HHsearch alignment for GI: 254780933 and conserved domain: PRK06039
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1802.87 Aligned_cols=842 Identities=26% Similarity=0.429 Sum_probs=742.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 87678978988999999987698644534548998089972844999986543788967799999876708983567788
Q gi|254780933|r 3 IDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPG 82 (947)
Q Consensus 3 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G 82 (947)
T Consensus 1 ~~~~~~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~dgPPy~nG~lHiGH~~~~tikDii~Ry~rm~G~~V~~~~G 80 (1042)
T PRK06039 1 VPSKPDFPAVEEEVLKFWKENDIFEKSIENREGGPEFVFYDGPPFANGLPHYGHLLTRTIKDVVPRYKTMKGYKVERRAG 80 (1042)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999988988999999986899246300069999789967899878872143668789999999998738996689897
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf 15454089999999976745998777798999999999999999999999998083664279811588679999999999
Q gi|254780933|r 83 TDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFV 162 (947)
Q Consensus 83 ~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~ 162 (947)
T Consensus 81 wD~hGLPiE~~vek~lgi~~k~~i~~~gi~~F~~~cr~~~~~~~~~~~~~~~rlG~~~Dw~~~y~T~d~~y~e~v~~~F~ 160 (1042)
T PRK06039 81 WDTHGLPVELEVEKELGISGKKDIEKYGIEKFNEECRESVLRYTDEWEEYTERLGRWVDFDNPYKTMDNSYMESVWWALK 160 (1042)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHH
T ss_conf 48677899999999847667642655289999999999999999999999998182052689827689889999999999
Q ss_pred HHHHCCCEEECCCEEEECCCCCCCCCHHHH--HCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 999889433133202203776780148686--541468766999965304530001245555544245688716999826
Q gi|254780933|r 163 VLYKDGLIYRDKRIVNWDPSLKTSVSDLEV--IQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTT 240 (947)
Q Consensus 163 ~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev--~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Tt 240 (947)
T Consensus 161 ~L~ekGliYrg~~~V~wcp~~~T~Lad~Ev~~~Y~~~~~~s~~vkF~l~~~-------------------~~~~l~iwTT 221 (1042)
T PRK06039 161 QLYDKGLLYEGYRVVPYCPRCETPLSNHEVRQGYKEVKDPSVYVKFKLKGE-------------------ENEYLLAWTT 221 (1042)
T ss_pred HHHHCCCEEECCCEECCCCCCCCCCHHHHHHCCCEEEECCEEEEEEEEECC-------------------CCCEEEEECC
T ss_conf 999879989627132548988988118673057444144649999997527-------------------9847998658
Q ss_pred CCCHHCHHHHHHHHHCC-----------HH---------------------------HHHHCCCEEEECCCC-------C
Q ss_conf 74010102444444100-----------01---------------------------231115423320248-------6
Q gi|254780933|r 241 RPETMFGDVAIAVHPDD-----------YR---------------------------YKELIGKYATLPIVG-------R 275 (947)
Q Consensus 241 rPeTl~g~~a~~v~P~d-----------~~---------------------------y~~l~G~~~~~Pl~~-------~ 275 (947)
T Consensus 222 rPwTl~~n~avaV~Pd~~Y~~v~~~~~~e~~i~a~~~~~~~~~~~~~~~~~v~~~~~G~~L~G~~y~~p~~~~~~~~~~~ 301 (1042)
T PRK06039 222 TPWTLPSNLALAVGPDIDYVKVRDKGGGEVYILAEALLEKVLKKEGGEEYEVLETFKGEELEGLRYEPPFPYFVPEDEEN 301 (1042)
T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEECHHHCCCEEECCCCCCCCCCCCC
T ss_conf 87511113599986876369998448975999808889999855167540788775124307888778864323667787
