Q+N+ + ++ + +I +A LFPS SIS R+ + + G Sbjct: 32 TLRECIDYARQENIQVKKSIITTESYNVDISQSKAALFPSLSGSISQRYTNSQSPDGAGD 91 Query: 120 ------------LDSDWKIDLFGQRRH--------IESSLANLDSAYAQVDIAKLNVISK 159 L+++W + G+ ++ E+ N ++ Q +IA Sbjct: 92 YHYEGLFNGQYTLNANWTLYNGGKNKNNIKQAQLKKEAQSLNTENIQNQTEIA------- 144 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + +Y+ + +E I I+ ++ ++ S G+ + ++EA+ S + ++ Sbjct: 145 ITQAYLQILYSRESIKNNENIVASDEEQLKQSKEFLDAGSITHSEYAQVEAQYSSDKYNL 204 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + S+ + LL E + + + N+ L+IP + + P++ Sbjct: 205 VQAQSSYESYKLQLKQLLELDYDEDIDIVFPEINDEDILLFIPSKYEVYRRSLNIMPEVA 264 Query: 280 YQEKKLADSVAKIG--IAKSDLYPSLSLNGSIA----LTHDNSFP---GYNTHWSFGPKL 330 KL +A + AK+ P++S+ GSI + SF G N + S G L Sbjct: 265 --NSKLNIQLANLSKSSAKAGYLPTISVTGSIGTGNIFNNSPSFATQIGRNFNQSIGLTL 322 Query: 331 YLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIK 367 +PIFD + KSN+++AE +AQ + I ++T+L I+ Sbjct: 323 SVPIFDNKQNKSNVKKAELDIQTAQLELIDTEKTLLKTIE 362 >gi|240139233|ref|YP_002963708.1| hypothetical protein MexAM1_META1p2661 [Methylobacterium extorquens AM1] gi|240009205|gb|ACS40431.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 565 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 55/281 (19%), Positives = 117/281 (41%), Gaps = 21/281 (7%) Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + SY+D + + + + ++ + + +F GA ++ + + EA + S + Sbjct: 248 VQSYMDVLQNTATLELNRNNVAVLQEQLRQTAFRFQVGALTRTDVAQAEARLALARSQVS 307 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 E ++ ++G + L + NL + IG+ + P I Sbjct: 308 AAESQLGASIGIYRRVIGVEPRQ-LSPGRPLDRPVPGNLDAAVEIGL-----KENPQIAS 361 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGK 339 + + A++ + + LYP + L G +A +D PG N S ++ +PI+ G Sbjct: 362 ALHAVDAAEAQVKVLEGRLYPQVGLTGQVAQRYDQEQPGDNGRTASIVGRITVPIYQGGS 421 Query: 340 IKSNIRRA-----ESSAQEQYITWQ--ETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 + IR+A ++ Q +++ Q V++A ++E A K V Q V+ Sbjct: 422 EYAQIRQAKELVGQTRLQVEFLRDQIRAAVVSAWGQLEAA-------KAQVIASQAQVQA 474 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 ++ ++ R G+ + LD+L+ ++ V L A+R Sbjct: 475 NEVALDGVREEARVGQRTTLDVLNAQQELLNARVQLIQAQR 515 >gi|167719956|ref|ZP_02403192.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei DM98] Length = 120 Score = 45.4 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 45/89 (50%) Query: 362 VLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERAT 421 +L A+++V+NAL + D+ L+ A + + L+ +YR G S +D+LD ER Sbjct: 1 MLLALRDVDNALAAYRTDQTRRDALRDAAAAERTTFELARDSYRHGLVSFIDVLDAEREL 60 Query: 422 AKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 ++ QL V LY A+G G+ Sbjct: 61 SQARQQYVQGSLQLTTDLVSLYKALGGGW 89 >gi|150002802|ref|YP_001297546.1| putative outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] gi|254882304|ref|ZP_05255014.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294777268|ref|ZP_06742723.1| outer membrane efflux protein [Bacteroides vulgatus PC510] gi|319643086|ref|ZP_07997717.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] gi|149931226|gb|ABR37924.1| putative outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] gi|254835097|gb|EET15406.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294448888|gb|EFG17433.1| outer membrane efflux protein [Bacteroides vulgatus PC510] gi|317385254|gb|EFV66202.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] Length = 438 Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 20/246 (8%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL +A ++ AK ++ + +Y+ +E +AH ++L ++ +EL F G Sbjct: 118 NLKAATEDLNKAKEDISISVTSAYLQILFNEELAKVAHNQVELSREQLELKEAYFKNGKA 177 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S+ + + A + E + ++++ + +S LL P + + + + L Sbjct: 178 SEAEVYEARARVAQDEMSAVQADNNYQLALLELSQLLELPTPDGFGVVSPRVEDDFTLLS 237 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----- 315 +P + I A + N+P I+ + +L + I IA+S YP L+ + I + N Sbjct: 238 LPED--IYAQAVLNKPSIKAAQFRLEGAAKNIRIAQSSWYPQLNFSAGIGTNYYNISGVE 295 Query: 316 --SFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW--QETVLNAI 366 SF +N + F L +P+F++ ++ ++ A Q ++W +E+ Sbjct: 296 NASFSSQWHQNFNKYLQFS--LSIPLFNRFDTRNKVKNAR--IQRTALSWKLEESKKALF 351 Query: 367 KEVENA 372 KE++ A Sbjct: 352 KEIQQA 357 >gi|260771253|ref|ZP_05880180.1| type I secretion TolC precursor [Vibrio furnissii CIP 102972] gi|260613850|gb|EEX39042.1| type I secretion TolC precursor [Vibrio furnissii CIP 102972] gi|315179141|gb|ADT86055.1| outer membrane protein TolC [Vibrio furnissii NCTC 11218] Length = 439 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 17/178 (9%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNG--SIALTHDNSFPGYNTH-----WSFGPKLYLPI 334 +++ VAK I +A S PSL+L+G + +++++ YNT+ ++ G L +P+ Sbjct: 248 RISQDVAKDNISLASSGHLPSLTLDGGYNYGREYNDNYSSYNTYHENNDFNIGLNLTIPL 307 Query: 335 FDKGKIKSNIRRAE----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 + G + S ++AE +++Q+ ++ V N ++ N +IN V + +V Sbjct: 308 YSGGNVSSQTKQAEYAYVAASQDLEAAYRSVVKN-VRAYNN---NINASIGSVRAYEQSV 363 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + + G +++D+LD R V+ +LS A+ S + L A+G+ Sbjct: 364 ISAQSALDATEAGFDVGTRTIVDVLDATRTLYSVKKNLSDARYNYIISVLQLRQAVGT 421 >gi|149279613|ref|ZP_01885742.1| putative outer membrane transport/efflux protein [Pedobacter sp. BAL39] gi|149229649|gb|EDM35039.1| putative outer membrane transport/efflux protein [Pedobacter sp. BAL39] Length = 457 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 61/324 (18%), Positives = 135/324 (41%), Gaps = 45/324 (13%) Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 LD+ A + K ++I ++I SY+ + K+ + A+Q L + K+ ++ G + Sbjct: 132 LDAGKANTEKVKNDLILQVITSYLQILYNKDFLRAANQQLAVAKQQLDREQQLLDVGNKT 191 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP-ATEF------LHYMQKQSNN 254 L + ++++ + E + + + ++ ++ L+ P AT++ L + S Sbjct: 192 LADLSQAKSQLATAELSVTDADNALTISYLTLAQLMDVPSATKYEVQAPLLDSFKTPSVK 251 Query: 255 FQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD 314 + P+ I D + PDI+ + A + + +AK LYP LS + + ++ Sbjct: 252 YNPD-------QIFGDAMNLFPDIKLAALRTAAAKKGVDVAKGSLYPKLSFSAGLGSSYS 304 Query: 315 NSFPGYNT----------------HWSFGPKLYLPIFDKGKIKSNIRRA-----ESSAQE 353 F GY+ + S G L +P+F+ + ++ ++RA ++ E Sbjct: 305 YIF-GYDNALFPQRSFADQVNERFNQSIGLNLSIPLFNGLQARAGVKRARINLLQTQTDE 363 Query: 354 QYI--TWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q + + A+ ++ A + + A E+ ++ ++ ++N Sbjct: 364 QLAKNNLNKVIYQAVADLRAAESRFRSTTNTYIAQKDAFEVIEQRYAVGLVNS------- 416 Query: 412 LDILDIERATAKVEVDLSIAKRQL 435 LD + K E+D+ AK L Sbjct: 417 LDYSTAQTNMNKAEIDMIQAKYDL 440 >gi|317403458|gb|EFV83967.1| outer membrane multidrug efflux protein [Achromobacter xylosoxidans C54] Length = 240 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 44/239 (18%), Positives = 114/239 (47%), Gaps = 22/239 (9%) Query: 5 RAIFSLFIVLLAGCTV---GPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSL 61 R + + ++ L+GC + GPE P L + +G + + KWW+ + D+ L Sbjct: 3 RLLSTALVLALSGCALMEPGPE---PVAAL--NEAKLGLTGQAVAWPETKWWQRYGDSQL 57 Query: 62 NKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS-------ISHRFI----- 109 + L+ AL + ++ A R+ A + + RA L P A+ +S +I Sbjct: 58 DTLMDEALANSPSMTAAQARLAKANAAVSTARAPLMPRVDANYTLNREHLSADYIYPAPL 117 Query: 110 -PNLKTNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDA 167 ++ + + LD +++D +G+ R H++++++ +A A A+ + S + +Y++ Sbjct: 118 GGSVVSENRLALDFSYELDFWGKNRSHLKAAVSQQAAAEADAQAARNVLASATVRAYLNL 177 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + + ++L ++ + L+ +++ G +++ + + E+ + + + ++ E + Sbjct: 178 QDAFAQRDVIKRVLAQREEVLSLTRGRYSAGLDTQVEVKQAESSLAAGQVELTQTETTL 236 >gi|325922050|ref|ZP_08183848.1| outer membrane efflux protein RaxC [Xanthomonas gardneri ATCC 19865] gi|325547460|gb|EGD18516.1| outer membrane efflux protein RaxC [Xanthomonas gardneri ATCC 19865] Length = 460 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 18/192 (9%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT--------- 322 I + P ++ Q+ +++ + A++ A++ YP+L+L SI T NS+ G T Sbjct: 242 IADNPALKAQQLQVSAAEAQVNAARAGHYPTLNLGASIGRT--NSWGGGGTVDQIGGNFT 299 Query: 323 -------HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 S G L +PIF G +S +R+A S Q T+++ + NA + Sbjct: 300 TNNLNIDTDSIGITLSIPIFAGGATQSAVRQALSRRDIQQDTYEQQKRALDRNTRNAYQT 359 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + V + AV + + S + G ++LD++ +R + +++ + ++ Sbjct: 360 VVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYNF 419 Query: 436 AKSYVDLYIAIG 447 ++ + L AIG Sbjct: 420 LQNRLLLGQAIG 431 >gi|260581556|ref|ZP_05849358.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|260091789|gb|EEW75750.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 315 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 32/189 (16%), Positives = 82/189 (43%), Gaps = 1/189 (0%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 +N+ +P +I NRPD++ + +L+ + + +P ++L S++ T + Sbjct: 126 VNLNVPVSVIANRPDVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHN 185 Query: 323 HWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + G + LP + +K N++ +E+ + + +++ + A+ V+ + + + Sbjct: 186 PVAAGTVGISLPFLNWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQS 245 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 ++ LQ +++ Y G L + L ++ + AK Q+ +S Sbjct: 246 TLSNLQQTHSYNQRITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENA 305 Query: 442 LYIAIGSGY 450 +Y ++ Y Sbjct: 306 VYSSMAGYY 314 >gi|405964|gb|AAA60501.1| yohG [Escherichia coli] gi|315136771|dbj|BAJ43930.1| multidrug resistance outer membrane protein [Escherichia coli DH1] gi|744177|prf||2014253AL yohG gene Length = 398 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 61 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 120 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 121 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 169 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 170 VAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 229 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 230 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 289 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 290 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 344 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 345 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 396 >gi|307311282|ref|ZP_07590926.1| outer membrane efflux protein [Escherichia coli W] gi|306908788|gb|EFN39285.1| outer membrane efflux protein [Escherichia coli W] Length = 396 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 145/352 (41%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 59 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 118 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 119 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 167 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 168 VAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 227 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 228 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 287 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 288 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 342 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 343 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 394 >gi|325300141|ref|YP_004260058.1| outer membrane efflux protein [Bacteroides salanitronis DSM 18170] gi|324319694|gb|ADY37585.1| outer membrane efflux protein [Bacteroides salanitronis DSM 18170] Length = 440 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 77/378 (20%), Positives = 160/378 (42%), Gaps = 35/378 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 +L + + A++ NLTI Q ++ + + + P + AS S F +L+ ++T Sbjct: 24 TLKQCIDYAIEHNLTIKQQEANAEQSRVELSTAKNSRLPNLAGSASQSFSFGRSLQADNT 83 Query: 118 --------GQLDSDWKIDLFGQRR---HIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + LF + +I S NL +A ++ AK N+ ++ +Y+ Sbjct: 84 YNTINTQNTSFSLSTSVPLFTGMQIPNNIALSKLNLQAALEDLNAAKENISIQVASAYLQ 143 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E +A + + L K+ + F G S+ L + ++ + E + + Sbjct: 144 VLFNEELAEVAREQVSLSKEMLAQREAFFQNGKASESELYEAKSRVAQDELSAVQADNDY 203 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN----RPDIRYQE 282 R+++ ++S LL + + +++ + +L P+ PAD+ +P I+ + Sbjct: 204 RLSLLDLSQLLELSSPDGFTIASPEADVIE-SLGTPL---PPADIYSEALLIKPTIKAAQ 259 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS----------FGPKLYL 332 +L + I IA+S+ YP LSL ++ + N N+++ G L + Sbjct: 260 YRLEGAQKSIRIAQSEYYPQLSLGAGLSTNYYNMSGRENSNFGSQLRDNFSQYVGLTLSV 319 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 PIF++ ++ +R A Q+ + WQ ++ N KE++ A + + + A Sbjct: 320 PIFNRLATRNRVRSAR--IQQTTLGWQLEDSKKNLYKEIQQAYYNTLSAQTQYASSRTAT 377 Query: 391 ELHKKSMSLSMINYRQGR 408 E + S L Y G+ Sbjct: 378 EAAQASFDLMKEKYLNGK 395 >gi|332760828|gb|EGJ91116.1| cation efflux system protein cusC domain protein [Shigella flexneri 4343-70] Length = 94 Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 15 LAGCTVGPEYTKPHMPLLPTQFSIGNSKNLI-----NIDTLKWWESFNDTSLNKLVKIAL 69 L GC++ P+Y +P MP +P QFS+ S+N + N + W F D + L+ AL Sbjct: 5 LTGCSLAPDYQRPVMP-VPQQFSL--SQNGLVNAADNYQNVGWRTFFVDNQVKTLISEAL 61 Query: 70 QQNLTILQATERINAAKENILSVRADLFP 98 N + AT ++ A+ AD +P Sbjct: 62 VNNRDLRMATLKVQEARAQYRLTDADRYP 90 >gi|24052572|gb|AAN43745.1| putative enzyme [Shigella flexneri 2a str. 301] Length = 356 Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 144/352 (40%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 19 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 78 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS + +E+DI R +++ Sbjct: 79 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VDGVETDINA--SKTRQQLND 127 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 128 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 187 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 188 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 247 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 248 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 302 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 303 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIRLTGALGGGY 354 >gi|281422586|ref|ZP_06253585.1| putative outer membrane efflux protein [Prevotella copri DSM 18205] gi|281403410|gb|EFB34090.1| putative outer membrane efflux protein [Prevotella copri DSM 18205] Length = 502 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 51/298 (17%), Positives = 118/298 (39%), Gaps = 29/298 (9%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y A K++ +A DL KK E H QG +K +K++ ++ E I Sbjct: 207 AYWLAVSLKQKQKLAISYRDLVKKLNEDVHKMIQQGVATKADGLKVDVKVNEAEMQITQA 266 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL----------- 271 E ++ + L G P + + + + G P D Sbjct: 267 EDGLALSKMLLCQLCGIPMNQEITLADEDKETLALS-------GTPVDTEQQKVAAQDSA 319 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFG 327 + RP++R + L S A + ++ P + L G +++ N F G+ W+ G Sbjct: 320 LNTRPELRMLQNALDISKAATNMVRAINLPHVMLTGGYMISNPNVFNGFQKKFTGVWNVG 379 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +++P+++ +R A++++ + +T ++ + + E +K + Sbjct: 380 VMVHVPVWNWFDGAYKVRAAKAASNIAQMNLDDTREKIHLQITQSQFKVKEAQKKLNMAM 439 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK-------VEVDLSIAKRQLAKS 438 + +++ + + +++G + D++ + A K E+D+ + + L K+ Sbjct: 440 KNIASADENLRCANLGFKEGVMEVTDVMAAQTAWQKAQSQKIDAEIDVKLTQVGLNKA 497 >gi|16273250|ref|NP_439491.1| hypothetical protein HI1340 [Haemophilus influenzae Rd KW20] gi|1175736|sp|P44165|Y1340_HAEIN RecName: Full=Uncharacterized protein HI_1340 gi|1574800|gb|AAC22986.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 441 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/189 (16%), Positives = 82/189 (43%), Gaps = 1/189 (0%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 +N+ +P +I NRPD++ + +L+ + + +P ++L S++ T + Sbjct: 252 VNLNVPVSVIANRPDVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHN 311 Query: 323 HWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + G + LP + +K N++ +E+ + + +++ + A+ V+ + + + Sbjct: 312 PVAAGTVGISLPFLNWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQS 371 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 ++ LQ +++ Y G L + L ++ + AK Q+ +S Sbjct: 372 TLSNLQQTHSYNQRITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENA 431 Query: 442 LYIAIGSGY 450 +Y ++ Y Sbjct: 432 VYSSMAGYY 440 >gi|42522560|ref|NP_967940.1| outer membrane efflux protein [Bdellovibrio bacteriovorus HD100] gi|39575092|emb|CAE78933.1| outer membrane efflux protein [Bdellovibrio bacteriovorus HD100] Length = 494 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 17/185 (9%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L I + +Y+ +FKE S+A + D YKK ++ K + G ++ L +++AE + Sbjct: 189 LEAIRQFWNTYVAQENFKE--SVASR--DRYKKLVDAVKRKTSLGYSNPGDLPQVQAEFE 244 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGY-PATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + E + T + N+ N+ TLL P TE FQ IP +P + Sbjct: 245 TREQKVKTSSTEYLDNLENLVTLLSLEPGTEI---------RFQIPGNIPAVPKLPLKKV 295 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT--HDNSFPGYNTHWSFG-PK 329 + IR Q+ K+ + + A+S YP+L+ G + T +N+ Y+ S PK Sbjct: 296 EDLRTIRSQKLKVEAAQESLTAAESLSYPTLNFVGRVYTTGVDENANDAYSDVVSGTRPK 355 Query: 330 LYLPI 334 Y+ + Sbjct: 356 YYMGL 360 >gi|291287247|ref|YP_003504063.1| outer membrane efflux protein [Denitrovibrio acetiphilus DSM 12809] gi|290884407|gb|ADD68107.1| outer membrane efflux protein [Denitrovibrio acetiphilus DSM 12809] Length = 420 Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust. Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 25/307 (8%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 + K ++I ++ID +R+++A+ L + ++ + L + G +K ++K+ Sbjct: 118 TEAVKQDIILSARKAFIDVLAAIDRVTVANNAYVLLENQLKDTTLSYEVGYVAKNEVLKV 177 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 +AE+ S ++ + + S R V N+ L+ TE F P P IG Sbjct: 178 KAELASSMQNVLSAKSSVRTAVFNLEKLMN---TEL-----DSGERFIPLSSYPEEIGTY 229 Query: 269 ADL----IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG----- 319 L + NR +++Y + + I K PS+ + + ++ P Sbjct: 230 KTLREIMVTNRSELKYLNELINAKNYSIKSTKGGYLPSVEIGAAYNTYGEDMSPSGRDYT 289 Query: 320 YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI----TWQETVLNAIKEVENALTS 375 Y+ K+ L +FD G K N R S QE + T +ET N +++NAL + Sbjct: 290 YDNETVLSLKVNLSVFD-GLNKYNTTR---SLQEDKLSMINTMRETKANMSLQLKNALEN 345 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + K +T + +E +++ ++ ++Q + D+LD + E + AK + Sbjct: 346 FDLAKASLTSAESELESAQENYRITQNQFKQKVATNTDLLDARVMLTRAENTYNNAKFDI 405 Query: 436 AKSYVDL 442 ++ D+ Sbjct: 406 HRAVADV 412 >gi|325915302|ref|ZP_08177622.1| outer membrane efflux protein RaxC, TolC family [Xanthomonas vesicatoria ATCC 35937] gi|325538495|gb|EGD10171.1| outer membrane efflux protein RaxC, TolC family [Xanthomonas vesicatoria ATCC 35937] Length = 464 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 38/179 (21%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--------DNSFPGYNTH 323 I + P ++ Q+ +++ + A++ A++ YP+LSL ++ ++ D + + T+ Sbjct: 246 IADNPALKAQQLQVSAAEAQVNAARAGHYPTLSLGANVGRSNSWGGQGAADQAAGNFTTN 305 Query: 324 W------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------ETVL 363 S G L +PIF G +S +R+A S Q T++ +TV+ Sbjct: 306 GRDIDTDSIGVTLSIPIFAGGATQSAVRQALSRRDIQQDTYEQQKRALDRNTRNAYQTVV 365 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYSLL 412 I EVE ++ + Q +E+ +++++ + +NY Q RY+ L Sbjct: 366 AGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYTFL 424 >gi|224536270|ref|ZP_03676809.1| hypothetical protein BACCELL_01137 [Bacteroides cellulosilyticus DSM 14838] gi|224522111|gb|EEF91216.1| hypothetical protein BACCELL_01137 [Bacteroides cellulosilyticus DSM 14838] Length = 495 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 41/232 (17%), Positives = 101/232 (43%), Gaps = 9/232 (3%) Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 +G +K + ++ + E + +E ++ + L G + + ++ ++ Sbjct: 234 IAEGVATKADGLSVKVRVNEAEMTLTKVEDGLSLSRMLLCQLCGLDLSSPITLKDEREDD 293 Query: 255 FQPNLYIPINI-GIPADLI-RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 P+ P+ GI + + RP++R E K+ + +S+ PSL+L GS +T Sbjct: 294 LSPD---PVAANGIDLNTVYATRPEVRSLELATEIYKQKVNVTRSEYLPSLALMGSYMMT 350 Query: 313 HDNSFPGYNTH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + + F G+ W+ G L +PI+ G+ ++ A++ A+ + + Sbjct: 351 NPSVFNGFEKKFKGMWNVGVVLQVPIWHWGEGMYKVKAAKAEARIAQYQLDDAKEKIELQ 410 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 V ++ +NE K + + +E +++ + + + +G + ++L+ A Sbjct: 411 VNQSVFKVNEAAKKLIMAEKNLEKADENLRYATLGFEEGVIAASNVLEAHTA 462 >gi|15606535|ref|NP_213915.1| hypothetical protein aq_1332 [Aquifex aeolicus VF5] gi|2983760|gb|AAC07320.1| hypothetical protein aq_1332 [Aquifex aeolicus VF5] Length = 415 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/232 (18%), Positives = 107/232 (46%), Gaps = 13/232 (5%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQS 252 K+ G K+ V+ +A+ ++ ++++ + ++ N L T EF+ ++ Sbjct: 163 KYKAGILPKVEYVRAKAQFENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNL 222 Query: 253 N-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS--LNGSI 309 N +F + L +N ++ + ++ + ++K+D YP+L L Sbjct: 223 NEDFSEEKLLEF-------LEKNNSTLKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEG 275 Query: 310 ALTHDNSFPG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 T + F G + ++FG L FD ++ + + + ++ +++T N + Sbjct: 276 YTTRKSLFGGKEWVKGYTFGISLNYKFFDGFAREAEVAQRKVDIFQEKERFKDTFFNVKR 335 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +++NAL I K+ + ++ ++E K+++ L+ +++G + L++LD R Sbjct: 336 DLKNALLEIKSLKERIKAVKLSLEAAKETLKLATERHKEGIGTYLEVLDARR 387 >gi|86134386|ref|ZP_01052968.1| outer membrane efflux protein [Polaribacter sp. MED152] gi|85821249|gb|EAQ42396.1| outer membrane efflux protein [Polaribacter sp. MED152] Length = 443 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 69/341 (20%), Positives = 141/341 (41%), Gaps = 75/341 (21%) Query: 108 FIPNLKTNSTGQLDSDWKID----------LFGQRRHIESSL--------------ANLD 143 F+PNL N+ G L+ D FG ++ S + A L Sbjct: 60 FLPNLSGNTGGNLNFGTGFDPVSQDRVNTSFFGGSINLSSGITVFNGFRNTNIYKQAQLG 119 Query: 144 SAYAQVDIAKL-NVISK-LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 +++D+ K+ N IS ++ Y++ KE ++ A ++ +K IE + +F G Sbjct: 120 VESSKLDLKKIENDISLFVVNGYLNVLFAKENLNAARVQYEISEKQIEAAESRFKSGVIP 179 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 K L+ ++ S + + E + + + N++ LL PA F Sbjct: 180 KGDLLNTQSTAASNLQTVISNENALDLALLNLAQLLQVPAEGFD--------------VA 225 Query: 262 PINIGIPAD-------------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 P+++G P++ + N P+I + + ++ I I+K+D PS++ + Sbjct: 226 PVDVGTPSENLFYTNSSNVYEKSLNNLPEIERAKLAIDNAALGIEISKADFLPSITASAG 285 Query: 309 IALTHD---NSFPGY-----------NTHWSFGPKLYLPIFDKGKIKSNIRRA------- 347 ++ + N PG+ N + G + +PIF++ + ++ + +A Sbjct: 286 VSTNYGYNLNLPPGFSNTDFFDQINDNLGYGLGFNVRIPIFNRFQTRNRVSQAEINKDIF 345 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 E+ + + + Q+T+ + +V+ AL S E KI + Q Sbjct: 346 ETRLESEKLNLQQTIEQSFLDVKTALKSY-EAAKISLEAQE 385 >gi|299146071|ref|ZP_07039139.1| cation efflux system protein CzcC [Bacteroides sp. 3_1_23] gi|298516562|gb|EFI40443.1| cation efflux system protein CzcC [Bacteroides sp. 3_1_23] Length = 421 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 73/359 (20%), Positives = 156/359 (43%), Gaps = 22/359 (6%) Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT-----NSTGQL--D 121 L++NL+++ I+ A+ +L +A LF + S+ L G++ Sbjct: 37 LERNLSLIAERYNIDMAQAQVL--QAKLFENPVISLEQNVYNRLNGKYFDFGKEGEMVVG 94 Query: 122 SDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQI 180 + I L GQR + ++ N + A Q + + +L +++ + ISI + Sbjct: 95 IEQVIRLAGQRNKQVKLEKINKEIAEYQFEEVMRTLRQELNETFVQVYFLSKSISIYEKE 154 Query: 181 LDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP 240 ++ ++ + L+ +G S + + +LE+ + S++ + E ++ LL P Sbjct: 155 VNSLQELLAGMKLQQEKGNISLMEMSRLESMLFSLKKEKNERENELLTLRGELNVLLNLP 214 Query: 241 ATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + + Q +L ++ ++ RPD++ ++ S A + + KS + Sbjct: 215 GDTMVELSLDEEVLKQLDLS-QLSFADLKAMVNERPDLKIARSTVSASRANLKLQKSMAF 273 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 P S+NGS +D + N +++ G L +PIF++ + N++ A S Q+ + Sbjct: 274 PEFSVNGS----YDRAGNFINNYFAIGVSLSVPIFNRN--QGNVKAARFSIQQAGAEQEN 327 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHK---KSMSLSMINYRQGRYSLLDILD 416 A E+ A S+ DK + +EL + K ++ N+++ SLL+ +D Sbjct: 328 AANRADMELYTAYASL--DKAVQLYQSTNMELERNFEKLIAGVNENFKKRNISLLEFID 384 >gi|116624223|ref|YP_826379.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] gi|116227385|gb|ABJ86094.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] Length = 691 Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust. Identities = 85/405 (20%), Positives = 161/405 (39%), Gaps = 68/405 (16%) Query: 95 DLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 D P ++S NL N G ++ I + + HI D + Q IA + Sbjct: 271 DFNPVDQGAVSFSITQNL-LNGFGVKVNNRAIRIAKNQLHIS------DLTFKQQVIATV 323 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDL----YKKNIELSHLKFTQGATSKLSLVKLEA 210 N + L Y D F + + + + L+L Y N + L GA +++ +++ EA Sbjct: 324 NNVVNL---YWDLVSFNDSLKVQQKTLELNTQLYTDNKRRAEL----GALAEIDIIQAEA 376 Query: 211 EIKSIESDIPTLEKSF---RMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNLYIPINI 265 E+KS + D+ T E M + + T G+ PA + N I Sbjct: 377 EMKSSQQDVVTAETQVIQQEMILKGVITRSGFNNPAVAAARIVPTDHFNVPAQDAIQPTQ 436 Query: 266 GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-----NGSIALTHDNSFP-- 318 + + + RP+I + L D+ + K++L PSLS+ N +A + NS P Sbjct: 437 DMVTEAFQKRPEIEQSQIGLEDARINMLGTKNNLLPSLSVFANLSNNGLAGSA-NSLPVP 495 Query: 319 -------------------------GYNT-----------HWSFGPKLYLPIFDKGKIKS 342 GY + ++S G +L +PI ++ ++ Sbjct: 496 LVGPGGQIIGYRQRTPGDVNGFFLGGYGSFLNQIFSRNFPNYSAGFQLNVPIRNRAN-QA 554 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 ++ E + ++ I ++ N + V NA ++ + + + A +L ++ ++ Sbjct: 555 DLITDELNYRQSQIQDRQLQNNIKQNVINAQITLKQARAVYETAVQARKLQEQVLAGERR 614 Query: 403 NYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 Y G S+L+++ ++R T EV A+ Q K+ L +G Sbjct: 615 KYELGTSSILNVVIVQRDTTTREVAEVNARSQYIKARTSLENVVG 659 >gi|310779023|ref|YP_003967356.1| outer membrane efflux protein [Ilyobacter polytropus DSM 2926] gi|309748346|gb|ADO83008.1| outer membrane efflux protein [Ilyobacter polytropus DSM 2926] Length = 758 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 83/431 (19%), Positives = 181/431 (41%), Gaps = 71/431 (16%) Query: 65 VKIALQQNL-TILQATERINAAKENILS-------VRADLFPSSYASISHRFIPNLKTN- 115 VK++L+ L + + + + K++++S +A L P+ A+ + N + Sbjct: 313 VKLSLKDALYKLFENNTELKSKKQDLVSSSYDVKIAKAALKPNLTATFDYDKQDNTRARL 372 Query: 116 -STGQLDSDWKIDLFGQRRHIESSLANL-------DSAYAQVDIAKLNVISKLIPSYIDA 167 STG +S Q + ES+ +N+ D+ ++ +++ I LI +Y+ Sbjct: 373 YSTGAENSLQVGGKISQTLYDESTFSNITIQKKLYDAVKGEMRGKEISQIQSLIEAYLGL 432 Query: 168 RHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI-------KSIESDI- 219 K R I ++L K+ + L+ K++ G+ + + E+E+ + I+SDI Sbjct: 433 LKSKSRFEIEKYNMNLVKRYLSLAKTKYSIGSGGPEDVYRFESELADSVTNLEDIKSDIL 492 Query: 220 -----------PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP------ 262 +++ F ++ I ++G+ Y+ + NF+ L P Sbjct: 493 SGNSELNRLLGSSMDTYFSLSEDGIGDIIGF-------YLFR---NFENELNKPWKFDKI 542 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY-PSLSLNGSI--------ALTH 313 N I L N +I+ + K+A ++ AK Y P+++ +G+ Sbjct: 543 KNYFIEQGL-ENSSEIKSMDAKIAAKERELKAAKRKRYVPTVTASGNYDRDVVDPWGTGS 601 Query: 314 DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 DNS + +W+ G +PI+ G++ ++ E+ + + + V K + + Sbjct: 602 DNS--DSDEYWNAGVGFSIPIYKGGELTYTKKQLEAELDKLKLDRKTMVSEISKNISSQY 659 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD-------IERATAKVEV 426 ++ + + + + E +K++ L Y +G+ ++ D+LD E+ V+ Sbjct: 660 AKVSAAYRKIRSAEKSAESSRKNLKLKTELYVKGKITITDMLDARNSLIGAEQKKTSVKF 719 Query: 427 DLSIAKRQLAK 437 D I++ L K Sbjct: 720 DFFISQAMLEK 730 >gi|254507491|ref|ZP_05119625.1| outer membrane channel protein [Vibrio parahaemolyticus 16] gi|219549561|gb|EED26552.1| outer membrane channel protein [Vibrio parahaemolyticus 16] Length = 441 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 92/415 (22%), Positives = 177/415 (42%), Gaps = 32/415 (7%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPN 111 +F DT L ++ A + + T+L A + +AA E + S R+ L P S+ R + Sbjct: 20 AFADT-LAEIYNQAKENDPTLLSAAAQRDAAFEAVTSSRSTLLPQISLKASYDINRGEQD 78 Query: 112 LKTNSTGQLDSD---WKIDL-FGQRRHIESSLANLD----------SAYAQVDIAKLNVI 157 L NS G++D+D + + F Q + SS LD ++YA V A +I Sbjct: 79 L--NSGGKVDTDSNQFGASIGFSQELYKRSSWVTLDIAEKTARQADASYAAVQQA---LI 133 Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ +Y D ++ + + +E + +F G ++ + +A+ ++ + Sbjct: 134 LRVAQAYFDVLRAQDNLEFVQAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQYDAVLA 193 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 D E S + + + G + L + + + N PI I +N Sbjct: 194 DEVLAENSLINSYEGLREITGQEHAQ-LDVLDTKRFSASRN-STPITQLIEEAQEKN--- 248 Query: 278 IRYQEKKLADSVAK--IGIAKSDLYPSLSLNGSIALTH-DNSFPGYNT-HWSFGPKLYLP 333 + ++A VAK I +A S PSL+L+G +L+ NS Y+ +++ G L +P Sbjct: 249 LSLLSSRIAQDVAKDKISLASSGHLPSLTLDGGYSLSDVSNSSNDYDADNFNVGINLEVP 308 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 ++ G I S ++AE S + + +K+V +I+ + + V Sbjct: 309 LYTGGNISSQTKQAEYSYVAASQDLEAQYRSVVKDVRAFNNNISASIGALRAYEQTVVSA 368 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + + G +++D+LD R +LS A+ S + L AIG+ Sbjct: 369 ESALEATEAGFDVGTRTIVDVLDSTRRLYDANKNLSNARYDYILSELQLRQAIGT 423 >gi|213584303|ref|ZP_03366129.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 277 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 15/199 (7%) Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 +P +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 85 LPSQLGYS--LLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLF 142 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + Sbjct: 143 RHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV- 201 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAK 432 + + K QH ++ + ++ Q R++ I + AK+ + + + + Sbjct: 202 --ETLAQKNQHQQQIEHDAQ--RVVGLAQARFNAGIIAGSRVSEAKIPALREQCNGLLLQ 257 Query: 433 RQLAKSYVDLYIAIGSGYN 451 Q + + L A+G GY+ Sbjct: 258 GQWLDASIQLTSALGGGYH 276 >gi|320352971|ref|YP_004194310.1| outer membrane efflux protein [Desulfobulbus propionicus DSM 2032] gi|320121473|gb|ADW17019.1| outer membrane efflux protein [Desulfobulbus propionicus DSM 2032] Length = 447 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 52/277 (18%), Positives = 108/277 (38%), Gaps = 11/277 (3%) Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E + L+ ++ ++ +F +G+ K ++ LE + E + R+ Sbjct: 173 ESVRSRQSALEAISASLAVAQARFEEGSLLKEEVLNLEVQRARAEEQLIQARHGLRLAQR 232 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 LLG + ++ P+ I D NRP++ + A+ Sbjct: 233 GFLHLLG---------LTGETVTLDPSATPAQEIPGERD-PHNRPELTAMAALVKAREAQ 282 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 A++ YP+ GS + G W+ G +L +F+ G+ + RA++ Sbjct: 283 ARQARAGYYPTADAFGSYQVDKGTELDDGSGNSWTTGVRLNYTLFNGGQTSAATERADAQ 342 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 +E + L EVE A ++ ++ + + VE ++S LS + +++G Sbjct: 343 LREAKEQQHKLELALNLEVEQAALALQQETERLAVTGKMVESAEESARLSRLRFKEGVVL 402 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +++D E + ++A A + DL A+G Sbjct: 403 SSELIDTENRLTDARLSHTLATAAHAIAIADLRRAVG 439 >gi|255008658|ref|ZP_05280784.1| outer membrane efflux protein [Bacteroides fragilis 3_1_12] Length = 475 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 44/258 (17%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ + + +A+LD A ++ DI + + +YI + E + + L + + + Sbjct: 144 EQEKLNNRVADLDVATSENDIRQ-----SIAQTYIQILYAAESVKVNENTLQVSEAQRDR 198 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 G+ ++ +LEA++ + + T + +TL Y Sbjct: 199 GKQLLDAGSIARSDYAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELD 248 Query: 251 QSNNFQPNLYIPI----NIGIP----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSD 298 Q +Y+P+ N+ P AD+ + RP+I + + S IGIA+S Sbjct: 249 GEQEMQ--IYLPVLGDENVLSPLPTKADVFQAAVALRPEIEASKLSVEASELGIGIARSG 306 Query: 299 LYPSLSLNGSIALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 PS+SL I H D +F G+N S G + +PIF+ + KS + +A+ Sbjct: 307 YLPSVSLTAGIGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVEKAKL 364 Query: 350 SAQEQYITWQETVLNAIK 367 QY T Q T+L+ K Sbjct: 365 ----QYQTSQLTLLDEQK 378 >gi|313651244|gb|EFS15642.1| outer membrane efflux family protein [Shigella flexneri 2a str. 2457T] gi|332755759|gb|EGJ86120.1| outer membrane efflux family protein [Shigella flexneri K-671] gi|332756458|gb|EGJ86809.1| outer membrane efflux family protein [Shigella flexneri 2747-71] gi|332765949|gb|EGJ96159.1| outer membrane efflux family protein [Shigella flexneri 2930-71] gi|333016712|gb|EGK36041.1| outer membrane efflux family protein [Shigella flexneri K-304] Length = 362 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 144/352 (40%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS + +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VDGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 134 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 193 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 194 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 253 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 254 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 308 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 309 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIRLTGALGGGY 360 >gi|313146392|ref|ZP_07808585.1| outer membrane efflux protein [Bacteroides fragilis 3_1_12] gi|313135159|gb|EFR52519.1| outer membrane efflux protein [Bacteroides fragilis 3_1_12] Length = 467 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 44/258 (17%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ + + +A+LD A ++ DI + + +YI + E + + L + + + Sbjct: 136 EQEKLNNRVADLDVATSENDIRQ-----SIAQTYIQILYAAESVKVNENTLQVSEAQRDR 190 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 G+ ++ +LEA++ + + T + +TL Y Sbjct: 191 GKQLLDAGSIARSDYAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELD 240 Query: 251 QSNNFQPNLYIPI----NIGIP----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSD 298 Q +Y+P+ N+ P AD+ + RP+I + + S IGIA+S Sbjct: 241 GEQEMQ--IYLPVLGDENVLSPLPTKADVFQAAVALRPEIEASKLSVEASELGIGIARSG 298 Query: 299 LYPSLSLNGSIALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 PS+SL I H D +F G+N S G + +PIF+ + KS + +A+ Sbjct: 299 YLPSVSLTAGIGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVEKAKL 356 Query: 350 SAQEQYITWQETVLNAIK 367 QY T Q T+L+ K Sbjct: 357 ----QYQTSQLTLLDEQK 370 >gi|150007696|ref|YP_001302439.1| cation efflux system protein CzcC [Parabacteroides distasonis ATCC 8503] gi|149936120|gb|ABR42817.1| cation efflux system protein CzcC [Parabacteroides distasonis ATCC 8503] Length = 419 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 33/160 (20%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 L+ RPD++ + + S A + + +S +P +S+ G T+D + N +W+ G + Sbjct: 242 LLYERPDLKLAQASVKASEADVRLQRSLAFPEVSVKG----TYDKAGNFINDYWAIGLSV 297 Query: 331 YLPIFDK--GKIK-SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 LPIF++ G I+ + I A+ + +E+Y A ++ EN L + +L+ Sbjct: 298 SLPIFNRNQGNIRAAKISVAQKAHKEEY---------ARRQAENELFT------SYARLE 342 Query: 388 HAVELHK-------KSMSLSM----INYRQGRYSLLDILD 416 A++L++ K +L + +N+++ SLL+ +D Sbjct: 343 KAIQLYRSSNYGLEKDFALIIEGVNLNFQKRNISLLEFID 382 >gi|307317031|ref|ZP_07596472.1| type I secretion outer membrane protein, TolC family [Sinorhizobium meliloti AK83] gi|306897119|gb|EFN27864.1| type I secretion outer membrane protein, TolC family [Sinorhizobium meliloti AK83] Length = 456 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 63/305 (20%), Positives = 127/305 (41%), Gaps = 45/305 (14%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES----D 218 SY + ++ +SI Q L ++ + + + G ++ + + EAE+ + +S Sbjct: 141 SYANIARDQQVVSIRRQNLAFLREQLSAAQARLEVGEGTRTDVSQAEAELANAQSLLVAA 200 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL------- 271 I L++S + V ++G T QP P +P L Sbjct: 201 IAQLKQSEAVYVQ----IVGAAPTGI----------RQPG---PATKAMPRSLDQAVATG 243 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-NTHWSFGPKL 330 +R P I + + + ++ A+ + P + L G++ N+ G +T S +L Sbjct: 244 LRENPQILAAQYAVDSAGYQVKSAEGTMLPGVVLQGAVTRNTGNAGQGLDDTTASVTARL 303 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYI-------TWQETVLNAIKEVENALTSINEDKKIV 383 +PI+ G IR+A+ +Q I + Q+TV++A ++E+AL I + + Sbjct: 304 EVPIYQGGAEYGQIRQAKEILGQQRILVDSARASVQQTVVSAHAQLESALARIKASRSQI 363 Query: 384 TKLQHAVELHKKSMSLSMINYRQ-GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 A+E ++ R+ G+ + LD+L ++ + L+ A+R + L Sbjct: 364 AAANLALE--------GVVEERKVGQRTTLDVLISQQDVLDAQESLAGAQRDAVVASYAL 415 Query: 443 YIAIG 447 A+G Sbjct: 416 LAAMG 420 >gi|301170085|emb|CBW29689.1| unnamed protein product [Haemophilus influenzae 10810] Length = 441 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/189 (16%), Positives = 82/189 (43%), Gaps = 1/189 (0%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 +N+ +P +I NRPD++ + +L+ + + +P ++L S++ T + Sbjct: 252 VNLNVPVSVIANRPDVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHN 311 Query: 323 HWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 + G + LP + +K N++ +E+ + + +++ + A+ V+ + + + Sbjct: 312 PVAAGTVGISLPFLNWNTVKWNVKISEADYETARLNYEQRITTALNNVDTNYFAFTQAQS 371 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 ++ LQ +++ Y G L + L ++ + AK Q+ +S Sbjct: 372 TLSNLQQTHSYNQRITQYYRNRYNAGVSELREWLVAANTEKSSQLAILNAKYQVLQSENA 431 Query: 442 LYIAIGSGY 450 +Y ++ Y Sbjct: 432 VYSSMAGYY 440 >gi|307564669|ref|ZP_07627199.1| putative septum site-determining protein MinC [Prevotella amnii CRIS 21A-A] gi|307346597|gb|EFN91904.1| putative septum site-determining protein MinC [Prevotella amnii CRIS 21A-A] Length = 498 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 58/281 (20%), Positives = 122/281 (43%), Gaps = 13/281 (4%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE---SDI 219 +Y A K++ +A + DL KK + +G +K +K+ + + E S I Sbjct: 206 AYWLAVSLKKKEMLATKYKDLAKKLSDDVQKMIKEGVATKADGLKVAVVVNTAELQLSQI 265 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 ++E +M + L G L +Q+ + P I + + RP++R Sbjct: 266 QSIEAIAKMA---LCELCGIALNSDLILKDEQAQSIAPLDNIEETTPSASAICAQRPELR 322 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKLYLPIF 335 + + S I KS P + L G ++ + N F G+ W+ G +++PI+ Sbjct: 323 LLQNTIDLSKQNTKIIKSLYLPHILLTGGYSVMNPNLFNGFQNKFTDLWNIGIVVHVPIW 382 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + G+ K IR +++ + Q+ + E+E + KK + + ++ ++ Sbjct: 383 NWGEGKYKIRATKAATSIANLELQDAIQKINLEIEQYQLRLKCAKKQLYTAKKNLQSAEE 442 Query: 396 SMSLSMINYRQGRYSLLDILDIERA--TAKVE-VDLSIAKR 433 ++ + I +++G ++ +++ + A TAK +D IA R Sbjct: 443 NLRCANIGFKEGVMTVTEVMLAQTAWQTAKTAIIDSEIAVR 483 >gi|255013599|ref|ZP_05285725.1| cation efflux system protein CzcC [Bacteroides sp. 2_1_7] Length = 419 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 33/160 (20%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 L+ RPD++ + + S A + + +S +P +S+ G T+D + N +W+ G + Sbjct: 242 LLYERPDLKLAQASVKASEADVRLQRSLAFPEVSVKG----TYDKAGNFINDYWAIGLSV 297 Query: 331 YLPIFDK--GKIK-SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 LPIF++ G I+ + I A+ + +E+Y A ++ EN L + +L+ Sbjct: 298 SLPIFNRNQGNIRAAKISVAQKAHKEEY---------ARRQAENELFT------SYARLE 342 Query: 388 HAVELHK-------KSMSLSM----INYRQGRYSLLDILD 416 A++L++ K +L + +N+++ SLL+ +D Sbjct: 343 KAIQLYRSSNYGLEKDFALIIEGVNLNFQKRNISLLEFID 382 >gi|325105171|ref|YP_004274825.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] gi|324974019|gb|ADY53003.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] Length = 443 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 32/170 (18%) Query: 297 SDLYPSLSLNGSIAL-THDNSFP---------GYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 S+ YP+LSLN + + NSF G++ + G L +PIF+ +S +R+ Sbjct: 277 SEYYPNLSLNANYNYNSQANSFDFLKSNRNAIGFDAS-AIGLTLRIPIFNGFSTRSRVRQ 335 Query: 347 AESSAQEQYITWQETV-------LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 AE +E ET NA ++ N++ +IN KK + A E++ + + Sbjct: 336 AEIEIKEFEADRLETTNALNMAYENAKIQLRNSINTINSQKK---NAELANEIYLSTQN- 391 Query: 400 SMINYRQGRYSLLDILDIERATAKVE-------VDLSIAKRQLAKSYVDL 442 NY G SL D+LD E A + + ++ IA+ QL KS D+ Sbjct: 392 ---NYNNGLASLTDLLDTENALTQAQNSYTQALLNYKIAEIQLIKSKGDI 438 >gi|161485894|ref|NP_708038.2| putative enzyme [Shigella flexneri 2a str. 301] gi|281601596|gb|ADA74580.1| Multidrug resistance outer membrane protein mdtQ precursor [Shigella flexneri 2002017] Length = 367 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 66/352 (18%), Positives = 144/352 (40%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 30 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 89 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS + +E+DI R +++ Sbjct: 90 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VDGVETDINA--SKTRQQLND 138 Query: 233 ISTLLGYPATEF--LHYMQKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + L Q +S +P + +P +L + R D++ + Sbjct: 139 VAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 198 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 199 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 258 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 259 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 313 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 314 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIRLTGALGGGY 365 >gi|24213657|ref|NP_711138.1| TolC-like outer membrane efflux protein [Leptospira interrogans serovar Lai str. 56601] gi|45658528|ref|YP_002614.1| hypothetical protein LIC12693 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194463|gb|AAN48156.1| TolC-like outer membrane efflux protein [Leptospira interrogans serovar Lai str. 56601] gi|45601771|gb|AAS71251.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 557 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%) Query: 261 IPINIGIPADLI---RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS-------IA 310 +P++ + D I +R D++ K+ + + I +++ PSL L+G+ I Sbjct: 320 VPLDFNVEKDYIYALDHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIV 379 Query: 311 LTHDNSFPGYNTHWSFG-PKLY------LPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 N G SF P+ Y P++DKG IK++IR A+ Q E L Sbjct: 380 SPQQNLTDGNRGVASFKYPEAYAAFQFSYPLWDKG-IKADIRNAKLDVQNLEKKEAELKL 438 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI---LD---- 416 + +E+EN +I DK I + E K +RQGR++ + + LD Sbjct: 439 SIKEELENRYAAIVADKDIFEGAKKRKEEANKFYKGLSERFRQGRFTAVAVKNALDNVIQ 498 Query: 417 --IERATAKVEVDLSIAKRQLAKSYV 440 ++ AK+++++ I + +LAK+++ Sbjct: 499 SELQVTQAKIQLNIDILRYELAKNHI 524 >gi|115380261|ref|ZP_01467278.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|310821807|ref|YP_003954165.1| outer membrane efflux protein domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115362730|gb|EAU61948.