PSIBLAST alignment of GI: 254780930 and protein with PDB id: 3pik
>gi|321159981|pdb|3PIK|A Chain A, Outer Membrane Protein Cusc Length = 446
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 105/442 (23%), Positives = 197/442 (44%), Gaps = 18/442 (4%)
Query: 18 CTVGPEYTKPHMPLLPTQFSIGNSK---NLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74
C++ P+Y +P MP +P QFS+ + N W F D + L+ AL N
Sbjct: 1 CSLAPDYQRPAMP-VPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRD 59
Query: 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNS------TGQLDSDWKIDL 128
+ AT ++ A+ AD +P S + NLK N+ + L++ + +D
Sbjct: 60 LRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTGLNASFDLDF 119
Query: 129 FGQ-RRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKN 187
FG+ + E+ N + + ++S + SY + + ++ IA + L Y+++
Sbjct: 120 FGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQS 179
Query: 188 IELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHY 247
+ G+++ L+L + I+S SDI + + + LLG +
Sbjct: 180 YAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG----SYGKL 235
Query: 248 MQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNG 307
Q Q+ N + + G+ + ++ RPDI E L + A IG A++ +PS+SL
Sbjct: 236 PQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTS 295
Query: 308 SIALTHDNS---FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLN 364
I+ + F + W+F PK+ +PIF+ G+ ++N+ AE Q+ + +++ + N
Sbjct: 296 GISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQN 355
Query: 365 AIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKV 424
A KEV +AL ++ Q + + ++ + Y+ G S L++LD ER+
Sbjct: 356 AFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFAT 415
Query: 425 EVDLSIAKRQLAKSYVDLYIAI 446
L + + LY A+
Sbjct: 416 RQTLLDLNYARQVNEISLYTAL 437