HHsearch alignment for GI: 254780933 and conserved domain: PRK12558

>PRK12558 glutamyl-tRNA synthetase; Provisional.
Probab=91.59  E-value=0.16  Score=29.64  Aligned_cols=89  Identities=16%  Similarity=0.212  Sum_probs=49.6

Q ss_pred             CCCCCCCCC-CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHC-CCCHHHH
Q ss_conf             530124554-3210--13567776653012113378685200001443100012255431245653023320-2540344
Q gi|254780933|r  540 TSVLVTGFD-ILFF--WVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVID-QYGADAL  615 (947)
Q Consensus       540 ~d~~~~G~D-i~r~--W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~-~yGaDal  615 (947)
T Consensus       200 VDD~~m~IthviRg~d~l~~t~-~~~~l~~alg~--~~p--~~~h~pli~~~~g~klskR~g~-~sv~~yr~~GylPeAl  273 (461)
T PRK12558        200 VDDIDMGVTHIIRGDDHVTNTG-VQIALFRALGA--EPP--VFGHHNLLTTASGEGLSKRTGA-LSVGSLREAGYEPMAV  273 (461)
T ss_pred             ECCCCCCCCEEEECHHHHHHCH-HHHHHHHHHCC--CCC--EEEECCEEECCCCCCCCCCCCC-CCHHHHHHCCCCCHHH
T ss_conf             5575578854463685886159-99999999579--998--0897134568999816666897-5899999879984789


Q ss_pred             HHHHHCCC-CCCCCCCCCCC
Q ss_conf             45431233-55677543411
Q gi|254780933|r  616 RFYFSIMA-VQGRDINLDLE  634 (947)
Q Consensus       616 R~~l~~~~-~~~~D~~fs~~  634 (947)
T Consensus       274 ~NyLalLGWs~~~~Ei~sl~  293 (461)
T PRK12558        274 ASLAVLLGTSENVDAAPDMA  293 (461)
T ss_pred             HHHHHHHCCCCCCHHHHHHH
T ss_conf             99999847999806776488