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|309394879|gb|ADO72338.1| Outer membrane efflux protein domain protein [Stigmatella aurantiaca DW4/3-1] Length = 473 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 50/268 (18%), Positives = 110/268 (41%), Gaps = 10/268 (3%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ A ++ +++ Q+L + + + ++F G +++L++ + K E ++ Sbjct: 167 AYLGAASLRDSLAVQEQLLAVRRGFEHDAQVRFQVGDVERIALLRATLDRKQAEQELIRS 226 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ- 281 ++ ++ LL P + Q P + +P P + D R Sbjct: 227 RNAYATARSALAALLARPVDFDVAPPQG------PEVAVPAEAANPETAEQTALDKRLDV 280 Query: 282 -EKKLADSVAKIGIAKS--DLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 +LA A++G + +P+L + + ++ G T W+ G L +FD G Sbjct: 281 GAARLAVDSARLGRRQYVFQYFPNLYATANFSASNAAGLTGQTTIWNAGLALSWTLFDGG 340 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 ++NIR A E + A EV A + + ++ + V++ ++S Sbjct: 341 LREANIREASGKIAEANANLRGAEHKARDEVRKATFDLESAEANLSTAEERVKIARESAR 400 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEV 426 L+ ++ G + L + DI + A E+ Sbjct: 401 LTKESFEAGAATYLQVTDINASLAGAEL 428 >gi|256839957|ref|ZP_05545466.1| cation efflux system protein CzcC [Parabacteroides sp. D13] gi|262381795|ref|ZP_06074933.1| cation efflux system protein CzcC [Bacteroides sp. 2_1_33B] gi|256738887|gb|EEU52212.1| cation efflux system protein CzcC [Parabacteroides sp. D13] gi|262296972|gb|EEY84902.1| cation efflux system protein CzcC [Bacteroides sp. 2_1_33B] Length = 419 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 33/160 (20%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 L+ RPD++ + + S A + + +S +P +S+ G T+D + N +W+ G + Sbjct: 242 LLYERPDLKLAQASVKASEADVRLQRSLAFPEVSVKG----TYDKAGNFINDYWAIGLSV 297 Query: 331 YLPIFDK--GKIK-SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 LPIF++ G I+ + I A+ + +E+Y A ++ EN L + +L+ Sbjct: 298 SLPIFNRNQGNIRAAKISVAQKAHKEEY---------ARRQAENELFT------SYARLE 342 Query: 388 HAVELHK-------KSMSLSM----INYRQGRYSLLDILD 416 A++L++ K +L + +N+++ SLL+ +D Sbjct: 343 KAIQLYRSSNYGLEKDFALIIEGVNLNFQKRNISLLEFID 382 >gi|167646111|ref|YP_001683774.1| TolC family type I secretion outer membrane protein [Caulobacter sp. K31] gi|167348541|gb|ABZ71276.1| type I secretion outer membrane protein, TolC family [Caulobacter sp. K31] Length = 497 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 55/304 (18%), Positives = 127/304 (41%), Gaps = 26/304 (8%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V+ +I +Y+D R +ER+ IA + + + + +E + +F G ++ + + EA + Sbjct: 146 SVLGNVIQAYVDVRRDQERLRIAQENVSVLNRQLEEARARFEVGEITRTDVAQSEARLAG 205 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY--IPINIGIPADLI 272 ++ + + + + ++G T +P+L +P ++ DL+ Sbjct: 206 GQASQSSAQAILAGSRAAYAAVVGQNPTNLAP---------EPSLAALLPASVEQAFDLV 256 Query: 273 -RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-------NSFPGYNTHW 324 ++ P I+ + A++ +AK+ + P++S + + N F Y+ Sbjct: 257 DQSNPQIQAARYAERAAAARVALAKAAMRPTVSARAGLGWESEGRVDGKGNQFGDYDRGI 316 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 + +PIF G S IR A+ ++ + A++++ A ++ + + Sbjct: 317 NGSITASVPIFTGGLTSSQIRAAKERENAAHVAVEGAKRTALQQISTAWNNLLAARANLV 376 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 + V + + + G + LD+L+ + + EV L IA+ D Y+ Sbjct: 377 SNEEQVRAARIAFEGVRQEQQVGLRTTLDVLNAQLELSNAEVALVIARH-------DEYV 429 Query: 445 AIGS 448 A S Sbjct: 430 ASAS 433 >gi|158520628|ref|YP_001528498.1| TolC family type I secretion outer membrane protein [Desulfococcus oleovorans Hxd3] gi|158509454|gb|ABW66421.1| type I secretion outer membrane protein, TolC family [Desulfococcus oleovorans Hxd3] Length = 464 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 60/305 (19%), Positives = 129/305 (42%), Gaps = 22/305 (7%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 +++ A+ + ++ +Y A ++R++ + EL + +F +G +++ Sbjct: 145 ELEAARQELAVRVAQAYFHALAARDRLTATAAEEAAVGGHYELVNERFNRGLSTRTEYYD 204 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG- 266 +A + I + T E ++ + G P E L + ++ P+ P++ Sbjct: 205 AKARLADIMARRLTAESDLDDAYQALAEITGSP-VEDLSLLHEELPLVSPD---PVDADA 260 Query: 267 -IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHW 324 I A +R P + + +A + ++ ++ YP+++L S D + G + Sbjct: 261 WIEA-AVRQNPSLEAVRQSVASARQEVRRQRAGHYPNVNLEASHNWRETDGTLFGGGSEV 319 Query: 325 SFGP---KLYLPIFDKGKIKSNIRRA--ESSAQEQYITWQETVLNAIKEVENALTSINED 379 +L +P++ G + S R A +A Q + Q L +E A ++ Sbjct: 320 ETSEILFRLNVPLYQGGMVNSRTREAICRMNALLQEESRQTRALQ--RETRAAFYGVDNA 377 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + V L+ AVE + ++ +R G +++L +LD ER DLS+A++ A + Sbjct: 378 IERVRSLRDAVEAQQLALEGKKEGHRSGLFTVLAVLDAER-------DLSLARQNYAMAR 430 Query: 440 VDLYI 444 D I Sbjct: 431 YDYII 435 >gi|195952949|ref|YP_002121239.1| outer membrane efflux protein [Hydrogenobaculum sp. Y04AAS1] gi|195932561|gb|ACG57261.1| outer membrane efflux protein [Hydrogenobaculum sp. Y04AAS1] Length = 427 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 28/220 (12%) Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 +L+L K A IKSI+ DI +++ S ++TL G + ++ +F+P Y Sbjct: 195 ELALTK--ASIKSIKDDIDSVKAS-------LNTLTGLKSIDW---------HFEPIKYK 236 Query: 262 PINIGIPADLI----RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 + G LI +NR +++ ++ + K+ ++KS P++ N T+ Sbjct: 237 EEHFGNLEQLINIALKNRYELKVAKENEYIAKRKLFLSKSSYLPNIYFN----YTYSKII 292 Query: 318 PG--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 G WS+ +PIFD GK +I + +T L+ KEV +A + Sbjct: 293 GGGAEEPQWSYNLMASMPIFDFGKRYFDILSTHKEYLNTKKDYDQTALDIRKEVVDAYSK 352 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 +N K+ + Q A+ ++ M + + Y+ G + D L Sbjct: 353 LNSAKENLRASQKALAYAEEVMKIEELKYKTGAGDMYDTL 392 >gi|15839175|ref|NP_299863.1| outer membrane export factor [Xylella fastidiosa 9a5c] gi|9107803|gb|AAF85383.1|AE004065_8 outer membrane export factor [Xylella fastidiosa 9a5c] Length = 452 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 50/253 (19%), Positives = 106/253 (41%), Gaps = 25/253 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K+ + + + G + L + A +D T + + ++ + G P T+ Sbjct: 157 KRQFDYAQKRLEVGLSPITDLHEARASYDQARADTITARNTLQDYYQALTEITGQPVTD- 215 Query: 245 LHYMQKQSNNFQPNLYIPINIG----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 ++ +F+P +P + + I N P ++ Q+ ++ + + I A+ + Y Sbjct: 216 ---LRGLPEDFRPE--VPAKFSHIDQLVTEAISNNPSLKAQQLQVNAAESSISAARGEHY 270 Query: 301 PSLSLNGSI--------------ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 P+LSL+GS+ AL D P +T+ + L +P+F G +S +R+ Sbjct: 271 PTLSLSGSLGKSKAWGTSSGAMSALIPDRDQPISDTN-NLQLTLSIPLFAGGATQSRVRQ 329 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + Q T+++ + NA ++ V + AV + ++ S + Sbjct: 330 AIAQRDIQQDTYEQNKRTLNRNTRNAYQNMIAGISEVEARRLAVVSAQAALDASQVGLEV 389 Query: 407 GRYSLLDILDIER 419 G +LLD++ +R Sbjct: 390 GTRTLLDVVQNQR 402 >gi|83749684|ref|ZP_00946664.1| Probable outer membrane cation efflux system [Ralstonia solanacearum UW551] gi|83723646|gb|EAP70844.1| Probable outer membrane cation efflux system [Ralstonia solanacearum UW551] Length = 452 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 17/172 (9%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PD+ + ++ A++ ++ +PSL+L GS+ + P G + +P+F Sbjct: 285 PDLEADRAAVREAEARLAHERAQRWPSLALRGSV-----DRQPDLQDS-RVGLVMSIPLF 338 Query: 336 DK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 D+ G+ + + RA + +++ + ++ V +A ++ E A + ++ + V K Sbjct: 339 DRREGPVGEAVAVLERARAVLRDRELQMRQAVESAYRQYEIAQSQVSALESGVVKQ---- 394 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + ++ ++ YR G +LD LD +R + DL A+ L + V+L Sbjct: 395 --AESALRVAEAAYRHGERGILDYLDAQRVFRQARNDLIAARADLRTAAVEL 444 >gi|300697094|ref|YP_003747755.1| Outer membrane protein of the copper-transporting efflux system CusCFBA [Ralstonia solanacearum CFBP2957] gi|299073818|emb|CBJ53339.1| Outer membrane protein of the copper-transporting efflux system CusCFBA [Ralstonia solanacearum CFBP2957] Length = 452 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 21/183 (11%) Query: 269 ADLIRN----RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW 324 ADL+ N PD+ + ++ A++ ++ +PSL+L GS+ + P Sbjct: 274 ADLVGNVLATHPDLEADRAAVREAEARLAHERAQRWPSLALRGSV-----DRQPDLQDS- 327 Query: 325 SFGPKLYLPIFDK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 G + +P+FD+ G+ + + R + +++ + ++ V +A ++ E A + ++ Sbjct: 328 RVGLVMSIPLFDRRDGPVGEAVAALERTRAVLRDRELQMRQAVESAYRQYEIAQSQVSAL 387 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + V K + ++ ++ YR G +LD LD +R + DL A+ L + Sbjct: 388 ESGVVKQ------AESALRVAEAAYRHGERGILDYLDAQRVFRQARNDLIAARADLRTAA 441 Query: 440 VDL 442 V+L Sbjct: 442 VEL 444 >gi|260886801|ref|ZP_05898064.1| putative outer membrane efflux protein [Selenomonas sputigena ATCC 35185] gi|330839390|ref|YP_004413970.1| outer membrane efflux protein [Selenomonas sputigena ATCC 35185] gi|260863400|gb|EEX77900.1| putative outer membrane efflux protein [Selenomonas sputigena ATCC 35185] gi|329747154|gb|AEC00511.1| outer membrane efflux protein [Selenomonas sputigena ATCC 35185] Length = 532 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 56/298 (18%), Positives = 122/298 (40%), Gaps = 23/298 (7%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 +I +Y +A K+ + + +D Y+ ++ F+ G+ +++ +++ E+ + Sbjct: 139 VIEAYYNALQAKKTVGVNKASVDNYQAHLTNVEQLFSAGSKARMDVLRASVELSDARQTL 198 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN-FQPNLYIPINIGIPADLIRNRPDI 278 E + +++ + L+ E L + F P L + G+ NR ++ Sbjct: 199 IKAENEYEISLAKLRNLVNMDRDEPLRLTDDAVYSPFAPALSDCLAFGVE-----NRKEL 253 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---------NSFPGYNTHWSFGPK 329 + I + K+ P + + S + D G N +W+ Sbjct: 254 WIDNYDVVRKELDIEVVKAGYTPQIDFSLSASANKDFEPASASSRGVTAGINMNWN---- 309 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 IFD G+ K+ I AE++ + ++ + ++ A S+ E + + Q A Sbjct: 310 ----IFDGGRKKARIEAAEAALDAARLQLEKDRNDVDYDIRAAYFSMKEAENRLNSTQDA 365 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 V+ K+ ++ YR G +LDI+D + A +K E++ A+ A+ + A+G Sbjct: 366 VDKAKEDYFIAREKYRAGEGIMLDIIDAQLALSKAEMNHISAQYDFARGKAQVENAMG 423 >gi|282856903|ref|ZP_06266159.1| putative outer membrane efflux family protein [Pyramidobacter piscolens W5455] gi|282585260|gb|EFB90572.1| putative outer membrane efflux family protein [Pyramidobacter piscolens W5455] Length = 468 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 70/409 (17%), Positives = 163/409 (39%), Gaps = 32/409 (7%) Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF------IPNLKTNSTG 118 +++A N ++ A RI A++ I RAD P YA+++ + IP + Sbjct: 43 LELACANNPSLAAAEARIEQARQQIAQARADKLPKLYATLAGAWQGEEGAIPAYQGEPGH 102 Query: 119 QLDSDWKIDLFGQRRHI--------------ESSLANLDSAYAQVDIAKLN----VISKL 160 + + ++ F + E+++A A+ + ++ V + + Sbjct: 103 SIPIGYALNSFEEAYQAALGVQWLIFSSGAAENTIAARKMAFRGIQTREVRTGQAVENAV 162 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + SY + + + ++ +A ++L L K+++ F G ++ ++++E ++ + E ++ Sbjct: 163 LVSYYNLQRARAKLGVAEEVLALSKEHLSQVRNFFKYGVVAQDEVLRVEVDVSNGELNVI 222 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHY--MQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + + + + +G TE + + + N P + A L RP++ Sbjct: 223 SAKNAVDVRWRALERAVG---TELRSKFDLPEPNRNAAPKDAPQWD---EASLYALRPEL 276 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + + ++A A+ P + G + +P W L +D G Sbjct: 277 KALDFSRRAALAVAAAAQGSSGPKIVAGGEAFAQGRDFWPDGLDTWKLSLSLRWDFYDGG 336 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 K ++ ++ ++ AQE ++ EV +A + ++ + V K+ Sbjct: 337 KARAQVKEYKARAQELLAQIEDVKRQVALEVSSAQLNFESARQRIDVASRQVASAKEDYR 396 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++++ Y+ + LD+LD A L A + S DL A+G Sbjct: 397 MALLRYKSNVGTNLDVLDARTALTNARTQLVDAVYDMNSSRADLDYALG 445 >gi|223936264|ref|ZP_03628177.1| outer membrane efflux protein [bacterium Ellin514] gi|223895126|gb|EEF61574.1| outer membrane efflux protein [bacterium Ellin514] Length = 429 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 174/402 (43%), Gaps = 47/402 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 SL IALQ++ I A R A+K+ R+ +P + A+++ N + + Sbjct: 28 SLKDAEAIALQKHPRITAAELRALASKQVTREARSAYYPTITGNATLAGGSGNNTRI-AA 86 Query: 118 GQLDSDWKIDL-------------FGQRRHIESSLANLDSAYAQVDIA-KLNVISKLIPS 163 G L++ +D FG+ ++ +S A + +A + ++ ++ + Sbjct: 87 GGLNNPLILDRNAEGINVNQLIYDFGRTANLTASSELRSRAEEENALATRAQIVLQVDAA 146 Query: 164 YIDARHFKERISIAHQIL----DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 Y DA + + +A+Q + L+ + EL++ K G + V LE E K + + Sbjct: 147 YFDALQAQSVLGVANQTVATRQTLFDQINELANNKLKSGLDVSFARVSLE-EGKLL---L 202 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN---NFQPNLYIPINIGIPADLIRNRP 276 E + +++ LLG + H + S N N + ++NRP Sbjct: 203 AKTENDLQGAFASLAALLGDRDQQQYHLLDTASPASLNMDQNQLVE-------KALQNRP 255 Query: 277 D---IRYQEKKLADSVAKIGIAKSDL-YPSLSLNGSIALT--HDNSFPGYNTHWSFGPKL 330 D +R+ EK+ A A+ A+ DL YP+++ GS + HD+ + + + G + Sbjct: 256 DLARLRF-EKEAAKKFAR---AEKDLHYPTINAMGSAGIIPLHDSKLN--DNYAAAGINV 309 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 LPIFD + + AE A+ T + N +++V+ A ++N + VT V Sbjct: 310 SLPIFDGFLFSARAKEAELRAKAVEATMLDEENNIVRDVKLAALNLNYAAERVTLTGKLV 369 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 E + L+ Y+ G S++++ + A + E+ + AK Sbjct: 370 ESANDAFDLAQARYKVGSSSIVELSQAQLAKTEAEIAQARAK 411 >gi|255693150|ref|ZP_05416825.1| outer membrane efflux protein [Bacteroides finegoldii DSM 17565] gi|260621041|gb|EEX43912.1| outer membrane efflux protein [Bacteroides finegoldii DSM 17565] Length = 426 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 23/245 (9%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY-PAT--EFLHYMQK 250 +F G S+ L+ + +K E +++ + + ++ L+G P T + L+ + K Sbjct: 175 RFNDGMISRTDLLMISTRLKEAELQYIKARQNYTLALQKLNILMGIDPNTPVDSLYTIDK 234 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 S PI I ++++ R D E + S A+ A S P LS+ S Sbjct: 235 TS--------APIQILSLENVLQRRADYESTEVNIMKSQAQRKAALSQFNPQLSMYFSGG 286 Query: 311 LTHDNSFPGYNTHWS--FGPKLYLPIFDKG-KIKSNIRRAE----SSAQEQYITWQETVL 363 GY+ ++ G L +PIF G + K+N ++ Q+ Y+T Sbjct: 287 WATGTPNLGYDVSFNPIVGINLNIPIFRWGARFKTNRQQKAFIGIQKLQQSYVT-----D 341 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 N +E+ ALT + E + V + L +++ L +Y +G+ +++D+L + + + Sbjct: 342 NINEELSAALTKLTETEYQVKTATKTMNLANENLDLVSFSYNEGKANMVDVLSAQLSWTQ 401 Query: 424 VEVDL 428 +L Sbjct: 402 AHTNL 406 >gi|332093247|gb|EGI98307.1| outer membrane efflux family protein [Shigella boydii 5216-82] Length = 362 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 13/188 (6%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 178 LLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVT 237 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Q Sbjct: 238 AGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQ 294 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDL 442 H ++ + +L ++ Q R++ I + A++ + + + Q + + L Sbjct: 295 HQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQL 352 Query: 443 YIAIGSGY 450 A+G GY Sbjct: 353 TGALGGGY 360 >gi|322434333|ref|YP_004216545.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX9] gi|321162060|gb|ADW67765.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX9] Length = 439 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 77/375 (20%), Positives = 152/375 (40%), Gaps = 36/375 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L ++V+ A +N T+L A + A + + + P+ + + +PN + Sbjct: 53 TLQQVVEQARARNPTLLAAEANLRAVRAQEIQAGVRVNPTLGVNGTTVTLPNDGSEGNPP 112 Query: 120 LDSDWKIDLF--GQRRH--IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 + LF G +R +E + A AQ++ I ++ ++ KE + Sbjct: 113 SYAVQVTRLFERGNKREYRLEDARATTVQTAAQLEDTARQTILQVKQAFTKMLIAKEALE 172 Query: 176 IAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIST 235 +++ L Y+ +E+++ ++ G KL +L+ ++ S ESD E + + + + T Sbjct: 173 LSNANLADYRHEVEIANDRYKAGDIGKLDFERLDLQLGSFESDQANAEITLLQSSYQLQT 232 Query: 236 LLGYPATEFLHYMQKQSNNFQ--PNLYIPINIGIPADLIR----NRPD--IRYQEKKLAD 287 LLG Q S +F ++ PI A+L + RPD A+ Sbjct: 233 LLG---------SQTSSPDFDVTGDIIPPILTQTQAELTQAALTRRPDYAAARAGIVAAE 283 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI--FDKGKIKSNIR 345 + A++ IA NG+ T + + ++ SFG + +P+ FD+ + N Sbjct: 284 ANARLAIA----------NGTTDPTLEGEYDRSGSYNSFGFNVNIPLRFFDRN--QGNKE 331 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL-QHAVELHKKSMSLSMINY 404 A A+ T +V+ A K + + QH ++ + ++ Y Sbjct: 332 TARLQAESTRFTSIAARNQVTSDVDQAWVGYTRAKALSDRFGQHYLDESIDVLGIARFAY 391 Query: 405 RQGRYSLLDILDIER 419 G +L+D LD R Sbjct: 392 DHGGLALIDYLDALR 406 >gi|21673215|ref|NP_661280.1| FusA/NodT family protein [Chlorobium tepidum TLS] gi|21646298|gb|AAM71622.1| FusA/NodT family protein [Chlorobium tepidum TLS] Length = 436 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 78/424 (18%), Positives = 163/424 (38%), Gaps = 59/424 (13%) Query: 1 MNILRAIFSLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 + I+R + F+++ C V P P+L ++TL W + + Sbjct: 10 IRIMRRLRRTFVIVAVLCFV----CLPKAPVLA-------------VETLDWAQCLAE-- 50 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 A + + A E + ++E SV+ + PS AS + G Sbjct: 51 -------AAGHHPDLRSAAESVRQSEEQRNSVKGGMLPSVSASAGGERSGSSAAAPVGAW 103 Query: 121 D-----SDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK--LIPSYIDARHFKER 173 S D ++S+ L ++ + + +K++V ++ L +++ +++ Sbjct: 104 SYGVNASQLLYDGAKTSSEVKSATETLKAS--KYNESKVSVATRYALRTAFVQLLTAQKQ 161 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++A +I K+ + L L + G + SL K +A++ E ++ ++ + + Sbjct: 162 VALAEEIATKRKQELRLVALLYKSGTENIGSLSKAQADLGEAEFEVAQARRALDLAQMVL 221 Query: 234 STLLGY----PATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ST LG P + + P+ + RN P Y E S Sbjct: 222 STQLGRRSFTPIRVTGQFTASEQTRTPPDF---------DSIARNNPA--YLELTAQKSA 270 Query: 290 AKIGI--AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 A + A+S PS+ L+ + P T W G + +PI+ G K+ + +A Sbjct: 271 AGYSLQAARSAFMPSVYLSTGFGNSAFRQLPPDRTDWQAGIDVSVPIYAGGSGKAGVAKA 330 Query: 348 ES-----SAQEQ--YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 + SA E+ Y++ + ++ A K +A +++ KK + + S Sbjct: 331 RAVVNQLSADEESLYLSLKRSLAQAWKTFIDASGNVDVQKKYLDAASERARIADAQYSAG 390 Query: 401 MINY 404 +I++ Sbjct: 391 LISF 394 >gi|169822940|gb|AAG57270.2|AE005445_7 putative outer membrane protein [Escherichia coli O157:H7 str. EDL933] Length = 398 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 64/352 (18%), Positives = 144/352 (40%), Gaps = 31/352 (8%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 61 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 120 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R ++ Sbjct: 121 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQXND 169 Query: 233 ISTLLGYPATEFLHYM--QKQSNNFQPNLYIPINIGIPADL----IRNRPDIRYQEKKLA 286 ++ + + Q +S +P + +P +L + R D++ + Sbjct: 170 VAGKMKIIEARLIALTNHQTKSLTLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVE 229 Query: 287 DSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 S++ I AK+ YP ++L + AL + F L LPIFD G++ +N Sbjct: 230 SSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNAN 289 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 + A++ + ++ + V+ A+ +V A + + + + K QH ++ + +L ++ Sbjct: 290 LDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIERD--ALRVVG 344 Query: 404 YRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 Q R++ I + A++ + + + Q + + J A+G GY Sbjct: 345 LAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQJTGALGGGY 396 >gi|160884397|ref|ZP_02065400.1| hypothetical protein BACOVA_02381 [Bacteroides ovatus ATCC 8483] gi|237718185|ref|ZP_04548666.1| cation efflux system protein czcC [Bacteroides sp. 2_2_4] gi|260174605|ref|ZP_05761017.1| cation efflux system protein czcC [Bacteroides sp. D2] gi|293371076|ref|ZP_06617616.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] gi|315922869|ref|ZP_07919109.1| cation efflux system protein czcC [Bacteroides sp. D2] gi|156110136|gb|EDO11881.1| hypothetical protein BACOVA_02381 [Bacteroides ovatus ATCC 8483] gi|229452606|gb|EEO58397.1| cation efflux system protein czcC [Bacteroides sp. 2_2_4] gi|292633845|gb|EFF52394.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] gi|313696744|gb|EFS33579.1| cation efflux system protein czcC [Bacteroides sp. D2] Length = 421 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 ++ RPD++ ++ S A + + KS +P S+NGS +D + N +++ G L Sbjct: 244 MVNERPDLKIARSTVSASRANLKLQKSMAFPEFSVNGS----YDRAGNFINNYFAIGVSL 299 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIF++ + N++ A S Q+ + A E+ A S+ DK + + Sbjct: 300 SVPIFNRN--QGNVKAARFSIQQAGAEQENAANRADMELYTAYASL--DKAVQLYQSTNM 355 Query: 391 ELHK---KSMSLSMINYRQGRYSLLDILD 416 EL + K ++ N+++ SLL+ +D Sbjct: 356 ELERNFEKLIAGVNENFKKRNISLLEFID 384 >gi|207739014|ref|YP_002257407.1| outer membrane cation efflux system protein [Ralstonia solanacearum IPO1609] gi|206592385|emb|CAQ59291.1| outer membrane cation efflux system protein [Ralstonia solanacearum IPO1609] Length = 435 Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 17/172 (9%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PD+ + ++ A++ ++ +PSL+L GS+ + P G + +P+F Sbjct: 268 PDLEADRAAVREAEARLAHERAQRWPSLALRGSV-----DRQPDLQDS-RVGLVMSIPLF 321 Query: 336 DK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 D+ G+ + + RA + +++ + ++ V +A ++ E A + ++ + V K Sbjct: 322 DRREGPVGEAVAVLERARAVLRDRELQMRQAVESAYRQYEIAQSQVSALESGVVKQ---- 377 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + ++ ++ YR G +LD LD +R + DL A+ L + V+L Sbjct: 378 --AESALRVAEAAYRHGERGILDYLDAQRVFRQARNDLIAARADLRTAAVEL 427 >gi|298375642|ref|ZP_06985599.1| cation efflux system protein CzcC [Bacteroides sp. 3_1_19] gi|298268142|gb|EFI09798.1| cation efflux system protein CzcC [Bacteroides sp. 3_1_19] Length = 419 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 33/160 (20%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 L+ RPD++ + + S A + + +S +P +S+ G T+D + N +W+ G + Sbjct: 242 LLYERPDLKLAQASVKASEADVRLQRSLAFPEVSVKG----TYDKAGNFINDYWAIGLSV 297 Query: 331 YLPIFDK--GKIK-SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 LPIF++ G I+ + I A+ + +E+Y A ++ EN L + +L+ Sbjct: 298 SLPIFNRNQGNIRAAKISVAQKAHKEEY---------ARRQAENELFT------SYARLE 342 Query: 388 HAVELHKKS-----MSLSMI------NYRQGRYSLLDILD 416 A++L++ S ++I N+++ SLL+ +D Sbjct: 343 KAIQLYRSSNYGLEKDFALIIKGVNSNFQKRNISLLEFID 382 >gi|126666741|ref|ZP_01737718.1| Outer membrane protein [Marinobacter sp. ELB17] gi|126628786|gb|EAZ99406.1| Outer membrane protein [Marinobacter sp. ELB17] Length = 461 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 60/314 (19%), Positives = 126/314 (40%), Gaps = 46/314 (14%) Query: 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSH 192 RH S L + D+A A ++A+ +I + +Y + + +S A ++ + + Sbjct: 103 RHDVSKL-DTDAARADYNLAQQQLILDVATAYFNVLRANDALSTARATEAAIQRQYKQAQ 161 Query: 193 LKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQS 252 +F G + ++ + A +S E + ++ L G AT + Q+ Sbjct: 162 ERFDVGLIAITAVFEARASFDDSKSLRIAAENDLNVAKERLARLTGEYATSVENLRQE-- 219 Query: 253 NNFQPNLYIPINIGIPAD-------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 P++ P D ++ I+ +LA + A++ +AK+ YP+L L Sbjct: 220 --------FPLSRPTPMDPSVWEETALQQNWSIQSASHELAATEAQLKVAKAGHYPTLDL 271 Query: 306 NGSIALTHDNS-------FPGYNTHW-------SFGPKLYLPIFDKGKIKSNIRRAESSA 351 S H NS F G T S +L +P++ G ++ +R+ Sbjct: 272 TAS----HVNSDLRGLGGFSGVQTQGGGTTTINSISLELNIPLYSGGGTQAGVRQ----- 322 Query: 352 QEQYITWQETVLNAIK-----EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 Q + E LN + + + ++N + + + L+ + + ++ + Y Sbjct: 323 QRALVRVSEQQLNTTQRDVRVDTRSLFLTVNNNIESASALERTIISRRSALEATRAGYEV 382 Query: 407 GRYSLLDILDIERA 420 G +++++LD ERA Sbjct: 383 GTRNIVEVLDAERA 396 >gi|301024372|ref|ZP_07188061.1| outer membrane efflux protein [Escherichia coli MS 196-1] gi|299880469|gb|EFI88680.1| outer membrane efflux protein [Escherichia coli MS 196-1] gi|315615376|gb|EFU96008.1| outer membrane efflux family protein [Escherichia coli 3431] Length = 296 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 13/188 (6%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 112 LLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVT 171 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Q Sbjct: 172 AGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQ 228 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDL 442 H ++ + +L ++ Q R++ I + A++ + + + Q + + L Sbjct: 229 HQAQIERD--ALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQL 286 Query: 443 YIAIGSGY 450 A+G GY Sbjct: 287 TGALGGGY 294 >gi|255015961|ref|ZP_05288087.1| outer membrane efflux protein [Bacteroides sp. 2_1_7] Length = 453 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 18/265 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K+ QG ++ L++ + +K+ E ++ E S + + LLG + Q Sbjct: 193 KYEQGTVAEYDLIRADVTVKNTEPNLLQAENSLTLAKWQLKALLGMDLDLNID-CDGQLT 251 Query: 254 NFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 +F+ +L Y+ + + + + D++ ++ K + + K D P+LSL G Sbjct: 252 DFKSSLFADYLSTDTTLSENTDLKQLDLQAEQLK-----KTLVMQKFDYLPTLSLTGLYQ 306 Query: 310 --ALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 A+ +D F Y N + G L +PIF G +++ + S + + +T N Sbjct: 307 WSAMNNDFKFKNYRWNPYSMIGITLSVPIFSGGSKFYKVKQTKVSIDQLNLQRDDTKRNL 366 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK 423 V+ + ++N K Q VE ++ +S Y G + L++ D E A A+ Sbjct: 367 QLAVKQYIDNMNTCIKKFDAAQKGVEQAERGYMISQKRYDTGAGTWLEMNDAELALTQAR 426 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 + + SI +AK+ DL +G+ Sbjct: 427 LNFNQSIYDYMVAKA--DLEKVLGN 449 >gi|209542422|ref|YP_002274651.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530099|gb|ACI50036.1| outer membrane efflux protein [Gluconacetobacter diazotrophicus PAl 5] Length = 521 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 15/187 (8%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNS---------FPGYNTHW 324 PD R D+ +GIA+S P L+ G HD+ G +T Sbjct: 99 PDTRRAWNTARDAALAVGIARSTYLPHLTATVVGGYNHAHDSGANAAIGNVDIGGTSTRV 158 Query: 325 SFGPKLYLPI----FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 G L + FD GK ++ I A S I + I V A + Sbjct: 159 GNGEVQTLGLEWLLFDFGKREATIDAARQSQLATNILFTGAHQKLIYAVTLAFYTHAAAT 218 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 VT L A++ +K + + R+G+ +++D +ATA+ E+ L A+ +Y+ Sbjct: 219 ARVTLLHQALDNARKVEDAADMRLRRGQGTVVDATQARQATAQAELRLVQAEGGAENTYL 278 Query: 441 DLYIAIG 447 DL AIG Sbjct: 279 DLMTAIG 285 >gi|162147800|ref|YP_001602261.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786377|emb|CAP55959.1| putative outer membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 508 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 15/187 (8%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLN--GSIALTHDNS---------FPGYNTHW 324 PD R D+ +GIA+S P L+ G HD+ G +T Sbjct: 86 PDTRRAWNTARDAALAVGIARSTYLPHLTATVVGGYNHAHDSGANAAIGNVDIGGTSTRV 145 Query: 325 SFGPKLYLPI----FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 G L + FD GK ++ I A S I + I V A + Sbjct: 146 GNGEVQTLGLEWLLFDFGKREATIDAARQSQLATNILFTGAHQKLIYAVTLAFYTHAAAT 205 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 VT L A++ +K + + R+G+ +++D +ATA+ E+ L A+ +Y+ Sbjct: 206 ARVTLLHQALDNARKVEDAADMRLRRGQGTVVDATQARQATAQAELRLVQAEGGAENTYL 265 Query: 441 DLYIAIG 447 DL AIG Sbjct: 266 DLMTAIG 272 >gi|320184851|gb|EFW59641.1| RND efflux system, outer membrane lipoprotein, NodT family [Shigella flexneri CDC 796-83] gi|332097476|gb|EGJ02456.1| outer membrane efflux family protein [Shigella boydii 3594-74] Length = 274 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 13/188 (6%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFG 327 L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 90 LLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVT 149 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L LPIFD G++ +N+ A++ + ++ + V+ A+ +V A + + + + K Q Sbjct: 150 AGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQ 206 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDL 442 H ++ + +L ++ Q R++ I + A++ + + + Q + + L Sbjct: 207 HQAQIERD--TLRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQL 264 Query: 443 YIAIGSGY 450 A+G GY Sbjct: 265 TGALGGGY 272 >gi|197122796|ref|YP_002134747.1| outer membrane efflux protein [Anaeromyxobacter sp. K] gi|196172645|gb|ACG73618.1| outer membrane efflux protein [Anaeromyxobacter sp. K] Length = 454 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 47/251 (18%), Positives = 96/251 (38%), Gaps = 16/251 (6%) Query: 180 ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY 239 + L++++ + ++ G ++++L++ + + E D+ + ++ LLG Sbjct: 191 VASLHERD---AQVQVQAGTAARIALLRAQIDRARAEEDLVRARNALAGAKSTLAALLGR 247 Query: 240 -PATEFLHYMQKQS---NNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIA 295 AT+F + P + + +R RP++R + + A Sbjct: 248 GEATDFPLAPPPAPELPGDLSP---------LEDEAVRLRPELRAAGAAVEAATASRRAE 298 Query: 296 KSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 + P+L G + F G W+ G L +FD G ++ R A + E Sbjct: 299 TARYLPTLGAFGQARWSSVAGFTGKEESWAAGLSLQWELFDGGAREAGRREAGARLVEAE 358 Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 L A EV A + + K + V L +++ L + +R G+ + L+ Sbjct: 359 AARASLALQARDEVRRARLDLASARANRAKAEEQVALARENQRLVEVAFRAGQATSLEAT 418 Query: 416 DIERATAKVEV 426 D A A E+ Sbjct: 419 DANVALATAEL 429 >gi|40063605|gb|AAR38394.1| type I secretion outer membrane protein, TolC family [uncultured marine bacterium 582] Length = 472 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 25/273 (9%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 V+ + + ++ + R E++++ L L + + + +F G ++ + EA + Sbjct: 142 VLIRAVEAFTNVRRDTEKVALRRSNLSLITEELRAAKDRFDVGEVTRTDVALAEARLAGS 201 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPI-NI-GIPADLIR 273 S + E + R++V +G+ N + P+ N+ A +R Sbjct: 202 RSALAAAEGTLRVSVEEYRAAIGHAPKAL---------NGSDKVLKPVKNLDAAKAIAVR 252 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLY--PSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 PDI+ E + + +VA++ + ++ L P + L+GS LT + Y + Sbjct: 253 QHPDIK--ELQHSVTVAELTLQQAQLAKKPIVKLSGSYGLTETLTSRAYGRSGEIKLQAT 310 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLN-AIKEVENALTSINEDKKIVTKLQHAV 390 I+ G+I + +R +S+A+ + LN A VE + + ++ T + A Sbjct: 311 GSIYQGGQIPAFVR--QSAARRDAARYG---LNLAALAVEQNVATAYARLQVATAEKEAS 365 Query: 391 ELHKKSMSLSMINYRQ----GRYSLLDILDIER 419 EL ++ ++ + R+ G + LD+L+ E+ Sbjct: 366 ELQIRAARVAFLGVREEAALGARTTLDVLNAEQ 398 >gi|320105445|ref|YP_004181035.1| outer membrane efflux protein [Terriglobus saanensis SP1PR4] gi|319923966|gb|ADV81041.1| outer membrane efflux protein [Terriglobus saanensis SP1PR4] Length = 429 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 24/202 (11%) Query: 142 LDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATS 201 LD Q+D++ S+++ ++ + IA + L Y+K + L ++ GA Sbjct: 136 LDDQRRQIDLSIRQAFSRML-------FAQKALGIARENLADYQKTVALMKVRLDAGAMD 188 Query: 202 KLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY--PATEFLHYMQKQSNNFQPNL 259 + ++E ++ ESD+ + + R + TL+G P +F + P Sbjct: 189 QTDFDRVELQLAGFESDLDNAQLALRQGSIALQTLMGVATPNEQF-----DIAGTLDPPT 243 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 + +D + NRPD++ + ++A S A + A + NG+ T + + Sbjct: 244 VTTTIDQLRSDALANRPDLKASQAQVAVSNAGVKQAIA--------NGTADPTVEGEYER 295 Query: 320 YNTHWSFGPKLYLP--IFDKGK 339 + G L P IFD+ + Sbjct: 296 AGRANTVGASLNFPLRIFDRNQ 317 >gi|292491730|ref|YP_003527169.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] gi|291580325|gb|ADE14782.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] Length = 465 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 82/382 (21%), Positives = 151/382 (39%), Gaps = 39/382 (10%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLK 113 E D L K+ +AL QN + ++ I A + +L +A L P+ +I + N + Sbjct: 68 EPSGDIKLQKVAALALLQNPQLAAFSQEIRAREAAVL--QAGLLPNPQLNIQGSNLGNSR 125 Query: 114 TNS------TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYI 165 S T QL ++ L G + A L A D +++V++++ S++ Sbjct: 126 LKSFDGPSTTVQLS---QLILLGGKIEKRVKTAQLTQELAGWDYEAKRVDVLTQVTQSFV 182 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E++++A Q++ L ++ + G TS + K + + S+ ++ E+ Sbjct: 183 AVLSAQEKLALAQQLVRLAEQVATTVSKRVQAGRTSPVEETKAQVALSSVRIELTRAERD 242 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 ++ G F QK IP ++ A LI PD+ ++ Sbjct: 243 LEAARKQLAATWGSITPGF----QKAVGQLSEVSPIP-SLEQLAQLINQNPDLARWATEI 297 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG--YNTHWSF----GPKLYLPIFDKGK 339 A A I + KS P L++ SF G Y + G + L +FD+ Sbjct: 298 AQRQALIDLEKSKAIPDLTV----------SFGGTEYADTGDYTLVAGISIPLMLFDRN- 346 Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 + NI AE + + T + + NA + T L+ V L + Sbjct: 347 -QGNILAAERQLTKAAENRRATQVRVATALNNAYQRLATAHAEATALKTQV-LPGAQSAF 404 Query: 400 SMIN--YRQGRYSLLDILDIER 419 +N +R G++ L +LD +R Sbjct: 405 DAVNKGFRLGKFDFLSVLDAQR 426 >gi|260642660|ref|ZP_05416792.2| putative outer membrane efflux protein [Bacteroides finegoldii DSM 17565] gi|260621159|gb|EEX44030.1| putative outer membrane efflux protein [Bacteroides finegoldii DSM 17565] Length = 445 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 70/314 (22%), Positives = 139/314 (44%), Gaps = 30/314 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 32 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 91 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ AK ++ + +Y Sbjct: 92 SYSDINSANTSFSLGTNVPI-FTGLQLPNQYSLAKLDLKAAIEDLNKAKEDIAINVTSAY 150 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E +AH +DL K ++ G S + + +A + E + Sbjct: 151 LQVLFNQELSKVAHNQVDLSKDQLKRIQGLHGVGKASSSEVAEAQARVAQDEMTAVQSDN 210 Query: 225 SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ E Sbjct: 211 TYKLSLLDLTQLLELPTPEGFVLEGPKEELEFE-SLTPPDDIYTQA--LAYKPSIKAAEY 267 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLYLP 333 +L S+ I IA+S YP LS + + + +NSF N + G L +P Sbjct: 268 RLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSENSFGSQIKNNLNKYVGFNLSVP 327 Query: 334 IFDKGKIKSNIRRA 347 IF++ ++ +R A Sbjct: 328 IFNRFSTRNRVRTA 341 >gi|194333086|ref|YP_002014946.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] gi|194310904|gb|ACF45299.1| outer membrane efflux protein [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 2/160 (1%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYL 332 R D++ E + + +AK+ P L+ G +DNSFPG + H W+ G L Sbjct: 270 GRADLKALEAATEAAGYQYQMAKASSLPRLNAFGQTNW-NDNSFPGLDEHNWTVGMTLSW 328 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 +FD + A+++ E ++E + EV A S++ + + + A+E Sbjct: 329 TVFDGYGAIGKAQEAKAAELESRYRYEEGRDRSRYEVRQASRSLSTARSRIAIARQALEE 388 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 K S+ YR G ++L E A ++ L+ A+ Sbjct: 389 AKVSLDYIGERYRSGMAMTFELLGRESAYTYAQMRLNKAR 428 >gi|325276720|ref|ZP_08142439.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324098144|gb|EGB96271.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 75 Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 4 LRAIFSLFIVLLAGCTVGPEYTKPH----MPLLPTQFSIGNSKNLINIDTLKWWESFNDT 59 LR L L+AGCT+GP++ +P P Q S+ L+WWESF+D Sbjct: 5 LRVSPLLLAALMAGCTMGPDFLRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWESFHDA 64 Query: 60 SLNKLVK 66 L+ L++ Sbjct: 65 QLSALIQ 71 >gi|160873648|ref|YP_001552964.1| outer membrane efflux protein [Shewanella baltica OS195] gi|160859170|gb|ABX47704.1| outer membrane efflux protein [Shewanella baltica OS195] Length = 489 Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 1/177 (0%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL 330 + P ++ E K A + + + + YP++ L G+ L D+S F W G + Sbjct: 291 LSQHPALKLLEAKEAQANGLVSLEQGKYYPTVFLFGNYTLYEDDSLFSQVEPDWMVGVGV 350 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PI + + A+S+ + T +T + ++ + + + ++ VT L ++ Sbjct: 351 KVPILSRDGRSGKVEAAKSALLQARYTKAQTRQDLSLLLDQSYRQLLQAEEEVTALDTSL 410 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 EL +++ L I + QG + +D +D E + V+ A+ + ++Y L G Sbjct: 411 ELATENLRLREIAFNQGLSTSIDRVDAELKLSAVKTQQLAARYRYVQAYARLMAISG 467 >gi|91978113|ref|YP_570772.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] gi|91684569|gb|ABE40871.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] Length = 424 Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust. Identities = 70/358 (19%), Positives = 145/358 (40%), Gaps = 26/358 (7%) Query: 100 SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVIS 158 S+ S S+R + +T L +LFG+R I + A +++A Q +L V++ Sbjct: 79 SFGSRSYRGTRSAETT----LQISQLFELFGKRDARIAAGQAGVETATIQRKAIRLEVLA 134 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + ++++ + RI I + + + L + GA+S + E +++D Sbjct: 135 ETAGAFLNVLGAQRRIQILDEQIAEIDRITPLLQRRVDAGASSLAETGRAEVASALVKAD 194 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 + + ++ L+G A +F + +P + + I A+ P + Sbjct: 195 RERVRSLLATSRRELAVLMGDTAPKFTAVSGRLDATGRPPSFNAVIAAIDAN-----PQL 249 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK- 337 A A++ IA+ YP + +N +D + G + +P+FD+ Sbjct: 250 MRWTAVYAQRNAELLIARLRPYPDVRVNAGWRHFNDTG----DDAVRLGVTVAIPVFDQN 305 Query: 338 -GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G I S + E+ ++ A + + S+ E + + A+ +++ Sbjct: 306 QGNILSAQESLAKTRAEREANRNSLIVLAGRAYDTLQGSLRE---LAILRETAIPKSRQA 362 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY--NP 452 Y QGR+SLL++LD + + A+ + + Q A+ + +AI G NP Sbjct: 363 SDAIFEGYGQGRFSLLEVLDAQASVAQARL-----REQEAQQNFHVAVAIIEGLVGNP 415 >gi|281355874|ref|ZP_06242368.1| outer membrane efflux protein [Victivallis vadensis ATCC BAA-548] gi|281318754|gb|EFB02774.1| outer membrane efflux protein [Victivallis vadensis ATCC BAA-548] Length = 607 Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 46/299 (15%) Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 E IA + D + +++ + LK+ GA ++ E ++ + ES++ + + V+ Sbjct: 184 ENKRIALEDRDFQQSSLQYTQLKYQAGAVPLSDVLNFEIQMNAAESNLVQADYQYETAVY 243 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRPDIR-YQEKKLADSV 289 ++ L+GYP + K +++F+ N ++ I D + NRPD++ Y+E Sbjct: 244 ALAVLMGYPDGTLPQEI-KFASDFKTNFSDLPSVDIYLDTALANRPDLKGYRE------- 295 Query: 290 AKIGIAKSDLY-------PSLSLNGSIAL-THDNSFPGYNTH----------------WS 325 ++ IAK +Y P+++ ++A+ T +N++ G +++ S Sbjct: 296 -QLEIAKYQMYQTYSAYGPTINAFATLAVGTQNNTYVGSDSYERSSGYYRHSRSTTPALS 354 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV--LNAIKEVENALTSINEDKKIV 383 +G IF+ G I+ N R E A +Q + + ++EV A + + K Sbjct: 355 YGFTADWTIFN-GLIRYNKMR-EYQANVAVADYQVSAMWMTVVEEVRTAYANYIQSVKQT 412 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + +L + L YR G L + + +R DL A+ LA SY+++ Sbjct: 413 RIYEKTRDLSAQQRDLVDEGYRAGNTELTRLNEAQR-------DLVEAETNLASSYINI 464 >gi|217971736|ref|YP_002356487.1| outer membrane efflux protein [Shewanella baltica OS223] gi|304411561|ref|ZP_07393174.1| outer membrane efflux protein [Shewanella baltica OS183] gi|307306663|ref|ZP_07586405.1| outer membrane efflux protein [Shewanella baltica BA175] gi|217496871|gb|ACK45064.1| outer membrane efflux protein [Shewanella baltica OS223] gi|304350088|gb|EFM14493.1| outer membrane efflux protein [Shewanella baltica OS183] gi|306910631|gb|EFN41060.1| outer membrane efflux protein [Shewanella baltica BA175] gi|315265877|gb|ADT92730.1| outer membrane efflux protein [Shewanella baltica OS678] Length = 473 Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 1/177 (0%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL 330 + P ++ E K A + + + + YP++ L G+ L D+S F W G + Sbjct: 275 LSQHPALKLLEAKEAQANGLVSLEQGKYYPTVFLFGNYTLYEDDSLFSQVEPDWMVGVGV 334 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PI + + A+S+ + T +T + ++ + + + ++ VT L ++ Sbjct: 335 KVPILSRDGRSGKVEAAKSALLQARYTKAQTRQDLSLLLDQSYRQLLQAEEEVTALDTSL 394 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 EL +++ L I + QG + +D +D E + V+ A+ + ++Y L G Sbjct: 395 ELATENLRLREIAFNQGLSTSIDRVDAELKLSAVKTQQLAARYRYVQAYARLMAISG 451 >gi|86131588|ref|ZP_01050186.1| outer membrane efflux protein [Dokdonia donghaensis MED134] gi|85818033|gb|EAQ39201.1| outer membrane efflux protein [Dokdonia donghaensis MED134] Length = 445 Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust. Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 24/280 (8%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 NV+ +L Y + +E +++ LD+ K + +F G +KL ++ + +I + Sbjct: 145 NVMLQLFSVYYEVARIEENLAVLETALDISKAREVRAQYQFDYGQVNKLEVLNAQVDIVT 204 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPADLIR 273 ++I T + R +++ +L + +S + P+ + ++ I Sbjct: 205 DSTNILTTRQQLRNAQRDLNVVLARELEDL------KSADTTVTFINPLEVERFISEGIT 258 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-------THWSF 326 N I E+ + S +I AKS L P++ L GS T N FP N T + Sbjct: 259 NNVSILQAEQNITISDYQIKQAKSLLLPTIGLTGSYGWTEGN-FPATNFLASSTSTGFQT 317 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L +FD G ++ A+ + Q T ++ + ++ NA KI Sbjct: 318 SATLQWNLFDGGSSIIGVKNAKIFLENQKYTQEQLRQQVLGDIANAKGDYLNALKI---- 373 Query: 387 QHAVELHKKSMSLSMINY--RQGRYSLLDILDIERATAKV 424 EL ++++S S N+ + R+ L + +E A++ Sbjct: 374 ---YELQEQNVSTSQANFDRSEERFKLGQVSSVEFRQAQL 410 >gi|153808470|ref|ZP_01961138.1| hypothetical protein BACCAC_02764 [Bacteroides caccae ATCC 43185] gi|149128792|gb|EDM20009.1| hypothetical protein BACCAC_02764 [Bacteroides caccae ATCC 43185] Length = 426 Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust. Identities = 74/358 (20%), Positives = 144/358 (40%), Gaps = 43/358 (12%) Query: 104 ISHR-FIPNLKTNSTGQLD-SD---WKIDLFGQRRH-------IESSLANLDSAYAQVDI 151 I+H F+P + N+ G L+ SD W L R H + L + AQ I Sbjct: 59 IAHTGFLPKIDVNADGTLNMSDLKAWNEPLGEYRNHTYQGVFVVSQPLYTGGTLNAQHKI 118 Query: 152 AK----LNVISKLI----------PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 AK LN +++ + Y +A + + A + + K+ + +F Sbjct: 119 AKADEKLNQLNEELTLDQIHYQSDAVYWNASASQAMLQSADKYQSIVKQQYNIIQDRFND 178 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G S+ L+ + +K E +++ + + ++ L+G + + F Sbjct: 179 GMISRTDLLMISTRLKEAELQYIKARQNYTLALQKLNILMGMEPNAPVDSLSSIDTAF-- 236 Query: 258 NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 P+ I ++++ R D + + S A+ A S P L++ S Sbjct: 237 ---TPVQILSLENVLQRRADYESTQVNIMKSQAQRKAALSQFNPQLNMYFSGGWATGTPN 293 Query: 318 PGYNTHWS--FGPKLYLPIFDKG-KIKSNIRRAE----SSAQEQYITWQETVLNAIKEVE 370 GY+ ++ G L +PIF G + K+N ++ Q+ YIT N +E+ Sbjct: 294 LGYDVSFNPIVGINLNIPIFHWGARFKTNRQQKAYIGIQKLQQSYIT-----DNINEELS 348 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 ALT + E + V + L +++ L +Y +G+ S++D+L + + + +L Sbjct: 349 GALTKLTETEYQVKTATENMNLANENLDLVTFSYNEGKASMVDVLSAQLSWTQAHTNL 406 >gi|225874077|ref|YP_002755536.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] gi|225791998|gb|ACO32088.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] Length = 677 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 68/319 (21%), Positives = 137/319 (42%), Gaps = 47/319 (14%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y D + + + A + LD +K ++L A ++ ++K E+++ + E D+ Sbjct: 349 AYEDEQVKENALQFAQKTLDDDRKQLKLQ-------AIPEMQVLKDESDVAAREGDLTVA 401 Query: 223 EKSFRMN---VHNIST-------LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 + R+N + N T L+ P ++ S+ PN PI+ I + Sbjct: 402 RANLRLNELLIKNALTKTISDPKLVEMPVVPLT--LETPSD---PNADRPIDALI-KEAE 455 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW-------- 324 +NRPD+ + + + + +++L PSLSL G A + P N Sbjct: 456 KNRPDVTMDQLAMEIAQRSLKSIRNELLPSLSLYGEYAGVGNAGQPNPNCAGCETVPLPN 515 Query: 325 SFGPKLY------LPIFDKG-----KIKSNIRRAES-----SAQEQYITWQETVLNAIKE 368 S+G L P + G +++ I +A+ +++ + ++E + + + Sbjct: 516 SYGGSLQNAFNYSSPEYQAGFQLNITLRNRIAKADQFRAVLEYRQRQLAFEEQKKSILFD 575 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 V N+ ++ + + VT Q A +L +K+ +++ + G S D L + A A + L Sbjct: 576 VRNSQYALRQAEARVTAAQQARDLAQKTFAITEQEQKLGAKSSYDTLAAQDALAVAQSAL 635 Query: 429 SIAKRQLAKSYVDLYIAIG 447 A+ AK+ VD+ A G Sbjct: 636 YDAQAAYAKAQVDIDRATG 654 >gi|222148983|ref|YP_002549940.1| Outer membrane secretion protein [Agrobacterium vitis S4] gi|221735969|gb|ACM36932.1| Outer membrane secretion protein [Agrobacterium vitis S4] Length = 472 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 59/328 (17%), Positives = 133/328 (40%), Gaps = 12/328 (3%) Query: 126 IDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 D F ++ SS A + S + ++ ++ +Y D ++ +SI Q L+ K Sbjct: 117 FDGFQTLNNVRSSEAGVLSNRESMKADEIQILLGAAQAYADVARDQQIVSIRRQNLNFLK 176 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + ++ ++ + G +K + + EA++ +S + + R + + ++G + Sbjct: 177 EQLKAANARLEVGEGTKTDVSQAEAQLAGADSLLASAIAQLRQSEASYMQVVGEMPKDVR 236 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + + + NL + +G IR P + + + ++ A+ L P +S+ Sbjct: 237 QPV-RATKAMPTNLDKAVALG-----IREHPSVLAALHAVTSAQYQVKSAEGSLLPGVSI 290 Query: 306 NGSIALTHDNSFPGYNTH-----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 GS+ H+ P +T S +L +P++ G IR+A+ + Q + Sbjct: 291 QGSLD-RHNTDNPSESTDRDYSAASITAQLKIPLYQGGSEYGQIRKAKETVGAQELKVDY 349 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 L+ K++ A + +T + V K ++ + G+ LD+L+ ++ Sbjct: 350 ARLSVRKQIMTAFAQMQAATAAITSGRKQVAAAKLALQGVIEERNVGQKITLDVLNSQQT 409 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + L A+R + L A G+ Sbjct: 410 ALDAQESLVNAQRNEVVASYSLLAATGT 437 >gi|156973189|ref|YP_001444096.1| outer membrane channel protein [Vibrio harveyi ATCC BAA-1116] gi|156524783|gb|ABU69869.1| hypothetical protein VIBHAR_00869 [Vibrio harveyi ATCC BAA-1116] Length = 445 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 18/176 (10%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNG------SIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++A +A+ I +A S P+LSL+G + T DN+ G+N G L +P++ Sbjct: 260 RIAQDIARDNISLASSGHLPTLSLDGGYNYSDTAESTADNTTDGFN----VGVNLAVPLY 315 Query: 336 DKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 G+ S +++AE SA E+ ++ + +KEV +IN + + +V Sbjct: 316 TGGRTTSEVKQAEYGYVSASEE---LEKEYRSVVKEVRAQNNNINASIGALKAYEQSVVS 372 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + + G +++D+LD R +LS A+ + + L A+G+ Sbjct: 373 AQSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSDARYNYILAGLQLRQAVGT 428 >gi|152999055|ref|YP_001364736.1| outer membrane efflux protein [Shewanella baltica OS185] gi|151363673|gb|ABS06673.1| outer membrane efflux protein [Shewanella baltica OS185] Length = 489 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 1/177 (0%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL 330 + P ++ E K A + + + + YP++ L G+ L D+S F W G + Sbjct: 291 LSQHPALKLLEAKEAQANGLVSLEQGKYYPTVFLFGNYTLYEDDSLFSQVEPDWMVGVGV 350 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PI + + A+S+ + T +T + ++ + + + ++ VT L ++ Sbjct: 351 KVPILSRDGRSGKVEAAKSALLQARYTKAQTRQDLSLLLDQSYRQLLQAEEEVTALDTSL 410 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 EL +++ L I + QG + +D +D E + V+ A+ + ++Y L G Sbjct: 411 ELATENLRLREIAFNQGLSTSIDRVDAELKLSAVKTQQLAARYRYVQAYARLMAISG 467 >gi|313683164|ref|YP_004060902.1| outer membrane efflux protein [Sulfuricurvum kujiense DSM 16994] gi|313156024|gb|ADR34702.1| outer membrane efflux protein [Sulfuricurvum kujiense DSM 16994] Length = 447 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 59/289 (20%), Positives = 127/289 (43%), Gaps = 13/289 (4%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 SYIDAR +E++++ IL ++ +++L+ ++T G SK +++++ + + L Sbjct: 167 SYIDARVSEEKVALFGPILKSHEASLQLAVRQYTAGNLSKRDMLRIQESYERARIESIKL 226 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQS-NNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + ++ LG + + + +S +P + G+ I NR D+R Sbjct: 227 SRENAAAREALNKTLGLYGEQTYYTLSTESLKRTEPAV---TESGLEKRAIANRLDMRSA 283 Query: 282 EKKLADSVAKIGIA-KSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 K + + A+ G + K+ L L S+ +NT FG KL +PIFD G+ Sbjct: 284 MKSVDYAAAQAGYSEKTRFVDELEL--SLESEKTTGEKRFNT---FGIKLPIPIFDFGQA 338 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA-VELHKKSMSL 399 + + +A++ + E +N EV + I V+ +++ + Sbjct: 339 R--VSKAQAIYNQSVHQLYERAVNIRSEVREGYAHLRYTYDIAHSYDEVIVQTNQQILEE 396 Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + Y + ++L+ +R + +++ A+ ++ K+ DL IG Sbjct: 397 TQLMYNGMLDGIYELLEDQRRAGEAKMEALDARGEVQKAQADLEYTIGG 445 >gi|254883794|ref|ZP_05256504.1| outer membrane efflux protein [Bacteroides sp. 4_3_47FAA] gi|319643522|ref|ZP_07998145.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] gi|254836587|gb|EET16896.1| outer membrane efflux protein [Bacteroides sp. 4_3_47FAA] gi|317384927|gb|EFV65883.1| outer membrane efflux protein [Bacteroides sp. 3_1_40A] Length = 447 Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 17/196 (8%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 +I + E + I L + + + F +G+ SK L +LE+++ S + + E Sbjct: 152 FIQILYADESVKINQNTLQVSQATYDRGKELFHKGSISKADLAQLESQVGSDKYQLVISE 211 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPADLIRNRPDIRY 280 S R + LL TE + + + + QP +P + + +RP+I+ Sbjct: 212 SSLRDYKLQLKQLLELDGTEEMDLVLPELADEHVLQP---LPAQEDVYQQALASRPEIQS 268 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GYNTHWSFGPKLY 331 + + +S I +AK+ P++SL+ S ++T+ DNS+ G+N G + Sbjct: 269 SKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGWNNM--IGLNIN 326 Query: 332 LPIFDKGKIKSNIRRA 347 +PIFD + KS +++A Sbjct: 327 IPIFDNRQNKSAVQKA 342 >gi|146299026|ref|YP_001193617.1| outer membrane efflux protein [Flavobacterium johnsoniae UW101] gi|146153444|gb|ABQ04298.1| outer membrane efflux protein [Flavobacterium johnsoniae UW101] Length = 444 Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 41/292 (14%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 VI ++ +Y KER+++ K ++ +F G K+ L ++ ++ +I Sbjct: 143 VIERVANNYYSVYVQKERLTLLDSNYVNTTKVRDIVQGQFDNGLAKKIDLDRIIVKMSNI 202 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL---- 271 +++ ++ + + + +G P + +++ F+ +PA L Sbjct: 203 DTERQQIKNQITLQENALKFYMGMPIETQIDMPKEE---FEV---------VPAALTQEP 250 Query: 272 -IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN-GSIALTHDNSFPGY-----NTHW 324 I NR + +K+ V ++ YP+LSL G + FP + +W Sbjct: 251 NIENRTEYLLLKKQEELLVLNKKAVQAGYYPTLSLTAGYNYIGQGPEFPWFAKPEKGVYW 310 Query: 325 S----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL-------NAIKEVENAL 373 S G L++PIF ++ +R+A+ + ++T L NA+ ++EN L Sbjct: 311 SDFSAIGLNLHVPIFTGFGTRAKVRQADVEIRSLQEDIKDTKLSLDLDYRNAMAQIENNL 370 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 +I K+ ++ A E+ +S + NY QG SL D+LD E A+ + + Sbjct: 371 VTIENQKE---NMRLATEI----LSNTKNNYLQGLASLTDLLDAENASLEAQ 415 >gi|312958805|ref|ZP_07773324.1| cobalt/zinc/cadmium efflux RND transporter, outer membrane protein [Pseudomonas fluorescens WH6] gi|311286575|gb|EFQ65137.1| cobalt/zinc/cadmium efflux RND transporter, outer membrane protein [Pseudomonas fluorescens WH6] Length = 406 Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust. Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 26/270 (9%) Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 + +I SY A +ER+ +A + L L ++ + ++ + G +S + + + ++ I Sbjct: 122 ADVIDSYYLALRAQERLDLAQRSLALAERGLVVADSRVAAGKSSPVEATRAQVQVAEIRL 181 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ ++ G AT+F + + Q +P A L + + Sbjct: 182 EVNRARIDLTDAYRRVAASTGNAATDF----ESVAPPSQSTPALPSAAQFLARLEQT-AE 236 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 +R E ++ S A +G+ K+ P + + SI +D S G L +P+F++ Sbjct: 237 LRLAELQIMQSEANVGLEKAQRIPDVDV--SIGSQYDASVRERVNL--VGVSLPIPLFNR 292 Query: 338 --GKIKSNIRRAESS-----AQEQYI-TWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 G + + RRA+ + A E + T L+ + E+ + + N+ +I+ Q A Sbjct: 293 NQGNVLAATRRADQARDLRNATELRLRTETRQALDLWQTAESEVRAFNQ--QILPAAQRA 350 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER 419 V+ + + G+++ LD+LD +R Sbjct: 351 VDAASRGFEM-------GKFNFLDVLDAQR 373 >gi|326334960|ref|ZP_08201160.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692765|gb|EGD34704.