HHsearch alignment for GI: 254780933 and conserved domain: COG0495

Probab=96.87  E-value=0.00056  Score=47.48  Aligned_cols=75  Identities=25%  Similarity=0.271  Sum_probs=53.5

Q ss_pred             EEEEECCCCHHCHHHHHHHHHCCHHHH--------------------------HHCCCEEEECCCCCCC--C--CCCCCC
Q ss_conf             999826740101024444441000123--------------------------1115423320248657--3--210000
Q gi|254780933|r  235 IIVSTTRPETMFGDVAIAVHPDDYRYK--------------------------ELIGKYATLPIVGRLI--P--IVSDVY  284 (947)
Q Consensus       235 l~v~TtrPeTl~g~~a~~v~P~d~~y~--------------------------~l~G~~~~~Pl~~~~i--p--i~~~~~  284 (947)
T Consensus       208 ~~l~~~wPE~Vk~mq~nWIg~s~g~~v~f~~~~~~~~~~~~vfttr~dt~~gvt~~~~a~~h~lv~~~~~~~~~~~~a~f  287 (814)
T COG0495         208 DKLATLWPETVKGMQRNWIGPSEGYEVAFVVDGEEEIVSIEVFTTRPDTLFGVTYVVLAPEHPLVGKLVTNPQTPLVAEF  287 (814)
T ss_pred             HHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHH
T ss_conf             65424795669989872707888758998517764410024466357311674899970786678987418651669999


Q ss_pred             CCCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf             3421223203212477855656643
Q gi|254780933|r  285 PDPEFGDGAVKVTPAHDFNDFEIAK  309 (947)
Q Consensus       285 V~~~~GTG~V~~~Pah~~~Dy~~~~  309 (947)
T Consensus       288 v~~~~~~~~~~~~~~~~~k~gv~~g  312 (814)
T COG0495         288 VDECKGTGVVESVPAHAEKDGVFLG  312 (814)
T ss_pred             HHHHCCCCCEEEEECCCCCCCEECC
T ss_conf             9886178715630456877631136