HHsearch alignment for GI: 254780933 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=1631.42 Aligned_cols=792 Identities=22% Similarity=0.320 Sum_probs=680.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 87678978988999999987698644534548998089972844999986543788967799999876708983567788
Q gi|254780933|r 3 IDKTYDFAFIEQKSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPG 82 (947)
Q Consensus 3 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G 82 (947)
T Consensus 20 fp~r~nl~~~E~~~~~~W~~~~~y~~~~~~~~~~~~f~~~dGPPyanG~lH~GHaln~tikDii~Rykrm~G~~V~~~~G 99 (966)
T PRK13804 20 FPMRAGLPQKEPEIQARWEEIDLYKKLREQAKGRPKFVLHDGPPYANGNIHIGHALNKILKDVIVRSKQMLGFDANYVPG 99 (966)
T ss_pred CCCCCCCHHHCHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99888812326999999875489999998568999769957999999986122556668999999998748996689997
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf 15454089999999976745998777798999999999999999999999998083664279811588679999999999
Q gi|254780933|r 83 TDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFV 162 (947)
Q Consensus 83 ~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~ 162 (947)
T Consensus 100 wD~hGLPiE~~vek~l~~~~~-~~~~~~~~~f~~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~dp~y~~~~~~~F~ 178 (966)
T PRK13804 100 WDCHGLPIEWKIEEKYRAKGK-NKDEVPLNEFRKECREYALSWIDVQREEFKRLGVIGDWENPYTTMDFHAEARIAREFM 178 (966)
T ss_pred CCCCCHHHHHHHHHHHHHCCC-CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 688878999999997765289-8233899999999999999999999999998292022589842289899999999999
Q ss_pred HHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 99988943313320220377678014868654146876699996530453000124555554424568871699982674
Q gi|254780933|r 163 VLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTRP 242 (947)
Q Consensus 163 ~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~TtrP 242 (947)
T Consensus 179 ~l~ekGliYr~~~pV~Wcp~~~TaLA~~EVey~d~~s~s~~v~f~v~~~~~~--------------~~~~~~l~iwTTtP 244 (966)
T PRK13804 179 KFAAKGQLYRGSKPVMWSVVERTALAEAEVEYHDHESDTIWVKFPVKDGKGI--------------LLTGASVVIWTTTP 244 (966)
T ss_pred HHHHCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEECCEEEEEEEECCCCCC--------------CCCCCCEEEEECCC
T ss_conf 9998799884385147689888662367547667866669999873466200--------------04787067750785
Q ss_pred CHHCHHHHHHHHHCCH----------------------------------------------HHHHHCCCEEEECCC---
Q ss_conf 0101024444441000----------------------------------------------123111542332024---
Q gi|254780933|r 243 ETMFGDVAIAVHPDDY----------------------------------------------RYKELIGKYATLPIV--- 273 (947)
Q Consensus 243 eTl~g~~a~~v~P~d~----------------------------------------------~y~~l~G~~~~~Pl~--- 273 (947)
T Consensus 245 wTl~~n~avav~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~l~e~~~~~~~~~~~~~~~~~~G~~l~g~~~~~Pl~~~~ 324 (966)
T PRK13804 245 WTIPANRAISYSPDIEYGLYEVTGAENDNWAKPGEKLVVADALAESVAKKAGVESFERVRDVKADDLEAIVCAHPLKGLD 324 (966)
T ss_pred CHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEEECCCEECCCEEECCCCCCC
T ss_conf 02202102024577643789950454211244551566547789999987376422787300150004766526665556
Q ss_pred ---CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCC------CEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ---8657321000034212232032124778556566430465311------1016777521366544455543465546
Q gi|254780933|r 274 ---GRLIPIVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFI------NILTPEAKIFLSENESFLENIVLSDEAR 344 (947)
Q Consensus 274 ---~~~ipi~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~------~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 344 (947)
T Consensus 325 ~~~~~~~pi~~~d~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~~L~~~~~~~i~~~vd~~G~~~~~~~~~~----------g 394 (966)
T PRK13804 325 GGYEFEVPVLDGDHVTDDAGTGFVHTAPGHGREDFEVWMKYGRELEVRTAIPFTVDEDGFYTEDAPGFG----------G 394 (966)
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHC----------C
T ss_conf 666715789816831567785637755778878899999839873103577875688760654560012----------5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCC-------CHHHHHHHHHC
Q ss_conf 55531001512334488899888876433321022322235666553244431222121454-------20233343200
Q gi|254780933|r 345 NIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKV-------LAESAIRSAKN 417 (947)
Q Consensus 345 ~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~-------~~~~~l~~~~~ 417 (947)
T Consensus 395 ~~v~~~~G~~~~~a~~~Ii~~L~e~g~L~~~~~~~HsyP~~wR~~~Pvi~r~t~QWFi~~~~~~~~~~~lr~~~l~~i~- 473 (966)
