RPSBLAST alignment for GI: 254780933 and conserved domain: cd00814
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases. Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function. Length = 319
Score = 49.5 bits (119), Expect = 4e-06
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 23/131 (17%)
Query: 46 PNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLT 105
P V G H+GH + T + D+ R++R+RG +VL+ GTD G + E
Sbjct: 9 PYVNGVPHLGHLYGTVLADVFARYQRLRGYDVLFVTGTDEHGTKIEQKAEE--------- 59
Query: 106 REDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERF--TMDEGMSNAVRNAFVV 163
E + +K E K L S D F T V+ F
Sbjct: 60 -EGVTPQELCDKYHE-------IFKDLFKWLNISFD----YFIRTTSPRHKEIVQEFFKK 107
Query: 164 LYKDGLIYRDK 174
LY++G IY +
Sbjct: 108 LYENGYIYEGE 118