RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780932|ref|YP_003065345.1| hypothetical protein CLIBASIA_04155 [Candidatus Liberibacter asiaticus str. psy62] (236 letters) >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone/growth factor complex; 1.50A {Homo sapiens} (A:110-322) Length = 213 Score = 31.7 bits (70), Expect = 0.092 Identities = 14/45 (31%), Positives = 24/45 (53%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSNNVQTQVPARDE 45 QYN PS EI++SI+ +E +E S + + ++P +E Sbjct: 167 CWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKLPEPEE 211 >1y6a_A Vascular endothelial growth factor receptor 2; transferase; HET: AAZ; 2.10A {Homo sapiens} PDB: 1y6b_A* 3hng_A* (A:115-366) Length = 252 Score = 28.4 bits (62), Expect = 0.90 Identities = 6/29 (20%), Positives = 12/29 (41%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQE 29 P+ E+V + +L+ N Q+ Sbjct: 223 CWHGEPSQRPTFSELVEHLGNLLQANAQQ 251 >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} (A:169-370) Length = 202 Score = 27.4 bits (59), Expect = 1.7 Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQE 29 P+ +++V + RIL E Sbjct: 173 CWHAVPSQRPTFKQLVEDLDRILTLTTNE 201 >3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* (A:) Length = 303 Score = 27.4 bits (59), Expect = 1.7 Identities = 2/27 (7%), Positives = 9/27 (33%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENND 27 N + + I ++ ++ + Sbjct: 274 CWYANGAARLTALRIKKTLSQLSQQEG 300 >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} (A:109-327) Length = 219 Score = 27.1 bits (58), Expect = 1.9 Identities = 8/33 (24%), Positives = 15/33 (45%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTS 33 + PS +I+ S+ R+LE +T+ Sbjct: 169 CWREKPYERPSFAQILVSLNRMLEERKTYVNTT 201 >3ewh_A Vascular endothelial growth factor receptor 2; angiogenesis, receptor tyrosine kinase, DFG-OUT, transferase; HET: K11; 1.60A {Homo sapiens} PDB: 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* 3dtw_A* 3be2_A* 2p2i_A* 1ywn_A* 1vr2_A* 3c7q_A* 2oh4_A* 3cjf_A* 3cjg_A* (A:106-314) Length = 209 Score = 27.2 bits (59), Expect = 2.0 Identities = 6/35 (17%), Positives = 14/35 (40%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSNN 35 P+ E+V + +L+ N Q+ ++ Sbjct: 173 CWHGEPSQRPTFSELVEHLGNLLQANAQQDRHHHH 207 >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} (B:124-342) Length = 219 Score = 26.9 bits (58), Expect = 2.3 Identities = 2/27 (7%), Positives = 9/27 (33%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENND 27 N + + I ++ ++ + Sbjct: 190 CWYANGAARLTALRIKKTLSQLSQQEG 216 >1sm2_A Tyrosine-protein kinase ITK/TSK; immunology, transferase; HET: STU; 2.30A {Homo sapiens} (A:83-264) Length = 182 Score = 26.5 bits (57), Expect = 3.0 Identities = 3/26 (11%), Positives = 9/26 (34%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENN 26 + P+ ++ + I E+ Sbjct: 156 CWKERPEDRPAFSRLLRQLAEIAESG 181 >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2ivv_A* (A:108-314) Length = 207 Score = 26.4 bits (57), Expect = 3.2 Identities = 2/26 (7%), Positives = 8/26 (30%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENN 26 + P +I + +++ Sbjct: 181 CWKQEPDKRPVFADISKDLEKMMVKR 206 >3e64_A Tyrosine-protein kinase JAK2; drug discovery, fragment based, ATP-binding, chromosomal rearrangement, disease mutation, membrane; HET: PTR 5B3; 1.80A {Homo sapiens} PDB: 3e62_A* 3e63_A* 2b7a_A* 3fup_A* (A:95-293) Length = 199 Score = 26.1 bits (56), Expect = 3.8 Identities = 5/25 (20%), Positives = 10/25 (40%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILEN 25 N PS ++ + +I +N Sbjct: 173 CWNNNVNQRPSFRDLALRVDQIRDN 197 >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} (A:1221-1330,A:1541-1688) Length = 258 Score = 26.4 bits (58), Expect = 3.9 