HHsearch alignment for GI: 254780933 and conserved domain: PRK00390
>PRK00390 leuS leucyl-tRNA synthetase; Validated.
Probab=100.00 E-value=0 Score=1288.45 Aligned_cols=720 Identities=27% Similarity=0.421 Sum_probs=568.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 87678978988999999987698644534548998089972844999986543788967799999876708983567788
Q gi|254780933|r 3 IDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPG 82 (947)
Q Consensus 3 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G 82 (947)
T Consensus 1 m~~~Y~~~~iE~kw~~~W~~~~~f~~~~---~~~~k~yvld~~PYpsG~lH~GH~~~~ti~Dii~Rykrm~G~~Vl~p~G 77 (822)
T PRK00390 1 MQMRYNPKEIEKKWQKYWEENKTFKVTE---DSKPKYYVLDMFPYPSGGLHMGHVRNYTIGDVIARYKRMQGYNVLHPMG 77 (822)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCC---CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9887886999999999998569824897---7899807937799989861132556478999999998718996389897
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf 15454089999999976745998777798999999999999999999999998083664279811588679999999999
Q gi|254780933|r 83 TDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFV 162 (947)
Q Consensus 83 ~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~ 162 (947)
T Consensus 78 wD~~GLPaE~~aik-----~~~~------------p~~~t~~nI~~~k~q~k~lG~~~DW~r~~~T~dp~y~~~~qw~F~ 140 (822)
T PRK00390 78 WDAFGLPAENAAIK-----TGTH------------PAEWTYENIANMKKQLKSLGFSYDWSREIATCDPEYYKWTQWLFL 140 (822)
T ss_pred CCCCCCHHHHHHHH-----HCCC------------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 36688689899999-----4998------------899999999999999998395430689877578779999999999
Q ss_pred HHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCC----------CCCCEEEEEE-----EEECCCCCCCCCC--------
Q ss_conf 9998894331332022037767801486865414----------6876699996-----5304530001245--------
Q gi|254780933|r 163 VLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKE----------VDGNLWYVRY-----PLVEGVTYRHPIK-------- 219 (947)
Q Consensus 163 ~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~----------~~~~~~~ik~-----~l~~~~~~~~~~~-------- 219 (947)
T Consensus 141 ~l~ekGliyr~~~~V~Wcp~~~T~LAn~eV~~G~~~r~~~~V~~k~~~qw~~kit~Ya~~Ll~~l~~l~~wP~~vk~mQ~ 220 (822)
T PRK00390 141 KLYEKGLAYRKESPVNWCPVDQTVLANEQVIDGRSWRSGAPVEKKELPQWFLKITDYADELLDDLDELDGWPEKVKTMQR 220 (822)
T ss_pred HHHHCCCEEECCEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHC
T ss_conf 99988997952324200797687765044414764346870466304403552007588875021002466077766530
Q ss_pred ----CCCC--CCCCCCCCCCEEEEEECCCCHHCHHHHHHHHHCCHHHH--------------------------------
Q ss_conf ----5555--44245688716999826740101024444441000123--------------------------------
Q gi|254780933|r 220 ----FDDD--AKPIDWEVRDYIIVSTTRPETMFGDVAIAVHPDDYRYK-------------------------------- 261 (947)
Q Consensus 220 ----~~~~--~~~~~~~~~~~l~v~TtrPeTl~g~~a~~v~P~d~~y~-------------------------------- 261 (947)
T Consensus 221 nWIG~s~g~~v~F~~~~~~~~l~v~TTrP~Tl~G~t~~~v~p~h~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ek~ 300 (822)
T PRK00390 221 NWIGRSEGAEVTFKVKGSDEKLEVFTTRPDTLFGATYLVLAPEHPLAEKLAEQNPAVAAFIEECKNKSDLERTLATKEKT 300 (822)
T ss_pred CCCCCEEEEEEEEECCCCCCEEEEEECCHHHHCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCEEE
