HHsearch alignment for GI: 254780933 and conserved domain: PRK12300
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1297.08 Aligned_cols=771 Identities=23% Similarity=0.346 Sum_probs=603.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH------HCC---HHHHHHHHHHHH
Q ss_conf 65437889677999998767089835677881545408999999997674599877------779---899999999999
Q gi|254780933|r 52 LHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTRE------DIG---RDAFIEKVWEWK 122 (947)
Q Consensus 52 lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~------~~g---~~~f~~~~~~~~ 122 (947)
T Consensus 1 LH~GH~~~~ti~DiiaRykrM~G~~Vl~p~GwD~~GlPi~~~ae~-~~~~~~~~~~~~~~~~~~~~~~i~k~~~-~~~~~ 78 (888)
T PRK12300 1 LHIGHGRTYTIGDIYARYKRMKGYNVLFPMGFHVTGTPILGIAER-IAEGDPETIDIYRNLYGIPEEEIEKFKD-PEYIV 78 (888)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH-HHHCCHHHHHHHHHHHCCCHHHHHHHHH-HHHHH
T ss_conf 940554787999999999980799779999888899538999999-8604446899987751366888887500-99999
Q ss_pred HHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCCCCEE
Q ss_conf 99999999999980836642798115886799999999999998894331332022037767801486865414687669
Q gi|254780933|r 123 KESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFVVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLW 202 (947)
Q Consensus 123 ~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~~~~~ 202 (947)
T Consensus 79 ~~~~~~~~~q~~rlG~s~DW~re~~T~dp~y~~~v~w~F~kL~ekGliyrg~~~V~WcP~~~T~la~~ev~~~~~~~~~~ 158 (888)
T PRK12300 79 EYFSKEAKEAMKRIGYSIDWRREFTTTDPEYSKFIEWQFRKLKEKGLIVKGSHPVGWCPKDENPVGDHDTKDGEEPTIGE 158 (888)
T ss_pred HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEECCCCCCCCCCCCCHHHCCCCCCEEE
T ss_conf 99999999999983860636998664888799999999999997799497877867259878482220555087755168
Q ss_pred E--EEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHHHHHCCH----------------------
Q ss_conf 9--9965304530001245555544245688716999826740101024444441000----------------------
Q gi|254780933|r 203 Y--VRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTRPETMFGDVAIAVHPDDY---------------------- 258 (947)
Q Consensus 203 ~--ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~TtrPeTl~g~~a~~v~P~d~---------------------- 258 (947)
T Consensus 159 ~~~ikf~----------------------~~~~~l~v~TTrPeTl~g~ta~~v~Pd~~Yv~~~~~~e~~i~~~~~~~~l~ 216 (888)
T PRK12300 159 YTLIKFE----------------------GDDLILPAATLRPETVFGVTNLWVNPDAEYVVAEVDGEKWIVSKEAARKLS 216 (888)
T ss_pred EEEEEEC----------------------CCCEEEEEEECCHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9999971----------------------798279997268025430000377776323456427720089999999986
Q ss_pred ------------HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCC---CEECCCC
Q ss_conf ------------1231115423320248657321000034212232032124778556566430465311---1016777
Q gi|254780933|r 259 ------------RYKELIGKYATLPIVGRLIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFI---NILTPEA 323 (947)
Q Consensus 259 ------------~y~~l~G~~~~~Pl~~~~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~---~~~~~~g 323 (947)
T Consensus 217 ~~~~~~~~~~~~~g~~l~G~~~~~P~~~~~ipI~~ad~V~~~~GTG~V~~vPaHd~~Dy~~~~~~~~~~~~~i~ii~v~~ 296 (888)
T PRK12300 217 FQDREVEIIEEIKGSELIGKKVKNPVTGKEVPILPAKFVDPDNGTGVVMSVPAHAPYDYVALRDLDVEEIELIPLIKVEG 296 (888)
