HHsearch alignment for GI: 254780933 and conserved domain: PRK13208
>PRK13208 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1711.82 Aligned_cols=793 Identities=32% Similarity=0.536 Sum_probs=718.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 88767897898899999998769864453454899808997284499998654378896779999987670898356778
Q gi|254780933|r 2 MIDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQP 81 (947)
Q Consensus 2 ~~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~ 81 (947)
T Consensus 4 ~~~~~y~~~~iE~k~~~~W~~~~~f~~~-~~~~~~~~f~i~~ppPy~nG~lHiGH~~~~t~~D~~~Ry~rm~G~~Vl~~~ 82 (809)
T PRK13208 4 ELPKKYDPKEIEEKWQKIWEEEGIYKFD-DEDEKKPVYIIDTPPPTVSGKLHIGHVFSYTHTDFIARYQRMRGYNVFFPQ 82 (809)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 5657899499999999999867993678-666899969990699998897213166889999999999981799669988
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHH
Q ss_conf 81545408999999997674599877779899999999999999999999999808366427981158867999999999
Q gi|254780933|r 82 GTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAF 161 (947)
Q Consensus 82 G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F 161 (947)
T Consensus 83 G~D~~GlPie~~vek~~~----~~~~~~~~~~f~~~c~~~~~~~~~~~~~~~~~lG~s~Dw~r~~~T~d~~y~~~v~~~f 158 (809)
T PRK13208 83 GWDDNGLPTERKVEKYYG----IRAHDISREEFIELCRELTDEDEEKFRELWRRLGLSVDWSLEYRTISPEYRRISQKSF 158 (809)
T ss_pred CCCCCCHHHHHHHHHHCC----CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 458566899999999719----9901279999999999999999999999999828614068970758878999999999
Q ss_pred HHHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 99998894331332022037767801486865414687669999653045300012455555442456887169998267
Q gi|254780933|r 162 VVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTR 241 (947)
Q Consensus 162 ~~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Ttr 241 (947)
T Consensus 159 ~~L~~~Gliy~g~~~v~wcp~~~T~ls~~Ev~~~~~~~~~~~ikf~~~~--------------------~~~~l~iaTTr 218 (809)
T PRK13208 159 LDLYKKGLIYRAEAPVLWCPRCRTAIAQAEVEYKEREGKLNYIKFPVKE--------------------GGEKITIATTR 218 (809)
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECC--------------------CCCEEEEEECC
T ss_conf 9999779978742103677665755565676425677603999888517--------------------98648999578
Q ss_pred CCHHCHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECC
Q ss_conf 40101024444441000123111542332024865732100003421223203212477855656643046531110167
Q gi|254780933|r 242 PETMFGDVAIAVHPDDYRYKELIGKYATLPIVGRLIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILTP 321 (947)
Q Consensus 242 PeTl~g~~a~~v~P~d~~y~~l~G~~~~~Pl~~~~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~~ 321 (947)
T Consensus 219 PeTl~~~~av~v~P~d~ry~~l~G~~~~~P~~~~~vpi~~~~~V~~~~GTG~V~~~p~~d~~D~~~~~~~~l~~~~~id~ 298 (809)
T PRK13208 219 PELLPACVAVVVHPDDERYKHLVGKTAIVPLFGVEVPILADPLVDPDFGTGAVMICTFGDQTDVTWWRELNLPLRIIIDE 298 (809)
T ss_pred HHHHHHHHCEEECCCCHHHHHHCCCEEECCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCHHHEEHHHCCCCCEEEECC
T ss_conf 23765302041068857889845988971688966678634665046787835667898730330244305563000377
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHE
Q ss_conf 77521366544455543465546555310015123344888998888764333210223222356665532444312221
Q gi|254780933|r 322 EAKIFLSENESFLENIVLSDEARNIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWY 401 (947)
Q Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWf 401 (947)
T Consensus 299 ~G~~~~------------------~~~~~~G~~v~ea~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~pi~~~~~~QWf 360 (809)
T PRK13208 299 DGRITE------------------AAGKYAGLTIKEARKKIIEDLKEEGLLVKQEPITHNVKVCERCKTPIEILVTRQWF 360 (809)
T ss_pred CCCCCC------------------CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEECHHHH
T ss_conf 872424------------------66345996899989999999996899413445545564114789721687524566
Q ss_pred ECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCC-CCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCC
Q ss_conf 21454202333432002441121443113567641011-12321235456310269838998876576234454203455
Q gi|254780933|r 402 LDAKVLAESAIRSAKNGCLSFIPQSWDKSYYEWLENIQ-PWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYY 480 (947)