T PRK13804 395 ARVIDDKGKKYGDANKAVIEALIEAGLLLARGRLKHSYPHSWRSKKPVIFRNTPQWFISMDKDLGDGGTLRSRALDAIK- 473 (966)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHH-
T ss_conf 5421346873656279999999967996455641247763456786279960461478735343213899999998765-
Q ss_pred CCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 24411214431135676410111232123545631026983899887657623445420345567877655-54100256
Q gi|254780933|r 418 GCLSFIPQSWDKSYYEWLENIQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMT-VKVRKMIK 496 (947)
Q Consensus 418 ~~i~~~P~~~~~~~~~wl~~~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 496 (947)
T Consensus 474 -~v~~~P~~~~~r~~~~l~~~~DW~ISRQRyWG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g-~d~w~~~~~~~~~~~ 551 (966)
T PRK13804 474 -KTRFVPAAGQNRLRGMIEDRPDWVISRQRAWGVPIPVFVDENGEILMDDEVNERIADAFEEEG-ADAWFAEGAKERFLG 551 (966)
T ss_pred -HCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHCCC
T ss_conf -435065343445551215786766631134588751798379974457567789999987618-763334574765588
Q ss_pred CCCCCCCEEECCCEECCEEECCCCCCCEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 88883101882410022020442333201011110001234555301245543210135677766530121133786852
Q gi|254780933|r 497 DGNISDLLKRDEDVLDTWFSSALWPFASLGWPEQTAELKTYYPTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPF 576 (947)
Q Consensus 497 ~~~~~~~~~r~~DvlDtWfdSg~~p~~~l~~p~~~~e~~~~~P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pf 576 (947)
T Consensus 552 ~~~~~~~~~r~~DvlD~WfdSgss~~~~~~---~~--~~~~~PaD~y~eG~Dq~rgWF~s~l~~s~~~~------~~~Pf 620 (966)
T PRK13804 552 GFHPGEEWTKVTDILDVWFDSGSTHAFVLE---DR--PDLPWPADLYLEGSDQHRGWFHSSLLESCGTR------GRAPY 620 (966)
T ss_pred CCCCHHHHEECCCHHHHHHHCCCCCCCCCC---CH--HHCCCCCCEEECCCCHHHHHHHHHHHHHHCCC------CCCCC
T ss_conf 878745507413114466515775320115---85--44589741686254188869999998742206------88774
Q ss_pred CHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 00001443100012255431245653023320254034445431233556775434110111000012344433332024
Q gi|254780933|r 577 HIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMK 656 (947)
Q Consensus 577 k~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~ 656 (947)
T Consensus 621 k~v~~hG~VlDe~G~KMSKS~GNvvdP~~ii~~yGADalRl~~as~-~~~~d~~~~~~~l~~~~~~~~ki~Nt~rf~l~n 699 (966)
T PRK13804 621 KAVLTHGFTLDEKGEKMSKSLGNVVDPQDVIKQSGADILRLWVASV-DYQDDQRIGKEILKTNAETYRKLRNTLRWMLGT 699 (966)
T ss_pred CCEEECCEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5103411689889888878788989989999872921888999847-754463456899999999999999999999986
Q ss_pred CCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC--CHHHHH
Q ss_conf 4457767-6774333155567799999999888998753100102457776531001368898647653056--714443
Q gi|254780933|r 657 NARHSVS-FVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFIKSILNQK--DSELVS 733 (947)
Q Consensus 657 ~~~~~~~-~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie~~K~~l~~~--~~~~~~ 733 (947)
T Consensus 700 l~~f~~~~~~~~~~l~~~D~wil~~l~~~~~~v~~~~~~Y~f~~a~~~l~~F~~~dLs~~Yle~~Kdrly~~~~~~~~rr 779 (966)
T PRK13804 700 LAHFDPGEAVAYADLPELERLMLHRLNELDATVRKAYEAFDFKTIYKALVNFMTVDLSAFYFDIRKDALYCDAPSSLRRK 779 (966)
T ss_pred HCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 42798323489223528789999999999999999851135999999999999987879999884375405799839999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC--CCCHHHHHHHHHHHHH---HH-HHH
Q ss_conf 21000145676403456774489999999743566676756536635787877--4778989999999999---99-999
Q gi|254780933|r 734 ETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLI--IDDSESIEEVNWIIDL---IS-KVR 807 (947)
Q Consensus 734 ~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~--~~d~~~~~~~~~~~~i---i~-~iR 807 (947)
T Consensus 780 saq~~L~~il~~l~~llAPi~Pf~aEEiw~~~~~~----~~~Sv~l~~~p~~~~~~~d~~l~~~w~~l~~lr~~V~~~lE 855 (966)
T PRK13804 780 AALTVIYEIFDRLTKWLAPILPFTTEEAWLYRYPE----EEVSVHLEQFPETPAFWRDDALAEKWRKFRAVRRVVTGALE 855 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999767289999999725578----99876711489997210697999999999999999999999
Q ss_pred HHHHHCCCCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf 8889808997774659996499899999999
Q gi|254780933|r 808 SIRTEMNVPLKAVVPLVFANIDAHVRKRLEC 838 (947)
Q Consensus 808 ~~R~~~~i~~k~~i~i~~~~~~~~~~~~l~~ 838 (947)
T Consensus 856 ~aR~~k~IgssLea~v~i~~~~~~~~~~l~~ 886 (966)
T PRK13804 856 IERAAKRIGSSLEAAPTVYISDPELLAALEG 886 (966)
T ss_pred HHHHCCCCCCCCEEEEEEEECCHHHHHHHCC
T ss_conf 9987699897330579998186899865250