HHsearch alignment for GI: 254780933 and conserved domain: PRK06039

>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=1802.87  Aligned_cols=842  Identities=26%  Similarity=0.429  Sum_probs=742.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             87678978988999999987698644534548998089972844999986543788967799999876708983567788
Q gi|254780933|r    3 IDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPG   82 (947)
Q Consensus         3 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G   82 (947)
T Consensus         1 ~~~~~~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~dgPPy~nG~lHiGH~~~~tikDii~Ry~rm~G~~V~~~~G   80 (1042)
T PRK06039          1 VPSKPDFPAVEEEVLKFWKENDIFEKSIENREGGPEFVFYDGPPFANGLPHYGHLLTRTIKDVVPRYKTMKGYKVERRAG   80 (1042)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             98999988988999999986899246300069999789967899878872143668789999999998738996689897


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf             15454089999999976745998777798999999999999999999999998083664279811588679999999999
Q gi|254780933|r   83 TDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFV  162 (947)
Q Consensus        83 ~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~  162 (947)
T Consensus        81 wD~hGLPiE~~vek~lgi~~k~~i~~~gi~~F~~~cr~~~~~~~~~~~~~~~rlG~~~Dw~~~y~T~d~~y~e~v~~~F~  160 (1042)
T PRK06039         81 WDTHGLPVELEVEKELGISGKKDIEKYGIEKFNEECRESVLRYTDEWEEYTERLGRWVDFDNPYKTMDNSYMESVWWALK  160 (1042)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHH
T ss_conf             48677899999999847667642655289999999999999999999999998182052689827689889999999999


Q ss_pred             HHHHCCCEEECCCEEEECCCCCCCCCHHHH--HCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             999889433133202203776780148686--541468766999965304530001245555544245688716999826
Q gi|254780933|r  163 VLYKDGLIYRDKRIVNWDPSLKTSVSDLEV--IQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTT  240 (947)
Q Consensus       163 ~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev--~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Tt  240 (947)
T Consensus       161 ~L~ekGliYrg~~~V~wcp~~~T~Lad~Ev~~~Y~~~~~~s~~vkF~l~~~-------------------~~~~l~iwTT  221 (1042)
T PRK06039        161 QLYDKGLLYEGYRVVPYCPRCETPLSNHEVRQGYKEVKDPSVYVKFKLKGE-------------------ENEYLLAWTT  221 (1042)
T ss_pred             HHHHCCCEEECCCEECCCCCCCCCCHHHHHHCCCEEEECCEEEEEEEEECC-------------------CCCEEEEECC
T ss_conf             999879989627132548988988118673057444144649999997527-------------------9847998658


Q ss_pred             CCCHHCHHHHHHHHHCC-----------HH---------------------------HHHHCCCEEEECCCC-------C
Q ss_conf             74010102444444100-----------01---------------------------231115423320248-------6
Q gi|254780933|r  241 RPETMFGDVAIAVHPDD-----------YR---------------------------YKELIGKYATLPIVG-------R  275 (947)
Q Consensus       241 rPeTl~g~~a~~v~P~d-----------~~---------------------------y~~l~G~~~~~Pl~~-------~  275 (947)
T Consensus       222 rPwTl~~n~avaV~Pd~~Y~~v~~~~~~e~~i~a~~~~~~~~~~~~~~~~~v~~~~~G~~L~G~~y~~p~~~~~~~~~~~  301 (1042)
T PRK06039        222 TPWTLPSNLALAVGPDIDYVKVRDKGGGEVYILAEALLEKVLKKEGGEEYEVLETFKGEELEGLRYEPPFPYFVPEDEEN  301 (1042)
T ss_pred             CCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEECHHHCCCEEECCCCCCCCCCCCC
T ss_conf             87511113599986876369998448975999808889999855167540788775124307888778864323667787


