HHsearch alignment for GI: 254780933 and conserved domain: pfam00749
>pfam00749 tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain. Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a single glutamyl-tRNA synthetase aminoacylates both tRNA(Glu) and tRNA(Gln).
Probab=98.20 E-value=3.3e-05 Score=56.53 Aligned_cols=89 Identities=31% Similarity=0.427 Sum_probs=60.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHH
Q ss_conf 44999986543788967799999876708983567788154540899999999767459987777989999999999999
Q gi|254780933|r 45 PPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKE 124 (947)
Q Consensus 45 pP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~ 124 (947)
T Consensus 7 APSPTG~lHiG~~rtAl~n~l~Ar--~~~G~fiLRIEDtD~~R---------------------------------~~~e 51 (314)
T pfam00749 7 APSPTGYLHIGHARTALFNYLFAK--NYNGKFILRFDDTDPER---------------------------------EKPE 51 (314)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH--HHCCEEEEEECCCCCCC---------------------------------CCHH
T ss_conf 889898644899999999999999--80998999968789886---------------------------------8768
Q ss_pred HHHHHHHHHHHHCCEEECCCC-EECCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 999999999980836642798-115886799999999999998894331
Q gi|254780933|r 125 SGGSILSQLKRLGASCDWSRE-RFTMDEGMSNAVRNAFVVLYKDGLIYR 172 (947)
Q Consensus 125 ~~~~~~~~~~~lG~~~Dw~r~-y~T~d~~y~~~v~~~F~~L~~~gliy~ 172 (947)
T Consensus 52 ~~~~I~~dL~wLGl--~wDe~~~~QS~--r~~~Y~~~~~~L~~~g~aY~ 96 (314)
T pfam00749 52 YEESILEDLKWLGI--KWDEKPYYQSD--RFDIYYKYAEELIEKGLAYV 96 (314)
T ss_pred HHHHHHHHHHHHCC--CCCCCCEEHHC--CHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999537--89988355202--09999999999997499522