RPSBLAST alignment of GI: 254780930 and protein with PDBid: 3d5k
>3d5k_A OPRM, outer membrane protein OPRM; channel, beta-alpha-barrel, antibiotic resistance, lipoprotein, palmitate, transmembrane, transport; 2.40A {Pseudomonas aeruginosa} PDB: 1wp1_A Length = 474
Score = 182 bits (461), Expect = 2e-46
Identities = 96/457 (21%), Positives = 190/457 (41%), Gaps = 27/457 (5%)
Query: 18 CTVGPEYTKPHMPLLPTQFSIG------NSKNLINIDTLKWWESFNDTSLNKLVKIALQQ 71
C++ P+Y +P P+ + G + + W E F D L +L+ +AL+
Sbjct: 1 CSLIPDYQRPEAPV-AAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALEN 59
Query: 72 NLTILQATERINAAKENILSVRADLFPSSYASISH---RFIPNLKTNSTGQLDSDWKIDL 128
N + A + A + RADLFP S R +L T + + S + + L
Sbjct: 60 NRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTL 119
Query: 129 ----------FGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAH 178
R + +L + A+ +++ + +Y+ + + ++ +
Sbjct: 120 GTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTK 179
Query: 179 QILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLG 238
L Y+K+ +L+ + G S L L + + ++ + + + + + + LLG
Sbjct: 180 DTLGTYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLG 239
Query: 239 YPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKIGIAKSD 298
L + G+P+DL++ RPDI E +L + A IG A++
Sbjct: 240 SGIPANLPQGLGLDQTLLT----EVPAGLPSDLLQRRPDILEAEHQLMAANASIGAARAA 295
Query: 299 LYPSLSLN---GSIALTHDNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQY 355
+PS+SL G+++ F + W F P + LPIF G +++++ A+
Sbjct: 296 FFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINV 355
Query: 356 ITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL 415
+++ + A +EV + L + + + + V+ + L+ YR G + L +L
Sbjct: 356 AQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDLVKASDEYYQLADKRYRTGVDNYLTLL 415
Query: 416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP 452
D +R+ + L + S V+LY A+G G+N
Sbjct: 416 DAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWNQ 452