RPSBLAST alignment for GI: 254780933 and conserved domain: TIGR00396

>gnl|CDD|161857 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family. The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both eubacterial and mitochondrial leucyl-tRNA synthetases. It generates higher scores for some valyl-tRNA synthetases than for any archaeal or eukaryotic cytosolic leucyl-tRNA synthetase. Note that the enzyme from Aquifex aeolicus is split into alpha and beta chains; neither chain is long enough to score above the trusted cutoff, but the alpha chain scores well above the noise cutoff. The beta chain must be found by a model and search designed for partial length matches. Length = 842
 Score = 89.0 bits (221), Expect = 5e-18
 Identities = 94/453 (20%), Positives = 171/453 (37%), Gaps = 94/453 (20%)

Query: 438 IQPWCISRQIWWGHQIPVWY--------SPDGKLFVENTEDAALRSAIDYYLSQDNDMTV 489
           ++ W  SRQ +WG  IP+ +         P+  L V   E        +  LS+  +  V
Sbjct: 411 LRDWLFSRQRYWGEPIPIIHCEDGGAVPVPEEDLPVILPELVNYDPDGNSPLSRIQEW-V 469

Query: 490 KVRKMIKDGNISDLLKRDEDVLDTWFSSALWPFASLGWPEQTAE------LKTYYPTSVL 543
            V       +      R+ D +DT+  S+ W +     P+ T +       + + P  + 
Sbjct: 470 NV----TCPSCGKPALRETDTMDTFAGSS-WYYLRYLDPKNTDQPFDKEKAEYWLPVDLY 524

Query: 544 VTGFD--ILFFWVARM------------------------MMMGLYFMKDAEGKGIEPFH 577
           + G +  IL    AR                         M++G Y+  + +     P  
Sbjct: 525 IGGAEHAILHLLYARFWHKFLYDIGYVSTKEPFKKLINQGMVLGFYYPPNGK---SPPDE 581

Query: 578 IVYMHALVRDKNG--------QKMSKSKGNVVDPIDVIDQYGADALRFYFSIMAVQGRDI 629
           +       +DK+G        +KMSKSKGN +DP +++ ++GADALR Y   M      +
Sbjct: 582 LTERDEKAKDKSGGELVVVGYEKMSKSKGNGIDPQEIVKKHGADALRLYIMFMGPIAASL 641

Query: 630 NLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVT 689
             +   + G R F+ + WN   F  +       +++   +     K + + +   +  VT
Sbjct: 642 EWNDSGLEGARRFLDRVWN--LFYNILGELDGKTYLTPTILEEAQKELRRDVHKFLKKVT 699

Query: 690 VGMENHR-FNDVSAVLYRFVWDELCDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCK 748
             +E    FN   +              +  + ++   K   L  E L  F  VL     
Sbjct: 700 EDLEKLESFNTAISA------------MMILLNALYKAKKDALYLEYLKGFLTVLS---- 743

Query: 749 LLHPIIPFVTEDLYSHVSPQDDMDKQGLLCHAQWP----SLIIDDSESIEEVNWIIDLIS 804
              P  P + E+L+  +  +  + KQ     A+WP    + +++D  +I     ++ +  
Sbjct: 744 ---PFAPHLAEELWEKLGSEPFIIKQ-----AKWPKVDETALVEDKVTI-----VLQVNG 790

Query: 805 KVRSIRTEMNVPLKAVVPLVFANIDAHVRKRLE 837
           K ++ +T      +  V    A  D  V+K LE
Sbjct: 791 KFKAKKTVPKDADEEQV-EELAKQDPEVKKYLE 822