HHsearch alignment for GI: 254780933 and conserved domain: pfam09334
>pfam09334 tRNA-synt_1g tRNA synthetases class I (M). This family includes methionyl tRNA synthetases.
Probab=100.00 E-value=0 Score=616.36 Aligned_cols=373 Identities=26% Similarity=0.384 Sum_probs=299.8
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHH
Q ss_conf 89972844999986543788967799999876708983567788154540899999999767459987777989999999
Q gi|254780933|r 39 FCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKV 118 (947)
Q Consensus 39 f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~ 118 (947)
T Consensus 1 ~~I~~ppP~~nG~lHiGHa~~~~~~Dvl~R~~r~~G~~V~~v~g~D~~g~~i~~ka~~~-----g~~~------------ 63 (388)
T pfam09334 1 FLITTALPYVNGPPHIGHLYTTIPADVYARYLRLRGYDVLFVTGTDEHGTKIELAAEKE-----GVTP------------ 63 (388)
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHC-----CCCH------------
T ss_conf 98937898888860022418899999999999956997071386485379999999984-----9999------------
Q ss_pred HHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCC
Q ss_conf 99999999999999998083664279811588679999999999999889433133202203776780148686541468
Q gi|254780933|r 119 WEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFVVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVD 198 (947)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~ 198 (947)
T Consensus 64 ~e~~~~y~~~~~~~~~~lgi~~--D~~~~t~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~y~~~~~~~l~d~~v~g---- 137 (388)
T pfam09334 64 QELVDRYHEEFKELFKKFNISF--DDFIRTTSERHKELVQEFFLKLYEKGDIYEGEYEGWYCVSDERFLPDRYVEG---- 137 (388)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHCC----
T ss_conf 9999999999999999839967--8786579846899999998751406815532411223666666665333075----
Q ss_pred CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCC
Q ss_conf 76699996530453000124555554424568871699982674010102444444100012311154233202486573
Q gi|254780933|r 199 GNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTRPETMFGDVAIAVHPDDYRYKELIGKYATLPIVGRLIP 278 (947)
Q Consensus 199 ~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~TtrPeTl~g~~a~~v~P~d~~y~~l~G~~~~~Pl~~~~ip 278 (947)
T Consensus 138 -------------------------------------------------------------------~---cp~~~~--- 144 (388)
T pfam09334 138 -------------------------------------------------------------------T---CPYCGS--- 144 (388)
T ss_pred -------------------------------------------------------------------C---CCCCCC---
T ss_conf -------------------------------------------------------------------4---575575---
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 21000034212232032124778556566430465311101677752136654445554346554655531001512334
Q gi|254780933|r 279 IVSDVYPDPEFGDGAVKVTPAHDFNDFEIAKRHGLGFINILTPEAKIFLSENESFLENIVLSDEARNIFSEFEGLDCFAA 358 (947)
Q Consensus 279 i~~~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~a 358 (947)
T Consensus 145 ------------------~~~~~~~~------------------------------------------------------ 152 (388)
T pfam09334 145 ------------------EDARGDQC------------------------------------------------------ 152 (388)
T ss_pred ------------------CCCCCCHH------------------------------------------------------
T ss_conf ------------------01366410------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHC-
Q ss_conf 4888998888764333210223222356665532444312221214542023334320024411214431135676410-
Q gi|254780933|r 359 RSKIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCLSFIPQSWDKSYYEWLEN- 437 (947)
Q Consensus 359 ~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~- 437 (947)
T Consensus 153 --------e~~G~--~~e~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~l~~~~~~~~~-~~~~~~~~~~~~wl~~~ 221 (388)
T pfam09334 153 --------EVCGR--PLEPTELINPRSAISGSTPELKEEEHYFFRLSKFQDKLLEWIKENPD-EPPSNVNEVVLSWLKEG 221 (388)
T ss_pred --------HCCCC--CCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHCC
T ss_conf --------02388--27867741764446799754432441233068899999999954998-89889999999998668
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCEEEC
Q ss_conf 11123212354563102698389988765762344542034556787765554100256888831018824100220204
Q gi|254780933|r 438 IQPWCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTWFSS 517 (947)
Q Consensus 438 ~~DW~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtWfdS 517 (947)
T Consensus 222 l~Dw~ISR~~~WG~~iP~~--------------------------------------------------~~~~~~vW~da 251 (388)
T pfam09334 222 LKDLSITRDLDWGIPVPGD--------------------------------------------------PGKVIYVWFDA 251 (388)
T ss_pred CCCCCCCCCCCCCCCCCCC--------------------------------------------------CCEEEEEECCC
T ss_conf 8876441247787504888--------------------------------------------------98068772356
Q ss_pred CCCCCCEECHHHH-HHCCCCCCCCC-----CCCCCCCCCCCH----HHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf 4233320101111-00012345553-----012455432101----3567776653012113378685200001443100
Q gi|254780933|r 518 ALWPFASLGWPEQ-TAELKTYYPTS-----VLVTGFDILFFW----VARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRD 587 (947)
Q Consensus 518 g~~p~~~l~~p~~-~~e~~~~~P~d-----~~~~G~Di~r~W----~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld 587 (947)
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~G~Di~~fh~~~~~a~~~~-----------~~~~~~~~~~~~g~v~~ 320 (388)
T pfam09334 252 LIGYISATKYLSGNPEKWKKFWADDPDTEIVHFIGKDIIRFHAIYWPAMLMA-----------AGLPLPTQVFAHGWLTV 320 (388)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHH-----------CCCCCCCEEEEEEEEEE
T ss_conf 5552000277777817888644367762000106764142017899999983-----------89998866787579975
Q ss_pred HHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH--HHHHHHH-HHHH
Q ss_conf 012255431245653023320254034445431233556775434110111000--0123444-3333
Q gi|254780933|r 588 KNGQKMSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERIAGYRN--FITKFWN-AIRF 652 (947)
Q Consensus 588 ~~G~KMSKS~GNvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i~~~r~--f~nKLwN-a~rf 652 (947)
T Consensus 321 -~G~KMSKSlGN~i~~~d~i~~ygaDalR~~L~~~~~~~~d~~Fs~~~~~~~~n~~~~~kl~N~~~r~ 387 (388)
T pfam09334 321 -EGGKMSKSRGNVVDPDELLDRYGVDALRYYLAREAPEGKDGDFSWEDFVERVNSELANDLGNLVNRT 387 (388)
T ss_pred -CCEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf -9944478699878889999887828999999953999899989999999998799888776577330