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 450 Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust. Identities = 86/408 (21%), Positives = 158/408 (38%), Gaps = 49/408 (12%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL 112 W + +L++ ++ ALQ +A I ++ I VRA P+ A+ S + P L Sbjct: 19 WGQQRELTLSQAIQYALQHKADAQKARLEIKKSEYKIQEVRAHALPNLSATGSLTYNPKL 78 Query: 113 KTN----ST--------------GQLDSDWKIDL---FGQRRHIESSLANLDSAYAQVDI 151 + ST +L W Q +S L +A + Sbjct: 79 QATYIDASTFAIPGMPPREGVLKMELGQKWSSSAELKLTQMLFNQSVFMGLKAARTTREF 138 Query: 152 AKLN-------VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 LN VI K+ +Y ++ + L L ++ E+ F G K+ Sbjct: 139 YILNEQLTQNDVIEKVAQAYWQVYQARQVLENVQSNLSLTEQTAEVVRGSFEAGLARKID 198 Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 L ++ + +++S +++ H + ++G P TE ++ + + F+ + Sbjct: 199 LDRVTVTLNNLKSAQQQALSGVQLSEHALKYMIGMPITEPINLPK---DAFKATYQLAFE 255 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFP----- 318 G + R +++ EK+ ++ L+P+L+L GS L P Sbjct: 256 KGDAS----KRIELQVLEKQKELLSLNTRAEQAGLFPTLALMGSYGYLGMGPKMPLIYGE 311 Query: 319 GYNTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 +W S G L +PIF K+ I +A T ++T L ENA Sbjct: 312 KNKVYWADYSAISLG--LSIPIFSGFGTKAKIHQALIEVDALNETLKDTRLAMDLAYENA 369 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 T + + + + V+L ++ ++ + NY QG SL D+L+ ERA Sbjct: 370 QTQLTNNLLTIDTQKENVKLAQEVLTNTQNNYHQGLASLNDLLESERA 417 >gi|187250541|ref|YP_001875023.1| outer membrane efflux protein [Elusimicrobium minutum Pei191] gi|186970701|gb|ACC97686.1| Outer membrane efflux protein [Elusimicrobium minutum Pei191] Length = 448 Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust. Identities = 77/356 (21%), Positives = 152/356 (42%), Gaps = 52/356 (14%) Query: 117 TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV------ISKLIPSYIDARHF 170 TG +D++W + G+ R +N+ SA DI + N+ I K + + Sbjct: 108 TGGVDAEWVLWSGGRVR------SNVKSAKINADIGEYNLRSVKDQIEKTVIEMCYSIIL 161 Query: 171 KERISIAHQ-ILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ Q LD+ +N+ LK+ +G +S L L+ E + +I+ + + F + Sbjct: 162 SSAVTKVQQGQLDIATQNLHEMKLKYQKGLSSNLDLLAQEVSVANIKPLVIAAKNDFELG 221 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA--------DLIRN-RPDIRY 280 + LL E L N++ ++ IP DL R D+ Sbjct: 222 NLYLRQLLNMDPEEDL--------TLTWNIW---DVRIPEVKKLEELYDLAAEYRSDLII 270 Query: 281 QEKKLADSVAKIGIAKSDLYPSLS--LNGSIALTHDNSFPGYNT--HW--SFGPKLYLPI 334 ++ + ++ A+S+ +P L+ N +N FP ++ +W S G ++ + I Sbjct: 271 SRLRVKTAQQQVKSARSEHFPQLAAFANKYYNAQTENGFPQHSNDYYWTSSVGLRISMSI 330 Query: 335 FDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 F+ +I S +++ + A+ Y Q++V AIK A + E K+ + ++ +E Sbjct: 331 FEGFRINSAVKQKQLGLEQAEADYEDLQKSVRIAIKA---AWLRLGEAKERMLTVERVIE 387 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++++ YR G S L++ D V L+ A+ Q A++ D + A+ Sbjct: 388 QSQQNVESMKKRYRAGLASRLELDD-------SVVALTNAQLQYAQAVYDGFTALA 436 >gi|265763258|ref|ZP_06091826.1| outer membrane efflux protein [Bacteroides sp. 2_1_16] gi|263255866|gb|EEZ27212.1| outer membrane efflux protein [Bacteroides sp. 2_1_16] Length = 467 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 46/259 (17%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ + + +A+LD A ++ DI + + YI + E + + L + + + Sbjct: 144 EQEKLNNRVADLDVATSENDIEQ-----SIAQVYIQILYAAESVKVNENTLQVSEAQRDR 198 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 G+ ++ +LEA++ + + T + +TL Y Sbjct: 199 GKQLLDAGSIARSDYAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELD 248 Query: 251 QSNNFQPNLYIPINIG-------IPA--DLIRN----RPDIRYQEKKLADSVAKIGIAKS 297 Q +Y+P +G +PA D+ R+ RP+I + + S IGIAKS Sbjct: 249 GEQEMQ--VYLPA-LGDENVLSPLPAKTDVFRSAVALRPEIEASKLSVEASELGIGIAKS 305 Query: 298 DLYPSLSLNGSIALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 PS+SL I H D +F G+N S G + +PIF+ + KS + +A+ Sbjct: 306 GYLPSVSLTAGIGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVEKAK 363 Query: 349 SSAQEQYITWQETVLNAIK 367 QY T Q T+L+ K Sbjct: 364 L----QYQTSQLTLLDEQK 378 >gi|256841986|ref|ZP_05547491.1| outer membrane efflux protein [Parabacteroides sp. D13] gi|256736302|gb|EEU49631.1| outer membrane efflux protein [Parabacteroides sp. D13] Length = 463 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 18/265 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K+ QG ++ L++ + +K+ E ++ E S + + LLG + Q Sbjct: 203 KYEQGTVAEYDLIRADVTVKNTEPNLLQAENSLTLAKWQLKALLGMDLDLNID-CDGQLT 261 Query: 254 NFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 +F+ +L Y+ + + + + D++ ++ K + + K D P+LSL G Sbjct: 262 DFKSSLFADYLSTDTTLSENTDLKQLDLQAEQLK-----KTLVMQKFDYLPTLSLTGLYQ 316 Query: 310 --ALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 A+ +D F Y N + G L +PIF G +++ + S + + +T N Sbjct: 317 WSAMNNDFKFKNYRWNPYSMIGITLSVPIFSGGSKFYKVKQTKVSIDQLNLQRDDTKRNL 376 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK 423 V+ + ++N K Q VE ++ +S Y G + L++ D E A A+ Sbjct: 377 QLAVKQYIDNMNTCIKKFDAAQKGVEQAERGYMISQKRYDTGAGTWLEMNDAELALTQAR 436 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 + + SI +AK+ DL +G+ Sbjct: 437 LNFNQSIYDYMVAKA--DLEKVLGN 459 >gi|182680134|ref|YP_001834280.1| TolC family type I secretion outer membrane protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636017|gb|ACB96791.1| type I secretion outer membrane protein, TolC family [Beijerinckia indica subsp. indica ATCC 9039] Length = 483 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 50/272 (18%), Positives = 118/272 (43%), Gaps = 17/272 (6%) Query: 180 ILDLYKKNI-------ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 +L+L + NI + +F G ++ + + E+ +++ SD T + + + ++ N Sbjct: 176 VLELRRNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIAN 235 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 ++G + + + + L ++ I L+ + P I+ + + A++ Sbjct: 236 FRQVIGRQPKQL-----EAAATVEKLLPSNLDTAISVALLEH-PSIQEALHNVDAAAAQV 289 Query: 293 GIAKSDLYPSLSLNGSIALTHD-NSFPGYNTH-WSFGPKLYLPIFDKGKIK-SNIRRAES 349 I + LYP + LN + T + N GY + + ++ +PI++ G S IR+A+ Sbjct: 290 KIIEGQLYPKVDLNATTQRTFNVNGMTGYQQYNGTIQGQMSVPIYENGGTTYSRIRQAKE 349 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 + + N + +A + + + AV+ + ++ + + G+ Sbjct: 350 QVTQARLQADLQKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGVRVEAQVGQR 409 Query: 410 SLLDILDIERATAKVEVDLSIAKR-QLAKSYV 440 + LD+L+ ++ V L A+R ++ SYV Sbjct: 410 TTLDVLNAQQTLLGNRVALVTAQRDRVVASYV 441 >gi|60681425|ref|YP_211569.1| putative outer membrane lipoprotein [Bacteroides fragilis NCTC 9343] gi|60492859|emb|CAH07634.1| putative outer membrane lipoprotein precursor [Bacteroides fragilis NCTC 9343] Length = 467 Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 44/258 (17%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ + + +A+LD A ++ DI + + YI + E + + L + + + Sbjct: 144 EQEKLNNRVADLDVATSENDIEQ-----SIAQVYIQILYAAESVKVNENTLQVSEAQRDR 198 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 G+ ++ +LEA++ + + T + +TL Y Sbjct: 199 GKQLLDAGSIARSDYAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELD 248 Query: 251 QSNNFQPNLYIPI----NIGIP----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSD 298 Q +Y+P N+ P D+ R+ RP+I + + S IGIAKS Sbjct: 249 GEQEMQ--VYLPALGDENVLSPLPTKTDVFRSAVALRPEIEASKLSVEASELGIGIAKSG 306 Query: 299 LYPSLSLNGSIALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 PS+SL I H D +F G+N S G + +PIF+ + KS + +A+ Sbjct: 307 YLPSVSLTAGIGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVEKAKL 364 Query: 350 SAQEQYITWQETVLNAIK 367 QY T Q T+L+ K Sbjct: 365 ----QYQTSQLTLLDEQK 378 >gi|254444471|ref|ZP_05057947.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] gi|198258779|gb|EDY83087.1| outer membrane efflux protein [Verrucomicrobiae bacterium DG1235] Length = 407 Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust. Identities = 54/295 (18%), Positives = 128/295 (43%), Gaps = 20/295 (6%) Query: 130 GQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNI 188 G +H I + ANL ++ + + + ++ +Y++ + +A Q + L++ + Sbjct: 91 GNTKHRITEAQANLRTSQESLRQVREELALEISITYVNVLKYTRLTDLAEQSVYLHQDAL 150 Query: 189 ELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYM 248 + KFT GA K ++ ++A + ++ + ++ ++ ++ L G + + Sbjct: 151 DKIEQKFTAGAGPKADVILVKARLAMAKASLEARKRQLKIAHNSYLKLTGSTPFQLV--- 207 Query: 249 QKQSNNFQPNL-YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 +P+ Y + I + P++R +L + ++ +A+S P L+ Sbjct: 208 -------EPDFPYWAMPESIDEVTFESNPNVRTAHSELQATYSRRKVAESSFRPKLNFVV 260 Query: 308 SIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 + + L IFD G+ +S IR+A S E W+ + +A+ Sbjct: 261 EGDAAESDRYETLQEDAMALVTLSYNIFDGGRRRSEIRKANSQINE--ADWK--LKDALI 316 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ----GRYSLLDILDIE 418 E EN+ ++ ++ + + +E H+ +M + Y + G+ L+++LD+E Sbjct: 317 ETENSFSNAWDELTSTAERINLLETHRDAMESVVSAYHEQFELGKRPLINLLDVE 371 Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 11/169 (6%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKL 330 N P IR E ++ K+G +S+L P LSL+ G +D F Y + Sbjct: 24 NYPKIRVLESRVQIEQNKLGAERSNLRPQLSLSMRGGEERFGNDKGFQVYGETGNASLSG 83 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE--VENALTSINEDK--KIVTKL 386 +FD G K I + AQ T QE++ +E +E ++T +N K ++ Sbjct: 84 RQLLFDGGNTKHRI----TEAQANLRTSQESLRQVREELALEISITYVNVLKYTRLTDLA 139 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + +V LH+ ++ + G D++ ++ A + L KRQL Sbjct: 140 EQSVYLHQDALDKIEQKFTAGAGPKADVILVKARLAMAKASLEARKRQL 188 >gi|269960210|ref|ZP_06174585.1| Outer membrane protein TolC [Vibrio harveyi 1DA3] gi|269835017|gb|EEZ89101.1| Outer membrane protein TolC [Vibrio harveyi 1DA3] Length = 444 Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 20/177 (11%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNG------SIALTHDNSFPGYNTHWSFGPKLYLPIF 335 ++A +A+ I +A S P+LSL+G + T DN+ G+N G L +P++ Sbjct: 259 RIAQDIARDNISLASSGHLPTLSLDGGYNYSDTAESTADNTTDGFN----VGVNLAVPLY 314 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETV----LNAIKEVENALTSINEDKKIVTKLQHAVE 391 G+ S +++AE Y++ E + + +KEV +IN + + +V Sbjct: 315 TGGRTTSEVKQAEFG----YVSASEDLEAEYRSVVKEVRAQNNNINASIGALKAYEQSVV 370 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + ++ + + G +++D+LD R +LS A+ + + L A+G+ Sbjct: 371 SAQSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSDARYNYILAGLQLRQAVGT 427 >gi|150005324|ref|YP_001300068.1| outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] gi|149933748|gb|ABR40446.1| outer membrane efflux protein [Bacteroides vulgatus ATCC 8482] Length = 447 Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 17/196 (8%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 +I + E + I L + + + F +G+ SK L +LE+++ S + + E Sbjct: 152 FIQILYADESVKINQNTLQVSQATYDRGKELFHKGSISKADLAQLESQVGSDKYQLVISE 211 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPADLIRNRPDIRY 280 S R + LL TE + + + + QP +P + + +RP+I+ Sbjct: 212 SSLRDYKLQLKQLLELDGTEEMDLVLPELADEHVLQP---LPAQEDVYQQALASRPEIQS 268 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GYNTHWSFGPKLY 331 + + +S I +AK+ P++SL+ S ++T+ DNS+ G+N G + Sbjct: 269 SKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGWNNM--IGLNIN 326 Query: 332 LPIFDKGKIKSNIRRA 347 +PIFD + KS +++A Sbjct: 327 IPIFDNRQNKSAVQKA 342 >gi|294777168|ref|ZP_06742625.1| type I secretion outer membrane protein, TolC family [Bacteroides vulgatus PC510] gi|294449037|gb|EFG17580.1| type I secretion outer membrane protein, TolC family [Bacteroides vulgatus PC510] Length = 438 Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 17/196 (8%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 +I + E + I L + + + F +G+ SK L +LE+++ S + + E Sbjct: 143 FIQILYADESVKINQNTLQVSQATYDRGKELFHKGSISKADLAQLESQVGSDKYQLVISE 202 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQ---SNNFQPNLYIPINIGIPADLIRNRPDIRY 280 S R + LL TE + + + + QP +P + + +RP+I+ Sbjct: 203 SSLRDYKLQLKQLLELDGTEEMDLVLPELADEHVLQP---LPAQEDVYQQALASRPEIQS 259 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTH---DNSFP-----GYNTHWSFGPKLY 331 + + +S I +AK+ P++SL+ S ++T+ DNS+ G+N G + Sbjct: 260 SKLSIENSKLDISVAKAGYLPTISLSASTGSMTNSASDNSWSKQMKYGWNNM--IGLNIN 317 Query: 332 LPIFDKGKIKSNIRRA 347 +PIFD + KS +++A Sbjct: 318 IPIFDNRQNKSAVQKA 333 >gi|258546293|ref|ZP_05706527.1| hypothetical protein HMPREF0198_2562 [Cardiobacterium hominis ATCC 15826] gi|258518464|gb|EEV87323.1| hypothetical protein HMPREF0198_2562 [Cardiobacterium hominis ATCC 15826] Length = 473 Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust. Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 47/305 (15%) Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + R+ IA Q +D+ + + +G + + E E + E+ Sbjct: 188 QRRMEIAEQNMDVTAEGKASAQTLHEEGVVIAADVSQAEVEYDAARLQYLQAERDRDNAA 247 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADS 288 ++ +GYPA LH+ N F + + I IG D PDI+ + L + Sbjct: 248 AALAESMGYPANTALHHAPLPDNPFSADTFANIEQLIGAAMD---THPDIKEAKAALEAT 304 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF-------GPKLYLPIFDKGKIK 341 A + K P + L A T DN+ S+ G + P+F+ K Sbjct: 305 KAAVQAVKKAGAPQVFL---YANTQDNAHLRTGGGLSYRERENTIGLGIRWPLFEGYKRH 361 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVEN-ALTSIN-----EDKKIVTKLQHAVE---L 392 +QE L A +E E AL ++ E ++ +L AVE + Sbjct: 362 ----------------YQEKALLAQQEQEEAALAALQSRLSLEMRQAYRQLTTAVEKQAI 405 Query: 393 HKKSMSLSMINY--RQGRY-----SLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 +KS + + +NY R GRY SL ++L +R+ + + L+ A R+ ++ + L + Sbjct: 406 AEKSAASAQLNYQTRLGRYRAGVGSLNELLQAQRSLNTMRIALADATRERHQAALQLLFS 465 Query: 446 IGSGY 450 +G + Sbjct: 466 VGKAF 470 >gi|322508484|gb|ADX03938.1| Outer membrane protein [Acinetobacter baumannii 1656-2] gi|323518105|gb|ADX92486.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715] Length = 425 Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 70 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 128 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 129 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 188 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 189 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 232 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 233 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 289 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 290 QLNVPLYDDGLNRANVKKAQA 310 >gi|150007002|ref|YP_001301745.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] gi|298377428|ref|ZP_06987381.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] gi|149935426|gb|ABR42123.1| outer membrane efflux protein [Parabacteroides distasonis ATCC 8503] gi|298265842|gb|EFI07502.1| outer membrane efflux protein [Bacteroides sp. 3_1_19] Length = 463 Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 18/265 (6%) Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 K+ QG ++ L++ + +K+ E ++ E S + + LLG + Q Sbjct: 203 KYEQGTVAEYDLIRADVTVKNTEPNLLQAENSLTLAKWQLKALLGMDLDLNID-CDGQLT 261 Query: 254 NFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI- 309 +F+ +L Y+ + + + + D++ ++ K + + K D P+LSL G Sbjct: 262 DFKSSLFADYLSTDTTLSENTDLKQLDLQAEQLK-----KTLVMQKFDYLPTLSLTGLYQ 316 Query: 310 --ALTHDNSFPGY--NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 A+ +D F Y N + G L +PIF G +++ + S + + +T N Sbjct: 317 WSAMNNDFKFKNYRWNPYSMIGITLSVPIFSGGSKFYKVKQTKVSIDQLNLQRDDTKRNL 376 Query: 366 IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK 423 V+ + ++N K Q VE ++ +S Y G + L++ D E A A+ Sbjct: 377 QLAVKQYIDNMNTCIKKFDAAQKGVEQAERGYMISQKRYDTGAGTWLEMNDAELALTQAR 436 Query: 424 VEVDLSIAKRQLAKSYVDLYIAIGS 448 + + SI +AK+ DL +G+ Sbjct: 437 LNFNQSIYDYMVAKA--DLEKVLGN 459 >gi|53713163|ref|YP_099155.1| outer membrane efflux protein [Bacteroides fragilis YCH46] gi|253566830|ref|ZP_04844282.1| outer membrane efflux protein [Bacteroides sp. 3_2_5] gi|52216028|dbj|BAD48621.1| outer membrane efflux protein [Bacteroides fragilis YCH46] gi|251944393|gb|EES84882.1| outer membrane efflux protein [Bacteroides sp. 3_2_5] gi|301162884|emb|CBW22431.1| putative outer membrane lipoprotein precursor [Bacteroides fragilis 638R] Length = 467 Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 44/258 (17%) Query: 131 QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 ++ + + +A+LD A ++ DI + + YI + E + + L + + + Sbjct: 144 EQEKLNNRVADLDVATSENDIEQ-----SIAQVYIQILYAAESVKVNENTLQVSEAQRDR 198 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 G+ ++ +LEA++ + + T + +TL Y Sbjct: 199 GKQLLDAGSIARSDYAQLEAQVSTDRYQLVTAQ----------ATLQDYKLQLKQLLELD 248 Query: 251 QSNNFQPNLYIPI----NIGIP----ADLIRN----RPDIRYQEKKLADSVAKIGIAKSD 298 Q +Y+P N+ P D+ R+ RP+I + + S IGIAKS Sbjct: 249 GEQEMQ--VYLPALGDENVLSPLPTKTDVFRSAVALRPEIEASKLSVEASELGIGIAKSG 306 Query: 299 LYPSLSLNGSIALTH----DNSFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRAES 349 PS+SL I H D +F G+N S G + +PIF+ + KS + +A+ Sbjct: 307 YLPSVSLTAGIGTNHTSGSDFTFGEQVKNGWNN--SIGLSISVPIFNNRQTKSAVEKAKL 364 Query: 350 SAQEQYITWQETVLNAIK 367 QY T Q T+L+ K Sbjct: 365 ----QYQTSQLTLLDEQK 378 >gi|325275403|ref|ZP_08141346.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324099465|gb|EGB97368.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 235 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 45/237 (18%), Positives = 95/237 (40%), Gaps = 21/237 (8%) Query: 3 ILRAIFSL--FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTS 60 + +A F+L + LL C+ P P + +D +WW SFN Sbjct: 1 MTKAPFALIPLLALLGACSQTTPVDNAVAP--PPGWQSPAVPQAQAVDIERWWASFNSPQ 58 Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 L +L+ + Q + + A R+ A ++ L P AS + LK +L Sbjct: 59 LARLIDQSRQGSHDLKAAMARVRQAGADVRIAGGTLLPRLDASANAYRQRLLKGQGYSEL 118 Query: 121 D----------------SDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPS 163 D + +++D +G+ S +L ++ D +L++ ++ + Sbjct: 119 DASSRERTYHYFNTALTASYEVDFWGRNAATRDSAGHSLQASELDRDTLELSLAGQVADT 178 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 Y+ A +E+ IA L +K +++ ++ G+ + L L + ++ + + +P Sbjct: 179 YLAALAAQEQTRIATLNLGNAQKILDVVRTRYQAGSATALELARQQSLVAGQQRQLP 235 >gi|288800027|ref|ZP_06405486.1| putative outer membrane efflux protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333275|gb|EFC71754.1| putative outer membrane efflux protein [Prevotella sp. oral taxon 299 str. F0039] Length = 497 Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/208 (19%), Positives = 90/208 (43%), Gaps = 6/208 (2%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 +D N I ++ +Y K++ ++A L L +K E H +G ++ + +K+ Sbjct: 194 IDATVQNTIYEVDKTYWLVVSLKQKQNLAKSYLHLVEKLNEDVHKMIKEGVATRANGLKV 253 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268 + ++ E + +E + + L G P + + N + + +I I Sbjct: 254 DVKVNEAEMQVLEVENGLSLAKMLLCQLCGLPVDTPITLEDESKENLSSS-TVSEDISIE 312 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----W 324 + +RP++R + SV K I KS P ++L G +++ + F G+ W Sbjct: 313 -EAFYHRPELRMLQNNFDISVQKTKITKSAYLPQVALTGGYLISNPSVFNGFQKKFSGVW 371 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 + G + +P++ + R +E++++ Sbjct: 372 NVGVLVKVPVWSWSEGVYKTRASEAASR 399 >gi|289662080|ref|ZP_06483661.1| TolC protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 460 Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 38/182 (20%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--------DNSFPGY 320 A I + P ++ Q+ +++ + A++ A++ P+L+L+GS+ T+ D + + Sbjct: 239 ATAIADNPALKAQQLQVSAAEAQVSAARAGHLPTLNLSGSLGRTNSWGGGTDVDTAAGNF 298 Query: 321 NTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------E 360 T+ S G L +PIF G +S +R+A S Q T++ + Sbjct: 299 TTNNRNIDTDSIGITLSIPIFAGGATQSAVRQALSQRDIQQDTYEQQKRALDRNTRNAYQ 358 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYS 410 TV+ I EVE ++ + Q +E+ +++++ + +NY Q RY+ Sbjct: 359 TVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYN 418 Query: 411 LL 412 L Sbjct: 419 FL 420 >gi|225851013|ref|YP_002731247.1| outer membrane efflux protein [Persephonella marina EX-H1] gi|225646233|gb|ACO04419.1| outer membrane efflux protein [Persephonella marina EX-H1] Length = 457 Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL 330 + NRPD+ +++ ++ KSDL+P++ GS L + F W+ G L Sbjct: 270 MNNRPDLIALRQRVENAKRMADFTKSDLFPTIGAFGSYELNDRKTPFGTDGRWWTIGVAL 329 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALTSINEDKKIVTKLQHA 389 +FD G N ++ QY+ ++ IK V A + K+ +T + Sbjct: 330 NWKVFD-GFQSINKYKSAKEIYRQYLHQKKGFEEYIKFSVYKAYAELQTAKEKLTTAKQN 388 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 ++ ++ + ++ Y+ S++D+LD + K+ DL+ A Sbjct: 389 LKWAEEVLKITEKRYKNQMASMIDLLDTQTMYDKISFDLAKA 430 >gi|254490305|ref|ZP_05103494.1| outer membrane efflux protein [Methylophaga thiooxidans DMS010] gi|224464438|gb|EEF80698.1| outer membrane efflux protein [Methylophaga thiooxydans DMS010] Length = 432 Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust. Identities = 58/298 (19%), Positives = 127/298 (42%), Gaps = 26/298 (8%) Query: 129 FGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKK 186 G +R L S +VD + L+++ ++ +I+ + +ER+ +A L+L + Sbjct: 115 LGDKRQSRVDLVEQQSDVVRVDRKVKALDLLGQVTRRFINVLNSQERVKLAEVGLELAQT 174 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 ++ + + + K L + EA ++ E + ++ F + ++ L G F Sbjct: 175 TLKEVNRRVSAAVAPKADLGRAEASVQQAELTLLAEQRQFESHRMALANLWGSYQPAF-- 232 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLI----RNRPDIRY--QEKKLADSVAKIGIAKSDLY 300 + +LY N +P D + + P I E ++ D A++ +A++ Sbjct: 233 ------DEVSGSLY-SFNEAMPFDALFSKAQQNPQIEMFAAEARVRD--AEVRLARTQQV 283 Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 L+ S+ + D + + +P+F + + +S I A ++ E Q+ Sbjct: 284 ADLTW--SVGIRRDEGI----DDSALVAGISMPLFSQERAQSRIEAALAARNEVTYRRQD 337 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQ-HAVELHKKSMSLSMINYRQGRYSLLDILDI 417 +L E+ A + ++ + KLQ H + S+ + + Y++G YS LD+L + Sbjct: 338 VLLQLHTELYRAYSGRSQAITSIQKLQQHIIPKLNTSLEQTRVGYQRGLYSYLDLLTV 395 >gi|91977809|ref|YP_570468.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] gi|91684265|gb|ABE40567.1| outer membrane efflux protein [Rhodopseudomonas palustris BisB5] Length = 423 Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust. Identities = 79/388 (20%), Positives = 154/388 (39%), Gaps = 50/388 (12%) Query: 64 LVKIALQQNLTI-------LQATERINAAKENILSVRADLFPS--------------SYA 102 L +A Q LT+ L + R+ AA+ N+ R S S+ Sbjct: 21 LTGVAHSQTLTMGAALQRALATSPRLTAAERNVGIARGQRIQSGALINPEISYDQDDSFG 80 Query: 103 SISHRFIPNLKTNSTGQLDSDWKIDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLI 161 S ++R + ++ L +L+G+R I + A LD+A + +L V+S+ Sbjct: 81 SGAYRGTRSAES----ALQISQMFELWGKRDARIAAGQAGLDTAAIERQAVRLEVLSEAA 136 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 ++++ + RI I + +D K L + GA+S + E +++D Sbjct: 137 IAFLNVLGLQRRIEILDEQVDAIDKLTPLLQRRVDAGASSIAETGRAEVASALVKADRER 196 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 + S ++ L+G A +F + +P + + I A+ P + Sbjct: 197 TKASLATARRELAILIGDTAPKFSAVSGRLDAIGRPPSFQAVVAAIDAN-----PQLVRW 251 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIAL-----THDNSFPGYNTHWSFGPKLYLPIFD 336 + A A++ +A+ YP ++L S+ T DN+ + +P+FD Sbjct: 252 QAIYAQRNAQLILARLKPYPDVNL--SVGWRRYNETGDNAV-------RLAVSVPIPLFD 302 Query: 337 --KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 +G I S +A E+ ++ A + + S+ E + + + + Sbjct: 303 QNQGNILSAQESLAKTAAERKANRNTLIVVAGRAYDTLQGSLRE---LAILRETGIPKAR 359 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATA 422 + + Y QGRYSLL++LD + + A Sbjct: 360 DASAAIFEGYGQGRYSLLEVLDAQASVA 387 >gi|220931348|ref|YP_002508256.1| outer membrane efflux protein [Halothermothrix orenii H 168] gi|219992658|gb|ACL69261.1| outer membrane efflux protein [Halothermothrix orenii H 168] Length = 471 Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust. Identities = 60/301 (19%), Positives = 135/301 (44%), Gaps = 39/301 (12%) Query: 139 LANLDSAYAQVDIA-------KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 L +D A V++A K + + +LI +Y + +R+ + + LDL ++ E+ Sbjct: 141 LLGIDQARKGVELARSVLEQKKEDTLYQLINTYYNTLLLSDRLQVEEEGLDLIREQKEVI 200 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQ 251 G K L+++E E + ++ +++ + + + G + +++Q Sbjct: 201 RAGIEAGTILKTDLLQVEIEENKAWQRLQKVKNQYKLALKQLYVMSGLDKS----VLKEQ 256 Query: 252 SNNFQPNLYIP-INIGIPADLIR----NRPDIRY---QEKKLADSVAKIGIAKSDLYPSL 303 + + P +NI + LI+ NRPD++ E+ + +++ + K +PS Sbjct: 257 EVILKKPQFKPEVNINDLSSLIKLAKENRPDLKMLSINEEMIKNNIT---MEKRSNWPSF 313 Query: 304 SLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS-----AQEQYITW 358 ++G+ + + + W+ LP+F GK +++ + ++QY++ Sbjct: 314 MVSGNYSWQGE-ELKFEDPEWTVTISGSLPLFQGGKSGKRLKKINNEFDKIREKKQYVSE 372 Query: 359 QETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMIN--YRQGRYSLLDIL 415 V EV N INE ++ +V + Q+ L+K +L ++N Y+ G + LD++ Sbjct: 373 MVEV-----EVTNVFNKINELEENVVIQDQN---LNKAQENLRLVNSRYKVGMVTNLDVM 424 Query: 416 D 416 + Sbjct: 425 N 425 >gi|227357941|ref|ZP_03842284.1| type I secretion outer membrane protein [Proteus mirabilis ATCC 29906] gi|227161850|gb|EEI46879.1| type I secretion outer membrane protein [Proteus mirabilis ATCC 29906] Length = 450 Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust. Identities = 48/281 (17%), Positives = 122/281 (43%), Gaps = 4/281 (1%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I +LI +YI + ++++ + ++Y+K + S F G +K + ++E + Sbjct: 140 LIIRLIDNYIQVAYTQDKLLLNQAQQEIYQKQLASSQRLFELGEGTKTDIAEIETRLYLT 199 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIRN 274 +S L+ + +S ++G H + F P + + I+N Sbjct: 200 QSQYTDLQLEIEKAKNKLSAMIGSQLPTHEHIAKLTDTKFVLQSLAPDDYSTWEKNAIQN 259 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPKLY 331 I+ ++A + +I + + +P++ + + ++ +S N + + G + Sbjct: 260 NLKIQSARHEMAIAKQEIEKNRGEFFPTVQFYAAYSSSNSDSNNTINQKYQSANVGFYVS 319 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+F+ GK +++R++ + Q + N ++E+ + + + AV Sbjct: 320 MPLFNGGKTTASMRQSTAKYQMSAFERDAIIQNIMQELRYQYQICSTSHIKLMAFEQAVS 379 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 K ++ + +Y G+ +++D+L+ E + + DL AK Sbjct: 380 SAKLQLNATRKSYVGGQRTMVDVLNAEELLYRAQQDLIKAK 420 >gi|167754428|ref|ZP_02426555.1| hypothetical protein ALIPUT_02722 [Alistipes putredinis DSM 17216] gi|167659053|gb|EDS03183.1| hypothetical protein ALIPUT_02722 [Alistipes putredinis DSM 17216] Length = 451 Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust. Identities = 78/402 (19%), Positives = 163/402 (40%), Gaps = 31/402 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI--PNLKTNST 117 SL+ ++ A + N+ I Q ++ + + R P A++ F +L +N+T Sbjct: 32 SLDDCIRYAHEHNIQIQQQALQVEQRSVELNTSRHSRLPDLGANLGTNFSFGRSLISNNT 91 Query: 118 --------GQLDSDWKIDLF--GQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 G L + +F G+ H I + +L +A +D + +V ++ Y+D Sbjct: 92 YADNNQVSGSLGVSASLPVFMGGRINHEIAAGKLSLKAAAQDLDRIREDVSVNIMSYYLD 151 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 KE + +A Q L L + +E S + G ++ L + EA + + E + Sbjct: 152 VLVAKELVDVAEQALALSTQQVERSREQVRTGKVAESVLYENEALLAADEYKLTQSRNDL 211 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR----NRPDIRYQE 282 +++ +S L + E + ++ + ++ PA+++ NRP I+ + Sbjct: 212 SLSLLALSQALNRTSAEGFDIVAPTFDSL--TVESMRHLRNPAEVLSYALDNRPRIQAER 269 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY----------- 331 +L ++ + ++++ YP ++L G +SF + +FG + Sbjct: 270 FRLEQALRAVRMSRAAYYPQITLTGGYGTNVYHSFATGAVNPAFGRQFRNNSTEYVGVAI 329 Query: 332 -LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PIF++ ++++R A+ + Q + E KE+E A + + A+ Sbjct: 330 NIPIFNRMATRNSVRTAKLGVRSQQLVLTEAEQTLQKEIETAYYQADAALLKYRSAEKAL 389 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 + + Y GR + D D + K E D AK Sbjct: 390 NSAQVAFRYEAEKYAAGRSTTFDYNDAKTRMQKAESDQIQAK 431 >gi|126641814|ref|YP_001084798.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978] Length = 412 Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 57 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 115 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 116 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 175 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 176 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 219 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 220 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 276 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 277 QLNVPLYDDGLNRANVKKAQA 297 >gi|71905936|ref|YP_283523.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] gi|71845557|gb|AAZ45053.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] Length = 420 Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust. Identities = 89/405 (21%), Positives = 168/405 (41%), Gaps = 54/405 (13%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS------SYASISHRFIPNLKT 114 L KL +A++ + ++L A E+I AA+ + S A FP+ + S NL Sbjct: 35 LPKLEALAMESSRSVLAAREQITAARHAVES--AGAFPNPELEYLGGTARSRGVGGNLGD 92 Query: 115 NS----TGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 T LD W+ + I ++ A L + A V + + +++L Y + Sbjct: 93 ARSVALTQPLDMPWR-----RAARIGAAEAGLAATSAAVRAFEADSLARLRLRYFEVLRR 147 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 + A + + L + L+ G + L+K +AE ++ + FR V Sbjct: 148 DAELKNAREDMSLMESVRSRIALRVETGEAPRFELIKADAE--ALNAQKSAQAAGFR--V 203 Query: 231 HNISTLL-----GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +LL G EF +Q + + P L P G+ L PD+ ++ Sbjct: 204 EQARSLLRQAVGGALPPEF--GLQGRLRDV-PEL--PPLDGLRKQLGETSPDLARARAEM 258 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK-----GKI 340 + ++ + K +PS++L S+ + P G + +P++D+ G+ Sbjct: 259 VRAQHQLDLEKRQRWPSIALKASM-----DEDPETRAS-KVGVVVSIPLWDRRSGPIGEA 312 Query: 341 KSNIRRA--ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA-VELHKKSM 397 + + R E +AQE + Q V A+++ E A + VT L+ V + ++ Sbjct: 313 AAQLSRTRHEFAAQEFSLAQQLDV--AVQQYEIAQSQ-------VTALEGGIVRQAEAAL 363 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 +S YR G L++LD +R +L A+ +LA ++V++ Sbjct: 364 KVSEAAYRFGERGFLEVLDAQRVFRAARAELIAARYELAAAWVEI 408 >gi|193077392|gb|ABO12196.2| Putative RND family drug transporter [Acinetobacter baumannii ATCC 17978] Length = 442 Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 87 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 146 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 206 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 249 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 250 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 306 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 307 QLNVPLYDDGLNRANVKKAQA 327 >gi|184158165|ref|YP_001846504.1| outer membrane protein [Acinetobacter baumannii ACICU] gi|332872715|ref|ZP_08440682.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6014059] gi|183209759|gb|ACC57157.1| Outer membrane protein [Acinetobacter baumannii ACICU] gi|332739109|gb|EGJ69969.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6014059] Length = 442 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 87 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 146 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 206 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 249 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 250 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 306 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 307 QLNVPLYDDGLNRANVKKAQA 327 >gi|169795889|ref|YP_001713682.1| putative outer membrane protein [Acinetobacter baumannii AYE] gi|213157415|ref|YP_002319460.1| outer membrane efflux protein [Acinetobacter baumannii AB0057] gi|215483377|ref|YP_002325588.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB307-0294] gi|301347809|ref|ZP_07228550.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB056] gi|301512223|ref|ZP_07237460.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB058] gi|301595920|ref|ZP_07240928.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB059] gi|332854423|ref|ZP_08435355.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6013150] gi|332868470|ref|ZP_08438182.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6013113] gi|88758844|emb|CAJ77846.1| Putative RND family drug transporter [Acinetobacter baumannii AYE] gi|169148816|emb|CAM86685.1| putative outer membrane protein [Acinetobacter baumannii AYE] gi|213056575|gb|ACJ41477.1| outer membrane efflux protein [Acinetobacter baumannii AB0057] gi|213988703|gb|ACJ59002.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB307-0294] gi|332727999|gb|EGJ59391.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6013150] gi|332733357|gb|EGJ64544.1| type I secretion outer membrane protein, TolC family [Acinetobacter baumannii 6013113] Length = 442 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 87 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 146 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 206 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 249 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 250 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 306 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 307 QLNVPLYDDGLNRANVKKAQA 327 >gi|270340096|ref|ZP_06203541.1| outer membrane efflux protein [Prevotella bergensis DSM 17361] gi|270332725|gb|EFA43511.1| outer membrane efflux protein [Prevotella bergensis DSM 17361] Length = 435 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 40/357 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR--FIPNLKT--- 114 +L + ++ AL N+++ + + + +A E++ +A L PS AS S + P +T Sbjct: 15 TLQQCIEYALSNNISLRKTSIKRLSALEDVKLSQAALLPSLSASTSQNVTYSPWPETGSY 74 Query: 115 ----------------NSTGQLDSDWKIDLFGQRRH------IESSLANLDSAYAQVDIA 152 N + + W + G+ R+ + + A LDSA I Sbjct: 75 KIAGDKVQASVDKAYYNGSYVVSGSWTVWNGGRNRNQVKANKLVADQAALDSA-----IT 129 Query: 153 KLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 ++ ++ Y+ + KE +++ Q L+ KN E G+ SK L +L A+ Sbjct: 130 ANSIQEQIAQLYVQILYSKEAVNVNKQTLETSMKNEERGREFVNVGSMSKADLAQLTAQR 189 Query: 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E + E + R + LL E + + + IP + + + Sbjct: 190 AQDEYALVQAESNLRDYKRQLKKLLQITDQEEFDVIVPLATDDMALQAIPGVTVVYENAL 249 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFPGYNTHWSFGPK 329 +RP+IR + S I IAK+ P+++ N G+ + +N+ G +FG Sbjct: 250 NSRPEIRNAMLGIKSSDLNIKIAKALKLPTVAANVGVGTNTTSMNNNAWGAQLKNNFGVN 309 Query: 330 ----LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA-LTSINEDKK 381 + +PIFD + K+ + +A S QE + +E +EN L ++N +K Sbjct: 310 GGLSVSVPIFDNRQTKTAVNKALLSKQEFELDLKEQQTTLYSTIENYWLQALNNQEK 366 >gi|213162995|ref|ZP_03348705.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425163|ref|ZP_03357913.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586607|ref|ZP_03368433.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213619419|ref|ZP_03373245.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649980|ref|ZP_03380033.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855637|ref|ZP_03383877.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289826839|ref|ZP_06545749.1| outer membrane protein OprM [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 128 Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%) Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLN-AIKEVENALTSINEDKKIVTKLQHAV 390 +P+F G +++++ RA Q + I W E V+ A ++V + L V Q AV Sbjct: 1 MPLFHGGALRADLDRAHVQKQIE-IAWYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAV 59 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 E + + L+ + +++G L +LD R + L + + + LY A+G G+ Sbjct: 60 EASQIAYELAGLRFQEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIISLYKALGGGW 119 >gi|293373450|ref|ZP_06619805.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] gi|292631588|gb|EFF50211.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] Length = 445 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 34/316 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 32 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 91 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ A+ ++ + +Y Sbjct: 92 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAREDIAINVTSAY 150 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E IAH +DL K +L ++ QG S EA+ + + ++ ++ Sbjct: 151 LQVLFNQELSKIAHNQIDLSKD--QLKRIQGLQGVGKASSSEVAEAQARVAQDEMTAVQS 208 Query: 225 --SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ Sbjct: 209 DNTYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LTYKPSIKAA 265 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLY 331 E +L S+ I IA+S YP LS + + + ++SF N + G L Sbjct: 266 EYRLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSESSFGSQMKNNLNKYIGFNLS 325 Query: 332 LPIFDKGKIKSNIRRA 347 +PIF++ ++ IR A Sbjct: 326 VPIFNRFATRNRIRTA 341 >gi|260554968|ref|ZP_05827189.1| outer membrane protein tolC [Acinetobacter baumannii ATCC 19606] gi|260411510|gb|EEX04807.1| outer membrane protein tolC [Acinetobacter baumannii ATCC 19606] Length = 442 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 87 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 146 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + + +E Y Q P+ +PIN IPA+L Sbjct: 206 QAQSNLTV-------------SEAQFY---QVTGITPDNLVPINQLPTIPANLDEILAQT 249 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 250 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 306 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 307 QLNVPLYDDGLNRANVKKAQA 327 >gi|153006979|ref|YP_001381304.1| outer membrane efflux protein [Anaeromyxobacter sp. Fw109-5] gi|152030552|gb|ABS28320.1| outer membrane efflux protein [Anaeromyxobacter sp. Fw109-5] Length = 497 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 48/277 (17%), Positives = 111/277 (40%), Gaps = 12/277 (4%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 ++ A+ +++ + +Y K+ + + ++L++ ++ + +++ G +K+ ++ Sbjct: 179 IENARRDLLFGVAQAYYGVAALKQSVEVTERLLEIARRQESDARVRYQAGTIAKVGYLRA 238 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT-EFLHYMQKQSNNFQPNLYIPINIGI 267 E + E D+ S+ ++TLL P E + L Sbjct: 239 EIDRARAEQDLRRSRNSYESARIALATLLDRPVDFEVTDPPEPDLPPDLAQLEEAA---- 294 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 +R+R D++ + + A + +P ++ G + F G T W+ G Sbjct: 295 ----LRHRNDVQAARRNVELQRASRNASWGRYFPDVAAFGLYQGQNAAGFSGQETAWAAG 350 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 L + D G +S +R + E + T A +EV A+ + + K + Sbjct: 351 VGLSWTLLDGGLRESQLREGNAKVAEAEASAASTEALARREVRQAILDLESARANAAKAR 410 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 +L ++ L ++YR G + ++ D ATA++ Sbjct: 411 EQRDLAAENQRLVDVSYRAGAATAVEQAD---ATAEL 444 >gi|319795670|ref|YP_004157310.1| type I secretion outer membrane protein, tolc family [Variovorax paradoxus EPS] gi|315598133|gb|ADU39199.1| type I secretion outer membrane protein, TolC family [Variovorax paradoxus EPS] Length = 471 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 55/269 (20%), Positives = 122/269 (45%), Gaps = 27/269 (10%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + ++ + IA + +K +E + L+ + G +++ ++ E+ + S ++ + Sbjct: 170 AVVQVHRYQTLLDIAKDQVQAVEKVMETAQLRASAGISTQSDPIQAESRVDSARANRLQV 229 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + + TLLG + + + Q IP++I +P D + PD+ Sbjct: 230 QTQLAQWRERLRTLLGGAVPQVIAPLPDQLAR-----SIPMDI-VPDDGLL--PDVLVAR 281 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGS----IALTHDNS-FPGYNTHWSFGPKLYLPIFDK 337 + + A+I IA++ YP+LSL+ S +A T+ NS P + S L ++ Sbjct: 282 AERQAATAQIDIARAQRYPTLSLDASANKAMAGTNANSNAPERGLNHSIALNLSSVLYQG 341 Query: 338 GKIKSNIRR---AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 G + + +R AE +A ++ T + V + + + I ++ A+ K Sbjct: 342 GALDAQVRSAIAAEEAAGQRVETARLRVGDQARSFREQI--IGAQARL-----GALASRK 394 Query: 395 KSMSLSMINYRQ----GRYSLLDILDIER 419 ++++++ YR+ G S+LD+L+ E+ Sbjct: 395 RTIAIARDLYREQYKLGTRSILDLLNAEQ 423 >gi|226943743|ref|YP_002798816.1| type I secretion outer membrane protein [Azotobacter vinelandii DJ] gi|226718670|gb|ACO77841.1| Type I secretion outer membrane protein [Azotobacter vinelandii DJ] Length = 472 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 18/220 (8%) Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK--QSNNFQPNLYIP 262 ++ L A I ++ +D R++ +S ++G P E L ++ + Q L + Sbjct: 201 VLDLRARIDALAADEVDARNQVRLSREELSEVIGRPVQERLSRIRDDIELQAPQETLEVW 260 Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 I+ I A+ P ++ ++ LA + A I K YPSLSLN S AL D + T Sbjct: 261 IDRAIAAN-----PGLKARQDALAAADAAIREGKGGHYPSLSLNLS-ALRSDAGYDNNQT 314 Query: 323 ----HWSFGPKLYLPIFDKGKIKSNIR---RAESSAQEQYITWQETVLNAIKEVENALTS 375 ++S G L +PI+ G + +R SA+++ + V KE ++ + Sbjct: 315 NRYDNYSAGIALQVPIYSGGSTSARVRALHNDRDSAEQELEAMRRQVF---KETTSSYLT 371 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 + + ++A+E KKS + ++ G + D+L Sbjct: 372 AQASVERIRASRNALESAKKSTEAAEKGFQFGVVNAADVL 411 >gi|332519161|ref|ZP_08395628.1| outer membrane efflux protein [Lacinutrix algicola 5H-3-7-4] gi|332045009|gb|EGI81202.1| outer membrane efflux protein [Lacinutrix algicola 5H-3-7-4] Length = 435 Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 20/252 (7%) Query: 137 SSLANLDSAYAQVDIAK-------LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIE 189 S L L SA ++I+K L V +I +Y + +E I+I + +D+ +KN+ Sbjct: 110 SYLVGLQSAKVYLEISKNAKTKTDLEVRKAVINAYGNVLLAEESIAILQRNIDVLEKNLN 169 Query: 190 LSHLKFTQGATSKLSLVKLEAEIKSIESDI--PTLEKSFRMNVHNISTLLGYPATEFLHY 247 + F G + S+ +L+ + S++S++ T K + N++ +G P E Sbjct: 170 DTTKIFENGLEEEESVEQLKITLSSVKSNLNNTTRLKDLAYQMFNLT--IGKPINETTVL 227 Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS--L 305 + N I +N+ A+ + N D + + + + KS PSL+ + Sbjct: 228 TEDLDALTLEN--INLNLLDTANNVENTIDYKIAKNNKVSQELLVKLEKSKALPSLNAFI 285 Query: 306 NGSIALTHDN-SFPGYNTHWS----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 NG+ + SF + W FG L +PIF G + +RAE + Q+ I+ E Sbjct: 286 NGAYTGNRETFSFTNTDKKWYGSSIFGVSLNIPIFSSGMRSAATQRAEINLQKAEISLTE 345 Query: 361 TVLNAIKEVENA 372 T E+E+A Sbjct: 346 TQQMLSLEIESA 357 >gi|34580511|ref|ZP_00141991.1| hypothetical protein [Rickettsia sibirica 246] gi|28261896|gb|EAA25400.1| unknown [Rickettsia sibirica 246] Length = 194 Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 11/198 (5%) Query: 148 QVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVK 207 QV IA+ S + SY + ++I + ++++ + +L+ + G +S+ + Sbjct: 2 QVSIARQ---SNVTISYFNLLVLDKQIYLTEKLIEAQTEIYKLNQKLYNLGVGDLISVSE 58 Query: 208 LEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH---YMQKQSNNFQPNLYIPIN 264 +E+ + +P L++ + L+G ++ Y K + F P L + Sbjct: 59 AASELALTKLSLPPLKQQRHEQETTLKILVGRIPENIVNGLIYRNKPIDYF-PALPVLPQ 117 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH---DNSFPGYN 321 I +P++L+ RPDI+ E+ L + + K+ +P +SL G + + F Sbjct: 118 I-LPSELLEQRPDIKAAEQNLLAADVNLKTIKATYFPQISLTGLLGFGSNKLNTLFTNSA 176 Query: 322 THWSFGPKLYLPIFDKGK 339 W G + PIFD GK Sbjct: 177 ETWQVGGNIAGPIFDFGK 194 >gi|332304881|ref|YP_004432732.1| type I secretion outer membrane protein, TolC family [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172210|gb|AEE21464.1| type I secretion outer membrane protein, TolC family [Glaciecola agarilytica 4H-3-7+YE-5] Length = 437 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 63/317 (19%), Positives = 141/317 (44%), Gaps = 40/317 (12%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK- 213 N+I + + +Y D ++ ++ A + +E + +F G T+ + + +A+ Sbjct: 119 NLILRTVSAYFDTLQAQDDLAFARAEKRAIARQLEQTKQRFEVGLTAITDVHEAQAQYDT 178 Query: 214 SIESDIPTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADL 271 S+ ++I + E + N+ + + G +P L+ Q F +L P N+ D Sbjct: 179 SVAAEI-SAENAVETNLEALREITGIYHPDLNVLNTEQ-----FSASLPTPANVN---DW 229 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDL-------YPSLSLNGSIALTHDNSF---PG-- 319 ++ + +L S A + IAK D+ YP++ ++GS + F PG Sbjct: 230 LKT---AEQRNLELLVSNASVDIAKFDIKSARSGHYPTVGISGSANSNDTDGFAINPGAG 286 Query: 320 ----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV-ENALT 374 +NT + + +P++ G++ +N+ SA+ +++ E + V N + Sbjct: 287 GSDRFNT-YGLTLSVDVPLYTGGRVSANVE----SAKHRFVATSEDRERIHRSVIRNVRS 341 Query: 375 SINEDKKIVTKL---QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 + N+ K ++++ + AV + ++ + + G +++D+LD R +LS A Sbjct: 342 NYNDIKAAISRIKAFEQAVVSAQSALKATEAGFDVGTRTIVDVLDSTRNLFDARRNLSSA 401 Query: 432 KRQLAKSYVDLYIAIGS 448 + S ++L +A G+ Sbjct: 402 RYGYVISVLNLKLAAGT 418 >gi|108758394|ref|YP_633185.1| HAE1 family efflux transporter outer membrane efflux protein [Myxococcus xanthus DK 1622] gi|108462274|gb|ABF87459.1| efflux transporter, HAE1 family, outer membrane efflux protein [Myxococcus xanthus DK 1622] Length = 462 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 58/294 (19%), Positives = 129/294 (43%), Gaps = 19/294 (6%) Query: 157 ISKLIPSYIDARHFKE--RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +++++ S + A E R+ + Q L+ + L+ + GA ++L +V++E ++ Sbjct: 175 LAQVLVSTVAAERAAEINRVGL-RQALERFA----LAQRTYELGAGNQLDVVRVEQDVAV 229 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHY---MQKQSNNFQPNLYIPINIGIPADL 271 S + ++ R + + +G+ + +Q N Q ++ DL Sbjct: 230 ARSALVAGDEQLRRSREALGLAVGFGNAVGVSRDFNLQGLVNETQRACTPLKDMNERTDL 289 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS-IALTHDNSFPGYNTHWSFGPKL 330 + +R Q + DS + A + P+L L+ + + LT D F G WS L Sbjct: 290 VASR----AQLESARDSRQQ---ATAGYLPTLGLSSTAVGLTTDPGF-GRVAIWSVSAVL 341 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PI++ G IR E ++ + T + +V A ++ + +VT + Sbjct: 342 SVPIWEGGLRGGLIREREGLERQAAEALESTRRDVSIQVAQARRAVEVAEALVTTAVASR 401 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYI 444 +L ++ L+ ++ GR S L+++ A + E+ L + + +L ++ +D ++ Sbjct: 402 DLADRTDRLTRRSFEVGRGSSLELVQSGAALRQAELTLVLREFELVQARLDAFL 455 >gi|307947202|ref|ZP_07662537.1| type I secretion outer membrane protein [Roseibium sp. TrichSKD4] gi|307770866|gb|EFO30092.1| type I secretion outer membrane protein [Roseibium sp. TrichSKD4] Length = 461 Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 12/174 (6%) Query: 281 QEKKLADS-VAKIGIAKSDLYPSLSLNGSIALTHDNSFP-GYNTHWSFGPKLYLPIFDKG 338 Q + L D+ V I + +L P+++L+GS++ + S G + + S ++ +PI+ G Sbjct: 257 QSQHLVDAAVYNIKTIEGELLPTVTLDGSVSRNWEPSANVGTSNNASIFGRVNIPIYQGG 316 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKE-----VENALTSINEDKKIVTKLQHAVELH 393 + S +R+A+ Q + L+ I++ V +A + + + AVE Sbjct: 317 GVSSRVRQAK-----QELGQARLQLDVIRDQVRANVISAWGNYQAAGASIEAARAAVEAS 371 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 K ++ + R G+ + LD+LD +R V+L A+R S L +IG Sbjct: 372 KLALEGVIEEQRVGQRTTLDVLDAQRELVNQRVNLVTAQRNRIVSGYQLVSSIG 425 >gi|237712647|ref|ZP_04543128.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237723588|ref|ZP_04554069.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752332|ref|ZP_06088125.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229438041|gb|EEO48118.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453968|gb|EEO59689.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263237124|gb|EEZ22594.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 438 Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust. Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 20/246 (8%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL +A ++ AK ++ + +Y+ +E +AH ++L ++ +EL F G Sbjct: 118 NLKAAIEDLNKAKEDISISVTSAYLQILFNEELAKVAHNQVELSREQLELKEAYFKNGKA 177 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S+ + + + E + ++++ + +S LL P + + + + L Sbjct: 178 SEAEVYEARTRVAQDEMSAVQADNNYQLALLELSQLLELPTPDGFGVVSPRVEDNFTLLS 237 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN----- 315 +P + I A + N+P I+ + +L + I IA+S YP L+ I + N Sbjct: 238 LPED--IYAQAVLNKPSIKAAQFRLEGAAKSIRIAQSSWYPQLNFGAGIGTNYYNISGVE 295 Query: 316 --SFPG-----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW--QETVLNAI 366 SF +N + F L +P+F++ ++ ++ A Q ++W +E+ Sbjct: 296 NASFSSQWHQNFNKYLQFS--LSIPLFNRFDTRNKVKNAR--IQRTALSWKLEESKKALF 351 Query: 367 KEVENA 372 KE++ A Sbjct: 352 KEIQQA 357 >gi|83593133|ref|YP_426885.1| Type I secretion outer membrane protein, TolC [Rhodospirillum rubrum ATCC 11170] gi|83576047|gb|ABC22598.1| Type I secretion outer membrane protein, TolC [Rhodospirillum rubrum ATCC 11170] Length = 538 Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 2/161 (1%) Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPG-YNTH-WSFGPKLYLPIFDKGKIKSNIRRA 347 A I + L P+L+ S + +H+ S Y+T + G L +P++ G + S IR A Sbjct: 312 AAIRDQRGKLLPTLNAEVSYSFSHNPSATTEYDTKTFQAGLNLTVPLYQGGAVYSQIRDA 371 Query: 348 ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQG 407 + A ++ + E I+ + +A ++ + V+ + +E ++ + G Sbjct: 372 KHRAGQRRLQVDEQREAVIESLTSAWETLTSARARVSSYKSQIEAAGIALDGVQREAQVG 431 Query: 408 RYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++LD+LD E+ V+L A+R A S ++ A+G+ Sbjct: 432 SRTVLDVLDAEQELLTSRVNLVRAERDSAISTYEVLAALGA 472 >gi|53803834|ref|YP_114536.1| outer membrane efflux protein [Methylococcus capsulatus str. Bath] gi|53757595|gb|AAU91886.1| outer membrane efflux protein [Methylococcus capsulatus str. Bath] Length = 437 Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust. Identities = 79/407 (19%), Positives = 159/407 (39%), Gaps = 23/407 (5%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI-SHRFIPN 111 W + ++++ + +NL+IL A + A+ V A P+ SI + PN Sbjct: 42 WAGVEPLTESQVIGLFYARNLSILSAELGLETAQAQ--KVIAAAIPNPELSIYQQEWAPN 99 Query: 112 LKTNSTG--------QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIP 162 G QL I+ G+RR +E+SL + +++ + L Sbjct: 100 YPIWQNGPATYVAVSQL-----IETAGKRRLRMENSLLGEQAVESELRDVIRTLTQALRR 154 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y +E + A + ++ +E+ +F G S+ L +++ E +SDI + Sbjct: 155 AYYGLLLAQETMDAAVEQSHHVQRLVEVQQKRFEVGDISERDLTRIKIEALKAQSDIDKI 214 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 ++ L +P ++ Q + + + + + RPD+ + Sbjct: 215 AAQLVAARSQLAVFLAWPDDAGSLSVKDQWPDGKSFEDLKDEMAAVNAALERRPDLLAAK 274 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKS 342 + A + I +AK+ P + + A N T G + LP+F + + Sbjct: 275 TRYAQAKQGIDLAKAQRIPDIKVTAGFAHDLGNYIQNGAT---LGLSIPLPLFYRQE--G 329 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM- 401 I +A A + + ++T + EV A + +V + + + K + S Sbjct: 330 EIAQAGIRANDNELRVRQTEVAVRSEVNTAFAAWISANTVVKRFETEIMQKAKHIRDSAE 389 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 I Y G ++D++ +R +D A+ A +Y DL +AIG+ Sbjct: 390 IAYTNGSTDIIDLIQAQRDYRNTIMDYYQAQANRAYAYADLKMAIGA 436 >gi|329850464|ref|ZP_08265309.1| type I secretion outer membrane protein, TolC family protein [Asticcacaulis biprosthecum C19] gi|328840779|gb|EGF90350.1| type I secretion outer membrane protein, TolC family protein [Asticcacaulis biprosthecum C19] Length = 483 Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust. Identities = 79/396 (19%), Positives = 159/396 (40%), Gaps = 39/396 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIP-N 111 SLN+ + A QN T+ +A AA E + R++ PS +Y F P N Sbjct: 44 SLNEAIAQAYNQNPTLARARAAQRAADERYVQTRSEFGPSLSVGGSVNYTDTDTSFQPGN 103 Query: 112 LKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHF 170 ++N++ + +D I G + +S AN+ + + + V+ +I Y R Sbjct: 104 QRSNTSLSVSADQNIFTSGGLTNSLRASEANIRAGQQDLRSTESQVLLDVIQVYTAVRRD 163 Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 ++ + I+ D+ K+ +E + +F G ++ + + +A + + + + + + Sbjct: 164 QQALKISQDNYDILKQQLEQTQAQFDAGQLTRTDVAQSQARLSASAASLAQAQAQLDADR 223 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEK 283 ++G P+ G+PAD RN PD+ Q Sbjct: 224 AQYVAIVGQAPIGLEAE--------------PVLPGLPADFNTALQTAERNNPDL--QAS 267 Query: 284 KLADSVAK--IGIAKSDLYPSLSLNGSI--ALTHDNSFPGYNTHWSFGPKLY--LPIFDK 337 A+ AK +G A+S P++SL G++ T + G+ L +P+F Sbjct: 268 LYAEDAAKANLGAARSVFGPTVSL-GAVYSGTTPTDDLGGFGDAAGATATLRFNVPLFSA 326 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G S +R A + Q I+ + T + V A + + + V+ Q V + + Sbjct: 327 GLNGSRVREAAENYNAQKISTEITRRAVVSSVSQAWSQMIAARSAVSSNQEQVRAAQVAA 386 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + G + +++L+ ++ ++ L A+R Sbjct: 387 EGVKTEQQVGLRTNIEVLNAQQELKSAQLQLLEAER 422 >gi|197284184|ref|YP_002150056.1| type I secretion outer membrane protein [Proteus mirabilis HI4320] gi|194681671|emb|CAR40747.1| type I secretion outer membrane protein [Proteus mirabilis HI4320] Length = 450 Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust. Identities = 48/281 (17%), Positives = 122/281 (43%), Gaps = 4/281 (1%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I +LI +YI + ++++ + ++Y+K + S F G +K + ++E + Sbjct: 140 LIIRLIDNYIQVAYTQDKLLLNQAQQEIYQKQLASSQRLFELGEGTKTDIAEIETRLYLT 199 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIRN 274 +S L+ + +S ++G H + F P + + I+N Sbjct: 200 QSQYTDLQLEIEKAKNKLSAMIGSQLPTHEHIAKLTDTKFVLQSLAPDDYSTWEKNAIQN 259 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPKLY 331 I+ ++A + +I + + +P++ + + ++ +S N + + G + Sbjct: 260 NLKIQSARHEMAIAKQEIEKNRGEFFPTVQFYAAYSSSNSDSNNTINQKYQSANVGFYVS 319 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+F+ GK +++R++ + Q + N ++E+ + + + AV Sbjct: 320 MPLFNGGKTTASMRQSTAKYQMSAFERDAIIQNIMQELRYQYQICSTSHIKLMAFEQAVS 379 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 K ++ + +Y G+ +++D+L+ E + + DL AK Sbjct: 380 SAKLQLNATRKSYIGGQRTMVDVLNAEELLYRAQQDLIKAK 420 >gi|144899873|emb|CAM76737.1| Outer membrane efflux protein [Magnetospirillum gryphiswaldense MSR-1] Length = 453 Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust. Identities = 51/269 (18%), Positives = 114/269 (42%), Gaps = 14/269 (5%) Query: 183 LYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 + ++ +E + +F G ++ + + EA + +D E + + + T++G PA Sbjct: 157 VLRRQLEAAQERFRVGEITRTDVSQAEARLAGAIADRAAAEGALQNSRAKFITVVGRPAE 216 Query: 243 EFLHYMQKQSNNFQPNLYIPINIG-IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + Q + +P + + + + P + Y + + I + +L P Sbjct: 217 KPAAPKQA--------VAVPGSFDEVKSTTLAKNPSVIYSDWTAEAAKHDIDLKFGELLP 268 Query: 302 SLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 +SL G + H+ S G T KL +PI++ G + S +R + + + I + Sbjct: 269 EVSLVGEASRGHNTSQQGNETETLEAALKLSVPIYEAGDVYSQVRETKHTYGRRKIEADK 328 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI--NYRQGRYSLLDILDIE 418 +A++ A + ++ + L+ +L ++L+ + + G ++LD+L+ E Sbjct: 329 ARRDALESATKAWEDLASNRSKIRSLE--AQLRASELALAGVEEEAKVGSRTVLDVLNAE 386 Query: 419 RATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 + V+L A+R S L A+G Sbjct: 387 QELFTARVNLVRAQRDETVSAYTLKSALG 415 >gi|16125567|ref|NP_420131.1| outer membrane protein TolC [Caulobacter crescentus CB15] gi|13422661|gb|AAK23299.1| outer membrane protein TolC, putative [Caulobacter crescentus CB15] Length = 483 Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust. Identities = 92/453 (20%), Positives = 185/453 (40%), Gaps = 80/453 (17%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L A C+ G LL FSI N++ L + + +A Q N Sbjct: 11 LLAAACSAG---------LLAGSFSIANAETLADA-----------------IALAYQTN 44 Query: 73 LTILQ--ATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKID--- 127 T+ Q A+ RI E ++ + P+ A+ I TN +D K+ Sbjct: 45 PTLQQQRASARIT--DEGVVQAKTGFRPTVGATAD---ITGANTNPA-SAGADVKLSGSS 98 Query: 128 --------LF-GQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L+ G R S A D SA + + V+ ++ +Y+D R +ER+ I Sbjct: 99 AALSIIQPLYTGGRASAGVSAAEADVLSAREGLRAVEQGVLVSVVQAYVDVRRDQERLRI 158 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + + ++ +E S+ +F G ++ + + +A + S ++ + + ++ + + + Sbjct: 159 AKENVAVLQRQLEESNARFDVGEITRTDVAQSQARLASAKASLSGAQAQLEVSRASYAAV 218 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY--IPINIGIPADLIR-NRPDIRYQEKKLADSVAKIG 293 +G E +P+L +P ++ + + N P + + + A++ Sbjct: 219 VGQTPGELAP---------EPSLAGLLPASVDQAFEAAQTNNPGVTSAKFNEEAAAARVA 269 Query: 294 IAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +AK+ P++S S+ + F Y+ S +P+F G S +R A Sbjct: 270 VAKAGYRPTVSARASLGYDATRRSGVGSQFDDYSRTVSGAITASIPLFAGGLTTSQVRAA 329 Query: 348 ---ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ES+A+ + T AI++V NA +++ + + A E ++ ++ Sbjct: 330 NERESAARSAVEGAKRT---AIQQVSNAWSNLLASRAGLV----ANEEQVRATRIAFEGV 382 Query: 405 RQ----GRYSLLDILDIERATAKVEVDLSIAKR 433 RQ G + LD+L+ + + E+ L A+R Sbjct: 383 RQEQQVGLRTTLDVLNAQLELSNAELALVSARR 415 >gi|3493599|gb|AAC33452.1| ZapD [Proteus mirabilis] Length = 449 Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust. Identities = 48/281 (17%), Positives = 122/281 (43%), Gaps = 4/281 (1%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I +LI +YI + ++++ + ++Y+K + S F G +K + ++E + Sbjct: 139 LIIRLIDNYIQVAYTQDKLLLNQAQQEIYQKQLASSQRLFELGEGTKTDIAEIETRLYLT 198 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGI-PADLIRN 274 +S L+ + +S ++G H + F P + + I+N Sbjct: 199 QSQYTDLQLEIEKAKNKLSAMIGSQLPTHEHIAKLTDTKFVLQSLAPDDYSTWEKNAIQN 258 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPKLY 331 I+ ++A + +I + + +P++ + + ++ +S N + + G + Sbjct: 259 NLKIQSARHEMAIAKQEIEKNRGEFFPTVQFYAAYSSSNSSSNNTINQKYQSANVGFYVS 318 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +P+F+ GK +++R++ + Q + N ++E+ + + + AV Sbjct: 319 MPLFNGGKTTASMRQSTAKYQMSAFERDAIIQNIMQELRYQYQICSTSHIKLMAFEQAVS 378 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 K ++ + +Y G+ +++D+L+ E + + DL AK Sbjct: 379 SAKLQLNATRKSYIGGQRTMVDVLNAEELLYRAQQDLIKAK 419 >gi|327313420|ref|YP_004328857.1| outer membrane efflux protein [Prevotella denticola F0289] gi|326946163|gb|AEA22048.1| outer membrane efflux protein [Prevotella denticola F0289] Length = 501 Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust. Identities = 60/298 (20%), Positives = 128/298 (42%), Gaps = 50/298 (16%) Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK-SI 215 + K+I + + R ++ +A DL +I+ S + T+ A +L ++L+ +I+ S Sbjct: 234 VKKMIQAGVATRADGLKVDVAVNTADLQIAHIQ-SGVSLTKMALCELCGLELDGDIRLSD 292 Query: 216 ESD---IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E D PT F + S +++ + +P L L+ Sbjct: 293 EGDADLTPTPSAQFEVRDTTGSD-------------SRETADVRPELR----------LL 329 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLY-PSLSLNGSIALTHDNSFPGYNTH----WSFG 327 +N D+ Q KL S LY P + L G +L++ N F G+ W+ G Sbjct: 330 QNAIDMSRQNTKLVRS----------LYLPHVLLTGGYSLSNPNLFNGFQKRFTDLWNIG 379 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + +PI++ G+ K +R ++++ + + EVE + + K + Sbjct: 380 ITVQVPIWNWGEGKYKVRASKTATSIAQLEMDDARKKIDLEVEQNRLRLKDASKQLATAH 439 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKV-----EVDLSIAKRQLAKS 438 +E ++++ + I +++G ++ D++ + A TA+ E+++ +A+ L K+ Sbjct: 440 KNMEAAEENLRCANIGFKEGVMTVTDVMTAQTAWQTARTAIIDAEINVKLAQTGLQKA 497 >gi|218699252|ref|YP_002406881.1| multidrug resistance outer membrane protein MdtQ [Escherichia coli IAI39] gi|218369238|emb|CAR16995.1| conserved hypothetical protein; putative outer membrane protein [Escherichia coli IAI39] Length = 362 Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust. Identities = 65/354 (18%), Positives = 142/354 (40%), Gaps = 35/354 (9%) Query: 114 TNSTGQLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172 TN T L + W +D++G+ R + + L + + A+ + + + + Y + + Sbjct: 25 TNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAA 84 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ QI I + G TS ++ +E+DI R +++ Sbjct: 85 LNTVLQQIEKEQNTIIATDRQLYQNGITSS---------VEGVETDINA--SKTRQQLND 133 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPN--------LYIPINIGIPADLIRNRPDIRYQEKK 284 ++ + Q+ + N +P +G L+ R D++ Sbjct: 134 VAGKMKIIEARLSALTNHQTKALKLNPVALPKVASQLPDELGY--SLLARRADLQAAHWY 191 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 + S++ I AK+ YP ++L + AL + F L LPIFD G++ Sbjct: 192 VESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLN 251 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 +N+ A++ + ++ + V+ A+ +V A + + + + K QH ++ +L + Sbjct: 252 ANLDIAKAESNLSIASYNKAVVEAVNDVARAASQV---QTLAEKNQHQAQIEHD--ALRV 306 Query: 402 INYRQGRYSLLDILDIERATAKV-----EVDLSIAKRQLAKSYVDLYIAIGSGY 450 + Q R++ I + A++ + + + Q + + L A+G GY Sbjct: 307 VGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGY 360 >gi|315500121|ref|YP_004088924.1| type i secretion outer membrane protein, tolc family [Asticcacaulis excentricus CB 48] gi|315418133|gb|ADU14773.1| type I secretion outer membrane protein, TolC family [Asticcacaulis excentricus CB 48] Length = 480 Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust. Identities = 75/398 (18%), Positives = 166/398 (41%), Gaps = 25/398 (6%) Query: 49 TLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISH 106 TL +F + SL + +A N T+ +A + + E + R+ L P S+ AS+ + Sbjct: 29 TLGAGSAFAE-SLTDAITLAYANNPTLQRARAQQRSTDETYVQARSGLGPTLSAGASVDY 87 Query: 107 RFIP-NLKTNSTGQLDSDWKIDLF---GQRRHIESSLANLDSAYAQVDIAKLNVISKLIP 162 +P + S+ L+ LF G ++++ A++++ + + V+S +I Sbjct: 88 SDVPTGVAGRSSTGLNLSANQTLFASGGLSSGVKAAEADVNAGREDLRAVEAQVLSDVIS 147 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 Y R +E + I + ++ K+ ++ + +F G ++ + + EA + + + + Sbjct: 148 VYTAVRRDQEALRIGEENYNVLKRQLDETKARFEAGELTRTDVAQSEARLAASSASLAQA 207 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIPINIGIPADLIR-NRPDIRY 280 + ++G T + P L +P+ D N P + Sbjct: 208 RAQLDSSRAQYVAIVGQTPTAL---------DPVPGLPNLPVTFDAALDRAEANNPSLSA 258 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL--YLPIFDK 337 + A + A++ +AKS L P ++L A + S F + + L +P+F Sbjct: 259 AKWAEAAARARVSLAKSGLGPRVTLGAGYATSAPTSDFKDLDKRDAATATLRFTMPLFSA 318 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 G S +R+A Q I+ + N ++ V A ++ + Q ++ ++ Sbjct: 319 GYNSSRLRQATEGYTAQKISVELARRNVVQNVSTAWANMAAARTATQANQE--QVRAATV 376 Query: 398 SLSMINYRQ--GRYSLLDILDIERATAKVEVDLSIAKR 433 + + Y Q G + +++L+ E+ + ++ L A+R Sbjct: 377 AAEGVKYEQQVGLRTNIEVLNAEQELRQAQLALINAQR 414 >gi|189459821|ref|ZP_03008606.1| hypothetical protein BACCOP_00451 [Bacteroides coprocola DSM 17136] gi|189433431|gb|EDV02416.1| hypothetical protein BACCOP_00451 [Bacteroides coprocola DSM 17136] Length = 452 Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 22/273 (8%) Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + S ANL A + A+ N + +YIDA ++ +A Q L + + Sbjct: 117 QVRKSKANLLLGKAALQEARDNTALETFQAYIDALYYYGTTRLAKQKLAESDSLLYKTRR 176 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL---HYMQK 250 + T G + ++EA+ S ++ + + + + + +P E L + + Sbjct: 177 QETLGLKGMADVAQMEAQQASDAYNLTHQQNLYETAMLTLKQKMNFPIEEALLLDTCLLE 236 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 QS Q L I + + P ++ E + + I+ S PS+SL G I+ Sbjct: 237 QSTLEQEQLTIEHADNVFRLALNCNPVLKQAEMQKQSANMDRKISWSSFVPSISLYGGIS 296 Query: 311 LT-----HDNSFPGYNTHWS------FGPKLYLPIFDKGKIKSNIRRAESS---AQEQYI 356 + H +P ++T + FG + +PIF++ +N+R+A ++ A EQY Sbjct: 297 SSYYKELHQTGYPPFHTQFENNFGSYFGISMSIPIFNRLSGIANMRQARNNYRIATEQYE 356 Query: 357 TWQET----VLNAIKEVENAL-TSINEDKKIVT 384 +E V A+++ E L SI +KK+ + Sbjct: 357 AQKEELQKLVQQAVQDREGYLKESIQMEKKVAS 389 >gi|332664248|ref|YP_004447036.1| outer membrane efflux protein [Haliscomenobacter hydrossis DSM 1100] gi|332333062|gb|AEE50163.1| outer membrane efflux protein [Haliscomenobacter hydrossis DSM 1100] Length = 436 Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust. Identities = 68/374 (18%), Positives = 156/374 (41%), Gaps = 70/374 (18%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 SL++ ++IAL+ NL I + +++ A+ ++ RA P +S F N + Sbjct: 25 SLDECMRIALENNLQIKNSGYQLDLAEVSLRQTRAQQLPD----LSFNFGQNFNFGRSVD 80 Query: 120 LDSDWKIDL------------------FGQRRHIESSLANLDSAYAQVDIAKLNVISKLI 161 ++++ +ID FG + + + + V+ ++ + +I Sbjct: 81 INTNQRIDEVFISNGYGLNLSVPIFSGFGLKYQGQQLKQAIQAGIKDVETSRNLIRRNII 140 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 Y++A +E +A + + ++ IEL+ + + G +++ + +L+A++ + E + + Sbjct: 141 TFYLNALANQELYRVAQEQANATRQQIELAQKRVSAGVANEIVVYELKAQLANEEFNAVS 200 Query: 222 LEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN------- 274 + + N+ + P +Q +N Q +G PA+ + + Sbjct: 201 ARNNAELAKVNLFQQMNQPVD---LAVQLDANLIQT-------LGSPAEALSSPALVQKA 250 Query: 275 ---RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGY--------NT 322 P+I+ + ++ + + A+S+ +PS++ G+ A Y N Sbjct: 251 EASLPEIQGAQLRILSAQKGVEAARSNFFPSINFQGNYGAFFTSTRTEAYFSQLDATRNG 310 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 S G L LP+F G I+ ++RA + + N + +V+N L S Sbjct: 311 SMSIG--LSLPLFRGGAIQQQVQRA--------VINESMAENDLADVKNQLRS------- 353 Query: 383 VTKLQHAVELHKKS 396 +++ AV+ H+ + Sbjct: 354 --EVEQAVQNHRAT 365 >gi|45504766|gb|AAS66856.1| CusC [Sodalis glossinidius] Length = 141 Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Query: 93 RADLFPS-SYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVD 150 RADL+PS + + S+R T ++ + W++DL+G+ RH +E + A+ ++ A++ Sbjct: 20 RADLYPSVTGTASSNRSGNRSATTNSHSATASWELDLWGKLRHTLEENRASAQASEAELA 79 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 L+ S L Y R +++++ Q + Y++ + + +K+ G+ + Sbjct: 80 NITLSAQSTLAQDYFQLRVMDQQLALYQQSITAYERYVRIIGIKYQAGSEGR 131 >gi|251771439|gb|EES52018.1| outer membrane efflux protein [Leptospirillum ferrodiazotrophum] Length = 336 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 13/175 (7%) Query: 275 RPDIR-YQEKKLAD-SVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 RPD++ E+ LA V K A+ +P++ G+ +L D+ F +WS G L + Sbjct: 151 RPDLQTLTEQALAQKQVVKFNQAQ--FFPTVQTVGAYSL--DSEFFPLVYNWSVGTTLTV 206 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 PIF+ + ++A + ++ ++ I EV + + +I ++ V V+ Sbjct: 207 PIFNGFQFVHQTQQARAQMRQMLFQREDLRQQTIVEVRSDILNIRTYRQKVAADTEIVDQ 266 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++++ L+ +R G + + + ER DL+ A+ L + DL IA+ Sbjct: 267 ARQNLYLAENQFRVGTGTSVAVTQAER-------DLASARANLVRDRADLSIAVA 314 >gi|325856624|ref|ZP_08172262.1| outer membrane efflux protein [Prevotella denticola CRIS 18C-A] gi|325483338|gb|EGC86313.1| outer membrane efflux protein [Prevotella denticola CRIS 18C-A] Length = 501 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 60/298 (20%), Positives = 127/298 (42%), Gaps = 50/298 (16%) Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK-SI 215 + K+I + + R ++ +A DL +I+ S + T+ A +L ++L+ +I+ S Sbjct: 234 VKKMIQAGVATRADGLKVDVAVNTADLQIAHIQ-SGVSLTKMALCELCGLELDGDIRLSD 292 Query: 216 ESD---IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI 272 E D PT F + S +++ + +P L L+ Sbjct: 293 EGDADLTPTPSAQFEVRDTTGSD-------------SRETADVRPELR----------LL 329 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLY-PSLSLNGSIALTHDNSFPGYNTH----WSFG 327 +N D+ Q KL S LY P + L G +L++ N F G+ W+ G Sbjct: 330 QNAIDMSRQNTKLVRS----------LYLPHVLLTGGYSLSNPNLFNGFQKRFTDLWNIG 379 Query: 328 PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 +PI++ G+ K +R ++++ + + EVE + + K + Sbjct: 380 ITFQVPIWNWGEGKYKVRASKTATSIAQLEMDDARKKIDLEVEQNRLRLKDASKQLATAH 439 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIERA--TAK-----VEVDLSIAKRQLAKS 438 +E ++++ + I +++G ++ D++ + A TA+ E+++ +A+ L K+ Sbjct: 440 KNMEAAEENLRCANIGFKEGVMTVTDVMTAQTAWQTARTAIIDAEINVKLAQTGLQKA 497 >gi|282858781|ref|ZP_06267928.1| outer membrane efflux protein [Prevotella bivia JCVIHMP010] gi|282588435|gb|EFB93593.1| outer membrane efflux protein [Prevotella bivia JCVIHMP010] Length = 498 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 35/166 (21%), Positives = 78/166 (46%), Gaps = 7/166 (4%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH----WSFGPKL 330 RP++R + + S + +S P + L G ++ + N F G+ W+ G + Sbjct: 318 RPELRLLQSAIDLSKQNTKLVRSLYLPHVLLTGGYSVMNPNLFNGFQNKFSDLWNIGIAV 377 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 ++PI++ G+ K +R A+++ + Q+ E+ + + +K + Q + Sbjct: 378 HVPIWNWGEGKYKVRAAKTATSIATLELQDAQQKINLEIHQNRFRLKDAQKQLATAQKNM 437 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERA--TAKVE-VDLSIAKR 433 + ++++ + I +++G ++ DI+ + TAK VD IA R Sbjct: 438 QAAEENLRCANIGFKEGVMTVTDIMTAQTVWQTAKTAIVDAEIAVR 483 >gi|239502544|ref|ZP_04661854.1| Outer membrane protein tolC precursor [Acinetobacter baumannii AB900] Length = 442 Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust. Identities = 52/261 (19%), Positives = 116/261 (44%), Gaps = 36/261 (13%) Query: 105 SHRFIPNLKTNSTG---QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKL 160 SH P + N G QL +D+ I G+ R I+ + + L + + + + I Sbjct: 87 SHVLFPT-EGNRKGRSLQLQADYPIYTSGRHRLGIDIAESQLSAQHQGLSDQRSETILNT 145 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 + Y D K + + + + ++++ S +F G ++ L ++ A++ ++DI Sbjct: 146 VMVYTDVLKKKAILELRQKTMANLQRSLYESKRRFDVGMITRADLAQVLAQVAQGQADIT 205 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI--GIPADL------I 272 + + ++ + G P+ +PIN IPA+L Sbjct: 206 QAQSNLTVSEAQFYQVTGTT----------------PDNLVPINQLPTIPANLDEILAQT 249 Query: 273 RNRPDI---RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGP 328 +N P + +Y EK+ A+ + + K +L+P++ L + S+ G ++ + G Sbjct: 250 KNHPALMRAKY-EKQAAEK--QYALTKRELWPTVMLTSRAGKQDEASYIGSESNNYMVGV 306 Query: 329 KLYLPIFDKGKIKSNIRRAES 349 +L +P++D G ++N+++A++ Sbjct: 307 QLNVPLYDDGLNRANVKKAQA 327 >gi|261855762|ref|YP_003263045.1| outer membrane efflux protein [Halothiobacillus neapolitanus c2] gi|261836231|gb|ACX95998.1| outer membrane efflux protein [Halothiobacillus neapolitanus c2] Length = 515 Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 4/147 (2%) Query: 301 PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 P S N +L H PG++ ++ KL +PI++ GKI RAE+ + + Sbjct: 131 PGASSNPPDSLNH----PGWHHNFQTSLKLSVPIYNGGKISGMKSRAEALLRAAQSGDRA 186 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 I +V A I+ V Q AVE K LS Y QG S D+L E Sbjct: 187 AKQQLILQVVTAYAGIDAAHAFVKVTQQAVEAAKSYRDLSNKMYLQGVVSKSDLLKSEVN 246 Query: 421 TAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +++ A QLA + L I +G Sbjct: 247 LGDIQLRHQQALDQLADAKDGLRIVMG 273 >gi|237722845|ref|ZP_04553326.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447367|gb|EEO53158.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 448 Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 144/316 (45%), Gaps = 34/316 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 35 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 94 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ A+ ++ + +Y Sbjct: 95 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAREDIAINVTSAY 153 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E IAH +DL K +L ++ QG S EA+ + + ++ ++ Sbjct: 154 LQVLFNQELSKIAHNQVDLSKD--QLKRIQGLQGVGKASSSEVAEAQARVAQDEMTAVQS 211 Query: 225 --SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ Sbjct: 212 DNTYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LTYKPSIKAA 268 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLY 331 E +L S+ I IA+S YP LS + + + ++SF N + G L Sbjct: 269 EYRLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSESSFGSQMKNNLNKYIGFNLS 328 Query: 332 LPIFDKGKIKSNIRRA 347 +PIF++ ++ +R A Sbjct: 329 VPIFNRFATRNRVRTA 344 >gi|160883616|ref|ZP_02064619.1| hypothetical protein BACOVA_01588 [Bacteroides ovatus ATCC 8483] gi|156111029|gb|EDO12774.1| hypothetical protein BACOVA_01588 [Bacteroides ovatus ATCC 8483] Length = 445 Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 144/316 (45%), Gaps = 34/316 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 32 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 91 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ A+ ++ + +Y Sbjct: 92 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAREDIAINVTSAY 150 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E IAH +DL K +L ++ QG S EA+ + + ++ ++ Sbjct: 151 LQVLFNQELSKIAHNQVDLSKD--QLKRIQGLQGVGKASSSEVAEAQARVAQDEMTAVQS 208 Query: 225 --SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ Sbjct: 209 DNTYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LTYKPSIKAA 265 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLY 331 E +L S+ I IA+S YP LS + + + ++SF N + G L Sbjct: 266 EYRLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSESSFGSQMKNNLNKYIGFNLS 325 Query: 332 LPIFDKGKIKSNIRRA 347 +PIF++ ++ +R A Sbjct: 326 VPIFNRFATRNRVRTA 341 >gi|329961323|ref|ZP_08299469.1| outer membrane efflux protein [Bacteroides fluxus YIT 12057] gi|328531929|gb|EGF58749.1| outer membrane efflux protein [Bacteroides fluxus YIT 12057] Length = 431 Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 24/186 (12%) Query: 274 NRPD--IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP--- 328 NRP+ I + K+A+S +++ +K + ++GS S PGY+ P Sbjct: 254 NRPELMIAHDRIKMAESTSRLNDSKYKPQLYIGIDGSY------SSPGYDFRTDMDPNYA 307 Query: 329 ---KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDK 380 KL +PIF+ GK RR E A I LN + EV+ A TS+ + Sbjct: 308 VYAKLSVPIFEWGK-----RRNEKRASTWKIGMANDYLNKVTDNIKLEVQTAKTSLAQSM 362 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + V +++E +++ ++ Y +G+ S++++++ + +++ AK Y Sbjct: 363 QQVCLTGNSLEKARENERKALERYEEGKISIVEVIEAQNYRQSSQINYVQAKVSAQGHYS 422 Query: 441 DLYIAI 446 +L A+ Sbjct: 423 ELIKAL 428 >gi|87301765|ref|ZP_01084599.1| possible RND family outer membrane efflux protein [Synechococcus sp. WH 5701] gi|87283333|gb|EAQ75288.1| possible RND family outer membrane efflux protein [Synechococcus sp. WH 5701] Length = 565 Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 9/125 (7%) Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 GS DNS G N W+ +FD G+ + R+ + +A+EQ + + Sbjct: 383 GSYTYGADNSV-GLNLRWN--------LFDGGRAAAQFRQQKQAAEEQRFNFADRRDQIR 433 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 EVE + + ++ + +T AV ++++ L+ + ++ G + +++D +R + EV Sbjct: 434 LEVETSFYQLLQNNRDITTTSRAVISSREALRLARLRFQAGVTTQREVVDSQRDLTQAEV 493 Query: 427 DLSIA 431 + A Sbjct: 494 SYARA 498 >gi|255533587|ref|YP_003093959.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] gi|255346571|gb|ACU05897.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] Length = 447 Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 32/166 (19%) Query: 297 SDLYPSLSLNGSIA----------LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 S+ YPSL+L G+ L+ +N+ G+ + + G L +PIF+ +S IR+ Sbjct: 281 SEYYPSLALTGNYTYSSQSGSFDFLSSNNTAIGFGSS-AVGLTLKVPIFNGFLTRSKIRQ 339 Query: 347 AESSAQEQYITWQETV-------LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399 A+ ++ +E+ NA ++ N+L +IN KK + A E+++ + + Sbjct: 340 ADIDIKKAREDRRESTNSLNLAYENAKIQLRNSLNTINAQKK---NAELADEIYRSTQN- 395 Query: 400 SMINYRQGRYSLLDILDIERATAKVE-------VDLSIAKRQLAKS 438 NY G +L D+LD E A + + ++ IA+ QL KS Sbjct: 396 ---NYNNGLANLTDLLDTENALTEAQNSYTQALLNYKIAEIQLIKS 438 >gi|223936311|ref|ZP_03628224.1| outer membrane efflux protein [bacterium Ellin514] gi|223895173|gb|EEF61621.1| outer membrane efflux protein [bacterium Ellin514] Length = 442 Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust. Identities = 78/370 (21%), Positives = 163/370 (44%), Gaps = 22/370 (5%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-SYASISHRFI---PNLKTN 115 S+ ++V L N ++ A R A +E I RA P + + RF+ PN T+ Sbjct: 38 SIEQVVSQVLSNNPSLKAAHARWEAMQERIPQARAWQDPRVGVDATAGRFVSVPPNSFTD 97 Query: 116 STGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK--LNVISKLIPSYIDARHFKER 173 + ++ + L G R +++ +A D A A D + L++I++ ++ + ++ Sbjct: 98 Y--KYAAEQTLPLAGINR-LQTKIAETDVASALADSTRKELDLIARAKTAFYRLANAYKQ 154 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 +++ + L K+ E++ K+ G + ++ E E+ +E + E+ + Sbjct: 155 LALNRKNAALLKQYAEITRNKYEVGNRPQSDVLNAETELGKLEENKFDFERQISEAETEL 214 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIG 293 + L+ PA L Q + F + P + A +++RP++ KK+ + A++ Sbjct: 215 NVLMNRPAHSPL--PQPANITFASTDWSPQTLNELA--LKHRPELLIAAKKIEAAQAQVE 270 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA----ES 349 IAK P SL + + N + G LP F+ K + IR ES Sbjct: 271 IAKRGWIPEPSLR--VEASQYNEASQAISEVVVGFSFNLPWFNHKKYSAAIREKQKLLES 328 Query: 350 SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRY 409 S QE ET+ +++ T + + TK+ + L +++++ + ++Y + Sbjct: 329 SEQELDSLRTETLGRLRDQLKRIETFHHHTELFHTKI---IPLAEQTVTATRLSYETDKA 385 Query: 410 SLLDILDIER 419 S L++++ +R Sbjct: 386 SFLNLIEAQR 395 >gi|192290686|ref|YP_001991291.1| outer membrane efflux protein [Rhodopseudomonas palustris TIE-1] gi|192284435|gb|ACF00816.1| outer membrane efflux protein [Rhodopseudomonas palustris TIE-1] Length = 423 Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust. Identities = 62/303 (20%), Positives = 125/303 (41%), Gaps = 15/303 (4%) Query: 127 DLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 +L+G+R I + A D+A +L V+S+ +++ + RI I + + Sbjct: 101 ELWGKRDARIAAGQAGFDAAAIGRQAVRLEVLSETAIAFVTVLGLQRRIQILDEQVQAID 160 Query: 186 KNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 + L + GA+S + E +++D + + ++ L+G A +F Sbjct: 161 RITPLLKRRVEAGASSVAETGRAEVASSLVKADRERTKSALSSARRELAILMGDSAPKFA 220 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + N +P + + I A+ P + + A A++ +A+ YP +++ Sbjct: 221 VVSGRLDVNGKPPSFHSVISAIEAN-----PQLVRWKAVYAQRNAELLLARLRPYPDVTV 275 Query: 306 NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVL 363 S L H N S + +P+FD+ G I S +A E+ +L Sbjct: 276 --SAGLRHYNETGDSAVRLSL--SVPIPVFDQNQGNILSAQETLARTAAERQGNRNTLIL 331 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 A + ++ S+ E + + A+ K + Y QGRY+LL++LD + + A+ Sbjct: 332 VAGRAYDSLQGSLRE---LAILREVAIPKSKDAADAISEGYGQGRYTLLEVLDSQASVAQ 388 Query: 424 VEV 426 + Sbjct: 389 ARL 391 >gi|255608761|ref|XP_002538954.1| Cobalt-zinc-cadmium resistance protein czcC precursor, putative [Ricinus communis] gi|223509616|gb|EEF23429.1| Cobalt-zinc-cadmium resistance protein czcC precursor, putative [Ricinus communis] Length = 278 Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 38/290 (13%) Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKL--SLVKLEAEIKSIESDIPTLEKSFRMNV 230 RI + +IL L ++N +LS + + G S L +L ++AE R + Sbjct: 1 RIEVEQRILKLIEQNTQLSRKRVSAGEDSLLDGNLAIVDAE-------------RARNQL 47 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG--IPADL----------IRNRPDI 278 +++ L T+ MQ ++N F P +G PA + RP I Sbjct: 48 ISLNEQLLRARTQLAATMQLKANEF------PEVVGELTPAQTQYTLQELFNKLDTRPGI 101 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKG 338 + K A + +++ + KS YP L++ S+ T + S G + S G + LPIF + Sbjct: 102 QSLTSKEASARSRLELQKSMRYPDLTV--SLINTTEASLAGSDNISSIGVSMPLPIFRRN 159 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH-KKSM 397 + I RA + + I NA +E A K V +L V ++++ Sbjct: 160 --ATGIGRATAELTQSEINLTSETRNAKAVIEAAWLRRENIKDRVRRLNSEVYPKLEENL 217 Query: 398 SLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +LS + G L +L ++R + D+ ++ L ++L G Sbjct: 218 TLSKKAFENGEIGLPQLLIVQRQVVDAQRDIIETQKDLRLVQIELEYVSG 267 >gi|153865247|ref|ZP_01997824.1| Outer membrane efflux protein [Beggiatoa sp. SS] gi|152145272|gb|EDN72176.1| Outer membrane efflux protein [Beggiatoa sp. SS] Length = 297 Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 25/275 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 +K++E + + + G SK+ + + + S E+ ++++ N+ LG + E Sbjct: 25 RKHLEAAQSRQSVGLVSKVDVYRAKLAALSAENVYQNQRRAYQRAFENVYEQLGIASAEP 84 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR--YQEKKLADSVAKIGI--AKSDLY 300 ++ + + +P+ IP D + PD R +Q +A ++++ + A+ DL Sbjct: 85 INMVD------EIKQMLPL---IPDDWEQAIPDARADWQAHLIALELSQLALYQARRDLL 135 Query: 301 PSLSLNGSIALTHDNSFPGYN-------THWSFGPKLYLPIFDKGKIKSNIRRAESSAQE 353 P +SLN + S + T WS +L FD K+ + R SA Sbjct: 136 PDISLN--FYMQQKGSSDAFENISRLDETDWSLQLELR-STFDLFTEKTALARENLSAAR 192 Query: 354 QYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 Q +E +A + E ++ LQ E +K++ L+ I Y +G L Sbjct: 193 LRRHSQALKRKIKREARDAFEDLTAEARRQHISLQR-FEQAEKALELAKIRYERGLSDNL 251 Query: 413 DILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 DILD E A ++ E+D+ AK + V L A+G Sbjct: 252 DILDAETALSEAELDILRAKVAYNLTAVRLAHALG 286 >gi|255533012|ref|YP_003093384.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] gi|255345996|gb|ACU05322.1| outer membrane efflux protein [Pedobacter heparinus DSM 2366] Length = 444 Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust. Identities = 62/310 (20%), Positives = 134/310 (43%), Gaps = 48/310 (15%) Query: 84 AAKENILSVRADLFPSSYASISHRFIP-NLKTNSTGQ---------LDSDWKIDLFGQRR 133 +A+++ L ++ L P Y S S F N T + G L+S W + G Sbjct: 60 SAEQDQLLAKSALLPDLYGSASQNFNHYNQATATNGNALNYSGSVGLNSSWTLYRGG--- 116 Query: 134 HIESSLANLDSAYAQVDIAKLNVISK-------LIPSYIDARHFKERISIAHQILDLYKK 186 ++++ + D + V A N++ + + +Y++ KE I ++ + Sbjct: 117 YLKTDIKQKDLS---VQAANFNILQQENDITLQITQAYLNILVDKESIIYNQDLVKTSEA 173 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 ++ + +F G+ ++ + + EA++ ++ E + R + + LL P + Sbjct: 174 QLDQAQRQFKAGSVARKVVAQFEAQLAGDRYNLNAAENAERKDKITLKQLLQLPDS---- 229 Query: 247 YMQKQSNNFQPNLYIPI-NIG----IPADLIRNRPDIRYQEKKLADSVAKIGI--AKSDL 299 K+ + +P+ + + NI + ++NRP+++ E L ++ +G+ A++ Sbjct: 230 ---KRFDIVKPDTILSVENITDLNTVQQYALQNRPEVKNAE--LGVQISDLGLSKARAGY 284 Query: 300 YPSLSLNGSIALTHDNSFPGYNTHWSF--------GPKLYLPIFDKGKIKSNIRRAESSA 351 PSL+L I ++ P YN F G L +PIF + K+N+ +A+ Sbjct: 285 LPSLTLGAGIGSSYARD-PNYNVFRQFDNNFNQQVGFTLSVPIFTNRQNKTNVAKAKIDI 343 Query: 352 QEQYITWQET 361 + +T + T Sbjct: 344 AQAKLTLENT 353 >gi|332519972|ref|ZP_08396436.1| outer membrane efflux protein [Lacinutrix algicola 5H-3-7-4] gi|332044531|gb|EGI80725.1| outer membrane efflux protein [Lacinutrix algicola 5H-3-7-4] Length = 465 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 71/341 (20%), Positives = 148/341 (43%), Gaps = 52/341 (15%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHR-----FIPN--- 111 SL + V ALQ N+T+ Q+ A+++++S + + P+ AS S FI Sbjct: 29 SLKESVDYALQNNITVRQSLLDQKLAEQDLISAKGNFLPTVNASASQNWNFGSFIDQNGS 88 Query: 112 -LKTNSTGQ-LDSDWKIDLFGQRRHI---ESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 + +S G + + LF R+ + + ++S+ Q+++ K N+ ++ +Y++ Sbjct: 89 RISRDSRGNGFGVNAGVTLFNGFRNTNLQKQAELGIESSKIQLEVLKNNISLNVVNAYLN 148 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E + A + + + +++++ GA ++ L+ ++++ S + S Sbjct: 149 ILFNREAVKQAEEQVAISQRSLDQVQELVDAGARARADLLVSKSQLASDNERLVNAVNSV 208 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +++ N+S LL PA E + + L + I + + NRP+I+ + + Sbjct: 209 DLSLLNLSQLLQLPANENFDIQDVNIDLTEAVLAYKNSNEILSYALENRPEIKGAQLNID 268 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHD----------------------------NSFP 318 ++ IA+S YP+LSL + ++ N F Sbjct: 269 NAELNYEIARSAYYPTLSLGAGASTSYQHLQGQKDVLQIVTGFDATTGEPIVEFQKNGFV 328 Query: 319 -------GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 GYN +S L +PIF+ K K++++RAE S + Sbjct: 329 EQIENNLGYNVGFS----LSIPIFNGFKTKASVKRAEISKE 365 >gi|298482278|ref|ZP_07000465.1| outer membrane efflux protein [Bacteroides sp. D22] gi|298271565|gb|EFI13139.1| outer membrane efflux protein [Bacteroides sp. D22] Length = 448 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 70/314 (22%), Positives = 140/314 (44%), Gaps = 30/314 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+T + A K ++ + + P+ S S + I N Sbjct: 35 TLRQCIDYAIEHNIEIRQSTNSVEANKVSVNTSKWTRLPNLSGSASQNWSWGRTASPIDN 94 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ AK ++ + +Y Sbjct: 95 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAKEDIAINVTSAY 153 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E +AH ++L K ++ G S + + +A + E + Sbjct: 154 LQVLFNQELSKVAHNQVNLSKDQLKRIQGLHGVGKASPSEVAEAQARVAQDEMTAVQSDN 213 Query: 225 SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ E Sbjct: 214 TYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LAYKPSIKAAEY 270 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLYLP 333 +L S+ I IA+S YP LS + + + +NSF N + G L +P Sbjct: 271 RLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSENSFGSQIKNNLNKYIGFNLSVP 330 Query: 334 IFDKGKIKSNIRRA 347 IF++ ++ +R A Sbjct: 331 IFNRFSTRNRVRTA 344 >gi|299139703|ref|ZP_07032876.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] gi|298598327|gb|EFI54492.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX8] Length = 443 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 72/388 (18%), Positives = 151/388 (38%), Gaps = 64/388 (16%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L +++ +A +N T+L AA++N+ +VRA + R P+L N T Sbjct: 59 TLAQILDLARSKNPTLL-------AAEQNLRAVRAQELQAGV-----RVNPSLTANGTDV 106 Query: 120 LDS-----------------------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV 156 + W++D R + A L+ Q ++A Sbjct: 107 TEGANAVTPYNYTVQVSRLFERGDKRRWRLD--DARATTAQTQAQLNDTIRQTNLAVKQA 164 Query: 157 ISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIE 216 + ++ + KE + +A L ++ ++++ ++ G KL +L+ ++ S+E Sbjct: 165 FTHMLIA-------KEALELASASLKDFRHEVDIASDRYKAGDLGKLDFERLDLQLGSLE 217 Query: 217 SDIPTLEKSFRMNVHNISTLLG--YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 SD + R + TL+G P +F + + P L + + N Sbjct: 218 SDESNDIVNLRQASDQLQTLIGIATPGADF-----DVTGDIIPPLVTQTQGALVQAGLDN 272 Query: 275 RPD--IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL 332 RPD A++ A++ +A P+L +D S G F + L Sbjct: 273 RPDYAAAKFAVTAAEANARLAVANGTTDPTLEAE------YDRS--GTENSAGFSVNIPL 324 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL-QHAVE 391 IFD+ + R +++ + T + + +++ A + K++ + +H ++ Sbjct: 325 RIFDRNQGNKETARFQATGSQFAQTAARNQV--VSDIDQAWIGYTQAKRLSDRFGEHYLD 382 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIER 419 +S++ + G +L+D LD R Sbjct: 383 ESHDVLSIAQYAFEHGGIALIDYLDALR 410 >gi|299147588|ref|ZP_07040652.1| putative outer membrane efflux protein [Bacteroides sp. 3_1_23] gi|298514375|gb|EFI38260.1| putative outer membrane efflux protein [Bacteroides sp. 3_1_23] Length = 445 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 144/316 (45%), Gaps = 34/316 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 32 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 91 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ A+ ++ + +Y Sbjct: 92 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAREDIAINVTSAY 150 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E IAH +DL K +L ++ QG S EA+ + + ++ ++ Sbjct: 151 LQVLFNQELSKIAHNQVDLSKD--QLKRIQGLQGVGKASSSEVAEAQARVAQDEMTAVQS 208 Query: 225 --SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ Sbjct: 209 DNTYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LTYKPSIKAA 265 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLY 331 E +L S+ I IA+S YP LS + + + ++SF N + G L Sbjct: 266 EYRLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSESSFGSQMKNNLNKYIGFNLS 325 Query: 332 LPIFDKGKIKSNIRRA 347 +PIF++ ++ +R A Sbjct: 326 VPIFNRFATRNRVRTA 341 >gi|189423609|ref|YP_001950786.1| outer membrane efflux protein [Geobacter lovleyi SZ] gi|189419868|gb|ACD94266.1| outer membrane efflux protein [Geobacter lovleyi SZ] Length = 432 Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust. Identities = 62/313 (19%), Positives = 133/313 (42%), Gaps = 48/313 (15%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASI--SHRFIP 110 W + SL+ ++ +++Q N + E + + RA L P+ + + Sbjct: 27 WAVESTLSLSHVIALSMQHNAELRALREELGVRDAGV--TRAGLLPNPTLDLEAGTGALT 84 Query: 111 NLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISK-------LIPS 163 K ++ L +I L G+R L A + D+ + ++ K + + Sbjct: 85 GSKNENSLALGLSQEIPLVGKRGK------RLSVAEQERDLYRWQLLDKERRLREEVKTA 138 Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 + DA KER+++A + + L ++ ++++ + + G +L + ++ E+ E Sbjct: 139 FYDALLAKERVALADRSIALNRQLLDVTKERLSAGDIPELEMNLVKVELARSEGARIESA 198 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP-----ADLIR----N 274 K+ N + TL+G ++ +P + ++IG ADL + N Sbjct: 199 KTMLQNQARLWTLMGL------------ASGSRPEITGTLDIGTLVAGTLADLQQRANAN 246 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF------PGYNTHWSFGP 328 RPD+R + + A I +A+++ P+L+ + L D + G +T ++ G Sbjct: 247 RPDLRALKAEKKRGEADITLAQAEKIPNLT--AGLVLRRDTTSMEIAGQEGKDTAYTVGI 304 Query: 329 KLYLPI--FDKGK 339 +L +PI FD+ + Sbjct: 305 RLSIPIPLFDRNR 317 >gi|260175136|ref|ZP_05761548.1| putative outer membrane efflux protein [Bacteroides sp. D2] gi|315923370|ref|ZP_07919610.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313697245|gb|EFS34080.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 448 Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust. Identities = 71/316 (22%), Positives = 144/316 (45%), Gaps = 34/316 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+ + A K ++ + + P+ S S + I N Sbjct: 35 TLRQCIDYAIEHNIEIRQSANNVEAGKVSVNTTKWARLPNLSGSASQNWSWGRTASPIDN 94 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ A+ ++ + +Y Sbjct: 95 SYSDINSANTSFSLGTNIPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAREDIAINVTSAY 153 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E IAH +DL K +L ++ QG S EA+ + + ++ ++ Sbjct: 154 LQVLFNQELSKIAHNQVDLSKD--QLKRIQGLQGVGKASSSEVAEAQARVAQDEMTAVQS 211 Query: 225 --SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQ 281 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ Sbjct: 212 DNTYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LTYKPSIKAA 268 Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLY 331 E +L S+ I IA+S YP LS + + + ++SF N + G L Sbjct: 269 EYRLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSESSFGSQMKNNLNKYIGFNLS 328 Query: 332 LPIFDKGKIKSNIRRA 347 +PIF++ ++ +R A Sbjct: 329 VPIFNRFATRNRVRTA 344 >gi|116330036|ref|YP_799754.1| TolC family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123725|gb|ABJ74996.1| TolC family protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 518 Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust. Identities = 59/300 (19%), Positives = 133/300 (44%), Gaps = 17/300 (5%) Query: 137 SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 +LAN+ A+ + +L + ++ +Y + KE I + + +DL +K I F+ Sbjct: 203 GALANVRMNEAKYESGRLYL--EIAQAYYNVLQLKEVILLEEKKIDLVRKMILEKRRLFS 260 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G ++ L + EA+ E+++ + + + +L+G + K Sbjct: 261 LGKITRADLSRAEADFSRSEANLEDFKYQLKQAEMALESLVGVGEGGLRLSIPKGV---- 316 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS 316 + IP N+ +P + I R D+ ++ L + + A PS++LN + N+ Sbjct: 317 --ISIPQNL-LPEEKIAKRYDVIAAKENLKMAELNLKKAWGGHLPSVTLNNYYTIPEHNT 373 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 P N + + +P+ G I + +++AES+ ++ + + A E+ A S Sbjct: 374 TP--NKDITMQLSINVPLLSAGTITAGVKQAESAVRQAELQLSQAKRIATDEIRKAYESS 431 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQL 435 ++++ A+ S+ ++ + R+G +S + +E T+++ +D IA R++ Sbjct: 432 RNSARLLSLYLKAL----NSVESNLSSQRRG-FSFKTVSRLELLTSEISFLDSEIAYRKV 486 >gi|301310267|ref|ZP_07216206.1| cation efflux system protein CzcC [Bacteroides sp. 20_3] gi|300831841|gb|EFK62472.1| cation efflux system protein CzcC [Bacteroides sp. 20_3] Length = 419 Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 33/160 (20%) Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL 330 L+ RPD++ + + S A + + +S +P +S+ G T+D + N +W+ G + Sbjct: 242 LLYERPDLKLAQVSIKASEADVRLQRSLAFPEVSVKG----TYDKAGNFINDYWAIGLSV 297 Query: 331 YLPIFDK--GKIK-SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 LPIF++ G I+ + I A+ + +E+Y A + EN L + +L+ Sbjct: 298 SLPIFNRNQGNIRAAKISVAQKAHKEEY---------ARRHAENELFT------SYARLE 342 Query: 388 HAVELHK-------KSMSLSM----INYRQGRYSLLDILD 416 A++L++ K +L + +N+++ SLL+ +D Sbjct: 343 KAIQLYRSSNYGLEKDFALIIEGVNLNFQKRNISLLEFID 382 >gi|119776180|ref|YP_928920.1| outer membrane channel protein [Shewanella amazonensis SB2B] gi|119768680|gb|ABM01251.1| outer membrane protein TolC [Shewanella amazonensis SB2B] Length = 432 Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 12/159 (7%) Query: 292 IGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 I + K+ YPSLSL+ + + P Y+ S G L +PIF+ K+ S + +A+ Sbjct: 259 ISLYKAGHYPSLSLSAGYTKGFEQTPGPDYDNS-SIGVTLSIPIFEGFKVTSKVEQAQYK 317 Query: 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYS 410 E ++T +K+V N ++ + + +V + ++ + + G + Sbjct: 318 YVEASEKLEQTYRRVVKDVRNNFNNVGASISSIRAYEQSVLSSESALGATQSGFEVGTRT 377 Query: 411 LLDILDIERATAKVEVDLSIAKRQLAK---SYVDLYIAI 446 ++D+L+ R DL +KR+L+ SY+ +A+ Sbjct: 378 IVDVLNRTR-------DLYDSKRKLSDARYSYISSVLAL 409 >gi|326385475|ref|ZP_08207114.1| Outer membrane efflux protein [Novosphingobium nitrogenifigens DSM 19370] gi|326210014|gb|EGD60792.1| Outer membrane efflux protein [Novosphingobium nitrogenifigens DSM 19370] Length = 446 Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%) Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FG L +P++D+ K+ +R AE+ + + + + +E AL + V+ Sbjct: 315 FGVTLSIPLWDR-KL-GPVREAEARRSQADLRIEAETFAVRQRIEIALRQYEVAQSQVSA 372 Query: 386 LQHA-VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 LQ+ V K + ++ + Y+ G L+D+LD +R DL+ ++ +LA ++V++ Sbjct: 373 LQNGLVAQAKAAFDVAQVAYKTGERGLIDVLDAQRVYRAARADLNSSRYELAAAWVEI 430 >gi|332878611|ref|ZP_08446331.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683512|gb|EGJ56389.1| outer membrane efflux protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 444 Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 41/194 (21%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKL--- 330 NR +++ EK+ + + ++ LYPSL L + GY S GPK+ Sbjct: 255 NRIELQVLEKQKQLLDINVKVKRAALYPSLMLQATY---------GY---LSMGPKMPII 302 Query: 331 -------------------YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVEN 371 +PIF + IR+A+ +Q T ++T L EN Sbjct: 303 YGKKDKVYGADYSSITLGVSVPIFSGFGTTAKIRQAQIESQALEATLKDTHLAMDLAYEN 362 Query: 372 ALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE------ 425 A + +N + + + V+L ++ + + NY+QG SL D+LD ER+ + + Sbjct: 363 AHSQLNNNLLTIDSQKENVKLAEEVLLNTQNNYQQGLASLTDLLDAERSLSDAKNNYTNA 422 Query: 426 -VDLSIAKRQLAKS 438 +D +A+ +L KS Sbjct: 423 LLDYKLAEIELLKS 436 >gi|317485607|ref|ZP_07944483.1| TolC family type I secretion outer membrane protein [Bilophila wadsworthia 3_1_6] gi|316923144|gb|EFV44354.1| TolC family type I secretion outer membrane protein [Bilophila wadsworthia 3_1_6] Length = 458 Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust. Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 47/313 (15%) Query: 127 DLFGQRRHIESSLANLDS-AYAQVDIAKLNVISKLIPSYIDARHFKERISIAH------- 178 D F R + + A +DS Y +D A + +I +++D +E + +A Sbjct: 119 DGFATRSRVRTGEATVDSMTYRVLDNATSFALDAII-AHVDLLRRREILQLAKDNVRQHV 177 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 +ILD K+ +EL GA S + + + + +S + E S R + L G Sbjct: 178 EILDSQKERVEL-------GAGSSADVTQTKGRLARAQSTLTDAEASLREGEASYIRLTG 230 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI-----RNRPDIRYQEKKLADSVAKIG 293 P L +Y+P + D + +N P ++ + + + Sbjct: 231 KPVPASL-----------AEVYVPEPMYTGYDAVMEVADKNNPKLKAYMSDIKAARGEKE 279 Query: 294 IAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYL----PIFDKGKIKSNIRRAES 349 +A+S +P ++ + + D S PG + W+ G L +F+ G K+ AES Sbjct: 280 LAESAYHPKINFEVGPSYS-DRSGPG--SQWTSGMDAGLVMRWNLFNSGADKAGTEAAES 336 Query: 350 SAQEQYITWQETVLN----AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 + ET+ N E+EN T K+ + A+ + + + ++ Sbjct: 337 RTR----MATETLYNFHDELALEIENTWTRYLAAKEQKKYYEEAIGYNTATRDAYLEQFK 392 Query: 406 QGRYSLLDILDIE 418 G SLLD+LD E Sbjct: 393 LGERSLLDVLDAE 405 >gi|78049147|ref|YP_365322.1| outer membrane efflux protein RaxC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037577|emb|CAJ25322.1| outer membrane efflux protein RaxC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 460 Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 42/184 (22%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT------ 322 A I + P +R Q+ +++ + A++ A++ P+LSL ++ NS+ G T Sbjct: 239 ATAIADNPALRAQQLQVSAAEAQVSAARAGHLPTLSLGANVG--RSNSWGGQGTVDEAAG 296 Query: 323 ----------HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ------------- 359 S G L +PIF G +S +R+A S Q T++ Sbjct: 297 NFTTAGRDIDTDSVGITLTIPIFAGGATQSAVRQALSQRDIQQDTYEQQKRALDRNTRNA 356 Query: 360 -ETVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGR 408 +TV+ I EVE ++ + Q +E+ +++++ + +NY Q R Sbjct: 357 YQTVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSR 416 Query: 409 YSLL 412 Y+ L Sbjct: 417 YNFL 420 >gi|299770835|ref|YP_003732861.1| putative outer membrane efflux protein, type I secretion protein [Acinetobacter sp. DR1] gi|298700923|gb|ADI91488.1| putative outer membrane efflux protein, type I secretion protein [Acinetobacter sp. DR1] Length = 488 Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust. Identities = 80/411 (19%), Positives = 168/411 (40%), Gaps = 48/411 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + VKIA+Q+N I QA + I +A +P I+ +L + G+ Sbjct: 83 TLQEAVKIAIQRNPDISQAISTLAGQNAGIDYAKAGYYPQLSGGIT---TGDLTSGERGR 139 Query: 120 ----LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKL-------IPSYIDAR 168 L++ + FG+ + + +D A+V + + NV+ + S I+ + Sbjct: 140 QLLTLNATQMLYDFGKVK------SGVDVEQAKVQVEQANVLVSIDDIALDVAQSIINIQ 193 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 + + IA Q + ++ E+++L+ G +S+ ++ ++ +++ +S + + R Sbjct: 194 RYLQLNKIAEQQIAGIQRIQEIANLRANAGISSQADPIQAQSYLQAAQSGLIAQQSLLRQ 253 Query: 229 NVHNISTLLGYPATE----FLHYMQKQSNNF-QPNL-YIPINIGIPADLIRNRPDIRYQE 282 ++ TLLG + + KQS+ + +P IP I A + Sbjct: 254 YQQHLRTLLGADVSRTGWIISDDLVKQSDLYGEPEFNTIPKMIAAQASV----------- 302 Query: 283 KKLADSVAKIGIAKSDL--YPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP----IFD 336 VAK ++ L YP+LS+ GS++ + P + + L + Sbjct: 303 -----EVAKAQKEQTRLTRYPTLSVKGSLSQAINGRNPNNDKDDGLYSSVMLEASSQFYQ 357 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G + S ++ A + + L+ + ++ + I ++ + L + ++ Sbjct: 358 GGAVSSQVKMASYAEEAAKSKVNSVYLDVLDQIRTSREQIENKQRQMLVLANRQATTVRT 417 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L Y+ G SL+D+L+ E+A +L A+ + S V A G Sbjct: 418 RELYQEQYKLGTRSLVDLLNAEQAIHSANSELETARYDIYNSIVQYISATG 468 >gi|319408779|emb|CBI82436.1| Outer membrane protein [Bartonella schoenbuchensis R1] Length = 430 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 47/308 (15%) Query: 164 YIDARHFKERISIAHQILDLYKKNI-----------------ELSHLKFTQGATSKLSLV 206 ++DA + A +I DL ++N+ E +H+ F Q ++ V Sbjct: 130 FLDAVTAYANVYKARRIADLRRENLAALEEQVRSNEARLNVGEGAHVDFAQAQAARSVAV 189 Query: 207 KLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYP--ATEFLHYMQKQSNNFQPNLYIPIN 264 +E +D+ +E +R + + T L P ATE NL + Sbjct: 190 ---SEFSLARADVKAMEAIYRQIIGSDPTQLERPPVATEL-----------PENLDVGYR 235 Query: 265 IGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-TH 323 +G D++ P I Y S + + L P + + +++ S PG N Sbjct: 236 VG---DIMH--PAILYARYLTDASSYNVKAKEGALLPKVDFSTTVSYNRIYSGPGENGVS 290 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS----INED 379 S G L +PIF+ G+ + +R++ +EQ+ + + A V ALT+ + Sbjct: 291 QSVGVSLSVPIFEGGRTSAQVRQS----KEQFEQARLQLTVAQNGVRQALTAAWFQLEGA 346 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + V + +V + ++ + R G+ + LD+L+ ++ L+IA+R + + Sbjct: 347 RASVIAYRESVRAAEIALKGRIQENRVGQATTLDVLNSRTQLINAQIALAIAERDVVVAS 406 Query: 440 VDLYIAIG 447 + +IG Sbjct: 407 YSVQSSIG 414 >gi|254456533|ref|ZP_05069962.1| outer membrane protein TolC [Candidatus Pelagibacter sp. HTCC7211] gi|207083535|gb|EDZ60961.1| outer membrane protein TolC [Candidatus Pelagibacter sp. HTCC7211] Length = 430 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 35/300 (11%) Query: 70 QQNLTILQATERINAAKENILSVRADLFPSSYASISHRFI-PNLKTNSTGQLDSDWKID- 127 Q N+ + E I A++E+I +AD P+ S S N TN +G S D Sbjct: 32 QNNIQLNAERENIKASEEDINISKADYKPTLTLSGSKSIENTNKLTNQSGGDASSSDADP 91 Query: 128 ------------LFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERIS 175 +G+ E +L LD A A++ + +V+ I + + +E++S Sbjct: 92 LTTSIKLEQTILDYGRDLSFEKNLIGLDLAKAKLIKKEQDVLYSAIDVFTNLILAREKLS 151 Query: 176 IAHQILDLYKKNIELSHLKFTQG-------ATSKLSLVKLEAEIKSIESDIPTLEKSFRM 228 I + L+L + +E ++ +G A ++ SL +A+ +SD+ T+ K + Sbjct: 152 INRKNLNLLNRQLENDKIRLDRGQITIADLAQTESSLAGAQAQFTQAKSDL-TISK---L 207 Query: 229 NVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR-NRPDIRYQEKKLAD 287 N NI + P + ++K SN+ + IP ++ +L + N PDI+ + Sbjct: 208 NYENIIGKIDNPKS-----LKKNSNSI---VSIPKSLDEAINLSKQNNPDIKIANFDVVQ 259 Query: 288 SVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 S + IA++DL P+ SL+ + D +S + P + GK KS I + Sbjct: 260 SEKDLAIAETDLKPTASLSLEKSFADDLSSTIDRKDKDILKATVSWPFYSGGKKKSKINK 319 >gi|325926617|ref|ZP_08187931.1| Outer membrane efflux protein RaxC [Xanthomonas perforans 91-118] gi|325542969|gb|EGD14418.1| Outer membrane efflux protein RaxC [Xanthomonas perforans 91-118] Length = 460 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 42/184 (22%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT------ 322 A I + P +R Q+ +++ + A++ A++ P+LSL ++ NS+ G T Sbjct: 239 ATAIADNPALRAQQLQVSAAEAQVSAARAGHLPTLSLGANVG--RSNSWGGQGTVDEAAG 296 Query: 323 ----------HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ------------- 359 S G L +PIF G +S +R+A S Q T++ Sbjct: 297 NFTTAGRDIDTDSVGITLTIPIFAGGATQSAVRQALSQRDIQQDTYEQQKRALDRNTRNA 356 Query: 360 -ETVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGR 408 +TV+ I EVE ++ + Q +E+ +++++ + +NY Q R Sbjct: 357 YQTVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSR 416 Query: 409 YSLL 412 Y+ L Sbjct: 417 YNFL 420 >gi|148266240|ref|YP_001232946.