HHsearch alignment for GI: 254780933 and conserved domain: PRK05729
>PRK05729 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=2009.01 Aligned_cols=870 Identities=51% Similarity=0.943 Sum_probs=818.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 98876789789889999999876986445345489980899728449999865437889677999998767089835677
Q gi|254780933|r 1 MMIDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQ 80 (947)
Q Consensus 1 ~~~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~ 80 (947)
T Consensus 1 ~e~~~~Y~~~~iE~k~~~~W~~~~~f~~~--~~~~~~~f~~~~pPP~~~G~lHiGHa~~~~i~D~i~Ry~rm~G~~V~~~ 78 (877)
T PRK05729 1 KELPKTYDPKEVEAKWYQKWEEKGYFKPD--GDKSKKPFSIVIPPPNVTGSLHMGHALNNTLQDILIRYKRMQGYNTLWL 78 (877)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCC--CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 98857899399999999999857997378--7789997799728898879861216674889999999987279966888
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHH
Q ss_conf 88154540899999999767459987777989999999999999999999999980836642798115886799999999
Q gi|254780933|r 81 PGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNA 160 (947)
Q Consensus 81 ~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~ 160 (947)
T Consensus 79 pG~D~~Gl~~e~~vek~l~~-~g~~~~~~~re~f~~~~~~w~~~~~~~i~~q~~rlG~s~Dw~~~~~T~d~~~~~~v~~~ 157 (877)
T PRK05729 79 PGTDHAGIATQMVVERQLAA-EGKTRHDLGREKFLEKVWEWKEESGGTITNQLRRLGASVDWSRERFTMDEGLSKAVREV 157 (877)
T ss_pred CCCCCCCCHHHHHHHHHHHH-CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHH
T ss_conf 98688860568999999987-49983544899999999999999999999999982860335898455898899999999
Q ss_pred HHHHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 99999889433133202203776780148686541468766999965304530001245555544245688716999826
Q gi|254780933|r 161 FVVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTT 240 (947)
Q Consensus 161 F~~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Tt 240 (947)
T Consensus 158 F~~L~~kGliyr~~~~V~wcp~~~Tals~~EV~~~~~~~~~~~ikf~l~~~--------------------~~~l~i~TT 217 (877)
T PRK05729 158 FVRLYEKGLIYRGKRLVNWDPKLQTALSDLEVEYKEVKGKLWHIRYPLADG--------------------SDYLVVATT 217 (877)
T ss_pred HHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC--------------------CCEEEEECC
T ss_conf 999998899784131236688778843567873245667338984132478--------------------874765016
Q ss_pred CCCHHCHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEC
Q ss_conf 74010102444444100012311154233202486573210000342122320321247785565664304653111016
Q gi|254780933|r 241 RPETMFGDVAIAVHPDDYRYKELIGKYATLPIVGRLIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILT 320 (947)
Q Consensus 241 rPeTl~g~~a~~v~P~d~~y~~l~G~~~~~Pl~~~~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~ 320 (947)
T Consensus 218 rPeTl~~~~avav~P~dery~~l~Gk~~~~P~~~~~ipii~d~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~L~~~~~id 297 (877)
T PRK05729 218 RPETMLGDTAVAVNPEDERYKHLIGKKVILPLVGREIPIIADEYVDPEFGTGAVKITPAHDFNDFEVGKRHNLPMINIMD 297 (877)
T ss_pred CCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf 85234464578846887488985598898058897532871575267778461797168997899988764887434656
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH
Q ss_conf 77752136654445554346554655531001512334488899888876433321022322235666553244431222
Q gi|254780933|r 321 PEAKIFLSENESFLENIVLSDEARNIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQW 400 (947)
Q Consensus 321 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QW 400 (947)
T Consensus 298 ~~G~~~~------------------~~~~~~G~~~~~ar~~Ii~~L~~~g~l~~~~~~~h~~p~~~R~~~pi~~~~~~QW 359 (877)
T PRK05729 298 EDGTINE------------------NAGEYQGLDRFEARKAIVADLEELGLLVKIEPHKHSVGHSDRSGVVIEPYLSDQW 359 (877)
T ss_pred CCCCCCC------------------CCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
T ss_conf 6764045------------------7410299708898899999999779977432135678754677856997413010
Q ss_pred EECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCC
Q ss_conf 12145420233343200244112144311356764101112321235456310269838998876576234454203455
Q gi|254780933|r 401 YLDAKVLAESAIRSAKNGCLSFIPQSWDKSYYEWLENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYY 480 (947)
Q Consensus 401 fi~~~~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~ 480 (947)
T Consensus 360 Fi~~~~l~~~~l~~~~~~~i~~~P~~~~~~~~~wl~n~~DWcISRqr~WG~piPvw~~~~~~~~v~~~~~~~-------- 431 (877)
T PRK05729 360 FVKMKPLAKPALEAVEDGKIKFVPKRWENTYFHWMENIQDWCISRQLWWGHRIPAWYDEDGEVYVGRTEPEA-------- 431 (877)
T ss_pred EECCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHH--------
