HHsearch alignment for GI: 254780931 and conserved domain: pfam09556
>pfam09556 RE_HaeIII HaeIII restriction endonuclease. This family includes the HaeIII (recognizes and cleaves GG^CC) restriction endonuclease.
Probab=95.33 E-value=0.022 Score=34.52 Aligned_cols=52 Identities=25% Similarity=0.590 Sum_probs=47.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8765499999999999754202334245532053228999999999999998
Q gi|254780931|r 2 DYPCNKEYFKTISTVFGKLGDMRAQNIFLKDIKDKDIIFYLHILIAFEKVID 53 (56)
Q Consensus 2 dypcnkeyfktistvfgklgdmraqniflkdikdkdiifylhiliafekvid 53 (56)
T Consensus 132 gipcSq~Ywd~I~PiF~~Le~~k~~g~~w~~i~~KEe~vYvPLL~AFi~El~ 183 (300)
T pfam09556 132 GIPSSQNYFDEINPLFEELEELKKEGELWRNISNKEERIYVPLLKAFIREIE 183 (300)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEHHHHHHHHHHHHH
T ss_conf 8975076787777899999999862860111766320151999999999999