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] gi|146399740|gb|ABQ28373.1| outer membrane efflux protein [Geobacter uraniireducens Rf4] Length = 458 Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 39/197 (19%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT-HDNSFPGYNTHWSFGPKL 330 ++NR D++ EK + + + +A+S P++ + S L D F N W G L Sbjct: 274 LQNRIDMKTMEKDVDKAALGVKMARSAYLPTIYADASYQLNDRDVPFGNDNDSWFVGATL 333 Query: 331 YLPIFD----KGKIKSNIRRAESSAQ--------------EQYITWQETVLNAIKEVENA 372 +FD + ++K N+ +++A+ E ++ +QE A+K++E A Sbjct: 334 RWELFDGMRRRNEVKKNVALEKAAAEYVDDYRQEVDLQVMESFLRYQE----ALKKLEVA 389 Query: 373 L-TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIA 431 +S++ D+ +V L +K S+ ++ ++LD + A + ++ Sbjct: 390 RNSSVDADE--------SVRLLEKRFQNSLA-------TMSELLDAQTALNRARANVIDT 434 Query: 432 KRQLAKSYVDLYIAIGS 448 + QLA S D+Y+A G+ Sbjct: 435 ENQLALSAADIYLAAGT 451 >gi|330901930|gb|EGH33279.1| NodT family outer membrane efflux lipoprotein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 133 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 1/125 (0%) Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 FGP L I G ++ I +AE+SAQ + VLNAI+E + L Sbjct: 2 FGPLLNWTIPSNGS-RARIHQAEASAQAALARFDGVVLNAIRETQTGLAQYTALLDRRDA 60 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 L+ A + K++ Y+ GR S L L R V ++ A Q+A ++L++A Sbjct: 61 LKDAEQSAKEAADQKHRFYQAGRASFLADLQATRTYTDVRAQMAEANTQVAMGQINLFLA 120 Query: 446 IGSGY 450 +G G+ Sbjct: 121 LGGGW 125 >gi|228471888|ref|ZP_04056658.1| putative outer membrane efflux protein [Capnocytophaga gingivalis ATCC 33624] gi|228276740|gb|EEK15446.1| putative outer membrane efflux protein [Capnocytophaga gingivalis ATCC 33624] Length = 436 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 20/215 (9%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 A+ N+ ++ +Y+ A + E I+ A ++ + + +F GA +K+ L+++E + Sbjct: 129 AQNNITLSVLEAYLQALYQYENITAAKNTARSSEEELAQARKRFENGAIAKIDLIEIETQ 188 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYP-ATEF-LHYMQKQSNNFQPNLYIPIN--IGI 267 + + +I + + V + LL P T+F + +QK+ + PI I Sbjct: 189 NANNQYNIILAQNQYETQVLALKQLLELPIGTDFKIEIIQKEE------VSAPIENKEEI 242 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-DNSFPGY------ 320 +++ P+ + EK+ + I IAKS PSL+L+ + + D + Y Sbjct: 243 FRQALQHLPNTKVYEKQKEIAQKDIQIAKSGYLPSLTLSAGLNTGYSDRAADKYMEQLRN 302 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNI---RRAESSAQ 352 N + G L +PIF + + ++N+ + AES A+ Sbjct: 303 NFGETVGLSLNIPIFSRYQNRNNVALAKIAESQAE 337 >gi|255690518|ref|ZP_05414193.1| putative outer membrane efflux protein [Bacteroides finegoldii DSM 17565] gi|260623970|gb|EEX46841.1| putative outer membrane efflux protein [Bacteroides finegoldii DSM 17565] Length = 488 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 4/152 (2%) Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPG-YNTHWSFGP 328 NRP+IR E K+ + +++ PS++L G+ +T+ NSF + W+ G Sbjct: 307 ENRPEIRSLELATQIYKQKVNVTRAEHLPSIALMGNYMVTNPSVFNSFENKFKGMWNVGV 366 Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPI+ G+ + A++ A+ Q+ +V A +NE K + Sbjct: 367 MVQLPIWHWGEGIYKTKAAKAEARIAQYQLQDAREKIELQVNQAAFKVNEAGKKLVMASQ 426 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 +E ++++ + + +R+G + ++L+ + A Sbjct: 427 NMEKAEENLRYATLGFREGVIATSNVLEAQTA 458 >gi|71907506|ref|YP_285093.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] gi|71847127|gb|AAZ46623.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] Length = 413 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 142/328 (43%), Gaps = 20/328 (6%) Query: 119 QLDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIA 177 QL D I+ G+R + + A L+++ +D A + L +Y R +E+ ++A Sbjct: 90 QLRIDQLIERGGKRTLRAKGAEARLEASRFDLDDATRQQLGDLRQTYYQLRLAQEKQALA 149 Query: 178 HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLL 237 LY K+ E L+ G + + + +L+ + ++D + ++ L+ Sbjct: 150 RDTAALYGKSTEAGRLRQKAGDIAPVDVSRLQIDQARADADARQAQADLAQAQQMLAYLI 209 Query: 238 GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 G A Q + + P L P D RPD+ +K++A + A +A++ Sbjct: 210 GREA----EAAQLVAADNWPALEEKALSAAPLD---ERPDLAAAQKRIAAAEADRDLARA 262 Query: 298 DLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS---AQEQ 354 S + ++ + + T+ S+G + +P+F + + I RAES A+ Q Sbjct: 263 ----KKSRDVTVGFQFERNLQNAPTN-SYGVGISVPLFIWHEYEGEIARAESDLNIARLQ 317 Query: 355 YITWQETVLNAIKEVENALTSINED-KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLD 413 Y + + NAL ++ + +++ L E K+ L+ Y +G L+D Sbjct: 318 YEQQHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKAAELA---YNKGAMGLMD 374 Query: 414 ILDIERATAKVEVDLSIAKRQLAKSYVD 441 +LD R +++++ + A+ AK+ D Sbjct: 375 LLDARRTLRQIQIEAASARADYAKALSD 402 >gi|206602405|gb|EDZ38886.1| Putative outer membrane efflux protein [Leptospirillum sp. Group II '5-way CG'] Length = 483 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 60/295 (20%), Positives = 127/295 (43%), Gaps = 35/295 (11%) Query: 178 HQILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 HQ+L KK++E + L++ G L + + +++ + R + Sbjct: 184 HQVL-ADKKSLEDATLQLARARLRYATGTGIVLDVTRARVNVEAARLALIRSRDQVRTDA 242 Query: 231 HNISTLLGYPATEFL--HYMQKQSNNFQ---PNLYIPINIGIPADLIRNRPDIRYQEKKL 285 N++ ++G L ++ N + P+ +P+ + +RP+ ++E + Sbjct: 243 VNLAQVMGLEKNVRLVAQDVEHDPNTLESPDPDRDLPVALS-------HRPE--WKEARA 293 Query: 286 ADSVAKIGI--AKSDLYPSLSL----------NGSIALTHDNSFPGYNTHWSFGPKLYLP 333 A+ G+ A+S YPSL+ G++ T+ + Y+T ++FG L +P Sbjct: 294 NVEAARAGLKNARSQNYPSLNALFQSFTATLPRGALPFTYIPNNSPYST-FNFGGILTVP 352 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF+ G + RA S T + L ++ A +I++ ++ + + + E Sbjct: 353 IFEGGYMIHQTARARSDLLTAIDTRESVRLQVSADLRKAAIAISDARQQLEEARAEEENA 412 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 +K+ +L YRQG+ +D++D + A + + A+ L +V A G+ Sbjct: 413 RKNDTLVEEAYRQGQVQSVDVMDAQTALRQARESVIRARYLLMNGFVAYQYARGT 467 >gi|87198212|ref|YP_495469.1| Type I secretion outer membrane protein, TolC [Novosphingobium aromaticivorans DSM 12444] gi|87133893|gb|ABD24635.1| Type I secretion outer membrane protein, TolC [Novosphingobium aromaticivorans DSM 12444] Length = 485 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 15/188 (7%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG---------SIALTHDNSFPGYNT 322 + N PD+ ++ + + +A + P++SL G ++ +F + T Sbjct: 241 LENNPDLLAARERSKAAGFDVKVADAAKLPTISLFGGSNYTDYFNTLGGNSSAAFAQHQT 300 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVENALTSINED 379 G + +P++ G + R+A ES+ EQ I + V+ ++ + + NE Sbjct: 301 TAQAGVRASIPLYQGGAPAAQTRQAQARESATLEQEIGVEREVIATVRSAYASWKAANE- 359 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 I+ Q AV+ S+ G ++L+ILD E+ + +V L A+R + Sbjct: 360 --IIAMNQTAVDAAALSLEGVRAENTVGNRTILNILDAEQELLRAQVQLVAARRNAYVAG 417 Query: 440 VDLYIAIG 447 +L A+G Sbjct: 418 FNLLAAMG 425 >gi|221234316|ref|YP_002516752.1| type I secretion outer membrane protein rsaFb [Caulobacter crescentus NA1000] gi|220963488|gb|ACL94844.1| type I secretion outer membrane protein rsaFb [Caulobacter crescentus NA1000] Length = 488 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 92/453 (20%), Positives = 185/453 (40%), Gaps = 80/453 (17%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQN 72 +L A C+ G LL FSI N++ L + + +A Q N Sbjct: 16 LLAAACSAG---------LLAGSFSIANAETLADA-----------------IALAYQTN 49 Query: 73 LTILQ--ATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKID--- 127 T+ Q A+ RI E ++ + P+ A+ I TN +D K+ Sbjct: 50 PTLQQQRASARIT--DEGVVQAKTGFRPTVGATAD---ITGANTNPA-SAGADVKLSGSS 103 Query: 128 --------LF-GQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSYIDARHFKERISI 176 L+ G R S A D SA + + V+ ++ +Y+D R +ER+ I Sbjct: 104 AALSIIQPLYTGGRASAGVSAAEADVLSAREGLRAVEQGVLVSVVQAYVDVRRDQERLRI 163 Query: 177 AHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTL 236 A + + + ++ +E S+ +F G ++ + + +A + S ++ + + ++ + + + Sbjct: 164 AKENVAVLQRQLEESNARFDVGEITRTDVAQSQARLASAKASLSGAQAQLEVSRASYAAV 223 Query: 237 LGYPATEFLHYMQKQSNNFQPNLY--IPINIGIPADLIR-NRPDIRYQEKKLADSVAKIG 293 +G E +P+L +P ++ + + N P + + + A++ Sbjct: 224 VGQTPGELAP---------EPSLAGLLPASVDQAFEAAQTNNPGVTSAKFNEEAAAARVA 274 Query: 294 IAKSDLYPSLSLNGSIALTH------DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +AK+ P++S S+ + F Y+ S +P+F G S +R A Sbjct: 275 VAKAGYRPTVSARASLGYDATRRSGVGSQFDDYSRTVSGAITASIPLFAGGLTTSQVRAA 334 Query: 348 ---ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 ES+A+ + T AI++V NA +++ + + A E ++ ++ Sbjct: 335 NERESAARSAVEGAKRT---AIQQVSNAWSNLLASRAGLV----ANEEQVRATRIAFEGV 387 Query: 405 RQ----GRYSLLDILDIERATAKVEVDLSIAKR 433 RQ G + LD+L+ + + E+ L A+R Sbjct: 388 RQEQQVGLRTTLDVLNAQLELSNAELALVSARR 420 >gi|17548749|ref|NP_522089.1| putative outer membrane cation efflux system protein [Ralstonia solanacearum GMI1000] gi|17430998|emb|CAD17679.1| putative outer membrane cation efflux system protein [Ralstonia solanacearum GMI1000] Length = 451 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 17/158 (10%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 PD+ + ++ A++ +S +PSL+L GS+ + P G + +P+F Sbjct: 284 PDLEADRAAVREAEARLAHERSQRWPSLALRGSV-----DRQPDLQDS-RVGLVVSIPLF 337 Query: 336 DK-----GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 D+ G+ + + RA ++ +++ + ++ V +A ++ E A + + + V K Sbjct: 338 DRREGPVGEAVAALERARATLRDRELQMRQAVESAYRQYEIAQSQVGALESGVVKQ---- 393 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 + ++ ++ YR G +LD LD +R + DL Sbjct: 394 --AESTLRVAEAAYRHGERGILDYLDAQRVFRQARNDL 429 >gi|198276164|ref|ZP_03208695.1| hypothetical protein BACPLE_02353 [Bacteroides plebeius DSM 17135] gi|198270976|gb|EDY95246.1| hypothetical protein BACPLE_02353 [Bacteroides plebeius DSM 17135] Length = 457 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 84/404 (20%), Positives = 167/404 (41%), Gaps = 54/404 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKTNST 117 +L + +K+ ++ NL++ + + AK + RA L+P S+ A + F P + Sbjct: 39 TLEECLKLGIENNLSLEGSRNEMRKAKHLLSENRAKLWPQISAVAGFNDNFNPPVSVTDG 98 Query: 118 GQLDSDWKIDLFGQRR-----HIESSLANLDSAYAQVDIAK-LNVISKLIPSYIDARH-F 170 + + + Q ++ L N + Y VDIA+ LN +++L SY AR Sbjct: 99 SAYGNLYNVTKTLQYNASAGLQLQMPLYN-QTVYTAVDIARTLNELNRL--SYEKAREDL 155 Query: 171 KERISIAHQI-------LDLYKKN-IELSHLK------FTQGATSKLSLVKLEAEIKSIE 216 +IS + + L L ++N + L L+ F G ++ + ++ +++ + Sbjct: 156 MMQISKMYYLGQNTMEQLTLIQENMVRLRELRDITLAFFDNGMAMEVDVKRVNINLENQQ 215 Query: 217 SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP 276 + ++ + ++ YPA E + + Q A L R Sbjct: 216 VQYDNAKSMLVQQLNLLKYVMDYPAEEEITLTPVDTERMQS-----------ASLTGLRS 264 Query: 277 DIRYQEKKLADSVAKIGIAKSDL-----YPSLSLNGSIALTH--DNS----FPGYNTHW- 324 D+ E +L S K+ + DL PSL+L GS + D + G + HW Sbjct: 265 DLY--ELQLLQSQEKLARQQKDLIRQGYLPSLTLTGSWMYSAYTDKARHWFHSGPSNHWY 322 Query: 325 ---SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 G L +PIFD ++ IR+A+ + + ++ T+ N + NA + +++ Sbjct: 323 PSTGLGITLRVPIFDGFDKRARIRKAQIDQENAKLNYENTLKNMQTQYLNATNELMNNQR 382 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 K + L + ++ YR+G S+ ++L E ++ + Sbjct: 383 NFKKQKDNYLLAEDVYQVTTDRYREGIASMTEVLQDEMRMSEAQ 426 >gi|86159531|ref|YP_466316.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776042|gb|ABC82879.1| outer membrane efflux protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 443 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 3/192 (1%) Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS 316 P L +P + + + +RP+I Q+ ++A + A + A + L P LS +G+ A D Sbjct: 251 PELEMPAEA-LAGEALEHRPEIAAQDAQVAAAEAGVRSAWARLVPQLSASGA-AFAADTP 308 Query: 317 F-PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTS 375 + G W L ++D G R+AE+ A + L +EVE+ Sbjct: 309 YVTGEKDGWRVTLDLTWSLYDGGFRYGKRRQAEAQATGARAGAEAQRLAVRQEVEDGRRD 368 Query: 376 INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQL 435 + ++ + Q +L ++ + + ++ G S LD++D E+ L+ A+ +L Sbjct: 369 LRVARERLRLAQTQSQLAGETAASARRSFEAGIASSLDVIDANDREYLAEIGLADARARL 428 Query: 436 AKSYVDLYIAIG 447 A++ + L A+G Sbjct: 429 AQARLALGRALG 440 >gi|298206905|ref|YP_003715084.1| putative outer membrane protein TolC [Croceibacter atlanticus HTCC2559] gi|83849539|gb|EAP87407.1| putative outer membrane protein TolC [Croceibacter atlanticus HTCC2559] Length = 451 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 114/279 (40%), Gaps = 24/279 (8%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N +L Y D E + + Q L++ +K + S F G ++KL + L+AE+ Sbjct: 148 NTTLQLFSVYFDVARLTENLEVFKQALEISQKRVTRSQYGFDYGQSTKLEV--LQAEVDV 205 Query: 215 IESDIPTLE-KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR 273 + + L K +N ++ E + + F+ +L + + A+ Sbjct: 206 VTDSVIVLNAKQQLLNAKRDLNVVLNRELETIGFQVDTLVEFENDLLLESFVE-KAEF-- 262 Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-----FPG---YNTHWS 325 N + E + S +I K+ L PS+ L GS NS FPG + + Sbjct: 263 NNVTLLQAESQTRISDFEIKANKALLLPSVGLTGSYGWNRVNSPASAFFPGSVSRGNNLT 322 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G L +FD G+ I+ A+ Q + Q+ L +++ NAL + KI Sbjct: 323 VGANLTWNLFDGGRSIVGIKNAKILNDSQKLQEQQFELQVNRDIANALGNYRNLLKIYKI 382 Query: 386 LQHAVELHKKSMS----------LSMINYRQGRYSLLDI 414 + VE ++ ++ +S I +RQ + +L+++ Sbjct: 383 QEQNVETNQNNLERSRERLNLGQISSIEFRQAQINLINV 421 >gi|295085307|emb|CBK66830.1| Outer membrane protein [Bacteroides xylanisolvens XB1A] Length = 445 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 70/314 (22%), Positives = 140/314 (44%), Gaps = 30/314 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF--------IPN 111 +L + + A++ N+ I Q+T + A K ++ + + P+ S S + I N Sbjct: 32 TLRQCIDYAIEHNIEIRQSTNSVEANKVSVNTSKWTRLPNLSGSASQNWSWGRTASPIDN 91 Query: 112 L-----KTNSTGQLDSDWKIDLFGQRRHIESSLANLD--SAYAQVDIAKLNVISKLIPSY 164 N++ L ++ I G + + SLA LD +A ++ AK ++ + +Y Sbjct: 92 SYSDINSANTSFSLGTNVPI-FTGLQLSNQYSLAKLDLKAAIEDLNKAKEDIAINVTSAY 150 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + +E +AH ++L K ++ G S + + +A + E + Sbjct: 151 LQVLFNQELSKVAHNQVNLSKDQLKRIQGLHGVGKASPSEVAEAQARVAQDEMTAVQSDN 210 Query: 225 SFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 ++++++ +++ LL P E F+ K+ F+ +L P +I A + +P I+ E Sbjct: 211 TYKLSLLDLTQLLELPTPEGFVLESPKEELEFE-SLTPPDDIYTQA--LAYKPSIKAAEY 267 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTH-------DNSFPGY---NTHWSFGPKLYLP 333 +L S+ I IA+S YP LS + + + +NSF N + G L +P Sbjct: 268 RLQGSLNSIRIAQSAFYPQLSFSAGLGSNYYTVSGRSENSFGSQIKNNLNKYIGFNLSVP 327 Query: 334 IFDKGKIKSNIRRA 347 IF++ ++ +R A Sbjct: 328 IFNRFSTRNRVRTA 341 >gi|188997290|ref|YP_001931541.1| outer membrane efflux protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932357|gb|ACD66987.1| outer membrane efflux protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 425 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 88/401 (21%), Positives = 160/401 (39%), Gaps = 88/401 (21%) Query: 97 FPSSYASISHRF--------IPNLKTNSTGQLDSDW---------KIDLFGQ-RRHIESS 138 FP+ +AS S +F IPN S Q + D+ I GQ + I+ S Sbjct: 56 FPTFFASASEKFYNKTPMTKIPNFPI-SFKQSNKDFFTFDIGLNQAIYTGGQVKNKIQIS 114 Query: 139 LANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL-------S 191 NL++ K + ++++ +Y+D + +A ++D+YKK + Sbjct: 115 KHNLEATKYYYKEMKDEITAQVVKAYLD-------VFVASALVDVYKKEYQAVESIYKQQ 167 Query: 192 HLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ-- 249 F +G +K+ L++ + + +E + + + ++ + +S L G E + + Sbjct: 168 QEFFKEGLITKVDLLQSKVRLAEVERSLTEAKGNLKIALARLSKLTGKNIQEDEKFEKPV 227 Query: 250 ---KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 K+ N+Q L +N NR I + ++ + S AK I K+ P + + Sbjct: 228 LNIKELENYQELLMQALN---------NRNIISFYKENIKQSQAKAEIEKAQFLPKVFVQ 278 Query: 307 GSIALTHDNSF--PGYNTHWSFGPKL----------YLPI--------FDKGKIKSNIRR 346 G T + + P N ++ G ++ YL +D IK NI+ Sbjct: 279 GEYLYTTQSPYLDPKGNFVFTAGLQVEFQGVEPYYKYLSAKSNTQKLNYDLENIKENIKL 338 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 +A E YIT ++ +K E +L E ++V K Q+A +L + Sbjct: 339 EIKTAYENYITAKQN----LKVAEESLAYAKEYFELV-KEQYANQLATNT---------- 383 Query: 407 GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 D+L+ E + K I L K+YVDL + G Sbjct: 384 ------DLLNAESSYTKAYESKEINFYNLQKAYVDLMKSAG 418 >gi|86140726|ref|ZP_01059285.1| putative outer membrane transport/efflux protein [Leeuwenhoekiella blandensis MED217] gi|85832668|gb|EAQ51117.1| putative outer membrane transport/efflux protein [Leeuwenhoekiella blandensis MED217] Length = 441 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 34/188 (18%) Query: 268 PADLIRNRPDIRYQ----EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH 323 PA++ + RY+ E LA + + IAK +P+LS +F GY+T Sbjct: 242 PAEITDAAKEERYEVKIAENNLALAEKDVQIAKGASWPTLS-----------AFFGYSTR 290 Query: 324 WS-------------------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364 +S +G +L +PI + + K+NIRR++ +A I ++ L+ Sbjct: 291 YSEQDITNTFQEQLYLNDGISYGLRLNVPILNGFQTKNNIRRSKIAADRAAINLEQAQLD 350 Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424 V A K Q AVE + + S S Y G + + ++ Sbjct: 351 LESNVYQAYLDAQGALKAYEAAQTAVESQELAFSYSQDRYEVGLINAFNFSQAKQRYDNA 410 Query: 425 EVDLSIAK 432 ++DL+ AK Sbjct: 411 QIDLNRAK 418 >gi|71899951|ref|ZP_00682098.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Ann-1] gi|71730314|gb|EAO32398.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Ann-1] Length = 452 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 49/253 (19%), Positives = 105/253 (41%), Gaps = 25/253 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K+ + + + G + L + A +D T + + ++ + G P T+ Sbjct: 157 KRQFDYAQKRLEVGLSPITDLHEARASYDQARADTITARNTLQDYYQALAEITGQPVTDL 216 Query: 245 LHYMQKQSNNFQPNLYIPINIG----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + +F+P +P + + I N P ++ Q+ ++ + + I A+ + Y Sbjct: 217 RGLPE----DFRPE--VPAKFSNIDQLVTEAISNNPSLKAQQLQVNAAESSISAARGEHY 270 Query: 301 PSLSLNGSI--------------ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 P+LSL+GS+ AL D + P +T+ + L +P+F G +S +R+ Sbjct: 271 PTLSLSGSLGKSKAWGSSSGAMSALIPDRNQPISDTN-NLQLTLSIPLFAGGATQSRVRQ 329 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + Q +++ + NA ++ V + AV + ++ S + Sbjct: 330 AIAQRDIQQDNYEQNKRTLNRNTRNAYQNMIAGISEVEARRLAVVSAQAALDASQVGLEV 389 Query: 407 GRYSLLDILDIER 419 G +LLD++ +R Sbjct: 390 GTRTLLDVVQNQR 402 >gi|329889845|ref|ZP_08268188.1| type I secretion outer membrane protein, TolC family protein [Brevundimonas diminuta ATCC 11568] gi|328845146|gb|EGF94710.1| type I secretion outer membrane protein, TolC family protein [Brevundimonas diminuta ATCC 11568] Length = 524 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 90/450 (20%), Positives = 172/450 (38%), Gaps = 76/450 (16%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 SL + + +A + N T+L A E+I+ RA L P+ AS + Sbjct: 27 SLQEAIGLAYRTNPTLLAQRANQRALDESIVQARAGLRPTINASAGVDYSRTRTDRVTTT 86 Query: 109 ---------------------IPNLKTNSTGQLDSDWK---------IDLFGQRRH-IES 137 +P + S G ++SD I G+ H I + Sbjct: 87 IPGQTFPIDTNGDGVPDATGTLPGSSSTSGGTIESDGASASVSLTQNIWTAGRVSHGISA 146 Query: 138 SLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQ 197 + AN+ + + + V+ +I +Y D E + I + L + ++ ++ S+ +F Sbjct: 147 AEANVLAGRENLRQVEQQVMVTVIQAYADVTRDLEILRIRQENLKVLRRQLDESNARFEV 206 Query: 198 GATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQP 257 G ++ + + EA + ESD+ + + ++ + ++G + +N Q Sbjct: 207 GEITRTDVAQSEARLAQSESDLASAQAQLSVSRAAYAAVVG-----------QAPSNLQ- 254 Query: 258 NLYIPINIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 +P G+P D + P + + A + A+++ PS LN S Sbjct: 255 --TLPTLPGLPTDFDAAMDVGLAENPGVLAAVHAQRAAEANVAAARAEYLPSARLNASYG 312 Query: 311 LTHDNSFPGYN----THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 T N G + T ++ G + +P+F G +S + +A A I + + Sbjct: 313 GTA-NDLSGLDLGDRTSFTAGATVSVPLFTGGLNRSRVAQALERANAAQINVEGERRTVL 371 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ----GRYSLLDILDIERATA 422 + V +A + V + AV ++ S++ RQ G + LD+L+ E Sbjct: 372 QSVSSAYAQSASARSSVQAGEQAV----RAASVAAEGVRQEAQVGLRTTLDVLNQELELR 427 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 EV L+ A+R + L A+G P Sbjct: 428 SAEVALTSARRNEYVAQAQLLAAMGRLGGP 457 >gi|326386352|ref|ZP_08207975.1| Type I secretion outer membrane protein, TolC [Novosphingobium nitrogenifigens DSM 19370] gi|326209013|gb|EGD59807.1| Type I secretion outer membrane protein, TolC [Novosphingobium nitrogenifigens DSM 19370] Length = 490 Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust. Identities = 77/377 (20%), Positives = 148/377 (39%), Gaps = 58/377 (15%) Query: 95 DLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKL 154 D +PS AS S N S G G R + ++ +++ A + + Sbjct: 85 DFYPSDTASASTSL--NAPVYSGG-----------GVRNSVRAAKTRVEAGQASLRSTES 131 Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 V S ++ +Y+D + + + + + N++ + +F G ++ + + + + Sbjct: 132 GVFSSVVAAYLDVTLNTAIVGLNRNNVQVLEVNLKATTDRFEIGDVTRTDVAQSNSRLAL 191 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ---KQSNNFQPNLYIPINIGIPAD- 270 +D+ T E + IS A E HY+Q + P P G+PA Sbjct: 192 ARADLRTAEANL------IS------ARE--HYIQVVGHAPGDLDP---APPLAGLPASP 234 Query: 271 ------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---------- 314 + + PD+ + + A S P +++ GS T Sbjct: 235 DEAVQIALDSNPDLAAAHYATKAADYDVRSASSARMPKIAVVGSYNYTDYLGTLSPLAQA 294 Query: 315 -NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA---ESSAQEQYITWQETVLNAIKEVE 370 S P +T G + +PI+ G + IR+A E +AQ++ I+ + V+ ++ Sbjct: 295 IGSLPHVSTA-QVGLQATIPIYQGGGPSAQIRQAQANEGAAQDKEISVERQVIATVRADY 353 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 +L + N++ + Q AVE S+ G ++L+ILD E+ +V L Sbjct: 354 ASLQAANDN---IAMNQTAVEAAALSLEGVRAENTVGNRTILNILDAEQELLNAQVKLVT 410 Query: 431 AKRQLAKSYVDLYIAIG 447 A+R + +L A+G Sbjct: 411 ARRNAYVAGFNLLAAMG 427 >gi|83701786|gb|ABC41332.1| outer membrane protein TolC [Vibrio fluvialis] Length = 438 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 83/174 (47%), Gaps = 9/174 (5%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNGSI--ALTHDNSFPGYNTH-----WSFGPKLYLPI 334 +++ VAK I +A S PSL+L+G +++++ Y+T+ ++ G L +P+ Sbjct: 248 RISQDVAKDNISLASSGHLPSLTLDGGYNYGREYNDNYSSYDTYHENNDFNIGLNLTVPL 307 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 + G + S ++AE + + + + +K V +IN V + +V + Sbjct: 308 YSGGNVSSQTKQAEYAYVAASQDLEASYRSVVKNVRAYNNNINASIGSVRAYEQSVISAQ 367 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + + G +++D+LD R V+ +LS A+ + + L A+G+ Sbjct: 368 SALDATEAGFDVGTRTIVDVLDATRTLYSVKKNLSDARYSYIINVLQLRQAVGT 421 >gi|251772551|gb|EES53117.1| outer membrane efflux protein [Leptospirillum ferrodiazotrophum] Length = 487 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 13/188 (6%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL----------NGSIALTH-DNSFPGY 320 + +RP+ + L + A + +K+ YPS++ +G++ T+ N++P Y Sbjct: 279 LSHRPEWKEATADLESAKATLKNSKAQNYPSITALGQSFTATLPSGALPFTYIPNNYP-Y 337 Query: 321 NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 +T +S G L +PIF+ G + RA + + T L+ +++ A SI + K Sbjct: 338 ST-FSIGGTLTVPIFEGGYMVHQTARARADVMTARDNREATRLSIATDLKKAALSITDAK 396 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + + +++ +K+ L YR G+ +D++D + A + + A+ L S V Sbjct: 397 EQLDWALTSLDNARKNEMLVQEAYRMGQVQSVDVMDAQTALRQARESVIRARYLLMNSNV 456 Query: 441 DLYIAIGS 448 A+G+ Sbjct: 457 LYRYAVGT 464 >gi|319955006|ref|YP_004166273.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] gi|319423666|gb|ADV50775.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] Length = 434 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 70/343 (20%), Positives = 145/343 (42%), Gaps = 43/343 (12%) Query: 125 KIDLFGQRRHIESSLANLDSAY------AQVDIAKLN-------VISKLIPSYIDARHFK 171 +I+ + + I+ L N D Y +++D L +I ++ SY+ + Sbjct: 107 QIENYATKLEIQQPLLNFDGLYQRKAAKSKMDAMSLQTERTEDYLIFEVDKSYMQLQLAY 166 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 + +++ + L+ N +L+ F QG + ++ +E + I++ + +S + NV Sbjct: 167 KAVAVLEKALEAADVNKKLAEDSFKQGYLQRADVLNVEVRVTEIQNQL----QSAKSNVQ 222 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI-------RNRPDIRYQEKK 284 N S L + + + +YIP + + L NR DI+ + Sbjct: 223 NASNYLSFLMNDKTYV-----------VYIPADELTVSTLTIEDKTVSENRSDIKAMQ-- 269 Query: 285 LADSVAKIGIAKSD---LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIK 341 LA S A + K+D P L+ GS L D F G + FG +L IF K Sbjct: 270 LA-SNAYEAMNKADKMAFLPRLNAFGSYELYDDQLFQGDANGYLFGAQLSWDIFQGSKRF 328 Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 ++++S ++ + + + V + E+ A + + K + A+E ++S+ + Sbjct: 329 GKAQKSKSEFEKSKLEYSQYVSQSNLELNKAKRAFLDSKNKLKLSALAMEQSEESLRIRT 388 Query: 402 INYRQGRYSLLDIL--DIERATAKVEVDLSIAKRQLAKSYVDL 442 +++G D+L D + A ++E +I + A++Y+ Sbjct: 389 NRFKEGLEKTSDLLLADTQYAQKQLEYYQTIFEYNYAQAYLQF 431 >gi|301165794|emb|CBW25366.1| putative oter membrane protein [Bacteriovorax marinus SJ] Length = 407 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 22/250 (8%) Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF--- 226 +E+ ++ +++L +K + L + G K L LE++ +++D+ E Sbjct: 139 LEEKREVSKLLVNL-EKRVRLVRKRTKIGRDRKADLYALESQYDRLKADLIDTESKLEEA 197 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY-IPINIGIPADLIRNRPDIRYQEKKL 285 R N N S L K + NF+ + +N+ DL NRP+++ E + Sbjct: 198 RKNFLNFSGL-------------KSAGNFERRVDPFALNLNESVDL-ENRPELKSLELEY 243 Query: 286 ADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR 345 S+ + I KS +P ++L + L D S+ G + W L + IFD GK ++ Sbjct: 244 ETSLTRAKIEKSSYFPQVTLGSNYYL--DKSYTGRD-EWDVSVNLTMNIFDFGKTAASYD 300 Query: 346 RAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYR 405 A Q N+ +E N + N K + L+ ++ K S + + + Sbjct: 301 TQNIQALIDKTRLQYNRSNSDREWSNFVKVFNHKKSQLASLKKSLSQIKASYTEQVKDLD 360 Query: 406 QGRYSLLDIL 415 +G + +D++ Sbjct: 361 KGLVAQIDVI 370 >gi|23007359|ref|ZP_00049265.1| COG1538: Outer membrane protein [Magnetospirillum magnetotacticum MS-1] Length = 357 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 28/183 (15%) Query: 181 LDLYKKNIEL-------SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 L+L + N+E+ + +F G ++ + + EA + S + E + R ++ Sbjct: 161 LELQRNNVEVLEEQLRQTRDRFNVGEVTRTDVAQAEARLAGARSQVSAAEAALRASIGIY 220 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-------IRNRPDIRYQEKKLA 286 ++G + P P++ +PA L ++ P I + Sbjct: 221 RQIIGV-----------EPRQLAPGR--PLDRYVPASLDQAILIGLKEHPQILASLHSVD 267 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN-THWSFGPKLYLPIFDKGKIKSNIR 345 + ++ +A+ LYP + G++ +D FPG N S ++ +P++ G + IR Sbjct: 268 VAELQVKVAEGALYPQAQITGAVQQRYDQQFPGDNGVTASIVGRVNIPLYQGGAEYAAIR 327 Query: 346 RAE 348 +A+ Sbjct: 328 QAK 330 >gi|28199830|ref|NP_780144.1| outer membrane export factor [Xylella fastidiosa Temecula1] gi|182682581|ref|YP_001830741.1| TolC family type I secretion outer membrane protein [Xylella fastidiosa M23] gi|28057951|gb|AAO29793.1| outer membrane export factor [Xylella fastidiosa Temecula1] gi|182632691|gb|ACB93467.1| type I secretion outer membrane protein, TolC family [Xylella fastidiosa M23] gi|307578863|gb|ADN62832.1| TolC family type I secretion outer membrane protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 452 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/253 (19%), Positives = 105/253 (41%), Gaps = 25/253 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K+ + + + G + L + A +D T + + ++ + G P T+ Sbjct: 157 KRQFDYAQKRLEVGLSPITDLHEARASYDQARADTITARNTLQDYYQALAEITGQPVTDL 216 Query: 245 LHYMQKQSNNFQPNLYIPINIG----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + +F+P +P + + I N P ++ Q+ ++ + + I A+ + Y Sbjct: 217 RGLPE----DFRPE--VPAKFSNIDQLVTEAISNNPSLKAQQLQVNAAESSISAARGEHY 270 Query: 301 PSLSLNGSI--------------ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 P+LSL+GS+ AL D + P +T+ + L +P+F G +S +R+ Sbjct: 271 PTLSLSGSLGKSKAWGSSSGAMSALIPDRNQPISDTN-NLQLTLSIPLFAGGATQSRVRQ 329 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + Q +++ + NA ++ V + AV + ++ S + Sbjct: 330 AIAQRDIQQDNYEQNKRTLNRNTRNAYQNMIAGISEVEARRLAVVSAQAALDASQVGLEV 389 Query: 407 GRYSLLDILDIER 419 G +LLD++ +R Sbjct: 390 GTRTLLDVVQNQR 402 >gi|293608597|ref|ZP_06690900.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829170|gb|EFF87532.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 510 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 77/409 (18%), Positives = 166/409 (40%), Gaps = 44/409 (10%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + VKIA+Q+N I QA + I +A +P I+ +L + G+ Sbjct: 105 TLQEAVKIAIQRNPDISQAISTLAGQNAGIDVAKAGYYPQISGGIT---TGDLSSGERGR 161 Query: 120 ----LDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERI 174 L++ + FG+ + + A L A V ++ ++ + S I+ + + + Sbjct: 162 QLLTLNATQMLYDFGKVKSGVSVEKAKLQVEQANVLVSIDDIALDVAQSIINIQRYLQLN 221 Query: 175 SIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNIS 234 IA Q + ++ E+++L+ G +S+ ++ ++ +++ +S + + R ++ Sbjct: 222 KIAEQQIAGIQRIQEIANLRANAGISSQADPIQAQSYLQAAQSGLIAQQSLLRQYQQHLR 281 Query: 235 TLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIR-----NRPDIRYQEKKLADSV 289 TLLG + +I I DL++ P+ K +A + Sbjct: 282 TLLG--------------GDVSRTGWI-----ISDDLVKVSDLYGEPEFNTIPKMIA-AQ 321 Query: 290 AKIGIAKSD-------LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLP----IFDKG 338 A I +AK+ YP+L++ GS++ + P + + L + G Sbjct: 322 AGIEVAKAQKEQTRLTRYPTLAVKGSVSQAINGKNPNNDEDDGLYSSIMLEATSQFYQGG 381 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + S ++ A + + L+ + ++ + I ++ + L + ++ Sbjct: 382 AVSSQVKMASYAEEAAKSKVNSVYLDVLDQIRTSREQIENKQRQMQVLANRQATTVRTRE 441 Query: 399 LSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 L Y+ G SL+D+L+ E+A +L A+ + S V A G Sbjct: 442 LYQEQYKLGTRSLVDLLNAEQAIHSANSELETARYDIYSSIVQYIAATG 490 >gi|255011797|ref|ZP_05283923.1| putative outer membrane protein [Bacteroides fragilis 3_1_12] gi|313149635|ref|ZP_07811828.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138402|gb|EFR55762.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 484 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 4/151 (2%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPG-YNTHWSFGPK 329 NRP+IR E KI + +S+ PSL+L G+ +T+ NSF + W+ G Sbjct: 304 NRPEIRSLELATKIYQQKINVTRSEHLPSLALMGNYMVTNPSVFNSFENKFKGMWNVGIM 363 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L LPI+ G+ ++ A++ A+ ++ +V + +NE K +T + Sbjct: 364 LQLPIWHWGEGLYKVKAAKAEARIAQYQLEDAKEKIELQVNQSAFKVNEAAKKLTMAKKN 423 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERA 420 +E +++ + + + +G + ++L+ A Sbjct: 424 LEKADENLRYATLGFEEGVIAPSNVLEAHTA 454 >gi|194335883|ref|YP_002017677.1| outer membrane efflux protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308360|gb|ACF43060.1| outer membrane efflux protein [Pelodictyon phaeoclathratiforme BU-1] Length = 423 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 13/181 (7%) Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + +A +I + N+ L +L++ G SL + EA++ + ++ + Sbjct: 147 QELVGLAGEIAARRQNNVRLINLRYQGGREHIGSLRQAEADLAQAQFEVSQARRGLVFAQ 206 Query: 231 HNISTLLGYPATEFLH-YMQKQSNNF---QPNLYIPINIGIPADLIRNRPDIRYQEKKLA 286 +++ LG + L + Q+ +F +P+L + L +N P + + K Sbjct: 207 TTLASALGRDNHQPLKVHGAFQATDFSAAKPDLAL---------LAKNNPFFQQLDTKSK 257 Query: 287 DSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 + + +AKS P L L SI + P W+ G + +PI++ G ++ + + Sbjct: 258 AARYDLAVAKSAFLPQLYLTSSIGSGSVDRLPFDAVDWNAGVTVSVPIYEGGSGQAKVAK 317 Query: 347 A 347 A Sbjct: 318 A 318 >gi|212711185|ref|ZP_03319313.1| hypothetical protein PROVALCAL_02257 [Providencia alcalifaciens DSM 30120] gi|212686353|gb|EEB45881.1| hypothetical protein PROVALCAL_02257 [Providencia alcalifaciens DSM 30120] Length = 460 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 27/169 (15%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNGSIALT----HDNSFP-------GYNTHWSFGPKL 330 +LA V++ I +A++ P++ L+ S ++ H + + YN S G L Sbjct: 249 RLAQDVSRENIRLAETGHMPTVGLDASTSVANTYNHGSGYDRTGGASNNYNGQNSIGLTL 308 Query: 331 YLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKE----VENALTSINEDKKIV 383 LP++ G + S + +A+ SA EQ + V+ ++ V ++++SIN K++V Sbjct: 309 SLPLYSGGAVSSQVEQAQYGFQSASEQLESVYRNVIQLVRSSYNNVTSSISSINAYKQVV 368 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 Q +++ + Y+ G +++D+L A + + +LS A+ Sbjct: 369 VSAQSSLDAMEAG-------YQVGTRTIVDVLTATTALYQAKQNLSNAR 410 >gi|153809408|ref|ZP_01962076.1| hypothetical protein BACCAC_03722 [Bacteroides caccae ATCC 43185] gi|149127994|gb|EDM19216.1| hypothetical protein BACCAC_03722 [Bacteroides caccae ATCC 43185] Length = 439 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 61/290 (21%), Positives = 129/290 (44%), Gaps = 38/290 (13%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L Y+D ++ + + LDL ++ I + TQG K + + E + ++++ + Sbjct: 148 LTGYYLDLYKLNNQVQVLQKNLDLTEQVIRNMEARRTQGTALKNDITRYELQKETLKLQL 207 Query: 220 PTLEKSFRMNVHNISTLLGYPA-TEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + ++ H + T L PA TE + + ++ N + L+ ++ Sbjct: 208 AKVQDACKIMNHQLVTTLHLPAGTEIIPDSTLLDEEVKALAENDW---------QLLASQ 258 Query: 276 PDIRYQEKKLADSVA--KIGIAKSDLYPSLS------LNGSIAL---THDNSFPGYNTHW 324 ++ Q+ +LA ++ K+ + +S+L P ++ L+G I + DN+F +W Sbjct: 259 SNVGLQQAQLAMKMSEQKVKLERSELLPKIALVAGEHLDGPITIEVPVLDNNF----NYW 314 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIK-EVENALTSINEDK 380 G + + K +R+A+ AQE+Y QE + N ++ N LTS + Sbjct: 315 YVGVGIKYNLSSLFKNNKKVRQAKLNMRKAQEEYSLAQEQIENGVQANYVNFLTSFTD-- 372 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 + + +VEL ++ ++ Y+ L D+LD + K+ DL + Sbjct: 373 --LRTQEKSVELANQNYDVTSNRYKNDLALLTDMLDA--SNMKLSADLGL 418 >gi|311747557|ref|ZP_07721342.1| putative outer membrane efflux protein [Algoriphagus sp. PR1] gi|126575539|gb|EAZ79849.1| putative outer membrane efflux protein [Algoriphagus sp. PR1] Length = 439 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 84/414 (20%), Positives = 163/414 (39%), Gaps = 33/414 (7%) Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNST 117 D SL+++++ AL + I Q+ I + A FP S + L+T Sbjct: 32 DISLDQVLEYALLNSPLIRQSQIDEEIGDHEIKASLAGWFPQVDVSAGGNYNIKLQTQVI 91 Query: 118 GQ----LDSDWKIDLFGQRRHIESSLANLDSAYAQ-------------VDIAKLNVISKL 160 G W ++ Q + +L N D +A ++ ++N I ++ Sbjct: 92 GDQLITFGQPWNSNVLFQ---VNQTLFNRDQLFASKSSKYYREQLEDAIENTRINTIVEV 148 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIP 220 +Y D E+++I + + +K ++ + ++ G K + + + ESD+ Sbjct: 149 SKAYYDILLAGEQLNILKENIGRLQKQLQDAKNRYESGLVDKTDYQRASIALSNEESDLN 208 Query: 221 TLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 +E SF+ + L+GYP E + +Y+ ++ NR + Y Sbjct: 209 RVETSFKAKYAYLKQLMGYP-DELDFTLVFDREEMISEIYMD---DTEPLILENR--VEY 262 Query: 281 QEKKLADSVAKI--GIAKSDLYPSLSLNGSIA-LTHDNSFPG-YNTHW---SFGPKLYLP 333 Q + ++ +I K + P LS N L + SF YN + S G L LP Sbjct: 263 QIMQTQQTLTEIQSSYEKWNYLPELSANYRYNWLYFNESFSNLYNQAYPTSSVGLTLSLP 322 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 IF G+ +R A + I Q E E AL+ ++ +E+ Sbjct: 323 IFKGGERNHRVRVANLQVERGAIDLQNLGSQIRTEYEVALSDYQSSIYEWENIRENMEMA 382 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 ++ + + Y +G + ++++ E +++ A Q+ +S +DL A+G Sbjct: 383 EEVYDIIKLQYDEGIKAYVELVVAESDLRTAQINHLNAIFQVLESKLDLQKALG 436 >gi|58580550|ref|YP_199566.1| hypothetical protein XOO0927 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622508|ref|YP_449880.1| outer membrane protein RaxC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|22023555|gb|AAM89123.1|AF389911_1 outer membrane protein RaxC [Xanthomonas oryzae pv. oryzae] gi|58425144|gb|AAW74181.1| TolC protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366448|dbj|BAE67606.1| outer membrane protein RaxC [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 459 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 40/209 (19%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--------DNSFPGY 320 A I + P +R Q+ +++ + A + A++ P+L+L+GS+ T+ D + + Sbjct: 238 ATAIADNPALRAQQLQVSAAEAHVSAARAGHLPTLNLSGSMGRTNSWGGGSDVDTAAGNF 297 Query: 321 NTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------E 360 T+ S G L +PIF G +S +R+A S Q ++ + Sbjct: 298 MTNNGNIDTNSIGITLSIPIFSGGATQSAVRQALSQRDIQQDIYEQQKRALDRNTRNAYQ 357 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYS 410 TV+ I EVE ++ + Q +E+ +++++ + +NY Q RY+ Sbjct: 358 TVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYT 417 Query: 411 LL-DILDIERATAKVEV-DLSIAKRQLAK 437 L + L + +A K+++ DL R L++ Sbjct: 418 FLQNRLLLGQAIGKLDITDLQDVNRLLSQ 446 >gi|294101491|ref|YP_003553349.1| outer membrane efflux protein [Aminobacterium colombiense DSM 12261] gi|293616471|gb|ADE56625.1| outer membrane efflux protein [Aminobacterium colombiense DSM 12261] Length = 424 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 24/291 (8%) Query: 136 ESSLANL--DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 E S+A L +SA + V + +Y DA ++ + +A + L+LY + + Sbjct: 113 EKSIARLKKESASQNYKTIECQVQYNVKKTYFDALEAQKDLEVAEETLNLYTLLLTQAQA 172 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + G+ K + E E + T + + + ++ +G TE Y+ K Sbjct: 173 FYDVGSVPKYDVTTAEVEQSKARLGVVTAKTAIKKARAELNNAMG--VTEAPEYVLK--- 227 Query: 254 NFQPNLYIPINIGIPADLI-----RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 ++ ++ IP D + R R D+ E + + I +A P + +G Sbjct: 228 ----DVEERVSFSIPFDEVLKTALRKRADLLASEIGVKAAKESIRLAAKGNAPEVRASGK 283 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLPIFDKG--KIKSNIRRAESSAQEQYITWQETVLNAI 366 A+ S P + +WS G L +P++D G K N RAE E +E++ + + Sbjct: 284 YAI--GGSHPTEDDNWSVGVTLQIPLYDGGLEGEKINQARAELVVAE---GEEESLRSDV 338 Query: 367 -KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILD 416 KEVE A + +++ Q V+ +++++++ Y+ G S +++ D Sbjct: 339 RKEVEQAYMEFIDSDEVLAVAQKTVQQAEENLTIAQNRYKVGVGSPIEVAD 389 >gi|254501803|ref|ZP_05113954.1| type I secretion outer membrane protein, TolC family [Labrenzia alexandrii DFL-11] gi|222437874|gb|EEE44553.1| type I secretion outer membrane protein, TolC family [Labrenzia alexandrii DFL-11] Length = 501 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKL 330 +N P IR + + D+ P +SL G + + F + + G ++ Sbjct: 262 FQNNPSIRAAMNDARAARYAARASVGDMLPRVSLEGEWSNGYRRDFSDRDREDYRLGIRV 321 Query: 331 YLPIFDKGKIKSNIRRAE-SSAQEQY---ITWQ---ETVLNAIKEVENALTSINEDKKIV 383 P F G+ ++++RA+ ++AQE+Y T Q E V+ A+K+ A + Sbjct: 322 TAPFFTGGRNIASVKRAKYTAAQEEYELDDTQQIIRENVIRAMKQRAAARLRAKAGVR-- 379 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 A+E +K+++ + + G+ +LL++LD ER +VD Sbjct: 380 -----AIEANKRAVKGLQVEFESGQRTLLNVLDGERELLLSQVD 418 >gi|188578507|ref|YP_001915436.1| outer membrane protein required for AvrXa21 activity C (raxC) [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522959|gb|ACD60904.1| outer membrane protein required for AvrXa21 activity C (raxC) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 443 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 40/209 (19%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--------DNSFPGY 320 A I + P +R Q+ +++ + A + A++ P+L+L+GS+ T+ D + + Sbjct: 222 ATAIADNPALRAQQLQVSAAEAHVSAARAGHLPTLNLSGSMGRTNSWGGGSDVDTAAGNF 281 Query: 321 NTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------E 360 T+ S G L +PIF G +S +R+A S Q ++ + Sbjct: 282 MTNNGNIDTNSIGITLSIPIFSGGATQSAVRQALSQRDIQQDIYEQQKRALDRNTRNAYQ 341 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYS 410 TV+ I EVE ++ + Q +E+ +++++ + +NY Q RY+ Sbjct: 342 TVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYT 401 Query: 411 LL-DILDIERATAKVEV-DLSIAKRQLAK 437 L + L + +A K+++ DL R L++ Sbjct: 402 FLQNRLLLGQAIGKLDITDLQDVNRLLSQ 430 >gi|224584540|ref|YP_002638338.1| type I secretion protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469067|gb|ACN46897.1| putative type I secretion protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 469 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 26/195 (13%) Query: 261 IPINIGIPADLIRN---------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 +P++ P +L N P IR KL +I +AKS YP +S Sbjct: 50 LPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGV---- 105 Query: 312 THDNSFPGYNTHWSFGPKLYLPI----FDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 +N + T + P L LP+ +D GK+ S +R + A +Q ++ Sbjct: 106 --NNGYSNTYTDHGYSPSLVLPVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAH 163 Query: 368 EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 E NA+ +++V + + L +G SL D++ E A++E Sbjct: 164 ETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTE---ARIES- 219 Query: 428 LSIAKRQLAKSYVDL 442 A+ QLA+ +L Sbjct: 220 ---ARSQLAQYQANL 231 >gi|116696345|ref|YP_841921.1| cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] gi|113530844|emb|CAJ97191.1| Cation/multidrug efflux system outer membrane porin [Ralstonia eutropha H16] Length = 423 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 68/353 (19%), Positives = 154/353 (43%), Gaps = 23/353 (6%) Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQ 131 + T+ A + ++A + ++ R + P+ ++S ++TGQ++ I+L G+ Sbjct: 60 SFTLSAAGKELDATEGDVTQAR--VLPNPELAVSMEDTRKATRSTTGQIN--LPIELGGK 115 Query: 132 RR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 R I + + A A++ A+ + + +I + +ER+ +A + + K Sbjct: 116 RAARIGVAERGRELAQAELGGARAELRAAVIARFFGVLVAQERVKLAEGSVGIASKAAAA 175 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQK 250 + + G + L + E + E ++ + + +++ L G H+ Q Sbjct: 176 AGRRVAAGKVAPLEETRARVEQANAELELAEATGALQSARQSLAALWG---NAVPHFAQA 232 Query: 251 QSN-NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 Q + + P+ P + + + P + S A++ +A+S YP +++ S+ Sbjct: 233 QGDLDALPSRPAPAALQAALE---DSPQLAASRLVAERSRAEVAVARSRQYPDVTV--SL 287 Query: 310 ALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVLNAIK 367 DN G + LP+FD+ G + + +RRA+ AQ+ T T + Sbjct: 288 GAKRDNE--ANRGMAVLGVAIPLPLFDRNQGNLYAALRRADK-AQD---THAATRIRLAG 341 Query: 368 EVENALTSINEDKKIVTKLQHAV-ELHKKSMSLSMINYRQGRYSLLDILDIER 419 E++ A T ++ + LQ +V +++ + + + G+++ LD+LD +R Sbjct: 342 ELQQASTQLSVSRAAAQTLQASVLPAAEQAYAAASRGFEAGKFNFLDVLDAQR 394 >gi|12484564|gb|AAG09627.1| CztC [Pseudomonas fluorescens] Length = 406 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 58/302 (19%), Positives = 136/302 (45%), Gaps = 25/302 (8%) Query: 126 IDLFGQR-RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ++L G+R I+ + D+A ++ + ++ + +I SY A +ER+ +A + + L Sbjct: 89 LELGGKRGARIDLATRAQDAAALTLEQRRNDLRADVIDSYYGALRAQERLDLAQRSVALA 148 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 ++ + +++ + G +S + + + ++ I ++ + ++ + G A +F Sbjct: 149 ERGLVVANGRVRAGKSSPVEATRAQVQVSQIRLEMDRAQIGLSDAYRRLAAITGSAAPDF 208 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 + QS + P +P + A L + +R E + + A +G+ K+ P L Sbjct: 209 -QAVATQSQSAPP---LPAFTPLLARLEQT-TQLRLAELHIQQNEASVGLEKAQRIPDLD 263 Query: 305 LNGSIALTHDNSFPGYNTHWSF-GPKLYLPIFDK--GKIKSNIRRAESSAQEQYIT---W 358 + SI +D G + G + +P+F++ G + + RRA+ + + T Sbjct: 264 V--SIGSQYD---AGVRERVNLVGVSMPIPLFNRNQGNVLAASRRADQARDLRNATELRL 318 Query: 359 QETVLNAIKEVENALTSINE-DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDI 417 + A+ + A T + +++I+ Q AV+ + + G+++ LD+LD Sbjct: 319 RTETRQALDLWQTANTEVRAFNQQILPAAQSAVDSATRGFEM-------GKFNFLDVLDA 371 Query: 418 ER 419 +R Sbjct: 372 QR 373 >gi|299140943|ref|ZP_07034081.1| outer membrane efflux protein [Prevotella oris C735] gi|298577909|gb|EFI49777.1| outer membrane efflux protein [Prevotella oris C735] Length = 447 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 78/383 (20%), Positives = 157/383 (40%), Gaps = 25/383 (6%) Query: 67 IALQQN-LTILQATERINAAKENIL---------SVRADLFPSSYASI--SHRFIPNLKT 114 I LQ+N LT + ATE I ++ +L +V + +P S +SI +R ++ Sbjct: 40 ITLQKNRLTKVSATEDIKESQAALLPSLSFSTSQNVSYNPWPQSNSSIVAGNRVQSSVDK 99 Query: 115 ---NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK-LNVISKLIPS-YIDARH 169 N + L ++W + G R H + L A + +A N +++ I ++ + Sbjct: 100 AYYNGSYSLSTNWTV-WNGNRNHNQVKLNKYAEQQADLTVATYANSLTEQISQLFVQILY 158 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E I + + L KN E F G SK L +L A+ E + E + + Sbjct: 159 SDEAIKVNRESLSTSTKNEERGKEMFNVGKMSKADLAQLTAQRAQDEYAVVQAESNLKEY 218 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + LL E ++ + IP + + RP+I+ E + S Sbjct: 219 KRQLKQLLQLTNGEDFDVTVPETTDEMALEQIPTLNSVYDQAVAMRPEIKNAELGVESSE 278 Query: 290 AKIGIAKSDLYPSLSLNGSIAL-THDNSFPGY------NTHWSFGPKLYLPIFDKGKIKS 342 I +AK+ P++ ++ ++ T + G+ N G + +P+FD + K+ Sbjct: 279 LNIKMAKALRLPTVGVSAGVSTNTTSMNKSGWDRQMKNNFTLGGGINISVPLFDNRQAKT 338 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + +A+ Q + ++ +EN N ++ + + + E K+S +L Sbjct: 339 AVTKAQIQRQNYLLDLKDKQTALYSAIENYWLQANNNQSMFKSARISTESAKESYNLLSE 398 Query: 403 NYRQGRYSLLDILDIERATAKVE 425 +R G +++++++ + K E Sbjct: 399 QFRLGLKNIVELMNGKDQLLKAE 421 >gi|145218880|ref|YP_001129589.1| outer membrane efflux protein [Prosthecochloris vibrioformis DSM 265] gi|145205044|gb|ABP36087.1| outer membrane efflux protein [Chlorobium phaeovibrioides DSM 265] Length = 454 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 80/418 (19%), Positives = 166/418 (39%), Gaps = 41/418 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHR---------- 107 +LN ++ + + + QA E +NAA+ R+ +P S+ A S+R Sbjct: 44 TLNNALQRVRENSPRLRQARENLNAAEARTEGSRSGWYPHLSAIADYSYRDPISEYQGMK 103 Query: 108 FIPNLKTNSTGQLDSDWKIDLFGQR-------RHIESSLANLDSAYAQVDIA--KLNVIS 158 F+P N+ ++ ++ + FG+ R E + ANL + + D+A + V Sbjct: 104 FMPANSYNA--RVGAEMTLLDFGRTAKGVSIARSSEKA-ANLSLSLTERDLAYTTIQVFH 160 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ +E + + + + +KN+E + ++ +G ++ L+ E + S + Sbjct: 161 TML-------FLREAVLVQEKEIAALEKNLEYTRTRYREGVATRFDLLSTEVRLASAVTK 213 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDI 278 LE +S L G P E + +F + R ++ Sbjct: 214 KTDLESELANQSIALSRLCGLPEDEPVGV----EGSFASVEQGEEESSFVVSALEKRLEL 269 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF----PGYNTHWSFGPKLYLPI 334 R + ++ K +A+ P ++ G+++ N F + + G ++ LP+ Sbjct: 270 RLAGEHERTAIRKTELAERACLPVIT--GNLSWGTANGFLPDLEEMRPNTAAGVRMELPL 327 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F + +S R A + + +T +EV +L S+ ++ + V+ + Sbjct: 328 FTGFRSRSEKRAALAMQRAAGAERLDTDQQIRQEVRQSLNSLRASRQNIATTTLQVKQAE 387 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 + + YR G + LD+LD E + A+ E+ A+ L + L A G P Sbjct: 388 LAAEHARTRYRNGLATALDLLDTEASLAEAELSNLQARYTLVMNTYALKRAAGEPLEP 445 >gi|329964737|ref|ZP_08301791.1| outer membrane efflux protein [Bacteroides fluxus YIT 12057] gi|328525137|gb|EGF52189.1| outer membrane efflux protein [Bacteroides fluxus YIT 12057] Length = 442 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 9/294 (3%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 NL +A A ++ AK ++ + +Y+ +E +A L K+ + + G Sbjct: 127 NLKAAIADLEKAKEDISINIASAYLQVLFNEELHQVALGQAQLSKEQYDRIYRLAEIGKA 186 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY 260 S + + ++ + E ++ ++++ + ++S L+ E N +L Sbjct: 187 SPAEVAEAKSRVAQDEMNVVQALNNYKLALLDLSQLIELETPEGFALAAPAVNLELASLT 246 Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNS 316 P I A + N+P I+ +L S I IA+S+ YP LSLNGS+ + D + Sbjct: 247 PPDEIFQTA--LVNKPSIQAARFRLEGSKHNIRIAQSNFYPQLSLNGSLGTNYYSTIDRT 304 Query: 317 FPGY---NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENAL 373 F N G L +PIF++ ++ +R A + + T KE++ A Sbjct: 305 FSQQMSDNFSKYVGFNLSVPIFNRLATRNRVRTARLQRENYALQLDNTKKILYKEIQQAW 364 Query: 374 TSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD 427 + T A ++S L Y G+ + ++ + ++ K + D Sbjct: 365 YKATAAESQYTSSHTAALASEESFKLMSEKYENGKANAVEYNEAKQNLMKAQSD 418 >gi|124010394|ref|ZP_01695038.1| outer membrane efflux protein [Microscilla marina ATCC 23134] gi|123983516|gb|EAY23987.1| outer membrane efflux protein [Microscilla marina ATCC 23134] Length = 818 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 92/474 (19%), Positives = 175/474 (36%), Gaps = 88/474 (18%) Query: 44 LINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS 103 LIN D N L ++ A++ NL + A + + + NI + +++L P S Sbjct: 344 LINEDKQNIGRKVN---LKQVADEAIKANLELKVAQQNVASGFTNIRNAQSNLRPRVEVS 400 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-----SSLANLDSAYAQVDI------- 151 S R I D D FG + S L S AQ ++ Sbjct: 401 ASGRMI-----------DKDRAASSFGNQPEYATIGSVSFTQVLLSPKAQGNVNVQRQLQ 449 Query: 152 ---------AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 +L+V+ + SY++ K +I L L ++N+EL+ + G + Sbjct: 450 QGREHQRQQTRLDVVLQATQSYLNILRAKTLENIQKDNLRLTRRNLELARTRKAVGYSGP 509 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATE------------------- 243 L + E++I + D+ + ++ N++ LL P E Sbjct: 510 SDLYRWESQIALTKKDLIDTQAQLKLAAINLNQLLNRPINEEFVAEEINLKNSSLIVANP 569 Query: 244 -FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVA-KIGIAKSDLYP 301 HY+ P Y + + + IRN P+I+ + +A + ++ + + P Sbjct: 570 QIFHYIDN------PKKYQILGDFLVEEGIRNLPEIKQLDAAIAAQKSLRLLTRRQNYTP 623 Query: 302 SLSLN-------------------------GSIALTHDNSFPGYNTHWSFGPKLYLPIFD 336 +++L G++ L+ + S P +W G K LPI + Sbjct: 624 TIALQAGADYLFYRGGEGVGAPSIVIPSAAGNVNLSDNFSSPD-KLNWQVGVKASLPIIN 682 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKS 396 G+ ++ +++ + Q+ +L + + +L + Q A + K+ Sbjct: 683 GGQRRAELQKTNIEILKMEAQKQDLILKLKQRIMASLALTRAAYSSIQLTQAAEKAASKN 742 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 L Y +G S++ ++D + A K E S A + + L A GS Y Sbjct: 743 FDLVQDAYSKGVVSIIQLIDAQNAAIKSEQFASNAVYEFIIQLLALERAKGSYY 796 >gi|71275213|ref|ZP_00651500.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Dixon] gi|71899566|ref|ZP_00681722.