T ss_conf 43342000798633169985599996883352286279993797899999844899999999987124366655315010
Q ss_pred -HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf -1115423320248657321000034212232032124778556566430465311101677752136654445554346
Q gi|254780933|r 262 -ELIGKYATLPIVGRLIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILTPEAKIFLSENESFLENIVLS 340 (947)
Q Consensus 262 -~l~G~~~~~Pl~~~~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (947)
T Consensus 301 G~~~G~~~~~P~~~~~iPI~~ad~V~~~~GTG~V~~~PaHd~~D~~~a~k~~Lpi~~Vi~~~~~~~~-----~~~~G~l- 374 (822)
T PRK00390 301 GVFTGLYAIHPLTGEKIPVWIANYVLMDYGTGAVMAVPAHDQRDFEFAKKYGLPIKQVIGGDVSEEA-----YTEDGVL- 374 (822)
T ss_pred CEECCCEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCC-----CCCCEEE-
T ss_conf 1005858977788965569962525245787726756878878999999829982476378876654-----5577148-
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCC
Q ss_conf 55465553100151233448889988887643332102232223566655324443122212145420233343200244
Q gi|254780933|r 341 DEARNIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCL 420 (947)
Q Consensus 341 ~~~~~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i 420 (947)
T Consensus 375 ----ins~~~~Gl~~~eA~~~ii~~L~~~g~g~~--------------------------------------------~i 406 (822)
T PRK00390 375 ----INSGELDGLDSEEAKEAIIAWLEEKGLGKR--------------------------------------------KV 406 (822)
T ss_pred ----ECCHHCCCCCHHHHHHHHHHHHHHCCCCCC--------------------------------------------CC
T ss_conf ----763421786468899999999997799866--------------------------------------------34
Q ss_pred CEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCC---CCCCCCCCCC
Q ss_conf 1121443113567641011123212354563102698389988765762344542034556787765---5541002568
Q gi|254780933|r 421 SFIPQSWDKSYYEWLENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDM---TVKVRKMIKD 497 (947)
Q Consensus 421 ~~~P~~~~~~~~~wl~~~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 497 (947)
T Consensus 407 ~y--------------rLRDW~iSRQRyWG~PIPi~~c~~~~~v~v~e~~Lpv~LPe~~~~~~~g~~PL~~~~~w~~~~c 472 (822)
T PRK00390 407 NY--------------RLRDWGISRQRYWGEPIPIIHCEDCGVVPVPEDDLPVVLPEDVVPDGTGESPLAKHPEWVNVTC 472 (822)
T ss_pred CE--------------ECCCCEEECCCCCCCCEEEEEECCCCEEEEEHHHCCCCCHHHEECCCCCCCHHHHCCCCEEEEC
T ss_conf 10--------------1266322112025784038995789778710787553460013006889994684700175214
Q ss_pred CCCCCCEEECCCEECCEEECCCCCCCEECHHHH------HHCCCCCCCCCCCCCCCC--CC-----CCHHHHHHHHHHHC
Q ss_conf 888310188241002202044233320101111------000123455530124554--32-----10135677766530
Q gi|254780933|r 498 GNISDLLKRDEDVLDTWFSSALWPFASLGWPEQ------TAELKTYYPTSVLVTGFD--IL-----FFWVARMMMMGLYF 564 (947)
Q Consensus 498 ~~~~~~~~r~~DvlDtWfdSg~~p~~~l~~p~~------~~e~~~~~P~d~~~~G~D--i~-----r~W~~~~l~~~~~l 564 (947)
T Consensus 473 ~~~g~~~~RetDt~DtW~dS-sWY~~ry~~p~~~~~~~d~~~~~yw~PvD~YigG~EHailHLlYsRF~~~~l~dlg--- 548 (822)
T PRK00390 473 PKCGKPARRETDTMDTFVGS-SWYYLRYTDPHNDEAMFDKEAANYWLPVDQYIGGIEHAVLHLLYARFFHKVLRDLG--- 548 (822)
T ss_pred CCCCCCCEECCCCCCEEECC-CCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC---
T ss_conf 77787214535310201135-44000015776444667977886028961401644566778888889999998716---