T ss_pred HCCCCEEEEEEECCCEECCEEEECCCCCCEEEEEECCEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECC
T ss_conf 22211367532026330350898678898735986140747889772896578987789999860724246777232056
Q ss_pred CCCCCC------------CCCCCCCC--------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 521366------------54445554--------3465546555310015123344888998888764333210223222
Q gi|254780933|r 324 KIFLSE------------NESFLENI--------VLSDEARNIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYRHIVP 383 (947)
Q Consensus 324 ~~~~~~------------~~~~~~~~--------~~~~~~~~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p 383 (947)
T Consensus 297 ~g~~p~~~~~~~~~i~~~~d~~l~~a~~~~y~~e~~~G~l~~~~~~~~G~~v~eA~~~i~~~L~~~g~~~~~y~~~~~~v 376 (888)
T PRK12300 297 YGEFPAKEIVEKMGIKSQKDPELEEATKELYKAEFHKGVLREDTGEYAGKPVREAREKITEDLIESGIAEIMYEFSEKPV 376 (888)
T ss_pred CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 67752777777507766442347777665422231175341565110697999999999999997799740303577886
Q ss_pred CCCCCCCCEEEE-EEHHHEECCC--CCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 356665532444-3122212145--4202333432002441121443113567641011123212354563102698389
Q gi|254780933|r 384 HCERSGVTIEPC-ITEQWYLDAK--VLAESAIRSAKNGCLSFIPQSWDKSYYEWLENIQPWCISRQIWWGHQIPVWYSPD 460 (947)
Q Consensus 384 ~c~R~~~~i~~~-~~~QWfi~~~--~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~~~DW~ISRqr~WG~pIPvw~~~~ 460 (947)
T Consensus 377 ~~-R~g~~~v~~~~~dQWFi~~~~~~~k~~~~~~~~--~i~~~P~~~~~~~~~~l~~l~DW~iSRqr~wGtpiP-w---d 449 (888)
T PRK12300 377 YC-RCGTECVVKVVKDQWFIDYSNPEWKELAHKCLD--RMRIIPEEARAEFENKIDWLKDRACARRRGLGTPLP-W---D 449 (888)
T ss_pred CC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-C---C
T ss_conf 78-999867634168764104787677899998761--665657213455787761468865456667697887-0---4
Q ss_pred CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCEEECCCCC---CCEECHHH-----HHH
Q ss_conf 9887657623445420345567877655541002568888310188241002202044233---32010111-----100
Q gi|254780933|r 461 GKLFVENTEDAALRSAIDYYLSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTWFSSALWP---FASLGWPE-----QTA 532 (947)
Q Consensus 461 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtWfdSg~~p---~~~l~~p~-----~~~ 532 (947)
T Consensus 450 ~~~~iesl~dstiy~~~yt~~~~~~~~~~~----------~~~--l~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (888)
T PRK12300 450 ERWVIESLSDSTIYMAYYTIAKKIRQYGLD----------PEQ--LTPEFFDYVFLGKGDPEEISKKTGIPKEILEEMRE 517 (888)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHCCCCC----------HHH--CCCHHCCEEECCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 882342277764001024687876334899----------567--58101304314899766666651998889998688
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCH
Q ss_conf 01234555301245543210135677766530121133786852000014431000122554312456530233202540
Q gi|254780933|r 533 ELKTYYPTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQYGA 612 (947)
Q Consensus 533 e~~~~~P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~yGa 612 (947)
T Consensus 518 ~f~~wyP~D~~~~G~D~i~~hl~f~~~~~~aif~~~----~~p-k~v~~~G~Vl~-eG~KMSKSkGNvV~P~eiI~~YGA 591 (888)
T PRK12300 518 EFEYWYPLDWRHSGKDLIPNHLTFFIFNHVAIFPEE----KWP-RGIVVNGFVLL-EGKKMSKSKGNVLPLREAIEEYGA 591 (888)
