HHsearch alignment for GI: 254780934 and conserved domain: COG1240

Probab=99.60  E-value=1.1e-13  Score=100.17  Aligned_cols=173  Identities=18%  Similarity=0.219  Sum_probs=135.4

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC-CCCEEEEECCCCHHHHHHH
Q ss_conf             778724999965786451131353137999999887632210023665673489999826-8505610204786899999
Q gi|254780934|r  168 TDARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFS-NKIEEFFLLEWGVSHLQRK  246 (374)
Q Consensus       168 ~~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~  246 (374)
T Consensus        75 ~r~g~lvvfvVDASgSM~~~-----~Rm~aaKG~~~~lL~dAYq-----~RdkvavI~F~G~~A~lll~pT~sv~~~~~~  144 (261)
T COG1240          75 GRAGNLIVFVVDASGSMAAR-----RRMAAAKGAALSLLRDAYQ-----RRDKVAVIAFRGEKAELLLPPTSSVELAERA  144 (261)
T ss_pred             CCCCCCEEEEEECCCCCHHH-----HHHHHHHHHHHHHHHHHHH-----CCCEEEEEEECCCCCEEEECCCCCHHHHHHH
T ss_conf             47677489999476542057-----8999999999999999997-----0354899996377653884786539999999


Q ss_pred             HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC---HHHHHHHHHHHHCCCEEE
Q ss_conf             86013368774442036767764322233331025788656427999806877888880---689999999997898799
Q gi|254780934|r  247 IKYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKED---QQSLYYCNEAKKRGAIVY  323 (374)
Q Consensus       247 i~~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~---~~~~~~~~~~k~~gi~Iy  323 (374)
T Consensus       145 L~~l~~GG-~TPL~~aL~~a~ev~~r~~-------r~~p~~~~~~vviTDGr~n~~~~~~~~~e~~~~a~~~~~~g~~~l  216 (261)
T COG1240         145 LERLPTGG-KTPLADALRQAYEVLAREK-------RRGPDRRPVMVVITDGRANVPIPLGPKAETLEAASKLRLRGIQLL  216 (261)
T ss_pred             HHHCCCCC-CCCHHHHHHHHHHHHHHHH-------CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             98389999-8843999999999999751-------048876538999737965888898657799999999852688479


Q ss_pred             EEEECCCC-CHHHHHHHC--CCCCEEEECCHHH--HHHHH
Q ss_conf             99924822-278899823--8981798389899--99999
Q gi|254780934|r  324 AIGIRVIR-SHEFLRACA--SPNSFYLVENPHS--MYDAF  358 (374)
Q Consensus       324 tIg~~~~~-~~~~L~~~A--s~~~~~~a~~~~~--L~~~f  358 (374)
T Consensus       217 vid~e~~~~~~g~~~~iA~~~Gg~~~~L~~l~~~~i~~~~  256 (261)
T COG1240         217 VIDTEGSEVRLGLAEEIARASGGEYYHLDDLSDDSIVSAV  256 (261)
T ss_pred             EEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHH
T ss_conf             9955785233447999999739907865556404899988