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCH------------------------HHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 121133786852000014431000------------------------12255431245653023320254034445431
Q gi|254780933|r 565 MKDAEGKGIEPFHIVYMHALVRDK------------------------NGQKMSKSKGNVVDPIDVIDQYGADALRFYFS 620 (947)
Q Consensus 565 ~~~~~~~~~~Pfk~v~~hG~vld~------------------------~G~KMSKS~GNvidp~e~i~~yGaDalR~~l~ 620 (947)
T Consensus 549 ----~~~~~ePF~~l~~qGmVl~~~~~~~~~~~~~~~~v~~~~~~~~~~g~KMSKSkGNvv~P~~ii~~yGADalRl~~l 624 (822)
T PRK00390 549 ----LVSSDEPFKKLLTQGMVLGETYYDERGNWVSPADVEVERDEKRIGGIKMSKSKGNVVDPDDIIDKYGADTARLFEM 624 (822)
T ss_pred ----CCCCCCCHHHHEECCEEECCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf ----7556777577504456842544445677666011242045567677616765789689899987548079999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 23355677543411011100001234443333202444577676774333155567799999999888998753100102
Q gi|254780933|r 621 IMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDV 700 (947)
Q Consensus 621 ~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a 700 (947)
T Consensus 625 ~~ap~~~d~~ws~~~i~g~~rfl~rlw~~~~~------------~~~~~~~~~d~~l~~~l~~~I~~vt~~~e~~~fn~a 692 (822)
T PRK00390 625 FAGPPEKDLEWSDSGVEGAYRFLQRVWRLVYD------------EGAVAALEADKELRRALHKTIKKVTEDIERLRFNTA 692 (822)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 60885666120487899999999999997304------------445568723199999999999999999976677699
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC
Q ss_conf 45777653100136889864765305671444321000145676403456774489999999743566676756536635
Q gi|254780933|r 701 SAVLYRFVWDELCDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHA 780 (947)
Q Consensus 701 ~~~i~~F~~~~~~~~Yie~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~ 780 (947)
T Consensus 693 i~~l~~f~-N~l-------~k-----------~~~~~~l~~~l~~l~rlLaPf~PhiaEElW~~Lg~------~~sV~~~ 747 (822)
T PRK00390 693 IAALMELV-NAL-------SK-----------APDRAVLREALEILVRLLAPFAPHIAEELWQELGH------EGSIANA 747 (822)
T ss_pred HHHHHHHH-HHH-------HH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCEEEC
T ss_conf 99999999-999-------87-----------25189999999999999987889999999997799------9856458
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 78787747789899999999999999988898089977746599964998999999998999998324615871148887
Q gi|254780933|r 781 QWPSLIIDDSESIEEVNWIIDLISKVRSIRTEMNVPLKAVVPLVFANIDAHVRKRLECHKCIIDRLSSGNIIFADCPPDR 860 (947)
Q Consensus 781 ~wP~~~~~d~~~~~~~~~~~~ii~~iR~~R~~~~i~~k~~i~i~~~~~~~~~~~~l~~~~~ii~~L~~~~i~~~~~~~~~ 860 (947)
T Consensus 748 ~WP~~---de~~l~~-----~----~~~~~vqiNGK~r~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~k~i~k~I~vp~k 815 (822)
T PRK00390 748 PWPEV---DEAALVE-----D----EVTIVVQVNGKVRGKIEVAADASKEEVEALALADEKVQKFLEGKTIKKVIVVPGK 815 (822)
T ss_pred CCCCC---CHHHHHH-----C----CCEEEEEECCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCC
T ss_conf 99967---8788821-----6----7789999748087799808999999999998649779998589983399998997
Q ss_pred EEEEEEC
Q ss_conf 3799928
Q gi|254780933|r 861 SIQIILD 867 (947)
Q Consensus 861 ~~~~v~~ 867 (947)
T Consensus 816 iiN~Vvk 822 (822)
T PRK00390 816 LVNIVVK 822 (822)
T ss_pred EEEEEEC
T ss_conf 5899969