Q ss_pred             CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             57321000034212232032124778556566430465311101677752136654445554346554655531001512
Q gi|254780933|r  276 LIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILTPEAKIFLSENESFLENIVLSDEARNIFSEFEGLDC  355 (947)
Q Consensus       276 ~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v  355 (947)
T Consensus       302 ~~~Vi~~d~V~~~~GTG~Vh~aPahg~~D~~~~~~~~l~~~~~vd~~G~~~~------------------~~~~~~G~~v  363 (1042)
T PRK06039        302 AFRVVAADFVTTEDGTGIVHIAPAFGEDDFEVGKKYGLPVVCPVDDNGRFTE------------------EVPDYAGKFV  363 (1042)
T ss_pred             CEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC------------------CCCCCCCCEE
T ss_conf             4279954720578897428967889889999999839986663177553346------------------4435179365


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCCCEECCCCCH-HHHHH
Q ss_conf             33448889988887643332102232223566655324443122212145420233343200244112144311-35676
Q gi|254780933|r  356 FAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCLSFIPQSWDK-SYYEW  434 (947)
Q Consensus       356 ~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i~~~P~~~~~-~~~~w  434 (947)
T Consensus       364 ~da~~~Ii~~L~~~g~l~~~~~~~Hsyp~cwR~~~pli~~~~~QWFi~~~~~k~~~l~~~--~~i~w~P~~~~~~rf~~w  441 (1042)
T PRK06039        364 KDADKEIIRDLKERGLLFKAETYEHSYPHCWRCDTPLIYRAVESWFIRVTKIKDRMLELN--QKINWYPEHIKDGRFGKW  441 (1042)
T ss_pred             ECCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH--HCCEEECCCCCCCHHHHH
T ss_conf             302099999998667522466335578742577981486332627765576799999986--021473452320069999


Q ss_pred             HHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCE
Q ss_conf             41011123212354563102698389988765762344542034556787765554100256888831018824100220
Q gi|254780933|r  435 LENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTW  514 (947)
Q Consensus       435 l~~~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtW  514 (947)
T Consensus       442 l~n~~DW~ISRQR~WG~PIPvw~~~~~~~~~v~~s~~el~~~~~~~~~~dlhrp~iD~v~~~~~~~~~~~~r~~DvlD~W  521 (1042)
T PRK06039        442 LENARDWAISRNRYWGTPLPIWRCEDCGRIDVIGSIEELEEDFGVPKPIDLHRPYIDEVTLPCPDCGTGMRRVPDVLDVW  521 (1042)
T ss_pred             HHHCCCHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEEEE
T ss_conf             86363311000234577540699679996670286999987608888301024545505655899862103056421237


Q ss_pred             EECCCCCCCEECHHHHH-HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHH
Q ss_conf             20442333201011110-00123455530124554321013567776653012113378685200001443100012255
Q gi|254780933|r  515 FSSALWPFASLGWPEQT-AELKTYYPTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKM  593 (947)
Q Consensus       515 fdSg~~p~~~l~~p~~~-~e~~~~~P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KM  593 (947)
T Consensus       522 fdSg~~p~a~~~~p~~~~~~f~~~~PaD~i~eg~Dq~RgWF~sl~~~s~~~~------~~~Pfk~v~~~G~Vld~~G~KM  595 (1042)
T PRK06039        522 FDSGSMPYAQLHYPFENKELFEEHFPADFIVEGIDQTRGWFYTLLALSTALF------DRPPYKNVIVHGHVLDEDGQKM  595 (1042)
T ss_pred             EECCCCCEEEECCCCCCHHHHHCCCCCEEEEECCCHHEEEEEEEEEEEEEEC------CCCCCCEEEEEEEEECCCCEEC
T ss_conf             6358744069778643666662158644445232221014360003212234------8420025899503873686480


