HHsearch alignment for GI: 254780933 and conserved domain: cd07375

>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains. This domain is found in a variety of class Ia aminoacyl tRNA synthetases, C-terminal to the catalytic core domain. It recognizes and specifically binds to the anticodon of the tRNA. Aminoacyl tRNA synthetases catalyze the transfer of cognate amino acids to the 3'-end of their tRNAs by specifically recognizing cognate from non-cognate amino acids. Members include valyl-, leucyl-, isoleucyl-, cysteinyl-, arginyl-, and methionyl-tRNA synthethases. This superfamily also includes a domain from MshC, an enzyme in the mycothiol biosynthetic pathway.
Probab=99.90  E-value=6.6e-24  Score=193.19  Aligned_cols=117  Identities=20%  Similarity=0.365  Sum_probs=103.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCH
Q ss_conf             11011100001234443333202444577676774333155567799999999888998753100102457776531001
Q gi|254780933|r  633 LERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDEL  712 (947)
Q Consensus       633 ~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~  712 (947)
T Consensus         1 eerve~~r~F~nKLWNa~rF~~~~~~~~~~~~-~~~~l~~~DrWIls~l~~~i~~v~~~~e~y~f~~a~~~l~~F~w~~-   78 (117)
T cd07375           1 EERLKQARAFLNRLYRLLSFFRKALGGTQPKW-DNELLEEADRELLARLQEFIKRTTNALEALDPTTAVQELFKFTNEL-   78 (117)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-
T ss_conf             99999999999899999999985688788865-6322776279999999899999999999278999999999999936-


Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf             368898647653056714443210001456764034567744
Q gi|254780933|r  713 CDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPII  754 (947)
Q Consensus       713 ~~~Yie~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~  754 (947)
T Consensus        79 -dwYie~~K~r~~~e~--~~~~~~~~L~~vl~~~lkLlhPFt  117 (117)
T cd07375          79 -NWYLDELKPALQTEE--LREAVLAVLRAALVVLTKLLAPFT  117 (117)
T ss_pred             -HHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             -999999656304827--579999999999999999819999