HHsearch alignment for GI: 254780933 and conserved domain: PRK05347

>PRK05347 glutaminyl-tRNA synthetase; Provisional.
Probab=97.63  E-value=0.00027  Score=49.83  Aligned_cols=95  Identities=27%  Similarity=0.360  Sum_probs=59.9

Q ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH
Q ss_conf             08997284499998654378896779999987670898356778815454089999999976745998777798999999
Q gi|254780933|r   38 VFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEK  117 (947)
Q Consensus        38 ~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~  117 (947)
T Consensus        29 kVvtRF-pPePnG~LHiGHaka~~lN~~~a~~y--~G~~~LR---fDDTN-P~------------~---e----------   76 (556)
T PRK05347         29 KVHTRF-PPEPNGYLHIGHAKSICLNFGLAQDY--GGKCNLR---FDDTN-PE------------K---E----------   76 (556)
T ss_pred             EEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEE---ECCCC-CC------------C---C----------
T ss_conf             399804-98999876188889998669999970--9989998---35899-87------------4---5----------


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEECCC-CEECCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             999999999999999998083664279-8115886799999999999998894331
Q gi|254780933|r  118 VWEWKKESGGSILSQLKRLGASCDWSR-ERFTMDEGMSNAVRNAFVVLYKDGLIYR  172 (947)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~lG~~~Dw~r-~y~T~d~~y~~~v~~~F~~L~~~gliy~  172 (947)
T Consensus        77 ----~~e~~~~I~~d~~wLg~~--~~~~i~~~Sd--~f~~~y~~a~~LI~~g~AYv  124 (556)
T PRK05347         77 ----DQEYVDSIKEDVRWLGFD--WGGELRYASD--YFDQLYEYAVELIKKGKAYV  124 (556)
T ss_pred             ----CHHHHHHHHHHHHHCCCC--CCCEEEEEHH--HHHHHHHHHHHHHHCCCCEE
T ss_conf             ----489999999999874998--8982788134--29999999999986488135