T ss_conf 000335799999986058831257788849999860565551135544688425899189848941675664--------
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCCEEECCCEECCEEECCCCCCCEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 67877655541002568888-31018824100220204423332010111100012345553012455432101356777
Q gi|254780933|r 481 LSQDNDMTVKVRKMIKDGNI-SDLLKRDEDVLDTWFSSALWPFASLGWPEQTAELKTYYPTSVLVTGFDILFFWVARMMM 559 (947)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~-~~~~~r~~DvlDtWfdSg~~p~~~l~~p~~~~e~~~~~P~d~~~~G~Di~r~W~~~~l~ 559 (947)
T Consensus 432 ----------------~~~~~~~~~~~d~DVlDtWFsSgl~p~s~lg~p~~~~~~~~~~P~d~~~~G~Dii~fWv~rm~~ 495 (877)
T PRK05729 432 ----------------RAKAGSENLTQDEDVLDTWFSSALWPFSTLGWPDKTPDLKRFYPTSVLVTGFDIIFFWVARMIM 495 (877)
T ss_pred ----------------HHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEEEC
T ss_conf ----------------4323876525565322334431666644166865205442478875452065521134444431
Q ss_pred HHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 66530121133786852000014431000122554312456530233202540344454312335567754341101110
Q gi|254780933|r 560 MGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERIAGY 639 (947)
Q Consensus 560 ~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i~~~ 639 (947)
T Consensus 496 ~~~~~~------~~~Pfk~v~~hG~v~D~~G~KMSKS~GNvidP~~vi~~yGaDalR~~l~~~~~~g~di~~~~~~v~~~ 569 (877)
T PRK05729 496 MGLHFT------GQVPFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDLIDKYGADALRFTLAALASPGRDIRFDEERVEGY 569 (877)
T ss_pred CEEEEC------CCCCCHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 032011------23761102004437889887787878898998999987191999999997077676600068999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
Q ss_conf 000123444333320244457767-6774333155567799999999888998753100102457776531001368898
Q gi|254780933|r 640 RNFITKFWNAIRFSKMKNARHSVS-FVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVE 718 (947)
Q Consensus 640 r~f~nKLwNa~rf~~~~~~~~~~~-~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie 718 (947)
T Consensus 570 r~f~nKlwN~~rf~~~~~~~~~~~~~~~~~~~~~~D~WIlskL~~~i~~v~~~~~~y~f~~a~~~ly~F~w~d~cdwYlE 649 (877)
T PRK05729 570 RNFANKLWNASRFVLMNLEGQDPGFLPDEAELSLADRWILSRLNRTVAEVTEALDKYRFDEAAQALYEFIWNEFCDWYLE 649 (877)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999972465664445662106787999999999999999875000209999999999846755789999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC--CCCHHHHHHH
Q ss_conf 64765305671444321000145676403456774489999999743566676756536635787877--4778989999
Q gi|254780933|r 719 FIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLI--IDDSESIEEV 796 (947)
Q Consensus 719 ~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~--~~d~~~~~~~ 796 (947)
T Consensus 650 ~~K~rl~~~~~~~~~~~~~~L~~vL~~~L~lLhPfmPFitEElwq~L~~-----~~~si~~~~wP~~~~~~~d~~~e~~~ 724 (877)
T PRK05729 650 LAKPVLNGGDEAAKRGTRATLAYVLEEILRLLHPFMPFITEELWQKLAP-----EGESIMLAPWPEADEALIDEAAEADF 724 (877)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-----CCCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 9799770887788999999999999999998560135759999985778-----89746863799997100798999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEE-EE--CCCCCCEEEEEECCEEEEE
Q ss_conf 99999999999888980899777465999649989999999989999983246158-71--1488873799928919999
Q gi|254780933|r 797 NWIIDLISKVRSIRTEMNVPLKAVVPLVFANIDAHVRKRLECHKCIIDRLSSGNII-FA--DCPPDRSIQIILDGMVLFL 873 (947)
Q Consensus 797 ~~~~~ii~~iR~~R~~~~i~~k~~i~i~~~~~~~~~~~~l~~~~~ii~~L~~~~i~-~~--~~~~~~~~~~v~~~~~~~i 873 (947)
T Consensus 725 ~~~~eiI~~iRs~R~e~nI~~k~~l~v~i~~~~~~~~~~l~~~~~~I~~La~~~~i~~~~~~~~~~~~~~~v~~~~~i~i 804 (877)
T PRK05729 725 EWLKELITAIRNIRAEMNIPPSKKLPLLLKGADAEDRARLERNEAYIKRLARLESIEILAEGEAPEGAATAVVGGAELFL 804 (877)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCEEEEE
T ss_conf 99999999999999972989898205999729889999999989999998587706865777789886599958879999
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8244549999999889999999999999986607923678588899999999999999999999999999861
Q gi|254780933|r 874 AIGDFVDFVKERSRLKKSLEKVLDELSSIKKKLENNQFVEKAPPSILQAEKERFSKVEKKRISLENSLERIRM 946 (947)
Q Consensus 874 ~l~~~iD~~~e~~rl~K~l~~l~~~i~~~~~kL~N~~Fv~kAP~~vv~~er~kl~~~~~~i~~l~~~l~~l~~ 946 (947)
T Consensus 805 ~l~~~ID~~~E~~RL~K~l~kl~~ei~~i~~kLsN~~Fi~kAP~~VV~~ek~Kl~~~~~~i~~i~~~L~~Lk~ 877 (877)
T PRK05729 805 PLEGLIDVEAELARLEKELAKLEKEIERVEKKLSNEGFVAKAPEEVVEKEREKLAEYQEKLEKLKERLARLKA 877 (877)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8888758899999999999999999999997767856667389999999999999999999999999997259