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 57321000034212232032124778556566430465311101677752136654445554346554655531001512
Q gi|254780933|r 276 LIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILTPEAKIFLSENESFLENIVLSDEARNIFSEFEGLDC 355 (947)
Q Consensus 276 ~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 355 (947)
T Consensus 302 ~~~Vi~~d~V~~~~GTG~Vh~aPahg~~D~~~~~~~~l~~~~~vd~~G~~~~------------------~~~~~~G~~v 363 (1042)
T PRK06039 302 AFRVVAADFVTTEDGTGIVHIAPAFGEDDFEVGKKYGLPVVCPVDDNGRFTE------------------EVPDYAGKFV 363 (1042)
T ss_pred CEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC------------------CCCCCCCCEE
T ss_conf 4279954720578897428967889889999999839986663177553346------------------4435179365
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCCCEECCCCCH-HHHHH
Q ss_conf 33448889988887643332102232223566655324443122212145420233343200244112144311-35676
Q gi|254780933|r 356 FAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCLSFIPQSWDK-SYYEW 434 (947)
Q Consensus 356 ~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i~~~P~~~~~-~~~~w 434 (947)
T Consensus 364 ~da~~~Ii~~L~~~g~l~~~~~~~Hsyp~cwR~~~pli~~~~~QWFi~~~~~k~~~l~~~--~~i~w~P~~~~~~rf~~w 441 (1042)
T PRK06039 364 KDADKEIIRDLKERGLLFKAETYEHSYPHCWRCDTPLIYRAVESWFIRVTKIKDRMLELN--QKINWYPEHIKDGRFGKW 441 (1042)
T ss_pred ECCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH--HCCEEECCCCCCCHHHHH
T ss_conf 302099999998667522466335578742577981486332627765576799999986--021473452320069999
Q ss_pred HHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCE
Q ss_conf 41011123212354563102698389988765762344542034556787765554100256888831018824100220
Q gi|254780933|r 435 LENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTW 514 (947)
Q Consensus 435 l~~~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtW 514 (947)
T Consensus 442 l~n~~DW~ISRQR~WG~PIPvw~~~~~~~~~v~~s~~el~~~~~~~~~~dlhrp~iD~v~~~~~~~~~~~~r~~DvlD~W 521 (1042)
T PRK06039 442 LENARDWAISRNRYWGTPLPIWRCEDCGRIDVIGSIEELEEDFGVPKPIDLHRPYIDEVTLPCPDCGTGMRRVPDVLDVW 521 (1042)
T ss_pred HHHCCCHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEEEE
T ss_conf 86363311000234577540699679996670286999987608888301024545505655899862103056421237
Q ss_pred EECCCCCCCEECHHHHH-HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHH
Q ss_conf 20442333201011110-00123455530124554321013567776653012113378685200001443100012255
Q gi|254780933|r 515 FSSALWPFASLGWPEQT-AELKTYYPTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKM 593 (947)
Q Consensus 515 fdSg~~p~~~l~~p~~~-~e~~~~~P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KM 593 (947)
T Consensus 522 fdSg~~p~a~~~~p~~~~~~f~~~~PaD~i~eg~Dq~RgWF~sl~~~s~~~~------~~~Pfk~v~~~G~Vld~~G~KM 595 (1042)
T PRK06039 522 FDSGSMPYAQLHYPFENKELFEEHFPADFIVEGIDQTRGWFYTLLALSTALF------DRPPYKNVIVHGHVLDEDGQKM 595 (1042)
T ss_pred EECCCCCEEEECCCCCCHHHHHCCCCCEEEEECCCHHEEEEEEEEEEEEEEC------CCCCCCEEEEEEEEECCCCEEC
T ss_conf 6358744069778643666662158644445232221014360003212234------8420025899503873686480
Q ss_pred HHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCC--CCCCCCC--CCCCC