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Ann-1] gi|170731208|ref|YP_001776641.1| outer membrane export factor [Xylella fastidiosa M12] gi|71164022|gb|EAO13737.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Dixon] gi|71730695|gb|EAO32770.1| Type I secretion outer membrane protein, TolC [Xylella fastidiosa Ann-1] gi|167966001|gb|ACA13011.1| outer membrane export factor [Xylella fastidiosa M12] Length = 452 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 49/253 (19%), Positives = 104/253 (41%), Gaps = 25/253 (9%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 K+ + + + G + L + A +D T + + ++ + G P T+ Sbjct: 157 KRQFDYAQKRLEVGLSPITDLHEARASYDQARADTITARNTLQDYYQALAEITGQPVTDL 216 Query: 245 LHYMQKQSNNFQPNLYIPINIG----IPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + +F+P +P + + I N P ++ Q+ ++ + + I A+ + Y Sbjct: 217 RGLPE----DFRPE--VPAKFSNIDQLVTEAISNNPSLKAQQLQVNAAESSISAARGEHY 270 Query: 301 PSLSLNGSI--------------ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 P+LSL+GS+ AL D P +T+ + L +P+F G +S +R+ Sbjct: 271 PTLSLSGSLGKSKAWGSSSGAMSALIPDRDQPISDTN-NLQLTLSIPLFAGGATQSRVRQ 329 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 A + Q +++ + NA ++ V + AV + ++ S + Sbjct: 330 AIAQRDIQQDNYEQNKRTLNRNTRNAYQNMIAGISEVEARRLAVVSAQAALDASQVGLEV 389 Query: 407 GRYSLLDILDIER 419 G +LLD++ +R Sbjct: 390 GTRTLLDVVQNQR 402 >gi|281424324|ref|ZP_06255237.1| outer membrane efflux protein [Prevotella oris F0302] gi|281401593|gb|EFB32424.1| outer membrane efflux protein [Prevotella oris F0302] Length = 447 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 79/383 (20%), Positives = 157/383 (40%), Gaps = 25/383 (6%) Query: 67 IALQQN-LTILQATERINAAKENIL---------SVRADLFPSSYASI--SHRFIPNLKT 114 I LQ+N LT + ATE I ++ +L +V + +P S +SI +R ++ Sbjct: 40 ITLQKNRLTKVSATEDIKESQAALLPSLSFSTSQNVSYNPWPQSNSSIVAGNRVQSSVDK 99 Query: 115 ---NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAK-LNVISKLIPS-YIDARH 169 N + L ++W + G R H + L A + IA N +++ I ++ + Sbjct: 100 AYYNGSYSLSTNWTV-WNGNRNHNQVKLNKYAEQQADLTIATYANSLTEQISQLFVQILY 158 Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 E I + + L KN E F G SK L +L A+ E + E + + Sbjct: 159 SDEAIKVNRESLATSTKNEERGKEMFNVGKMSKADLAQLTAQRAQDEYAVVQAESNLKEY 218 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 + LL E ++ + IP + + RP+I+ E + S Sbjct: 219 KRQLKQLLQLTNGEDFDVTVPETTDEMALEQIPTLNSVYNQAVAMRPEIKNAELGVESSE 278 Query: 290 AKIGIAKSDLYPSLSLNGSIAL-THDNSFPGY------NTHWSFGPKLYLPIFDKGKIKS 342 I +AK+ P++ ++ ++ T + G+ N G + +P+FD + K+ Sbjct: 279 LNIKMAKALRLPTVGVSAGVSTNTTSMNKSGWDRQMKNNFTLGGGINISVPLFDNRQAKT 338 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMI 402 + +A+ Q + ++ +EN N ++ + + + E K+S +L Sbjct: 339 AVTKAQIQRQNYLLDLKDKQTALYSAIENYWLQANNNQSMFKSARISTESAKESYNLLSE 398 Query: 403 NYRQGRYSLLDILDIERATAKVE 425 +R G +++++++ + K E Sbjct: 399 QFRLGLKNIVELMNGKDQLLKAE 421 >gi|295689024|ref|YP_003592717.1| TolC family type I secretion outer membrane protein [Caulobacter segnis ATCC 21756] gi|295430927|gb|ADG10099.1| type I secretion outer membrane protein, TolC family [Caulobacter segnis ATCC 21756] Length = 480 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 82/414 (19%), Positives = 167/414 (40%), Gaps = 54/414 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTN-STG 118 +L + +A Q N T+ Q E ++ + P+ + + KT+ TG Sbjct: 30 TLADAIALAYQTNPTLQQQRASTRITDEGVVQAKTGFRPTVGGELD---VTGSKTSPDTG 86 Query: 119 QLDSDWKIDLFGQRRHIESSL-------ANLDSAYAQVDIAK-------LNVISKLIPSY 164 +D K+ G I L ANL +A A V A+ +V+ ++ +Y Sbjct: 87 ---ADVKVSGSGATLSISQPLYTGGRASANLSAAEADVLAARESLRSVEQSVLVNVVQAY 143 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 +D R +ER+ IA + + + ++ ++ S+ +F G ++ + + +A + + ++ + + Sbjct: 144 VDVRRDQERLRIARENVAVLQRQLDESNARFDVGEITRTDVAQSQARLAAAKAGQSSAQA 203 Query: 225 SFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY--IP--INIGIPADLIRNRPDI-- 278 ++ + ++G E +P+L +P ++ A N P + Sbjct: 204 QLEVSRAAYAAVVGQTPGELAP---------EPSLATLLPPSVDQAFEAAQTAN-PGVTS 253 Query: 279 -RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD------NSFPGYNTHWSFGPKLY 331 RY E+ A VA K+ P++S S+ D + F Y+ S Sbjct: 254 ARYTEEAAAARVAVA---KAGYRPTVSARASLGYAADKRSGVGSQFDDYDRTVSGAITAS 310 Query: 332 LPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVE 391 +PIF G S +R A + +AI++V NA +++ + + + V Sbjct: 311 IPIFTGGLTTSQVRAATERENAARSATESAKRSAIQQVSNAWSNLLASRANLVSNEEQVR 370 Query: 392 LHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 + + + G + LD+L+ +++LS A+ L + D Y+A Sbjct: 371 ATRIAFEGVRQEQQVGLRTTLDVLN-------AQLELSNAELALVGARRDEYVA 417 >gi|302878908|ref|YP_003847472.1| outer membrane efflux protein [Gallionella capsiferriformans ES-2] gi|302581697|gb|ADL55708.1| outer membrane efflux protein [Gallionella capsiferriformans ES-2] Length = 410 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 73/355 (20%), Positives = 149/355 (41%), Gaps = 38/355 (10%) Query: 102 ASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIE-SSLANLDSAYAQVDIAKLNVISKL 160 A SH P+ +T + ++ G R + ++ A + S A +D A++N+ ++L Sbjct: 71 AGTSHLLPPSAQTGRNSAMSISQPLEFPGLRSARQRAAQAGITSGAALLDDARVNLYAQL 130 Query: 161 IPSYIDARHFKERISIA---HQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 ++ + ++ ++ H +L + ++L + G + + LVK +AE + E+ Sbjct: 131 KLAFFEVLRRQDEATLTAENHALLLQIRNRVKL---RVEVGESPRYELVKSDAESLTAEN 187 Query: 218 DIPTLEKSFRMNVHNISTLLGYPAT---EFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 T E + LLG P E +H M K S P L + + A+L+++ Sbjct: 188 AAKTAELRVVQAKDRLRVLLGAPLDDQFEIVHVMPKISEP--PELSV-----LRAELLQS 240 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 +P ++ + + AK+ +S P +L P N W + LP+ Sbjct: 241 QPLLKAAIAESERAEAKLEQERSLRIPQPTLKWGA-----ERHPDVNL-WRVSVAMPLPL 294 Query: 335 FDK-----GKIKSNIRRAESSAQEQYITWQETV-LNAIKEVENALTSINEDKKIVTKLQH 388 +++ G+ +N RA + QE + L + E++ A ++ + + Sbjct: 295 WNQRAGPVGEAHANRERA--------LAEQERIRLGLLGELDQAYGRYQIARRQMNVFEK 346 Query: 389 AVELHKKS-MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 + +S + ++ YR G +LD LD +R +D A+ +L + VD+ Sbjct: 347 GLMRDAESALKVAEAAYRYGERGILDYLDAQRVYRSTRMDYLNARYELQFALVDI 401 >gi|153805855|ref|ZP_01958523.1| hypothetical protein BACCAC_00094 [Bacteroides caccae ATCC 43185] gi|149130532|gb|EDM21738.1| hypothetical protein BACCAC_00094 [Bacteroides caccae ATCC 43185] Length = 443 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 72/396 (18%), Positives = 161/396 (40%), Gaps = 38/396 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRFIPNLKT--- 114 +L ++I + NL++ I +K + RA L P S+ A S+ F P + Sbjct: 27 TLEDCLRIGIDNNLSLESKRREIQKSKYGVSENRARLLPQISAVAGYSNNFDPPVSVTDG 86 Query: 115 -------NSTGQLDS------DWKIDLFGQRRHIESSLANLDSAYAQVDIAKL--NVISK 159 N T L + ++ LF Q + S+A + +++ K ++I + Sbjct: 87 SSYGVPYNITQTLQHSANAGLEMQMPLFNQTLYTSMSIAKVVEEISRLSYGKAREDIILQ 146 Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 + Y + E+I + + ++ +++ F G + ++ L ++ +++++ Sbjct: 147 ISKMYYLGQVTAEQIVLIKANITRLEELRDITRAFFDNGMSMEVDLKRVNINLENLKVQY 206 Query: 220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIR 279 + + ++ + ++ YPA + + P I L N +++ Sbjct: 207 DNAQAMMKQQLNMLKYIMDYPAEKEIA--------LTPVNTDSITTVALTGLSENLYELQ 258 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGS--IALTHDNSF----PGYNTHW----SFGPK 329 + +L + + + + PSLSL G+ A D + G + HW G Sbjct: 259 LTQSQLELAERQKRMITNGYIPSLSLTGNWRYAAYTDKGYHWFHSGPSNHWFRSYGLGLT 318 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 L +PIFD IR+A + + + W++T N + NA+ + +++ K + Sbjct: 319 LRIPIFDGLDKTYKIRKAMIDIENRKLAWEDTRKNLQTQYLNAVNDLMNNQRNFKKQKDN 378 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE 425 L + +++ YR+G S+ ++L E ++ + Sbjct: 379 YLLAEDVYAVTSDRYREGIASMTEVLQDEMQMSEAQ 414 >gi|298370180|ref|ZP_06981496.1| type I secretion outer membrane protein, TolC family [Neisseria sp. oral taxon 014 str. F0314] gi|298281640|gb|EFI23129.1| type I secretion outer membrane protein, TolC family [Neisseria sp. oral taxon 014 str. F0314] Length = 440 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 79/388 (20%), Positives = 154/388 (39%), Gaps = 34/388 (8%) Query: 83 NAAKENILSVRADLFPSSYASISHRFIP-NLKTNSTGQLDSDWKID---------LFGQR 132 +A E RA+L P A+ +++ P +L +N+ + W + LF Q Sbjct: 48 DAESEKKNQARAELLPQVNANATYQKQPYSLSSNTQSR---GWNVQATQVLFDRSLFAQY 104 Query: 133 RH--IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 + I + +A+ Y D ++NV +Y D K++++ + Y + ++ Sbjct: 105 KQGKINAEMADA-RLYGSEDELRINVAK----AYFDILLNKDKLAAITEEKSAYARQLQR 159 Query: 191 SHLKFTQGATSKLSLVKLEAEI-KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQ 249 + F QGA + L + ++ ++ +I TL + ++ + ++ L G ++ Sbjct: 160 AQEMFKQGAATILDTNEAKSGYDAALAKEISTLAQ-LQVAENTLANLTGLDPSQISPV-- 216 Query: 250 KQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI 309 K N L A ++ P+ + Q K L ++ + AK P+L++NG Sbjct: 217 KSDKNLADFLGESQEQEWQALAEQHNPEWQLQRKTLENATQAVKAAKGSRLPTLTVNGGY 276 Query: 310 ALTHDNSFPGYNTHWS----------FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ 359 H Y S F +L +P+F GKI S IR A + + Sbjct: 277 QDDHSTYRQEYYGGSSDLTYRSKGGMFNVQLRVPLFTGGKISSQIREAVAREMQNKDLLT 336 Query: 360 ETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 T EV A + K Q +E ++ + +++ + G + L+ ++ Sbjct: 337 ATERKVQLEVRQAYQTTRSSKIQTLAQQRLLESNQAKLEATLLGRQVGVRNNLEETQAQQ 396 Query: 420 ATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 A E L+ AK ++Y+ L + G Sbjct: 397 EKADAEQKLAEAKYTYIQAYLKLLQSAG 424 >gi|116329362|ref|YP_799082.1| TolC family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122106|gb|ABJ80149.1| TolC family protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 518 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 59/300 (19%), Positives = 133/300 (44%), Gaps = 17/300 (5%) Query: 137 SSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFT 196 +LAN+ A+ + +L + ++ +Y + KE I + + +DL +K I F+ Sbjct: 203 GALANVRMNEAKYESGRLYL--EIAQAYYNILQLKEVILLEEKKIDLVRKMILEKRRLFS 260 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G ++ L + EA+ E+++ + + + +L+G + K Sbjct: 261 LGKITRADLSRAEADFSRSEANLEDFKYQLKQAEMALESLVGVGERGLRLSIPKGV---- 316 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS 316 + IP N+ +P + I R D+ ++ L + + A PS++LN + N+ Sbjct: 317 --ISIPQNL-LPEEKIAKRYDVIAAKENLKMAELNLKKAWGGHLPSVTLNNYYTIPEHNT 373 Query: 317 FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 P N + + +P+ G I + +++AES+ ++ + + A E+ A S Sbjct: 374 TP--NKDITMQLSINVPLLSAGTITAGVKQAESAVRQAELQLSQAKRIATDEIRKAYESS 431 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-VDLSIAKRQL 435 ++++ A+ S+ ++ + R+G +S + +E T+++ +D IA R++ Sbjct: 432 RNSARLLSLYLKAL----NSVESNLSSQRRG-FSFKTVSRLELLTSEISFLDSEIAYRKV 486 >gi|315224199|ref|ZP_07866039.1| outer membrane efflux protein [Capnocytophaga ochracea F0287] gi|314945932|gb|EFS97941.1| outer membrane efflux protein [Capnocytophaga ochracea F0287] Length = 448 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 43/187 (22%) Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK----------- 329 ++K+L D K+ ++ LYPSL+L + GY S GPK Sbjct: 268 KQKQLLDLNTKV--QRAALYPSLALQATY---------GY---LSMGPKTPIIYGKKDKV 313 Query: 330 -----------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 L +PIF ++ IR+A+ +Q T ++T L ENA + + Sbjct: 314 YGADYSAITLGLKIPIFSGFGTRAKIRQAQIESQALEATLKDTRLAMDLAYENAHSRLTN 373 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-------VDLSIA 431 + + + V+L ++ + + NY+QG SL D+L+ ER+ + + +D +A Sbjct: 374 NLLTIDSQKENVKLAEEVLLNTQNNYQQGLASLTDLLEAERSLSDAKNNYTNALLDYKLA 433 Query: 432 KRQLAKS 438 + QL KS Sbjct: 434 EIQLLKS 440 >gi|304383110|ref|ZP_07365585.1| outer membrane efflux protein [Prevotella marshii DSM 16973] gi|304335796|gb|EFM02051.1| outer membrane efflux protein [Prevotella marshii DSM 16973] Length = 447 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 51/362 (14%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 +L + AL+ N+ I +++ + + +E++ +A L PS + SH Sbjct: 29 TLEDCIHYALENNIKIKKSSLQKLSTQEDMWQSKAALLPSLNFNTSHNIAYRPWPESGHS 88 Query: 109 -------IPNLKTNSTGQLDSDWKIDLFGQR-------RHIESSLANLDSAYA----QVD 150 + + N + ++++W + G R + A LDSA Q Sbjct: 89 TIANGSSVDKVYYNGSYNVNANWTV-WNGNRNKNTIKANQLAVQQAALDSATTASTIQEQ 147 Query: 151 IAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEA 210 IA+L Y+ + E I++ Q L+ K N E F G SK + +L A Sbjct: 148 IAQL---------YVQILYSAEAINVNRQSLETSKLNEERGQSMFRVGKMSKADVAQLTA 198 Query: 211 EIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD 270 + E +I E + R + LL + E + + IP + Sbjct: 199 QRAQDEYNIVAAESNLRNYKRQLKQLLQITSDEPFEVAIPTTTDEMALQEIPSLNDVYTK 258 Query: 271 LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL-NGSIALTHDNSFPGYNTHW----- 324 + RP+I+ + + S I IAK P++ L G + T + + T Sbjct: 259 ALELRPEIKSAQLAIESSNVNIKIAKGQQLPTIGLAAGFVTNTTSINSKSWGTQLKTNFD 318 Query: 325 -SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW--QETVLNAIKEVENA-LTSINEDK 380 S G + +PIFD K+ I +A S Q + +ET+L A +EN L ++N Sbjct: 319 ASAGVTVSVPIFDNRAAKTAINKARLSYQTSLLDLKDKETILYAT--IENYWLEAVNNQN 376 Query: 381 KI 382 K+ Sbjct: 377 KL 378 >gi|256820999|ref|YP_003142278.1| outer membrane efflux protein [Capnocytophaga ochracea DSM 7271] gi|256582582|gb|ACU93717.1| outer membrane efflux protein [Capnocytophaga ochracea DSM 7271] Length = 448 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 43/187 (22%) Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPK----------- 329 ++K+L D K+ ++ LYPSL+L + GY S GPK Sbjct: 268 KQKQLLDLNTKV--QRAALYPSLALQATY---------GY---LSMGPKTPIIYGKKDKV 313 Query: 330 -----------LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINE 378 L +PIF ++ IR+A+ +Q T ++T L ENA + + Sbjct: 314 YGADYSAITLGLKIPIFSGFGTRAKIRQAQIESQALEATLKDTRLAMDLAYENAHSRLTN 373 Query: 379 DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVE-------VDLSIA 431 + + + V+L ++ + + NY+QG SL D+L+ ER+ + + +D +A Sbjct: 374 NLLTIDSQKENVKLAEEVLLNTQNNYQQGLASLTDLLEAERSLSDAKNNYTNALLDYKLA 433 Query: 432 KRQLAKS 438 + QL KS Sbjct: 434 EIQLLKS 440 >gi|90411895|ref|ZP_01219903.1| putative outer membrane protein TolC [Photobacterium profundum 3TCK] gi|90327153|gb|EAS43525.1| putative outer membrane protein TolC [Photobacterium profundum 3TCK] Length = 428 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 13/172 (7%) Query: 284 KLADSVAK--IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 +++ VA+ I +A+S P+LS + +D+ G + + G L LP++ G+ Sbjct: 245 RISQDVARDNISLAESGHLPTLSFDA--GYNYDDKITGTDEGTLTAGINLDLPVYTGGRT 302 Query: 341 KSNIRRAESSAQEQYITWQETVLNA----IKEVENALTSINEDKKIVTKLQHAVELHKKS 396 S +++A Q Y++ E + + +K+V +IN + Q +V K + Sbjct: 303 TSEVKQA----QFNYVSASEDLEGSYRGVVKDVRALYNNINATIGAIRAYQQSVISAKSA 358 Query: 397 MSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 + + + G +++D+LD R LS ++ Q S + L A+GS Sbjct: 359 LEATEAGFDVGTRTIVDVLDATRRLYDANRQLSSSRYQYIISQIQLKQAVGS 410 >gi|330941820|gb|EGH44564.1| RND efflux system, outer membrane lipoprotein, NodT [Pseudomonas syringae pv. pisi str. 1704B] Length = 121 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 342 SNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 + + R E+ + +++TVLN +EVEN L + ++ Q A+ + S+ L+ Sbjct: 3 AEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTN 62 Query: 402 INYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGYN 451 Y+ G LD+++++ E LS+ + +L S V L A+G G++ Sbjct: 63 NQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIAS-VQLIAALGGGWD 112 >gi|228469725|ref|ZP_04054693.1| outer membrane efflux protein [Porphyromonas uenonis 60-3] gi|228308744|gb|EEK17470.1| outer membrane efflux protein [Porphyromonas uenonis 60-3] Length = 450 Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust. Identities = 72/401 (17%), Positives = 153/401 (38%), Gaps = 54/401 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTG- 118 +L + + A+ ++T+ +A R+ +++ + + + PS AS S + TG Sbjct: 27 TLQQCIDHAVAHSITVEEARLRLAGSEQQLSTAQHSYLPSLSASASQSVSLGRSADKTGV 86 Query: 119 ---------QLDSDWKIDLF-GQRRHIESSLA--NLDSAYAQVDIAKLNVISKLIPSYID 166 ++ D+F G R + +A NLD+A A + AK + ++ Y + Sbjct: 87 IGDQSSSSTSFGANLSWDVFSGMARPKATEIARLNLDAATAGLSYAKEQIGLQVAEGYYN 146 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 +E I +A + L L ++ + + G S+ L ++EA++ + Sbjct: 147 LLFRQELIHVADEQLKLTRETLTKTAALVRAGKWSRDKLAEVEAQLAKDSVNYLRACSDT 206 Query: 227 RMNVHNISTLLGYPATEFLHY----MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + H ++ ++ P L ++ S P L + N + RP++ Sbjct: 207 ELARHQLALIIELPDYTALQITLPDVKSLSATPAPELALA-NDALLEQARTMRPEMEQAR 265 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF---------------- 326 +L + +IG+ ++ P +S GYNT + + Sbjct: 266 LQLQVAEQQIGLEQTGYIPKVSFGA-----------GYNTGYYYILNEKLRQFNQPFGDQ 314 Query: 327 ---------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 G L +PIFD + N+ +A +Q I ++ +++ A + Sbjct: 315 MRNNGRYFIGLSLSVPIFDAMRTADNVAQARLRYSDQQIALRKVDKELTQQLYTAQINAR 374 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 + Q A E + ++ + I+Y GR S ++ + + Sbjct: 375 AAYSQIDAAQRATESAETALHYAQISYEAGRASSYELAEAQ 415 >gi|323345709|ref|ZP_08085932.1| outer membrane efflux protein [Prevotella oralis ATCC 33269] gi|323093823|gb|EFZ36401.1| outer membrane efflux protein [Prevotella oralis ATCC 33269] Length = 446 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 125/317 (39%), Gaps = 30/317 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS----HRFIPNLKTN 115 +L + AL N+++ + + +A E+I +A L PS S S +R P + Sbjct: 27 TLKNCIDYALTNNISLQKTRLQKQSAVEDIRQSQAALLPSLSFSTSQNATYRPWPQTGIS 86 Query: 116 STGQLDS---------------DWKIDLFGQRRHIESSLANLDSAYAQVD--IAKLNVIS 158 S G + S +W I G R L L A +D A +I Sbjct: 87 SQGYVQSSVDKVYYNGSYGINANWTI-WNGGRNTNTIKLNKLTEQQAAMDSATASKQLIE 145 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 ++ Y+ + E I + L+ KKN E G SK L +L A+ E + Sbjct: 146 QIAQLYVQILYSNEAIGVNKASLETSKKNEERGQSMLNVGKMSKADLAQLTAQRAQDEYN 205 Query: 219 IPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRPD 277 I E + + + LL + + +S L ++G D + +RP+ Sbjct: 206 IVQAESNLKNYKRQLKQLLQITDDDEFEVIMDESITDDMALQDIPSVGTVYDAALSSRPE 265 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI--ALTHDNSFP-----GYNTHWSFGPKL 330 I+ + + S I IAK+ P++ L+ + + T N N S G + Sbjct: 266 IQNAQLSIQSSDINIKIAKALRMPTIGLSAGVGTSTTSMNDLKWGTQLKNNFDISGGITV 325 Query: 331 YLPIFDKGKIKSNIRRA 347 +PIFD+ + K+++ +A Sbjct: 326 SIPIFDQRQAKTSVNKA 342 >gi|160900197|ref|YP_001565779.1| outer membrane efflux protein [Delftia acidovorans SPH-1] gi|160365781|gb|ABX37394.1| outer membrane efflux protein [Delftia acidovorans SPH-1] Length = 485 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF 335 P++R + ++ + A++ AK+ +P + L D NT G + +P+ Sbjct: 313 PELRQLKAEVERAQARLDGAKASRWPGVELRYGQTREPDVRL---NT---VGVSIQIPLL 366 Query: 336 D--KGKI---KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL--QH 388 D +G I S + RA + + I ++ L A KE+E A ++ T+ Q Sbjct: 367 DQHRGPIDEAASELERARLQLEGRQIELRQQTLQAWKELEMA--------RLRTQALSQG 418 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL-YIA 445 +V + ++ ++ YR G +LD+LD +R + DL A+ QL + + L Y+A Sbjct: 419 SVREAESALRVAEAAYRFGERGILDVLDAQRVLRSIRADLLDARYQLQAARIQLEYLA 476 >gi|226953236|ref|ZP_03823700.1| outer membrane protein [Acinetobacter sp. ATCC 27244] gi|226836026|gb|EEH68409.1| outer membrane protein [Acinetobacter sp. ATCC 27244] Length = 442 Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust. Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 38/270 (14%) Query: 180 ILDLYKKNIE-------LSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ILDL KK + S +F G ++ L ++ A++ ++D+ + + ++ Sbjct: 163 ILDLRKKTLTNLQRSLFESQRRFDVGMITRADLAQVLAQVAQGQADVTQAQSNLSISEAQ 222 Query: 233 ISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI----RNRPDI---RYQEKK 284 + G YP E L + + +P+ I + D I +N P + +Y EK+ Sbjct: 223 FYQITGIYP--EHLAKVDQ----------LPM-ITLSLDEILAKTKNHPALIQAKY-EKQ 268 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKIKSN 343 A+ + ++K +L+P++ L + S+ G ++ + G +L +P+FD G ++N Sbjct: 269 AAEQ--QFALSKRELWPTVMLTSRAGKQEEASYIGSESNNYMVGVQLNVPLFDDGLNRAN 326 Query: 344 IRRAESSAQ--EQYITWQETVLNA-IKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +R+A++ Q I E LN ++ L S+ ++K LQ+A++ + ++ + Sbjct: 327 VRKAQTDVDLSHQKIRSLELDLNQRVQTTYAQLLSVRQNK---NALQNAIDAAEIALLYT 383 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSI 430 + G + D+L+ E+ V+ ++ Sbjct: 384 RKEFELGTKTTFDLLNTEQKLLDVKTQKTV 413 >gi|167738333|ref|ZP_02411107.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 14] Length = 187 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 20/184 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 10 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 62 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHRFI--PNLKTNS------TGQLDSDW 124 A + ++AA+E + + + + L P+ A + R + P + GQL + + Sbjct: 63 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 122 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 123 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 182 Query: 184 YKKN 187 ++ Sbjct: 183 AREQ 186 >gi|195953165|ref|YP_002121455.1| outer membrane efflux protein [Hydrogenobaculum sp. Y04AAS1] gi|195932777|gb|ACG57477.1| outer membrane efflux protein [Hydrogenobaculum sp. Y04AAS1] Length = 423 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 95/415 (22%), Positives = 162/415 (39%), Gaps = 71/415 (17%) Query: 65 VKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDW 124 V I + N +L I+ A N L +A PS Y S I N + S + Sbjct: 39 VSIFIHNNYNVLIDKYNIDKAYANYLESKAHTNPSIYMSSVQHEIRNGELRSRDSTSNIG 98 Query: 125 KIDLF--GQRRHI---------ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 LF G +R + +SS+ D + I +++ ++I I R K+ Sbjct: 99 IAKLFRMGGKRSLNMKLNYALYKSSIFTHDDNVRNLLIGFMSLYYQVIIDKIALRQAKDD 158 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 LD Y+K ++++ + G S L KL +++S + + ++ ++ + Sbjct: 159 -------LDNYEKVLKIAKYQRDYGFISNLDYFKLSVYKVNLQSAVYQAQSQYKNDLKQL 211 Query: 234 STLL----------GYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEK 283 TL+ GYP L N +PNL +L NR DI+ Sbjct: 212 KTLMRIKKPIRLKAGYPVAFLL--------NQKPNL------KKYEELALNRFDIKAARY 257 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSI-ALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKI 340 +L + + K+ P L+ N I + D+ Y G LPIFD+ G I Sbjct: 258 QLQSDLYNLKFQKAQNIPDLTFNFEIDTVGIDSEGRRYPFMIGAGLTFPLPIFDRNVGGI 317 Query: 341 ----------KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 K ++ E++A+ Q + L+A + + E KK + K+ + Sbjct: 318 LNAAYSIKQDKLMLKNLENTAKTQTYQAYQNFLSA----QKTFRAYVEKKKEIEKI---L 370 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ--LAKSYVDLY 443 ++ +KS +L I S+LD+LD ER A Q L+++ +D Y Sbjct: 371 DISQKSFALRGI-------SVLDLLDAERTYKDFMASYRSALYQLMLSRTLLDFY 418 >gi|319760958|ref|YP_004124895.1| outer membrane efflux protein [Alicycliphilus denitrificans BC] gi|317115519|gb|ADU98007.1| outer membrane efflux protein [Alicycliphilus denitrificans BC] Length = 441 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 82/417 (19%), Positives = 165/417 (39%), Gaps = 38/417 (9%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 L VL AG + +P +P N I E+ SL + + +A Sbjct: 16 GLVFVLTAGTA-----SAQALPAVPGHSRSANGGEQI--------EAATPLSLQEAIALA 62 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDL 128 L+ NL + A I A + ++ R P S+ + P +T S + + I+L Sbjct: 63 LEGNLDLTVAQREIEAVEGQVIQGRVRPNPELAYSLEDQRTPT-RTQS---VQINLPIEL 118 Query: 129 FGQRRHIESSLANL-DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187 G+R ++ D A ++++ ++ + + ++ ++ +A ++R +A +DL KK Sbjct: 119 GGKRAARIAAAERGRDVAVEELNMRRVEIRAAVVSAFFEALAAQDRTMLAQDSVDLAKKA 178 Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247 + + T G S + K + ++ + R ++ LLG F Sbjct: 179 TDAVAKRVTAGKVSPVEETKARVAEAGVRVELAQAQSEQRSTRARLAGLLGANPPRFTQV 238 Query: 248 MQKQSN-NFQPNLY-IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 + P+L I + + L R + ++ + + LAD + +S P +++ Sbjct: 239 AGSVDDLPAVPSLDDIQQRLSASSALRRAQLEVERR-RSLAD------VERSKQTPDVTV 291 Query: 306 NGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK--GKIKSNIRRAESSAQEQYITWQETVL 363 S+ + N G + LP+FD+ G + ++R + + E Q L Sbjct: 292 --SLGVKRPNEL--ARNQLMLGVSVPLPLFDRNQGNLLEALKREDKARDE----LQALNL 343 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSM-SLSMINYRQGRYSLLDILDIER 419 EV A + + + LQ V KS + + + G+++ L++LD +R Sbjct: 344 RLSTEVLQARERLTLVRGEIDVLQREVLPGAKSAYDAATVGFGYGKFNFLEVLDAQR 400 >gi|302038495|ref|YP_003798817.1| putative outer membrane efflux protein [Candidatus Nitrospira defluvii] gi|300606559|emb|CBK42892.1| putative Outer membrane efflux protein [Candidatus Nitrospira defluvii] Length = 516 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 19/285 (6%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L VI+ + ++ + E + +A L ++ + + K G S + +++ EA + Sbjct: 203 LTVIASVEQTFWEMVFANENLKVAQAALKAAEELLASNRAKAKAGVMSIVDVLQAEAAVA 262 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI-PINIGIPADL- 271 S I EKS R + LL PA E L + P + I++ D+ Sbjct: 263 SRVEQILVAEKSIRDQEDQLRRLLN-PAEEELRQDLRLIPTDPPVTSLEAISLQEAIDIA 321 Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLY 331 + RP++ K + S + AK+ L P+LS+ G++ L+ + G T + G Y Sbjct: 322 MERRPEVLQAGKNVESSDLNVKFAKNQLLPTLSVQGTMGLSGLGADYGDATRRNLGGDFY 381 Query: 332 ---------LPIFDKGKIKS-NIRRAES-SAQEQYITWQETVLNAIKEVENALTSINEDK 380 PI ++ + N R+ ES +AQ + ++ V+ ++E A+ ++ D Sbjct: 382 NYGAGLVLSYPIGNRSAYSTYNKRQLESRNAQSSLQSVRQQVIVGVRE---AVRRVHTDF 438 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER--ATAK 423 K + + A + +K + + G + +LD +R ATA+ Sbjct: 439 KRIETTRSARIMAEKQLQAEQERLKVGLSTTRFVLDFQRDLATAQ 483 >gi|21244188|ref|NP_643770.1| TolC protein [Xanthomonas axonopodis pv. citri str. 306] gi|294627175|ref|ZP_06705763.1| TolC protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666573|ref|ZP_06731813.1| TolC protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21109824|gb|AAM38306.1| TolC protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598608|gb|EFF42757.1| TolC protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603648|gb|EFF47059.1| TolC protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 460 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 80/403 (19%), Positives = 160/403 (39%), Gaps = 83/403 (20%) Query: 73 LTILQATERINAAKENILSVRADLFP----SSYASISHRFIPNLKTNSTGQLDSDWKIDL 128 L + ++T +N +E + RA L P S+ + SHR + + ST + Sbjct: 38 LAVAESTRLVN--REGQVQARAALLPQLDGSAGYTQSHRELEGVDGRSTTK--------- 86 Query: 129 FGQRRH-IESSL-----ANLDSAYAQVDIAKL----------NVISKLIPSYIDARHFKE 172 QR++ I+ S A + AQ ++AK ++I++ +Y E Sbjct: 87 --QRQYAIQGSQTIFNWAQFSNLRAQREVAKAADFTLASANNDLITRTSAAYFQVLVGIE 144 Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232 ++ A KK + + + G + + A+ +D T + + Sbjct: 145 SLAAAETNEAAAKKQFDYADKRLEVGLAPITDVHEARAQYDQARADTITARNTLKDYYQA 204 Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNL---YIPINIGIPADLIRNRPDIRYQEKKLADSV 289 ++ L G P ++ + F+P + Y ++ + A I + P ++ Q+ +++ + Sbjct: 205 LTELTGQPVVG----LRALPDEFRPEVPAAYSNVDQ-LVATAIADNPALKAQQLQVSAAE 259 Query: 290 AKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT----------------HWSFGPKLYLP 333 A++ A++ P+LSL ++ NS+ G T S G L +P Sbjct: 260 AQVSAARAGHLPTLSLGANVG--RSNSWGGQGTVDEAAGNFTTAGRNIDTDSVGITLTIP 317 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQ--------------ETVLNAIKEVENALTSINED 379 IF G +S +R+A S Q T++ +TV+ I EVE ++ Sbjct: 318 IFAGGATQSAVRQALSQRDIQQDTYEQQKRALDRNTRNAYQTVVAGISEVEARRLAVVSA 377 Query: 380 KKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYSLL 412 + Q +E+ +++++ + +NY Q RY+ L Sbjct: 378 QAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYNFL 420 >gi|157148600|ref|YP_001455919.1| outer membrane channel protein [Citrobacter koseri ATCC BAA-895] gi|157085805|gb|ABV15483.1| hypothetical protein CKO_04427 [Citrobacter koseri ATCC BAA-895] Length = 489 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 28/174 (16%) Query: 282 EKKLADSVAKIGI--AKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------------FG 327 + +L+ +A+ I A+ P+L L S ++ D S+ G TH S G Sbjct: 249 QARLSQDLAREQIRQAQDGHLPTLDLTASTGVS-DTSYSGSKTHNSTQYDDSNMGQNKIG 307 Query: 328 PKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 LP++ G + S +++A+ A EQ + +V ++ V ++ +IN + Sbjct: 308 LSFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSV---VQTVRSSFNNINASISSIN 364 Query: 385 KLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKS 438 + AV + S+ + Y G +++D+LD A L AK+QLA + Sbjct: 365 AYKQAVVSAQSSLDANEAGYSVGTRTIVDVLDATTA-------LYEAKQQLANA 411 >gi|238927949|ref|ZP_04659709.1| outer membrane efflux protein [Selenomonas flueggei ATCC 43531] gi|238884184|gb|EEQ47822.1| outer membrane efflux protein [Selenomonas flueggei ATCC 43531] Length = 470 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 22/242 (9%) Query: 191 SHLK-----FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFL 245 +HLK + GA +K+ +++ E+ + ++ E ++ +++ + LL E L Sbjct: 170 AHLKNVNALYEAGAQAKIDVIRSSVELSNARQELIRAESNYEVSLATLRNLLNIDRAEPL 229 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLI----RNRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + + Y P +P D I R R D+ Q + L + IA++ P Sbjct: 230 QLTTEVA-------YEPFGTALP-DCISYARRMRLDLAAQRETLQQRELAVDIARAGKKP 281 Query: 302 SLSLNGSIALTHDNSF-PGYNTHWSFGPKLYLP--IFDKGKIKSNIRRAESSAQEQYITW 358 +++L LT + F P T + + IFD G + I AE+ + Sbjct: 282 TVNLTLGTGLT--SQFRPRSKTSSDVSAAVGVNWNIFDSGVTRGAIEAAEAERDIALLNV 339 Query: 359 QETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++T ++ A ++ E ++ T AV ++ ++ YR G LLDILD + Sbjct: 340 KKTEETIDLDLRKAYLNMREAEQRFTSTGDAVRQAEEDYRIASERYRAGEGILLDILDAQ 399 Query: 419 RA 420 A Sbjct: 400 TA 401 >gi|167815524|ref|ZP_02447204.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia pseudomallei 91] Length = 177 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 20/183 (10%) Query: 17 GCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIALQQNLTIL 76 G T PE T L +F +G WW+ + +L+ LV L+ + T+ Sbjct: 2 GATPLPERTAAAQGLA-QRFDVGAQP------VPDWWKRYRSPALDALVDEGLRNSPTLA 54 Query: 77 QATERINAAKENILS-VRADLFPSSYA---SISHR------FIPN--LKTNSTGQLDSDW 124 A + ++AA+E + + + + L P+ A + R F P L GQL + + Sbjct: 55 AAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRERALGMPAFGPQTVLYNVFAGQLQASY 114 Query: 125 KIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDL 183 +DLFG R +L+ +D Q++ A+ + + ++ + + + E+++ +++ L Sbjct: 115 TLDLFGAARFANRALSKRVDVNAYQLESARRALAANIVTAAVTSAALAEQVATTERLVAL 174 Query: 184 YKK 186 ++ Sbjct: 175 ARE 177 >gi|126176005|ref|YP_001052154.1| outer membrane efflux protein [Shewanella baltica OS155] gi|125999210|gb|ABN63285.1| outer membrane efflux protein [Shewanella baltica OS155] Length = 493 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/177 (20%), Positives = 78/177 (44%), Gaps = 1/177 (0%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGPKL 330 + P ++ E K A + + + + YP++ L G+ L D+S F W G + Sbjct: 291 LSQHPALKLLEAKEAQANGLVSLEQGKYYPTVFLFGNYTLYEDDSLFSQVEPDWMVGVGV 350 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAV 390 +PI + + A+S+ + T +T + ++ + + + ++ V L ++ Sbjct: 351 KVPILSRDGRSGKVEAAKSALLQARYTKAQTRQDLSLLLDQSYRQLLQAEEEVKALDTSL 410 Query: 391 ELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 EL +++ L I + QG + +D +D E + V+ A+ + ++Y L G Sbjct: 411 ELATENLRLREIAFNQGLSTSIDRVDAELKLSAVKTQQLAARYRYVQAYARLMAISG 467 >gi|332295875|ref|YP_004437798.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] gi|332178978|gb|AEE14667.1| outer membrane efflux protein [Thermodesulfobium narugense DSM 14796] Length = 444 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 63/328 (19%), Positives = 146/328 (44%), Gaps = 45/328 (13%) Query: 138 SLANLDSAYAQVDIAKLN-------VISKLIPSYIDARHFKERISIAHQILDLYKKNIEL 190 +L +D A ++ KLN ++ K+I SY++ + KE + +A + LD ++ ++ Sbjct: 125 ALLAIDMAKKELQAQKLNYQRKKEEIVYKVIKSYLEVQTAKEYLDVAQKALDDALEHEKI 184 Query: 191 SHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG-----YPATEFL 245 + + + G + +++ E + + + + + +K+F ++ ++ +LG P+ F Sbjct: 185 AKINYKVGLSVYSDVLRAETSVLAAKEKLVSAKKNFEISQRSLGLVLGIGENVVPSGNFD 244 Query: 246 HYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK--IGIAKSDLYPSL 303 ++ Q + N + +R D++ E L + +AK I +A S P + Sbjct: 245 LPLKLQEEEYYKNASL------------SRADLKAIE--LRNKIAKKNIELATSSYLPYI 290 Query: 304 SLNGSIALT-HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETV 362 L+ + + H + F + + F L IFD K ++ I++A++ Q+ V Sbjct: 291 GLSLTYQMNDHSSIFGSEGSSYQFLTYLSWNIFDGAKRENEIKKAKAE--------QKMV 342 Query: 363 LNAIKEVENALT--------SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +K +E+A++ + E K+ + + A+ ++ + + Y+ +D+ Sbjct: 343 EENLKSLEDAISLEVYSSYLGVKEAKENLELAKGALVSAEEDTKIILHRYQNALSPFIDL 402 Query: 415 LDIERATAKVEVDLSIAKRQLAKSYVDL 442 LD + + +L + + S VDL Sbjct: 403 LDAQTNLDNIRANLVDKENKYFMSLVDL 430 >gi|326423740|ref|NP_759599.2| type I secretion outer membrane protein, TolC [Vibrio vulnificus CMCP6] gi|319999103|gb|AAO09126.2| Type I secretion outer membrane protein, TolC precursor [Vibrio vulnificus CMCP6] Length = 441 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 11/164 (6%) Query: 292 IGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I +A S PSL+L+G +++ G +++ G L +P++ G S ++AE Sbjct: 265 ISLASSGHLPSLTLDGGYNYADVSNSAQSDGTTNNFNVGVNLVVPLYTGGNTTSQTKQAE 324 Query: 349 ----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 S++Q+ T++ +KEV +IN + + +V + ++ + + Sbjct: 325 FNYVSASQDLEATYR----GVVKEVRAQNNNINASIGALRAYEQSVVSARSALEATEAGF 380 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G +++D+LD R +LS A+ S + L A+G+ Sbjct: 381 DVGTRTIVDVLDATRRLYDANKNLSNARYNYILSVLQLRQAVGT 424 >gi|37678767|ref|NP_933376.1| outer membrane channel protein [Vibrio vulnificus YJ016] gi|320157454|ref|YP_004189833.1| type I secretion outer membrane protein, TolC [Vibrio vulnificus MO6-24/O] gi|37197508|dbj|BAC93347.1| outer membrane protein [Vibrio vulnificus YJ016] gi|83701800|gb|ABC41339.1| outer membrane protein TolC [Vibrio vulnificus] gi|83701802|gb|ABC41340.1| outer membrane protein TolC [Vibrio vulnificus] gi|319932766|gb|ADV87630.1| type I secretion outer membrane protein, TolC precursor [Vibrio vulnificus MO6-24/O] Length = 441 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 11/164 (6%) Query: 292 IGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I +A S PSL+L+G +++ G +++ G L +P++ G S ++AE Sbjct: 265 ISLASSGHLPSLTLDGGYNYADVSNSAQSDGTTNNFNVGVNLVVPLYTGGNTTSQTKQAE 324 Query: 349 ----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 S++Q+ T++ +KEV +IN + + +V + ++ + + Sbjct: 325 FNYVSASQDLEATYR----GVVKEVRAQNNNINASIGALRAYEQSVVSARSALEATEAGF 380 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G +++D+LD R +LS A+ S + L A+G+ Sbjct: 381 DVGTRTIVDVLDATRRLYDANKNLSNARYNYILSVLQLRQAVGT 424 >gi|206602528|gb|EDZ39009.1| Putative outer membrane efflux protein [Leptospirillum sp. Group II '5-way CG'] Length = 464 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 14/171 (8%) Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG------YNTHWSF 326 R RPD++ E + + A++ AKS +PS++ G ++ S PG Y ++ F Sbjct: 273 RQRPDLQQIEATVREGEARLANAKSQNWPSINGIGQYFMS---SIPGQALGITYMPNYPF 329 Query: 327 -----GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKK 381 G + +PIF+ G I + A S E L EV A ++ + Sbjct: 330 STFNIGGVVNVPIFEGGLISHQVHEARSRLASTNDQLSEAKLRVAAEVREAALNVRAALQ 389 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 ++ + A E +++ L +++ G +D++D E + + DL A+ Sbjct: 390 RWSEARTAFESARENDRLVEKSFKVGTARSVDVVDAETSLRQAREDLIQAR 440 >gi|81300570|ref|YP_400778.1| hypothetical protein Synpcc7942_1761 [Synechococcus elongatus PCC 7942] gi|81169451|gb|ABB57791.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 576 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 26/192 (13%) Query: 259 LYIPINIGIPADLI---RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL------NGSI 309 L P N+ + ++ +NRP++ + + S + A+ + P L L NG+I Sbjct: 358 LAAPWNLSLDESIVLAFQNRPELEREVLQRNISYNQAQAARGQVLPQLGLQASYGVNGAI 417 Query: 310 -----ALTHDNSFPG---YNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 + + +FP NT ++S G L +P+FD G +N ++ E + Q I Sbjct: 418 NSNLRSGSQALTFPSPTLTNTSSYNYSIGLVLNVPLFDGGLANANAQQQELNGQ---IAE 474 Query: 359 QETVL--NAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 Q VL N I+ +VE A + + + + AVE ++++ L+ + ++ G + +++ Sbjct: 475 QNFVLTRNQIRTDVETAFYDLQTNLANIGTTRKAVEQAREALRLARLRFQAGVGTQTEVI 534 Query: 416 DIERATAKVEVD 427 D +R + E + Sbjct: 535 DSQRDLTRAEAN 546 >gi|160888001|ref|ZP_02069004.1| hypothetical protein BACUNI_00405 [Bacteroides uniformis ATCC 8492] gi|270295626|ref|ZP_06201827.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478609|ref|ZP_07937766.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] gi|156862500|gb|EDO55931.1| hypothetical protein BACUNI_00405 [Bacteroides uniformis ATCC 8492] gi|270274873|gb|EFA20734.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905250|gb|EFV27047.1| outer membrane efflux protein [Bacteroides sp. 4_1_36] Length = 442 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN-IELSHLKFTQGA 199 NL +A A +D AK ++ + +Y+ +E +A + L K+ + +S L G Sbjct: 127 NLKAAIADLDKAKEDIAINIASAYLQVLFNEELHQVALGQVQLSKEQYVRISRLA-DLGK 185 Query: 200 TSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL 259 S L + +A + E ++ ++++ + ++S L+ E + N L Sbjct: 186 ASPAELAEAKARVAQDEMNVVQTNNNYKLALLDLSQLIELETPEGFNLESPAVNLDLVPL 245 Query: 260 YIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DN 315 P I A + ++ I+ + +L S I IA+S+ YP LSLNGS+ + D Sbjct: 246 TPPDEIFQTA--MVSKASIQAAQFRLEGSKHNIRIAQSNYYPQLSLNGSLGTNYYSTIDR 303 Query: 316 SFP-----GYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 +F +N + F L +PIF++ ++ +R A Sbjct: 304 TFSQQMNDNFNKYVGFN--LSVPIFNRLSTRNRVRTA 338 >gi|330944359|gb|EGH46398.1| outer membrane efflux protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 391 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR----RAESSAQEQYITWQETVLNAIKEVE 370 + G S G +L +P++ G + S +R R S EQ +E VLN Sbjct: 230 GGYRGNVAQSSIGVELSIPLYSGGMVNSQVRESTERLYQSQDEQEDRRREVVLN----TR 285 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 NA IN D + + + ++ +KS+ + + G +++D+L+ ER Sbjct: 286 NAFRGINSDIEQIAARRQSIRSGRKSVEANKVGVDIGSRNVVDVLNAER 334 >gi|325273029|ref|ZP_08139340.1| outer membrane efflux protein [Pseudomonas sp. TJI-51] gi|324101834|gb|EGB99369.1| outer membrane efflux protein [Pseudomonas sp. TJI-51] Length = 417 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 55/301 (18%), Positives = 120/301 (39%), Gaps = 28/301 (9%) Query: 129 FGQRRHIESSLANLDSAYAQVDIAKL--NVISKLIPSYIDARHFKERISIAHQILDLYKK 186 G +R + A + A AQ+D+ + + + ++ ++ A + + +A Q L + Sbjct: 91 LGGKRAARIAAAGVGQAIAQLDLERQRNGLRADVVQAFHAALRAQTALELAQQSQALTAR 150 Query: 187 NIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + + + T G +S + + + ++ E+ + + + ++ L G P F Sbjct: 151 GLRVVQGRVTAGQSSPVEATRAQVQLAQAEAQLRRAQTQRSVAYQALARLTGSPLASFDS 210 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN 306 Q+ N P + +I + + + R ++ A +G K+ P+L+ Sbjct: 211 L---QAANLSPGVAPSTDILLA--RVEQTVEWRLAAAQVERGDAALGTEKAQRIPNLT-- 263 Query: 307 GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 ++L S G + LP+FD+ + N+ A A + L Sbjct: 264 --VSLGSQYSREERERVNVVGLSMPLPLFDRNQ--GNVLAAARRADQARDLRNAVALRLR 319 Query: 367 KEVENAL----TSINE----DKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 E +A+ T++ E D+ I+ Q AV+ + + G+++ LD+LD + Sbjct: 320 SETRSAVDQWATAMQEVAAYDRTILPAAQQAVDTATR-------GFEMGKFAFLDVLDAQ 372 Query: 419 R 419 R Sbjct: 373 R 373 >gi|237800609|ref|ZP_04589070.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|320324241|gb|EFW80320.1| outer membrane efflux protein [Pseudomonas syringae pv. glycinea str. B076] gi|331023469|gb|EGI03526.1| outer membrane efflux protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 468 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 315 NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIR----RAESSAQEQYITWQETVLNAIKEVE 370 + G S G +L +P++ G + S +R R S EQ +E VLN Sbjct: 307 GGYRGNVAQSSIGVELSIPLYSGGMVNSQVRESTERLYQSQDEQEDRRREVVLN----TR 362 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 NA IN D + + + ++ +KS+ + + G +++D+L+ ER Sbjct: 363 NAFRGINSDIEQIAARRQSIRSGRKSVEANKVGVDIGSRNVVDVLNAER 411 >gi|56752340|ref|YP_173041.1| hypothetical protein syc2331_c [Synechococcus elongatus PCC 6301] gi|56687299|dbj|BAD80521.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 576 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 26/192 (13%) Query: 259 LYIPINIGIPADLI---RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL------NGSI 309 L P N+ + ++ +NRP++ + + S + A+ + P L L NG+I Sbjct: 358 LAAPWNLSLDESIVLAFQNRPELEREVLQRNISYNQAQAARGQVLPQLGLQASYGVNGAI 417 Query: 310 -----ALTHDNSFPG---YNT---HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITW 358 + + +FP NT ++S G L +P+FD G +N ++ E + Q I Sbjct: 418 NSNLRSGSQALTFPSPTLTNTSSYNYSIGLVLNVPLFDGGLANANAQQQELNGQ---IAE 474 Query: 359 QETVL--NAIK-EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415 Q VL N I+ +VE A + + + + AVE ++++ L+ + ++ G + +++ Sbjct: 475 QNFVLTRNQIRTDVETAFYDLQTNLANIGTTRKAVEQAREALRLARLRFQAGVGTQTEVI 534 Query: 416 DIERATAKVEVD 427 D +R + E + Sbjct: 535 DSQRDLTRAEAN 546 >gi|319955022|ref|YP_004166289.1| heavy metal efflux pump, czca family [Cellulophaga algicola DSM 14237] gi|319423682|gb|ADV50791.1| heavy metal efflux pump, CzcA family [Cellulophaga algicola DSM 14237] Length = 1466 Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust. Identities = 64/328 (19%), Positives = 148/328 (45%), Gaps = 42/328 (12%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 S+ + +L+ V IA ++N +LQ TER+ ++ +L A F S+ S I + Sbjct: 1090 SYPEITLDSAVVIA-RRNYPLLQ-TERLEIERQQVLKSSAYDFGSTQIFTSGEEISEEQG 1147 Query: 115 NSTGQLDSDWKIDLFG---QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFK 171 T ID+ G ++R +A +++Y + ++ V + ++ D K Sbjct: 1148 IYTLIGIGQQNIDILGIAAKKRLQNKRVALAEASYT---LTEIQVAQHVKNAWSDVFQQK 1204 Query: 172 ERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVH 231 +++++ H++ +Y++ + L F A S+L + + I + ++ + +++ Sbjct: 1205 KKVNLYHELDAIYRQFSKAVALNFEVEAISRLEYAAAKNQALQIANKYQQAQQDYLISLQ 1264 Query: 232 NISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAK 291 ++ L + + F +NF PN + +++ AD + P+I + ++ ++ A Sbjct: 1265 KLN--LWFVSDTFYTV----PDNFNPNNFFDLDV-TQAD--NSHPEIVKSQLRVEEAHAN 1315 Query: 292 IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF---DKGKIKSN----- 343 +AK++L P ++ G L N+ G+ +S+ + +P F D+ +IK++ Sbjct: 1316 YKVAKANLLPKFTIQG--GLQKVNNVSGF---YSYQAGISVPFFSGSDRSRIKASKIEEQ 1370 Query: 344 ------------IRRAESSAQEQYITWQ 359 ++ A + A + Y+ W+ Sbjct: 1371 IAQTEATFKNKQVKAAYAQAIQSYVKWK 1398 >gi|255589357|ref|XP_002534931.1| conserved hypothetical protein [Ricinus communis] gi|223524336|gb|EEF27448.1| conserved hypothetical protein [Ricinus communis] Length = 120 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 56/110 (50%) Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +S I +A + + ++ TVLNA+KE E +L++ + + A + + + L+ Sbjct: 5 RSRIAQARAQSAASLASFDGTVLNALKESEQSLSAYGAAMQQRDAMAEARDRAENAFRLA 64 Query: 401 MINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 YR G S LD++ + + + ++ A +++ + V ++ A+G G+ Sbjct: 65 DQRYRAGSISYLDVIVAQTSLIDAKAQVAAADQRVGSARVSVFKALGGGW 114 >gi|283786241|ref|YP_003366106.1| outer membrane efflux protein of T1SS [Citrobacter rodentium ICC168] gi|282949695|emb|CBG89314.1| putative outer membrane efflux protein of T1SS [Citrobacter rodentium ICC168] Length = 468 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 54/297 (18%), Positives = 127/297 (42%), Gaps = 25/297 (8%) Query: 134 HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHL 193 + + A + A V ++ NV + + + + +++ + +A + LD L++ Sbjct: 138 QVRAENAGVAQEQANVLVSIDNVGLETASTMVQVQTWQQMVEVAKEQLDALSAIGRLTNQ 197 Query: 194 KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSN 253 + +GA+S +V+ +A I+ + + + + + T LG+ + SN Sbjct: 198 RNDEGASSLSDVVQTDARIEGARAQLIQYQANLESAQETLKTWLGWKNLNGI------SN 251 Query: 254 NFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 +F L + P D + P + + + A + A + + P++SL + Sbjct: 252 DFPAKLSRSCELATPDDKLV--PSVLAAWAQANVAQANLDYANAQMTPTVSLEPEVRHYL 309 Query: 314 DNSFPGY----NTHWSFGPKLYLPIFDKGKIKSN-------IRRAESSAQEQYITWQETV 362 ++++ G T +S ++ +PI+ G + + + A+S+ Q + ++ + Sbjct: 310 NDNYSGSASIDRTQYSAWVRVEMPIYQGGGLTARRNATSHAVESAQSAIQRTRLDVRQKL 369 Query: 363 LNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 L+ E N TS+ ++ T + EL+++ L + G LLD+L+ E+ Sbjct: 370 LSDRSEAMNLATSLQIQQRQQTLSERTRELYQQQY-LDL-----GSRPLLDVLNAEQ 420 >gi|319955502|ref|YP_004166769.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] gi|319424162|gb|ADV51271.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] Length = 441 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 13/101 (12%) Query: 260 YIPINI----GIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI------ 309 Y+P N+ I A+ + P+I + + S + IAK P+LSL GS+ Sbjct: 238 YLPENVPELQEIYAEAVAILPEINASKTNVLVSEKALDIAKGGYLPTLSLTGSLGSGYTS 297 Query: 310 --ALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 AL + F G N + G L +PIF+K K K+ ++ A+ Sbjct: 298 TQALNFTDQFDG-NFNQRVGLSLNVPIFNKNKTKAAVQEAQ 337 >gi|229588245|ref|YP_002870364.1| putative metal transporter-like exported protein [Pseudomonas fluorescens SBW25] gi|229360111|emb|CAY46965.1| putative metal transport-related exported protein [Pseudomonas fluorescens SBW25] Length = 407 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/270 (18%), Positives = 119/270 (44%), Gaps = 26/270 (9%) Query: 158 SKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIES 217 +++I +Y A +ER+ +A + + + ++ + +++ + T G TS + + + ++ + Sbjct: 123 AEVIDNYYGALRAQERLDLAQRSMAVAERGLAVANGRVTAGKTSPVEATRAQVQLSEMRL 182 Query: 218 DIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ + ++ G +F Q + + Q +P + A L + + Sbjct: 183 ELNRAQIGLTDAYRRLAASTGNAVPDF----QVVATHTQSTPALPPATQLLAHLEQT-AE 237 Query: 278 IRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDK 337 +R E + + A +G+ K+ P L + SI +D S G + +P+F++ Sbjct: 238 LRLAELNILQNEASVGLEKAQRIPDLDV--SIGSQYDASVRERVNL--VGVSMPIPLFNR 293 Query: 338 --GKIKSNIRRAE------SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 G + + RRA+ ++A+ + T L+ + + + N+ +I+ Q A Sbjct: 294 NQGNVLAATRRADQARDLRNAAELRLRTETRHALDLWQTANTEVRAFNQ--QILPAAQEA 351 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIER 419 V+ + + G++S LD+LD +R Sbjct: 352 VDSATRGFEM-------GKFSFLDVLDAQR 374 >gi|224540449|ref|ZP_03680988.1| hypothetical protein BACCELL_05362 [Bacteroides cellulosilyticus DSM 14838] gi|224517963|gb|EEF87068.1| hypothetical protein BACCELL_05362 [Bacteroides cellulosilyticus DSM 14838] Length = 429 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 49/264 (18%) Query: 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN 264 L+ E ++ E + +K+F + ++L+G P E P PI+ Sbjct: 189 LLMAEVKLNDAEFQLLQAQKNFDTGLMAFNSLIGLPLEE-------------PT---PID 232 Query: 265 IGIP----ADLIR-----NRPDIR--YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH 313 IP +D R RP+I+ + + K+A+S K+ +K + ++GS Sbjct: 233 TIIPQVDTSDSSRLTLAIPRPEIKIAHDQIKMAESSLKLNDSKYKPQLYVGVDGSY---- 288 Query: 314 DNSFPGYNTHWSFGP------KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 S PGY+ P K+ +P+F+ GK RR E A Q I + LN I+ Sbjct: 289 --SSPGYDLRADLDPNYAVYAKVSVPLFEWGK-----RRNEKRASNQKIGIAKDNLNQIQ 341 Query: 368 -----EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATA 422 E++ A S+++ V Q ++E ++ +M Y +G S++++++ + Sbjct: 342 DKVNLEIQTARLSLSQALDQVQLSQQSLEKAHENERQAMERYNEGEISIVEVIEAQTYRQ 401 Query: 423 KVEVDLSIAKRQLAKSYVDLYIAI 446 E++ AK Y L A+ Sbjct: 402 NAEINHVQAKASAQGQYSALIKAL 425 >gi|163758528|ref|ZP_02165616.1| Outer membrane protein [Hoeflea phototrophica DFL-43] gi|162284817|gb|EDQ35100.1| Outer membrane protein [Hoeflea phototrophica DFL-43] Length = 306 Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 31/304 (10%) Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLF-- 129 N +L A ER+ A+ RADLFP+ + S N T +T + S+ +DL Sbjct: 11 NPNVLVAHERVEQARARETIARADLFPAVDLTASRTDYINDATVTTSET-SEQNVDLSAS 69 Query: 130 -----------GQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 G R S+LA ++ VD +I +L + + + +I + Sbjct: 70 LSLSKAFAGISGTRAARFSTLAKKEALRGSVD----QIILELALAQVAIERATKHAAIRN 125 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++ K + +FT G + L + A IK +ES+I L N + +L G Sbjct: 126 ELKAELKTFLSRQKKRFTAGELAASELESIRARIKLVESEIVRLGSEITSNEAKLRSLAG 185 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPIN--IGIPADLIRNRPDIRYQEKKLADSVAKIGIAK 296 + + +IP N + L RN P +R E + + + A Sbjct: 186 EQDISEVKLVDLAR-------FIPGNEDEAVAIALHRN-PALREAEWEQQSASQNVAKAT 237 Query: 297 SDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP---KLYLPIFDKGKIKSNIRRAESSAQE 353 L+P +SL+ + L+ D +T + L +P+FD G+ + + +S +E Sbjct: 238 KTLFPDVSLSFNAPLSSDRYASTSSTRSNESNVRLDLRIPLFDGGRRLAEVTLEKSKLRE 297 Query: 354 QYIT 357 Q T Sbjct: 298 QTYT 301 >gi|224026823|ref|ZP_03645189.1| hypothetical protein BACCOPRO_03580 [Bacteroides coprophilus DSM 18228] gi|224020059|gb|EEF78057.1| hypothetical protein BACCOPRO_03580 [Bacteroides coprophilus DSM 18228] Length = 443 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 71/341 (20%), Positives = 147/341 (43%), Gaps = 33/341 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 SL + + A++ NLTI Q + ++ + + + P S SH F Sbjct: 28 SLKQCINYAIEHNLTIKQQEASRDQSEVELNTAKWSRLPDLNGSASHSFNFGRSLQADNT 87 Query: 109 IPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLA--NLDSAYAQVDIAKLNVISKLIPSYI 165 ++ T +TG L+ + LF G + SLA NL +A ++ AK ++ ++ +Y+ Sbjct: 88 YQSINTQNTG-LNLTTSVPLFTGMQIPHSISLAKLNLKAAIEDLNKAKEDISIQVASAYL 146 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 +E +AHQ + L ++ ++ + G S+ + ++ + + + + Sbjct: 147 QVLFNEELAKVAHQQVSLSQEMLKQKEAYYQNGKASEAEWREAQSRVAQDQLSAVQADNN 206 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNN--FQPNLYIPINIGIPADLIRNRPDIRYQEK 283 +++ + ++S LL P+ + + + + +L P I A L ++P I + Sbjct: 207 YQLALLDLSQLLELPSPDDFRIVSPEVDEQALTASLTSPTEIYSQAVL--SKPSILAAQY 264 Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS----------FGPKLYLP 333 +L + I IA+S YP L+ ++ + N N ++ G L +P Sbjct: 265 RLEGARHNIRIAQSRYYPQLNFGAGLSTNYYNVSGRENGNFGAQLRDNFSQYIGLSLSIP 324 Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQ--ETVLNAIKEVENA 372 IF++ ++ +R A Q+ + WQ E+ KE++ A Sbjct: 325 IFNRFSTRNQVRSAR--IQQSNLNWQLEESKKTLYKEIQQA 363 >gi|329849590|ref|ZP_08264436.1| outer membrane efflux family protein [Asticcacaulis biprosthecum C19] gi|328841501|gb|EGF91071.1| outer membrane efflux family protein [Asticcacaulis biprosthecum C19] Length = 446 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 84/420 (20%), Positives = 173/420 (41%), Gaps = 43/420 (10%) Query: 54 ESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----SYASISHRFI 109 ES S LV ++ I A +++AA+ + V + FP A + + Sbjct: 25 ESTACMSAEALVATITSRDPRIRDAWIQVDAAQARLKQVSSSRFPQIGFFGRAGVGDGVL 84 Query: 110 PNLKTNSTGQLDSDWKIDLFGQRRHI-ESSLANLDSAYAQVDIAKLNVISKLIPSYIDAR 168 + + ++ L K FG R+ +S+ A +D++ +L V + + + +D Sbjct: 85 ADNEVDNRSGLRFTQKFLDFGAGRNARKSAQAGVDASRHAAQSLQLRVAGEGLQTALDLE 144 Query: 169 HFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI--PTLEKSF 226 ERI+ + Y+ +L ++ +G ++ + E I +++ T+E+ Sbjct: 145 RRNERIAALEAFVAYYQAQEDLIDMRLEKGVLTEPEAAAMRVEGARIRAELRRETMERDN 204 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL--YIPINIGIPADLIRNRPDIRYQEKK 284 R L + A + + + +F P + +P ++ + P + Sbjct: 205 RTR-----QLERFTAIDDVCVA---TESFGPFIAQRVPQSLTELEAVASADPGLLELAAN 256 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPG-YNTHWSFGPKLYLPIFDKGKIKS 342 + S A++ + +P+L N LT D +SF G + H G L LPI G+ K+ Sbjct: 257 ITSSEAELQQVHRERWPTLDFNA--VLTQDYDSFRGEWRPHHRVGLDLDLPILSGGRRKA 314 Query: 343 NIRRAESSAQEQYITWQETVLNAIKEVEN------ALTSINEDKKIVTKLQHAVELHKKS 396 ++ AE+ + Q + V ++V + L S NE Q+ + ++ Sbjct: 315 DVSAAEARVRSQKARFDTYVEERRQKVRSDWGELVQLRSANE--------QYLIARDNQA 366 Query: 397 MSLSMINYR--QGRYSLLDILDIERATAK---VEVDLSIAKRQLAKSYVDLYIAIGSGYN 451 + + + + QG ++ D+++ +RA E+D ++ +L +DL I I + YN Sbjct: 367 LVVDAVFFEVSQGSKTMDDLIEAQRAQMNAILAEID---SRYELEMKNLDLVIDIHNIYN 423 >gi|293603155|ref|ZP_06685588.1| type I secretion outer membrane efflux protein [Achromobacter piechaudii ATCC 43553] gi|292818386|gb|EFF77434.1| type I secretion outer membrane efflux protein [Achromobacter piechaudii ATCC 43553] Length = 443 Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 4/146 (2%) Query: 291 KIGIAKSDLYPSLSLNGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +I IAKS YP+L+L S D N+ PG + G L +P++ G + S + Sbjct: 265 EIQIAKSGHYPTLNLRASSGSASDAVMRNAAPGKPIDSTVGIVLSIPLYSGGGVSSQVTE 324 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 Q+ ++ AI+ T + + L+ + + ++ + Y Sbjct: 325 KVQLEQKARYDFETARRQAIQAARQYYTGVTSGLARIQALEAGEKSSRAAVEANRTGYEV 384 Query: 407 GRYSLLDILDIERATAKVEVDLSIAK 432 G LD+L+ ++ + DL++A+ Sbjct: 385 GVRINLDVLNAQQQLYATQRDLALAR 410 >gi|262384235|ref|ZP_06077370.