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 6/58 (10%) Query: 179 FDQLVKALRESESRSLDQLSLDVLRPMLREWLDDNLPGIVERLVREEIERIARGPIRH 236 +++ L+ L L+ + E D ++ER EI A +R Sbjct: 33 LVTREAQIKDWVENELEALKLEAEE-IPSE---DQNEFLLERT--REIHNEAESQLRA 84 >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, signal, transferase, phosphorylation, transmembrane, tyrosine- protein kinase; HET: PTR; 2.15A {Homo sapiens} (A:132-325) Length = 194 Score = 26.1 bits (56), Expect = 4.2 Identities = 4/34 (11%), Positives = 14/34 (41%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSN 34 + P +IV+ + ++ + + +T+ Sbjct: 159 CWHKDRAQRPRFSQIVSVLDALIRSPESLRATAT 192 >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 2i0y_A* 2i0v_A* 3dpk_A* 2ogv_A (A:1-33,A:133-333) Length = 234 Score = 26.0 bits (56), Expect = 4.4 Identities = 3/29 (10%), Positives = 12/29 (41%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQE 29 P+ ++I + ++ + + +E Sbjct: 204 CWALEPTHRPTFQQICSFLQEQAQEDRRE 232 >1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} (A:1-52,A:193-396) Length = 256 Score = 25.8 bits (56), Expect = 5.3 Identities = 10/56 (17%), Positives = 21/56 (37%) Query: 19 IRRILENNDQEFSTSNNVQTQVPARDEGVIEKEDFVQEDKMSNHLFADQNSHLKKY 74 I+ + + +F + P +D + E + E + L+ D SH + Sbjct: 197 IKWSDQLXEXDFQETITFLQNPPTKDWTETDIEXLLSEAFIWQSLYKDATSHWLHH 252 >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ABG; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3c4f_A* (A:123-334) Length = 212 Score = 25.9 bits (55), Expect = 5.6 Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQE 29 P+ +++V + RIL E Sbjct: 173 CWHAVPSQRPTFKQLVEDLDRILTLTTNE 201 Score = 25.5 bits (54), Expect = 6.1 Identities = 8/28 (28%), Positives = 17/28 (60%) Query: 178 SFDQLVKALRESESRSLDQLSLDVLRPM 205 +F QLV+ L + + ++ LD+ +P+ Sbjct: 183 TFKQLVEDLDRILTLTTNEEYLDLSQPL 210 >1vma_A Cell division protein FTSY; TM0570, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: CIT; 1.60A {Thermotoga maritima} (A:) Length = 306 Score = 25.6 bits (55), Expect = 5.6 Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Query: 117 PSTDALEENAVMDKPLNEGLSPSSD-LGMQAEESMYSPDLVDKCKGE-EEALVSSDVGDQ 174 + + L +GL + + + + + L D+ + E EE L+ +DVG + Sbjct: 4 DKIHHHHHHMGLFDFLKKGLQKTKETFFGRVVKLLKGKKLDDETREELEELLIQADVGVE 63 Query: 175 VASSFDQLVKALRESESRSLDQLSLDVLRPMLREWLDDNLPGIV 218 + ++ SL ++ L++L + + P ++ Sbjct: 64 TTEYILERLEEKDGDALESLKEIILEILNFDTKLNVPPEPPFVI 107 >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 2wgj_A* 3cth_A* 3ce3_A* 3ctj_A* 3f82_A* 1r0p_A* 1r1w_A 3dkc_A* 3dkf_A* 2g15_A 3dkg_A* 2wd1_A* (A:109-298) Length = 190 Score = 25.7 bits (55), Expect = 5.8 Identities = 8/29 (27%), Positives = 10/29 (34%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQE 29 A PS E+V+ I I E Sbjct: 160 CWHPKAEMRPSFSELVSRISAIFSTFIGE 188 >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 1k2p_A (A:101-283) Length = 183 Score = 25.7 bits (55), Expect = 5.8 Identities = 3/25 (12%), Positives = 12/25 (48%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILEN 25 A P+ + ++++I +++ Sbjct: 157 CWHEKADERPTFKILLSNILDVMDE 181 >3eyg_A Tyrosine-protein kinase; JAK kinase, ATP-binding, nucleotide-binding, phosphoprotein, SH2 domain, transferase; HET: PTR MI1; 1.90A {Homo sapiens} PDB: 3eyh_A* (A:96-290) Length = 195 Score = 25.6 bits (55), Expect = 6.1 Identities = 2/24 (8%), Positives = 10/24 (41%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILE 24 ++ + S + ++ +L+ Sbjct: 172 CWEFQPSNRTSFQNLIEGFEALLK 195 >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleotide-binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* (A:125-313) Length = 189 Score = 25.7 bits (55), Expect = 6.2 Identities = 3/25 (12%), Positives = 12/25 (48%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILEN 25 + + + P+ + + ++LE+ Sbjct: 161 CWRTDPLDRPTFSVLRLQLEKLLES 185 >2b0l_A GTP-sensing transcriptional pleiotropic repressor CODY; DNA-binding, nucleotide-binding, transcription regulation, winged HTH motif.; 2.90A {Bacillus subtilis} (A:) Length = 102 Score = 25.6 bits (56), Expect = 6.5 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 155 LVDKCKGEEEALVSSDVGDQVASSFDQLVKALR--ES----ESRSL 194 + ++ G E LV+S + D+V + +V ALR ES ESRSL Sbjct: 33 IFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSL 78 >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} (A:344-535) Length = 192 Score = 25.4 bits (54), Expect = 6.5 Identities = 3/36 (8%), Positives = 11/36 (30%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSNNV 36 + P+ E + + + + + N+ Sbjct: 157 CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGENL 192 >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} (A:261-452) Length = 192 Score = 25.4 bits (54), Expect = 6.5 Identities = 3/36 (8%), Positives = 11/36 (30%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSNNV 36 + P+ E + + + + + N+ Sbjct: 157 CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGENL 192 >1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} (A:1-68) Length = 68 Score = 25.4 bits (56), Expect = 6.6 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Query: 174 QVASSFDQLVKALRESESRSLDQLSLDVLRPMLREWLDDNLPGIVER 220 + A + ++K E E L +L D LR + + G+VER Sbjct: 14 KAAGTSGLILKRCSEPERYCLARLXADALRGCVPAFH-----GVVER 55 >1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A (A:1-96,A:300-320) Length = 117 Score = 25.5 bits (56), Expect = 6.9 Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 6/52 (11%) Query: 163 EEALVSSDVGDQVASSFDQLVKALRESESRSLDQLSLDVLRPMLREWLDDNL 214 E+ L+ +D+G ++ ++ +R+ R + ++ L E L Sbjct: 41 EDVLIQTDMGMKMV---LKVSNLVRKKTKRDTSF---ENIKDALVESLYQAY 86 >1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} (A:) Length = 70 Score = 25.5 bits (56), Expect = 6.9 Identities = 8/47 (17%), Positives = 18/47 (38%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENNDQEFSTSNNVQTQVPARDEGV 47 P+ EE+ +I+++L + + E T + +V Sbjct: 3 PLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTY 49 >2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens} (A:1-51) Length = 51 Score = 25.4 bits (56), Expect = 7.3 Identities = 11/24 (45%), Positives = 15/24 (62%) Query: 182 LVKALRESESRSLDQLSLDVLRPM 205 ++K + E RSL+QL D LRP Sbjct: 5 ILKRFCQCEQRSLEQLMKDPLRPF 28 >1yvj_A Janus kinase 3, tyrosine-protein kinase JAK3, JAK-3, JAK3, leukocyte janus; tyrosine kinase, SCID, severe combined immunodeficiency, STAT5, STAT6; HET: PTR 4ST; 2.55A {Homo sapiens} (A:94-290) Length = 197 Score = 25.2 bits (54), Expect = 8.1 Identities = 2/26 (7%), Positives = 7/26 (26%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILENN 26 + PS + + + + Sbjct: 171 CWAPSPQDRPSFSALGPQLDMLWSGS 196 >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} (A:127-326) Length = 200 Score = 24.9 bits (53), Expect = 9.2 Identities = 4/24 (16%), Positives = 9/24 (37%) Query: 1 MAQYNAVSEPSMEEIVNSIRRILE 24 N PS ++ + +I + Sbjct: 173 CWNNNVNQRPSFRDLALRVDQIRD 196 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.310 0.128 0.344 Gapped Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,678,169 Number of extensions: 72871 Number of successful extensions: 239 Number of sequences better than 10.0: 1 Number of HSP's gapped: 239 Number of HSP's successfully gapped: 46 Length of query: 236 Length of database: 4,956,049 Length adjustment: 86 Effective length of query: 150 Effective length of database: 2,048,819 Effective search space: 307322850 Effective search space used: 307322850 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 53 (25.0 bits)