PSIBLAST alignment of GI: 254780930 and protein with PDB id: 1yc9

>gi|61680586|pdb|1YC9|A Chain A, The Crystal Structure Of The Outer Membrane Protein Vcec From The Bacterial Pathogen Vibrio Cholerae At 1.8 Resolution Length = 442

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/422 (17%), Positives = 168/422 (39%), Gaps = 13/422 (3%)

Query: 42  KNLINIDTLKWWESFNDTSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSY 101
           +  ++  +  WW+ + D  LN L++ ALQ + ++  A  R+  A+       A       
Sbjct: 16  QAEMDWPSANWWQRYQDAQLNHLIEEALQHSPSLCMAMARLKGAQGFARQAGAIRSFDLG 75

Query: 102 ASI----------SHRFIPNLKTNSTGQLDSDWKIDLFGQRRHIES---SLANLDSAYAQ 148
            +                P    N  G L  +++ D     ++  +   + + L +A A+
Sbjct: 76  LAASATESKVSERYQSATPPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAE 135

Query: 149 VDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKL 208
              A+L + + +  +Y +           H  L +  K +EL   ++  G  +  S+ + 
Sbjct: 136 SVAARLMISTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQA 195

Query: 209 EAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIP 268
           +A   S+E+++  +++S ++  + ++ L+G          +                   
Sbjct: 196 KAVAASVEAELLGIQESIQLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGL 255

Query: 269 ADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTHWSFGP 328
                +    R++ +  A  V              +  G  A   D+ F   N   + GP
Sbjct: 256 LGHRADITAARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGP 315

Query: 329 KLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQH 388
            +YLP+F  G+++  +  AE+  QE    +  T++ A+ E+ + +TS    +  + K + 
Sbjct: 316 AIYLPLFTGGRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQ 375

Query: 389 AVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448
           AV+  ++++ ++   Y+ G  + LD+L  E +    +  L   + +     + L  A+G 
Sbjct: 376 AVQQAEQALHIATNRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGG 435

Query: 449 GY 450
           G+
Sbjct: 436 GF 437