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] gi|301308850|ref|ZP_07214802.1| putative outer membrane efflux protein [Bacteroides sp. 20_3] gi|262293938|gb|EEY81871.1| outer membrane efflux protein [Bacteroides sp. 2_1_33B] gi|300833374|gb|EFK63992.1| putative outer membrane efflux protein [Bacteroides sp. 20_3] Length = 444 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 43/290 (14%) Query: 152 AKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAE 211 AK ++ K + +Y+D ++K I +A + L+ + + + + G K + + EA+ Sbjct: 132 AKDDLAMKTMQAYMDVVYYKGTIRMAAEKLEESNRTLYKTRRQEELGLKGKADVAQFEAQ 191 Query: 212 IKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNL-YIP--INIG-I 267 + + + + + F + + + YP+ ++ + + P++ Y+P N+ I Sbjct: 192 VAADDYTLTHQQNLFNTALLTLRECMNYPSD-----LELEVDTLLPDINYVPEVENVAEI 246 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-------------- 313 A N P E +L S + I K L PS+ LN I+ ++ Sbjct: 247 FAYASGNNPTALQAEYQLTQSKYQYRIYKGKLLPSIYLNAGISTSYFENLKSDKAPEVFK 306 Query: 314 DNSFPGYNTHWSFGPKLYLPIFD-------KGKIKSNIRRAESSAQEQYITWQETVLNAI 366 D + SF L P+FD + ++N+R A + E + Q V ++ Sbjct: 307 DQFKNNRGEYVSFS--LSFPLFDGLSRLTNARRYRNNMRIARETRTEVFRQLQTAVEQSV 364 Query: 367 KEVEN-ALTSINEDKKIVT-KLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + E A +I DKK+ + +L + V L K Y +G S LD+ Sbjct: 365 LDREGYAKEAIQMDKKVRSDELAYRVTLRK---------YEEGLMSTLDV 405 >gi|294012217|ref|YP_003545677.1| putative agglutination protein [Sphingobium japonicum UT26S] gi|292675547|dbj|BAI97065.1| putative agglutination protein [Sphingobium japonicum UT26S] Length = 464 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD-NSFPGYN--------THWSF 326 P +R E + + A + AKS+L P++SL G+ + D + F G W Sbjct: 253 PLVREAEADIQAAHAVVDEAKSELGPTVSLEGTGRIGEDVDGFRGSTNDVQGRVVVRW-- 310 Query: 327 GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 +LY ++ K++ RRA E + + A ++V A + +KK VT L Sbjct: 311 --QLYNGGINRAKVQEMTRRAS----EARFRLSQRLREAEEDVRTAWNRWDTEKKRVTDL 364 Query: 387 QHAVELHKKSMSLSM-INYRQ----GRYSLLDILD 416 + ++S + ++YR+ GR SLLD+LD Sbjct: 365 SR-----QGTVSDGLLVSYREQFNVGRRSLLDVLD 394 >gi|295097242|emb|CBK86332.1| type I secretion outer membrane protein, TolC family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 441 Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust. Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 27/269 (10%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 + + + +++ + A + LD L+ + +GATS +V+ +A I+ + + Sbjct: 140 AMVQVQTWQQMVETAKEQLDALSSIGTLTKQRNDEGATSLSDVVQTDARIEGARAQLMQY 199 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + S + + +LLG+ + + SN+F +L +I P D R P + Sbjct: 200 QASLDSSRATLMSLLGWDSLNAV------SNDFPQSLARSCDIAEPDD--RLVPSVLAAW 251 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYN----THWSFGPKLYLPIFDKG 338 + + A + A + + P++SL + ++ + G T +S K+ +P++ G Sbjct: 252 AQANVAQANLDYANAQMTPTVSLEPEVRHYLNDRYAGNETRDRTQYSAWVKVQMPLYQGG 311 Query: 339 KIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMS 398 + + A + + T Q T L EV L E + V L +++ + + Sbjct: 312 GLTARRNAAGHAVESAQSTIQRTRL----EVRQKLL---EARSQVMSLMSTLQIQGRQEA 364 Query: 399 LSMIN---YRQ-----GRYSLLDILDIER 419 LS Y+Q G LLD+L+ E+ Sbjct: 365 LSARTRELYQQQYLDLGSRPLLDVLNAEQ 393 >gi|222053832|ref|YP_002536194.1| outer membrane efflux protein [Geobacter sp. FRC-32] gi|221563121|gb|ACM19093.1| outer membrane efflux protein [Geobacter sp. FRC-32] Length = 433 Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/230 (17%), Positives = 97/230 (42%), Gaps = 17/230 (7%) Query: 195 FTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNN 254 F QG +K+ + + EA + + ++ + E + + ++ +G P+ + Sbjct: 184 FIQGIRAKVEVSRAEANLYAAKTALIRAENNRDLAKVELANSIGIPSLA----------D 233 Query: 255 FQP------NLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 QP + +P + + I R +++ + + + A + A+S P LS S Sbjct: 234 RQPVAPAIGSAPLPDESQVLQEAISRRSELKQLDSLGSVAAANLKTARSGYLPILSGTAS 293 Query: 309 IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE 368 + D SFP + W G L +P+F + + + ++ + L +K+ Sbjct: 294 VGYA-DRSFPPGDNVWGVGLNLTMPLFSGFSTREQEKESLAALRGVEARKNSVKLQVVKD 352 Query: 369 VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 V+ A + E + + V ++ +L+M Y++G +++++ D + Sbjct: 353 VKFAWLGVREATDRIVSTKKEVAAAGENQALAMGRYQEGVGTIVEVTDAQ 402 >gi|124514668|gb|EAY56180.1| putative outer membrane efflux protein [Leptospirillum rubarum] Length = 464 Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG----------SIALTHDNSFPGYNT 322 R RPD++ E + + A++ AKS +PS++ G ++ +T+ ++P ++T Sbjct: 273 RERPDLQQIEATVREGEARLANAKSQNWPSINGIGQYFMSSIPGQALGITYMPNYP-FST 331 Query: 323 HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI 382 ++ G + +PIF+ G I + A S E L EV A ++ + Sbjct: 332 -FNIGGVVNVPIFEGGLISHQVHEARSRLASTNDQLSEAKLRVAAEVREAALNVRAALQR 390 Query: 383 VTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 ++ + A E +++ L +++ G +D++D E + + DL A+ Sbjct: 391 WSEARTAFESARENDRLVEKSFKVGTARSVDVVDAETSLRQAREDLIQAR 440 >gi|303230992|ref|ZP_07317735.1| outer membrane efflux protein [Veillonella atypica ACS-049-V-Sch6] gi|302514374|gb|EFL56373.1| outer membrane efflux protein [Veillonella atypica ACS-049-V-Sch6] Length = 490 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 40/254 (15%), Positives = 110/254 (43%), Gaps = 12/254 (4%) Query: 170 FKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMN 229 ++ ++ +A+Q + Y+ +++ ++ G + ++ + + ++++ + + + Sbjct: 181 YRNKVDVANQAVKDYQGHVDNVKAQYNVGLVANSDVLAADTNLADSQTNLVKAQNAANLA 240 Query: 230 VHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSV 289 N++ ++ YPA + + N+ Q Y A + +R + + + Sbjct: 241 EANLNLVIAYPAQTSITTAE---NDLQYKPYAVTLEQAKAYAMLHRSALVQSAMAVKQAE 297 Query: 290 AKIGIAKSDLYPSLSLNGSIALTH-DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + KS P++ + D F + W G ++D G+ ++ I+ A+ Sbjct: 298 EALKAEKSGYLPTVGVEAGRGYDDLDGYFGTSSKSWHIGASATWSLWDGGQTQNKIKVAQ 357 Query: 349 SSAQEQYITWQETVLNAIKEV----ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 + ++ +E L A+ +V + A ++ ++ + Q AV+ +++ ++ + Y Sbjct: 358 DTLEKA----KEANLAAVDKVNLAVQQAYLNLRSAEQTIQSTQTAVKQGQENFRIATLRY 413 Query: 405 RQGRYSLLDILDIE 418 R G + LD+LD E Sbjct: 414 RAGVGTNLDVLDAE 427 >gi|312879093|ref|ZP_07738893.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] gi|310782384|gb|EFQ22782.1| outer membrane efflux protein [Aminomonas paucivorans DSM 12260] Length = 426 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 68/358 (18%), Positives = 140/358 (39%), Gaps = 41/358 (11%) Query: 99 SSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVIS 158 S Y +++HRF P W D + +L D A A ++ Sbjct: 89 SLYLAVTHRFDP-------------WGKDDL----QLRQTLLQHDQAAASFAAQGNRLLQ 131 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESD 218 + Y DA + +++ ++ +++ ++ KF GA KL +++ E + + Sbjct: 132 QAERLYWDASLARRNLALQETLVRQRTEDLRVTKRKFDLGAVPKLDVIRAEVALSRARGE 191 Query: 219 IPTLEKSFRMNVHNISTLLG-YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277 ++ + ++ L G PA +++ S +P P + P+ Sbjct: 192 STAARLLWKDALTGLARLAGETPAEPLPGGLERPS--------LPETPADPERAFQRNPE 243 Query: 278 IRYQEKKLADSVAKIG--IAKSDLYPSLSLNGS--IALTHDNSFPGYNTHWSFGPKLYLP 333 Q ++A A+ G +A P +S S +A D S P + ++ LP Sbjct: 244 A--QALRIALEAARAGRDLAALGKVPEVSGRVSYMVATDEDVSVPPQDDA-RLALEVSLP 300 Query: 334 IFDKGKIKSNIRRAE----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 ++D G+ ++ + + +++Q+ + Q N ++E+ A E + Sbjct: 301 LYDGGRTRAQTAQGDRLVAAASQDLEVKRQ----NLVQELSEARNRWEEACAQEETKRRE 356 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 V L + + ++ + Y QG + LD+LD + A V+ A R + + L A+G Sbjct: 357 VALAAEELRIARLRYDQGVGNQLDLLDAQTKDAGARVEHLRALRGMYVALTALRGAMG 414 >gi|307822790|ref|ZP_07653021.1| outer membrane efflux protein [Methylobacter tundripaludum SV96] gi|307736394|gb|EFO07240.1| outer membrane efflux protein [Methylobacter tundripaludum SV96] Length = 478 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 1/173 (0%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 RPD+ E + + A + A++ PS+SL G+ H S P W+ G ++ P+ Sbjct: 297 RPDLAAAEATVKAAEANVKAAEAGHLPSISLIGNYGYNH-TSLPSDTQSWTIGMQVSFPL 355 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 F IR AE + + + + + +V A +N + + V Sbjct: 356 FTGFNTTYQIRSAEEQLEVKRANYDQLEQSVSLDVWRAYQLLNTAHESFKSSEDLVASAF 415 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447 +S ++M Y+ G +++D+L+ + + A + L A+ L A+G Sbjct: 416 QSERVAMGRYKAGAGNIIDLLNAQSSHANARLQLIQAQYTWLTQKAQLAQALG 468 >gi|225850430|ref|YP_002730664.1| outer membrane efflux protein [Persephonella marina EX-H1] gi|225645604|gb|ACO03790.1| outer membrane efflux protein [Persephonella marina EX-H1] Length = 394 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 72/360 (20%), Positives = 159/360 (44%), Gaps = 32/360 (8%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 S+ +T + +L+ A++ + I + + K +I S A P +Y + + Sbjct: 17 SYGET-VEQLIDYAVKNSPQIKAYRYEVESVKGDIKSAEALPNPEAYVQFGRLYSQSESG 75 Query: 115 NSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKER 173 + ++ ++ L+G R++ +E +L + D + + ++ + +A +++E Sbjct: 76 FNLTEISIHQQLRLWGTRKNAVEEALLKKSAFEYMFDFYRNQIAGEVYKKFYEALYYREL 135 Query: 174 ISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNI 233 + I + L++ K + + G +KL+L + E ++K + ++ ++ F++ + + Sbjct: 136 LKIKEENLNIVKSFYDFVRKNYELGEETKLNLFRAEKDLKIAQLELDQVKTEFQIRLKEL 195 Query: 234 STLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-IRNRPDIRYQEKKLADSVAKI 292 S +G ++ + + +L + +I DL I P+I+Y EK L +SV K Sbjct: 196 SGTVG-----------REVRSVEGDLKVIKDI---KDLQIDQLPEIKYLEK-LKESVEKA 240 Query: 293 GIAKSDLY-PSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIF--DKGKI------KSN 343 + + L P + + + D + G + G LP+F ++G+I K++ Sbjct: 241 VLVQKGLAKPQIGVE--LIAGEDAAELG-KYEFGIGISTTLPVFYRNEGEIIKLVGTKNS 297 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I + + Y + E + + + L I D KI+ L A+ L KKS L +I Sbjct: 298 ILQKIKQRKLIYRSKIEGLKQKYAILRSQLKDI--DSKIIPSLSDALNLGKKSFKLKVIT 355 >gi|225011338|ref|ZP_03701792.1| outer membrane efflux protein [Flavobacteria bacterium MS024-3C] gi|225004521|gb|EEG42489.1| outer membrane efflux protein [Flavobacteria bacterium MS024-3C] Length = 446 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 67/324 (20%), Positives = 139/324 (42%), Gaps = 34/324 (10%) Query: 126 IDLFGQRRHI----ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQIL 181 I LF R+I + L++L S Y +++ K ++ + SY+ KE +A L Sbjct: 102 ITLFDGLRNIHRINRAKLSSLASEY-RLENLKDDIRLAVANSYLQVLSGKESTKVAQAQL 160 Query: 182 DLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPA 241 ++ K++E + G + ++++EA + + E + + + + ++ LL Sbjct: 161 EVSMKDLERTRALSASGVVPQGDVLEIEATVAAQEQQLVIAQNNVIIARIALAQLL--QI 218 Query: 242 TEFLHYMQKQSNNFQPNLYI----PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKS 297 T+++++ + + PN I P +I A RN DI+ + + + I+K Sbjct: 219 TDYVNFDIAEEDFLLPNSRILDQSPKDIFEKALTFRN--DIKLSRTNVDIANKDLQISKG 276 Query: 298 DLYPSLS----LNGSIALTHDNSFPG----------YNTHWSFGPKLYLPIFDKGKIKSN 343 YP+L+ N + + N F G N S+G + +P+F+ +K+N Sbjct: 277 ARYPTLNGFFNYNTRYSDQNINPFTGDLVAFKDQLWINDGVSYGVSVNIPVFNGFSVKNN 336 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 I+R++ + + + + L + A +N K Q +E K + Sbjct: 337 IKRSKINLMRTELQFAQDKLTLESNINQAYADVNGTLKSFEAAQKTLEARKLAFQ----- 391 Query: 404 YRQGRY--SLLDILDIERATAKVE 425 Y + R+ LLD + +A ++V+ Sbjct: 392 YIKERFDVGLLDAFNFSQAQSRVD 415 >gi|167916822|ref|ZP_02503913.1| efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family [Burkholderia pseudomallei 112] Length = 271 Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/149 (20%), Positives = 73/149 (48%), Gaps = 13/149 (8%) Query: 52 WWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILS-VRADLFPSSYA---SISHR 107 WW+ + +L+ LV L+ + T+ A + ++AA+E + + + + L P+ A + R Sbjct: 36 WWKRYRSPALDALVDEGLRNSPTLAAAEKSLSAAREQLRAQIGSSLLPTIDAGGQATRER 95 Query: 108 FI--PNLKTNS------TGQLDSDWKIDLFGQRRHIESSLA-NLDSAYAQVDIAKLNVIS 158 + P + GQL + + +DLFG R +L+ +D Q++ A+ + + Sbjct: 96 ALGMPAFGPQTVLYNVFAGQLQASYTLDLFGAARFANRALSKRVDVNAYQLESARRALAA 155 Query: 159 KLIPSYIDARHFKERISIAHQILDLYKKN 187 ++ + + + E+++ +++ L ++ Sbjct: 156 NIVTAAVTSAALAEQVATTERLVALAREQ 184 >gi|297180565|gb|ADI16777.1| outer membrane protein [uncultured gamma proteobacterium HF0010_11B23] Length = 441 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 63/315 (20%), Positives = 128/315 (40%), Gaps = 61/315 (19%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSY---IDAR-HFKERISIAHQILDLYKKNIELSHLKFT 196 NL++A AQ + +I K+ +Y + AR + + +++ + + Y +E +F Sbjct: 109 NLEAAEAQFAYQQQELIIKVTRAYFKVLSARANLEAKVATEKALRNQYDSVLE----RFN 164 Query: 197 QGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ 256 G+ S++ L + +A + ESD E + ++ +++++G Q Sbjct: 165 TGSVSRIELAEAKAALNRAESDRVQAEGNVDISFEELNSIVGR----------------Q 208 Query: 257 PNLYIPINIGIPADLIRNRPDIRYQ--------------EKKLADSVAKIGIAKSDLYPS 302 L P+N + D I R D+ + + +L + A S+ P Sbjct: 209 VKLITPLNTSL--DYIAPRTDVENEVSKGLTNNYLIIEAKNRLEAADANTKSKSSNYLPK 266 Query: 303 LSLNG------SIALTHDN---------SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRA 347 + LN S T D + P + + + +P+F G S R+A Sbjct: 267 IDLNANANRRTSKQYTFDGVDSNIDLPFTIPTETENRIYSIQFSMPLFTSGLNNSQRRQA 326 Query: 348 ---ESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 E ++EQ I + ++ I+ + AL + + + L+ AVE K ++ + + Y Sbjct: 327 LLQEVKSEEQLILVERGIVQQIRTLHTALRTSELN---IASLKSAVESSKDALEATKLGY 383 Query: 405 RQGRYSLLDILDIER 419 +L+D+L E+ Sbjct: 384 ELNSRNLIDLLQAEK 398 >gi|329849008|ref|ZP_08264036.1| outer membrane efflux family protein [Asticcacaulis biprosthecum C19] gi|328844071|gb|EGF93640.1| outer membrane efflux family protein [Asticcacaulis biprosthecum C19] Length = 450 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 77/417 (18%), Positives = 162/417 (38%), Gaps = 46/417 (11%) Query: 53 WESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF---- 108 W D +L L+ N IL+ R++ A+ L P A++S Sbjct: 45 WAHLGDPYAEELAARVLRDNPDILRMAARLDEARAVTAGAGGRLKPRVDAAVSASHGNDQ 104 Query: 109 --IPNLKTNSTGQLDSDWKIDLFGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYI 165 + + ++ G ++ W++DL G+ R + ++ A A + A V++++ + Sbjct: 105 IGVTDSESLVRGGFEARWELDLSGRLRAGVAAAQAGEARDEALYEDAAHAVLARMSEGLV 164 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQG--ATSKLSL-VKLEAEIKSIESDIPTL 222 AR + L + I L + + G ++L L + A + S+I + Sbjct: 165 TARMLASQARALEASLKAQDETITLLRSRQSAGLNEATRLELALSTRARTAARWSEIASR 224 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPIN---IGIPADLIRNRPDIR 279 + + I+ G P E + +L +P + +P D +R P +R Sbjct: 225 YSDALIGLERIT---GVPVAELEARLNSD------DLTVPQDGWVTAVPLDRLRGNPALR 275 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL--THDNSFPGYNTHWSFGPKLYLPIFDK 337 + + A A++ +PSLSL + + D N S L P+F+ Sbjct: 276 AAFAQAQAADALAVEARAVRWPSLSLTAFLGVQDGSDGLRLAGNPIGSLAAALTAPLFNA 335 Query: 338 GKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKI----VTKLQHAVELH 393 G++KS A + + ++ V +A+ + A+ + + + + H EL Sbjct: 336 GQLKSQETAAVARRDQAKAAYESAVRDALADASLAVNGFDRAQTLRDGYLAAQAHDAELE 395 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGY 450 + + R+ L+ ++++ S A+ +LA++ + + A G+G+ Sbjct: 396 R-------LAARRADSGLVSVIEV-----------SEAQDRLAQAQLQVAEATGAGH 434 >gi|77456362|ref|YP_345867.1| Type I secretion outer membrane protein, TolC [Pseudomonas fluorescens Pf0-1] gi|77380365|gb|ABA71878.1| Outer membrane component of ABC transporter required for LapA secretion [Pseudomonas fluorescens Pf0-1] Length = 450 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 56/296 (18%) Query: 164 YIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLE 223 Y+D +E + +A + L +++ + L+ +G S L + EA + +++ T + Sbjct: 142 YLDVLTRREFVRLAEENLKSHQRIYDQIQLRTQRGVGSGADLDQAEARMAQARNNLITEQ 201 Query: 224 KSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNLYIPINIGIPADL-------IRNR 275 T L T FL + + + + P ++ + +PA+L + N Sbjct: 202 -----------TNLADSETNFLSAVGQMPDQLERPAPFMAM---MPANLNEARQQMLENS 247 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYL 332 P +R E +A + + AKS YP + + T DN G N H W ++ Sbjct: 248 PILRSAESDIAAAEKQYETAKSTFYP--RFDAELGRTADNDLDGQNGHNNEWQAMLRMRF 305 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED--------KKIVT 384 ++ G K+++ ES + Y++ Q A+ NAL +NE+ Sbjct: 306 NLYSGGSNKADL---ESKS---YLSNQ-----ALDIRNNALRQLNEELGLAWNALNNANA 354 Query: 385 KLQHAVELHKKSMSLSMINYRQ---GRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 ++ A + S S+ RQ G +LLD+LD E +L A R+LA+ Sbjct: 355 QVPIAQQYVDHSTSVRTAYQRQFSLGERTLLDLLDSEN-------ELFTASRRLAE 403 >gi|325168924|ref|YP_004280714.1| type I secretion outer membrane protein, TolC family [Agrobacterium sp. H13-3] gi|325064647|gb|ADY68336.1| type I secretion outer membrane protein, TolC family [Agrobacterium sp. H13-3] Length = 478 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 71/378 (18%), Positives = 160/378 (42%), Gaps = 26/378 (6%) Query: 77 QATERINAAKENILSVRADLFPSSYAS-ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRHI 135 Q TE +N A+ L + SSY++ S R+ P+L N + L K+D + Sbjct: 102 QQTESVNEARAGYLPNMSWGLDSSYSTNRSDRYSPDLNFNVSQMLYDFGKVD-----NRV 156 Query: 136 ESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKF 195 + + A + +QV +A ++ + S I+ + + S+A + K ++L + Sbjct: 157 KIATAGIAGRKSQVMMAVDDLARETAYSVIEIQRNRSLGSVARDQIKDVKAILDLVKSRT 216 Query: 196 TQGATSKLSLVKLEAEIKSIESDIPTLEKS---FRMNVHNISTLLG-YPATEFL-HYMQK 250 +GA+++ L++ EA +++ E+ + +E + + N+S + G ++ L ++ K Sbjct: 217 DKGASTRSDLLQAEARVQAAEATLLEIEGQLSRWEAILANLSGIDGPVDVSDTLPAWLSK 276 Query: 251 QSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA 310 ++ P+ P + + A+I +AK++ P+LSL+ I Sbjct: 277 SCSSTNPDWS-------------RVPAVMQAAADREAATAQIALAKAEGLPTLSLDAGIG 323 Query: 311 LTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 + ++ +S G K+ +++ G + A + +++ ++ + Sbjct: 324 VDV-TELSSFDPDYSVGLKVTGSLYNGGATSARRNMAVQALGASQAAEARALVDILRNLT 382 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ-GRYSLLDILDIERATAKVEVDLS 429 A + I+ + + L +++ L Y + G +LLD+L+ ++ D+S Sbjct: 383 EASSQISSKESLRRSLSTRQSTMRQTRDLYRTQYVELGTRTLLDLLNADQELHAARFDIS 442 Query: 430 IAKRQLAKSYVDLYIAIG 447 K L + +D G Sbjct: 443 NIKYDLHRLNIDCTFNSG 460 >gi|300313718|ref|YP_003777810.1| cobalt-zinc-cadmium resistance cation efflux system outer membrane protein [Herbaspirillum seropedicae SmR1] gi|300076503|gb|ADJ65902.1| cobalt-zinc-cadmium resistance cation efflux system outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 428 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 76/367 (20%), Positives = 149/367 (40%), Gaps = 27/367 (7%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 SL + +AL+QN T+ A + I A + I+ A P ++++ F + +T +T Q Sbjct: 47 SLPAAISLALEQNKTLAAARKEIEAVEATIIQAGARPNPE-FSALMEDFRKSSRT-TTYQ 104 Query: 120 LDSDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178 L I+L G+R IE++ + A + + + +I +Y + ER +A Sbjct: 105 LTQ--PIELGGKRSARIEAAQRTREMALLDYAAKRTEIRAGVIAAYYEVMVAMERQRLAK 162 Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238 ++L L K + +++ + T G S + K S + ++ + + ++T G Sbjct: 163 ELLGLAKTSADMTSRRVTAGKISPVEQTKARVAESSAQLELHQADSDVLLAQKKLATFWG 222 Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298 F Q + +P +I + + P ++ + ++ A I S Sbjct: 223 SVGNAF----QLTDGGVESLPALP-SIAQLTEKVAAGPAVQLAQLEVERRRALARIETSK 277 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFD--KGKIKSNIRRAESSAQEQYI 356 P ++L S D S W G + +P+ D KG ++R + + E I Sbjct: 278 RTPDVTL--SFGNKRDES--NARNMWVVGFSVPIPVLDSNKGNELEALKRVDIARDELSI 333 Query: 357 T---WQETVLNAIKEVENALT-SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 Q + + + NA ++ +IV Q A + + L G+++ L Sbjct: 334 VEVQMQSEAAQSFERLRNAREEAVALRNEIVPGAQSAYQAARTGFEL-------GKFAYL 386 Query: 413 DILDIER 419 D+LD +R Sbjct: 387 DVLDAQR 393 >gi|304322362|ref|YP_003856005.1| hypothetical protein PB2503_00480 [Parvularcula bermudensis HTCC2503] gi|303301264|gb|ADM10863.1| hypothetical protein PB2503_00480 [Parvularcula bermudensis HTCC2503] Length = 436 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 27/203 (13%) Query: 257 PNLYIPINIGIPADLIRNRPDI----RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALT 312 PN +P G+ + RPD+ R ++ L D ++ +L+ +G + L Sbjct: 239 PNSQLPSLSGLIDAALSARPDVLAAQRRRQAALRDGHGRV-------VDALAPSGYVDLA 291 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN-----IRRAESSAQEQYITWQETVLNAIK 367 S P +S G L +PIFD+G+ + +E+ + T +E V +A Sbjct: 292 KQPSEP---LQFSGGGGLAIPIFDRGQAARRRAAARVEESEARLEALSRTAREEVTSARL 348 Query: 368 EVENALTS-INEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 +NAL + I+ +H + L +KS L GR +L D+L R ++ Sbjct: 349 AYQNALQQDADYANDILPSAEHRLTLTQKSFEL-------GRATLTDVLIARRDLVAIQQ 401 Query: 427 DLSIAKRQLAKSYVDLYIAIGSG 449 + A ++ DL A+G+G Sbjct: 402 AKADTAAAAAMAWADLQYAMGAG 424 >gi|311103723|ref|YP_003976576.1| type I secretion outer membrane protein, TolC family protein 1 [Achromobacter xylosoxidans A8] gi|310758412|gb|ADP13861.1| type I secretion outer membrane protein, TolC family protein 1 [Achromobacter xylosoxidans A8] Length = 443 Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust. Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 4/146 (2%) Query: 291 KIGIAKSDLYPSLSLNGSIALTHD----NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRR 346 +I IAKS YP+L+L S D N+ PG + G L +P++ G + S + Sbjct: 265 EIQIAKSGHYPTLNLRASSGSASDAVMRNAAPGKPIDSTIGVVLSIPLYSGGGVSSQVTE 324 Query: 347 AESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ 406 Q+ ++ A++ T + + L+ + + ++ + Y Sbjct: 325 KVQLEQKARHDYEAARRQAVQSARQYYTGVTSGLARIQALEAGEKSSRAAVEANRTGYEV 384 Query: 407 GRYSLLDILDIERATAKVEVDLSIAK 432 G LD+L+ ++ + DL++A+ Sbjct: 385 GVRINLDVLNAQQQLYATQRDLALAR 410 >gi|261855117|ref|YP_003262400.1| type I secretion outer membrane protein, TolC family [Halothiobacillus neapolitanus c2] gi|261835586|gb|ACX95353.1| type I secretion outer membrane protein, TolC family [Halothiobacillus neapolitanus c2] Length = 494 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 75/390 (19%), Positives = 160/390 (41%), Gaps = 49/390 (12%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS---------ISHRFIPN 111 L ++V +A Q + T+L A ++ + +EN R++L P AS I IPN Sbjct: 33 LMEIVTLAEQNDQTLLAAQQKRLSIQENTPIARSNLLPQIGASAGLDYKRTEIKSNGIPN 92 Query: 112 LKT---NSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDI--AKLNVISKLIPSYID 166 T S L ++ + ++ +A+L + A +D A+ +++ + +Y Sbjct: 93 APTVIEGSGRTLGLSLNQVIYNRIDNLNLGIADLQAKQADLDFAAAQQDLLLRASTAYFA 152 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + +A +K + + ++ G + + +A +DI T + Sbjct: 153 VLQANASLQLAIASQTAFKNQLAQAQKRYEVGLVAVTDVANAQANYDKANADIITARNAL 212 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD-----LIRNRPDIRYQ 281 ++T+ G TE ++ + NL P PA+ + + +I Q Sbjct: 213 ENAQSALATITGKEPTEL--------DDVRTNLSTP--RPDPANSNDWVTLAAKQNISLQ 262 Query: 282 EKKLADSVAK--IGIAKSDLYPSLSLNGSIAL----THDNSFPGYNTHWSFGPKLYLPIF 335 ++ +++ I I ++ P++ L G + N N S G ++ +P++ Sbjct: 263 SAQIGGQISQENIAINRAARMPTVDLTGQYGYNSTPSQFNGSESSNVAASIGLQVSVPLY 322 Query: 336 DKGKIKSNIRRAESSA-------QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + G+I + R+A + T Q+ N + V +TSI+E +T Sbjct: 323 NGGRINAKSRQAAYQYQQAQNEIENLRRTVQQGTANDYRGV---ITSISE----ITAYGQ 375 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIE 418 +VE + S++ + Y+ G +++D+L+ + Sbjct: 376 SVESARTSLAATEAGYQVGTRTIVDVLNAQ 405 >gi|312129960|ref|YP_003997300.1| outer membrane efflux protein [Leadbetterella byssophila DSM 17132] gi|311906506|gb|ADQ16947.1| outer membrane efflux protein [Leadbetterella byssophila DSM 17132] Length = 432 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 84/424 (19%), Positives = 169/424 (39%), Gaps = 57/424 (13%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFP---------SSYASISHRFIPN 111 L+ V IAL+ N + A ++++ I A + P S++ ++ FI Sbjct: 25 LDDAVSIALENNYGVQVAQKQVDLVNNRIFKGNAGMTPTLDWNTSINSTFNQVNQNFIDG 84 Query: 112 LKTNSTGQLDS-----DWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNV----ISKLIP 162 N G S + L+ R ++++ L S +I + V IS ++ Sbjct: 85 RVINRFGTSVSPNTSLALQYTLYNGGR-MQATFERLKSLGQLSEIQRQAVLQSTISDVME 143 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y + + + + +QI+ Y++ +L+ ++ G SKL ++ +A++ + +D + Sbjct: 144 AYYNIQRLQSTLGYINQIIHYYEERQKLTEERWQIGRGSKLDFLQSKADLTTQLTDQTNV 203 Query: 223 EKSFRMNVHNISTLLGY-PATEF-------------LHYMQKQSNNFQPNLYIPINIGIP 268 R ++ LLG P +F L+Y++ Q+ + P Sbjct: 204 SIQLRNAKIALNRLLGRDPDADFKVEDRTDDYQLFDLNYLKDQAKSINPEFLA------- 256 Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY-----NTH 323 +R + +I E+K AK L P++ LN S + + G +T Sbjct: 257 ---LRKQEEINQMEQKE---------AKGFLKPTIILNSSFGYNFNYNNAGLISNSQSTG 304 Query: 324 WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIV 383 S G IFD IK NI + +A + E + N ++ A K+++ Sbjct: 305 LSTGLTASWRIFDGKVIKRNIEATKINADIIKLQKDEWMNNLENQITAAFYQYETQKRLL 364 Query: 384 TKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 Q + ++++ +S ++ G ++L+I D + + L A+ L S ++L Sbjct: 365 ELEQQNIATAQENLEISAEKFKLGASTILEINDAQTRYTTIMNRLVTAEYNLRISKLNLL 424 Query: 444 IAIG 447 G Sbjct: 425 TLSG 428 >gi|213028915|ref|ZP_03343362.1| multidrug resistance outer membrane protein MdtQ [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 194 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 261 IPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI---ALTHDNSF 317 +P +G L+ R D++ + S++ I AK+ YP ++L + AL + F Sbjct: 40 LPSQLGY--SLLARRADLQAAHWYIESSLSSIDAAKAAFYPDINLMAFLQQDALHLSDLF 97 Query: 318 PGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 + L LPIFD G++ +N+ A++ + + + V++A+ +V A + + Sbjct: 98 RHSAQQYGITGGLTLPIFDSGRLNANLDIAKAQSNLSIANYNKAVVDAVNDVARAASQV 156 >gi|292490947|ref|YP_003526386.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] gi|291579542|gb|ADE13999.1| outer membrane efflux protein [Nitrosococcus halophilus Nc4] Length = 504 Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust. Identities = 93/431 (21%), Positives = 174/431 (40%), Gaps = 77/431 (17%) Query: 61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQL 120 LN+L++ ALQ N + A ERI+ A + RA+ FP S S+ N QL Sbjct: 88 LNELIQQALQSNPDVASALERIHIADAALAGARAEFFPRLSVSESYGISDNPVQTFMFQL 147 Query: 121 -------DSDWKIDLFGQRRHIES-SLANLDSAYAQV------------DIAKLNVISKL 160 D D+ H + + NL S Q+ ++ L + Sbjct: 148 NQAQLNFDQDFNDPSLTDNFHTQVLAQYNLYSGGRQMAAKRAAAAEREAAVSGLEGVQNQ 207 Query: 161 IPSYIDARHFKERISIAHQILDLYKKNIEL--SHLKFTQ-----GATSKLSLVKLEAEIK 213 + + ++ R+ AH++L + ++ IE HL Q G K ++ +E + Sbjct: 208 LVFRVTEGYY--RLLQAHELLQIGREAIEQVEHHLAIVQTRLRAGTAVKSDVLSVEVRLA 265 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPA---- 269 ++ + F + + ++G P P +P + PA Sbjct: 266 EVQEALIAARNRFELAWMVLDNVVGAPV---------------PRQELPQTV-PPAPGSE 309 Query: 270 ----------DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPG 319 + +R+RP+I +K + A I A++ YP+L L H ++F G Sbjct: 310 RVSELETLIEEALRSRPEIGRLARKREAASAHIRAARAAHYPTLDLT-----AHYDAFTG 364 Query: 320 ----YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-EVENALT 374 +T++ G L +FD G+ +S I++A++ + Q +L+ I+ +V A Sbjct: 365 DLASGDTNFFVGLVAQLTLFDGGRTRSQIQQAQARLH-KLNAQQRGLLSDIELDVRRAYL 423 Query: 375 SINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 + E ++ + AV+ ++S+ I YR +L +++D +V LS A+ + Sbjct: 424 QLQEARERLRVATGAVKQGRESLREIEIRYRAQMATLTELID-------AQVALSRARAR 476 Query: 435 LAKSYVDLYIA 445 A + + IA Sbjct: 477 FANAQAGIEIA 487 >gi|319953622|ref|YP_004164889.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] gi|319422282|gb|ADV49391.1| outer membrane efflux protein [Cellulophaga algicola DSM 14237] Length = 449 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 91/457 (19%), Positives = 175/457 (38%), Gaps = 117/457 (25%) Query: 9 SLFIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINIDTLKWWESFNDTSLNKLVKIA 68 S+ IV L CTVG + G SK KW +L + V+ A Sbjct: 5 SILIVFL--CTVG--------------IATGQSK--------KW-------TLQECVEYA 33 Query: 69 LQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKID- 127 ++ NLTI E+ +N+ ++D F+PNL +S+ ++ D Sbjct: 34 VENNLTI----EQFELDLQNVQLEKSDALGD--------FLPNLNASSSVSGNTGLSFDP 81 Query: 128 ---------LFGQRRHIESSLANLDSA--YAQVDIAKLNVIS--------------KLIP 162 +F S++ D + + AKLN IS + Sbjct: 82 TTNQAVTTTIFTASGGFSSNVTLFDGLRNLHRYNRAKLNAISSQYRLDNLKDDIRLNVAN 141 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 +Y+ KE + + + + +++++ + G ++ L+++EA + E I Sbjct: 142 AYLQVLSNKESLHVFNAQYAVTQQDLKRTKELVDAGVVARGDLLEVEATAATQEQQIVNA 201 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRP------ 276 E S ++ N++ LL A E + + + IP P++++ N P Sbjct: 202 ENSIIISKINLAQLLQITAYENFDIVDE-------SFEIP-----PSEVLTNSPKTIYDK 249 Query: 277 ------DIRYQEKKLADSVAKIGIAKSDLYPSLS--LNGSIALTHDNSFPG--------- 319 DI+ E +A + + I+K L P+L N + + F Sbjct: 250 ALIFRNDIKLSEMNVAIAEKDLKISKGALLPTLGAFFNYNTRYSSQQQFDAGSGQFFRDS 309 Query: 320 ------YNTHWSFGPKLYLPIFDKGKIKSNIR-------RAESSAQEQYITWQETVLNAI 366 N S+G +L +PIF+ +K+NI+ RA++ ++ + + T+ A Sbjct: 310 FKDQLWINDGISYGAQLNIPIFNGFTVKNNIKRSKIGIDRAKNQLEQDKLALETTINQAY 369 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMIN 403 +V++ + +K V + A E K+ + ++N Sbjct: 370 VDVKSFAKAFEAAEKTVEARRLAFEYSKERFDVGLMN 406 >gi|332087794|gb|EGI92920.1| RND efflux system, outer membrane lipoprotein, NodT family [Shigella boydii 3594-74] Length = 314 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 49/254 (19%), Positives = 105/254 (41%), Gaps = 32/254 (12%) Query: 13 VLLAGCTVGPEYTKPHMPLLPTQFSIGNSKNLINID--TLKWWESFNDTSLNKLVKIALQ 70 L++GC + + + PH L P Q + + +L + +WW+ ND L+ L++ L Sbjct: 19 TLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLS 78 Query: 71 QNLTILQATERINAAKE-------------------NILSVRADLFPSSYASISHRFIPN 111 + T+ +A R A+ N V A+ F S YA + P+ Sbjct: 79 GSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYAMDA----PS 134 Query: 112 LK------TNSTGQLDSDWKIDLFG-QRRHIESSLANLDSAYAQVDIAKLNVISKLIPSY 164 L T +T L + +DL+G R + +++ ++A A+ +L++ + + Y Sbjct: 135 LGMDGPYYTEATVGLFAGLALDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLY 194 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 + + + + Q D+ ++ K G +++ A+I +++ I ++ Sbjct: 195 YSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKG 254 Query: 225 SFRMNVHNISTLLG 238 ++ L+G Sbjct: 255 QITETRESLRALIG 268 >gi|153003759|ref|YP_001378084.1| outer membrane efflux protein [Anaeromyxobacter sp. Fw109-5] gi|152027332|gb|ABS25100.1| outer membrane efflux protein [Anaeromyxobacter sp. Fw109-5] Length = 508 Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust. Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 16/203 (7%) Query: 262 PINIGIPAD--------------LIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307 P+ + +PA + RP++ Q ++ + A++ A + L P LS Sbjct: 306 PVRVAVPAGEVAPPADDGSLVEAALAARPELAAQRAQVDAAGAQVRGAWARLAPQLSAGA 365 Query: 308 SIALTHDNSFP-GYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI 366 SI D +P G W L P++D G R+AE+ + L + Sbjct: 366 SI-FASDVPYPTGEQEGWRATVDLTWPLYDGGLRYGKRRQAEAQRAGAEAAAEAQRLAIV 424 Query: 367 KEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEV 426 ++V +AL ++ ++ + + L + + + +Y G S LD++D +V Sbjct: 425 QQVRDALRDVSVARERLRLAETQGRLAGDAAASARRSYEAGVASFLDVIDANDRLYAADV 484 Query: 427 DLSIAKRQLAKSYVDLYIAIGSG 449 L+ A+ + A++ + L A G G Sbjct: 485 QLADARARSAQARISLDRAAGRG 507 >gi|313206507|ref|YP_004045684.1| outer membrane efflux protein [Riemerella anatipestifer DSM 15868] gi|312445823|gb|ADQ82178.1| outer membrane efflux protein [Riemerella anatipestifer DSM 15868] gi|315023552|gb|EFT36556.1| outer membrane efflux protein [Riemerella anatipestifer RA-YM] gi|325336045|gb|ADZ12319.1| outer membrane efflux protein [Riemerella anatipestifer RA-GD] Length = 448 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 60/300 (20%), Positives = 133/300 (44%), Gaps = 23/300 (7%) Query: 156 VISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSI 215 +I K+ +Y ++ + L + ++ +++ + G K+ + ++ Sbjct: 145 IIEKVANAYYQVYQTEQMLQNLQDNLKIVEQTVKIIKGLYDAGLAKKIDYDRALVSSNNV 204 Query: 216 ESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 +++ L + +++ + + ++G P + + + +QS F+P++ I N +D R Sbjct: 205 KANQQQLINAVQLSKNALKFMVGMPMEQEIE-LPEQS--FEPSVLISENSN--SDF-SER 258 Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIA-LTHDNSFPGYN-----THWS---- 325 +++ +K+L K ++S+ YP+ +L + L P ++ +WS Sbjct: 259 TELKVLKKQLELLNWKKKASESEYYPTATLIANYGWLGQGAKMPWWHGEKDKVYWSDIAS 318 Query: 326 FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTK 385 G + +P+F+ KS I + + ++ +E L +NA T + + Sbjct: 319 IGLNISIPVFNGFSTKSKIEKDKIDIEKAQADLREIQLGLDLAYKNAKTQLENSSITIKN 378 Query: 386 LQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 ++ V L ++ M+ + NY+ G +L DIL ER DL+ AK L KS +D +A Sbjct: 379 QENNVRLAEEVMANTRANYQYGLATLNDILGAER-------DLADAKNNLTKSKLDYKLA 431 >gi|224825945|ref|ZP_03699048.1| RND efflux system, outer membrane lipoprotein [Lutiella nitroferrum 2002] gi|224601582|gb|EEG07762.1| RND efflux system, outer membrane lipoprotein [Lutiella nitroferrum 2002] Length = 125 Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 64/119 (53%), Gaps = 4/119 (3%) Query: 334 IFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN-EDKKIVTKLQHAVEL 392 +FD G ++ A ++ +++TVL +EVE++LT+I D++ +++ + Sbjct: 1 MFDGGLTRAKTAEATAAYDASVANYRQTVLQGFQEVEDSLTAIRLLDQQAALQVE-TLAA 59 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVD-LSIAKRQLAKSYVDLYIAIGSGY 450 +++ +++ Y+ G S LD++ ++ E + L+I QLA + V L A+G G+ Sbjct: 60 AREAETIARNQYQAGLVSYLDVVTVQSTRLSAEQNGLAILASQLA-ARVALIKALGGGW 117 >gi|89889564|ref|ZP_01201075.1| outer membrane efflux protein [Flavobacteria bacterium BBFL7] gi|89517837|gb|EAS20493.1| outer membrane efflux protein [Flavobacteria bacterium BBFL7] Length = 444 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 89/423 (21%), Positives = 169/423 (39%), Gaps = 68/423 (16%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS-TG 118 +L + V A++ N++I QA I A+ N PS AS S+ + L N TG Sbjct: 28 TLQECVSYAIENNISIKQADLNIEQAELNKKDALGAFLPSLNASASNSWNTGLTQNVVTG 87 Query: 119 QL------DSDWKID----LF-GQRRHIESSLANLDSAYAQVDIAKL--NVISKLIPSYI 165 L +S + I+ LF G R A ++ Q + +L N++ + SY+ Sbjct: 88 VLQTQTTRNSSYGINSGVTLFNGLRNAYTHQRAKMNILATQYNAEQLEDNILLNVANSYL 147 Query: 166 DARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 + KE + L K +E + G+ + +++++A + E I + + Sbjct: 148 NVLFNKENLKQLETQHQLTAKQLEQTQQLVEAGSLPRGDVLEVQATFANEEQQILAAQNN 207 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI-------GIPADLIRNRPDI 278 ++ ++ +L +F ++ + P+L P + GI A NR +I Sbjct: 208 VVISRITLAQILNLE--DFKNF-----DVADPDLNDPTALILDQGADGIYAAATENRYEI 260 Query: 279 RYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWS------------- 325 + E+ A + + IAK PS+ N+F YNT S Sbjct: 261 KIAEQNTALAEQDLKIAKGARLPSV-----------NAFFNYNTRESDRLNLPFFDQLSL 309 Query: 326 -----FGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDK 380 +G L LPIF+ + +N++R++ + + + + L+ + + A + Sbjct: 310 NDGISYGLSLNLPIFNGWSVTNNVKRSKLNVENNRLQETQAKLDLKQNIYQAYNDAQGSR 369 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYS--LLDILDIERATAKVEVDLSIAKRQLAKS 438 Q A+E + + Y Q RY+ L++ D ++ + L+ A+ L +S Sbjct: 370 LTYQSAQKALEARELAYQ-----YAQERYNVGLMNAFDFNQS----QTQLTNAQSSLLRS 420 Query: 439 YVD 441 D Sbjct: 421 KYD 423 >gi|325105858|ref|YP_004275512.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] gi|324974706|gb|ADY53690.1| outer membrane efflux protein [Pedobacter saltans DSM 12145] Length = 442 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 91/392 (23%), Positives = 161/392 (41%), Gaps = 51/392 (13%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFP--SSYASISHRF-IP----NL 112 +LN+L+ AL+ +++ QA K++I S + FP S+ S +H IP N Sbjct: 35 TLNQLIDYALENRISVKQAEIDEEIGKKDIASALSGWFPQVSANGSYTHNIKIPTTFFNG 94 Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSL--ANLDSAYAQ------VDIAKLNVISKLIPSY 164 + GQ ++ + L ++ + SL A+ S Y + + ++N + + +Y Sbjct: 95 QNLQMGQENTSALV-LQADQQLLNPSLIQASKASKYIRQQNLQNTENVRINAVVDVSKAY 153 Query: 165 IDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEK 224 D +E+I I + + K + +++ G K + + + + ++D + Sbjct: 154 YDILTSEEQIKIIQENITRLLKQYNDAKIRYETGLVDKTDFKRAQIALSNAKADEKRTVE 213 Query: 225 SFRMNVHNISTLLGYPATE--FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD-IRYQ 281 + N+ +LG ATE L + K N I + + D I YQ Sbjct: 214 LRKYKYENLKQILGIGATENISLSFADKSMEN---------EILLDTTKTLSYADRIEYQ 264 Query: 282 EKKLADSVAKIGI--AKSDLYPSLSL---------NGSIALTHDNSFPGYNTHWSFGPKL 330 + S+ K+ KS P+LS + S +DNSFP + G L Sbjct: 265 QLMTTKSLQKVNTQYQKSTFLPNLSAYYNYAWDFRSKSFNNLYDNSFP----RSAAGLTL 320 Query: 331 YLPIFDKGKIKSNIRRAESSAQEQYITWQ----ETVLNAIKEVENALTSINEDKKIVTKL 386 LPIF K I++ S QE+ + W E +NA + A S N + +K Sbjct: 321 SLPIFQGTKRYQQIQK--SKLQEERLDWDVINLENQINAQYSLAKATYSANLNDWKTSK- 377 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 VEL K+ + + Y +G + LD++ E Sbjct: 378 -ENVELSKEVYNTIKLQYDEGIKTYLDLMTAE 408 >gi|260061737|ref|YP_003194817.1| outer membrane protein-like protein [Robiginitalea biformata HTCC2501] gi|88785869|gb|EAR17038.1| Outer membrane protein-like protein [Robiginitalea biformata HTCC2501] Length = 453 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 52/284 (18%), Positives = 114/284 (40%), Gaps = 33/284 (11%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N + +L Y + E ++I + L + + I + F G +KL ++ + ++ + Sbjct: 147 NTVLQLFSVYFEVARLTENVNIFSEALRISRDRITRAEYAFEFGQNTKLDILNAQVDVTN 206 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHY--MQKQSNNFQPNLYIPINIGIPADLI 272 ++ + +++ ++ E M + F P +P G + Sbjct: 207 DSINLLNARQQLANARRDLNVVMSRDLNEVFRVDTMIR----FTP---MPQVEGFIESAM 259 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS---------FPGYNT- 322 N I E+ LA + I I +S P++ L+GS + PG N+ Sbjct: 260 ENNVAILQTERNLAINEYDIKINRSGYLPTIGLSGSYGWNRSQNPPRIFGNFQAPGTNSI 319 Query: 323 --HWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN--- 377 + + G L +FD G ++ A + + Q + ++ L ++++NAL Sbjct: 320 SYNLALGASLTWNLFDGGGTTVRVKNARIAYENQELLQRQVELEVTRDIQNALAIYENRL 379 Query: 378 -----EDKKIVTKLQHAVELHKKSMSL---SMINYRQGRYSLLD 413 +++ ++T Q+ E ++ L + I +RQ + +LL+ Sbjct: 380 EIFHIQEQNVLTN-QNNFERSREQFQLGRITSIEFRQAQINLLN 422 >gi|84516020|ref|ZP_01003381.1| Outer membrane efflux protein [Loktanella vestfoldensis SKA53] gi|84510462|gb|EAQ06918.1| Outer membrane efflux protein [Loktanella vestfoldensis SKA53] Length = 457 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 50/272 (18%), Positives = 112/272 (41%), Gaps = 27/272 (9%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 +V+ + + +Y++ R +E + + L + ++ + +F G ++ + +A + Sbjct: 131 DVLLRAVQAYMNVRREREFVELRQNNQRLITQELQAARDRFDVGEVTRTDVSLAQARLAG 190 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRN 274 +S + + + ++ + +G + S P + A +RN Sbjct: 191 SQSLLAAAQGNLAQSIAEYTAAVGR--------VPSGSGAAAPAPVLQSVQDAKAFALRN 242 Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 P + + +A + + ++ L PSLSLN +A+ + +N G L PI Sbjct: 243 HPAVLQVQHSVAAAELAVQRGEAALRPSLSLNSFVAVDDE-----WNESAQIGLSLGGPI 297 Query: 335 FDKGKIKSNIRRAESSAQEQ-------YITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 ++ G I S IR+ +++ + ++ V NA ++ A S + V+ + Sbjct: 298 YNGGAIASQIRQLQANRDASRAGLHLALLGVEQRVANAYAALQVARASAQASDQQVSAAR 357 Query: 388 HAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 A E ++ SL G + LD+L+ E+ Sbjct: 358 IAFEGVREEASL-------GSRTTLDVLNAEQ 382 >gi|254469651|ref|ZP_05083056.1| type I secretion outer membrane protein, TolC [Pseudovibrio sp. JE062] gi|211961486|gb|EEA96681.1| type I secretion outer membrane protein, TolC [Pseudovibrio sp. JE062] Length = 454 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%) Query: 297 SDLYPSLSLNGSIALTHD-NSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355 S P ++LNGS D N + G + + +L +++ G S +R A EQ Sbjct: 266 SSFMPRVTLNGSANFGDDLNGYEGRSDDYRIMVRLKWNLYNGG-YDSAMR---GRAVEQL 321 Query: 356 ITWQETVLNAIKE----VENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 Q V +E VE A S+ ++ ++ L+ V +++ +S Y G+ SL Sbjct: 322 AEAQARVDRMRRETDEAVEQAWASVQTTRERISALRQTVSANQRVVSGYRQEYNIGQRSL 381 Query: 412 LDILDIERATAKVEVDL 428 LD+L+ E A +DL Sbjct: 382 LDVLNAENALFNSRIDL 398 >gi|160883409|ref|ZP_02064412.1| hypothetical protein BACOVA_01378 [Bacteroides ovatus ATCC 8483] gi|156111129|gb|EDO12874.1| hypothetical protein BACOVA_01378 [Bacteroides ovatus ATCC 8483] Length = 439 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 131/299 (43%), Gaps = 36/299 (12%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L Y+D ++ + + LDL ++ I + TQG K + + E + ++++ + Sbjct: 148 LTGYYLDLYKLNNQLQVLQKNLDLTEQVIRNMESRRTQGTALKNDITRYELQKETLKLQL 207 Query: 220 PTLEKSFRMNVHNISTLLGYPA-TEFL---HYMQKQSNNFQPNLYIPINIGIPADLIRNR 275 ++ + ++ H + T L PA TE + + ++ N + ++ ++ Sbjct: 208 AKVQDARKIMNHQLVTTLHLPAGTEIVPDSTLLNEEVTALAENDW---------QMMASQ 258 Query: 276 PDIRYQEKKLADSV--AKIGIAKSDLYPSLS------LNGSIAL---THDNSFPGYNTHW 324 ++ Q+ +LA + K+ + +S+L P ++ L+G I + DN+F +W Sbjct: 259 SNVGLQQAQLAMKMNEQKVKLERSELLPKIALVAGEHLDGPITIEVPVLDNNF----NYW 314 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIK-EVENALTSINEDK 380 G + + K +R+A+ AQE+Y QE + N ++ N LTS + Sbjct: 315 YVGVGIKYNLSSLFKNNKKVRQAKLNVCRAQEEYSLAQEQIENGVQANYVNFLTSFTD-- 372 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSY 439 + + +VEL ++ +++ Y+ L D+LD ++ L A+ L SY Sbjct: 373 --LRTQEKSVELADQNYNVTSNRYKNDLALLTDMLDASNMKLSADLGLVNARINLIYSY 429 >gi|295097552|emb|CBK86642.1| type I secretion outer membrane protein, TolC family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 494 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 28/187 (14%) Query: 282 EKKLADSVAK--IGIAKSDLYPSLSLNGSIALTHDNSFPGYNT-----------HWSFGP 328 + +L+ +A+ I +A+ P+LSL+ S ++ D S+ G T G Sbjct: 249 QARLSQDLAREQIRLAQDGHLPTLSLSASTGVS-DTSYSGSKTTSQAYDDSNVGQNKVGL 307 Query: 329 KLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIKE----VENALTSINEDKK 381 LP++ G + S +++A+ A EQ + V+ ++ V +++SIN K+ Sbjct: 308 SFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSYNNVNASISSINAYKQ 367 Query: 382 IVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 V Q +++ ++ S+ G +++D+LD + LS A+ Q + ++ Sbjct: 368 AVVSAQSSLDANEAGYSV-------GTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLN 420 Query: 442 LYIAIGS 448 + A+G+ Sbjct: 421 IKQALGT 427 >gi|86143901|ref|ZP_01062269.1| Outer membrane protein-like [Leeuwenhoekiella blandensis MED217] gi|85829608|gb|EAQ48071.1| Outer membrane protein-like [Leeuwenhoekiella blandensis MED217] Length = 445 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 58/302 (19%), Positives = 125/302 (41%), Gaps = 40/302 (13%) Query: 155 NVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKS 214 N + +L Y + E + I Q L++ + ++ + +F G +KL ++ E ++ + Sbjct: 143 NTVLQLFSVYYEVARLTENVEILEQTLEISRNRVKRAGYQFDYGQNTKLEVLNAEVDVTN 202 Query: 215 IESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIG-IPA---- 269 ++ + + +++ +L + N Q + N+ IP Sbjct: 203 DSINLMNTRQLLQNTKRDLNVVL--------------ARNLQAGFAVDTNVTFIPKIQLE 248 Query: 270 ---DLIR-NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSI----ALTHDNSFPGYN 321 DL + N I E + S I +K+ P++ L+GS +++ ++F G + Sbjct: 249 SYIDLAQENNVRILQSESAITLSEYDIQSSKARFLPTVGLSGSYGWNESISPASAFFGGS 308 Query: 322 TH----WSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSIN 377 T W G L +FD G + + A+ + Q + Q+ L +++ NAL + Sbjct: 309 TRQTTGWQGGLSLRWNLFDGGTSITQFKNAKIAKDNQELLKQQIELEVERDIANALGN-- 366 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQG--RYSLLDILDIERATAKVEVDLSIAKRQL 435 L E+ ++++ + N+ + R++L I IE A++ + + + L Sbjct: 367 -----YENLVDVFEIQEQNVITNKNNFERSKERFNLGQITSIEFRQAQINLINAQTNKNL 421 Query: 436 AK 437 AK Sbjct: 422 AK 423 >gi|116621742|ref|YP_823898.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] gi|116224904|gb|ABJ83613.1| outer membrane efflux protein [Candidatus Solibacter usitatus Ellin6076] Length = 508 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 27/134 (20%), Positives = 63/134 (47%), Gaps = 1/134 (0%) Query: 295 AKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQ 354 A ++ P L + +T N + T G + PI+ G+I+++I +A+++ ++ Sbjct: 344 AVAEHLPFLDVAADYGITGINPSQSHGTFAVTG-SVRFPIYRSGRIRADIEQADAALSQR 402 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 +++T A ++V NA+ +N + V + L +++ S +R G +++ Sbjct: 403 RAEYEDTKARAEQDVRNAVLDLNAASQQVRVAESNRGLAAETLQQSRDRFRAGVTDTVEL 462 Query: 415 LDIERATAKVEVDL 428 + + + A E D Sbjct: 463 VQAQESVATAEQDF 476 >gi|319956320|ref|YP_004167583.1| outer membrane efflux protein [Nitratifractor salsuginis DSM 16511] gi|319418724|gb|ADV45834.1| outer membrane efflux protein [Nitratifractor salsuginis DSM 16511] Length = 426 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 20/146 (13%) Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNS-FPGYNTHWSFGP---KLYLPIFD 336 Q K+ AD +A + LYPSL L+ +I + +S F G+N H +G L P+ D Sbjct: 250 QAKRQADELAAKA-EQEKLYPSLHLDANINRGYGDSYFSGHNIHRDYGGIGLTLSAPLLD 308 Query: 337 KGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH--- 393 +I+S Q+ I ++ K + T ++ + L+HA+ LH Sbjct: 309 MPQIRS--------MQKARIHAMKSATELAKTADELKTKAKAMRRQLGLLRHALSLHRHN 360 Query: 394 ----KKSMSLSMINYRQGRYSLLDIL 415 KK + ++ +Y GR +L + L Sbjct: 361 ISNEKKLVEIARRSYEDGRMTLEEYL 386 >gi|253567159|ref|ZP_04844609.