HHsearch alignment for GI: 254780933 and conserved domain: PRK12558
>PRK12558 glutamyl-tRNA synthetase; Provisional.
Probab=91.59 E-value=0.16 Score=29.64 Aligned_cols=89 Identities=16% Similarity=0.212 Sum_probs=49.6
Q ss_pred CCCCCCCCC-CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHC-CCCHHHH
Q ss_conf 530124554-3210--13567776653012113378685200001443100012255431245653023320-2540344
Q gi|254780933|r 540 TSVLVTGFD-ILFF--WVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVID-QYGADAL 615 (947)
Q Consensus 540 ~d~~~~G~D-i~r~--W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~-~yGaDal 615 (947)
T Consensus 200 VDD~~m~IthviRg~d~l~~t~-~~~~l~~alg~--~~p--~~~h~pli~~~~g~klskR~g~-~sv~~yr~~GylPeAl 273 (461)
T PRK12558 200 VDDIDMGVTHIIRGDDHVTNTG-VQIALFRALGA--EPP--VFGHHNLLTTASGEGLSKRTGA-LSVGSLREAGYEPMAV 273 (461)
T ss_pred ECCCCCCCCEEEECHHHHHHCH-HHHHHHHHHCC--CCC--EEEECCEEECCCCCCCCCCCCC-CCHHHHHHCCCCCHHH
T ss_conf 5575578854463685886159-99999999579--998--0897134568999816666897-5899999879984789
Q ss_pred HHHHHCCC-CCCCCCCCCCC
Q ss_conf 45431233-55677543411
Q gi|254780933|r 616 RFYFSIMA-VQGRDINLDLE 634 (947)
Q Consensus 616 R~~l~~~~-~~~~D~~fs~~ 634 (947)
T Consensus 274 ~NyLalLGWs~~~~Ei~sl~ 293 (461)
T PRK12558 274 ASLAVLLGTSENVDAAPDMA 293 (461)
T ss_pred HHHHHHHCCCCCCHHHHHHH
T ss_conf 99999847999806776488