HHsearch alignment for GI: 254780933 and conserved domain: pfam00749

>pfam00749 tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain. Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a single glutamyl-tRNA synthetase aminoacylates both tRNA(Glu) and tRNA(Gln).
Probab=98.20  E-value=3.3e-05  Score=56.53  Aligned_cols=89  Identities=31%  Similarity=0.427  Sum_probs=60.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHH
Q ss_conf             44999986543788967799999876708983567788154540899999999767459987777989999999999999
Q gi|254780933|r   45 PPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKE  124 (947)
Q Consensus        45 pP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~  124 (947)
T Consensus         7 APSPTG~lHiG~~rtAl~n~l~Ar--~~~G~fiLRIEDtD~~R---------------------------------~~~e   51 (314)
T pfam00749         7 APSPTGYLHIGHARTALFNYLFAK--NYNGKFILRFDDTDPER---------------------------------EKPE   51 (314)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHH--HHCCEEEEEECCCCCCC---------------------------------CCHH
T ss_conf             889898644899999999999999--80998999968789886---------------------------------8768


Q ss_pred             HHHHHHHHHHHHCCEEECCCC-EECCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             999999999980836642798-115886799999999999998894331
Q gi|254780933|r  125 SGGSILSQLKRLGASCDWSRE-RFTMDEGMSNAVRNAFVVLYKDGLIYR  172 (947)
Q Consensus       125 ~~~~~~~~~~~lG~~~Dw~r~-y~T~d~~y~~~v~~~F~~L~~~gliy~  172 (947)
T Consensus        52 ~~~~I~~dL~wLGl--~wDe~~~~QS~--r~~~Y~~~~~~L~~~g~aY~   96 (314)
T pfam00749        52 YEESILEDLKWLGI--KWDEKPYYQSD--RFDIYYKYAEELIEKGLAYV   96 (314)
T ss_pred             HHHHHHHHHHHHCC--CCCCCCEEHHC--CHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999999537--89988355202--09999999999997499522