Q ss_conf 4312456530233202540344454312335567754341101-11000012344433332024--4457767--67743
Q gi|254780933|r 594 SKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERI-AGYRNFITKFWNAIRFSKMK--NARHSVS--FVPQD 668 (947)
Q Consensus 594 SKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i-~~~r~f~nKLwNa~rf~~~~--~~~~~~~--~~~~~ 668 (947)
T Consensus 596 SKS~GNvidP~~vi~~yGADalRl~l~~~~~~~~d~~f~~~~v~e~~r~~~~~lwN~~rF~~~y~~ld~f~~~~~~~~~~ 675 (1042)
T PRK06039 596 SKSLGNYVDPFEVFDKYGADALRWYLLSSSVPWEDLRFSEDGIREVVRKFLLPLWNVYSFFALYANLDGFDPNEAEEALD 675 (1042)
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 33678868979998860827999999966775556157799999999999999999999998742102799543555632
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHC
Q ss_conf 33155567799999999888998753100102457776531001368898647653056-71444321000145676403
Q gi|254780933|r 669 VKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFIKSILNQK-DSELVSETLSCFSYVLYNVC 747 (947)
Q Consensus 669 ~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie~~K~~l~~~-~~~~~~~~~~~l~~vl~~~l 747 (947)
T Consensus 676 ~~~~~DrWils~l~~~i~~v~~~~~~y~~~~a~~~l~~Fi-~dLs~wYi~~~r~R~~~~~~~~~k~~A~~tL~~vL~~l~ 754 (1042)
T PRK06039 676 SRNELDRWILSRLNSLVKEVTEALDNYDITKAARAIRDFV-DDLSNWYIRRSRRRFWKEEDDPDKLAAYNTLYTVLETLS 754 (1042)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 1668789999999999999999997245999999999999-887799999977876036897899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE-EE
Q ss_conf 456774489999999743566676756536635787877--477898999999999999999888980899777465-99
Q gi|254780933|r 748 KLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLI--IDDSESIEEVNWIIDLISKVRSIRTEMNVPLKAVVP-LV 824 (947)
Q Consensus 748 ~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~--~~d~~~~~~~~~~~~ii~~iR~~R~~~~i~~k~~i~-i~ 824 (947)
T Consensus 755 ~llAP~~PFitEeiyq~L~~~---~~~eSVHl~~~P~~~~~~id~~le~~m~~~r~iv~~~r~~R~~~~ikvRqPL~~~~ 831 (1042)
T PRK06039 755 RLMAPFTPFIAEEIYQNLKGE---TGPESVHLADWPEVDESLIDPELEAAMDLVREIVSLGRSARKKANIKVRQPLSRIT 831 (1042)
T ss_pred HHHCCCHHHHHHHHHHHCCCC---CCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 996501367699999844558---99951798146776612148999999999999999999999875997666266479
Q ss_pred EECCCHHHHHHHHHHHHHH-HHHCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9649989999999989999-983246158711488873799928919999824454999999988999999999999998
Q gi|254780933|r 825 FANIDAHVRKRLECHKCII-DRLSSGNIIFADCPPDRSIQIILDGMVLFLAIGDFVDFVKERSRLKKSLEKVLDELSSIK 903 (947)
Q Consensus 825 ~~~~~~~~~~~l~~~~~ii-~~L~~~~i~~~~~~~~~~~~~v~~~~~~~i~l~~~iD~~~e~~rl~K~l~~l~~~i~~~~ 903 (947)
T Consensus 832 i~~~~~~~~~~~~~~~~~I~~ElNVk~v~~~~~~~~~------------~~~~~kpn~~~LG~r~gk~~~~v~~~i~~~~ 899 (1042)
T PRK06039 832 VAVKDEEVLEALEEYEDIIKDELNVKEVEFVDDEEDY------------VSYELKPNFKVLGPRLGKDVKAVIKAIKSGD 899 (1042)
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCE------------EEEEEEECHHHHCHHHHHHHHHHHHHHHHCC
T ss_conf 9948989999999999999985283389997076612------------7999997768868776488999999998089
Q ss_pred HH
Q ss_conf 66
Q gi|254780933|r 904 KK 905 (947)
Q Consensus 904 ~k 905 (947)
T Consensus 900 ~~ 901 (1042)
T PRK06039 900 WE 901 (1042)
T ss_pred HH
T ss_conf 99