T ss_pred HHCEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCC----CCC-CEEEEEEEEEC-CCEECCCCCCCCCCHHHHHHHCCC
T ss_conf 646426760143531033567999998868871777----788-75798328945-987703034898998999976196
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34445431233556775434110111000012344433332024445776767743331555677999999998889987
Q gi|254780933|r 613 DALRFYFSIMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGM 692 (947)
Q Consensus 613 DalR~~l~~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~ 692 (947)
T Consensus 592 DalRl~l~~~a~~~~d~~~~~~~v~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~D~wils~l~~~i~~v~~~~ 663 (888)
T PRK12300 592 DVVRLYLASTAELSQDADFREKEAESIRRQLERFYELAVELAEEE--------SEEELRFIDKWLLSRLYSYIKEVTEAM 663 (888)
T ss_pred CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 299999997188556864579999999999999999999763267--------776776678999999999999999999
Q ss_pred HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 53100102457776531001368898647653056714443210001456764034567744899999997435666767
Q gi|254780933|r 693 ENHRFNDVSAVLYRFVWDELCDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMD 772 (947)
Q Consensus 693 e~~~f~~a~~~i~~F~~~~~~~~Yie~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l~~~~~~~ 772 (947)
T Consensus 664 e~~~f~~a~~~~~~~~~~~-~~~Y~~~~~~-----------~~~~~l~~~l~~~~~LLaP~~PhiaEElW~~Lg~----- 726 (888)
T PRK12300 664 EEFQTRKAIQEIFYNLLND-LRWYLRRGGE-----------PNNKVLREVIEIWIRLLAPFTPHLAEEIWEKLGG----- 726 (888)
T ss_pred HHCCHHHHHHHHHHHHHHH-HHHHHHHHCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_conf 8445999999999999999-9999987371-----------8899999999999999604104889999996799-----
Q ss_pred CCCEEEECCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 565366357878774--778989999999999999998889808997774659996499899999999899999832461
Q gi|254780933|r 773 KQGLLCHAQWPSLII--DDSESIEEVNWIIDLISKVRSIRTEMNVPLKAVVPLVFANIDAHVRKRLECHKCIIDRLSSGN 850 (947)
Q Consensus 773 ~~~si~~~~wP~~~~--~d~~~~~~~~~~~~ii~~iR~~R~~~~i~~k~~i~i~~~~~~~~~~~~l~~~~~ii~~L~~~~ 850 (947)
T Consensus 727 -~~sV~~a~wP~~de~~id~~~e~~~~~~~~~i~~ir~~~~~~~~~p~~-~~i~v--a~~wk~~~~~~~~~~~~~~~~-- 800 (888)
T PRK12300 727 -EGFVSLAPWPEPDESKIDEEAELAEEYVKNLIEDIKEIIKVAKINPKR-VYIYV--APDWKWEVLELAAEVKKDVGA-- 800 (888)
T ss_pred -CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE-EEEEE--CCHHHHHHHHHHHHHHHHHHH--
T ss_conf -983770799999934279899999999999999999999861999866-99997--969999999999998877766--
Q ss_pred EEEECCCCCCEEEEEECCEEEEEECCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH
Q ss_conf 587114888737999289199998244549--999999889999999999999986607923678588899999999999
Q gi|254780933|r 851 IIFADCPPDRSIQIILDGMVLFLAIGDFVD--FVKERSRLKKSLEKVLDELSSIKKKLENNQFVEKAPPSILQAEKERFS 928 (947)
Q Consensus 851 i~~~~~~~~~~~~~v~~~~~~~i~l~~~iD--~~~e~~rl~K~l~~l~~~i~~~~~kL~N~~Fv~kAP~~vv~~er~kl~ 928 (947)
T Consensus 801 ~-----------------------~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~~~~~~~ 854 (888)
T PRK12300 801 A-----------------------IPELMKDKVLDELKKLGKEVAKLIQKIIEERKLLVVKGIDEE---EVLRDAKDFLE 854 (888)
T ss_pred H-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH---HHHHHHHHHHH
T ss_conf 6-----------------------899998601177999999999999998877765126898889---99999999999