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251943990|gb|EES84509.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 484 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 4/151 (2%) Query: 274 NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHD---NSFPG-YNTHWSFGPK 329 NRP+IR E KI + +S+ PS++L G+ +T+ NSF + W+ G Sbjct: 304 NRPEIRSLELAAKIYQQKINVTRSEHLPSVALMGNYMVTNPSVFNSFENKFKGMWNVGVM 363 Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389 + LPI+ G+ ++ A++ A+ ++ +V + +NE K + Q Sbjct: 364 VQLPIWHWGEGIYKVKAAKAEARIAQYQLEDAKEKIELQVNQSAFKVNEAAKKLAMAQKN 423 Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERA 420 +E +++ + I + +G + ++L+ A Sbjct: 424 LEKADENLRYATIGFEEGVIAPSNVLEAHTA 454 >gi|310821662|ref|YP_003954020.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|309394734|gb|ADO72193.1| Outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 446 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 8/171 (4%) Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 K ++ AK +A+ L P+L ++G T++ G + S L +FD G+ + Sbjct: 277 KALEAAAKEPLAR--LLPALGVSGQYRFTNEQGLAGNSGDGSLQLDLTWTLFDGGERYAE 334 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVE--NALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R E AQ + + T L +VE A +++ + + + + A + +K+ + Sbjct: 335 --RREQVAQARATALEATALTRRVDVEIQRAQVALDNAQAALRQSELAAQQARKNAEETG 392 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YRQG + L + D + EV + L + +DL A+ G NP Sbjct: 393 ILYRQGLSTALAVADASLRLFEAEVAQVRTRYALGVALLDLRAAV--GLNP 441 >gi|225872399|ref|YP_002753854.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] gi|225793128|gb|ACO33218.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] Length = 471 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 55/282 (19%), Positives = 123/282 (43%), Gaps = 17/282 (6%) Query: 145 AYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 A A ++ A+ ++I +++ Y + + +A Q D + + L+ ++ Sbjct: 168 AGADLESARRDLILRVVQEYFGLLDAENKAQVARQTRDEAQNFLSLTQKLKAGREVAEAD 227 Query: 205 LVKLEAEIKSIE---SDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYI 261 +VK + +++ + SD L + R+N+ + L P T + + P + Sbjct: 228 VVKAQLDLQQKQRAYSDAQLLAEQARLNLGTL--LFADPRTPYKLAVA-------PAPLL 278 Query: 262 PINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLN---GSIALTHDNSFP 318 + AD +N PD+R + + + A + A+++ PSL+ N G A + P Sbjct: 279 APRSQVEADAAKNNPDLRSAVESMKAARAAVIAARAEYLPSLTFNYTYGVDAPQLAVNGP 338 Query: 319 G--YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSI 376 G N +S + LP++D ++ A+ + +T T I +++ Sbjct: 339 GGVQNLGYSASGGINLPLWDWFSTHDRVQEAKLQRRAAQVTLTATQRTLIAQLQEYYHDA 398 Query: 377 NEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 ++ +T L +V+L ++S+ L+ + Y G + L++++ E Sbjct: 399 QVAEQQMTSLTSSVKLAQESLRLTRLRYSAGEATALEVVNAE 440 >gi|148554018|ref|YP_001261600.1| TolC family type I secretion outer membrane protein [Sphingomonas wittichii RW1] gi|148499208|gb|ABQ67462.1| type I secretion outer membrane protein, TolC family [Sphingomonas wittichii RW1] Length = 494 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 81/428 (18%), Positives = 158/428 (36%), Gaps = 81/428 (18%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQ 119 +L + + +A Q N T+ A + A E++ RA P A+ S+ N+ Q Sbjct: 33 TLREALGLAYQSNPTLTGARAGLRATDEDVGIARAQGLPDVSATGSYNEFVKRSANAFTQ 92 Query: 120 LDSDWKIDLFGQ-------------RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 K L G R I ++ A ++ A + + ++ ++ + +Y+D Sbjct: 93 P----KRSLGGSATVSVPIYQGGFVRNSIRAAKARVEQGRAGLQATESDIFTQTVAAYMD 148 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 + + + + + N++ S +F G ++ + + EA + Sbjct: 149 VIRDTAIVDLNAGNVKVLETNLQASQDRFQVGDLTRTDVAQSEARLAGA----------- 197 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPAD-------LIRNRPDIR 279 R N+ L +L + K + + +P G+P+ + N PD+ Sbjct: 198 RANLRTAQAQLDASRQTYLEVVGKFPDALETPPALP---GLPSTSEDAVDIAVTNNPDLA 254 Query: 280 YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP----------- 328 + + IG+A++ P L+ G+ + Y + G Sbjct: 255 SARQATRAAQYDIGVAEASRMPRLNAVGT------GDYVDYRGTLAGGAAGVRQVDKTAT 308 Query: 329 ---KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAI--------KEVENALTSIN 377 +L +PI+ G + +R+A++ + Q I Q V A+ E AL I+ Sbjct: 309 VSLQLQVPIYQGGGPAAQVRQAQAR-KSQAIENQTAVERAVIADARVAFARYEAALGVID 367 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 V+ + A+E + S+ G +LLD+L+ E+ L AKR Sbjct: 368 SSVSAVSANELALEGVRAEQSV-------GNRNLLDVLNAEQELLNSRSTLVSAKR---- 416 Query: 438 SYVDLYIA 445 D Y+A Sbjct: 417 ---DAYVA 421 >gi|227112897|ref|ZP_03826553.1| agglutination protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 450 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 36/206 (17%) Query: 258 NLYIP--INIGIPADL-------IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGS 308 NL +P I IPA L + N P ++ E + + + +KS YP L N Sbjct: 221 NLVMPDASAIKIPASLDEALRIMLANSPALKSAESDIEATQQQYETSKSTFYPRL--NVE 278 Query: 309 IALTHDNSFPG---YNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNA 365 ++ T DN+ G N W ++ +++ G K+N+ ES A Q Q+ NA Sbjct: 279 LSRTMDNNVDGTRGQNNEWQAMLRMRYNLYEGGSSKANM---ESKAY-QVKEAQDVRNNA 334 Query: 366 IK----EVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQ---GRYSLLDILDIE 418 ++ E++ A +++N ++ +L A E +SM + +Q G +LLD+LD E Sbjct: 335 LRLLSEELKLAWSALNNSRQ---QLPIAAEYADRSMKVRTAYQKQFGLGERTLLDLLDSE 391 Query: 419 RATAKVEVDLSIAKRQLAK-SYVDLY 443 +L A+R+L + + LY Sbjct: 392 N-------ELFTAQRRLVEVRFTSLY 410 >gi|289667829|ref|ZP_06488904.1| TolC protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 460 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 38/182 (20%) Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH--------DNSFPGY 320 A I + P ++ Q+ +++ + A++ A++ P+L+L+GS+ T+ D + + Sbjct: 239 ATAIADNPALKAQQLQVSAAEAQVSAARAGHLPTLNLSGSLGRTNSWGGGTDVDTAAGNF 298 Query: 321 NTHW------SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQ--------------E 360 T+ S G L +PIF G + +R+A S Q T++ + Sbjct: 299 TTNNRNIDTDSIGITLSIPIFAGGATQLAVRQALSQRDIQQDTYEQQKRALDRNTRNAYQ 358 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVEL----------HKKSMSLSMINYRQGRYS 410 TV+ I EVE ++ + Q +E+ +++++ + +NY Q RY+ Sbjct: 359 TVVAGISEVEARRLAVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQLNYAQSRYN 418 Query: 411 LL 412 L Sbjct: 419 FL 420 >gi|71279047|ref|YP_268569.1| outer membrane efflux protein [Colwellia psychrerythraea 34H] gi|71144787|gb|AAZ25260.1| outer membrane efflux protein [Colwellia psychrerythraea 34H] Length = 466 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 3/161 (1%) Query: 276 PDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-THDNSFPGYNTHWSFGPKLYLPI 334 P ++ + K +V I I K YP + L G+ L DN W G + +PI Sbjct: 277 PALKMLDSKEKQAVGLIEIEKGKYYPEVYLYGNYNLYEEDNLASQIAPDWEIGVGVKIPI 336 Query: 335 FDKGKIKSNIRRAESSA-QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELH 393 D ++ A SS Q +Y+ Q V + VE A N+ + L ++ L Sbjct: 337 LDTSGRSGKMKAAHSSVMQIKYLKAQ-AVQDLSVLVEKAYREANQSLEEYQGLASSLALA 395 Query: 394 KKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQ 434 +++ L ++QG + +D++D E A + +A Q Sbjct: 396 NENLRLRTKAFKQGVSTSIDVVDAELFVASIRTQRFVAAYQ 436 >gi|298373743|ref|ZP_06983732.1| outer membrane transport/efflux protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274795|gb|EFI16347.1| outer membrane transport/efflux protein [Bacteroidetes oral taxon 274 str. F0058] Length = 438 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 65/340 (19%), Positives = 144/340 (42%), Gaps = 31/340 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRF----------- 108 +L+ V+ A+ ++T+ Q A ++LS RA L P+ A + + Sbjct: 28 TLDSCVRYAIANSITVKQMEVSHKMASVDLLSARAALLPNLDAGVRQNWSFGRTQTQSGL 87 Query: 109 IPNLKTNSTGQLDSDWKIDLFGQRR--HIESSLANLDSAYAQVDIAKLNVISKLIPSYID 166 N ++TG S I G RR I + +L ++ ++ AK ++ ++ ++ Sbjct: 88 YENRTQSNTGFSVSSSMILFAGGRRINTIAKAKLDLQASLLNIEKAKNDIELQVTSLFLQ 147 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 KE + IA + ++ ++ + L G S L + +++ S I + Sbjct: 148 VLFQKEILRIAQEQFFSTRQQVQKTQLMVESGKVSANRLSDIRSKMASDTLSIVQAAGNL 207 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLY--IPINIGIPADLIRNRPDIRYQEKK 284 R+ + +++ + + + +S + Y +P+ + AD+ P I+ E Sbjct: 208 RLALLDLAQSIEIQDLDSFDIVAPESLDSHYTEYPELPVYKDVSADM----PQIKAAEIN 263 Query: 285 LADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF------------GPKLYL 332 + + + IA++D P++SLN ++ + + N + +F G L + Sbjct: 264 VESARKSLRIAQADYLPTISLNAGLSSNYFYLYQLPNANRTFEEQLKNNLGQYVGLSLNV 323 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 PIFD+ + R+A+ + + +T +++ KE++ A Sbjct: 324 PIFDRLSVVGRERQAKLNIENLRLTLEKSRKQLQKEIQTA 363 >gi|189219528|ref|YP_001940169.1| Outer membrane protein [Methylacidiphilum infernorum V4] gi|189186386|gb|ACD83571.1| Outer membrane protein [Methylacidiphilum infernorum V4] Length = 402 Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust. Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 16/287 (5%) Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208 V K +I +++ +Y + +A L LY++ ++ + G +++ + Sbjct: 93 VQYQKQQLILRVVQAYFGVLQAQANKRVAESELALYEEILKQTEAFLKTGKGDVVAVKEA 152 Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP-INIGI 267 +A +S++ T + + + + ++ P E ++ N PN P + + I Sbjct: 153 KARFDLSQSNLITAKNALNIAKAILERIIHKPVAELADVVEISPMNPTPNSMDPWVKMAI 212 Query: 268 PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFG 327 N+P I+ + L S A++ K +P LSL GS + N+ P N + G Sbjct: 213 A-----NQPLIKQAKALLDASYAQLEQNKRAHWPVLSLMGSSSQLAVNAIP-VNLQVAAG 266 Query: 328 -PKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 L +P++D G+I I+++++ A+ + T A + E A ++ + Sbjct: 267 FLTLSMPLYD-GQIDQRIKQSQAQARATSEALRNTSDQAKLDTEEAFLNLQSSVLQLKSA 325 Query: 387 QHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + A++ + S + Y G S++D+L V DLS AKR Sbjct: 326 KTALDSAQTSYEATKKGYEIGTRSIVDLLT-------VIADLSNAKR 365 >gi|294650435|ref|ZP_06727796.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292823677|gb|EFF82519.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 254 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 73/142 (51%), Gaps = 9/142 (6%) Query: 282 EKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH-WSFGPKLYLPIFDKGKI 340 EK+ A+ + ++K +L+P++ L + S+ G ++ + G +L +P+FD G Sbjct: 78 EKQAAEQ--QFALSKRELWPTVMLTSRAGKQEEASYIGSESNNYMVGVQLNVPLFDDGVN 135 Query: 341 KSNIRRAESSAQ--EQYITWQETVLNA-IKEVENALTSINEDKKIVTKLQHAVELHKKSM 397 ++N+R+A++ Q I E LN ++ L S+ ++K LQ+A++ + ++ Sbjct: 136 RANVRKAQTDVDLSHQKIRSLELDLNQRVQTTYAQLLSVRQNK---NALQNAIDAAEIAL 192 Query: 398 SLSMINYRQGRYSLLDILDIER 419 + + G + D+L+ E+ Sbjct: 193 LYTRKEFELGTKTTFDLLNTEQ 214 >gi|260775397|ref|ZP_05884294.1| type I secretion TolC precursor [Vibrio coralliilyticus ATCC BAA-450] gi|260608578|gb|EEX34743.1| type I secretion TolC precursor [Vibrio coralliilyticus ATCC BAA-450] Length = 439 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 81/414 (19%), Positives = 169/414 (40%), Gaps = 34/414 (8%) Query: 55 SFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKT 114 +F DT L ++ A + + T+L A ++A E + S RA L P + ++ I +T Sbjct: 20 AFADT-LTEIYNQAKENDPTLLSAAATRDSAFEAVNSSRATLLPQINLTAAYD-INQTET 77 Query: 115 NSTGQLDSDWKIDL-FGQRRHIESSLANLDSAY-------AQVDIAKLNVISKLIPSYID 166 ++ + + W +L F Q + SS LD+A A A+ +I ++ +Y D Sbjct: 78 DNVNKDNDAWNANLGFTQELYNRSSWITLDTAEKTARNADATYAAAQQALILRVATAYFD 137 Query: 167 ARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSF 226 ++ + + +E + +F G ++ + +A+ S+ +D + Sbjct: 138 VLKAQDNLVFVQAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQYDSVLADEVLAQNDL 197 Query: 227 RMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLI---RNRPDIRYQEK 283 + + + G T N + P D + + ++ Sbjct: 198 INSYEGLREITGLEHTNL--------NVLDIARFSASKTDAPVDALVEEAQQKNLSLLSS 249 Query: 284 KLADSVA--KIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH---WSFGPKLYLPIFDKG 338 ++A +A KI + S PSL+L+G ++ + G T ++ G L +PI+ G Sbjct: 250 RIAQDIARDKISLQSSGHLPSLTLDGGYTMSETSPDAGNTTETDTFNVGLNLSVPIYSGG 309 Query: 339 KIKSNIRRAE----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHK 394 S ++A+ +++Q+ T++ V K+V +I+ + + V K Sbjct: 310 ATTSLTKQAQFDYVAASQDLEATYRSVV----KDVRAFNNNISASIGALRAYEQTVVSAK 365 Query: 395 KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 ++ + + G +++D+LD R +LS A+ S + L A+G+ Sbjct: 366 SALEATEAGFDVGTRTIVDVLDSTRNLYDANKNLSNARYDYILSVLQLRQAVGT 419 >gi|225871713|ref|YP_002753167.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] gi|225793974|gb|ACO34064.1| outer membrane efflux protein [Acidobacterium capsulatum ATCC 51196] Length = 480 Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 21/190 (11%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL-----THDNSFPGYNTH--W 324 ++ RPD+ K+ + A I +S +P+L+ +G+ L D PGY + W Sbjct: 286 LKQRPDLEALIAKVKSANAVIRQQRSSYFPTLNFSGNGGLDRQYGAQDQLVPGYASGETW 345 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI---TWQETVLNAI----KEVENALTSIN 377 +L +FD G+ + + A + T Q+ + N + VE AL Sbjct: 346 DASLELKWTLFDGGRREHQVAEALAQKAAAQAQIDTLQDDIANQVWTAHTNVETALRQRQ 405 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 +VT + + E + S Y G ++LD++ ++A A+ + A+ QL Sbjct: 406 AAGALVTSAEQSYEATRDS-------YNYGVRNILDVIASQKALAQARAEDVTARAQLLL 458 Query: 438 SYVDLYIAIG 447 +L G Sbjct: 459 QTANLAFQTG 468 >gi|73537336|ref|YP_297703.1| Outer membrane efflux protein [Ralstonia eutropha JMP134] gi|72120673|gb|AAZ62859.1| Outer membrane efflux protein [Ralstonia eutropha JMP134] Length = 489 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 62/298 (20%), Positives = 126/298 (42%), Gaps = 20/298 (6%) Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ DA +ER+ + + + LY + + + + G S+ + KL+ + ++D+ Sbjct: 188 AFYDAVVSQERVQVLSETVALYTRTQQANETRLKAGDVSRADVTKLQLDNLRAQNDMRQA 247 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL--IRNRPDIRY 280 + ++ +G P T + + P+L P P DL + RPD+ Sbjct: 248 MADHMRDKAQLAQAMGVPGTLADNRLVAD----WPSLDEPTP---PVDLEIAQRRPDVTA 300 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGS-----IALTHDNSFPGYNTHWSFGPKLYLPIF 335 E +LA + + +A++ P +++ I+ T+ N + S+G + +P+F Sbjct: 301 AEARLAAAASARDLARAGRVPDVTVGAQYEHYPISETNTN-----GSGNSYGVFVSIPLF 355 Query: 336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKK 395 + RRAE +L A EVE + + + +++ +V + Sbjct: 356 VRHSNGGEARRAEVDYYAALDDRNRVLLEAQNEVERLRNQLEAARLSLRQMRESVVPAAE 415 Query: 396 SMSLSM-INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 S++ S Y +G +LD+LD RA + +D + A+ AK+ A+ S P Sbjct: 416 SVAGSAEFAYTKGATGVLDLLDARRALRQTRLDATNAQGDYAKALSAYRTALQSTTTP 473 >gi|88707102|ref|ZP_01104797.1| Outer membrane efflux protein [Congregibacter litoralis KT71] gi|88698678|gb|EAQ95802.1| Outer membrane efflux protein [Congregibacter litoralis KT71] Length = 390 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 124/289 (42%), Gaps = 24/289 (8%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 ++A +V + VI+++ S+ + +F + I DL + ++ ++ G+ Sbjct: 70 NAAATRVSTVQNAVIAEVASSWYELYYFNRALRIMEGNRDLVQHLERVARTRYQTGSNGH 129 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 +++ + E+ IE+D+ +L + ++ L P+ + Q P +P Sbjct: 130 PDVIRAQVELGKIENDLASLSDRKAPLLARLNAALNRPSQAPVTMPQSA-----PIADVP 184 Query: 263 INIGIPADL-IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY- 320 IN +L I N P++R +A + A A+ + YP S+ T + P Sbjct: 185 INDKALVELVIGNNPELRALSFDVAAATAAKERAEKEFYPDFSIGFDYIATDEARSPNVQ 244 Query: 321 ---NTHWSFGPKLYLPIFDKGKIKSNIRRAES------SAQEQYITWQET-VLNAIKEVE 370 N + + LPI +GK K+ +R +E+ + ++QY+ E ++A+ + Sbjct: 245 GSGNDPIAAAFSMTLPI-QRGKYKAGVRASEARIAGRRAQRDQYLNKLEAGTVSALFRLR 303 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 +A I D T L A E S++ + Y G S D++D +R Sbjct: 304 DARRQI--DLYQTTLLPKANE----SLAATQRAYSTGSLSFADLIDAQR 346 >gi|120553735|ref|YP_958086.1| TolC family type I secretion outer membrane protein [Marinobacter aquaeolei VT8] gi|120323584|gb|ABM17899.1| type I secretion outer membrane protein, TolC family [Marinobacter aquaeolei VT8] Length = 453 Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust. Identities = 51/290 (17%), Positives = 117/290 (40%), Gaps = 24/290 (8%) Query: 143 DSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSK 202 ++A AQ ++A+ +I + +Y + ++ ++ A ++ E + +F G + Sbjct: 113 EAAQAQYNLAQQQLILDVATAYFNVLRAQDTVATARATEAAIQRQYEQAQERFDVGLIAI 172 Query: 203 LSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIP 262 + + A +S E + ++ L G E+ ++ NF P Sbjct: 173 TEVYEARASYDDSKSQRIAAENQLNVAREQLARLTG----EYAEDLENLRENFPLGRPEP 228 Query: 263 INIGI-PADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGY- 320 +N + I+ +L S A + +AKS P++ L +A ++ G Sbjct: 229 MNPNAWETTALDQNWSIQAALSQLNASEANLKVAKSGHLPTVDL---VASYGESELDGAR 285 Query: 321 -----NTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKE-----VE 370 T G +L +P++ G ++ +R+ Q +T E LN ++ Sbjct: 286 NPQQEGTQGVIGLELNVPLYMGGGTQAGVRQ-----QRSLVTAAEQDLNTVRRDVQVNTR 340 Query: 371 NALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERA 420 + ++N + + + L+ + + ++ + Y G +++++LD ERA Sbjct: 341 SLFLTVNNNVETASALEQTIISRRSALDATRAGYDVGTRNIVEVLDAERA 390 >gi|253572501|ref|ZP_04849903.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251837916|gb|EES66005.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 445 Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust. Identities = 73/317 (23%), Positives = 141/317 (44%), Gaps = 36/317 (11%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLF---PSSYASISHRF-------- 108 +L + + A++ N+ I Q N A++N +SV + P+ IS + Sbjct: 32 TLRQCIDYAIEHNIDIRQTA---NEAEQNKISVNTAKWARLPNLNGGISQGWSWGRTASP 88 Query: 109 ----IPNLKTNSTGQLDSDWKIDLF-GQRRHIESSLA--NLDSAYAQVDIAKLNVISKLI 161 + ++STG ++ + LF G + + SLA NL +A ++ AK ++ + Sbjct: 89 KDNSYSDTNSSSTG-VNLSTNVPLFTGLQLSNQYSLAKLNLQAAIEDLNKAKEDIAINVT 147 Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221 +Y+ E +A ++L K ++ G S + + +A + E Sbjct: 148 SAYLQVLFNLELNKVAQNQVELSKDQLKRIKGLHDVGKASPAEVAEAQARVAQDEMTAVQ 207 Query: 222 LEKSFRMNVHNISTLLGYPATE-FLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRY 280 + ++++++ ++S LL P E F+ K+ F+P L P +I I A I +P I+ Sbjct: 208 ADNTYKLSLLSLSQLLELPTPEGFVLENPKEELKFEP-LTAPDDIYIQA--IAYKPGIKA 264 Query: 281 QEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH----DNSFPGY------NTHWSFGPKL 330 E +L S+ I IA+S+ YP LS + + ++ + G+ N S L Sbjct: 265 AEYRLQGSLKNIRIAQSEFYPQLSFSAGLGSSYYTLNGEAESGFARQLKNNLSKSISFNL 324 Query: 331 YLPIFDKGKIKSNIRRA 347 +PIF++ ++ +R A Sbjct: 325 SVPIFNRFSTRNRVRTA 341 >gi|218709291|ref|YP_002416912.1| hypothetical protein VS_1300 [Vibrio splendidus LGP32] gi|218322310|emb|CAV18440.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 484 Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 17/194 (8%) Query: 251 QSNNFQPNLYIPINIGIP-ADLIRNR-----PDIRYQEKKLADSVAKIGIAKSDLYPSLS 304 QS + +P+ + IN +P D+ ++ P ++ E K + + I K YP + Sbjct: 252 QSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIKAEKGKYYPEVY 311 Query: 305 LNGSIALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIKSNIRRAESS-AQEQYITWQE-- 360 L G +L D+S W G + +P+ D + A S+ +Q Q++ Q Sbjct: 312 LYGDYSLYEDDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVSQVQFLKSQAKQ 371 Query: 361 --TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 TVL V+ N+ + V L ++ L ++++SL + QG + L+++D E Sbjct: 372 DLTVL-----VQKTYLEANQAIEEVQGLNSSLSLAQENLSLRKKAFTQGLSNSLEVVDAE 426 Query: 419 RATAKVEVDLSIAK 432 A ++ S A+ Sbjct: 427 LYLASIKTQQSAAR 440 >gi|150025856|ref|YP_001296682.1| outer membrane efflux protein precursor [Flavobacterium psychrophilum JIP02/86] gi|149772397|emb|CAL43877.1| Probable outer membrane efflux protein precursor [Flavobacterium psychrophilum JIP02/86] Length = 437 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 31/327 (9%) Query: 120 LDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQ 179 L++ KI F + I+ L N+D YA+ AK+ + + + + H + +S Sbjct: 103 LNNPAKIQNFATKFEIQQPLINIDGIYAR-QAAKVKMEAFQLQTERTKEHLELDLSKTFM 161 Query: 180 ILDLY--------------KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKS 225 L L K N++L F QG K L+ +E + I + + Sbjct: 162 QLQLAYKAVKVLEKANATGKANLKLVGNYFKQGMVQKTDLLNVEVRVNEITNQLQYA--- 218 Query: 226 FRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINI----GIPADLIRNRPDIRYQ 281 + NV N+S LG+ E + F+P L NI + A L NR DI+ Sbjct: 219 -KSNVQNVSDYLGFLLNE-----DTTNKVFKP-LEELDNIIFIEAVNAQLSDNRKDIQAM 271 Query: 282 EKKLADSVAK-IGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKI 340 KLA++ K + +K + P L+ GS L F + G +L FD K Sbjct: 272 N-KLAEAYKKMLQSSKMNFLPRLNAFGSYELYDHTLFGTSAKGYLVGAQLSWSFFDGYKS 330 Query: 341 KSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLS 400 +A++ Q+ I Q+ + ++ + + + VT + A E +++ + Sbjct: 331 IGKTEKAKADFQKAAIETQQYKAQSQLDLNKTNRQLKDAENKVTLSRLAFEQSEEAYRIR 390 Query: 401 MINYRQGRYSLLDILDIERATAKVEVD 427 + QG D+L E + E++ Sbjct: 391 QNRFSQGLEKTTDLLQSETQMIQKELE 417 >gi|146284129|ref|YP_001174282.1| outer membrane efflux protein TolC, putative [Pseudomonas stutzeri A1501] gi|145572334|gb|ABP81440.1| outer membrane efflux protein TolC, putative [Pseudomonas stutzeri A1501] Length = 495 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 14/125 (11%) Query: 306 NGSIALTHDNSFPGYN--------THWSFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQ 354 N S+ ++ S PG++ S G +L +PI+ G S R A S +++Q Sbjct: 305 NDSLGFSNSQSIPGFDMPRYTGDVEQRSIGLQLNIPIYSGGLTTSQSREAYYQLSQSEQQ 364 Query: 355 YITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI 414 + + V+ + + + A +N D + V + ++ ++ ++ + I Y+ G +++D+ Sbjct: 365 RESLRRQVVESTRNLHRA---VNTDIEQVEARRQSIISNQSALEATEIGYQVGTRNIVDV 421 Query: 415 LDIER 419 LD +R Sbjct: 422 LDTQR 426 >gi|116327564|ref|YP_797284.1| TolC-like outer membrane efflux protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331825|ref|YP_801543.1| TolC-like outer membrane efflux protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120308|gb|ABJ78351.1| TolC-like outer membrane efflux protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125514|gb|ABJ76785.1| TolC-like outer membrane efflux protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 551 Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%) Query: 261 IPINIGIPADLI---RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF 317 IP + + D I +R D++ K+ + + I +++ PSL L+G+ + N Sbjct: 319 IPTDFNVEKDYIYALEHRTDLKNLRKQREIAELNLKIKEAEDMPSLKLSGAYSTRGQNIV 378 Query: 318 -PGYNTH------WSF-------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 P N SF G + P++DKG IK +IR A+ + E L Sbjct: 379 SPQQNVMDTNRGIASFKYPEAYAGFQFSYPLWDKG-IKVDIRNAKLDVENLEKKEAELKL 437 Query: 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDI---LD---- 416 + +E+EN +I K I+ + E K +RQGR++ + + LD Sbjct: 438 SIKEELENRYATILAGKDILEGAKKRREEANKFYRGLSERFRQGRFTAVAVKIALDNVIQ 497 Query: 417 --IERATAKVEVDLSIAKRQLAKSYV 440 ++ A AK+++++ I + +LAK+++ Sbjct: 498 SELQVAQAKIQLNIDILRYELAKNHI 523 >gi|322435153|ref|YP_004217365.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX9] gi|321162880|gb|ADW68585.1| outer membrane efflux protein [Acidobacterium sp. MP5ACTX9] Length = 514 Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTH-----DNSFPGYNTH--W 324 + RPD+ Q ++ + +I +AK P ++L S A T D G + W Sbjct: 312 VAGRPDLAAQAAEIRAAEDRIKVAKGAYKPRITLTASGAQTSIWPTADYGALGRASEPTW 371 Query: 325 SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVT 384 S + +FD G ++ + A+S ++ + E A +EV A + + + Sbjct: 372 SAILGVEWRVFDGGARRNLLESAQSQKRQAQDEYTERHDRATREVWTAYIAF---RTALK 428 Query: 385 KLQHAVELHK---KSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVD 441 K Q AV L + +S S+ Y+ G +L+D++ ER A+ + A+ QL VD Sbjct: 429 KQQAAVALMEAANESYGASLEAYKYGVKNLIDVVTAERQLAQARLSGVSARSQLFLEAVD 488 Query: 442 LYIAIG 447 L G Sbjct: 489 LEFVTG 494 >gi|325276476|ref|ZP_08142238.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] gi|324098398|gb|EGB96482.1| RND efflux system outer membrane lipoprotein [Pseudomonas sp. TJI-51] Length = 116 Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 8/108 (7%) Query: 5 RAIFSLFIV--LLAGCTVGPEYTKPHMPLLPT-----QFSIGNSKNLINIDTLKWWESFN 57 +++ SL + +L GC++ P+Y P P+ +S S ++ + W + F Sbjct: 3 KSLLSLAVTAFILGGCSLIPDYQTPESPVAAQWPQGPAYSPTQSADVAAAEQ-GWRQFFR 61 Query: 58 DTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASIS 105 D +L +L++ +L N + A ++A + RADLFP+ A+ S Sbjct: 62 DPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSANAS 109 >gi|22299148|ref|NP_682395.1| hypothetical protein tlr1605 [Thermosynechococcus elongatus BP-1] gi|22295330|dbj|BAC09157.1| tlr1605 [Thermosynechococcus elongatus BP-1] Length = 491 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 19/194 (9%) Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIR-NRPDIRYQEKKLADSVAKIGIAKSDLYPSLSL 305 Y+ + + + +L PI + +L R N ++ E +L S A + AK+ LYPS+SL Sbjct: 59 YLPSRPDQVKIDLDRPITLNEAIELARRNNRQLQIIEAQLQQSRAVLRQAKAALYPSISL 118 Query: 306 NGSIALTHDNSFPGYNTH-------------WSFGPKLYLPIFDKGKIKSNIRRAESSAQ 352 ++ T + N W+ +L +F G+ ++I+ A+ + Sbjct: 119 QLGMSRTDSAAIRLQNAQLPPPLRLNSTSNTWTSTVQLGYNLFTSGQRDASIKAAQEQLR 178 Query: 353 EQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLL 412 + Q + +EV NA +I E + +V + AV+ + S+ ++ R G + Sbjct: 179 NAELDLQRQLEQLRQEVTNAYYNIQEAEALVRIGEAAVQNSQISLRDAIARERAGLGTQF 238 Query: 413 DILDIERATAKVEV 426 D+L TA+V++ Sbjct: 239 DVL-----TARVQL 247 >gi|86145877|ref|ZP_01064205.1| hypothetical protein MED222_13795 [Vibrio sp. MED222] gi|85836332|gb|EAQ54462.1| hypothetical protein MED222_13795 [Vibrio sp. MED222] Length = 482 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 17/194 (8%) Query: 251 QSNNFQPNLYIPINIGIP-ADLIRNRPDIRYQEKKLADSVAK-----IGIAKSDLYPSLS 304 QS + +P+ + IN +P D+ ++ + Y K+ D+ K I K YP + Sbjct: 250 QSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILDAKEKQASSLIKAEKGKYYPEVY 309 Query: 305 LNGSIALTHDNSFPG-YNTHWSFGPKLYLPIFDKGKIKSNIRRAESS-AQEQYITWQE-- 360 L G +L D+S W G + +P+ D + A S+ +Q Q++ Q Sbjct: 310 LYGDYSLYEDDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVSQVQFLKSQAKQ 369 Query: 361 --TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIE 418 TVL V+ N+ + V L ++ L ++++SL + QG + L+++D E Sbjct: 370 DLTVL-----VQKTYLEANQAIEEVQGLNSSLSLAQENLSLRKKAFTQGLSNSLEVVDAE 424 Query: 419 RATAKVEVDLSIAK 432 A ++ S A+ Sbjct: 425 LYLASIKTQQSAAR 438 >gi|115380499|ref|ZP_01467472.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|115362491|gb|EAU61753.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 372 Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 8/171 (4%) Query: 284 KLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSN 343 K ++ AK +A+ L P+L ++G T++ G + S L +FD G+ + Sbjct: 203 KALEAAAKEPLAR--LLPALGVSGQYRFTNEQGLAGNSGDGSLQLDLTWTLFDGGERYAE 260 Query: 344 IRRAESSAQEQYITWQETVLNAIKEVE--NALTSINEDKKIVTKLQHAVELHKKSMSLSM 401 R E AQ + + T L +VE A +++ + + + + A + +K+ + Sbjct: 261 RR--EQVAQARATALEATALTRRVDVEIQRAQVALDNAQAALRQSELAAQQARKNAEETG 318 Query: 402 INYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452 I YRQG + L + D + EV + L + +DL A+ G NP Sbjct: 319 ILYRQGLSTALAVADASLRLFEAEVAQVRTRYALGVALLDLRAAV--GLNP 367 >gi|255011380|ref|ZP_05283506.1| outer membrane protein [Bacteroides fragilis 3_1_12] gi|313149194|ref|ZP_07811387.1| outer membrane protein [Bacteroides fragilis 3_1_12] gi|313137961|gb|EFR55321.1| outer membrane protein [Bacteroides fragilis 3_1_12] Length = 431 Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 24/186 (12%) Query: 274 NRPDIR--YQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP--- 328 +RP+++ Y K+A+S K+ AK + ++GS S PGY+ H P Sbjct: 254 DRPELKMAYARIKMAESSKKLTDAKYKPQFYVGVDGSY------SSPGYDFHSDLDPNYA 307 Query: 329 ---KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIK-----EVENALTSINEDK 380 KL +P+F+ GK RR E A I LN + EVE A S+++ Sbjct: 308 VYAKLSVPLFEWGK-----RRDEKRAASLKIGMATDNLNQVTDLVKLEVETARVSLSQAL 362 Query: 381 KIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYV 440 + V + ++ ++ +++ Y +G+ S++++++ + +++ AK SY Sbjct: 363 EQVRLTESSLGKALENERMALERYTEGKASVIEVIEAQTYRQASQINHVQAKVSAQGSYS 422 Query: 441 DLYIAI 446 +L A+ Sbjct: 423 ELIRAL 428 >gi|270709129|ref|ZP_06223154.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270315685|gb|EFA27851.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 161 Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/109 (18%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 263 INIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNT 322 +N+ +P +I NRPD++ + +L+ + + +P ++L S++ T + Sbjct: 38 VNLNVPVSVIANRPDVKAAQFRLSSAFKNAKATQKSWFPEVNLGASLSSTASTVGTALHN 97 Query: 323 HWSFGP-KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVE 370 + G + LP + +K N++ +E+ + + +++ + A+ V+ Sbjct: 98 PVAAGTVGISLPFLNWNTVKWNVKISEADYETARLNYEQRITTALNNVD 146 >gi|115374211|ref|ZP_01461497.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] gi|115368754|gb|EAU67703.1| outer membrane efflux protein [Stigmatella aurantiaca DW4/3-1] Length = 468 Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust. Identities = 58/315 (18%), Positives = 129/315 (40%), Gaps = 22/315 (6%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 +++A A V +A+ S L+ + + + +A + ++ ++ ++ + G + Sbjct: 165 GVNAANASVSVARQRTRSALLRALWLGSTAEAFVEVAQRGVNTSEQYVKTAERAVGAGTS 224 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNL 259 L++++ + E+ + ++ +I LLG ++Q Q P L Sbjct: 225 VPLAVLRAQTELARRQKELSEARNKLEAVRLSIGLLLG----------EQQPVQVQLPPL 274 Query: 260 YIPINIGIPA---DLIRNRPDIRYQE--KKLADSVAKIGIAKS--DLYPSLSLNGSIALT 312 +P + A + ++ R ++ QE ++ AD GI + L P+L+ GS+ + Sbjct: 275 EMPGTLAEDALIEEALKARAEVGVQEAMRRAADH----GITSAWWRLAPTLTATGSVFAS 330 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G T W +L ++D G +R+A + + L +E+ NA Sbjct: 331 DTPFLTGDKTGWRAALELTWTLYDGGLRYGKLRQARGNLARVQAEKKGLELQISQEIRNA 390 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L ++ +T + L +++ + ++ G S ++LD + E A+ Sbjct: 391 LREFRLGQEQLTLSERQRALAQEAARTAQSSFEGGVASYTEVLDTLDRLYQAEAGEQEAR 450 Query: 433 RQLAKSYVDLYIAIG 447 +LA + + L A G Sbjct: 451 ARLAIAIITLKTARG 465 >gi|237729537|ref|ZP_04560018.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908143|gb|EEH94061.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 469 Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 34/199 (17%) Query: 261 IPINIGIPADLIRN---------RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIAL 311 +P++ P +L+ N P IR KL +I +AKS YP +S Sbjct: 50 LPLSAAAPGNLMLNDAVSRAVSWHPSIRESIGKLLSQNEQIDVAKSKYYPQVSAG----- 104 Query: 312 THDNSFPGYNTHWSFGPKLYLPI----FDKGKIKSNIRRAESSAQEQYITWQETVLNAIK 367 +N + T F P L + + +D GK+ S +R + A +Q Q VL +I Sbjct: 105 -MNNGYSNTYTDHGFSPALVISVSQMLYDFGKVASQVRAETAGAAQQ----QANVLLSID 159 Query: 368 EV----ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAK 423 + NA+ + +++V + + L+ +G SL D++ + A+ Sbjct: 160 TIAHATANAIVQVQTWQQMVDAAEEQLTALNDIGRLTRQRNDEGATSLSDVVQTD---AR 216 Query: 424 VEVDLSIAKRQLAKSYVDL 442 +E A+ QLA+ +L Sbjct: 217 IES----ARSQLAQYQANL 231 >gi|310818047|ref|YP_003950405.1| outer membrane efflux family protein [Stigmatella aurantiaca DW4/3-1] gi|309391119|gb|ADO68578.1| Outer membrane efflux family protein [Stigmatella aurantiaca DW4/3-1] Length = 470 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 58/315 (18%), Positives = 129/315 (40%), Gaps = 22/315 (6%) Query: 141 NLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT 200 +++A A V +A+ S L+ + + + +A + ++ ++ ++ + G + Sbjct: 167 GVNAANASVSVARQRTRSALLRALWLGSTAEAFVEVAQRGVNTSEQYVKTAERAVGAGTS 226 Query: 201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQ-PNL 259 L++++ + E+ + ++ +I LLG ++Q Q P L Sbjct: 227 VPLAVLRAQTELARRQKELSEARNKLEAVRLSIGLLLG----------EQQPVQVQLPPL 276 Query: 260 YIPINIGIPA---DLIRNRPDIRYQE--KKLADSVAKIGIAKS--DLYPSLSLNGSIALT 312 +P + A + ++ R ++ QE ++ AD GI + L P+L+ GS+ + Sbjct: 277 EMPGTLAEDALIEEALKARAEVGVQEAMRRAADH----GITSAWWRLAPTLTATGSVFAS 332 Query: 313 HDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENA 372 G T W +L ++D G +R+A + + L +E+ NA Sbjct: 333 DTPFLTGDKTGWRAALELTWTLYDGGLRYGKLRQARGNLARVQAEKKGLELQISQEIRNA 392 Query: 373 LTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAK 432 L ++ +T + L +++ + ++ G S ++LD + E A+ Sbjct: 393 LREFRLGQEQLTLSERQRALAQEAARTAQSSFEGGVASYTEVLDTLDRLYQAEAGEQEAR 452 Query: 433 RQLAKSYVDLYIAIG 447 +LA + + L A G Sbjct: 453 ARLAIAIITLKTARG 467 >gi|146305645|ref|YP_001186110.1| TolC family type I secretion outer membrane protein [Pseudomonas mendocina ymp] gi|145573846|gb|ABP83378.1| type I secretion outer membrane protein, TolC family [Pseudomonas mendocina ymp] Length = 480 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 5/119 (4%) Query: 306 NGSIALTHDNSF--PGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 N S+ T+ +F P Y+ + S G +L +P++ G S +R A + + Sbjct: 291 NDSLGFTNSGAFGAPRYSGDVSQRSIGLQLNIPLYSGGLTSSQVREAYQRLGQTEQLRES 350 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++ N ++N D + V + ++ ++ ++ + I Y+ G +++D+LD +R Sbjct: 351 LRRQVVQNTRNLFRAVNTDVETVQARRQSIISNQSALEATEIGYQVGTRNIVDVLDAQR 409 >gi|113476009|ref|YP_722070.1| RND family efflux transporter MFP subunit [Trichodesmium erythraeum IMS101] gi|110167057|gb|ABG51597.1| efflux transporter, RND family, MFP subunit [Trichodesmium erythraeum IMS101] Length = 609 Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%) Query: 132 RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELS 191 R + + AN++SA A+VDIA+ N+ S I + I A +D+ N+ + Sbjct: 290 REGVRVAKANINSAQAKVDIAEANIDSAQAKVDI----AEANIDSAQAKVDIAGSNVRSA 345 Query: 192 HLKFTQGATSKLS-----LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLH 246 + + A + LS L EA++ S +++I + + + NI++ + +++ Sbjct: 346 EARV-ESAQASLSSTIAQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSSDEAR 404 Query: 247 YMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKL 285 +KQ+ Q + P N GI A+ I D+ KKL Sbjct: 405 LEEKQTQLSQTLVKAPAN-GILAERIARVGDVSSSSKKL 442 >gi|330501598|ref|YP_004378467.1| TolC family type I secretion outer membrane protein [Pseudomonas mendocina NK-01] gi|328915884|gb|AEB56715.1| TolC family type I secretion outer membrane protein [Pseudomonas mendocina NK-01] Length = 480 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 5/119 (4%) Query: 306 NGSIALTHDNSF--PGYN---THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQE 360 N S+ T+ +F P Y+ + S G +L +P++ G S +R A + + Sbjct: 291 NDSLGFTNSGAFGAPRYSGDVSQRSIGLQLNIPLYSGGLTSSQVREAYQRLGQTEQLRES 350 Query: 361 TVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIER 419 ++ N ++N D + V + ++ ++ ++ + I Y+ G +++D+LD +R Sbjct: 351 LRRQVVQNTRNLFRAVNTDVETVQARRQSIISNQSALEATEIGYQVGTRNIVDVLDAQR 409 >gi|209886845|ref|YP_002290702.1| outer membrane efflux protein [Oligotropha carboxidovorans OM5] gi|209875041|gb|ACI94837.1| outer membrane efflux protein [Oligotropha carboxidovorans OM5] Length = 423 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 27/302 (8%) Query: 126 IDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLY 184 ++L G+R I + A + SA Q +L V+S+ ++I + RI I + + + Sbjct: 100 VELGGKREARIAAGQAGVGSAVWQRRATRLEVLSETAIAFITVISAQRRIEIFDEQIKSF 159 Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 + I + +GA+S E E + +D+ FR+ T L + Sbjct: 160 DQLIPQLQKRVEEGASSPA-----ETERAQVAADL------FRVERERAKTQLATARRDL 208 Query: 245 LHYMQKQSNNFQPNLYIPINIGIPADL------IRNRPDIRYQEKKLADSVAKIGIAKSD 298 M + + +F + IG P I P + A A++ IA+ Sbjct: 209 AILMGESTPHFGKAIGRLALIGQPPSFRSVVQAIEANPQLMRWTAVTAQRNAELLIARLK 268 Query: 299 LYPSLSLNGSIALTHDNSFPGYNTHW-SFGPKLYLPIFDKGKIKSNIRRAESSAQEQYIT 357 P + S+ H F N + G + LPIFD+ + NI A+ S + Sbjct: 269 AVPDVRF--SVGWRH---FQDTNDNGVRLGVSIPLPIFDQNR--GNIIAAQESLAKTTAE 321 Query: 358 WQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSM-INYRQGRYSLLDILD 416 L I A SIN + L+ +V +S + ++ Y QGR++LL++LD Sbjct: 322 RSINKLVLISIAGRAYDSINGALAEIKLLRSSVIPKARSAAATIQSGYAQGRFTLLELLD 381 Query: 417 IE 418 ++ Sbjct: 382 VK 383 >gi|21672948|ref|NP_661013.1| outer membrane protein, putative [Chlorobium tepidum TLS] gi|21646005|gb|AAM71355.1| outer membrane protein, putative [Chlorobium tepidum TLS] Length = 428 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 62/352 (17%), Positives = 143/352 (40%), Gaps = 33/352 (9%) Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS----------------SYAS 103 +L++ +++ + N QA E +NAA + R+ FP ++ Sbjct: 23 TLDEALRMTREHNPKARQALEELNAADAKVTESRSAWFPQISGKAGYTYLDPVSEMTFGG 82 Query: 104 ISHRFIPNLKTNSTGQLDSDWKIDLFGQRRH-IESSLANLDSAYAQVDIAKLNVISKLIP 162 ++ +F+PN N + ++ + FG+ ++ + A +SA + D+ ++ + Sbjct: 83 LAMKFMPN--NNYNARFTAEMMLYDFGRTASTVDLAKAARNSARLRQDMTLRDLSLATVQ 140 Query: 163 SYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTL 222 ++ +E + + + + + N++ ++ QGA ++ L+ + + + Sbjct: 141 AFYSVLFLQEAVRVQQKEVAALQTNLDHMQKRYDQGAATRFDLLTTQVRLAGAANREIDY 200 Query: 223 EKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQE 282 + R + L G L +F + A + +RP++ Sbjct: 201 QNQLRNQEITLRRLCGLDEKAPLSL----KGSFDITAADMDADKLAASALDHRPEVMLAR 256 Query: 283 KKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSF-PGYN---THWSFGPKLYLPIFDKG 338 + + K +A + P + GS + N + P + T+ + G +L +PIFD Sbjct: 257 ENFKAASYKKNLATREFLPKIV--GSASWGSTNGYVPDLDKMRTNVAVGVELQVPIFDGF 314 Query: 339 KIKSNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQ 387 + + +R A + SA++Q + ++ +++ N L S E K T+LQ Sbjct: 315 RKSAALREATAMKRSAEQQQLDAEQVSQAEVRQSVNDLKSSAE-KIQTTRLQ 365 >gi|207723630|ref|YP_002254028.1| outer membrane efflux protein [Ralstonia solanacearum MolK2] gi|206588833|emb|CAQ35795.1| outer membrane efflux protein [Ralstonia solanacearum MolK2] Length = 316 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 15/218 (6%) Query: 185 KKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 +K + L+ L+ G + + + I ++ +++ ++ V+ L G A Sbjct: 55 EKTLGLTRLRAVSGFAPFADVARAISGIATVRTNLAAQQEQCARQVNAPVALSGTGAATV 114 Query: 245 LHYMQKQSNNF----QPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLY 300 + QP P +PA ++ P + +++ A + A+IG+A+ + Sbjct: 115 RQQILGAGATVGFMPQPPALAPE---LPATVLAAHPTVISADREAAAAWAEIGVARGNRL 171 Query: 301 PSLSLNGSIALTHD---NSFPGYN-THWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYI 356 P L L + LT + N T WS GP L FD G +N+ A++ + Sbjct: 172 PRLDL--AAVLTGQWIRAAGSTLNLTTWSVGPALTGTQFDGGAGAANVCAAQARYRHAVA 229 Query: 357 TWQETVLNAIKEVENALT--SINEDKKIVTKLQHAVEL 392 Q T+ +++VE+ L + +D+ + A+ L Sbjct: 230 RLQGTLRTTVEDVESVLAARASAQDRTVSASEAAAISL 267 >gi|83701798|gb|ABC41338.1| outer membrane protein TolC [Vibrio vulnificus] Length = 441 Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 11/164 (6%) Query: 292 IGIAKSDLYPSLSLNGS---IALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 I +A S PSL+L+G +++ G +++ G L +P++ G S ++AE Sbjct: 265 ISLASSGHLPSLTLDGGYNYADVSNSAQSDGTTNNFNVGVNLVVPLYTGGNTTSQTKQAE 324 Query: 349 ----SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINY 404 S++Q+ T++ +KEV +IN + +V + ++ + + Sbjct: 325 FNYVSASQDLEATYR----GVVKEVRAQNNNINASSVHFRAYEQSVVSARSALEATEAGF 380 Query: 405 RQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448 G +++D+LD R +LS A+ S + L A+G+ Sbjct: 381 DVGTRTIVDVLDATRRLYDANKNLSNARYNYILSVLQLRQAVGT 424 >gi|295134362|ref|YP_003585038.1| outer membrane efflux protein [Zunongwangia profunda SM-A87] gi|294982377|gb|ADF52842.1| outer membrane efflux protein [Zunongwangia profunda SM-A87] Length = 449 Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust. Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 27/307 (8%) Query: 128 LFGQRRHIESSLANLDSAYAQVD--IAKLNVISKLIPSYIDARHFKERISIAHQILDLYK 185 LF Q I A + Q++ + K NVI K+ Y + ++ Y+ Sbjct: 118 LFDQSVFIGLKAAKSSREFYQINQQLTKENVIEKVASQYYHTLILQANLTTVDTT---YQ 174 Query: 186 KNIELSHL---KFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPAT 242 +++ + +F G + + +++ ++ ++++ L+ S +++ + + L G P Sbjct: 175 NTVKIQQIIISQFENGLAKGIDVKRIQVKVANLQAQQQELQNSIQISKNTLKFLTGLPME 234 Query: 243 EFLHYMQKQSNNFQPNLYIPINIGIPADLIR-NRPDIRYQEKKLADSVAKIGIAKSDLYP 301 + ++ S P L P N D N +EK+L + + +K+ YP Sbjct: 235 MMITVTEESS----PRL--PQNEKEAFDFSSLNAYQSLTKEKELRNYA--LQESKAANYP 286 Query: 302 SLSLNGSIALTH-DNSFP-----GYNTHW----SFGPKLYLPIFDKGKIKSNIRRAESSA 351 +LSL+ ++FP +W S L++PIF K ++ IR+A+ Sbjct: 287 TLSLSAQYHYQGLGDTFPIGKDETQQVYWTDYSSITLNLHIPIFSGLKTRAKIRQAQLDV 346 Query: 352 QEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSL 411 + + ++ L+ + ENA I + + Q V L K+ + NY G L Sbjct: 347 ETLQLDIEDKKLSLRADFENAKNQIRTSEITIENQQQNVVLAKEVVEDIQNNYTNGLAPL 406 Query: 412 LDILDIE 418 D+LD E Sbjct: 407 TDVLDAE 413 >gi|119356455|ref|YP_911099.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] gi|119353804|gb|ABL64675.1| outer membrane efflux protein [Chlorobium phaeobacteroides DSM 266] Length = 435 Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust. Identities = 55/277 (19%), Positives = 114/277 (41%), Gaps = 16/277 (5%) Query: 171 KERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNV 230 +E + +A +I + + N+ L L++ G SL + EA++ E D+ ++ + Sbjct: 159 QELVGLAGEIAERRQNNVRLISLRYRGGREHLGSLRQSEADLAEAEFDVSQAKRGLVL-- 216 Query: 231 HNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP--ADLIRNRPDIRYQEKKLADS 288 TLL H + F+ +++ P A L++N P + + K + Sbjct: 217 --AQTLLASALGRDTHKPLRVQGAFK---VADLSVTKPDLALLVKNNPLFQQLDTKSKAA 271 Query: 289 VAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAE 348 + A+S P L L SI +S P N + G + +PI++ G + + +A Sbjct: 272 RFDLDAARSAFSPELYLTSSIGNGSVDSLPFNNLDANAGFTVSVPIYEGGAGRVRVIKAM 331 Query: 349 SSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGR 408 + + + L +E + S + +++V + ++ + +++ Y G Sbjct: 332 AVLSQHNAEEKSGYLQLFNALEESWKSYQDARQMVVVKRKFLDAALERSTIANAQYSNGL 391 Query: 409 YSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445 S D + IE +L AK++ + D+ IA Sbjct: 392 ISFDDWVIIEN-------NLVSAKKEFLNAGADMLIA 421 >gi|299148050|ref|ZP_07041113.1| putative outer membrane efflux protein [Bacteroides sp. 3_1_23] gi|298514233|gb|EFI38119.1| putative outer membrane efflux protein [Bacteroides sp. 3_1_23] Length = 439 Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 133/302 (44%), Gaps = 42/302 (13%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L Y+D ++ + + LDL ++ I + TQG K + + E + ++++ + Sbjct: 148 LTGYYLDLYKLNNQLQVLQKNLDLTEQVIRNMESRRTQGTALKNDITRYELQKETLKLQL 207 Query: 220 PTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPA------DLI 272 ++ + ++ H + T L PA TE + P+ + +N + A ++ Sbjct: 208 AKVQDTRKIMNHQLVTTLHLPAGTEIV-----------PDSTL-LNEEVTALAENDWQMM 255 Query: 273 RNRPDIRYQEKKLADSV--AKIGIAKSDLYPSLS------LNGSIAL---THDNSFPGYN 321 ++ ++ Q+ +LA + K+ + +S+L P ++ L+G I + DN+F Sbjct: 256 ASQSNVGLQQAQLAMKMNEQKVKLERSELLPKIALVAGEHLDGPITIEVPVLDNNF---- 311 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIK-EVENALTSIN 377 +W G + + K +R+A+ AQE+Y QE + N ++ N LTS Sbjct: 312 NYWYVGVGIKYNLSSLFKNNKKVRQAKLNVRRAQEEYSLAQEQIENGVQANYVNFLTSFT 371 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + + + +VEL ++ +++ Y+ L D+LD ++ L A+ L Sbjct: 372 D----LRTQEKSVELADQNYNVTSNRYKNDLALLTDMLDASNMKLSADLGLVNARINLIY 427 Query: 438 SY 439 SY Sbjct: 428 SY 429 >gi|169144771|gb|ACA49156.1| EsfC [Serratia marcescens] Length = 458 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 58/300 (19%), Positives = 126/300 (42%), Gaps = 18/300 (6%) Query: 154 LNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIK 213 L++ ++I +Y++ + K++I++A YK+ + L+ + G + + + +A Sbjct: 143 LDLAVRVISAYVEVAYSKDQIALAEAQKTAYKEQLALNDRLMSAGEGTLTDVSETQARYS 202 Query: 214 SIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADL-I 272 E+ + + + ++G P + + FQ IP + + Sbjct: 203 LAEAQVIEARDALDAAQRELEVIIGVPLNQLDELQVLRPGKFQVAPLIPSKFEEWQKIAL 262 Query: 273 RNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHW---SFGPK 329 N P + + + ++ ++ P++ L S + +S N + S G + Sbjct: 263 ENNPVLAASRHGVDAAKYEVERNRAGFMPNVQLYASHSENDSSSDNTVNQKYRTDSIGVQ 322 Query: 330 LYLPIFDKGKIKSNIRRAES---SAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKL 386 + LPI+ G + ++ R+A + A + T + LN +++ N I+ K+ Sbjct: 323 VSLPIYSGGGVAASTRQAAARYGQAMAEMDTQVGSTLNDLRKQFN--LCISSRAKLA--- 377 Query: 387 QHAVELHKKSMSLSMINYRQ----GRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDL 442 A EL KS + + RQ G+ +D+L+ E+ + DL+ AK KS++ L Sbjct: 378 --AYELAVKSATTQVTATRQSVLAGQRVNVDVLNAEQQLYSAQRDLASAKYTYIKSWITL 435 >gi|237720193|ref|ZP_04550674.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450745|gb|EEO56536.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 439 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 133/302 (44%), Gaps = 42/302 (13%) Query: 160 LIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI 219 L Y+D ++ + + LDL ++ I + TQG K + + E + ++++ + Sbjct: 148 LTGYYLDLYKLNNQLQVLQKNLDLTEQVIRNMESRRTQGTALKNDITRYELQKETLKLQL 207 Query: 220 PTLEKSFRMNVHNISTLLGYPA-TEFLHYMQKQSNNFQPNLYIPINIGIPA------DLI 272 ++ + ++ H + T L PA TE + P+ + +N + A ++ Sbjct: 208 AKVQDARKIMNHQLVTTLHLPAGTEIV-----------PDSTL-LNEEVTALAENDWQMM 255 Query: 273 RNRPDIRYQEKKLADSV--AKIGIAKSDLYPSLS------LNGSIAL---THDNSFPGYN 321 ++ ++ Q+ +LA + K+ + +S+L P ++ L+G I + DN+F Sbjct: 256 ASQSNVGLQQAQLAMKMNEQKVKLERSELLPKIALVAGEHLDGPITIEVPVLDNNF---- 311 Query: 322 THWSFGPKLYLPIFDKGKIKSNIRRAE---SSAQEQYITWQETVLNAIK-EVENALTSIN 377 +W G + + K +R+A+ AQE+Y QE + N ++ N LTS Sbjct: 312 NYWYVGVGIKYNLSSLFKNNKKVRQAKLNVRRAQEEYSLAQEQIENGVQANYVNFLTSFT 371 Query: 378 EDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAK 437 + + + +VEL ++ +++ Y+ L D+LD ++ L A+ L Sbjct: 372 D----LRTQEKSVELADQNYNVTSNRYKNDLALLTDMLDASNMKLSADLGLVNARINLIY 427 Query: 438 SY 439 SY Sbjct: 428 SY 429 >gi|255622578|ref|XP_002540293.1| conserved hypothetical protein [Ricinus communis] gi|223497140|gb|EEF22089.1| conserved hypothetical protein [Ricinus communis] Length = 129 Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 8/124 (6%) Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYIT-WQETVLNAIKEVENALTSINEDKKIVTKLQH 388 + LPIFD GK ++N+ AE++ + + + T+L A++ + N L+ +N Q Sbjct: 1 MSLPIFDGGKRRANL-SAETALYDMAVEDYNATILKALESISNQLSILNTVAIETDNTQQ 59 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLA---KSYVDLYIA 445 A+ +++ L++ NYR G +L++ L + A V S+ Q A ++Y L +A Sbjct: 60 ALAKTEQAHRLAVKNYRAGLSNLVESL---QTNALVLQQKSVLVEQEAVRLEAYAALMLA 116 Query: 446 IGSG 449 +G G Sbjct: 117 LGGG 120 >gi|91218529|ref|ZP_01255467.1| outer membrane efflux protein [Psychroflexus torquis ATCC 700755] gi|91183319|gb|EAS69724.1| outer membrane efflux protein [Psychroflexus torquis ATCC 700755] Length = 455 Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 16/169 (9%) Query: 270 DLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSF--- 326 D+I NR D R E I +++ YP+L S+ G + W+F Sbjct: 272 DVIGNRIDYRLLEANTYLQELDIKNKQAEYYPTLDFRAGY------SYFGSSDEWTFQDN 325 Query: 327 -------GPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINED 379 L +PIF G KS + +A+ + + QE ++ E++N ++E+ Sbjct: 326 QNKIIYAAVTLTVPIFSGGFRKSQVSKAKIVSNITSLEKQEAKMSMTIEIQNLELKLSEE 385 Query: 380 KKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDL 428 + + E KK+ +++ + G S +D+ +I + E++L Sbjct: 386 YETIQAATSTGETAKKAYEIAVETAKSGLISQIDLRNISDDYNRAEINL 434 >gi|282890293|ref|ZP_06298823.1| hypothetical protein pah_c014o189 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499950|gb|EFB42239.1| hypothetical protein pah_c014o189 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 403 Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%) Query: 281 QEKKLADSVAKIGIA-------KSDLYPSLSLNGSIALTHDNSFP-GYNTHWSFGPKLYL 332 Q K+LA +A+ A K + YP L L+ I D + P Y + Sbjct: 221 QNKELAAQLARYHAAIQVYREIKGEQYPELDLDSWIQHNRDQAIPHEYTNEIVAELSFTM 280 Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392 P++ G++K+ +R A + AQ++++ + E + A ++ K +T + +E Sbjct: 281 PLYQAGRVKARMREAAALAQKEWLIYLEIEKFIRQYCVQAWENLETSKFQITAYKTQLET 340 Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKR 433 + ++ G ++LDIL+ E +V+L A+R Sbjct: 341 AEVALKGVQEEESAGMRTILDILNAEFEVLYAKVNLIDARR 381 >gi|71906804|ref|YP_284391.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] gi|71846425|gb|AAZ45921.1| Outer membrane efflux protein [Dechloromonas aromatica RCB] Length = 462 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 21/177 (11%) Query: 275 RPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGPKLYLPI 334 RPD+R E +L + A I +A++ P++SL + +S S G L +PI Sbjct: 277 RPDLRAAEAQLKAAEASIDLARAQGRPTISLGAGP--SWQDSAGVITQGGSVGLTLSVPI 334 Query: 335 FDKGKIKSNIRRAESSAQEQYITWQ------ETVLNAIKEVENALTSINEDKKIVTKLQH 388 F +R A SAQ T Q + L+ K ++ LT+ + K L Sbjct: 335 FSGFDTTYRVRSA--SAQADVRTAQRDRIRNQIALDVWKAYQS-LTTATQSLKTTADLVA 391 Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATA-------KVEVDLSIAKRQLAKS 438 + E +S +++ Y+ G ++LD+L + A A + ++D ++ + LA++ Sbjct: 392 SAE---QSAQVALGRYKAGVGTVLDLLSAQSALASARLQRIQAQLDWNVYRATLAQA 445 >gi|293371125|ref|ZP_06617662.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] gi|292633783|gb|EFF52335.1| outer membrane efflux protein [Bacteroides ovatus SD CMC 3f] Length = 431 Score = 40.4 bits (93