RPSBLAST alignment for GI: 254780930 and conserved domain: TIGR01844
>gnl|CDD|162556 TIGR01844, type_I_sec_TolC, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). Length = 415
Score = 73.9 bits (182), Expect = 8e-14
Identities = 75/413 (18%), Positives = 159/413 (38%), Gaps = 51/413 (12%)
Query: 59 TSLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYAS--ISHRFIPNLKTNS 116
+L V +AL N + A + +A +E + RA L P + + ++
Sbjct: 3 LTLLDAVLLALANNPELRAARAQRDAGEEQVAQARAALLPQLGLTANYGYSNTYPTESRG 62
Query: 117 TGQLDS--DWKIDL------FGQRRHIESSLANLDSAYAQVDIAKL-------NVISKLI 161
+ + L G + +A A A+ ++I +
Sbjct: 63 RNTDLNSGSSTLTLSQPLFDGGSTW------NAVRAAEAAALAARETLRATAQDLILRTA 116
Query: 162 PSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPT 221
+Y++ +E +++A L K+ ++L+ +F G ++ +++ EA S +
Sbjct: 117 EAYMEVLRAQEILALAEANLAALKEQLDLARARFDVGLGTRTDVLQAEARYASARAQ--- 173
Query: 222 LEKSFRMNVHNIST----LLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD 277
+ N+ + L+G P L +F L P++ + + P
Sbjct: 174 -LIQAQNNLDDAKAQLRRLVGQPELAPL-----AVPSFPAELPEPLDQLLEIAE-ASNPL 226
Query: 278 IRYQEKKLADSVAKIGI--AKSDLYPSLSLNGSIALTHDNSFPGYN---THWSFGPKLYL 332
+ + A A+ + A++ P+LSL S + +S N +S G + +
Sbjct: 227 LLAA--QAAVDAARYQVEQARAGHLPTLSLTASTGNSDTSSGGSGNSDSDTYSVGLNVSI 284
Query: 333 PIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVEL 392
P++ G + +R+A + T + ++V NA +++N V + V
Sbjct: 285 PLYQGGATSAQVRQAAHQLNQSRSTLESQKRTVRQQVRNAWSNLNAAAASVQAYEQQVAS 344
Query: 393 HKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIA 445
+K++ Y+ G +LLD+L+ E+ +L A+++LA + D A
Sbjct: 345 AQKALDAYRQEYQVGTRTLLDVLNAEQ-------ELYQARQELANARYDYLQA 390