Q Consensus 402 i~~~~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~~~-DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~ 480 (947)
T Consensus 361 i~~~~~k~~~~~~~~--~i~~~P~~~~~r~~~wl~~~~~DW~iSRqr~WGtpiPiw~~~~~~~~~~~~~~~~~~l~~--- 435 (809)
T PRK13208 361 IKVLDLKEELLERAK--EIEWYPEHMRKRLENWIEGLNWDWCISRQRYFGTPIPVWYCKDCGGEGKPILADEEDLPV--- 435 (809)
T ss_pred HHHHHHHHHHHHHHH--CCEECCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHCCC---
T ss_conf 532777888887642--260058408889999984256542000012358644247605778756401487887377---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCEEECCCCCCCEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 67877655541002568888310188241002202044233320101111000123455530124554321013567776
Q gi|254780933|r 481 LSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTWFSSALWPFASLGWPEQTAELKTYYPTSVLVTGFDILFFWVARMMMM 560 (947)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtWfdSg~~p~~~l~~p~~~~e~~~~~P~d~~~~G~Di~r~W~~~~l~~ 560 (947)
T Consensus 436 -d~--~~~~~~~~~~~~~~~~~~~~~e~dvlD~WfdS~~~p~~~~~~~~~~~~f~~~~P~d~~~~G~Di~r~W~~~~l~~ 512 (809)
T PRK13208 436 -DP--TKDPPPGYSECCRCGPGEFEPETDVMDTWADSSITPLIVTGWLEDKELFEKLFPADLRPQGHDIIRTWLFYTILR 512 (809)
T ss_pred -CC--HHCCCCHHHCCCCCCCCCCEECCCCCCCEEECCCCHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHH
T ss_conf -81--101741110246668766330476666465567788876056321566754488524434059887399999999
Q ss_pred HHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
Q ss_conf 65301211337868520000144310001225543124565302332025403444543123355677543411011100
Q gi|254780933|r 561 GLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERIAGYR 640 (947)
Q Consensus 561 ~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i~~~r 640 (947)
T Consensus 513 ~~~l~------~~~Pfk~v~~~G~vld~~G~KMSKS~GNvi~p~eii~~yGADalR~~la-~~~~~~d~~~~~~~~~~~~ 585 (809)
T PRK13208 513 AYLLT------GKLPWKNIMISGMVLDPDGKKMSKSKGNVVDPEELLEKYGADAVRYWAA-NSRLGSDTRFSEKQIKIGK 585 (809)
T ss_pred HHHHC------CCCCCHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-CCCCCCCCCCCHHHHHHHH
T ss_conf 99853------8886020111460554677434777889689789865338099999996-1894446566899999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 00123444333320244457767677433315556779999999988899875310010245777653100136889864
Q gi|254780933|r 641 NFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFI 720 (947)
Q Consensus 641 ~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie~~ 720 (947)
T Consensus 586 ~~~~klwN~~rf~~~~~~~~~~~-~~~~~~~~lDrwils~l~~~i~~v~~~~e~y~f~~a~~~i~~F~~~~l~~~Yie~~ 664 (809)
T PRK13208 586 RLLTKLWNASRFVSSFIEPEKIE-EKAPILEPVDRWILAKLNRVVKKATEALENYDFAEALEEIESFFWHDFCDNYLELV 664 (809)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999703545666-76322578899999999999999999997358999999999999998789999998
Q ss_pred HHHHHCCC-HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC--CCCHHHHHHHH
Q ss_conf 76530567-1444321000145676403456774489999999743566676756536635787877--47789899999
Q gi|254780933|r 721 KSILNQKD-SELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLI--IDDSESIEEVN 797 (947)
Q Consensus 721 K~~l~~~~-~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~--~~d~~~~~~~~ 797 (947)
T Consensus 665 k~R~~~~~~~~~~~~a~~tL~~vL~~~l~llaP~~PfiaEeiw~~L~~------~~sV~~~~wP~~~~~~~d~~~~~~~~ 738 (809)
T PRK13208 665 KSRAYGEDGSEEQKSAIYTLYTVLRTLLKLLAPFMPFITEEIYSWLYG------GSSVHRASWPEVDELLIDEEDEELGE 738 (809)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 898714888188999999999999999999987889999999986899------98188579999982006989999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC-CCEEEECCCCC
Q ss_conf 999999999988898089977746599964998999999998999998324-61587114888
Q gi|254780933|r 798 WIIDLISKVRSIRTEMNVPLKAVVPLVFANIDAHVRKRLECHKCIIDRLSS-GNIIFADCPPD 859 (947)
Q Consensus 798 ~~~~ii~~iR~~R~~~~i~~k~~i~i~~~~~~~~~~~~l~~~~~ii~~L~~-~~i~~~~~~~~ 859 (947)
T Consensus 739 ~~~~ii~~ir~~R~~~~i~~r~pl~~i~i~~~~~~~~~l~~~~~~i~~~~nv~~v~~~e~~~e 801 (809)
T PRK13208 739 LAKEILSAVRKYKSEAGLSLKAPLKKVEIYADASVPELLEEAEEDLKAVHNIEEIELVEGDPE 801 (809)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH
T ss_conf 999999999999997596988824558996898999999999999998538062799658841