Q ss_pred             HHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCC--CCCCCCC--CCCCC
Q ss_conf             4312456530233202540344454312335567754341101-11000012344433332024--4457767--67743
Q gi|254780933|r  594 SKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERI-AGYRNFITKFWNAIRFSKMK--NARHSVS--FVPQD  668 (947)
Q Consensus       594 SKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i-~~~r~f~nKLwNa~rf~~~~--~~~~~~~--~~~~~  668 (947)
T Consensus       596 SKS~GNvidP~~vi~~yGADalRl~l~~~~~~~~d~~f~~~~v~e~~r~~~~~lwN~~rF~~~y~~ld~f~~~~~~~~~~  675 (1042)
T PRK06039        596 SKSLGNYVDPFEVFDKYGADALRWYLLSSSVPWEDLRFSEDGIREVVRKFLLPLWNVYSFFALYANLDGFDPNEAEEALD  675 (1042)
T ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             33678868979998860827999999966775556157799999999999999999999998742102799543555632


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHC
Q ss_conf             33155567799999999888998753100102457776531001368898647653056-71444321000145676403
Q gi|254780933|r  669 VKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFIKSILNQK-DSELVSETLSCFSYVLYNVC  747 (947)
Q Consensus       669 ~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie~~K~~l~~~-~~~~~~~~~~~l~~vl~~~l  747 (947)
T Consensus       676 ~~~~~DrWils~l~~~i~~v~~~~~~y~~~~a~~~l~~Fi-~dLs~wYi~~~r~R~~~~~~~~~k~~A~~tL~~vL~~l~  754 (1042)
T PRK06039        676 SRNELDRWILSRLNSLVKEVTEALDNYDITKAARAIRDFV-DDLSNWYIRRSRRRFWKEEDDPDKLAAYNTLYTVLETLS  754 (1042)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             1668789999999999999999997245999999999999-887799999977876036897899999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE-EE
Q ss_conf             456774489999999743566676756536635787877--477898999999999999999888980899777465-99
Q gi|254780933|r  748 KLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLI--IDDSESIEEVNWIIDLISKVRSIRTEMNVPLKAVVP-LV  824 (947)
Q Consensus       748 ~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~--~~d~~~~~~~~~~~~ii~~iR~~R~~~~i~~k~~i~-i~  824 (947)
T Consensus       755 ~llAP~~PFitEeiyq~L~~~---~~~eSVHl~~~P~~~~~~id~~le~~m~~~r~iv~~~r~~R~~~~ikvRqPL~~~~  831 (1042)
T PRK06039        755 RLMAPFTPFIAEEIYQNLKGE---TGPESVHLADWPEVDESLIDPELEAAMDLVREIVSLGRSARKKANIKVRQPLSRIT  831 (1042)
T ss_pred             HHHCCCHHHHHHHHHHHCCCC---CCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf             996501367699999844558---99951798146776612148999999999999999999999875997666266479


Q ss_pred             EECCCHHHHHHHHHHHHHH-HHHCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9649989999999989999-983246158711488873799928919999824454999999988999999999999998
Q gi|254780933|r  825 FANIDAHVRKRLECHKCII-DRLSSGNIIFADCPPDRSIQIILDGMVLFLAIGDFVDFVKERSRLKKSLEKVLDELSSIK  903 (947)
Q Consensus       825 ~~~~~~~~~~~l~~~~~ii-~~L~~~~i~~~~~~~~~~~~~v~~~~~~~i~l~~~iD~~~e~~rl~K~l~~l~~~i~~~~  903 (947)
T Consensus       832 i~~~~~~~~~~~~~~~~~I~~ElNVk~v~~~~~~~~~------------~~~~~kpn~~~LG~r~gk~~~~v~~~i~~~~  899 (1042)
T PRK06039        832 VAVKDEEVLEALEEYEDIIKDELNVKEVEFVDDEEDY------------VSYELKPNFKVLGPRLGKDVKAVIKAIKSGD  899 (1042)
T ss_pred             EEECCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCE------------EEEEEEECHHHHCHHHHHHHHHHHHHHHHCC
T ss_conf             9948989999999999999985283389997076612------------7999997768868776488999999998089


Q ss_pred             HH
Q ss_conf             66
Q gi|254780933|r  904 KK  905 (947)
Q Consensus       904 ~k  905 (947)
T Consensus       900 ~~  901 (1042)
T PRK06039        900 WE  901 (1042)
T ss_pred             HH
T ss_conf             99