HHsearch alignment for GI: 254780933 and conserved domain: cd07962
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases. This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Probab=99.97 E-value=1.7e-31 Score=248.62 Aligned_cols=135 Identities=36% Similarity=0.751 Sum_probs=126.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 34110111000012344433332024445776767743331555677999999998889987531001024577765310
Q gi|254780933|r 631 LDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWD 710 (947)
Q Consensus 631 fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~ 710 (947)
T Consensus 1 ~~e~~i~~~~rf~nKlwN~~rf~~~~~~~~~~~~~~~~~~~~~Dkwil~~l~~~~~~i~~~~~~~~f~~a~~~l~~F~~~ 80 (135)
T cd07962 1 FDEKRVEGGRNFCNKLWNAARFVLMNLEDDDEPEEDPESLSLADRWILSRLNKTVEEVTEALENYRFSEAATALYEFFWN 80 (135)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 98999899999999999999999875453687546610077999999999999999999999865899999999999899
Q ss_pred CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf 0136889864765305671444321000145676403456774489999999743
Q gi|254780933|r 711 ELCDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHV 765 (947)
Q Consensus 711 ~~~~~Yie~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l 765 (947)
T Consensus 81 ~ls~~Yie~~K~rl~~~~~~~~~~~~~~l~~~l~~~l~llaP~~PfitEeiw~~l 135 (135)
T cd07962 81 DFCDWYLELVKPRLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135 (135)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9989999997998729978999999999999999999999878799999998439